BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 030395
         (178 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P80405|MTHFS_RABIT 5-formyltetrahydrofolate cyclo-ligase OS=Oryctolagus cuniculus
           GN=MTHFS PE=1 SV=1
          Length = 201

 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 84/158 (53%), Gaps = 19/158 (12%)

Query: 24  KRILRSQVRKTLKSMDPSLRSHEDNAIQKIVLEAPWFKSSQRLCAYISCSALREVDTSKL 83
           KR LR+++++ L+++    R      + + V+    ++ SQR+  ++S     E++T ++
Sbjct: 10  KRSLRAELKQRLRAISAEERLRCQRLLTQKVIAHRQYQKSQRISIFLSMPD--EIETEEI 67

Query: 84  LSQILQIPNADGDTKTRKKLYVPRVEDKNSHMRMFHISSIDDLIA---NSMNILEPAPVD 140
           +  I Q           K  ++PR   +++HM M  ++S D++ +    S NI +P+  D
Sbjct: 68  IKDIFQ---------QGKVCFIPRYRLQSNHMDMVKLASADEISSLPKTSWNIHQPSESD 118

Query: 141 ADGNEREDVMQANEPVDLFLLPGLAFDRSGRRLGRGGG 178
                RE+ + A   +DL  +PGL FDR+G RLGRG G
Sbjct: 119 T----REEAL-ATGGLDLIFMPGLGFDRNGNRLGRGRG 151


>sp|P49914|MTHFS_HUMAN 5-formyltetrahydrofolate cyclo-ligase OS=Homo sapiens GN=MTHFS PE=1
           SV=2
          Length = 203

 Score = 68.2 bits (165), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 80/158 (50%), Gaps = 19/158 (12%)

Query: 24  KRILRSQVRKTLKSMDPSLRSHEDNAIQKIVLEAPWFKSSQRLCAYISCSALREVDTSKL 83
           KR LR ++++ L++M    R  +   + + V+    ++ S+R+  ++S     E++T ++
Sbjct: 10  KRSLRGELKQRLRAMSAEERLRQSRVLSQKVIAHSEYQKSKRISIFLSMQD--EIETEEI 67

Query: 84  LSQILQIPNADGDTKTRKKLYVPRVEDKNSHMRMFHISS---IDDLIANSMNILEPAPVD 140
           +  I Q           K  ++PR   +++HM M  I S   I  L   S NI +P    
Sbjct: 68  IKDIFQ---------RGKICFIPRYRFQSNHMDMVRIESPEEISLLPKTSWNIPQPG--- 115

Query: 141 ADGNEREDVMQANEPVDLFLLPGLAFDRSGRRLGRGGG 178
            +G+ RE+ +     +DL  +PGL FD+ G RLGRG G
Sbjct: 116 -EGDVREEALSTG-GLDLIFMPGLGFDKHGNRLGRGKG 151


>sp|Q9D110|MTHFS_MOUSE 5-formyltetrahydrofolate cyclo-ligase OS=Mus musculus GN=Mthfs PE=2
           SV=2
          Length = 203

 Score = 66.2 bits (160), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 84/158 (53%), Gaps = 19/158 (12%)

Query: 24  KRILRSQVRKTLKSMDPSLRSHEDNAIQKIVLEAPWFKSSQRLCAYISCSALREVDTSKL 83
           KR LR+++++ L+++    R  +   + + V+    +++S+R+  ++S     EV+T  +
Sbjct: 10  KRGLRAELKQRLRALSAEERLRQSLLLTQKVIAHNQYQNSKRISIFLSMQD--EVETEVI 67

Query: 84  LSQILQIPNADGDTKTRKKLYVPRVEDKNSHMRMFHISSIDD---LIANSMNILEPAPVD 140
           +  I          K  K  ++PR + +++HM M  ++S ++   L   S NI +P    
Sbjct: 68  IKDIF---------KQGKICFIPRYQFQSNHMDMVRLTSSEEIALLPKTSWNIHQPG--- 115

Query: 141 ADGNEREDVMQANEPVDLFLLPGLAFDRSGRRLGRGGG 178
            +G+ RE+ +     +DL  LPGL FD+ G RLGRG G
Sbjct: 116 -EGDVREEALSTG-GLDLIFLPGLGFDKDGNRLGRGKG 151


>sp|Q9XWE6|MTHFS_CAEEL Probable 5-formyltetrahydrofolate cyclo-ligase OS=Caenorhabditis
           elegans GN=Y106G6E.4 PE=3 SV=1
          Length = 206

 Score = 62.0 bits (149), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 78/159 (49%), Gaps = 23/159 (14%)

Query: 27  LRSQVRKTLKSMDPSLRSHEDN----AIQKIVLEAPWFKSSQRLCAYISCSALREVDTSK 82
           ++S++R+ +K++   +   E      A+ + ++E+ WF+ S+RL  Y+S S   E+ T  
Sbjct: 7   VKSELRQFMKTLLGKISKEETQRQTEAVFEKIIESKWFQESKRLSVYVSTSG--EIQTDS 64

Query: 83  LLSQILQIPNADGDTKTRKKLYVPRVEDKNSHMRMFHI---SSIDDLIANSMNILEPAPV 139
           ++ + L++          K++++P+    ++ M M  +   ++ D+L +    I +P P 
Sbjct: 65  IIQKALEM---------GKEVFIPQFTKGSTAMDMVRVPDQTAFDNLPSTLWGIRQPEP- 114

Query: 140 DADGNEREDVMQANEPVDLFLLPGLAFDRSGRRLGRGGG 178
                 +        P+DL L PG+AF   G R G G G
Sbjct: 115 ----KWKWQSYHETGPLDLILAPGVAFSPYGLRCGHGKG 149


>sp|Q9P7W2|FTHC_SCHPO Probable 5-formyltetrahydrofolate cyclo-ligase
           OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
           GN=SPBC1703.08c PE=3 SV=1
          Length = 204

 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 72/157 (45%), Gaps = 24/157 (15%)

Query: 28  RSQVRKTLKSMDPSLRSH----EDNAIQKIVLEAPWFKSSQRLCAYISCSALREVDTSKL 83
           ++Q+R  L S    L  H    +  +I K V+E P +K  + +C Y++    +EV T  L
Sbjct: 5   KNQLRAILNSSLGKLADHIIDSQSISICKQVVELPEWKRCKNVCLYMNMPK-KEVRTRCL 63

Query: 84  LSQILQIPNADGDTKTRKKLYVPRVEDKNSH-MRMFHI-SSIDDLIANSMNILEPAPVDA 141
           +         D   K  K +++P+     SH M M+ +    + L  N   I EP     
Sbjct: 64  I---------DVAFKEGKNVFIPKC--IGSHVMEMYQVFEKTESLTINKWGIAEP----- 107

Query: 142 DGNEREDVMQANEPVDLFLLPGLAFDRSGRRLGRGGG 178
           +G  R+ +M      +L ++PG+AFD    RLG G G
Sbjct: 108 NGESRK-IMDDETDCELIIVPGVAFDEKLSRLGHGKG 143


>sp|P40099|FTHC_YEAST 5-formyltetrahydrofolate cyclo-ligase OS=Saccharomyces cerevisiae
           (strain ATCC 204508 / S288c) GN=FAU1 PE=1 SV=1
          Length = 211

 Score = 47.8 bits (112), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 27/167 (16%)

Query: 24  KRILRSQVRKTLKSMDPSLRSHEDNAIQKIVLEAPWFKSSQRLCAYISCSALREVDTSKL 83
           K++LR Q+++ + ++D  + + E + I + V       +S+R+  Y+S     EV T ++
Sbjct: 4   KQLLRRQIKRVINALDYDIIAAESHTISQAVRSLIASANSRRVACYMSMDK-GEVTTGEI 62

Query: 84  LSQILQIPNADGD-------TKTRKKLYVPRVEDKNSHM---RMFHISSIDDLIANS-MN 132
           +  + Q    DG        T T +  +    ED + H+   RM  +  + DL       
Sbjct: 63  IKNLFQ----DGQEVFLPRCTHTSESKHFKLREDHHPHLIFHRMSSLKMVRDLKPQGPYQ 118

Query: 133 ILEPAPVDADGNEREDVMQANEPVDLFLLPGLAFD-RSGRRLGRGGG 178
           + EP P      E  D++      D+ L+PG+AFD ++G R+G G G
Sbjct: 119 LKEPEP----HIEESDIL------DVVLVPGVAFDIKTGARMGHGAG 155


>sp|Q89AD6|Y370_BUCBP Uncharacterized protein bbp_370 OS=Buchnera aphidicola subsp.
           Baizongia pistaciae (strain Bp) GN=bbp_370 PE=3 SV=1
          Length = 195

 Score = 47.0 bits (110), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 21/153 (13%)

Query: 28  RSQVRKTLKSMDPSLRSHEDNAIQKIVLEAPWFKSSQRLCAYISCSALREVDTSKLLSQI 87
           R   RK  K ++  +R     +I K +       S + +   I CS   E+DT  L+ ++
Sbjct: 10  RKYFRKLRKKINNKIREQLAISISKKIFYCNILDSVKNIA--IFCSFDGEIDTYPLILKL 67

Query: 88  LQIPNADGDTKTRKKLYVPRVEDKNSHMRMF--HISSIDDLIANSMNILEPAPVDADGNE 145
                     +    +Y+P +      +  F  ++ +   LI N  NILEP        +
Sbjct: 68  ---------WRQNYNVYLPIINYNYKKILGFMKYLPN-TSLIKNRFNILEPV------FD 111

Query: 146 REDVMQANEPVDLFLLPGLAFDRSGRRLGRGGG 178
           R++ +Q+++ +D+  +P +AFD  G RLG GGG
Sbjct: 112 RKNFIQSDD-LDIMFVPLVAFDEFGYRLGMGGG 143


>sp|Q8K9E3|Y396_BUCAP Uncharacterized protein BUsg_396 OS=Buchnera aphidicola subsp.
           Schizaphis graminum (strain Sg) GN=BUsg_396 PE=3 SV=1
          Length = 199

 Score = 45.1 bits (105), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 29/163 (17%)

Query: 22  QQKRILRSQVRKTLKSMDPSLRSHEDNAIQKIVLEAPWFKSSQRLCAYISCSALREVDTS 81
           Q ++ +RS +R    S+  + +  E N I +         +++ +  ++S     E++T 
Sbjct: 7   QNRKEIRSYIRIVRNSVTLTKKYDESNKIVRTAFNCNIIYNAKNIACFLSFDG--EINTY 64

Query: 82  KLLSQILQIPNAD------GDTKTRKKLYVPRVEDKNSHMRMFHISSIDDLIANSMNILE 135
            L+ + L + N +        + +RK  +VP           F   SI  L  N  NIL+
Sbjct: 65  PLILK-LWLNNKNVFLPIVSSSYSRKLFFVP-----------FTCKSI--LYYNQYNILQ 110

Query: 136 PAPVDADGNEREDVMQANEPVDLFLLPGLAFDRSGRRLGRGGG 178
           P       N ++ +++++  +DL ++P +AFD  G RLG GGG
Sbjct: 111 PF-----YNMKDIILESD--LDLIIVPLVAFDCRGVRLGMGGG 146


>sp|P44905|Y858_HAEIN Uncharacterized protein HI_0858 OS=Haemophilus influenzae (strain
           ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_0858 PE=1 SV=1
          Length = 187

 Score = 41.6 bits (96), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 21/159 (13%)

Query: 22  QQKRILRSQVRKTLKSMDPSLRSHEDNAIQKIVLEAPWFKSSQRLCAYISCSALREVDTS 81
           Q+++ +R+++RK   ++    +   + ++ +  L     + ++ +  Y S     E+ T 
Sbjct: 4   QKRQQIRTEIRKIRANLTALQQHQAEQSVTQHALNLIEQRQAKNIALYFSFDG--EIST- 60

Query: 82  KLLSQILQIPNADGDTKTRKKLYVPRVEDKNSHMRMFHISSIDD--LIANSMNILEPAPV 139
           K L Q L + N        K +Y+P +     H  +F +  + D  +  N   I EP   
Sbjct: 61  KALIQSLWMQN--------KNVYLPVLHPFTKHYLLF-LRYLPDTPMKQNQFGIWEPKL- 110

Query: 140 DADGNEREDVMQANEPVDLFLLPGLAFDRSGRRLGRGGG 178
                  ++V+  NE +D+   P +AFD+ G RLG GGG
Sbjct: 111 -----NVQNVLPLNE-LDILFTPLVAFDKKGNRLGMGGG 143


>sp|P0AC28|YGFA_ECOLI Uncharacterized protein YgfA OS=Escherichia coli (strain K12)
           GN=ygfA PE=1 SV=1
          Length = 182

 Score = 38.1 bits (87), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 17/103 (16%)

Query: 77  EVDTSKLLSQILQIPNADGDTKTRKKLYVPRVEDKNSHMRMF-HISSIDDLIANSMNILE 135
           E+DT  L+ Q+          +  K++Y+P +   ++   +F +     +L+ N + I E
Sbjct: 46  ELDTQPLIEQLW---------RAGKRVYLPVLHPFSAGNLLFLNYHPQSELVMNRLKIHE 96

Query: 136 PAPVDADGNEREDVMQANEPVDLFLLPGLAFDRSGRRLGRGGG 178
           P  +D       DV+  +  +D+ + P +AFD  G+RLG GGG
Sbjct: 97  PK-LDV-----RDVLPLSR-LDVLITPLVAFDEYGQRLGMGGG 132


>sp|P0AC29|YGFA_ECO57 Uncharacterized protein YgfA OS=Escherichia coli O157:H7 GN=ygfA
           PE=3 SV=1
          Length = 182

 Score = 38.1 bits (87), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 17/103 (16%)

Query: 77  EVDTSKLLSQILQIPNADGDTKTRKKLYVPRVEDKNSHMRMF-HISSIDDLIANSMNILE 135
           E+DT  L+ Q+          +  K++Y+P +   ++   +F +     +L+ N + I E
Sbjct: 46  ELDTQPLIEQLW---------RAGKRVYLPVLHPFSAGNLLFLNYHPQSELVMNRLKIHE 96

Query: 136 PAPVDADGNEREDVMQANEPVDLFLLPGLAFDRSGRRLGRGGG 178
           P  +D       DV+  +  +D+ + P +AFD  G+RLG GGG
Sbjct: 97  PK-LDV-----RDVLPLSR-LDVLITPLVAFDEYGQRLGMGGG 132


>sp|P54491|YQGN_BACSU Uncharacterized protein YqgN OS=Bacillus subtilis (strain 168)
           GN=yqgN PE=1 SV=1
          Length = 187

 Score = 37.0 bits (84), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 9/79 (11%)

Query: 101 KKLYVPRVEDKNSHMRMFHISSIDDLIANSMNILEPAPVDADGNEREDVMQAN-EPVDLF 159
           K++ +P+       M+     + D L      +LEP          E   + N   +DL 
Sbjct: 68  KQVCIPKCHPDTKKMQFRTYQTDDQLETVYAGLLEPV--------IEKTKEVNPSQIDLM 119

Query: 160 LLPGLAFDRSGRRLGRGGG 178
           ++PG+ FD +G R+G GGG
Sbjct: 120 IVPGVCFDVNGFRVGFGGG 138


>sp|Q5UQ69|YL504_MIMIV Uncharacterized protein L504 OS=Acanthamoeba polyphaga mimivirus
           GN=MIMI_L504 PE=4 SV=1
          Length = 406

 Score = 32.3 bits (72), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 3/74 (4%)

Query: 102 KLYVPRVEDKNSHMRMFHISSIDDLIANSMNILEPAPVDADGNEREDVMQANEPVDLFLL 161
           + ++    D N  +R F I SI+DLI  S N LE  P+  +    ED+++A E +D +  
Sbjct: 194 RYFIFSYIDSNDKIRCFTIMSINDLI--SHNNLE-HPITMEKIPEEDILRAIELIDFYKK 250

Query: 162 PGLAFDRSGRRLGR 175
               F+ S   + R
Sbjct: 251 EIGLFNSSNMEISR 264


>sp|Q80U70|SUZ12_MOUSE Polycomb protein Suz12 OS=Mus musculus GN=Suz12 PE=1 SV=2
          Length = 741

 Score = 32.3 bits (72), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 11/96 (11%)

Query: 82  KLLSQILQIPNADGDTKTRKKLYVP-------RVEDKNSHMRMFHISSIDDLIANSMNIL 134
           ++  Q L   N    T+ R  L+ P       ++     H+++ H       I N +   
Sbjct: 429 RIFYQFLYNNNTRQQTEARDDLHCPWCTLNCRKLYSLLKHLKLCH----SRFIFNYVYHP 484

Query: 135 EPAPVDADGNEREDVMQANEPVDLFLLPGLAFDRSG 170
           + A +D   NE  D   A  P D+   PG AF R+G
Sbjct: 485 KGARIDVSINECYDGSYAGNPQDIHRQPGFAFSRNG 520


>sp|Q15022|SUZ12_HUMAN Polycomb protein SUZ12 OS=Homo sapiens GN=SUZ12 PE=1 SV=3
          Length = 739

 Score = 32.0 bits (71), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 11/96 (11%)

Query: 82  KLLSQILQIPNADGDTKTRKKLYVP-------RVEDKNSHMRMFHISSIDDLIANSMNIL 134
           ++  Q L   N    T+ R  L+ P       ++     H+++ H       I N +   
Sbjct: 427 RIFYQFLYNNNTRQQTEARDDLHCPWCTLNCRKLYSLLKHLKLCH----SRFIFNYVYHP 482

Query: 135 EPAPVDADGNEREDVMQANEPVDLFLLPGLAFDRSG 170
           + A +D   NE  D   A  P D+   PG AF R+G
Sbjct: 483 KGARIDVSINECYDGSYAGNPQDIHRQPGFAFSRNG 518


>sp|Q0VA03|SUZ12_XENTR Polycomb protein suz12 OS=Xenopus tropicalis GN=suz12 PE=2 SV=1
          Length = 700

 Score = 32.0 bits (71), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 11/96 (11%)

Query: 82  KLLSQILQIPNADGDTKTRKKLYVP-------RVEDKNSHMRMFHISSIDDLIANSMNIL 134
           ++  Q L   N    T+ R  L+ P       ++     H+++ H       I N +   
Sbjct: 384 RIFYQFLYNNNTRQQTEARDDLHCPWCTLNCRKLYSLLKHLKLCH----SRFIFNYVYHP 439

Query: 135 EPAPVDADGNEREDVMQANEPVDLFLLPGLAFDRSG 170
           + A +D   NE  D   A  P D+   PG AF R+G
Sbjct: 440 KGARIDVSINECYDGSYAGNPQDIHRQPGFAFSRNG 475


>sp|P25870|CLH_DICDI Clathrin heavy chain OS=Dictyostelium discoideum GN=chcA PE=1 SV=1
          Length = 1694

 Score = 31.6 bits (70), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 2/68 (2%)

Query: 29   SQVRKTLKS-MDPSLRSHEDNAIQKIVLEAPWFKSSQRLCAYISCSALREVDTSKLLSQI 87
            ++V  T+K+ MD +L +     ++KIVLE   FK+++ L   +  +A+R  D S++   I
Sbjct: 987  TEVSATVKAFMDANLPNELIELLEKIVLEGKEFKTAKELQNLLILTAIR-ADKSRVTDYI 1045

Query: 88   LQIPNADG 95
             ++ N DG
Sbjct: 1046 NRLDNFDG 1053


>sp|A5GHS5|CLPX_SYNPW ATP-dependent Clp protease ATP-binding subunit ClpX
           OS=Synechococcus sp. (strain WH7803) GN=clpX PE=3 SV=1
          Length = 451

 Score = 30.0 bits (66), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 8/79 (10%)

Query: 14  EHDLESIFQQKRILRSQVRKTLKSMDPSLRSHEDNAIQKIVLEAPWFKSSQRLCAYISCS 73
           EH LESI  + R    +  +TL SMD      E +AI+ I  EA   K+  R        
Sbjct: 346 EHALESILTEPRDALVKQFRTLLSMDNVQLEFEPSAIEAIAQEAHRRKTGAR-------- 397

Query: 74  ALREVDTSKLLSQILQIPN 92
           ALR +    +L  + ++P+
Sbjct: 398 ALRGIVEELMLDLMYELPS 416


>sp|Q7V9L5|CLPX_PROMA ATP-dependent Clp protease ATP-binding subunit ClpX
           OS=Prochlorococcus marinus (strain SARG / CCMP1375 /
           SS120) GN=clpX PE=3 SV=1
          Length = 450

 Score = 30.0 bits (66), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 8/78 (10%)

Query: 17  LESIFQQKRILRSQVRKTLKSMDPSLRSHEDNAIQKIVLEAPWFKSSQRLCAYISCSALR 76
           LE+I Q+ R    +   TL SMD    + E+NAI+ I  EA   K+  R        ALR
Sbjct: 346 LEAILQEPRDAVIKQFITLMSMDNVKLTFEENAIKSIAKEAFRRKTGAR--------ALR 397

Query: 77  EVDTSKLLSQILQIPNAD 94
            +    +L  + ++P+ D
Sbjct: 398 GIVEELMLELMYKLPSQD 415


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.315    0.131    0.369 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,094,091
Number of Sequences: 539616
Number of extensions: 2463982
Number of successful extensions: 6076
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 6060
Number of HSP's gapped (non-prelim): 28
length of query: 178
length of database: 191,569,459
effective HSP length: 110
effective length of query: 68
effective length of database: 132,211,699
effective search space: 8990395532
effective search space used: 8990395532
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)