AmiGO: BLAST Results


BLAST match view associations BLAST with AT3G09720 AT3G09720 AT3G09720	protein from Arabidopsis thaliana	2.1e-61
BLAST match view associations BLAST with ddx52 ddx52 ddx52 DEAD/DEAH box helicase	gene from Dictyostelium discoideum	1.8e-34
BLAST match view associations BLAST with ROK1 ROK1 ROK1 RNA-dependent ATPase	gene from Saccharomyces cerevisiae	5.4e-33
BLAST match view associations BLAST with CG5589 CG5589 CG5589	protein from Drosophila melanogaster	1.6e-28
BLAST match view associations BLAST with ddx52 ddx52 ddx52 DEAD (Asp-Glu-Ala-Asp) box polypeptide 52	gene_product from Danio rerio	3.6e-28
BLAST match view associations BLAST with Ddx52 Ddx52 Ddx52 DEAD (Asp-Glu-Ala-Asp) box polypeptide 52	gene from Rattus norvegicus	7.1e-27
BLAST match view associations BLAST with DDX52 DDX52 DDX52 Probable ATP-dependent RNA helicase DDX52	protein from Bos taurus	9.1e-27
BLAST match view associations BLAST with DDX52 DDX52 DDX52 Uncharacterized protein	protein from Sus scrofa	9.8e-27
BLAST match view associations BLAST with Ddx52 Ddx52 Ddx52 DEAD (Asp-Glu-Ala-Asp) box polypeptide 52	protein from Mus musculus	1.2e-26
BLAST match view associations BLAST with DDX52 DDX52 DDX52 Uncharacterized protein	protein from Canis lupus familiaris	2.5e-26
BLAST match view associations BLAST with DDX52 DDX52 DDX52 Probable ATP-dependent RNA helicase DDX52	protein from Homo sapiens	3.0e-26
BLAST match view associations BLAST with DDX52 DDX52 DDX52 Probable ATP-dependent RNA helicase DDX52	protein from Homo sapiens	6.9e-26
BLAST match view associations BLAST with DDX52 DDX52 DDX52 Uncharacterized protein	protein from Canis lupus familiaris	1.1e-25
BLAST match view associations BLAST with DDX52 DDX52 DDX52 Uncharacterized protein	protein from Gallus gallus	1.9e-25
BLAST match view associations BLAST with DDX52 DDX52 DDX52 Uncharacterized protein	protein from Gallus gallus	2.5e-25
BLAST match view associations BLAST with R05D11.4 R05D11.4 R05D11.4	gene from Caenorhabditis elegans	4.1e-18
BLAST match view associations BLAST with DED1 DED1 DED1 ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase	gene from Saccharomyces cerevisiae	8.9e-17
BLAST match view associations BLAST with DBP1 DBP1 DBP1 Putative ATP-dependent RNA helicase of the DEAD-box protein family	gene from Saccharomyces cerevisiae	1.1e-15
BLAST match view associations BLAST with orf19.7392 orf19.7392 orf19.7392	gene_product from Candida albicans	4.4e-15
BLAST match view associations BLAST with AT2G47330 AT2G47330 AT2G47330	protein from Arabidopsis thaliana	5.4e-15
BLAST match view associations BLAST with CPS_1590 CPS_1590 CPS_1590 ATP-dependent RNA helicase, DEAD box family	protein from Colwellia psychrerythraea 34H	7.1e-15
BLAST match view associations BLAST with rhlE rhlE rhlE ATP-dependent RNA helicase	protein from Escherichia coli K-12	8.7e-14
BLAST match view associations BLAST with DDX42 DDX42 DDX42 ATP-dependent RNA helicase DDX42	protein from Gallus gallus	2.5e-13
BLAST match view associations BLAST with DDX42 DDX42 DDX42 ATP-dependent RNA helicase DDX42	protein from Gallus gallus	3.8e-13
BLAST match view associations BLAST with DDX42 DDX42 DDX42 ATP-dependent RNA helicase DDX42	protein from Gallus gallus	3.8e-13
BLAST match view associations BLAST with ddx42 ddx42 ddx42 DEAD/DEAH box helicase	gene from Dictyostelium discoideum	4.0e-13
BLAST match view associations BLAST with I3LHW0 I3LHW0 I3LHW0 Uncharacterized protein	protein from Sus scrofa	5.5e-13
BLAST match view associations BLAST with LOC100524536 LOC100524536 LOC100524536 Uncharacterized protein	protein from Sus scrofa	5.6e-13
BLAST match view associations BLAST with DDX42 DDX42 DDX42 Uncharacterized protein	protein from Bos taurus	6.3e-13
BLAST match view associations BLAST with PRP28 PRP28 PRP28 RNA helicase in the DEAD-box family	gene from Saccharomyces cerevisiae	6.4e-13
BLAST match view associations BLAST with DBP3 DBP3 DBP3 RNA-Dependent ATPase, member of DExD/H-box family	gene from Saccharomyces cerevisiae	1.1e-12
BLAST match view associations BLAST with CPS_0042 CPS_0042 CPS_0042 ATP-dependent RNA helicase, DEAD box family	protein from Colwellia psychrerythraea 34H	1.1e-12
BLAST match view associations BLAST with CPS_0042 CPS_0042 CPS_0042 ATP-dependent RNA helicase, DEAD box family	protein from Colwellia psychrerythraea 34H	1.1e-12
BLAST match view associations BLAST with DBP3 DBP3 DBP3	gene_product from Candida albicans	1.3e-12
BLAST match view associations BLAST with Ddx42 Ddx42 Ddx42 DEAD (Asp-Glu-Ala-Asp) box polypeptide 42	protein from Mus musculus	1.3e-12
BLAST match view associations BLAST with Ddx42 Ddx42 Ddx42 DEAD (Asp-Glu-Ala-Asp) box polypeptide 42	gene from Rattus norvegicus	1.3e-12
BLAST match view associations BLAST with DDX42 DDX42 DDX42 Uncharacterized protein	protein from Canis lupus familiaris	1.3e-12
BLAST match view associations BLAST with DDX42 DDX42 DDX42 ATP-dependent RNA helicase DDX42	protein from Homo sapiens	1.3e-12
BLAST match view associations BLAST with DDX42 DDX42 DDX42 Uncharacterized protein	protein from Sus scrofa	1.3e-12
BLAST match view associations BLAST with DDX42 DDX42 DDX42 ATP-dependent RNA helicase DDX42	protein from Pongo abelii	1.3e-12
BLAST match view associations BLAST with SO_1501 SO_1501 SO_1501 ATP-dependent RNA helicase DEAD box family	protein from Shewanella oneidensis MR-1	1.4e-12
BLAST match view associations BLAST with SO_1501 SO_1501 SO_1501 ATP-dependent RNA helicase, DEAD box family	protein from Shewanella oneidensis MR-1	1.4e-12
BLAST match view associations BLAST with ddx41 ddx41 ddx41 DEAD box protein abstrakt	gene from Dictyostelium discoideum	2.1e-12
BLAST match view associations BLAST with SO_2571 SO_2571 SO_2571 ATP-dependent RNA helicase DEAD box family	protein from Shewanella oneidensis MR-1	2.5e-12
BLAST match view associations BLAST with SO_2571 SO_2571 SO_2571 ATP-dependent RNA helicase, DEAD box family	protein from Shewanella oneidensis MR-1	2.5e-12
BLAST match view associations BLAST with vbh-1 vbh-1 vbh-1	gene from Caenorhabditis elegans	2.7e-12
BLAST match view associations BLAST with DDX53 DDX53 DDX53 Probable ATP-dependent RNA helicase DDX53	protein from Homo sapiens	3.2e-12
BLAST match view associations BLAST with rhlB rhlB rhlB ATP-dependent RNA helicase RhlB	protein from Vibrio cholerae O1 biovar El Tor str. N16961	3.5e-12
BLAST match view associations BLAST with VC_0305 VC_0305 VC_0305 ATP-dependent RNA helicase RhlB	protein from Vibrio cholerae O1 biovar El Tor	3.5e-12
BLAST match view associations BLAST with Rm62 Rm62 Rm62	protein from Drosophila melanogaster	5.0e-12
BLAST match view associations BLAST with rhlB rhlB rhlB RhlB	protein from Escherichia coli K-12	5.2e-12
BLAST match view associations BLAST with SO_1383 SO_1383 SO_1383 ATP-dependent RNA helicase, DEAD box family	protein from Shewanella oneidensis MR-1	5.5e-12
BLAST match view associations BLAST with ddx42 ddx42 ddx42 DEAD (Asp-Glu-Ala-Asp) box polypeptide 42	gene_product from Danio rerio	8.9e-12
BLAST match view associations BLAST with RGD1309586 RGD1309586 RGD1309586 similar to probable ATP-dependent RNA helicase - mouse	gene from Rattus norvegicus	9.2e-12
BLAST match view associations BLAST with D1Pas1 D1Pas1 D1Pas1 DNA segment, Chr 1, Pasteur Institute 1	protein from Mus musculus	9.2e-12
BLAST match view associations BLAST with DDX59 DDX59 DDX59 Uncharacterized protein	protein from Canis lupus familiaris	9.3e-12
BLAST match view associations BLAST with rhlB rhlB rhlB ATP-dependent RNA helicase RhlB	protein from Shewanella oneidensis MR-1	9.4e-12
BLAST match view associations BLAST with SO_0407 SO_0407 SO_0407 ATP-dependent RNA helicase, DEAD box family	protein from Shewanella oneidensis MR-1	9.4e-12
BLAST match view associations BLAST with helB2 helB2 helB2 putative U5 small nuclear ribonucleoprotein	gene from Dictyostelium discoideum	1.0e-11
BLAST match view associations BLAST with DDX59 DDX59 DDX59 Uncharacterized protein	protein from Canis lupus familiaris	1.1e-11
BLAST match view associations BLAST with rhlE rhlE rhlE ATP-dependent RNA helicase	protein from Coxiella burnetii RSA 493	1.1e-11
BLAST match view associations BLAST with CBU_0670 CBU_0670 CBU_0670 ATP-dependent RNA helicase RhlE, putative	protein from Coxiella burnetii RSA 493	1.1e-11
BLAST match view associations BLAST with AT5G63120 AT5G63120 AT5G63120	protein from Arabidopsis thaliana	1.3e-11
BLAST match view associations BLAST with ddx4 ddx4 ddx4 Probable ATP-dependent RNA helicase DDX4	protein from Pelophylax lessonae	1.3e-11
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Bos taurus	1.5e-11
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Sus scrofa	1.5e-11
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Canis lupus familiaris	1.5e-11
BLAST match view associations BLAST with DDX3X DDX3X DDX3X ATP-dependent RNA helicase DDX3X	protein from Homo sapiens	1.5e-11
BLAST match view associations BLAST with DDX3Y DDX3Y DDX3Y Uncharacterized protein	protein from Sus scrofa	1.5e-11
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Canis lupus familiaris	1.7e-11
BLAST match view associations BLAST with laf-1 laf-1 laf-1	gene from Caenorhabditis elegans	1.7e-11
BLAST match view associations BLAST with VC_A0768 VC_A0768 VC_A0768 ATP-dependent RNA helicase, DEAD box family	protein from Vibrio cholerae O1 biovar El Tor str. N16961	1.8e-11
BLAST match view associations BLAST with VC_A0768 VC_A0768 VC_A0768 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Vibrio cholerae O1 biovar El Tor	1.8e-11
BLAST match view associations BLAST with DDX3Y DDX3Y DDX3Y Uncharacterized protein	protein from Bos taurus	1.9e-11
BLAST match view associations BLAST with C46F11.4 C46F11.4 C46F11.4	gene from Caenorhabditis elegans	2.0e-11
BLAST match view associations BLAST with pl10 pl10 pl10	gene_product from Danio rerio	2.1e-11
BLAST match view associations BLAST with ddx3 ddx3 ddx3 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3	gene_product from Danio rerio	2.7e-11
BLAST match view associations BLAST with AT3G58510 AT3G58510 AT3G58510	protein from Arabidopsis thaliana	2.8e-11
BLAST match view associations BLAST with ddx23 ddx23 ddx23 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23	gene_product from Danio rerio	3.0e-11
BLAST match view associations BLAST with Ddx23 Ddx23 Ddx23 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23	gene from Rattus norvegicus	3.2e-11
BLAST match view associations BLAST with DDX23 DDX23 DDX23 DDX23 protein	protein from Bos taurus	3.2e-11
BLAST match view associations BLAST with DDX23 DDX23 DDX23 Uncharacterized protein	protein from Canis lupus familiaris	3.2e-11
BLAST match view associations BLAST with DDX23 DDX23 DDX23 Probable ATP-dependent RNA helicase DDX23	protein from Homo sapiens	3.2e-11
BLAST match view associations BLAST with Ddx3x Ddx3x Ddx3x DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked	protein from Mus musculus	3.2e-11
BLAST match view associations BLAST with Ddx3x Ddx3x Ddx3x DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	gene from Rattus norvegicus	3.2e-11
BLAST match view associations BLAST with PF10_0209 PF10_0209 PF10_0209 RNA helicase, putative	gene from Plasmodium falciparum	3.3e-11
BLAST match view associations BLAST with PF10_0209 PF10_0209 PF10_0209 RNA helicase, putative	protein from Plasmodium falciparum 3D7	3.3e-11
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Gallus gallus	3.8e-11
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Gallus gallus	3.8e-11
BLAST match view associations BLAST with DDX3Y DDX3Y DDX3Y ATP-dependent RNA helicase DDX3Y	protein from Homo sapiens	4.0e-11
BLAST match view associations BLAST with DDX3Y DDX3Y DDX3Y ATP-dependent RNA helicase DDX3Y	protein from Homo sapiens	4.0e-11
BLAST match view associations BLAST with RH20 RH20 RH20 RNA helicase 20	protein from Arabidopsis thaliana	4.2e-11
BLAST match view associations BLAST with Ddx59 Ddx59 Ddx59 DEAD (Asp-Glu-Ala-Asp) box polypeptide 59	protein from Mus musculus	4.7e-11
BLAST match view associations BLAST with Ddx3y Ddx3y Ddx3y DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 Y-linked	gene from Rattus norvegicus	5.1e-11
BLAST match view associations BLAST with Ddx3y Ddx3y Ddx3y DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked	protein from Mus musculus	5.2e-11
BLAST match view associations BLAST with VC1407 VC1407 VC1407 ATP-dependent RNA helicase RhlE	protein from Vibrio cholerae O1 biovar El Tor str. N16961	5.7e-11
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  030396
        (178 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2075034 - symbol:AT3G09720 species:3702 "Arabi...   628  2.1e-61   1
DICTYBASE|DDB_G0274325 - symbol:ddx52 "DEAD/DEAH box heli...   380  1.8e-34   1
SGD|S000003139 - symbol:ROK1 "RNA-dependent ATPase" speci...   363  5.4e-33   1
POMBASE|SPAC22F3.08c - symbol:rok1 "ATP-dependent RNA hel...   342  4.2e-31   1
FB|FBgn0036754 - symbol:CG5589 species:7227 "Drosophila m...   324  1.6e-28   1
ZFIN|ZDB-GENE-060623-1 - symbol:ddx52 "DEAD (Asp-Glu-Ala-...   321  3.6e-28   1
RGD|621743 - symbol:Ddx52 "DEAD (Asp-Glu-Ala-Asp) box pol...   309  7.1e-27   1
UNIPROTKB|A5D7C1 - symbol:DDX52 "Probable ATP-dependent R...   308  9.1e-27   1
UNIPROTKB|I3LJA0 - symbol:DDX52 "Uncharacterized protein"...   305  9.8e-27   1
MGI|MGI:1925644 - symbol:Ddx52 "DEAD (Asp-Glu-Ala-Asp) bo...   307  1.2e-26   1
UNIPROTKB|E2RB54 - symbol:DDX52 "Uncharacterized protein"...   304  2.5e-26   1
UNIPROTKB|A8MTP9 - symbol:DDX52 "Probable ATP-dependent R...   300  3.0e-26   1
UNIPROTKB|Q9Y2R4 - symbol:DDX52 "Probable ATP-dependent R...   300  6.9e-26   1
UNIPROTKB|J9P4L6 - symbol:DDX52 "Uncharacterized protein"...   298  1.1e-25   1
UNIPROTKB|E1C4M1 - symbol:DDX52 "Uncharacterized protein"...   296  1.9e-25   1
UNIPROTKB|F1NQA6 - symbol:DDX52 "Uncharacterized protein"...   295  2.5e-25   1
WB|WBGene00011032 - symbol:R05D11.4 species:6239 "Caenorh...   228  4.1e-18   1
SGD|S000005730 - symbol:DED1 "ATP-dependent DEAD (Asp-Glu...   216  8.9e-17   1
ASPGD|ASPL0000058969 - symbol:AN0944 species:162425 "Emer...   209  7.2e-16   1
SGD|S000006040 - symbol:DBP1 "Putative ATP-dependent RNA ...   206  1.1e-15   1
CGD|CAL0004832 - symbol:orf19.7392 species:5476 "Candida ...   201  4.4e-15   1
TAIR|locus:2065215 - symbol:AT2G47330 species:3702 "Arabi...   201  5.4e-15   1
TIGR_CMR|CPS_1590 - symbol:CPS_1590 "ATP-dependent RNA he...   196  7.1e-15   1
UNIPROTKB|P25888 - symbol:rhlE "ATP-dependent RNA helicas...   186  8.7e-14   1
UNIPROTKB|F1P0H1 - symbol:DDX42 "ATP-dependent RNA helica...   185  2.5e-13   1
UNIPROTKB|Q5F485 - symbol:DDX42 "ATP-dependent RNA helica...   185  3.8e-13   1
UNIPROTKB|F1NJ40 - symbol:DDX42 "ATP-dependent RNA helica...   185  3.8e-13   1
DICTYBASE|DDB_G0288501 - symbol:ddx42 "DEAD/DEAH box heli...   185  4.0e-13   1
UNIPROTKB|I3LHW0 - symbol:I3LHW0 "Uncharacterized protein...   181  5.5e-13   1
UNIPROTKB|F1SQ03 - symbol:LOC100524536 "Uncharacterized p...   181  5.6e-13   1
UNIPROTKB|E1BJD2 - symbol:DDX42 "Uncharacterized protein"...   183  6.3e-13   1
SGD|S000002651 - symbol:PRP28 "RNA helicase in the DEAD-b...   180  6.4e-13   1
SGD|S000003046 - symbol:DBP3 "RNA-Dependent ATPase, membe...   177  1.1e-12   1
UNIPROTKB|Q48AV0 - symbol:CPS_0042 "ATP-dependent RNA hel...   175  1.1e-12   1
TIGR_CMR|CPS_0042 - symbol:CPS_0042 "ATP-dependent RNA he...   175  1.1e-12   1
CGD|CAL0005460 - symbol:DBP3 species:5476 "Candida albica...   177  1.3e-12   1
MGI|MGI:1919297 - symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) bo...   180  1.3e-12   1
RGD|1304909 - symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box po...   180  1.3e-12   1
UNIPROTKB|E2RFF1 - symbol:DDX42 "Uncharacterized protein"...   180  1.3e-12   1
UNIPROTKB|Q86XP3 - symbol:DDX42 "ATP-dependent RNA helica...   180  1.3e-12   1
UNIPROTKB|F1RSJ7 - symbol:DDX42 "Uncharacterized protein"...   180  1.3e-12   1
UNIPROTKB|Q5R7D1 - symbol:DDX42 "ATP-dependent RNA helica...   180  1.3e-12   1
UNIPROTKB|Q8EGU0 - symbol:SO_1501 "ATP-dependent RNA heli...   175  1.4e-12   1
TIGR_CMR|SO_1501 - symbol:SO_1501 "ATP-dependent RNA heli...   175  1.4e-12   1
DICTYBASE|DDB_G0287361 - symbol:ddx41 "DEAD box protein a...   176  2.1e-12   1
UNIPROTKB|Q8EE19 - symbol:SO_2571 "ATP-dependent RNA heli...   173  2.5e-12   1
TIGR_CMR|SO_2571 - symbol:SO_2571 "ATP-dependent RNA heli...   173  2.5e-12   1
POMBASE|SPCC1795.11 - symbol:sum3 "translation initiation...   175  2.5e-12   1
WB|WBGene00006888 - symbol:vbh-1 species:6239 "Caenorhabd...   175  2.7e-12   1
UNIPROTKB|Q86TM3 - symbol:DDX53 "Probable ATP-dependent R...   174  3.2e-12   1
UNIPROTKB|Q9KV52 - symbol:rhlB "ATP-dependent RNA helicas...   171  3.5e-12   1
TIGR_CMR|VC_0305 - symbol:VC_0305 "ATP-dependent RNA heli...   171  3.5e-12   1
ASPGD|ASPL0000077157 - symbol:AN10557 species:162425 "Eme...   174  3.5e-12   1
FB|FBgn0003261 - symbol:Rm62 "Rm62" species:7227 "Drosoph...   173  5.0e-12   1
UNIPROTKB|P0A8J8 - symbol:rhlB "RhlB" species:83333 "Esch...   169  5.2e-12   1
TIGR_CMR|SO_1383 - symbol:SO_1383 "ATP-dependent RNA heli...   169  5.5e-12   1
ZFIN|ZDB-GENE-050706-53 - symbol:ddx42 "DEAD (Asp-Glu-Ala...   172  8.9e-12   1
RGD|1309586 - symbol:RGD1309586 "similar to probable ATP-...   170  9.2e-12   1
MGI|MGI:91842 - symbol:D1Pas1 "DNA segment, Chr 1, Pasteu...   170  9.2e-12   1
UNIPROTKB|E2R4Z9 - symbol:DDX59 "Uncharacterized protein"...   169  9.3e-12   1
UNIPROTKB|Q8EJQ5 - symbol:rhlB "ATP-dependent RNA helicas...   167  9.4e-12   1
TIGR_CMR|SO_0407 - symbol:SO_0407 "ATP-dependent RNA heli...   167  9.4e-12   1
DICTYBASE|DDB_G0277857 - symbol:helB2 "putative U5 small ...   127  1.0e-11   2
UNIPROTKB|E2R4Y9 - symbol:DDX59 "Uncharacterized protein"...   169  1.1e-11   1
UNIPROTKB|Q83DM8 - symbol:rhlE "ATP-dependent RNA helicas...   166  1.1e-11   1
TIGR_CMR|CBU_0670 - symbol:CBU_0670 "ATP-dependent RNA he...   166  1.1e-11   1
TAIR|locus:2162022 - symbol:AT5G63120 species:3702 "Arabi...   168  1.3e-11   1
UNIPROTKB|Q3MSQ8 - symbol:ddx4 "Probable ATP-dependent RN...   169  1.3e-11   1
UNIPROTKB|G5E631 - symbol:DDX3X "Uncharacterized protein"...   168  1.5e-11   1
UNIPROTKB|F1RX16 - symbol:DDX3X "Uncharacterized protein"...   168  1.5e-11   1
UNIPROTKB|J9P0V9 - symbol:DDX3X "Uncharacterized protein"...   168  1.5e-11   1
UNIPROTKB|O00571 - symbol:DDX3X "ATP-dependent RNA helica...   168  1.5e-11   1
UNIPROTKB|I3LDV0 - symbol:DDX3Y "Uncharacterized protein"...   168  1.5e-11   1
UNIPROTKB|E2RRQ7 - symbol:DDX3X "Uncharacterized protein"...   168  1.7e-11   1
WB|WBGene00002244 - symbol:laf-1 species:6239 "Caenorhabd...   168  1.7e-11   1
UNIPROTKB|Q9KLH6 - symbol:VC_A0768 "ATP-dependent RNA hel...   164  1.8e-11   1
TIGR_CMR|VC_A0768 - symbol:VC_A0768 "ATP-dependent RNA he...   164  1.8e-11   1
UNIPROTKB|D3IVZ2 - symbol:DDX3Y "Uncharacterized protein"...   167  1.9e-11   1
WB|WBGene00008119 - symbol:C46F11.4 species:6239 "Caenorh...   168  2.0e-11   1
ZFIN|ZDB-GENE-980526-150 - symbol:pl10 "pl10" species:795...   167  2.1e-11   1
ZFIN|ZDB-GENE-030131-1565 - symbol:ddx3 "DEAD (Asp-Glu-Al...   166  2.7e-11   1
TAIR|locus:2076351 - symbol:AT3G58510 species:3702 "Arabi...   165  2.8e-11   1
ZFIN|ZDB-GENE-030131-6215 - symbol:ddx23 "DEAD (Asp-Glu-A...   119  3.0e-11   2
RGD|1308685 - symbol:Ddx23 "DEAD (Asp-Glu-Ala-Asp) box po...   119  3.2e-11   2
UNIPROTKB|A6QLB2 - symbol:DDX23 "Uncharacterized protein"...   119  3.2e-11   2
UNIPROTKB|E2RTL6 - symbol:DDX23 "Uncharacterized protein"...   119  3.2e-11   2
UNIPROTKB|Q9BUQ8 - symbol:DDX23 "Probable ATP-dependent R...   119  3.2e-11   2
MGI|MGI:103064 - symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/Hi...   165  3.2e-11   1
RGD|1564771 - symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box po...   165  3.2e-11   1
GENEDB_PFALCIPARUM|PF10_0209 - symbol:PF10_0209 "RNA heli...   165  3.3e-11   1
UNIPROTKB|Q8IJI8 - symbol:PF10_0209 "RNA helicase, putati...   165  3.3e-11   1
UNIPROTKB|F1NIX2 - symbol:DDX3X "Uncharacterized protein"...   164  3.8e-11   1
UNIPROTKB|F1NIX1 - symbol:DDX3X "Uncharacterized protein"...   164  3.8e-11   1
UNIPROTKB|B4DXX7 - symbol:DDX3Y "Uncharacterized protein"...   164  4.0e-11   1
UNIPROTKB|O15523 - symbol:DDX3Y "ATP-dependent RNA helica...   164  4.0e-11   1
TAIR|locus:2035741 - symbol:RH20 "RNA helicase 20" specie...   162  4.2e-11   1
MGI|MGI:1915247 - symbol:Ddx59 "DEAD (Asp-Glu-Ala-Asp) bo...   163  4.7e-11   1
RGD|2314437 - symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box po...   163  5.1e-11   1
MGI|MGI:1349406 - symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) bo...   163  5.2e-11   1
UNIPROTKB|Q9KS53 - symbol:VC1407 "ATP-dependent RNA helic...   159  5.7e-11   1

WARNING:  Descriptions of 385 database sequences were not reported due to the
          limiting value of parameter V = 100.


>TAIR|locus:2075034 [details] [associations]
            symbol:AT3G09720 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009220
            "pyrimidine ribonucleotide biosynthetic process" evidence=RCA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723 EMBL:AC016661
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000242486 KO:K14779 OMA:NVMKQSG EMBL:BT005833
            EMBL:AK227326 IPI:IPI00542757 RefSeq:NP_187583.2 UniGene:At.40050
            ProteinModelPortal:Q84TG1 SMR:Q84TG1 STRING:Q84TG1 PaxDb:Q84TG1
            PRIDE:Q84TG1 EnsemblPlants:AT3G09720.1 GeneID:820129
            KEGG:ath:AT3G09720 KEGG:dosa:Os07t0647900-01 GeneFarm:1036
            TAIR:At3g09720 InParanoid:Q84TG1 PhylomeDB:Q84TG1
            ProtClustDB:CLSN2690529 Genevestigator:Q84TG1 GermOnline:AT3G09720
            Uniprot:Q84TG1
        Length = 541

 Score = 628 (226.1 bits), Expect = 2.1e-61, P = 2.1e-61
 Identities = 131/172 (76%), Positives = 144/172 (83%)

Query:     1 MKKELVRSTDLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKH 60
             M K LV++ D SK  CD+LISTP              S+VEYLVLDE+DKLFE  +LLK 
Sbjct:   244 MTKPLVKTADFSKLWCDVLISTPMRLKRAIKAKKIDLSKVEYLVLDESDKLFEQ-SLLKQ 302

Query:    61 IDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAG 120
             ID VVKACSNPSI+RSLFSATLPD VEELARSIMHDAVRVI+GRKNTASE++KQKLVFAG
Sbjct:   303 IDCVVKACSNPSIIRSLFSATLPDSVEELARSIMHDAVRVIIGRKNTASETVKQKLVFAG 362

Query:   121 SEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDL 172
             SEEGKLLALRQSFAESLNPPVLIFVQSK+RAKELY EL  ++IRAGVIHSDL
Sbjct:   363 SEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYDELKCENIRAGVIHSDL 414


>DICTYBASE|DDB_G0274325 [details] [associations]
            symbol:ddx52 "DEAD/DEAH box helicase" species:44689
            "Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0016887 "ATPase activity" evidence=ISS] [GO:0006200 "ATP
            catabolic process" evidence=ISS] [GO:0042254 "ribosome biogenesis"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0274325 GO:GO:0005524
            GO:GO:0005730 GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0003723
            EMBL:AAFI02000012 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HSSP:P10081 KO:K14779 RefSeq:XP_643949.1
            ProteinModelPortal:Q86IZ9 EnsemblProtists:DDB0234211 GeneID:8619377
            KEGG:ddi:DDB_G0274325 OMA:NGITSHE Uniprot:Q86IZ9
        Length = 668

 Score = 380 (138.8 bits), Expect = 1.8e-34, P = 1.8e-34
 Identities = 78/160 (48%), Positives = 105/160 (65%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
             DILI+TP              ++VEYLV DEADKLF+  N  + +D VV AC NP +   
Sbjct:   320 DILITTPLRLVYLIKENLLSLNKVEYLVFDEADKLFDK-NFQEQVDIVVTACQNPKLKIC 378

Query:    77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
             LFSAT+   VEEL  SIM + +++I+G +N A+ ++ QKL++ G EEGKLLA+RQ   + 
Sbjct:   379 LFSATMNQQVEELGHSIMKNPIKIIIGEQNAAAITVDQKLIYVGKEEGKLLAVRQLIQKG 438

Query:   137 LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             L PP+LIF QSK+RA +L+ EL FD I   VIHS+ +Q Q
Sbjct:   439 LEPPILIFTQSKERAHDLFQELIFDGINVDVIHSERTQFQ 478


>SGD|S000003139 [details] [associations]
            symbol:ROK1 "RNA-dependent ATPase" species:4932
            "Saccharomyces cerevisiae" [GO:0000447 "endonucleolytic cleavage in
            ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from
            tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
            evidence=IMP] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
            tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
            evidence=IMP] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=IDA] [GO:0030686
            "90S preribosome" evidence=IDA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
            evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
            [GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
            [GO:0048254 "snoRNA localization" evidence=IMP] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0000472 "endonucleolytic
            cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S
            rRNA, LSU-rRNA)" evidence=IMP] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000003139
            GO:GO:0005524 GO:GO:0005730 EMBL:BK006941 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:X85757
            GO:GO:0030686 GO:GO:0004004 GO:GO:0000447 GO:GO:0000472
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000480
            GeneTree:ENSGT00550000074863 HOGENOM:HOG000242486 KO:K14779
            OMA:NVMKQSG OrthoDB:EOG425926 EMBL:Z34901 EMBL:Z72693 PIR:S59649
            RefSeq:NP_011344.1 ProteinModelPortal:P45818 SMR:P45818
            DIP:DIP-5111N IntAct:P45818 MINT:MINT-483312 STRING:P45818
            PaxDb:P45818 PeptideAtlas:P45818 EnsemblFungi:YGL171W GeneID:852704
            KEGG:sce:YGL171W CYGD:YGL171w NextBio:972056 Genevestigator:P45818
            GermOnline:YGL171W GO:GO:0048254 Uniprot:P45818
        Length = 564

 Score = 363 (132.8 bits), Expect = 5.4e-33, P = 5.4e-33
 Identities = 74/161 (45%), Positives = 107/161 (66%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
             DI+ISTP              S+V++L+ DEADKLF+    ++  D ++ AC  PS+ ++
Sbjct:   251 DIIISTPLRLIDVVKNEALDLSKVKHLIFDEADKLFDK-TFVEQSDDILSACREPSLRKA 309

Query:    77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
             +FSAT+P  VEE+A+SIM D VRVI+G K  A+ +I+QKL+F G+EEGKL+A+RQ   E 
Sbjct:   310 MFSATIPSNVEEIAQSIMMDPVRVIIGHKEAANTNIEQKLIFCGNEEGKLIAIRQLVQEG 369

Query:   137 -LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
                PP++IF++S  RAK LY EL +D I   VIH++ +  Q
Sbjct:   370 EFKPPIIIFLESITRAKALYHELMYDRINVDVIHAERTALQ 410


>POMBASE|SPAC22F3.08c [details] [associations]
            symbol:rok1 "ATP-dependent RNA helicase Rok1
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
            "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
            [GO:0005730 "nucleolus" evidence=ISO] [GO:0005829 "cytosol"
            evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 PomBase:SPAC22F3.08c GO:GO:0005829 GO:GO:0005524
            EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000242486 KO:K14779
            PIR:T38183 RefSeq:NP_593033.1 ProteinModelPortal:Q09775
            STRING:Q09775 EnsemblFungi:SPAC22F3.08c.1 GeneID:2541786
            KEGG:spo:SPAC22F3.08c OMA:ERESINT OrthoDB:EOG425926
            NextBio:20802875 Uniprot:Q09775
        Length = 481

 Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
 Identities = 72/161 (44%), Positives = 104/161 (64%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
             D+ I TP               +VE+ V+DEAD+LFE G  ++  D ++ AC++ +I +S
Sbjct:   168 DMCIGTPMRLVQAIQTGLSF-EKVEFFVMDEADRLFEPG-FIEQTDHILSACTSSNICKS 225

Query:    77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
             LFSAT+P  VEELA+ +  D +R+IVG K+ A++SI Q+L+F GS+  K++ LRQ  +  
Sbjct:   226 LFSATIPSRVEELAKVVTVDPIRIIVGLKDAATDSIDQRLLFVGSDTSKIVILRQMISNG 285

Query:   137 -LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
              L P V+IFVQ  +RAK LY EL FD+I  GVIH +L Q +
Sbjct:   286 ELKPRVVIFVQDIERAKALYTELLFDEIHVGVIHGELPQAK 326


>FB|FBgn0036754 [details] [associations]
            symbol:CG5589 species:7227 "Drosophila melanogaster"
            [GO:0003729 "mRNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
            RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014296
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
            GeneTree:ENSGT00550000074863 KO:K14779 OMA:NVMKQSG
            RefSeq:NP_649009.1 ProteinModelPortal:Q9VVK8 SMR:Q9VVK8
            STRING:Q9VVK8 PRIDE:Q9VVK8 EnsemblMetazoa:FBtr0075170 GeneID:39979
            KEGG:dme:Dmel_CG5589 UCSC:CG5589-RA FlyBase:FBgn0036754
            InParanoid:Q9VVK8 OrthoDB:EOG4QBZMN PhylomeDB:Q9VVK8
            GenomeRNAi:39979 NextBio:816380 Bgee:Q9VVK8 Uniprot:Q9VVK8
        Length = 594

 Score = 324 (119.1 bits), Expect = 1.6e-28, P = 1.6e-28
 Identities = 72/164 (43%), Positives = 103/164 (62%)

Query:    17 DILISTPXXXXXXXXXX--XXXXSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
             DIL+STP                S VE+ VLDEAD+L E G  N  + +D +  ACSNP+
Sbjct:   241 DILVSTPNRVRFLLQQEPPLLDLSHVEWFVLDEADRLMEEGQNNFKEQLDDIYAACSNPT 300

Query:    73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
                + FSAT    V + A   + + VR+ +G +N+A+E+++Q+L+F GSE GKL+A+R  
Sbjct:   301 KCVAFFSATYTVPVAKWALRHLKNLVRITIGVQNSATETVQQELLFVGSEGGKLVAIRDL 360

Query:   133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
               + L PPVL+FVQSK+RAK+L+ EL +D I   VIH++ SQ Q
Sbjct:   361 VRQGLQPPVLVFVQSKERAKQLFEELLYDGINVDVIHAERSQHQ 404


>ZFIN|ZDB-GENE-060623-1 [details] [associations]
            symbol:ddx52 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
            52" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-060623-1
            GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 CTD:11056 HOVERGEN:HBG051332 KO:K14779
            OrthoDB:EOG4XKV6Q EMBL:BC117610 IPI:IPI00627696
            RefSeq:NP_001037780.1 UniGene:Dr.13799 ProteinModelPortal:Q1ECZ5
            STRING:Q1ECZ5 GeneID:407696 KEGG:dre:407696 NextBio:20818558
            Uniprot:Q1ECZ5
        Length = 606

 Score = 321 (118.1 bits), Expect = 3.6e-28, P = 3.6e-28
 Identities = 70/164 (42%), Positives = 102/164 (62%)

Query:    17 DILISTPXXXXXXXXXX--XXXXSRVEYLVLDEADKLFEVGN--LLKHIDPVVKACSNPS 72
             DIL++TP                S VE+LV+DE+DKLFE G     + +  +  ACS+P+
Sbjct:   289 DILVTTPNRLIYLLNQDPPAINLSSVEWLVVDESDKLFEDGKTGFREQLATIFLACSSPN 348

Query:    73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
             + R LFSAT    VE   +  + + V V +G +N+A+E+++Q+L+F GSE GK+LA+R  
Sbjct:   349 VRRVLFSATFATDVERWCKLNLDNLVSVSIGARNSAAETVEQQLLFVGSENGKILAMRNL 408

Query:   133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
               +   PPVL+FVQS DRA+ELY EL ++ I   VIH+D +Q Q
Sbjct:   409 IKQGFLPPVLVFVQSIDRARELYHELVYEGINVDVIHADRTQQQ 452


>RGD|621743 [details] [associations]
            symbol:Ddx52 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 52"
            species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=NAS]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
            "cellular_component" evidence=ND] [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0006364 "rRNA processing" evidence=TAS]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:621743
            GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
            eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
            CTD:11056 GeneTree:ENSGT00550000074863 HOGENOM:HOG000242486
            HOVERGEN:HBG051332 KO:K14779 OMA:NVMKQSG OrthoDB:EOG4XKV6Q
            EMBL:AB055628 IPI:IPI00201365 RefSeq:NP_445977.1 UniGene:Rn.18605
            ProteinModelPortal:Q99PT0 SMR:Q99PT0 PRIDE:Q99PT0
            Ensembl:ENSRNOT00000003600 GeneID:85432 KEGG:rno:85432
            InParanoid:Q99PT0 NextBio:617542 Genevestigator:Q99PT0
            GermOnline:ENSRNOG00000002612 Uniprot:Q99PT0
        Length = 598

 Score = 309 (113.8 bits), Expect = 7.1e-27, P = 7.1e-27
 Identities = 67/164 (40%), Positives = 103/164 (62%)

Query:    17 DILISTPXXXXXXXXXX--XXXXSRVEYLVLDEADKLFEVGN--LLKHIDPVVKACSNPS 72
             DIL++TP                + VE+LV+DE+DKLFE G       +  +  AC++P 
Sbjct:   288 DILVTTPNRLIYLLKQEPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSPK 347

Query:    73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
             + R++FSAT    VE+  +  + + V V +G +N+A E+++Q+L+F GSE GKLLA+R+ 
Sbjct:   348 VRRAMFSATFAYDVEQWCKLNLDNIVSVSIGARNSAVETVEQELLFVGSETGKLLAMREL 407

Query:   133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
               +  NPPVL+FVQS +RAKEL+ EL ++ I   VIH++ +Q Q
Sbjct:   408 VKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 451


>UNIPROTKB|A5D7C1 [details] [associations]
            symbol:DDX52 "Probable ATP-dependent RNA helicase DDX52"
            species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 EMBL:BC140501 IPI:IPI00692860
            RefSeq:NP_001096708.1 UniGene:Bt.51117 ProteinModelPortal:A5D7C1
            SMR:A5D7C1 PRIDE:A5D7C1 Ensembl:ENSBTAT00000013622 GeneID:510826
            KEGG:bta:510826 CTD:11056 GeneTree:ENSGT00550000074863
            HOGENOM:HOG000242486 HOVERGEN:HBG051332 InParanoid:A5D7C1 KO:K14779
            OMA:NVMKQSG OrthoDB:EOG4XKV6Q NextBio:20869637 ArrayExpress:A5D7C1
            Uniprot:A5D7C1
        Length = 596

 Score = 308 (113.5 bits), Expect = 9.1e-27, P = 9.1e-27
 Identities = 68/164 (41%), Positives = 101/164 (61%)

Query:    17 DILISTPXXXXXXXXXX--XXXXSRVEYLVLDEADKLFEVGN--LLKHIDPVVKACSNPS 72
             DIL++TP                + VE+LV+DE+DKLFE G       +  +  AC++  
Sbjct:   285 DILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHK 344

Query:    73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
             + R++FSAT    VE+  R  +   + V VG +N+A E+++Q+L+F GSE GKLLA+R+ 
Sbjct:   345 VKRAMFSATFAYDVEQWCRLNLDSVITVSVGARNSAVETVEQELLFVGSETGKLLAMREL 404

Query:   133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
               +  NPPVL+FVQS +RAKEL+ EL ++ I   VIH+D +Q Q
Sbjct:   405 VKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHADRTQQQ 448


>UNIPROTKB|I3LJA0 [details] [associations]
            symbol:DDX52 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00550000074863 OMA:NVMKQSG
            EMBL:FP565631 EMBL:FP312903 Ensembl:ENSSSCT00000024730
            Uniprot:I3LJA0
        Length = 507

 Score = 305 (112.4 bits), Expect = 9.8e-27, P = 9.8e-27
 Identities = 66/164 (40%), Positives = 102/164 (62%)

Query:    17 DILISTPXXXXXXXXXX--XXXXSRVEYLVLDEADKLFEVGN--LLKHIDPVVKACSNPS 72
             DIL++TP                + VE+LV+DE+DKLFE G       +  +  AC++  
Sbjct:   195 DILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHK 254

Query:    73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
             + R++FSAT    VE+  +  + + + V +G +N+A E+++Q+L+F GSE GKLLA+R+ 
Sbjct:   255 VKRAMFSATFAYDVEQWCKLNLDNVITVSIGARNSAVETVEQELLFVGSETGKLLAMREL 314

Query:   133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
               +  NPPVL+FVQS +RAKEL+ EL ++ I   VIH+D +Q Q
Sbjct:   315 VKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHADRTQQQ 358


>MGI|MGI:1925644 [details] [associations]
            symbol:Ddx52 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 52"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
            [GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 MGI:MGI:1925644 GO:GO:0005524
            GO:GO:0005730 GO:GO:0003723 EMBL:CH466556 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 CTD:11056
            GeneTree:ENSGT00550000074863 HOGENOM:HOG000242486
            HOVERGEN:HBG051332 KO:K14779 OMA:NVMKQSG OrthoDB:EOG4XKV6Q
            EMBL:AK080767 EMBL:AK133545 EMBL:AL645615 EMBL:BC029094
            IPI:IPI00336965 RefSeq:NP_084372.2 UniGene:Mm.280544
            ProteinModelPortal:Q8K301 SMR:Q8K301 STRING:Q8K301
            PhosphoSite:Q8K301 PaxDb:Q8K301 PRIDE:Q8K301
            Ensembl:ENSMUST00000049257 GeneID:78394 KEGG:mmu:78394
            InParanoid:Q3UZY9 NextBio:348796 Bgee:Q8K301 CleanEx:MM_DDX52
            Genevestigator:Q8K301 GermOnline:ENSMUSG00000020677 Uniprot:Q8K301
        Length = 598

 Score = 307 (113.1 bits), Expect = 1.2e-26, P = 1.2e-26
 Identities = 66/164 (40%), Positives = 103/164 (62%)

Query:    17 DILISTPXXXXXXXXXX--XXXXSRVEYLVLDEADKLFEVGN--LLKHIDPVVKACSNPS 72
             DIL++TP                + VE+LV+DE+DKLFE G     + +  +  AC++P 
Sbjct:   288 DILVTTPNRLIYLLKQDPPGIDLTNVEWLVVDESDKLFEDGKTGFREQLASIFLACTSPK 347

Query:    73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
             + R++FSAT    VE+  +  + + V V +G +N+A E+++Q+L+F GSE GKLLA+R+ 
Sbjct:   348 VRRAMFSATFAYDVEQWCKLNLDNVVSVSIGARNSAVETVEQELLFVGSETGKLLAMREL 407

Query:   133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
               +   PPVL+FVQS +RAKEL+ EL ++ I   VIH++ +Q Q
Sbjct:   408 VKKGFKPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 451


>UNIPROTKB|E2RB54 [details] [associations]
            symbol:DDX52 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00550000074863 OMA:ERESINT
            EMBL:AAEX03006616 Ensembl:ENSCAFT00000028820 Uniprot:E2RB54
        Length = 601

 Score = 304 (112.1 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 66/164 (40%), Positives = 102/164 (62%)

Query:    17 DILISTPXXXXXXXXXX--XXXXSRVEYLVLDEADKLFEVGN--LLKHIDPVVKACSNPS 72
             DIL++TP                + VE+LV+DE+DKLFE G       +  +  AC++  
Sbjct:   289 DILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHK 348

Query:    73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
             + R++FSAT    VE+  +  + + + V +G +N+A E+++Q+L+F GSE GKLLA+R+ 
Sbjct:   349 VRRAMFSATFAYDVEQWCKLNLDNVITVSIGARNSAVETVEQELLFVGSETGKLLAMREL 408

Query:   133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
               +  NPPVL+FVQS +RAKEL+ EL ++ I   VIH+D +Q Q
Sbjct:   409 VKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHADRTQQQ 452


>UNIPROTKB|A8MTP9 [details] [associations]
            symbol:DDX52 "Probable ATP-dependent RNA helicase DDX52"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000242486
            HOVERGEN:HBG051332 EMBL:AC091199 HGNC:HGNC:20038
            PharmGKB:PA134904836 ChiTaRS:DDX52 NextBio:42007 IPI:IPI00394982
            ProteinModelPortal:A8MTP9 SMR:A8MTP9 STRING:A8MTP9 PRIDE:A8MTP9
            Ensembl:ENST00000394367 ArrayExpress:A8MTP9 Bgee:A8MTP9
            Uniprot:A8MTP9
        Length = 491

 Score = 300 (110.7 bits), Expect = 3.0e-26, P = 3.0e-26
 Identities = 65/164 (39%), Positives = 102/164 (62%)

Query:    17 DILISTPXXXXXXXXXX--XXXXSRVEYLVLDEADKLFEVGN--LLKHIDPVVKACSNPS 72
             DIL++TP                + VE+LV+DE+DKLFE G       +  +  AC++  
Sbjct:   179 DILVTTPNRLIYLLKQDPPGIDLASVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHK 238

Query:    73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
             + R++FSAT    VE+  +  + + + V +G +N+A E+++Q+L+F GSE GKLLA+R+ 
Sbjct:   239 VRRAMFSATFAYDVEQWCKLNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAMREL 298

Query:   133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
               +  NPPVL+FVQS +RAKEL+ EL ++ I   VIH++ +Q Q
Sbjct:   299 VKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 342


>UNIPROTKB|Q9Y2R4 [details] [associations]
            symbol:DDX52 "Probable ATP-dependent RNA helicase DDX52"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 CTD:11056 HOGENOM:HOG000242486
            HOVERGEN:HBG051332 KO:K14779 OMA:NVMKQSG OrthoDB:EOG4XKV6Q
            EMBL:AF077033 EMBL:AK001652 EMBL:AK093661 EMBL:AC091199
            EMBL:BC041785 EMBL:AJ010840 IPI:IPI00032423 RefSeq:NP_008941.2
            UniGene:Hs.590937 PDB:3DKP PDBsum:3DKP ProteinModelPortal:Q9Y2R4
            SMR:Q9Y2R4 IntAct:Q9Y2R4 STRING:Q9Y2R4 PhosphoSite:Q9Y2R4
            DMDM:296439375 SWISS-2DPAGE:Q9Y2R4 PaxDb:Q9Y2R4 PRIDE:Q9Y2R4
            Ensembl:ENST00000349699 GeneID:11056 KEGG:hsa:11056 UCSC:uc002hoh.2
            GeneCards:GC17M035969 HGNC:HGNC:20038 MIM:612500 neXtProt:NX_Q9Y2R4
            PharmGKB:PA134904836 InParanoid:Q9Y2R4 PhylomeDB:Q9Y2R4
            ChiTaRS:DDX52 EvolutionaryTrace:Q9Y2R4 GenomeRNAi:11056
            NextBio:42007 ArrayExpress:Q9Y2R4 Bgee:Q9Y2R4 CleanEx:HS_DDX52
            Genevestigator:Q9Y2R4 GermOnline:ENSG00000141141 Uniprot:Q9Y2R4
        Length = 599

 Score = 300 (110.7 bits), Expect = 6.9e-26, P = 6.9e-26
 Identities = 65/164 (39%), Positives = 102/164 (62%)

Query:    17 DILISTPXXXXXXXXXX--XXXXSRVEYLVLDEADKLFEVGN--LLKHIDPVVKACSNPS 72
             DIL++TP                + VE+LV+DE+DKLFE G       +  +  AC++  
Sbjct:   287 DILVTTPNRLIYLLKQDPPGIDLASVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHK 346

Query:    73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
             + R++FSAT    VE+  +  + + + V +G +N+A E+++Q+L+F GSE GKLLA+R+ 
Sbjct:   347 VRRAMFSATFAYDVEQWCKLNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAMREL 406

Query:   133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
               +  NPPVL+FVQS +RAKEL+ EL ++ I   VIH++ +Q Q
Sbjct:   407 VKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 450


>UNIPROTKB|J9P4L6 [details] [associations]
            symbol:DDX52 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00550000074863 OMA:NVMKQSG
            EMBL:AAEX03026218 Ensembl:ENSCAFT00000021498 Uniprot:J9P4L6
        Length = 598

 Score = 298 (110.0 bits), Expect = 1.1e-25, P = 1.1e-25
 Identities = 65/164 (39%), Positives = 101/164 (61%)

Query:    17 DILISTPXXXXXXXXXX--XXXXSRVEYLVLDEADKLFEVGN--LLKHIDPVVKACSNPS 72
             DIL++TP                + VE+LV+DE+DKLFE G       +  +  AC++  
Sbjct:   286 DILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHK 345

Query:    73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
             + R++FSA     VE+  +  + + + V +G +N+A E+++Q+L+F GSE GKLLA+R+ 
Sbjct:   346 VRRAMFSAIFAYDVEQWCKLNLDNVITVSIGARNSAVETVEQELLFVGSETGKLLAMREL 405

Query:   133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
               +  NPPVL+FVQS +RAKEL+ EL ++ I   VIH+D +Q Q
Sbjct:   406 VKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHADRTQQQ 449


>UNIPROTKB|E1C4M1 [details] [associations]
            symbol:DDX52 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00550000074863 OMA:NVMKQSG
            EMBL:AADN02025730 IPI:IPI00593921 ProteinModelPortal:E1C4M1
            Ensembl:ENSGALT00000008815 ArrayExpress:E1C4M1 Uniprot:E1C4M1
        Length = 604

 Score = 296 (109.3 bits), Expect = 1.9e-25, P = 1.9e-25
 Identities = 69/168 (41%), Positives = 101/168 (60%)

Query:    13 KFSCDILISTPXXXXXXXXXX--XXXXSRVEYLVLDEADKLFEVGN--LLKHIDPVVKAC 68
             KF  DIL++TP                + VE+LV+DE+DKLFE G       +  +  AC
Sbjct:   279 KF-VDILVTTPNRLIYLLKQDPPAIDLTSVEWLVVDESDKLFEDGKSGFRDQLASIFLAC 337

Query:    69 SNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLA 128
             ++  + R+ FSAT    VEE  +  +   V V VG +N+A+E+++Q+L+F GSE GKL A
Sbjct:   338 TSHVVRRAFFSATFAHDVEEWCKLNLDSIVLVSVGARNSAAETVEQELLFVGSETGKLTA 397

Query:   129 LRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             +R+   +   PPVL+FVQS +RAKEL+ EL ++ I   VIH+D +Q Q
Sbjct:   398 MRELVKKGFAPPVLVFVQSIERAKELFHELIYEGINVDVIHADKTQQQ 445


>UNIPROTKB|F1NQA6 [details] [associations]
            symbol:DDX52 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00550000074863 EMBL:AADN02025730
            IPI:IPI00822952 Ensembl:ENSGALT00000039070 ArrayExpress:F1NQA6
            Uniprot:F1NQA6
        Length = 603

 Score = 295 (108.9 bits), Expect = 2.5e-25, P = 2.5e-25
 Identities = 67/164 (40%), Positives = 99/164 (60%)

Query:    17 DILISTPXXXXXXXXXX--XXXXSRVEYLVLDEADKLFEVGN--LLKHIDPVVKACSNPS 72
             DIL++TP                + VE+LV+DE+DKLFE G       +  +  AC++  
Sbjct:   281 DILVTTPNRLIYLLKQDPPAIDLTSVEWLVVDESDKLFEDGKSGFRDQLASIFLACTSHV 340

Query:    73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
             + R+ FSAT    VEE  +  +   V V VG +N+A+E+++Q+L+F GSE GKL A+R+ 
Sbjct:   341 VRRAFFSATFAHDVEEWCKLNLDSIVLVSVGARNSAAETVEQELLFVGSETGKLTAMREL 400

Query:   133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
               +   PPVL+FVQS +RAKEL+ EL ++ I   VIH+D +Q Q
Sbjct:   401 VKKGFAPPVLVFVQSIERAKELFHELIYEGINVDVIHADKTQQQ 444


>WB|WBGene00011032 [details] [associations]
            symbol:R05D11.4 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
            GeneTree:ENSGT00550000074863 HOGENOM:HOG000242486 KO:K14779
            OMA:NVMKQSG EMBL:Z75546 PIR:T23922 RefSeq:NP_492326.1
            ProteinModelPortal:Q21736 SMR:Q21736 STRING:Q21736 PaxDb:Q21736
            EnsemblMetazoa:R05D11.4.1 EnsemblMetazoa:R05D11.4.2 GeneID:172651
            KEGG:cel:CELE_R05D11.4 UCSC:R05D11.4 CTD:172651 WormBase:R05D11.4
            InParanoid:Q21736 NextBio:876429 Uniprot:Q21736
        Length = 581

 Score = 228 (85.3 bits), Expect = 4.1e-18, P = 4.1e-18
 Identities = 62/175 (35%), Positives = 93/175 (53%)

Query:     9 TDLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEV--GN---LLKHIDP 63
             TD+     DIL+STP              S + +LV+DE+D+LFEV  G        +  
Sbjct:   243 TDIQH--ADILVSTPNRIVFHLDKIDT--SSLRWLVVDESDRLFEVVEGQDKCFRNQLAA 298

Query:    64 VVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEE 123
             + KAC       + FSAT    VE+  +  + +   V VG +N+++ S+KQKL + G+E+
Sbjct:   299 IYKACDAKCTRVAFFSATFSHEVEKWCKENIDEIGMVCVGERNSSNTSVKQKLTYCGTED 358

Query:   124 GKLLALRQSFAESLNPPVLIFVQSKDRAKELYGEL-AFD-DIRAGVIHSDLSQTQ 176
             GK +A+R     S  PP L+FVQSKDRA +L   L A D +++   I+S  S  +
Sbjct:   359 GKKIAIRNLLRTSFKPPALVFVQSKDRAVQLVKLLSAIDSNLKVDSINSGKSDKE 413


>SGD|S000005730 [details] [associations]
            symbol:DED1 "ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA
            helicase" species:4932 "Saccharomyces cerevisiae" [GO:0006413
            "translational initiation" evidence=IEA;IMP] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IC]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=IMP;IDA]
            [GO:0033592 "RNA strand annealing activity" evidence=IDA]
            [GO:0003743 "translation initiation factor activity" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 SGD:S000005730 GO:GO:0005524 GO:GO:0005737
            EMBL:BK006948 GO:GO:0006413 GO:GO:0003743 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
            HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4 OMA:GNWANAN
            EMBL:X57278 EMBL:Z75110 EMBL:X03245 PIR:S13653 RefSeq:NP_014847.3
            RefSeq:NP_014849.3 ProteinModelPortal:P06634 SMR:P06634
            DIP:DIP-5820N IntAct:P06634 MINT:MINT-697363 STRING:P06634
            PaxDb:P06634 PeptideAtlas:P06634 EnsemblFungi:YOR204W GeneID:854379
            GeneID:854381 KEGG:sce:YOR204W KEGG:sce:YOR206W CYGD:YOR204w
            KO:K14833 SABIO-RK:P06634 NextBio:976514 Genevestigator:P06634
            GermOnline:YOR204W GO:GO:0033592 Uniprot:P06634
        Length = 604

 Score = 216 (81.1 bits), Expect = 8.9e-17, P = 8.9e-17
 Identities = 55/164 (33%), Positives = 89/164 (54%)

Query:    16 CDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS-NPSIV 74
             CD+L++TP              + V+YLVLDEAD++ ++G     I  +V+ C   P   
Sbjct:   276 CDLLVATPGRLNDLLERGKISLANVKYLVLDEADRMLDMG-FEPQIRHIVEDCDMTPVGE 334

Query:    75 RS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
             R   +FSAT P  ++ LAR  + D + + VGR  + SE+I QK+++  +++ K  AL   
Sbjct:   335 RQTLMFSATFPADIQHLARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKKS-ALLDL 393

Query:   133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
              + S +   LIFV++K  A +L   L   + RA  IH D +Q++
Sbjct:   394 LSASTDGLTLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSE 437


>ASPGD|ASPL0000058969 [details] [associations]
            symbol:AN0944 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005829 "cytosol" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005730 EMBL:BN001308
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 EMBL:AACD01000014 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000242486 KO:K14779
            RefSeq:XP_658548.1 ProteinModelPortal:Q5BET6
            EnsemblFungi:CADANIAT00001712 GeneID:2876717 KEGG:ani:AN0944.2
            OMA:WSATMGS OrthoDB:EOG4HQHT5 Uniprot:Q5BET6
        Length = 742

 Score = 209 (78.6 bits), Expect = 7.2e-16, P = 7.2e-16
 Identities = 66/191 (34%), Positives = 99/191 (51%)

Query:    17 DILISTPXXXXXXXXXXXX----XXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
             DIL+STP                    V  LVLDEAD L +     + +D + ++C++P 
Sbjct:   360 DILVSTPLQLVNALSDNKTKPLATLPLVRNLVLDEADVLLDPLFRDQTLD-IWRSCTHPE 418

Query:    73 IVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASESIKQKLVFAG 120
             +  SL+SAT+   +E++A++ + +             +R++VG K++A  +IK KLV+A 
Sbjct:   419 LRASLWSATMGSSIEDMAKTTIKERKLSLPQTKSYPLLRLVVGLKDSAIPNIKHKLVYAA 478

Query:   121 SEEGKLLALRQSFAES--------LNPPVLIFVQSKDRAKELYGELAFD-------DIRA 165
             +E+GKLL LRQ    +        L PP LIF Q+  RA  L+ EL +D         R 
Sbjct:   479 TEQGKLLGLRQLIHPTAATTSDVRLRPPFLIFTQTIPRAIALHSELLYDIPPEAGGSARI 538

Query:   166 GVIHSDLSQTQ 176
              V+HSDLS TQ
Sbjct:   539 AVLHSDLSDTQ 549


>SGD|S000006040 [details] [associations]
            symbol:DBP1 "Putative ATP-dependent RNA helicase of the
            DEAD-box protein family" species:4932 "Saccharomyces cerevisiae"
            [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006413
            "translational initiation" evidence=IEA;IMP] [GO:0003724 "RNA
            helicase activity" evidence=ISS] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003743
            "translation initiation factor activity" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 SGD:S000006040 GO:GO:0005524
            GO:GO:0005737 GO:GO:0006413 EMBL:BK006949 GO:GO:0003743 EMBL:U43503
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
            EMBL:X55993 PIR:S62003 RefSeq:NP_015206.1 ProteinModelPortal:P24784
            SMR:P24784 DIP:DIP-2576N IntAct:P24784 MINT:MINT-426870
            STRING:P24784 PaxDb:P24784 EnsemblFungi:YPL119C GeneID:855984
            KEGG:sce:YPL119C CYGD:YPL119c GeneTree:ENSGT00620000087942
            HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN OrthoDB:EOG4XPTQ4
            NextBio:980825 Genevestigator:P24784 GermOnline:YPL119C
            Uniprot:P24784
        Length = 617

 Score = 206 (77.6 bits), Expect = 1.1e-15, P = 1.1e-15
 Identities = 51/164 (31%), Positives = 85/164 (51%)

Query:    16 CDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
             CD+L++TP              + ++YLVLDEAD++ ++G     I  +V+ C  PS+  
Sbjct:   288 CDLLVATPGRLNDLLERGKVSLANIKYLVLDEADRMLDMG-FEPQIRHIVEECDMPSVEN 346

Query:    76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
                 +FSAT P  ++ LAR  + + + + VGR  + SE+I Q++++    + K   L   
Sbjct:   347 RQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVGSTSENITQRILYVDDMDKKSALLDLL 406

Query:   133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
              AE      LIFV++K  A +L   L   + +A  IH D +Q +
Sbjct:   407 SAEHKGL-TLIFVETKRMADQLTDFLIMQNFKATAIHGDRTQAE 449


>CGD|CAL0004832 [details] [associations]
            symbol:orf19.7392 species:5476 "Candida albicans" [GO:0005829
            "cytosol" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=IEA] [GO:0033592 "RNA strand annealing activity"
            evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
            [GO:0071470 "cellular response to osmotic stress" evidence=IEA]
            [GO:0031137 "regulation of conjugation with cellular fusion"
            evidence=IEA] [GO:2000765 "regulation of cytoplasmic translation"
            evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 CGD:CAL0004832 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003743 EMBL:AACQ01000066 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 KO:K11594 RefSeq:XP_716633.1
            ProteinModelPortal:Q5A4E2 SMR:Q5A4E2 PRIDE:Q5A4E2 GeneID:3641752
            KEGG:cal:CaO19.7392 Uniprot:Q5A4E2
        Length = 672

 Score = 201 (75.8 bits), Expect = 4.4e-15, P = 4.4e-15
 Identities = 53/162 (32%), Positives = 82/162 (50%)

Query:    16 CDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV- 74
             CD+L++TP              + + YLVLDEAD++ ++G     I  +V+ C  P++  
Sbjct:   320 CDLLVATPGRLKDLLDRGKVSLANIRYLVLDEADRMLDMG-FEPQIRYIVEECDMPAVKD 378

Query:    75 RS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
             R   +FSAT P  ++ LAR  + D V + VGR  + SE+I QK+++   +E K + L   
Sbjct:   379 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKILYVEDDEKKSVILDLL 438

Query:   133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
              A   N   ++F ++K  A  L   L      A  IH D SQ
Sbjct:   439 SANE-NGLTIVFTETKRMADNLADYLYDQGFPATAIHGDRSQ 479


>TAIR|locus:2065215 [details] [associations]
            symbol:AT2G47330 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0003723 EMBL:AC002337 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 UniGene:At.12226 UniGene:At.25582
            HOGENOM:HOG000268793 KO:K12835 EMBL:AY057700 EMBL:AY124871
            IPI:IPI00516775 PIR:H84913 RefSeq:NP_566099.1
            ProteinModelPortal:O22907 SMR:O22907 STRING:O22907 PaxDb:O22907
            PRIDE:O22907 EnsemblPlants:AT2G47330.1 GeneID:819346
            KEGG:ath:AT2G47330 GeneFarm:942 TAIR:At2g47330 InParanoid:O22907
            OMA:QEYANLM PhylomeDB:O22907 ProtClustDB:CLSN2688982
            Genevestigator:O22907 GermOnline:AT2G47330 Uniprot:O22907
        Length = 760

 Score = 201 (75.8 bits), Expect = 5.4e-15, P = 5.4e-15
 Identities = 53/166 (31%), Positives = 80/166 (48%)

Query:    13 KFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-- 70
             K  C+I+++TP               R  YLVLDEAD++F++G      +P V++     
Sbjct:   349 KAGCEIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFDLG-----FEPQVRSIVGQI 403

Query:    71 -PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 129
              P     LFSAT+P  VE+LAR I+ D +RV VG    A+E I Q +    S+  KL  L
Sbjct:   404 RPDRQTLLFSATMPWKVEKLAREILSDPIRVTVGEVGMANEDITQVVNVIPSDAEKLPWL 463

Query:   130 RQSFAESLNP-PVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
              +     ++   VL+F   K    E+  +L  +  +   +H D  Q
Sbjct:   464 LEKLPGMIDEGDVLVFASKKATVDEIEAQLTLNSFKVAALHGDKDQ 509


>TIGR_CMR|CPS_1590 [details] [associations]
            symbol:CPS_1590 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 RefSeq:YP_268332.1 ProteinModelPortal:Q485D3
            STRING:Q485D3 GeneID:3522084 KEGG:cps:CPS_1590 PATRIC:21466379
            OMA:AISECGY ProtClustDB:CLSK768209
            BioCyc:CPSY167879:GI48-1671-MONOMER Uniprot:Q485D3
        Length = 455

 Score = 196 (74.1 bits), Expect = 7.1e-15, P = 7.1e-15
 Identities = 52/171 (30%), Positives = 87/171 (50%)

Query:     4 ELVRSTDLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDP 63
             ++   T + K   D+L++TP              S+V++LVLDEAD++ ++G  L  I+ 
Sbjct:   130 KMASQTKMLKQGLDVLVATPGRLLEHLALRNVDLSQVKFLVLDEADRMLDMG-FLTDIEK 188

Query:    64 VVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEE 123
             ++ A  +      +FSAT  D V+ LA  ++     + V ++NT S  IKQ + +  +EE
Sbjct:   189 LLLAVKHKHQTL-MFSATFSDRVKSLANQLLKSPKTISVSKENTTSGKIKQAVYWV-TEE 246

Query:   124 GKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
              K   L +    +    VL+F  +K+ A  L  EL  D I+A + H D +Q
Sbjct:   247 RKRELLSELIGVNNWQQVLVFAGTKESANTLAKELKLDGIKAALCHGDKTQ 297


>UNIPROTKB|P25888 [details] [associations]
            symbol:rhlE "ATP-dependent RNA helicase" species:83333
            "Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IGI]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=IDA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
            GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
            GO:GO:0005840 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0042255 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 EMBL:L02123 HOGENOM:HOG000268807 EMBL:X56307
            PIR:E64816 RefSeq:NP_415318.1 RefSeq:YP_489070.1
            ProteinModelPortal:P25888 SMR:P25888 DIP:DIP-10697N IntAct:P25888
            MINT:MINT-1313387 PRIDE:P25888 EnsemblBacteria:EBESCT00000003075
            EnsemblBacteria:EBESCT00000017437 GeneID:12930968 GeneID:945425
            KEGG:ecj:Y75_p0770 KEGG:eco:b0797 PATRIC:32116795 EchoBASE:EB1217
            EcoGene:EG11235 KO:K11927 OMA:HLIKQHN ProtClustDB:PRK10590
            BioCyc:EcoCyc:EG11235-MONOMER BioCyc:ECOL316407:JW0781-MONOMER
            Genevestigator:P25888 Uniprot:P25888
        Length = 454

 Score = 186 (70.5 bits), Expect = 8.7e-14, P = 8.7e-14
 Identities = 50/159 (31%), Positives = 83/159 (52%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
             D+L++TP               +VE LVLDEAD++ ++G  +  I  V+     P+  ++
Sbjct:   127 DVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMG-FIHDIRRVLTKL--PAKRQN 183

Query:    77 L-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 135
             L FSAT  D ++ LA  ++H+ + + V R+NTAS+ + Q + F   +  + L L     +
Sbjct:   184 LLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKREL-LSHMIGK 242

Query:   136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
                  VL+F ++K  A  L  +L  D IR+  IH + SQ
Sbjct:   243 GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQ 281


>UNIPROTKB|F1P0H1 [details] [associations]
            symbol:DDX42 "ATP-dependent RNA helicase DDX42"
            species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00610000086076 EMBL:AADN02056764
            IPI:IPI00819332 Ensembl:ENSGALT00000040437 ArrayExpress:F1P0H1
            Uniprot:F1P0H1
        Length = 703

 Score = 185 (70.2 bits), Expect = 2.5e-13, P = 2.5e-13
 Identities = 50/161 (31%), Positives = 80/161 (49%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
             +I++ TP               RV YLV DEAD++F++G   ++    + +   P     
Sbjct:   373 EIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 430

Query:    77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
             LFSAT    +E+LAR I+ D +RV+ G    A+E + Q +    S   K   L +   E 
Sbjct:   431 LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEIFPSGPSKWNWLTRRLVEF 490

Query:   136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             + +  VL+FV  K  A+EL   L  +D   G++H D+ Q++
Sbjct:   491 TSSGSVLLFVTKKANAEELANNLKQEDHNLGLLHGDMDQSE 531


>UNIPROTKB|Q5F485 [details] [associations]
            symbol:DDX42 "ATP-dependent RNA helicase DDX42"
            species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008104 "protein
            localization" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0005737 "cytoplasm" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
            EMBL:AJ851415 IPI:IPI00576529 RefSeq:NP_001026097.1
            UniGene:Gga.5156 ProteinModelPortal:Q5F485 STRING:Q5F485
            GeneID:419959 KEGG:gga:419959 CTD:11325 HOGENOM:HOG000268793
            HOVERGEN:HBG081425 InParanoid:Q5F485 KO:K12835 OrthoDB:EOG47WNN9
            NextBio:20822943 Uniprot:Q5F485
        Length = 944

 Score = 185 (70.2 bits), Expect = 3.8e-13, P = 3.8e-13
 Identities = 50/161 (31%), Positives = 80/161 (49%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
             +I++ TP               RV YLV DEAD++F++G   ++    + +   P     
Sbjct:   378 EIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 435

Query:    77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
             LFSAT    +E+LAR I+ D +RV+ G    A+E + Q +    S   K   L +   E 
Sbjct:   436 LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEIFPSGPSKWNWLTRRLVEF 495

Query:   136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             + +  VL+FV  K  A+EL   L  +D   G++H D+ Q++
Sbjct:   496 TSSGSVLLFVTKKANAEELANNLKQEDHNLGLLHGDMDQSE 536


>UNIPROTKB|F1NJ40 [details] [associations]
            symbol:DDX42 "ATP-dependent RNA helicase DDX42"
            species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0008104 "protein localization" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00576529 OMA:QGVNNTA
            GeneTree:ENSGT00610000086076 EMBL:AADN02056764
            Ensembl:ENSGALT00000000811 ArrayExpress:F1NJ40 Uniprot:F1NJ40
        Length = 946

 Score = 185 (70.2 bits), Expect = 3.8e-13, P = 3.8e-13
 Identities = 50/161 (31%), Positives = 80/161 (49%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
             +I++ TP               RV YLV DEAD++F++G   ++    + +   P     
Sbjct:   380 EIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 437

Query:    77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
             LFSAT    +E+LAR I+ D +RV+ G    A+E + Q +    S   K   L +   E 
Sbjct:   438 LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEIFPSGPSKWNWLTRRLVEF 497

Query:   136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             + +  VL+FV  K  A+EL   L  +D   G++H D+ Q++
Sbjct:   498 TSSGSVLLFVTKKANAEELANNLKQEDHNLGLLHGDMDQSE 538


>DICTYBASE|DDB_G0288501 [details] [associations]
            symbol:ddx42 "DEAD/DEAH box helicase" species:44689
            "Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            dictyBase:DDB_G0288501 GO:GO:0005524 GO:GO:0005634
            GenomeReviews:CM000154_GR GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 EMBL:AAFI02000112 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
            KO:K12835 RefSeq:XP_636700.1 ProteinModelPortal:Q54IV3
            STRING:Q54IV3 EnsemblProtists:DDB0233432 GeneID:8626657
            KEGG:ddi:DDB_G0288501 OMA:DRDKRGG Uniprot:Q54IV3
        Length = 986

 Score = 185 (70.2 bits), Expect = 4.0e-13, P = 4.0e-13
 Identities = 54/168 (32%), Positives = 80/168 (47%)

Query:    13 KFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-- 70
             K  C+I+++TP              +RV YLVLDEADK+F+ G       P V +  N  
Sbjct:   426 KAGCEIIVATPGRLIDMIKLKATKLNRVSYLVLDEADKMFDFG-----FGPQVLSIVNHV 480

Query:    71 -PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 129
              P     LFSAT    VEE AR+I+ D +++ +G   +A+  I Q +    S+  K   L
Sbjct:   481 RPDRQTLLFSATFKPNVEEFARTILSDPIKISIGMIGSANSDITQIVQVLKSDSDKWNWL 540

Query:   130 RQSFAESLNP-PVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
                 A  L+   VLIFV +K   ++L   L     +   +H D +Q +
Sbjct:   541 TNQLALLLSQGSVLIFVSTKVAVEQLSSNLTKFGFQTCTLHGDKNQIE 588


>UNIPROTKB|I3LHW0 [details] [associations]
            symbol:I3LHW0 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
            Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
            GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 Ensembl:ENSSSCT00000032137 OMA:FESQIMK
            Uniprot:I3LHW0
        Length = 621

 Score = 181 (68.8 bits), Expect = 5.5e-13, P = 5.5e-13
 Identities = 52/169 (30%), Positives = 84/169 (49%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             D+ K   DI+I+TP                + YLVLDEADK+ ++G   +H    +    
Sbjct:   334 DIMK-GVDIIIATPGRLNDLQMNNFVNLRSITYLVLDEADKMLDLG--FEHQIMKILLDV 390

Query:    70 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQKLVFAGSEEGKLLA 128
              P     + SAT PD + +LA S + + + V VG  +  A +++KQ ++    EE +  +
Sbjct:   391 RPDRQTIMTSATWPDTIRQLAHSYLKEPMLVYVGTLDLVAVDTVKQNIIITTEEEKR--S 448

Query:   129 LRQSFAESLNPP--VLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
             L Q F +SL+P   V++FV  K  A +L  +L+   I    +H D  Q+
Sbjct:   449 LFQEFLQSLSPKDKVIVFVSRKLIADDLSSDLSIQGIPVQSLHGDREQS 497


>UNIPROTKB|F1SQ03 [details] [associations]
            symbol:LOC100524536 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
            Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
            GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            OMA:GLKSICI EMBL:CU927956 RefSeq:XP_003135023.1
            ProteinModelPortal:F1SQ03 Ensembl:ENSSSCT00000013311
            GeneID:100524536 Uniprot:F1SQ03
        Length = 630

 Score = 181 (68.8 bits), Expect = 5.6e-13, P = 5.6e-13
 Identities = 52/169 (30%), Positives = 84/169 (49%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             D+ K   DI+I+TP                + YLVLDEADK+ ++G   +H    +    
Sbjct:   343 DIMK-GVDIIIATPGRLNDLQMNNFVNLRSITYLVLDEADKMLDLG--FEHQIMKILLDV 399

Query:    70 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQKLVFAGSEEGKLLA 128
              P     + SAT PD + +LA S + + + V VG  +  A +++KQ ++    EE +  +
Sbjct:   400 RPDRQTIMTSATWPDTIRQLAHSYLKEPMLVYVGTLDLVAVDTVKQNIIITTEEEKR--S 457

Query:   129 LRQSFAESLNPP--VLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
             L Q F +SL+P   V++FV  K  A +L  +L+   I    +H D  Q+
Sbjct:   458 LFQEFLQSLSPKDKVIVFVSRKLIADDLSSDLSIQGIPVQSLHGDREQS 506


>UNIPROTKB|E1BJD2 [details] [associations]
            symbol:DDX42 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0008104 "protein localization" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
            GeneTree:ENSGT00610000086076 EMBL:DAAA02049325 IPI:IPI00701280
            Ensembl:ENSBTAT00000028046 Uniprot:E1BJD2
        Length = 946

 Score = 183 (69.5 bits), Expect = 6.3e-13, P = 6.3e-13
 Identities = 50/162 (30%), Positives = 82/162 (50%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
             +I++ TP               RV YLV DEAD++F++G   ++    + +   P     
Sbjct:   378 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 435

Query:    77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQ--KLVFAGSEEGKLLALRQSFA 134
             LFSAT    +E+LAR I+ D +RV+ G    A+E + Q  +++ +GS+   L      F 
Sbjct:   436 LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGSKWNWLTRRLVEFT 495

Query:   135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
              S +  VL+FV  K  A+EL   L  +    G++H D+ Q++
Sbjct:   496 SSGS--VLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSE 535


>SGD|S000002651 [details] [associations]
            symbol:PRP28 "RNA helicase in the DEAD-box family"
            species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
            RNA helicase activity" evidence=TAS] [GO:0005681 "spliceosomal
            complex" evidence=TAS] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397
            "mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0000354 "cis
            assembly of pre-catalytic spliceosome" evidence=TAS] [GO:0005682
            "U5 snRNP" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 SGD:S000002651 GO:GO:0005524
            GO:GO:0005737 EMBL:BK006938 GO:GO:0005681 GO:GO:0005682
            GO:GO:0003676 EMBL:Z49701 GeneTree:ENSGT00690000102171
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000354
            RefSeq:NP_010529.3 GeneID:851830 KEGG:sce:YDR243C KO:K12858
            HOGENOM:HOG000268796 OrthoDB:EOG4KPXK0 EMBL:X56934 PIR:A39624
            RefSeq:NP_878065.3 ProteinModelPortal:P23394 SMR:P23394
            DIP:DIP-6324N IntAct:P23394 MINT:MINT-599541 STRING:P23394
            PaxDb:P23394 PeptideAtlas:P23394 EnsemblFungi:YDR243C
            GeneID:1466436 KEGG:sce:YDR246W-A CYGD:YDR243c OMA:HEMNERD
            NextBio:969715 Genevestigator:P23394 GermOnline:YDR243C
            Uniprot:P23394
        Length = 588

 Score = 180 (68.4 bits), Expect = 6.4e-13, P = 6.4e-13
 Identities = 54/177 (30%), Positives = 92/177 (51%)

Query:     8 STDLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVG------NLLKHI 61
             S  LS+  CDIL++TP               +VE LVLDEADK+ ++G      N+L  +
Sbjct:   304 SFSLSE-GCDILVATPGRLIDSLENHLLVMKQVETLVLDEADKMIDLGFEDQVTNILTKV 362

Query:    62 DPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLV-FAG 120
             D  + A S  +    +F+AT+   +E++A   M   V   +G + T SE + Q++V +A 
Sbjct:   363 D--INADSAVNRQTLMFTATMTPVIEKIAAGYMQKPVYATIGVE-TGSEPLIQQVVEYAD 419

Query:   121 SEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFD-DIRAGVIHSDLSQTQ 176
             ++E K   L+   A+  +PP++IF+  K  A  L  +   + +++  ++H   SQ Q
Sbjct:   420 NDEDKFKKLKPIVAK-YDPPIIIFINYKQTADWLAEKFQKETNMKVTILHGSKSQEQ 475


>SGD|S000003046 [details] [associations]
            symbol:DBP3 "RNA-Dependent ATPase, member of DExD/H-box
            family" species:4932 "Saccharomyces cerevisiae" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=IDA] [GO:0005730
            "nucleolus" evidence=IEA;IDA] [GO:0030687 "preribosome, large
            subunit precursor" evidence=IDA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
            processing" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000464
            "endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from
            tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
            evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 SGD:S000003046 GO:GO:0005524
            GO:GO:0005730 EMBL:BK006941 GO:GO:0003723 GO:GO:0030687
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S EMBL:M80437
            EMBL:Z72600 PIR:S30805 RefSeq:NP_011437.3 RefSeq:NP_011442.3
            ProteinModelPortal:P20447 SMR:P20447 DIP:DIP-2668N IntAct:P20447
            MINT:MINT-1164200 STRING:P20447 PaxDb:P20447 PeptideAtlas:P20447
            EnsemblFungi:YGL078C GeneID:852802 GeneID:852806 KEGG:sce:YGL073W
            KEGG:sce:YGL078C CYGD:YGL078c GeneTree:ENSGT00680000100003
            KO:K09419 OMA:EEEWPEK NextBio:972321 Genevestigator:P20447
            GermOnline:YGL078C GO:GO:0000464 Uniprot:P20447
        Length = 523

 Score = 177 (67.4 bits), Expect = 1.1e-12, P = 1.1e-12
 Identities = 51/165 (30%), Positives = 81/165 (49%)

Query:    18 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 77
             ++++TP              S+V YLVLDEAD++ E G   + I  +++          +
Sbjct:   234 VVVATPGRLLDLLQEGSVDLSQVNYLVLDEADRMLEKG-FEEDIKNIIRETDASKRQTLM 292

Query:    78 FSATLPDFVEELARSIMHDAVRVIVGRKN--TASESIKQ--KLVFAGSEEGKLLALRQSF 133
             F+AT P  V ELA + M++ ++V +G  +  TA++ I Q  ++V    +E KLL L + +
Sbjct:   293 FTATWPKEVRELASTFMNNPIKVSIGNTDQLTANKRITQIVEVVDPRGKERKLLELLKKY 352

Query:   134 --AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
                   N  VLIF   K  A  +   L ++      IH DLSQ Q
Sbjct:   353 HSGPKKNEKVLIFALYKKEAARVERNLKYNGYNVAAIHGDLSQQQ 397


>UNIPROTKB|Q48AV0 [details] [associations]
            symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
            GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
            BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
        Length = 420

 Score = 175 (66.7 bits), Expect = 1.1e-12, P = 1.1e-12
 Identities = 50/164 (30%), Positives = 85/164 (51%)

Query:    13 KFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
             K   DILI+TP              S +E LV DEAD++ ++G   + ID + +    P 
Sbjct:   124 KVGVDILIATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMG-FKEEIDQITQYL--PK 180

Query:    73 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
               ++L FSAT  D + +++++I+ +   V +  KN A++ ++Q LV+ G +  +   L  
Sbjct:   181 TKQTLLFSATFADDIYKMSKNILVEPKMVEIDEKNKAADDVEQ-LVY-GVDADRKRELTS 238

Query:   132 SFAESLN-PPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
                 S N   VL+F ++K  A +L  E+  D +++  IH D SQ
Sbjct:   239 FLIGSRNWKQVLVFTRTKQCADDLAKEMTKDGVKSLAIHGDKSQ 282


>TIGR_CMR|CPS_0042 [details] [associations]
            symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
            GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
            BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
        Length = 420

 Score = 175 (66.7 bits), Expect = 1.1e-12, P = 1.1e-12
 Identities = 50/164 (30%), Positives = 85/164 (51%)

Query:    13 KFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
             K   DILI+TP              S +E LV DEAD++ ++G   + ID + +    P 
Sbjct:   124 KVGVDILIATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMG-FKEEIDQITQYL--PK 180

Query:    73 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
               ++L FSAT  D + +++++I+ +   V +  KN A++ ++Q LV+ G +  +   L  
Sbjct:   181 TKQTLLFSATFADDIYKMSKNILVEPKMVEIDEKNKAADDVEQ-LVY-GVDADRKRELTS 238

Query:   132 SFAESLN-PPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
                 S N   VL+F ++K  A +L  E+  D +++  IH D SQ
Sbjct:   239 FLIGSRNWKQVLVFTRTKQCADDLAKEMTKDGVKSLAIHGDKSQ 282


>CGD|CAL0005460 [details] [associations]
            symbol:DBP3 species:5476 "Candida albicans" [GO:0005730
            "nucleolus" evidence=IEA] [GO:0030687 "preribosome, large subunit
            precursor" evidence=IEA] [GO:0000464 "endonucleolytic cleavage in
            ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript
            (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0008186
            "RNA-dependent ATPase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0005460
            GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 EMBL:AACQ01000001
            EMBL:AACQ01000002 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 RefSeq:XP_723365.1 RefSeq:XP_723554.1
            ProteinModelPortal:Q5APT8 STRING:Q5APT8 GeneID:3634868
            GeneID:3635070 KEGG:cal:CaO19.12334 KEGG:cal:CaO19.4870 KO:K14811
            Uniprot:Q5APT8
        Length = 564

 Score = 177 (67.4 bits), Expect = 1.3e-12, P = 1.3e-12
 Identities = 51/168 (30%), Positives = 84/168 (50%)

Query:    15 SCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
             + +++++TP               +V YLVLDEAD++ E G   + I  ++   SN    
Sbjct:   272 TANVVVATPGRLVDLINDGAINLGKVNYLVLDEADRMLEKG-FEEDIKTIISNTSNSERQ 330

Query:    75 RSLFSATLPDFVEELARSIMHDAVRVIVGRKN--TASESIKQ--KLVFAGSEEGKLLALR 130
               +F+AT P  V ELA + M+  V+V VG ++  +A++ I Q  +++    +E KL+ L 
Sbjct:   331 TLMFTATWPKEVRELANNFMNSPVKVTVGDRDELSANKRITQVVEVINKFDKEKKLIQLL 390

Query:   131 QSFA--ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             + +   ES +  +LIF   K  A  +   L  +      IH DLSQ Q
Sbjct:   391 RKYNANESSDNKILIFALYKKEASRIENFLKRNRFSVAAIHGDLSQQQ 438


>MGI|MGI:1919297 [details] [associations]
            symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
            evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008104 "protein localization" evidence=ISO]
            [GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1919297
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
            GO:GO:0016607 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 EMBL:AL604045 HSSP:P09052
            CTD:11325 HOGENOM:HOG000268793 HOVERGEN:HBG081425 KO:K12835
            OrthoDB:EOG47WNN9 OMA:QGVNNTA ChiTaRS:DDX42 EMBL:AK007805
            EMBL:AK049311 EMBL:AK169816 EMBL:AK171730 EMBL:BC043036
            IPI:IPI00329839 IPI:IPI00830514 RefSeq:NP_082350.3 UniGene:Mm.41367
            ProteinModelPortal:Q810A7 SMR:Q810A7 IntAct:Q810A7 STRING:Q810A7
            PhosphoSite:Q810A7 PaxDb:Q810A7 PRIDE:Q810A7
            Ensembl:ENSMUST00000021046 GeneID:72047 KEGG:mmu:72047
            UCSC:uc007lyk.2 UCSC:uc007lyl.2 GeneTree:ENSGT00610000086076
            InParanoid:Q810A7 NextBio:335308 Bgee:Q810A7 CleanEx:MM_DDX42
            Genevestigator:Q810A7 Uniprot:Q810A7
        Length = 929

 Score = 180 (68.4 bits), Expect = 1.3e-12, P = 1.3e-12
 Identities = 49/161 (30%), Positives = 79/161 (49%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
             +I++ TP               RV YLV DEAD++F++G   ++    + +   P     
Sbjct:   378 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 435

Query:    77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
             LFSAT    +E+LAR I+ D +RV+ G    A+E + Q +    S   K   L +   E 
Sbjct:   436 LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEF 495

Query:   136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             + +  VL+FV  K  A+EL   L  +    G++H D+ Q++
Sbjct:   496 TSSGSVLLFVTKKANAEELASNLKQEGHNLGLLHGDMDQSE 536


>RGD|1304909 [details] [associations]
            symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
            species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
            evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008104 "protein localization" evidence=IEA;ISO]
            [GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1304909
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
            GO:GO:0003676 EMBL:CH473948 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            CTD:11325 KO:K12835 OrthoDB:EOG47WNN9 GeneTree:ENSGT00610000086076
            IPI:IPI00361283 RefSeq:NP_001100529.1 UniGene:Rn.154550
            Ensembl:ENSRNOT00000013046 GeneID:303607 KEGG:rno:303607
            UCSC:RGD:1304909 NextBio:651732 Uniprot:D4A031
        Length = 929

 Score = 180 (68.4 bits), Expect = 1.3e-12, P = 1.3e-12
 Identities = 49/161 (30%), Positives = 79/161 (49%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
             +I++ TP               RV YLV DEAD++F++G   ++    + +   P     
Sbjct:   378 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 435

Query:    77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
             LFSAT    +E+LAR I+ D +RV+ G    A+E + Q +    S   K   L +   E 
Sbjct:   436 LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEF 495

Query:   136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             + +  VL+FV  K  A+EL   L  +    G++H D+ Q++
Sbjct:   496 TSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSE 536


>UNIPROTKB|E2RFF1 [details] [associations]
            symbol:DDX42 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0008104 "protein localization" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
            GeneTree:ENSGT00610000086076 EMBL:AAEX03006359
            Ensembl:ENSCAFT00000020366 Uniprot:E2RFF1
        Length = 933

 Score = 180 (68.4 bits), Expect = 1.3e-12, P = 1.3e-12
 Identities = 49/161 (30%), Positives = 79/161 (49%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
             +I++ TP               RV YLV DEAD++F++G   ++    + +   P     
Sbjct:   378 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 435

Query:    77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
             LFSAT    +E+LAR I+ D +RV+ G    A+E + Q +    S   K   L +   E 
Sbjct:   436 LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEF 495

Query:   136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             + +  VL+FV  K  A+EL   L  +    G++H D+ Q++
Sbjct:   496 TSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSE 536


>UNIPROTKB|Q86XP3 [details] [associations]
            symbol:DDX42 "ATP-dependent RNA helicase DDX42"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0015030 "Cajal body"
            evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0008104 "protein
            localization" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 EMBL:AF083255 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
            EMBL:CH471109 GO:GO:0015030 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HSSP:P09052 CTD:11325 HOVERGEN:HBG081425 KO:K12835
            OrthoDB:EOG47WNN9 EMBL:AB036090 EMBL:AK292908 EMBL:AC015651
            EMBL:BC008208 EMBL:BC015505 EMBL:BC078667 EMBL:BC093081
            EMBL:AL050096 EMBL:BK000566 IPI:IPI00409671 IPI:IPI00829889
            PIR:T08745 RefSeq:NP_031398.2 RefSeq:NP_987095.1 UniGene:Hs.702010
            ProteinModelPortal:Q86XP3 SMR:Q86XP3 IntAct:Q86XP3
            MINT:MINT-1427725 STRING:Q86XP3 PhosphoSite:Q86XP3 DMDM:74750541
            PaxDb:Q86XP3 PRIDE:Q86XP3 Ensembl:ENST00000359353
            Ensembl:ENST00000389924 Ensembl:ENST00000457800
            Ensembl:ENST00000578681 Ensembl:ENST00000583590 GeneID:11325
            KEGG:hsa:11325 UCSC:uc002jbu.3 GeneCards:GC17P061851
            HGNC:HGNC:18676 HPA:HPA023447 HPA:HPA023571 HPA:HPA025941
            MIM:613369 neXtProt:NX_Q86XP3 PharmGKB:PA134875761
            InParanoid:Q86XP3 OMA:QGVNNTA ChiTaRS:DDX42 GenomeRNAi:11325
            NextBio:43019 ArrayExpress:Q86XP3 Bgee:Q86XP3 CleanEx:HS_DDX42
            Genevestigator:Q86XP3 Uniprot:Q86XP3
        Length = 938

 Score = 180 (68.4 bits), Expect = 1.3e-12, P = 1.3e-12
 Identities = 49/161 (30%), Positives = 79/161 (49%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
             +I++ TP               RV YLV DEAD++F++G   ++    + +   P     
Sbjct:   378 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 435

Query:    77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
             LFSAT    +E+LAR I+ D +RV+ G    A+E + Q +    S   K   L +   E 
Sbjct:   436 LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEF 495

Query:   136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             + +  VL+FV  K  A+EL   L  +    G++H D+ Q++
Sbjct:   496 TSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSE 536


>UNIPROTKB|F1RSJ7 [details] [associations]
            symbol:DDX42 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0008104 "protein localization" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
            GeneTree:ENSGT00610000086076 EMBL:CU466402 EMBL:CU466386
            Ensembl:ENSSSCT00000018821 Uniprot:F1RSJ7
        Length = 941

 Score = 180 (68.4 bits), Expect = 1.3e-12, P = 1.3e-12
 Identities = 49/161 (30%), Positives = 79/161 (49%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
             +I++ TP               RV YLV DEAD++F++G   ++    + +   P     
Sbjct:   378 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 435

Query:    77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
             LFSAT    +E+LAR I+ D +RV+ G    A+E + Q +    S   K   L +   E 
Sbjct:   436 LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEF 495

Query:   136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             + +  VL+FV  K  A+EL   L  +    G++H D+ Q++
Sbjct:   496 TSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSE 536


>UNIPROTKB|Q5R7D1 [details] [associations]
            symbol:DDX42 "ATP-dependent RNA helicase DDX42"
            species:9601 "Pongo abelii" [GO:0005634 "nucleus" evidence=ISS]
            [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008104 "protein
            localization" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
            GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
            CTD:11325 HOVERGEN:HBG081425 KO:K12835 EMBL:CR860187
            RefSeq:NP_001126368.1 UniGene:Pab.3212 ProteinModelPortal:Q5R7D1
            GeneID:100173349 KEGG:pon:100173349 Uniprot:Q5R7D1
        Length = 942

 Score = 180 (68.4 bits), Expect = 1.3e-12, P = 1.3e-12
 Identities = 49/161 (30%), Positives = 79/161 (49%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
             +I++ TP               RV YLV DEAD++F++G   ++    + +   P     
Sbjct:   378 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 435

Query:    77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
             LFSAT    +E+LAR I+ D +RV+ G    A+E + Q +    S   K   L +   E 
Sbjct:   436 LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEF 495

Query:   136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             + +  VL+FV  K  A+EL   L  +    G++H D+ Q++
Sbjct:   496 TSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSE 536


>UNIPROTKB|Q8EGU0 [details] [associations]
            symbol:SO_1501 "ATP-dependent RNA helicase DEAD box family"
            species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
            OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
            GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
            ProtClustDB:CLSK906294 Uniprot:Q8EGU0
        Length = 456

 Score = 175 (66.7 bits), Expect = 1.4e-12, P = 1.4e-12
 Identities = 51/158 (32%), Positives = 81/158 (51%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
             DIL++TP              S V  LV+DEAD++ ++G  ++ I+ V +  + P     
Sbjct:   124 DILVATPGRLFDIIGQFNLDLSSVTTLVIDEADRMLDLG-FVRDIEKVKRLIA-PVHQTM 181

Query:    77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
             LFSAT  D V++L+  +++    V V    TAS +++Q LV+   +  K   L +    +
Sbjct:   182 LFSATYSDAVKQLSHKMLNQPQWVNVAENTTAS-TVEQ-LVYRVDKRRKAELLSELVGRN 239

Query:   137 LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
                 VL+F  +K+ A+ L  EL  D I AGV H D +Q
Sbjct:   240 NWRQVLVFASTKECAEHLLQELTLDGISAGVFHGDKTQ 277


>TIGR_CMR|SO_1501 [details] [associations]
            symbol:SO_1501 "ATP-dependent RNA helicase, DEAD box
            family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
            OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
            GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
            ProtClustDB:CLSK906294 Uniprot:Q8EGU0
        Length = 456

 Score = 175 (66.7 bits), Expect = 1.4e-12, P = 1.4e-12
 Identities = 51/158 (32%), Positives = 81/158 (51%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
             DIL++TP              S V  LV+DEAD++ ++G  ++ I+ V +  + P     
Sbjct:   124 DILVATPGRLFDIIGQFNLDLSSVTTLVIDEADRMLDLG-FVRDIEKVKRLIA-PVHQTM 181

Query:    77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
             LFSAT  D V++L+  +++    V V    TAS +++Q LV+   +  K   L +    +
Sbjct:   182 LFSATYSDAVKQLSHKMLNQPQWVNVAENTTAS-TVEQ-LVYRVDKRRKAELLSELVGRN 239

Query:   137 LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
                 VL+F  +K+ A+ L  EL  D I AGV H D +Q
Sbjct:   240 NWRQVLVFASTKECAEHLLQELTLDGISAGVFHGDKTQ 277


>DICTYBASE|DDB_G0287361 [details] [associations]
            symbol:ddx41 "DEAD box protein abstrakt"
            species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0006396 "RNA processing" evidence=ISS] [GO:0046872
            "metal ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
            PROSITE:PS51194 SMART:SM00343 SMART:SM00490 dictyBase:DDB_G0287361
            GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
            GenomeReviews:CM000154_GR GO:GO:0003723 GO:GO:0006396
            EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HSSP:P09052 RefSeq:XP_637262.1 ProteinModelPortal:Q54KG1 SMR:Q54KG1
            IntAct:Q54KG1 EnsemblProtists:DDB0233452 GeneID:8626092
            KEGG:ddi:DDB_G0287361 KO:K13116 OMA:DICRYLC Uniprot:Q54KG1
        Length = 671

 Score = 176 (67.0 bits), Expect = 2.1e-12, P = 2.1e-12
 Identities = 53/173 (30%), Positives = 84/173 (48%)

Query:     4 ELVRSTDLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDP 63
             +L     + K    ++I+TP                 +YL LDEAD+L ++G     I  
Sbjct:   344 DLREQEHIFKKGVHMIIATPGRLLDLLNKKKINFKLCKYLGLDEADRLIDLG-FEDDIRS 402

Query:    64 VVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEE 123
             V+   +N      LFSAT+P  ++E ARS +   V V VGR   A+ ++ Q++ F    E
Sbjct:   403 VLDNFTNQRQTL-LFSATMPKKIQEFARSALVLPVEVNVGRAGAANLNVTQEVEFV-KPE 460

Query:   124 GKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
              K++ L +   ++  PPVLIF ++K    ++Y  L    + A  IH D SQ +
Sbjct:   461 AKIVYLLECLQKT-PPPVLIFCENKKDVDDIYEYLLLKQVEAVSIHGDKSQDE 512


>UNIPROTKB|Q8EE19 [details] [associations]
            symbol:SO_2571 "ATP-dependent RNA helicase DEAD box family"
            species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
            HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
            GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
            ProtClustDB:CLSK906777 Uniprot:Q8EE19
        Length = 475

 Score = 173 (66.0 bits), Expect = 2.5e-12, P = 2.5e-12
 Identities = 50/158 (31%), Positives = 76/158 (48%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
             D+L++TP                V  LVLDEAD++ ++G  ++ I+ +++          
Sbjct:   125 DLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMG-FIEDINNIIEKLPEQR-QNL 182

Query:    77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
             LFSATL   V+ LA++ + DA+ + + RKN AS  I Q L     +    L L     E+
Sbjct:   183 LFSATLSKQVKALAKTAIPDAIEIEISRKNAASTQIDQWLTTVDKDRKSAL-LSHLIKEN 241

Query:   137 LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
                  LIF+Q+K  A +L  +L    I A   HS  SQ
Sbjct:   242 NWAQALIFIQTKHGAAKLVSQLEKRGIVAEAFHSGRSQ 279


>TIGR_CMR|SO_2571 [details] [associations]
            symbol:SO_2571 "ATP-dependent RNA helicase, DEAD box
            family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
            HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
            GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
            ProtClustDB:CLSK906777 Uniprot:Q8EE19
        Length = 475

 Score = 173 (66.0 bits), Expect = 2.5e-12, P = 2.5e-12
 Identities = 50/158 (31%), Positives = 76/158 (48%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
             D+L++TP                V  LVLDEAD++ ++G  ++ I+ +++          
Sbjct:   125 DLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMG-FIEDINNIIEKLPEQR-QNL 182

Query:    77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
             LFSATL   V+ LA++ + DA+ + + RKN AS  I Q L     +    L L     E+
Sbjct:   183 LFSATLSKQVKALAKTAIPDAIEIEISRKNAASTQIDQWLTTVDKDRKSAL-LSHLIKEN 241

Query:   137 LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
                  LIF+Q+K  A +L  +L    I A   HS  SQ
Sbjct:   242 NWAQALIFIQTKHGAAKLVSQLEKRGIVAEAFHSGRSQ 279


>POMBASE|SPCC1795.11 [details] [associations]
            symbol:sum3 "translation initiation RNA helicase Sum3"
            species:4896 "Schizosaccharomyces pombe" [GO:0002183 "cytoplasmic
            translational initiation" evidence=IMP] [GO:0003743 "translation
            initiation factor activity" evidence=IEA] [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=TAS] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007346
            "regulation of mitotic cell cycle" evidence=IMP] [GO:0010628
            "positive regulation of gene expression" evidence=IMP] [GO:0031047
            "gene silencing by RNA" evidence=IDA] [GO:0031137 "regulation of
            conjugation with cellular fusion" evidence=IGI] [GO:0071470
            "cellular response to osmotic stress" evidence=IMP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 PomBase:SPCC1795.11 GO:GO:0005829 GO:GO:0005524
            GO:GO:0007346 GO:GO:0051301 GO:GO:0007067 EMBL:CU329672
            GenomeReviews:CU329672_GR GO:GO:0071470 GO:GO:0010628 GO:GO:0031047
            GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 GO:GO:0031137 InterPro:IPR014014 PROSITE:PS51195
            GO:GO:0002183 HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4
            OMA:KYERGGN EMBL:AF025536 EMBL:AF084222 EMBL:AB012389 EMBL:AJ237697
            EMBL:AB027871 PIR:T43543 RefSeq:NP_588033.1
            ProteinModelPortal:O13370 SMR:O13370 IntAct:O13370
            MINT:MINT-4666622 STRING:O13370 PRIDE:O13370
            EnsemblFungi:SPCC1795.11.1 GeneID:2538689 KEGG:spo:SPCC1795.11
            NextBio:20799875 Uniprot:O13370
        Length = 636

 Score = 175 (66.7 bits), Expect = 2.5e-12, P = 2.5e-12
 Identities = 52/166 (31%), Positives = 80/166 (48%)

Query:    16 CDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
             CD+L +TP              + +++LVLDEAD++ ++G     I  +V+     S+  
Sbjct:   306 CDLLSATPGRLVDLIDRGRISLANIKFLVLDEADRMLDMG-FEPQIRHIVEGADMTSVEE 364

Query:    76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
                 +FSAT P  ++ LAR  + D V + VGR  + SE+I QK+V     E +   L   
Sbjct:   365 RQTLMFSATFPRDIQLLARDFLKDYVFLSVGRVGSTSENITQKVVHVEDSEKRSYLL--D 422

Query:   133 FAESLNPP--VLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
                +L P    LIFV++K  A  L   L   +  A  IH D +Q +
Sbjct:   423 ILHTLPPEGLTLIFVETKRMADTLTDYLLNSNFPATSIHGDRTQRE 468


>WB|WBGene00006888 [details] [associations]
            symbol:vbh-1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
            growth rate" evidence=IMP] [GO:0032502 "developmental process"
            evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
            evidence=IMP] [GO:0042006 "masculinization of hermaphroditic
            germ-line" evidence=IMP] [GO:0042127 "regulation of cell
            proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
            evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
            evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
            GO:GO:0040010 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
            GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0043186 GeneTree:ENSGT00620000087942
            HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN EMBL:FO081614
            GO:GO:0042006 RefSeq:NP_001021793.1 UniGene:Cel.16952
            ProteinModelPortal:Q65XX1 SMR:Q65XX1 IntAct:Q65XX1
            MINT:MINT-6669731 STRING:Q65XX1 PaxDb:Q65XX1 PRIDE:Q65XX1
            EnsemblMetazoa:Y54E10A.9c.1 EnsemblMetazoa:Y54E10A.9c.2
            GeneID:171888 KEGG:cel:CELE_Y54E10A.9 UCSC:Y54E10A.9a CTD:171888
            WormBase:Y54E10A.9c InParanoid:Q65XX1 NextBio:873115
            ArrayExpress:Q65XX1 Uniprot:Q65XX1
        Length = 660

 Score = 175 (66.7 bits), Expect = 2.7e-12, P = 2.7e-12
 Identities = 52/162 (32%), Positives = 80/162 (49%)

Query:    18 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS- 76
             ILI+TP              +   YLVLDEAD++ ++G     I  +V     P   R+ 
Sbjct:   276 ILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMG-FEPQIRKIVGQGMPPKTARTT 334

Query:    77 -LFSATLPDFVEELARSIMHDA-VRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
              +FSAT P  ++ LA+  + D  + + VGR  + SE+I+Q+L++    E +   +     
Sbjct:   335 AMFSATFPKEIQVLAKDFLKDNYIFLAVGRVGSTSENIEQRLLWVNEMEKRSNLMEILMN 394

Query:   135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             E     VL+FV++K  A EL   L    IR+  IH DL Q +
Sbjct:   395 EHSENLVLVFVETKRGANELAYFLNRQQIRSVSIHGDLKQIE 436


>UNIPROTKB|Q86TM3 [details] [associations]
            symbol:DDX53 "Probable ATP-dependent RNA helicase DDX53"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
            Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
            HOVERGEN:HBG015893 OrthoDB:EOG43BMNQ EMBL:AY039237 EMBL:BC051703
            EMBL:BC067878 IPI:IPI00328813 PIR:JC7831 RefSeq:NP_874358.2
            UniGene:Hs.434416 PDB:3IUY PDBsum:3IUY ProteinModelPortal:Q86TM3
            SMR:Q86TM3 STRING:Q86TM3 PhosphoSite:Q86TM3 DMDM:143811384
            PaxDb:Q86TM3 PRIDE:Q86TM3 Ensembl:ENST00000327968 GeneID:168400
            KEGG:hsa:168400 UCSC:uc004daj.3 CTD:168400 GeneCards:GC0XP023018
            HGNC:HGNC:20083 HPA:HPA003186 neXtProt:NX_Q86TM3
            PharmGKB:PA134863598 InParanoid:Q86TM3 OMA:GLKSICI
            EvolutionaryTrace:Q86TM3 GenomeRNAi:168400 NextBio:88718
            Bgee:Q86TM3 CleanEx:HS_DDX53 Genevestigator:Q86TM3
            GermOnline:ENSG00000184735 Uniprot:Q86TM3
        Length = 631

 Score = 174 (66.3 bits), Expect = 3.2e-12, P = 3.2e-12
 Identities = 52/172 (30%), Positives = 83/172 (48%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             D+SK   DI+I+TP                + YLV+DEADK+ ++       +P ++   
Sbjct:   341 DISK-GVDIIIATPGRLNDLQMNNSVNLRSITYLVIDEADKMLDM-----EFEPQIRKIL 394

Query:    70 ---NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQKLVFAGSEEGK 125
                 P     + SAT PD V +LA S + D + V VG  N  A  ++KQ ++    +E +
Sbjct:   395 LDVRPDRQTVMTSATWPDTVRQLALSYLKDPMIVYVGNLNLVAVNTVKQNIIVTTEKEKR 454

Query:   126 LLALRQSFAESLNP--PVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
               AL Q F E+++P   V++FV  K  A +L  +     I A  +H +  Q+
Sbjct:   455 --ALTQEFVENMSPNDKVIMFVSQKHIADDLSSDFNIQGISAESLHGNSEQS 504


>UNIPROTKB|Q9KV52 [details] [associations]
            symbol:rhlB "ATP-dependent RNA helicase RhlB"
            species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
            [GO:0006401 "RNA catabolic process" evidence=ISS] HAMAP:MF_00661
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR023554 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE003852
            GenomeReviews:AE003852_GR GO:GO:0003723 GO:GO:0006401
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:EEEWPEK
            KO:K03732 ProtClustDB:PRK04837 PIR:C82340 RefSeq:NP_229960.1
            ProteinModelPortal:Q9KV52 DNASU:2614975 GeneID:2614975
            KEGG:vch:VC0305 PATRIC:20079655 Uniprot:Q9KV52
        Length = 438

 Score = 171 (65.3 bits), Expect = 3.5e-12, P = 3.5e-12
 Identities = 48/159 (30%), Positives = 80/159 (50%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI-VR 75
             DILI T               + ++ +VLDEAD++F++G  +K I  + +    P   + 
Sbjct:   136 DILIGTTGRIIDFYKQRVFNLNHIQAVVLDEADRMFDLG-FIKDIRFLFRRMPEPKDRLN 194

Query:    76 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 135
              LFSATL   V+ELA   M++   V+V  +      I+++L F  S E K+  L+    E
Sbjct:   195 MLFSATLSYRVQELAFEHMNNPEHVVVEPEQKTGHRIQEEL-FYPSNEHKMALLQTLIEE 253

Query:   136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
                   +IF  +K R ++++  LA D+ R G++  D+ Q
Sbjct:   254 EWPDRAIIFANTKHRCEQIWAHLAADNHRVGLLTGDVPQ 292


>TIGR_CMR|VC_0305 [details] [associations]
            symbol:VC_0305 "ATP-dependent RNA helicase RhlB"
            species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006401
            "RNA catabolic process" evidence=ISS] HAMAP:MF_00661
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR023554 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE003852
            GenomeReviews:AE003852_GR GO:GO:0003723 GO:GO:0006401
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:EEEWPEK
            KO:K03732 ProtClustDB:PRK04837 PIR:C82340 RefSeq:NP_229960.1
            ProteinModelPortal:Q9KV52 DNASU:2614975 GeneID:2614975
            KEGG:vch:VC0305 PATRIC:20079655 Uniprot:Q9KV52
        Length = 438

 Score = 171 (65.3 bits), Expect = 3.5e-12, P = 3.5e-12
 Identities = 48/159 (30%), Positives = 80/159 (50%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI-VR 75
             DILI T               + ++ +VLDEAD++F++G  +K I  + +    P   + 
Sbjct:   136 DILIGTTGRIIDFYKQRVFNLNHIQAVVLDEADRMFDLG-FIKDIRFLFRRMPEPKDRLN 194

Query:    76 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 135
              LFSATL   V+ELA   M++   V+V  +      I+++L F  S E K+  L+    E
Sbjct:   195 MLFSATLSYRVQELAFEHMNNPEHVVVEPEQKTGHRIQEEL-FYPSNEHKMALLQTLIEE 253

Query:   136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
                   +IF  +K R ++++  LA D+ R G++  D+ Q
Sbjct:   254 EWPDRAIIFANTKHRCEQIWAHLAADNHRVGLLTGDVPQ 292


>ASPGD|ASPL0000077157 [details] [associations]
            symbol:AN10557 species:162425 "Emericella nidulans"
            [GO:0071470 "cellular response to osmotic stress" evidence=IEA]
            [GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
            [GO:0031137 "regulation of conjugation with cellular fusion"
            evidence=IEA] [GO:0002183 "cytoplasmic translational initiation"
            evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
            [GO:0010628 "positive regulation of gene expression" evidence=IEA]
            [GO:0097308 "cellular response to farnesol" evidence=IEP]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IEA] [GO:0033592 "RNA strand annealing activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003743 EMBL:BN001303 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            OMA:GNWANAN EMBL:AACD01000077 ProteinModelPortal:C8V8H4 SMR:C8V8H4
            PRIDE:C8V8H4 EnsemblFungi:CADANIAT00005985 Uniprot:C8V8H4
        Length = 668

 Score = 174 (66.3 bits), Expect = 3.5e-12, P = 3.5e-12
 Identities = 49/164 (29%), Positives = 79/164 (48%)

Query:    16 CDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV- 74
             CD+L++TP                ++YL+LDEAD++ ++G     I  +V+    P++  
Sbjct:   322 CDLLVATPGRLVDLIERGRISLVNIKYLILDEADRMLDMG-FEPQIRRIVEGEDMPNVND 380

Query:    75 RS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
             R   +FSAT P  ++ LAR  + D V + VGR  + SE+I QK+ +    + + + L   
Sbjct:   381 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVEDHDKRSVLLDIL 440

Query:   133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
                      LIFV++K  A  L   L      A  IH D +Q +
Sbjct:   441 HTHGTTGLTLIFVETKRMADALSEFLINQRFPATAIHGDRTQRE 484


>FB|FBgn0003261 [details] [associations]
            symbol:Rm62 "Rm62" species:7227 "Drosophila melanogaster"
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS;NAS]
            [GO:0003729 "mRNA binding" evidence=ISS] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0016246 "RNA interference" evidence=IMP]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
            splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
            evidence=IC;IDA] [GO:0019730 "antimicrobial humoral response"
            evidence=IMP] [GO:0005703 "polytene chromosome puff" evidence=IDA]
            [GO:0005875 "microtubule associated complex" evidence=IDA]
            [GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
            "catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
            splicing, via spliceosome" evidence=IC] [GO:0005700 "polytene
            chromosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 EMBL:AE014297 GO:GO:0005524 GO:GO:0005875
            GO:GO:0006417 GO:GO:0016246 GO:GO:0022008 GO:GO:0003729
            GO:GO:0019730 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GO:GO:0005703 GO:GO:0000381 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 KO:K12823 GeneTree:ENSGT00660000095174 EMBL:X52846
            EMBL:BT001716 EMBL:BT011476 EMBL:BT015209 PIR:S11485
            RefSeq:NP_001163528.1 RefSeq:NP_001189182.1 RefSeq:NP_524243.2
            RefSeq:NP_731031.1 RefSeq:NP_731032.1 RefSeq:NP_731033.1
            RefSeq:NP_731034.1 RefSeq:NP_731035.2 UniGene:Dm.1520
            ProteinModelPortal:P19109 SMR:P19109 DIP:DIP-17867N IntAct:P19109
            MINT:MINT-301207 STRING:P19109 PaxDb:P19109 PRIDE:P19109
            EnsemblMetazoa:FBtr0078652 GeneID:40739 KEGG:dme:Dmel_CG10279
            CTD:40739 FlyBase:FBgn0003261 InParanoid:P19109 OMA:HISNQPR
            OrthoDB:EOG4QBZMP PhylomeDB:P19109 GenomeRNAi:40739 NextBio:820339
            Bgee:P19109 GermOnline:CG10279 Uniprot:P19109
        Length = 719

 Score = 173 (66.0 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 50/172 (29%), Positives = 85/172 (49%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             DL +  C+I+I+TP               R  YLVLDEAD++ ++G     I  +V    
Sbjct:   400 DLQR-GCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMG-FEPQIRKIVSQI- 456

Query:    70 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQKLVFAG--SEEGKL 126
              P     ++SAT P  V++LA   + + +++ +G    +A+ +I+Q +      S+E KL
Sbjct:   457 RPDRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKL 516

Query:   127 LALRQSFAESLNPP--VLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
               L     ++   P  ++IFV++K R   L   +    +R G IH D SQ++
Sbjct:   517 KTLLSDIYDTSESPGKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSE 568


>UNIPROTKB|P0A8J8 [details] [associations]
            symbol:rhlB "RhlB" species:83333 "Escherichia coli K-12"
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006401 "RNA
            catabolic process" evidence=IDA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA;IDA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] HAMAP:MF_00661 InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR023554
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
            GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
            GO:GO:0006401 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            EMBL:M87049 GO:GO:0004004 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 EMBL:M83316 EMBL:X56310
            PIR:G65181 RefSeq:NP_418227.1 RefSeq:YP_491659.1
            ProteinModelPortal:P0A8J8 SMR:P0A8J8 DIP:DIP-35644N IntAct:P0A8J8
            PaxDb:P0A8J8 PRIDE:P0A8J8 EnsemblBacteria:EBESCT00000001927
            EnsemblBacteria:EBESCT00000015978 GeneID:12934326 GeneID:948290
            KEGG:ecj:Y75_p3395 KEGG:eco:b3780 PATRIC:32123051 EchoBASE:EB0837
            EcoGene:EG10844 HOGENOM:HOG000268807 KO:K03732 OMA:HIDGIKY
            ProtClustDB:PRK04837 BioCyc:EcoCyc:EG10844-MONOMER
            BioCyc:ECOL316407:JW3753-MONOMER Genevestigator:P0A8J8
            Uniprot:P0A8J8
        Length = 421

 Score = 169 (64.5 bits), Expect = 5.2e-12, P = 5.2e-12
 Identities = 50/160 (31%), Positives = 81/160 (50%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR- 75
             DILI T                 ++ +VLDEAD+++++G  +K I  + +    P+  R 
Sbjct:   136 DILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLG-FIKDIRWLFRRMP-PANQRL 193

Query:    76 -SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
               LFSATL   V ELA   M++A  + V  +      IK++L +  +EE K+  L+    
Sbjct:   194 NMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEE-KMRLLQTLIE 252

Query:   135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
             E      +IF  +K R +E++G LA D  R G++  D++Q
Sbjct:   253 EEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQ 292


>TIGR_CMR|SO_1383 [details] [associations]
            symbol:SO_1383 "ATP-dependent RNA helicase, DEAD box
            family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
            "nucleobase-containing compound metabolic process" evidence=ISS]
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
            GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_717003.1
            ProteinModelPortal:Q8EH47 GeneID:1169204 KEGG:son:SO_1383
            PATRIC:23522420 OMA:SEVVHGE ProtClustDB:CLSK906234 Uniprot:Q8EH47
        Length = 433

 Score = 169 (64.5 bits), Expect = 5.5e-12, P = 5.5e-12
 Identities = 46/162 (28%), Positives = 80/162 (49%)

Query:    13 KFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
             K   DI+++TP              S V++LVLDEAD++ ++G     I  +++A  N  
Sbjct:   122 KRGADIIVATPGRLLEHLTACNLSLSSVDFLVLDEADRMLDMG-FSADIQKILQAV-NKK 179

Query:    73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
                 LFSAT    V++LA  +M     +   ++NT ++++ Q +V+   +  K   L + 
Sbjct:   180 RQNLLFSATFSSAVKKLANEMMIKPQVISADKQNTTADTVSQ-VVYPVEQRRKRELLSEL 238

Query:   133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
               +     VL+F  ++D A  L  EL  D I + V+H + +Q
Sbjct:   239 IGKKNWQQVLVFTATRDAADTLVKELNLDGIPSEVVHGEKAQ 280


>ZFIN|ZDB-GENE-050706-53 [details] [associations]
            symbol:ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
            42" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            ZFIN:ZDB-GENE-050706-53 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
            EMBL:BX324157 IPI:IPI00774497 Ensembl:ENSDART00000076209
            Uniprot:E7F401
        Length = 910

 Score = 172 (65.6 bits), Expect = 8.9e-12, P = 8.9e-12
 Identities = 48/161 (29%), Positives = 78/161 (48%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
             +I++ TP               RV +LV DEAD++F++G   ++    + +   P     
Sbjct:   382 EIVVCTPGRLIDHVKKKATSLQRVTFLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 439

Query:    77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
             LFSAT    +E+LAR I+ D +RV+ G    A+E I Q +    S + K   L +   E 
Sbjct:   440 LFSATFRKKIEKLARDILVDPIRVVQGDIGEANEDITQIVEVLQSGQDKWGWLTRRLVEF 499

Query:   137 LNP-PVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
              +   VL+FV  K   +EL   L  +    G++H D+ Q++
Sbjct:   500 TSAGSVLVFVTKKANCEELATNLIQEGYSLGLLHGDMDQSE 540


>RGD|1309586 [details] [associations]
            symbol:RGD1309586 "similar to probable ATP-dependent RNA
            helicase - mouse" species:10116 "Rattus norvegicus" [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 RGD:1309586 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 KO:K11594 OMA:HIVQECD
            OrthoDB:EOG4S7JPR EMBL:CH473985 IPI:IPI00954695
            RefSeq:NP_001102328.1 UniGene:Rn.218622 Ensembl:ENSRNOT00000003378
            GeneID:364073 KEGG:rno:364073 UCSC:RGD:1309586 CTD:364073
            NextBio:684798 Uniprot:D3ZN21
        Length = 659

 Score = 170 (64.9 bits), Expect = 9.2e-12, P = 9.2e-12
 Identities = 51/168 (30%), Positives = 82/168 (48%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             DL +  C +L++TP                 +YLVLDEAD++ ++G     I  +V+  +
Sbjct:   310 DLER-GCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMG-FEPQIRRIVEQDT 367

Query:    70 NPSI-VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 126
              P   VR   +FSAT P  ++ LAR  + + + + VGR  + SE+I QK+V+    + + 
Sbjct:   368 MPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRS 427

Query:   127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
               L    A   +  +L+FV++K  A  L   L  +      IH D SQ
Sbjct:   428 FLLDLLNATGKDSLILVFVETKKGADSLEDFLYHEGYACTSIHGDRSQ 475


>MGI|MGI:91842 [details] [associations]
            symbol:D1Pas1 "DNA segment, Chr 1, Pasteur Institute 1"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275 "multicellular
            organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0030154 "cell differentiation" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:91842
            GO:GO:0007275 GO:GO:0005524 GO:GO:0030154 GO:GO:0003677
            GO:GO:0007283 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
            KO:K11594 HOVERGEN:HBG015893 EMBL:J04847 EMBL:AK029542
            IPI:IPI00133708 PIR:A32378 RefSeq:NP_149068.1 UniGene:Mm.108054
            ProteinModelPortal:P16381 SMR:P16381 IntAct:P16381 STRING:P16381
            PhosphoSite:P16381 PaxDb:P16381 PRIDE:P16381
            Ensembl:ENSMUST00000045108 GeneID:110957 KEGG:mmu:110957 CTD:110957
            InParanoid:P16381 OMA:HIVQECD OrthoDB:EOG4S7JPR NextBio:365019
            Bgee:P16381 CleanEx:MM_D1PAS1 Genevestigator:P16381
            GermOnline:ENSMUSG00000039224 Uniprot:P16381
        Length = 660

 Score = 170 (64.9 bits), Expect = 9.2e-12, P = 9.2e-12
 Identities = 51/168 (30%), Positives = 82/168 (48%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             DL +  C +L++TP                 +YLVLDEAD++ ++G     I  +V+  +
Sbjct:   311 DLER-GCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMG-FEPQIRRIVEQDT 368

Query:    70 NPSI-VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 126
              P   VR   +FSAT P  ++ LAR  + + + + VGR  + SE+I QK+V+    + + 
Sbjct:   369 MPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRS 428

Query:   127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
               L    A   +  +L+FV++K  A  L   L  +      IH D SQ
Sbjct:   429 FLLDLLNATGKDSLILVFVETKKGADSLEDFLYHEGYACTSIHGDRSQ 476


>UNIPROTKB|E2R4Z9 [details] [associations]
            symbol:DDX59 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00610000086076 EMBL:AAEX03005031
            Ensembl:ENSCAFT00000017691 Uniprot:E2R4Z9
        Length = 569

 Score = 169 (64.5 bits), Expect = 9.3e-12, P = 9.3e-12
 Identities = 47/163 (28%), Positives = 86/163 (52%)

Query:    18 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 77
             ++I+TP                ++ +V+DEAD + ++G   + +D +++   N S    L
Sbjct:   326 VIIATPGRLLDIIKQSSVELCGIKIVVVDEADTMLKMGFQQQVLD-ILEHVPNDSQT-IL 383

Query:    78 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAG--SEEGKLLALRQSFAE 135
              SAT+P  +E+LA  ++H+ VR+I G KN    S++Q +++    +++ KL  +     +
Sbjct:   384 VSATIPTSIEQLASQLLHNPVRIITGEKNLPCSSVRQIILWVEEPAKKKKLFEILND-KK 442

Query:   136 SLNPPVLIFVQSKDRAKELYGELA--FDDIRAGVIHSDLSQTQ 176
                PPVL+FV  K  A +L  E       +++  IHS+ SQT+
Sbjct:   443 LFKPPVLVFVDCKLGA-DLLSEAVQKITGLKSVSIHSEKSQTE 484


>UNIPROTKB|Q8EJQ5 [details] [associations]
            symbol:rhlB "ATP-dependent RNA helicase RhlB"
            species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] HAMAP:MF_00661 InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR023554
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003723 EMBL:AE014299
            GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732 ProtClustDB:PRK04837
            RefSeq:NP_716045.1 ProteinModelPortal:Q8EJQ5 GeneID:1168284
            KEGG:son:SO_0407 PATRIC:23520517 OMA:PANAERQ Uniprot:Q8EJQ5
        Length = 439

 Score = 167 (63.8 bits), Expect = 9.4e-12, P = 9.4e-12
 Identities = 48/159 (30%), Positives = 80/159 (50%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI-VR 75
             DILI T               + ++ +VLDEAD++F++G  +K I  + +   N    + 
Sbjct:   136 DILIGTTGRIIDYVRQGIINLNAIQAVVLDEADRMFDLG-FIKDIRFLFRRMPNADQRLN 194

Query:    76 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 135
              LFSATL   V+ELA   M+D V+V +  +   S++IK++ +F  S+E K+  L     E
Sbjct:   195 MLFSATLSMKVQELAYDHMNDPVKVEIAPEEKTSKNIKEE-IFYPSQEDKMRLLLTLIEE 253

Query:   136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
                   ++F  +K   + L+  L  D  R G++  D+ Q
Sbjct:   254 DWPEKAIVFSNTKHSCENLWSWLEGDGHRVGLLTGDVPQ 292


>TIGR_CMR|SO_0407 [details] [associations]
            symbol:SO_0407 "ATP-dependent RNA helicase, DEAD box
            family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] HAMAP:MF_00661 InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR023554
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003723 EMBL:AE014299
            GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732 ProtClustDB:PRK04837
            RefSeq:NP_716045.1 ProteinModelPortal:Q8EJQ5 GeneID:1168284
            KEGG:son:SO_0407 PATRIC:23520517 OMA:PANAERQ Uniprot:Q8EJQ5
        Length = 439

 Score = 167 (63.8 bits), Expect = 9.4e-12, P = 9.4e-12
 Identities = 48/159 (30%), Positives = 80/159 (50%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI-VR 75
             DILI T               + ++ +VLDEAD++F++G  +K I  + +   N    + 
Sbjct:   136 DILIGTTGRIIDYVRQGIINLNAIQAVVLDEADRMFDLG-FIKDIRFLFRRMPNADQRLN 194

Query:    76 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 135
              LFSATL   V+ELA   M+D V+V +  +   S++IK++ +F  S+E K+  L     E
Sbjct:   195 MLFSATLSMKVQELAYDHMNDPVKVEIAPEEKTSKNIKEE-IFYPSQEDKMRLLLTLIEE 253

Query:   136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
                   ++F  +K   + L+  L  D  R G++  D+ Q
Sbjct:   254 DWPEKAIVFSNTKHSCENLWSWLEGDGHRVGLLTGDVPQ 292


>DICTYBASE|DDB_G0277857 [details] [associations]
            symbol:helB2 "putative U5 small nuclear
            ribonucleoprotein" species:44689 "Dictyostelium discoideum"
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=ISS]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
            [GO:0000375 "RNA splicing, via transesterification reactions"
            evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397 "mRNA
            processing" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            dictyBase:DDB_G0277857 GO:GO:0005524 GO:GO:0005737
            GenomeReviews:CM000152_GR EMBL:AAFI02000023 GO:GO:0006397
            GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 KO:K12858 GO:GO:0000375 HSSP:P09052 EMBL:X81824
            RefSeq:XP_642321.1 ProteinModelPortal:Q54Y81 STRING:Q54Y81
            EnsemblProtists:DDB0219950 GeneID:8621527 KEGG:ddi:DDB_G0277857
            OMA:DRYRDND Uniprot:Q54Y81
        Length = 834

 Score = 127 (49.8 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
 Identities = 30/100 (30%), Positives = 48/100 (48%)

Query:    77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
             LFSAT+P  VE+L++  +     + +G      + I+Q ++F  SE  K   L Q   + 
Sbjct:   620 LFSATMPPLVEKLSKKYLRRPCTITIGEAGKVVDRIRQTVIFVKSENDKKEHLTQLIKDG 679

Query:   137 LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
               PP++IFV  K     +   L    +   ++HS  SQ Q
Sbjct:   680 PPPPIIIFVNKKKHCDIIAPVLEECRVSYTILHSGRSQEQ 719

 Score = 69 (29.3 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
 Identities = 15/45 (33%), Positives = 25/45 (55%)

Query:    11 LSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVG 55
             +SK  C+I+I+TP              ++  Y+VLDEAD + ++G
Sbjct:   536 VSK-GCEIIIATPGRLNDCLEKRYLVLNQCNYIVLDEADMMIDLG 579


>UNIPROTKB|E2R4Y9 [details] [associations]
            symbol:DDX59 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00610000086076 OMA:VTRPIID EMBL:AAEX03005031
            Ensembl:ENSCAFT00000017696 Uniprot:E2R4Y9
        Length = 623

 Score = 169 (64.5 bits), Expect = 1.1e-11, P = 1.1e-11
 Identities = 47/163 (28%), Positives = 86/163 (52%)

Query:    18 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 77
             ++I+TP                ++ +V+DEAD + ++G   + +D +++   N S    L
Sbjct:   326 VIIATPGRLLDIIKQSSVELCGIKIVVVDEADTMLKMGFQQQVLD-ILEHVPNDSQT-IL 383

Query:    78 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAG--SEEGKLLALRQSFAE 135
              SAT+P  +E+LA  ++H+ VR+I G KN    S++Q +++    +++ KL  +     +
Sbjct:   384 VSATIPTSIEQLASQLLHNPVRIITGEKNLPCSSVRQIILWVEEPAKKKKLFEILND-KK 442

Query:   136 SLNPPVLIFVQSKDRAKELYGELA--FDDIRAGVIHSDLSQTQ 176
                PPVL+FV  K  A +L  E       +++  IHS+ SQT+
Sbjct:   443 LFKPPVLVFVDCKLGA-DLLSEAVQKITGLKSVSIHSEKSQTE 484


>UNIPROTKB|Q83DM8 [details] [associations]
            symbol:rhlE "ATP-dependent RNA helicase" species:227377
            "Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
            RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8 GeneID:1208557
            KEGG:cbu:CBU_0670 PATRIC:17930019 ProtClustDB:CLSK914228
            BioCyc:CBUR227377:GJ7S-666-MONOMER Uniprot:Q83DM8
        Length = 420

 Score = 166 (63.5 bits), Expect = 1.1e-11, P = 1.1e-11
 Identities = 49/158 (31%), Positives = 74/158 (46%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
             DIL++TP              SRVE+ VLDEAD++ ++G  L  I  ++K     S    
Sbjct:   138 DILVATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMG-FLPDIRRILKLLPE-SRQNL 195

Query:    77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
             LFSAT    ++EL   ++H    + V R+NTA+  I   +V     + K   L       
Sbjct:   196 LFSATFSKEIKELTDKLLHSPALIEVARRNTAAARITH-VVHPVDRQRKRELLSFMIGSK 254

Query:   137 LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
                 VL+F ++K  A  L  +L  D + +  IH + SQ
Sbjct:   255 NWRQVLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQ 292


>TIGR_CMR|CBU_0670 [details] [associations]
            symbol:CBU_0670 "ATP-dependent RNA helicase RhlE,
            putative" species:227377 "Coxiella burnetii RSA 493" [GO:0008150
            "biological_process" evidence=ND] [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
            OMA:HLIKQHN RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8
            GeneID:1208557 KEGG:cbu:CBU_0670 PATRIC:17930019
            ProtClustDB:CLSK914228 BioCyc:CBUR227377:GJ7S-666-MONOMER
            Uniprot:Q83DM8
        Length = 420

 Score = 166 (63.5 bits), Expect = 1.1e-11, P = 1.1e-11
 Identities = 49/158 (31%), Positives = 74/158 (46%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
             DIL++TP              SRVE+ VLDEAD++ ++G  L  I  ++K     S    
Sbjct:   138 DILVATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMG-FLPDIRRILKLLPE-SRQNL 195

Query:    77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
             LFSAT    ++EL   ++H    + V R+NTA+  I   +V     + K   L       
Sbjct:   196 LFSATFSKEIKELTDKLLHSPALIEVARRNTAAARITH-VVHPVDRQRKRELLSFMIGSK 254

Query:   137 LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
                 VL+F ++K  A  L  +L  D + +  IH + SQ
Sbjct:   255 NWRQVLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQ 292


>TAIR|locus:2162022 [details] [associations]
            symbol:AT5G63120 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0000184 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            EMBL:AB008265 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 EMBL:AY060589
            EMBL:BT000610 EMBL:AK226611 EMBL:AJ010476 IPI:IPI00532778
            IPI:IPI00537266 PIR:T51349 RefSeq:NP_568964.1 RefSeq:NP_974985.1
            UniGene:At.27361 ProteinModelPortal:Q8W4R3 SMR:Q8W4R3 PaxDb:Q8W4R3
            PRIDE:Q8W4R3 EnsemblPlants:AT5G63120.2 GeneID:836432
            KEGG:ath:AT5G63120 GeneFarm:979 TAIR:At5g63120 InParanoid:Q8W4R3
            OMA:FTHANAK PhylomeDB:Q8W4R3 ProtClustDB:CLSN2690069
            Genevestigator:Q8W4R3 GermOnline:AT5G63120 Uniprot:Q8W4R3
        Length = 591

 Score = 168 (64.2 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 53/170 (31%), Positives = 83/170 (48%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             DL +   +I+I+TP               RV YLVLDEAD++ ++G     I  +V    
Sbjct:   284 DLRR-GVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDMG-FEPQIRKIVSQI- 340

Query:    70 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNT-ASESIKQKLVFAGSEE--GKL 126
              P     L+SAT P  VE LAR  + D  + I+G  +  A++SI Q +    + E   +L
Sbjct:   341 RPDRQTLLWSATWPREVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRL 400

Query:   127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             L L +   +     +LIFV++K    ++  +L  D   A  IH D +Q++
Sbjct:   401 LTLLKQLMDGSK--ILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSE 448


>UNIPROTKB|Q3MSQ8 [details] [associations]
            symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
            species:45623 "Pelophylax lessonae" [GO:0071546 "pi-body"
            evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
            GO:GO:0030154 GO:GO:0048477 GO:GO:0007283 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071546
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
            HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AJ841700
            ProteinModelPortal:Q3MSQ8 SMR:Q3MSQ8 Uniprot:Q3MSQ8
        Length = 724

 Score = 169 (64.5 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 48/165 (29%), Positives = 84/165 (50%)

Query:    16 CDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
             C+IL +TP              +++ YLVLDEAD++ ++G   + I+ ++K+   PS   
Sbjct:   414 CNILCATPGRLLDVIRKEKIGLTKLRYLVLDEADRMLDMG-FREDIENLLKSSGMPSKEE 472

Query:    76 S---LFSATLPDFVEELARSIMH-DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
                 +FSAT P  ++ LAR I+  D + V+VG+   A   ++Q +V    E GK   L +
Sbjct:   473 RQTLMFSATFPSSIQSLAREILKPDYLFVVVGQVGGACSDVEQ-MVIEVDEFGKKDKLME 531

Query:   132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
                E  +   ++FV++K +A  +   L  + + +  IH D  Q +
Sbjct:   532 ILQEIGSERTMVFVKTKKKADFIATFLCQEKVPSTSIHGDREQKE 576


>UNIPROTKB|G5E631 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:2001243 "negative regulation of intrinsic apoptotic
            signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
            of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
            "intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
            "cellular response to osmotic stress" evidence=IEA] [GO:0071243
            "cellular response to arsenic-containing substance" evidence=IEA]
            [GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
            "positive regulation of translational initiation" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
            response" evidence=IEA] [GO:0043280 "positive regulation of
            cysteine-type endopeptidase activity involved in apoptotic process"
            evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
            endopeptidase activity involved in apoptotic process" evidence=IEA]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=IEA] [GO:0043065 "positive regulation of apoptotic
            process" evidence=IEA] [GO:0043024 "ribosomal small subunit
            binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
            evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
            [GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
            "negative regulation of protein complex assembly" evidence=IEA]
            [GO:0030308 "negative regulation of cell growth" evidence=IEA]
            [GO:0030307 "positive regulation of cell growth" evidence=IEA]
            [GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
            [GO:0017148 "negative regulation of translation" evidence=IEA]
            [GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
            [GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
            "response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
            signaling pathway via death domain receptors" evidence=IEA]
            [GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
            [GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IEA] [GO:0007243
            "intracellular protein kinase cascade" evidence=IEA] [GO:0007059
            "chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
            translation initiation factor 3 complex" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654
            OMA:KYERGGN EMBL:DAAA02073612 RefSeq:NP_001179891.1 UniGene:Bt.9783
            PRIDE:G5E631 Ensembl:ENSBTAT00000050399 GeneID:510093
            KEGG:bta:510093 NextBio:20869274 Uniprot:G5E631
        Length = 661

 Score = 168 (64.2 bits), Expect = 1.5e-11, P = 1.5e-11
 Identities = 51/168 (30%), Positives = 81/168 (48%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             DL +  C +L++TP                 +YLVLDEAD++ ++G     I  +V+  +
Sbjct:   311 DLER-GCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMG-FEPQIRRIVEQDT 368

Query:    70 NPSI-VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 126
              P   VR   +FSAT P  ++ LAR  + + + + VGR  + SE+I QK+V+    + + 
Sbjct:   369 MPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRS 428

Query:   127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
               L    A   +   L+FV++K  A  L   L  +      IH D SQ
Sbjct:   429 FLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQ 476


>UNIPROTKB|F1RX16 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:2001243 "negative regulation of intrinsic apoptotic
            signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
            of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
            "intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
            "cellular response to osmotic stress" evidence=IEA] [GO:0071243
            "cellular response to arsenic-containing substance" evidence=IEA]
            [GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
            "positive regulation of translational initiation" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
            response" evidence=IEA] [GO:0043280 "positive regulation of
            cysteine-type endopeptidase activity involved in apoptotic process"
            evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
            endopeptidase activity involved in apoptotic process" evidence=IEA]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=IEA] [GO:0043065 "positive regulation of apoptotic
            process" evidence=IEA] [GO:0043024 "ribosomal small subunit
            binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
            evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
            [GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
            "negative regulation of protein complex assembly" evidence=IEA]
            [GO:0030308 "negative regulation of cell growth" evidence=IEA]
            [GO:0030307 "positive regulation of cell growth" evidence=IEA]
            [GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
            [GO:0017148 "negative regulation of translation" evidence=IEA]
            [GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
            [GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
            "response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
            signaling pathway via death domain receptors" evidence=IEA]
            [GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
            [GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IEA] [GO:0007243
            "intracellular protein kinase cascade" evidence=IEA] [GO:0007059
            "chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
            translation initiation factor 3 complex" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00620000087942 OMA:KYERGGN
            EMBL:CU861899 Ensembl:ENSSSCT00000013398 Uniprot:F1RX16
        Length = 661

 Score = 168 (64.2 bits), Expect = 1.5e-11, P = 1.5e-11
 Identities = 51/168 (30%), Positives = 81/168 (48%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             DL +  C +L++TP                 +YLVLDEAD++ ++G     I  +V+  +
Sbjct:   312 DLER-GCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMG-FEPQIRRIVEQDT 369

Query:    70 NPSI-VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 126
              P   VR   +FSAT P  ++ LAR  + + + + VGR  + SE+I QK+V+    + + 
Sbjct:   370 MPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRS 429

Query:   127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
               L    A   +   L+FV++K  A  L   L  +      IH D SQ
Sbjct:   430 FLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQ 477


>UNIPROTKB|J9P0V9 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654 EMBL:AAEX03026295
            RefSeq:XP_861268.1 Ensembl:ENSCAFT00000045177 GeneID:480886
            KEGG:cfa:480886 Uniprot:J9P0V9
        Length = 662

 Score = 168 (64.2 bits), Expect = 1.5e-11, P = 1.5e-11
 Identities = 51/168 (30%), Positives = 81/168 (48%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             DL +  C +L++TP                 +YLVLDEAD++ ++G     I  +V+  +
Sbjct:   312 DLER-GCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMG-FEPQIRRIVEQDT 369

Query:    70 NPSI-VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 126
              P   VR   +FSAT P  ++ LAR  + + + + VGR  + SE+I QK+V+    + + 
Sbjct:   370 MPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRS 429

Query:   127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
               L    A   +   L+FV++K  A  L   L  +      IH D SQ
Sbjct:   430 FLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQ 477


>UNIPROTKB|O00571 [details] [associations]
            symbol:DDX3X "ATP-dependent RNA helicase DDX3X"
            species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005741
            "mitochondrial outer membrane" evidence=IEA] [GO:0016607 "nuclear
            speck" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030307 "positive
            regulation of cell growth" evidence=IMP] [GO:0005852 "eukaryotic
            translation initiation factor 3 complex" evidence=IDA] [GO:1900087
            "positive regulation of G1/S transition of mitotic cell cycle"
            evidence=IMP] [GO:0045948 "positive regulation of translational
            initiation" evidence=IMP] [GO:0031333 "negative regulation of
            protein complex assembly" evidence=IDA] [GO:0008190 "eukaryotic
            initiation factor 4E binding" evidence=IDA] [GO:0017148 "negative
            regulation of translation" evidence=IMP] [GO:0034063 "stress
            granule assembly" evidence=IDA] [GO:0010494 "cytoplasmic stress
            granule" evidence=IDA] [GO:0071470 "cellular response to osmotic
            stress" evidence=IDA] [GO:0071243 "cellular response to
            arsenic-containing substance" evidence=IDA] [GO:2001243 "negative
            regulation of intrinsic apoptotic signaling pathway" evidence=IMP]
            [GO:0007059 "chromosome segregation" evidence=IMP] [GO:0022627
            "cytosolic small ribosomal subunit" evidence=IDA] [GO:0045727
            "positive regulation of translation" evidence=IDA] [GO:0008143
            "poly(A) RNA binding" evidence=IDA] [GO:0031369 "translation
            initiation factor binding" evidence=IDA] [GO:0042256 "mature
            ribosome assembly" evidence=IMP] [GO:0043024 "ribosomal small
            subunit binding" evidence=IDA] [GO:0003723 "RNA binding"
            evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0016887
            "ATPase activity" evidence=IDA] [GO:0004003 "ATP-dependent DNA
            helicase activity" evidence=IDA] [GO:0004004 "ATP-dependent RNA
            helicase activity" evidence=IDA] [GO:0045944 "positive regulation
            of transcription from RNA polymerase II promoter" evidence=IMP;IDA]
            [GO:0009615 "response to virus" evidence=IDA] [GO:0007243
            "intracellular protein kinase cascade" evidence=IDA] [GO:0032728
            "positive regulation of interferon-beta production" evidence=TAS]
            [GO:0045087 "innate immune response" evidence=IMP] [GO:0071651
            "positive regulation of chemokine (C-C motif) ligand 5 production"
            evidence=TAS] [GO:0035613 "RNA stem-loop binding" evidence=IDA]
            [GO:0010501 "RNA secondary structure unwinding" evidence=IDA]
            [GO:0048027 "mRNA 5'-UTR binding" evidence=IDA] [GO:0008134
            "transcription factor binding" evidence=IDA] [GO:0030308 "negative
            regulation of cell growth" evidence=IDA] [GO:0008625 "extrinsic
            apoptotic signaling pathway via death domain receptors"
            evidence=IMP] [GO:0043066 "negative regulation of apoptotic
            process" evidence=IMP] [GO:0043154 "negative regulation of
            cysteine-type endopeptidase activity involved in apoptotic process"
            evidence=IMP] [GO:0097193 "intrinsic apoptotic signaling pathway"
            evidence=IMP] [GO:0043280 "positive regulation of cysteine-type
            endopeptidase activity involved in apoptotic process" evidence=IMP]
            [GO:0043065 "positive regulation of apoptotic process"
            evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0006200 "ATP catabolic process" evidence=IDA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0019048
            GO:GO:0043066 GO:GO:0043154 GO:GO:0030307 GO:GO:0007059
            GO:GO:0030308 GO:GO:0005741 GO:GO:0017148 GO:GO:0003677
            GO:GO:0031333 GO:GO:0016607 GO:GO:0045944 GO:GO:0045087
            GO:GO:0007243 GO:GO:0006351 GO:GO:0009615 GO:GO:0043065
            GO:GO:0048027 GO:GO:0043280 GO:GO:0071470 GO:GO:0004003
            GO:GO:0097193 GO:GO:1900087 GO:GO:0008134 EMBL:CH471141
            GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
            GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
            KO:K11594 HOVERGEN:HBG015893 EMBL:U50553 EMBL:AF061337
            EMBL:AF000983 EMBL:AF000982 EMBL:AK291153 EMBL:AK304689
            EMBL:AL391647 EMBL:Z93015 EMBL:BC011819 IPI:IPI00215637
            IPI:IPI00985384 RefSeq:NP_001180346.1 RefSeq:NP_001347.3
            UniGene:Hs.380774 PDB:2I4I PDB:2JGN PDB:3JRV PDBsum:2I4I
            PDBsum:2JGN PDBsum:3JRV ProteinModelPortal:O00571 SMR:O00571
            DIP:DIP-27551N IntAct:O00571 MINT:MINT-93217 STRING:O00571
            PhosphoSite:O00571 REPRODUCTION-2DPAGE:IPI00215637
            SWISS-2DPAGE:O00571 PaxDb:O00571 PeptideAtlas:O00571 PRIDE:O00571
            Ensembl:ENST00000399959 Ensembl:ENST00000457138 GeneID:1654
            KEGG:hsa:1654 UCSC:uc004dfe.3 CTD:1654 GeneCards:GC0XP041192
            HGNC:HGNC:2745 HPA:HPA001648 HPA:HPA005631 MIM:300160
            neXtProt:NX_O00571 PharmGKB:PA27216 InParanoid:O00571 OMA:KYERGGN
            OrthoDB:EOG47D9FV PhylomeDB:O00571 BindingDB:O00571
            ChEMBL:CHEMBL5553 ChiTaRS:DDX3X EvolutionaryTrace:O00571
            GenomeRNAi:1654 NextBio:6810 ArrayExpress:O00571 Bgee:O00571
            CleanEx:HS_DDX3X Genevestigator:O00571 GermOnline:ENSG00000124487
            GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 GO:GO:0071651
            GO:GO:0032728 Uniprot:O00571
        Length = 662

 Score = 168 (64.2 bits), Expect = 1.5e-11, P = 1.5e-11
 Identities = 51/168 (30%), Positives = 81/168 (48%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             DL +  C +L++TP                 +YLVLDEAD++ ++G     I  +V+  +
Sbjct:   312 DLER-GCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMG-FEPQIRRIVEQDT 369

Query:    70 NPSI-VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 126
              P   VR   +FSAT P  ++ LAR  + + + + VGR  + SE+I QK+V+    + + 
Sbjct:   370 MPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRS 429

Query:   127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
               L    A   +   L+FV++K  A  L   L  +      IH D SQ
Sbjct:   430 FLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQ 477


>UNIPROTKB|I3LDV0 [details] [associations]
            symbol:DDX3Y "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 OMA:TILWVYE EMBL:FP565155
            Ensembl:ENSSSCT00000028884 Uniprot:I3LDV0
        Length = 667

 Score = 168 (64.2 bits), Expect = 1.5e-11, P = 1.5e-11
 Identities = 51/168 (30%), Positives = 81/168 (48%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             DL +  C +L++TP                 +YLVLDEAD++ ++G     I  +V+  +
Sbjct:   313 DLER-GCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMG-FEPQIRRIVEQDT 370

Query:    70 NPSI-VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 126
              P   VR   +FSAT P  ++ LAR  + + + + VGR  + SE+I QK+V+    + + 
Sbjct:   371 MPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRS 430

Query:   127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
               L    A   +   L+FV++K  A  L   L  +      IH D SQ
Sbjct:   431 FLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQ 478


>UNIPROTKB|E2RRQ7 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AAEX03026295
            Ensembl:ENSCAFT00000022643 Uniprot:E2RRQ7
        Length = 706

 Score = 168 (64.2 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 52/170 (30%), Positives = 83/170 (48%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             DL +  C +L++TP                 +YLVLDEAD++ ++G     I  +V+  +
Sbjct:   354 DLER-GCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMG-FEPQIRRIVEQDT 411

Query:    70 NPSI-VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK- 125
              P   VR   +FSAT P  ++ LAR  + + + + VGR  + SE+I QK+V+    + + 
Sbjct:   412 MPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRS 471

Query:   126 -LLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
              LL L  +     +   L+FV++K  A  L   L  +      IH D SQ
Sbjct:   472 FLLDLLNATESGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQ 521


>WB|WBGene00002244 [details] [associations]
            symbol:laf-1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
            [GO:0002119 "nematode larval development" evidence=IMP] [GO:0042006
            "masculinization of hermaphroditic germ-line" evidence=IMP]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
            evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
            GO:GO:0040007 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
            HOGENOM:HOG000268804 KO:K11594 GO:GO:0042006 EMBL:FO081822
            EMBL:FJ348231 RefSeq:NP_001254859.1 UniGene:Cel.25045
            ProteinModelPortal:D0PV95 SMR:D0PV95 GeneID:190611
            KEGG:cel:CELE_Y71H2AM.19 CTD:190611 WormBase:Y71H2AM.19b
            ArrayExpress:D0PV95 Uniprot:D0PV95
        Length = 708

 Score = 168 (64.2 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 50/166 (30%), Positives = 80/166 (48%)

Query:    13 KFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
             +  C ILI+TP                  YLVLDEAD++ ++G     I  +V+    PS
Sbjct:   364 RLGCHILIATPGRLIDVMDQGLIGMEGCRYLVLDEADRMLDMG-FEPQIRQIVECNRMPS 422

Query:    73 I---VRSLFSATLPDFVEELARSIMHDA-VRVIVGRKNTASESIKQKLVFAGSEEGKLLA 128
                 + ++FSAT P  ++ LA+  + +  V + VGR  + SE+I QK+V+   +E +   
Sbjct:   423 KEERITAMFSATFPKEIQLLAQDFLKENYVFLAVGRVGSTSENIMQKIVWVEEDEKRSYL 482

Query:   129 LRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
             +    A   +   L+FV++K  A +L   L   +     IH DL Q
Sbjct:   483 MDLLDATGDSSLTLVFVETKRGASDLAYYLNRQNYEVVTIHGDLKQ 528


>UNIPROTKB|Q9KLH6 [details] [associations]
            symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD box
            family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
            N16961" [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            [GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
            OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
            DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
            ProtClustDB:CLSK869757 Uniprot:Q9KLH6
        Length = 422

 Score = 164 (62.8 bits), Expect = 1.8e-11, P = 1.8e-11
 Identities = 48/158 (30%), Positives = 78/158 (49%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
             DILI+TP               +VE LVLDEAD++ ++G  +  +  V++  S P     
Sbjct:   133 DILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMG-FMPDLQRVLRRLS-PLRQTL 190

Query:    77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
              FSAT    ++ +A  IM D + V V   N+ +E+++Q +V+   ++ K   L       
Sbjct:   191 FFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAETVQQ-MVYPVDKKRKRELLSYLIGSK 249

Query:   137 LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
                 VL+F +++  +  L  EL  D I+A  I+ D SQ
Sbjct:   250 NWQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQ 287


>TIGR_CMR|VC_A0768 [details] [associations]
            symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008152
            "metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
            OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
            DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
            ProtClustDB:CLSK869757 Uniprot:Q9KLH6
        Length = 422

 Score = 164 (62.8 bits), Expect = 1.8e-11, P = 1.8e-11
 Identities = 48/158 (30%), Positives = 78/158 (49%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
             DILI+TP               +VE LVLDEAD++ ++G  +  +  V++  S P     
Sbjct:   133 DILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMG-FMPDLQRVLRRLS-PLRQTL 190

Query:    77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
              FSAT    ++ +A  IM D + V V   N+ +E+++Q +V+   ++ K   L       
Sbjct:   191 FFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAETVQQ-MVYPVDKKRKRELLSYLIGSK 249

Query:   137 LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
                 VL+F +++  +  L  EL  D I+A  I+ D SQ
Sbjct:   250 NWQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQ 287


>UNIPROTKB|D3IVZ2 [details] [associations]
            symbol:DDX3Y "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 EMBL:DAAA02075532
            EMBL:GQ259590 IPI:IPI00955537 UniGene:Bt.89461
            Ensembl:ENSBTAT00000065838 OMA:MSHEAVK Uniprot:D3IVZ2
        Length = 661

 Score = 167 (63.8 bits), Expect = 1.9e-11, P = 1.9e-11
 Identities = 50/168 (29%), Positives = 81/168 (48%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             DL +  C +L++TP                 +YLVLDEAD++ ++G     I  +++  +
Sbjct:   312 DLER-GCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMG-FEPQIRRIIEQDT 369

Query:    70 NPSI-VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 126
              P   VR   +FSAT P  ++ LAR  + + + + VGR  + SE+I QK+V+    + + 
Sbjct:   370 MPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRS 429

Query:   127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
               L    A   +   L+FV++K  A  L   L  +      IH D SQ
Sbjct:   430 FLLDLLNATGTDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQ 477


>WB|WBGene00008119 [details] [associations]
            symbol:C46F11.4 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0000003 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
            HOGENOM:HOG000268793 KO:K12835 GeneTree:ENSGT00610000086076
            OMA:QEYANLM EMBL:Z81449 PIR:T19974 RefSeq:NP_497743.1
            ProteinModelPortal:Q93382 SMR:Q93382 STRING:Q93382 PaxDb:Q93382
            EnsemblMetazoa:C46F11.4 GeneID:175469 KEGG:cel:CELE_C46F11.4
            UCSC:C46F11.4 CTD:175469 WormBase:C46F11.4 InParanoid:Q93382
            NextBio:888300 Uniprot:Q93382
        Length = 811

 Score = 168 (64.2 bits), Expect = 2.0e-11, P = 2.0e-11
 Identities = 51/175 (29%), Positives = 86/175 (49%)

Query:     7 RSTDLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVK 66
             +S +L     ++++ TP               R  +LV DEAD++F++G      +  VK
Sbjct:   381 QSNELQNEGAEMVVCTPGRIIDLVKMGATNFLRTTFLVFDEADRMFDMG-----FEAQVK 435

Query:    67 ACSN---PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEE 123
             + S+   P     +FSAT    VE LAR  + D VR++ G    A+  I+QK+    +++
Sbjct:   436 SISDHVRPDRQCLMFSATFKQKVERLARDALVDPVRIVQGEVGEANADIEQKVFVMQNQD 495

Query:   124 GKLLALRQSFAE--SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
              KL  L ++  E  SL   VLIFV  K  ++++  +L   D    ++H D+ Q +
Sbjct:   496 VKLHWLIRNLVEFASLGK-VLIFVTKKLDSEDVAKKLKMKDFDIVLLHGDMLQAE 549


>ZFIN|ZDB-GENE-980526-150 [details] [associations]
            symbol:pl10 "pl10" species:7955 "Danio rerio"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            ZFIN:ZDB-GENE-980526-150 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 KO:K11594 HOVERGEN:HBG015893
            EMBL:BC059794 IPI:IPI00483337 RefSeq:NP_571016.2 UniGene:Dr.75779
            ProteinModelPortal:Q6PBB2 SMR:Q6PBB2 GeneID:30116 KEGG:dre:30116
            CTD:30116 InParanoid:Q6PBB2 NextBio:20806595 ArrayExpress:Q6PBB2
            Uniprot:Q6PBB2
        Length = 688

 Score = 167 (63.8 bits), Expect = 2.1e-11, P = 2.1e-11
 Identities = 51/168 (30%), Positives = 80/168 (47%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             DL +  C +L++TP                  YLVLDEAD++ ++G     I  +V+  +
Sbjct:   344 DLER-GCHLLVATPGRLLDMMERGKIGLDYCNYLVLDEADRMLDMG-FEPQIRRIVEQDT 401

Query:    70 NPSI-VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 126
              P   +R   +FSAT P  ++ LAR  + D + + VGR  + SE+I QK+V+    + + 
Sbjct:   402 MPPKGLRQTMMFSATFPKEIQILARDFLEDYIFLAVGRVGSTSENITQKVVWVEENDKRS 461

Query:   127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
               L    A   +   L+FV++K  A  L   L  +      IH D SQ
Sbjct:   462 FLLDLLNATGKDSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQ 509


>ZFIN|ZDB-GENE-030131-1565 [details] [associations]
            symbol:ddx3 "DEAD (Asp-Glu-Ala-Asp) box
            polypeptide 3" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005575
            "cellular_component" evidence=ND] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 ZFIN:ZDB-GENE-030131-1565 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
            KO:K11594 HOVERGEN:HBG015893 EMBL:BX545856 IPI:IPI00639693
            RefSeq:NP_001119895.1 UniGene:Dr.104653 SMR:B0S6P6
            Ensembl:ENSDART00000006867 GeneID:566947 KEGG:dre:566947 CTD:566947
            OMA:IIMGNIN NextBio:20888452 Uniprot:B0S6P6
        Length = 709

 Score = 166 (63.5 bits), Expect = 2.7e-11, P = 2.7e-11
 Identities = 50/168 (29%), Positives = 80/168 (47%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             DL +  C +L++TP                 +YLVLDEAD++ ++G     I  +V+  +
Sbjct:   360 DLER-GCHLLVATPGRLVDMMERGKIGLDYCKYLVLDEADRMLDMG-FEPQIRRIVEQDT 417

Query:    70 NP---SIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 126
              P   S    +FSAT P  ++ LAR  + + + + VGR  + SE+I QK+V+    + + 
Sbjct:   418 MPPKGSRQTMMFSATFPKEIQILARDFLEEYIFLAVGRVGSTSENITQKVVWVEENDKRS 477

Query:   127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
               L    A   +   L+FV++K  A  L   L  +      IH D SQ
Sbjct:   478 FLLDLLNATGKDSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQ 525


>TAIR|locus:2076351 [details] [associations]
            symbol:AT3G58510 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005886
            "plasma membrane" evidence=IDA] [GO:0005777 "peroxisome"
            evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
            GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730
            GO:GO:0005777 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 EMBL:AL137082 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K11594
            EMBL:AY088091 EMBL:AY062446 EMBL:AY114637 EMBL:AJ010463
            IPI:IPI00521485 PIR:T45671 PIR:T51742 RefSeq:NP_001030884.1
            RefSeq:NP_567067.1 RefSeq:NP_974455.1 UniGene:At.22801
            UniGene:At.70259 ProteinModelPortal:Q8LA13 SMR:Q8LA13 IntAct:Q8LA13
            STRING:Q8LA13 PaxDb:Q8LA13 PRIDE:Q8LA13 EnsemblPlants:AT3G58510.1
            EnsemblPlants:AT3G58510.2 EnsemblPlants:AT3G58510.3 GeneID:825020
            KEGG:ath:AT3G58510 GeneFarm:927 TAIR:At3g58510 InParanoid:Q8LA13
            OMA:FCAPDEA PhylomeDB:Q8LA13 ProtClustDB:CLSN2683925
            Genevestigator:Q8LA13 GermOnline:AT3G58510 Uniprot:Q8LA13
        Length = 612

 Score = 165 (63.1 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 48/168 (28%), Positives = 82/168 (48%)

Query:    16 CDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI-V 74
             CDIL++TP                + +L LDEAD++ ++G     I  +V+    P   V
Sbjct:   280 CDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMG-FEPQIRKIVEQMDMPPRGV 338

Query:    75 RS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
             R   LFSAT P  ++ LA   M + + + VGR  ++++ I Q++ F    + +  L+ L 
Sbjct:   339 RQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSSTDLITQRVEFVQESDKRSHLMDLL 398

Query:   131 QSFAESLNPP--VLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
              +  E+ +     L+FV++K  A  L   L  ++  A  IH D +Q +
Sbjct:   399 HAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQE 446


>ZFIN|ZDB-GENE-030131-6215 [details] [associations]
            symbol:ddx23 "DEAD (Asp-Glu-Ala-Asp) box
            polypeptide 23" species:7955 "Danio rerio" [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-6215
            GO:GO:0005524 GO:GO:0003676 GeneTree:ENSGT00690000102171
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12858
            CTD:9416 HOGENOM:HOG000268796 HOVERGEN:HBG102054 OrthoDB:EOG46T312
            EMBL:CR936486 EMBL:CR354537 EMBL:BC060524 IPI:IPI00509665
            RefSeq:NP_956176.1 UniGene:Dr.78688 STRING:Q6P9Z2
            Ensembl:ENSDART00000019620 GeneID:334283 KEGG:dre:334283
            InParanoid:Q6P9Z2 NextBio:20810336 Uniprot:Q6P9Z2
        Length = 807

 Score = 119 (46.9 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
 Identities = 32/100 (32%), Positives = 45/100 (45%)

Query:    77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
             +F+AT+P  VE LARS +     V +G      E ++QK++   SE  K   L +  A  
Sbjct:   591 MFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVILM-SEGEKRKKLLEVLASG 649

Query:   137 LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
               PP++IFV  K     L   L      A  +H    Q Q
Sbjct:   650 FEPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQ 689

 Score = 78 (32.5 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
 Identities = 15/43 (34%), Positives = 24/43 (55%)

Query:    13 KFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVG 55
             +  C+I+I+TP              SR  Y+VLDEAD++ ++G
Sbjct:   503 RMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMG 545


>RGD|1308685 [details] [associations]
            symbol:Ddx23 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 23"
            species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0005682 "U5 snRNP"
            evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
            [GO:0005886 "plasma membrane" evidence=IEA;ISO] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISO] [GO:0071013
            "catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
            "nucleolus" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 RGD:1308685 GO:GO:0005524
            GO:GO:0003676 GeneTree:ENSGT00690000102171 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 EMBL:CH474035 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 KO:K12858 CTD:9416 OMA:PIRNWKE
            RefSeq:NP_001100263.2 UniGene:Rn.2319 Ensembl:ENSRNOT00000055529
            GeneID:300208 KEGG:rno:300208 NextBio:646540 Uniprot:G3V9M1
        Length = 819

 Score = 119 (46.9 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
 Identities = 33/100 (33%), Positives = 45/100 (45%)

Query:    77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
             +F+AT+P  VE LARS +     V +G      E ++QK VF  SE  K   L     + 
Sbjct:   603 MFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQK-VFLMSESEKRKKLLAILEQG 661

Query:   137 LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
              +PP++IFV  K     L   L      A  +H    Q Q
Sbjct:   662 FDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQ 701

 Score = 78 (32.5 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
 Identities = 15/43 (34%), Positives = 24/43 (55%)

Query:    13 KFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVG 55
             +  C+I+I+TP              SR  Y+VLDEAD++ ++G
Sbjct:   515 RMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMG 557


>UNIPROTKB|A6QLB2 [details] [associations]
            symbol:DDX23 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
            [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005739
            "mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005886
            GO:GO:0005524 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
            GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 KO:K12858 CTD:9416 HOGENOM:HOG000268796
            HOVERGEN:HBG102054 OMA:PIRNWKE OrthoDB:EOG46T312 EMBL:DAAA02012954
            EMBL:BC147902 IPI:IPI00866828 RefSeq:NP_001095672.1
            UniGene:Bt.14027 STRING:A6QLB2 Ensembl:ENSBTAT00000029071
            GeneID:537395 KEGG:bta:537395 InParanoid:A6QLB2 NextBio:20877127
            Uniprot:A6QLB2
        Length = 820

 Score = 119 (46.9 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
 Identities = 33/100 (33%), Positives = 45/100 (45%)

Query:    77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
             +F+AT+P  VE LARS +     V +G      E ++QK VF  SE  K   L     + 
Sbjct:   604 MFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQK-VFLMSESEKRKKLLAILEQG 662

Query:   137 LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
              +PP++IFV  K     L   L      A  +H    Q Q
Sbjct:   663 FDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQ 702

 Score = 78 (32.5 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
 Identities = 15/43 (34%), Positives = 24/43 (55%)

Query:    13 KFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVG 55
             +  C+I+I+TP              SR  Y+VLDEAD++ ++G
Sbjct:   516 RMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMG 558


>UNIPROTKB|E2RTL6 [details] [associations]
            symbol:DDX23 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
            [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005739
            GO:GO:0005886 GO:GO:0005524 GO:GO:0005682 GO:GO:0003676
            GO:GO:0071013 GeneTree:ENSGT00690000102171 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 KO:K12858 CTD:9416 OMA:PIRNWKE EMBL:AAEX03015077
            RefSeq:XP_851051.1 ProteinModelPortal:E2RTL6
            Ensembl:ENSCAFT00000013894 GeneID:477624 KEGG:cfa:477624
            NextBio:20853071 Uniprot:E2RTL6
        Length = 820

 Score = 119 (46.9 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
 Identities = 33/100 (33%), Positives = 45/100 (45%)

Query:    77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
             +F+AT+P  VE LARS +     V +G      E ++QK VF  SE  K   L     + 
Sbjct:   604 MFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQK-VFLMSESEKRKKLLAILEQG 662

Query:   137 LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
              +PP++IFV  K     L   L      A  +H    Q Q
Sbjct:   663 FDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQ 702

 Score = 78 (32.5 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
 Identities = 15/43 (34%), Positives = 24/43 (55%)

Query:    13 KFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVG 55
             +  C+I+I+TP              SR  Y+VLDEAD++ ++G
Sbjct:   516 RMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMG 558


>UNIPROTKB|Q9BUQ8 [details] [associations]
            symbol:DDX23 "Probable ATP-dependent RNA helicase DDX23"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000375
            "RNA splicing, via transesterification reactions" evidence=TAS]
            [GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;TAS]
            [GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=TAS] [GO:0000354
            "cis assembly of pre-catalytic spliceosome" evidence=IC]
            [GO:0005682 "U5 snRNP" evidence=IDA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IDA] [GO:0005654 "nucleoplasm"
            evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
            "gene expression" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005730 "nucleolus" evidence=IDA] [GO:0005739 "mitochondrion"
            evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
            Reactome:REACT_71 InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 EMBL:AF026402 GO:GO:0005739
            GO:GO:0005886 GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675
            GO:GO:0005682 GO:GO:0003676 EMBL:CH471111 GO:GO:0071013
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000354
            KO:K12858 EMBL:AK312379 EMBL:BC002366 IPI:IPI00006725
            RefSeq:NP_004809.2 UniGene:Hs.130098 ProteinModelPortal:Q9BUQ8
            SMR:Q9BUQ8 DIP:DIP-34974N IntAct:Q9BUQ8 MINT:MINT-1572793
            STRING:Q9BUQ8 PhosphoSite:Q9BUQ8 DMDM:160385708 PaxDb:Q9BUQ8
            PRIDE:Q9BUQ8 DNASU:9416 Ensembl:ENST00000308025 GeneID:9416
            KEGG:hsa:9416 UCSC:uc001rsm.3 CTD:9416 GeneCards:GC12M049223
            HGNC:HGNC:17347 HPA:HPA038680 MIM:612172 neXtProt:NX_Q9BUQ8
            PharmGKB:PA134934941 HOGENOM:HOG000268796 HOVERGEN:HBG102054
            InParanoid:Q9BUQ8 OMA:PIRNWKE OrthoDB:EOG46T312 PhylomeDB:Q9BUQ8
            GenomeRNAi:9416 NextBio:35278 ArrayExpress:Q9BUQ8 Bgee:Q9BUQ8
            CleanEx:HS_DDX23 Genevestigator:Q9BUQ8 GermOnline:ENSG00000174243
            Uniprot:Q9BUQ8
        Length = 820

 Score = 119 (46.9 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
 Identities = 33/100 (33%), Positives = 45/100 (45%)

Query:    77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
             +F+AT+P  VE LARS +     V +G      E ++QK VF  SE  K   L     + 
Sbjct:   604 MFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQK-VFLMSESEKRKKLLAILEQG 662

Query:   137 LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
              +PP++IFV  K     L   L      A  +H    Q Q
Sbjct:   663 FDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQ 702

 Score = 78 (32.5 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
 Identities = 15/43 (34%), Positives = 24/43 (55%)

Query:    13 KFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVG 55
             +  C+I+I+TP              SR  Y+VLDEAD++ ++G
Sbjct:   516 RMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMG 558


>MGI|MGI:103064 [details] [associations]
            symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3,
            X-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003723
            "RNA binding" evidence=ISO] [GO:0004003 "ATP-dependent DNA helicase
            activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISO] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
            [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005741
            "mitochondrial outer membrane" evidence=IEA] [GO:0006200 "ATP
            catabolic process" evidence=IEA;ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006417 "regulation
            of translation" evidence=IEA] [GO:0006915 "apoptotic process"
            evidence=IEA] [GO:0007059 "chromosome segregation" evidence=ISO]
            [GO:0007243 "intracellular protein kinase cascade" evidence=ISO]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=ISO]
            [GO:0008143 "poly(A) RNA binding" evidence=ISO] [GO:0008152
            "metabolic process" evidence=IEA] [GO:0008190 "eukaryotic
            initiation factor 4E binding" evidence=ISO] [GO:0008625 "extrinsic
            apoptotic signaling pathway via death domain receptors"
            evidence=ISO] [GO:0009615 "response to virus" evidence=ISO]
            [GO:0010494 "cytoplasmic stress granule" evidence=ISO] [GO:0010501
            "RNA secondary structure unwinding" evidence=ISO] [GO:0016020
            "membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
            [GO:0017148 "negative regulation of translation" evidence=ISO]
            [GO:0030307 "positive regulation of cell growth" evidence=ISO]
            [GO:0030308 "negative regulation of cell growth" evidence=ISO]
            [GO:0031333 "negative regulation of protein complex assembly"
            evidence=ISO] [GO:0031369 "translation initiation factor binding"
            evidence=ISO] [GO:0034063 "stress granule assembly" evidence=ISO]
            [GO:0035613 "RNA stem-loop binding" evidence=ISO] [GO:0042254
            "ribosome biogenesis" evidence=IEA] [GO:0042256 "mature ribosome
            assembly" evidence=ISO] [GO:0043024 "ribosomal small subunit
            binding" evidence=ISO] [GO:0043065 "positive regulation of
            apoptotic process" evidence=ISO] [GO:0043066 "negative regulation
            of apoptotic process" evidence=ISO] [GO:0043154 "negative
            regulation of cysteine-type endopeptidase activity involved in
            apoptotic process" evidence=ISO] [GO:0043280 "positive regulation
            of cysteine-type endopeptidase activity involved in apoptotic
            process" evidence=ISO] [GO:0045087 "innate immune response"
            evidence=ISO] [GO:0045727 "positive regulation of translation"
            evidence=ISO] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISO] [GO:0045948
            "positive regulation of translational initiation" evidence=ISO]
            [GO:0048027 "mRNA 5'-UTR binding" evidence=ISO] [GO:0071243
            "cellular response to arsenic-containing substance" evidence=ISO]
            [GO:0071470 "cellular response to osmotic stress" evidence=ISO]
            [GO:0097193 "intrinsic apoptotic signaling pathway" evidence=ISO]
            [GO:1900087 "positive regulation of G1/S transition of mitotic cell
            cycle" evidence=ISO] [GO:2001243 "negative regulation of intrinsic
            apoptotic signaling pathway" evidence=ISO] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:103064
            GO:GO:0005524 GO:GO:0005634 GO:GO:0043066 GO:GO:0043154
            GO:GO:0030307 GO:GO:0007059 GO:GO:0005741 GO:GO:0017148
            GO:GO:0003677 GO:GO:0031333 GO:GO:0016607 GO:GO:0045944
            GO:GO:0045087 GO:GO:0007243 GO:GO:0006351 GO:GO:0009615
            GO:GO:0043065 GO:GO:0048027 GO:GO:0043280 GO:GO:0071470
            GO:GO:0004003 GO:GO:0097193 GO:GO:1900087 GO:GO:0008134
            GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
            GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
            GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 KO:K11594
            HOVERGEN:HBG015893 CTD:1654 OrthoDB:EOG47D9FV ChiTaRS:DDX3X
            GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 EMBL:Z38117 EMBL:L25126
            IPI:IPI00230035 PIR:I84741 RefSeq:NP_034158.1 UniGene:Mm.289662
            ProteinModelPortal:Q62167 SMR:Q62167 IntAct:Q62167
            MINT:MINT-1870173 STRING:Q62167 PhosphoSite:Q62167
            REPRODUCTION-2DPAGE:Q62167 PaxDb:Q62167 PRIDE:Q62167
            Ensembl:ENSMUST00000000804 GeneID:13205 KEGG:mmu:13205
            InParanoid:Q62167 NextBio:283364 Bgee:Q62167 CleanEx:MM_ERH
            Genevestigator:Q62167 GermOnline:ENSMUSG00000000787 Uniprot:Q62167
        Length = 662

 Score = 165 (63.1 bits), Expect = 3.2e-11, P = 3.2e-11
 Identities = 51/168 (30%), Positives = 81/168 (48%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             DL +  C +L++TP                 +YLVLDEAD++ ++G     I  +V+  +
Sbjct:   312 DLER-GCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMG-FEPQIRRIVEQDT 369

Query:    70 NPSI-VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 126
              P   VR   +FSAT P  ++ LAR  + + + + VGR  + SE+I QK+V+    + + 
Sbjct:   370 MPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEIDKRS 429

Query:   127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
               L    A   +   L+FV++K  A  L   L  +      IH D SQ
Sbjct:   430 FLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQ 477


>RGD|1564771 [details] [associations]
            symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
            X-linked" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 RGD:1564771 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
            OMA:KYERGGN OrthoDB:EOG47D9FV IPI:IPI00362534 PhosphoSite:D4ADE8
            PRIDE:D4ADE8 Ensembl:ENSRNOT00000039551 UCSC:RGD:1564771
            Uniprot:D4ADE8
        Length = 662

 Score = 165 (63.1 bits), Expect = 3.2e-11, P = 3.2e-11
 Identities = 51/168 (30%), Positives = 81/168 (48%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             DL +  C +L++TP                 +YLVLDEAD++ ++G     I  +V+  +
Sbjct:   312 DLER-GCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMG-FEPQIRRIVEQDT 369

Query:    70 NPSI-VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 126
              P   VR   +FSAT P  ++ LAR  + + + + VGR  + SE+I QK+V+    + + 
Sbjct:   370 MPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEIDKRS 429

Query:   127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
               L    A   +   L+FV++K  A  L   L  +      IH D SQ
Sbjct:   430 FLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQ 477


>GENEDB_PFALCIPARUM|PF10_0209 [details] [associations]
            symbol:PF10_0209 "RNA helicase, putative"
            species:5833 "Plasmodium falciparum" [GO:0003724 "RNA helicase
            activity" evidence=ISS] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            EMBL:AE014185 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 GO:GO:0003724 HSSP:P10081 RefSeq:XP_001347493.1
            ProteinModelPortal:Q8IJI8 EnsemblProtists:PF10_0209:mRNA
            GeneID:810366 KEGG:pfa:PF10_0209 EuPathDB:PlasmoDB:PF3D7_1021500
            HOGENOM:HOG000284466 OMA:YNTICIS ProtClustDB:CLSZ2514698
            Uniprot:Q8IJI8
        Length = 680

 Score = 165 (63.1 bits), Expect = 3.3e-11, P = 3.3e-11
 Identities = 40/119 (33%), Positives = 67/119 (56%)

Query:    42 YLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVI 101
             ++V DE DKLFE+   L+ ++ ++K   N  I +   +ATLP  ++    ++  +   V 
Sbjct:   385 FIVFDEVDKLFEI-KFLEQVNTLLKEIQNRKIQKIFTTATLPGNIKNFISTLCPNYTVVY 443

Query:   102 VGRK-NTASESIKQKLVFAGSEEGKLLALRQSFA-ESLNPPVLIFVQSKDRAKELYGEL 158
              G+  NT + +IKQ+L++  +EE KLL L      + ++ PVLIFV S  +A  +Y  L
Sbjct:   444 FGKNINTINNNIKQELLYVNNEEEKLLVLNNLIKNKEIHIPVLIFVDSIIKANMIYTNL 502


>UNIPROTKB|Q8IJI8 [details] [associations]
            symbol:PF10_0209 "RNA helicase, putative" species:36329
            "Plasmodium falciparum 3D7" [GO:0003724 "RNA helicase activity"
            evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014185
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GO:GO:0003724 HSSP:P10081 RefSeq:XP_001347493.1
            ProteinModelPortal:Q8IJI8 EnsemblProtists:PF10_0209:mRNA
            GeneID:810366 KEGG:pfa:PF10_0209 EuPathDB:PlasmoDB:PF3D7_1021500
            HOGENOM:HOG000284466 OMA:YNTICIS ProtClustDB:CLSZ2514698
            Uniprot:Q8IJI8
        Length = 680

 Score = 165 (63.1 bits), Expect = 3.3e-11, P = 3.3e-11
 Identities = 40/119 (33%), Positives = 67/119 (56%)

Query:    42 YLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVI 101
             ++V DE DKLFE+   L+ ++ ++K   N  I +   +ATLP  ++    ++  +   V 
Sbjct:   385 FIVFDEVDKLFEI-KFLEQVNTLLKEIQNRKIQKIFTTATLPGNIKNFISTLCPNYTVVY 443

Query:   102 VGRK-NTASESIKQKLVFAGSEEGKLLALRQSFA-ESLNPPVLIFVQSKDRAKELYGEL 158
              G+  NT + +IKQ+L++  +EE KLL L      + ++ PVLIFV S  +A  +Y  L
Sbjct:   444 FGKNINTINNNIKQELLYVNNEEEKLLVLNNLIKNKEIHIPVLIFVDSIIKANMIYTNL 502


>UNIPROTKB|F1NIX2 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 EMBL:AADN02011031 IPI:IPI00579247
            Ensembl:ENSGALT00000026171 ArrayExpress:F1NIX2 Uniprot:F1NIX2
        Length = 636

 Score = 164 (62.8 bits), Expect = 3.8e-11, P = 3.8e-11
 Identities = 51/168 (30%), Positives = 81/168 (48%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             DL +  C +L++TP                 +YLVLDEAD++ ++G     I  +V+  +
Sbjct:   289 DLER-GCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMG-FEPQIRRIVEQDT 346

Query:    70 NPSI-VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 126
              P   VR   +FSAT P  ++ LAR  + + + + VGR  + SE+I QK+V+    + + 
Sbjct:   347 MPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEELDKRS 406

Query:   127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
               L    A   +   L+FV++K  A  L   L  +      IH D SQ
Sbjct:   407 FLLDLLNATGKDSLTLVFVETKKGADALEDFLYHEGYACTSIHGDRSQ 454


>UNIPROTKB|F1NIX1 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AADN02011031
            IPI:IPI00822944 Ensembl:ENSGALT00000026172 ArrayExpress:F1NIX1
            Uniprot:F1NIX1
        Length = 638

 Score = 164 (62.8 bits), Expect = 3.8e-11, P = 3.8e-11
 Identities = 51/168 (30%), Positives = 81/168 (48%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             DL +  C +L++TP                 +YLVLDEAD++ ++G     I  +V+  +
Sbjct:   290 DLER-GCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMG-FEPQIRRIVEQDT 347

Query:    70 NPSI-VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 126
              P   VR   +FSAT P  ++ LAR  + + + + VGR  + SE+I QK+V+    + + 
Sbjct:   348 MPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEELDKRS 407

Query:   127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
               L    A   +   L+FV++K  A  L   L  +      IH D SQ
Sbjct:   408 FLLDLLNATGKDSLTLVFVETKKGADALEDFLYHEGYACTSIHGDRSQ 455


>UNIPROTKB|B4DXX7 [details] [associations]
            symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
            sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893
            UniGene:Hs.99120 HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK302172
            IPI:IPI00646152 SMR:B4DXX7 STRING:B4DXX7 Ensembl:ENST00000537441
            UCSC:uc011nar.1 Uniprot:B4DXX7
        Length = 657

 Score = 164 (62.8 bits), Expect = 4.0e-11, P = 4.0e-11
 Identities = 51/168 (30%), Positives = 81/168 (48%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             DL +  C +L++TP                 +YLVLDEAD++ ++G     I  +V+  +
Sbjct:   307 DLER-GCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMG-FEPQIRRIVEQDT 364

Query:    70 NPSI-VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 126
              P   VR   +FSAT P  ++ LAR  + + + + VGR  + SE+I QK+V+    + + 
Sbjct:   365 MPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEDLDKRS 424

Query:   127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
               L    A   +   L+FV++K  A  L   L  +      IH D SQ
Sbjct:   425 FLLDILGATGSDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQ 472


>UNIPROTKB|O15523 [details] [associations]
            symbol:DDX3Y "ATP-dependent RNA helicase DDX3Y"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0003677 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 Orphanet:1646
            HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 HPA:HPA001648
            HPA:HPA005631 OrthoDB:EOG47D9FV EMBL:AF000985 EMBL:AF000984
            EMBL:BC034942 IPI:IPI00293616 RefSeq:NP_001116137.1
            RefSeq:NP_004651.2 UniGene:Hs.99120 ProteinModelPortal:O15523
            SMR:O15523 IntAct:O15523 MINT:MINT-2999090 STRING:O15523
            PhosphoSite:O15523 PaxDb:O15523 PRIDE:O15523
            Ensembl:ENST00000336079 Ensembl:ENST00000360160 GeneID:8653
            KEGG:hsa:8653 UCSC:uc004fsu.1 CTD:8653 GeneCards:GC0YP015016
            HGNC:HGNC:2699 MIM:400010 neXtProt:NX_O15523 PharmGKB:PA27168
            InParanoid:O15523 OMA:GNWANAN PhylomeDB:O15523 GenomeRNAi:8653
            NextBio:32449 ArrayExpress:O15523 Bgee:O15523 CleanEx:HS_DDX3Y
            Genevestigator:O15523 GermOnline:ENSG00000067048 Uniprot:O15523
        Length = 660

 Score = 164 (62.8 bits), Expect = 4.0e-11, P = 4.0e-11
 Identities = 51/168 (30%), Positives = 81/168 (48%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             DL +  C +L++TP                 +YLVLDEAD++ ++G     I  +V+  +
Sbjct:   310 DLER-GCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMG-FEPQIRRIVEQDT 367

Query:    70 NPSI-VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 126
              P   VR   +FSAT P  ++ LAR  + + + + VGR  + SE+I QK+V+    + + 
Sbjct:   368 MPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEDLDKRS 427

Query:   127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
               L    A   +   L+FV++K  A  L   L  +      IH D SQ
Sbjct:   428 FLLDILGATGSDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQ 475


>TAIR|locus:2035741 [details] [associations]
            symbol:RH20 "RNA helicase 20" species:3702 "Arabidopsis
            thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
            [GO:0005829 "cytosol" evidence=IDA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
            GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
            EMBL:AC073944 EMBL:AY062745 EMBL:AY128786 EMBL:AJ010470
            IPI:IPI00528901 PIR:B96593 PIR:T51345 RefSeq:NP_175911.1
            UniGene:At.20425 ProteinModelPortal:Q9C718 SMR:Q9C718 PaxDb:Q9C718
            PRIDE:Q9C718 ProMEX:Q9C718 EnsemblPlants:AT1G55150.1 GeneID:841958
            KEGG:ath:AT1G55150 GeneFarm:937 TAIR:At1g55150 InParanoid:Q9C718
            OMA:CANHNIL PhylomeDB:Q9C718 ProtClustDB:CLSN2682455
            Genevestigator:Q9C718 GermOnline:AT1G55150 Uniprot:Q9C718
        Length = 501

 Score = 162 (62.1 bits), Expect = 4.2e-11, P = 4.2e-11
 Identities = 52/173 (30%), Positives = 89/173 (51%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVV-KAC 68
             DL K   +I+I+TP               RV YLVLDEAD++ ++G      DP + K  
Sbjct:   218 DLQK-GVEIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMG-----FDPQIRKIV 271

Query:    69 SN--PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNT-ASESIKQKL-VFAGSEE- 123
             S+  P      +SAT P  VE+L++  +++  +VI+G  +  A+ +I+Q + V + S++ 
Sbjct:   272 SHIRPDRQTLYWSATWPKEVEQLSKKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQKY 331

Query:   124 GKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
              KL+ L +   +     +L+F+ +K    ++  +L  D   A  IH D SQ +
Sbjct:   332 NKLVKLLEDIMDGSR--ILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAE 382


>MGI|MGI:1915247 [details] [associations]
            symbol:Ddx59 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 59"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0008150 "biological_process" evidence=ND] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915247
            GO:GO:0005524 GO:GO:0046872 GO:GO:0003723 GO:GO:0005622
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
            Pfam:PF04438 PROSITE:PS51083 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
            GeneTree:ENSGT00610000086076 CTD:83479 HOGENOM:HOG000006599
            HOVERGEN:HBG106120 OMA:VTRPIID EMBL:AK004833 EMBL:AK013179
            EMBL:AK076462 EMBL:BC023840 IPI:IPI00119928 IPI:IPI00226119
            RefSeq:NP_080776.1 UniGene:Mm.385462 UniGene:Mm.486546
            ProteinModelPortal:Q9DBN9 SMR:Q9DBN9 PhosphoSite:Q9DBN9
            PRIDE:Q9DBN9 Ensembl:ENSMUST00000027655 GeneID:67997 KEGG:mmu:67997
            UCSC:uc007cut.1 UCSC:uc007cuu.2 InParanoid:Q9DBN9 OrthoDB:EOG4K9BBZ
            ChiTaRS:DDX59 NextBio:326168 Bgee:Q9DBN9 CleanEx:MM_DDX59
            Genevestigator:Q9DBN9 Uniprot:Q9DBN9
        Length = 619

 Score = 163 (62.4 bits), Expect = 4.7e-11, P = 4.7e-11
 Identities = 45/163 (27%), Positives = 83/163 (50%)

Query:    18 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 77
             ++I+TP              S ++ +V+DEAD + ++G   + +D +     +   +  L
Sbjct:   325 VIIATPGRLLDIIKQSSVSLSGIKIVVVDEADTMLKMGFQQQVLDVLEHTPGDCQTI--L 382

Query:    78 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAG--SEEGKLLALRQSFAE 135
              SAT+PD +E+L   ++H+ VR+I G KN    S++Q +++    +++ KL  +     +
Sbjct:   383 VSATIPDSIEQLTDQLLHNPVRIITGDKNLPCASVRQIILWVEDPAKKKKLFEILND-QK 441

Query:   136 SLNPPVLIFVQSKDRAKELYGELA--FDDIRAGVIHSDLSQTQ 176
                PPVL+FV  K  A +L  E       + +  IHS+ SQ +
Sbjct:   442 LFKPPVLVFVDCKLGA-DLLSEAVQKITGLNSTSIHSEKSQVE 483


>RGD|2314437 [details] [associations]
            symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 Y-linked"
            species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
            evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 RGD:2314437 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K11594 CTD:8653
            EMBL:FJ775727 IPI:IPI00196210 RefSeq:NP_001161137.1
            UniGene:Rn.95841 ProteinModelPortal:C9WPN2 PRIDE:C9WPN2
            GeneID:100312982 KEGG:rno:100312982 UCSC:RGD:2314437 Uniprot:C9WPN2
        Length = 652

 Score = 163 (62.4 bits), Expect = 5.1e-11, P = 5.1e-11
 Identities = 51/168 (30%), Positives = 81/168 (48%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             DL +  C +L++TP                 +YLVLDEAD++ ++G     I  +V+  +
Sbjct:   305 DLER-GCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMG-FEPQIRRIVEQDT 362

Query:    70 NPSI-VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 126
              P   VR   +FSAT P  ++ LAR  + + + + VGR  + SE+I QK+V+    + + 
Sbjct:   363 MPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEELDKRS 422

Query:   127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
               L    A   +   L+FV++K  A  L   L  +      IH D SQ
Sbjct:   423 FLLDLLNATGRDSLTLVFVETKKGADSLENFLFQERYACTSIHGDRSQ 470


>MGI|MGI:1349406 [details] [associations]
            symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
            Y-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 MGI:MGI:1349406 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
            HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 OrthoDB:EOG47D9FV
            CTD:8653 EMBL:AJ007376 EMBL:BC021453 EMBL:L25337 IPI:IPI00134371
            RefSeq:NP_036138.1 UniGene:Mm.486436 ProteinModelPortal:Q62095
            SMR:Q62095 STRING:Q62095 PhosphoSite:Q62095 PaxDb:Q62095
            PRIDE:Q62095 Ensembl:ENSMUST00000091190 GeneID:26900 KEGG:mmu:26900
            InParanoid:Q62095 NextBio:304749 Bgee:Q62095 Genevestigator:Q62095
            GermOnline:ENSMUSG00000069045 Uniprot:Q62095
        Length = 658

 Score = 163 (62.4 bits), Expect = 5.2e-11, P = 5.2e-11
 Identities = 51/168 (30%), Positives = 81/168 (48%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             DL +  C +L++TP                 +YLVLDEAD++ ++G     I  +V+  +
Sbjct:   311 DLER-GCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMG-FEPQIRRIVEQDT 368

Query:    70 NPSI-VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 126
              P   VR   +FSAT P  ++ LAR  + + + + VGR  + SE+I QK+V+    + + 
Sbjct:   369 MPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEELDKRS 428

Query:   127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
               L    A   +   L+FV++K  A  L   L  +      IH D SQ
Sbjct:   429 FLLDLLNATGKDSLTLVFVETKKGADSLENFLFQERYACTSIHGDRSQ 476


>UNIPROTKB|Q9KS53 [details] [associations]
            symbol:VC1407 "ATP-dependent RNA helicase RhlE"
            species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            [GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
            RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
            GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
            ProtClustDB:CLSK874358 Uniprot:Q9KS53
        Length = 397

 Score = 159 (61.0 bits), Expect = 5.7e-11, P = 5.7e-11
 Identities = 44/158 (27%), Positives = 74/158 (46%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
             D+L++TP                +E +VLDEAD++ ++G  ++ I+ ++  C    +   
Sbjct:   125 DVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMG-FIESINKIID-CLPSEVQFL 182

Query:    77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
             LFSATL   V ELA++ + D   + +     +  +I Q L+    ++ K   L     E 
Sbjct:   183 LFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITV-DKDTKSALLSHLINEQ 241

Query:   137 LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
                  LIF+++K  A +L  +L    I A   HS  SQ
Sbjct:   242 QWDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQ 279


>TIGR_CMR|VC_1407 [details] [associations]
            symbol:VC_1407 "ATP-dependent RNA helicase RhlE"
            species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008152
            "metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
            RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
            GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
            ProtClustDB:CLSK874358 Uniprot:Q9KS53
        Length = 397

 Score = 159 (61.0 bits), Expect = 5.7e-11, P = 5.7e-11
 Identities = 44/158 (27%), Positives = 74/158 (46%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
             D+L++TP                +E +VLDEAD++ ++G  ++ I+ ++  C    +   
Sbjct:   125 DVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMG-FIESINKIID-CLPSEVQFL 182

Query:    77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
             LFSATL   V ELA++ + D   + +     +  +I Q L+    ++ K   L     E 
Sbjct:   183 LFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITV-DKDTKSALLSHLINEQ 241

Query:   137 LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
                  LIF+++K  A +L  +L    I A   HS  SQ
Sbjct:   242 QWDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQ 279


>FB|FBgn0036104 [details] [associations]
            symbol:CG6418 species:7227 "Drosophila melanogaster"
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
            [GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:AE014296 GO:GO:0006200
            GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HSSP:Q58083 KO:K12835 OMA:QGVNNTA
            GeneTree:ENSGT00610000086076 EMBL:AY061400 RefSeq:NP_648413.1
            UniGene:Dm.922 SMR:Q9VTC1 IntAct:Q9VTC1 MINT:MINT-311970
            STRING:Q9VTC1 EnsemblMetazoa:FBtr0076274 GeneID:39218
            KEGG:dme:Dmel_CG6418 UCSC:CG6418-RB FlyBase:FBgn0036104
            InParanoid:Q9VTC1 OrthoDB:EOG4KKWJ0 ChiTaRS:CG6418 GenomeRNAi:39218
            NextBio:812543 Uniprot:Q9VTC1
        Length = 791

 Score = 163 (62.4 bits), Expect = 6.7e-11, P = 6.7e-11
 Identities = 48/162 (29%), Positives = 77/162 (47%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSI 73
             +I+++TP               RV +LVLDEAD++F +G      +P V++  N   P  
Sbjct:   394 EIIVATPGRMIDMVKMKATNLRRVTFLVLDEADRMFHMG-----FEPQVRSICNHVRPDR 448

Query:    74 VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 133
                +FSAT    +E LAR ++ D VR++ G  N A++ I Q +    +   K   L    
Sbjct:   449 QCLMFSATFKKRIERLARDVLSDPVRIVQGDLNEANQDITQSVYVFPNPLQKWNWLLCHL 508

Query:   134 AESLNP-PVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
              + L+   VLIFV  K  A+ +   L   +    ++H D+ Q
Sbjct:   509 VKFLSEGSVLIFVTKKVDAETVSNNLLIKEYNCLLLHGDMDQ 550


>TAIR|locus:2037416 [details] [associations]
            symbol:RCF1 "regulator of CBF gene expression 1"
            species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA;ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003723 EMBL:AC007369
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
            HOGENOM:HOG000007229 EMBL:BT002030 IPI:IPI00537100 PIR:H86341
            RefSeq:NP_173516.1 UniGene:At.41680 UniGene:At.48212
            ProteinModelPortal:Q8H0U8 SMR:Q8H0U8 PaxDb:Q8H0U8 PRIDE:Q8H0U8
            EnsemblPlants:AT1G20920.1 GeneID:838685 KEGG:ath:AT1G20920
            KEGG:dosa:Os08t0154225-00 KEGG:dosa:Os08t0159900-01 GeneFarm:1021
            TAIR:At1g20920 InParanoid:Q8H0U8 OMA:QIHSDIR PhylomeDB:Q8H0U8
            ProtClustDB:CLSN2679447 Genevestigator:Q8H0U8 GermOnline:AT1G20920
            Uniprot:Q8H0U8
        Length = 1166

 Score = 165 (63.1 bits), Expect = 6.8e-11, P = 6.8e-11
 Identities = 45/138 (32%), Positives = 72/138 (52%)

Query:    39 RVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAV 98
             RV +LV+DEAD++F++G     I  +++    P     LFSAT P  VE LAR +++  V
Sbjct:   679 RVTFLVMDEADRMFDMG-FEPQITRIIQNI-RPERQTVLFSATFPRQVETLARKVLNKPV 736

Query:    99 RVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE-SLNPPVLIFVQSKDRAKELYGE 157
              + VG ++  ++ I Q LV    E  + L L +   E S    +L+FVQS+++   LY +
Sbjct:   737 EIQVGGRSVVNKDITQ-LVEVRPESDRFLRLLELLGEWSEKGKILVFVQSQEKCDALYRD 795

Query:   158 LAFDDIRAGVIHSDLSQT 175
             +         +H    QT
Sbjct:   796 MIKSSYPCLSLHGGKDQT 813


>TIGR_CMR|SO_3783 [details] [associations]
            symbol:SO_3783 "ATP-dependent RNA helicase, DEAD box
            family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
            "nucleobase-containing compound metabolic process" evidence=ISS]
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
            GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            HSSP:Q58083 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
            RefSeq:NP_719320.1 ProteinModelPortal:Q8EAV8 GeneID:1171430
            KEGG:son:SO_3783 PATRIC:23527244 ProtClustDB:CLSK2393932
            Uniprot:Q8EAV8
        Length = 535

 Score = 159 (61.0 bits), Expect = 1.0e-10, P = 1.0e-10
 Identities = 45/159 (28%), Positives = 82/159 (51%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
             D+L++TP              +++E LVLDEAD++ ++G  ++ I  ++     P+  ++
Sbjct:   125 DVLVATPGRLLDLVQQNAVKFNQLEILVLDEADRMLDMG-FIRDIKKILALL--PAKRQN 181

Query:    77 L-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 135
             L FSAT  D + ELA+ +++  V + V  +N A+ ++KQ +      +   L ++    E
Sbjct:   182 LMFSATFSDEIRELAKGLVNHPVEISVTPRNAAATTVKQWICPVDKTQKSALLIQLIKQE 241

Query:   136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
             +    VL+F ++K  A  L   L   +I A  IH + SQ
Sbjct:   242 NWQQ-VLVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQ 279


>UNIPROTKB|F1Q073 [details] [associations]
            symbol:DDX27 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00550000074997 EMBL:AAEX03013992
            Ensembl:ENSCAFT00000018089 Uniprot:F1Q073
        Length = 767

 Score = 161 (61.7 bits), Expect = 1.1e-10, P = 1.1e-10
 Identities = 46/163 (28%), Positives = 82/163 (50%)

Query:    17 DILISTPXXXXXXXXXX-XXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
             DILI+TP               S +E L+LDEAD++ +     + +  +++ CS+     
Sbjct:   310 DILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDE-YFEEQMKEIIRMCSHHRQTM 368

Query:    76 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLV-FAGSEEGKLLALRQSF- 133
              LFSAT+ D V++LA   + + VR+ V      +  ++Q+ V    + EG   A+  +  
Sbjct:   369 -LFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFVRIRPNREGDREAIVAALL 427

Query:   134 AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
               +    V++F Q+K +A  ++  L    ++ G +H +LSQTQ
Sbjct:   428 TRTFTDHVMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQ 470


>UNIPROTKB|J9P9C6 [details] [associations]
            symbol:DDX27 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00550000074997 OMA:TRTFTDH EMBL:AAEX03013992
            Ensembl:ENSCAFT00000046251 Uniprot:J9P9C6
        Length = 788

 Score = 161 (61.7 bits), Expect = 1.1e-10, P = 1.1e-10
 Identities = 46/163 (28%), Positives = 82/163 (50%)

Query:    17 DILISTPXXXXXXXXXX-XXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
             DILI+TP               S +E L+LDEAD++ +     + +  +++ CS+     
Sbjct:   331 DILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDE-YFEEQMKEIIRMCSHHRQTM 389

Query:    76 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLV-FAGSEEGKLLALRQSF- 133
              LFSAT+ D V++LA   + + VR+ V      +  ++Q+ V    + EG   A+  +  
Sbjct:   390 -LFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFVRIRPNREGDREAIVAALL 448

Query:   134 AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
               +    V++F Q+K +A  ++  L    ++ G +H +LSQTQ
Sbjct:   449 TRTFTDHVMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQ 491


>UNIPROTKB|I3LV06 [details] [associations]
            symbol:DDX59 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
            CTD:83479 OMA:VTRPIID EMBL:FP312674 RefSeq:XP_003357711.1
            Ensembl:ENSSSCT00000031167 GeneID:100621580 KEGG:ssc:100621580
            Uniprot:I3LV06
        Length = 607

 Score = 159 (61.0 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 44/163 (26%), Positives = 83/163 (50%)

Query:    18 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 77
             ++I+TP                ++ +V+DEAD + ++G   + +D +     +   +  L
Sbjct:   313 VIIATPGRLLDIMKQSSVDLGNIKIVVVDEADTMLKMGFQEQVLDVLENVPQDCQTI--L 370

Query:    78 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAG--SEEGKLLALRQSFAE 135
              SAT+P  +E+LA  ++HD VRV+ G KN    S++Q +++    +++ KL  +     +
Sbjct:   371 VSATIPTRIEQLASRLLHDPVRVLAGEKNLPCPSVRQIVLWVEEPAKKKKLFEILND-KK 429

Query:   136 SLNPPVLIFVQSKDRAKELYGELA--FDDIRAGVIHSDLSQTQ 176
                PPVL+FV  K  A +L  E       +++  +HS+ SQ +
Sbjct:   430 LFKPPVLVFVDCKLGA-DLLSEAVEKITGLKSTSMHSEKSQIE 471


>UNIPROTKB|G3MYF0 [details] [associations]
            symbol:LOC100300937 "Uncharacterized protein" species:9913
            "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
            Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
            GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 OMA:GLKSICI EMBL:DAAA02074437
            Ensembl:ENSBTAT00000065115 Uniprot:G3MYF0
        Length = 608

 Score = 159 (61.0 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 48/169 (28%), Positives = 81/169 (47%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             D++K   DI+I+TP                + YLVLDEADK+ ++G   +H    +    
Sbjct:   320 DVTK-GVDIIIATPGRLNDLQMNNFVNLRSITYLVLDEADKMLDLG--FEHQIMKILLDV 376

Query:    70 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTAS-ESIKQKLVFAGSEEGKLLA 128
              P     + +A+ PD    LA+S +   + V VG  +  +  ++KQ ++    EE + L 
Sbjct:   377 RPDRQTVMTTASWPDSTRRLAQSYLKQPMIVYVGTLDLVTVNTVKQNIIVTTEEEKRSLV 436

Query:   129 LRQSFAESLNPP--VLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
               + F +SL+P   V++FV  K  A +L  +L+   I    +H D  Q+
Sbjct:   437 --KEFLQSLSPKDKVIVFVSRKLVADDLSSDLSIQGIPVQSLHGDREQS 483


>GENEDB_PFALCIPARUM|PF14_0437 [details] [associations]
            symbol:PF14_0437 "helicase, truncated,
            putative" species:5833 "Plasmodium falciparum" [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            EMBL:AE014187 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            RefSeq:XP_001348611.2 ProteinModelPortal:Q8IL13 IntAct:Q8IL13
            MINT:MINT-1661155 PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA
            GeneID:812019 KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
            HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
        Length = 527

 Score = 158 (60.7 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 53/163 (32%), Positives = 79/163 (48%)

Query:    18 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 77
             ILI+ P               RV YLVLDEADK+ ++G  L+ I  +V     P     +
Sbjct:   239 ILIACPGRLIDLLEQNVTNLMRVTYLVLDEADKMLDMGFELQ-IRKIVDQI-RPDRQTLM 296

Query:    78 FSATLPDFVEELARSIMHDA-VRVIVGRKN-TASESIKQKLVFAGSEE--GKLLALRQSF 133
             +SAT P  V+ LA+ +  +  ++V VG    TA  SIKQ++      E  G L +L Q  
Sbjct:   297 WSATWPKEVQALAKDLCKEQPIQVNVGSLTLTACRSIKQEIYLLEEHEKIGNLKSLLQRI 356

Query:   134 AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
              +  N  +++FV++K  A  +   L  D + A  IH D  Q +
Sbjct:   357 FKD-NDRIIVFVETKKNADFITKALRLDGMPALCIHGDKKQEE 398


>UNIPROTKB|Q8IL13 [details] [associations]
            symbol:PF14_0437 "Helicase, putative" species:36329
            "Plasmodium falciparum 3D7" [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014187
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_001348611.2
            ProteinModelPortal:Q8IL13 IntAct:Q8IL13 MINT:MINT-1661155
            PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA GeneID:812019
            KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
            HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
        Length = 527

 Score = 158 (60.7 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 53/163 (32%), Positives = 79/163 (48%)

Query:    18 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 77
             ILI+ P               RV YLVLDEADK+ ++G  L+ I  +V     P     +
Sbjct:   239 ILIACPGRLIDLLEQNVTNLMRVTYLVLDEADKMLDMGFELQ-IRKIVDQI-RPDRQTLM 296

Query:    78 FSATLPDFVEELARSIMHDA-VRVIVGRKN-TASESIKQKLVFAGSEE--GKLLALRQSF 133
             +SAT P  V+ LA+ +  +  ++V VG    TA  SIKQ++      E  G L +L Q  
Sbjct:   297 WSATWPKEVQALAKDLCKEQPIQVNVGSLTLTACRSIKQEIYLLEEHEKIGNLKSLLQRI 356

Query:   134 AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
              +  N  +++FV++K  A  +   L  D + A  IH D  Q +
Sbjct:   357 FKD-NDRIIVFVETKKNADFITKALRLDGMPALCIHGDKKQEE 398


>UNIPROTKB|Q485I3 [details] [associations]
            symbol:dbpA "ATP-dependent RNA helicase DbpA"
            species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
            InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
            ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
            KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
            BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
        Length = 468

 Score = 157 (60.3 bits), Expect = 1.3e-10, P = 1.3e-10
 Identities = 46/158 (29%), Positives = 73/158 (46%)

Query:    18 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 77
             +++ TP                +  LVLDEAD++ E+G     +D +V     P   ++L
Sbjct:   132 VIVGTPGRLEEHVIKGTLQLDNLNLLVLDEADRMLEMG-FQAALDNIVGR--TPLDRQTL 188

Query:    78 -FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
              FSAT PD ++ ++ SIM D V V +      S +I QK    G+++ +L ALR     +
Sbjct:   189 LFSATFPDQIKSISESIMTDPVMVKIASSEDQS-TISQKFFKVGNDDDRLDALRLLLLGN 247

Query:   137 LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
                   IF  +K   +++   L FD      +H DL Q
Sbjct:   248 QVESTAIFCNTKKETQQVADALHFDGFSVLALHGDLEQ 285


>TIGR_CMR|CPS_1540 [details] [associations]
            symbol:CPS_1540 "ATP-dependent RNA helicase DbpA"
            species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008150
            "biological_process" evidence=ND] [GO:0008186 "RNA-dependent ATPase
            activity" evidence=ISS] [GO:0019843 "rRNA binding" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
            GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
            InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
            ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
            KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
            BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
        Length = 468

 Score = 157 (60.3 bits), Expect = 1.3e-10, P = 1.3e-10
 Identities = 46/158 (29%), Positives = 73/158 (46%)

Query:    18 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 77
             +++ TP                +  LVLDEAD++ E+G     +D +V     P   ++L
Sbjct:   132 VIVGTPGRLEEHVIKGTLQLDNLNLLVLDEADRMLEMG-FQAALDNIVGR--TPLDRQTL 188

Query:    78 -FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
              FSAT PD ++ ++ SIM D V V +      S +I QK    G+++ +L ALR     +
Sbjct:   189 LFSATFPDQIKSISESIMTDPVMVKIASSEDQS-TISQKFFKVGNDDDRLDALRLLLLGN 247

Query:   137 LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
                   IF  +K   +++   L FD      +H DL Q
Sbjct:   248 QVESTAIFCNTKKETQQVADALHFDGFSVLALHGDLEQ 285


>UNIPROTKB|Q96GQ7 [details] [associations]
            symbol:DDX27 "Probable ATP-dependent RNA helicase DDX27"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            CTD:55661 HOVERGEN:HBG106162 KO:K13181 OMA:TRTFTDH EMBL:AY044431
            EMBL:AF336851 EMBL:AL049766 EMBL:AL357560 EMBL:BC009304
            EMBL:BC011927 EMBL:BC016060 EMBL:BC126287 EMBL:BC130275
            EMBL:BC144125 EMBL:AK022979 EMBL:AK000603 EMBL:AF193054
            EMBL:AF161377 IPI:IPI00293078 RefSeq:NP_060365.7 UniGene:Hs.129261
            UniGene:Hs.65234 ProteinModelPortal:Q96GQ7 SMR:Q96GQ7 IntAct:Q96GQ7
            MINT:MINT-1420816 STRING:Q96GQ7 PhosphoSite:Q96GQ7 DMDM:29427946
            SWISS-2DPAGE:Q96GQ7 PaxDb:Q96GQ7 PeptideAtlas:Q96GQ7 PRIDE:Q96GQ7
            DNASU:55661 Ensembl:ENST00000371764 GeneID:55661 KEGG:hsa:55661
            UCSC:uc002xuh.3 GeneCards:GC20P047835 HGNC:HGNC:15837 HPA:HPA047087
            neXtProt:NX_Q96GQ7 PharmGKB:PA27213 InParanoid:Q96GQ7
            OrthoDB:EOG4NVZJV PhylomeDB:Q96GQ7 ChiTaRS:DDX27 GenomeRNAi:55661
            NextBio:60399 ArrayExpress:Q96GQ7 Bgee:Q96GQ7 CleanEx:HS_DDX27
            Genevestigator:Q96GQ7 GermOnline:ENSG00000124228 Uniprot:Q96GQ7
        Length = 796

 Score = 160 (61.4 bits), Expect = 1.4e-10, P = 1.4e-10
 Identities = 45/163 (27%), Positives = 82/163 (50%)

Query:    17 DILISTPXXXXXXXXXX-XXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
             DILI+TP               S +E L+LDEAD++ +     + +  +++ CS+     
Sbjct:   341 DILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDE-YFEEQMKEIIRMCSHHRQTM 399

Query:    76 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLV-FAGSEEGKLLALRQSF- 133
              LFSAT+ D V++LA   + + VR+ V      +  ++Q+ +    + EG   A+  +  
Sbjct:   400 -LFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVAALL 458

Query:   134 AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
               +    V++F Q+K +A  ++  L    ++ G +H +LSQTQ
Sbjct:   459 TRTFTDHVMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQ 501


>UNIPROTKB|A1A4H6 [details] [associations]
            symbol:DDX27 "Probable ATP-dependent RNA helicase DDX27"
            species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            EMBL:BC126497 IPI:IPI00734460 RefSeq:NP_001073740.1 UniGene:Bt.2644
            ProteinModelPortal:A1A4H6 PRIDE:A1A4H6 Ensembl:ENSBTAT00000057089
            GeneID:514567 KEGG:bta:514567 CTD:55661
            GeneTree:ENSGT00550000074997 HOGENOM:HOG000265456
            HOVERGEN:HBG106162 KO:K13181 OMA:TRTFTDH NextBio:20871404
            Uniprot:A1A4H6
        Length = 765

 Score = 159 (61.0 bits), Expect = 1.7e-10, P = 1.7e-10
 Identities = 45/163 (27%), Positives = 82/163 (50%)

Query:    17 DILISTPXXXXXXXXXX-XXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
             DILI+TP               S +E L+LDEAD++ +     + +  +++ CS+     
Sbjct:   310 DILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDE-YFEEQMKEIIRMCSHHRQTM 368

Query:    76 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLV-FAGSEEGKLLALRQSFA 134
              LFSAT+ D V++LA   + + VR+ V      +  ++Q+ +    + EG   A+  +  
Sbjct:   369 -LFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVAALL 427

Query:   135 -ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
               +    V++F Q+K +A  ++  L    ++ G +H +LSQTQ
Sbjct:   428 MRTFTDHVMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQ 470


>GENEDB_PFALCIPARUM|PFE0430w [details] [associations]
            symbol:PFE0430w "ATP-dependent RNA helicase,
            putative" species:5833 "Plasmodium falciparum" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AL844504
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K12811
            RefSeq:XP_001351645.1 ProteinModelPortal:Q8I416 IntAct:Q8I416
            MINT:MINT-1560531 EnsemblProtists:PFE0430w:mRNA GeneID:812854
            KEGG:pfa:PFE0430w EuPathDB:PlasmoDB:PF3D7_0508700
            HOGENOM:HOG000284107 ProtClustDB:CLSZ2433224 Uniprot:Q8I416
        Length = 1490

 Score = 162 (62.1 bits), Expect = 1.9e-10, P = 1.9e-10
 Identities = 49/175 (28%), Positives = 82/175 (46%)

Query:     5 LVRSTDLSKFSCDILISTPXXXXXXXXXXX---XXXSRVEYLVLDEADKLFEVGNLLKHI 61
             + R   + K   +IL+ TP                 +RV ++VLDEAD+L ++G     I
Sbjct:   836 IARQLKVLKKGVEILVGTPGRIIDILTISNCKVTNLNRVSFVVLDEADRLLDLG-FESQI 894

Query:    62 DPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGS 121
               +++ C       ++ SAT P++++ +A+ +++  + +IVG K   + +I Q  V    
Sbjct:   895 YNILRNCRKDKQT-AMISATFPNYIQNMAKKLLYKPIEIIVGEKGKTNNNIYQ-FVEIIE 952

Query:   122 EEGKLLALRQSFAESLNPP-VLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
             E  K+  L +   E +    VLIFV  +  A  LY EL   D    V+H    QT
Sbjct:   953 ESKKVFRLLKLLGEWIKYGLVLIFVNKQIEADLLYLELYKYDYNLLVLHGGQDQT 1007


>UNIPROTKB|Q8I416 [details] [associations]
            symbol:PFE0430w "ATP-dependent RNA Helicase, putative"
            species:36329 "Plasmodium falciparum 3D7" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AL844504
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K12811
            RefSeq:XP_001351645.1 ProteinModelPortal:Q8I416 IntAct:Q8I416
            MINT:MINT-1560531 EnsemblProtists:PFE0430w:mRNA GeneID:812854
            KEGG:pfa:PFE0430w EuPathDB:PlasmoDB:PF3D7_0508700
            HOGENOM:HOG000284107 ProtClustDB:CLSZ2433224 Uniprot:Q8I416
        Length = 1490

 Score = 162 (62.1 bits), Expect = 1.9e-10, P = 1.9e-10
 Identities = 49/175 (28%), Positives = 82/175 (46%)

Query:     5 LVRSTDLSKFSCDILISTPXXXXXXXXXXX---XXXSRVEYLVLDEADKLFEVGNLLKHI 61
             + R   + K   +IL+ TP                 +RV ++VLDEAD+L ++G     I
Sbjct:   836 IARQLKVLKKGVEILVGTPGRIIDILTISNCKVTNLNRVSFVVLDEADRLLDLG-FESQI 894

Query:    62 DPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGS 121
               +++ C       ++ SAT P++++ +A+ +++  + +IVG K   + +I Q  V    
Sbjct:   895 YNILRNCRKDKQT-AMISATFPNYIQNMAKKLLYKPIEIIVGEKGKTNNNIYQ-FVEIIE 952

Query:   122 EEGKLLALRQSFAESLNPP-VLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
             E  K+  L +   E +    VLIFV  +  A  LY EL   D    V+H    QT
Sbjct:   953 ESKKVFRLLKLLGEWIKYGLVLIFVNKQIEADLLYLELYKYDYNLLVLHGGQDQT 1007


>UNIPROTKB|Q91372 [details] [associations]
            symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
            species:8355 "Xenopus laevis" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
            "nuclear envelope" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0007281 "germ cell development" evidence=IMP]
            [GO:0045495 "pole plasm" evidence=IDA] [GO:0071546 "pi-body"
            evidence=ISS] [GO:0071547 "piP-body" evidence=ISS] [GO:0032019
            "mitochondrial cloud" evidence=IDA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
            GO:GO:0005524 GO:GO:0005635 GO:GO:0048477 GO:GO:0007283
            GO:GO:0003676 GO:GO:0007281 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HSSP:P09052 HOVERGEN:HBG015893 CTD:54514 KO:K13982
            GO:GO:0071547 EMBL:AF046043 PIR:I51235 RefSeq:NP_001081728.1
            UniGene:Xl.256 ProteinModelPortal:Q91372 SMR:Q91372 GeneID:398019
            KEGG:xla:398019 Xenbase:XB-GENE-1016814 Uniprot:Q91372
        Length = 700

 Score = 158 (60.7 bits), Expect = 1.9e-10, P = 1.9e-10
 Identities = 49/171 (28%), Positives = 80/171 (46%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             D+ K  C+IL +TP              S++ YLVLDEAD++ ++G     I+ ++    
Sbjct:   397 DVEK-GCNILCATPGRLLDIVSKEKIGLSKLRYLVLDEADRMLDMG-FAPEIEKLMTKPG 454

Query:    70 NPSIVRS---LFSATLPDFVEELARSIMH-DAVRVIVGRKNTASESIKQKLVFAGSEEGK 125
              P+  +    +FSAT P+ +  LA + +  + + V+VG    A   + Q  V    E GK
Sbjct:   455 MPTKEKRQTLMFSATYPEEIRRLASNYLKSEHLFVVVGLVGGACSDVAQT-VLEMRENGK 513

Query:   126 LLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             +  L +    S     +IFV +K +A  + G L  +   +  IH D  Q Q
Sbjct:   514 MEKLLEILKSSEKERTMIFVNTKKKADFIAGYLCQEKFSSTSIHGDREQYQ 564


>TIGR_CMR|GSU_0914 [details] [associations]
            symbol:GSU_0914 "ATP-dependent RNA helicase RhlE"
            species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008152
            "metabolic process" evidence=ISS] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE017180
            GenomeReviews:AE017180_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 KO:K11927 OMA:KHRAKRV RefSeq:NP_951968.1
            ProteinModelPortal:Q74EP8 GeneID:2687174 KEGG:gsu:GSU0914
            PATRIC:22024603 ProtClustDB:CLSK924451
            BioCyc:GSUL243231:GH27-925-MONOMER Uniprot:Q74EP8
        Length = 447

 Score = 155 (59.6 bits), Expect = 2.0e-10, P = 2.0e-10
 Identities = 52/164 (31%), Positives = 79/164 (48%)

Query:    13 KFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
             K   +++++ P              SR+E LVLDEAD++F++G  L  I  V+K    P 
Sbjct:   118 KAGAEVVVACPGRLLDHIAQGTIDLSRLEVLVLDEADQMFDMG-FLPDIRRVLKHLP-PR 175

Query:    73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
                 LFSAT+P  +  LA+ I+ D V V VG    A  ++   L +   +  K   L + 
Sbjct:   176 RQTLLFSATMPIDIRTLAQDILVDPVTVQVGTVAPAV-TVAHAL-YPVEQHLKTPLLLEL 233

Query:   133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
                +    VLIF ++K RAK L  +L     RA  +  +LSQ +
Sbjct:   234 LRHTDTESVLIFTRTKHRAKRLGEQLEKAGYRAASLQGNLSQNR 277


>UNIPROTKB|Q0C354 [details] [associations]
            symbol:rhlE "ATP-dependent RNA helicase RhlE"
            species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
            "nucleobase-containing compound metabolic process" evidence=ISS]
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
            GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
            RefSeq:YP_759839.1 ProteinModelPortal:Q0C354 STRING:Q0C354
            GeneID:4290097 KEGG:hne:HNE_1118 PATRIC:32215041 OMA:KHGSEKL
            BioCyc:HNEP228405:GI69-1155-MONOMER Uniprot:Q0C354
        Length = 464

 Score = 155 (59.6 bits), Expect = 2.1e-10, P = 2.1e-10
 Identities = 47/160 (29%), Positives = 79/160 (49%)

Query:    18 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 77
             IL++TP               +VE L+LDEAD++ ++G  +  +  + K  + PS  ++L
Sbjct:   133 ILVATPGRLIDLMEQRAVSLDKVETLILDEADQMLDLG-FIHALRAIAK--NVPSKRQTL 189

Query:    78 F-SATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
             F SAT+P  VE LA + + +   V V    T +  I+Q++ F    E   L + +     
Sbjct:   190 FFSATMPKAVESLAATFLRNPAEVSVAPPATTAGRIEQRVCFVEQPEKASLLIEKIRDPE 249

Query:   137 LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             L   + +F ++K  A  +   LA  DI +  IH + SQ+Q
Sbjct:   250 LRSAI-VFTRTKHGADGVVKRLAKADIDSVAIHGNKSQSQ 288


>MGI|MGI:2385884 [details] [associations]
            symbol:Ddx27 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 27"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0008150
            "biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 MGI:MGI:2385884 GO:GO:0005524
            GO:GO:0005634 EMBL:CH466551 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 CTD:55661
            GeneTree:ENSGT00550000074997 HOGENOM:HOG000265456
            HOVERGEN:HBG106162 KO:K13181 OMA:TRTFTDH OrthoDB:EOG4NVZJV
            EMBL:AK134274 EMBL:AK138442 EMBL:AL591711 EMBL:BC011321
            EMBL:BC024730 EMBL:BC026381 IPI:IPI00122038 IPI:IPI00230236
            RefSeq:NP_694705.2 UniGene:Mm.295031 ProteinModelPortal:Q921N6
            SMR:Q921N6 PhosphoSite:Q921N6 PaxDb:Q921N6 PRIDE:Q921N6
            Ensembl:ENSMUST00000018143 Ensembl:ENSMUST00000150571 GeneID:228889
            KEGG:mmu:228889 UCSC:uc008nza.1 InParanoid:Q3UUG2 NextBio:379240
            Bgee:Q921N6 CleanEx:MM_DDX27 Genevestigator:Q921N6
            GermOnline:ENSMUSG00000017999 Uniprot:Q921N6
        Length = 760

 Score = 158 (60.7 bits), Expect = 2.2e-10, P = 2.2e-10
 Identities = 45/163 (27%), Positives = 82/163 (50%)

Query:    17 DILISTPXXXXXXXXXX-XXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
             DILI+TP               S +E L+LDEAD++ +     + +  +++ CS+     
Sbjct:   307 DILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDE-YFEEQMKEIIRMCSHHRQTM 365

Query:    76 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLV-FAGSEEGKLLALRQSFA 134
              LFSAT+ D V++LA   + + VR+ V      +  ++Q+ +    + EG   A+  +  
Sbjct:   366 -LFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVAALL 424

Query:   135 -ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
               +    V++F Q+K +A  ++  L    ++ G +H +LSQTQ
Sbjct:   425 MRTFTDHVMLFTQTKKQAHRMHILLGLLGLQVGELHGNLSQTQ 467


>TIGR_CMR|CPS_0174 [details] [associations]
            symbol:CPS_0174 "ATP-dependent RNA helicase RhlB"
            species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006402
            "mRNA catabolic process" evidence=ISS] HAMAP:MF_00661
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR023554 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
            GO:GO:0006401 EMBL:CP000083 GenomeReviews:CP000083_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 KO:K03732 OMA:HIDGIKY ProtClustDB:PRK04837
            RefSeq:YP_266942.1 ProteinModelPortal:Q48AH1 STRING:Q48AH1
            GeneID:3521970 KEGG:cps:CPS_0174 PATRIC:21463765
            BioCyc:CPSY167879:GI48-277-MONOMER Uniprot:Q48AH1
        Length = 428

 Score = 154 (59.3 bits), Expect = 2.3e-10, P = 2.3e-10
 Identities = 48/161 (29%), Positives = 79/161 (49%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNL--LKHI-DPVVKACSNPSI 73
             DILI T                 +E +VLDEAD++F++G +  ++++ D +  A    S+
Sbjct:   133 DILIGTCGRLIDYMKQGIYNLKNIEVIVLDEADRMFDLGFIKDIRYMFDKMPPATERLSM 192

Query:    74 VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 133
                LFSATL   V+ELA   M+D   V V  +   +  I ++L F  S E K+  L+   
Sbjct:   193 ---LFSATLSFRVKELAFDHMNDPTSVEVEPEQKTNSRISEEL-FYPSNEDKMTLLQTLI 248

Query:   134 AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
              E      ++F  +K   ++++  L  D IR G++  D+ Q
Sbjct:   249 EEDWPEKAIVFANTKHVCEKVFDHLNADKIRVGLLTGDVPQ 289


>UNIPROTKB|J3KSZ0 [details] [associations]
            symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 EMBL:AC016876 HGNC:HGNC:3282
            ChiTaRS:EIF4A1 Ensembl:ENST00000583389 Uniprot:J3KSZ0
        Length = 230

 Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
 Identities = 41/159 (25%), Positives = 70/159 (44%)

Query:    18 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 77
             I++ TP                ++  VLDEAD++   G   +  D   K  SN  +V  L
Sbjct:    37 IIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVV--L 94

Query:    78 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESL 137
              SAT+P  V E+ +  M D +R++V ++    E I+Q  +    EE KL  L   +    
Sbjct:    95 LSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLT 154

Query:   138 NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
                 +IF+ ++ +   L  ++   D     +H D+ Q +
Sbjct:   155 ITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKE 193


>UNIPROTKB|B7Z5N6 [details] [associations]
            symbol:DDX59 "cDNA FLJ56549, highly similar to Homo sapiens
            DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 (DDX59), transcript
            variant 2, mRNA" species:9606 "Homo sapiens" [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
            Pfam:PF04438 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            EMBL:AL445483 UniGene:Hs.497332 HGNC:HGNC:25360
            HOGENOM:HOG000006599 HOVERGEN:HBG106120 OrthoDB:EOG4K9BBZ
            EMBL:AK299219 IPI:IPI00514037 SMR:B7Z5N6 Ensembl:ENST00000367348
            UCSC:uc010ppl.1 Uniprot:B7Z5N6
        Length = 567

 Score = 155 (59.6 bits), Expect = 3.0e-10, P = 3.0e-10
 Identities = 45/163 (27%), Positives = 84/163 (51%)

Query:    18 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 77
             ++I+TP                V+ +V+DEAD + ++G   + +D +++   N      L
Sbjct:   325 VIIATPGRLLDIIKQSSVELCGVKIVVVDEADTMLKMGFQQQVLD-ILENIPN-DCQTIL 382

Query:    78 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAG--SEEGKLLALRQSFAE 135
              SAT+P  +E+LA  ++H+ VR+I G KN    +++Q +++    +++ KL  +     +
Sbjct:   383 VSATIPTSIEQLASQLLHNPVRIITGEKNLPCANVRQIILWVEDPAKKKKLFEILND-KK 441

Query:   136 SLNPPVLIFVQSKDRAKELYGELA--FDDIRAGVIHSDLSQTQ 176
                PPVL+FV  K  A +L  E       +++  IHS+ SQ +
Sbjct:   442 LFKPPVLVFVDCKLGA-DLLSEAVQKITGLKSISIHSEKSQIE 483


>UNIPROTKB|Q5T1V6 [details] [associations]
            symbol:DDX59 "Probable ATP-dependent RNA helicase DDX59"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0046872 "metal ion
            binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IDA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0046872
            GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 PROSITE:PS51083
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            EMBL:AL136611 EMBL:AL445483 EMBL:BC014183 EMBL:BC041801
            IPI:IPI00010449 IPI:IPI00217157 RefSeq:NP_001026895.2
            UniGene:Hs.497332 PDB:2YQP PDBsum:2YQP ProteinModelPortal:Q5T1V6
            SMR:Q5T1V6 PhosphoSite:Q5T1V6 DMDM:74762230 PaxDb:Q5T1V6
            PRIDE:Q5T1V6 DNASU:83479 Ensembl:ENST00000331314
            Ensembl:ENST00000447706 GeneID:83479 KEGG:hsa:83479 UCSC:uc009wzk.3
            CTD:83479 GeneCards:GC01M200594 HGNC:HGNC:25360 HPA:HPA047166
            neXtProt:NX_Q5T1V6 PharmGKB:PA142672000 HOGENOM:HOG000006599
            HOVERGEN:HBG106120 InParanoid:Q5T1V6 OMA:VTRPIID PhylomeDB:Q5T1V6
            EvolutionaryTrace:Q5T1V6 GenomeRNAi:83479 NextBio:72419
            ArrayExpress:Q5T1V6 Bgee:Q5T1V6 CleanEx:HS_DDX59
            Genevestigator:Q5T1V6 Uniprot:Q5T1V6
        Length = 619

 Score = 155 (59.6 bits), Expect = 3.4e-10, P = 3.4e-10
 Identities = 45/163 (27%), Positives = 84/163 (51%)

Query:    18 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 77
             ++I+TP                V+ +V+DEAD + ++G   + +D +++   N      L
Sbjct:   325 VIIATPGRLLDIIKQSSVELCGVKIVVVDEADTMLKMGFQQQVLD-ILENIPN-DCQTIL 382

Query:    78 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAG--SEEGKLLALRQSFAE 135
              SAT+P  +E+LA  ++H+ VR+I G KN    +++Q +++    +++ KL  +     +
Sbjct:   383 VSATIPTSIEQLASQLLHNPVRIITGEKNLPCANVRQIILWVEDPAKKKKLFEILND-KK 441

Query:   136 SLNPPVLIFVQSKDRAKELYGELA--FDDIRAGVIHSDLSQTQ 176
                PPVL+FV  K  A +L  E       +++  IHS+ SQ +
Sbjct:   442 LFKPPVLVFVDCKLGA-DLLSEAVQKITGLKSISIHSEKSQIE 483


>TIGR_CMR|CPS_1125 [details] [associations]
            symbol:CPS_1125 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_267868.1
            ProteinModelPortal:Q486Z7 STRING:Q486Z7 GeneID:3520292
            KEGG:cps:CPS_1125 PATRIC:21465509 OMA:AYSKYLR
            BioCyc:CPSY167879:GI48-1206-MONOMER Uniprot:Q486Z7
        Length = 466

 Score = 153 (58.9 bits), Expect = 3.5e-10, P = 3.5e-10
 Identities = 42/158 (26%), Positives = 78/158 (49%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
             D+L++TP              S++E  +LDEAD++ ++G  ++ I  ++ A         
Sbjct:   132 DVLVATPGRLLDLYNQRAVKFSQLEVFILDEADRMLDMG-FIRDIKKLMTALPKDR-QNL 189

Query:    77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
             LFSAT    +  LA+ ++++ + + V  +N+ +E + Q L  A  ++ K   L     E+
Sbjct:   190 LFSATFSPEIRALAKGMVNNPLEISVDAENSTAEKVTQWLT-AVDKKRKPAVLTHLIKEN 248

Query:   137 LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
                 VL+F ++K  A +L   L  + + A  IH + SQ
Sbjct:   249 NWQQVLVFTKTKHGANKLTKHLEAEGLTAAAIHGNKSQ 286


>ZFIN|ZDB-GENE-031001-8 [details] [associations]
            symbol:ddx27 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
            27" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 ZFIN:ZDB-GENE-031001-8 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 CTD:55661 HOGENOM:HOG000265456
            HOVERGEN:HBG106162 KO:K13181 EMBL:AY648729 IPI:IPI00501087
            RefSeq:NP_001002869.1 UniGene:Dr.76523 ProteinModelPortal:Q6DRN0
            PRIDE:Q6DRN0 GeneID:378844 KEGG:dre:378844 InParanoid:Q6DRN0
            NextBio:20813841 ArrayExpress:Q6DRN0 Bgee:Q6DRN0 Uniprot:Q6DRN0
        Length = 776

 Score = 156 (60.0 bits), Expect = 3.7e-10, P = 3.7e-10
 Identities = 43/163 (26%), Positives = 82/163 (50%)

Query:    17 DILISTPXXXXXXXXXX-XXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
             D+LI+TP               S++E L+LDEAD++ +     + +  +++ C+      
Sbjct:   324 DVLIATPGRLIDHLHNTPSFELSQIEILILDEADRMLDE-YFEEQMKEIIRMCAYQRQTM 382

Query:    76 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLV-FAGSEEGKLLALRQSF- 133
              LFSAT+ + V++LA   +   VR+ V      +  ++Q+ V    ++EG   A+  +  
Sbjct:   383 -LFSATMSEEVKDLASVSLKQPVRIFVNSNTDVAPYLRQEFVRIRPNKEGDREAIVAALL 441

Query:   134 AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
               +    V++F Q+K +A  ++  L    ++ G +H +LSQTQ
Sbjct:   442 TRTFQDHVMLFTQTKKQAHRMHILLGLMGLKVGELHGNLSQTQ 484


>ZFIN|ZDB-GENE-030131-18 [details] [associations]
            symbol:si:dkey-156n14.5 "si:dkey-156n14.5"
            species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 ZFIN:ZDB-GENE-030131-18 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
            KO:K13178 EMBL:CR626864 IPI:IPI00896916 RefSeq:XP_001923830.1
            UniGene:Dr.75535 Ensembl:ENSDART00000129202 GeneID:556764
            KEGG:dre:556764 NextBio:20881652 ArrayExpress:F1QBS1 Bgee:F1QBS1
            Uniprot:F1QBS1
        Length = 671

 Score = 155 (59.6 bits), Expect = 3.8e-10, P = 3.8e-10
 Identities = 49/170 (28%), Positives = 77/170 (45%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             DL +   +I I+TP               R  YLVLDEAD++ ++G     I  +V    
Sbjct:   214 DLER-GVEICIATPGRLIDFLEVGKTNLRRCTYLVLDEADRMLDMG-FEPQIRKIVDQI- 270

Query:    70 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQ--KLVFAGSEEGKL 126
              P     ++SAT P  V +LA   + D V++ +G    +A+ +I Q   +     ++ KL
Sbjct:   271 RPDRQTLMWSATWPKEVRQLAEDFLQDYVQINIGALELSANHNILQIVDVCMENEKDNKL 330

Query:   127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             + L +          +IFV++K R  EL   +  D   A  IH D SQ +
Sbjct:   331 IQLMEEIMAEKENKTIIFVETKKRCDELTRRMRRDGWPAMCIHGDKSQPE 380


>UNIPROTKB|I3LQ10 [details] [associations]
            symbol:LOC100626268 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00550000074997 Ensembl:ENSSSCT00000028964 OMA:RYLVALC
            Uniprot:I3LQ10
        Length = 684

 Score = 155 (59.6 bits), Expect = 3.9e-10, P = 3.9e-10
 Identities = 45/163 (27%), Positives = 81/163 (49%)

Query:    17 DILISTPXXXXXXXXXX-XXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
             DILI+TP               S +E L+LDEAD++ +     + +  +++ CS      
Sbjct:   339 DILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDE-YFEEQMKEIIRMCSLHRQTM 397

Query:    76 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLV-FAGSEEGKLLALRQSFA 134
              LFSAT+ D V++LA   + + VR+ V      +  ++Q+ +    + EG   A+  +  
Sbjct:   398 -LFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVAALL 456

Query:   135 -ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
               +    V++F Q+K +A  ++  L    ++ G +H +LSQTQ
Sbjct:   457 MRTFTDHVMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQ 499


>GENEDB_PFALCIPARUM|PF08_0096 [details] [associations]
            symbol:PF08_0096 "RNA helicase, putative"
            species:5833 "Plasmodium falciparum" [GO:0003724 "RNA helicase
            activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 KO:K11594
            HSSP:P10081 EMBL:AL844507 RefSeq:XP_001349420.1
            ProteinModelPortal:Q8IAU1 IntAct:Q8IAU1 MINT:MINT-1660402
            EnsemblProtists:PF08_0096:mRNA GeneID:2655295 KEGG:pfa:PF08_0096
            EuPathDB:PlasmoDB:PF3D7_0810600 HOGENOM:HOG000280970 OMA:NNPFNNN
            ProtClustDB:CLSZ2432713 Uniprot:Q8IAU1
        Length = 941

 Score = 122 (48.0 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
 Identities = 38/113 (33%), Positives = 58/113 (51%)

Query:    66 KACSNPSIVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEE 123
             K C N  I R   +FSAT    ++ LA+  +     ++VG+  + +E IKQ LVF   EE
Sbjct:   573 KYC-NDIIKRQTIMFSATFRKEIQVLAKEYLCKYTFLLVGKVGSTNEYIKQNLVFV-EEE 630

Query:   124 GKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
              K   L    AE+ N   ++FV++K +A  +   L+   + A  IH D SQ +
Sbjct:   631 NKCNYLLNLLAENNNGLTILFVETKRKADIIERFLSNQKLNAVCIHGDKSQDE 683

 Score = 60 (26.2 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query:     9 TDLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVG 55
             ++L K   DI+++TP                  +LVLDEAD++ ++G
Sbjct:   496 SNLDK-GADIIVATPGRLNDILEKGKIKLFLTTFLVLDEADRMLDMG 541


>UNIPROTKB|Q8IAU1 [details] [associations]
            symbol:PF08_0096 "RNA helicase, putative" species:36329
            "Plasmodium falciparum 3D7" [GO:0003724 "RNA helicase activity"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 KO:K11594
            HSSP:P10081 EMBL:AL844507 RefSeq:XP_001349420.1
            ProteinModelPortal:Q8IAU1 IntAct:Q8IAU1 MINT:MINT-1660402
            EnsemblProtists:PF08_0096:mRNA GeneID:2655295 KEGG:pfa:PF08_0096
            EuPathDB:PlasmoDB:PF3D7_0810600 HOGENOM:HOG000280970 OMA:NNPFNNN
            ProtClustDB:CLSZ2432713 Uniprot:Q8IAU1
        Length = 941

 Score = 122 (48.0 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
 Identities = 38/113 (33%), Positives = 58/113 (51%)

Query:    66 KACSNPSIVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEE 123
             K C N  I R   +FSAT    ++ LA+  +     ++VG+  + +E IKQ LVF   EE
Sbjct:   573 KYC-NDIIKRQTIMFSATFRKEIQVLAKEYLCKYTFLLVGKVGSTNEYIKQNLVFV-EEE 630

Query:   124 GKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
              K   L    AE+ N   ++FV++K +A  +   L+   + A  IH D SQ +
Sbjct:   631 NKCNYLLNLLAENNNGLTILFVETKRKADIIERFLSNQKLNAVCIHGDKSQDE 683

 Score = 60 (26.2 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query:     9 TDLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVG 55
             ++L K   DI+++TP                  +LVLDEAD++ ++G
Sbjct:   496 SNLDK-GADIIVATPGRLNDILEKGKIKLFLTTFLVLDEADRMLDMG 541


>UNIPROTKB|E1C2R8 [details] [associations]
            symbol:DDX17 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0009791 "post-embryonic
            development" evidence=IEA] [GO:0072358 "cardiovascular system
            development" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
            OMA:QQFPQPP EMBL:AADN02006148 EMBL:AADN02006147 IPI:IPI00594176
            Ensembl:ENSGALT00000020002 Uniprot:E1C2R8
        Length = 496

 Score = 152 (58.6 bits), Expect = 5.0e-10, P = 5.0e-10
 Identities = 52/170 (30%), Positives = 79/170 (46%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             DL +   +I I+TP               R  YLVLDEAD++ ++G     I  +V    
Sbjct:   209 DLER-GVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMG-FEPQIRKIVDQI- 265

Query:    70 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQKL-VFAGSEEG-KL 126
              P     ++SAT P  V +LA   + D V++ VG    +A+ +I Q + V   SE+  KL
Sbjct:   266 RPDRQTLMWSATWPKEVRQLAEDFLQDYVQINVGNLELSANHNILQIVDVCMESEKDHKL 325

Query:   127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             + L +          +IFV++K R  +L   +  D   A  IH D SQ +
Sbjct:   326 IQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPE 375


>UNIPROTKB|Q8EHT1 [details] [associations]
            symbol:SO_1136 "ATP-dependent RNA helicase DEAD box family"
            species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
            RefSeq:NP_716761.1 ProteinModelPortal:Q8EHT1 GeneID:1168967
            KEGG:son:SO_1136 PATRIC:23521912 OMA:IGAKENA ProtClustDB:CLSK869861
            Uniprot:Q8EHT1
        Length = 447

 Score = 151 (58.2 bits), Expect = 5.3e-10, P = 5.3e-10
 Identities = 48/170 (28%), Positives = 85/170 (50%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             DLS     ++++TP                +++LVLDEAD+L E+G     +  ++    
Sbjct:   145 DLSA-KPQLVVATPGRLLDLCTQSHISLDAIKHLVLDEADRLLEMG-FWPDMQKLMAMM- 201

Query:    70 NPSIVRSL-FSATLPDFVEELARSIM-HDAVRVIVGRKNTASESIKQKL--VFAGSEEGK 125
              P   ++L FSATLP+ ++ LA  ++ +D ++V    +N     I+++L  V  GS+   
Sbjct:   202 -PKRKQTLLFSATLPEALDSLAGKLLTNDPLKVEASTRNAVVGEIEEQLYLVNKGSKAQA 260

Query:   126 LLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
             L+AL + +     P VL+F+ ++D A  +   L    I A  +H +  QT
Sbjct:   261 LIALLKQYQW---PQVLVFISARDDADAIAKRLVKAGINAAALHGEKDQT 307


>TIGR_CMR|SO_1136 [details] [associations]
            symbol:SO_1136 "ATP-dependent RNA helicase, DEAD box
            family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
            RefSeq:NP_716761.1 ProteinModelPortal:Q8EHT1 GeneID:1168967
            KEGG:son:SO_1136 PATRIC:23521912 OMA:IGAKENA ProtClustDB:CLSK869861
            Uniprot:Q8EHT1
        Length = 447

 Score = 151 (58.2 bits), Expect = 5.3e-10, P = 5.3e-10
 Identities = 48/170 (28%), Positives = 85/170 (50%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             DLS     ++++TP                +++LVLDEAD+L E+G     +  ++    
Sbjct:   145 DLSA-KPQLVVATPGRLLDLCTQSHISLDAIKHLVLDEADRLLEMG-FWPDMQKLMAMM- 201

Query:    70 NPSIVRSL-FSATLPDFVEELARSIM-HDAVRVIVGRKNTASESIKQKL--VFAGSEEGK 125
              P   ++L FSATLP+ ++ LA  ++ +D ++V    +N     I+++L  V  GS+   
Sbjct:   202 -PKRKQTLLFSATLPEALDSLAGKLLTNDPLKVEASTRNAVVGEIEEQLYLVNKGSKAQA 260

Query:   126 LLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
             L+AL + +     P VL+F+ ++D A  +   L    I A  +H +  QT
Sbjct:   261 LIALLKQYQW---PQVLVFISARDDADAIAKRLVKAGINAAALHGEKDQT 307


>WB|WBGene00019245 [details] [associations]
            symbol:sacy-1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
            [GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
            "reproduction" evidence=IMP] [GO:0040010 "positive regulation of
            growth rate" evidence=IMP] [GO:0002009 "morphogenesis of an
            epithelium" evidence=IMP] [GO:0008340 "determination of adult
            lifespan" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
            development" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IDA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0005737
            GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0008270
            GO:GO:0003676 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00620000087942 HSSP:P10081 KO:K13116
            OMA:KDQEERS HOGENOM:HOG000268792 EMBL:FO081567 RefSeq:NP_491962.1
            ProteinModelPortal:Q9N5K1 SMR:Q9N5K1 PaxDb:Q9N5K1
            EnsemblMetazoa:H27M09.1 GeneID:172413 KEGG:cel:CELE_H27M09.1
            UCSC:H27M09.1 CTD:172413 WormBase:H27M09.1 InParanoid:Q9N5K1
            NextBio:875413 Uniprot:Q9N5K1
        Length = 630

 Score = 153 (58.9 bits), Expect = 5.7e-10, P = 5.7e-10
 Identities = 48/160 (30%), Positives = 78/160 (48%)

Query:    18 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVR 75
             I+++TP                  YLVLDEAD++ ++G  + +K I    KA    ++  
Sbjct:   325 IVVATPGRLSDMLTKKIINLEVCRYLVLDEADRMLDMGFEDEIKSIFYFFKA-QRQTL-- 381

Query:    76 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 135
              LFSAT+P  ++  A+S +   + V VGR   AS ++ Q+L F  SE  KL+ + +   +
Sbjct:   382 -LFSATMPRKIQFFAKSALVKPIVVNVGRAGAASLNVLQELEFVRSEN-KLVRVLECLQK 439

Query:   136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
             + +P VLIF + K     +Y  L    +    IH    Q+
Sbjct:   440 T-SPKVLIFAEKKVDVDNIYEYLLVKGVEVASIHGGKDQS 478


>CGD|CAL0000067 [details] [associations]
            symbol:DBP5 species:5476 "Candida albicans" [GO:0003724 "RNA
            helicase activity" evidence=IEA] [GO:0000822 "inositol
            hexakisphosphate binding" evidence=IEA] [GO:0008186 "RNA-dependent
            ATPase activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            [GO:0005934 "cellular bud tip" evidence=IEA] [GO:0044614 "nuclear
            pore cytoplasmic filaments" evidence=IEA] [GO:0005844 "polysome"
            evidence=IEA] [GO:0006406 "mRNA export from nucleus" evidence=IEA]
            [GO:0006415 "translational termination" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 CGD:CAL0000067 GO:GO:0005524 GO:GO:0005737
            GO:GO:0015031 GO:GO:0031965 GO:GO:0005643 GO:GO:0003723
            EMBL:AACQ01000014 EMBL:AACQ01000013 GO:GO:0051028
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            RefSeq:XP_721619.1 RefSeq:XP_721738.1 ProteinModelPortal:Q5AJD0
            PRIDE:Q5AJD0 GeneID:3636564 GeneID:3636693 KEGG:cal:CaO19.1661
            KEGG:cal:CaO19.9230 Uniprot:Q5AJD0
        Length = 540

 Score = 152 (58.6 bits), Expect = 5.8e-10, P = 5.8e-10
 Identities = 46/164 (28%), Positives = 72/164 (43%)

Query:    12 SKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP 71
             S  +  +L+ TP              S+++  VLDEAD + E   L      V KA    
Sbjct:   263 SSVNAQVLVGTPGIAIDLIRRRQLNLSKMKVFVLDEADNMLEAQGLGDQAIRVKKALPR- 321

Query:    72 SIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
              +   LFSAT P  V E A  ++ DA  + + ++    + IKQ  +   SE+ K   L +
Sbjct:   322 GVQLVLFSATFPTEVREYAERLVPDANSLELKQEELNVDGIKQLYMDCRSEQHKFEVLCE 381

Query:   132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
              +        +IFV+ K+ A  LYG++  +     V+H  L  T
Sbjct:   382 LYGLLTIGSSIIFVEKKETADVLYGKMKKEGHTVSVLHGGLDNT 425


>UNIPROTKB|Q8EBV7 [details] [associations]
            symbol:SO_3388 "ATP-dependent RNA helicase DEAD box family"
            species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
            RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
            KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
            Uniprot:Q8EBV7
        Length = 409

 Score = 150 (57.9 bits), Expect = 5.8e-10, P = 5.8e-10
 Identities = 47/160 (29%), Positives = 80/160 (50%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
             D+LI+TP              +++  LV DEAD++ ++G  +  I  V+K    P+  ++
Sbjct:   127 DVLIATPGRLLDHLRQGALNLNQLNTLVFDEADRMLDMG-FMDEIQAVLKQV--PAQRQT 183

Query:    77 L-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 135
             L FSATL D +   +++++ D  R+ V + NT +  I+Q+ V+A   + K   +      
Sbjct:   184 LLFSATLDDSIFSFSKNLLRDPKRIEVAKPNTTAAQIEQR-VYAIDSDRKTEFVSH-LVR 241

Query:   136 SLN-PPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
             S N   VLIF ++K    +L  +L    +     H DLSQ
Sbjct:   242 SKNWQQVLIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQ 281


>TIGR_CMR|SO_3388 [details] [associations]
            symbol:SO_3388 "ATP-dependent RNA helicase, DEAD box
            family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
            RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
            KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
            Uniprot:Q8EBV7
        Length = 409

 Score = 150 (57.9 bits), Expect = 5.8e-10, P = 5.8e-10
 Identities = 47/160 (29%), Positives = 80/160 (50%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
             D+LI+TP              +++  LV DEAD++ ++G  +  I  V+K    P+  ++
Sbjct:   127 DVLIATPGRLLDHLRQGALNLNQLNTLVFDEADRMLDMG-FMDEIQAVLKQV--PAQRQT 183

Query:    77 L-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 135
             L FSATL D +   +++++ D  R+ V + NT +  I+Q+ V+A   + K   +      
Sbjct:   184 LLFSATLDDSIFSFSKNLLRDPKRIEVAKPNTTAAQIEQR-VYAIDSDRKTEFVSH-LVR 241

Query:   136 SLN-PPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
             S N   VLIF ++K    +L  +L    +     H DLSQ
Sbjct:   242 SKNWQQVLIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQ 281


>POMBASE|SPBP8B7.16c [details] [associations]
            symbol:dbp2 "ATP-dependent RNA helicase Dbp2"
            species:4896 "Schizosaccharomyces pombe" [GO:0000184
            "nuclear-transcribed mRNA catabolic process, nonsense-mediated
            decay" evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
            [GO:0005524 "ATP binding" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
            "cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
            [GO:0006364 "rRNA processing" evidence=ISO] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBP8B7.16c
            GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 GO:GO:0000184
            EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY OrthoDB:EOG47SWP6
            EMBL:X52648 EMBL:L11574 PIR:T40810 RefSeq:NP_596523.1
            ProteinModelPortal:P24782 IntAct:P24782 STRING:P24782 PRIDE:P24782
            EnsemblFungi:SPBP8B7.16c.1 GeneID:2541383 KEGG:spo:SPBP8B7.16c
            NextBio:20802492 Uniprot:P24782
        Length = 550

 Score = 152 (58.6 bits), Expect = 5.9e-10, P = 5.9e-10
 Identities = 54/164 (32%), Positives = 76/164 (46%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
             +I I+TP               RV YLVLDEAD++ ++G     I  +V     P     
Sbjct:   247 EICIATPGRLLDMLDSNKTNLRRVTYLVLDEADRMLDMG-FEPQIRKIVDQI-RPDRQTV 304

Query:    77 LFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQKLVFAGSEEGKLLALRQSFAE 135
             +FSAT P  V+ LAR  ++D ++V VG  +  AS +IKQ +V       K   L +   E
Sbjct:   305 MFSATWPKEVQRLARDYLNDYIQVTVGSLDLAASHNIKQ-IVEVVDNADKRARLGKDIEE 363

Query:   136 SLNP---PVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
              L      VLIF  +K  A ++   L  D   A  IH D +Q +
Sbjct:   364 VLKDRDNKVLIFTGTKRVADDITRFLRQDGWPALAIHGDKAQDE 407


>TAIR|locus:2076436 [details] [associations]
            symbol:AT3G58570 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            EMBL:AL137082 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 KO:K11594 OMA:KYERGGN EMBL:AY049285
            EMBL:BT002731 EMBL:AY088132 IPI:IPI00518094 PIR:T45677
            RefSeq:NP_191416.1 UniGene:At.831 ProteinModelPortal:Q9M2F9
            SMR:Q9M2F9 STRING:Q9M2F9 PaxDb:Q9M2F9 PRIDE:Q9M2F9
            EnsemblPlants:AT3G58570.1 GeneID:825026 KEGG:ath:AT3G58570
            GeneFarm:1031 TAIR:At3g58570 InParanoid:Q9M2F9 PhylomeDB:Q9M2F9
            ProtClustDB:CLSN2915471 Genevestigator:Q9M2F9 GermOnline:AT3G58570
            Uniprot:Q9M2F9
        Length = 646

 Score = 153 (58.9 bits), Expect = 5.9e-10, P = 5.9e-10
 Identities = 49/169 (28%), Positives = 80/169 (47%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI-VR 75
             DIL++TP                V +L LDEAD++ ++G     I  +V+    P   VR
Sbjct:   276 DILVATPGRLNDLLERGRVSLQMVRFLALDEADRMLDMG-FEPQIRKIVQQMDMPPPGVR 334

Query:    76 S--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK-----LL- 127
                LFSAT P  ++ LA   + + + + VGR  ++++ I Q++ F    + +     LL 
Sbjct:   335 QTMLFSATFPREIQRLASDFLSNYIFLAVGRVGSSTDLIVQRVEFVHDSDKRSHLMDLLH 394

Query:   128 ALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             A R++  +      L+FV++K  A  L   L  +   A  IH D SQ +
Sbjct:   395 AQRENGNQGKQALTLVFVETKKGADSLENWLCINGFPATTIHGDRSQQE 443


>UNIPROTKB|Q9NXZ2 [details] [associations]
            symbol:DDX43 "Probable ATP-dependent RNA helicase DDX43"
            species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004004 "ATP-dependent
            RNA helicase activity" evidence=TAS] [GO:0005622 "intracellular"
            evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
            Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
            GO:GO:0005524 GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
            HOVERGEN:HBG015893 EMBL:AJ278110 EMBL:AL136751 EMBL:BC066938
            IPI:IPI00032899 RefSeq:NP_061135.2 UniGene:Hs.125507
            ProteinModelPortal:Q9NXZ2 SMR:Q9NXZ2 STRING:Q9NXZ2
            PhosphoSite:Q9NXZ2 DMDM:145559466 PRIDE:Q9NXZ2 DNASU:55510
            Ensembl:ENST00000370336 GeneID:55510 KEGG:hsa:55510 UCSC:uc003pgw.3
            CTD:55510 GeneCards:GC06P074161 HGNC:HGNC:18677 HPA:HPA031380
            HPA:HPA031381 MIM:606286 neXtProt:NX_Q9NXZ2 PharmGKB:PA134988734
            InParanoid:Q9NXZ2 OMA:VLDITHV OrthoDB:EOG43BMNQ PhylomeDB:Q9NXZ2
            ChiTaRS:DDX43 GenomeRNAi:55510 NextBio:59918 ArrayExpress:Q9NXZ2
            Bgee:Q9NXZ2 CleanEx:HS_DDX43 Genevestigator:Q9NXZ2
            GermOnline:ENSG00000080007 Uniprot:Q9NXZ2
        Length = 648

 Score = 153 (58.9 bits), Expect = 6.0e-10, P = 6.0e-10
 Identities = 51/168 (30%), Positives = 81/168 (48%)

Query:    13 KFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDP-VVKACSN- 70
             K   DI+I+TP                + YLVLDEADK+ ++G      +P ++K   + 
Sbjct:   363 KKGVDIIIATPGRLNDLQMSNFVNLKNITYLVLDEADKMLDMG-----FEPQIMKILLDV 417

Query:    71 -PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQKLVFAGSEEGKLLA 128
              P     + SAT P  V  LA+S + + + V VG  +  A  S+KQ ++   +EE K   
Sbjct:   418 RPDRQTVMTSATWPHSVHRLAQSYLKEPMIVYVGTLDLVAVSSVKQNIIVT-TEEEKWSH 476

Query:   129 LRQSFAESLNPP--VLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
             + Q+F +S++    V++FV  K  A  L  +L   +I    +H D  Q
Sbjct:   477 M-QTFLQSMSSTDKVIVFVSRKAVADHLSSDLILGNISVESLHGDREQ 523


>CGD|CAL0003204 [details] [associations]
            symbol:DBP2 species:5476 "Candida albicans" [GO:0005730
            "nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            [GO:0005739 "mitochondrion" evidence=IEA] [GO:0000184
            "nuclear-transcribed mRNA catabolic process, nonsense-mediated
            decay" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 CGD:CAL0003204 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000245
            EMBL:AACQ01000246 RefSeq:XP_710694.1 RefSeq:XP_710708.1
            ProteinModelPortal:Q59LU0 PRIDE:Q59LU0 GeneID:3647692
            GeneID:3647705 KEGG:cal:CaO19.171 KEGG:cal:CaO19.7804 KO:K12823
            Uniprot:Q59LU0
        Length = 562

 Score = 152 (58.6 bits), Expect = 6.1e-10, P = 6.1e-10
 Identities = 48/170 (28%), Positives = 80/170 (47%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             DL++   +I I+TP               RV YLVLDEAD++ ++G     I  +V    
Sbjct:   246 DLAR-GVEICIATPGRLIDMLEAGKTNLKRVTYLVLDEADRMLDMG-FEPQIRKIVDQI- 302

Query:    70 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQ--KLVFAGSEEGKL 126
              P     ++SAT P  V++L R  ++D ++V +G     AS +I Q  +++   S+  +L
Sbjct:   303 RPDRQTLMWSATWPKEVQQLTRDYLNDPIQVTIGSLELAASHTITQLVEVIDEFSKRDRL 362

Query:   127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             +   +S     +  +L+F  +K    E+   L  D   A  IH D  Q +
Sbjct:   363 VKHLESALNEKDNKILVFASTKRTCDEITTYLRSDGWPALAIHGDKEQNE 412


>TAIR|locus:2176192 [details] [associations]
            symbol:AT5G51280 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
            "zinc ion binding" evidence=IEA] [GO:0000741 "karyogamy"
            evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
            evidence=RCA] InterPro:IPR001650 InterPro:IPR001878
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
            GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
            GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 EMBL:AB023044 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K13116
            OMA:DICRYLC HOGENOM:HOG000268792 EMBL:AK226380 IPI:IPI00530020
            RefSeq:NP_199941.1 UniGene:At.29686 ProteinModelPortal:Q9LU46
            SMR:Q9LU46 PaxDb:Q9LU46 PRIDE:Q9LU46 DNASU:835202
            EnsemblPlants:AT5G51280.1 GeneID:835202 KEGG:ath:AT5G51280
            GeneFarm:1011 TAIR:At5g51280 InParanoid:Q9LU46 PhylomeDB:Q9LU46
            ProtClustDB:CLSN2685494 Genevestigator:Q9LU46 GermOnline:AT5G51280
            Uniprot:Q9LU46
        Length = 591

 Score = 152 (58.6 bits), Expect = 6.6e-10, P = 6.6e-10
 Identities = 46/167 (27%), Positives = 79/167 (47%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             ++ K    I+++TP                  YL LDEAD+L ++G      D + +   
Sbjct:   273 EVVKRGVHIVVATPGRLKDMLAKKKMSLDACRYLTLDEADRLVDLG----FEDDIREVFD 328

Query:    70 NPSIVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLL 127
             +    R   LFSAT+P  ++  ARS +   V V VGR   A+  + Q++ +   +E K++
Sbjct:   329 HFKSQRQTLLFSATMPTKIQIFARSALVKPVTVNVGRAGAANLDVIQEVEYV-KQEAKIV 387

Query:   128 ALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
              L +   ++ +PPVLIF ++K    +++  L    + A  IH    Q
Sbjct:   388 YLLECLQKT-SPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQ 433


>TIGR_CMR|GSU_0491 [details] [associations]
            symbol:GSU_0491 "ATP-dependent RNA helicase RhlE"
            species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008152
            "metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
            RefSeq:NP_951550.1 ProteinModelPortal:Q74FW1 GeneID:2686040
            KEGG:gsu:GSU0491 PATRIC:22023733 OMA:TTHEHIE ProtClustDB:CLSK827872
            BioCyc:GSUL243231:GH27-490-MONOMER Uniprot:Q74FW1
        Length = 450

 Score = 150 (57.9 bits), Expect = 6.9e-10, P = 6.9e-10
 Identities = 44/159 (27%), Positives = 75/159 (47%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
             D +++TP              SR+E LVLDEAD++ ++G     +D +  A ++P+  ++
Sbjct:   125 DFIVATPGRLVDLLDRRSLDLSRLELLVLDEADRMLDMG-FSDDVDRI--AAASPATRQT 181

Query:    77 L-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 135
             L F+AT+   +  LA  ++ +  R+ +    T  E I+Q+L  A     K   LR    +
Sbjct:   182 LLFTATMDSAMARLAGRLLREPERIDIAGTKTTHEHIEQRLHVADDLHHKNRLLRHLITD 241

Query:   136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
                   +IF  +K  A+ L  EL      A  +H D+ Q
Sbjct:   242 ESLRRAIIFSATKRDAENLALELKAQGHSAAALHGDMPQ 280


>UNIPROTKB|Q9KMW4 [details] [associations]
            symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
            species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            [GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
            RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
            GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
            ProtClustDB:CLSK869561 Uniprot:Q9KMW4
        Length = 451

 Score = 150 (57.9 bits), Expect = 7.0e-10, P = 7.0e-10
 Identities = 43/158 (27%), Positives = 77/158 (48%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
             DIL++TP               ++E LVLDEAD++ ++G  ++ I  ++K          
Sbjct:   125 DILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMG-FIRDIHKILKLLPEKR-QNL 182

Query:    77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
             LFSAT    + ELA+ ++++ V + V   N+ + +++Q  ++    + K   L +   E 
Sbjct:   183 LFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQ-CIYPADVKKKPDMLVKLVKEG 241

Query:   137 LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
                 VL+F+++K  A  L   L    + A  IH + SQ
Sbjct:   242 NWQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQ 279


>TIGR_CMR|VC_A0204 [details] [associations]
            symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
            species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008152
            "metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
            RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
            GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
            ProtClustDB:CLSK869561 Uniprot:Q9KMW4
        Length = 451

 Score = 150 (57.9 bits), Expect = 7.0e-10, P = 7.0e-10
 Identities = 43/158 (27%), Positives = 77/158 (48%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
             DIL++TP               ++E LVLDEAD++ ++G  ++ I  ++K          
Sbjct:   125 DILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMG-FIRDIHKILKLLPEKR-QNL 182

Query:    77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
             LFSAT    + ELA+ ++++ V + V   N+ + +++Q  ++    + K   L +   E 
Sbjct:   183 LFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQ-CIYPADVKKKPDMLVKLVKEG 241

Query:   137 LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
                 VL+F+++K  A  L   L    + A  IH + SQ
Sbjct:   242 NWQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQ 279


>UNIPROTKB|B4E132 [details] [associations]
            symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
            sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
            HOGENOM:HOG000268804 HOVERGEN:HBG015893 UniGene:Hs.99120
            HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK303638 IPI:IPI00908506
            ProteinModelPortal:B4E132 SMR:B4E132 STRING:B4E132
            Ensembl:ENST00000420730 Uniprot:B4E132
        Length = 407

 Score = 149 (57.5 bits), Expect = 7.4e-10, P = 7.4e-10
 Identities = 45/137 (32%), Positives = 71/137 (51%)

Query:    41 EYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI-VRS--LFSATLPDFVEELARSIMHDA 97
             +YLVLDEAD++ ++G     I  +V+  + P   VR   +FSAT P  ++ LAR  + + 
Sbjct:    87 KYLVLDEADRMLDMG-FEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEY 145

Query:    98 VRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGE 157
             + + VGR  + SE+I QK+V+    + +   L    A   +   L+FV++K  A  L   
Sbjct:   146 IFLAVGRVGSTSENITQKVVWVEDLDKRSFLLDILGATGSDSLTLVFVETKKGADSLEDF 205

Query:   158 LAFDDIRAGVIHSDLSQ 174
             L  +      IH D SQ
Sbjct:   206 LYHEGYACTSIHGDRSQ 222


>UNIPROTKB|F1NQV5 [details] [associations]
            symbol:DDX27 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00550000074997 EMBL:AADN02019007 IPI:IPI00579774
            Ensembl:ENSGALT00000039062 ArrayExpress:F1NQV5 Uniprot:F1NQV5
        Length = 758

 Score = 153 (58.9 bits), Expect = 7.5e-10, P = 7.5e-10
 Identities = 45/163 (27%), Positives = 79/163 (48%)

Query:    17 DILISTPXXXXXXXXXX-XXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
             DILI+TP               S VE L+LDEAD++ +     + +  +++ CS      
Sbjct:   303 DILIATPGRLIDHLHNCPSFHLSSVEVLILDEADRMLDE-YFEEQMKEIIRLCSRHRQTM 361

Query:    76 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLV-FAGSEEGKLLALRQSFA 134
              LFSAT+ + V++LA   + +  R+ V      +  ++Q+ +    + EG   A+  +  
Sbjct:   362 -LFSATMTEEVKDLASVSLKNPTRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVSALL 420

Query:   135 ESLNPP-VLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
                 P  V++F Q+K +A  ++  L    +R G +H +LSQ Q
Sbjct:   421 TRTFPDHVMLFTQTKKQAHRMHILLGLMGLRVGELHGNLSQAQ 463


>UNIPROTKB|E1C187 [details] [associations]
            symbol:DDX27 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00550000074997 OMA:TRTFTDH EMBL:AADN02019007
            IPI:IPI00822640 Ensembl:ENSGALT00000011297 ArrayExpress:E1C187
            Uniprot:E1C187
        Length = 759

 Score = 153 (58.9 bits), Expect = 7.5e-10, P = 7.5e-10
 Identities = 45/163 (27%), Positives = 79/163 (48%)

Query:    17 DILISTPXXXXXXXXXX-XXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
             DILI+TP               S VE L+LDEAD++ +     + +  +++ CS      
Sbjct:   304 DILIATPGRLIDHLHNCPSFHLSSVEVLILDEADRMLDE-YFEEQMKEIIRLCSRHRQTM 362

Query:    76 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLV-FAGSEEGKLLALRQSFA 134
              LFSAT+ + V++LA   + +  R+ V      +  ++Q+ +    + EG   A+  +  
Sbjct:   363 -LFSATMTEEVKDLASVSLKNPTRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVSALL 421

Query:   135 ESLNPP-VLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
                 P  V++F Q+K +A  ++  L    +R G +H +LSQ Q
Sbjct:   422 TRTFPDHVMLFTQTKKQAHRMHILLGLMGLRVGELHGNLSQAQ 464


>FB|FBgn0037549 [details] [associations]
            symbol:CG7878 species:7227 "Drosophila melanogaster"
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
            [GO:0004386 "helicase activity" evidence=ISS] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
            InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
            SMART:SM00322 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
            GO:GO:0006200 GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
            HSSP:P10081 OMA:VLDITHV EMBL:AY051831 RefSeq:NP_649767.1
            UniGene:Dm.1098 SMR:Q7K4L8 IntAct:Q7K4L8 EnsemblMetazoa:FBtr0113205
            GeneID:40959 KEGG:dme:Dmel_CG7878 UCSC:CG7878-RA
            FlyBase:FBgn0037549 InParanoid:Q7K4L8 OrthoDB:EOG47D7XG
            GenomeRNAi:40959 NextBio:20818674 Uniprot:Q7K4L8
        Length = 703

 Score = 152 (58.6 bits), Expect = 8.6e-10, P = 8.6e-10
 Identities = 50/169 (29%), Positives = 79/169 (46%)

Query:     9 TDLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKAC 68
             +DL +   +I+I TP              S + YLVLDEAD++ ++G     I  V+   
Sbjct:   401 SDLER-GAEIIICTPGRLNDLIMANVIDVSTITYLVLDEADRMLDMG-FEPQIRKVMLDI 458

Query:    69 SNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQKLVFAGSEEGKLL 127
               P     + SAT P  V  LA+S M + ++V VG  +  A+ S+KQ +     +  K  
Sbjct:   459 -RPDRQTIMTSATWPPGVRRLAQSYMKNPIQVCVGSLDLAATHSVKQIIKLMEDDMDKFN 517

Query:   128 ALRQSFAESLNPP--VLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
              +  SF ++++    ++IF   K RA +L  EL  D      IH +  Q
Sbjct:   518 TIT-SFVKNMSSTDKIIIFCGRKVRADDLSSELTLDGFMTQCIHGNRDQ 565


>TIGR_CMR|SO_4034 [details] [associations]
            symbol:SO_4034 "ATP-dependent RNA helicase DeaD"
            species:211586 "Shewanella oneidensis MR-1" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0009631 "cold
            acclimation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
            Pfam:PF03880 HSSP:P10081 OMA:LPQGMPK RefSeq:NP_719564.1
            ProteinModelPortal:Q8EA75 GeneID:1171660 KEGG:son:SO_4034
            PATRIC:23527732 ProtClustDB:CLSK907463 Uniprot:Q8EA75
        Length = 623

 Score = 151 (58.2 bits), Expect = 9.2e-10, P = 9.2e-10
 Identities = 39/157 (24%), Positives = 81/157 (51%)

Query:    18 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 77
             +++ TP                ++ LVLDEAD++ ++G  +  I+ +++  + P    +L
Sbjct:   127 VIVGTPGRVMDHMRRGTLKLETLQALVLDEADEMLKMG-FIDDIEWILEH-TPPQRQLAL 184

Query:    78 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESL 137
             FSAT+P+ ++ +A   + +A  + +   +T  +SI+Q+ V   S+  KL AL +      
Sbjct:   185 FSATMPEQIKRVANKHLKNATNISIAASHTTVDSIEQRFVQV-SQHNKLEALVRVLEVEN 243

Query:   138 NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
                ++IFV++++   EL  +L      +  +H D++Q
Sbjct:   244 TEGIIIFVRTRNSCVELAEKLEARGYASSPLHGDMNQ 280


>UNIPROTKB|F1S0I6 [details] [associations]
            symbol:DDX43 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
            InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
            SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
            GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 OMA:VLDITHV EMBL:CU468562
            EMBL:AEMK01095428 EMBL:AEMK01188208 EMBL:FP312832
            Ensembl:ENSSSCT00000004740 Uniprot:F1S0I6
        Length = 650

 Score = 151 (58.2 bits), Expect = 9.8e-10, P = 9.8e-10
 Identities = 52/171 (30%), Positives = 82/171 (47%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDP-VVKAC 68
             DL K   DI+I+TP                + YLVLDEADK+ ++G      +P ++K  
Sbjct:   363 DLLK-GVDIIIATPGRLNDLQMNNFVYLKSISYLVLDEADKMLDMG-----FEPQIMKIL 416

Query:    69 SN--PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQKLVFAGSEEGK 125
              +  P     + SAT P  V  LA+S + + + V VG  +  A  ++KQ ++    +E +
Sbjct:   417 LDIRPDRQTVMTSATWPYAVRRLAQSYLKEPMIVYVGTLDLVAVSTVKQNIIVTTEDEKR 476

Query:   126 LLALRQSFAESLNPP--VLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
               +  Q+F ES++P   V+IFV  K  A  L  +L    I    +H +  Q
Sbjct:   477 --SHIQTFIESMSPKDKVIIFVSRKAVADHLSSDLGIRHISVESLHGNREQ 525


>WB|WBGene00018776 [details] [associations]
            symbol:F53H1.1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0040010 "positive regulation of growth rate"
            evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002009
            "morphogenesis of an epithelium" evidence=IMP] [GO:0040035
            "hermaphrodite genitalia development" evidence=IMP] [GO:0009792
            "embryo development ending in birth or egg hatching" evidence=IMP]
            [GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
            [GO:0040018 "positive regulation of multicellular organism growth"
            evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
            "growth" evidence=IMP] [GO:0002119 "nematode larval development"
            evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
            GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
            GO:GO:0002119 GO:GO:0040011 GO:GO:0040018 GO:GO:0003676
            GO:GO:0040035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HSSP:P10081 GeneTree:ENSGT00610000086076 KO:K12811
            HOGENOM:HOG000007229 OMA:IEEENKF EMBL:FO081458
            RefSeq:NP_001033411.1 ProteinModelPortal:Q965K2 SMR:Q965K2
            PaxDb:Q965K2 PRIDE:Q965K2 EnsemblMetazoa:F53H1.1 GeneID:176943
            KEGG:cel:CELE_F53H1.1 UCSC:F53H1.1 CTD:176943 WormBase:F53H1.1
            InParanoid:Q965K2 NextBio:894678 ArrayExpress:Q965K2 Uniprot:Q965K2
        Length = 970

 Score = 153 (58.9 bits), Expect = 1.0e-09, P = 1.0e-09
 Identities = 47/157 (29%), Positives = 76/157 (48%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXS---RVEYLVLDEADKLFEVGNLLKHIDP-VV 65
             DL +   +I++ TP              +   RV YLVLDEAD++F+ G      +P ++
Sbjct:   423 DLKR-GAEIVVCTPGRMIDVLAANSGKVTNLRRVTYLVLDEADRMFDKG-----FEPQIM 476

Query:    66 KACSN--PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEE 123
             K  +N  P     LFSAT P  +E LAR ++   V ++VG K+     I Q  V     +
Sbjct:   477 KVVNNIRPDKQTVLFSATFPRHMEALARKVLDKPVEILVGGKSVVCSDITQNAVICAEHQ 536

Query:   124 G--KLLALRQSFAESLNPPVLIFVQSKDRAKELYGEL 158
                KLL L   + E  +   ++FV  +++A ++  +L
Sbjct:   537 KFLKLLELLGMYYEEGSS--IVFVDKQEKADDIVDQL 571


>UNIPROTKB|J3KT12 [details] [associations]
            symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1
            ProteinModelPortal:J3KT12 Ensembl:ENST00000582746 Uniprot:J3KT12
        Length = 341

 Score = 146 (56.5 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 41/159 (25%), Positives = 70/159 (44%)

Query:    18 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 77
             I++ TP                ++  VLDEAD++   G   +  D   K  SN  +V  L
Sbjct:   154 IIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVV--L 211

Query:    78 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESL 137
              SAT+P  V E+ +  M D +R++V ++    E I+Q  +    EE KL  L   +    
Sbjct:   212 LSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLT 271

Query:   138 NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
                 +IF+ ++ +   L  ++   D     +H D+ Q +
Sbjct:   272 ITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKE 310


>ZFIN|ZDB-GENE-080204-77 [details] [associations]
            symbol:ddx43 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
            43" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
            Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
            ZFIN:ZDB-GENE-080204-77 GO:GO:0005524 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
            GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 OrthoDB:EOG43BMNQ
            EMBL:BX890626 EMBL:CR354610 IPI:IPI00886666 UniGene:Dr.41756
            Ensembl:ENSDART00000101479 OMA:IDITSIT Uniprot:B8A609
        Length = 719

 Score = 151 (58.2 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 48/161 (29%), Positives = 74/161 (45%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
             DI+I+TP                + YLVLDEAD++ ++G     I  ++     P     
Sbjct:   403 DIVIATPGRLNDLQMNELINLRSITYLVLDEADRMLDMG-FEPQIMKIILDI-RPDRQTV 460

Query:    77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTAS-ESIKQKLVFAGSEEGKLLALRQSFAE 135
             + SAT P  V  LA+S + D + V VG  + A+  +++Q ++F   +E K       F  
Sbjct:   461 MTSATWPPGVRRLAKSYLKDPMMVYVGTLDLAAVNTVQQTVLFVQEDEKKDYVF--DFIH 518

Query:   136 SLNP--PVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
              + P   VLIFV  K +A +L  +L    I    +H D  Q
Sbjct:   519 RMEPLDKVLIFVGKKLKADDLSSDLCLQGIAVQSLHGDREQ 559


>FB|FBgn0001942 [details] [associations]
            symbol:eIF-4a "Eukaryotic initiation factor 4a" species:7227
            "Drosophila melanogaster" [GO:0003724 "RNA helicase activity"
            evidence=ISS] [GO:0006413 "translational initiation"
            evidence=ISS;NAS] [GO:0016281 "eukaryotic translation initiation
            factor 4F complex" evidence=ISS] [GO:0003743 "translation
            initiation factor activity" evidence=ISS;NAS] [GO:0005829 "cytosol"
            evidence=ISS;NAS] [GO:0017116 "single-stranded DNA-dependent
            ATP-dependent DNA helicase activity" evidence=NAS] [GO:0006268 "DNA
            unwinding involved in replication" evidence=NAS] [GO:0000339 "RNA
            cap binding" evidence=NAS] [GO:0003729 "mRNA binding" evidence=NAS]
            [GO:0007446 "imaginal disc growth" evidence=TAS] [GO:0002168
            "instar larval development" evidence=TAS] [GO:0009950
            "dorsal/ventral axis specification" evidence=IMP] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
            splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
            evidence=IC] [GO:0000022 "mitotic spindle elongation" evidence=IMP]
            [GO:0007052 "mitotic spindle organization" evidence=IMP]
            [GO:0005875 "microtubule associated complex" evidence=IDA]
            [GO:0007067 "mitosis" evidence=IMP] [GO:0006974 "response to DNA
            damage stimulus" evidence=IMP] [GO:0048132 "female germ-line stem
            cell division" evidence=IGI;IMP] [GO:0030718 "germ-line stem cell
            maintenance" evidence=IMP] [GO:0048477 "oogenesis" evidence=IGI]
            [GO:0072686 "mitotic spindle" evidence=IDA] [GO:0051297 "centrosome
            organization" evidence=IMP] [GO:0005813 "centrosome" evidence=IDA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005813 GO:GO:0005875 GO:GO:0007067 EMBL:AE014134
            GO:GO:0051297 GO:GO:0016281 GO:GO:0006974 GO:GO:0003743
            GO:GO:0030718 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0000022 GO:GO:0072686 GO:GO:0048132 GO:GO:0002168
            GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513 GO:GO:0003724
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0007446
            GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ EMBL:X69045
            EMBL:AF145621 EMBL:AY069283 EMBL:AY121623 PIR:S30278
            RefSeq:NP_001245907.1 RefSeq:NP_476595.1 RefSeq:NP_723137.1
            RefSeq:NP_723138.1 RefSeq:NP_723139.1 UniGene:Dm.7226
            ProteinModelPortal:Q02748 SMR:Q02748 DIP:DIP-18113N IntAct:Q02748
            MINT:MINT-892982 STRING:Q02748 PaxDb:Q02748 PRIDE:Q02748
            EnsemblMetazoa:FBtr0079175 EnsemblMetazoa:FBtr0079176
            EnsemblMetazoa:FBtr0079177 EnsemblMetazoa:FBtr0079178
            EnsemblMetazoa:FBtr0307068 EnsemblMetazoa:FBtr0331201 GeneID:33835
            KEGG:dme:Dmel_CG9075 CTD:33835 FlyBase:FBgn0001942
            InParanoid:Q02748 OrthoDB:EOG4B8GVF PhylomeDB:Q02748 ChiTaRS:eIF-4a
            GenomeRNAi:33835 NextBio:785508 Bgee:Q02748 GermOnline:CG9075
            Uniprot:Q02748
        Length = 403

 Score = 147 (56.8 bits), Expect = 1.2e-09, P = 1.2e-09
 Identities = 42/159 (26%), Positives = 68/159 (42%)

Query:    16 CDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
             C +++ TP                ++  VLDEAD++   G     I  V K    P +  
Sbjct:   149 CHVVVGTPGRVYDMINRKVLRTQYIKLFVLDEADEMLSRG-FKDQIQDVFKMLP-PDVQV 206

Query:    76 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 135
              L SAT+P  V E++R  M D V ++V ++    E IKQ  V    E  KL  L   +  
Sbjct:   207 ILLSATMPPDVLEVSRCFMRDPVSILVKKEELTLEGIKQFYVNVKQENWKLGTLCDLYDT 266

Query:   136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
                   +IF  ++ +  +L  E++  +     +H D+ Q
Sbjct:   267 LSITQSVIFCNTRRKVDQLTQEMSIHNFTVSAMHGDMEQ 305


>UNIPROTKB|Q11039 [details] [associations]
            symbol:deaD "Cold-shock DEAD box protein A homolog"
            species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
            evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005618
            GO:GO:0006355 EMBL:AE000516 GenomeReviews:AE000516_GR
            GenomeReviews:AL123456_GR EMBL:BX842576 GO:GO:0006351 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
            PIR:E70752 RefSeq:NP_215769.1 RefSeq:NP_335736.1
            RefSeq:YP_006514628.1 ProteinModelPortal:Q11039 SMR:Q11039
            PRIDE:Q11039 EnsemblBacteria:EBMYCT00000002426
            EnsemblBacteria:EBMYCT00000070115 GeneID:13319832 GeneID:887069
            GeneID:924778 KEGG:mtc:MT1292 KEGG:mtu:Rv1253 KEGG:mtv:RVBD_1253
            PATRIC:18124606 TubercuList:Rv1253 OMA:LPQGMPK
            ProtClustDB:CLSK791051 Uniprot:Q11039
        Length = 563

 Score = 149 (57.5 bits), Expect = 1.3e-09, P = 1.3e-09
 Identities = 44/161 (27%), Positives = 74/161 (45%)

Query:    18 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-PSIVR- 75
             +++ TP              SRV++LVLDEAD++  +G      D V +  S  P   + 
Sbjct:   135 VVVGTPGRMIDHLERATLDLSRVDFLVLDEADEMLTMG----FADDVERILSETPEYKQV 190

Query:    76 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 135
             +LFSAT+P  + +L+   +HD   V    K   +E+I Q  +       K+ AL +    
Sbjct:   191 ALFSATMPPAIRKLSAKYLHDPFEVTCKAKTAVAENISQSYIQVAR---KMDALTRVLEV 247

Query:   136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
                  +++FV++K   +E+  +L      A  I  D+ Q Q
Sbjct:   248 EPFEAMIVFVRTKQATEEIAEKLRARGFSAAAISGDVPQAQ 288


>TIGR_CMR|CPS_1418 [details] [associations]
            symbol:CPS_1418 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:FRNLCAI
            HOGENOM:HOG000268807 RefSeq:YP_268161.1 ProteinModelPortal:Q485V4
            GeneID:3523021 KEGG:cps:CPS_1418 PATRIC:21466051
            BioCyc:CPSY167879:GI48-1499-MONOMER Uniprot:Q485V4
        Length = 401

 Score = 146 (56.5 bits), Expect = 1.5e-09, P = 1.5e-09
 Identities = 45/159 (28%), Positives = 75/159 (47%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
             DIL++TP                ++ LVLDEAD++ ++G  +  I+ +++          
Sbjct:   130 DILVATPGRLLDMTHQRVLHFDELDMLVLDEADRMLDMG-FIDDINKIIERLPEHR-QNL 187

Query:    77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
             LFSAT+ + V  LA+  +H  V + +G    +   I+Q LV    ++    AL      +
Sbjct:   188 LFSATMSEEVRGLAKRTIHKPVEISIGADKASKPKIEQWLVTV--DKANKSALLSHIITT 245

Query:   137 LN-PPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
              N    LIF+++K  A +L  +L    I A  IHS  +Q
Sbjct:   246 QNWQQALIFIETKHGAAKLVSQLEKRGIVAESIHSGRAQ 284


>UNIPROTKB|Q3SZ54 [details] [associations]
            symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
            species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0003743 "translation initiation factor activity" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 EMBL:BC103130
            IPI:IPI00698793 RefSeq:NP_001029400.1 UniGene:Bt.14169
            ProteinModelPortal:Q3SZ54 SMR:Q3SZ54 STRING:Q3SZ54 PRIDE:Q3SZ54
            Ensembl:ENSBTAT00000000144 GeneID:504958 KEGG:bta:504958 CTD:1973
            InParanoid:Q3SZ54 KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1
            NextBio:20866906 Uniprot:Q3SZ54
        Length = 406

 Score = 146 (56.5 bits), Expect = 1.6e-09, P = 1.6e-09
 Identities = 41/159 (25%), Positives = 70/159 (44%)

Query:    18 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 77
             I++ TP                ++  VLDEAD++   G   +  D   K  SN  +V  L
Sbjct:   154 IIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVV--L 211

Query:    78 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESL 137
              SAT+P  V E+ +  M D +R++V ++    E I+Q  +    EE KL  L   +    
Sbjct:   212 LSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLT 271

Query:   138 NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
                 +IF+ ++ +   L  ++   D     +H D+ Q +
Sbjct:   272 ITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKE 310


>UNIPROTKB|F1P895 [details] [associations]
            symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00530000062880 OMA:PILEMED EMBL:AAEX03003619
            EMBL:AAEX03003621 EMBL:AAEX03003620 Ensembl:ENSCAFT00000026357
            Uniprot:F1P895
        Length = 406

 Score = 146 (56.5 bits), Expect = 1.6e-09, P = 1.6e-09
 Identities = 41/159 (25%), Positives = 70/159 (44%)

Query:    18 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 77
             I++ TP                ++  VLDEAD++   G   +  D   K  SN  +V  L
Sbjct:   154 IIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVV--L 211

Query:    78 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESL 137
              SAT+P  V E+ +  M D +R++V ++    E I+Q  +    EE KL  L   +    
Sbjct:   212 LSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLT 271

Query:   138 NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
                 +IF+ ++ +   L  ++   D     +H D+ Q +
Sbjct:   272 ITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKE 310


>UNIPROTKB|J9NY67 [details] [associations]
            symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
            EMBL:AAEX03006506 EMBL:AAEX03006505 RefSeq:NP_001238871.1
            ProteinModelPortal:J9NY67 Ensembl:ENSCAFT00000014379
            GeneID:100688577 KEGG:cfa:100688577 Uniprot:J9NY67
        Length = 406

 Score = 146 (56.5 bits), Expect = 1.6e-09, P = 1.6e-09
 Identities = 41/159 (25%), Positives = 70/159 (44%)

Query:    18 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 77
             I++ TP                ++  VLDEAD++   G   +  D   K  SN  +V  L
Sbjct:   154 IIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVV--L 211

Query:    78 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESL 137
              SAT+P  V E+ +  M D +R++V ++    E I+Q  +    EE KL  L   +    
Sbjct:   212 LSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLT 271

Query:   138 NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
                 +IF+ ++ +   L  ++   D     +H D+ Q +
Sbjct:   272 ITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKE 310


>UNIPROTKB|P60842 [details] [associations]
            symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003743 "translation initiation factor
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0019048 "virus-host interaction" evidence=IEA] [GO:0003729
            "mRNA binding" evidence=TAS] [GO:0004386 "helicase activity"
            evidence=TAS] [GO:0000339 "RNA cap binding" evidence=TAS]
            [GO:0008135 "translation factor activity, nucleic acid binding"
            evidence=TAS] [GO:0016281 "eukaryotic translation initiation factor
            4F complex" evidence=TAS] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0000288 "nuclear-transcribed mRNA catabolic
            process, deadenylation-dependent decay" evidence=TAS] [GO:0000289
            "nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
            [GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
            evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
            [GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
            metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
            process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
            pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
            process" evidence=TAS] Reactome:REACT_71 Reactome:REACT_21257
            Reactome:REACT_17015 InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
            Reactome:REACT_6900 EMBL:CH471108 GO:GO:0019048
            Pathway_Interaction_DB:mtor_4pathway GO:GO:0006413 GO:GO:0016281
            GO:GO:0031100 GO:GO:0003729 GO:GO:0019221 GO:GO:0008135
            GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG107989 Reactome:REACT_1762 CTD:1973 KO:K03257
            OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:D13748 EMBL:BT019880
            EMBL:BT019881 EMBL:AK312630 EMBL:AC016876 EMBL:BC006210
            EMBL:BC009585 EMBL:BC073752 IPI:IPI00025491 PIR:S33681
            RefSeq:NP_001191439.1 RefSeq:NP_001407.1 UniGene:Hs.129673 PDB:2G9N
            PDB:2ZU6 PDB:3EIQ PDBsum:2G9N PDBsum:2ZU6 PDBsum:3EIQ
            ProteinModelPortal:P60842 SMR:P60842 DIP:DIP-29755N IntAct:P60842
            MINT:MINT-5001111 STRING:P60842 PhosphoSite:P60842 DMDM:46397463
            PaxDb:P60842 PRIDE:P60842 DNASU:1973 Ensembl:ENST00000293831
            Ensembl:ENST00000577269 GeneID:1973 KEGG:hsa:1973 UCSC:uc002gho.2
            GeneCards:GC17P007476 HGNC:HGNC:3282 HPA:CAB011689 MIM:602641
            neXtProt:NX_P60842 PharmGKB:PA27710 PhylomeDB:P60842 ChiTaRS:EIF4A1
            EvolutionaryTrace:P60842 GenomeRNAi:1973 NextBio:7987
            ArrayExpress:P60842 Bgee:P60842 CleanEx:HS_EIF4A1
            Genevestigator:P60842 GermOnline:ENSG00000161960 GO:GO:0000339
            Uniprot:P60842
        Length = 406

 Score = 146 (56.5 bits), Expect = 1.6e-09, P = 1.6e-09
 Identities = 41/159 (25%), Positives = 70/159 (44%)

Query:    18 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 77
             I++ TP                ++  VLDEAD++   G   +  D   K  SN  +V  L
Sbjct:   154 IIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVV--L 211

Query:    78 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESL 137
              SAT+P  V E+ +  M D +R++V ++    E I+Q  +    EE KL  L   +    
Sbjct:   212 LSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLT 271

Query:   138 NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
                 +IF+ ++ +   L  ++   D     +H D+ Q +
Sbjct:   272 ITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKE 310


>UNIPROTKB|A6M928 [details] [associations]
            symbol:EIF4A1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003743
            "translation initiation factor activity" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
            GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
            OrthoDB:EOG4640C1 EMBL:CU914279 EMBL:DQ351283 RefSeq:NP_001093666.1
            UniGene:Ssc.22034 ProteinModelPortal:A6M928 SMR:A6M928 PRIDE:A6M928
            Ensembl:ENSSSCT00000019541 GeneID:100101929 KEGG:ssc:100101929
            Uniprot:A6M928
        Length = 406

 Score = 146 (56.5 bits), Expect = 1.6e-09, P = 1.6e-09
 Identities = 41/159 (25%), Positives = 70/159 (44%)

Query:    18 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 77
             I++ TP                ++  VLDEAD++   G   +  D   K  SN  +V  L
Sbjct:   154 IIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVV--L 211

Query:    78 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESL 137
              SAT+P  V E+ +  M D +R++V ++    E I+Q  +    EE KL  L   +    
Sbjct:   212 LSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLT 271

Query:   138 NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
                 +IF+ ++ +   L  ++   D     +H D+ Q +
Sbjct:   272 ITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKE 310


>MGI|MGI:95303 [details] [associations]
            symbol:Eif4a1 "eukaryotic translation initiation factor 4A1"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
            initiation factor activity" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
            initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 MGI:MGI:95303 GO:GO:0005524
            GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 CTD:1973
            KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:X03039 EMBL:X03040
            EMBL:L36611 EMBL:M22873 EMBL:L36608 EMBL:L36609 EMBL:L36610
            EMBL:AB011595 EMBL:AK077429 EMBL:BC049915 IPI:IPI00118676
            PIR:JS0039 RefSeq:NP_659207.1 UniGene:Mm.279821 UniGene:Mm.371557
            UniGene:Mm.473799 ProteinModelPortal:P60843 SMR:P60843
            MINT:MINT-202155 STRING:P60843 PhosphoSite:P60843
            REPRODUCTION-2DPAGE:P60843 PaxDb:P60843 PRIDE:P60843
            Ensembl:ENSMUST00000163666 GeneID:13681 KEGG:mmu:13681
            InParanoid:P60843 NextBio:284438 Bgee:P60843 CleanEx:MM_EIF4A1
            Genevestigator:P60843 GermOnline:ENSMUSG00000064241 Uniprot:P60843
        Length = 406

 Score = 146 (56.5 bits), Expect = 1.6e-09, P = 1.6e-09
 Identities = 41/159 (25%), Positives = 70/159 (44%)

Query:    18 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 77
             I++ TP                ++  VLDEAD++   G   +  D   K  SN  +V  L
Sbjct:   154 IIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVV--L 211

Query:    78 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESL 137
              SAT+P  V E+ +  M D +R++V ++    E I+Q  +    EE KL  L   +    
Sbjct:   212 LSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLT 271

Query:   138 NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
                 +IF+ ++ +   L  ++   D     +H D+ Q +
Sbjct:   272 ITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKE 310


>UNIPROTKB|Q6P3V8 [details] [associations]
            symbol:Eif4a1 "Protein Eif4a1" species:10116 "Rattus
            norvegicus" [GO:0003743 "translation initiation factor activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:735141
            GO:GO:0005524 GO:GO:0003743 EMBL:CH473948 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
            GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
            OrthoDB:EOG4640C1 EMBL:BC063812 IPI:IPI00369618 RefSeq:NP_955404.1
            UniGene:Rn.91523 SMR:Q6P3V8 STRING:Q6P3V8
            Ensembl:ENSRNOT00000049048 GeneID:287436 KEGG:rno:287436
            InParanoid:Q6P3V8 NextBio:626135 Genevestigator:Q6P3V8
            Uniprot:Q6P3V8
        Length = 406

 Score = 146 (56.5 bits), Expect = 1.6e-09, P = 1.6e-09
 Identities = 41/159 (25%), Positives = 70/159 (44%)

Query:    18 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 77
             I++ TP                ++  VLDEAD++   G   +  D   K  SN  +V  L
Sbjct:   154 IIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVV--L 211

Query:    78 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESL 137
              SAT+P  V E+ +  M D +R++V ++    E I+Q  +    EE KL  L   +    
Sbjct:   212 LSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLT 271

Query:   138 NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
                 +IF+ ++ +   L  ++   D     +H D+ Q +
Sbjct:   272 ITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKE 310


>UNIPROTKB|E1BII7 [details] [associations]
            symbol:DDX43 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
            InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
            SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
            GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 EMBL:DAAA02025231 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 EMBL:DAAA02025227 EMBL:DAAA02025228
            EMBL:DAAA02025229 EMBL:DAAA02025230 IPI:IPI00712097
            Ensembl:ENSBTAT00000029077 OMA:ANQNIPE Uniprot:E1BII7
        Length = 647

 Score = 149 (57.5 bits), Expect = 1.6e-09, P = 1.6e-09
 Identities = 51/171 (29%), Positives = 82/171 (47%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDP-VVKAC 68
             DLSK   DI+I+TP                + YLVLDEADK+ ++G      +P ++K  
Sbjct:   360 DLSK-GADIIIATPGRLHDLQMNNFVYLKSITYLVLDEADKMLDMG-----FEPQIMKIL 413

Query:    69 SN--PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 126
              +  P     + SAT P  V  LA+S + + + V VG  +  + S   + +   +E+ K 
Sbjct:   414 LDVRPDRQTVMTSATWPYAVRRLAQSYLKEPMIVYVGTLDLVAVSTVTQNIIVTTEDEKR 473

Query:   127 LALRQSFAESLNPP--VLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
               + Q+F +S++P   V+IFV  K  A  L  +L    I    +H +  Q+
Sbjct:   474 SHI-QAFIDSMSPKDKVIIFVSRKAVADHLSSDLGIRRISVESLHGNREQS 523


>UNIPROTKB|J9NU36 [details] [associations]
            symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 GeneTree:ENSGT00530000062880 EMBL:AAEX03006506
            EMBL:AAEX03006505 Ensembl:ENSCAFT00000049437 Uniprot:J9NU36
        Length = 423

 Score = 146 (56.5 bits), Expect = 1.7e-09, P = 1.7e-09
 Identities = 41/159 (25%), Positives = 70/159 (44%)

Query:    18 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 77
             I++ TP                ++  VLDEAD++   G   +  D   K  SN  +V  L
Sbjct:   171 IIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVV--L 228

Query:    78 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESL 137
              SAT+P  V E+ +  M D +R++V ++    E I+Q  +    EE KL  L   +    
Sbjct:   229 LSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLT 288

Query:   138 NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
                 +IF+ ++ +   L  ++   D     +H D+ Q +
Sbjct:   289 ITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKE 327


>FB|FBgn0035720 [details] [associations]
            symbol:CG10077 species:7227 "Drosophila melanogaster"
            [GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005875 "microtubule associated complex"
            evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005875
            EMBL:AE014296 GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779 KO:K12823
            GeneTree:ENSGT00660000095174 HSSP:P10081 UniGene:Dm.7301
            GeneID:38756 KEGG:dme:Dmel_CG10077 FlyBase:FBgn0035720
            ChiTaRS:CG10077 GenomeRNAi:38756 NextBio:810234 EMBL:AY102660
            RefSeq:NP_648062.2 SMR:Q8MZI3 IntAct:Q8MZI3 MINT:MINT-863686
            STRING:Q8MZI3 EnsemblMetazoa:FBtr0076940 EnsemblMetazoa:FBtr0333083
            UCSC:CG10077-RA InParanoid:Q8MZI3 OMA:WRACAIH Uniprot:Q8MZI3
        Length = 818

 Score = 150 (57.9 bits), Expect = 1.7e-09, P = 1.7e-09
 Identities = 47/173 (27%), Positives = 83/173 (47%)

Query:     7 RSTDLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVK 66
             ++ DL +   +I+I+TP               R  YLVLDEAD++ ++G     I  +++
Sbjct:   273 QARDLER-GVEIVIATPGRLIDFLERGTTSLKRCTYLVLDEADRMLDMG-FEPQIRKIMQ 330

Query:    67 ACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQKLVFAGSEEG- 124
                 P     ++SAT P  V +LA   +++ ++V +G  + +A+ +I Q +      E  
Sbjct:   331 QI-RPDRQVLMWSATWPKEVRQLAEEFLNNYIQVNIGSLSLSANHNILQIVDVCDENEKL 389

Query:   125 -KLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
              KL+ L    +       +IFV++K R  E+   ++    RA  IH D SQ +
Sbjct:   390 MKLIKLLTDISAENETKTIIFVETKKRVDEITRNISRQGWRACAIHGDKSQQE 442


>RGD|735141 [details] [associations]
            symbol:Eif4a1 "eukaryotic translation initiation factor 4A1"
            species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0031100 "organ regeneration" evidence=IEP] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
            PROSITE:PS51194 RGD:735141 GO:GO:0005524 GO:GO:0031100
            GO:GO:0003743 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
            HOVERGEN:HBG107989 HSSP:P10081 IPI:IPI00369618 UniGene:Rn.91523
            EMBL:AF410810 ProteinModelPortal:Q812C4 IntAct:Q812C4 STRING:Q812C4
            PRIDE:Q812C4 UCSC:RGD:735141 InParanoid:Q812C4 ArrayExpress:Q812C4
            Genevestigator:Q812C4 Uniprot:Q812C4
        Length = 138

 Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 38/133 (28%), Positives = 63/133 (47%)

Query:    44 VLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVG 103
             VLDEAD++   G   +  D   K  SN  +V  L SAT+P  V E+ +  M D +R++V 
Sbjct:     2 VLDEADEMLSRGFKDQIYDIFQKLNSNTQVV--LLSATMPSDVLEVTKKFMRDPIRILVK 59

Query:   104 RKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDI 163
             ++    E I+Q  +    EE KL  L   +        +IF+ ++ +   L  ++   D 
Sbjct:    60 KEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDF 119

Query:   164 RAGVIHSDLSQTQ 176
                 +H D+ Q +
Sbjct:   120 TVSAMHGDMDQKE 132


>UNIPROTKB|E1BGI6 [details] [associations]
            symbol:DDX54 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0030331 "estrogen receptor binding" evidence=IEA]
            [GO:0006396 "RNA processing" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IEA] [GO:0003714 "transcription corepressor activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08147 ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003714 GO:GO:0005730
            GO:GO:0003723 GO:GO:0006396 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 InterPro:IPR014014 PROSITE:PS51195
            OMA:FYIPYRP GeneTree:ENSGT00550000075100 EMBL:DAAA02045421
            IPI:IPI00690851 Ensembl:ENSBTAT00000029525 Uniprot:E1BGI6
        Length = 877

 Score = 150 (57.9 bits), Expect = 1.9e-09, P = 1.9e-09
 Identities = 48/162 (29%), Positives = 75/162 (46%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVV-KACSNPSIVR 75
             DI+I+TP                VEY+V DEAD+LFE+G   + +  ++ +       V 
Sbjct:   218 DIIIATPGRLVHVAVEMNLKLQSVEYVVFDEADRLFEMG-FAEQLQEIIGRLPGGHQTV- 275

Query:    76 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 135
              LFSATLP  + E AR+ + + V + +   +  +E +K    F   E+ K   L      
Sbjct:   276 -LFSATLPKLLVEFARAGLTEPVLIRLDVDSKLNEQLKTSF-FLVREDAKAAVLLHLLRN 333

Query:   136 SLNPP--VLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
              + P    ++FV +K  A+ L   LA   +    I+S L QT
Sbjct:   334 VVRPQDQTVVFVATKHHAEYLSELLATQGVSCAHIYSALDQT 375


>TAIR|locus:2119176 [details] [associations]
            symbol:AT4G33370 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
            "zinc ion binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343
            SMART:SM00490 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
            GO:GO:0046872 GO:GO:0008270 EMBL:AL035678 EMBL:AL161583
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            KO:K13116 HOGENOM:HOG000268792 ProtClustDB:CLSN2685494
            IPI:IPI00545227 PIR:T05988 RefSeq:NP_195063.1 UniGene:At.65448
            ProteinModelPortal:Q9SZB4 SMR:Q9SZB4 PaxDb:Q9SZB4 PRIDE:Q9SZB4
            EnsemblPlants:AT4G33370.1 GeneID:829474 KEGG:ath:AT4G33370
            GeneFarm:1022 TAIR:At4g33370 InParanoid:Q9SZB4 OMA:MEETETI
            PhylomeDB:Q9SZB4 Genevestigator:Q9SZB4 GermOnline:AT4G33370
            Uniprot:Q9SZB4
        Length = 542

 Score = 147 (56.8 bits), Expect = 2.0e-09, P = 2.0e-09
 Identities = 45/167 (26%), Positives = 80/167 (47%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVG--NLLKHIDPVVKA 67
             D+ K    I+++TP                   L LDEAD+L ++G  + ++H+    K+
Sbjct:   224 DVVKKGVHIVVATPGRLKDILAKKKMSLDACRLLTLDEADRLVDLGFEDDIRHVFDHFKS 283

Query:    68 CSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLL 127
                 ++   LFSAT+P  ++  A S +   V V VGR   A+  + Q++ +   +E K++
Sbjct:   284 -QRQTL---LFSATMPAKIQIFATSALVKPVTVNVGRAGAANLDVIQEVEYV-KQEAKIV 338

Query:   128 ALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
              L +   ++  PPVLIF ++K    +++  L    + A  IH    Q
Sbjct:   339 YLLECLQKT-TPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQ 384


>UNIPROTKB|A7E307 [details] [associations]
            symbol:DDX17 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0072358 "cardiovascular system development"
            evidence=IEA] [GO:0009791 "post-embryonic development"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
            CTD:10521 HOVERGEN:HBG015893 KO:K13178 OrthoDB:EOG4QRH3N
            GO:GO:0072358 EMBL:DAAA02014661 EMBL:DAAA02014662 EMBL:BC151648
            IPI:IPI00914517 RefSeq:NP_001095463.1 UniGene:Bt.91623
            Ensembl:ENSBTAT00000037682 GeneID:514323 KEGG:bta:514323
            InParanoid:A7E307 OMA:QQFPQPP NextBio:20871275 Uniprot:A7E307
        Length = 650

 Score = 148 (57.2 bits), Expect = 2.1e-09, P = 2.1e-09
 Identities = 51/170 (30%), Positives = 78/170 (45%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             DL +   +I I+TP               R  YLVLDEAD++ ++G     I  +V    
Sbjct:   211 DLER-GVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMG-FEPQIRKIVDQI- 267

Query:    70 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQKL-VFAGSEEG-KL 126
              P     ++SAT P  V +LA   + D  ++ VG    +A+ +I Q + V   SE+  KL
Sbjct:   268 RPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKL 327

Query:   127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             + L +          +IFV++K R  +L   +  D   A  IH D SQ +
Sbjct:   328 IQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPE 377


>UNIPROTKB|E2RJ60 [details] [associations]
            symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 EMBL:AAEX03007314
            Ensembl:ENSCAFT00000037931 Uniprot:E2RJ60
        Length = 650

 Score = 148 (57.2 bits), Expect = 2.1e-09, P = 2.1e-09
 Identities = 51/170 (30%), Positives = 78/170 (45%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             DL +   +I I+TP               R  YLVLDEAD++ ++G     I  +V    
Sbjct:   211 DLER-GVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMG-FEPQIRKIVDQI- 267

Query:    70 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQKL-VFAGSEEG-KL 126
              P     ++SAT P  V +LA   + D  ++ VG    +A+ +I Q + V   SE+  KL
Sbjct:   268 RPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKL 327

Query:   127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             + L +          +IFV++K R  +L   +  D   A  IH D SQ +
Sbjct:   328 IQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPE 377


>MGI|MGI:1914290 [details] [associations]
            symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 17"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003713 "transcription coactivator activity" evidence=ISO]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0009791
            "post-embryonic development" evidence=IMP] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0030331 "estrogen receptor binding"
            evidence=ISO] [GO:0033148 "positive regulation of intracellular
            estrogen receptor signaling pathway" evidence=ISO] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=ISO] [GO:0072358 "cardiovascular system
            development" evidence=IMP] [GO:2001014 "regulation of skeletal
            muscle cell differentiation" evidence=ISO] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1914290
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0045944
            GO:GO:0006351 GO:GO:0003723 GO:GO:0003713 GO:GO:0009791
            GO:GO:0033148 GO:GO:0030331 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 CTD:10521 HOVERGEN:HBG015893 KO:K13178
            ChiTaRS:DDX17 GO:GO:2001014 EMBL:AK039888 EMBL:BC062910
            EMBL:BC096036 IPI:IPI00396797 IPI:IPI00405364 RefSeq:NP_001035277.1
            RefSeq:NP_951061.1 RefSeq:NP_951062.1 UniGene:Mm.29644
            UniGene:Mm.298199 ProteinModelPortal:Q501J6 SMR:Q501J6
            IntAct:Q501J6 STRING:Q501J6 PhosphoSite:Q501J6
            REPRODUCTION-2DPAGE:IPI00405364 PaxDb:Q501J6 PRIDE:Q501J6
            GeneID:67040 KEGG:mmu:67040 UCSC:uc007wtq.1 UCSC:uc007wtt.1
            InParanoid:Q501J6 OrthoDB:EOG4QRH3N NextBio:323386 Bgee:Q501J6
            CleanEx:MM_DDX17 Genevestigator:Q501J6
            GermOnline:ENSMUSG00000055065 GO:GO:0072358 Uniprot:Q501J6
        Length = 650

 Score = 148 (57.2 bits), Expect = 2.1e-09, P = 2.1e-09
 Identities = 51/170 (30%), Positives = 78/170 (45%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             DL +   +I I+TP               R  YLVLDEAD++ ++G     I  +V    
Sbjct:   211 DLER-GVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMG-FEPQIRKIVDQI- 267

Query:    70 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQKL-VFAGSEEG-KL 126
              P     ++SAT P  V +LA   + D  ++ VG    +A+ +I Q + V   SE+  KL
Sbjct:   268 RPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKL 327

Query:   127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             + L +          +IFV++K R  +L   +  D   A  IH D SQ +
Sbjct:   328 IQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPE 377


>UNIPROTKB|C9JMU5 [details] [associations]
            symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268804 EMBL:Z97056 IPI:IPI01022339
            HGNC:HGNC:2740 ChiTaRS:DDX17 ProteinModelPortal:C9JMU5 SMR:C9JMU5
            STRING:C9JMU5 PRIDE:C9JMU5 Ensembl:ENST00000381633
            ArrayExpress:C9JMU5 Bgee:C9JMU5 Uniprot:C9JMU5
        Length = 652

 Score = 148 (57.2 bits), Expect = 2.1e-09, P = 2.1e-09
 Identities = 51/170 (30%), Positives = 78/170 (45%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             DL +   +I I+TP               R  YLVLDEAD++ ++G     I  +V    
Sbjct:   211 DLER-GVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMG-FEPQIRKIVDQI- 267

Query:    70 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQKL-VFAGSEEG-KL 126
              P     ++SAT P  V +LA   + D  ++ VG    +A+ +I Q + V   SE+  KL
Sbjct:   268 RPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKL 327

Query:   127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             + L +          +IFV++K R  +L   +  D   A  IH D SQ +
Sbjct:   328 IQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPE 377


>POMBASE|SPBC17D1.06 [details] [associations]
            symbol:dbp3 "ATP-dependent RNA helicase Dbp3
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000027
            "ribosomal large subunit assembly" evidence=ISO] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
            [GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0006364 "rRNA
            processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 PomBase:SPBC17D1.06 GO:GO:0005524
            GO:GO:0005730 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S
            PIR:T39709 RefSeq:NP_596388.1 ProteinModelPortal:Q10202
            STRING:Q10202 PRIDE:Q10202 EnsemblFungi:SPBC17D1.06.1
            GeneID:2540213 KEGG:spo:SPBC17D1.06 OMA:DRILVFC NextBio:20801345
            Uniprot:Q10202
        Length = 578

 Score = 147 (56.8 bits), Expect = 2.2e-09, P = 2.2e-09
 Identities = 54/173 (31%), Positives = 79/173 (45%)

Query:    15 SCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVG------NLLKHI-DPVVKA 67
             +  ++I TP              S+V YLVLDEAD++ + G      N++ H  DP    
Sbjct:   285 NASVIIGTPGRLLDLINDGSIDCSQVGYLVLDEADRMLDTGFEQDIRNIISHTPDPT--- 341

Query:    68 CSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQKLVFAGSEEGK- 125
               N S     FSAT P+ V  LA + + D V++ +G     AS++I Q +        K 
Sbjct:   342 -RNGSRQTVFFSATWPESVRALAATFLKDPVKITIGSDELAASQNITQIVEILDDPRSKE 400

Query:   126 -LL--ALRQSFAES-LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
              +L   LR+  +    +  +LIFV  K  A  + G LA      G IH D+SQ
Sbjct:   401 RMLDNLLRKHLSSGGKDDKILIFVLYKKEAARVEGTLARKYNVVG-IHGDMSQ 452


>UNIPROTKB|Q92841 [details] [associations]
            symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
            [GO:0003713 "transcription coactivator activity" evidence=IDA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0033148 "positive
            regulation of intracellular estrogen receptor signaling pathway"
            evidence=IDA] [GO:0030331 "estrogen receptor binding" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:2001014 "regulation of
            skeletal muscle cell differentiation" evidence=IMP] [GO:0005515
            "protein binding" evidence=IPI] [GO:0003724 "RNA helicase activity"
            evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
            [GO:0008186 "RNA-dependent ATPase activity" evidence=TAS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005730
            EMBL:CH471095 GO:GO:0045944 GO:GO:0006351 GO:GO:0003723
            GO:GO:0006396 GO:GO:0003713 GO:GO:0033148 GO:GO:0030331
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 GO:GO:0008186 EMBL:U59321 EMBL:CR456432
            EMBL:AL713763 EMBL:Z97056 EMBL:BC000595 IPI:IPI00651653
            IPI:IPI00651677 IPI:IPI00889541 IPI:IPI01022339 PIR:S72367
            RefSeq:NP_006377.2 UniGene:Hs.706116 UniGene:Hs.725500
            ProteinModelPortal:Q92841 SMR:Q92841 DIP:DIP-29843N IntAct:Q92841
            MINT:MINT-4545892 STRING:Q92841 PhosphoSite:Q92841 DMDM:3122595
            REPRODUCTION-2DPAGE:IPI00023785 PaxDb:Q92841 PRIDE:Q92841
            DNASU:10521 Ensembl:ENST00000403230 GeneID:10521 KEGG:hsa:10521
            UCSC:uc003avx.4 CTD:10521 GeneCards:GC22M038879 HGNC:HGNC:2740
            HPA:CAB024908 MIM:608469 neXtProt:NX_Q92841 PharmGKB:PA27206
            HOVERGEN:HBG015893 InParanoid:Q92841 KO:K13178 ChiTaRS:DDX17
            GenomeRNAi:10521 NextBio:39902 ArrayExpress:Q92841 Bgee:Q92841
            CleanEx:HS_DDX17 Genevestigator:Q92841 GermOnline:ENSG00000100201
            GO:GO:2001014 Uniprot:Q92841
        Length = 729

 Score = 148 (57.2 bits), Expect = 2.4e-09, P = 2.4e-09
 Identities = 51/170 (30%), Positives = 78/170 (45%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             DL +   +I I+TP               R  YLVLDEAD++ ++G     I  +V    
Sbjct:   290 DLER-GVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMG-FEPQIRKIVDQI- 346

Query:    70 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQKL-VFAGSEEG-KL 126
              P     ++SAT P  V +LA   + D  ++ VG    +A+ +I Q + V   SE+  KL
Sbjct:   347 RPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKL 406

Query:   127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             + L +          +IFV++K R  +L   +  D   A  IH D SQ +
Sbjct:   407 IQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPE 456


>UNIPROTKB|H3BLZ8 [details] [associations]
            symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0009791
            "post-embryonic development" evidence=IEA] [GO:0072358
            "cardiovascular system development" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0009791
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 EMBL:Z97056 HGNC:HGNC:2740
            ChiTaRS:DDX17 GO:GO:0072358 ProteinModelPortal:H3BLZ8 SMR:H3BLZ8
            Ensembl:ENST00000396821 Bgee:H3BLZ8 Uniprot:H3BLZ8
        Length = 731

 Score = 148 (57.2 bits), Expect = 2.4e-09, P = 2.4e-09
 Identities = 51/170 (30%), Positives = 78/170 (45%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             DL +   +I I+TP               R  YLVLDEAD++ ++G     I  +V    
Sbjct:   290 DLER-GVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMG-FEPQIRKIVDQI- 346

Query:    70 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQKL-VFAGSEEG-KL 126
              P     ++SAT P  V +LA   + D  ++ VG    +A+ +I Q + V   SE+  KL
Sbjct:   347 RPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKL 406

Query:   127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             + L +          +IFV++K R  +L   +  D   A  IH D SQ +
Sbjct:   407 IQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPE 456


>UNIPROTKB|F1PID8 [details] [associations]
            symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 OMA:QQFPQPP EMBL:AAEX03007314
            Ensembl:ENSCAFT00000002162 Uniprot:F1PID8
        Length = 736

 Score = 148 (57.2 bits), Expect = 2.5e-09, P = 2.5e-09
 Identities = 51/170 (30%), Positives = 78/170 (45%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             DL +   +I I+TP               R  YLVLDEAD++ ++G     I  +V    
Sbjct:   292 DLER-GVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMG-FEPQIRKIVDQI- 348

Query:    70 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQKL-VFAGSEEG-KL 126
              P     ++SAT P  V +LA   + D  ++ VG    +A+ +I Q + V   SE+  KL
Sbjct:   349 RPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKL 408

Query:   127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             + L +          +IFV++K R  +L   +  D   A  IH D SQ +
Sbjct:   409 IQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPE 458


>UNIPROTKB|F1SKQ0 [details] [associations]
            symbol:DDX17 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0072358 "cardiovascular system development"
            evidence=IEA] [GO:0009791 "post-embryonic development"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 GO:GO:0072358 OMA:QQFPQPP
            EMBL:FP102457 Ensembl:ENSSSCT00000000110 Uniprot:F1SKQ0
        Length = 736

 Score = 148 (57.2 bits), Expect = 2.5e-09, P = 2.5e-09
 Identities = 51/170 (30%), Positives = 78/170 (45%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             DL +   +I I+TP               R  YLVLDEAD++ ++G     I  +V    
Sbjct:   292 DLER-GVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMG-FEPQIRKIVDQI- 348

Query:    70 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQKL-VFAGSEEG-KL 126
              P     ++SAT P  V +LA   + D  ++ VG    +A+ +I Q + V   SE+  KL
Sbjct:   349 RPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKL 408

Query:   127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             + L +          +IFV++K R  +L   +  D   A  IH D SQ +
Sbjct:   409 IQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPE 458


>POMBASE|SPAC30D11.03 [details] [associations]
            symbol:ddx27 "ATP-dependent RNA helicase Ddx27/Drs1
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
            "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=ISO;IDA] [GO:0006364 "rRNA processing" evidence=ISO]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 PomBase:SPAC30D11.03 GO:GO:0005524 EMBL:CU329670
            GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000265456 KO:K13181 OrthoDB:EOG4B01XM PIR:S62561
            RefSeq:NP_593214.1 ProteinModelPortal:Q09903 STRING:Q09903
            EnsemblFungi:SPAC30D11.03.1 GeneID:2543155 KEGG:spo:SPAC30D11.03
            NextBio:20804181 Uniprot:Q09903
        Length = 754

 Score = 148 (57.2 bits), Expect = 2.5e-09, P = 2.5e-09
 Identities = 47/163 (28%), Positives = 76/163 (46%)

Query:    17 DILISTPXXXXXXXXXXXXXX-SRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
             DI+I+TP                 +E +V+DEAD++ E G     ++ +++AC   S   
Sbjct:   382 DIVIATPGRFIDHMRNSQGFTVENIEIMVMDEADRMLEDG-FADELNEIIQACPK-SRQT 439

Query:    76 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA- 134
              LFSAT+ D V++L R  ++  VRV V  K T ++ + Q+ V    +   L      +  
Sbjct:   440 MLFSATMTDKVDDLIRLSLNRPVRVFVDNKKTTAKLLTQEFVRVRPQRELLRPAMLIYLC 499

Query:   135 -ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
              E  +   +IF +SK  A ++        + A  IH  LSQ Q
Sbjct:   500 KELFHRRTIIFFRSKAFAHKMRVIFGLLSLNATEIHGSLSQEQ 542


>UNIPROTKB|Q81JK1 [details] [associations]
            symbol:BAS5307 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:1392 "Bacillus anthracis" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
            GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
            InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
            RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
            SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
            EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
            EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
            GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
            ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
            BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
        Length = 481

 Score = 145 (56.1 bits), Expect = 2.7e-09, P = 2.7e-09
 Identities = 42/160 (26%), Positives = 76/160 (47%)

Query:    18 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 77
             I++ TP               R++YLV+DEAD++  +G  +  ++ ++       +   L
Sbjct:   125 IVVGTPGRVLDHIEKGTLSLERLKYLVIDEADEMLNMG-FIDQVEAIIDELPTKRMTM-L 182

Query:    78 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESL 137
             FSATLP+ VE L+R+ M+    + +      ++ I+  L F   EE KL +L +      
Sbjct:   183 FSATLPEDVERLSRTYMNAPTHIEIKAAGITTDKIEHTL-FEVREEEKL-SLLKDVTTIE 240

Query:   138 NPP-VLIFVQSKDRAKELYGEL-----AFDDIRAGVIHSD 171
             NP   +IF ++++    +Y +L       D I  G++  D
Sbjct:   241 NPDSCIIFCRTQENVDHVYRQLDRVNYPCDKIHGGMVQED 280


>TIGR_CMR|BA_5703 [details] [associations]
            symbol:BA_5703 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
            GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
            InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
            RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
            SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
            EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
            EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
            GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
            ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
            BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
        Length = 481

 Score = 145 (56.1 bits), Expect = 2.7e-09, P = 2.7e-09
 Identities = 42/160 (26%), Positives = 76/160 (47%)

Query:    18 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 77
             I++ TP               R++YLV+DEAD++  +G  +  ++ ++       +   L
Sbjct:   125 IVVGTPGRVLDHIEKGTLSLERLKYLVIDEADEMLNMG-FIDQVEAIIDELPTKRMTM-L 182

Query:    78 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESL 137
             FSATLP+ VE L+R+ M+    + +      ++ I+  L F   EE KL +L +      
Sbjct:   183 FSATLPEDVERLSRTYMNAPTHIEIKAAGITTDKIEHTL-FEVREEEKL-SLLKDVTTIE 240

Query:   138 NPP-VLIFVQSKDRAKELYGEL-----AFDDIRAGVIHSD 171
             NP   +IF ++++    +Y +L       D I  G++  D
Sbjct:   241 NPDSCIIFCRTQENVDHVYRQLDRVNYPCDKIHGGMVQED 280


>UNIPROTKB|Q7L014 [details] [associations]
            symbol:DDX46 "Probable ATP-dependent RNA helicase DDX46"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
            processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
            [GO:0015030 "Cajal body" evidence=IEA] [GO:0016607 "nuclear speck"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
            "nucleolus" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
            GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            KO:K12811 EMBL:AF106680 EMBL:AB018344 EMBL:BC012304 EMBL:BK000565
            IPI:IPI00329791 RefSeq:NP_055644.2 UniGene:Hs.406549
            ProteinModelPortal:Q7L014 SMR:Q7L014 IntAct:Q7L014
            MINT:MINT-3002486 STRING:Q7L014 PhosphoSite:Q7L014 DMDM:116241326
            PaxDb:Q7L014 PeptideAtlas:Q7L014 PRIDE:Q7L014
            Ensembl:ENST00000354283 Ensembl:ENST00000452510 GeneID:9879
            KEGG:hsa:9879 UCSC:uc003kzw.3 CTD:9879 GeneCards:GC05P134094
            HGNC:HGNC:18681 HPA:HPA036554 neXtProt:NX_Q7L014
            PharmGKB:PA134894452 HOGENOM:HOG000007229 HOVERGEN:HBG081426
            InParanoid:Q7L014 OrthoDB:EOG441Q9T ChiTaRS:DDX46 GenomeRNAi:9879
            NextBio:37233 PMAP-CutDB:Q7L014 ArrayExpress:Q7L014 Bgee:Q7L014
            CleanEx:HS_DDX46 Genevestigator:Q7L014 GermOnline:ENSG00000145833
            Uniprot:Q7L014
        Length = 1031

 Score = 149 (57.5 bits), Expect = 3.0e-09, P = 3.0e-09
 Identities = 49/170 (28%), Positives = 81/170 (47%)

Query:    13 KFSCDILISTPXXXXXXXXXXXXXXS---RVEYLVLDEADKLFEVGNLLKHIDP-VVKAC 68
             K   +I++ TP              +   RV Y+VLDEAD++F++G      +P V++  
Sbjct:   493 KRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMG-----FEPQVMRIV 547

Query:    69 SN--PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEG-- 124
              N  P     +FSAT P  +E LAR I+   + V VG ++     ++Q+++    E+   
Sbjct:   548 DNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFL 607

Query:   125 KLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
             KLL L   + ES +  V+IFV  ++ A  L  +L         +H  + Q
Sbjct:   608 KLLELLGHYQESGS--VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQ 655


>UNIPROTKB|F1MX40 [details] [associations]
            symbol:DDX46 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:DAAA02020348
            EMBL:DAAA02020349 IPI:IPI00703383 Ensembl:ENSBTAT00000028682
            Uniprot:F1MX40
        Length = 1032

 Score = 149 (57.5 bits), Expect = 3.0e-09, P = 3.0e-09
 Identities = 49/170 (28%), Positives = 81/170 (47%)

Query:    13 KFSCDILISTPXXXXXXXXXXXXXXS---RVEYLVLDEADKLFEVGNLLKHIDP-VVKAC 68
             K   +I++ TP              +   RV Y+VLDEAD++F++G      +P V++  
Sbjct:   493 KRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMG-----FEPQVMRIV 547

Query:    69 SN--PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEG-- 124
              N  P     +FSAT P  +E LAR I+   + V VG ++     ++Q+++    E+   
Sbjct:   548 DNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFL 607

Query:   125 KLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
             KLL L   + ES +  V+IFV  ++ A  L  +L         +H  + Q
Sbjct:   608 KLLELLGHYQESGS--VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQ 655


>UNIPROTKB|F1PK90 [details] [associations]
            symbol:DDX46 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AAEX03007786
            Ensembl:ENSCAFT00000001619 Uniprot:F1PK90
        Length = 1032

 Score = 149 (57.5 bits), Expect = 3.0e-09, P = 3.0e-09
 Identities = 49/170 (28%), Positives = 81/170 (47%)

Query:    13 KFSCDILISTPXXXXXXXXXXXXXXS---RVEYLVLDEADKLFEVGNLLKHIDP-VVKAC 68
             K   +I++ TP              +   RV Y+VLDEAD++F++G      +P V++  
Sbjct:   493 KRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMG-----FEPQVMRIV 547

Query:    69 SN--PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEG-- 124
              N  P     +FSAT P  +E LAR I+   + V VG ++     ++Q+++    E+   
Sbjct:   548 DNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFL 607

Query:   125 KLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
             KLL L   + ES +  V+IFV  ++ A  L  +L         +H  + Q
Sbjct:   608 KLLELLGHYQESGS--VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQ 655


>UNIPROTKB|I3LR20 [details] [associations]
            symbol:DDX46 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:FP312757
            Ensembl:ENSSSCT00000027801 Uniprot:I3LR20
        Length = 1032

 Score = 149 (57.5 bits), Expect = 3.0e-09, P = 3.0e-09
 Identities = 49/170 (28%), Positives = 81/170 (47%)

Query:    13 KFSCDILISTPXXXXXXXXXXXXXXS---RVEYLVLDEADKLFEVGNLLKHIDP-VVKAC 68
             K   +I++ TP              +   RV Y+VLDEAD++F++G      +P V++  
Sbjct:   493 KRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMG-----FEPQVMRIV 547

Query:    69 SN--PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEG-- 124
              N  P     +FSAT P  +E LAR I+   + V VG ++     ++Q+++    E+   
Sbjct:   548 DNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFL 607

Query:   125 KLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
             KLL L   + ES +  V+IFV  ++ A  L  +L         +H  + Q
Sbjct:   608 KLLELLGHYQESGS--VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQ 655


>MGI|MGI:1920895 [details] [associations]
            symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1920895
            GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
            GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
            KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
            OrthoDB:EOG441Q9T ChiTaRS:DDX46 EMBL:AK129220 EMBL:BC026492
            EMBL:BC092240 IPI:IPI00468896 IPI:IPI00660556 RefSeq:NP_666087.3
            UniGene:Mm.202725 ProteinModelPortal:Q569Z5 SMR:Q569Z5
            STRING:Q569Z5 PhosphoSite:Q569Z5 PaxDb:Q569Z5 PRIDE:Q569Z5
            Ensembl:ENSMUST00000172272 GeneID:212880 KEGG:mmu:212880
            UCSC:uc011yzx.1 InParanoid:Q569Z5 OMA:IEEENKF NextBio:373723
            Bgee:Q569Z5 CleanEx:MM_DDX46 Genevestigator:Q569Z5
            GermOnline:ENSMUSG00000021500 Uniprot:Q569Z5
        Length = 1032

 Score = 149 (57.5 bits), Expect = 3.0e-09, P = 3.0e-09
 Identities = 49/170 (28%), Positives = 81/170 (47%)

Query:    13 KFSCDILISTPXXXXXXXXXXXXXXS---RVEYLVLDEADKLFEVGNLLKHIDP-VVKAC 68
             K   +I++ TP              +   RV Y+VLDEAD++F++G      +P V++  
Sbjct:   493 KRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMG-----FEPQVMRIV 547

Query:    69 SN--PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEG-- 124
              N  P     +FSAT P  +E LAR I+   + V VG ++     ++Q+++    E+   
Sbjct:   548 DNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFL 607

Query:   125 KLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
             KLL L   + ES +  V+IFV  ++ A  L  +L         +H  + Q
Sbjct:   608 KLLELLGHYQESGS--VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQ 655


>RGD|708480 [details] [associations]
            symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
            species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IEA;ISO]
            [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
            splicing" evidence=IEA] [GO:0015030 "Cajal body" evidence=IEA]
            [GO:0016607 "nuclear speck" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:708480
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0008380
            GO:GO:0016607 GO:GO:0006397 GO:GO:0003723 GO:GO:0015030
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00610000086076 KO:K12811 CTD:9879
            HOGENOM:HOG000007229 HOVERGEN:HBG081426 OrthoDB:EOG441Q9T
            EMBL:U25746 EMBL:BC107590 IPI:IPI00208266 PIR:A57514
            RefSeq:NP_620798.1 UniGene:Rn.3436 ProteinModelPortal:Q62780
            STRING:Q62780 PhosphoSite:Q62780 PRIDE:Q62780
            Ensembl:ENSRNOT00000029885 GeneID:245957 KEGG:rno:245957
            UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
            ArrayExpress:Q62780 Genevestigator:Q62780
            GermOnline:ENSRNOG00000021637 Uniprot:Q62780
        Length = 1032

 Score = 149 (57.5 bits), Expect = 3.0e-09, P = 3.0e-09
 Identities = 49/170 (28%), Positives = 81/170 (47%)

Query:    13 KFSCDILISTPXXXXXXXXXXXXXXS---RVEYLVLDEADKLFEVGNLLKHIDP-VVKAC 68
             K   +I++ TP              +   RV Y+VLDEAD++F++G      +P V++  
Sbjct:   493 KRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMG-----FEPQVMRIV 547

Query:    69 SN--PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEG-- 124
              N  P     +FSAT P  +E LAR I+   + V VG ++     ++Q+++    E+   
Sbjct:   548 DNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFL 607

Query:   125 KLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
             KLL L   + ES +  V+IFV  ++ A  L  +L         +H  + Q
Sbjct:   608 KLLELLGHYQESGS--VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQ 655


>UNIPROTKB|Q62780 [details] [associations]
            symbol:Ddx46 "Probable ATP-dependent RNA helicase DDX46"
            species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 RGD:708480 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
            GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
            KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
            OrthoDB:EOG441Q9T EMBL:U25746 EMBL:BC107590 IPI:IPI00208266
            PIR:A57514 RefSeq:NP_620798.1 UniGene:Rn.3436
            ProteinModelPortal:Q62780 STRING:Q62780 PhosphoSite:Q62780
            PRIDE:Q62780 Ensembl:ENSRNOT00000029885 GeneID:245957
            KEGG:rno:245957 UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
            ArrayExpress:Q62780 Genevestigator:Q62780
            GermOnline:ENSRNOG00000021637 Uniprot:Q62780
        Length = 1032

 Score = 149 (57.5 bits), Expect = 3.0e-09, P = 3.0e-09
 Identities = 49/170 (28%), Positives = 81/170 (47%)

Query:    13 KFSCDILISTPXXXXXXXXXXXXXXS---RVEYLVLDEADKLFEVGNLLKHIDP-VVKAC 68
             K   +I++ TP              +   RV Y+VLDEAD++F++G      +P V++  
Sbjct:   493 KRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMG-----FEPQVMRIV 547

Query:    69 SN--PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEG-- 124
              N  P     +FSAT P  +E LAR I+   + V VG ++     ++Q+++    E+   
Sbjct:   548 DNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFL 607

Query:   125 KLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
             KLL L   + ES +  V+IFV  ++ A  L  +L         +H  + Q
Sbjct:   608 KLLELLGHYQESGS--VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQ 655


>ZFIN|ZDB-GENE-030131-925 [details] [associations]
            symbol:ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
            5" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 ZFIN:ZDB-GENE-030131-925 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
            EMBL:BX085195 IPI:IPI00488168 Ensembl:ENSDART00000055492
            ArrayExpress:F1Q5L6 Bgee:F1Q5L6 Uniprot:F1Q5L6
        Length = 617

 Score = 146 (56.5 bits), Expect = 3.1e-09, P = 3.1e-09
 Identities = 48/170 (28%), Positives = 78/170 (45%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             DL +   +I I+TP               R  YLVLDEAD++ ++G     I  +V    
Sbjct:   215 DLER-GVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMG-FEPQIRKIVDQI- 271

Query:    70 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQKLVFA--GSEEGKL 126
              P     ++SAT P  V +LA   + + +++ VG    +A+ +I Q +     G +E KL
Sbjct:   272 RPDRQTLMWSATWPKEVRQLAEDFLKEYIQINVGALQLSANHNILQIVDVCNDGEKEDKL 331

Query:   127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             + L +          +IFV++K R  +L   +  D   A  IH D +Q +
Sbjct:   332 IRLLEEIMSEKENKTIIFVETKRRCDDLTRRMRRDGWPAMGIHGDKNQQE 381


>ASPGD|ASPL0000037981 [details] [associations]
            symbol:AN2932 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 EMBL:BN001306 EMBL:AACD01000051 GO:GO:0003743
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
            PROSITE:PS51195 KO:K03257 OMA:TENDARQ RefSeq:XP_660536.1
            PRIDE:Q5B948 GeneID:2874390 KEGG:ani:AN2932.2 OrthoDB:EOG4PG98F
            Uniprot:Q5B948
        Length = 398

 Score = 143 (55.4 bits), Expect = 3.2e-09, P = 3.2e-09
 Identities = 41/159 (25%), Positives = 68/159 (42%)

Query:    18 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 77
             I++ TP               +++  +LDEAD++   G   + I  + +     + V  L
Sbjct:   146 IVVGTPGRIHDMIQRRVLKTDQMKMFILDEADEMLSRG-FTEQIYDIFQLLPQSTQV-VL 203

Query:    78 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESL 137
              SAT+P  V E+    M D VR++V ++    E IKQ  +    EE KL  L   +    
Sbjct:   204 LSATMPQDVLEVTTKFMRDPVRILVKKQELTLEGIKQFYIAVEKEEWKLDTLSDLYETVT 263

Query:   138 NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
                 +IF  ++ +   L  +L   D     +H D+ Q Q
Sbjct:   264 ITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQAQ 302


>UNIPROTKB|E1BXX5 [details] [associations]
            symbol:DDX59 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
            CTD:83479 OMA:VTRPIID EMBL:AADN02033796 IPI:IPI00587299
            RefSeq:XP_422189.2 ProteinModelPortal:E1BXX5
            Ensembl:ENSGALT00000003389 GeneID:424346 KEGG:gga:424346
            NextBio:20826688 Uniprot:E1BXX5
        Length = 625

 Score = 146 (56.5 bits), Expect = 3.2e-09, P = 3.2e-09
 Identities = 42/167 (25%), Positives = 81/167 (48%)

Query:    13 KFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
             K S  ++I+TP                ++ +V+DE D + ++G   + +D +     +  
Sbjct:   326 KQSVKVIIATPGRLLEILRQSSVQLHGIKIVVVDEVDTMLKMGFQQQVLDILEDISHDHQ 385

Query:    73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAG--SEEGKLLALR 130
              +  L SAT+P  +E LA  ++H+ VR+ +G KN    +++Q +++    S++ KL  + 
Sbjct:   386 TI--LVSATIPVGIEHLANQLLHNFVRITIGEKNLPCSNVRQIILWVEEPSKKKKLFEIL 443

Query:   131 QSFAESLNPPVLIFVQSKDRAKELYGEL-AFDDIRAGVIHSDLSQTQ 176
                 +   PPVL+FV  K  A  L   +     ++   +HS+ SQ +
Sbjct:   444 ND-KKLFKPPVLVFVDCKLGADLLSDAVHKITGLQCTSMHSEKSQVE 489


>FB|FBgn0021995 [details] [associations]
            symbol:Rs1 "Rs1" species:7227 "Drosophila melanogaster"
            [GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0042254
            "ribosome biogenesis" evidence=NAS] [GO:0004004 "ATP-dependent RNA
            helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 EMBL:AE013599 GO:GO:0005524 GO:GO:0003676
            GO:GO:0042254 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            GO:GO:0016779 HSSP:P10081 GeneTree:ENSGT00550000074997 KO:K13181
            CTD:6247 EMBL:BT004908 RefSeq:NP_651970.1 UniGene:Dm.11481
            SMR:Q7JQN4 STRING:Q7JQN4 EnsemblMetazoa:FBtr0088788 GeneID:44087
            KEGG:dme:Dmel_CG2173 UCSC:CG2173-RA FlyBase:FBgn0021995
            InParanoid:Q7JQN4 OMA:EHYIHRV OrthoDB:EOG42NGFQ GenomeRNAi:44087
            NextBio:836725 Uniprot:Q7JQN4
        Length = 782

 Score = 147 (56.8 bits), Expect = 3.4e-09, P = 3.4e-09
 Identities = 41/163 (25%), Positives = 79/163 (48%)

Query:    17 DILISTPXXXXXXXXXX-XXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
             DI+I+TP                 +E L+LDEAD++ +     + +  ++ +C       
Sbjct:   281 DIVIATPGRLIDHIKNTPSFTLDSIEVLILDEADRMLDE-YFAEQMKEIINSCCKTRQTM 339

Query:    76 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLV-FAGSEEGKLLALRQSF- 133
              LFSAT+ + V++LA   +   ++V V      + +++Q+ +     +EG    +  S  
Sbjct:   340 -LFSATMSEQVKDLAAVSLDKPIKVFVNNNQQVAFNLRQEFIRIREDKEGDREPILASLI 398

Query:   134 AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
               + +   ++FVQ+K +A  L+  L    +RAG +H +L+Q Q
Sbjct:   399 CRTFHDHCMVFVQTKKQAHRLHILLGLLGVRAGELHGNLTQQQ 441


>POMBASE|SPCC10H11.01 [details] [associations]
            symbol:prp11 "ATP-dependent RNA helicase Prp11"
            species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
            RNA helicase activity" evidence=ISO] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
            "spliceosomal complex" evidence=ISO] [GO:0005829 "cytosol"
            evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
            [GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISO]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 PomBase:SPCC10H11.01 GO:GO:0005829 GO:GO:0005524
            EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0044732 GO:GO:0005681
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 GO:GO:0045292 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 EMBL:AB027964
            RefSeq:NP_587856.1 ProteinModelPortal:Q9P7C7 DIP:DIP-59804N
            IntAct:Q9P7C7 PRIDE:Q9P7C7 EnsemblFungi:SPCC10H11.01.1
            GeneID:2538936 KEGG:spo:SPCC10H11.01 OMA:SLVIIYN OrthoDB:EOG40CMR1
            NextBio:20800113 Uniprot:Q9P7C7
        Length = 1014

 Score = 148 (57.2 bits), Expect = 3.7e-09, P = 3.7e-09
 Identities = 50/175 (28%), Positives = 80/175 (45%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXS---RVEYLVLDEADKLFEVGNLLKHIDP-VV 65
             DL +   +I++ TP              +   R  YLVLDEAD++F++G      +P V+
Sbjct:   537 DLKR-GAEIVVCTPGRMIDVLSANAGRVTNLHRCTYLVLDEADRMFDLG-----FEPQVM 590

Query:    66 KACSN--PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEE 123
             +  +N  P     LFSAT P  +E LAR ++   V + VG ++  +  ++Q +V    EE
Sbjct:   591 RIINNIRPDRQTVLFSATFPRAMEALARKVLKKPVEITVGGRSVVASEVEQ-IVEVRPEE 649

Query:   124 GKLLALRQSFAESLNPPV----LIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
              K   L +   E  N  +    L+FV  ++ A  L  +L      +  IH    Q
Sbjct:   650 SKFSRLLELLGELYNNQLDVRTLVFVDRQESADALLSDLMKRGYTSNSIHGGKDQ 704


>UNIPROTKB|F1NAH6 [details] [associations]
            symbol:LOC100859810 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
            [GO:0035458 "cellular response to interferon-beta" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0051607 "defense response
            to virus" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
            GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0035458
            GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AADN02028748
            EMBL:AADN02028749 EMBL:AADN02068652 IPI:IPI00576331
            Ensembl:ENSGALT00000004794 Uniprot:F1NAH6
        Length = 607

 Score = 145 (56.1 bits), Expect = 3.9e-09, P = 3.9e-09
 Identities = 43/166 (25%), Positives = 76/166 (45%)

Query:    13 KFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSN 70
             K    ++++TP                  YL LDEAD++ ++G    ++ I    K    
Sbjct:   307 KHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKG-QR 365

Query:    71 PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
              ++   LFSAT+P  ++  A+S +   + + VGR   AS  + Q++ +   EE K++ L 
Sbjct:   366 QTL---LFSATMPKKIQNFAKSALVKPITINVGRAGAASLDVVQEVEYV-KEEAKMVYLL 421

Query:   131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             +   ++  PPVLIF + K     ++  L    + A  IH    Q +
Sbjct:   422 ECLQKT-PPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEE 466


>FB|FBgn0015331 [details] [associations]
            symbol:abs "abstrakt" species:7227 "Drosophila melanogaster"
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=NAS]
            [GO:0004386 "helicase activity" evidence=ISS] [GO:0030010
            "establishment of cell polarity" evidence=NAS] [GO:0007399 "nervous
            system development" evidence=NAS] [GO:0005634 "nucleus"
            evidence=NAS] [GO:0009653 "anatomical structure morphogenesis"
            evidence=NAS] [GO:0006915 "apoptotic process" evidence=NAS]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=IC] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
            InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
            PROSITE:PS51194 SMART:SM00343 SMART:SM00490 EMBL:AE014297
            GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0003723
            GO:GO:0004386 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 KO:K13116 EMBL:AF212866 EMBL:AF187729
            EMBL:AY051752 RefSeq:NP_524220.1 UniGene:Dm.3300
            ProteinModelPortal:Q9V3C0 SMR:Q9V3C0 DIP:DIP-21861N IntAct:Q9V3C0
            MINT:MINT-341079 STRING:Q9V3C0 PaxDb:Q9V3C0 PRIDE:Q9V3C0
            EnsemblMetazoa:FBtr0078967 GeneID:40530 KEGG:dme:Dmel_CG14637
            UCSC:CG14637-RA CTD:40530 FlyBase:FBgn0015331 InParanoid:Q9V3C0
            OMA:KDQEERS OrthoDB:EOG4KWH7Z PhylomeDB:Q9V3C0 GenomeRNAi:40530
            NextBio:819209 Bgee:Q9V3C0 GermOnline:CG14637 Uniprot:Q9V3C0
        Length = 619

 Score = 145 (56.1 bits), Expect = 4.0e-09, P = 4.0e-09
 Identities = 41/159 (25%), Positives = 72/159 (45%)

Query:    18 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 77
             I+++TP                  YL +DEAD++ ++G   + +  +            L
Sbjct:   312 IVVATPGRLMDMLDKKILTLDMCRYLCMDEADRMIDMG-FEEDVRTIFSFFKGQRQTL-L 369

Query:    78 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESL 137
             FSAT+P  ++  ARS +   V + VGR   AS ++ Q++ +   +E K++ L     ++ 
Sbjct:   370 FSATMPKKIQNFARSALVKPVTINVGRAGAASMNVTQQVEYV-KQEAKVVYLLDCLQKTA 428

Query:   138 NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
              PPVLIF + K     ++  L    + A  IH    Q +
Sbjct:   429 -PPVLIFAEKKQDVDCIHEYLLLKGVEAVAIHGGKDQEE 466


>RGD|1559513 [details] [associations]
            symbol:RGD1559513 "similar to DEAD (Asp-Glu-Ala-Asp) box
            polypeptide 41" species:10116 "Rattus norvegicus" [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00343
            SMART:SM00490 RGD:1559513 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 OrthoDB:EOG4CVG6K OMA:MEETETI
            IPI:IPI00958592 Ensembl:ENSRNOT00000033492 UCSC:RGD:1559513
            NextBio:667517 Uniprot:D4ADJ9
        Length = 621

 Score = 145 (56.1 bits), Expect = 4.0e-09, P = 4.0e-09
 Identities = 44/161 (27%), Positives = 75/161 (46%)

Query:    18 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVR 75
             I+++TP                  YL LDEAD++ ++G    ++ I    K     ++  
Sbjct:   315 IMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKG-QRQTL-- 371

Query:    76 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 135
              LFSAT+P  ++  A+S +   V + VGR   AS  + Q++ +   EE K++ L +   +
Sbjct:   372 -LFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYV-KEEAKMVYLLECLQK 429

Query:   136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             +  PPVLIF + K     ++  L    + A  IH    Q +
Sbjct:   430 T-PPPVLIFAKKKADVDAIHEYLLLKGVEAVAIHGGKDQEE 469


>TAIR|locus:2041549 [details] [associations]
            symbol:AT2G42520 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA;ISS] [GO:0005777 "peroxisome" evidence=IDA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005777 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            EMBL:AC007087 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 KO:K11594 ProtClustDB:CLSN2683925
            EMBL:BT004111 IPI:IPI00545939 PIR:H84854 RefSeq:NP_181780.1
            UniGene:At.43442 ProteinModelPortal:Q84W89 SMR:Q84W89 IntAct:Q84W89
            PaxDb:Q84W89 PRIDE:Q84W89 EnsemblPlants:AT2G42520.1 GeneID:818852
            KEGG:ath:AT2G42520 GeneFarm:1013 TAIR:At2g42520 InParanoid:Q84W89
            OMA:ADSENTG PhylomeDB:Q84W89 Genevestigator:Q84W89
            GermOnline:AT2G42520 Uniprot:Q84W89
        Length = 633

 Score = 145 (56.1 bits), Expect = 4.2e-09, P = 4.2e-09
 Identities = 47/169 (27%), Positives = 80/169 (47%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI-VR 75
             DIL++TP                + +L LDEAD++ ++G     I  +V+    P   VR
Sbjct:   289 DILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMG-FEPQIRKIVEQMDMPPRGVR 347

Query:    76 S--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK-----LL- 127
                LFSAT P  ++ LA   + + + + VGR  ++++ I Q++ F    + +     LL 
Sbjct:   348 QTLLFSATFPREIQRLAADFLANYIFLAVGRVGSSTDLIVQRVEFVLDSDKRSHLMDLLH 407

Query:   128 ALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             A R++  +      L+FV++K  A  L   L  +   A  IH D +Q +
Sbjct:   408 AQRENGIQGKQALTLVFVETKRGADSLENWLCINGFPATSIHGDRTQQE 456


>UNIPROTKB|F1NVJ6 [details] [associations]
            symbol:DDX43 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR004087
            InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322
            SMART:SM00490 GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00660000095174 OMA:VLDITHV
            EMBL:AADN02002507 EMBL:AADN02002508 IPI:IPI00594090
            Ensembl:ENSGALT00000025673 Uniprot:F1NVJ6
        Length = 642

 Score = 145 (56.1 bits), Expect = 4.2e-09, P = 4.2e-09
 Identities = 43/161 (26%), Positives = 77/161 (47%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
             DI+I+TP                + YL  +EAD++ ++G   + +  ++     P     
Sbjct:   365 DIVIATPGRLNDLQMNNFINLKSITYLA-NEADRMLDMGFEPQIMKILIDV--RPDRQTV 421

Query:    77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTAS-ESIKQKLVFAGSEEGKLLALRQSFAE 135
             + SAT PD V  LA+S + + + V VG  + A+  +++QK++    EE K  A  ++F +
Sbjct:   422 MMSATWPDGVRRLAKSYLRNPMIVYVGTLDLAAVNTVEQKVIVINEEEKK--AFMENFID 479

Query:   136 SLNPP--VLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
             S+ P    +IFV  K  A ++  +L    +    +H D  Q
Sbjct:   480 SMKPKDKAIIFVGKKSTADDIASDLGVQGVPVQSLHGDREQ 520


>TAIR|locus:504955106 [details] [associations]
            symbol:emb1138 "embryo defective 1138" species:3702
            "Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
            "zinc ion binding" evidence=IEA] [GO:0009507 "chloroplast"
            evidence=ISM;IDA] [GO:0009793 "embryo development ending in seed
            dormancy" evidence=NAS] [GO:0009570 "chloroplast stroma"
            evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0009941
            "chloroplast envelope" evidence=IDA] InterPro:IPR001650
            InterPro:IPR001878 InterPro:IPR011545 InterPro:IPR012562
            Pfam:PF00098 Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS00039
            PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
            GO:GO:0009570 GO:GO:0016020 GO:GO:0046872 GO:GO:0008270
            GO:GO:0009941 GO:GO:0003723 EMBL:AF058914 Gene3D:4.10.60.10
            SUPFAM:SSF57756 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268805 UniGene:At.23875 EMBL:AJ010457 EMBL:AC137518
            EMBL:AY080625 EMBL:AY091068 EMBL:AY094485 EMBL:AY123000
            EMBL:AY128278 EMBL:BT000713 EMBL:BT002289 EMBL:BT002456
            EMBL:AY102126 EMBL:BT004533 EMBL:AK229821 IPI:IPI00523172
            IPI:IPI00656967 PIR:T01202 PIR:T51738 RefSeq:NP_001031943.1
            RefSeq:NP_680225.2 UniGene:At.66764 ProteinModelPortal:Q8L7S8
            SMR:Q8L7S8 STRING:Q8L7S8 PaxDb:Q8L7S8 PRIDE:Q8L7S8
            EnsemblPlants:AT5G26742.2 GeneID:832713 KEGG:ath:AT5G26742
            GeneFarm:1570 TAIR:At5g26742 InParanoid:Q8L7S8 OMA:ISHEQGW
            PhylomeDB:Q8L7S8 ProtClustDB:CLSN2680279 Genevestigator:Q8L7S8
            Uniprot:Q8L7S8
        Length = 748

 Score = 145 (56.1 bits), Expect = 5.3e-09, P = 5.3e-09
 Identities = 45/163 (27%), Positives = 83/163 (50%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
             D+++ TP                VEYLVLDEAD++  VG   + ++ +++  + P+  +S
Sbjct:   230 DVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVG-FEEAVESILE--NLPTKRQS 286

Query:    77 -LFSATLPDFVEELARSIMHDAVRV-IVGRKNTA-SESIKQKLVFAGSEEGKLLALRQSF 133
              LFSAT+P +V++LAR  + + + + +VG ++   +E IK   +   S   + +      
Sbjct:   287 MLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLIT 346

Query:   134 AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
               +     ++F Q+K  A E+   L+ + I    +H D+SQ Q
Sbjct:   347 VYAKGGKTIVFTQTKRDADEVSLALS-NSIATEALHGDISQHQ 388


>UNIPROTKB|B4DLW8 [details] [associations]
            symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003712 "transcription cofactor activity"
            evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            EMBL:AC009994 GO:GO:0003724 HOVERGEN:HBG015893 UniGene:Hs.279806
            HGNC:HGNC:2746 ChiTaRS:DDX5 EMBL:AK297192 IPI:IPI00798375
            STRING:B4DLW8 Ensembl:ENST00000450599 UCSC:uc010wqa.1
            Uniprot:B4DLW8
        Length = 535

 Score = 143 (55.4 bits), Expect = 5.3e-09, P = 5.3e-09
 Identities = 47/170 (27%), Positives = 77/170 (45%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             DL +   +I I+TP               R  YLVLDEAD++ ++G     I  +V    
Sbjct:   134 DLER-GVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMG-FEPQIRKIVDQI- 190

Query:    70 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQ--KLVFAGSEEGKL 126
              P     ++SAT P  V +LA   + D + + +G    +A+ +I Q   +     ++ KL
Sbjct:   191 RPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKL 250

Query:   127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             + L +          ++FV++K R  EL  ++  D   A  IH D SQ +
Sbjct:   251 IRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQE 300


>TAIR|locus:2034481 [details] [associations]
            symbol:STRS1 "STRESS RESPONSE SUPPRESSOR 1" species:3702
            "Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA;ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0001510
            "RNA methylation" evidence=RCA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005730
            EMBL:AC079041 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811
            OMA:DRILVFC EMBL:AC074309 EMBL:AY080680 EMBL:AY117298 EMBL:AJ010458
            IPI:IPI00547293 PIR:A86444 PIR:T51739 RefSeq:NP_174479.1
            UniGene:At.20258 ProteinModelPortal:Q9C551 SMR:Q9C551 STRING:Q9C551
            PaxDb:Q9C551 PRIDE:Q9C551 EnsemblPlants:AT1G31970.1 GeneID:840087
            KEGG:ath:AT1G31970 GeneFarm:911 TAIR:At1g31970 InParanoid:Q9C551
            PhylomeDB:Q9C551 ProtClustDB:CLSN2682598 Genevestigator:Q9C551
            GermOnline:AT1G31970 Uniprot:Q9C551
        Length = 537

 Score = 143 (55.4 bits), Expect = 5.3e-09, P = 5.3e-09
 Identities = 49/166 (29%), Positives = 85/166 (51%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
             DI+I TP              S V ++VLDEAD++ ++G      +PV    SN + VR 
Sbjct:   243 DIVIGTPGRLRDLIESNVLRLSDVSFVVLDEADRMLDMG----FEEPVRFILSNTNKVRQ 298

Query:    77 L--FSATLPDFVEELARSIMH-DAVRVIVGRKN-TASESIKQ--KLVFAGSEEGKLLALR 130
             +  FSAT P  V +LA+  M  + ++VI+G  +  A+  + Q  +++   + + +L+AL 
Sbjct:   299 MVMFSATWPLDVHKLAQEFMDPNPIKVIIGSVDLAANHDVMQIIEVLDERARDQRLIALL 358

Query:   131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             + + +S    VL+F   K  A+ L   L     +A  IH + +Q++
Sbjct:   359 EKYHKSQKNRVLVFALYKVEAERLERFLQQRGWKAVSIHGNKAQSE 404


>UNIPROTKB|F1NL04 [details] [associations]
            symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0000237 "leptotene" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male meiosis I"
            evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
            [GO:0030317 "sperm motility" evidence=IEA] [GO:0032880 "regulation
            of protein localization" evidence=IEA] [GO:0033391 "chromatoid
            body" evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0048471 GO:GO:0032880 GO:GO:0003676 GO:GO:0030317
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
            GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 GO:GO:0000237 EMBL:AADN02054551
            EMBL:AADN02054552 EMBL:AADN02054553 IPI:IPI00578446
            Ensembl:ENSGALT00000038830 Uniprot:F1NL04
        Length = 542

 Score = 143 (55.4 bits), Expect = 5.4e-09, P = 5.4e-09
 Identities = 46/167 (27%), Positives = 80/167 (47%)

Query:    16 CDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
             C+IL +TP                V+YLVLDEAD++ ++G  L  +  ++     PS  R
Sbjct:   295 CNILCATPGRLLDIIEKGKISLVEVKYLVLDEADRMLDMGFGLD-MKKLISYPEMPSKDR 353

Query:    76 S---LFSATLPDFVEELARSIMH-DAVRVIVGRKNTASESIKQKLVFAG--SEEGKLLAL 129
                 +FSAT P+ V+ LA   +  D + +++G    A   ++Q ++     S+  KL+ +
Sbjct:   354 RQTLMFSATFPEEVQRLAGEFLKTDYIFLVIGNTCGACSDVQQNILQVPRLSKRDKLIEI 413

Query:   130 RQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
              QS         ++FV +K +A  L   L  +++ +  IH D  Q +
Sbjct:   414 LQSTG---GERTMVFVDTKKKADYLAAFLCQENLPSTSIHGDREQRE 457


>SGD|S000005056 [details] [associations]
            symbol:DBP2 "ATP-dependent RNA helicase of the DEAD-box
            protein family" species:4932 "Saccharomyces cerevisiae" [GO:0071042
            "nuclear polyadenylation-dependent mRNA catabolic process"
            evidence=IGI;IMP] [GO:0005739 "mitochondrion" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0008186 "RNA-dependent
            ATPase activity" evidence=IMP;IDA] [GO:0005737 "cytoplasm"
            evidence=IEA;IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0000184 "nuclear-transcribed mRNA catabolic process,
            nonsense-mediated decay" evidence=IEA;IPI] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006364
            "rRNA processing" evidence=IEA;IMP] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0042254 "ribosome biogenesis"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003724 "RNA helicase activity" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 SGD:S000005056 GO:GO:0005739 GO:GO:0005524
            GO:GO:0005634 GO:GO:0000184 EMBL:BK006947 GO:GO:0003723 EMBL:Z69382
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
            OrthoDB:EOG47SWP6 EMBL:X52649 EMBL:Z71388 EMBL:M64991 PIR:S13757
            RefSeq:NP_014287.3 RefSeq:NP_014296.4 ProteinModelPortal:P24783
            SMR:P24783 DIP:DIP-2438N IntAct:P24783 MINT:MINT-636962
            STRING:P24783 PaxDb:P24783 PeptideAtlas:P24783 EnsemblFungi:YNL112W
            GeneID:855611 GeneID:855620 KEGG:sce:YNL103W KEGG:sce:YNL112W
            CYGD:YNL112w GeneTree:ENSGT00660000095174 NextBio:979789
            Genevestigator:P24783 GermOnline:YNL112W Uniprot:P24783
        Length = 546

 Score = 143 (55.4 bits), Expect = 5.5e-09, P = 5.5e-09
 Identities = 52/178 (29%), Positives = 85/178 (47%)

Query:     2 KKELVRSTDLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHI 61
             K + +R  DLS+ S +I+I+TP               RV YLVLDEAD++ ++G     I
Sbjct:   226 KSQQIR--DLSRGS-EIVIATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMG-FEPQI 281

Query:    62 DPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQ--KLVF 118
               +V     P     ++SAT P  V++LA   ++D ++V VG    +AS +I Q  ++V 
Sbjct:   282 RKIVDQI-RPDRQTLMWSATWPKEVKQLAADYLNDPIQVQVGSLELSASHNITQIVEVVS 340

Query:   119 AGSEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
                +  +L    ++ ++      LIF  +K    ++   L  D   A  IH D  Q +
Sbjct:   341 DFEKRDRLNKYLETASQDNEYKTLIFASTKRMCDDITKYLREDGWPALAIHGDKDQRE 398


>DICTYBASE|DDB_G0293168 [details] [associations]
            symbol:ddx17 "DEAD/DEAH box helicase" species:44689
            "Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
            activity" evidence=ISS] [GO:0006396 "RNA processing" evidence=ISS]
            [GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
            activity" evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA;ISS]
            [GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0006364 "rRNA processing"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000184
            "nuclear-transcribed mRNA catabolic process, nonsense-mediated
            decay" evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            dictyBase:DDB_G0293168 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
            GenomeReviews:CM000155_GR GO:GO:0000184 GO:GO:0003723 GO:GO:0006396
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
            PROSITE:PS51195 EMBL:AAFI02000199 KO:K12823 GO:GO:0008186
            RefSeq:XP_629279.1 HSSP:P09052 ProteinModelPortal:Q54CE0
            PRIDE:Q54CE0 EnsemblProtists:DDB0233431 GeneID:8629001
            KEGG:ddi:DDB_G0293168 Uniprot:Q54CE0
        Length = 785

 Score = 145 (56.1 bits), Expect = 5.6e-09, P = 5.6e-09
 Identities = 47/167 (28%), Positives = 79/167 (47%)

Query:    13 KFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
             K   +I+I+TP               RV YLVLDEAD++ ++G     I  ++     P 
Sbjct:   505 KKGVEIVIATPGRLIDILESGKTNLRRVTYLVLDEADRMLDMG-FEPQIRKIISQI-RPD 562

Query:    73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQKLVFAGSEEGKLLALRQ 131
                 +FSAT P  V+ LA   + D ++V +G    TA+ +++Q +      E K   L  
Sbjct:   563 RQTLMFSATWPKEVQALAHDFLTDHIQVHIGSTEITANHNVRQIVEVCQDFEKKERML-- 620

Query:   132 SFAESL--NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             SF  S+  +  V++F +++    +L   L F   ++  IH + SQ +
Sbjct:   621 SFLGSVGRDEKVIVFAETRKGVDDLQRVLQFSGFKSIGIHGNKSQPE 667


>UNIPROTKB|F1N991 [details] [associations]
            symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0000237 "leptotene"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male
            meiosis I" evidence=IEA] [GO:0007283 "spermatogenesis"
            evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
            [GO:0032880 "regulation of protein localization" evidence=IEA]
            [GO:0033391 "chromatoid body" evidence=IEA] [GO:0048471
            "perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0003676
            GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0033391 GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00620000087942 GO:GO:0000237
            OMA:GINFDKF EMBL:AADN02054551 EMBL:AADN02054552 EMBL:AADN02054553
            IPI:IPI00819436 ProteinModelPortal:F1N991
            Ensembl:ENSGALT00000023724 Uniprot:F1N991
        Length = 568

 Score = 143 (55.4 bits), Expect = 5.8e-09, P = 5.8e-09
 Identities = 46/167 (27%), Positives = 80/167 (47%)

Query:    16 CDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
             C+IL +TP                V+YLVLDEAD++ ++G  L  +  ++     PS  R
Sbjct:   295 CNILCATPGRLLDIIEKGKISLVEVKYLVLDEADRMLDMGFGLD-MKKLISYPEMPSKDR 353

Query:    76 S---LFSATLPDFVEELARSIMH-DAVRVIVGRKNTASESIKQKLVFAG--SEEGKLLAL 129
                 +FSAT P+ V+ LA   +  D + +++G    A   ++Q ++     S+  KL+ +
Sbjct:   354 RQTLMFSATFPEEVQRLAGEFLKTDYIFLVIGNTCGACSDVQQNILQVPRLSKRDKLIEI 413

Query:   130 RQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
              QS         ++FV +K +A  L   L  +++ +  IH D  Q +
Sbjct:   414 LQSTG---GERTMVFVDTKKKADYLAAFLCQENLPSTSIHGDREQRE 457


>FB|FBgn0030631 [details] [associations]
            symbol:CG6227 species:7227 "Drosophila melanogaster"
            [GO:0003729 "mRNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
            RNA helicase activity" evidence=ISS] [GO:0003724 "RNA helicase
            activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
            evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000381
            "regulation of alternative mRNA splicing, via spliceosome"
            evidence=IMP] [GO:0005634 "nucleus" evidence=IC] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0000398
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
            HSSP:Q58083 GeneTree:ENSGT00610000086076 KO:K12811 OMA:RGRYKVL
            EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
            EMBL:FJ764855 EMBL:FJ764858 FlyBase:FBgn0030631 EMBL:BT016090
            RefSeq:NP_573020.2 UniGene:Dm.168 SMR:Q9VXW2 IntAct:Q9VXW2
            EnsemblMetazoa:FBtr0074011 GeneID:32464 KEGG:dme:Dmel_CG6227
            UCSC:CG6227-RA InParanoid:Q9VXW2 GenomeRNAi:32464 NextBio:778600
            Uniprot:Q9VXW2
        Length = 1224

 Score = 147 (56.8 bits), Expect = 6.0e-09, P = 6.0e-09
 Identities = 47/170 (27%), Positives = 81/170 (47%)

Query:    13 KFSCDILISTPXXXXXXXXXXXXXXS---RVEYLVLDEADKLFEVG---NLLKHIDPVVK 66
             K   +I++ TP              +   RV Y+VLDEAD++F++G    +++ ID V  
Sbjct:   631 KRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNV-- 688

Query:    67 ACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEG-- 124
                 P     +FSAT P  +E LAR I+   + VIVG ++   + ++Q +V    +    
Sbjct:   689 ---RPDRQTVMFSATFPRQMEALARRILKKPIEVIVGGRSVVCKEVEQHVVILNDDAKFF 745

Query:   125 KLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
             KLL L   + E+ +  +++FV  ++ A  L  +L         +H  + Q
Sbjct:   746 KLLELLGIYQEAGS--IIVFVDKQENADILLRDLMKASYPCMSLHGGIDQ 793


>UNIPROTKB|F1MBQ8 [details] [associations]
            symbol:DDX5 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0072332 "intrinsic apoptotic signaling pathway by p53
            class mediator" evidence=IEA] [GO:0071013 "catalytic step 2
            spliceosome" evidence=IEA] [GO:0060765 "regulation of androgen
            receptor signaling pathway" evidence=IEA] [GO:0050681 "androgen
            receptor binding" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0043517 "positive regulation of DNA damage response, signal
            transduction by p53 class mediator" evidence=IEA] [GO:0036002
            "pre-mRNA binding" evidence=IEA] [GO:0033148 "positive regulation
            of intracellular estrogen receptor signaling pathway" evidence=IEA]
            [GO:0030331 "estrogen receptor binding" evidence=IEA] [GO:0007623
            "circadian rhythm" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0003713 "transcription coactivator activity"
            evidence=IEA] [GO:0001701 "in utero embryonic development"
            evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
            via spliceosome" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0003724 "RNA helicase
            activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
            GO:GO:0000122 GO:GO:0003713 GO:GO:0033148 GO:GO:0043517
            GO:GO:0060765 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
            GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
            KO:K12823 OMA:IDAMSGY GeneTree:ENSGT00660000095174 CTD:1655
            EMBL:DAAA02049347 IPI:IPI01002739 RefSeq:NP_001178324.1
            UniGene:Bt.64934 ProteinModelPortal:F1MBQ8 SMR:F1MBQ8 PRIDE:F1MBQ8
            Ensembl:ENSBTAT00000024514 GeneID:533700 KEGG:bta:533700
            NextBio:20876124 ArrayExpress:F1MBQ8 Uniprot:F1MBQ8
        Length = 614

 Score = 143 (55.4 bits), Expect = 6.5e-09, P = 6.5e-09
 Identities = 47/170 (27%), Positives = 77/170 (45%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             DL +   +I I+TP               R  YLVLDEAD++ ++G     I  +V    
Sbjct:   213 DLER-GVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMG-FEPQIRKIVDQI- 269

Query:    70 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQ--KLVFAGSEEGKL 126
              P     ++SAT P  V +LA   + D + + +G    +A+ +I Q   +     ++ KL
Sbjct:   270 RPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKL 329

Query:   127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             + L +          ++FV++K R  EL  ++  D   A  IH D SQ +
Sbjct:   330 IRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQE 379


>UNIPROTKB|J3KTA4 [details] [associations]
            symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003712 "transcription cofactor activity"
            evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            EMBL:AC009994 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
            HGNC:HGNC:2746 ChiTaRS:DDX5 ProteinModelPortal:J3KTA4
            Ensembl:ENST00000578804 Uniprot:J3KTA4
        Length = 614

 Score = 143 (55.4 bits), Expect = 6.5e-09, P = 6.5e-09
 Identities = 47/170 (27%), Positives = 77/170 (45%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             DL +   +I I+TP               R  YLVLDEAD++ ++G     I  +V    
Sbjct:   213 DLER-GVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMG-FEPQIRKIVDQI- 269

Query:    70 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQ--KLVFAGSEEGKL 126
              P     ++SAT P  V +LA   + D + + +G    +A+ +I Q   +     ++ KL
Sbjct:   270 RPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKL 329

Query:   127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             + L +          ++FV++K R  EL  ++  D   A  IH D SQ +
Sbjct:   330 IRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQE 379


>UNIPROTKB|P17844 [details] [associations]
            symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
            species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0001701 "in utero embryonic development" evidence=IEA]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
            [GO:0005516 "calmodulin binding" evidence=IEA] [GO:0007623
            "circadian rhythm" evidence=IEA] [GO:0019899 "enzyme binding"
            evidence=IEA] [GO:0045069 "regulation of viral genome replication"
            evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
            evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IMP;NAS]
            [GO:0016049 "cell growth" evidence=NAS] [GO:0005634 "nucleus"
            evidence=IDA;NAS] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=IC] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0043517 "positive regulation of DNA damage response, signal
            transduction by p53 class mediator" evidence=IMP] [GO:0072332
            "intrinsic apoptotic signaling pathway by p53 class mediator"
            evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:2001014
            "regulation of skeletal muscle cell differentiation" evidence=ISS]
            [GO:0045667 "regulation of osteoblast differentiation"
            evidence=ISS] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IDA] [GO:0050681
            "androgen receptor binding" evidence=IDA] [GO:0060765 "regulation
            of androgen receptor signaling pathway" evidence=IMP] [GO:0033148
            "positive regulation of intracellular estrogen receptor signaling
            pathway" evidence=IDA] [GO:0003713 "transcription coactivator
            activity" evidence=IDA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0030331 "estrogen receptor binding" evidence=IDA] [GO:0036002
            "pre-mRNA binding" evidence=IDA] [GO:0000381 "regulation of
            alternative mRNA splicing, via spliceosome" evidence=IDA]
            [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005730 GO:GO:0016049 GO:GO:0001701 GO:GO:0045944
            GO:GO:0006351 GO:GO:0000122 GO:GO:0003713 EMBL:CH471109
            GO:GO:0033148 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
            GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 GO:GO:0000398
            GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0045069 GO:GO:0004004 GO:GO:0000381 eggNOG:COG0513
            GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
            HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY HOVERGEN:HBG015893
            GO:GO:2001014 EMBL:X52104 EMBL:AF015812 EMBL:BT006943 EMBL:AB451257
            EMBL:BC016027 EMBL:X15729 EMBL:AJ010931 IPI:IPI00017617 PIR:JC1087
            RefSeq:NP_004387.1 UniGene:Hs.279806 PDB:3FE2 PDB:4A4D PDBsum:3FE2
            PDBsum:4A4D ProteinModelPortal:P17844 SMR:P17844 DIP:DIP-29844N
            IntAct:P17844 MINT:MINT-5000516 STRING:P17844 PhosphoSite:P17844
            DMDM:129383 SWISS-2DPAGE:P17844 PaxDb:P17844 PeptideAtlas:P17844
            PRIDE:P17844 DNASU:1655 Ensembl:ENST00000225792
            Ensembl:ENST00000574715 GeneID:1655 KEGG:hsa:1655 UCSC:uc002jej.2
            CTD:1655 GeneCards:GC17M062494 HGNC:HGNC:2746 HPA:CAB005868
            HPA:HPA020043 MIM:180630 neXtProt:NX_P17844 PharmGKB:PA27228
            InParanoid:P17844 OrthoDB:EOG4BVRTM PhylomeDB:P17844 ChiTaRS:DDX5
            EvolutionaryTrace:P17844 GenomeRNAi:1655 NextBio:6816
            ArrayExpress:P17844 Bgee:P17844 CleanEx:HS_DDX5
            Genevestigator:P17844 GermOnline:ENSG00000108654 Uniprot:P17844
        Length = 614

 Score = 143 (55.4 bits), Expect = 6.5e-09, P = 6.5e-09
 Identities = 47/170 (27%), Positives = 77/170 (45%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             DL +   +I I+TP               R  YLVLDEAD++ ++G     I  +V    
Sbjct:   213 DLER-GVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMG-FEPQIRKIVDQI- 269

Query:    70 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQ--KLVFAGSEEGKL 126
              P     ++SAT P  V +LA   + D + + +G    +A+ +I Q   +     ++ KL
Sbjct:   270 RPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKL 329

Query:   127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             + L +          ++FV++K R  EL  ++  D   A  IH D SQ +
Sbjct:   330 IRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQE 379


>UNIPROTKB|Q4R6M5 [details] [associations]
            symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
            species:9541 "Macaca fascicularis" [GO:0000122 "negative regulation
            of transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0000381 "regulation of alternative mRNA splicing, via
            spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
            activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
            evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
            "estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
            regulation of DNA damage response, signal transduction by p53 class
            mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
            differentiation" evidence=ISS] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
            "regulation of androgen receptor signaling pathway" evidence=ISS]
            [GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
            mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
            cell differentiation" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
            GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
            GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
            GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
            InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014
            HSSP:P10081 EMBL:AB169157 ProteinModelPortal:Q4R6M5 PRIDE:Q4R6M5
            Uniprot:Q4R6M5
        Length = 614

 Score = 143 (55.4 bits), Expect = 6.5e-09, P = 6.5e-09
 Identities = 47/170 (27%), Positives = 77/170 (45%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             DL +   +I I+TP               R  YLVLDEAD++ ++G     I  +V    
Sbjct:   213 DLER-GVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMG-FEPQIRKIVDQI- 269

Query:    70 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQ--KLVFAGSEEGKL 126
              P     ++SAT P  V +LA   + D + + +G    +A+ +I Q   +     ++ KL
Sbjct:   270 RPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKL 329

Query:   127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             + L +          ++FV++K R  EL  ++  D   A  IH D SQ +
Sbjct:   330 IRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQE 379


>UNIPROTKB|Q5R4I9 [details] [associations]
            symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
            species:9601 "Pongo abelii" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0000381 "regulation of alternative mRNA splicing, via
            spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
            activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
            evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
            "estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
            regulation of DNA damage response, signal transduction by p53 class
            mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
            differentiation" evidence=ISS] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
            "regulation of androgen receptor signaling pathway" evidence=ISS]
            [GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
            mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
            cell differentiation" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
            GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
            GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
            GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
            InterPro:IPR014014 PROSITE:PS51195 KO:K12823 HOVERGEN:HBG015893
            GO:GO:2001014 HSSP:P10081 CTD:1655 EMBL:CR861259
            RefSeq:NP_001126958.1 UniGene:Pab.18500 ProteinModelPortal:Q5R4I9
            PRIDE:Q5R4I9 GeneID:100173977 KEGG:pon:100173977 InParanoid:Q5R4I9
            Uniprot:Q5R4I9
        Length = 614

 Score = 143 (55.4 bits), Expect = 6.5e-09, P = 6.5e-09
 Identities = 47/170 (27%), Positives = 77/170 (45%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             DL +   +I I+TP               R  YLVLDEAD++ ++G     I  +V    
Sbjct:   213 DLER-GVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMG-FEPQIRKIVDQI- 269

Query:    70 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQ--KLVFAGSEEGKL 126
              P     ++SAT P  V +LA   + D + + +G    +A+ +I Q   +     ++ KL
Sbjct:   270 RPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKL 329

Query:   127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             + L +          ++FV++K R  EL  ++  D   A  IH D SQ +
Sbjct:   330 IRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQE 379


>MGI|MGI:105037 [details] [associations]
            symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 5"
            species:10090 "Mus musculus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISO]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000381
            "regulation of alternative mRNA splicing, via spliceosome"
            evidence=ISO] [GO:0001701 "in utero embryonic development"
            evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003712 "transcription cofactor activity" evidence=IDA]
            [GO:0003713 "transcription coactivator activity" evidence=ISO]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0003724 "RNA helicase
            activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISO] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005516 "calmodulin binding" evidence=ISO] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IC]
            [GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005730
            "nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
            evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IMP]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
            acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
            [GO:0019899 "enzyme binding" evidence=ISO] [GO:0030331 "estrogen
            receptor binding" evidence=ISO] [GO:0030529 "ribonucleoprotein
            complex" evidence=ISO] [GO:0033148 "positive regulation of
            intracellular estrogen receptor signaling pathway" evidence=ISO]
            [GO:0036002 "pre-mRNA binding" evidence=ISO] [GO:0043517 "positive
            regulation of DNA damage response, signal transduction by p53 class
            mediator" evidence=ISO] [GO:0045069 "regulation of viral genome
            replication" evidence=ISO] [GO:0045667 "regulation of osteoblast
            differentiation" evidence=IMP] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISO] [GO:0048306 "calcium-dependent protein binding"
            evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
            [GO:0060765 "regulation of androgen receptor signaling pathway"
            evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=ISO] [GO:0072332 "intrinsic apoptotic signaling pathway by
            p53 class mediator" evidence=ISO] [GO:2001014 "regulation of
            skeletal muscle cell differentiation" evidence=IMP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:105037
            GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0007623
            GO:GO:0001701 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
            GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
            GO:GO:0030529 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
            GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
            EMBL:AL603664 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
            PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014 OrthoDB:EOG4BVRTM
            ChiTaRS:DDX5 EMBL:X65627 IPI:IPI00420363 PIR:I48385
            UniGene:Mm.220038 ProteinModelPortal:Q61656 SMR:Q61656
            DIP:DIP-32293N IntAct:Q61656 STRING:Q61656 PhosphoSite:Q61656
            PaxDb:Q61656 PRIDE:Q61656 InParanoid:Q61656 CleanEx:MM_DDX5
            Genevestigator:Q61656 GermOnline:ENSMUSG00000020719 Uniprot:Q61656
        Length = 614

 Score = 143 (55.4 bits), Expect = 6.5e-09, P = 6.5e-09
 Identities = 47/170 (27%), Positives = 77/170 (45%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             DL +   +I I+TP               R  YLVLDEAD++ ++G     I  +V    
Sbjct:   213 DLER-GVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMG-FEPQIRKIVDQI- 269

Query:    70 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQ--KLVFAGSEEGKL 126
              P     ++SAT P  V +LA   + D + + +G    +A+ +I Q   +     ++ KL
Sbjct:   270 RPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKL 329

Query:   127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             + L +          ++FV++K R  EL  ++  D   A  IH D SQ +
Sbjct:   330 IRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQE 379


>RGD|619906 [details] [associations]
            symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box helicase 5" species:10116
            "Rattus norvegicus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA;ISO]
            [GO:0000381 "regulation of alternative mRNA splicing, via
            spliceosome" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
            development" evidence=IEA;ISO] [GO:0003712 "transcription cofactor
            activity" evidence=ISO] [GO:0003713 "transcription coactivator
            activity" evidence=IEA;ISO] [GO:0003724 "RNA helicase activity"
            evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005516 "calmodulin binding" evidence=IDA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
            [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007623 "circadian
            rhythm" evidence=IEA;ISO] [GO:0019899 "enzyme binding"
            evidence=IDA] [GO:0030331 "estrogen receptor binding"
            evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
            evidence=ISO] [GO:0033148 "positive regulation of intracellular
            estrogen receptor signaling pathway" evidence=IEA;ISO] [GO:0036002
            "pre-mRNA binding" evidence=IEA;ISO] [GO:0043517 "positive
            regulation of DNA damage response, signal transduction by p53 class
            mediator" evidence=IEA;ISO] [GO:0045069 "regulation of viral genome
            replication" evidence=IMP] [GO:0045667 "regulation of osteoblast
            differentiation" evidence=ISO] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA;ISO] [GO:0048306 "calcium-dependent protein binding"
            evidence=IDA] [GO:0050681 "androgen receptor binding"
            evidence=IEA;ISO] [GO:0060765 "regulation of androgen receptor
            signaling pathway" evidence=IEA;ISO] [GO:0071013 "catalytic step 2
            spliceosome" evidence=IEA;ISO] [GO:0072332 "intrinsic apoptotic
            signaling pathway by p53 class mediator" evidence=IEA;ISO]
            [GO:2001014 "regulation of skeletal muscle cell differentiation"
            evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            RGD:619906 GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
            GO:GO:0019899 GO:GO:0000122 GO:GO:0003713 GO:GO:0005516
            GO:GO:0048306 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
            EMBL:CH473948 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0045069 GO:GO:0004004
            GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
            HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
            GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 CTD:1655
            EMBL:BC079036 IPI:IPI00464718 RefSeq:NP_001007614.1
            UniGene:Rn.162208 IntAct:Q6AYI1 STRING:Q6AYI1
            Ensembl:ENSRNOT00000048490 GeneID:287765 KEGG:rno:287765
            UCSC:RGD:619906 InParanoid:Q6AYI1 NextBio:626970
            Genevestigator:Q6AYI1 Uniprot:Q6AYI1
        Length = 615

 Score = 143 (55.4 bits), Expect = 6.5e-09, P = 6.5e-09
 Identities = 47/170 (27%), Positives = 77/170 (45%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             DL +   +I I+TP               R  YLVLDEAD++ ++G     I  +V    
Sbjct:   213 DLER-GVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMG-FEPQIRKIVDQI- 269

Query:    70 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQ--KLVFAGSEEGKL 126
              P     ++SAT P  V +LA   + D + + +G    +A+ +I Q   +     ++ KL
Sbjct:   270 RPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKL 329

Query:   127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             + L +          ++FV++K R  EL  ++  D   A  IH D SQ +
Sbjct:   330 IRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQE 379


>UNIPROTKB|A3KN07 [details] [associations]
            symbol:DDX41 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
            [GO:0051607 "defense response to virus" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0035458 "cellular response to
            interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
            GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
            GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
            KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
            OrthoDB:EOG4CVG6K EMBL:DAAA02020056 EMBL:BC133465 IPI:IPI00840518
            RefSeq:NP_001076071.1 UniGene:Bt.5258 SMR:A3KN07
            Ensembl:ENSBTAT00000043510 GeneID:505276 KEGG:bta:505276
            InParanoid:A3KN07 NextBio:20867058 Uniprot:A3KN07
        Length = 622

 Score = 143 (55.4 bits), Expect = 6.7e-09, P = 6.7e-09
 Identities = 43/161 (26%), Positives = 75/161 (46%)

Query:    18 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVR 75
             ++++TP                  YL LDEAD++ ++G    ++ I    K     ++  
Sbjct:   316 MMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKG-QRQTL-- 372

Query:    76 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 135
              LFSAT+P  ++  A+S +   V + VGR   AS  + Q++ +   EE K++ L +   +
Sbjct:   373 -LFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYV-KEEAKMVYLLECLQK 430

Query:   136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             +  PPVLIF + K     ++  L    + A  IH    Q +
Sbjct:   431 T-PPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEE 470


>UNIPROTKB|E2R052 [details] [associations]
            symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0035458 "cellular
            response to interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic
            reticulum" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
            GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
            GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 KO:K13116 CTD:51428 EMBL:AAEX03002959
            RefSeq:XP_536417.2 ProteinModelPortal:E2R052
            Ensembl:ENSCAFT00000025858 GeneID:479274 KEGG:cfa:479274
            NextBio:20854482 Uniprot:E2R052
        Length = 622

 Score = 143 (55.4 bits), Expect = 6.7e-09, P = 6.7e-09
 Identities = 43/161 (26%), Positives = 75/161 (46%)

Query:    18 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVR 75
             ++++TP                  YL LDEAD++ ++G    ++ I    K     ++  
Sbjct:   316 MMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKG-QRQTL-- 372

Query:    76 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 135
              LFSAT+P  ++  A+S +   V + VGR   AS  + Q++ +   EE K++ L +   +
Sbjct:   373 -LFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYV-KEEAKMVYLLECLQK 430

Query:   136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             +  PPVLIF + K     ++  L    + A  IH    Q +
Sbjct:   431 T-PPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEE 470


>UNIPROTKB|Q9UJV9 [details] [associations]
            symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0035458
            "cellular response to interferon-beta" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0051607 "defense response to virus"
            evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=IC] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IDA] [GO:0007275 "multicellular organismal development"
            evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
            [GO:0006915 "apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
            PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005783
            GO:GO:0007275 GO:GO:0005524 GO:GO:0006915 GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
            GO:GO:0003723 GO:GO:0035458 GO:GO:0000398 GO:GO:0071013
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH471195
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG015893 KO:K13116 EMBL:AF195417 EMBL:AK001255
            EMBL:AK027768 EMBL:AK315491 EMBL:BC015476 EMBL:AL137455
            EMBL:BX641072 IPI:IPI00007208 PIR:T46269 RefSeq:NP_057306.2
            UniGene:Hs.484288 PDB:2P6N PDBsum:2P6N ProteinModelPortal:Q9UJV9
            SMR:Q9UJV9 IntAct:Q9UJV9 MINT:MINT-3081244 STRING:Q9UJV9
            PhosphoSite:Q9UJV9 DMDM:20532370 PaxDb:Q9UJV9 PeptideAtlas:Q9UJV9
            PRIDE:Q9UJV9 DNASU:51428 Ensembl:ENST00000507955 GeneID:51428
            KEGG:hsa:51428 UCSC:uc003mhn.3 CTD:51428 GeneCards:GC05M176938
            HGNC:HGNC:18674 HPA:HPA017911 MIM:608170 neXtProt:NX_Q9UJV9
            PharmGKB:PA134908862 HOGENOM:HOG000268792 InParanoid:Q9UJV9
            OrthoDB:EOG4CVG6K PhylomeDB:Q9UJV9 ChiTaRS:DDX41
            EvolutionaryTrace:Q9UJV9 GenomeRNAi:51428 NextBio:54987
            ArrayExpress:Q9UJV9 Bgee:Q9UJV9 CleanEx:HS_DDX41
            Genevestigator:Q9UJV9 GermOnline:ENSG00000183258 Uniprot:Q9UJV9
        Length = 622

 Score = 143 (55.4 bits), Expect = 6.7e-09, P = 6.7e-09
 Identities = 43/161 (26%), Positives = 75/161 (46%)

Query:    18 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVR 75
             ++++TP                  YL LDEAD++ ++G    ++ I    K     ++  
Sbjct:   316 MMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKG-QRQTL-- 372

Query:    76 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 135
              LFSAT+P  ++  A+S +   V + VGR   AS  + Q++ +   EE K++ L +   +
Sbjct:   373 -LFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYV-KEEAKMVYLLECLQK 430

Query:   136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             +  PPVLIF + K     ++  L    + A  IH    Q +
Sbjct:   431 T-PPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEE 470


>UNIPROTKB|Q4K4H4 [details] [associations]
            symbol:rhlE_2 "Putative ATP-dependent RNA helicase"
            species:220664 "Pseudomonas protegens Pf-5" [GO:0006139
            "nucleobase-containing compound metabolic process" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0006139 GO:GO:0003676
            EMBL:CP000076 GenomeReviews:CP000076_GR InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
            OMA:DGDLMGF ProtClustDB:CLSK865855 RefSeq:YP_262859.1
            ProteinModelPortal:Q4K4H4 GeneID:3480173 KEGG:pfl:PFL_5801
            PATRIC:19881109 BioCyc:PFLU220664:GIX8-5841-MONOMER Uniprot:Q4K4H4
        Length = 622

 Score = 143 (55.4 bits), Expect = 6.7e-09, P = 6.7e-09
 Identities = 48/160 (30%), Positives = 70/160 (43%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
             D+L++ P              S VE LVLDEAD++ ++G     +  V K  +     R 
Sbjct:   131 DVLVACPGRLLDLAGQGSVDLSHVEILVLDEADRMLDMG----FVHDVKKVLARLPAKRQ 186

Query:    77 --LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
               LFSAT    + +LA  ++H+  R+ V   NT  E I+Q+ VF      K   L     
Sbjct:   187 NLLFSATFSKDITDLAGKLLHNPERIEVTPPNTTVERIEQR-VFRLPASHKRALLAHLIT 245

Query:   135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
                   VL+F ++K  A  L   L    + A  IH + SQ
Sbjct:   246 AGAWEQVLVFTRTKHGANRLAEYLDKHGLSAVAIHGNKSQ 285


>MGI|MGI:1920185 [details] [associations]
            symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IDA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005783
            "endoplasmic reticulum" evidence=IDA] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0035458 "cellular response to
            interferon-beta" evidence=IMP] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0046872 "metal ion binding" evidence=IEA] [GO:0051607 "defense
            response to virus" evidence=IMP] [GO:0071013 "catalytic step 2
            spliceosome" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
            MGI:MGI:1920185 GO:GO:0005783 GO:GO:0005524 GO:GO:0005634
            GO:GO:0008380 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
            GO:GO:0006397 GO:GO:0045944 GO:GO:0051607 GO:GO:0003723
            GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
            KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
            OrthoDB:EOG4CVG6K EMBL:AK156957 EMBL:BC011308 IPI:IPI00127071
            RefSeq:NP_598820.2 UniGene:Mm.205045 ProteinModelPortal:Q91VN6
            SMR:Q91VN6 IntAct:Q91VN6 STRING:Q91VN6 PhosphoSite:Q91VN6
            PaxDb:Q91VN6 PRIDE:Q91VN6 Ensembl:ENSMUST00000021956 GeneID:72935
            KEGG:mmu:72935 InParanoid:Q3U0E0 NextBio:337171 Bgee:Q91VN6
            CleanEx:MM_DDX41 Genevestigator:Q91VN6
            GermOnline:ENSMUSG00000021494 Uniprot:Q91VN6
        Length = 622

 Score = 143 (55.4 bits), Expect = 6.7e-09, P = 6.7e-09
 Identities = 43/161 (26%), Positives = 75/161 (46%)

Query:    18 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVR 75
             ++++TP                  YL LDEAD++ ++G    ++ I    K     ++  
Sbjct:   316 MMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKG-QRQTL-- 372

Query:    76 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 135
              LFSAT+P  ++  A+S +   V + VGR   AS  + Q++ +   EE K++ L +   +
Sbjct:   373 -LFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYV-KEEAKMVYLLECLQK 430

Query:   136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             +  PPVLIF + K     ++  L    + A  IH    Q +
Sbjct:   431 T-PPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEE 470


>RGD|1311758 [details] [associations]
            symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
            species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
            evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0005783 "endoplasmic
            reticulum" evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0035458 "cellular response to interferon-beta"
            evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0051607
            "defense response to virus" evidence=IEA;ISO] [GO:0071013
            "catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
            "nucleolus" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00343 SMART:SM00490 RGD:1311758 GO:GO:0005783 GO:GO:0005524
            GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
            GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 EMBL:CH474032 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
            HOVERGEN:HBG015893 KO:K13116 CTD:51428 HOGENOM:HOG000268792
            OrthoDB:EOG4CVG6K EMBL:BC166825 IPI:IPI00565869
            RefSeq:NP_001101516.1 UniGene:Rn.114971 SMR:B2RYL8
            Ensembl:ENSRNOT00000018114 GeneID:314336 KEGG:rno:314336
            UCSC:RGD:1311758 NextBio:667511 Genevestigator:B2RYL8
            Uniprot:B2RYL8
        Length = 622

 Score = 143 (55.4 bits), Expect = 6.7e-09, P = 6.7e-09
 Identities = 43/161 (26%), Positives = 75/161 (46%)

Query:    18 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVR 75
             ++++TP                  YL LDEAD++ ++G    ++ I    K     ++  
Sbjct:   316 MMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKG-QRQTL-- 372

Query:    76 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 135
              LFSAT+P  ++  A+S +   V + VGR   AS  + Q++ +   EE K++ L +   +
Sbjct:   373 -LFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYV-KEEAKMVYLLECLQK 430

Query:   136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             +  PPVLIF + K     ++  L    + A  IH    Q +
Sbjct:   431 T-PPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEE 470


>UNIPROTKB|Q48PB7 [details] [associations]
            symbol:PSPPH_0449 "ATP-dependent RNA helicase RhlE,
            putative" species:264730 "Pseudomonas syringae pv. phaseolicola
            1448A" [GO:0006139 "nucleobase-containing compound metabolic
            process" evidence=ISS] [GO:0008026 "ATP-dependent helicase
            activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            EMBL:CP000058 GenomeReviews:CP000058_GR InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
            RefSeq:YP_272752.1 ProteinModelPortal:Q48PB7 GeneID:3558820
            KEGG:psp:PSPPH_0449 PATRIC:19969930 OMA:DGDLMGF
            ProtClustDB:CLSK865855 Uniprot:Q48PB7
        Length = 625

 Score = 143 (55.4 bits), Expect = 6.7e-09, P = 6.7e-09
 Identities = 48/160 (30%), Positives = 71/160 (44%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
             D+L++ P              S VE LVLDEAD++ ++G     +  V K  +     R 
Sbjct:   131 DVLVACPGRLLDLAGQGSVDLSHVEILVLDEADRMLDMG----FVHDVKKVLARLPAKRQ 186

Query:    77 --LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
               LFSAT  + +  LA  ++H+  R+ V   NT  E I+Q+ VF  +   K   L     
Sbjct:   187 NLLFSATFSNDITSLAGKLLHNPERIEVTPPNTTVERIEQR-VFRLAANHKRSLLAHLIT 245

Query:   135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
                   VL+F ++K  A  L   L    + A  IH + SQ
Sbjct:   246 VGAWEQVLVFTRTKHGANRLAEYLDKHGLAAVAIHGNKSQ 285


>UNIPROTKB|J3KNN5 [details] [associations]
            symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
            GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            OMA:KDQEERS HGNC:HGNC:18674 ChiTaRS:DDX41 EMBL:AC145098
            Ensembl:ENST00000330503 Uniprot:J3KNN5
        Length = 640

 Score = 143 (55.4 bits), Expect = 6.9e-09, P = 6.9e-09
 Identities = 43/161 (26%), Positives = 75/161 (46%)

Query:    18 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVR 75
             ++++TP                  YL LDEAD++ ++G    ++ I    K     ++  
Sbjct:   334 MMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKG-QRQTL-- 390

Query:    76 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 135
              LFSAT+P  ++  A+S +   V + VGR   AS  + Q++ +   EE K++ L +   +
Sbjct:   391 -LFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYV-KEEAKMVYLLECLQK 448

Query:   136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             +  PPVLIF + K     ++  L    + A  IH    Q +
Sbjct:   449 T-PPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEE 488


>UNIPROTKB|J9NZF6 [details] [associations]
            symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
            GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AAEX03002959
            Ensembl:ENSCAFT00000042923 Uniprot:J9NZF6
        Length = 649

 Score = 143 (55.4 bits), Expect = 7.1e-09, P = 7.1e-09
 Identities = 43/161 (26%), Positives = 75/161 (46%)

Query:    18 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVR 75
             ++++TP                  YL LDEAD++ ++G    ++ I    K     ++  
Sbjct:   343 MMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKG-QRQTL-- 399

Query:    76 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 135
              LFSAT+P  ++  A+S +   V + VGR   AS  + Q++ +   EE K++ L +   +
Sbjct:   400 -LFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYV-KEEAKMVYLLECLQK 457

Query:   136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             +  PPVLIF + K     ++  L    + A  IH    Q +
Sbjct:   458 T-PPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEE 497


>ZFIN|ZDB-GENE-030131-1927 [details] [associations]
            symbol:ddx41 "DEAD (Asp-Glu-Ala-Asp) box
            polypeptide 41" species:7955 "Danio rerio" [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
            "zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
            PROSITE:PS51194 SMART:SM00343 SMART:SM00490
            ZFIN:ZDB-GENE-030131-1927 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
            EMBL:CABZ01072950 EMBL:CABZ01072951 EMBL:CABZ01072952
            IPI:IPI00961669 Ensembl:ENSDART00000061987 Bgee:F1QQ09
            Uniprot:F1QQ09
        Length = 473

 Score = 141 (54.7 bits), Expect = 7.1e-09, P = 7.1e-09
 Identities = 39/135 (28%), Positives = 66/135 (48%)

Query:    42 YLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVI 101
             YL LDEAD++ ++G   + I  +            LFSAT+P  ++  A+S +   + + 
Sbjct:   191 YLALDEADRMIDMG-FEEDIRTIFSYFKGQRQTL-LFSATMPKKIQNFAKSALVKPITIN 248

Query:   102 VGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFD 161
             VGR   AS  + Q++ +   EE K++ L +   ++  PPVLIF + K     ++  L   
Sbjct:   249 VGRAGAASLDVIQEVEYV-KEEAKMVYLLECLQKT-PPPVLIFAEKKADVDAIHEYLLLK 306

Query:   162 DIRAGVIHSDLSQTQ 176
              + A  IH    Q +
Sbjct:   307 GVEAVAIHGGKDQEE 321


>UNIPROTKB|F1PEA6 [details] [associations]
            symbol:DDX5 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003724 "RNA helicase
            activity" evidence=IEA] [GO:0003712 "transcription cofactor
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 OMA:IDAMSGY
            GeneTree:ENSGT00660000095174 EMBL:AAEX03006361
            Ensembl:ENSCAFT00000018595 Uniprot:F1PEA6
        Length = 671

 Score = 143 (55.4 bits), Expect = 7.4e-09, P = 7.4e-09
 Identities = 47/170 (27%), Positives = 77/170 (45%)

Query:    10 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
             DL +   +I I+TP               R  YLVLDEAD++ ++G     I  +V    
Sbjct:   270 DLER-GVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMG-FEPQIRKIVDQI- 326

Query:    70 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQ--KLVFAGSEEGKL 126
              P     ++SAT P  V +LA   + D + + +G    +A+ +I Q   +     ++ KL
Sbjct:   327 RPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKL 386

Query:   127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             + L +          ++FV++K R  EL  ++  D   A  IH D SQ +
Sbjct:   387 IRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQE 436


>UNIPROTKB|Q9NZE6 [details] [associations]
            symbol:EIF4A2 "BM-010" species:9606 "Homo sapiens"
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003743 "translation initiation factor activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:CH471052 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
            HOVERGEN:HBG107989 HSSP:P10081 EMBL:AC112907 UniGene:Hs.518475
            UniGene:Hs.599481 HGNC:HGNC:3284 ChiTaRS:EIF4A2 EMBL:AF208852
            IPI:IPI00030296 SMR:Q9NZE6 STRING:Q9NZE6 Ensembl:ENST00000356531
            UCSC:uc003fqv.3 Uniprot:Q9NZE6
        Length = 312

 Score = 137 (53.3 bits), Expect = 8.5e-09, P = 8.5e-09
 Identities = 41/159 (25%), Positives = 69/159 (43%)

Query:    18 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 77
             I++ TP                ++  VLDEAD++   G     I  + +   N SI   L
Sbjct:    60 IVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRG-FKDQIYEIFQKL-NTSIQVVL 117

Query:    78 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESL 137
              SAT+P  V E+ +  M D +R++V ++    E IKQ  +    EE KL  L   +    
Sbjct:   118 LSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLT 177

Query:   138 NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
                 +IF+ ++ +   L  ++   D     +H D+ Q +
Sbjct:   178 ITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKE 216


>UNIPROTKB|F1LP27 [details] [associations]
            symbol:Eif4a2 "Eukaryotic initiation factor 4A-II"
            species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 RGD:1309225 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            IPI:IPI00949972 Ensembl:ENSRNOT00000066369 ArrayExpress:F1LP27
            Uniprot:F1LP27
        Length = 312

 Score = 137 (53.3 bits), Expect = 8.5e-09, P = 8.5e-09
 Identities = 41/159 (25%), Positives = 69/159 (43%)

Query:    18 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 77
             I++ TP                ++  VLDEAD++   G     I  + +   N SI   L
Sbjct:    60 IVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRG-FKDQIYEIFQKL-NTSIQVVL 117

Query:    78 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESL 137
              SAT+P  V E+ +  M D +R++V ++    E IKQ  +    EE KL  L   +    
Sbjct:   118 LSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLT 177

Query:   138 NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
                 +IF+ ++ +   L  ++   D     +H D+ Q +
Sbjct:   178 ITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKE 216


>SGD|S000001767 [details] [associations]
            symbol:TIF1 "Translation initiation factor eIF4A"
            species:4932 "Saccharomyces cerevisiae" [GO:0003743 "translation
            initiation factor activity" evidence=IEA;IMP;IDA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0006413 "translational
            initiation" evidence=IEA;IMP;IDA] [GO:0006412 "translation"
            evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IMP;IDA] [GO:0005840 "ribosome" evidence=TAS] [GO:0016281
            "eukaryotic translation initiation factor 4F complex"
            evidence=IGI;ISS] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000001767
            SGD:S000003674 GO:GO:0005524 GO:GO:0005737 EMBL:BK006943
            EMBL:BK006944 GO:GO:0003743 EMBL:X87371 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 KO:K03854
            eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:U25436 KO:K03257
            OMA:IKMFILD OrthoDB:EOG4PG98F EMBL:X12813 EMBL:X12814 EMBL:X58099
            EMBL:Z49413 EMBL:Z28284 PIR:S05835 RefSeq:NP_012397.1
            RefSeq:NP_012985.3 RefSeq:NP_012987.3 PDB:1FUK PDB:1FUU PDB:1QDE
            PDB:1QVA PDB:2VSO PDB:2VSX PDBsum:1FUK PDBsum:1FUU PDBsum:1QDE
            PDBsum:1QVA PDBsum:2VSO PDBsum:2VSX ProteinModelPortal:P10081
            SMR:P10081 DIP:DIP-4571N IntAct:P10081 MINT:MINT-546056
            STRING:P10081 SWISS-2DPAGE:P10081 PaxDb:P10081 EnsemblFungi:YJL138C
            EnsemblFungi:YKR059W GeneID:853303 GeneID:853933 GeneID:853935
            KEGG:sce:YJL138C KEGG:sce:YKR059W KEGG:sce:YKR061W SABIO-RK:P10081
            EvolutionaryTrace:P10081 NextBio:973627 Genevestigator:P10081
            GermOnline:YJL138C GermOnline:YKR059W Uniprot:P10081
        Length = 395

 Score = 139 (54.0 bits), Expect = 8.5e-09, P = 8.5e-09
 Identities = 42/159 (26%), Positives = 69/159 (43%)

Query:    18 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 77
             I++ TP               +++  +LDEAD++   G   + I  +      P+    L
Sbjct:   142 IVVGTPGRVFDNIQRRRFRTDKIKMFILDEADEMLSSG-FKEQIYQIFTLLP-PTTQVVL 199

Query:    78 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESL 137
              SAT+P+ V E+    M + VR++V +     E IKQ  V    EE K   L   +    
Sbjct:   200 LSATMPNDVLEVTTKFMRNPVRILVKKDELTLEGIKQFYVNVEEEEYKYECLTDLYDSIS 259

Query:   138 NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
                 +IF  ++ + +EL  +L  D      I+SDL Q +
Sbjct:   260 VTQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQE 298


>SGD|S000003674 [details] [associations]
            symbol:TIF2 "Translation initiation factor eIF4A"
            species:4932 "Saccharomyces cerevisiae" [GO:0003743 "translation
            initiation factor activity" evidence=IEA;ISS;IDA;TAS] [GO:0005886
            "plasma membrane" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IEA;ISS;IDA] [GO:0006446 "regulation of translational
            initiation" evidence=ISS] [GO:0005840 "ribosome" evidence=TAS]
            [GO:0016281 "eukaryotic translation initiation factor 4F complex"
            evidence=IGI;ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IMP] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0006412 "translation"
            evidence=IEA] [GO:0006413 "translational initiation"
            evidence=IEA;TAS] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 SGD:S000001767 SGD:S000003674 GO:GO:0005524
            GO:GO:0005737 EMBL:BK006943 EMBL:BK006944 GO:GO:0003743 EMBL:X87371
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            KO:K03854 eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:U25436 KO:K03257
            OMA:IKMFILD OrthoDB:EOG4PG98F EMBL:X12813 EMBL:X12814 EMBL:X58099
            EMBL:Z49413 EMBL:Z28284 PIR:S05835 RefSeq:NP_012397.1
            RefSeq:NP_012985.3 RefSeq:NP_012987.3 PDB:1FUK PDB:1FUU PDB:1QDE
            PDB:1QVA PDB:2VSO PDB:2VSX PDBsum:1FUK PDBsum:1FUU PDBsum:1QDE
            PDBsum:1QVA PDBsum:2VSO PDBsum:2VSX ProteinModelPortal:P10081
            SMR:P10081 DIP:DIP-4571N IntAct:P10081 MINT:MINT-546056
            STRING:P10081 SWISS-2DPAGE:P10081 PaxDb:P10081 EnsemblFungi:YJL138C
            EnsemblFungi:YKR059W GeneID:853303 GeneID:853933 GeneID:853935
            KEGG:sce:YJL138C KEGG:sce:YKR059W KEGG:sce:YKR061W SABIO-RK:P10081
            EvolutionaryTrace:P10081 NextBio:973627 Genevestigator:P10081
            GermOnline:YJL138C GermOnline:YKR059W Uniprot:P10081
        Length = 395

 Score = 139 (54.0 bits), Expect = 8.5e-09, P = 8.5e-09
 Identities = 42/159 (26%), Positives = 69/159 (43%)

Query:    18 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 77
             I++ TP               +++  +LDEAD++   G   + I  +      P+    L
Sbjct:   142 IVVGTPGRVFDNIQRRRFRTDKIKMFILDEADEMLSSG-FKEQIYQIFTLLP-PTTQVVL 199

Query:    78 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESL 137
              SAT+P+ V E+    M + VR++V +     E IKQ  V    EE K   L   +    
Sbjct:   200 LSATMPNDVLEVTTKFMRNPVRILVKKDELTLEGIKQFYVNVEEEEYKYECLTDLYDSIS 259

Query:   138 NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
                 +IF  ++ + +EL  +L  D      I+SDL Q +
Sbjct:   260 VTQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQE 298


>TIGR_CMR|CPS_3401 [details] [associations]
            symbol:CPS_3401 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 RefSeq:YP_270076.1 ProteinModelPortal:Q47YP4
            STRING:Q47YP4 GeneID:3521057 KEGG:cps:CPS_3401 PATRIC:21469753
            OMA:HLIKEHQ ProtClustDB:CLSK907013
            BioCyc:CPSY167879:GI48-3430-MONOMER Uniprot:Q47YP4
        Length = 432

 Score = 139 (54.0 bits), Expect = 1.0e-08, P = 1.0e-08
 Identities = 43/160 (26%), Positives = 74/160 (46%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
             DIL++TP               +V+ LVLDEAD++  +G   + +  ++ A +       
Sbjct:   139 DILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLG-FTEELTALL-ALTPKKKQTL 196

Query:    77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
             LFSAT P+ V  L + ++++ + +   +  +A  S   + VF  ++  K   L     + 
Sbjct:   197 LFSATFPEQVTTLTQELLNNPIEI---QLQSADASTLVQRVFTVNKGEKTAVLAHLIQQE 253

Query:   137 LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
                  LIFV +K   + L  +LA   I A V H D  Q++
Sbjct:   254 QWRQALIFVNAKHHCEHLAEKLAKRGITAAVFHGDKGQSE 293


>MGI|MGI:102670 [details] [associations]
            symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=ISO;IDA] [GO:0007141 "male meiosis I" evidence=IMP]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0007283 "spermatogenesis" evidence=IMP] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0030317 "sperm motility"
            evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
            [GO:0032880 "regulation of protein localization" evidence=IMP]
            [GO:0033391 "chromatoid body" evidence=ISO;IDA] [GO:0044464 "cell
            part" evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IDA] [GO:0071546 "pi-body" evidence=IDA] [GO:0071547
            "piP-body" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 MGI:MGI:102670 GO:GO:0007275
            GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0032880
            GO:GO:0007283 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
            HOVERGEN:HBG015893 CTD:54514 KO:K13982 GO:GO:0071547 GO:GO:0000237
            EMBL:AK014844 EMBL:D14859 IPI:IPI00121394 RefSeq:NP_034159.1
            UniGene:Mm.12818 ProteinModelPortal:Q61496 SMR:Q61496 STRING:Q61496
            PhosphoSite:Q61496 REPRODUCTION-2DPAGE:IPI00121394
            REPRODUCTION-2DPAGE:Q61496 PaxDb:Q61496 PRIDE:Q61496
            Ensembl:ENSMUST00000075748 GeneID:13206 KEGG:mmu:13206
            UCSC:uc007rwm.2 ChiTaRS:DDX4 NextBio:283368 Bgee:Q61496
            CleanEx:MM_DDX4 Genevestigator:Q61496 GermOnline:ENSMUSG00000021758
            Uniprot:Q61496
        Length = 702

 Score = 142 (55.0 bits), Expect = 1.0e-08, P = 1.0e-08
 Identities = 44/167 (26%), Positives = 81/167 (48%)

Query:    16 CDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
             C+IL +TP               +V+YLVLDEAD++ ++G     +  ++     PS  +
Sbjct:   389 CNILCATPGRLMDIIGKEKIGLKQVKYLVLDEADRMLDMG-FGPEMKKLISCPGMPSKEQ 447

Query:    76 S---LFSATLPDFVEELARSIMHDA-VRVIVGRKNTASESIKQKLVFAG--SEEGKLLAL 129
                 LFSAT P+ ++ LA   +  + + V VG+   A   ++Q ++  G  S+  KL+ +
Sbjct:   448 RQTLLFSATFPEEIQRLAGDFLKSSYLFVAVGQVGGACRDVQQTILQVGQYSKREKLVEI 507

Query:   130 RQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
              ++  +      ++FV++K +A  +   L  + I    IH D  Q +
Sbjct:   508 LRNIGDERT---MVFVETKKKADFIATFLCQEKISTTSIHGDREQRE 551


>MGI|MGI:1919240 [details] [associations]
            symbol:Ddx54 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 54"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003714 "transcription corepressor activity" evidence=ISO]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent
            RNA helicase activity" evidence=ISO] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005102 "receptor binding"
            evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0006396 "RNA processing" evidence=ISO]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0016070 "RNA metabolic process" evidence=ISO] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0016818 "hydrolase activity,
            acting on acid anhydrides, in phosphorus-containing anhydrides"
            evidence=IEA] [GO:0030331 "estrogen receptor binding" evidence=ISO]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271 Pfam:PF08147
            ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            MGI:MGI:1919240 GO:GO:0005524 GO:GO:0003714 GO:GO:0005730
            GO:GO:0006355 GO:GO:0006351 GO:GO:0003723 GO:GO:0006396
            GO:GO:0030331 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            KO:K14808 HOGENOM:HOG000246455 OMA:FYIPYRP
            GeneTree:ENSGT00550000075100 CTD:79039 HOVERGEN:HBG051333
            EMBL:AF319547 EMBL:BC043699 IPI:IPI00875042 RefSeq:NP_082317.1
            UniGene:Mm.24495 ProteinModelPortal:Q8K4L0 SMR:Q8K4L0 STRING:Q8K4L0
            PhosphoSite:Q8K4L0 PaxDb:Q8K4L0 PRIDE:Q8K4L0
            Ensembl:ENSMUST00000031598 GeneID:71990 KEGG:mmu:71990
            UCSC:uc008zhq.1 NextBio:335150 Bgee:Q8K4L0 CleanEx:MM_DDX54
            Genevestigator:Q8K4L0 Uniprot:Q8K4L0
        Length = 874

 Score = 143 (55.4 bits), Expect = 1.1e-08, P = 1.1e-08
 Identities = 49/162 (30%), Positives = 77/162 (47%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVV-KACSNPSIVR 75
             DI+I+TP                VEY+V DEAD+LFE+G   + +  ++ +       V 
Sbjct:   217 DIIIATPGRLVHVAVEMNLKLQSVEYVVFDEADRLFEMG-FAEQLQEIIGRLPGGHQTV- 274

Query:    76 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQK--LVFAGSEEGKLLALRQSF 133
              LFSATLP  + E AR+ + + V + +   +  +E +K    LV   ++   LL L Q+ 
Sbjct:   275 -LFSATLPKLLVEFARAGLTEPVLIRLDVDSKLNEQLKTSFLLVREDTKAAVLLYLLQNV 333

Query:   134 AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
                 +  V +FV +K  A+ L   L    +    I+S L QT
Sbjct:   334 VRPQDQTV-VFVATKHHAEYLTELLMGQGVSCAHIYSALDQT 374


>GENEDB_PFALCIPARUM|PFL1310c [details] [associations]
            symbol:PFL1310c "ATP-dependent RNA helicase,
            putative" species:5833 "Plasmodium falciparum" [GO:0016070 "RNA
            metabolic process" evidence=ISS] [GO:0003723 "RNA binding"
            evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            EMBL:AE014188 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
            HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_001350668.1
            ProteinModelPortal:Q8I5E7 PRIDE:Q8I5E7
            EnsemblProtists:PFL1310c:mRNA GeneID:811314 KEGG:pfa:PFL1310c
            EuPathDB:PlasmoDB:PF3D7_1227100 ProtClustDB:CLSZ2500975
            Uniprot:Q8I5E7
        Length = 742

 Score = 142 (55.0 bits), Expect = 1.1e-08, P = 1.1e-08
 Identities = 46/170 (27%), Positives = 85/170 (50%)

Query:    13 KFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS-NP 71
             K   DI+++TP               +  Y+V+DEAD+L ++G   K +  ++   + N 
Sbjct:   475 KKGADIIVATPGRLLDFLENGNINLLKCIYVVIDEADRLLDMG-FEKQLRKIMTQVNKNK 533

Query:    72 SIVRSLFSATLPDFVEELARSIM-HDAVRVIVGRKN-TASESIKQKLVFAGSEE--GKLL 127
              ++    +AT P+ V +LA     +D V++ +G+   TA+++I+Q ++ + S +   KLL
Sbjct:   534 QLL--FLTATWPEQVRKLAYDFCSYDPVKIQIGKNELTANKNIEQNVIISSSIDMKKKLL 591

Query:   128 A-LRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
               L++++    N  +LIF  +K     L  EL +    A  IH D  Q +
Sbjct:   592 DWLKENYE---NNKILIFCDTKRNCDNLCKELRYHQYNALSIHGDKQQRE 638


>UNIPROTKB|A4QVP2 [details] [associations]
            symbol:TIF1 "ATP-dependent RNA helicase eIF4A"
            species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
            "cellular_component" evidence=ND] [GO:0043581 "mycelium
            development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003743 EMBL:CM001231 GO:GO:0043581 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 KO:K03257 OrthoDB:EOG4PG98F
            RefSeq:XP_003711015.1 ProteinModelPortal:A4QVP2 SMR:A4QVP2
            EnsemblFungi:MGG_04400T0 GeneID:2677872 KEGG:mgr:MGG_04400
            Uniprot:A4QVP2
        Length = 396

 Score = 138 (53.6 bits), Expect = 1.1e-08, P = 1.1e-08
 Identities = 41/159 (25%), Positives = 66/159 (41%)

Query:    18 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 77
             +++ TP                ++  VLDEAD++   G   + I  + +     + V  L
Sbjct:   144 VVVGTPGRVHDMIQRRFLKTDGMKMFVLDEADEMLSRG-FTEQIYDIFQLLPQSTQV-VL 201

Query:    78 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESL 137
              SAT+P  V E+    M D VR++V +     E IKQ  +    EE KL  L   +    
Sbjct:   202 LSATMPQDVLEVTTKFMRDPVRILVKKDELTLEGIKQFYIAVEKEEWKLDTLSDLYETVT 261

Query:   138 NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
                 +IF  ++ +   L  +L   D     +H D+ Q Q
Sbjct:   262 ITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQ 300


>RGD|1562539 [details] [associations]
            symbol:Ddx54 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 54"
            species:10116 "Rattus norvegicus" [GO:0003714 "transcription
            corepressor activity" evidence=ISO] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=ISO] [GO:0005102 "receptor binding" evidence=ISO]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0006396
            "RNA processing" evidence=ISO] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0016070 "RNA metabolic process"
            evidence=ISO] [GO:0030331 "estrogen receptor binding" evidence=ISO]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271 Pfam:PF08147
            ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            RGD:1562539 GO:GO:0005524 GO:GO:0003714 GO:GO:0005730 GO:GO:0003723
            GO:GO:0006396 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00550000075100 IPI:IPI00193685
            Ensembl:ENSRNOT00000001859 UCSC:RGD:1562539 OrthoDB:EOG469QTB
            Uniprot:D3ZHY6
        Length = 906

 Score = 143 (55.4 bits), Expect = 1.1e-08, P = 1.1e-08
 Identities = 49/162 (30%), Positives = 77/162 (47%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVV-KACSNPSIVR 75
             DI+I+TP                VEY+V DEAD+LFE+G   + +  ++ +       V 
Sbjct:   217 DIIIATPGRLVHVAVEMNLKLQSVEYVVFDEADRLFEMG-FAEQLQEIIGRLPGGHQTV- 274

Query:    76 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQK--LVFAGSEEGKLLALRQSF 133
              LFSATLP  + E AR+ + + V + +   +  +E +K    LV   ++   LL L Q+ 
Sbjct:   275 -LFSATLPKLLVEFARAGLTEPVLIRLDVDSKLNEQLKTSFFLVREDTKTAVLLYLLQNV 333

Query:   134 AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
                 +  V +FV +K  A+ L   L    +    I+S L QT
Sbjct:   334 VRPQDQNV-VFVATKHHAEYLTELLTGQGVSCAHIYSALDQT 374


>UNIPROTKB|Q0C4B9 [details] [associations]
            symbol:HNE_0695 "Putative ATP-dependent RNA helicase RhlE"
            species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
            "nucleobase-containing compound metabolic process" evidence=ISS]
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
            GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
            RefSeq:YP_759424.1 ProteinModelPortal:Q0C4B9 STRING:Q0C4B9
            GeneID:4287361 KEGG:hne:HNE_0695 PATRIC:32214196 OMA:LPMITIL
            BioCyc:HNEP228405:GI69-738-MONOMER Uniprot:Q0C4B9
        Length = 536

 Score = 140 (54.3 bits), Expect = 1.1e-08, P = 1.1e-08
 Identities = 46/163 (28%), Positives = 73/163 (44%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
             D+LI+TP                VE L++DEAD++ ++G     I  + K C+     R 
Sbjct:   127 DVLIATPGRLMDQFDRGKLLMMGVETLIIDEADRMLDMG----FIPDIEKICAKLPANRQ 182

Query:    77 --LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL--LALRQS 132
               LFSAT P  ++ LA++   D  ++ V R    +E+I Q +V   + +GK    ALR+ 
Sbjct:   183 TLLFSATFPTDIQRLAKTFQKDPKKIEVTRPAQTAETISQFVVKLPTNDGKARRTALRRV 242

Query:   133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
                +     ++F   K     +   L      A  IH DL Q+
Sbjct:   243 IEATNVKNGIVFCNRKVEVDIVAASLTKHGHDAAPIHGDLPQS 285


>UNIPROTKB|E7EQG2 [details] [associations]
            symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 EMBL:AC112907 HGNC:HGNC:3284 ChiTaRS:EIF4A2
            IPI:IPI00924536 ProteinModelPortal:E7EQG2 SMR:E7EQG2 PRIDE:E7EQG2
            Ensembl:ENST00000425053 ArrayExpress:E7EQG2 Bgee:E7EQG2
            Uniprot:E7EQG2
        Length = 362

 Score = 137 (53.3 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 41/159 (25%), Positives = 69/159 (43%)

Query:    18 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 77
             I++ TP                ++  VLDEAD++   G     I  + +   N SI   L
Sbjct:   155 IVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRG-FKDQIYEIFQKL-NTSIQVVL 212

Query:    78 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESL 137
              SAT+P  V E+ +  M D +R++V ++    E IKQ  +    EE KL  L   +    
Sbjct:   213 LSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLT 272

Query:   138 NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
                 +IF+ ++ +   L  ++   D     +H D+ Q +
Sbjct:   273 ITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKE 311


>WB|WBGene00010260 [details] [associations]
            symbol:F58E10.3 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
            growth rate" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
            [GO:0002119 "nematode larval development" evidence=IMP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
            GO:GO:0040010 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
            GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:Z81555 PIR:T22917
            RefSeq:NP_001041134.1 ProteinModelPortal:Q9XUW5 SMR:Q9XUW5
            STRING:Q9XUW5 PaxDb:Q9XUW5 PRIDE:Q9XUW5 EnsemblMetazoa:F58E10.3a.1
            EnsemblMetazoa:F58E10.3a.2 EnsemblMetazoa:F58E10.3a.3
            EnsemblMetazoa:F58E10.3a.4 EnsemblMetazoa:F58E10.3a.5 GeneID:179897
            KEGG:cel:CELE_F58E10.3 UCSC:F58E10.3a.1 CTD:179897
            WormBase:F58E10.3a InParanoid:Q9XUW5 OMA:YVLQEIT NextBio:907314
            ArrayExpress:Q9XUW5 Uniprot:Q9XUW5
        Length = 561

 Score = 140 (54.3 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 47/171 (27%), Positives = 76/171 (44%)

Query:     7 RSTDLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVK 66
             ++ DL +   DI+++TP               +  YLVLDEAD++ ++G     I  ++ 
Sbjct:   245 QARDLER-GVDIVVATPGRLLDFLDNGTTNMKKCSYLVLDEADRMLDMG-FEPQIKKIIG 302

Query:    67 ACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQ--KLVFAGSEE 123
                 P     +FSAT P  V  LA     DA  + VG     A+ +I Q   ++   +++
Sbjct:   303 QI-RPDRQTLMFSATWPKEVRALASDFQKDAAFLNVGSLELAANHNITQVVDILEEHAKQ 361

Query:   124 GKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
              KL+ L            +IFV++K +A EL   +  D      IH D +Q
Sbjct:   362 AKLMELLNHIMNQKECKTIIFVETKRKADELTRAMRRDGWPTLCIHGDKNQ 412


>FB|FBgn0263231 [details] [associations]
            symbol:bel "belle" species:7227 "Drosophila melanogaster"
            [GO:0007286 "spermatid development" evidence=IMP] [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS;IMP] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0007283
            "spermatogenesis" evidence=IMP] [GO:0002168 "instar larval
            development" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
            [GO:0016442 "RNA-induced silencing complex" evidence=IDA]
            [GO:0016246 "RNA interference" evidence=IMP] [GO:0005811 "lipid
            particle" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0005875 "microtubule associated complex" evidence=IDA]
            [GO:0043025 "neuronal cell body" evidence=IDA] [GO:0010468
            "regulation of gene expression" evidence=IMP] [GO:0000070 "mitotic
            sister chromatid segregation" evidence=IMP] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:AE014297
            GO:GO:0005524 GO:GO:0005875 GO:GO:0016246 GO:GO:0007286
            GO:GO:0005811 GO:GO:0043025 GO:GO:0048477 GO:GO:0003723
            GO:GO:0000070 GO:GO:0016442 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 GO:GO:0002168 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
            GeneTree:ENSGT00620000087942 KO:K11594 HSSP:P09052 EMBL:AY089613
            RefSeq:NP_536783.1 UniGene:Dm.7823 ProteinModelPortal:Q9VHP0
            SMR:Q9VHP0 IntAct:Q9VHP0 STRING:Q9VHP0 PaxDb:Q9VHP0 PRIDE:Q9VHP0
            EnsemblMetazoa:FBtr0081888 GeneID:45826 KEGG:dme:Dmel_CG9748
            UCSC:CG9748-RA CTD:100035747 FlyBase:FBgn0263231 InParanoid:Q9VHP0
            OMA:TILWVYE OrthoDB:EOG4DNCKG PhylomeDB:Q9VHP0 GenomeRNAi:45826
            NextBio:838377 Bgee:Q9VHP0 Uniprot:Q9VHP0
        Length = 798

 Score = 142 (55.0 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 46/170 (27%), Positives = 80/170 (47%)

Query:    16 CDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
             C ++++TP                + +LVLDEAD++ ++G     I  +V+  + P   +
Sbjct:   429 CHLIVATPGRLEDMITRGKVGLENIRFLVLDEADRMLDMG-FEPQIRRIVEQLNMPPTGQ 487

Query:    76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKL--VFAGSEEGKLLALR 130
                 +FSAT P  ++ELA   + + + + VGR  + SE+I Q +  V+   +   LL L 
Sbjct:   488 RQTLMFSATFPKQIQELASDFLSNYIFLAVGRVGSTSENITQTILWVYEPDKRSYLLDLL 547

Query:   131 QSFAE----SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
              S  +    + +   LIFV++K  A  L   L   +     IH D +Q +
Sbjct:   548 SSIRDGPEYTKDSLTLIFVETKKGADSLEEFLYQCNHPVTSIHGDRTQKE 597


>UNIPROTKB|D4ADV9 [details] [associations]
            symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
            species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 IPI:IPI00782021 Ensembl:ENSRNOT00000060732
            Uniprot:D4ADV9
        Length = 674

 Score = 141 (54.7 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 44/167 (26%), Positives = 81/167 (48%)

Query:    16 CDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
             C+IL +TP               +V+YLVLDEAD++ ++G     +  ++     PS  +
Sbjct:   390 CNILCATPGRLMDIIGKEKIGLKQVKYLVLDEADRMLDMG-FGPEMKKLISCPGMPSKEQ 448

Query:    76 S---LFSATLPDFVEELARSIMH-DAVRVIVGRKNTASESIKQKLVFAG--SEEGKLLAL 129
                 LFSAT P+ ++ LA   +  + + V VG+   A   ++Q ++  G  S+  KL+ +
Sbjct:   449 RQTLLFSATFPEEIQRLAGEFLKSNYLFVAVGQVGGACRDVQQSILQVGQYSKREKLVEI 508

Query:   130 RQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
              ++  +      ++FV++K +A  +   L  + I    IH D  Q +
Sbjct:   509 LRNIGDERT---MVFVETKKKADFIATFLCQEKISTTSIHGDREQRE 552


>UNIPROTKB|Q8ECL2 [details] [associations]
            symbol:SO_3125 "ATP-dependent RNA helicase DEAD box family"
            species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
            ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
            GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
            Uniprot:Q8ECL2
        Length = 427

 Score = 138 (53.6 bits), Expect = 1.3e-08, P = 1.3e-08
 Identities = 41/158 (25%), Positives = 72/158 (45%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
             D+L++TP              ++V   VLDEAD++  +G   + ++ V+ A         
Sbjct:   137 DVLVATPGRLLDLLASNALKLTQVSAFVLDEADRMLSLG-FTEELEQVLAALPRQKQTL- 194

Query:    77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
             LFSAT P+ V  L   ++H  +   +  ++    +I+Q+++    E+ K   L     + 
Sbjct:   195 LFSATFPEEVRALTTKLLHQPLEYHL--QSEQESTIEQRVITVNREQ-KTALLAHLIKQH 251

Query:   137 LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
                  LIFV +K+    L  +L+   I A V H D +Q
Sbjct:   252 QWSQALIFVSAKNTCNHLAQKLSKRGISAEVFHGDKAQ 289


>TIGR_CMR|SO_3125 [details] [associations]
            symbol:SO_3125 "ATP-dependent RNA helicase, DEAD box
            family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
            ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
            GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
            Uniprot:Q8ECL2
        Length = 427

 Score = 138 (53.6 bits), Expect = 1.3e-08, P = 1.3e-08
 Identities = 41/158 (25%), Positives = 72/158 (45%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
             D+L++TP              ++V   VLDEAD++  +G   + ++ V+ A         
Sbjct:   137 DVLVATPGRLLDLLASNALKLTQVSAFVLDEADRMLSLG-FTEELEQVLAALPRQKQTL- 194

Query:    77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
             LFSAT P+ V  L   ++H  +   +  ++    +I+Q+++    E+ K   L     + 
Sbjct:   195 LFSATFPEEVRALTTKLLHQPLEYHL--QSEQESTIEQRVITVNREQ-KTALLAHLIKQH 251

Query:   137 LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
                  LIFV +K+    L  +L+   I A V H D +Q
Sbjct:   252 QWSQALIFVSAKNTCNHLAQKLSKRGISAEVFHGDKAQ 289


>SGD|S000000441 [details] [associations]
            symbol:PRP5 "RNA helicase in the DEAD-box family"
            species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
            evidence=IEA;IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0008380 "RNA splicing" evidence=IEA] [GO:0000348 "mRNA branch
            site recognition" evidence=TAS] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
            evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 SGD:S000000441 GO:GO:0005524
            GO:GO:0005681 EMBL:BK006936 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008186
            GeneTree:ENSGT00610000086076 KO:K12811 HOGENOM:HOG000007229
            GO:GO:0000348 OMA:SLVIIYN OrthoDB:EOG40CMR1 EMBL:M33191 EMBL:Z36106
            EMBL:AY692817 PIR:A35791 RefSeq:NP_009796.1
            ProteinModelPortal:P21372 SMR:P21372 DIP:DIP-88N IntAct:P21372
            MINT:MINT-403988 STRING:P21372 PaxDb:P21372 EnsemblFungi:YBR237W
            GeneID:852539 KEGG:sce:YBR237W CYGD:YBR237w NextBio:971604
            Genevestigator:P21372 GermOnline:YBR237W Uniprot:P21372
        Length = 849

 Score = 142 (55.0 bits), Expect = 1.3e-08, P = 1.3e-08
 Identities = 40/138 (28%), Positives = 67/138 (48%)

Query:     1 MKKELVRSTDLSKFSCDILISTPXXXXXXXXXXXX---XXSRVEYLVLDEADKLFEVGNL 57
             MKK++   TDL +   +I+++TP                  R+ ++V+DEAD+LF++G  
Sbjct:   371 MKKQI---TDLKR-GTEIVVATPGRFIDILTLNDGKLLSTKRITFVVMDEADRLFDLG-F 425

Query:    58 LKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLV 117
                I  ++K    P     LFSAT P+ +   A  ++H  + + +  K   +E++KQK  
Sbjct:   426 EPQITQIMKTV-RPDKQCVLFSATFPNKLRSFAVRVLHSPISITINSKGMVNENVKQKFR 484

Query:   118 FAGSEEGKLLALRQSFAE 135
                SE+ K   L Q   E
Sbjct:   485 ICHSEDEKFDNLVQLIHE 502


>ZFIN|ZDB-GENE-021220-2 [details] [associations]
            symbol:ddx54 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
            54" species:7955 "Danio rerio" [GO:0016818 "hydrolase activity,
            acting on acid anhydrides, in phosphorus-containing anhydrides"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271 Pfam:PF08147
            ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            ZFIN:ZDB-GENE-021220-2 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K14808
            HOGENOM:HOG000246455 GeneTree:ENSGT00550000075100 CTD:79039
            HOVERGEN:HBG051333 OrthoDB:EOG469QTB EMBL:CU929062 EMBL:FP236447
            EMBL:AY099535 IPI:IPI00481864 RefSeq:NP_775375.1 UniGene:Dr.18320
            STRING:Q8JGR2 Ensembl:ENSDART00000026416 Ensembl:ENSDART00000128587
            GeneID:286777 KEGG:dre:286777 NextBio:20806437 Uniprot:Q8JGR2
        Length = 862

 Score = 142 (55.0 bits), Expect = 1.3e-08, P = 1.3e-08
 Identities = 46/162 (28%), Positives = 75/162 (46%)

Query:    17 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
             DI+I TP                VEY+V DEAD+LFE+G   + +  +++    P   ++
Sbjct:   200 DIIIGTPGRLMHVIQEMNLKLQSVEYVVFDEADRLFEMG-FAEQLQEIIRRL--PDARQT 256

Query:    77 L-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 135
             L FSATLP  + E AR+ + + V + +      SE +K    F+   + K   L      
Sbjct:   257 LLFSATLPKLIVEFARAGLTEPVLIRLDVDTKLSEQLKLSF-FSLRLDDKPALLLHLLRN 315

Query:   136 SLNPP--VLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
              + P    ++FV +K   + L   L+ + +    I+S L QT
Sbjct:   316 VVKPQEQTVVFVATKHHVEYLKELLSAEGVDCSCIYSALDQT 357


>TIGR_CMR|GSU_0522 [details] [associations]
            symbol:GSU_0522 "ATP-dependent RNA helicase RhlB"
            species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006401
            "RNA catabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732
            RefSeq:NP_951580.1 ProteinModelPortal:Q74FT4 GeneID:2685920
            KEGG:gsu:GSU0522 PATRIC:22023799 OMA:LAYEFMN ProtClustDB:CLSK827899
            BioCyc:GSUL243231:GH27-482-MONOMER Uniprot:Q74FT4
        Length = 443

 Score = 138 (53.6 bits), Expect = 1.3e-08, P = 1.3e-08
 Identities = 47/173 (27%), Positives = 79/173 (45%)

Query:     4 ELVRSTDLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDP 63
             + ++  +  K   D+++ TP                +E LV+DEAD++F++G  +  +  
Sbjct:   113 DYMKQKNALKEGADVVVGTPGRLIDYLKQKVYSLKEIEMLVIDEADRMFDMG-FIADLRF 171

Query:    64 VVKACSNPSIVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGS 121
             +++    P   R   +FSATL   V ELA   M+   +V V  +   +E ++Q L   G 
Sbjct:   172 ILRRLP-PYDKRQNLMFSATLNQRVMELAYEFMNVPEKVAVTPEQMTAERVEQVLYHVGR 230

Query:   122 EEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
             +E   L L     E +    +IFV +K  A+ L   L  +D    VI  D+ Q
Sbjct:   231 KEKFPLLLGLLRKEGMER-TMIFVNTKREAEFLDERLNANDFPCRVISGDVEQ 282


>GENEDB_PFALCIPARUM|MAL8P1.19 [details] [associations]
            symbol:MAL8P1.19 "RNA helicase, putative"
            species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 GO:GO:0020011
            EMBL:AL844507 RefSeq:XP_001349256.1 ProteinModelPortal:Q8IBA2
            IntAct:Q8IBA2 MINT:MINT-1608586 EnsemblProtists:MAL8P1.19:mRNA
            GeneID:2655364 KEGG:pfa:MAL8P1.19 EuPathDB:PlasmoDB:PF3D7_0827000
            HOGENOM:HOG000282591 Uniprot:Q8IBA2
        Length = 1289

 Score = 134 (52.2 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
 Identities = 36/126 (28%), Positives = 61/126 (48%)

Query:     5 LVRSTDLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPV 64
             +++  D+   + DIL+ TP               +VE L++DEAD+L E+ N    ++ +
Sbjct:   271 IIKQFDILNQNLDILLCTPGRLSFLLQETKLSLEKVEILIIDEADRLLEL-NYYNDMNVI 329

Query:    65 VKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEG 124
              K+ +N S    L SATLP  VE   +  +++   + +   NT +E +    +F  S E 
Sbjct:   330 YKSLNNTSKQTILVSATLPTNVENYFKLKLNNPDVLFLTSDNTINEKVHLHFLFCRSYEK 389

Query:   125 KLLALR 130
               L LR
Sbjct:   390 YALLLR 395

 Score = 36 (17.7 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
 Identities = 7/14 (50%), Positives = 10/14 (71%)

Query:     2 KKELVRSTDLSKFS 15
             KKE V  +DL+ +S
Sbjct:   102 KKEKVEESDLNNYS 115


>UNIPROTKB|Q8IBA2 [details] [associations]
            symbol:MAL8P1.19 "RNA helicase, putative" species:36329
            "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HSSP:Q58083 GO:GO:0020011 EMBL:AL844507
            RefSeq:XP_001349256.1 ProteinModelPortal:Q8IBA2 IntAct:Q8IBA2
            MINT:MINT-1608586 EnsemblProtists:MAL8P1.19:mRNA GeneID:2655364
            KEGG:pfa:MAL8P1.19 EuPathDB:PlasmoDB:PF3D7_0827000
            HOGENOM:HOG000282591 Uniprot:Q8IBA2
        Length = 1289

 Score = 134 (52.2 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
 Identities = 36/126 (28%), Positives = 61/126 (48%)

Query:     5 LVRSTDLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPV 64
             +++  D+   + DIL+ TP               +VE L++DEAD+L E+ N    ++ +
Sbjct:   271 IIKQFDILNQNLDILLCTPGRLSFLLQETKLSLEKVEILIIDEADRLLEL-NYYNDMNVI 329

Query:    65 VKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEG 124
              K+ +N S    L SATLP  VE   +  +++   + +   NT +E +    +F  S E 
Sbjct:   330 YKSLNNTSKQTILVSATLPTNVENYFKLKLNNPDVLFLTSDNTINEKVHLHFLFCRSYEK 389

Query:   125 KLLALR 130
               L LR
Sbjct:   390 YALLLR 395

 Score = 36 (17.7 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
 Identities = 7/14 (50%), Positives = 10/14 (71%)

Query:     2 KKELVRSTDLSKFS 15
             KKE V  +DL+ +S
Sbjct:   102 KKEKVEESDLNNYS 115


>SGD|S000002428 [details] [associations]
            symbol:FAL1 "Nucleolar protein required for maturation of 18S
            rRNA" species:4932 "Saccharomyces cerevisiae" [GO:0005730
            "nucleolus" evidence=IEA;IDA] [GO:0042254 "ribosome biogenesis"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
            rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0097078 "FAl1-SGD1 complex" evidence=IPI] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
            processing" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 SGD:S000002428 GO:GO:0005524
            GO:GO:0005730 EMBL:BK006938 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 EMBL:X95966
            EMBL:Z49770 GeneTree:ENSGT00680000100003 GO:GO:0000462 KO:K13025
            OrthoDB:EOG4HTD1W EMBL:Z74317 EMBL:AY723767 PIR:S54644
            RefSeq:NP_010304.3 RefSeq:NP_010309.3 ProteinModelPortal:Q12099
            SMR:Q12099 DIP:DIP-4516N IntAct:Q12099 MINT:MINT-503789
            STRING:Q12099 PaxDb:Q12099 PeptideAtlas:Q12099 EnsemblFungi:YDR021W
            GeneID:851584 GeneID:851590 KEGG:sce:YDR021W KEGG:sce:YDR026C
            CYGD:YDR021w KO:K09424 OMA:IFGKQPF NextBio:969055
            Genevestigator:Q12099 GermOnline:YDR021W GO:GO:0097078
            Uniprot:Q12099
        Length = 399

 Score = 137 (53.3 bits), Expect = 1.4e-08, P = 1.4e-08
 Identities = 45/168 (26%), Positives = 70/168 (41%)

Query:    11 LSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFE--VGNLLKHIDPVVKAC 68
             + K  C  +  TP                V+ LVLDEAD+L    +G   +  D   K  
Sbjct:   138 MQKHGCQAVSGTPGRVLDMIKKQMLQTRNVQMLVLDEADELLSETLGFKQQIYDIFAKLP 197

Query:    69 SNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLA 128
              N  +V  + SAT+   + E+ R  M+D V+++V R   + E IKQ +V    EE K   
Sbjct:   198 KNCQVV--VVSATMNKDILEVTRKFMNDPVKILVKRDEISLEGIKQYVVNVDKEEWKFDT 255

Query:   129 LRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             L   +        +IF  +K +   L   L   +     +H D+ Q +
Sbjct:   256 LCDIYDSLTITQCVIFCNTKKKVDWLSQRLIQSNFAVVSMHGDMKQEE 303


>ZFIN|ZDB-GENE-031030-2 [details] [associations]
            symbol:eif4a1a "eukaryotic translation initiation
            factor 4A, isoform 1A" species:7955 "Danio rerio" [GO:0004386
            "helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0003743 "translation
            initiation factor activity" evidence=IEA] [GO:0006413
            "translational initiation" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 ZFIN:ZDB-GENE-031030-2 GO:GO:0005524 GO:GO:0003743
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG107989 HSSP:P10081 GeneTree:ENSGT00530000062880
            KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:CR848032 EMBL:BC048899
            IPI:IPI00502344 RefSeq:NP_938180.1 UniGene:Dr.75120 SMR:Q802C9
            STRING:Q802C9 Ensembl:ENSDART00000058913 GeneID:386634
            KEGG:dre:386634 CTD:386634 InParanoid:Q802C9 NextBio:20813962
            Uniprot:Q802C9
        Length = 406

 Score = 137 (53.3 bits), Expect = 1.5e-08, P = 1.5e-08
 Identities = 42/174 (24%), Positives = 75/174 (43%)

Query:     6 VRSTDLSKFSCD---ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHID 62
             VR+ D+ K   D   I++ TP                ++   LDEAD++   G   +  +
Sbjct:   140 VRN-DVQKLQADVPHIVVGTPGRVFDMLNRRYLSPKYIKMFALDEADEMLSRGFKDQIYE 198

Query:    63 PVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSE 122
                K  ++  ++  L SAT+P  V E+    M D VR++V ++    E I+Q  +    E
Sbjct:   199 IFQKLATDTQVI--LLSATMPQEVLEVTTKFMRDPVRILVKKEELTLEGIRQFYINVEKE 256

Query:   123 EGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
             E KL  L   +        +IF+ ++ +   L  ++   D     +H D+ Q +
Sbjct:   257 EWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSALHGDMEQKE 310


>UNIPROTKB|Q3SZ65 [details] [associations]
            symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
            species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0003743 "translation initiation factor activity" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 KO:K03257
            OrthoDB:EOG4640C1 EMBL:BC103106 IPI:IPI00711238
            RefSeq:NP_001029216.1 UniGene:Bt.13925 ProteinModelPortal:Q3SZ65
            SMR:Q3SZ65 STRING:Q3SZ65 PRIDE:Q3SZ65 Ensembl:ENSBTAT00000019596
            GeneID:286819 KEGG:bta:286819 CTD:1974 InParanoid:Q3SZ65
            OMA:TENDARQ NextBio:20806473 ArrayExpress:Q3SZ65 Uniprot:Q3SZ65
        Length = 407

 Score = 137 (53.3 bits), Expect = 1.5e-08, P = 1.5e-08
 Identities = 41/159 (25%), Positives = 69/159 (43%)

Query:    18 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 77
             I++ TP                ++  VLDEAD++   G     I  + +   N SI   L
Sbjct:   155 IVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRG-FKDQIYEIFQKL-NTSIQVVL 212

Query:    78 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESL 137
              SAT+P  V E+ +  M D +R++V ++    E IKQ  +    EE KL  L   +    
Sbjct:   213 LSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLT 272

Query:   138 NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
                 +IF+ ++ +   L  ++   D     +H D+ Q +
Sbjct:   273 ITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKE 311

WARNING:  HSPs involving 235 database sequences were not reported due to the
          limiting value of parameter B = 250.


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.135   0.366    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      178       164   0.00088  107 3  11 22  0.37    32
                                                     30  0.45    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  485
  No. of states in DFA:  549 (58 KB)
  Total size of DFA:  116 KB (2077 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.22u 0.12s 14.34t   Elapsed:  00:00:00
  Total cpu time:  14.25u 0.12s 14.37t   Elapsed:  00:00:00
  Start:  Fri May 10 23:22:40 2013   End:  Fri May 10 23:22:40 2013
WARNINGS ISSUED:  2
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with AT3G09720 AT3G09720 AT3G09720	protein from Arabidopsis thaliana	2.1e-61
BLAST match view associations BLAST with ddx52 ddx52 ddx52 DEAD/DEAH box helicase	gene from Dictyostelium discoideum	1.8e-34
BLAST match view associations BLAST with ROK1 ROK1 ROK1 RNA-dependent ATPase	gene from Saccharomyces cerevisiae	5.4e-33
BLAST match view associations BLAST with CG5589 CG5589 CG5589	protein from Drosophila melanogaster	1.6e-28
BLAST match view associations BLAST with ddx52 ddx52 ddx52 DEAD (Asp-Glu-Ala-Asp) box polypeptide 52	gene_product from Danio rerio	3.6e-28
BLAST match view associations BLAST with Ddx52 Ddx52 Ddx52 DEAD (Asp-Glu-Ala-Asp) box polypeptide 52	gene from Rattus norvegicus	7.1e-27
BLAST match view associations BLAST with DDX52 DDX52 DDX52 Probable ATP-dependent RNA helicase DDX52	protein from Bos taurus	9.1e-27
BLAST match view associations BLAST with DDX52 DDX52 DDX52 Uncharacterized protein	protein from Sus scrofa	9.8e-27
BLAST match view associations BLAST with Ddx52 Ddx52 Ddx52 DEAD (Asp-Glu-Ala-Asp) box polypeptide 52	protein from Mus musculus	1.2e-26
BLAST match view associations BLAST with DDX52 DDX52 DDX52 Uncharacterized protein	protein from Canis lupus familiaris	2.5e-26
BLAST match view associations BLAST with DDX52 DDX52 DDX52 Probable ATP-dependent RNA helicase DDX52	protein from Homo sapiens	3.0e-26
BLAST match view associations BLAST with DDX52 DDX52 DDX52 Probable ATP-dependent RNA helicase DDX52	protein from Homo sapiens	6.9e-26
BLAST match view associations BLAST with DDX52 DDX52 DDX52 Uncharacterized protein	protein from Canis lupus familiaris	1.1e-25
BLAST match view associations BLAST with DDX52 DDX52 DDX52 Uncharacterized protein	protein from Gallus gallus	1.9e-25
BLAST match view associations BLAST with DDX52 DDX52 DDX52 Uncharacterized protein	protein from Gallus gallus	2.5e-25
BLAST match view associations BLAST with R05D11.4 R05D11.4 R05D11.4	gene from Caenorhabditis elegans	4.1e-18
BLAST match view associations BLAST with DED1 DED1 DED1 ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase	gene from Saccharomyces cerevisiae	8.9e-17
BLAST match view associations BLAST with DBP1 DBP1 DBP1 Putative ATP-dependent RNA helicase of the DEAD-box protein family	gene from Saccharomyces cerevisiae	1.1e-15
BLAST match view associations BLAST with orf19.7392 orf19.7392 orf19.7392	gene_product from Candida albicans	4.4e-15
BLAST match view associations BLAST with AT2G47330 AT2G47330 AT2G47330	protein from Arabidopsis thaliana	5.4e-15
BLAST match view associations BLAST with CPS_1590 CPS_1590 CPS_1590 ATP-dependent RNA helicase, DEAD box family	protein from Colwellia psychrerythraea 34H	7.1e-15
BLAST match view associations BLAST with rhlE rhlE rhlE ATP-dependent RNA helicase	protein from Escherichia coli K-12	8.7e-14
BLAST match view associations BLAST with DDX42 DDX42 DDX42 ATP-dependent RNA helicase DDX42	protein from Gallus gallus	2.5e-13
BLAST match view associations BLAST with DDX42 DDX42 DDX42 ATP-dependent RNA helicase DDX42	protein from Gallus gallus	3.8e-13
BLAST match view associations BLAST with DDX42 DDX42 DDX42 ATP-dependent RNA helicase DDX42	protein from Gallus gallus	3.8e-13
BLAST match view associations BLAST with ddx42 ddx42 ddx42 DEAD/DEAH box helicase	gene from Dictyostelium discoideum	4.0e-13
BLAST match view associations BLAST with I3LHW0 I3LHW0 I3LHW0 Uncharacterized protein	protein from Sus scrofa	5.5e-13
BLAST match view associations BLAST with LOC100524536 LOC100524536 LOC100524536 Uncharacterized protein	protein from Sus scrofa	5.6e-13
BLAST match view associations BLAST with DDX42 DDX42 DDX42 Uncharacterized protein	protein from Bos taurus	6.3e-13
BLAST match view associations BLAST with PRP28 PRP28 PRP28 RNA helicase in the DEAD-box family	gene from Saccharomyces cerevisiae	6.4e-13
BLAST match view associations BLAST with DBP3 DBP3 DBP3 RNA-Dependent ATPase, member of DExD/H-box family	gene from Saccharomyces cerevisiae	1.1e-12
BLAST match view associations BLAST with CPS_0042 CPS_0042 CPS_0042 ATP-dependent RNA helicase, DEAD box family	protein from Colwellia psychrerythraea 34H	1.1e-12
BLAST match view associations BLAST with CPS_0042 CPS_0042 CPS_0042 ATP-dependent RNA helicase, DEAD box family	protein from Colwellia psychrerythraea 34H	1.1e-12
BLAST match view associations BLAST with DBP3 DBP3 DBP3	gene_product from Candida albicans	1.3e-12
BLAST match view associations BLAST with Ddx42 Ddx42 Ddx42 DEAD (Asp-Glu-Ala-Asp) box polypeptide 42	protein from Mus musculus	1.3e-12
BLAST match view associations BLAST with Ddx42 Ddx42 Ddx42 DEAD (Asp-Glu-Ala-Asp) box polypeptide 42	gene from Rattus norvegicus	1.3e-12
BLAST match view associations BLAST with DDX42 DDX42 DDX42 Uncharacterized protein	protein from Canis lupus familiaris	1.3e-12
BLAST match view associations BLAST with DDX42 DDX42 DDX42 ATP-dependent RNA helicase DDX42	protein from Homo sapiens	1.3e-12
BLAST match view associations BLAST with DDX42 DDX42 DDX42 Uncharacterized protein	protein from Sus scrofa	1.3e-12
BLAST match view associations BLAST with DDX42 DDX42 DDX42 ATP-dependent RNA helicase DDX42	protein from Pongo abelii	1.3e-12
BLAST match view associations BLAST with SO_1501 SO_1501 SO_1501 ATP-dependent RNA helicase DEAD box family	protein from Shewanella oneidensis MR-1	1.4e-12
BLAST match view associations BLAST with SO_1501 SO_1501 SO_1501 ATP-dependent RNA helicase, DEAD box family	protein from Shewanella oneidensis MR-1	1.4e-12
BLAST match view associations BLAST with ddx41 ddx41 ddx41 DEAD box protein abstrakt	gene from Dictyostelium discoideum	2.1e-12
BLAST match view associations BLAST with SO_2571 SO_2571 SO_2571 ATP-dependent RNA helicase DEAD box family	protein from Shewanella oneidensis MR-1	2.5e-12
BLAST match view associations BLAST with SO_2571 SO_2571 SO_2571 ATP-dependent RNA helicase, DEAD box family	protein from Shewanella oneidensis MR-1	2.5e-12
BLAST match view associations BLAST with vbh-1 vbh-1 vbh-1	gene from Caenorhabditis elegans	2.7e-12
BLAST match view associations BLAST with DDX53 DDX53 DDX53 Probable ATP-dependent RNA helicase DDX53	protein from Homo sapiens	3.2e-12
BLAST match view associations BLAST with rhlB rhlB rhlB ATP-dependent RNA helicase RhlB	protein from Vibrio cholerae O1 biovar El Tor str. N16961	3.5e-12
BLAST match view associations BLAST with VC_0305 VC_0305 VC_0305 ATP-dependent RNA helicase RhlB	protein from Vibrio cholerae O1 biovar El Tor	3.5e-12
BLAST match view associations BLAST with Rm62 Rm62 Rm62	protein from Drosophila melanogaster	5.0e-12
BLAST match view associations BLAST with rhlB rhlB rhlB RhlB	protein from Escherichia coli K-12	5.2e-12
BLAST match view associations BLAST with SO_1383 SO_1383 SO_1383 ATP-dependent RNA helicase, DEAD box family	protein from Shewanella oneidensis MR-1	5.5e-12
BLAST match view associations BLAST with ddx42 ddx42 ddx42 DEAD (Asp-Glu-Ala-Asp) box polypeptide 42	gene_product from Danio rerio	8.9e-12
BLAST match view associations BLAST with RGD1309586 RGD1309586 RGD1309586 similar to probable ATP-dependent RNA helicase - mouse	gene from Rattus norvegicus	9.2e-12
BLAST match view associations BLAST with D1Pas1 D1Pas1 D1Pas1 DNA segment, Chr 1, Pasteur Institute 1	protein from Mus musculus	9.2e-12
BLAST match view associations BLAST with DDX59 DDX59 DDX59 Uncharacterized protein	protein from Canis lupus familiaris	9.3e-12
BLAST match view associations BLAST with rhlB rhlB rhlB ATP-dependent RNA helicase RhlB	protein from Shewanella oneidensis MR-1	9.4e-12
BLAST match view associations BLAST with SO_0407 SO_0407 SO_0407 ATP-dependent RNA helicase, DEAD box family	protein from Shewanella oneidensis MR-1	9.4e-12
BLAST match view associations BLAST with helB2 helB2 helB2 putative U5 small nuclear ribonucleoprotein	gene from Dictyostelium discoideum	1.0e-11
BLAST match view associations BLAST with DDX59 DDX59 DDX59 Uncharacterized protein	protein from Canis lupus familiaris	1.1e-11
BLAST match view associations BLAST with rhlE rhlE rhlE ATP-dependent RNA helicase	protein from Coxiella burnetii RSA 493	1.1e-11
BLAST match view associations BLAST with CBU_0670 CBU_0670 CBU_0670 ATP-dependent RNA helicase RhlE, putative	protein from Coxiella burnetii RSA 493	1.1e-11
BLAST match view associations BLAST with AT5G63120 AT5G63120 AT5G63120	protein from Arabidopsis thaliana	1.3e-11
BLAST match view associations BLAST with ddx4 ddx4 ddx4 Probable ATP-dependent RNA helicase DDX4	protein from Pelophylax lessonae	1.3e-11
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Bos taurus	1.5e-11
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Sus scrofa	1.5e-11
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Canis lupus familiaris	1.5e-11
BLAST match view associations BLAST with DDX3X DDX3X DDX3X ATP-dependent RNA helicase DDX3X	protein from Homo sapiens	1.5e-11
BLAST match view associations BLAST with DDX3Y DDX3Y DDX3Y Uncharacterized protein	protein from Sus scrofa	1.5e-11
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Canis lupus familiaris	1.7e-11
BLAST match view associations BLAST with laf-1 laf-1 laf-1	gene from Caenorhabditis elegans	1.7e-11
BLAST match view associations BLAST with VC_A0768 VC_A0768 VC_A0768 ATP-dependent RNA helicase, DEAD box family	protein from Vibrio cholerae O1 biovar El Tor str. N16961	1.8e-11
BLAST match view associations BLAST with VC_A0768 VC_A0768 VC_A0768 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Vibrio cholerae O1 biovar El Tor	1.8e-11
BLAST match view associations BLAST with DDX3Y DDX3Y DDX3Y Uncharacterized protein	protein from Bos taurus	1.9e-11
BLAST match view associations BLAST with C46F11.4 C46F11.4 C46F11.4	gene from Caenorhabditis elegans	2.0e-11
BLAST match view associations BLAST with pl10 pl10 pl10	gene_product from Danio rerio	2.1e-11
BLAST match view associations BLAST with ddx3 ddx3 ddx3 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3	gene_product from Danio rerio	2.7e-11
BLAST match view associations BLAST with AT3G58510 AT3G58510 AT3G58510	protein from Arabidopsis thaliana	2.8e-11
BLAST match view associations BLAST with ddx23 ddx23 ddx23 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23	gene_product from Danio rerio	3.0e-11
BLAST match view associations BLAST with Ddx23 Ddx23 Ddx23 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23	gene from Rattus norvegicus	3.2e-11
BLAST match view associations BLAST with DDX23 DDX23 DDX23 DDX23 protein	protein from Bos taurus	3.2e-11
BLAST match view associations BLAST with DDX23 DDX23 DDX23 Uncharacterized protein	protein from Canis lupus familiaris	3.2e-11
BLAST match view associations BLAST with DDX23 DDX23 DDX23 Probable ATP-dependent RNA helicase DDX23	protein from Homo sapiens	3.2e-11
BLAST match view associations BLAST with Ddx3x Ddx3x Ddx3x DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked	protein from Mus musculus	3.2e-11
BLAST match view associations BLAST with Ddx3x Ddx3x Ddx3x DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	gene from Rattus norvegicus	3.2e-11
BLAST match view associations BLAST with PF10_0209 PF10_0209 PF10_0209 RNA helicase, putative	gene from Plasmodium falciparum	3.3e-11
BLAST match view associations BLAST with PF10_0209 PF10_0209 PF10_0209 RNA helicase, putative	protein from Plasmodium falciparum 3D7	3.3e-11
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Gallus gallus	3.8e-11
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Gallus gallus	3.8e-11
BLAST match view associations BLAST with DDX3Y DDX3Y DDX3Y ATP-dependent RNA helicase DDX3Y	protein from Homo sapiens	4.0e-11
BLAST match view associations BLAST with DDX3Y DDX3Y DDX3Y ATP-dependent RNA helicase DDX3Y	protein from Homo sapiens	4.0e-11
BLAST match view associations BLAST with RH20 RH20 RH20 RNA helicase 20	protein from Arabidopsis thaliana	4.2e-11
BLAST match view associations BLAST with Ddx59 Ddx59 Ddx59 DEAD (Asp-Glu-Ala-Asp) box polypeptide 59	protein from Mus musculus	4.7e-11
BLAST match view associations BLAST with Ddx3y Ddx3y Ddx3y DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 Y-linked	gene from Rattus norvegicus	5.1e-11
BLAST match view associations BLAST with Ddx3y Ddx3y Ddx3y DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked	protein from Mus musculus	5.2e-11
BLAST match view associations BLAST with VC1407 VC1407 VC1407 ATP-dependent RNA helicase RhlE	protein from Vibrio cholerae O1 biovar El Tor str. N16961	5.7e-11