BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030396
(178 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449440077|ref|XP_004137811.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 57-like [Cucumis
sativus]
Length = 616
Score = 300 bits (769), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 149/172 (86%), Positives = 164/172 (95%), Gaps = 1/172 (0%)
Query: 3 KELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHID 62
KE++R D SKFSCD+LISTPLRLRLAIR+KKIDLSRVEYLVLDE+DKLFE+G L+K ID
Sbjct: 243 KEVLRHADFSKFSCDVLISTPLRLRLAIRKKKIDLSRVEYLVLDESDKLFELG-LIKQID 301
Query: 63 PVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSE 122
VVKACSNPSIVRSLFSATLPDFVE+LARS+MHDAVRVIVGRKNTASE++KQKLVFAGSE
Sbjct: 302 AVVKACSNPSIVRSLFSATLPDFVEDLARSVMHDAVRVIVGRKNTASETVKQKLVFAGSE 361
Query: 123 EGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
EGKLLALRQSF+ESLNPPVLIFVQSK+RAKELYGELAF++IR VIHSDLSQ
Sbjct: 362 EGKLLALRQSFSESLNPPVLIFVQSKERAKELYGELAFENIRVSVIHSDLSQ 413
>gi|449516225|ref|XP_004165148.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 57-like, partial
[Cucumis sativus]
Length = 441
Score = 300 bits (769), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 149/174 (85%), Positives = 165/174 (94%), Gaps = 1/174 (0%)
Query: 3 KELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHID 62
KE++R D SKFSCD+LISTPLRLRLAIR+KKIDLSRVEYLVLDE+DKLFE+G L+K ID
Sbjct: 269 KEVLRHADFSKFSCDVLISTPLRLRLAIRKKKIDLSRVEYLVLDESDKLFELG-LIKQID 327
Query: 63 PVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSE 122
VVKACSNPSIVRSLFSATLPDFVE+LARS+MHDAVRVIVGRKNTASE++KQKLVFAGSE
Sbjct: 328 AVVKACSNPSIVRSLFSATLPDFVEDLARSVMHDAVRVIVGRKNTASETVKQKLVFAGSE 387
Query: 123 EGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
EGKLLALRQSF+ESLNPPVLIFVQSK+RAKELYGELAF++IR VIHSDLSQ +
Sbjct: 388 EGKLLALRQSFSESLNPPVLIFVQSKERAKELYGELAFENIRVSVIHSDLSQLE 441
>gi|225439904|ref|XP_002279705.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 57 [Vitis vinifera]
Length = 524
Score = 296 bits (757), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 147/176 (83%), Positives = 164/176 (93%), Gaps = 1/176 (0%)
Query: 1 MKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKH 60
+ KEL+RS D+SK CDILISTPLRLR AIR+KK+DLSRVEYLVLDE+DKLFE+G L+K
Sbjct: 231 LTKELLRSGDISKLPCDILISTPLRLRSAIRKKKLDLSRVEYLVLDESDKLFELG-LVKQ 289
Query: 61 IDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAG 120
ID VVKACSNPSI+RSLFSATLPDFVEELAR+IMHDAVRVI+GRKN+ASE IKQKLVFAG
Sbjct: 290 IDAVVKACSNPSIIRSLFSATLPDFVEELARTIMHDAVRVIIGRKNSASELIKQKLVFAG 349
Query: 121 SEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
SEEGKLLALRQSFAESLNPP+L+FVQSK+RAKELY ELAFDDIR VIH+DLSQ+Q
Sbjct: 350 SEEGKLLALRQSFAESLNPPILLFVQSKERAKELYTELAFDDIRVDVIHADLSQSQ 405
>gi|297741568|emb|CBI32700.3| unnamed protein product [Vitis vinifera]
Length = 523
Score = 295 bits (756), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 147/176 (83%), Positives = 164/176 (93%), Gaps = 1/176 (0%)
Query: 1 MKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKH 60
+ KEL+RS D+SK CDILISTPLRLR AIR+KK+DLSRVEYLVLDE+DKLFE+G L+K
Sbjct: 230 LTKELLRSGDISKLPCDILISTPLRLRSAIRKKKLDLSRVEYLVLDESDKLFELG-LVKQ 288
Query: 61 IDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAG 120
ID VVKACSNPSI+RSLFSATLPDFVEELAR+IMHDAVRVI+GRKN+ASE IKQKLVFAG
Sbjct: 289 IDAVVKACSNPSIIRSLFSATLPDFVEELARTIMHDAVRVIIGRKNSASELIKQKLVFAG 348
Query: 121 SEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
SEEGKLLALRQSFAESLNPP+L+FVQSK+RAKELY ELAFDDIR VIH+DLSQ+Q
Sbjct: 349 SEEGKLLALRQSFAESLNPPILLFVQSKERAKELYTELAFDDIRVDVIHADLSQSQ 404
>gi|147784525|emb|CAN61726.1| hypothetical protein VITISV_032421 [Vitis vinifera]
Length = 554
Score = 295 bits (755), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 146/176 (82%), Positives = 164/176 (93%), Gaps = 1/176 (0%)
Query: 1 MKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKH 60
+ KEL+RS D+SK CDILISTPLRLR AIR+KK+DLSRVEYLVLDE+DKLFE+G L+K
Sbjct: 227 LTKELLRSGDISKLPCDILISTPLRLRSAIRKKKLDLSRVEYLVLDESDKLFELG-LVKQ 285
Query: 61 IDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAG 120
ID VVKACSNPSI+RSLFSATLPDFVEELAR+IMHDAVRVI+GRKN+ASE IKQKLVFAG
Sbjct: 286 IDAVVKACSNPSIIRSLFSATLPDFVEELARTIMHDAVRVIIGRKNSASELIKQKLVFAG 345
Query: 121 SEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+EEGKLLALRQSFAESLNPP+L+FVQSK+RAKELY ELAFDDIR VIH+DLSQ+Q
Sbjct: 346 NEEGKLLALRQSFAESLNPPILLFVQSKERAKELYTELAFDDIRVDVIHADLSQSQ 401
>gi|255559765|ref|XP_002520902.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223540033|gb|EEF41611.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 535
Score = 288 bits (737), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 143/176 (81%), Positives = 159/176 (90%), Gaps = 1/176 (0%)
Query: 1 MKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKH 60
M KELVR+ DLS+ CDIL+STPLRL+LAIR+KK+DLSRVEYLVLDE+DKLFE+G LLK
Sbjct: 242 MTKELVRTKDLSRLPCDILVSTPLRLQLAIRKKKVDLSRVEYLVLDESDKLFELG-LLKQ 300
Query: 61 IDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAG 120
ID V KACSNPS++RSLFSATLP+ VEELAR+IMHDAVRVIVGRKN ASE+IKQKLVF G
Sbjct: 301 IDSVFKACSNPSVIRSLFSATLPESVEELARTIMHDAVRVIVGRKNAASETIKQKLVFTG 360
Query: 121 SEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
SEEGKL+ALRQSFAESLNPPVLIFVQ+K+RA ELY EL FD IR GVIHSDL QTQ
Sbjct: 361 SEEGKLIALRQSFAESLNPPVLIFVQNKERANELYEELKFDSIRVGVIHSDLLQTQ 416
>gi|356572415|ref|XP_003554364.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 57-like [Glycine
max]
Length = 536
Score = 286 bits (731), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 141/176 (80%), Positives = 157/176 (89%), Gaps = 1/176 (0%)
Query: 1 MKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKH 60
M K L+R+ D SKF CD+LISTPLRLRLAI+RKKIDLSRVEYLVLDE+DKLFE L K
Sbjct: 246 MTKNLLRNADFSKFPCDVLISTPLRLRLAIKRKKIDLSRVEYLVLDESDKLFE-PELFKQ 304
Query: 61 IDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAG 120
ID V+KACSNPSI+RSLFSATLPDFVE+ AR +MHDAVRVIVGRKN ASE+IKQKLVF G
Sbjct: 305 IDSVIKACSNPSIIRSLFSATLPDFVEDQARELMHDAVRVIVGRKNMASETIKQKLVFTG 364
Query: 121 SEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
SEEGKLLA+RQSFAESLNPPVL+F+QSK+RAKELY ELAFD+IR VIHSDLSQ +
Sbjct: 365 SEEGKLLAIRQSFAESLNPPVLVFLQSKERAKELYSELAFDNIRVDVIHSDLSQAE 420
>gi|357510607|ref|XP_003625592.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355500607|gb|AES81810.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 619
Score = 282 bits (722), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 138/176 (78%), Positives = 158/176 (89%), Gaps = 1/176 (0%)
Query: 1 MKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKH 60
M K L+R+ D SKFSCDILISTPLRL LAI++KK+DLSRVEYLVLDE+DKLFE L K
Sbjct: 236 MTKNLLRNADFSKFSCDILISTPLRLCLAIKKKKVDLSRVEYLVLDESDKLFE-PQLFKQ 294
Query: 61 IDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAG 120
ID ++KAC+NPSI+RSLFSATLPDFVE+ AR +MHDAVRVIVGRKN AS++IKQKLVF G
Sbjct: 295 IDSIIKACTNPSIIRSLFSATLPDFVEDRARELMHDAVRVIVGRKNMASDTIKQKLVFTG 354
Query: 121 SEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
SEEGKLLA+RQSFAESLNPPVL+F+QSK+RAKELYGELAFD+IR VIHSDLSQ +
Sbjct: 355 SEEGKLLAIRQSFAESLNPPVLVFLQSKERAKELYGELAFDNIRVDVIHSDLSQEE 410
>gi|356505198|ref|XP_003521379.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 57-like [Glycine
max]
Length = 537
Score = 281 bits (719), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 140/176 (79%), Positives = 155/176 (88%), Gaps = 1/176 (0%)
Query: 1 MKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKH 60
M K L+R+ D SKF CD+LISTPLRLRLAI+RKKIDLSRVEYLVLDE+DKLFE L K
Sbjct: 247 MTKNLLRNADFSKFPCDVLISTPLRLRLAIKRKKIDLSRVEYLVLDESDKLFE-PELFKQ 305
Query: 61 IDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAG 120
ID V+KACSNPSI+RSLFSATLPDFVE+ AR +MHDAVRVIVGRKN ASE+IKQKLVF G
Sbjct: 306 IDSVIKACSNPSIIRSLFSATLPDFVEDRARELMHDAVRVIVGRKNMASETIKQKLVFTG 365
Query: 121 SEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
SEEGKLLA+RQSFAESLNPPVL+F+QSK+RAKEL ELAFD IR VIHSDLSQ +
Sbjct: 366 SEEGKLLAIRQSFAESLNPPVLVFLQSKERAKELCSELAFDSIRVDVIHSDLSQAE 421
>gi|22330935|ref|NP_187583.2| DEAD-box ATP-dependent RNA helicase 57 [Arabidopsis thaliana]
gi|75328099|sp|Q84TG1.1|RH57_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 57
gi|29028778|gb|AAO64768.1| At3g09720 [Arabidopsis thaliana]
gi|110742885|dbj|BAE99340.1| RNA helicase like protein [Arabidopsis thaliana]
gi|332641282|gb|AEE74803.1| DEAD-box ATP-dependent RNA helicase 57 [Arabidopsis thaliana]
Length = 541
Score = 278 bits (711), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 140/172 (81%), Positives = 156/172 (90%), Gaps = 1/172 (0%)
Query: 1 MKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKH 60
M K LV++ D SK CD+LISTP+RL+ AI+ KKIDLS+VEYLVLDE+DKLFE +LLK
Sbjct: 244 MTKPLVKTADFSKLWCDVLISTPMRLKRAIKAKKIDLSKVEYLVLDESDKLFE-QSLLKQ 302
Query: 61 IDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAG 120
ID VVKACSNPSI+RSLFSATLPD VEELARSIMHDAVRVI+GRKNTASE++KQKLVFAG
Sbjct: 303 IDCVVKACSNPSIIRSLFSATLPDSVEELARSIMHDAVRVIIGRKNTASETVKQKLVFAG 362
Query: 121 SEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDL 172
SEEGKLLALRQSFAESLNPPVLIFVQSK+RAKELY EL ++IRAGVIHSDL
Sbjct: 363 SEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYDELKCENIRAGVIHSDL 414
>gi|6682259|gb|AAF23311.1|AC016661_36 putative RNA helicase [Arabidopsis thaliana]
Length = 545
Score = 278 bits (711), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 140/172 (81%), Positives = 156/172 (90%), Gaps = 1/172 (0%)
Query: 1 MKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKH 60
M K LV++ D SK CD+LISTP+RL+ AI+ KKIDLS+VEYLVLDE+DKLFE +LLK
Sbjct: 248 MTKPLVKTADFSKLWCDVLISTPMRLKRAIKAKKIDLSKVEYLVLDESDKLFE-QSLLKQ 306
Query: 61 IDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAG 120
ID VVKACSNPSI+RSLFSATLPD VEELARSIMHDAVRVI+GRKNTASE++KQKLVFAG
Sbjct: 307 IDCVVKACSNPSIIRSLFSATLPDSVEELARSIMHDAVRVIIGRKNTASETVKQKLVFAG 366
Query: 121 SEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDL 172
SEEGKLLALRQSFAESLNPPVLIFVQSK+RAKELY EL ++IRAGVIHSDL
Sbjct: 367 SEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYDELKCENIRAGVIHSDL 418
>gi|297833736|ref|XP_002884750.1| hypothetical protein ARALYDRAFT_478294 [Arabidopsis lyrata subsp.
lyrata]
gi|297330590|gb|EFH61009.1| hypothetical protein ARALYDRAFT_478294 [Arabidopsis lyrata subsp.
lyrata]
Length = 539
Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 139/172 (80%), Positives = 156/172 (90%), Gaps = 1/172 (0%)
Query: 1 MKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKH 60
M K LV++ D SK CD+LISTP+RL+ AI+ KKIDLS+VEYLVLDE+DKLFE +LLK
Sbjct: 242 MTKPLVKTADFSKLRCDVLISTPMRLKRAIKAKKIDLSKVEYLVLDESDKLFEQ-SLLKQ 300
Query: 61 IDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAG 120
ID VVKACSNPSI+RSLFSATLPD VEELARSIMHDAVRVI+GRKNTASE++KQKLVFAG
Sbjct: 301 IDCVVKACSNPSIIRSLFSATLPDSVEELARSIMHDAVRVIIGRKNTASETVKQKLVFAG 360
Query: 121 SEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDL 172
+EEGKLLALRQSFAESLNPPVLIFVQSK+RAKELY EL ++IRAGVIHSDL
Sbjct: 361 TEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYDELKCENIRAGVIHSDL 412
>gi|115473749|ref|NP_001060473.1| Os07g0647900 [Oryza sativa Japonica Group]
gi|143456709|sp|Q5K5B6.2|RH57_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 57
gi|22093706|dbj|BAC07000.1| putative ATP-dependent RNA helicase [Oryza sativa Japonica Group]
gi|23495827|dbj|BAC20037.1| putative ATP-dependent RNA helicase [Oryza sativa Japonica Group]
gi|113612009|dbj|BAF22387.1| Os07g0647900 [Oryza sativa Japonica Group]
gi|125601315|gb|EAZ40891.1| hypothetical protein OsJ_25369 [Oryza sativa Japonica Group]
Length = 540
Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 130/176 (73%), Positives = 153/176 (86%), Gaps = 1/176 (0%)
Query: 1 MKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKH 60
M K+L +S + CDILISTPLRL A++++ +DLSRVEYLVLDE+DKLFE+G ++
Sbjct: 249 MTKDLSKSGNFKDMHCDILISTPLRLDHAVQKRDLDLSRVEYLVLDESDKLFELG-FVEV 307
Query: 61 IDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAG 120
ID VVKACSNPSI+RSLFSATLPD +E LAR+IMHDAVRVIVGRKN+AS IKQKL+FAG
Sbjct: 308 IDSVVKACSNPSIIRSLFSATLPDSIETLARTIMHDAVRVIVGRKNSASSLIKQKLIFAG 367
Query: 121 SEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+E+GKLLALRQSFAESLNPPVLIFVQSK+RAKELY ELAFDD+RA VIH+DL + Q
Sbjct: 368 TEKGKLLALRQSFAESLNPPVLIFVQSKERAKELYKELAFDDVRADVIHADLDEEQ 423
>gi|224127806|ref|XP_002329182.1| predicted protein [Populus trichocarpa]
gi|222870963|gb|EEF08094.1| predicted protein [Populus trichocarpa]
Length = 531
Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 136/178 (76%), Positives = 155/178 (87%), Gaps = 3/178 (1%)
Query: 1 MKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKI--DLSRVEYLVLDEADKLFEVGNLL 58
M KEL+R+TD +K CDILISTP RL+L I +KK DLSRVEYLVLDE+DKLFE +LL
Sbjct: 236 MTKELLRNTDFTKLPCDILISTPRRLQLCICKKKKKIDLSRVEYLVLDESDKLFER-SLL 294
Query: 59 KHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVF 118
+ D VVKACSNPSI+RSLFSATLP FVE++AR++MHDAVR+IVG KN ASESIKQKL+F
Sbjct: 295 EQTDSVVKACSNPSIIRSLFSATLPGFVEDVARTVMHDAVRIIVGDKNAASESIKQKLIF 354
Query: 119 AGSEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
AGSEEGKLLALRQSFAESLNPP+LIFVQS +RA+ELYGEL FD IR GVIHS+LSQ Q
Sbjct: 355 AGSEEGKLLALRQSFAESLNPPMLIFVQSIERAEELYGELKFDSIRVGVIHSNLSQEQ 412
>gi|125559398|gb|EAZ04934.1| hypothetical protein OsI_27114 [Oryza sativa Indica Group]
Length = 540
Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 129/176 (73%), Positives = 153/176 (86%), Gaps = 1/176 (0%)
Query: 1 MKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKH 60
M K+L +S + CDIL+STPLRL A++++ +DLSRVEYLVLDE+DKLFE+G ++
Sbjct: 249 MTKDLSKSGNFKDMHCDILVSTPLRLDHAVQKRDLDLSRVEYLVLDESDKLFELG-FVEV 307
Query: 61 IDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAG 120
ID VVKACSNPSI+RSLFSATLPD +E LAR+IMHDAVRVIVGRKN+AS IKQKL+FAG
Sbjct: 308 IDSVVKACSNPSIIRSLFSATLPDSIETLARTIMHDAVRVIVGRKNSASSLIKQKLIFAG 367
Query: 121 SEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+E+GKLLALRQSFAESLNPPVLIFVQSK+RAKELY ELAFDD+RA VIH+DL + Q
Sbjct: 368 TEKGKLLALRQSFAESLNPPVLIFVQSKERAKELYKELAFDDVRADVIHADLDEEQ 423
>gi|414887919|tpg|DAA63933.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 292
Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 124/176 (70%), Positives = 149/176 (84%), Gaps = 1/176 (0%)
Query: 1 MKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKH 60
M KEL +S + CDIL+STPLRL A++++ +DLS VEYLVLDE+DKLFE+G ++
Sbjct: 1 MTKELSKSGNFKDMHCDILVSTPLRLDHAVKKRDLDLSSVEYLVLDESDKLFELG-FVEV 59
Query: 61 IDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAG 120
+D VV+ACSNPSI+RSLFSATLPD +E LAR+IMHDA+RVIVGRKN+AS IKQKL+FAG
Sbjct: 60 VDSVVEACSNPSIIRSLFSATLPDSIETLARTIMHDAIRVIVGRKNSASSLIKQKLIFAG 119
Query: 121 SEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+E GKLL LRQ+F ESLNPPVLIFVQSK+RAKELY ELAFDDIR VIH+DLS+ Q
Sbjct: 120 TERGKLLTLRQNFQESLNPPVLIFVQSKERAKELYKELAFDDIRVDVIHADLSEQQ 175
>gi|293333116|ref|NP_001169206.1| uncharacterized protein LOC100383059 [Zea mays]
gi|223975507|gb|ACN31941.1| unknown [Zea mays]
Length = 364
Score = 252 bits (644), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 124/176 (70%), Positives = 149/176 (84%), Gaps = 1/176 (0%)
Query: 1 MKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKH 60
M KEL +S + CDIL+STPLRL A++++ +DLS VEYLVLDE+DKLFE+G ++
Sbjct: 73 MTKELSKSGNFKDMHCDILVSTPLRLDHAVKKRDLDLSSVEYLVLDESDKLFELG-FVEV 131
Query: 61 IDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAG 120
+D VV+ACSNPSI+RSLFSATLPD +E LAR+IMHDA+RVIVGRKN+AS IKQKL+FAG
Sbjct: 132 VDSVVEACSNPSIIRSLFSATLPDSIETLARTIMHDAIRVIVGRKNSASSLIKQKLIFAG 191
Query: 121 SEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+E GKLL LRQ+F ESLNPPVLIFVQSK+RAKELY ELAFDDIR VIH+DLS+ Q
Sbjct: 192 TERGKLLTLRQNFQESLNPPVLIFVQSKERAKELYKELAFDDIRVDVIHADLSEQQ 247
>gi|414887918|tpg|DAA63932.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 541
Score = 251 bits (642), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 124/176 (70%), Positives = 149/176 (84%), Gaps = 1/176 (0%)
Query: 1 MKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKH 60
M KEL +S + CDIL+STPLRL A++++ +DLS VEYLVLDE+DKLFE+G ++
Sbjct: 250 MTKELSKSGNFKDMHCDILVSTPLRLDHAVKKRDLDLSSVEYLVLDESDKLFELG-FVEV 308
Query: 61 IDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAG 120
+D VV+ACSNPSI+RSLFSATLPD +E LAR+IMHDA+RVIVGRKN+AS IKQKL+FAG
Sbjct: 309 VDSVVEACSNPSIIRSLFSATLPDSIETLARTIMHDAIRVIVGRKNSASSLIKQKLIFAG 368
Query: 121 SEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+E GKLL LRQ+F ESLNPPVLIFVQSK+RAKELY ELAFDDIR VIH+DLS+ Q
Sbjct: 369 TERGKLLTLRQNFQESLNPPVLIFVQSKERAKELYKELAFDDIRVDVIHADLSEQQ 424
>gi|242046786|ref|XP_002461139.1| hypothetical protein SORBIDRAFT_02g041390 [Sorghum bicolor]
gi|241924516|gb|EER97660.1| hypothetical protein SORBIDRAFT_02g041390 [Sorghum bicolor]
Length = 546
Score = 251 bits (641), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 123/176 (69%), Positives = 149/176 (84%), Gaps = 1/176 (0%)
Query: 1 MKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKH 60
M KEL +S + CDIL+STPLRL A++++ +DLS VEYLVLDE+DKLFE+G ++
Sbjct: 255 MTKELSKSGNFKDMHCDILVSTPLRLDHAVKKRDLDLSSVEYLVLDESDKLFELG-FVEV 313
Query: 61 IDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAG 120
+D VV+ACSNPSI+RSLFSATLPD +E LAR+IMHDA+RVIVGRKN+AS IKQKL+FAG
Sbjct: 314 VDSVVEACSNPSIIRSLFSATLPDSIEALARTIMHDAIRVIVGRKNSASSLIKQKLIFAG 373
Query: 121 SEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+E GKLLALRQSF ESLNPPVLIFVQSK+RAKELY ELAFDD+R IH+DL++ Q
Sbjct: 374 TERGKLLALRQSFQESLNPPVLIFVQSKERAKELYKELAFDDVRVDAIHADLNEQQ 429
>gi|357121693|ref|XP_003562552.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 57-like
[Brachypodium distachyon]
Length = 539
Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 123/176 (69%), Positives = 150/176 (85%), Gaps = 1/176 (0%)
Query: 1 MKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKH 60
M K+L + + CDI++STPLRL A++++ +DLSRVEYLVLDE+DKLFE+G ++
Sbjct: 248 MTKDLSQDGNFKDMHCDIVVSTPLRLDHAVKKRDLDLSRVEYLVLDESDKLFELG-FVEV 306
Query: 61 IDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAG 120
ID +VKACS+PSI+RSLFSATLP+ +E LAR+IMHDAVRVIVGRKN+AS IKQKL+FAG
Sbjct: 307 IDSIVKACSSPSIIRSLFSATLPETIEALARTIMHDAVRVIVGRKNSASSLIKQKLIFAG 366
Query: 121 SEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+E GKL+ALRQSFAESLNPPVLIFVQSK+RAKELY ELAFDDIR VIH DL++ Q
Sbjct: 367 TERGKLMALRQSFAESLNPPVLIFVQSKERAKELYKELAFDDIRVDVIHGDLTEEQ 422
>gi|414591046|tpg|DAA41617.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 414
Score = 235 bits (600), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 116/163 (71%), Positives = 139/163 (85%), Gaps = 1/163 (0%)
Query: 1 MKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKH 60
M KEL +S + CDIL+STPLRL A++++ +DLS VEYLVLDE+DKLFE+G ++
Sbjct: 250 MTKELSKSGNFKDMHCDILVSTPLRLDHAVKKRDLDLSSVEYLVLDESDKLFELG-FVEV 308
Query: 61 IDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAG 120
+D VV+ACSNPSI+RSLFSATLPD +E LAR+IMHDA+RVIVGRKN+AS IKQKL+FAG
Sbjct: 309 VDSVVEACSNPSIIRSLFSATLPDSIETLARTIMHDAIRVIVGRKNSASSLIKQKLIFAG 368
Query: 121 SEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDI 163
+E GKLL LRQ+F ESLNPPVLIFVQSK+RAKELY ELAFDDI
Sbjct: 369 TERGKLLTLRQNFQESLNPPVLIFVQSKERAKELYKELAFDDI 411
>gi|168011374|ref|XP_001758378.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690413|gb|EDQ76780.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 405
Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 110/176 (62%), Positives = 140/176 (79%), Gaps = 1/176 (0%)
Query: 1 MKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKH 60
M K L D S CDIL+STPLRL ++ KIDLS+VE+LVLDE+DKLFE+G ++
Sbjct: 127 MTKALALCNDFSNLPCDILVSTPLRLDALLKGSKIDLSKVEFLVLDESDKLFEMG-FVEQ 185
Query: 61 IDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAG 120
ID VV AC+NP IVR+LFSATLPD VEELARSIMHDA+R+ +G +N+AS++++Q+LVF G
Sbjct: 186 IDSVVAACTNPKIVRTLFSATLPDTVEELARSIMHDAIRITIGERNSASQTVRQRLVFVG 245
Query: 121 SEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
SEEGK+LALRQ F ESL PPVLIFV+SK+RA EL+ +LAFD++ IH+D +Q Q
Sbjct: 246 SEEGKILALRQIFNESLRPPVLIFVKSKERAAELHKQLAFDNLSIDSIHADRTQAQ 301
>gi|302810291|ref|XP_002986837.1| hypothetical protein SELMODRAFT_124676 [Selaginella moellendorffii]
gi|300145491|gb|EFJ12167.1| hypothetical protein SELMODRAFT_124676 [Selaginella moellendorffii]
Length = 415
Score = 211 bits (538), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 97/176 (55%), Positives = 140/176 (79%), Gaps = 1/176 (0%)
Query: 1 MKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKH 60
+ K L ++ D + CDIL+STPLRL ++ +KIDL RVEY +LDE+DKLFE+G ++
Sbjct: 126 LTKRLFKNPDFASLRCDILVSTPLRLDKLVKSEKIDLKRVEYFILDESDKLFELG-FMQQ 184
Query: 61 IDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAG 120
ID +V AC+ +IVR+LFSATLP+ VEELAR+IMHDA+R+++G +N+ASE+++QKL++AG
Sbjct: 185 IDSIVSACTRTNIVRALFSATLPETVEELARTIMHDAIRIVIGDRNSASETVQQKLMYAG 244
Query: 121 SEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+EEGKLLAL+Q F E L+PP+++FVQ K+RAK+L+ L + +R IH+D +QTQ
Sbjct: 245 NEEGKLLALKQFFKEGLSPPIILFVQCKERAKQLHKALLSEKLRVDSIHADRTQTQ 300
>gi|302771716|ref|XP_002969276.1| hypothetical protein SELMODRAFT_410231 [Selaginella moellendorffii]
gi|300162752|gb|EFJ29364.1| hypothetical protein SELMODRAFT_410231 [Selaginella moellendorffii]
Length = 449
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 91/165 (55%), Positives = 129/165 (78%), Gaps = 9/165 (5%)
Query: 20 ISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFS 79
ISTPLRL ++ +KIDL RVEY +LDE+DKLFE+G ++ ID +V AC+ +IVR+LFS
Sbjct: 171 ISTPLRLDKLVKSEKIDLKRVEYFILDESDKLFELG-FMQQIDSIVSACTRTNIVRALFS 229
Query: 80 ATLPDFVEELARSIMHDAVRVIVGRK--------NTASESIKQKLVFAGSEEGKLLALRQ 131
ATLP+ VEELAR+IMHDA+R+++G + N+ASE+++QKL++AG+EEGKLLAL+Q
Sbjct: 230 ATLPETVEELARTIMHDAIRIVIGERGFNSKRCRNSASETVQQKLMYAGNEEGKLLALKQ 289
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
F E L+PP+++FVQ K+RAK+L+ L + +R IH+D +QTQ
Sbjct: 290 FFKEGLSPPIILFVQCKERAKQLHKALLSEKLRVDSIHADRTQTQ 334
>gi|300120302|emb|CBK19856.2| unnamed protein product [Blastocystis hominis]
Length = 563
Score = 185 bits (470), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 93/163 (57%), Positives = 117/163 (71%), Gaps = 1/163 (0%)
Query: 12 SKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP 71
K S D LISTPLRL AI IDLS+ E LVLDE DKLFE G ++ ID ++ ACSNP
Sbjct: 243 GKQSIDCLISTPLRLISAISASIIDLSQAEILVLDEGDKLFEDG-FIEQIDEIMAACSNP 301
Query: 72 SIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
+ R LFSATLP VE +AR+++ D +RVIVG KNT + ++Q LV+ G+EEGKL+A+R
Sbjct: 302 RLQRLLFSATLPQGVEAIARTVLRDPIRVIVGHKNTTTSDVEQSLVYCGNEEGKLIAIRN 361
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
E PP+L+FVQSKDRA++LY ELA+D + VIHSDLS
Sbjct: 362 LLREGFEPPMLVFVQSKDRARQLYTELAYDRVNVDVIHSDLSN 404
>gi|145344838|ref|XP_001416931.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577157|gb|ABO95224.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 474
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 92/173 (53%), Positives = 128/173 (73%), Gaps = 2/173 (1%)
Query: 5 LVRSTDLSKFS-CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDP 63
L ++T + FS DI+++TP+RL++ ++ KIDLS+V YLVLDEADKLFE+G ++ ID
Sbjct: 129 LTKATAGNDFSKVDIVVATPMRLKILLQHDKIDLSKVLYLVLDEADKLFEMG-FVEQIDA 187
Query: 64 VVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEE 123
VV AC N + R+LFSATLP+ VEELARS+M +R+ VG +N+AS +I Q++VF G E
Sbjct: 188 VVAACDNKDVTRALFSATLPEKVEELARSVMARPIRLTVGERNSASNTISQRMVFCGHEA 247
Query: 124 GKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
GKLLALRQ E + PPV+IF QSK+RAK L EL D + G+IH+++S ++
Sbjct: 248 GKLLALRQIIREGIKPPVIIFTQSKERAKHLAKELTGDGLHIGLIHAEMSDSK 300
>gi|281209492|gb|EFA83660.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 880
Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 131/178 (73%), Gaps = 3/178 (1%)
Query: 1 MKKELVRSTDLSKFS--CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLL 58
+ K L +S FS DILI+TPLRL I+ + ++L++VE+LV DEADKLF+ +
Sbjct: 488 LTKGLSQSNKAEPFSKTFDILITTPLRLVHLIKEENVNLNKVEHLVFDEADKLFD-QQFV 546
Query: 59 KHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVF 118
+ +D VV AC N + SLFSAT+ + VE++ARSIM++ +++++G++N+AS ++ QKL+F
Sbjct: 547 EQVDDVVNACKNKKLKISLFSATMNNLVEDMARSIMNNPIKIVIGQENSASTNVDQKLIF 606
Query: 119 AGSEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
G EEGKLLA+RQ F + L PPVLIFVQSK+RA+EL+ EL FD+I VIHSD +Q Q
Sbjct: 607 VGKEEGKLLAVRQLFQKGLEPPVLIFVQSKERAQELFQELIFDNINVDVIHSDRTQFQ 664
>gi|328773151|gb|EGF83188.1| hypothetical protein BATDEDRAFT_29188 [Batrachochytrium
dendrobatidis JAM81]
Length = 472
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/175 (54%), Positives = 124/175 (70%), Gaps = 9/175 (5%)
Query: 8 STDLSKFSCDILISTPLRLRLAIRRKKIDLSR------VEYLVLDEADKLFEVGNLLKHI 61
S+ L F DILISTPLRL AI+ I L + V +LVLDEADKL E+G L+ +
Sbjct: 143 SSTLKNF--DILISTPLRLVTAIKENAIQLDKQVYRILVRHLVLDEADKLLELG-FLEQV 199
Query: 62 DPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGS 121
D + ACS+ ++ +SLFSAT+P +E+LAR+IM D +R+IVG K A+E+I QKL+F G
Sbjct: 200 DEIFAACSSTTLQKSLFSATMPSGIEQLARTIMKDPIRIIVGCKEGATETINQKLMFVGQ 259
Query: 122 EEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
EEGKL+A+RQ E L PPVLIFVQS DRAKEL+ EL +D I V+HS+ +QTQ
Sbjct: 260 EEGKLIAMRQLIQEGLRPPVLIFVQSIDRAKELFHELVYDGINVDVMHSERTQTQ 314
>gi|384487383|gb|EIE79563.1| hypothetical protein RO3G_04268 [Rhizopus delemar RA 99-880]
Length = 546
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/168 (54%), Positives = 121/168 (72%), Gaps = 1/168 (0%)
Query: 9 TDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKAC 68
T S+ DIL++TPLRL AI+ K++DLS V +LVLDEADKL + G L D + AC
Sbjct: 255 TPESRQKFDILVTTPLRLVYAIKEKEVDLSAVRHLVLDEADKLLDQG-FLDQTDEIFAAC 313
Query: 69 SNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLA 128
S+ +I +SLFSAT VEELA+S+M D +R+++G KN A+++IKQ+L+F G+E GK +A
Sbjct: 314 SSTTIQKSLFSATFSSHVEELAKSVMKDPIRIVIGAKNAATDTIKQELLFTGTEAGKRIA 373
Query: 129 LRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
LRQ + L PPVLIFVQS DRAKEL+ EL FD I VIHSD ++ Q
Sbjct: 374 LRQLIQKGLKPPVLIFVQSIDRAKELFHELVFDGINVEVIHSDRTKAQ 421
>gi|308801667|ref|XP_003078147.1| DEAD/DEAH box helicase, putative (ISS) [Ostreococcus tauri]
gi|116056598|emb|CAL52887.1| DEAD/DEAH box helicase, putative (ISS) [Ostreococcus tauri]
Length = 418
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/173 (52%), Positives = 128/173 (73%), Gaps = 2/173 (1%)
Query: 5 LVRSTDLSKFS-CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDP 63
L ++T + FS D++++TP+RL++ ++ KI+LS+V YLVLDEADKLFE+G ++ ID
Sbjct: 222 LSKATAGNDFSKVDVVVATPMRLKILLQDDKINLSKVLYLVLDEADKLFEMG-FVEQIDA 280
Query: 64 VVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEE 123
VV AC N I R+LFSATLP+ VEELARS+M +R+ VG +N+AS +I Q++VF G E
Sbjct: 281 VVAACDNKKITRALFSATLPEKVEELARSVMPRPIRLTVGERNSASSTIAQRMVFCGHEA 340
Query: 124 GKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
GKL+ALRQ + + PPV+IF QSKDRAK L EL D + G+IH+++S T+
Sbjct: 341 GKLMALRQIIRDGIKPPVIIFTQSKDRAKVLAKELTGDGLHIGLIHAEMSDTK 393
>gi|255075181|ref|XP_002501265.1| predicted protein [Micromonas sp. RCC299]
gi|226516529|gb|ACO62523.1| predicted protein [Micromonas sp. RCC299]
Length = 432
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DIL++TPLRL+ I + K+ L V YLVLDEADKLFE+G ++ +D V AC P+I R+
Sbjct: 150 DILVATPLRLKSLIEKNKVSLGAVRYLVLDEADKLFEMG-FVEQVDAAVAACDGPNITRA 208
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
LFSATLP+ VE LARS+M +R+ VG +N+AS +I Q LVF G E GKLLALRQ
Sbjct: 209 LFSATLPETVENLARSVMTQPIRLTVGERNSASGAIAQSLVFCGQERGKLLALRQLIDRG 268
Query: 137 LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ PP+++FVQSKDRAK+L EL+ D + G+IH+ +S +
Sbjct: 269 IKPPIIVFVQSKDRAKQLAKELSGDGLHLGLIHAAMSDAK 308
>gi|303286117|ref|XP_003062348.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455865|gb|EEH53167.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 458
Score = 175 bits (443), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 80/160 (50%), Positives = 120/160 (75%), Gaps = 1/160 (0%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
D+L++TPLRL+ I ++K +LS VE+LVLDEADKLFE+G ++ +D V AC P + R+
Sbjct: 121 DVLVATPLRLKSLIEKRKCNLSFVEFLVLDEADKLFEMG-FVEQVDAAVAACDGPRVTRA 179
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
LFSATLP+ VE+LARS+M +R+ VG +N+A+ +I Q+L+F G E GK+LALRQ ++
Sbjct: 180 LFSATLPETVEQLARSVMTSPMRLTVGERNSANATIAQRLLFCGRESGKMLALRQLISDG 239
Query: 137 LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ PP+++F QSKDRAK+L +L D +R G++H+ +S +
Sbjct: 240 IKPPIIVFTQSKDRAKQLAKQLQGDGLRLGLVHAGMSDAK 279
>gi|448082648|ref|XP_004195179.1| Piso0_005726 [Millerozyma farinosa CBS 7064]
gi|359376601|emb|CCE87183.1| Piso0_005726 [Millerozyma farinosa CBS 7064]
Length = 555
Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 90/171 (52%), Positives = 125/171 (73%), Gaps = 4/171 (2%)
Query: 7 RSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVK 66
++ + SK+ DILISTPLRL ++++ +DLSRVE L++DEAD+LFE G ++ D ++
Sbjct: 239 KAVNASKY--DILISTPLRLIECVKKETVDLSRVEELIVDEADRLFEEG-FVEQTDDILF 295
Query: 67 ACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 126
C+ P I +S+FSAT+P VEE+A+SIM D VRVIVG K ASE I+QKLVF G+E+GKL
Sbjct: 296 QCTYPKIRKSIFSATIPSGVEEMAQSIMRDPVRVIVGHKEAASELIQQKLVFTGNEQGKL 355
Query: 127 LALRQSFAES-LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
LA+RQ E+ PPV+IF+QS RAK L+ EL +D + VIH++ +Q Q
Sbjct: 356 LAIRQMITENEFVPPVIIFLQSITRAKALFHELIYDKLNVDVIHAERTQKQ 406
>gi|328870357|gb|EGG18732.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 734
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DILI+TP R+ I+ + + L+ VE+LV DEADKLF+ L+ +D V+ AC N S+
Sbjct: 368 DILITTPQRIVNLIQSRVVKLNHVEHLVFDEADKLFD-DQFLEQVDSVINACKNASLKIH 426
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
LFSAT+ VEE+ARSIM + ++V++G +N+AS ++ QKL+F G E+GKLLALRQ F +
Sbjct: 427 LFSATMNVVVEEMARSIMKNPIKVLIGSQNSASINVDQKLLFVGKEDGKLLALRQLFQKG 486
Query: 137 LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L PP+LIFVQSK+RA EL+ EL FD+I VIHSD +Q Q
Sbjct: 487 LEPPILIFVQSKERATELFQELIFDNINVDVIHSDRTQQQ 526
>gi|448087199|ref|XP_004196272.1| Piso0_005726 [Millerozyma farinosa CBS 7064]
gi|359377694|emb|CCE86077.1| Piso0_005726 [Millerozyma farinosa CBS 7064]
Length = 552
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/171 (52%), Positives = 125/171 (73%), Gaps = 4/171 (2%)
Query: 7 RSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVK 66
++ + SK+ DILISTPLRL ++++ +DLSRVE L++DEAD+LFE G ++ D ++
Sbjct: 236 KAVNASKY--DILISTPLRLIECVKKETVDLSRVEELIVDEADRLFEEG-FVEQTDDILF 292
Query: 67 ACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 126
C+ P I +S+FSAT+P VEE+A+SIM D VRVIVG K ASE I+Q+LVF G+E+GKL
Sbjct: 293 QCTYPKIRKSIFSATIPSGVEEMAQSIMRDPVRVIVGHKEAASELIQQRLVFTGNEQGKL 352
Query: 127 LALRQSFAES-LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
LA+RQ E+ PPV+IF+QS RAK L+ EL +D + VIH++ +Q Q
Sbjct: 353 LAIRQMITENEFVPPVIIFLQSITRAKALFHELIYDKLNVDVIHAERTQKQ 403
>gi|388578850|gb|EIM19183.1| DEAD-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 430
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 85/161 (52%), Positives = 121/161 (75%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DILISTPLRL+ AI +++DLS V +L+LDEAD+L E+G + +D +V ACS+ SI +S
Sbjct: 109 DILISTPLRLKHAIETEEVDLSNVRHLILDEADRLLEMG-FIDQVDTIVGACSHSSIRKS 167
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF-AE 135
LF+ATLP VEE++++I+ VR+I+GRK+ A++ ++QKL++ G E+GKLLA+RQ A
Sbjct: 168 LFTATLPASVEEVSQNILRMPVRMIIGRKDAAAKGVQQKLMYVGREDGKLLAVRQLVQAG 227
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L PPVLIFVQS +RA EL+ EL +D +R VIH + + Q
Sbjct: 228 ELKPPVLIFVQSVERANELFNELVYDGVRVDVIHGERTAAQ 268
>gi|167534955|ref|XP_001749152.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772305|gb|EDQ85958.1| predicted protein [Monosiga brevicollis MX1]
Length = 543
Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 124/174 (71%), Gaps = 1/174 (0%)
Query: 3 KELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHID 62
K L++ T + DIL++TP+RL A++ K +DLS V +LV+DEAD+LFE G + ID
Sbjct: 213 KVLLKLTWCMRARPDILVATPMRLVHALQHKLVDLSAVRWLVVDEADRLFENG-FEQQID 271
Query: 63 PVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSE 122
V+ ACS+ +LFSAT+P+ VE LA++++HD VR++VG N A++ ++Q+L F GSE
Sbjct: 272 EVIAACSHKKRRIALFSATMPERVETLAQTVLHDYVRIVVGAANAANQDVEQELKFVGSE 331
Query: 123 EGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
EGK+ A+RQ L PPVLIFVQSK RA++L+ EL ++++ VIH+D +Q Q
Sbjct: 332 EGKMTAIRQMLQTGLQPPVLIFVQSKSRAQQLFEELVYENVNVDVIHADRTQQQ 385
>gi|428174311|gb|EKX43208.1| hypothetical protein GUITHDRAFT_158075 [Guillardia theta CCMP2712]
Length = 464
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 114/160 (71%), Gaps = 1/160 (0%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
D+++STP RL +++K +DLS VE L++DEADKLFE G + +D ++ ACSN + +S
Sbjct: 161 DVVVSTPARLVSLLQQKSLDLSSVELLIVDEADKLFEEG-FITQLDEILAACSNRKLQKS 219
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
LFSAT+P +EELARSIM V VG K A+ IKQKLVF GSEEGKL+A+RQ
Sbjct: 220 LFSATIPPQIEELARSIMPHPTFVTVGSKVGANSKIKQKLVFVGSEEGKLIAIRQLIQTG 279
Query: 137 LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L PPVL+FVQS DRAK+L+ EL +D I V+H++ +Q Q
Sbjct: 280 LKPPVLMFVQSIDRAKQLFRELVYDGINVDVMHAERTQAQ 319
>gi|164659482|ref|XP_001730865.1| hypothetical protein MGL_1864 [Malassezia globosa CBS 7966]
gi|159104763|gb|EDP43651.1| hypothetical protein MGL_1864 [Malassezia globosa CBS 7966]
Length = 557
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 123/170 (72%), Gaps = 2/170 (1%)
Query: 8 STDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKA 67
S + K DILI+TPLRL +I +++DLS+VE LVLDEAD+L E+G L+ D ++ A
Sbjct: 232 SDSIKKKKFDILITTPLRLVHSIEHEELDLSQVELLVLDEADRLLELG-FLEQTDAILAA 290
Query: 68 CSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLL 127
C+NPS+ ++LFSATLP VEELA++ M D RV+VG+K++A+ +I+Q+L F GSE+GKL
Sbjct: 291 CTNPSLRKALFSATLPAGVEELAKTFMVDECRVLVGQKDSATATIEQRLEFTGSEDGKLH 350
Query: 128 ALRQSF-AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
ALR A + PPVL+FVQS RA+EL+ EL +D + VIHS+ + Q
Sbjct: 351 ALRALIQAGGMQPPVLLFVQSIQRARELFHELVYDGLHVDVIHSERPKAQ 400
>gi|126275853|ref|XP_001386913.1| predicted protein [Scheffersomyces stipitis CBS 6054]
gi|146325686|sp|A3GHW9.1|ROK1_PICST RecName: Full=ATP-dependent RNA helicase ROK1
gi|126212782|gb|EAZ62890.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 558
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 115/161 (71%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DI++STPLRL ++ +K+DLS+VE LV+DEADKLF+ G ++ D ++ C+ I +S
Sbjct: 247 DIIVSTPLRLIDIVKNEKVDLSKVEQLVIDEADKLFDQG-FVEQTDDILSHCTYTKIRKS 305
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSAT+P VEE+A SIM D +RVI+GRK AS +I QKLVF GSEEGKLLA+RQ E
Sbjct: 306 MFSATIPSGVEEMAHSIMRDPIRVIIGRKEAASNTIDQKLVFTGSEEGKLLAIRQMIQEG 365
Query: 137 -LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
PP++IF+QS RAK L+ EL +D + VIH++ + Q
Sbjct: 366 EFKPPIIIFLQSIHRAKALFHELLYDKLNVDVIHAERTPKQ 406
>gi|45187850|ref|NP_984073.1| ADL024Cp [Ashbya gossypii ATCC 10895]
gi|74694371|sp|Q75AE1.1|ROK1_ASHGO RecName: Full=ATP-dependent RNA helicase ROK1
gi|44982634|gb|AAS51897.1| ADL024Cp [Ashbya gossypii ATCC 10895]
gi|374107288|gb|AEY96196.1| FADL024Cp [Ashbya gossypii FDAG1]
Length = 569
Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 85/161 (52%), Positives = 118/161 (73%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DI+ISTPLRL ++ + +DLS V+YL+ DEADKLF+ ++ D ++ ACS+P+I +
Sbjct: 253 DIIISTPLRLIDIVKSESLDLSAVKYLIFDEADKLFD-KTFVEQTDDILSACSHPNISKV 311
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
LFSATLP VEELA+SIM D VRVI+G K A+ +I+QKLVF G+EEGKL+A+RQ E
Sbjct: 312 LFSATLPSSVEELAQSIMTDPVRVIIGHKEAANTNIEQKLVFCGNEEGKLVAIRQLIQEG 371
Query: 137 L-NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ PPV+IF++S RAK L+ EL +D + VIH++ +Q Q
Sbjct: 372 MFRPPVIIFLESITRAKALFHELLYDKLNVDVIHAERTQVQ 412
>gi|388857203|emb|CCF49216.1| probable ROK1-ATP-dependent RNA helicase [Ustilago hordei]
Length = 593
Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 87/161 (54%), Positives = 118/161 (73%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DILI+TPLRL A+ ++++DLS V +LVLDEAD+L E G L+ D ++ ACS+P + ++
Sbjct: 285 DILITTPLRLVHAVEKEEVDLSNVRHLVLDEADRLLEDG-FLEQTDSILAACSHPHLRKA 343
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
LFSATLP VEE+A++ M D RVIVG K++A+E+IKQ+L F GSE+GKL ALR E
Sbjct: 344 LFSATLPAAVEEMAKTFMIDECRVIVGTKDSATETIKQELQFVGSEDGKLHALRSLIQEG 403
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L PPVL+FVQS RAK+L+ EL +D + VIHS+ + Q
Sbjct: 404 GLKPPVLLFVQSIQRAKDLFHELVYDGLHLDVIHSERPKVQ 444
>gi|254571881|ref|XP_002493050.1| ATP-dependent RNA helicase of the DEAD box family [Komagataella
pastoris GS115]
gi|238032848|emb|CAY70871.1| ATP-dependent RNA helicase of the DEAD box family [Komagataella
pastoris GS115]
gi|328352938|emb|CCA39336.1| ATP-dependent RNA helicase [Komagataella pastoris CBS 7435]
Length = 544
Score = 164 bits (416), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 85/161 (52%), Positives = 113/161 (70%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
D+++STPLRL +R KIDL V++LVLDEADKLF L+ D V+ CSNP + S
Sbjct: 240 DVMVSTPLRLIEVVRMGKIDLREVKHLVLDEADKLF-APEFLEQTDDVLHNCSNPKLQMS 298
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
++SAT+P+ VEELA S+M + +R+ +GRK A+ IKQK+V+ GSEEGKL+ALRQ S
Sbjct: 299 IYSATIPEEVEELAHSVMKEPIRINIGRKEAANTQIKQKVVYTGSEEGKLVALRQMVQNS 358
Query: 137 -LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
PPVLIF+QS RAK L+ EL +D + VIHS+ +Q Q
Sbjct: 359 EFKPPVLIFLQSITRAKALFHELIYDKMNVDVIHSERTQIQ 399
>gi|449680655|ref|XP_002168566.2| PREDICTED: probable ATP-dependent RNA helicase DDX52-like [Hydra
magnipapillata]
Length = 585
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 112/165 (67%), Gaps = 3/165 (1%)
Query: 15 SCDILISTPLRLRLAIRRK-KIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNP 71
+CDILISTP RL +++ DL VE+LVLDE DKLFE G + + +ACSNP
Sbjct: 274 ACDILISTPNRLVHLLKQDFAPDLGIVEWLVLDEGDKLFEDGEAGFRGQVALIYQACSNP 333
Query: 72 SIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
SI R LFSATL + VE+ + + + VR+ VG +N A+++I Q+L+F G E GKLLA+RQ
Sbjct: 334 SIKRLLFSATLANSVEDWCKDHLDNVVRITVGNRNAATDTIDQELIFVGQESGKLLAIRQ 393
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ PP+L+FVQSKDRAKEL+ EL +D + VIHSD +Q Q
Sbjct: 394 ILHKGFQPPILVFVQSKDRAKELFNELVYDGLNVDVIHSDRTQAQ 438
>gi|406607780|emb|CCH40885.1| ATP-dependent RNA helicase [Wickerhamomyces ciferrii]
Length = 559
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/167 (48%), Positives = 116/167 (69%), Gaps = 2/167 (1%)
Query: 11 LSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN 70
+ K DI+ISTPLRL ++ + +DLS+VE+L+ DEADKLF+ N L+ D ++ C N
Sbjct: 233 IKKDKYDIIISTPLRLIDLVKNEALDLSKVEHLIFDEADKLFD-KNFLEQTDDILTQCKN 291
Query: 71 PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
P + +S+FSAT+P VEE+A IM + +R+I+G K A++ I+QKL F G+EEGKL+A+R
Sbjct: 292 PRLRKSMFSATIPSNVEEIANQIMQNTIRLIIGHKEAANQQIEQKLTFCGNEEGKLIAIR 351
Query: 131 QSFAES-LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
Q E PPVLIF+QS RAK L+ EL +D + VIH++ +Q Q
Sbjct: 352 QLIQEGEFKPPVLIFLQSITRAKALFHELLYDRLNVDVIHAERTQIQ 398
>gi|354545812|emb|CCE42540.1| hypothetical protein CPAR2_201830 [Candida parapsilosis]
Length = 568
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 113/161 (70%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DI++STPLRL ++ +KIDLS+VE LV+DEADKLF+ G + D ++ +NP I +S
Sbjct: 261 DIIVSTPLRLIDIVKNEKIDLSKVEQLVIDEADKLFDHG-FAEQTDEILNHLTNPKIRKS 319
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSAT+P VEE+A SIM D +RVI+G K AS +I QKLVF G+EEGKLLA+RQ
Sbjct: 320 MFSATIPSGVEEMAHSIMKDPIRVIIGHKEAASTTIDQKLVFTGNEEGKLLAIRQMVQNG 379
Query: 137 -LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
PP++IF+QS RAK L+ EL +D + VIH++ + Q
Sbjct: 380 EFKPPIIIFLQSITRAKALFHELVYDKLNVDVIHAERTPKQ 420
>gi|443900149|dbj|GAC77476.1| ATP-dependent RNA helicase [Pseudozyma antarctica T-34]
Length = 586
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 118/161 (73%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
D+LI+TPLRL A+ ++++DL V +LVLDEAD+L E G L+ D ++ ACS+P + ++
Sbjct: 271 DVLITTPLRLVHAVEKEEVDLGNVRHLVLDEADRLLEDG-FLEQTDAILAACSHPELRKA 329
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF-AE 135
LFSATLP VEE+A++ M D RVIVG K++A+E+I+Q+L F GSE+GKL ALR A
Sbjct: 330 LFSATLPAGVEEMAKTFMVDECRVIVGTKDSATETIRQELQFVGSEDGKLHALRSLMQAG 389
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L PPVL+FVQS +RAK+L+ EL +D + VIHS+ + Q
Sbjct: 390 GLKPPVLLFVQSIERAKDLFHELVYDGLHVDVIHSERPKLQ 430
>gi|330790576|ref|XP_003283372.1| hypothetical protein DICPUDRAFT_6001 [Dictyostelium purpureum]
gi|325086637|gb|EGC40023.1| hypothetical protein DICPUDRAFT_6001 [Dictyostelium purpureum]
Length = 462
Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 85/171 (49%), Positives = 117/171 (68%), Gaps = 2/171 (1%)
Query: 7 RSTDLSKF-SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVV 65
+STD S + DILI+TPLRL I+ + L+ VEYLV DEADKLF+ + ++ ID VV
Sbjct: 161 QSTDESLIKNYDILITTPLRLVYLIKENVLKLNNVEYLVFDEADKLFD-RDFVEQIDDVV 219
Query: 66 KACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK 125
AC N + LFSAT+ VEELA SIM + +++ +G +N A+ ++ QKL++ G EEGK
Sbjct: 220 TACQNQKLKICLFSATMNTLVEELANSIMKNPIKITIGEENAAAVTVDQKLIYVGREEGK 279
Query: 126 LLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L+A+RQ + L PP+LIF QSK+RA +L+ EL FD I VIHS+ +Q Q
Sbjct: 280 LMAVRQLIQKGLEPPILIFTQSKERAHDLFQELVFDGINVDVIHSERTQFQ 330
>gi|71021341|ref|XP_760901.1| hypothetical protein UM04754.1 [Ustilago maydis 521]
gi|46100997|gb|EAK86230.1| hypothetical protein UM04754.1 [Ustilago maydis 521]
Length = 1448
Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 119/161 (73%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
D+LI+TPLRL AI +++++LS V +LVLDEAD+L E G L+ D ++ ACS+P + ++
Sbjct: 1122 DVLITTPLRLVHAIEKEQVELSNVRHLVLDEADRLLEDG-FLQQTDSILAACSHPQLRKA 1180
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
LFSATLP VEE+A++ M D RVIVG K++A+E+I+Q+L F GSE+GKL ALR +
Sbjct: 1181 LFSATLPAGVEEMAKTFMIDECRVIVGTKDSATETIQQELQFVGSEDGKLHALRSLILQG 1240
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L PPVL+FVQS +RAK+L+ EL +D + VIHS+ + Q
Sbjct: 1241 GLKPPVLLFVQSIERAKDLFHELVYDGLHVDVIHSERPKLQ 1281
>gi|294657726|ref|XP_460025.2| DEHA2E16632p [Debaryomyces hansenii CBS767]
gi|218511815|sp|Q6BP45.2|ROK1_DEBHA RecName: Full=ATP-dependent RNA helicase ROK1
gi|199432904|emb|CAG88281.2| DEHA2E16632p [Debaryomyces hansenii CBS767]
Length = 550
Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 115/161 (71%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DIL+STPLRL +I+ + I LS+VE LV+DE DKLF+ G ++ D ++ C+N + +S
Sbjct: 240 DILVSTPLRLIDSIKNETISLSKVEQLVIDETDKLFDQG-FVEQTDEILSNCTNTKLRKS 298
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSAT+P VEE+A+SIM D +RVI+G K AS +I+QKLVF G+EEGKLLA+RQ +
Sbjct: 299 MFSATIPSGVEEMAQSIMKDPIRVIIGHKEAASNTIEQKLVFTGNEEGKLLAIRQMIQQG 358
Query: 137 -LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
PP++IF+QS RAK L+ EL +D + VIH++ + Q
Sbjct: 359 EFKPPIIIFLQSITRAKALFHELLYDRLNVDVIHAERTPKQ 399
>gi|66820759|ref|XP_643949.1| hypothetical protein DDB_G0274325 [Dictyostelium discoideum AX4]
gi|74927179|sp|Q86IZ9.1|DDX52_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx52; AltName:
Full=DEAD box protein 52
gi|60472102|gb|EAL70055.1| hypothetical protein DDB_G0274325 [Dictyostelium discoideum AX4]
Length = 668
Score = 162 bits (409), Expect = 7e-38, Method: Composition-based stats.
Identities = 83/160 (51%), Positives = 112/160 (70%), Gaps = 1/160 (0%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DILI+TPLRL I+ + L++VEYLV DEADKLF+ N + +D VV AC NP +
Sbjct: 320 DILITTPLRLVYLIKENLLSLNKVEYLVFDEADKLFD-KNFQEQVDIVVTACQNPKLKIC 378
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
LFSAT+ VEEL SIM + +++I+G +N A+ ++ QKL++ G EEGKLLA+RQ +
Sbjct: 379 LFSATMNQQVEELGHSIMKNPIKIIIGEQNAAAITVDQKLIYVGKEEGKLLAVRQLIQKG 438
Query: 137 LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L PP+LIF QSK+RA +L+ EL FD I VIHS+ +Q Q
Sbjct: 439 LEPPILIFTQSKERAHDLFQELIFDGINVDVIHSERTQFQ 478
>gi|156836663|ref|XP_001642382.1| hypothetical protein Kpol_274p7 [Vanderwaltozyma polyspora DSM
70294]
gi|160358656|sp|A7TT88.1|ROK1_VANPO RecName: Full=ATP-dependent RNA helicase ROK1
gi|156112896|gb|EDO14524.1| hypothetical protein Kpol_274p7 [Vanderwaltozyma polyspora DSM
70294]
Length = 570
Score = 161 bits (408), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 123/172 (71%), Gaps = 2/172 (1%)
Query: 6 VRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVV 65
+R+ +S DI++STPLRL ++ + +DLS+V++L+ DEADKLF+ ++ D ++
Sbjct: 249 LRNKVISDKKYDIIVSTPLRLIDVVKNEALDLSQVKHLIFDEADKLFD-KTFVEQSDDIL 307
Query: 66 KACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK 125
+CS+ S+ +S+FSAT+P VEE+A+SIM D VRVI+G K A+ SI+QKLVF G+EEGK
Sbjct: 308 SSCSHSSLRKSMFSATIPSNVEEIAKSIMMDPVRVIIGHKEAANTSIEQKLVFCGNEEGK 367
Query: 126 LLALRQSFAES-LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L+A++Q E PPV+IF++S RAK LY E+ +D + VIH++ +Q Q
Sbjct: 368 LIAIKQLVQEGEFKPPVIIFLESITRAKALYHEMMYDSLNVDVIHAERTQVQ 419
>gi|68490782|ref|XP_710786.1| potential DEAD box RNA helicase [Candida albicans SC5314]
gi|68490809|ref|XP_710773.1| potential DEAD box RNA helicase [Candida albicans SC5314]
gi|46432016|gb|EAK91525.1| potential DEAD box RNA helicase [Candida albicans SC5314]
gi|46432030|gb|EAK91538.1| potential DEAD box RNA helicase [Candida albicans SC5314]
Length = 496
Score = 161 bits (408), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 78/161 (48%), Positives = 114/161 (70%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DI++STPLRL +++ +DLS++E L++DEADKLF+ G + D ++ C+NP I +S
Sbjct: 175 DIIVSTPLRLIDVVKQGNMDLSKIEQLIIDEADKLFDHG-FAEQTDEILTHCTNPKIRKS 233
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSAT+P VEE+A SIM D +R+I+G K AS +I QKLVF G+E+GKLLA+RQ +
Sbjct: 234 IFSATIPSSVEEMAHSIMKDPLRIIIGHKEAASNTIDQKLVFTGNEQGKLLAIRQMIQQG 293
Query: 137 -LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
PP++IF+QS RAK L+ EL +D + VIH++ + Q
Sbjct: 294 EFKPPIIIFLQSITRAKALFHELLYDRLNVDVIHAERTPKQ 334
>gi|358058184|dbj|GAA95976.1| hypothetical protein E5Q_02634 [Mixia osmundae IAM 14324]
Length = 498
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 121/165 (73%), Gaps = 3/165 (1%)
Query: 14 FSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI 73
+ D+LI+TPLRL AI+ K +DLS VE+L+LDEAD+LFE+ N L+ D ++ AC++P +
Sbjct: 211 LTADLLITTPLRLIYAIKAKTVDLSTVEHLILDEADRLFEL-NFLEQTDELIAACNHPKL 269
Query: 74 VRSLFSATLPDFVEELARSIM-HDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
++LFSAT+P VE LA++IM DA RVIVG +++ + I Q+L F GSE+GKL +LR
Sbjct: 270 RKALFSATIPSGVELLAKTIMREDAARVIVGSRDSGAAGITQQLTFVGSEDGKLASLRSL 329
Query: 133 FAE-SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
A+ L+PPVLIF QS +RA++LY EL+ D + V+HSD S+ +
Sbjct: 330 IAKGGLSPPVLIFTQSIERAQDLYRELSRDGLPVEVVHSDRSKEE 374
>gi|238878350|gb|EEQ41988.1| ATP-dependent RNA helicase ROK1 [Candida albicans WO-1]
Length = 640
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/161 (47%), Positives = 114/161 (70%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DI++STPLRL +++ +DLS++E L++DEADKLF+ G + D ++ C+NP I +S
Sbjct: 319 DIIVSTPLRLIDVVKQGNMDLSKIEQLIIDEADKLFDHG-FAEQTDEILTHCTNPKIRKS 377
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSAT+P VEE+A SIM D +R+I+G K AS +I QKLVF G+E+GKLLA+RQ +
Sbjct: 378 IFSATIPSSVEEMAHSIMKDPLRIIIGHKEAASNTIDQKLVFTGNEQGKLLAIRQMIQQG 437
Query: 137 -LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
PP++IF+QS RAK L+ EL +D + V+H++ + Q
Sbjct: 438 EFKPPIIIFLQSITRAKALFHELLYDRLNVDVVHAERTPKQ 478
>gi|149239430|ref|XP_001525591.1| ATP-dependent RNA helicase ROK1 [Lodderomyces elongisporus NRRL
YB-4239]
gi|152060503|sp|A5E1N2.1|ROK1_LODEL RecName: Full=ATP-dependent RNA helicase ROK1
gi|146451084|gb|EDK45340.1| ATP-dependent RNA helicase ROK1 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 553
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/171 (50%), Positives = 117/171 (68%), Gaps = 3/171 (1%)
Query: 8 STDLSKFS-CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVK 66
S D+ K S DIL+STPLRL ++ K+DLS+V LV+DEADKLF+ G + D ++
Sbjct: 235 SNDVVKASKYDILVSTPLRLIDVVKLGKVDLSKVTQLVIDEADKLFDHG-FAEQTDELLS 293
Query: 67 ACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 126
C+N I +S+FSAT+P VEE+A SIM D +RVI+G K AS +I+QKLVF G+EEGKL
Sbjct: 294 HCTNVKIRKSMFSATIPSGVEEMAHSIMKDPIRVIIGHKEAASNTIEQKLVFTGNEEGKL 353
Query: 127 LALRQSFAES-LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
LA+RQ PP++IF+QS RAK L+ EL +D + VIH++ + Q
Sbjct: 354 LAIRQMIQNGEFKPPIIIFLQSITRAKALFHELVYDKLNVDVIHAERTPKQ 404
>gi|152060505|sp|A5DIX5.2|ROK1_PICGU RecName: Full=ATP-dependent RNA helicase ROK1
Length = 537
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 115/161 (71%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
D+LI TPLRL ++++++DLS+VE+LV+DEADKLF+ G ++ D ++ C+ P+ S
Sbjct: 231 DVLICTPLRLIDLVKKEQVDLSKVEHLVIDEADKLFDHG-FVEQTDEILSHCTLPTRRTS 289
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSAT+P VEE+A SIM D +R+IVG K AS SI QKLVF G+EEGKLLA+RQ +
Sbjct: 290 MFSATIPSGVEEMANSIMKDQIRIIVGHKEGASTSIDQKLVFTGNEEGKLLAIRQMVQQG 349
Query: 137 -LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
PP++IF+QS RAK L+ EL +D + VIH++ + Q
Sbjct: 350 EFKPPIIIFLQSIPRAKALFHELIYDKLNVEVIHAERTPKQ 390
>gi|190346939|gb|EDK39127.2| hypothetical protein PGUG_03226 [Meyerozyma guilliermondii ATCC
6260]
Length = 676
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 115/161 (71%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
D+LI TPLRL ++++++DLS+VE+LV+DEADKLF+ G ++ D ++ C+ P+ S
Sbjct: 370 DVLICTPLRLIDLVKKEQVDLSKVEHLVIDEADKLFDHG-FVEQTDEILSHCTLPTRRTS 428
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSAT+P VEE+A SIM D +R+IVG K AS SI QKLVF G+EEGKLLA+RQ +
Sbjct: 429 MFSATIPSGVEEMANSIMKDQIRIIVGHKEGASTSIDQKLVFTGNEEGKLLAIRQMVQQG 488
Query: 137 -LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
PP++IF+QS RAK L+ EL +D + VIH++ + Q
Sbjct: 489 EFKPPIIIFLQSIPRAKALFHELIYDKLNVEVIHAERTPKQ 529
>gi|146419062|ref|XP_001485496.1| hypothetical protein PGUG_03226 [Meyerozyma guilliermondii ATCC
6260]
Length = 676
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 115/161 (71%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
D+LI TPLRL ++++++DLS+VE+LV+DEADKLF+ G ++ D ++ C+ P+ S
Sbjct: 370 DVLICTPLRLIDLVKKEQVDLSKVEHLVIDEADKLFDHG-FVEQTDEILSHCTLPTRRTS 428
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSAT+P VEE+A SIM D +R+IVG K AS SI QKLVF G+EEGKLLA+RQ +
Sbjct: 429 MFSATIPSGVEEMANSIMKDQIRIIVGHKEGASTSIDQKLVFTGNEEGKLLAIRQMVQQG 488
Query: 137 -LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
PP++IF+QS RAK L+ EL +D + VIH++ + Q
Sbjct: 489 EFKPPIIIFLQSIPRAKALFHELIYDKLNVEVIHAERTPKQ 529
>gi|207345469|gb|EDZ72284.1| YGL171Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 335
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 116/161 (72%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DI+ISTPLRL ++ + +DLS+V++L+ DEADKLF+ ++ D ++ AC PS+ ++
Sbjct: 32 DIIISTPLRLIDVVKNEALDLSKVKHLIFDEADKLFD-KTFVEQSDDILSACREPSLRKA 90
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSAT+P VEE+A+SIM D VRVI+G K A+ +I+QKL+F G+EEGKL+A+RQ E
Sbjct: 91 MFSATIPSNVEEIAQSIMMDPVRVIIGHKEAANTNIEQKLIFCGNEEGKLIAIRQLVQEG 150
Query: 137 -LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
PP++IF++S RAK LY EL +D I VIH++ + Q
Sbjct: 151 EFKPPIIIFLESITRAKALYHELMYDRINVDVIHAERTALQ 191
>gi|241950191|ref|XP_002417818.1| ATP-dependent DEAD-box RNA helicase, putative [Candida dubliniensis
CD36]
gi|223641156|emb|CAX45533.1| ATP-dependent DEAD-box RNA helicase, putative [Candida dubliniensis
CD36]
Length = 563
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 78/161 (48%), Positives = 113/161 (70%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DI++STPLRL +++ +DLS++E L++DEADKLF+ G + D ++ C NP I +S
Sbjct: 251 DIIVSTPLRLIDVVKQGNMDLSKIEQLIIDEADKLFDHG-FAEQTDEILTHCINPKIRKS 309
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSAT+P VEE+A SIM D +R+I+G K AS +I QKLVF G+E+GKLLA+RQ +
Sbjct: 310 IFSATIPSSVEEMAHSIMKDPLRIIIGHKEAASNTIDQKLVFTGNEQGKLLAIRQMIQQG 369
Query: 137 -LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
PP++IF+QS RAK L+ EL +D + VIH++ + Q
Sbjct: 370 EFKPPIIIFLQSITRAKALFHELLYDRLNVDVIHAERTPKQ 410
>gi|50291793|ref|XP_448329.1| hypothetical protein [Candida glabrata CBS 138]
gi|74661150|sp|Q6FN65.1|ROK1_CANGA RecName: Full=ATP-dependent RNA helicase ROK1
gi|49527641|emb|CAG61290.1| unnamed protein product [Candida glabrata]
Length = 565
Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 79/172 (45%), Positives = 121/172 (70%), Gaps = 2/172 (1%)
Query: 6 VRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVV 65
+R+ +S D++ISTPLRL ++ + +DLS V++L+ DEADKLF+ ++ D ++
Sbjct: 242 LRNKVISDKKYDLIISTPLRLIDVVKNEALDLSNVKHLIFDEADKLFD-KTFIEQTDDIL 300
Query: 66 KACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK 125
+C++PS+ +S+FSAT+P VEE A SIM+D VRVI+G K A+ +I+QKL+F G+EEGK
Sbjct: 301 NSCTDPSMRKSMFSATIPSSVEETANSIMNDPVRVIIGHKEAANTNIEQKLIFCGNEEGK 360
Query: 126 LLALRQSFAES-LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L+A+RQ + PP++IF++S RAK LY EL +D I VIH++ + Q
Sbjct: 361 LIAIRQLVQQGEFKPPIIIFLESIARAKALYHELMYDRINVDVIHAERTAIQ 412
>gi|363756464|ref|XP_003648448.1| hypothetical protein Ecym_8358 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891648|gb|AET41631.1| Hypothetical protein Ecym_8358 [Eremothecium cymbalariae
DBVPG#7215]
Length = 569
Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 78/161 (48%), Positives = 116/161 (72%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DI++STPLRL ++ + +DLS V++L+ DEADKLF+ L+ D ++ +CSN + +S
Sbjct: 246 DIIVSTPLRLIDLVKERALDLSCVKHLIFDEADKLFD-KTFLEQTDDILSSCSNNKLQKS 304
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSAT+P VEE+A+SIM D +R+I+G K A+ +I+QKLVF G+EEGKL+A+RQ E
Sbjct: 305 MFSATIPSHVEEIAQSIMMDPIRIIIGHKEAANTNIEQKLVFCGNEEGKLIAIRQLIMEG 364
Query: 137 -LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
PPV+IF++S RAK L+ EL +D + VIH++ +Q Q
Sbjct: 365 EFRPPVIIFLESITRAKALFHELVYDKLNVDVIHAERTQMQ 405
>gi|6321267|ref|NP_011344.1| RNA-dependent ATPase ROK1 [Saccharomyces cerevisiae S288c]
gi|1173121|sp|P45818.1|ROK1_YEAST RecName: Full=ATP-dependent RNA helicase ROK1; AltName:
Full=Rescuer of KEM1 protein 1
gi|607182|emb|CAA84384.1| ATP-dependent RNA helicase [Saccharomyces cerevisiae]
gi|971382|emb|CAA59758.1| putative ATP dependent RNA helicase [Saccharomyces cerevisiae]
gi|1322774|emb|CAA96883.1| ROK1 [Saccharomyces cerevisiae]
gi|285812042|tpg|DAA07942.1| TPA: RNA-dependent ATPase ROK1 [Saccharomyces cerevisiae S288c]
gi|392299579|gb|EIW10673.1| Rok1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 564
Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 116/161 (72%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DI+ISTPLRL ++ + +DLS+V++L+ DEADKLF+ ++ D ++ AC PS+ ++
Sbjct: 251 DIIISTPLRLIDVVKNEALDLSKVKHLIFDEADKLFD-KTFVEQSDDILSACREPSLRKA 309
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSAT+P VEE+A+SIM D VRVI+G K A+ +I+QKL+F G+EEGKL+A+RQ E
Sbjct: 310 MFSATIPSNVEEIAQSIMMDPVRVIIGHKEAANTNIEQKLIFCGNEEGKLIAIRQLVQEG 369
Query: 137 -LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
PP++IF++S RAK LY EL +D I VIH++ + Q
Sbjct: 370 EFKPPIIIFLESITRAKALYHELMYDRINVDVIHAERTALQ 410
>gi|349578061|dbj|GAA23227.1| K7_Rok1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 564
Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 116/161 (72%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DI+ISTPLRL ++ + +DLS+V++L+ DEADKLF+ ++ D ++ AC PS+ ++
Sbjct: 251 DIIISTPLRLIDVVKNEALDLSKVKHLIFDEADKLFD-KTFVEQSDDILSACREPSLRKA 309
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSAT+P VEE+A+SIM D VRVI+G K A+ +I+QKL+F G+EEGKL+A+RQ E
Sbjct: 310 MFSATIPSNVEEIAQSIMMDPVRVIIGHKEAANTNIEQKLIFCGNEEGKLIAIRQLVQEG 369
Query: 137 -LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
PP++IF++S RAK LY EL +D I VIH++ + Q
Sbjct: 370 EFKPPIIIFLESITRAKALYHELMYDRINVDVIHAERTALQ 410
>gi|160358657|sp|A6ZU15.1|ROK1_YEAS7 RecName: Full=ATP-dependent RNA helicase ROK1; AltName:
Full=Rescuer of KEM1 protein 1
gi|151943643|gb|EDN61953.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190407114|gb|EDV10381.1| ATP-dependent RNA helicase ROK1 [Saccharomyces cerevisiae RM11-1a]
gi|256272243|gb|EEU07234.1| Rok1p [Saccharomyces cerevisiae JAY291]
gi|259146339|emb|CAY79596.1| Rok1p [Saccharomyces cerevisiae EC1118]
gi|323348686|gb|EGA82928.1| Rok1p [Saccharomyces cerevisiae Lalvin QA23]
gi|365765777|gb|EHN07283.1| Rok1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 564
Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 116/161 (72%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DI+ISTPLRL ++ + +DLS+V++L+ DEADKLF+ ++ D ++ AC PS+ ++
Sbjct: 251 DIIISTPLRLIDVVKNEALDLSKVKHLIFDEADKLFD-KTFVEQSDDILSACREPSLRKA 309
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSAT+P VEE+A+SIM D VRVI+G K A+ +I+QKL+F G+EEGKL+A+RQ E
Sbjct: 310 MFSATIPSNVEEIAQSIMMDPVRVIIGHKEAANTNIEQKLIFCGNEEGKLIAIRQLVQEG 369
Query: 137 -LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
PP++IF++S RAK LY EL +D I VIH++ + Q
Sbjct: 370 EFKPPIIIFLESITRAKALYHELMYDRINVDVIHAERTALQ 410
>gi|323309141|gb|EGA62368.1| Rok1p [Saccharomyces cerevisiae FostersO]
Length = 496
Score = 158 bits (400), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 116/161 (72%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DI+ISTPLRL ++ + +DLS+V++L+ DEADKLF+ ++ D ++ AC PS+ ++
Sbjct: 251 DIIISTPLRLIDVVKNEALDLSKVKHLIFDEADKLFD-KTFVEQSDDILSACREPSLRKA 309
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSAT+P VEE+A+SIM D VRVI+G K A+ +I+QKL+F G+EEGKL+A+RQ E
Sbjct: 310 MFSATIPSNVEEIAQSIMMDPVRVIIGHKEAANTNIEQKLIFCGNEEGKLIAIRQLVQEG 369
Query: 137 -LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
PP++IF++S RAK LY EL +D I VIH++ + Q
Sbjct: 370 EFKPPIIIFLESITRAKALYHELMYDRINVDVIHAERTALQ 410
>gi|367015264|ref|XP_003682131.1| hypothetical protein TDEL_0F01090 [Torulaspora delbrueckii]
gi|359749793|emb|CCE92920.1| hypothetical protein TDEL_0F01090 [Torulaspora delbrueckii]
Length = 551
Score = 158 bits (400), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 76/161 (47%), Positives = 116/161 (72%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DIL++TPLRL ++ + +DLS V++++ DEADKLF+ ++ D ++ +C+NP + +S
Sbjct: 245 DILVTTPLRLIDVVKNEALDLSGVKHIIFDEADKLFD-KTFVEQTDDILSSCNNPKLRKS 303
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSAT+P VEE+A SIM D VRVI+G K+ A+ +IKQ +++ G+EEGKL+A+RQ E
Sbjct: 304 MFSATIPSNVEEIANSIMMDPVRVIIGHKDAANANIKQDVIYCGNEEGKLIAIRQLVQEG 363
Query: 137 -LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
PPV+IF++S RAK LY EL +D + VIH++ +Q Q
Sbjct: 364 EFRPPVIIFLESITRAKALYHELMYDGLNVDVIHAERTQIQ 404
>gi|401842122|gb|EJT44393.1| ROK1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 558
Score = 158 bits (400), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 78/161 (48%), Positives = 117/161 (72%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DI+ISTPLRL ++++ +DLSRV++L+ DEADKLF+ ++ D ++ AC P++ ++
Sbjct: 252 DIIISTPLRLIDVVKKEALDLSRVKHLIFDEADKLFD-KTFVEQSDDILSACKEPALRKA 310
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSAT+P VEE+A+SIM D +RVI+G K A+ +I+QKL+F G+EEGKL+A+RQ E
Sbjct: 311 MFSATIPSSVEEIAQSIMMDPIRVIIGHKEAANTNIEQKLIFCGNEEGKLIAIRQLVQEG 370
Query: 137 -LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
PP++IF++S RAK LY EL +D I VIH++ + Q
Sbjct: 371 EFKPPIIIFLESIARAKALYHELMYDRINVDVIHAERTVLQ 411
>gi|365760811|gb|EHN02500.1| Rok1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 558
Score = 158 bits (400), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 78/161 (48%), Positives = 117/161 (72%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DI+ISTPLRL ++++ +DLSRV++L+ DEADKLF+ ++ D ++ AC P++ ++
Sbjct: 252 DIIISTPLRLIDVVKKEALDLSRVKHLIFDEADKLFD-KTFVEQSDDILSACKEPALRKA 310
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSAT+P VEE+A+SIM D +RVI+G K A+ +I+QKL+F G+EEGKL+A+RQ E
Sbjct: 311 MFSATIPSSVEEIAQSIMMDPIRVIIGHKEAANTNIEQKLIFCGNEEGKLIAIRQLVQEG 370
Query: 137 -LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
PP++IF++S RAK LY EL +D I VIH++ + Q
Sbjct: 371 EFKPPIIIFLESIARAKALYHELMYDRINVDVIHAERTVLQ 411
>gi|444317483|ref|XP_004179399.1| hypothetical protein TBLA_0C00640 [Tetrapisispora blattae CBS 6284]
gi|387512440|emb|CCH59880.1| hypothetical protein TBLA_0C00640 [Tetrapisispora blattae CBS 6284]
Length = 579
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/167 (44%), Positives = 121/167 (72%), Gaps = 2/167 (1%)
Query: 11 LSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN 70
+S DI+ISTPLRL +R + +DLS+V++L+ DEADKLF+ ++ D ++ +C++
Sbjct: 252 ISNSKYDIIISTPLRLIDVVRNESLDLSKVKHLIFDEADKLFD-KTFVEQTDDILSSCTD 310
Query: 71 PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
P++ +S+FSAT+P VE++A+S+M+D VRV++G K A+ +I+QKL+F G+EEGKL+A++
Sbjct: 311 PALRKSMFSATIPSSVEDIAQSLMNDPVRVVIGHKEAANSNIEQKLIFCGNEEGKLIAIK 370
Query: 131 QSFAES-LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
Q E PPV+IF++S RAK LY E+ +D + VIH++ + Q
Sbjct: 371 QLTQEGEFKPPVIIFLESITRAKALYHEMMYDRLNVDVIHAERTTIQ 417
>gi|448525693|ref|XP_003869174.1| Chr1 DEAD-box ATP-dependent RNA helicase [Candida orthopsilosis Co
90-125]
gi|380353527|emb|CCG23037.1| Chr1 DEAD-box ATP-dependent RNA helicase [Candida orthopsilosis]
Length = 547
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/171 (48%), Positives = 117/171 (68%), Gaps = 3/171 (1%)
Query: 8 STDLSKFS-CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVK 66
+ D+ K S DI++STPLRL ++ +KIDLS+V+ LV+DEADKLF+ G + D ++
Sbjct: 230 NNDIVKASKYDIIVSTPLRLIDIVKNEKIDLSKVDQLVIDEADKLFDHG-FAEQTDEILN 288
Query: 67 ACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 126
+N I +S+FSAT+P VEE+A SIM D +RVI+G K AS +I QKL+F G+EEGKL
Sbjct: 289 HLTNTKIRKSMFSATIPSGVEEMAHSIMKDPIRVIIGHKEAASSTIDQKLIFTGNEEGKL 348
Query: 127 LALRQSFAES-LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
LA+RQ PP++IF+QS RAK L+ EL +D + VIH++ + Q
Sbjct: 349 LAIRQMVQNGEFKPPIIIFLQSITRAKALFHELVYDKLNVDVIHAERTPKQ 399
>gi|213402959|ref|XP_002172252.1| ATP-dependent RNA helicase rok1 [Schizosaccharomyces japonicus
yFS275]
gi|212000299|gb|EEB05959.1| ATP-dependent RNA helicase rok1 [Schizosaccharomyces japonicus
yFS275]
Length = 519
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/159 (50%), Positives = 112/159 (70%), Gaps = 3/159 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DI +STP+RL AI+ + L+ VE+LVLDEAD+LFE N ++ D V+ AC++P I +
Sbjct: 199 DICVSTPMRLVHAIK-SGLSLANVEFLVLDEADRLFE-KNFVEQTDGVLSACTHPRICKC 256
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
LFSATLP VEELA+++ HD +R+IVG+K+ A+ +I+QKL+F G+E KL+ RQ ++
Sbjct: 257 LFSATLPSTVEELAKTVAHDPLRIIVGQKDAATSTIEQKLLFVGNEASKLVIFRQMVSDG 316
Query: 137 -LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ P V+IFVQ DRAK LY EL FD I IH +L Q
Sbjct: 317 EIQPRVVIFVQDIDRAKALYTELMFDGIHVAAIHGELPQ 355
>gi|367000868|ref|XP_003685169.1| hypothetical protein TPHA_0D00940 [Tetrapisispora phaffii CBS 4417]
gi|357523467|emb|CCE62735.1| hypothetical protein TPHA_0D00940 [Tetrapisispora phaffii CBS 4417]
Length = 570
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/161 (46%), Positives = 118/161 (73%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DI+ISTPLRL ++ + +DLS V++L+ DEADKLF+ ++ D ++ +CS+PS+ ++
Sbjct: 253 DIIISTPLRLIDVVKNEALDLSTVKHLIFDEADKLFD-KTFVEQTDDILNSCSDPSLRKA 311
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSAT+P VEE+A++IM D +RVI+G K A+ +I+QKL+F G+EEGKL+A++Q +
Sbjct: 312 MFSATIPSNVEEIAQTIMMDPIRVIIGHKEAANANIEQKLIFCGNEEGKLIAIKQLVQQG 371
Query: 137 -LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
PPV+IF++S RAK LY EL +D++ VIH++ + Q
Sbjct: 372 EFRPPVIIFLESITRAKALYHELMYDNLNVDVIHAERTPIQ 412
>gi|254582647|ref|XP_002499055.1| ZYRO0E02530p [Zygosaccharomyces rouxii]
gi|238942629|emb|CAR30800.1| ZYRO0E02530p [Zygosaccharomyces rouxii]
Length = 556
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 120/172 (69%), Gaps = 2/172 (1%)
Query: 6 VRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVV 65
+R+ +S DI+ISTPLRL ++ + +DLS V +LV DEADKLF+ ++ D ++
Sbjct: 238 LRNKVVSDKKYDIIISTPLRLIDLVKNEALDLSNVRHLVFDEADKLFD-KTFVEQTDDIL 296
Query: 66 KACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK 125
ACS+P + +S+FSAT+P VEE+A+SIM D VRVI+G K A+ +I Q+LV+ G+EEGK
Sbjct: 297 SACSDPRLRKSMFSATIPSNVEEIAQSIMTDPVRVIIGHKEGANANIDQRLVYCGNEEGK 356
Query: 126 LLALRQSFAES-LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L+A+R+ E PPV+IF++S RAK LY EL +D + V+H++ +Q Q
Sbjct: 357 LIAIRRMVQEGEFKPPVIIFLESITRAKALYHELMYDGLNVDVLHAERTQMQ 408
>gi|325180080|emb|CCA14481.1| DEAD/DEAH box RNA helicase putative [Albugo laibachii Nc14]
Length = 594
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/160 (50%), Positives = 112/160 (70%), Gaps = 1/160 (0%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DILI+TPLRL I++ K+DLS VE + LDEAD+LFE+G + ID ++ +C+ P + R+
Sbjct: 288 DILIATPLRLVHLIQQAKVDLSGVEVITLDEADRLFELG-FIDQIDEIIASCTFPDVQRT 346
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSAT+ VEE A S++ D ++ VG KN+ ++SI QKL+F G EEGKL+A++Q
Sbjct: 347 MFSATMLQGVEEAAISVLRDPHKIAVGVKNSGAKSIDQKLMFVGKEEGKLVAMKQLGHIG 406
Query: 137 LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L P L+FVQ+K+R ELY EL +D I G IH+D SQ Q
Sbjct: 407 LQIPALLFVQNKERVDELYQELLYDGIHVGAIHADRSQMQ 446
>gi|340374721|ref|XP_003385886.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like
[Amphimedon queenslandica]
Length = 593
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 112/169 (66%), Gaps = 4/169 (2%)
Query: 12 SKFSCDILISTPLRL--RLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKA 67
S DIL++TP RL L++ I L VE+L+LDE DKLFE G ID + A
Sbjct: 286 SSLKFDILVTTPNRLVHMLSLDPPGIVLDNVEWLILDECDKLFEDGVTGFKDQIDEIFTA 345
Query: 68 CSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLL 127
CSNP+I R LFSATL VEE +R+ + VRVI+G +N+A+E+IKQ+L++ G E GKLL
Sbjct: 346 CSNPNIKRGLFSATLASGVEEFSRAHFDNFVRVIIGLQNSATETIKQQLLYVGQETGKLL 405
Query: 128 ALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
A+R + PPVL+FVQS +RAKEL+ EL +D + VIHS+ +Q Q
Sbjct: 406 AMRDIIHKGFTPPVLVFVQSIERAKELFHELIYDGMNVDVIHSERTQAQ 454
>gi|403215476|emb|CCK69975.1| hypothetical protein KNAG_0D02250 [Kazachstania naganishii CBS
8797]
Length = 560
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/161 (47%), Positives = 116/161 (72%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
D++ISTPLRL ++ + +DLSRV++L+ DEADKLF+ ++ D ++ +C++PS+ ++
Sbjct: 250 DVIISTPLRLIDVVKNEALDLSRVKHLIFDEADKLFD-KTFVEQTDDILSSCTDPSLRKA 308
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSAT+P VEE+A +IM D VRVI+G K A+ SI+QKLV+ G+EEGKL+A+RQ E
Sbjct: 309 MFSATIPSGVEEIAHTIMMDPVRVIIGHKEAANSSIEQKLVYCGNEEGKLIAIRQMVQEG 368
Query: 137 -LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
P++IF++S RAK LY EL +D + VIH++ + Q
Sbjct: 369 EFKAPIIIFLESITRAKALYHELMYDRMNVDVIHAERTPVQ 409
>gi|74654532|sp|Q9Y7C4.1|ROK1_CANAL RecName: Full=ATP-dependent RNA helicase CHR1
gi|4589366|gb|AAD26468.1| DEAD box RNA helicase [Candida albicans]
Length = 578
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/161 (47%), Positives = 113/161 (70%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DI++STPLRL +++ +DLS++E L++DEADKLF+ G + D ++ C+N I +S
Sbjct: 257 DIIVSTPLRLIDVVKQGNMDLSKIEQLIIDEADKLFDHG-FAEQTDEILTHCTNLKIRKS 315
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSAT+P VEE+A SIM D +R+I+G K AS +I QKLVF G+E+GKLLA+RQ +
Sbjct: 316 IFSATIPSSVEEMAHSIMKDPLRIIIGHKEAASNTIDQKLVFTGNEQGKLLAIRQMIQQG 375
Query: 137 -LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
PP++IF+QS RAK L+ EL +D + VIH++ + Q
Sbjct: 376 EFKPPIIIFLQSITRAKALFHELLYDRLNVDVIHAERTPKQ 416
>gi|422293301|gb|EKU20601.1| putative dead box rna helicase [Nannochloropsis gaditana CCMP526]
Length = 300
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 118/185 (63%), Gaps = 25/185 (13%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG----------------NLLKH 60
D+L++TP+RL A+R ++DL RV +VLDEADKLFE+G + L
Sbjct: 92 DLLVATPMRLLQALREGRVDLRRVRAVVLDEADKLFELGREGKKNAAGESLEPDKSFLGQ 151
Query: 61 IDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVG----RKN-----TASES 111
+D ++ AC+ P + R+LFSATLP +++LA S++ D V V VG R N ES
Sbjct: 152 VDEILAACTYPEVQRALFSATLPPLIQDLAGSVLRDPVSVSVGLPSNRSNYTHAAAVPES 211
Query: 112 IKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSD 171
+ Q+LVF G EEGKLLALRQ + + PP+L+F+++K+RA+ELY EL +D +R V+H+D
Sbjct: 212 VTQELVFVGREEGKLLALRQLLKQGVLPPILVFLENKERARELYHELCYDHLRVDVMHAD 271
Query: 172 LSQTQ 176
S Q
Sbjct: 272 RSTEQ 276
>gi|424513172|emb|CCO66756.1| PREDICTED: similar to Zinc finger protein 271 (Zinc finger protein
7) (HZF7) (Zinc finger protein ZNFphex133) (Epstein-Barr
virus-induced zinc finger protein) (ZNF-EB) (CT-ZFP48)
(Zinc finger protein [Bathycoccus prasinos]
Length = 991
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 90/189 (47%), Positives = 117/189 (61%), Gaps = 36/189 (19%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS---- 72
DILISTPLRL +R+KKI VE+LVLDEADKLFE+G ++ ID VV AC NP
Sbjct: 604 DILISTPLRLASLLRQKKISTHAVEFLVLDEADKLFEMG-FVEQIDAVVHACDNPDYTND 662
Query: 73 ------------------------IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTA 108
+++LFSATLP+ E LARS+MH VR+ VG +N+A
Sbjct: 663 DDDKKKKKKKKKKSPSSKTTKKKKCLKALFSATLPETAERLARSVMHHCVRLTVGERNSA 722
Query: 109 SESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKDR----AKELYGELAFDDIR 164
+ESI QKL+F G E GK+LA++Q + + P++IF QSKDR AKEL G A ++
Sbjct: 723 NESISQKLIFCGKESGKILAVKQMVQKGVQTPLIIFAQSKDRCIQVAKELTGG-ALGEV- 780
Query: 165 AGVIHSDLS 173
G+IHSD+S
Sbjct: 781 -GLIHSDMS 788
>gi|320583779|gb|EFW97992.1| ATP-dependent RNA helicase ROK1 [Ogataea parapolymorpha DL-1]
Length = 547
Score = 155 bits (392), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 85/166 (51%), Positives = 115/166 (69%), Gaps = 4/166 (2%)
Query: 12 SKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP 71
SKF DIL+STPLRL I + +DLS+VE +V DE DKLFE ++ D ++ ACSNP
Sbjct: 233 SKF--DILVSTPLRLIDLIGDEVMDLSKVEEVVFDEVDKLFE-SKFVEQTDRILTACSNP 289
Query: 72 SIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
+ RS+FSAT+ VEELA SIM+ +R+I+G K A+ +I+QKLVF G+E GKLLALR+
Sbjct: 290 KLRRSIFSATITSSVEELANSIMNSPIRIIIGHKEAANSNIEQKLVFCGNEHGKLLALRE 349
Query: 132 SFAES-LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ PPV+IF+QS RAK L+ EL +D + VIH++ +Q Q
Sbjct: 350 MLRKGEFKPPVIIFLQSITRAKALFHELLYDRLNVDVIHAERTQLQ 395
>gi|343426178|emb|CBQ69709.1| probable ROK1-ATP-dependent RNA helicase [Sporisorium reilianum
SRZ2]
Length = 614
Score = 155 bits (391), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 114/161 (70%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
D+LI+TPLRL A+ ++++DLS V +LVLDEAD+L E G L D ++ ACS+ + ++
Sbjct: 299 DVLITTPLRLVHAVEKEEVDLSNVRHLVLDEADRLLEEG-FLAQTDTILAACSHARLRKA 357
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
LFSATL VEE+AR+ M D RVIVG K+ A+E+I+Q+L F GSE+GKL ALR +
Sbjct: 358 LFSATLLAGVEEMARTFMVDECRVIVGTKDAATETIQQELQFVGSEDGKLHALRALMQQG 417
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L PPVL+FVQS +RAK L+ EL +D + VIHS+ + Q
Sbjct: 418 GLKPPVLLFVQSIERAKHLFHELVYDGLHVDVIHSERPKLQ 458
>gi|366990303|ref|XP_003674919.1| hypothetical protein NCAS_0B04630 [Naumovozyma castellii CBS 4309]
gi|342300783|emb|CCC68547.1| hypothetical protein NCAS_0B04630 [Naumovozyma castellii CBS 4309]
Length = 563
Score = 155 bits (391), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 76/161 (47%), Positives = 117/161 (72%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
D++I+TPLRL ++ + +DLS+V++L+ DEADKLF+ ++ D ++ +C++P + ++
Sbjct: 254 DLIITTPLRLIDLVKSEALDLSKVKHLIFDEADKLFD-KTFVEQADDILNSCTDPVLRKA 312
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSAT+P VEE+A SIM D VRVI+G K A+ +I+QKLVF G+EEGKL+A+RQ ES
Sbjct: 313 MFSATIPSNVEEIANSIMLDPVRVIIGHKEAANANIEQKLVFCGNEEGKLIAIRQLVQES 372
Query: 137 -LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
PP++IF++S RAK LY EL +D + VIH++ + Q
Sbjct: 373 EFKPPIIIFLESITRAKALYHELMYDRMNVDVIHAERTPMQ 413
>gi|365983372|ref|XP_003668519.1| hypothetical protein NDAI_0B02410 [Naumovozyma dairenensis CBS 421]
gi|343767286|emb|CCD23276.1| hypothetical protein NDAI_0B02410 [Naumovozyma dairenensis CBS 421]
Length = 571
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/161 (47%), Positives = 116/161 (72%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DI+ISTPLRL ++ + +DLS+V++L+ DEADKLF+ ++ D ++ +C++ S+ ++
Sbjct: 264 DIIISTPLRLIDVVKNEALDLSKVKHLIFDEADKLFD-KTFVEQTDDILSSCTDNSLRKA 322
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSAT+P VEE+A SIM D +RVI+G K A+ +I+QKLVF G+EEGKL+A+RQ E
Sbjct: 323 MFSATIPSNVEEIANSIMLDPIRVIIGHKEAANMNIEQKLVFCGNEEGKLIAIRQLVQEG 382
Query: 137 -LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
PP++IF++S RAK LY EL +D + VIH++ + Q
Sbjct: 383 EFKPPIIIFLESITRAKALYHELMYDRMNVDVIHAERTALQ 423
>gi|298708634|emb|CBJ26121.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 516
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/168 (45%), Positives = 111/168 (66%), Gaps = 8/168 (4%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGN--------LLKHIDPVVKAC 68
DI++STP+RL +R + + L+ VE +VLDEADKLF+ G + +D V+ AC
Sbjct: 199 DIVVSTPMRLVALVRERAVCLASVEMVVLDEADKLFDAGAASGGSDKAFIGQVDEVLAAC 258
Query: 69 SNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLA 128
S+ + R+LFSAT+ V+EL+ S++ D + + VG +N + I Q+LV+ G EEGKLLA
Sbjct: 259 SHQQVQRALFSATVGQQVKELSESVLRDPIFLTVGTQNAGAADIDQRLVYVGREEGKLLA 318
Query: 129 LRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+RQ E L PPVL+F+QSKDRAK L+ EL +D I V+H+ +Q Q
Sbjct: 319 IRQLVQEGLRPPVLVFLQSKDRAKALFHELVYDGINTDVMHASRTQDQ 366
>gi|50306033|ref|XP_452978.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74660546|sp|Q6CSW1.1|ROK1_KLULA RecName: Full=ATP-dependent RNA helicase ROK1
gi|49642111|emb|CAH01829.1| KLLA0C17424p [Kluyveromyces lactis]
Length = 579
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/167 (44%), Positives = 120/167 (71%), Gaps = 2/167 (1%)
Query: 11 LSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN 70
+S+ DI+ISTPLRL ++ + ++L +V++L+ DEADKLF+ ++ D ++ +C++
Sbjct: 256 ISEDKYDIIISTPLRLITVVQEEALNLGKVKHLIFDEADKLFD-KTFVEQTDDILSSCTD 314
Query: 71 PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
P + +++FSAT+P VEE+A++IM+D +RVI+G K A+ +I Q+LVF G+EEGKL+A+R
Sbjct: 315 PHLRKTMFSATIPSNVEEIAQTIMNDPIRVIIGHKEAANINIDQQLVFCGNEEGKLIAIR 374
Query: 131 QSFAES-LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
Q E PPV+IF++S RAK L+ EL +D + VIH++ +Q Q
Sbjct: 375 QLVLEGEFKPPVIIFLESITRAKALFHELLYDKLNVDVIHAERTQVQ 421
>gi|156373178|ref|XP_001629410.1| predicted protein [Nematostella vectensis]
gi|156216410|gb|EDO37347.1| predicted protein [Nematostella vectensis]
Length = 471
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 108/164 (65%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRL--RLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL L I+L VE+L+LDEADKLFE G + I + +AC+ P
Sbjct: 169 DILVTTPNRLVHLLTQEPPGIELHNVEWLILDEADKLFEEGKDGFREQIATIYQACNKPD 228
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
I R LFSATL + +EE A + + VRV VG +N+A+ ++ Q+L+F G E GKLLA+R
Sbjct: 229 IHRGLFSATLSNGIEEWAGLHLDNHVRVTVGIRNSATATVDQELLFVGQESGKLLAVRDI 288
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ PPVLIFVQSKDRAKEL+ EL +D I VIHSD +Q Q
Sbjct: 289 VQKGFTPPVLIFVQSKDRAKELFHELIYDGINVDVIHSDRTQAQ 332
>gi|301112328|ref|XP_002905243.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262095573|gb|EEY53625.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 709
Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 77/160 (48%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
D+LI+TPLRL I+ K+DLS VE + LDEAD+L E+G ++ +D + AC++P + R+
Sbjct: 374 DVLIATPLRLVHLIQESKVDLSTVEMVCLDEADRLLELG-FVEQVDEIFAACTHPKVQRA 432
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSAT+ + VEELA++++ D V+V VG KN + +I QKLVF G EEGKL+A++Q +
Sbjct: 433 MFSATMLEGVEELAQTVLRDPVKVAVGTKNAGASTIDQKLVFVGKEEGKLVAMKQLLQQG 492
Query: 137 LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L P L+FVQ+K+RA ELY EL +D + G +H+D ++ Q
Sbjct: 493 LQLPALLFVQNKERANELYHELLYDGVNIGAVHADRTKEQ 532
>gi|260946563|ref|XP_002617579.1| hypothetical protein CLUG_03023 [Clavispora lusitaniae ATCC 42720]
gi|238849433|gb|EEQ38897.1| hypothetical protein CLUG_03023 [Clavispora lusitaniae ATCC 42720]
Length = 561
Score = 151 bits (382), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 82/160 (51%), Positives = 110/160 (68%), Gaps = 2/160 (1%)
Query: 18 ILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 77
+++STPLRL ++ +DLS VE LV+DEAD++F+ G ++ D ++ A SN + S+
Sbjct: 257 VIVSTPLRLLDMVQGGHLDLSTVEQLVIDEADRMFDRG-FVEQTDALLAALSNAKLRTSI 315
Query: 78 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES- 136
FSAT+P VEELA SIM D VRVIVG K AS SI QKLVF GSE+GKLLA+RQ +
Sbjct: 316 FSATIPAKVEELANSIMRDPVRVIVGHKEAASSSIDQKLVFTGSEDGKLLAVRQMIQQGE 375
Query: 137 LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
PPV+IF+QS RAK L+ EL +D + VIH++ + Q
Sbjct: 376 FKPPVIIFLQSITRAKALFHELVYDRLNVDVIHAERTPAQ 415
>gi|194748100|ref|XP_001956487.1| GF25239 [Drosophila ananassae]
gi|190623769|gb|EDV39293.1| GF25239 [Drosophila ananassae]
Length = 535
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 113/164 (68%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRRKK--IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL+STP R+R ++++ +DLS+VE+ VLDEAD+L E G N + +D + ACSNP
Sbjct: 234 DILVSTPNRVRFLLQQQPPLLDLSQVEWFVLDEADRLMEEGQNNFKEQLDDIYAACSNPG 293
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ FSAT V + A + + VRV +G +NTA++S++Q+L+F GSE GKL+A+R
Sbjct: 294 KCVAFFSATYTVPVAKWALRHLKNLVRVTIGIQNTATDSVQQELLFVGSESGKLVAVRDL 353
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L PPVL+FVQSKDRAK+L+ EL +D I VIH++ SQ Q
Sbjct: 354 VRQGLQPPVLVFVQSKDRAKQLFEELLYDGINVDVIHAERSQHQ 397
>gi|385305034|gb|EIF49032.1| atp-dependent rna helicase rok1 [Dekkera bruxellensis AWRI1499]
Length = 574
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/166 (46%), Positives = 113/166 (68%), Gaps = 4/166 (2%)
Query: 12 SKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP 71
SKF +I+++TPLRL + IDLS + ++VLDEADK+FE N ++ D ++ AC+NP
Sbjct: 247 SKF--NIIVTTPLRLISLVEDDAIDLSHIHHIVLDEADKMFE-SNFVEQTDRILTACTNP 303
Query: 72 SIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
+ RS+FSAT+ VEE+A+S+M R+IVG K A+ +I+QKLVF G E GKL+A+R
Sbjct: 304 HLRRSIFSATITSSVEEIAQSVMTYPERIIVGHKEAANTNIEQKLVFCGDEHGKLIAIRN 363
Query: 132 SFAES-LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ PPV+IF+QS RAK L+ EL +D + VIH++ +Q Q
Sbjct: 364 MIQQGEFKPPVIIFLQSIPRAKALFHELIYDGLNVDVIHAERTQVQ 409
>gi|196015875|ref|XP_002117793.1| hypothetical protein TRIADDRAFT_33010 [Trichoplax adhaerens]
gi|190579678|gb|EDV19769.1| hypothetical protein TRIADDRAFT_33010 [Trichoplax adhaerens]
Length = 369
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/167 (47%), Positives = 107/167 (64%), Gaps = 7/167 (4%)
Query: 17 DILISTPLRLRLAIRRK-----KIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACS 69
DILI+TP RL + R IDLS VE L+ DEADK FE G + + + + C+
Sbjct: 151 DILIATPSRLIQCLSRNYSTVASIDLSSVELLIFDEADKFFESGRSSFREQVGIIYNYCN 210
Query: 70 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 129
NP + R+LFSATL VE RS + + + VIVGR+N A+E++ Q+L F G E+GKLLAL
Sbjct: 211 NPKVRRALFSATLSFEVENWCRSHLDNPLHVIVGRRNAAAETVSQELKFVGQEDGKLLAL 270
Query: 130 RQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
R + +PP L+FVQ K+RAK+L+ EL +D I VIHSD +Q Q
Sbjct: 271 RDIIRKDFDPPALVFVQDKERAKQLFQELIYDGINVEVIHSDRTQAQ 317
>gi|402224639|gb|EJU04701.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dacryopinax sp. DJM-731 SS1]
Length = 589
Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 76/160 (47%), Positives = 112/160 (70%), Gaps = 1/160 (0%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
D+LI+TPL L A+ ++L + +L+LDEAD+L E G LK I+ ++ ACS P I ++
Sbjct: 263 DLLITTPLSLVSALDEGILNLDNIRHLILDEADRLLEEG-FLKQIEAILAACSYPEIQKA 321
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSATLP VE +A + + +RVIVG K++A+++I Q+L+F GSE GKL ALR E
Sbjct: 322 VFSATLPAAVEAIANTFLRRPIRVIVGVKDSATDTIHQELLFCGSEIGKLQALRNLVVEG 381
Query: 137 LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ PPVLIFVQS +RA+EL+ EL +D + V+HS+ ++ Q
Sbjct: 382 IQPPVLIFVQSIERAQELFHELLYDGLNVDVVHSERTKAQ 421
>gi|255719940|ref|XP_002556250.1| KLTH0H08646p [Lachancea thermotolerans]
gi|238942216|emb|CAR30388.1| KLTH0H08646p [Lachancea thermotolerans CBS 6340]
Length = 566
Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 119/172 (69%), Gaps = 2/172 (1%)
Query: 6 VRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVV 65
+R+ +S D++ISTPLRL ++ + +DLS V++L+ DEADKLF+ ++ D ++
Sbjct: 245 LRNKVISDKKYDLIISTPLRLIDVVKNEALDLSDVKHLIFDEADKLFD-STFVEQADSIL 303
Query: 66 KACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK 125
+C + + +S+FSAT+P +EE+ SIM D VR+I+G K A+ +I+QKLV+ G+EEGK
Sbjct: 304 ASCQDSQLRKSMFSATVPSSLEEVVNSIMLDPVRIIIGHKEAANVNIEQKLVYCGNEEGK 363
Query: 126 LLALRQSFAE-SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L+A+RQ E PPV+IF++S RAK L+ EL +D++ VIH++ +Q Q
Sbjct: 364 LVAIRQMIQEGGFKPPVIIFLESITRAKALFHELLYDNLNVDVIHAERTQVQ 415
>gi|321466548|gb|EFX77543.1| hypothetical protein DAPPUDRAFT_321368 [Daphnia pulex]
Length = 581
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/164 (46%), Positives = 109/164 (66%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRRKK--IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DILI+TP RL + ++ I L VE+L++DE+DKLFE G + + +AC +
Sbjct: 258 DILITTPNRLVFLLSQEPPAISLKNVEWLIVDESDKLFEEGRQGFRDQLGAIYRACDSNQ 317
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
I R+ FSAT V+E + + + V + +G+KN+ASE ++Q+L+FAGSE GKL+A R
Sbjct: 318 IRRAFFSATFAFDVQEWCKLNLDNVVMLTIGQKNSASEKVEQQLIFAGSEGGKLMAFRNL 377
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E LNPPVL+FVQ+K+RAKELY EL +D I VIH++ SQ Q
Sbjct: 378 IVEGLNPPVLVFVQTKERAKELYTELVYDGINVDVIHAERSQLQ 421
>gi|344302192|gb|EGW32497.1| ATP-dependent RNA helicase ROK1 [Spathaspora passalidarum NRRL
Y-27907]
Length = 546
Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 77/161 (47%), Positives = 111/161 (68%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DI+++TPLRL + + IDLS+V L++DEADKLF+ G + D ++ C+ P I +S
Sbjct: 241 DIIVTTPLRLIDIVHNQAIDLSKVSNLIIDEADKLFDHG-FAEQTDEILTHCTFPHIQKS 299
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
+FSAT+P VEE+A SIM D +RVI+G K A+ +I QKLVF G+E+GKLLA+RQ +
Sbjct: 300 MFSATIPSGVEEMAHSIMKDPIRVIIGHKEAANVTIDQKLVFTGNEQGKLLAIRQMIQQG 359
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
PP++IF+QS RAK L+ EL +D + VIH++ + Q
Sbjct: 360 QFKPPIIIFLQSITRAKALFHELLYDRLNVDVIHAERTPKQ 400
>gi|383792218|gb|AFH41849.1| FI20004p1 [Drosophila melanogaster]
Length = 609
Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 113/164 (68%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRRKK--IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL+STP R+R ++++ +DLS VE+ VLDEAD+L E G N + +D + ACSNP+
Sbjct: 256 DILVSTPNRVRFLLQQEPPLLDLSHVEWFVLDEADRLMEEGQNNFKEQLDDIYAACSNPT 315
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ FSAT V + A + + VR+ +G +N+A+E+++Q+L+F GSE GKL+A+R
Sbjct: 316 KCVAFFSATYTVPVAKWALRHLKNLVRITIGVQNSATETVQQELLFVGSEGGKLVAIRDL 375
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L PPVL+FVQSK+RAK+L+ EL +D I VIH++ SQ Q
Sbjct: 376 VRQGLQPPVLVFVQSKERAKQLFEELLYDGINVDVIHAERSQHQ 419
>gi|209418026|gb|ACI46551.1| RE58551p [Drosophila melanogaster]
Length = 609
Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 113/164 (68%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRRKK--IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL+STP R+R ++++ +DLS VE+ VLDEAD+L E G N + +D + ACSNP+
Sbjct: 256 DILVSTPNRVRFLLQQEPPLLDLSHVEWFVLDEADRLMEEGQNNFKEQLDDIYAACSNPT 315
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ FSAT V + A + + VR+ +G +N+A+E+++Q+L+F GSE GKL+A+R
Sbjct: 316 KCVAFFSATYTVPVAKWALRHLKNLVRITIGVQNSATETVQQELLFVGSEGGKLVAIRDL 375
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L PPVL+FVQSK+RAK+L+ EL +D I VIH++ SQ Q
Sbjct: 376 VRQGLQPPVLVFVQSKERAKQLFEELLYDGINVDVIHAERSQHQ 419
>gi|24666101|ref|NP_649009.1| CG5589 [Drosophila melanogaster]
gi|7293941|gb|AAF49303.1| CG5589 [Drosophila melanogaster]
Length = 594
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 113/164 (68%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRRKK--IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL+STP R+R ++++ +DLS VE+ VLDEAD+L E G N + +D + ACSNP+
Sbjct: 241 DILVSTPNRVRFLLQQEPPLLDLSHVEWFVLDEADRLMEEGQNNFKEQLDDIYAACSNPT 300
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ FSAT V + A + + VR+ +G +N+A+E+++Q+L+F GSE GKL+A+R
Sbjct: 301 KCVAFFSATYTVPVAKWALRHLKNLVRITIGVQNSATETVQQELLFVGSEGGKLVAIRDL 360
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L PPVL+FVQSK+RAK+L+ EL +D I VIH++ SQ Q
Sbjct: 361 VRQGLQPPVLVFVQSKERAKQLFEELLYDGINVDVIHAERSQHQ 404
>gi|19113945|ref|NP_593033.1| ATP-dependent RNA helicase Rok1 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|1175447|sp|Q09775.1|ROK1_SCHPO RecName: Full=ATP-dependent RNA helicase rok1
gi|1008436|emb|CAA91073.1| ATP-dependent RNA helicase Rok1 (predicted) [Schizosaccharomyces
pombe]
Length = 481
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/161 (47%), Positives = 111/161 (68%), Gaps = 3/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
D+ I TP+RL AI+ + +VE+ V+DEAD+LFE G ++ D ++ AC++ +I +S
Sbjct: 168 DMCIGTPMRLVQAIQ-TGLSFEKVEFFVMDEADRLFEPG-FIEQTDHILSACTSSNICKS 225
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
LFSAT+P VEELA+ + D +R+IVG K+ A++SI Q+L+F GS+ K++ LRQ +
Sbjct: 226 LFSATIPSRVEELAKVVTVDPIRIIVGLKDAATDSIDQRLLFVGSDTSKIVILRQMISNG 285
Query: 137 -LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L P V+IFVQ +RAK LY EL FD+I GVIH +L Q +
Sbjct: 286 ELKPRVVIFVQDIERAKALYTELLFDEIHVGVIHGELPQAK 326
>gi|344233769|gb|EGV65639.1| hypothetical protein CANTEDRAFT_129123 [Candida tenuis ATCC 10573]
Length = 556
Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/161 (46%), Positives = 114/161 (70%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DIL++TPLRL I+ + I+LS+V+ LV+DEADKLFE G L+ D ++ + ++ ++ ++
Sbjct: 244 DILVATPLRLIGLIKSESINLSKVQNLVVDEADKLFEQG-FLQQTDTILASLNSKNVQKT 302
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSAT+P VEE+ ++IM D +RVI+G K AS +I QKL+F G+EEGKLLA+RQ +
Sbjct: 303 MFSATIPSGVEEICQAIMIDPLRVIIGHKEAASNTIDQKLIFTGNEEGKLLAIRQLIQDG 362
Query: 137 -LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
P ++IF+QS RAK L+ EL +D + VIH++ + Q
Sbjct: 363 EFKPSIIIFLQSIIRAKSLFHELLYDKLNVDVIHAERTPKQ 403
>gi|302843242|ref|XP_002953163.1| hypothetical protein VOLCADRAFT_118300 [Volvox carteri f.
nagariensis]
gi|300261550|gb|EFJ45762.1| hypothetical protein VOLCADRAFT_118300 [Volvox carteri f.
nagariensis]
Length = 602
Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 114/175 (65%), Gaps = 4/175 (2%)
Query: 1 MKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKH 60
+ K +D SK D+L++ PLRL + K+ L++ Y+VLDEADKLFE+G +
Sbjct: 342 LTKSTAAGSDFSK--VDVLLANPLRLVKMVEEGKVQLAQCRYVVLDEADKLFELG-FMDQ 398
Query: 61 IDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAG 120
ID ++ A + +VR+LFSATLP+ VE+LARS++ +R+ VG +N A +++Q+L F G
Sbjct: 399 IDALLAAAQHRDVVRALFSATLPERVEDLARSVLQQPLRITVGLRNAAVSNVRQRLHFVG 458
Query: 121 SEEGKLLALRQSFAE-SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
E GKLLALRQ A+ L PPVL+FV SK+RAK L+ EL +D + I + Q
Sbjct: 459 REAGKLLALRQLLADGGLVPPVLVFVGSKERAKALHRELMYDGVHVDSITAGQPQ 513
>gi|50547433|ref|XP_501186.1| YALI0B21538p [Yarrowia lipolytica]
gi|74660084|sp|Q6CDS6.1|ROK1_YARLI RecName: Full=ATP-dependent RNA helicase ROK1
gi|49647052|emb|CAG83439.1| YALI0B21538p [Yarrowia lipolytica CLIB122]
Length = 547
Score = 145 bits (367), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 80/170 (47%), Positives = 115/170 (67%), Gaps = 4/170 (2%)
Query: 6 VRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVV 65
+R+ +S DI I+TPLRL A+ +DL ++ ++ DEADKLFE G +D ++
Sbjct: 232 LRNGKVSSQKYDICITTPLRLVSALNDGSLDLGSLDLVIFDEADKLFEKG-FATQVDDIL 290
Query: 66 KACSNPSIVRSLFSATLPDFVEELARSIMH-DAVRVIVGRKNTASESIKQKLVFAGSEEG 124
AC + I ++LFSAT+P VE+LA SIM D +R+I+G K A+++++QKLV+AG+EEG
Sbjct: 291 AACPS-GIQKTLFSATIPASVEQLANSIMSTDPLRIIIGNKQAAAQTVEQKLVYAGNEEG 349
Query: 125 KLLALRQSFAES-LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLS 173
KL+A+RQ E L PV+IF+QS DRAK L+ EL FD I IH D++
Sbjct: 350 KLVAIRQMAREGQLVAPVIIFLQSIDRAKALFKELVFDGINVDQIHGDMT 399
>gi|384247417|gb|EIE20904.1| P-loop containing nucleoside triphosphate hydrolase protein,
partial [Coccomyxa subellipsoidea C-169]
Length = 378
Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 80/168 (47%), Positives = 109/168 (64%), Gaps = 8/168 (4%)
Query: 8 STDLSK---FSCDILISTPLRL-RLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDP 63
TD +K DI+++TPLRL +LA KK D S VE+LV DEADKL + G + +D
Sbjct: 136 GTDFTKVLLLQMDIVVATPLRLSKLA---KKADFSSVEFLVFDEADKLLDQG-FVTQMDK 191
Query: 64 VVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEE 123
VV AC+NP V + FSATLP+ VEELARS++ VRV VG +N+A+ S++Q+LVF G+E
Sbjct: 192 VVAACTNPRRVAAFFSATLPEKVEELARSLLKQPVRVTVGERNSAAASVQQRLVFVGNEA 251
Query: 124 GKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSD 171
GKL+ALR PP+L+F SK R L+ +LA + + I +D
Sbjct: 252 GKLIALRDLLGLGTRPPILVFTNSKQRCSALHRDLALEGVLVDSISAD 299
>gi|195591171|ref|XP_002085316.1| GD12376 [Drosophila simulans]
gi|194197325|gb|EDX10901.1| GD12376 [Drosophila simulans]
Length = 592
Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 113/164 (68%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRRKK--IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL+STP R+R ++++ +DLS VE+ VLDEAD+L E G N + +D + ACS+P+
Sbjct: 241 DILVSTPNRVRFLLQQEPPLLDLSHVEWFVLDEADRLMEEGQNNFKEQLDDIYAACSHPT 300
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ FSAT V + A + + VR+ +G +N+A+E+++Q+L+F GSE GKL+A+R
Sbjct: 301 KCVAFFSATYTVPVAKWALRHLKNLVRITIGVQNSATETVQQELLFVGSEGGKLVAMRDL 360
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L PPVL+FVQSK+RAK+L+ EL +D I VIH++ SQ Q
Sbjct: 361 VRQGLQPPVLVFVQSKERAKQLFEELLYDGINVDVIHAERSQHQ 404
>gi|195128419|ref|XP_002008661.1| GI13618 [Drosophila mojavensis]
gi|193920270|gb|EDW19137.1| GI13618 [Drosophila mojavensis]
Length = 595
Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 112/164 (68%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRRKK--IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DILISTP R+R ++++ +D +E+LVLDEAD+L E G N + +D + AC+NP
Sbjct: 248 DILISTPNRVRFLLQQQPPLLDFKSIEWLVLDEADRLMEEGQNNFKEQLDDIYAACTNPQ 307
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ FSAT V + A + + VRV +G +N+A++++KQ+L+F GSE GKLLA+R+
Sbjct: 308 KRVAFFSATYTVPVAKWALRHLKNLVRVTIGVQNSATDTVKQELLFVGSESGKLLAVREM 367
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L PPVL+FVQSK+RAK+L+ EL +D I VIH++ +Q Q
Sbjct: 368 VRQGLQPPVLVFVQSKERAKQLFEELLYDGINVDVIHAERTQHQ 411
>gi|195494738|ref|XP_002094967.1| GE22119 [Drosophila yakuba]
gi|194181068|gb|EDW94679.1| GE22119 [Drosophila yakuba]
Length = 594
Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 113/164 (68%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRRKK--IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL+STP R+R ++++ +DLS VE+ VLDEAD+L E G N + +D + ACS+P+
Sbjct: 242 DILVSTPNRVRFLLQQEPPLLDLSHVEWFVLDEADRLMEEGQNNFKEQLDDIYAACSHPT 301
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ FSAT V + A + + VR+ +G +N+A+E+++Q+L+F GSE GKL+A+R
Sbjct: 302 KCVAFFSATYTVPVAKWALRHLKNLVRITIGVQNSATETVQQELLFVGSEGGKLVAMRDL 361
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L PPVL+FVQSK+RAK+L+ EL +D I VIH++ SQ Q
Sbjct: 362 VRQGLQPPVLVFVQSKERAKQLFEELLYDGINVDVIHAERSQHQ 405
>gi|194871760|ref|XP_001972900.1| GG15782 [Drosophila erecta]
gi|190654683|gb|EDV51926.1| GG15782 [Drosophila erecta]
Length = 592
Score = 145 bits (366), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 113/164 (68%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRRKK--IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL+STP R+R ++++ +DLS VE+ VLDEAD+L E G N + +D + ACS+P+
Sbjct: 240 DILVSTPNRVRFLLQQEPPLLDLSHVEWFVLDEADRLMEEGQNNFKEQLDDIYAACSHPT 299
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ FSAT V + A + + VR+ +G +N+A+E+++Q+L+F GSE GKL+A+R
Sbjct: 300 KCVAFFSATYTVPVAKWALRHLKNLVRITIGVQNSATETVQQELLFVGSEGGKLVAMRDL 359
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L PPVL+FVQSK+RAK+L+ EL +D I VIH++ SQ Q
Sbjct: 360 VRQGLQPPVLVFVQSKERAKQLFEELLYDGINVDVIHAERSQHQ 403
>gi|85683111|gb|ABC73531.1| CG5589 [Drosophila miranda]
Length = 356
Score = 145 bits (365), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 111/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRRKK--IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DILISTP R+R ++++ +DL VE+ VLDEAD+L E G N + +D + ACS+P
Sbjct: 140 DILISTPNRVRFLLQQQPPLLDLKGVEWFVLDEADRLMEEGQNNFKEQLDDIYAACSHPQ 199
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ FSAT V + A + + VR+ +G +N+A+++++Q+L+F GSE GKL+A+R
Sbjct: 200 KCVAFFSATYTVPVAKWALRHLKNLVRITIGVQNSATDTVQQELLFVGSESGKLVAMRNL 259
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L PPVL+FVQSKDRAK+L+ EL +D I VIH++ SQ Q
Sbjct: 260 VRQGLQPPVLVFVQSKDRAKQLFEELLYDGINVDVIHAERSQHQ 303
>gi|198466271|ref|XP_002135148.1| GA23405 [Drosophila pseudoobscura pseudoobscura]
gi|198150524|gb|EDY73775.1| GA23405 [Drosophila pseudoobscura pseudoobscura]
Length = 597
Score = 145 bits (365), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 111/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRRKK--IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DILISTP R+R ++++ +DL VE+ VLDEAD+L E G N + +D + ACS+P
Sbjct: 245 DILISTPNRVRFLLQQQPPLLDLKGVEWFVLDEADRLMEEGQNNFKEQLDDIYAACSHPQ 304
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ FSAT V + A + + VR+ +G +N+A+++++Q+L+F GSE GKL+A+R
Sbjct: 305 KCVAFFSATYTVPVAKWALRHLKNLVRITIGVQNSATDTVQQELLFVGSESGKLVAMRNL 364
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L PPVL+FVQSKDRAK+L+ EL +D I VIH++ SQ Q
Sbjct: 365 VRQGLQPPVLVFVQSKDRAKQLFEELLYDGINVDVIHAERSQHQ 408
>gi|195166521|ref|XP_002024083.1| GL22752 [Drosophila persimilis]
gi|194107438|gb|EDW29481.1| GL22752 [Drosophila persimilis]
Length = 597
Score = 145 bits (365), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 111/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRRKK--IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DILISTP R+R ++++ +DL VE+ VLDEAD+L E G N + +D + ACS+P
Sbjct: 245 DILISTPNRVRFLLQQQPPLLDLKGVEWFVLDEADRLMEEGQNNFKEQLDDIYAACSHPQ 304
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ FSAT V + A + + VR+ +G +N+A+++++Q+L+F GSE GKL+A+R
Sbjct: 305 KCVAFFSATYTVPVAKWALRHLKNLVRITIGVQNSATDTVQQELLFVGSESGKLVAMRNL 364
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L PPVL+FVQSKDRAK+L+ EL +D I VIH++ SQ Q
Sbjct: 365 VRQGLQPPVLVFVQSKDRAKQLFEELLYDGINVDVIHAERSQHQ 408
>gi|312380576|gb|EFR26532.1| hypothetical protein AND_07336 [Anopheles darlingi]
Length = 608
Score = 145 bits (365), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 76/162 (46%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 17 DILISTPLRL--RLAIRRKKIDLSRVEYLVLDEADKLFE--VGNLLKHIDPVVKACSNPS 72
DIL++TP R+ LA + +IDLS ++++V+DEADKLFE + + +D V+ AC NP+
Sbjct: 264 DILVTTPNRICYLLAQKPPQIDLSNIQWVVVDEADKLFEDSKNSFREQLDTVLNACVNPT 323
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
V +LFSAT ++ S + +R +G+ N+A +S++QKL+F G+E GKLLA R+
Sbjct: 324 KVVALFSATQTREADQWVASNVPRRIRFSIGQANSAVDSVEQKLLFTGNESGKLLAFREL 383
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
A+ L+PPVL+FVQSKDRA++L+ EL +D + VIHSD SQ
Sbjct: 384 VAQGLSPPVLVFVQSKDRAQQLFTELIYDGLNVDVIHSDRSQ 425
>gi|195328469|ref|XP_002030937.1| GM24308 [Drosophila sechellia]
gi|194119880|gb|EDW41923.1| GM24308 [Drosophila sechellia]
Length = 592
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 112/164 (68%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRRKK--IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL+STP R+R ++++ +DLS VE+ VLDEAD+L E G N + +D + ACS+P+
Sbjct: 241 DILVSTPNRVRFLLQQEPPLLDLSHVEWFVLDEADRLMEEGQNNFKEQLDDIYAACSHPT 300
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
S FSAT V + A + + VR+ +G +N+A+E+++Q+L+F GSE GKL+A+R
Sbjct: 301 KCVSFFSATYTVPVAKWALRHLKNLVRITIGVQNSATETVQQELLFVGSEGGKLVAMRDL 360
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L PPVL+FVQSK+RAK+L+ EL +D I VIH++ S Q
Sbjct: 361 VRQGLQPPVLVFVQSKERAKQLFEELLYDGINVDVIHAEKSHHQ 404
>gi|307167458|gb|EFN61031.1| Probable ATP-dependent RNA helicase DDX52 [Camponotus floridanus]
Length = 498
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 107/164 (65%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRRK--KIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DILI+TP RL + + I L+ VE+L++DEADKLFE G + +D + +AC+N +
Sbjct: 193 DILITTPKRLVFLLNQDPPAISLNNVEWLIVDEADKLFEEGIRGFREQLDEITRACTNTN 252
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R +FSAT V + R M + V VG +N A++ + Q+++F GSE GKLLA R
Sbjct: 253 LHRGMFSATNTPAVSKWCRRNMKGLITVTVGHRNAATDMVDQEILFVGSERGKLLAFRNM 312
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ ++PPVL+FVQSK+RA+EL+ EL +D I VIH+D + TQ
Sbjct: 313 IQKGISPPVLVFVQSKERAQELFNELIYDGINVDVIHADRTTTQ 356
>gi|390366612|ref|XP_003731077.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like
[Strongylocentrotus purpuratus]
Length = 403
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 110/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRRK--KIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ I L+ VE+L++DE+DKLFE G + + +AC +
Sbjct: 33 DILVTTPNRLVYLLQQDPPAIKLNHVEWLIIDESDKLFEEGKTGFRDQLGIIYQACDSSQ 92
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ R + + V V +G +NTA++ I+Q+L+F GSE GKLLA+R
Sbjct: 93 VRRAMFSATFAYDVEQWCRLNLDNVVTVSIGARNTANDRIEQELIFVGSESGKLLAVRNL 152
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
F++ PPVL+FVQSK+RAKEL+ EL +D VIH+D +QTQ
Sbjct: 153 FSKGFTPPVLVFVQSKERAKELFQELIYDGYNVDVIHADKTQTQ 196
>gi|405975314|gb|EKC39888.1| Putative ATP-dependent RNA helicase DDX52 [Crassostrea gigas]
Length = 563
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 113/164 (68%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRRKK--IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
D+L+STP RL ++ I+LS+VE+LV+DE+DKLFE G + V +AC++ +
Sbjct: 250 DVLVSTPNRLVYMLQEDPPLINLSQVEWLVIDESDKLFEDGKTGFRDQLAKVYQACNSNN 309
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VEE + + + ++V +G KN+A+ +I+Q+L F G+E GKLLA+R
Sbjct: 310 VKRAMFSATFAVEVEEWCKLNLDNVLQVYIGAKNSATTTIEQELKFVGTESGKLLAVRDI 369
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
A+ + PPVLIFVQSK+RA+EL+ EL +D + VIHSD +Q Q
Sbjct: 370 IAKGVQPPVLIFVQSKERARELFHELIYDGMNVDVIHSDQTQEQ 413
>gi|291001203|ref|XP_002683168.1| predicted protein [Naegleria gruberi]
gi|284096797|gb|EFC50424.1| predicted protein [Naegleria gruberi]
Length = 358
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/149 (50%), Positives = 107/149 (71%), Gaps = 6/149 (4%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DILISTP+RL I+ IDL+ VE LV DEAD+LF++G ++ +D ++ C+NP++V++
Sbjct: 94 DILISTPMRLLSMIKSGIIDLTNVEMLVFDEADRLFDLG-FIEQVDEILGFCTNPNLVKT 152
Query: 77 LFSATLPDFVEELARS----IMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
FSAT+P +E ++ + D+V+V +G +N ++I+QKL+F GSEEGKLLAL++
Sbjct: 153 YFSATIPLSLEHTLKTQTSLLKIDSVQVSIGVRNAGPDTIEQKLIFVGSEEGKLLALKER 212
Query: 133 F-AESLNPPVLIFVQSKDRAKELYGELAF 160
E L PPVLIFVQS DRAK+LY EL F
Sbjct: 213 IRIEGLKPPVLIFVQSIDRAKQLYKELLF 241
>gi|443693266|gb|ELT94682.1| hypothetical protein CAPTEDRAFT_187719 [Capitella teleta]
Length = 604
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 114/179 (63%), Gaps = 10/179 (5%)
Query: 8 STDLSKFS------CDILISTPLRLRLAIRRKK--IDLSRVEYLVLDEADKLFEVG--NL 57
ST + KF DIL++TP RL ++++ IDL +E+L++DE+DKLFE G
Sbjct: 252 STAIDKFGPKSSQRFDILVTTPNRLIFMLKQEPPAIDLKNIEWLIVDESDKLFEDGKTGF 311
Query: 58 LKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLV 117
+ + + KAC + ++ R+ FSAT VEE + + + V+V +G +N+A+ +I+QKL
Sbjct: 312 REQLAEIFKACDSTNVRRAFFSATFTYDVEEWCKLNLDNVVQVYIGARNSATHTIEQKLE 371
Query: 118 FAGSEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
F G+E GKLLA+R + PPVL+FVQSKDRAKEL+ EL +D I VIH+ +Q Q
Sbjct: 372 FVGTETGKLLAIRDLIRKGFQPPVLVFVQSKDRAKELFKELLYDGINVDVIHAGRTQAQ 430
>gi|195440590|ref|XP_002068123.1| GK12420 [Drosophila willistoni]
gi|194164208|gb|EDW79109.1| GK12420 [Drosophila willistoni]
Length = 541
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 112/164 (68%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRRKK--IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DILISTP R+R ++++ +DLS VE+ VLDEAD+L E G N + +D + ACS+
Sbjct: 243 DILISTPNRVRFLLQQEPPLLDLSAVEWFVLDEADRLMEEGKNNFKEQLDDIYSACSHSG 302
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ FSAT V + A + + VR+ +G +N+A+++++Q+L+F GSE GKL+A+R
Sbjct: 303 KRVAFFSATYTVPVAKWALRHLKNLVRITIGVQNSATDTVQQELLFVGSESGKLVAIRNL 362
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E L+PPVLIFVQSKDRAK+L+ EL +D I VIH++ +Q Q
Sbjct: 363 VKEGLHPPVLIFVQSKDRAKQLFEELLYDGINVDVIHAERTQHQ 406
>gi|403369815|gb|EJY84760.1| hypothetical protein OXYTRI_17392 [Oxytricha trifallax]
Length = 634
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 110/158 (69%), Gaps = 4/158 (2%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP-SI 73
SC+ILISTPL+L ++ K L+ +E+LV+DEADK+FE+G L+ +D +++ + I
Sbjct: 266 SCEILISTPLKLAELCQQYK--LNNLEFLVVDEADKMFELG-FLEQVDQILEQQNEQYKI 322
Query: 74 VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 133
+ LFSAT+ +EEL R+IM D +++ +G KN +++ I Q++ + G E+GKL LR+
Sbjct: 323 CKFLFSATMQPGIEELVRTIMEDPIKIQMGIKNASNQLIDQQIQYVGDEQGKLHTLRELL 382
Query: 134 AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSD 171
A+ PP+LIFVQSK RAKELY EL +D + VIH+D
Sbjct: 383 ADGFEPPMLIFVQSKHRAKELYHELIYDGLNVNVIHAD 420
>gi|198426131|ref|XP_002127349.1| PREDICTED: similar to Ddx52 protein [Ciona intestinalis]
Length = 538
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 115/185 (62%), Gaps = 9/185 (4%)
Query: 1 MKKELVRS-TDLSKFSCDI--LISTPLRLRLAIRRKK--IDLSRVEYLVLDEADKLFEVG 55
M K LV+S T+ K +CDI LISTP R+ I+++ + L +E+LV+DE+DKLFE G
Sbjct: 210 MDKNLVKSFTEKKKQTCDIDLLISTPNRIIHLIKQETPILKLDSIEWLVVDESDKLFEDG 269
Query: 56 ----NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASES 111
+ + + AC NP I R++FSAT V++ M + ++V VG KNTA+ S
Sbjct: 270 KEDASFRDQLGRIYSACENPKIRRAMFSATFAHDVQQWCVLNMDNVLQVTVGGKNTATSS 329
Query: 112 IKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSD 171
+KQ+L + G+E+GKLLA++ PP L+FVQSK+RAKELY EL +D I IH D
Sbjct: 330 VKQELKYVGNEQGKLLAMQDIIRGGFAPPALVFVQSKERAKELYAELVYDGINIDAIHGD 389
Query: 172 LSQTQ 176
+ Q
Sbjct: 390 RTPEQ 394
>gi|440804141|gb|ELR25019.1| DEAD/DEAH box helicase [Acanthamoeba castellanii str. Neff]
Length = 643
Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 71/160 (44%), Positives = 110/160 (68%), Gaps = 12/160 (7%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DIL++TP+RL +R + + L V++LVLDEADKL ++G ++ +D ++ AC+N ++ RS
Sbjct: 338 DILVTTPMRLVHLLRTESLKLDSVQHLVLDEADKLLDMG-FMEQVDEIIAACTNQAVQRS 396
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
L+SAT+ VE+LAR+ + D V + +G ++ A+ +IKQ+L F G EEGKLL LRQ
Sbjct: 397 LWSATMSPIVEDLARTFLRDPVHLTIGTRDAATTTIKQRLEFVGREEGKLLMLRQ----- 451
Query: 137 LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ QSKDRAKEL+ EL +++++ VIHS+ +Q Q
Sbjct: 452 ------MITQSKDRAKELFRELIYENLKVDVIHSERTQAQ 485
>gi|348686378|gb|EGZ26193.1| hypothetical protein PHYSODRAFT_555670 [Phytophthora sojae]
Length = 698
Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 66/142 (46%), Positives = 101/142 (71%), Gaps = 1/142 (0%)
Query: 35 IDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIM 94
+DLS VE + LDEAD+L E+G ++ +D + AC++ + R++FSAT+ + VEELA++++
Sbjct: 378 VDLSTVEMVCLDEADRLLELG-FVEQVDEIFAACTHAKVQRAMFSATMLEGVEELAQTVL 436
Query: 95 HDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKDRAKEL 154
D V+V VG KN + +I QKLVF G EEGKL+A++Q + L P L+FVQ+K+RA EL
Sbjct: 437 RDPVKVAVGTKNAGASTIDQKLVFVGKEEGKLVAMKQLLHDGLQLPALLFVQNKERANEL 496
Query: 155 YGELAFDDIRAGVIHSDLSQTQ 176
Y EL +D + G +H+D ++ Q
Sbjct: 497 YHELLYDGVNIGAVHADRTKEQ 518
>gi|189235329|ref|XP_975300.2| PREDICTED: similar to DEAD box ATP-dependent RNA helicase
[Tribolium castaneum]
Length = 553
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 115/180 (63%), Gaps = 4/180 (2%)
Query: 1 MKKELVRSTDLSKFSCDILISTPLRLRLAIRRKK--IDLSRVEYLVLDEADKLFEVGN-- 56
+ K L++ S DILI+TP R+ +++ + + L+ +++LV+DEADKLFE GN
Sbjct: 221 INKALIQYGPNSSQKFDILITTPNRVCFLLKQDQAALSLANIKWLVIDEADKLFETGNRG 280
Query: 57 LLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKL 116
+ +D ++ AC+N ++FSAT V + M VR+ VG++N A++++ Q+L
Sbjct: 281 FREQLDQILNACTNKEKKVAMFSATYTPMVAKWCVHNMKGLVRITVGQRNAAADTVDQEL 340
Query: 117 VFAGSEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+F G+E+GKLLA R + L PPVL+FVQSKDRA++L+ EL +D I IH+D +Q Q
Sbjct: 341 LFVGNEQGKLLAFRDLVKKGLTPPVLVFVQSKDRAQQLFNELIYDGINVDAIHADRTQLQ 400
>gi|195379282|ref|XP_002048409.1| GJ13954 [Drosophila virilis]
gi|194155567|gb|EDW70751.1| GJ13954 [Drosophila virilis]
Length = 605
Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 111/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRRKK--IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DILISTP R+R ++++ +D +E+ VLDEAD+L E G N + +D + AC++P
Sbjct: 247 DILISTPNRVRFLLQQQPPLLDFKGIEWFVLDEADRLMEEGQNNFKEQLDEIYAACTHPQ 306
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ FSAT V + A + + VRV +G +N+A+++++Q+L+F GSE GKLLA+R+
Sbjct: 307 KRVAFFSATYTVPVAKWALRHLKNLVRVTIGVQNSATDTVQQELLFVGSESGKLLAVREM 366
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L PPVL+FVQSKDRAK+L+ EL +D I VIH++ +Q Q
Sbjct: 367 VRQGLQPPVLVFVQSKDRAKQLFEELLYDGINVDVIHAERTQHQ 410
>gi|327291685|ref|XP_003230551.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like [Anolis
carolinensis]
Length = 487
Score = 142 bits (357), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 77/164 (46%), Positives = 108/164 (65%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
D+L++TP RL +++ IDLSRVE+LV+DE+DKLFE G + + ACS+P
Sbjct: 193 DVLVTTPNRLIYLLKQDPPAIDLSRVEWLVVDESDKLFEEGKTGFRDQLATLFSACSSPL 252
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
R+LFSAT VE+ R + V V +G +N A+E++ Q+L+F GSE GKLLA+R
Sbjct: 253 AKRALFSATFAHDVEQWCRLNLDSVVSVSIGARNAAAETVDQELLFVGSETGKLLAMRDF 312
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ PPVL+FVQS +RAKEL+ EL ++ I A VIH+D +Q Q
Sbjct: 313 VKKGFAPPVLVFVQSIERAKELFRELIYEGINADVIHADRTQQQ 356
>gi|307198933|gb|EFN79685.1| Probable ATP-dependent RNA helicase DDX52 [Harpegnathos saltator]
Length = 452
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 107/164 (65%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DILI+TP RL + + I L VE+L++DEADKLFE G + +D + KAC+N +
Sbjct: 148 DILITTPKRLVFLLNQDPPAISLKNVEWLIVDEADKLFEDGIRGFRQQLDEITKACTNDN 207
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ +FSAT V + R M V V VG++N A++ ++Q+LVF GSE+GKL+ LR
Sbjct: 208 LHCGMFSATNTPVVTKWCRRNMKRLVTVTVGQRNAATDLVEQELVFVGSEKGKLMELRNM 267
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + PPVLIFVQSK+RA+EL+ EL +D + VIH+D + TQ
Sbjct: 268 IRKGVAPPVLIFVQSKERAQELFNELIYDGVYVDVIHADRTVTQ 311
>gi|342321094|gb|EGU13031.1| ATP-dependent RNA helicase ROK1 [Rhodotorula glutinis ATCC 204091]
Length = 650
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/170 (48%), Positives = 105/170 (61%), Gaps = 12/170 (7%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-- 70
K DILI+TPLRL AI+ + LS +L+LDEADKLFE+ N L+ D ++ AC+
Sbjct: 293 KGPIDILITTPLRLVFAIKSGTVSLSATSHLILDEADKLFEL-NFLEQTDEILAACAKDR 351
Query: 71 PS----IVRSLFSATLPDFVEELARSIMHDA----VRVIVGRKNTASESIKQKLVFAGSE 122
P+ I + +FSAT+P VEELA+ +M A VR IVG K A+ +I Q L F +E
Sbjct: 352 PAEAGEIRKGMFSATVPSSVEELAKGVMAGAGSGMVRAIVGHKEAATSTIDQTLSFVNTE 411
Query: 123 EGKLLALRQSF-AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSD 171
+ KLL+LR PPVLIFVQS RAKEL EL FD I A IH+D
Sbjct: 412 DHKLLSLRSMIQGGQFTPPVLIFVQSIQRAKELANELVFDGINADAIHAD 461
>gi|237840157|ref|XP_002369376.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
gi|211967040|gb|EEB02236.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
gi|221483063|gb|EEE21387.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii GT1]
gi|221503995|gb|EEE29672.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii VEG]
Length = 652
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/161 (47%), Positives = 108/161 (67%), Gaps = 5/161 (3%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
D +++TPLRL +R ++ L++ ++VLDEADKL ++G L D ++ C+ PS+ S
Sbjct: 343 DAVVTTPLRLVQFLRDGRVSLAQCRHIVLDEADKLLDLGQL----DEILAGCTFPSLQVS 398
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ-SFAE 135
LFSATLP V LA S++H+ V + +G N A+ SI+Q+L+F +EEGKLLALR
Sbjct: 399 LFSATLPPDVLRLADSLLHNPVHISIGSPNAAATSIEQELLFCTNEEGKLLALRTLHLTG 458
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
PPVLIFVQSK+RAK+LY EL +D I IH+D ++ Q
Sbjct: 459 KFVPPVLIFVQSKERAKQLYCELVYDGIFVECIHADKTKKQ 499
>gi|260799746|ref|XP_002594845.1| hypothetical protein BRAFLDRAFT_124435 [Branchiostoma floridae]
gi|229280082|gb|EEN50856.1| hypothetical protein BRAFLDRAFT_124435 [Branchiostoma floridae]
Length = 724
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 110/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRRKK--IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ + L VE+LV+DE+DKLFE G + + +AC +
Sbjct: 332 DILVTTPNRLVYMLKQDPPIVSLHSVEWLVVDESDKLFEEGKQGFRDQLGVIYQACDSSH 391
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + V V +G +N+A ++++Q+L+F GSE GKLLA+R+
Sbjct: 392 VRRAMFSATFAYDVEQWCKVNLDNVVTVSIGARNSAVDTVEQQLLFVGSESGKLLAMREL 451
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L PPVLIFVQSK+RAKEL+ EL +D I VIH+D +QTQ
Sbjct: 452 VRKGLTPPVLIFVQSKERAKELFHELIYDGINVDVIHADRTQTQ 495
>gi|45768538|gb|AAH67608.1| Ddx52 protein [Danio rerio]
Length = 501
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 109/164 (66%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL + + I+LS VE+LV+DE+DKLFE G + + + ACS+P+
Sbjct: 184 DILVTTPNRLIYLLNQDPPAINLSSVEWLVVDESDKLFEDGKTGFREQLATIFLACSSPN 243
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R LFSAT VE + + + V V +G +N+A+E+++Q+L+F GSE GK+LA+R
Sbjct: 244 VRRVLFSATFATDVERWCKLNLDNLVSVSIGARNSAAETVEQQLLFVGSENGKILAMRNL 303
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ PPVL+FVQS DRA+ELY EL ++ I VIH+D +Q Q
Sbjct: 304 IKQGFLPPVLVFVQSIDRARELYHELVYEGINVDVIHADRTQQQ 347
>gi|113195544|ref|NP_001037780.1| probable ATP-dependent RNA helicase DDX52 [Danio rerio]
gi|109150086|gb|AAI17611.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Danio rerio]
gi|182892172|gb|AAI65190.1| Ddx52 protein [Danio rerio]
Length = 606
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 109/164 (66%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL + + I+LS VE+LV+DE+DKLFE G + + + ACS+P+
Sbjct: 289 DILVTTPNRLIYLLNQDPPAINLSSVEWLVVDESDKLFEDGKTGFREQLATIFLACSSPN 348
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R LFSAT VE + + + V V +G +N+A+E+++Q+L+F GSE GK+LA+R
Sbjct: 349 VRRVLFSATFATDVERWCKLNLDNLVSVSIGARNSAAETVEQQLLFVGSENGKILAMRNL 408
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ PPVL+FVQS DRA+ELY EL ++ I VIH+D +Q Q
Sbjct: 409 IKQGFLPPVLVFVQSIDRARELYHELVYEGINVDVIHADRTQQQ 452
>gi|119351039|gb|ABL63415.1| ATP-dependent RNA helicase [Rattus norvegicus]
Length = 598
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 112/164 (68%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRRK--KIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL ++++ IDL+ VE+LV+DE+DKLFE G + + AC++P
Sbjct: 288 DILVTTPNRLIYLLKQEPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSPK 347
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + V V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 348 VRRAMFSATFAYDVEQWCKLNLDNIVSVSIGARNSAVETVEQELLFVGSETGKLLAMREL 407
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ NPPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 408 VKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 451
>gi|16758984|ref|NP_445977.1| probable ATP-dependent RNA helicase DDX52 [Rattus norvegicus]
gi|34582286|sp|Q99PT0.1|DDX52_RAT RecName: Full=Probable ATP-dependent RNA helicase DDX52; AltName:
Full=ATP-dependent RNA helicase ROK1-like; Short=rROK1L;
AltName: Full=DEAD box protein 52
gi|12862376|dbj|BAB32441.1| ROK1-like protein [Rattus norvegicus]
gi|149053684|gb|EDM05501.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Rattus norvegicus]
Length = 598
Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 112/164 (68%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRRK--KIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL ++++ IDL+ VE+LV+DE+DKLFE G + + AC++P
Sbjct: 288 DILVTTPNRLIYLLKQEPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSPK 347
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + V V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 348 VRRAMFSATFAYDVEQWCKLNLDNIVSVSIGARNSAVETVEQELLFVGSETGKLLAMREL 407
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ NPPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 408 VKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 451
>gi|58177858|gb|AAH89107.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Rattus norvegicus]
Length = 598
Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 112/164 (68%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRRK--KIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL ++++ IDL+ VE+LV+DE+DKLFE G + + AC++P
Sbjct: 288 DILVTTPNRLIYLLKQEPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSPK 347
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + V V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 348 VRRAMFSATFAYDVEQWCKLNLDNIVSVSIGARNSAVETVEQELLFVGSETGKLLAMREL 407
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ NPPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 408 VKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 451
>gi|119351037|gb|ABL63414.1| ATP-dependent RNA helicase [Rattus norvegicus]
Length = 598
Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 112/164 (68%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRRK--KIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL ++++ IDL+ VE+LV+DE+DKLFE G + + AC++P
Sbjct: 288 DILVTTPNRLIYLLKQEPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSPK 347
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + V V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 348 VRRAMFSATFAYDVEQWCKLNLDNIVSVSIGARNSAVETVEQELLFVGSETGKLLAMREL 407
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ NPPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 408 VKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 451
>gi|81294184|gb|AAI08030.1| Ddx52 protein [Danio rerio]
Length = 588
Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 109/164 (66%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL + + I+LS VE+LV+DE+DKLFE G + + + ACS+P+
Sbjct: 289 DILVTTPNRLIYLLNQDPPAINLSSVEWLVVDESDKLFEDGKTGFREQLATIFLACSSPN 348
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R LFSAT VE + + + V V +G +N+A+E+++Q+L+F GSE GK+LA+R
Sbjct: 349 VRRVLFSATFATDVERWCKLNLDNLVSVSIGARNSAAETVEQQLLFVGSENGKILAMRNL 408
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ PPVL+FVQS DRA+ELY EL ++ I VIH+D +Q Q
Sbjct: 409 IKQGFLPPVLVFVQSIDRARELYHELVYEGINVDVIHADRTQQQ 452
>gi|383855221|ref|XP_003703115.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like
[Megachile rotundata]
Length = 589
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 107/164 (65%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVGN--LLKHIDPVVKACSNPS 72
DILI+TP R+ + + I VE+L++DEADKLFE G ++ + KAC+N +
Sbjct: 260 DILITTPRRIIFLLSQDPPAISFKNVEWLIVDEADKLFEDGTRCFRDQMETISKACTNEN 319
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT V + R + V + VG +N A++S++Q+L+F G E GKL+ALR
Sbjct: 320 LRRAMFSATNTPVVTKWCRHNLKGLVTITVGHRNAATDSVEQELLFVGEEGGKLVALRNI 379
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + PPVL+FVQSK+RA+EL+ EL +D I VIH+D +QTQ
Sbjct: 380 IQKGVLPPVLVFVQSKERAQELFNELIYDGINVDVIHADRTQTQ 423
>gi|158300210|ref|XP_001689233.1| AGAP012358-PB [Anopheles gambiae str. PEST]
gi|158300212|ref|XP_320199.4| AGAP012358-PA [Anopheles gambiae str. PEST]
gi|157013048|gb|EDO63299.1| AGAP012358-PB [Anopheles gambiae str. PEST]
gi|157013049|gb|EAA00143.4| AGAP012358-PA [Anopheles gambiae str. PEST]
Length = 598
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/164 (46%), Positives = 107/164 (65%), Gaps = 4/164 (2%)
Query: 15 SCDILISTPLRL--RLAIRRKKIDLSRVEYLVLDEADKLFE--VGNLLKHIDPVVKACSN 70
S DIL++TP R+ L+ KIDLS ++++V+DEADKLFE + +D V+ AC+N
Sbjct: 263 SYDILVTTPNRICYLLSQNPPKIDLSNIQWVVIDEADKLFEDSKNSFRDQLDTVLTACNN 322
Query: 71 PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
PS +LFSAT V + + +R +G N A E + QKL+F GSE GKLLA R
Sbjct: 323 PSKTIALFSATQTRDVNLWVAKNVPNRIRFSIGLINGAVELVDQKLLFTGSESGKLLAFR 382
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ A+ L+PPVL+FVQSKDRA++L+ EL +D + VIHSD +Q
Sbjct: 383 EMVAQGLHPPVLVFVQSKDRAQQLFTELIYDGLNVDVIHSDRTQ 426
>gi|332374956|gb|AEE62619.1| unknown [Dendroctonus ponderosae]
Length = 588
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 110/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVGN--LLKHIDPVVKACSNPS 72
DILI+TP RL +++ I LS V++LV+DEADKLFE G+ +D +++ACS+
Sbjct: 240 DILITTPNRLCFLLKQDPPAIQLSNVQWLVIDEADKLFEEGSRSFRDQLDQILQACSSSD 299
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
++FSAT V + M +RV VG++N A++++ QKL F GSE+GKL+A+R
Sbjct: 300 RKVAMFSATHTPVVAKWCVHNMPGLLRVTVGQRNAATDTVDQKLQFVGSEQGKLIAIRDL 359
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ ++PPVLIFVQSK+RA++L+ EL +D I IH+D +QTQ
Sbjct: 360 IRQGISPPVLIFVQSKERAQQLFNELIYDGIMVDAIHADRTQTQ 403
>gi|345480251|ref|XP_001607535.2| PREDICTED: probable ATP-dependent RNA helicase DDX52-like [Nasonia
vitripennis]
Length = 643
Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats.
Identities = 75/164 (45%), Positives = 109/164 (66%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRRK--KIDLSRVEYLVLDEADKLFEVGN--LLKHIDPVVKACSNPS 72
DILI+TP RL + ++ I L+ VE+L++DEADKLFE G ++ + KAC+N +
Sbjct: 260 DILITTPKRLVFLLNQEPPAISLNNVEWLIVDEADKLFEEGTRGFKNQLEEISKACTNEN 319
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
I R +FSAT V + R + V V +G++N+A++ ++Q+L+F GSE GKL+A R
Sbjct: 320 IRRGMFSATNTPAVTKWCRHNLKGLVTVTIGQRNSAADLVEQQLLFVGSERGKLVAFRNI 379
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L PPVL+FVQSK+RA+EL+ EL +D I +IHSD +QTQ
Sbjct: 380 IQRGLTPPVLVFVQSKERAQELFKELIYDGINVDLIHSDRTQTQ 423
>gi|170056673|ref|XP_001864136.1| DEAD-box ATP-dependent RNA helicase 57 [Culex quinquefasciatus]
gi|167876423|gb|EDS39806.1| DEAD-box ATP-dependent RNA helicase 57 [Culex quinquefasciatus]
Length = 572
Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 106/162 (65%), Gaps = 4/162 (2%)
Query: 17 DILISTPLRLRLAIRRKK--IDLSRVEYLVLDEADKLFEV--GNLLKHIDPVVKACSNPS 72
DIL++TP R+ IDLS ++++V+DEADKLFE + + +D ++ AC+NP
Sbjct: 262 DILVTTPNRVCFLAGHNPPLIDLSNIQFVVVDEADKLFEESRNSFREQLDTIMAACTNPC 321
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
V + FSAT+ V AR M VR VG NTA++ + Q+L+F G+E GKLLA R++
Sbjct: 322 KVVAFFSATVTKEVSAWARDHMPTRVRFSVGAVNTATDLVDQELLFVGNESGKLLAFREA 381
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ L PPVL+FVQSKDRA++L+ EL +D + VIH+D SQ
Sbjct: 382 VHKGLTPPVLVFVQSKDRAQQLFTELLYDGLNVDVIHADRSQ 423
>gi|432113623|gb|ELK35905.1| Putative ATP-dependent RNA helicase DDX52 [Myotis davidii]
Length = 581
Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 110/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL ++R IDL+ VE+LV+DE+DKLFE G + + AC++
Sbjct: 287 DILVTTPNRLIYLLKRDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHK 346
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + + V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 347 VRRAMFSATFAYDVEQWCKLNLDNVITVSIGARNSAVETVEQELLFVGSETGKLLAMREL 406
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ NPPVL+FVQS +RAKEL+ EL ++ I VIH+D +Q Q
Sbjct: 407 IKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHADRTQEQ 450
>gi|339234397|ref|XP_003382315.1| DEAD-box ATP-dependent RNA helicase 57 [Trichinella spiralis]
gi|316978689|gb|EFV61638.1| DEAD-box ATP-dependent RNA helicase 57 [Trichinella spiralis]
Length = 627
Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 75/175 (42%), Positives = 110/175 (62%), Gaps = 6/175 (3%)
Query: 4 ELVRSTDLSKFSCDILISTPLRLRLAIRRKK--IDLSRVEYLVLDEADKLFEVGNLLKHI 61
+L + K + DI+++TP RL A ++ + +L+ + +L++DE DKLFE G+
Sbjct: 291 QLEDENNFDKENFDIMVTTPNRLIYAQQQSQPLYNLNTIRWLIIDECDKLFESGDRGFR- 349
Query: 62 DPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGS 121
+ C I R LFSAT +E+ + ++D V V VG +N+A +S+KQ+LVF GS
Sbjct: 350 ---KQQCDTVKIRRLLFSATFSYELEQWCKINLNDMVMVCVGARNSAVQSVKQELVFVGS 406
Query: 122 EEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E GK+LALR F E PPVLIFVQSKDRA++LY E FD+++ IHSDL + +
Sbjct: 407 EHGKVLALRNMFIEGFTPPVLIFVQSKDRAEQLYNEFKFDEVKIDYIHSDLPKKE 461
>gi|281346401|gb|EFB21985.1| hypothetical protein PANDA_014345 [Ailuropoda melanoleuca]
Length = 524
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 111/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRRK--KIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+LV+DE+DKLFE G + + AC++
Sbjct: 286 DILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHK 345
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + + V +G +N+A+E+++Q+L+F GSE GKLLA+R+
Sbjct: 346 VRRAMFSATFAYDVEQWCKLNLDNVITVSIGARNSAAETVEQELLFVGSETGKLLAMREL 405
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ NPPVL+FVQS +RAKEL+ EL ++ I VIH+D +Q Q
Sbjct: 406 VKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHADRTQQQ 449
>gi|301779033|ref|XP_002924934.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like
[Ailuropoda melanoleuca]
Length = 598
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 111/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+LV+DE+DKLFE G + + AC++
Sbjct: 286 DILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHK 345
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + + V +G +N+A+E+++Q+L+F GSE GKLLA+R+
Sbjct: 346 VRRAMFSATFAYDVEQWCKLNLDNVITVSIGARNSAAETVEQELLFVGSETGKLLAMREL 405
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ NPPVL+FVQS +RAKEL+ EL ++ I VIH+D +Q Q
Sbjct: 406 VKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHADRTQQQ 449
>gi|26348749|dbj|BAC38014.1| unnamed protein product [Mus musculus]
Length = 579
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 111/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+LV+DE+DKLFE G + + + AC++P
Sbjct: 288 DILVTTPNRLIYLLKQDPPGIDLTNVEWLVVDESDKLFEDGKTGFREQLASIFLACTSPK 347
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + V V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 348 VRRAMFSATFAYDVEQWCKLNLDNVVSVSIGARNSAVETVEQELLFVGSETGKLLAMREL 407
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ PPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 408 VKKGFKPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 451
>gi|256985213|ref|NP_084372.2| probable ATP-dependent RNA helicase DDX52 [Mus musculus]
gi|341940434|sp|Q8K301.2|DDX52_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX52; AltName:
Full=ATP-dependent RNA helicase ROK1-like; AltName:
Full=DEAD box protein 52
gi|74225794|dbj|BAE21716.1| unnamed protein product [Mus musculus]
gi|148683781|gb|EDL15728.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Mus musculus]
Length = 598
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 111/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+LV+DE+DKLFE G + + + AC++P
Sbjct: 288 DILVTTPNRLIYLLKQDPPGIDLTNVEWLVVDESDKLFEDGKTGFREQLASIFLACTSPK 347
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + V V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 348 VRRAMFSATFAYDVEQWCKLNLDNVVSVSIGARNSAVETVEQELLFVGSETGKLLAMREL 407
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ PPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 408 VKKGFKPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 451
>gi|74177868|dbj|BAE39019.1| unnamed protein product [Mus musculus]
Length = 595
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 111/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+LV+DE+DKLFE G + + + AC++P
Sbjct: 288 DILVTTPNRLIYLLKQDPPGIDLTNVEWLVVDESDKLFEDGKTGFREQLASIFLACTSPK 347
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + V V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 348 VRRAMFSATFAYDVEQWCKLNLDNVVSVSIGARNSAVETVEQELLFVGSETGKLLAMREL 407
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ PPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 408 VKKGFKPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 451
>gi|157073998|ref|NP_001096708.1| probable ATP-dependent RNA helicase DDX52 [Bos taurus]
gi|160380636|sp|A5D7C1.1|DDX52_BOVIN RecName: Full=Probable ATP-dependent RNA helicase DDX52; AltName:
Full=DEAD box protein 52
gi|146186791|gb|AAI40502.1| DDX52 protein [Bos taurus]
gi|296477012|tpg|DAA19127.1| TPA: probable ATP-dependent RNA helicase DDX52 [Bos taurus]
gi|440912331|gb|ELR61911.1| Putative ATP-dependent RNA helicase DDX52 [Bos grunniens mutus]
Length = 596
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 109/164 (66%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+LV+DE+DKLFE G + + AC++
Sbjct: 285 DILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHK 344
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ R + + V VG +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 345 VKRAMFSATFAYDVEQWCRLNLDSVITVSVGARNSAVETVEQELLFVGSETGKLLAMREL 404
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ NPPVL+FVQS +RAKEL+ EL ++ I VIH+D +Q Q
Sbjct: 405 VKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHADRTQQQ 448
>gi|195021969|ref|XP_001985492.1| GH14471 [Drosophila grimshawi]
gi|193898974|gb|EDV97840.1| GH14471 [Drosophila grimshawi]
Length = 603
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 110/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRRKK--IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DILISTP R+R ++++ +DL +E+ VLDEAD+L E G N + +D + AC++
Sbjct: 244 DILISTPNRVRFMLQQQPPLLDLKGIEWFVLDEADRLMEEGQNNFKEQLDDIYAACTHAQ 303
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ FSAT V + A + + VR+ +G +N+A+++++Q+L+F GSE GKLLA+R+
Sbjct: 304 KRVAFFSATYTVPVAKWALRHLKNLVRITIGVQNSATDTVQQELLFVGSESGKLLAVREM 363
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L PPVL+FVQSK+RAK+L+ EL +D I VIH++ +Q Q
Sbjct: 364 VRNGLQPPVLVFVQSKERAKQLFEELLYDGINVDVIHAERTQHQ 407
>gi|157134089|ref|XP_001663141.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108870607|gb|EAT34832.1| AAEL012962-PA [Aedes aegypti]
Length = 591
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 104/164 (63%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRRKK--IDLSRVEYLVLDEADKLFE--VGNLLKHIDPVVKACSNPS 72
DIL++TP R+ IDLS ++Y+V+DEADKLFE + +D ++ AC+NP
Sbjct: 262 DILVTTPNRICFLANHDPPLIDLSNIQYIVVDEADKLFEESKNSFRDQLDSIMNACTNPC 321
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
V + FSAT+ V A M + VR VG N A + ++Q+L+F GSE GKLLA R+
Sbjct: 322 KVVAFFSATVTKEVTTWASENMPNRVRFSVGVANMAVDLVEQELLFVGSESGKLLAFREM 381
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L PPVL+FVQSKDRA++L+ EL +D + VIH+D SQ +
Sbjct: 382 VHKGLTPPVLVFVQSKDRAQQLFTELIYDGLNVDVIHADRSQKE 425
>gi|357627267|gb|EHJ77004.1| putative DEAD box ATP-dependent RNA helicase [Danaus plexippus]
Length = 421
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/168 (43%), Positives = 110/168 (65%), Gaps = 10/168 (5%)
Query: 17 DILISTPLRLRLAIRRKK--IDLSRVEYLVLDEADKLFE-----VGNLLKHIDPVVKACS 69
D++ISTP RL ++++ I++ +V++LV+DEADKLFE V + +D ++ +C
Sbjct: 255 DLVISTPNRLCYLLKQETVGINMDKVQWLVIDEADKLFEGSQEEVDTFRQQLDIILSSCK 314
Query: 70 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 129
+ ++FSAT + + AR M + + VG +N AS S++Q+L+F G+E GKL+A
Sbjct: 315 S---RLAMFSATHTPSIAKWARHNMRGLINITVGHRNAASSSVEQELLFCGNESGKLVAF 371
Query: 130 RQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQV 177
RQ + L PPVL+FVQSKDRAKEL+ EL +D I+ VIH D +Q QV
Sbjct: 372 RQLIQKGLKPPVLVFVQSKDRAKELFKELLYDGIQVDVIHGDRTQAQV 419
>gi|242005744|ref|XP_002423722.1| predicted protein [Pediculus humanus corporis]
gi|212506907|gb|EEB10984.1| predicted protein [Pediculus humanus corporis]
Length = 1130
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 106/164 (64%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRRK--KIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DILI+TP RL ++++ K++L VE+L++DE+DKLFE G + + AC +
Sbjct: 873 DILITTPNRLVYLLKQEPPKVNLKSVEWLIVDESDKLFEAGIRGFRDQLAVIYNACDSSV 932
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
I R++FSAT + + R + + V + VG +N+A E++KQ+L+F G E GKL+A R
Sbjct: 933 IKRAMFSATQTPHLTKWCRRNLKNLVLINVGVRNSAVETVKQELLFVGCEAGKLVAFRNL 992
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L PPVL+FVQSK+RA+EL+ EL +D I VIHSD +Q Q
Sbjct: 993 INRGLTPPVLVFVQSKERAQELFNELVYDGINVDVIHSDRTQKQ 1036
>gi|410915742|ref|XP_003971346.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like [Takifugu
rubripes]
Length = 628
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 107/164 (65%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DILISTP RL +++ +DLS VE+LV+DE+DKLFE G + + ACS
Sbjct: 302 DILISTPNRLVFLLKQDPPALDLSSVEWLVVDESDKLFEDGKTGFRDQLASIFLACSGSK 361
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R+ FSAT VE+ R + + V V +G +NTA E++ Q+L+F G+E GKLLA+R+
Sbjct: 362 VRRAFFSATCTSDVEQWCRLNLDNLVSVNIGPRNTAVETVDQELLFVGTENGKLLAVREI 421
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ PP+L+FVQSKDRA+EL+ EL ++ I VIH++ +Q Q
Sbjct: 422 IKKGFLPPMLVFVQSKDRARELFHELVYEGINVDVIHAERTQQQ 465
>gi|345330125|ref|XP_003431468.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like
[Ornithorhynchus anatinus]
Length = 840
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 112/164 (68%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRRKK--IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL + ++ IDL+RVE+LV+DE+DKLFE G + + AC++P
Sbjct: 523 DILVTTPNRLIYLLNQEPPGIDLTRVEWLVVDESDKLFEDGKSGFRDQLASIFLACTSPK 582
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + + V +G +N+A+E+++Q+L+F GSE GKLLA+R
Sbjct: 583 VRRAMFSATFAHDVEQWCKLNLDNIISVSIGARNSAAETVEQELLFVGSETGKLLAMRDL 642
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ +PPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 643 VKKGFSPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 686
>gi|20809366|gb|AAH29094.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Mus musculus]
Length = 598
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 111/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+LV+DE+DKLFE G + + + AC++P
Sbjct: 288 DILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESDKLFEDGKTGFREQLASIFLACTSPK 347
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + + V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 348 VRRAMFSATFAYDVEQWCKLNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAMREL 407
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ PPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 408 VKKGFKPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 451
>gi|426237078|ref|XP_004012488.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Ovis aries]
Length = 598
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 110/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+LV+DE+DKLFE G + + AC++
Sbjct: 287 DILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHK 346
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + + V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 347 VKRAMFSATFAYDVEQWCKLNLDNVITVSIGARNSAVETVEQELLFVGSETGKLLAMREL 406
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ NPPVL+FVQS +RAKEL+ EL ++ I VIH+D +Q Q
Sbjct: 407 VKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHADRTQQQ 450
>gi|47227152|emb|CAG00514.1| unnamed protein product [Tetraodon nigroviridis]
Length = 649
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 109/164 (66%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DILISTP RL +++ +DLS VE+LV+DE+DKLFE G + + + ACS
Sbjct: 300 DILISTPNRLIFLLKQDPPALDLSSVEWLVVDESDKLFEDGKTGFREQLATIFLACSGSK 359
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R+ FSAT VE+ R + + V V +G +NTA E+++Q+L+F G+E GKLLA+R+
Sbjct: 360 VRRAFFSATCTSDVEQWCRLNLDNLVSVNIGPRNTAVETVEQELLFVGTENGKLLAVREI 419
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ PP+L+FVQSK+RA+EL+ EL ++ I VIH++ +Q Q
Sbjct: 420 IKKGFLPPMLVFVQSKERARELFHELVYEGINVDVIHAERTQQQ 463
>gi|332020434|gb|EGI60854.1| Putative ATP-dependent RNA helicase DDX52 [Acromyrmex echinatior]
Length = 558
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 106/164 (64%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DILI+TP RL + + I L+ VE+L++DEADKLFE G + ++ + KAC + +
Sbjct: 254 DILITTPKRLVFLLNQDPPAISLNNVEWLIVDEADKLFEEGIRGFREQLEEITKACVSTN 313
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ S+FSAT V + R M + V VG++N A++ + QKL+F GSE GKL+ R
Sbjct: 314 LRCSMFSATNTPAVSKWCRRNMKGLITVTVGQRNAAADLVDQKLLFVGSERGKLVEFRNI 373
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ ++PPVL+FVQSK+RA+EL+ EL +D I VIH+D + TQ
Sbjct: 374 IQKGISPPVLVFVQSKERAQELFNELIYDGINVDVIHADRTMTQ 417
>gi|355683377|gb|AER97087.1| DEAD box polypeptide 52 [Mustela putorius furo]
Length = 598
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 110/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+LV+DE+DKLFE G + + AC++
Sbjct: 287 DILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHK 346
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + + V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 347 VRRAMFSATFAYDVEQWCKLNLDNVITVSIGARNSAVETVEQELLFVGSETGKLLAMREL 406
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ NPPVL+FVQS +RAKEL+ EL ++ I VIH+D +Q Q
Sbjct: 407 VKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHADRTQQQ 450
>gi|73966874|ref|XP_852958.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Canis lupus
familiaris]
Length = 598
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 110/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+LV+DE+DKLFE G + + AC++
Sbjct: 286 DILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHK 345
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + + V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 346 VRRAMFSATFAYDVEQWCKLNLDNVITVSIGARNSAVETVEQELLFVGSETGKLLAMREL 405
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ NPPVL+FVQS +RAKEL+ EL ++ I VIH+D +Q Q
Sbjct: 406 VKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHADRTQQQ 449
>gi|410076108|ref|XP_003955636.1| hypothetical protein KAFR_0B02030 [Kazachstania africana CBS 2517]
gi|372462219|emb|CCF56501.1| hypothetical protein KAFR_0B02030 [Kazachstania africana CBS 2517]
Length = 571
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 112/163 (68%), Gaps = 4/163 (2%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS--NPSIV 74
DI+I+TPLRL + + +DL+ + +L+ DEADKLF+ ++ D ++ S N +
Sbjct: 256 DIIITTPLRLIDLLNAEALDLNNLRHLIFDEADKLFD-KTFVEQSDSILSLISAKNLKLR 314
Query: 75 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
+S++SAT+P +E++A+S+M D VRVI+G K +A+ I+QKLV+ G+EEGKL+A+RQ
Sbjct: 315 KSMYSATIPSHIEDIAKSLMLDPVRVIIGHKESANSDIEQKLVYCGNEEGKLIAIRQLVQ 374
Query: 135 ES-LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E PPV+IF++S RAK LY EL +D + VIH++ + TQ
Sbjct: 375 EGEFKPPVVIFLESIVRAKALYHELMYDRMNVDVIHAERTATQ 417
>gi|401398472|ref|XP_003880323.1| putative ATP-dependent RNA helicase [Neospora caninum Liverpool]
gi|325114733|emb|CBZ50289.1| putative ATP-dependent RNA helicase [Neospora caninum Liverpool]
Length = 685
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/161 (45%), Positives = 105/161 (65%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
D + +TPLRL +R ++ L++ +LVLDEADKL ++G +D ++ C+ P +
Sbjct: 373 DAVATTPLRLVQFLRDGRVSLAQCRHLVLDEADKLLDLG-FAPQLDEILAGCTFPRLQVC 431
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ-SFAE 135
LFSATLP V LA S++H+ V + +G N A+ SI+Q+L+F +EEGKLLALR
Sbjct: 432 LFSATLPPEVLRLADSLLHNPVHISIGAPNAAATSIEQELLFCTNEEGKLLALRTLHLTG 491
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
PPVLIFVQSK+RAK+LY EL +D I IH+D ++ Q
Sbjct: 492 KFVPPVLIFVQSKERAKQLYCELVYDGIFVECIHADKTKKQ 532
>gi|335298081|ref|XP_003358192.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Sus scrofa]
Length = 599
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 110/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+LV+DE+DKLFE G + + AC++
Sbjct: 287 DILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHK 346
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + + V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 347 VKRAMFSATFAYDVEQWCKLNLDNVITVSIGARNSAVETVEQELLFVGSETGKLLAMREL 406
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ NPPVL+FVQS +RAKEL+ EL ++ I VIH+D +Q Q
Sbjct: 407 VKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHADRTQQQ 450
>gi|348567701|ref|XP_003469637.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like [Cavia
porcellus]
Length = 594
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 109/164 (66%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+LV+DE+DKLFE G + + AC++
Sbjct: 282 DILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHQ 341
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ R + + + V +G +N+A E++ Q+L+F GSE GKLLA+R+
Sbjct: 342 VRRAMFSATFAYDVEQWCRLNLDNVITVSIGARNSAVETVDQELLFVGSETGKLLAMREL 401
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ NPPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 402 VKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 445
>gi|349603916|gb|AEP99614.1| putative ATP-dependent RNA helicase DDX52-like protein, partial
[Equus caballus]
Length = 512
Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 110/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+L++DE+DKLFE G + + AC++
Sbjct: 200 DILVTTPNRLIYLLKQDPPGIDLTSVEWLIVDESDKLFEDGKTGFRDQLASIFLACTSHK 259
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + + V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 260 VRRAMFSATFAYDVEQWCKLNLDNVITVSIGARNSAVETVEQELLFVGSETGKLLAMREL 319
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ NPPVL+FVQS +RAKEL+ EL ++ + VIH+D +Q Q
Sbjct: 320 VKKGFNPPVLVFVQSIERAKELFRELIYEGVNVDVIHADRTQQQ 363
>gi|291405635|ref|XP_002719293.1| PREDICTED: ATP-dependent RNA helicase ROK1 [Oryctolagus cuniculus]
Length = 599
Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 110/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+LV+DE+DKLFE G + + AC++
Sbjct: 287 DILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHK 346
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + + V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 347 VKRAMFSATFAYDVEQWCKLNLDNVITVSIGARNSAVETVEQELLFVGSETGKLLAMREL 406
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ NPPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 407 VKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 450
>gi|397494236|ref|XP_003817990.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 isoform 1 [Pan
paniscus]
Length = 413
Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 110/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+LV+DE+DKLFE G + + AC++
Sbjct: 101 DILVTTPNRLIYLLKQDPPGIDLASVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHK 160
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + + V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 161 VRRAMFSATFAYDVEQWCKLNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAMREL 220
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ NPPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 221 VKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 264
>gi|395748896|ref|XP_003778849.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 isoform 2
[Pongo abelii]
Length = 491
Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 110/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+LV+DE+DKLFE G + + AC++
Sbjct: 179 DILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHK 238
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + + V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 239 VRRAMFSATFAYDVEQWCKLNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAMREL 298
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ NPPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 299 VKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 342
>gi|193632062|ref|XP_001950933.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like
[Acyrthosiphon pisum]
Length = 528
Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 109/164 (66%), Gaps = 5/164 (3%)
Query: 17 DILISTPLRLRLAIRRKK--IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DILI+TP RL ++++ ++L+ +E+L++DE+DKLFE G + + KAC P+
Sbjct: 176 DILIATPNRLVFLLQQEPPAVELNNIEWLIIDESDKLFETGVRGFRDQLAIIYKACG-PN 234
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
R++FSAT V + ++ + + V VG +NT + ++Q+LVF G+EEGKL+A+R
Sbjct: 235 AKRAMFSATYTVEVAKWSKKNLDGLIAVTVGNRNTTTTMVEQELVFVGNEEGKLIAMRDL 294
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L+PPVLIF+QSK+RAKEL+ EL +D I IH+D +Q Q
Sbjct: 295 VKKGLSPPVLIFLQSKERAKELFSELIYDGINVDAIHADRTQQQ 338
>gi|297700670|ref|XP_002827359.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 isoform 1
[Pongo abelii]
Length = 600
Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 110/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+LV+DE+DKLFE G + + AC++
Sbjct: 288 DILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHK 347
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + + V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 348 VRRAMFSATFAYDVEQWCKLNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAMREL 407
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ NPPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 408 VKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 451
>gi|426348586|ref|XP_004041913.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Gorilla
gorilla gorilla]
Length = 551
Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 110/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRRK--KIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+LV+DE+DKLFE G + + AC++
Sbjct: 239 DILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHK 298
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + + V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 299 VRRAMFSATFAYDVEQWCKLNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAMREL 358
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ NPPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 359 VKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 402
>gi|296201956|ref|XP_002748362.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Callithrix
jacchus]
Length = 575
Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 110/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRRK--KIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+LV+DE+DKLFE G + + AC++
Sbjct: 287 DILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHK 346
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + + V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 347 VRRAMFSATFAYDVEQWCKLNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAMREL 406
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ NPPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 407 VKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 450
>gi|348518535|ref|XP_003446787.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like
[Oreochromis niloticus]
Length = 616
Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 107/164 (65%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL+STP RL +++ IDLS VE+L++DE+DKLFE G + + + ACS P
Sbjct: 306 DILVSTPNRLIFLLKQDPPAIDLSSVEWLIVDESDKLFEDGKTGFREQLATIFLACSGPK 365
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R+ FSAT VE+ R + + V V +G +NTA +++ Q+L+F G+E GKL+A+R
Sbjct: 366 VRRAFFSATCTADVEQWCRLNLDNLVSVNIGHRNTAVDTVDQQLLFVGTENGKLVAMRDI 425
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ PP+L+FVQ+ +RA+EL+ EL ++ I VIH+D +Q Q
Sbjct: 426 IKKGFLPPMLVFVQTIERARELFHELVYEGINVDVIHADRTQQQ 469
>gi|149724020|ref|XP_001503919.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Equus
caballus]
Length = 597
Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 110/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+L++DE+DKLFE G + + AC++
Sbjct: 285 DILVTTPNRLIYLLKQDPPGIDLTSVEWLIVDESDKLFEDGKTGFRDQLASIFLACTSHK 344
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + + V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 345 VRRAMFSATFAYDVEQWCKLNLDNVITVSIGARNSAVETVEQELLFVGSETGKLLAMREL 404
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ NPPVL+FVQS +RAKEL+ EL ++ + VIH+D +Q Q
Sbjct: 405 VKKGFNPPVLVFVQSIERAKELFRELIYEGVNVDVIHADRTQQQ 448
>gi|62087456|dbj|BAD92175.1| ATP-dependent RNA helicase ROK1 isoform a variant [Homo sapiens]
Length = 512
Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 110/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+LV+DE+DKLFE G + + AC++
Sbjct: 286 DILVTTPNRLIYLLKQDPPGIDLASVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHK 345
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + + V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 346 VRRAMFSATFAYDVEQWCKLNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAMREL 405
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ NPPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 406 VKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 449
>gi|354497109|ref|XP_003510664.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like isoform 1
[Cricetulus griseus]
Length = 599
Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 110/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+LV+DE+DKLFE G + + AC++
Sbjct: 289 DILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHK 348
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + V V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 349 VKRAMFSATFAYDVEQWCKLNLDNVVTVSIGARNSAVETVEQELLFVGSETGKLLAMREL 408
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ NPPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 409 VKKVFNPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 452
>gi|397494238|ref|XP_003817991.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 isoform 2 [Pan
paniscus]
gi|410051505|ref|XP_003953105.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Pan
troglodytes]
Length = 491
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 110/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+LV+DE+DKLFE G + + AC++
Sbjct: 179 DILVTTPNRLIYLLKQDPPGIDLASVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHK 238
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + + V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 239 VRRAMFSATFAYDVEQWCKLNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAMREL 298
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ NPPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 299 VKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 342
>gi|354497111|ref|XP_003510665.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like isoform 2
[Cricetulus griseus]
Length = 601
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 110/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+LV+DE+DKLFE G + + AC++
Sbjct: 289 DILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHK 348
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + V V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 349 VKRAMFSATFAYDVEQWCKLNLDNVVTVSIGARNSAVETVEQELLFVGSETGKLLAMREL 408
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ NPPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 409 VKKVFNPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 452
>gi|355568613|gb|EHH24894.1| Putative ATP-dependent RNA helicase DDX52 [Macaca mulatta]
gi|355754079|gb|EHH58044.1| Putative ATP-dependent RNA helicase DDX52 [Macaca fascicularis]
Length = 599
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 110/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+LV+DE+DKLFE G + + AC++
Sbjct: 287 DILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHK 346
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + + V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 347 VRRAMFSATFAYDVEQWCKLNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAMREL 406
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ NPPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 407 VKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 450
>gi|380788803|gb|AFE66277.1| putative ATP-dependent RNA helicase DDX52 [Macaca mulatta]
gi|383415417|gb|AFH30922.1| putative ATP-dependent RNA helicase DDX52 [Macaca mulatta]
Length = 599
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 110/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+LV+DE+DKLFE G + + AC++
Sbjct: 287 DILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHK 346
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + + V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 347 VRRAMFSATFAYDVEQWCKLNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAMREL 406
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ NPPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 407 VKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 450
>gi|332258725|ref|XP_003278445.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Nomascus
leucogenys]
Length = 598
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 110/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+LV+DE+DKLFE G + + AC++
Sbjct: 286 DILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHK 345
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + + V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 346 VRRAMFSATFAYDVEQWCKLNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAMREL 405
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ NPPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 406 VKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 449
>gi|410980532|ref|XP_003996631.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Felis catus]
Length = 597
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 110/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+LV+DE+DKLFE G + + AC++
Sbjct: 285 DILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHK 344
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + + V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 345 VRRAMFSATFAYDVEQWCKLNLDNVITVSIGARNSAVETVEQELLFVGSETGKLLAMREL 404
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ NPPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 405 VKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 448
>gi|403346916|gb|EJY72868.1| hypothetical protein OXYTRI_06004 [Oxytricha trifallax]
Length = 613
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 73/158 (46%), Positives = 110/158 (69%), Gaps = 4/158 (2%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP-SI 73
SC+ILISTPL+L ++ K L+ +E+LV+DEADK+FE+G L+ +D +++ + I
Sbjct: 246 SCEILISTPLKLAELCQQYK--LNNLEFLVVDEADKMFELG-FLEQVDQILEQQNEQYKI 302
Query: 74 VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 133
+ LFSAT+ +EEL R+IM D +++ +G KN +++ I Q++ + G E+GKL LR+
Sbjct: 303 CKFLFSATMQPGIEELVRTIMEDPIKIQMGIKNASNQLIDQQIQYVGDEQGKLHTLRELL 362
Query: 134 AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSD 171
A+ PP+LIFVQSK RAKELY EL +D + VIH+D
Sbjct: 363 ADGFEPPMLIFVQSKHRAKELYHELIYDGLNVNVIHAD 400
>gi|38569505|ref|NP_008941.2| probable ATP-dependent RNA helicase DDX52 [Homo sapiens]
gi|296439375|sp|Q9Y2R4.3|DDX52_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX52; AltName:
Full=ATP-dependent RNA helicase ROK1-like; AltName:
Full=DEAD box protein 52
Length = 599
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 110/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+LV+DE+DKLFE G + + AC++
Sbjct: 287 DILVTTPNRLIYLLKQDPPGIDLASVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHK 346
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + + V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 347 VRRAMFSATFAYDVEQWCKLNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAMREL 406
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ NPPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 407 VKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 450
>gi|332847931|ref|XP_001173155.2| PREDICTED: probable ATP-dependent RNA helicase DDX52 isoform 2 [Pan
troglodytes]
gi|410211834|gb|JAA03136.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Pan troglodytes]
gi|410252896|gb|JAA14415.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Pan troglodytes]
gi|410307108|gb|JAA32154.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Pan troglodytes]
gi|410349923|gb|JAA41565.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Pan troglodytes]
Length = 599
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 110/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+LV+DE+DKLFE G + + AC++
Sbjct: 287 DILVTTPNRLIYLLKQDPPGIDLASVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHK 346
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + + V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 347 VRRAMFSATFAYDVEQWCKLNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAMREL 406
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ NPPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 407 VKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 450
>gi|403372410|gb|EJY86104.1| hypothetical protein OXYTRI_15906 [Oxytricha trifallax]
Length = 614
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 73/158 (46%), Positives = 110/158 (69%), Gaps = 4/158 (2%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP-SI 73
SC+ILISTPL+L ++ K L+ +E+LV+DEADK+FE+G L+ +D +++ + I
Sbjct: 246 SCEILISTPLKLAELCQQYK--LNNLEFLVVDEADKMFELG-FLEQVDQILEQQNEQYKI 302
Query: 74 VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 133
+ LFSAT+ +EEL R+IM D +++ +G KN +++ I Q++ + G E+GKL LR+
Sbjct: 303 CKFLFSATMQPGIEELVRTIMEDPIKIQMGIKNASNQLIDQQIQYVGDEQGKLHTLRELL 362
Query: 134 AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSD 171
A+ PP+LIFVQSK RAKELY EL +D + VIH+D
Sbjct: 363 ADGFEPPMLIFVQSKHRAKELYHELIYDGLNVNVIHAD 400
>gi|193785511|dbj|BAG50877.1| unnamed protein product [Homo sapiens]
gi|193786536|dbj|BAG51319.1| unnamed protein product [Homo sapiens]
Length = 413
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 110/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+LV+DE+DKLFE G + + AC++
Sbjct: 101 DILVTTPNRLIYLLKQDPPGIDLASVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHK 160
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + + V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 161 VRRAMFSATFAYDVEQWCKLNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAVREL 220
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ NPPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 221 VKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 264
>gi|431890891|gb|ELK01770.1| Putative ATP-dependent RNA helicase DDX52 [Pteropus alecto]
Length = 598
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 109/164 (66%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+LV+DE+DKLFE G + + AC++
Sbjct: 286 DILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHK 345
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + + V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 346 VRRAMFSATFAYDVEQWCKLNLDNVITVSIGARNSAVETVEQELLFVGSETGKLLAMREL 405
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ PPVL+FVQS +RAKEL+ EL ++ I VIH+D +Q Q
Sbjct: 406 IKKGFTPPVLVFVQSIERAKELFHELIYEGINVDVIHADRTQQQ 449
>gi|119578005|gb|EAW57601.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52, isoform CRA_c [Homo
sapiens]
Length = 491
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 110/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+LV+DE+DKLFE G + + AC++
Sbjct: 179 DILVTTPNRLIYLLKQDPPGIDLASVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHK 238
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + + V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 239 VRRAMFSATFAYDVEQWCKLNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAVREL 298
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ NPPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 299 VKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 342
>gi|291242221|ref|XP_002741008.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like
[Saccoglossus kowalevskii]
Length = 681
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 109/164 (66%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRRKK--IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL + + ++L+ VE+L++DE+DKLFE G + + + KAC +
Sbjct: 291 DILVTTPNRLVYMLNQHPPALNLTNVEWLIVDESDKLFEEGKQGFREQLALIYKACDSMQ 350
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + V +G++N A ++I+Q+L+F G E GKLLA+R
Sbjct: 351 VRRAMFSATFAYDVEQWCKLNLDNVASVTIGQRNAAVDTIEQELLFVGQEYGKLLAIRDI 410
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + PP+L+FVQSK+RAKEL+ EL +D I VIH+D +QTQ
Sbjct: 411 IRKGVQPPMLVFVQSKERAKELFLELIYDGINVDVIHADRTQTQ 454
>gi|7023040|dbj|BAA91812.1| unnamed protein product [Homo sapiens]
Length = 491
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 110/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+LV+DE+DKLFE G + + AC++
Sbjct: 179 DILVTTPNRLIYLLKQDPPGIDLASVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHK 238
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + + V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 239 VRRAMFSATFAYDVEQWCKLNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAVREL 298
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ NPPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 299 VKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 342
>gi|402899925|ref|XP_003912934.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Papio anubis]
Length = 599
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 109/164 (66%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+LV+DE+DKLFE G + + AC++
Sbjct: 287 DILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHK 346
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 347 VRRAMFSATFAYDVEQWCKLNLDSVISVSIGARNSAVETVEQELLFVGSETGKLLAMREL 406
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ NPPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 407 VKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 450
>gi|449479900|ref|XP_002199492.2| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Taeniopygia
guttata]
Length = 615
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 108/164 (65%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL ++ IDLS VE+LV+DE+DKLFE G + + + AC++
Sbjct: 293 DILVTTPNRLIYLLKEDPPAIDLSSVEWLVVDESDKLFEDGKSGFREQLGTIFLACTSHL 352
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
R+LFSAT VEE + + + V V VG +N+A+E+++Q+L+F GSE GKL A+R+
Sbjct: 353 ARRALFSATFAHDVEEWCKLNLDNVVLVSVGARNSAAETVEQELLFVGSETGKLTAMREL 412
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ PPVL+FVQS +RAKEL+ EL ++ I VIH+D +Q Q
Sbjct: 413 VKKGFAPPVLVFVQSIERAKELFHELIYEGINVDVIHADKTQQQ 456
>gi|27697141|gb|AAH41785.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Homo sapiens]
gi|119578004|gb|EAW57600.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52, isoform CRA_b [Homo
sapiens]
Length = 599
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 110/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+LV+DE+DKLFE G + + AC++
Sbjct: 287 DILVTTPNRLIYLLKQDPPGIDLASVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHK 346
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + + V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 347 VRRAMFSATFAYDVEQWCKLNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAVREL 406
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ NPPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 407 VKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 450
>gi|403274723|ref|XP_003929113.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Saimiri
boliviensis boliviensis]
Length = 597
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 110/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+LV+DE+DKLFE G + + AC++
Sbjct: 285 DILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHK 344
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ R + + + V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 345 VRRAMFSATFAYDVEQWCRLNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAMREL 404
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ +PPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 405 VKKGFSPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 448
>gi|403377916|gb|EAT36543.2| AAEL011378-PA, partial [Aedes aegypti]
Length = 322
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 95/144 (65%), Gaps = 2/144 (1%)
Query: 35 IDLSRVEYLVLDEADKLFE--VGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARS 92
IDLS ++Y+V+DEADKLFE + +D ++ AC+NP V + FSAT+ V A
Sbjct: 13 IDLSNIQYIVVDEADKLFEESKNSFRDQLDSIMNACTNPCKVVAFFSATVTKEVTTWASE 72
Query: 93 IMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKDRAK 152
M + VR VG N A + ++Q+L+F GSE GKLLA R+ + L PPVL+FVQSKDRA+
Sbjct: 73 NMPNRVRFSVGVANMAVDLVEQELLFVGSESGKLLAFREMVHKGLTPPVLVFVQSKDRAQ 132
Query: 153 ELYGELAFDDIRAGVIHSDLSQTQ 176
+L+ EL +D + VIH+D SQ +
Sbjct: 133 QLFTELIYDGLNVDVIHADRSQKE 156
>gi|109114658|ref|XP_001112113.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like [Macaca
mulatta]
Length = 599
Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 110/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+LV+DE++KLFE G + + AC++
Sbjct: 287 DILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESNKLFEDGKTGFRDQLASIFLACTSHK 346
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + + V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 347 VRRAMFSATFAYDVEQWCKLNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAMREL 406
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ NPPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 407 VKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 450
>gi|351696669|gb|EHA99587.1| Putative ATP-dependent RNA helicase DDX52, partial [Heterocephalus
glaber]
Length = 442
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 110/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+L++DE+DKLFE G + + AC++
Sbjct: 149 DILVTTPNRLIYLLKQDPPGIDLTSVEWLIVDESDKLFEDGKTGFRDQLASIFLACTSYQ 208
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + + V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 209 VRRAMFSATFAYDVEQWCKLNLDNVITVSIGARNSAVETVEQELLFVGSETGKLLAMREL 268
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ NPP+L+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 269 VKKGFNPPLLVFVQSIERAKELFHELIYEGINVDVIHAERTQEQ 312
>gi|157129199|ref|XP_001655321.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
Length = 376
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 95/144 (65%), Gaps = 2/144 (1%)
Query: 35 IDLSRVEYLVLDEADKLFE--VGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARS 92
IDLS ++Y+V+DEADKLFE + +D ++ AC+NP V + FSAT+ V A
Sbjct: 67 IDLSNIQYIVVDEADKLFEESKNSFRDQLDSIMNACTNPCKVVAFFSATVTKEVTTWASE 126
Query: 93 IMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKDRAK 152
M + VR VG N A + ++Q+L+F GSE GKLLA R+ + L PPVL+FVQSKDRA+
Sbjct: 127 NMPNRVRFSVGVANMAVDLVEQELLFVGSESGKLLAFREMVHKGLTPPVLVFVQSKDRAQ 186
Query: 153 ELYGELAFDDIRAGVIHSDLSQTQ 176
+L+ EL +D + VIH+D SQ +
Sbjct: 187 QLFTELIYDGLNVDVIHADRSQKE 210
>gi|157873736|ref|XP_001685372.1| putative RNA helicase [Leishmania major strain Friedlin]
gi|68128444|emb|CAJ08547.1| putative RNA helicase [Leishmania major strain Friedlin]
Length = 580
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 108/162 (66%), Gaps = 2/162 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEV-GNLLKHIDPVVKACSNPSIVR 75
DI I+TP R+ + +K +DLS V+YLV DE D+L++ + L ID ++ AC+ V
Sbjct: 253 DIFIATPGRILSLLEQKLLDLSNVQYLVFDEGDRLWDSRTDFLTVIDRILTACTRTDKVV 312
Query: 76 SLFSATLPDFVEELARSIMH-DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
SLF+ATL + VE ARS+M D VR+IV + +A+ +KQ+LVF G+E GK++A+R
Sbjct: 313 SLFTATLSEKVEAAARSVMGADPVRIIVHGRRSANTHVKQRLVFCGNELGKVVAMRNLVR 372
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E + PPVL+FVQS +R+KELY E+ + + ++H+ ++ Q
Sbjct: 373 EGITPPVLVFVQSVERSKELYEEIRMEGLHMAIMHAKMTVEQ 414
>gi|344285314|ref|XP_003414407.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like
[Loxodonta africana]
Length = 529
Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 110/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+LV+DE+DKLFE G + + AC++
Sbjct: 225 DILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHK 284
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + + V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 285 VRRAMFSATFAYDVEQWCKLNLDNVITVSIGARNSAVETVEQELLFVGSETGKLLAMREL 344
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ +PPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 345 VKKGFSPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 388
>gi|326931593|ref|XP_003211912.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like
[Meleagris gallopavo]
Length = 814
Score = 132 bits (331), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 108/164 (65%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+LV+DE+DKLFE G + + + AC++
Sbjct: 492 DILVTTPNRLIYLLKQDPPAIDLTSVEWLVVDESDKLFEDGKSGFREQLASIFLACTSHV 551
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R+ FSAT VEE + + V V VG +N+A+E+++Q+L+F GSE GKL A+R+
Sbjct: 552 VRRAFFSATFARDVEEWCKLNLDSIVLVSVGARNSAAETVEQELLFVGSETGKLTAMREL 611
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ PPVL+FVQS +RAKEL+ EL ++ I VIH+D +Q Q
Sbjct: 612 VKKGFAPPVLVFVQSIERAKELFHELIYEGINVDVIHADKTQQQ 655
>gi|395531966|ref|XP_003768044.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Sarcophilus
harrisii]
Length = 618
Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 109/164 (66%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL VE+LV+DE+DKLFE G + + AC++
Sbjct: 296 DILVTTPNRLIYLLKQDPPGIDLKNVEWLVVDESDKLFEDGKTGFRDQLAFIFLACTSHK 355
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + + + +G +N+A+E+++Q+L+F GSE GKLLA+R
Sbjct: 356 VRRAMFSATFAHDVEQWCKLNLDNVISISIGARNSAAETVEQELLFVGSETGKLLAMRDL 415
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ +PPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 416 IKKGFHPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 459
>gi|350418051|ref|XP_003491710.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like [Bombus
impatiens]
Length = 563
Score = 131 bits (330), Expect = 9e-29, Method: Composition-based stats.
Identities = 68/164 (41%), Positives = 107/164 (65%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRRK--KIDLSRVEYLVLDEADKLFEVGN--LLKHIDPVVKACSNPS 72
DILI+TP R+ + + I S VE+L++DE DKLFE G ++ + K+C+N +
Sbjct: 256 DILITTPKRIIYLLNQDPPAISFSNVEWLIVDEVDKLFEDGTRCFRDQLEAISKSCTNEN 315
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ +++FSAT V + R + + V VG +N A++ ++Q+L+F G+E GKL+ALR
Sbjct: 316 LHKAMFSATNTPIVTKWCRRNLKGLITVTVGHRNAATDLVEQELLFVGAERGKLVALRNI 375
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + PPVL+FVQSK+RA+EL+ EL +D + VIH+D +QTQ
Sbjct: 376 IQKGVLPPVLVFVQSKERAQELFNELIYDGVNVDVIHADRTQTQ 419
>gi|71897029|ref|NP_001025896.1| probable ATP-dependent RNA helicase DDX52 [Gallus gallus]
gi|60098635|emb|CAH65148.1| hypothetical protein RCJMB04_4d17 [Gallus gallus]
Length = 603
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 107/164 (65%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+LV+DE+DKLFE G + + AC++
Sbjct: 281 DILVTTPNRLIYLLKQDPPAIDLTSVEWLVVDESDKLFEDGKSGFRDQLASIFLACTSHV 340
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R+ FSAT VEE + + V V VG +N+A+E+++Q+L+F GSE GKL A+R+
Sbjct: 341 VRRAFFSATFAHDVEEWCKLNLDSIVLVSVGARNSAAETVEQELLFVGSETGKLTAMREL 400
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ PPVL+FVQS +RAKEL+ EL ++ I VIH+D +Q Q
Sbjct: 401 VKKGFAPPVLVFVQSIERAKELFHELIYEGINVDVIHADKTQQQ 444
>gi|380019489|ref|XP_003693637.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like, partial
[Apis florea]
Length = 512
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 106/164 (64%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DILI+TP R+ + + I + VE+L++DE DKLFE G ++ + K+C++
Sbjct: 202 DILITTPKRIIYLLNQDPPAISFNNVEWLIVDEVDKLFENGIRCFRDQLEKISKSCTSEK 261
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ +++FSAT V + R + + V VG +N A++ ++Q+L+F G+E GKL+ALR
Sbjct: 262 LHKAMFSATNTPIVTKWCRRNLKGLITVTVGHRNAATDLVEQELLFVGAERGKLVALRNI 321
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + PPVL+FVQSK+RA+EL+ EL +D I VIH+D +QTQ
Sbjct: 322 IQKGILPPVLVFVQSKERAQELFNELIYDGINVDVIHADRTQTQ 365
>gi|391340780|ref|XP_003744714.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like
[Metaseiulus occidentalis]
Length = 520
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 105/166 (63%), Gaps = 3/166 (1%)
Query: 8 STDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVV 65
S+D++K S DI+++TP RL ++ K+ L RV++L++DE+D+LFE G + +
Sbjct: 188 SSDMAK-SLDIMVTTPNRLVWLLKETKLTLGRVQHLIIDESDRLFEAGKSGFRDQLVKIY 246
Query: 66 KACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK 125
+AC + + R++FSAT +++ R + V V VG KN+A++ + QKL+F G+E GK
Sbjct: 247 EACDSSKLKRAMFSATSSKDLDKWCRLHLDSVVIVAVGAKNSATKQVDQKLLFVGTENGK 306
Query: 126 LLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSD 171
L +RQ + PPVL+FV+SK AKELY L D + VIHSD
Sbjct: 307 LFQIRQILRAGVRPPVLVFVESKAAAKELYSHLVLDGLNVDVIHSD 352
>gi|334322494|ref|XP_003340257.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 isoform 2
[Monodelphis domestica]
Length = 608
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 108/164 (65%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL VE+LV+DE+DKLFE G + + AC++
Sbjct: 295 DILVTTPNRLIYLLKQDPPGIDLKNVEWLVVDESDKLFEDGKTGFRDQLAFIFLACTSHK 354
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + V +G +N+A+E+++Q+L+F GSE GKLLA+R
Sbjct: 355 VRRAMFSATFAHDVEQWCKLNLDSVISVSIGARNSAAETVEQELLFVGSETGKLLAIRDL 414
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ +PPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 415 IKKGFHPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 458
>gi|334322496|ref|XP_001371632.2| PREDICTED: probable ATP-dependent RNA helicase DDX52 isoform 1
[Monodelphis domestica]
Length = 604
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 108/164 (65%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL VE+LV+DE+DKLFE G + + AC++
Sbjct: 291 DILVTTPNRLIYLLKQDPPGIDLKNVEWLVVDESDKLFEDGKTGFRDQLAFIFLACTSHK 350
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + V +G +N+A+E+++Q+L+F GSE GKLLA+R
Sbjct: 351 VRRAMFSATFAHDVEQWCKLNLDSVISVSIGARNSAAETVEQELLFVGSETGKLLAIRDL 410
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ +PPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 411 IKKGFHPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 454
>gi|146096246|ref|XP_001467744.1| putative ATP-dependent RNA helicase-like protein [Leishmania
infantum JPCM5]
gi|398020630|ref|XP_003863478.1| ATP-dependent RNA helicase-like protein, putative [Leishmania
donovani]
gi|134072110|emb|CAM70809.1| putative ATP-dependent RNA helicase-like protein [Leishmania
infantum JPCM5]
gi|322501711|emb|CBZ36792.1| ATP-dependent RNA helicase-like protein, putative [Leishmania
donovani]
Length = 584
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 108/162 (66%), Gaps = 2/162 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEV-GNLLKHIDPVVKACSNPSIVR 75
DI I+TP R+ + +K +DLS V+YLV DE D+L++ + L ID ++ AC+ V
Sbjct: 253 DIFIATPGRIVSLLEQKLLDLSNVQYLVFDEGDRLWDSRTDFLTVIDRILTACTRTDKVV 312
Query: 76 SLFSATLPDFVEELARSIMH-DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
SLF+ATL + VE ARS+M D VR+IV + +A+ +KQ+L+F G+E GK++A+R
Sbjct: 313 SLFTATLSEKVEAAARSVMGADPVRIIVHGRRSANTHVKQRLIFCGNELGKVVAMRNLVR 372
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E + PPVL+FVQS +R+KELY E+ + + ++H+ ++ Q
Sbjct: 373 EGITPPVLVFVQSVERSKELYEEIRAEGLHMAIMHAKMTVEQ 414
>gi|427781675|gb|JAA56289.1| Putative atp-dependent rna helicase [Rhipicephalus pulchellus]
Length = 533
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/166 (46%), Positives = 103/166 (62%), Gaps = 6/166 (3%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGN----LLKHIDPVVKACS-NP 71
DIL+ TP RL + L+RVE+L+LDE+DKLFE + + V +ACS +P
Sbjct: 231 DILVCTPNRLLCLTDSGVLTLNRVEWLILDESDKLFENAGGPRGFREQLAKVCQACSASP 290
Query: 72 SIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
+ R+LFSAT D VE R + + + VG +N A++ + QKL F GSE GKLLA+R
Sbjct: 291 LMRRALFSATATDQVEAWCRLHLDAFLSLTVGIRNAAADLVDQKLQFVGSESGKLLAIRG 350
Query: 132 SFAES-LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E L PPVL+FVQSK RAKEL+ EL +D I VIH++ +Q Q
Sbjct: 351 LVKEGKLQPPVLVFVQSKQRAKELFAELVYDGINVDVIHAERTQAQ 396
>gi|56972628|gb|AAH88581.1| ddx52-prov protein, partial [Xenopus (Silurana) tropicalis]
Length = 585
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 107/164 (65%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRRK--KIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDLS VE+L++DE+DKLFE G + + AC++
Sbjct: 293 DILVTTPNRLIYLLKQDPPGIDLSSVEWLIVDESDKLFEDGKTGFRDQLASIFVACTSHL 352
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + V V +G +N+A E+++Q L+F GSE GKLLA+R
Sbjct: 353 LKRAMFSATFAFDVEQWCKLHLDNVVSVSIGARNSAVETVEQSLLFVGSETGKLLAMRDL 412
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ PPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 413 VKKGFTPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 456
>gi|172355578|ref|NP_001116486.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Xenopus (Silurana)
tropicalis]
gi|171846831|gb|AAI61533.1| ddx52 protein [Xenopus (Silurana) tropicalis]
Length = 416
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 107/164 (65%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDLS VE+L++DE+DKLFE G + + AC++
Sbjct: 95 DILVTTPNRLIYLLKQDPPGIDLSSVEWLIVDESDKLFEDGKTGFRDQLASIFVACTSHL 154
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + V V +G +N+A E+++Q L+F GSE GKLLA+R
Sbjct: 155 LKRAMFSATFAFDVEQWCKLHLDNVVSVSIGARNSAVETVEQSLLFVGSETGKLLAMRDL 214
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ PPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 215 VKKGFTPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 258
>gi|340715568|ref|XP_003396283.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like [Bombus
terrestris]
Length = 582
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 68/164 (41%), Positives = 107/164 (65%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRRK--KIDLSRVEYLVLDEADKLFEVGN--LLKHIDPVVKACSNPS 72
DILI+TP R+ + + I S VE+L++DE DKLFE G ++ + K+C+N +
Sbjct: 256 DILITTPKRIIYLLNQDPPAISFSNVEWLIVDEVDKLFEDGTRCFRDQLETISKSCTNEN 315
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ +++FSAT V + R + + V VG +N A++ ++Q+L+F G+E GKL+ALR
Sbjct: 316 LHKAMFSATNTPIVTKWCRRNLKGLITVTVGHRNAATDLVEQELLFVGAERGKLVALRNI 375
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + PPVL+FVQSK+RA+EL+ EL +D + VIH+D +QTQ
Sbjct: 376 IQKGVLPPVLVFVQSKERAQELFNELIYDGVNVDVIHADRTQTQ 419
>gi|113197619|gb|AAI21228.1| ddx52 protein [Xenopus (Silurana) tropicalis]
Length = 595
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 107/164 (65%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRRK--KIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDLS VE+L++DE+DKLFE G + + AC++
Sbjct: 293 DILVTTPNRLIYLLKQDPPGIDLSSVEWLIVDESDKLFEDGKTGFRDQLASIFVACTSHL 352
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + V V +G +N+A E+++Q L+F GSE GKLLA+R
Sbjct: 353 LKRAMFSATFAFDVEQWCKLHLDNVVSVSIGARNSAVETVEQSLLFVGSETGKLLAMRDL 412
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ PPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 413 VKKGFTPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 456
>gi|452825003|gb|EME32002.1| ATP-dependent RNA helicase [Galdieria sulphuraria]
Length = 496
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 107/174 (61%), Gaps = 6/174 (3%)
Query: 6 VRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVV 65
R+T ++ + DI+++TP +R K+DLS + +V DEADK+FEV L+ ID ++
Sbjct: 200 TRATSSNQLTFDIIVATPYSFLNELREGKVDLSGLSDIVFDEADKMFEV-QFLEQIDEIL 258
Query: 66 KACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-----TASESIKQKLVFAG 120
C + + + LFSATLPD +E ++RS + D VRVIVGR + + ++I Q+L F G
Sbjct: 259 SYCPSALVGKHLFSATLPDAIETMSRSFIDDPVRVIVGRGSGNGSFSCIDTIDQQLKFTG 318
Query: 121 SEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+E GK AL + F + PVLIFVQ+K R ++L+ L+ I IHSD SQ
Sbjct: 319 NESGKRFALEELFINGVAAPVLIFVQNKKRVEDLFRLLSRMKISTAFIHSDCSQ 372
>gi|328789292|ref|XP_001120427.2| PREDICTED: probable ATP-dependent RNA helicase DDX52-like, partial
[Apis mellifera]
Length = 512
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 105/164 (64%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DILI+TP R+ + + I + VE+L++DE DKLFE G + + K+C++
Sbjct: 199 DILITTPKRIIYLLNQDPPAISFNNVEWLIVDEVDKLFEDGIRCFRDQFEKISKSCTSEK 258
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ +++FSAT V + R + + V VG +N A++ ++Q+L+F G+E GKL+ALR
Sbjct: 259 LHKAMFSATNTPIVTKWCRRNLKGLITVTVGHRNAATDLVEQELLFVGAERGKLVALRNI 318
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + PPVL+FVQSK+RA+EL+ EL +D I VIH+D +QTQ
Sbjct: 319 IQKGILPPVLVFVQSKERAQELFNELIYDGINVDVIHADRTQTQ 362
>gi|67677953|gb|AAH97566.1| LOC446276 protein, partial [Xenopus laevis]
Length = 585
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 107/164 (65%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRRK--KIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDLS VE+L++DE+DKLFE G + + AC++
Sbjct: 293 DILVTTPNRLIYLLKQDPPGIDLSSVEWLIVDESDKLFEDGKTGFRDQLASIFVACTSHL 352
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + V V VG +N+A E+++Q L+F GSE GKLLA+R
Sbjct: 353 LKRAMFSATFAFDVEQWCKLHLDNVVSVSVGARNSAVETVEQSLLFVGSETGKLLAMRDL 412
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ PPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 413 VKKGFAPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 456
>gi|51261421|gb|AAH79986.1| LOC446276 protein, partial [Xenopus laevis]
Length = 587
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 107/164 (65%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRRK--KIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDLS VE+L++DE+DKLFE G + + AC++
Sbjct: 293 DILVTTPNRLIYLLKQDPPGIDLSSVEWLIVDESDKLFEDGKTGFRDQLASIFVACTSHL 352
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + V V VG +N+A E+++Q L+F GSE GKLLA+R
Sbjct: 353 LKRAMFSATFAFDVEQWCKLHLDNVVSVSVGARNSAVETVEQSLLFVGSETGKLLAMRDL 412
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ PPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 413 VKKGFAPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 456
>gi|401426831|ref|XP_003877899.1| ATP-dependent RNA helicase-like protein,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
gi|322494146|emb|CBZ29443.1| ATP-dependent RNA helicase-like protein,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
Length = 584
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 107/162 (66%), Gaps = 2/162 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEV-GNLLKHIDPVVKACSNPSIVR 75
DI I+TP R+ + +K +DLS V+YLV DE D+L++ + L ID ++ AC+ V
Sbjct: 253 DIFIATPGRIVSLLEQKLLDLSNVQYLVFDEGDRLWDSRTDFLAVIDRILTACTRTDKVV 312
Query: 76 SLFSATLPDFVEELARSIMH-DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
SLF+ATL + VE ARS+M D VR+IV + + + +KQ+LVF G+E GK++A+R
Sbjct: 313 SLFTATLSEKVEAAARSVMGADPVRIIVHGRRSVNTHVKQRLVFCGNELGKVVAMRNLVR 372
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E + PPVL+FVQS +R+KELY E+ + + ++H+ ++ Q
Sbjct: 373 EGITPPVLVFVQSVERSKELYEEIRAEGLHMAIMHAKMTVEQ 414
>gi|148222272|ref|NP_001086456.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Xenopus laevis]
gi|117167895|gb|AAI24841.1| LOC446276 protein [Xenopus laevis]
Length = 614
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 107/164 (65%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRRK--KIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDLS VE+L++DE+DKLFE G + + AC++
Sbjct: 293 DILVTTPNRLIYLLKQDPPGIDLSSVEWLIVDESDKLFEDGKTGFRDQLASIFVACTSHL 352
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + V V VG +N+A E+++Q L+F GSE GKLLA+R
Sbjct: 353 LKRAMFSATFAFDVEQWCKLHLDNVVSVSVGARNSAVETVEQSLLFVGSETGKLLAMRDL 412
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ PPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 413 VKKGFAPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 456
>gi|342186417|emb|CCC95903.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 552
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 105/162 (64%), Gaps = 2/162 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFE-VGNLLKHIDPVVKACSNPSIVR 75
DI I+TP R+ + + +DL V+YLV DE D+L++ + LK +D V+ AC V
Sbjct: 242 DIFITTPGRVFSMLEKGLVDLGNVQYLVFDEGDRLWDSTTDNLKIVDAVLTACVCSEKVV 301
Query: 76 SLFSATLPDFVEELARSIMH-DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
+LF+ATL +E +ARS+M D VR+IV + AS+ ++Q+LVF G+E GK++A+R
Sbjct: 302 ALFTATLSKKIEAMARSVMSPDPVRIIVAGRANASKDVRQELVFCGNELGKIVAMRNILR 361
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E + PPVLIFVQS +R+KELY E+ + V++S +S +
Sbjct: 362 EGITPPVLIFVQSIERSKELYEEIHCQGLHIAVMNSRMSHEE 403
>gi|432897373|ref|XP_004076440.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like [Oryzias
latipes]
Length = 657
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 106/164 (64%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL+STP RL +++ IDLS VE+L++DE+DKLFE G + + + +C
Sbjct: 298 DILVSTPNRLVFLLKQDPPAIDLSCVEWLIVDESDKLFEDGKRGFREQLATIFLSCCGAK 357
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R+ FSAT VE+ R + + V V +G +NTA ++++Q+L+F GSE GKL+A+R
Sbjct: 358 VRRAFFSATCTTEVEQWCRLNLDNLVSVNIGHRNTAVDTVEQELLFVGSESGKLVAMRDI 417
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ PP+L+FVQS +RA+EL+ EL ++ I VIH++ +Q Q
Sbjct: 418 VKKGFLPPMLVFVQSIERARELFHELVYEGINVDVIHAERTQQQ 461
>gi|340059592|emb|CCC53981.1| putative RNA helicase, fragment, partial [Trypanosoma vivax Y486]
Length = 370
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 106/162 (65%), Gaps = 2/162 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFE-VGNLLKHIDPVVKACSNPSIVR 75
DI ++TP R+ + +K + L V+YLV DEAD+L++ + L+ +D V+ AC+ V
Sbjct: 53 DIFVTTPGRVATMLEKKLVSLDMVQYLVFDEADRLWDSTTDNLQVVDAVLTACTLKEKVV 112
Query: 76 SLFSATLPDFVEELARSIMH-DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
+LF+ATL +E +ARS+M D VR+IV + A+ ++KQ+LVF G+E GK++A+R
Sbjct: 113 ALFTATLSAKIESIARSVMSPDVVRIIVAGRTMANRNVKQELVFCGNELGKIVAMRNLVR 172
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E + PPVL+FVQS +R KELY E+ + V++S ++ +
Sbjct: 173 EGITPPVLVFVQSIERTKELYEEIHCQGLHIAVMNSKMTHEE 214
>gi|294946828|ref|XP_002785180.1| ATP-dependent RNA helicase ROK1, putative [Perkinsus marinus ATCC
50983]
gi|239898755|gb|EER16976.1| ATP-dependent RNA helicase ROK1, putative [Perkinsus marinus ATCC
50983]
Length = 515
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 105/174 (60%), Gaps = 15/174 (8%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP----- 71
DI + TPL L A+R K+DL+ + +V DE DKL ++G ID ++K +
Sbjct: 275 DIGVQTPLGLVQALREGKVDLNNTQVIVFDEGDKLLDLG-FQDQIDEIIKYANEEDERRR 333
Query: 72 -------SIVRSLFSATLPDFVEELARSIMHDAV-RVIVGRKNTASESIKQKLVFAGSEE 123
+I SLFSAT+PD V L S+M RV VG++ +A++ ++Q+L+F G+EE
Sbjct: 334 TAGSALGTIQLSLFSATMPDNVVHLMMSVMDPPPNRVWVGQQGSAAKDVQQRLLFCGNEE 393
Query: 124 GKLLALRQSFAES-LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
GKL+ALR+ A + PP L FVQSK RA+EL EL FD + IHSD+S+ Q
Sbjct: 394 GKLVALRRMIANGEVKPPCLAFVQSKARAQELTKELMFDGVFVACIHSDMSRKQ 447
>gi|392573096|gb|EIW66238.1| hypothetical protein TREMEDRAFT_41061 [Tremella mesenterica DSM
1558]
Length = 546
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 113/179 (63%), Gaps = 8/179 (4%)
Query: 5 LVRSTDLSK-----FSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLK 59
L ++T+++K DIL++TP RL I +++ L+ +++LDEAD+L + L
Sbjct: 219 LSKATEMAKTRRAGLGIDILVATPERLHHLINEQRVSLAETSHIILDEADRLLSP-DFLP 277
Query: 60 HIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDA-VRVIVGRKNTASESIKQKLVF 118
++P+V+AC++P + + L SAT+P E LAR+ + + VR++VG K++A ++ Q LVF
Sbjct: 278 QVEPIVEACTHPKVQKCLLSATIPAGAEALARTWLREGGVRIVVGIKDSAVTTVDQSLVF 337
Query: 119 AGSEEGKLLALRQSFAESLNP-PVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+E GKL+ LRQ + P P LIFVQS +RA+EL LA + ++ ++H S+T+
Sbjct: 338 TATESGKLMTLRQLISSGDLPYPSLIFVQSIERAEELCKTLALEGVKVDMVHGGRSRTK 396
>gi|3646126|emb|CAA09374.1| ATP-dependent RNA helicase [Homo sapiens]
Length = 420
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 105/164 (64%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+LV+DE+DKLFE G + + AC++
Sbjct: 108 DILVTTPNRLIYLLKQDPPGIDLASVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHK 167
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSA L + A S + G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 168 VRRAMFSAILHMMLNSGANSTWTMSSVCPFGARNSAVETVEQELLFVGSETGKLLAVREL 227
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ NPPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 228 VKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 271
>gi|261335430|emb|CBH18424.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma brucei
gambiense DAL972]
Length = 556
Score = 125 bits (313), Expect = 9e-27, Method: Composition-based stats.
Identities = 67/162 (41%), Positives = 109/162 (67%), Gaps = 2/162 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG-NLLKHIDPVVKACSNPSIVR 75
DI I+TP R+ + RK +DLS ++YLV DE D+L++ + L+ +D V+ AC+ V
Sbjct: 243 DIFITTPGRVSTLLERKLVDLSNIQYLVFDEGDRLWDSSTDNLRVMDIVLTACTYKEKVV 302
Query: 76 SLFSATLPDFVEELARSIMH-DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
+LF+ATL + +E ARS+M D VR+IV + A++++KQ+LVF G+E GK++A+R
Sbjct: 303 ALFTATLSEKIEAAARSVMGPDPVRIIVSGRAKANKNVKQELVFCGNELGKVVAIRNIVR 362
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E + PPVLIFVQS +R KEL+ E+ +R ++++ ++ +
Sbjct: 363 EGVTPPVLIFVQSIERTKELHEEIQCQGLRIAIMNAKMTHEE 404
>gi|74025742|ref|XP_829437.1| ATP-dependent DEAD/H RNA helicase [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|70834823|gb|EAN80325.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 556
Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 67/162 (41%), Positives = 109/162 (67%), Gaps = 2/162 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG-NLLKHIDPVVKACSNPSIVR 75
DI I+TP R+ + RK +DLS ++YLV DE D+L++ + L+ +D V+ AC+ V
Sbjct: 243 DIFITTPGRVSTLLERKLVDLSNIQYLVFDEGDRLWDSSTDNLRVMDIVLTACTYKEKVV 302
Query: 76 SLFSATLPDFVEELARSIMH-DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
+LF+ATL + +E ARS+M D VR+IV + A++++KQ+LVF G+E GK++A+R
Sbjct: 303 ALFTATLSEKIEAAARSVMGPDPVRIIVSGRAKANKNVKQELVFCGNELGKVVAIRNIVR 362
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E + PPVLIFVQS +R KEL+ E+ +R ++++ ++ +
Sbjct: 363 EGVTPPVLIFVQSIERTKELHEEIQCQGLRIAIMNAKMTHEE 404
>gi|340059591|emb|CCC53980.1| putative ATP-dependent DEAD/H RNA helicase, fragment, partial
[Trypanosoma vivax Y486]
Length = 504
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 106/162 (65%), Gaps = 2/162 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFE-VGNLLKHIDPVVKACSNPSIVR 75
DI ++TP R+ + + +K + L V+YLV DE D+L++ + L+ +D V+ AC+ V
Sbjct: 238 DIFVTTPGRVAVMLEKKLVSLDMVQYLVFDEGDRLWDSTTDNLQVVDVVLTACTLKEKVV 297
Query: 76 SLFSATLPDFVEELARSIMH-DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
+LF+ATL +E +ARS+M D VR+IV + A+ ++KQ+LVF G+E GK++A+R
Sbjct: 298 ALFTATLSAKIESIARSVMSPDVVRIIVAGRTMANRNVKQELVFCGNELGKIVAMRNLVR 357
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E + PPVL+FVQS +R KELY E+ + V++S ++ +
Sbjct: 358 EGVTPPVLVFVQSIERTKELYEEIHCQGLHIAVMNSKMTHEE 399
>gi|294933866|ref|XP_002780884.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239891011|gb|EER12679.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 546
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 112/188 (59%), Gaps = 17/188 (9%)
Query: 3 KELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHID 62
K L ++T++ + DI + TPL L A+R K+D + + +V DE DKL ++G ID
Sbjct: 280 KLLDKNTNVKRL--DIGVQTPLGLVQALREGKVDFNNTQVIVFDEGDKLLDLG-FQDQID 336
Query: 63 PVVKACSNP------------SIVRSLFSATLPDFVEELARSIMHDAV-RVIVGRKNTAS 109
++K + +I SLFSAT+PD V L S+M RV VG++ +A+
Sbjct: 337 EIIKYANEEDERRRTAGSALGTIQLSLFSATMPDNVVHLMMSVMDPPPNRVWVGQQGSAA 396
Query: 110 ESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSKDRAKELYGELAFDDIRAGVI 168
+ ++Q+L+F G+EEGKL+ALR+ A + PP L FVQSK RA+EL EL FD + I
Sbjct: 397 KDVQQRLLFCGNEEGKLVALRRMIANGEVKPPCLAFVQSKARAQELTKELMFDGVFVACI 456
Query: 169 HSDLSQTQ 176
HSD+S+ Q
Sbjct: 457 HSDMSRKQ 464
>gi|407850251|gb|EKG04705.1| RNA helicase, putative,ATP-dependent RNA helicase, putative
[Trypanosoma cruzi]
Length = 553
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 105/162 (64%), Gaps = 2/162 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFE-VGNLLKHIDPVVKACSNPSIVR 75
DI I+TP R+ I +K IDL +YLV DE D+L++ + L+ +D ++ AC+ V
Sbjct: 240 DIFITTPRRVFTMIEKKLIDLGNTQYLVFDEVDRLWDSATDNLQVVDSILTACTFEEKVV 299
Query: 76 SLFSATLPDFVEELARSIMH-DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
+LF+ATL +E +AR++M D +R+IV + +A++ I Q+LVF G+E GK++ +R
Sbjct: 300 ALFTATLSSKIEGIARTVMSPDPIRIIVSGRVSANKKISQELVFCGNELGKIVEIRNLLR 359
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E ++PPVLIFVQS +R KELY E+ + V++S +S +
Sbjct: 360 EGISPPVLIFVQSIERTKELYDEIRCQGLNIAVMNSKMSHEE 401
>gi|134113761|ref|XP_774465.1| hypothetical protein CNBG1110 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819324|sp|P0CR05.1|ROK1_CRYNB RecName: Full=ATP-dependent RNA helicase ROK1
gi|50257103|gb|EAL19818.1| hypothetical protein CNBG1110 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 620
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 103/171 (60%), Gaps = 3/171 (1%)
Query: 8 STDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKA 67
S + D+L++TP RL I ++I L+R +Y++LDE+D+L + L ++P++ A
Sbjct: 291 SGNPEGLGIDVLVATPERLHHLIDSRRISLARTKYVILDESDRLLS-SDFLPQVEPILSA 349
Query: 68 CSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGR-KNTASESIKQKLVFAGSEEGKL 126
CSNP++ + SAT+P E LA+ + D +V K++A ++ Q L++ GSE GKL
Sbjct: 350 CSNPAVQKCFLSATMPAGAESLAKKWLKDGGVRVVVGVKDSAVTTVDQSLLYTGSESGKL 409
Query: 127 LALRQSFAESLNP-PVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
LALR + P P LIFVQS DRA+ELY L D I+ +H ++T+
Sbjct: 410 LALRNLISSGQLPYPSLIFVQSIDRAEELYKTLVLDGIKVDAVHGGKAKTK 460
>gi|154342955|ref|XP_001567423.1| putative RNA helicase [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134064755|emb|CAM42860.1| putative RNA helicase [Leishmania braziliensis MHOM/BR/75/M2904]
Length = 584
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 108/162 (66%), Gaps = 2/162 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEV-GNLLKHIDPVVKACSNPSIVR 75
DI I+TP R+ L + +K +DLS V+YLV DE D+L++ + L ID ++ AC+ V
Sbjct: 253 DIFIATPGRIALLLEQKLLDLSNVQYLVFDEGDRLWDSRTDFLIVIDKILTACTRTDKVV 312
Query: 76 SLFSATLPDFVEELARSIMH-DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
SLF+ATL + VE ARS+M D VR+IV + AS ++Q+LVF G+E GK++A+R
Sbjct: 313 SLFTATLSEKVEAAARSVMGTDPVRIIVHGRRFASTHVRQRLVFCGNELGKVVAMRNLVR 372
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E + PPVL+FVQS +R+KELY E+ + + ++H+ ++ Q
Sbjct: 373 EGITPPVLVFVQSVERSKELYEEIRAEGLHMAIMHAKMTVEQ 414
>gi|407410868|gb|EKF33151.1| RNA helicase, putative,ATP-dependent RNA helicase, putative
[Trypanosoma cruzi marinkellei]
Length = 546
Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats.
Identities = 66/162 (40%), Positives = 105/162 (64%), Gaps = 2/162 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG-NLLKHIDPVVKACSNPSIVR 75
DI I+TP R+ I +K IDL +YLV DE D+L++ + L+ +D ++ AC+ V
Sbjct: 240 DIFITTPRRVFTMIEKKLIDLGNTQYLVFDEVDRLWDSATDNLQVVDSILTACTFEEKVV 299
Query: 76 SLFSATLPDFVEELARSIMH-DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
+LF+ATL +E +AR++M D +R+IV + +A++ I Q+LVF G+E GK++ +R
Sbjct: 300 ALFTATLSSKIEGVARTVMSPDPIRIIVSGRVSANKKISQELVFCGNELGKIVEIRNLLR 359
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E +NPPVLIFVQS +R KELY E+ + V++S ++ +
Sbjct: 360 EGINPPVLIFVQSIERTKELYDEIRCQGLNIAVMNSKMTHEE 401
>gi|405121664|gb|AFR96432.1| ATP-dependent RNA helicase ROK1 [Cryptococcus neoformans var.
grubii H99]
Length = 618
Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 103/171 (60%), Gaps = 3/171 (1%)
Query: 8 STDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKA 67
S + D+L++TP RL I ++I L+R +Y++LDE+D+L + L ++P++ A
Sbjct: 289 SGNPEGLGIDVLVATPERLHHLIDSRRISLARTKYVILDESDRLLS-SDFLPQVEPILSA 347
Query: 68 CSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGR-KNTASESIKQKLVFAGSEEGKL 126
CSNP++ + SAT+P E LA+ + D +V K++A ++ Q L++ GSE GKL
Sbjct: 348 CSNPAVQKCFLSATMPAGAEALAKKWLKDGGVRVVVGVKDSAVTTVDQSLLYTGSESGKL 407
Query: 127 LALRQSFAESLNP-PVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
LALR + P P LIFVQS DRA+ELY L D I+ +H ++T+
Sbjct: 408 LALRNLISSGQLPYPSLIFVQSIDRAEELYKTLVLDGIKVDAVHGGKAKTK 458
>gi|58269832|ref|XP_572072.1| ATP dependent RNA helicase [Cryptococcus neoformans var. neoformans
JEC21]
gi|338819323|sp|P0CR04.1|ROK1_CRYNJ RecName: Full=ATP-dependent RNA helicase ROK1
gi|57228308|gb|AAW44765.1| ATP dependent RNA helicase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 620
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 103/171 (60%), Gaps = 3/171 (1%)
Query: 8 STDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKA 67
S + D+L++TP RL I ++I L+R +Y++LDE+D+L + L ++P++ A
Sbjct: 291 SGNPEGLGIDMLVATPERLHHLIDSRRISLARTKYVILDESDRLLS-SDFLPQVEPILSA 349
Query: 68 CSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGR-KNTASESIKQKLVFAGSEEGKL 126
CSNP++ + SAT+P E LA+ + D +V K++A ++ Q L++ GSE GKL
Sbjct: 350 CSNPAVQKCFLSATMPAGAESLAKKWLKDGGVRVVVGVKDSAVTTVDQSLLYTGSESGKL 409
Query: 127 LALRQSFAESLNP-PVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
LALR + P P LIFVQS DRA+ELY L D I+ +H ++T+
Sbjct: 410 LALRNLISSGQLPYPSLIFVQSIDRAEELYKTLVLDGIKVDAVHGGKAKTK 460
>gi|71420983|ref|XP_811671.1| RNA helicase [Trypanosoma cruzi strain CL Brener]
gi|70876358|gb|EAN89820.1| RNA helicase, putative [Trypanosoma cruzi]
Length = 553
Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 65/162 (40%), Positives = 105/162 (64%), Gaps = 2/162 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG-NLLKHIDPVVKACSNPSIVR 75
DI I+TP R+ I +K IDL +YLV DE D+L++ + L+ +D ++ AC+ V
Sbjct: 240 DIFITTPRRVFTMIEKKLIDLGNTQYLVFDEVDRLWDSATDNLQVVDSILTACTFEEKVV 299
Query: 76 SLFSATLPDFVEELARSIMH-DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
+LF+ATL +E +AR++M D +R+IV + +A++ I Q+LVF G+E GK++ +R
Sbjct: 300 ALFTATLSSKIEGIARTVMSPDPIRIIVSGRVSANKKISQELVFCGNELGKIVEIRNLLR 359
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E ++PPVLIFVQS +R KELY E+ + V++S ++ +
Sbjct: 360 EGISPPVLIFVQSIERTKELYDEIRCQGLNIAVMNSKMNHEE 401
>gi|324507437|gb|ADY43153.1| ATP-dependent RNA helicase DDX52 [Ascaris suum]
Length = 593
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 101/170 (59%), Gaps = 9/170 (5%)
Query: 16 CDILISTPLRLRLAIRRKKID--LSRVEYLVLDEADKLFEVGN-----LLKHIDPVVKAC 68
DI++STP R+ I D + +L++DE+D+LFE + V +AC
Sbjct: 247 ADIIVSTPKRMEFFIENNPSDSTFKWLRWLIVDESDRLFETTEGDSRCFRTQLAKVYQAC 306
Query: 69 SNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLA 128
+ R FSAT VEE ++ +H+ V VG +N+A +S++Q+LVFAGSE GK++A
Sbjct: 307 NGKYTHRGFFSATFSYEVEEWCKTNLHNVAMVCVGARNSAVDSVEQQLVFAGSEHGKVVA 366
Query: 129 LRQSFAESLNPPVLIFVQSKDRAKELYGEL-AFD-DIRAGVIHSDLSQTQ 176
+R F + PP LIFVQSKDRA++L+ E+ AF+ I +I S+ S+ +
Sbjct: 367 IRSLFQQGFEPPALIFVQSKDRARQLFSEMSAFEPPIPVALISSERSEKE 416
>gi|223997020|ref|XP_002288183.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975291|gb|EED93619.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 409
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 103/177 (58%), Gaps = 17/177 (9%)
Query: 12 SKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKL-FEVGN-----LLKHIDPVV 65
K D LISTPLRL I R + L+ V +VLDEAD+ + G+ L+ ID ++
Sbjct: 137 GKSGLDCLISTPLRLVECIERG-MRLNGVRLIVLDEADRQNAQSGSSQSRTFLQQIDSIL 195
Query: 66 KACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVG---------RKNTASESIKQKL 116
+ + R+LFSATL V L+ SI+ + + G ASE I+Q+L
Sbjct: 196 SHLPS-TATRALFSATLGPSVRHLSESILRSPIDITTGIHAGIGGNSAAGGASEHIQQEL 254
Query: 117 VFAGSEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLS 173
F G EEGKLLA+RQ AE + PPVLIF+QSK+RA+ L+GEL +D IR VIH+ S
Sbjct: 255 KFVGREEGKLLAIRQLVAEGITPPVLIFLQSKERAQALFGELLYDGIRVDVIHAGRS 311
>gi|390604084|gb|EIN13475.1| P-loop containing nucleoside triphosphate hydrolase protein
[Punctularia strigosozonata HHB-11173 SS5]
Length = 592
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 96/163 (58%), Gaps = 2/163 (1%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
+ DI+ISTPLRL A+ I LS V +LVLDEAD+L + L + ++ AC++PS
Sbjct: 260 NVDIIISTPLRLVSALGSNSISLSNVRHLVLDEADRLLDA-EFLPQLQDIIAACTHPSCQ 318
Query: 75 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
+++FSATLP VE++A +M D VRV+VG K+T I+Q LV+ + KL L
Sbjct: 319 KAVFSATLPAGVEKIAMGMMKDPVRVVVGLKDTPLPHIQQSLVYVADDASKLPTLVAHLN 378
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDI-RAGVIHSDLSQTQ 176
PPV+IF ++ RA L L I R G +H+ +++ Q
Sbjct: 379 RPYTPPVIIFTSTQPRASSLAENLVLYSIPRVGCLHAGMTKKQ 421
>gi|409051237|gb|EKM60713.1| hypothetical protein PHACADRAFT_110354 [Phanerochaete carnosa
HHB-10118-sp]
Length = 576
Score = 119 bits (297), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 99/161 (61%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DI+ISTPLR+ A++ + LS V +LVLDEAD++ + L+ I ++ ACS P + ++
Sbjct: 253 DIVISTPLRMVAALQSGNLKLSNVRHLVLDEADRMLDP-EFLEQIREIIAACSYPRVQKA 311
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSATLP E +A +M + +RV+VG K+T I Q L + + KL L Q A+
Sbjct: 312 VFSATLPANAERIAMDMMTNPIRVVVGLKDTPLPLIAQSLTYVHDDSSKLPTLLQYLAQP 371
Query: 137 LNPPVLIFVQSKDRAKELYGELAFDDIR-AGVIHSDLSQTQ 176
NPPVL+FV ++ RA L EL +DI+ +H+ +S+ +
Sbjct: 372 YNPPVLVFVSTQPRASSLAEELVLNDIQNVDCLHAGMSKKE 412
>gi|321260827|ref|XP_003195133.1| ATP dependent RNA helicase [Cryptococcus gattii WM276]
gi|317461606|gb|ADV23346.1| ATP dependent RNA helicase, putative [Cryptococcus gattii WM276]
Length = 617
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 103/171 (60%), Gaps = 3/171 (1%)
Query: 8 STDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKA 67
S + D+L++TP RL I ++I L++ +Y++LDE+D+L + L ++P++ A
Sbjct: 288 SGNPEGLGIDVLVATPERLHHLIDSRRISLAQTKYVILDESDRLLS-SDFLPQVEPILSA 346
Query: 68 CSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGR-KNTASESIKQKLVFAGSEEGKL 126
C+NP++ + SAT+P E LA+ + D +V K++A ++ Q L++ GSE GKL
Sbjct: 347 CTNPTVQKCFLSATMPAGAEALAKKWLKDGGVRVVVGVKDSAVTTVDQSLLYTGSESGKL 406
Query: 127 LALRQSFAESLNP-PVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
LALR + P P LIFVQS +RA+ELY L D I+ +H ++T+
Sbjct: 407 LALRNLISSGQLPYPSLIFVQSIERAEELYKTLVLDGIKVDAVHGGKAKTK 457
>gi|392597064|gb|EIW86386.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 542
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 98/161 (60%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DI+ISTPLRL AI+ + L V +LVLDEAD++ + L + ++ AC++P++ ++
Sbjct: 253 DIIISTPLRLVAAIQEGNVTLKNVRHLVLDEADRMLDA-EFLSQVQEIIAACTHPNLQKA 311
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSATLP E+LA +++ + +R++VG K+T I Q L + + KL +L FA+
Sbjct: 312 VFSATLPAGAEKLAMAMLRNPIRIVVGLKDTPLPLIAQSLTYVADDASKLPSLLTYFAQP 371
Query: 137 LNPPVLIFVQSKDRAKELYGELAFDDI-RAGVIHSDLSQTQ 176
NPPVL+F ++ RA L EL I +H+ +++ Q
Sbjct: 372 YNPPVLVFTSTQPRASSLASELIMSGIPNVDCLHAGMTRKQ 412
>gi|403414605|emb|CCM01305.1| predicted protein [Fibroporia radiculosa]
Length = 874
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 98/161 (60%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DI+ISTPLR+ A++ ++L V +LVLDEAD++ + L + ++ ACS+P + ++
Sbjct: 552 DIIISTPLRMVSALQAGSLELRNVRHLVLDEADRMLDA-EFLTQVQEIITACSHPQVQKA 610
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSATLP E++A ++ D +R++VG K+T I Q L + + KL L Q ++
Sbjct: 611 VFSATLPAGAEKIAMDMLRDPIRIVVGLKDTPLPLIAQSLTYVADDPSKLPTLLQYLSQP 670
Query: 137 LNPPVLIFVQSKDRAKELYGELAFDDI-RAGVIHSDLSQTQ 176
NPPVLIFV S+ RA L EL + + +H+ +S+ +
Sbjct: 671 YNPPVLIFVSSQPRATSLAEELVLNGVLNVDCLHAGMSKKE 711
>gi|393247738|gb|EJD55245.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 565
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 97/161 (60%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DI+ISTPLRL ++ + ++L V +L+LDEAD+L + L + + ACS+ + +
Sbjct: 249 DIVISTPLRLVACLKSETLELDNVRHLILDEADRLLDT-EFLGQVQEIYSACSHKELQTA 307
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSATLP VEEL+ +M + +R++VG K+T I Q LV+ SE KLL L Q +
Sbjct: 308 VFSATLPAAVEELSMQMMRNPIRIVVGLKDTPLPLIAQSLVYVSSESSKLLTLLQHLGQP 367
Query: 137 LNPPVLIFVQSKDRAKELYGELAFDDI-RAGVIHSDLSQTQ 176
PP+LIFV ++ RA L EL D+ +H+ +S+ +
Sbjct: 368 YTPPLLIFVGTQPRAGSLAEELVLHDVPNVDCLHAGMSKKE 408
>gi|401883440|gb|EJT47648.1| hypothetical protein A1Q1_03425 [Trichosporon asahii var. asahii
CBS 2479]
Length = 576
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/167 (42%), Positives = 98/167 (58%), Gaps = 8/167 (4%)
Query: 12 SKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP 71
D LI+TP RL + + YLVLDE D+L + + P+V AC+
Sbjct: 249 GNLGIDFLIATPERLHHLLDEGLV----TRYLVLDECDRLLSA-DFKPQVVPIVDACTG- 302
Query: 72 SIVRSLFSATLPDFVEELARSIMHDA-VRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
+ + L SAT+P EELAR+ + DA VRV+VG K++A ++ Q L++ GSE+GKLLALR
Sbjct: 303 DVQKCLLSATMPAGAEELARAWLKDAGVRVVVGLKDSAVTTVDQSLLYTGSEQGKLLALR 362
Query: 131 QSFAESLNP-PVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
AE P P LIFVQS +RA EL +L D +RA +H S+T+
Sbjct: 363 NLIAEGGLPYPSLIFVQSVERADELARQLVLDGVRAEAVHGGKSKTR 409
>gi|392571875|gb|EIW65047.1| P-loop containing nucleoside triphosphate hydrolase protein
[Trametes versicolor FP-101664 SS1]
Length = 576
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 100/161 (62%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
D++ISTPLRL +++ ++L V ++VLDEAD++ + L+ ++ V+ AC+ P + ++
Sbjct: 250 DLVISTPLRLVASLKAGHLELGNVRHIVLDEADRMLDT-EFLEQVEEVIAACTYPDVQKA 308
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSATLP E++A S++ D +RV+VG K+T I Q L + ++ KL L Q ++
Sbjct: 309 VFSATLPANAEKVALSMLRDPIRVVVGLKDTPLPLIAQSLTYVADDQSKLPTLLQYLSQP 368
Query: 137 LNPPVLIFVQSKDRAKELYGELAFDDI-RAGVIHSDLSQTQ 176
NPPVLIFV S+ RA L EL I +H+ LS+ +
Sbjct: 369 YNPPVLIFVSSQPRAASLAEELIISGIPNVDCLHAGLSKKE 409
>gi|449550561|gb|EMD41525.1| hypothetical protein CERSUDRAFT_146544 [Ceriporiopsis subvermispora
B]
Length = 575
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/147 (41%), Positives = 92/147 (62%), Gaps = 1/147 (0%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
D++ISTPLRL A++ I+L V ++VLDEAD++ + L + VV AC+ P++ ++
Sbjct: 253 DLVISTPLRLVAALQAGHIELDNVRHIVLDEADRMLD-SEFLSQVQEVVAACTYPNVQKA 311
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSATLP E++A S++ D +RV+VG K+T I Q L + + KL L Q ++
Sbjct: 312 VFSATLPAGAEKIAMSMLQDPIRVVVGLKDTPLPLIAQSLTYVADDPSKLPTLLQYLSQP 371
Query: 137 LNPPVLIFVQSKDRAKELYGELAFDDI 163
NPPVLIFV ++ RA L EL + I
Sbjct: 372 YNPPVLIFVSTQPRAASLAEELVINSI 398
>gi|395326045|gb|EJF58459.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dichomitus squalens LYAD-421 SS1]
Length = 579
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 96/155 (61%), Gaps = 5/155 (3%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DI+ISTPLRL +++ ++L V +L LDEAD++ + L+ + V+ AC++P I ++
Sbjct: 256 DIIISTPLRLVASLQAGNLELDNVRHLFLDEADRMLDT-EFLEQVQEVIAACTHPEIQKA 314
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSATLP E++A S++ D +RV+VG K+T I Q L + ++ KL L Q ++
Sbjct: 315 VFSATLPANAEKIAMSMLRDPIRVVVGLKDTPLPLIAQSLTYVADDQSKLPTLLQYLSQP 374
Query: 137 LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSD 171
NPPVLIFV S+ RA L EL AGV + D
Sbjct: 375 YNPPVLIFVSSQPRATSLAEELVI----AGVPNVD 405
>gi|426201672|gb|EKV51595.1| hypothetical protein AGABI2DRAFT_189828 [Agaricus bisporus var.
bisporus H97]
Length = 566
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 95/162 (58%), Gaps = 2/162 (1%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
D++ISTPLRL ++R IDL + +LVLDEAD+LF+ ++ C++P + +
Sbjct: 241 VDVIISTPLRLVASLRAGIIDLQNIRHLVLDEADRLFD-KEFFSQTQEIITYCNHPGVQK 299
Query: 76 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 135
++FSATLP E++A ++ D +R++VG K+T I Q L + ++ KL +L FA
Sbjct: 300 AVFSATLPAGAEKIAMEMLQDPIRIVVGLKDTPLPLIHQSLTYVADDQSKLPSLLGHFAR 359
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDI-RAGVIHSDLSQTQ 176
NPP+LIF ++ RA L EL I +H+ ++Q +
Sbjct: 360 PYNPPILIFTSTQIRASSLAEELVMSGIPNVDCLHAGMTQKE 401
>gi|409083276|gb|EKM83633.1| hypothetical protein AGABI1DRAFT_110276 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 566
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 95/162 (58%), Gaps = 2/162 (1%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
D++ISTPLRL ++R IDL + +LVLDEAD+LF+ ++ C++P + +
Sbjct: 241 VDVIISTPLRLVASLRAGIIDLQNIRHLVLDEADRLFD-KEFFSQTQEIITYCNHPGVQK 299
Query: 76 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 135
++FSATLP E++A ++ D +R++VG K+T I Q L + ++ KL +L FA
Sbjct: 300 AVFSATLPAGAEKIAMEMLQDPIRIVVGLKDTPLPLIHQSLTYVADDQSKLPSLLGHFAR 359
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDI-RAGVIHSDLSQTQ 176
NPP+LIF ++ RA L EL I +H+ ++Q +
Sbjct: 360 PYNPPILIFTSTQIRASSLAEELVMSGIPNVDCLHAGMTQKE 401
>gi|353237317|emb|CCA69293.1| probable ROK1-ATP-dependent RNA helicase [Piriformospora indica DSM
11827]
Length = 561
Score = 115 bits (287), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 97/163 (59%), Gaps = 4/163 (2%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DI+ISTP+RL +I+ I L RV+ L+LDEAD+L + ++ +V CSNP+ ++
Sbjct: 246 DIIISTPMRLVASIQAGDIQLDRVQVLILDEADRLLDP-EFASQVEEIVGCCSNPACQKA 304
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSATLP E+ ++M+D +RV+VG K+T +IKQ LV+ E KL L Q
Sbjct: 305 VFSATLPAKAEKTVLNMMNDPIRVVVGLKDTPLPNIKQSLVYVAQPESKLPTLIQYLTSP 364
Query: 137 LN--PPVLIFVQSKDRAKELYGELAFDDI-RAGVIHSDLSQTQ 176
L PPV++F ++ RA L EL + A +H+ L++ Q
Sbjct: 365 LGYKPPVIVFTSTQARATSLLSELLLAGVMNAEALHAGLTKHQ 407
>gi|389742318|gb|EIM83505.1| P-loop containing nucleoside triphosphate hydrolase protein
[Stereum hirsutum FP-91666 SS1]
Length = 584
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 99/162 (61%), Gaps = 2/162 (1%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
D++ISTPLRL +++ ++L+ V +LVLDEAD++ + L + V+ AC++P I +
Sbjct: 266 VDVIISTPLRLVTSLQSGDLELNNVRHLVLDEADRMLDA-EFLDQVQEVIAACTHPKIQK 324
Query: 76 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 135
++FSATLP E++A +++D +RV+VG K+T I Q L + + KL L ++
Sbjct: 325 AVFSATLPASAEKVAMGMLNDPIRVVVGLKDTPLPLISQSLTYVADDASKLPTLLTYLSQ 384
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDI-RAGVIHSDLSQTQ 176
NPP+LIFV S+ RA L EL + V+H+ +S+ +
Sbjct: 385 PYNPPLLIFVSSQPRASSLAEELVISSVPNVDVLHAGMSRKE 426
>gi|169844518|ref|XP_001828980.1| ROK1 [Coprinopsis cinerea okayama7#130]
gi|116510092|gb|EAU92987.1| ROK1 [Coprinopsis cinerea okayama7#130]
Length = 574
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 99/162 (61%), Gaps = 2/162 (1%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
DI++STPLRL A++ K +L V YLVLDEAD+L + L+ + +V +C++ + +
Sbjct: 262 TDIIVSTPLRLVAAVQEGKFELENVRYLVLDEADRLLDT-EFLEQTEELVASCTHSRLQK 320
Query: 76 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 135
++FSATLP VE++A ++ D +R++VG K+T I Q L + + KL +L A+
Sbjct: 321 AIFSATLPAGVEKIAMDMLQDPIRLVVGLKDTPLPLISQSLTYVADDGSKLPSLLTYLAQ 380
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIR-AGVIHSDLSQTQ 176
NPPVL+F S+ RA L EL ++I+ +H+ ++ +
Sbjct: 381 PYNPPVLVFTSSQPRATSLAEELLLNNIKNVDCLHAGMTNKE 422
>gi|302695853|ref|XP_003037605.1| hypothetical protein SCHCODRAFT_13834 [Schizophyllum commune H4-8]
gi|300111302|gb|EFJ02703.1| hypothetical protein SCHCODRAFT_13834 [Schizophyllum commune H4-8]
Length = 524
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 100/161 (62%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DI+ISTPLRL +++ ++L V +L+LDEAD++ + L ++ ++ +C++P + ++
Sbjct: 245 DIIISTPLRLVASLQTGDLELQNVRHLILDEADRMLDP-EFLSQVEEIIASCTHPDVQKA 303
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSATLP E++A ++ + +R++VG K+T I Q L + + KL +L Q FAE
Sbjct: 304 VFSATLPAGAEKIAMDMLRNPIRIVVGLKDTPLPLISQSLTYVADDGSKLPSLLQYFAEP 363
Query: 137 LNPPVLIFVQSKDRAKELYGELAFDDI-RAGVIHSDLSQTQ 176
NPPVLIF ++ RA L EL + I +H+ +++ +
Sbjct: 364 YNPPVLIFTSTQPRASSLAEELILNGIPNVDCLHAGMTKKE 404
>gi|148226210|ref|NP_001079530.1| Probable ATP-dependent RNA helicase DDX52-like [Xenopus laevis]
gi|27882196|gb|AAH44017.1| MGC53409 protein [Xenopus laevis]
Length = 686
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/143 (44%), Positives = 93/143 (65%), Gaps = 4/143 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDLS VE+L++DE+DKLFE G + + AC++
Sbjct: 293 DILVTTPNRLIYLLKQDPPGIDLSSVEWLIVDESDKLFEDGKTGFRDQLASIFVACTSHL 352
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + V V VG +N+A E+++Q L+F GSE GKLLA+R
Sbjct: 353 LKRAMFSATFAFDVEQWCKLHLDNVVSVSVGARNSAVETVEQSLLFVGSETGKLLAMRNL 412
Query: 133 FAESLNPPVLIFVQSKDRAKELY 155
+ PPVL FVQS +RAKEL+
Sbjct: 413 IKKGFTPPVLAFVQSVERAKELF 435
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 77/136 (56%), Gaps = 8/136 (5%)
Query: 43 LVLDEADKLFEVGNLLKH--IDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRV 100
V E KL + NL+K PV+ + + LF VE+ + + + V V
Sbjct: 398 FVGSETGKLLAMRNLIKKGFTPPVLAFVQSVERAKELF------HVEQWCKLHLDNVVSV 451
Query: 101 IVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAF 160
VG +N+A E+++Q L+F GSE GKLLA+R + PPVL FVQS +RAKEL+ EL +
Sbjct: 452 SVGARNSAVETVEQSLLFVGSETGKLLAMRNLIKKGFTPPVLAFVQSVERAKELFHELIY 511
Query: 161 DDIRAGVIHSDLSQTQ 176
+ I VIH++ +Q Q
Sbjct: 512 EGINVDVIHAERTQQQ 527
>gi|159479390|ref|XP_001697776.1| hypothetical protein CHLREDRAFT_176386 [Chlamydomonas reinhardtii]
gi|158274144|gb|EDO99928.1| predicted protein [Chlamydomonas reinhardtii]
Length = 555
Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 58/121 (47%), Positives = 79/121 (65%), Gaps = 1/121 (0%)
Query: 55 GNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQ 114
G +D ++ A +P + R+LFSATLP+ VE+LARS+ +R+ VG KN A+ S+ Q
Sbjct: 277 GTDFSKVDALLAAAQHPDVSRALFSATLPERVEDLARSVQQQPLRITVGMKNAATSSVNQ 336
Query: 115 KLVFAGSEEGKLLALRQSFAE-SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLS 173
KL F G E GKLLALRQ+ A+ L PPVL+FV SK+RAK L+ EL +D + I +
Sbjct: 337 KLHFVGREAGKLLALRQALADGGLKPPVLVFVGSKERAKALHRELLYDGVHVDSITAGQP 396
Query: 174 Q 174
Q
Sbjct: 397 Q 397
>gi|336374435|gb|EGO02772.1| hypothetical protein SERLA73DRAFT_176143 [Serpula lacrymans var.
lacrymans S7.3]
gi|336387328|gb|EGO28473.1| hypothetical protein SERLADRAFT_458915 [Serpula lacrymans var.
lacrymans S7.9]
Length = 564
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 91/147 (61%), Gaps = 1/147 (0%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DI++STPLRL +++ ++L+ V +LVLDEAD+L + L + +V C+ P+I ++
Sbjct: 252 DIIVSTPLRLVASLQAGNLNLNNVRHLVLDEADRLLDP-EFLSQVQEIVAVCTYPNIQKA 310
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSATLP VE LA ++ + +RV+VG K+T I Q L + + KL +L FA+
Sbjct: 311 VFSATLPAGVEALAMGMLRNPIRVVVGLKDTPLPLIAQTLTYVADDSSKLPSLLTYFAQP 370
Query: 137 LNPPVLIFVQSKDRAKELYGELAFDDI 163
NPPVL+F ++ RA L EL + +
Sbjct: 371 YNPPVLVFTSTQTRATSLAEELVMNGL 397
>gi|170593001|ref|XP_001901253.1| Helicase conserved C-terminal domain containing protein [Brugia
malayi]
gi|158591320|gb|EDP29933.1| Helicase conserved C-terminal domain containing protein [Brugia
malayi]
Length = 1209
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 94/152 (61%), Gaps = 6/152 (3%)
Query: 8 STDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGN-----LLKHID 62
S +LS S +I+ISTP +L A+++ KI + + +LV+DE+D+LF+ +
Sbjct: 900 SQNLS-VSSNIVISTPNKLVYALKKNKILSNGLNWLVVDESDRLFDTTEGDDRCFRSQLA 958
Query: 63 PVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSE 122
+ + CS + R+ FSAT VE+ + ++D + +G +N+A S+KQ+LVFAGSE
Sbjct: 959 KIYQICSESPVRRAFFSATFSYEVEDWCKKNLNDVAMICIGSRNSAVNSVKQELVFAGSE 1018
Query: 123 EGKLLALRQSFAESLNPPVLIFVQSKDRAKEL 154
GK+ +L+ F S PP LIFVQSK RAK+L
Sbjct: 1019 HGKVTSLKALFQNSFKPPALIFVQSKLRAKQL 1050
>gi|393218769|gb|EJD04257.1| P-loop containing nucleoside triphosphate hydrolase protein
[Fomitiporia mediterranea MF3/22]
Length = 573
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 98/162 (60%), Gaps = 2/162 (1%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DI++STPLRL +++R ++L V++LVLDEAD+L + L V+ AC +
Sbjct: 243 RVKVDIIVSTPLRLVDSMQRCNLELDNVQHLVLDEADRLLD-SEFLSQTQEVMNACMREN 301
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ +++FSATLP E++A + + VR+IVG K+T SI QKLV+ E KL L Q
Sbjct: 302 VQKAVFSATLPAGAEKIAMGALRNPVRIIVGLKDTPLPSITQKLVYVADESSKLPTLLQY 361
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIR-AGVIHSDLS 173
++ +PP++IF ++ RA L +L + ++ +H+ +S
Sbjct: 362 LSQPYSPPIIIFTSTQPRASSLAEQLVLNSVQNVDCLHAGMS 403
>gi|209881795|ref|XP_002142335.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
gi|209557941|gb|EEA07986.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
Length = 498
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 99/164 (60%), Gaps = 5/164 (3%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVV---KACSNPSI 73
DI +STP R + ++L ++VLDE DKL ++G ID ++ SN +
Sbjct: 226 DIAVSTPFRFAEICKSGIMNLKECSFIVLDEVDKLLDMG-FSPQIDEIIAHSNVISNGKV 284
Query: 74 VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 133
FSATLP+ V++LA SIM + V VG + AS++IKQ+L+ E GKL + RQ
Sbjct: 285 QVVAFSATLPNNVKDLAESIMKYPIEVTVGHRLAASKTIKQELICVTKESGKLESFRQLI 344
Query: 134 AES-LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ +N PVL+F SK+ A++L+ ++ FD++ +IHSD+++T+
Sbjct: 345 KQGRINLPVLLFTNSKENAQKLFSKIVFDNLLVDMIHSDMAKTK 388
>gi|399218830|emb|CCF75717.1| unnamed protein product [Babesia microti strain RI]
Length = 486
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 106/171 (61%), Gaps = 4/171 (2%)
Query: 7 RSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVK 66
++T+L++ DI ISTPL L +R I+L+ + L++DEADKLF++G ID ++
Sbjct: 224 KNTELTRL--DICISTPLTLIKLLRDGNINLNYCKILIMDEADKLFDLG-FESQIDEILS 280
Query: 67 ACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 126
++ R LFSAT+ V +L SIM D +++VG +N A +I Q+L+ +E GKL
Sbjct: 281 FLPKENVQRLLFSATMHGKVRKLVNSIMIDYYKILVGTENAACTNIAQELICVTNEAGKL 340
Query: 127 LALRQSFAES-LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
LRQ F + L PPVL+F+ S+++ +++ +LA D I+ + + LS+ +
Sbjct: 341 YTLRQMFLDGKLPPPVLVFISSREKVDKVFKQLANDGIQVAKLSAMLSKKE 391
>gi|170084181|ref|XP_001873314.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650866|gb|EDR15106.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 450
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 98/161 (60%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DI+ISTPLRL + + K++L+ V++LVLDEAD+L + L + +V ACS I ++
Sbjct: 150 DIIISTPLRLISSYQDGKLELNSVQHLVLDEADRLLDR-EFLPQVQEIVGACSFSGIQKA 208
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSATLP +E+LA ++ + +RV+VG K+T I Q L + + KL +L ++
Sbjct: 209 VFSATLPAEIEKLALEMLRNPIRVVVGLKDTPLPLISQSLTYVADDPSKLPSLLAYLSQP 268
Query: 137 LNPPVLIFVQSKDRAKELYGELAFDDI-RAGVIHSDLSQTQ 176
NPPVL+F S+ RA L EL + I +H+ L++ +
Sbjct: 269 YNPPVLVFTSSQPRATSLAEELVLNGISNVDCLHAGLTRKE 309
>gi|145506703|ref|XP_001439312.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406496|emb|CAK71915.1| unnamed protein product [Paramecium tetraurelia]
Length = 493
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 99/159 (62%), Gaps = 7/159 (4%)
Query: 17 DILISTPLR-LRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
DILIS+PL+ L+L K +DLS VEY+++DEADK FE+G LL + +++ + I
Sbjct: 216 DILISSPLKFLKL---HKVVDLSTVEYVIMDEADKYFELG-LLAQVKQLLRILESLQITY 271
Query: 76 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 135
FSATLP+ VE++ R ++ D +++++G +N I Q+L + +E GK+ ++ E
Sbjct: 272 MFFSATLPEPVEDIYRELLIDPIKIMIGGRNHVLSRIDQQLRYVSNEYGKIQEIKNLINE 331
Query: 136 S-LNPPVLIFVQSKDRAKELYGEL-AFDDIRAGVIHSDL 172
+ PPVL+FVQSK RA+ L E+ IR IH D+
Sbjct: 332 GQMTPPVLVFVQSKTRAEALMYEIEQLKVIRVNCIHGDM 370
>gi|312087983|ref|XP_003145684.1| hypothetical protein LOAG_10109 [Loa loa]
Length = 537
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 90/145 (62%), Gaps = 5/145 (3%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEV--GN---LLKHIDPVVKACS 69
+ +I+ISTP +L A+++ + + +L++DE+D+LF+ GN + +AC+
Sbjct: 228 NANIVISTPNKLVHALKKNNKISTGLNWLIIDESDRLFDTTEGNDRCFRNQFATIYQACN 287
Query: 70 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 129
S+ R+ FSAT VE+ + + D + +G +N+A S+KQ+L+FAGSE GK++ L
Sbjct: 288 GNSVCRAFFSATFSYEVEDWCKRNLCDMAMICIGSRNSAVSSVKQELIFAGSEHGKIIGL 347
Query: 130 RQSFAESLNPPVLIFVQSKDRAKEL 154
+ F S PP LIFVQSK RAK+L
Sbjct: 348 KALFQNSFEPPALIFVQSKLRAKQL 372
>gi|323337542|gb|EGA78787.1| Rok1p [Saccharomyces cerevisiae Vin13]
Length = 310
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 73/101 (72%), Gaps = 1/101 (0%)
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSAT+P VEE+A+SIM D VRVI+G K A+ +I+QKL+F G+EEGKL+A+RQ E
Sbjct: 1 MFSATIPSNVEEIAQSIMMDPVRVIIGHKEAANTNIEQKLIFCGNEEGKLIAIRQLVQEG 60
Query: 137 -LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
PP++IF++S RAK LY EL +D I VIH++ + Q
Sbjct: 61 EFKPPIIIFLESITRAKALYHELMYDRINVDVIHAERTALQ 101
>gi|4689114|gb|AAD27766.1|AF077033_1 putative ATP-dependent RNA helicase ROK1 [Homo sapiens]
Length = 598
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 99/164 (60%), Gaps = 5/164 (3%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLF--EVGNLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+LV+DE+DKL + G+ + P
Sbjct: 287 DILVTTPNRLIYLLKQDPPGIDLASVEWLVVDESDKLLKMQTGSETSWL-PFSWPAHPTR 345
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT VE+ S + + +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 346 SEEPMFSATFAYDVEQWCNSTWTMSSVCPLEARNSAVETVEQELLFVGSETGKLLAVREL 405
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ NPPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 406 VKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 449
>gi|393911181|gb|EFO18387.2| hypothetical protein LOAG_10109 [Loa loa]
Length = 542
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 90/145 (62%), Gaps = 5/145 (3%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEV--GN---LLKHIDPVVKACS 69
+ +I+ISTP +L A+++ + + +L++DE+D+LF+ GN + +AC+
Sbjct: 233 NANIVISTPNKLVHALKKNNKISTGLNWLIIDESDRLFDTTEGNDRCFRNQFATIYQACN 292
Query: 70 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 129
S+ R+ FSAT VE+ + + D + +G +N+A S+KQ+L+FAGSE GK++ L
Sbjct: 293 GNSVCRAFFSATFSYEVEDWCKRNLCDMAMICIGSRNSAVSSVKQELIFAGSEHGKIIGL 352
Query: 130 RQSFAESLNPPVLIFVQSKDRAKEL 154
+ F S PP LIFVQSK RAK+L
Sbjct: 353 KALFQNSFEPPALIFVQSKLRAKQL 377
>gi|344255681|gb|EGW11785.1| putative ATP-dependent RNA helicase DDX52 [Cricetulus griseus]
Length = 507
Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 102/164 (62%), Gaps = 15/164 (9%)
Query: 17 DILISTPLRLRLAIRRK--KIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+LV+DE+DKLFE G + + AC++
Sbjct: 96 DILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHK 155
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + V V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 156 VKRAMFSATFAYDVEQWCKLNLDNVVTVSIGARNSAVETVEQELLFVGSETGKLLAMREL 215
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+S+ +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 216 VKKSI-----------ERAKELFHELIYEGINVDVIHAERTQQQ 248
>gi|402594445|gb|EJW88371.1| hypothetical protein WUBG_00716 [Wuchereria bancrofti]
Length = 1245
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 90/146 (61%), Gaps = 6/146 (4%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSR-VEYLVLDEADKLFEVGN-----LLKHIDPVVKAC 68
+ +I+ISTP +L A+++ LS + +LV+DE+D+LF+ + + + C
Sbjct: 929 NANIVISTPNKLLYALKKNNKILSNGLNWLVVDESDRLFDTTEGDDRCFRSQLAKIYQVC 988
Query: 69 SNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLA 128
S + R+ FSAT VE+ + ++D + +G +N+A S+KQ+LVFAGSE GK+++
Sbjct: 989 SESPVRRAFFSATFSYEVEDWCKRNLNDVAMICIGSRNSAVNSVKQELVFAGSEHGKVIS 1048
Query: 129 LRQSFAESLNPPVLIFVQSKDRAKEL 154
L+ F S PP LIFVQSK RAK+L
Sbjct: 1049 LKGLFQNSFQPPALIFVQSKLRAKQL 1074
>gi|90076664|dbj|BAE88012.1| unnamed protein product [Macaca fascicularis]
Length = 423
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 93/149 (62%), Gaps = 11/149 (7%)
Query: 30 IRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVE 87
+R++KI+ R +KLFE G + + AC++ + R++FSAT VE
Sbjct: 135 LRKEKINFLR---------NKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVE 185
Query: 88 ELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQS 147
+ + + + + V +G +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS
Sbjct: 186 QWCKLNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQS 245
Query: 148 KDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 246 IERAKELFHELIYEGINVDVIHAERTQQQ 274
>gi|156843946|ref|XP_001645038.1| hypothetical protein Kpol_1072p50 [Vanderwaltozyma polyspora DSM
70294]
gi|160380640|sp|A7TKR8.1|DED1_VANPO RecName: Full=ATP-dependent RNA helicase DED1
gi|156115693|gb|EDO17180.1| hypothetical protein Kpol_1072p50 [Vanderwaltozyma polyspora DSM
70294]
Length = 650
Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats.
Identities = 63/172 (36%), Positives = 99/172 (57%), Gaps = 10/172 (5%)
Query: 10 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
DLS+ CD+L++TP RL + R ++ L+ V+YLVLDEAD++ ++G I +V C
Sbjct: 289 DLSR-GCDLLVATPGRLSDLLERGRVSLANVKYLVLDEADRMLDMG-FEPQIRQIVDGCD 346
Query: 70 NPSIVRS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK- 125
P + +FSAT PD ++ LAR + D + + VG+ + SE+I Q++++ + K
Sbjct: 347 MPPVGERQTLMFSATFPDDIQHLARDFLSDYIFLSVGKVGSTSENITQRILYVEDMDKKS 406
Query: 126 -LLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
LL L + + L LIFV++K A EL L D RA IH D +Q++
Sbjct: 407 TLLDLLSASNDGL---TLIFVETKRMADELTDFLIMQDFRATAIHGDRTQSE 455
>gi|313243489|emb|CBY42223.1| unnamed protein product [Oikopleura dioica]
Length = 410
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 94/162 (58%), Gaps = 12/162 (7%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDP---------VV 65
SC +L TP R+ + K++DLS+ + +VLDE DK+ E+ N L DP +
Sbjct: 183 SCHVLCGTPNRIINMLDSKELDLSKCQMIVLDECDKMLEITNKLNPDDPKSFSAQVNLLR 242
Query: 66 KACSNPSIVRSLFSATLPDFVEELARSIMHD-AVRVIVGRK-NTASESIKQKLVFAGSEE 123
C++ + LFSAT+ VE+ + ++ V V +G+ N ++++ QK+++ G+E
Sbjct: 243 SQCADNHQM-GLFSATMSGSVEKFGHANFNNQGVTVAIGKSGNAVNQNVSQKVIYCGNER 301
Query: 124 GKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRA 165
GKLLALR+ + PP ++F ++K+R + + GEL +D I A
Sbjct: 302 GKLLALREFIKDGFRPPAILFTETKERCQRIMGELLYDGINA 343
>gi|17508543|ref|NP_492326.1| Protein R05D11.4 [Caenorhabditis elegans]
gi|3878881|emb|CAA99891.1| Protein R05D11.4 [Caenorhabditis elegans]
Length = 581
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 85/143 (59%), Gaps = 7/143 (4%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEV--GN---LLKHIDPVVKACSNP 71
DIL+STP R+ + KID S + +LV+DE+D+LFEV G + + KAC
Sbjct: 249 DILVSTPNRIVFHL--DKIDTSSLRWLVVDESDRLFEVVEGQDKCFRNQLAAIYKACDAK 306
Query: 72 SIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
+ FSAT VE+ + + + V VG +N+++ S+KQKL + G+E+GK +A+R
Sbjct: 307 CTRVAFFSATFSHEVEKWCKENIDEIGMVCVGERNSSNTSVKQKLTYCGTEDGKKIAIRN 366
Query: 132 SFAESLNPPVLIFVQSKDRAKEL 154
S PP L+FVQSKDRA +L
Sbjct: 367 LLRTSFKPPALVFVQSKDRAVQL 389
>gi|397581350|gb|EJK51897.1| hypothetical protein THAOC_28888, partial [Thalassiosira oceanica]
Length = 316
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 81/132 (61%), Gaps = 16/132 (12%)
Query: 56 NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNT-------- 107
L+ ID V+ + P+ R+LFSATL V L+ SI+ R GR++
Sbjct: 51 TFLQQIDAVLSSLP-PTATRALFSATLGPSVRHLSESIL----RGPPGRRHGGAVGGDSA 105
Query: 108 ---ASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIR 164
ASE I+Q+L F G EEGKLLA+RQ AE ++PPVL+FVQSK+RA+ L+GEL +D IR
Sbjct: 106 ASGASEHIRQELKFVGREEGKLLAIRQLVAEGIDPPVLVFVQSKERAQALFGELLYDGIR 165
Query: 165 AGVIHSDLSQTQ 176
V+H+ S Q
Sbjct: 166 VDVVHAGRSHGQ 177
>gi|254584210|ref|XP_002497673.1| ZYRO0F10934p [Zygosaccharomyces rouxii]
gi|238940566|emb|CAR28740.1| ZYRO0F10934p [Zygosaccharomyces rouxii]
Length = 603
Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 60/164 (36%), Positives = 96/164 (58%), Gaps = 5/164 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL + R KI L++V+YLVLDEAD++ ++G I +V+ C P + +
Sbjct: 267 CDLLVATPGRLNDLLERGKISLAKVKYLVLDEADRMLDMG-FEPQIRNIVEGCDMPGVDQ 325
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + D + + VGR + SE+I Q++++ E+ K AL
Sbjct: 326 RQTLMFSATFPVDIQHLARDFLSDYIFLSVGRVGSTSENITQRVLYVEDEDKK-SALLDL 384
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ S LIFV++K A +L L + RA IH D +Q++
Sbjct: 385 LSASSGGLTLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSE 428
>gi|242774133|ref|XP_002478380.1| ATP dependent RNA helicase (Rok1), putative [Talaromyces stipitatus
ATCC 10500]
gi|218721999|gb|EED21417.1| ATP dependent RNA helicase (Rok1), putative [Talaromyces stipitatus
ATCC 10500]
Length = 748
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/209 (36%), Positives = 116/209 (55%), Gaps = 50/209 (23%)
Query: 7 RSTDLSKFSCDILISTPLRLRLAIRRKKID----LSRVEYLVLDEADKLFEVGNLLKHID 62
+S +L+K DIL++TPL L A+ K + L V +LVLDEAD L +D
Sbjct: 365 KSGNLTK--SDILVTTPLALVNALTVKDTEETESLPSVRHLVLDEADVL---------LD 413
Query: 63 PVVK--------ACSNPSIVRSLFSATLPDFVEELARSIM---HDAV--------RVIVG 103
P+ + +C+NP + S +SAT+ +EEL +SI+ H+++ R+++G
Sbjct: 414 PLFREQTLAIWTSCNNPDLGISFYSATMGSSIEELTKSILESRHESLNAKKRPLLRLVIG 473
Query: 104 RKNTASESIKQKLVFAGSEEGKLLALRQSFAES---------LNPPVLIFVQSKDRAKEL 154
K+TA +I+ KL++A +E+GKLL LRQ + L PP L+F Q+ RA L
Sbjct: 474 LKDTAVPNIQHKLIYAATEQGKLLGLRQLLHPTAAIAPNEVRLRPPFLVFTQTITRAVAL 533
Query: 155 YGELAFD-DIRAG------VIHSDLSQTQ 176
+ EL +D I AG V+HSDLS+T+
Sbjct: 534 HSELLYDIPIEAGGSSRIAVLHSDLSETR 562
>gi|50292931|ref|XP_448898.1| hypothetical protein [Candida glabrata CBS 138]
gi|74664283|sp|Q8TFK8.1|DED1_CANGA RecName: Full=ATP-dependent RNA helicase DED1
gi|20086311|gb|AAM08102.1| DED1p [Candida glabrata]
gi|49528211|emb|CAG61868.1| unnamed protein product [Candida glabrata]
Length = 617
Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats.
Identities = 61/164 (37%), Positives = 93/164 (56%), Gaps = 5/164 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL + R K+ LS V+YLVLDEAD++ ++G I +V+ C P
Sbjct: 279 CDLLVATPGRLNDLLERGKVSLSNVKYLVLDEADRMLDMG-FEPQIRHIVEDCDMPPTGE 337
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR +HD + + VGR + SE+I Q++++ + + K AL
Sbjct: 338 RQTLMFSATFPHDIQHLARDFLHDYIFLSVGRVGSTSENITQRILYVENRD-KNSALLDL 396
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
A S + LIFV++K A +L L + A IH D SQ +
Sbjct: 397 LAASNDNLTLIFVETKRMADQLTDFLIMQNFSATAIHGDRSQAE 440
>gi|357017323|gb|AET50690.1| hypothetical protein [Eimeria tenella]
Length = 639
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 96/169 (56%), Gaps = 9/169 (5%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG------NLLKHIDPVVKAC 68
+ D + +TPL L ++ K++ LS ++LVLDEAD+L + G LL I
Sbjct: 240 AADAVFATPLSLLTLLKEKRLSLSDCQHLVLDEADRLLDSGFSPQVDALLFEIKSATATA 299
Query: 69 SNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLA 128
I LFSATLP V LA SI + AV V VGR + A+ I+Q+LVF +E GKL A
Sbjct: 300 KRLHIC--LFSATLPPSVVLLAESITYGAVHVTVGRASAAAPQIEQELVFCSTEAGKLWA 357
Query: 129 LRQSFAE-SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L+ E L PP LIFV++++RA EL E+ + + ++H+ S+ Q
Sbjct: 358 LKNLRVERKLIPPCLIFVETQERASELLREMITEGMTVDLLHAAKSKQQ 406
>gi|308499411|ref|XP_003111891.1| hypothetical protein CRE_29486 [Caenorhabditis remanei]
gi|308268372|gb|EFP12325.1| hypothetical protein CRE_29486 [Caenorhabditis remanei]
Length = 593
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 85/143 (59%), Gaps = 7/143 (4%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEV--GN---LLKHIDPVVKACSNP 71
DIL+STP R+ + KID S + +L++DE+D+LFEV G + + KAC
Sbjct: 266 DILVSTPNRIVFHL--DKIDTSALRWLIVDESDRLFEVIEGQEKCFRNQLGAIYKACDAK 323
Query: 72 SIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
+ FSAT VE+ + + + V VG +N+++ S+KQ+L + G+E+GK +A+R
Sbjct: 324 CTRVAFFSATFSHEVEKWCKENIDNIGMVCVGERNSSNTSVKQELTYCGTEDGKKIAIRN 383
Query: 132 SFAESLNPPVLIFVQSKDRAKEL 154
S PP L+FVQSKDRA +L
Sbjct: 384 LLRTSFKPPALVFVQSKDRAVQL 406
>gi|156083731|ref|XP_001609349.1| DEAD/DEAH box helicase [Babesia bovis T2Bo]
gi|154796600|gb|EDO05781.1| DEAD/DEAH box helicase [Babesia bovis]
Length = 609
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 64/161 (39%), Positives = 94/161 (58%), Gaps = 4/161 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CDI ++TP RL + R +I L V YLVLDEAD++ ++G I VV+ S P R
Sbjct: 283 CDICVATPGRLTDILERNRIGLHCVSYLVLDEADRMLDMG-FAPQIRQVVEHSSMPQEGR 341
Query: 76 S--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 133
+FSAT P +++LAR + D + + VGR + +E I+Q+L++A E+ KL L +
Sbjct: 342 QTVMFSATFPKEIQQLARDFLRDYLYLAVGRVGSTNEFIRQRLLYADQEQ-KLHYLVKLL 400
Query: 134 AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
E+ N VLIFV++K RA + L ++ A IH D SQ
Sbjct: 401 RENTNGLVLIFVETKRRADMIESYLLKENFMAVNIHGDRSQ 441
>gi|341876893|gb|EGT32828.1| hypothetical protein CAEBREN_25081 [Caenorhabditis brenneri]
Length = 582
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 90/164 (54%), Gaps = 14/164 (8%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEV--GN---LLKHIDPVVKACS 69
+ DIL+STP R+ + KID S + +L++DE+D+LFEV G + + KAC
Sbjct: 249 TADILVSTPNRIVFHL--DKIDTSALRWLIVDESDRLFEVVEGQDKCFRNQLGAIYKACD 306
Query: 70 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 129
+ FSAT VE+ + + V VG +N+++ S+KQ+L + G+E+GK +A+
Sbjct: 307 AKCTRVAFFSATFSHEVEKWCKENIDSIGMVCVGERNSSNTSVKQELTYCGTEDGKKIAI 366
Query: 130 RQSFAESLNPPVLIFVQSKDRAKELY-------GELAFDDIRAG 166
R S PP L+FVQSKDRA +L L D I +G
Sbjct: 367 RNLLRTSFKPPALVFVQSKDRAVQLVKLLSAIDSNLKVDSINSG 410
>gi|407925460|gb|EKG18471.1| Helicase [Macrophomina phaseolina MS6]
Length = 773
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 100/176 (56%), Gaps = 31/176 (17%)
Query: 16 CDILISTPLRLRLAIRR---KKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
DIL+STPL L A++ K +S V+YLVLDEAD L + + +D + AC++P
Sbjct: 379 SDILVSTPLTLLHALQGSAGKTGTISSVKYLVLDEADVLLDPLFRQQTLD-IWNACTSPL 437
Query: 73 IVRSLFSATLPDFVEELARSIMH---------------DAVRVIVGRKNTASESIKQKLV 117
+ SL+SAT+ VEELA++ + + +R+IVG K++A +I +L
Sbjct: 438 LRVSLWSATMGSSVEELAKNTITSRWTSIESTTGITRPNLIRLIVGLKDSAVPNIHHQLT 497
Query: 118 FAGSEEGKLLALR------------QSFAESLNPPVLIFVQSKDRAKELYGELAFD 161
+A +E+GKLLA+R QS A SL PP LIF Q+ RA+ LY EL +D
Sbjct: 498 YAATEQGKLLAVRQLLHPTGTTKSSQSTAPSLRPPFLIFTQTIPRAQALYAELQYD 553
>gi|341899895|gb|EGT55830.1| hypothetical protein CAEBREN_29719 [Caenorhabditis brenneri]
Length = 582
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 90/164 (54%), Gaps = 14/164 (8%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEV--GN---LLKHIDPVVKACS 69
+ DIL+STP R+ + KID S + +L++DE+D+LFEV G + + KAC
Sbjct: 249 TADILVSTPNRIVFHL--DKIDTSALRWLIVDESDRLFEVVEGQDKCFRNQLGAIYKACD 306
Query: 70 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 129
+ FSAT VE+ + + V VG +N+++ S+KQ+L + G+E+GK +A+
Sbjct: 307 AKCTRVAFFSATFSHEVEKWCKENIDSIGMVCVGERNSSNTSVKQELTYCGTEDGKKIAI 366
Query: 130 RQSFAESLNPPVLIFVQSKDRAKELY-------GELAFDDIRAG 166
R S PP L+FVQSKDRA +L L D I +G
Sbjct: 367 RNLLRTSFKPPALVFVQSKDRAVQLVKLLSAIDSNLKVDSINSG 410
>gi|270003649|gb|EFA00097.1| hypothetical protein TcasGA2_TC002912 [Tribolium castaneum]
Length = 557
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 97/180 (53%), Gaps = 29/180 (16%)
Query: 1 MKKELVRSTDLSKFSCDILISTPLRLRLAIRRKK--IDLSRVEYLVLDEADKLFEVGN-- 56
+ K L++ S DILI+TP R+ +++ + + L+ +++LV+DEADKLFE GN
Sbjct: 221 INKALIQYGPNSSQKFDILITTPNRVCFLLKQDQAALSLANIKWLVIDEADKLFETGNRG 280
Query: 57 LLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKL 116
+ +D ++ AC+N ++FSAT V + M VR+ VG+++ L
Sbjct: 281 FREQLDQILNACTNKEKKVAMFSATYTPMVAKWCVHNMKGLVRITVGQRD---------L 331
Query: 117 VFAGSEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
V G L PPVL+FVQSKDRA++L+ EL +D I IH+D +Q Q
Sbjct: 332 VKKG----------------LTPPVLVFVQSKDRAQQLFNELIYDGINVDAIHADRTQLQ 375
>gi|255728663|ref|XP_002549257.1| hypothetical protein CTRG_03554 [Candida tropicalis MYA-3404]
gi|240133573|gb|EER33129.1| hypothetical protein CTRG_03554 [Candida tropicalis MYA-3404]
Length = 434
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 98/160 (61%), Gaps = 14/160 (8%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKA-CSNPSIVR 75
DILIS P RL + ++K+DLS + LVLDEADKLFE G+ D + SNPS+
Sbjct: 202 DILISAPKRLIDVVDKEKVDLSTINQLVLDEADKLFE-GDFAYQTDEITSHLSSNPSV-- 258
Query: 76 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 135
+L+SAT+P E+ + D +++ V S +++Q LVF +E GK+L +RQ
Sbjct: 259 ALYSATIP---SEIPID-LQDPIKIKV----DDSSNVEQSLVFT-NESGKVLGIRQLVQT 309
Query: 136 S-LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
S L+PPVLIF+QS RAK L+ EL +D ++ +IH L+
Sbjct: 310 SQLHPPVLIFLQSTIRAKALHRELLYDGLKVDLIHGGLTN 349
>gi|67517343|ref|XP_658548.1| hypothetical protein AN0944.2 [Aspergillus nidulans FGSC A4]
gi|74681451|sp|Q5BET6.1|ROK1_EMENI RecName: Full=ATP-dependent RNA helicase rok1
gi|40746817|gb|EAA65973.1| hypothetical protein AN0944.2 [Aspergillus nidulans FGSC A4]
gi|259488768|tpe|CBF88477.1| TPA: ATP-dependent RNA helicase rok1 (EC 3.6.1.-)
[Source:UniProtKB/Swiss-Prot;Acc:Q5BET6] [Aspergillus
nidulans FGSC A4]
Length = 742
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 106/192 (55%), Gaps = 32/192 (16%)
Query: 16 CDILISTPLRLRLAIRRKKID----LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP 71
DIL+STPL+L A+ K L V LVLDEAD L + + +D + ++C++P
Sbjct: 359 SDILVSTPLQLVNALSDNKTKPLATLPLVRNLVLDEADVLLDPLFRDQTLD-IWRSCTHP 417
Query: 72 SIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASESIKQKLVFA 119
+ SL+SAT+ +E++A++ + + +R++VG K++A +IK KLV+A
Sbjct: 418 ELRASLWSATMGSSIEDMAKTTIKERKLSLPQTKSYPLLRLVVGLKDSAIPNIKHKLVYA 477
Query: 120 GSEEGKLLALRQSFAES--------LNPPVLIFVQSKDRAKELYGELAFD-------DIR 164
+E+GKLL LRQ + L PP LIF Q+ RA L+ EL +D R
Sbjct: 478 ATEQGKLLGLRQLIHPTAATTSDVRLRPPFLIFTQTIPRAIALHSELLYDIPPEAGGSAR 537
Query: 165 AGVIHSDLSQTQ 176
V+HSDLS TQ
Sbjct: 538 IAVLHSDLSDTQ 549
>gi|268567592|ref|XP_002640036.1| Hypothetical protein CBG12508 [Caenorhabditis briggsae]
Length = 573
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 89/151 (58%), Gaps = 9/151 (5%)
Query: 9 TDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEV--GN---LLKHIDP 63
TD++ DIL+STP R+ + KID S + +LV+DE+D+LFEV G +
Sbjct: 240 TDITH--ADILVSTPNRIVFHL--DKIDTSLLRWLVVDESDRLFEVIEGQEKCFRNQLGA 295
Query: 64 VVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEE 123
+ KAC + FSAT VE+ + + + V VG +N+++ S+KQ+L + G+E+
Sbjct: 296 IYKACDAKCTRVAFFSATFSHEVEKWCKDNIENIGMVCVGERNSSNTSVKQELTYCGTED 355
Query: 124 GKLLALRQSFAESLNPPVLIFVQSKDRAKEL 154
GK +A+R + PP L+FVQSKDRA +L
Sbjct: 356 GKKVAIRNLLRTAFRPPALVFVQSKDRAVQL 386
>gi|340504997|gb|EGR31377.1| hypothetical protein IMG5_111120 [Ichthyophthirius multifiliis]
Length = 464
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 86/140 (61%), Gaps = 3/140 (2%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DILI TPL+ +R + +++LV DEAD+ FE NL K + +++ + V
Sbjct: 123 DILICTPLKFLKITKRAQEKFEFLQFLVFDEADRYFEF-NLAKQMKKILENFQDLHKVNY 181
Query: 77 L-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF-A 134
L FSAT+ VEEL + ++H+ +++ VG KN + ++QKL + SE GKLL ++ +
Sbjct: 182 LLFSATIQHPVEELVKQLIHEPLKLTVGGKNNVLQCVEQKLQYCQSEFGKLLEIKNIINS 241
Query: 135 ESLNPPVLIFVQSKDRAKEL 154
NPPVLIFVQSKDR ++L
Sbjct: 242 GQFNPPVLIFVQSKDRGEQL 261
>gi|444720987|gb|ELW61747.1| Synergin gamma [Tupaia chinensis]
Length = 2242
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 77/110 (70%)
Query: 67 ACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 126
AC++ + R++FSAT VE+ + + + + V +G +N+A E+++Q+L+F GSE GKL
Sbjct: 340 ACTSHKVRRAMFSATFAYDVEQWCKLNLDNVITVSIGARNSAVETVEQELLFVGSETGKL 399
Query: 127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
LA+RQ + +PPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 400 LAMRQLVKKGFDPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 449
>gi|259149685|emb|CAY86489.1| Ded1p [Saccharomyces cerevisiae EC1118]
Length = 604
Score = 99.8 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 61/164 (37%), Positives = 96/164 (58%), Gaps = 5/164 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS-NPSIV 74
CD+L++TP RL + R KI L+ V+YLVLDEAD++ ++G I +V+ C P
Sbjct: 276 CDLLVATPGRLNDLLERGKISLANVKYLVLDEADRMLDMG-FEPQIRHIVEDCDMTPVGE 334
Query: 75 RS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
R +FSAT P ++ LAR + D + + VGR + SE+I QK+++ +++ K AL
Sbjct: 335 RQTLMFSATFPADIQHLARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKK-SALLDL 393
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ S + LIFV++K A +L L + RA IH D +Q++
Sbjct: 394 LSASTDGLTLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSE 437
>gi|255713704|ref|XP_002553134.1| KLTH0D09746p [Lachancea thermotolerans]
gi|238934514|emb|CAR22696.1| KLTH0D09746p [Lachancea thermotolerans CBS 6340]
Length = 621
Score = 99.8 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 61/164 (37%), Positives = 93/164 (56%), Gaps = 5/164 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL + R +I L ++YLVLDEAD++ ++G I +V+ C PS+
Sbjct: 283 CDLLVATPGRLSDLLERGRISLCNIKYLVLDEADRMLDMG-FEPQIRHIVEGCDMPSVDE 341
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + D V + VGR + SE+I Q +++ + K AL
Sbjct: 342 RQTLMFSATFPMDIQHLARDFLKDYVFLSVGRVGSTSENITQHVLYV-EDMDKKSALLDL 400
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
A S + LIFV++K A L L ++RA IH D SQ++
Sbjct: 401 LAASDDGLTLIFVETKRMADALTDFLIMQNLRATAIHGDRSQSE 444
>gi|366999310|ref|XP_003684391.1| hypothetical protein TPHA_0B02850 [Tetrapisispora phaffii CBS 4417]
gi|357522687|emb|CCE61957.1| hypothetical protein TPHA_0B02850 [Tetrapisispora phaffii CBS 4417]
Length = 628
Score = 99.4 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 59/164 (35%), Positives = 91/164 (55%), Gaps = 5/164 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL + R ++ L+ V+YLVLDEAD++ ++G I +V C P
Sbjct: 289 CDLLVATPGRLNDLLERGRVSLANVKYLVLDEADRMLDMG-FEPQIRHIVDGCDMPDANN 347
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT PD ++ LAR ++D + + VGR + SE+I Q++++ + K AL
Sbjct: 348 RQTLMFSATFPDDIQHLARDFLNDYIFLSVGRVGSTSENITQRILYV-EDMDKKSALLDL 406
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
A + LIFV++K A EL L D A IH D +Q +
Sbjct: 407 LAAENDGLTLIFVETKRMADELTDFLIMQDFMATAIHGDRTQIE 450
>gi|428671740|gb|EKX72655.1| DEAD box ATP-dependent RNA helicase family member protein [Babesia
equi]
Length = 591
Score = 99.4 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 59/161 (36%), Positives = 96/161 (59%), Gaps = 4/161 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+ ++TP RL + R+KI + V+YLVLDEAD++ ++G I +V P I R
Sbjct: 273 CDVCVATPGRLTDLLERRKISFTFVKYLVLDEADRMLDMG-FAPQIRAIVDNNCMPKIGR 331
Query: 76 S--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 133
+FSAT P +++LAR ++D + + VGR + +E I+Q+L++A ++ K L +
Sbjct: 332 QTVMFSATFPKEIQQLARDFLNDYIYLAVGRVGSTNEFIRQRLIYADQDQ-KPKYLVKLL 390
Query: 134 AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
E+++ VLIFV++K RA + L ++ A IH D SQ
Sbjct: 391 KENVSGLVLIFVETKRRADMIEAYLQRENFSAVNIHGDRSQ 431
>gi|403217071|emb|CCK71566.1| hypothetical protein KNAG_0H01520 [Kazachstania naganishii CBS
8797]
Length = 621
Score = 99.4 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL + R KI L+ ++YL LDEAD++ ++G I +V+ C P +
Sbjct: 272 CDLLVATPGRLNDLLERGKISLANIKYLTLDEADRMLDMG-FEPQIRHIVEDCDMPPVNE 330
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR ++D + + VGR + SE+I QK+++ + K LL L
Sbjct: 331 RQTLMFSATFPRDIQHLARDFLNDYIFLSVGRVGSTSENITQKVLYVDDMDKKSALLDLL 390
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
S L LIFV++K A +L L +IRA IH D +Q +
Sbjct: 391 SSTKGGL---TLIFVETKRMADQLTDFLIMQNIRATAIHGDRTQME 433
>gi|349581361|dbj|GAA26519.1| K7_Ded1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 604
Score = 99.0 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 60/164 (36%), Positives = 95/164 (57%), Gaps = 5/164 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL + R KI L+ V+YLVLDEAD++ ++G I +V+ C I
Sbjct: 276 CDLLVATPGRLNDLLERGKISLANVKYLVLDEADRMLDMG-FEPQIRHIVEDCDMTPIGE 334
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + D + + VGR + SE+I QK+++ +++ K AL
Sbjct: 335 RQTLMFSATFPADIQHLARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKK-SALLDL 393
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ S + LIFV++K A +L L + RA IH D +Q++
Sbjct: 394 LSASTDGLTLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSE 437
>gi|219111847|ref|XP_002177675.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410560|gb|EEC50489.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 483
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 109/208 (52%), Gaps = 37/208 (17%)
Query: 4 ELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDP 63
+++ + K D+L+STPLRL AI K + L+ V +VLDEAD+L + + + P
Sbjct: 129 QVIGGSAGGKSGLDMLVSTPLRLVDAIE-KGLRLNSVRIVVLDEADRLLDATDGKRARKP 187
Query: 64 VVKACSN-------------------------------PSI-VRSLFSATLPDFVEELAR 91
+A + PS R+LFSAT+ V LA
Sbjct: 188 KGEAGTESIVEDEEEEEEEEDDSSQSFLAQMDIVLSEVPSTATRALFSATVTPTVRFLAE 247
Query: 92 SIMHDAVRVIV---GRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQS 147
SI+ + + V + G A+ I+Q+L+F G E+GKLLA+RQ L+PP +IF++S
Sbjct: 248 SILRNPLDVTIANSGSVGGANTDIEQELMFVGKEQGKLLAIRQLVQRGQLHPPAIIFLES 307
Query: 148 KDRAKELYGELAFDDIRAGVIHSDLSQT 175
K+RA+ L+GEL +D I VIH+ S++
Sbjct: 308 KNRAQALFGELLYDGIHVDVIHAGRSKS 335
>gi|401842749|gb|EJT44825.1| DED1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 609
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 97/167 (58%), Gaps = 9/167 (5%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS-NPSI 73
CD+L++TP RL + R KI LS V+YLVLDEAD++ ++G I +V+ C P
Sbjct: 279 GCDLLVATPGRLNDLLERGKISLSNVKYLVLDEADRMLDMG-FEPQIRHIVEDCDMTPVG 337
Query: 74 VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 129
R +FSAT P ++ LAR + D + + VGR + SE+I QK+++ +++ K LL L
Sbjct: 338 ARQTLMFSATFPADIQHLARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKKSALLDL 397
Query: 130 RQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + L LIFV++K A +L L + RA IH D +Q++
Sbjct: 398 LSASTDGL---TLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSE 441
>gi|366989727|ref|XP_003674631.1| hypothetical protein NCAS_0B01730 [Naumovozyma castellii CBS 4309]
gi|342300495|emb|CCC68257.1| hypothetical protein NCAS_0B01730 [Naumovozyma castellii CBS 4309]
Length = 618
Score = 99.0 bits (245), Expect = 7e-19, Method: Composition-based stats.
Identities = 62/164 (37%), Positives = 94/164 (57%), Gaps = 5/164 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS-NPSIV 74
CD+L++TP RL I R KI LS V+YLVLDEAD++ ++G I +V+ P
Sbjct: 280 CDLLVATPGRLSDLIDRGKISLSNVKYLVLDEADRMLDMG-FEPQIRAIVEGADMTPVGE 338
Query: 75 RS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
R +FSAT P ++ LAR + D + + VGR + SE+I Q++++ +++ K AL
Sbjct: 339 RQTLMFSATFPADIQHLARDFLADYIFLSVGRVGSTSENITQRVLYVENQDKK-SALLDL 397
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ S + LIFV++K A +L L D RA IH D +Q +
Sbjct: 398 LSASNDGLTLIFVETKRMADQLTDFLIMQDFRATAIHGDRTQQE 441
>gi|367009202|ref|XP_003679102.1| hypothetical protein TDEL_0A05590 [Torulaspora delbrueckii]
gi|359746759|emb|CCE89891.1| hypothetical protein TDEL_0A05590 [Torulaspora delbrueckii]
Length = 597
Score = 98.6 bits (244), Expect = 8e-19, Method: Composition-based stats.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL + R KI L++V+YLVLDEAD++ ++G I +V+ C P +
Sbjct: 274 CDLLVATPGRLNDLLERGKISLAKVKYLVLDEADRMLDMG-FEPQIRHIVEGCDMPGVED 332
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + D + + VGR + SE+I Q +++ E+ K LL L
Sbjct: 333 RQTLMFSATFPVDIQHLARDFLSDYIFLSVGRVGSTSENITQHVLYVEDEDKKSALLDLI 392
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
S + L LIFV++K A +L L + A IH D +Q +
Sbjct: 393 SSATDGL---TLIFVETKRMADQLTDFLIMQNFAATAIHGDRTQGE 435
>gi|313226555|emb|CBY21701.1| unnamed protein product [Oikopleura dioica]
Length = 547
Score = 98.6 bits (244), Expect = 8e-19, Method: Composition-based stats.
Identities = 56/162 (34%), Positives = 95/162 (58%), Gaps = 12/162 (7%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
SC +L TP R+ + K++DLS+ + +VLDE DK+ E+ N L DP + +++
Sbjct: 183 SCHVLCGTPNRIINMLDSKELDLSKCQMIVLDECDKMLEITNKLNPDDPK-SFSAQVNLL 241
Query: 75 RS---------LFSATLPDFVEELARSIMHD-AVRVIVGRK-NTASESIKQKLVFAGSEE 123
RS LFSAT+ VE+ + ++ V V +G+ N ++++ QK+++ G+E
Sbjct: 242 RSQCADNHQMGLFSATMSGSVEKFGHANFNNQGVTVAIGKSGNAVNQNVSQKVIYCGNER 301
Query: 124 GKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRA 165
GKLLALR+ + PP ++F ++K+R + + GEL +D I A
Sbjct: 302 GKLLALREFIKDGFRPPAILFTETKERCQRIMGELLYDGINA 343
>gi|410081586|ref|XP_003958372.1| hypothetical protein KAFR_0G02030 [Kazachstania africana CBS 2517]
gi|372464960|emb|CCF59237.1| hypothetical protein KAFR_0G02030 [Kazachstania africana CBS 2517]
Length = 606
Score = 98.6 bits (244), Expect = 9e-19, Method: Composition-based stats.
Identities = 62/164 (37%), Positives = 94/164 (57%), Gaps = 5/164 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS-NPSIV 74
CD+L++TP RL + R KI L+ V+YLVLDEAD++ ++G I +V+ C P
Sbjct: 272 CDLLVATPGRLSDLLERGKISLANVKYLVLDEADRMLDMG-FEPQIRHIVEGCDMTPVGE 330
Query: 75 RS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
R +FSAT P ++ LAR + D + + VGR + SE+I Q++++ E+ K AL
Sbjct: 331 RQTLMFSATFPADIQHLARDFLSDYIFLSVGRVGSTSENITQRVLYVEDEDKK-SALLDL 389
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
A S LIFV++K A +L L + RA IH D +Q++
Sbjct: 390 LAASDEGLTLIFVETKRLADQLTDFLIMQNFRATAIHGDRTQSE 433
>gi|323307275|gb|EGA60555.1| Ded1p [Saccharomyces cerevisiae FostersO]
Length = 605
Score = 98.6 bits (244), Expect = 9e-19, Method: Composition-based stats.
Identities = 61/164 (37%), Positives = 96/164 (58%), Gaps = 5/164 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS-NPSIV 74
CD+L++TP RL + R KI L+ V+YLVLDEAD++ ++G I +V+ C P
Sbjct: 277 CDLLVATPGRLNDLLERGKISLANVKYLVLDEADRMLDMG-FEPQIRHIVEDCDMTPVGE 335
Query: 75 RS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
R +FSAT P ++ LAR + D + + VGR + SE+I QK+++ +++ K AL
Sbjct: 336 RQTLMFSATFPADIQHLARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKK-SALLDL 394
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ S + LIFV++K A +L L + RA IH D +Q++
Sbjct: 395 LSASTDGLTLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSE 438
>gi|323302935|gb|EGA56739.1| Ded1p [Saccharomyces cerevisiae FostersB]
Length = 604
Score = 98.6 bits (244), Expect = 9e-19, Method: Composition-based stats.
Identities = 61/164 (37%), Positives = 96/164 (58%), Gaps = 5/164 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS-NPSIV 74
CD+L++TP RL + R KI L+ V+YLVLDEAD++ ++G I +V+ C P
Sbjct: 276 CDLLVATPGRLNDLLERGKISLANVKYLVLDEADRMLDMG-FEPQIRHIVEDCDMTPVGE 334
Query: 75 RS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
R +FSAT P ++ LAR + D + + VGR + SE+I QK+++ +++ K AL
Sbjct: 335 RQTLMFSATFPADIQHLARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKK-SALLDL 393
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ S + LIFV++K A +L L + RA IH D +Q++
Sbjct: 394 LSASTDGLTLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSE 437
>gi|160380641|sp|A6ZP47.1|DED1_YEAS7 RecName: Full=ATP-dependent RNA helicase DED1
gi|151945294|gb|EDN63537.1| ATP-dependent RNA helicase [Saccharomyces cerevisiae YJM789]
gi|190407515|gb|EDV10782.1| hypothetical protein SCRG_01592 [Saccharomyces cerevisiae RM11-1a]
gi|207341041|gb|EDZ69208.1| YOR204Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256269590|gb|EEU04872.1| Ded1p [Saccharomyces cerevisiae JAY291]
gi|323335425|gb|EGA76711.1| Ded1p [Saccharomyces cerevisiae Vin13]
gi|323352139|gb|EGA84676.1| Ded1p [Saccharomyces cerevisiae VL3]
Length = 604
Score = 98.6 bits (244), Expect = 9e-19, Method: Composition-based stats.
Identities = 61/164 (37%), Positives = 96/164 (58%), Gaps = 5/164 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS-NPSIV 74
CD+L++TP RL + R KI L+ V+YLVLDEAD++ ++G I +V+ C P
Sbjct: 276 CDLLVATPGRLNDLLERGKISLANVKYLVLDEADRMLDMG-FEPQIRHIVEDCDMTPVGE 334
Query: 75 RS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
R +FSAT P ++ LAR + D + + VGR + SE+I QK+++ +++ K AL
Sbjct: 335 RQTLMFSATFPADIQHLARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKK-SALLDL 393
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ S + LIFV++K A +L L + RA IH D +Q++
Sbjct: 394 LSASTDGLTLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSE 437
>gi|398365729|ref|NP_014847.3| Ded1p [Saccharomyces cerevisiae S288c]
gi|118411|sp|P06634.2|DED1_YEAST RecName: Full=ATP-dependent RNA helicase DED1; AltName: Full=DEAD
box protein 1
gi|3647|emb|CAA40546.1| Ded1p (Spp81p) [Saccharomyces cerevisiae]
gi|1420479|emb|CAA99419.1| DED1 [Saccharomyces cerevisiae]
gi|285815083|tpg|DAA10976.1| TPA: Ded1p [Saccharomyces cerevisiae S288c]
Length = 604
Score = 98.6 bits (244), Expect = 9e-19, Method: Composition-based stats.
Identities = 61/164 (37%), Positives = 96/164 (58%), Gaps = 5/164 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS-NPSIV 74
CD+L++TP RL + R KI L+ V+YLVLDEAD++ ++G I +V+ C P
Sbjct: 276 CDLLVATPGRLNDLLERGKISLANVKYLVLDEADRMLDMG-FEPQIRHIVEDCDMTPVGE 334
Query: 75 RS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
R +FSAT P ++ LAR + D + + VGR + SE+I QK+++ +++ K AL
Sbjct: 335 RQTLMFSATFPADIQHLARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKK-SALLDL 393
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ S + LIFV++K A +L L + RA IH D +Q++
Sbjct: 394 LSASTDGLTLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSE 437
>gi|50291147|ref|XP_448006.1| hypothetical protein [Candida glabrata CBS 138]
gi|74661189|sp|Q6FP38.1|DBP1_CANGA RecName: Full=ATP-dependent RNA helicase DBP1
gi|49527317|emb|CAG60957.1| unnamed protein product [Candida glabrata]
Length = 604
Score = 98.6 bits (244), Expect = 9e-19, Method: Composition-based stats.
Identities = 58/164 (35%), Positives = 93/164 (56%), Gaps = 5/164 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
C++L++TP RL + R KI L V+YLVLDEAD++ ++G I +V+ C PS+
Sbjct: 272 CNLLVATPGRLNDLLERGKISLVNVKYLVLDEADRMLDMG-FEPQIRHIVEDCDMPSVND 330
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + D + + VGR + SE+I+QK++F + K AL
Sbjct: 331 RQTLMFSATFPREIQHLARDFLKDYIFLSVGRVGSTSENIQQKVLFV-EDYDKNSALLDI 389
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
++ L+FV++K A +L L + +A IH D +Q +
Sbjct: 390 LINEIDGLTLVFVETKRMADQLTDFLIVQNFKATAIHGDRTQAE 433
>gi|323346404|gb|EGA80692.1| Ded1p [Saccharomyces cerevisiae Lalvin QA23]
gi|365762883|gb|EHN04415.1| Ded1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 608
Score = 98.6 bits (244), Expect = 9e-19, Method: Composition-based stats.
Identities = 61/164 (37%), Positives = 96/164 (58%), Gaps = 5/164 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS-NPSIV 74
CD+L++TP RL + R KI L+ V+YLVLDEAD++ ++G I +V+ C P
Sbjct: 280 CDLLVATPGRLNDLLERGKISLANVKYLVLDEADRMLDMG-FEPQIRHIVEDCDMTPVGE 338
Query: 75 RS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
R +FSAT P ++ LAR + D + + VGR + SE+I QK+++ +++ K AL
Sbjct: 339 RQTLMFSATFPADIQHLARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKK-SALLDL 397
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ S + LIFV++K A +L L + RA IH D +Q++
Sbjct: 398 LSASTDGLTLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSE 441
>gi|428671688|gb|EKX72606.1| DEAD box ATP-dependent RNA helicase family member protein [Babesia
equi]
Length = 474
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 95/165 (57%), Gaps = 6/165 (3%)
Query: 14 FSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI 73
F + ISTP L + + + L +YLVLDE DKL E G + HID +++A ++
Sbjct: 193 FDAPLAISTPKTLLTLLEKFEDMLKECKYLVLDEVDKLLEDG-YVDHIDKILEALRTKNV 251
Query: 74 ----VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 129
+ +FS+TL V L + M +A+ V +G +N A ++ Q+LV +++GKL+ L
Sbjct: 252 DAHVQKMIFSSTLQQSVLSLVSTFMPNAIHVTIGSENCACTNVSQELVCVTNDKGKLMTL 311
Query: 130 RQSFAES-LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLS 173
RQ E L PPVL+F+Q+ +R ELY EL +++R S+L+
Sbjct: 312 RQLILEGKLIPPVLVFLQTIERVNELYNELKGENVRVQKFTSELT 356
>gi|224015907|ref|XP_002297597.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220967714|gb|EED86099.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 216
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 70/113 (61%), Gaps = 9/113 (7%)
Query: 72 SIVRSLFSATLPDFVEELARSIMHDAVRVIVG---------RKNTASESIKQKLVFAGSE 122
+ R+LFSATL V L+ SI+ + + G ASE I+Q+L F G E
Sbjct: 8 TATRALFSATLGPSVRHLSESILRSPIDITTGIHAGIGGNSAAGGASEHIQQELKFVGRE 67
Query: 123 EGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
EGKLLA+RQ AE + PPVLIF+QSK+RA+ L+GEL +D IR VIH+ S +
Sbjct: 68 EGKLLAIRQLVAEGITPPVLIFLQSKERAQALFGELLYDGIRVDVIHAGRSAS 120
>gi|403213513|emb|CCK68015.1| hypothetical protein KNAG_0A03280 [Kazachstania naganishii CBS
8797]
Length = 607
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 64/165 (38%), Positives = 98/165 (59%), Gaps = 6/165 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS-NPSIV 74
CD+L++TP RL I R KI LS V+YLVLDEAD++ ++G ++ I +V+ C PS
Sbjct: 283 CDLLVATPGRLSDMIERGKISLSNVKYLVLDEADRMLDMGFEIQ-IRQIVEGCDMPPSSE 341
Query: 75 RS--LFSATLPDFVEELARSIMH-DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
R +FSAT P ++ LAR + D + + VG+ + SE+I Q++++ S + K AL
Sbjct: 342 RQTLMFSATFPADIQHLARDFLRPDYIFLSVGKVGSTSENITQRVMYVESMDKK-SALLD 400
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
A S LIFV++K A +L L ++RA IH D +Q++
Sbjct: 401 LLASSEPGLTLIFVETKRMADQLTDFLIMQNLRATAIHGDRTQSE 445
>gi|365986943|ref|XP_003670303.1| hypothetical protein NDAI_0E02430 [Naumovozyma dairenensis CBS 421]
gi|343769073|emb|CCD25060.1| hypothetical protein NDAI_0E02430 [Naumovozyma dairenensis CBS 421]
Length = 661
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 57/164 (34%), Positives = 94/164 (57%), Gaps = 5/164 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL + R KI L ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 319 CDLLVATPGRLSDLLERGKISLQNIKYLVLDEADRMLDMG-FEPQIRHIVEGVDMPQVGE 377
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P +++LAR ++D V + VGR + S++I QK+++ ++ K AL
Sbjct: 378 RQTLMFSATFPIDIQQLARDFLNDYVFLSVGRVGSTSDNITQKILYV-EDQDKYSALLDL 436
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + + LIFV++K A +L L + RA IH D +Q +
Sbjct: 437 LSATSDGLTLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQAE 480
>gi|401623547|gb|EJS41643.1| ded1p [Saccharomyces arboricola H-6]
Length = 620
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 58/164 (35%), Positives = 96/164 (58%), Gaps = 5/164 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL + R KI L+ V+YLVLDEAD++ ++G I +V+ C + +
Sbjct: 284 CDLLVATPGRLNDLLERGKISLANVKYLVLDEADRMLDMG-FEPQIRHIVEDCDMTPVGK 342
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + D + + VGR + SE+I QK+++ +++ K AL
Sbjct: 343 RQTLMFSATFPADIQHLARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKK-SALLDL 401
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + + LIFV++K A +L L + RA IH D +Q++
Sbjct: 402 LSATTDGLTLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSE 445
>gi|238483997|ref|XP_002373237.1| ATP dependent RNA helicase (Rok1), putative [Aspergillus flavus
NRRL3357]
gi|220701287|gb|EED57625.1| ATP dependent RNA helicase (Rok1), putative [Aspergillus flavus
NRRL3357]
Length = 426
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 107/192 (55%), Gaps = 32/192 (16%)
Query: 16 CDILISTPLRLRLAIRRKKID----LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP 71
DIL++TPL+L A+ K L V +VLDEAD L + + +D + +AC++P
Sbjct: 48 SDILVTTPLQLVNALSANKTKPMATLPLVRNIVLDEADVLLDPLFREQTLD-IWRACTHP 106
Query: 72 SIVRSLFSATLPDFVEELARSIMH---DA---------VRVIVGRKNTASESIKQKLVFA 119
+ SL+SAT+ +E+LA+S + DA R++VG K++A +I+ KLV+A
Sbjct: 107 ELRASLWSATMGSSIEDLAKSTIKERKDASSLTKSYPLYRLVVGLKDSAIPNIQHKLVYA 166
Query: 120 GSEEGKLLALRQ-----SFAES---LNPPVLIFVQSKDRAKELYGELAFD-------DIR 164
+E+GKLL LRQ + A S L PP LIF Q+ RA L+ EL +D R
Sbjct: 167 ATEQGKLLGLRQLLHPAAAAASDIRLRPPFLIFTQTIPRAVALHSELRYDIPPEAGGSSR 226
Query: 165 AGVIHSDLSQTQ 176
V+HSDLS Q
Sbjct: 227 IAVLHSDLSDGQ 238
>gi|365986773|ref|XP_003670218.1| hypothetical protein NDAI_0E01590 [Naumovozyma dairenensis CBS 421]
gi|343768988|emb|CCD24975.1| hypothetical protein NDAI_0E01590 [Naumovozyma dairenensis CBS 421]
Length = 608
Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 61/164 (37%), Positives = 94/164 (57%), Gaps = 5/164 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS-NPSIV 74
CD+L++TP RL I R KI LS V+YLVLDEAD++ ++G I +V+ P
Sbjct: 268 CDLLVATPGRLSDLIDRGKISLSNVKYLVLDEADRMLDMG-FEPQIRAIVEGADMTPVGE 326
Query: 75 RS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
R +FSAT P ++ LAR + D + + VGR + SE+I Q++++ +++ K AL
Sbjct: 327 RQTLMFSATFPADIQHLARDFLADYIFLSVGRVGSTSENITQRVLYVENQDKK-SALLDL 385
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ S + LIFV++K A +L L + RA IH D +Q +
Sbjct: 386 LSASEDGLTLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQAE 429
>gi|391874035|gb|EIT82990.1| ATP-dependent RNA helicase [Aspergillus oryzae 3.042]
Length = 725
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 106/192 (55%), Gaps = 32/192 (16%)
Query: 16 CDILISTPLRLRLAIRRKKID----LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP 71
DIL++TPL+L A+ K L V +VLDEAD L + + +D + +AC++P
Sbjct: 347 SDILVTTPLQLVNALSANKTKPMATLPLVRNIVLDEADVLLDPLFREQTLD-IWRACTHP 405
Query: 72 SIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASESIKQKLVFA 119
+ SL+SAT+ +E+LA+S + + R++VG K++A +I+ KLV+A
Sbjct: 406 ELRASLWSATMGSSIEDLAKSTIKERKDASSLTKSYPLYRLVVGLKDSAIPNIQHKLVYA 465
Query: 120 GSEEGKLLALRQ-----SFAES---LNPPVLIFVQSKDRAKELYGELAFD-------DIR 164
+E+GKLL LRQ + A S L PP LIF Q+ RA L+ EL +D R
Sbjct: 466 ATEQGKLLGLRQLLHPAAAAASDIRLRPPFLIFTQTIPRAVALHSELRYDIPPEAGGSSR 525
Query: 165 AGVIHSDLSQTQ 176
V+HSDLS Q
Sbjct: 526 IAVLHSDLSDGQ 537
>gi|169767166|ref|XP_001818054.1| ATP-dependent RNA helicase rok1 [Aspergillus oryzae RIB40]
gi|91207747|sp|Q2UQW3.1|ROK1_ASPOR RecName: Full=ATP-dependent RNA helicase rok1
gi|83765909|dbj|BAE56052.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 725
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 106/192 (55%), Gaps = 32/192 (16%)
Query: 16 CDILISTPLRLRLAIRRKKID----LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP 71
DIL++TPL+L A+ K L V +VLDEAD L + + +D + +AC++P
Sbjct: 347 SDILVTTPLQLVNALSANKTKPMATLPLVRNIVLDEADVLLDPLFREQTLD-IWRACTHP 405
Query: 72 SIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASESIKQKLVFA 119
+ SL+SAT+ +E+LA+S + + R++VG K++A +I+ KLV+A
Sbjct: 406 ELRASLWSATMGSSIEDLAKSTIKERKDASSLTKSYPLYRLVVGLKDSAIPNIQHKLVYA 465
Query: 120 GSEEGKLLALRQ-----SFAES---LNPPVLIFVQSKDRAKELYGELAFD-------DIR 164
+E+GKLL LRQ + A S L PP LIF Q+ RA L+ EL +D R
Sbjct: 466 ATEQGKLLGLRQLLHPAAAAASDIRLRPPFLIFTQTIPRAVALHSELRYDIPPEAGGSSR 525
Query: 165 AGVIHSDLSQTQ 176
V+HSDLS Q
Sbjct: 526 IAVLHSDLSDGQ 537
>gi|123420886|ref|XP_001305854.1| Type III restriction enzyme, res subunit family protein
[Trichomonas vaginalis G3]
gi|121887396|gb|EAX92924.1| Type III restriction enzyme, res subunit family protein
[Trichomonas vaginalis G3]
Length = 458
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 96/162 (59%), Gaps = 9/162 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
C I+I+TP RL + LS V+YLVLDEAD L + +K D V++ +
Sbjct: 167 CQIIIATPKRLTEFSSK----LSTVKYLVLDEADYLLS-HSFVKQTDDVLQNLPKEGVYY 221
Query: 76 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF-A 134
SLF+AT+ VEE ARS M + VR+ VG K+ + +I Q+L F G+E+GK++ L+Q +
Sbjct: 222 SLFTATMTPKVEETARSFMFNPVRIQVGDKHAIAANIDQELKFVGTEKGKVVELKQRIQS 281
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
++ P +IFV ++ RA +L EL + + V+ SD + T+
Sbjct: 282 GTIGLPCIIFVMNRQRAYDLSQELGYP---SAVLTSDENDTE 320
>gi|444316240|ref|XP_004178777.1| hypothetical protein TBLA_0B04200 [Tetrapisispora blattae CBS 6284]
gi|387511817|emb|CCH59258.1| hypothetical protein TBLA_0B04200 [Tetrapisispora blattae CBS 6284]
Length = 631
Score = 97.1 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 59/164 (35%), Positives = 91/164 (55%), Gaps = 5/164 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
C +L++TP RL + R +I L+ V+YLVLDEAD++ ++G I +V C P
Sbjct: 289 CALLVATPGRLNDLLERGRISLANVKYLVLDEADRMLDMG-FEPQIRHIVDGCDMPPAGE 347
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT PD ++ LAR + D + + VGR + SE+I Q +++ + K AL
Sbjct: 348 RQTLMFSATFPDDIQHLARDFLSDYIFLSVGRVGSTSENITQHILYV-EDMDKKSALLDL 406
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ S + LIFV++K A EL L + RA IH D +Q++
Sbjct: 407 LSASNSGLTLIFVETKRMADELTDFLIMQNFRATAIHGDRTQSE 450
>gi|392296531|gb|EIW07633.1| Ded1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 631
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 97/167 (58%), Gaps = 9/167 (5%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS-NPSI 73
CD+L++TP RL + R KI L+ V+YLVLDEAD++ ++G I +V+ C P
Sbjct: 302 GCDLLVATPGRLNDLLERGKISLANVKYLVLDEADRMLDMG-FEPQIRHIVEDCDMTPVG 360
Query: 74 VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 129
R +FSAT P ++ LAR + D + + VGR + SE+I QK+++ +++ K LL L
Sbjct: 361 ERQTLMFSATFPADIQHLARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKKSALLDL 420
Query: 130 RQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + L LIFV++K A +L L + RA IH D +Q++
Sbjct: 421 LSASTDGL---TLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSE 464
>gi|227524|prf||1705300A ATP dependent RNA helicase
Length = 604
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 97/167 (58%), Gaps = 9/167 (5%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS-NPSI 73
CD+L++TP RL + R KI L+ V+YLVLDEAD++ ++G I +V+ C P
Sbjct: 275 GCDLLVATPGRLNDLLERGKISLANVKYLVLDEADRMLDMG-FEPQIRHIVEDCDMTPVG 333
Query: 74 VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 129
R +FSAT P ++ LAR + D + + VGR + SE+I QK+++ +++ K LL L
Sbjct: 334 ERQTLMFSATFPADIQHLARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKKSALLDL 393
Query: 130 RQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + L LIFV++K A +L L + RA IH D +Q++
Sbjct: 394 LSASTDGL---TLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSE 437
>gi|160380607|sp|A6ZWD3.1|DBP1_YEAS7 RecName: Full=ATP-dependent RNA helicase DBP1; AltName: Full=DEAD
box protein 1; AltName: Full=Helicase CA1
gi|151942679|gb|EDN61025.1| DEAD box protein [Saccharomyces cerevisiae YJM789]
Length = 617
Score = 96.3 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 95/166 (57%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL + R K+ L+ ++YLVLDEAD++ ++G I +V+ C PS+
Sbjct: 288 CDLLVATPGRLNDLLERGKVSLANIKYLVLDEADRMLDMG-FEPQIRHIVEECDMPSVEN 346
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + + + + VGR + SE+I Q++++ + K LL L
Sbjct: 347 RQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVGSTSENITQRILYVDDMDKKSALLDLL 406
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + L LIFV++K A +L L + +A IH D +Q +
Sbjct: 407 SAEHKGL---TLIFVETKRMADQLTDFLIMQNFKATAIHGDRTQAE 449
>gi|366991525|ref|XP_003675528.1| hypothetical protein NCAS_0C01720 [Naumovozyma castellii CBS 4309]
gi|342301393|emb|CCC69162.1| hypothetical protein NCAS_0C01720 [Naumovozyma castellii CBS 4309]
Length = 640
Score = 96.3 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 57/164 (34%), Positives = 93/164 (56%), Gaps = 5/164 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R KI L+ + YLVLDEAD++ ++G I +V+ P +
Sbjct: 303 CDLLVATPGRLTDLIDRGKISLANIRYLVLDEADRMLDMG-FEPQIRQIVEGSDMPQVGD 361
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P +++LAR ++D + + VGR + SE+I Q +++ ++ K AL
Sbjct: 362 RQTLMFSATFPVDIQQLARDFLNDYIFLSVGRVGSTSENITQVILYV-EDQDKYSALLDL 420
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
A + + LIFV++K A +L L + +A IH D +Q +
Sbjct: 421 LAATTDGLTLIFVETKRMADQLTDFLIMQNFKATAIHGDRTQQE 464
>gi|296423228|ref|XP_002841157.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637391|emb|CAZ85348.1| unnamed protein product [Tuber melanosporum]
Length = 515
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 88/156 (56%), Gaps = 24/156 (15%)
Query: 33 KKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS--------NPSIVRSLFSATLPD 84
KK D S V L+LDEAD L +DP+ +A + +P + SLFSAT+
Sbjct: 183 KKTDWSSVSRLILDEADIL---------LDPLFRAQTLGIWTQLQSPHLRTSLFSATISS 233
Query: 85 FVEELARSIMHDA----VRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPP 140
E L + + + +R+IVG K+T ++I QKL + +E GKLLALRQ F S +PP
Sbjct: 234 STETLCQQHIPPSSSPTIRLIVGLKDTTIQNITQKLTYTATEPGKLLALRQLFTTSFHPP 293
Query: 141 VLIFVQSKDRAKELYGELAFD---DIRAGVIHSDLS 173
LIFVQ+ RA+ L E+ +D R V+H++LS
Sbjct: 294 ALIFVQTIPRARALVAEILYDLPTPGRIAVLHAELS 329
>gi|323352003|gb|EGA84542.1| Dbp1p [Saccharomyces cerevisiae VL3]
Length = 551
Score = 96.3 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 95/166 (57%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL + R K+ L+ ++YLVLDEAD++ ++G I +V+ C PS+
Sbjct: 222 CDLLVATPGRLNDLLERGKVSLANIKYLVLDEADRMLDMG-FEPQIRHIVEECDMPSVEN 280
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + + + + VGR + SE+I Q++++ + K LL L
Sbjct: 281 RQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVGSTSENITQRILYVDDMDKKSXLLDLL 340
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + L LIFV++K A +L L + +A IH D +Q +
Sbjct: 341 SAEHKGL---TLIFVETKRMADQLTDFLIMQNFKATAIHGDRTQAE 383
>gi|6325138|ref|NP_015206.1| Dbp1p [Saccharomyces cerevisiae S288c]
gi|1706311|sp|P24784.2|DBP1_YEAST RecName: Full=ATP-dependent RNA helicase DBP1; AltName: Full=DEAD
box protein 1; AltName: Full=Helicase CA1
gi|1163095|gb|AAB68243.1| Dbp1p: putative ATP-dependent DEAD box RNA helicase [Saccharomyces
cerevisiae]
gi|256274187|gb|EEU09095.1| Dbp1p [Saccharomyces cerevisiae JAY291]
gi|259150039|emb|CAY86842.1| Dbp1p [Saccharomyces cerevisiae EC1118]
gi|285815423|tpg|DAA11315.1| TPA: Dbp1p [Saccharomyces cerevisiae S288c]
gi|323346178|gb|EGA80468.1| Dbp1p [Saccharomyces cerevisiae Lalvin QA23]
gi|392295891|gb|EIW06994.1| Dbp1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 617
Score = 95.9 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 95/166 (57%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL + R K+ L+ ++YLVLDEAD++ ++G I +V+ C PS+
Sbjct: 288 CDLLVATPGRLNDLLERGKVSLANIKYLVLDEADRMLDMG-FEPQIRHIVEECDMPSVEN 346
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + + + + VGR + SE+I Q++++ + K LL L
Sbjct: 347 RQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVGSTSENITQRILYVDDMDKKSALLDLL 406
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + L LIFV++K A +L L + +A IH D +Q +
Sbjct: 407 SAEHKGL---TLIFVETKRMADQLTDFLIMQNFKATAIHGDRTQAE 449
>gi|349581699|dbj|GAA26856.1| K7_Dbp1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 617
Score = 95.9 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 95/166 (57%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL + R K+ L+ ++YLVLDEAD++ ++G I +V+ C PS+
Sbjct: 288 CDLLVATPGRLNDLLERGKVSLANIKYLVLDEADRMLDMG-FEPQIRHIVEECDMPSVEN 346
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + + + + VGR + SE+I Q++++ + K LL L
Sbjct: 347 RQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVGSTSENITQRILYVDDMDKKSALLDLL 406
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + L LIFV++K A +L L + +A IH D +Q +
Sbjct: 407 SAEHKGL---TLIFVETKRMADQLTDFLIMQNFKATAIHGDRTQAE 449
>gi|323335026|gb|EGA76316.1| Dbp1p [Saccharomyces cerevisiae Vin13]
gi|365762783|gb|EHN04316.1| Dbp1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 617
Score = 95.9 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 95/166 (57%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL + R K+ L+ ++YLVLDEAD++ ++G I +V+ C PS+
Sbjct: 288 CDLLVATPGRLNDLLERGKVSLANIKYLVLDEADRMLDMG-FEPQIRHIVEECDMPSVEN 346
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + + + + VGR + SE+I Q++++ + K LL L
Sbjct: 347 RQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVGSTSENITQRILYVDDMDKKSALLDLL 406
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + L LIFV++K A +L L + +A IH D +Q +
Sbjct: 407 SAEHKGL---TLIFVETKRMADQLTDFLIMQNFKATAIHGDRTQAE 449
>gi|323302724|gb|EGA56530.1| Dbp1p [Saccharomyces cerevisiae FostersB]
Length = 617
Score = 95.9 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 95/166 (57%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL + R K+ L+ ++YLVLDEAD++ ++G I +V+ C PS+
Sbjct: 288 CDLLVATPGRLNDLLERGKVSLANIKYLVLDEADRMLDMG-FEPQIRHIVEECDMPSVEN 346
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + + + + VGR + SE+I Q++++ + K LL L
Sbjct: 347 RQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVGSTSENITQRILYVDDMDKKSALLDLL 406
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + L LIFV++K A +L L + +A IH D +Q +
Sbjct: 407 SAEHKGL---TLIFVETKRMADQLTDFLIMQNFKATAIHGDRTQAE 449
>gi|226483435|emb|CAX74018.1| putative ATP-dependent RNA helicase DDX52 [Schistosoma japonicum]
Length = 606
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 106/206 (51%), Gaps = 43/206 (20%)
Query: 14 FSCDILISTPLRLR----LAIRRKKIDLSRVEYLVLDEADKLFEV-----------GNLL 58
S I++STP RL L + + I+LSR+ ++V+DE DK+ E+ GN
Sbjct: 218 ISTKIIVSTPNRLSNLLSLPLDKCPINLSRLSWIVVDECDKMLEINFNDIPSNSEPGNKT 277
Query: 59 KH--------IDPVVKACSNPSIVR--------SLFSATLPDFVEELARSIM-------- 94
+ + P+ KA N + V +LFSAT+PD V AR+ +
Sbjct: 278 NYRPRGFHNQLAPIFKAVQNINHVEQSNIRPAVALFSATVPDEVVSWARNQLPALLKADN 337
Query: 95 --HDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKDRAK 152
++ + + VG +N A +IKQ+L + +E+GKLL +R A L P LIF+QS+DRA
Sbjct: 338 SEYELIELRVGIRNAAVSTIKQELRYCATEQGKLLEMRYLLANGLAYPCLIFMQSRDRAN 397
Query: 153 ELYGELAFDD--IRAGVIHSDLSQTQ 176
E+ E+ D I A VI SD ++ Q
Sbjct: 398 EILKEILLSDTNILANVISSDKTEAQ 423
>gi|190407839|gb|EDV11104.1| ATP dependent RNA helicase [Saccharomyces cerevisiae RM11-1a]
Length = 617
Score = 95.9 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 95/166 (57%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL + R K+ L+ ++YLVLDEAD++ ++G I +V+ C PS+
Sbjct: 288 CDLLVATPGRLNDLLERGKVSLANIKYLVLDEADRMLDMG-FEPQIRHIVEECDMPSVEN 346
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + + + + VGR + SE+I Q++++ + K LL L
Sbjct: 347 RQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVGSTSENITQRILYVDDMDKKSALLDLL 406
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + L LIFV++K A +L L + +A IH D +Q +
Sbjct: 407 SAEHKGL---TLIFVETKRMADQLTDFLIMQNFKATAIHGDRTQAE 449
>gi|212531849|ref|XP_002146081.1| ATP dependent RNA helicase (Rok1), putative [Talaromyces marneffei
ATCC 18224]
gi|210071445|gb|EEA25534.1| ATP dependent RNA helicase (Rok1), putative [Talaromyces marneffei
ATCC 18224]
Length = 745
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 108/200 (54%), Gaps = 48/200 (24%)
Query: 16 CDILISTPLRLRLAIRRK----KIDLSRVEYLVLDEADKLFEVGNLLKHIDP-------- 63
DIL++TPL L A+ K K L V +LVLDEAD L +DP
Sbjct: 368 SDILVTTPLALVNALSVKDTEEKESLPSVRHLVLDEADVL---------LDPLFREQTLA 418
Query: 64 VVKACSNPSIVRSLFSATLPDFVEELARSIM---HDAV--------RVIVGRKNTASESI 112
+ +C+N ++ S +SAT+ +EEL +S + H+++ R+++G K++A +I
Sbjct: 419 IWNSCTNTNLGISFWSATMGSSIEELTKSTLESRHESLNAEKRPLLRLVIGLKDSAVPNI 478
Query: 113 KQKLVFAGSEEGKLLALRQSFAES---------LNPPVLIFVQSKDRAKELYGELAFD-D 162
+ KL++A +E+GKLL LRQ + L PP L+F Q+ RA L+ EL +D
Sbjct: 479 QHKLIYAATEQGKLLGLRQLLHPTAAIAPNEVRLRPPFLVFTQTITRAAALHSELLYDIP 538
Query: 163 IRAG------VIHSDLSQTQ 176
I AG V+HSDLS+T+
Sbjct: 539 IEAGGSSRIAVLHSDLSETR 558
>gi|3641|emb|CAA39465.1| DBP1 [Saccharomyces cerevisiae]
Length = 618
Score = 95.9 bits (237), Expect = 6e-18, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 95/166 (57%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL + R K+ L+ ++YLVLDEAD++ ++G I +V+ C PS+
Sbjct: 289 CDLLVATPGRLNDLLERGKVSLANIKYLVLDEADRMLDMG-FEPQIRHIVEECDMPSVEN 347
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + + + + VGR + SE+I Q++++ + K LL L
Sbjct: 348 RQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVGSTSENITQRILYVDDMDKKSALLDLL 407
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + L LIFV++K A +L L + +A IH D +Q +
Sbjct: 408 SAEHKGL---TLIFVETKRMADQLTDFLIMQNFKATAIHGDRTQAE 450
>gi|315043372|ref|XP_003171062.1| hypothetical protein MGYG_07060 [Arthroderma gypseum CBS 118893]
gi|311344851|gb|EFR04054.1| hypothetical protein MGYG_07060 [Arthroderma gypseum CBS 118893]
Length = 746
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 102/196 (52%), Gaps = 39/196 (19%)
Query: 16 CDILISTPLRLRLAIRRKKI----DLSRVEYLVLDEADKLFEV---GNLLKHIDPVVKAC 68
DIL++TPL+L A+ + V+ LVLDEAD L + LK + ++C
Sbjct: 368 SDILVTTPLQLVNALSDNGCKDIASMPLVQSLVLDEADVLLDPLFRDQTLK----IWQSC 423
Query: 69 SNPSIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASESIKQKL 116
NP + L+SAT+ +EELARS + D +R++VG K++A +I KL
Sbjct: 424 VNPQLRVGLWSATMGSNIEELARSTIGDRQKSLGLTEEPFLIRLVVGLKDSAIPNISHKL 483
Query: 117 VFAGSEEGKLLALRQ---------SFAESLNPPVLIFVQSKDRAKELYGELAFD------ 161
+A +E+GKLL LRQ S + L PP ++F Q+ RA L+ EL +D
Sbjct: 484 TYAATEQGKLLGLRQLLHPTTATASAGKHLRPPFIVFTQTIPRAVALHSELMYDIPPEAG 543
Query: 162 -DIRAGVIHSDLSQTQ 176
R V+HS+LS +Q
Sbjct: 544 GSSRIAVLHSELSDSQ 559
>gi|401837326|gb|EJT41269.1| DBP1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 619
Score = 95.5 bits (236), Expect = 7e-18, Method: Composition-based stats.
Identities = 58/166 (34%), Positives = 94/166 (56%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL + R KI L+ +YLVLDEAD++ ++G I +V+ C PS+
Sbjct: 288 CDLLVATPGRLNDLLERGKISLANTKYLVLDEADRMLDMG-FEPQIRHIVEECDMPSVGN 346
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + + + + VGR + SE+I Q++++ + K LL L
Sbjct: 347 RQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVGSTSENITQRILYVDDMDKKSALLDLL 406
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + L LIFV++K A +L L + +A IH D +Q +
Sbjct: 407 SAEHKGL---TLIFVETKRMADQLTDFLIMQNFKATAIHGDRTQAE 449
>gi|365758019|gb|EHM99884.1| Dbp1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 619
Score = 95.5 bits (236), Expect = 7e-18, Method: Composition-based stats.
Identities = 58/166 (34%), Positives = 94/166 (56%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL + R KI L+ +YLVLDEAD++ ++G I +V+ C PS+
Sbjct: 288 CDLLVATPGRLNDLLERGKISLANTKYLVLDEADRMLDMG-FEPQIRHIVEECDMPSVGN 346
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + + + + VGR + SE+I Q++++ + K LL L
Sbjct: 347 RQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVGSTSENITQRILYVDDMDKKSALLDLL 406
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + L LIFV++K A +L L + +A IH D +Q +
Sbjct: 407 SAEHKGL---TLIFVETKRMADQLTDFLIMQNFKATAIHGDRTQAE 449
>gi|226295091|gb|EEH50511.1| ATP-dependent RNA helicase ROK1 [Paracoccidioides brasiliensis
Pb18]
Length = 821
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/207 (37%), Positives = 112/207 (54%), Gaps = 34/207 (16%)
Query: 2 KKELVRSTDLSKFSCDILISTPLRLRLAIR-RKKIDLS---RVEYLVLDEADKLFEVGNL 57
K + R DL S DIL+STP L ++ KK DL+ V+ L LDEAD L +
Sbjct: 428 KAKQSRGNDLITNS-DILVSTPPLLANSLSGNKKRDLAPLPTVQSLALDEADVLLDPLFR 486
Query: 58 LKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRK 105
+ +D V +AC+N + L+SAT+ +EEL +S + + VR++VG K
Sbjct: 487 EQTLD-VWRACTNAQLRVGLWSATMGSNIEELVKSTISERQKSLGLGDESFLVRLVVGLK 545
Query: 106 NTASESIKQKLVFAGSEEGKLLALRQ------SFAES---LNPPVLIFVQSKDRAKELYG 156
+TA +I KLV+A +E+GKLL LRQ +F+ S L PP L+F Q+ RA L+
Sbjct: 546 DTAIPNISHKLVYAATEQGKLLGLRQLLHPTGAFSASDIHLRPPFLVFTQTISRAVALHS 605
Query: 157 ELAFD-------DIRAGVIHSDLSQTQ 176
EL +D R V+HS+LS +Q
Sbjct: 606 ELKYDIPAEAGGSSRIAVLHSELSDSQ 632
>gi|66475700|ref|XP_627666.1| Rok1p, eIF4A-1-family RNA SFII helicase [Cryptosporidium parvum
Iowa II]
gi|32398898|emb|CAD98363.1| dead box RNA helicase, possible [Cryptosporidium parvum]
gi|46229099|gb|EAK89948.1| Rok1p, eIF4A-1-family RNA SFII helicase [Cryptosporidium parvum
Iowa II]
gi|323508863|dbj|BAJ77324.1| cgd6_3210 [Cryptosporidium parvum]
Length = 480
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 91/164 (55%), Gaps = 5/164 (3%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS---I 73
DI +STP RL R I+L +VLDE DKL ++G ID ++ + P +
Sbjct: 209 DIAVSTPYRLADICRNNIINLQGCSMIVLDEVDKLLDMG-FAPQIDEILSHSNIPKGGKV 267
Query: 74 VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 133
+ FSATLP V LA SIM V+V +G + AS +I Q+LV ++ K+ +LRQ
Sbjct: 268 QIAAFSATLPQIVINLADSIMKSPVKVTLGHRLAASSTIIQELVCVTKDDAKIESLRQLI 327
Query: 134 AES-LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + P L+F SKD A+ L+ +L +D++ IHSD+ + +
Sbjct: 328 KQGKIMLPTLVFTNSKDDAQRLFKKLMYDNLIVEAIHSDMPKVK 371
>gi|303318078|ref|XP_003069041.1| ATP-dependent RNA helicase ROK1, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240108722|gb|EER26896.1| ATP-dependent RNA helicase ROK1, putative [Coccidioides posadasii
C735 delta SOWgp]
Length = 729
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 109/212 (51%), Gaps = 48/212 (22%)
Query: 4 ELVRSTDLSKFSCDILISTPLRLRLAI----RRKKIDLSRVEYLVLDEADKLFEVGNLLK 59
E +S D+ DIL+ TPL L A+ +R L V+ LVLDEAD L
Sbjct: 343 EGEKSKDIPLTKSDILVCTPLVLANALSDGGKRDVAPLPSVQKLVLDEADVL-------- 394
Query: 60 HIDP--------VVKACSNPSIVRSLFSATLPDFVEELARSIMHDA------------VR 99
+DP + +AC++P + L+SAT+ +EEL +S + + +R
Sbjct: 395 -LDPLFREQTLSIWRACTHPQLRVGLWSATMGSNIEELTKSTIKERQGLLGLKDESSLIR 453
Query: 100 VIVGRKNTASESIKQKLVFAGSEEGKLLALRQ-----SFAES---LNPPVLIFVQSKDRA 151
++VG K+TA +I KLV+A +E+GKLL LRQ S + S L PP LIF Q+ RA
Sbjct: 454 LVVGLKDTAIPNISHKLVYAATEQGKLLGLRQLLHPTSTSRSTTHLRPPFLIFTQTIARA 513
Query: 152 KELYGELAFD-------DIRAGVIHSDLSQTQ 176
L+ EL +D R V+HS+LS ++
Sbjct: 514 IALHSELMYDIPAEAGGSSRIAVLHSELSDSK 545
>gi|320036789|gb|EFW18727.1| ATP-dependent RNA helicase rok1 [Coccidioides posadasii str.
Silveira]
Length = 730
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 109/212 (51%), Gaps = 48/212 (22%)
Query: 4 ELVRSTDLSKFSCDILISTPLRLRLAI----RRKKIDLSRVEYLVLDEADKLFEVGNLLK 59
E +S D+ DIL+ TPL L A+ +R L V+ LVLDEAD L
Sbjct: 343 EGEKSKDIPLTKSDILVCTPLVLANALSDGGKRDVAPLPSVQKLVLDEADVL-------- 394
Query: 60 HIDP--------VVKACSNPSIVRSLFSATLPDFVEELARSIMHDA------------VR 99
+DP + +AC++P + L+SAT+ +EEL +S + + +R
Sbjct: 395 -LDPLFREQTLSIWRACTHPQLRVGLWSATMGSNIEELTKSTIKERQGLLGLKDESSLIR 453
Query: 100 VIVGRKNTASESIKQKLVFAGSEEGKLLALRQ-----SFAES---LNPPVLIFVQSKDRA 151
++VG K+TA +I KLV+A +E+GKLL LRQ S + S L PP LIF Q+ RA
Sbjct: 454 LVVGLKDTAIPNISHKLVYAATEQGKLLGLRQLLHPTSTSRSTTHLRPPFLIFTQTIARA 513
Query: 152 KELYGELAFD-------DIRAGVIHSDLSQTQ 176
L+ EL +D R V+HS+LS ++
Sbjct: 514 IALHSELMYDIPAEAGGSSRIAVLHSELSDSK 545
>gi|255726050|ref|XP_002547951.1| ATP-dependent RNA helicase ded1 [Candida tropicalis MYA-3404]
gi|240133875|gb|EER33430.1| ATP-dependent RNA helicase ded1 [Candida tropicalis MYA-3404]
Length = 665
Score = 95.5 bits (236), Expect = 8e-18, Method: Composition-based stats.
Identities = 57/164 (34%), Positives = 92/164 (56%), Gaps = 5/164 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL+ + R K+ L+ ++YLVLDEAD++ ++G I +V+ C P +
Sbjct: 320 CDLLVATPGRLKDLLERGKVSLANIKYLVLDEADRMLDMG-FEPQIRHIVEECDMPEVTD 378
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + D V + VGR + SE+I QK+++ E+ K + L
Sbjct: 379 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKILYVEDEDKKSVIL-DL 437
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
A + N ++F ++K A +L L A IH D SQ +
Sbjct: 438 LAANENGLTIVFTETKRMADQLADFLYDQGFPATAIHGDRSQYE 481
>gi|225677741|gb|EEH16025.1| ATP-dependent RNA helicase rok1 [Paracoccidioides brasiliensis
Pb03]
Length = 754
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/207 (37%), Positives = 112/207 (54%), Gaps = 34/207 (16%)
Query: 2 KKELVRSTDLSKFSCDILISTPLRLRLAIR-RKKIDLS---RVEYLVLDEADKLFEVGNL 57
K + R DL S DIL+STP L ++ KK DL+ V+ L LDEAD L +
Sbjct: 361 KAKQSRGNDLITNS-DILVSTPPLLANSLSGNKKRDLAPLPTVQSLALDEADVLLDPLFR 419
Query: 58 LKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRK 105
+ +D V +AC+N + L+SAT+ +EEL +S + + VR++VG K
Sbjct: 420 EQTLD-VWRACTNAQLRVGLWSATMGSNIEELVKSTISERQKSLGLGDESFLVRLVVGLK 478
Query: 106 NTASESIKQKLVFAGSEEGKLLALRQ------SFAES---LNPPVLIFVQSKDRAKELYG 156
+TA +I KLV+A +E+GKLL LRQ +F+ S L PP L+F Q+ RA L+
Sbjct: 479 DTAIPNISHKLVYAATEQGKLLGLRQLLHPTGAFSASDIHLRPPFLVFTQTISRAVALHS 538
Query: 157 ELAFD-------DIRAGVIHSDLSQTQ 176
EL +D R V+HS+LS +Q
Sbjct: 539 ELKYDIPAEAGGSSRIAVLHSELSDSQ 565
>gi|363756356|ref|XP_003648394.1| hypothetical protein Ecym_8298 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891594|gb|AET41577.1| Hypothetical protein Ecym_8298 [Eremothecium cymbalariae
DBVPG#7215]
Length = 638
Score = 95.1 bits (235), Expect = 9e-18, Method: Composition-based stats.
Identities = 58/164 (35%), Positives = 89/164 (54%), Gaps = 5/164 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD++++TP RL + R KI L V+YLVLDEAD++ ++G I +V+ C PS+
Sbjct: 289 CDLIVATPGRLNDLLERGKISLCNVKYLVLDEADRMLDMG-FEPQIRHIVEGCDMPSVEN 347
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LA + D + + VGR + SE+I QK+++ + K L
Sbjct: 348 RQTLMFSATFPTDIQHLAADFLKDYIFLSVGRVGSTSENITQKVLYV-EDLDKRSVLLDL 406
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
A S L+FV++K A L L ++ A IH D SQ +
Sbjct: 407 LAASDGGLTLVFVETKRMADALTDFLIMQNLSATAIHGDRSQAE 450
>gi|67619527|ref|XP_667652.1| dead box RNA helicase [Cryptosporidium hominis TU502]
gi|54658801|gb|EAL37417.1| dead box RNA helicase [Cryptosporidium hominis]
Length = 480
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 91/164 (55%), Gaps = 5/164 (3%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS---I 73
DI +STP RL R I+L +VLDE DKL ++G ID ++ + P +
Sbjct: 209 DIAVSTPYRLADICRNNIINLQGCSMIVLDEVDKLLDMG-FAPQIDEILSHSNIPKGGKV 267
Query: 74 VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 133
+ FSATLP V LA SIM V+V +G + AS +I Q+LV ++ K+ +LRQ
Sbjct: 268 QIAAFSATLPQIVINLADSIMKSPVKVTLGHRLAASSTIIQELVCVTKDDAKIESLRQLI 327
Query: 134 AES-LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + P L+F SKD A+ L+ +L +D++ IHSD+ + +
Sbjct: 328 KQGKIMLPTLVFTNSKDDAQRLFKKLMYDNLIVEAIHSDMPKVK 371
>gi|121700767|ref|XP_001268648.1| ATP dependent RNA helicase (Rok1), putative [Aspergillus clavatus
NRRL 1]
gi|143458991|sp|A1CNK1.1|ROK1_ASPCL RecName: Full=ATP-dependent RNA helicase rok1
gi|119396791|gb|EAW07222.1| ATP dependent RNA helicase (Rok1), putative [Aspergillus clavatus
NRRL 1]
Length = 738
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 104/200 (52%), Gaps = 48/200 (24%)
Query: 16 CDILISTPLRLRLAIRRKKID----LSRVEYLVLDEADKLFEVGNLLKHIDP-------- 63
DIL++TPL+L A+ + L V +VLDEAD L +DP
Sbjct: 360 SDILVTTPLQLVNALSTNQTKPMATLPLVRNIVLDEADVL---------LDPLFRDQTLN 410
Query: 64 VVKACSNPSIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASES 111
+ +AC++P + SL+SAT+ VE+LA+S + + +R++VG K++A +
Sbjct: 411 IWRACTHPELRASLWSATMGSNVEDLAKSTIKERKEAVNQTKSYPLLRLVVGLKDSAIPN 470
Query: 112 IKQKLVFAGSEEGKLLALRQSFAES--------LNPPVLIFVQSKDRAKELYGELAFD-- 161
I+ KL++A +E+GKLL LRQ + L PP LIF Q+ RA L+ EL +D
Sbjct: 471 IEHKLIYAATEQGKLLGLRQLLHPTAASASDVRLRPPFLIFTQTIPRAVALHSELRYDIP 530
Query: 162 -----DIRAGVIHSDLSQTQ 176
R V+HSDLS Q
Sbjct: 531 TEAGGSSRIAVLHSDLSDGQ 550
>gi|159131729|gb|EDP56842.1| ATP dependent RNA helicase (Rok1), putative [Aspergillus fumigatus
A1163]
Length = 739
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 105/192 (54%), Gaps = 32/192 (16%)
Query: 16 CDILISTPLRL--RLAIRRKK--IDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP 71
DIL++TPL L L+ R K L V +VLDEAD L + + +D + +AC++P
Sbjct: 362 SDILVTTPLLLVNALSANRTKPMATLPLVRNIVLDEADVLLDELFREQTLD-IWRACTHP 420
Query: 72 SIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASESIKQKLVFA 119
+ SL+SAT+ +E+LA+S + + +R++VG K++A +I+ KLV+A
Sbjct: 421 ELRASLWSATMGSNIEDLAKSTIKERKQAYDQTKSYPLLRLVVGLKDSAIPNIEHKLVYA 480
Query: 120 GSEEGKLLALRQSFAES--------LNPPVLIFVQSKDRAKELYGELAFD-------DIR 164
+E+GKLL LRQ + L PP LIF Q+ RA L+ EL +D R
Sbjct: 481 ATEQGKLLGLRQLLHPAAASVSDVRLRPPFLIFTQTIPRAIALHSELRYDIPAEAGGSSR 540
Query: 165 AGVIHSDLSQTQ 176
V+HSDLS Q
Sbjct: 541 IAVLHSDLSDGQ 552
>gi|70996480|ref|XP_752995.1| ATP dependent RNA helicase (Rok1) [Aspergillus fumigatus Af293]
gi|74672120|sp|Q4WRH5.1|ROK1_ASPFU RecName: Full=ATP-dependent RNA helicase rok1
gi|66850630|gb|EAL90957.1| ATP dependent RNA helicase (Rok1), putative [Aspergillus fumigatus
Af293]
Length = 739
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 105/192 (54%), Gaps = 32/192 (16%)
Query: 16 CDILISTPLRL--RLAIRRKK--IDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP 71
DIL++TPL L L+ R K L V +VLDEAD L + + +D + +AC++P
Sbjct: 362 SDILVTTPLLLVNALSANRTKPMATLPLVRNIVLDEADVLLDELFREQTLD-IWRACTHP 420
Query: 72 SIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASESIKQKLVFA 119
+ SL+SAT+ +E+LA+S + + +R++VG K++A +I+ KLV+A
Sbjct: 421 ELRASLWSATMGSNIEDLAKSTIKERKQAYDQTKSYPLLRLVVGLKDSAIPNIEHKLVYA 480
Query: 120 GSEEGKLLALRQSFAES--------LNPPVLIFVQSKDRAKELYGELAFD-------DIR 164
+E+GKLL LRQ + L PP LIF Q+ RA L+ EL +D R
Sbjct: 481 ATEQGKLLGLRQLLHPAAASVSDVRLRPPFLIFTQTIPRAIALHSELRYDIPAEAGGSSR 540
Query: 165 AGVIHSDLSQTQ 176
V+HSDLS Q
Sbjct: 541 IAVLHSDLSDGQ 552
>gi|119186019|ref|XP_001243616.1| hypothetical protein CIMG_03057 [Coccidioides immitis RS]
gi|118574937|sp|Q1E306.1|ROK1_COCIM RecName: Full=ATP-dependent RNA helicase ROK1
gi|392870324|gb|EAS32118.2| ATP-dependent RNA helicase ROK1 [Coccidioides immitis RS]
Length = 730
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 107/212 (50%), Gaps = 48/212 (22%)
Query: 4 ELVRSTDLSKFSCDILISTPLRLRLAI----RRKKIDLSRVEYLVLDEADKLFEVGNLLK 59
E +S D+ DIL+ TPL L A+ +R L V+ LVLDEAD L
Sbjct: 343 EGEKSKDIPLTKSDILVCTPLVLANALSDGGKRDVAPLPSVQKLVLDEADVL-------- 394
Query: 60 HIDP--------VVKACSNPSIVRSLFSATLPDFVEELARSIMHDA------------VR 99
+DP + +AC++P + L+SAT+ +EEL +S + + +R
Sbjct: 395 -LDPLFREQTLSIWRACTHPQLRVGLWSATMGSNIEELTKSTIKERQELLGLKDESSLIR 453
Query: 100 VIVGRKNTASESIKQKLVFAGSEEGKLLALRQ--------SFAESLNPPVLIFVQSKDRA 151
++VG K+TA +I KLV+A +E+GKLL LRQ S L PP LIF Q+ RA
Sbjct: 454 LVVGLKDTAIPNISHKLVYAATEQGKLLGLRQLLHPTSTSSSTTHLRPPFLIFTQTIARA 513
Query: 152 KELYGELAFD-------DIRAGVIHSDLSQTQ 176
L+ EL +D R V+HS+LS ++
Sbjct: 514 IALHSELMYDIPAEAGGSSRIAVLHSELSDSK 545
>gi|360044575|emb|CCD82123.1| putative dead box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 607
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 106/206 (51%), Gaps = 44/206 (21%)
Query: 15 SCDILISTPLRLR----LAIRRKKIDLSRVEYLVLDEADKLFEV------------GNLL 58
S ILISTP RL L IDLSR+ +LV+DE DK+ EV GN
Sbjct: 220 STKILISTPSRLSTLLSLPSEHCPIDLSRLSWLVVDECDKMLEVNFNDISFSNTEHGNKT 279
Query: 59 KH--------IDPVVK-----ACSNPSIVR---SLFSATLPDFVEELARSIM-------- 94
K+ + P+ + + SI R +LFSAT+PD V AR+ +
Sbjct: 280 KYRPRGFHNQVAPIFEFIQKVNLTGQSIRRPLVALFSATVPDEVVSWARNQLPVLLKLDS 339
Query: 95 --HDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKDRAK 152
++ +++ VG +N A ++KQ+L + +E+GKLL +R A L P LIF+QS+DRA
Sbjct: 340 SEYELIQLRVGIRNAAVSTVKQELRYCATEQGKLLEMRYLLANGLAYPCLIFMQSRDRAN 399
Query: 153 ELYGELAFD--DIRAGVIHSDLSQTQ 176
E+ E+ DI A VI SD ++ Q
Sbjct: 400 EILKEILLSDADILANVISSDKTEAQ 425
>gi|399216152|emb|CCF72840.1| unnamed protein product [Babesia microti strain RI]
Length = 561
Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 59/169 (34%), Positives = 98/169 (57%), Gaps = 7/169 (4%)
Query: 10 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
DL K CD+ ++TP RL + R+K++ + V+YLVLDEAD++ ++G I +V+
Sbjct: 250 DLEK-GCDVCVATPGRLTDLVERRKVNFTSVKYLVLDEADRMLDMG-FSPQIRAIVEDNG 307
Query: 70 NPSIVRS----LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK 125
P+ + +FSAT P ++ LA+ + D + + VGR + +E I+Q++ +AG ++ K
Sbjct: 308 MPTSMEGRQTVMFSATFPREIQILAKDFLRDYIYLTVGRVGSTNEFIRQRVQYAGQDQ-K 366
Query: 126 LLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
L + E+ N VLIFV++K RA + L ++ A IH D SQ
Sbjct: 367 AKYLVKLLNENSNGLVLIFVETKRRADMIEAYLLNENFLAVSIHGDRSQ 415
>gi|119494475|ref|XP_001264133.1| ATP dependent RNA helicase (Rok1), putative [Neosartorya fischeri
NRRL 181]
gi|143459065|sp|A1D1E3.1|ROK1_NEOFI RecName: Full=ATP-dependent RNA helicase rok1
gi|119412295|gb|EAW22236.1| ATP dependent RNA helicase (Rok1), putative [Neosartorya fischeri
NRRL 181]
Length = 738
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 105/192 (54%), Gaps = 32/192 (16%)
Query: 16 CDILISTPLRL--RLAIRRKK--IDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP 71
DIL++TPL L L+ R K L V +VLDEAD L + + +D + +AC++P
Sbjct: 361 SDILVTTPLLLVNALSANRTKPMATLPLVRNIVLDEADVLLDELFRDQTLD-IWRACTHP 419
Query: 72 SIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASESIKQKLVFA 119
+ SL+SAT+ +E+LA+S + + +R++VG K++A +I+ KLV+A
Sbjct: 420 ELRASLWSATMGSNIEDLAKSTIKERKQAYDRTNSYPLLRLVVGLKDSAIPNIEHKLVYA 479
Query: 120 GSEEGKLLALRQSFAES--------LNPPVLIFVQSKDRAKELYGELAFD-------DIR 164
+E+GKLL LRQ + L PP LIF Q+ RA L+ EL +D R
Sbjct: 480 ATEQGKLLGLRQLLHPAAASASDVRLRPPFLIFTQTIPRAIALHSELRYDIPAEAGGSSR 539
Query: 165 AGVIHSDLSQTQ 176
V+HSDLS Q
Sbjct: 540 IAVLHSDLSDGQ 551
>gi|256079519|ref|XP_002576034.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 607
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 105/208 (50%), Gaps = 48/208 (23%)
Query: 15 SCDILISTPLRLR----LAIRRKKIDLSRVEYLVLDEADKLFEV------------GNLL 58
S ILISTP RL L IDLSR+ +LV+DE DK+ EV GN
Sbjct: 220 STKILISTPSRLSTLLSLPSEHCPIDLSRLSWLVVDECDKMLEVNFNDISFSNTEHGNKT 279
Query: 59 KH--------IDPVV----------KACSNPSIVRSLFSATLPDFVEELARSIM------ 94
K+ + P+ ++ PS+ +LFSAT+PD V AR+ +
Sbjct: 280 KYRPRGFHNQVAPIFEFIQKVNLTGQSIRRPSV--ALFSATVPDEVVSWARNQLPVLLKL 337
Query: 95 ----HDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKDR 150
++ ++ VG +N A ++KQ+L + +E+GKLL +R A L P LIF+QS+DR
Sbjct: 338 DSSEYELTQLRVGIRNAAVSTVKQELRYCATEQGKLLEMRYLLANGLAYPCLIFMQSRDR 397
Query: 151 AKELYGELAFD--DIRAGVIHSDLSQTQ 176
A E+ E+ DI A VI SD ++ Q
Sbjct: 398 ANEILKEILLSDADILANVISSDKTEAQ 425
>gi|154282411|ref|XP_001542001.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150410181|gb|EDN05569.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 433
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 105/194 (54%), Gaps = 35/194 (18%)
Query: 16 CDILISTPLRLRLAIRRKK----IDLSRVEYLVLDEADKLFEVGNLLK-HIDPVVKACSN 70
DIL+STPL L ++ K L ++ LVLDEAD L + +L + V +AC+N
Sbjct: 52 SDILVSTPLLLANSLSGNKSRSIAPLPTIQSLVLDEADVLLD--SLFRDQTLEVWRACTN 109
Query: 71 PSIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASESIKQKLVF 118
+ L+SAT+ +EELA S +++ VR++VG K+TA +I KLV+
Sbjct: 110 ARLRVGLWSATMGSSIEELAMSTINEQRRSLGLRDESFLVRLVVGLKDTAIPNISHKLVY 169
Query: 119 AGSEEGKLLALRQ--------SFAES-LNPPVLIFVQSKDRAKELYGELAFD-------D 162
A +E+GKLL LRQ S +++ L P L+F Q+ RA L+ EL +D
Sbjct: 170 AATEQGKLLGLRQLLNPKGASSTSDTHLRAPFLVFTQTISRAVALHSELKYDIPAEAGGS 229
Query: 163 IRAGVIHSDLSQTQ 176
R V+HSDLS +Q
Sbjct: 230 SRIAVLHSDLSDSQ 243
>gi|143459043|sp|Q0CMB0.2|ROK1_ASPTN RecName: Full=ATP-dependent RNA helicase rok1
Length = 749
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 106/192 (55%), Gaps = 32/192 (16%)
Query: 16 CDILISTPLRL--RLAIRRKK--IDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP 71
DIL++TPL L L+ R K L V +VLDEAD L + + +D + ++C++P
Sbjct: 370 SDILVTTPLLLVNALSANRTKPLAALPLVRNIVLDEADVLLDPLFREQTLD-IWRSCTHP 428
Query: 72 SIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASESIKQKLVFA 119
+ SL+SAT+ VE+LA+S + + +R++VG K++A +I+ KLV+A
Sbjct: 429 ELRASLWSATMGSNVEDLAKSTIQERKDLSGTTKSYPLIRLVVGLKDSAIPNIQHKLVYA 488
Query: 120 GSEEGKLLALRQSFAES--------LNPPVLIFVQSKDRAKELYGELAFD-------DIR 164
+E+GKLL LRQ + L PP LIF Q+ RA L+ EL +D R
Sbjct: 489 ATEQGKLLGLRQLLHPTARTATDVHLRPPFLIFTQTIPRAVALHSELLYDIPPEAGGSSR 548
Query: 165 AGVIHSDLSQTQ 176
V+HS+LS +Q
Sbjct: 549 IAVLHSELSDSQ 560
>gi|255957063|ref|XP_002569284.1| Pc21g23170 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590995|emb|CAP97214.1| Pc21g23170 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 719
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 101/194 (52%), Gaps = 34/194 (17%)
Query: 16 CDILISTPLRLRLAIRRKKID----LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP 71
DIL++TPL L A+ + L V LV+DEAD L + + +D + KACS+P
Sbjct: 337 SDILVTTPLMLVNALSANRTTTMATLPLVRSLVMDEADVLLDPLFREQTLD-IWKACSHP 395
Query: 72 SIVRSLFSATLPDFVEELARSIM--------------HDAVRVIVGRKNTASESIKQKLV 117
+ L+SAT+ +E+L +S + H +R++VG K++A +I KLV
Sbjct: 396 DLRVGLWSATMGSNIEDLTKSTIKERLEDLGQKPSEPHALLRLVVGLKDSAIPNIDHKLV 455
Query: 118 FAGSEEGKLLALRQSFAES--------LNPPVLIFVQSKDRAKELYGELAFD-------D 162
+A +E+GKL+ LRQ + L PP LIF Q+ RA L+ EL +D
Sbjct: 456 YAATEQGKLMGLRQLLRPAAASASDIRLRPPFLIFTQTIPRAVALHSELKYDIPAEAGGS 515
Query: 163 IRAGVIHSDLSQTQ 176
R V+HSDLS Q
Sbjct: 516 SRIAVLHSDLSDGQ 529
>gi|328855503|gb|EGG04629.1| hypothetical protein MELLADRAFT_88697 [Melampsora larici-populina
98AG31]
Length = 680
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 91/163 (55%), Gaps = 19/163 (11%)
Query: 11 LSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN 70
L CD+LISTPL+L IR LS + +LVLDE D+L + + L+ +D +++
Sbjct: 330 LPSTGCDVLISTPLKLLYHIRDSPESLSHITHLVLDEVDQLLDKSSFLEQVDQILEILKQ 389
Query: 71 PS--------IVRSLFSATLPDFVEELARSIMHDA--VRVIVGRKNTASESIKQKLVFAG 120
+ + + + SAT+ VEEL++S+M A VR+++G+K+ A +KQ+L +
Sbjct: 390 ATTTNQETKVVQKVMMSATISSEVEELSKSVMSSARFVRLLIGQKHAAPNKVKQRLDYVD 449
Query: 121 SEEGKL----LALRQ-----SFAESLNPPVLIFVQSKDRAKEL 154
SE KL LR S E L PPVLIF QS +R +EL
Sbjct: 450 SEASKLSHFVTLLRNNNNTLSKVEKLCPPVLIFCQSAERVEEL 492
>gi|68478729|ref|XP_716633.1| hypothetical protein CaO19.7392 [Candida albicans SC5314]
gi|74656359|sp|Q5A4E2.1|DED1_CANAL RecName: Full=ATP-dependent RNA helicase DED1
gi|46438305|gb|EAK97638.1| hypothetical protein CaO19.7392 [Candida albicans SC5314]
gi|238881007|gb|EEQ44645.1| ATP-dependent RNA helicase ded1 [Candida albicans WO-1]
Length = 672
Score = 94.0 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 56/164 (34%), Positives = 91/164 (55%), Gaps = 5/164 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL+ + R K+ L+ + YLVLDEAD++ ++G I +V+ C P++
Sbjct: 320 CDLLVATPGRLKDLLDRGKVSLANIRYLVLDEADRMLDMG-FEPQIRYIVEECDMPAVKD 378
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + D V + VGR + SE+I QK+++ +E K + L
Sbjct: 379 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKILYVEDDEKKSVIL-DL 437
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + N ++F ++K A L L A IH D SQ +
Sbjct: 438 LSANENGLTIVFTETKRMADNLADYLYDQGFPATAIHGDRSQYE 481
>gi|320166583|gb|EFW43482.1| DEAD box ATP-dependent RNA helicase [Capsaspora owczarzaki ATCC
30864]
Length = 534
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 67/87 (77%), Gaps = 1/87 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
D+L++TP+RL +R+ ++ L+ VE+L+ DEAD LF +G L+ +D ++ ACSNP+I R+
Sbjct: 447 DVLVTTPMRLVNILRQVELSLASVEWLICDEADNLFGMG-FLEQVDEILAACSNPNITRA 505
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVG 103
LFSAT+P VEE+AR++++ +RV +G
Sbjct: 506 LFSATMPSGVEEVARTLLNQPLRVGIG 532
>gi|134055621|emb|CAK37267.1| unnamed protein product [Aspergillus niger]
Length = 697
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 107/192 (55%), Gaps = 32/192 (16%)
Query: 16 CDILISTPLRL--RLAIRRKK--IDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP 71
DIL++TPL L L+ R K L V +VLDEAD L + + +D + ++C++P
Sbjct: 322 SDILVTTPLLLVNALSANRTKPLATLPLVRNVVLDEADVLLDPLFRDQTLD-IWRSCTHP 380
Query: 72 SIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASESIKQKLVFA 119
+ SL+SAT+ VE+LA+S + + +R++VG K++A +IK KLV+A
Sbjct: 381 ELRASLWSATMGSNVEDLAKSTIKERKDTLSETKSYPLLRLVVGLKDSAIPNIKHKLVYA 440
Query: 120 GSEEGKLLALRQ----SFAES----LNPPVLIFVQSKDRAKELYGELAFD-------DIR 164
+E+GKLL LRQ + A S L PP LIF Q+ RA L+ EL +D R
Sbjct: 441 ATEQGKLLGLRQLLHPAAASSTDIRLRPPFLIFTQTIPRAVALHSELRYDIPPEAGGSSR 500
Query: 165 AGVIHSDLSQTQ 176
V+HS+LS Q
Sbjct: 501 IAVLHSELSDGQ 512
>gi|358058712|dbj|GAA95675.1| hypothetical protein E5Q_02332 [Mixia osmundae IAM 14324]
Length = 693
Score = 94.0 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 59/164 (35%), Positives = 91/164 (55%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L +TP RL I R +I L+ ++YLVLDEAD++ ++G I +V+ P ++
Sbjct: 299 CDLLSATPGRLVDLIERGRISLANIQYLVLDEADRMLDMG-FEPQIRRIVEKEDMPGVMD 357
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LA+ + D V + VGR + SE+I QK+ + E+ + + L
Sbjct: 358 RQTLMFSATFPREIQYLAKDFLKDYVFLSVGRVGSTSENITQKVEYVEDEDKRSMLLDVL 417
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+A LIFV++K A L G L + I A IH D SQ +
Sbjct: 418 YAIPPGGLTLIFVETKRMADMLEGFLRQNQIEATSIHGDRSQRE 461
>gi|223590230|sp|A5DQS0.3|DED1_PICGU RecName: Full=ATP-dependent RNA helicase DED1
Length = 637
Score = 94.0 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 56/164 (34%), Positives = 91/164 (55%), Gaps = 5/164 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL+ + R ++ LS ++YLVLDEAD++ ++G I +V+ C P +
Sbjct: 303 CDLLVATPGRLKDLLERGRVSLSNIKYLVLDEADRMLDMG-FEPQIRHIVQECDMPGVES 361
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + D + + VGR + SE+I QK+++ +E K + L
Sbjct: 362 RQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGSTSENITQKVLYVEDDEKKSVLL-DL 420
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + N +IF ++K A L L A IH D SQ +
Sbjct: 421 LSANDNGLTIIFTETKRMADNLADFLYDQGFPATAIHGDRSQYE 464
>gi|320583085|gb|EFW97301.1| ATP-dependent RNA helicase DED1 [Ogataea parapolymorpha DL-1]
Length = 2471
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 100/179 (55%), Gaps = 7/179 (3%)
Query: 4 ELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDP 63
E+ D K CD+L++TP RL + R KI L ++YLVLDEAD++ ++G ++ I
Sbjct: 257 EVYLQMDQLKQGCDLLVATPGRLNDLLERGKISLKNIKYLVLDEADRMLDMGFEIQ-IRH 315
Query: 64 VVKACSNPSIVRS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAG 120
+++ C P +FSAT P ++ +A+ +H+ + + VGR + SE+I Q++++
Sbjct: 316 IIQGCDMPPPGERQTLMFSATFPKEIQLMAKDFLHNYIFLSVGRVGSTSENITQRILYVE 375
Query: 121 SEEGK--LLALRQSFAESL-NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+E K LL + S ++L N LIFV++K A L L D A IH D SQ +
Sbjct: 376 DDEKKSSLLDILTSTEDTLANGLTLIFVETKKMADILSDFLINQDFPATSIHGDRSQYE 434
>gi|317025646|ref|XP_001389504.2| ATP-dependent RNA helicase rok1 [Aspergillus niger CBS 513.88]
gi|143459016|sp|A2QAB5.2|ROK1_ASPNC RecName: Full=ATP-dependent RNA helicase rok1
Length = 729
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 107/192 (55%), Gaps = 32/192 (16%)
Query: 16 CDILISTPLRL--RLAIRRKK--IDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP 71
DIL++TPL L L+ R K L V +VLDEAD L + + +D + ++C++P
Sbjct: 354 SDILVTTPLLLVNALSANRTKPLATLPLVRNVVLDEADVLLDPLFRDQTLD-IWRSCTHP 412
Query: 72 SIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASESIKQKLVFA 119
+ SL+SAT+ VE+LA+S + + +R++VG K++A +IK KLV+A
Sbjct: 413 ELRASLWSATMGSNVEDLAKSTIKERKDTLSETKSYPLLRLVVGLKDSAIPNIKHKLVYA 472
Query: 120 GSEEGKLLALRQ----SFAES----LNPPVLIFVQSKDRAKELYGELAFD-------DIR 164
+E+GKLL LRQ + A S L PP LIF Q+ RA L+ EL +D R
Sbjct: 473 ATEQGKLLGLRQLLHPAAASSTDIRLRPPFLIFTQTIPRAVALHSELRYDIPPEAGGSSR 532
Query: 165 AGVIHSDLSQTQ 176
V+HS+LS Q
Sbjct: 533 IAVLHSELSDGQ 544
>gi|149240601|ref|XP_001526175.1| ATP-dependent RNA helicase ded1 [Lodderomyces elongisporus NRRL
YB-4239]
gi|152013500|sp|A5DZE6.1|DED1_LODEL RecName: Full=ATP-dependent RNA helicase DED1
gi|146450298|gb|EDK44554.1| ATP-dependent RNA helicase ded1 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 664
Score = 93.6 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 93/166 (56%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL+ + R ++ L+ ++YLVLDEAD++ ++G I +V+ C P +
Sbjct: 309 CDLLVATPGRLKDLLERGRVSLANIKYLVLDEADRMLDMG-FEPQIRHIVQECDMPDVQD 367
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + D + + VGR + SE+I QK+++ EE K +L L
Sbjct: 368 RQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGSTSENITQKVLYVEDEEKKSVILDLL 427
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ +E L ++F ++K A L L A IH D SQ +
Sbjct: 428 NANSEGL---TIVFTETKRMADNLADFLYDQGFPATAIHGDRSQYE 470
>gi|190348962|gb|EDK41523.2| hypothetical protein PGUG_05621 [Meyerozyma guilliermondii ATCC
6260]
Length = 666
Score = 93.6 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 56/164 (34%), Positives = 91/164 (55%), Gaps = 5/164 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL+ + R ++ LS ++YLVLDEAD++ ++G I +V+ C P +
Sbjct: 332 CDLLVATPGRLKDLLERGRVSLSNIKYLVLDEADRMLDMG-FEPQIRHIVQECDMPGVES 390
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + D + + VGR + SE+I QK+++ +E K + L
Sbjct: 391 RQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGSTSENITQKVLYVEDDEKKSVLL-DL 449
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + N +IF ++K A L L A IH D SQ +
Sbjct: 450 LSANDNGLTIIFTETKRMADNLADFLYDQGFPATAIHGDRSQYE 493
>gi|146413260|ref|XP_001482601.1| hypothetical protein PGUG_05621 [Meyerozyma guilliermondii ATCC
6260]
Length = 666
Score = 93.6 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 56/164 (34%), Positives = 91/164 (55%), Gaps = 5/164 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL+ + R ++ LS ++YLVLDEAD++ ++G I +V+ C P +
Sbjct: 332 CDLLVATPGRLKDLLERGRVSLSNIKYLVLDEADRMLDMG-FEPQIRHIVQECDMPGVES 390
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + D + + VGR + SE+I QK+++ +E K + L
Sbjct: 391 RQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGSTSENITQKVLYVEDDEKKSVLL-DL 449
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + N +IF ++K A L L A IH D SQ +
Sbjct: 450 LSANDNGLTIIFTETKRMADNLADFLYDQGFPATAIHGDRSQYE 493
>gi|350638524|gb|EHA26880.1| hypothetical protein ASPNIDRAFT_46407 [Aspergillus niger ATCC 1015]
Length = 729
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 107/192 (55%), Gaps = 32/192 (16%)
Query: 16 CDILISTPLRL--RLAIRRKK--IDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP 71
DIL++TPL L L+ R K L V +VLDEAD L + + +D + ++C++P
Sbjct: 354 SDILVTTPLLLVNALSANRTKPLATLPLVRNVVLDEADVLLDPLFRDQTLD-IWRSCTHP 412
Query: 72 SIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASESIKQKLVFA 119
+ SL+SAT+ VE+LA+S + + +R++VG K++A +IK KLV+A
Sbjct: 413 ELRASLWSATMGSNVEDLAKSTIKERKDTLSETKSYPLLRLVVGLKDSAIPNIKHKLVYA 472
Query: 120 GSEEGKLLALRQ----SFAES----LNPPVLIFVQSKDRAKELYGELAFD-------DIR 164
+E+GKLL LRQ + A S L PP LIF Q+ RA L+ EL +D R
Sbjct: 473 ATEQGKLLGLRQLLHPAAASSTDIRLRPPFLIFTQTIPRAVALHSELRYDIPPEAGGSSR 532
Query: 165 AGVIHSDLSQTQ 176
V+HS+LS Q
Sbjct: 533 IAVLHSELSDGQ 544
>gi|358370761|dbj|GAA87371.1| ATP-dependent RNA helicase rok1 [Aspergillus kawachii IFO 4308]
Length = 726
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 107/192 (55%), Gaps = 32/192 (16%)
Query: 16 CDILISTPLRL--RLAIRRKK--IDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP 71
DIL++TPL L L+ R K L V +VLDEAD L + + +D + ++C++P
Sbjct: 351 SDILVTTPLLLVNALSANRTKPLATLPLVRNVVLDEADVLLDPLFRDQTLD-IWRSCTHP 409
Query: 72 SIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASESIKQKLVFA 119
+ SL+SAT+ VE+LA+S + + +R++VG K++A +IK KLV+A
Sbjct: 410 ELRASLWSATMGSNVEDLAKSTIKERKDTLSETKSYPLLRLVVGLKDSAIPNIKHKLVYA 469
Query: 120 GSEEGKLLALRQ----SFAES----LNPPVLIFVQSKDRAKELYGELAFD-------DIR 164
+E+GKLL LRQ + A S L PP LIF Q+ RA L+ EL +D R
Sbjct: 470 ATEQGKLLGLRQLLHPAAASSTDIRLRPPFLIFTQTIPRAVALHSELRYDIPPEAGGSSR 529
Query: 165 AGVIHSDLSQTQ 176
V+HS+LS Q
Sbjct: 530 IAVLHSELSDGQ 541
>gi|146161201|ref|XP_976799.2| Type III restriction enzyme, res subunit family protein
[Tetrahymena thermophila]
gi|146146830|gb|EAR86204.2| Type III restriction enzyme, res subunit family protein
[Tetrahymena thermophila SB210]
Length = 668
Score = 93.2 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 56/140 (40%), Positives = 84/140 (60%), Gaps = 3/140 (2%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS-IVR 75
DILI+TPL+ R+ + ++EY+V DEAD+ FE N+ + +++ +
Sbjct: 332 DILITTPLKFIKMNRKSHTEFDKLEYIVFDEADRYFEF-NIAGQMKRILETFQEKQGLTY 390
Query: 76 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 135
LFSAT+ VEEL ++I+ D +++ +G KN SI+Q L + SE GKL+ L+
Sbjct: 391 LLFSATIQHPVEELVKNIIVDPLKLQIGGKNNVLASIEQSLSYCQSEYGKLVELKNIINN 450
Query: 136 -SLNPPVLIFVQSKDRAKEL 154
NPPVLIFVQSK+R +EL
Sbjct: 451 GEFNPPVLIFVQSKERGEEL 470
>gi|323306983|gb|EGA60267.1| Dbp1p [Saccharomyces cerevisiae FostersO]
Length = 452
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 95/167 (56%), Gaps = 9/167 (5%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
CD+L++TP RL + R K+ L+ ++YLVLDEAD++ ++G I +V+ C PS+
Sbjct: 122 GCDLLVATPGRLNDLLERGKVSLANIKYLVLDEADRMLDMG-FEPQIRHIVEECDMPSVE 180
Query: 75 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 129
+FSAT P ++ LAR + + + + VGR + SE+I Q++++ + K LL L
Sbjct: 181 NRQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVGSTSENITQRILYVDDMDKKSALLDL 240
Query: 130 RQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + L LIFV++K A +L L + +A IH D +Q +
Sbjct: 241 LSAEHKGL---TLIFVETKRMADQLTDFLIMQNFKATAIHGDRTQAE 284
>gi|326473391|gb|EGD97400.1| ATP-dependent RNA helicase ROK1 [Trichophyton tonsurans CBS 112818]
Length = 745
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 103/201 (51%), Gaps = 49/201 (24%)
Query: 16 CDILISTPLRLRLAI----RRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDP-------- 63
DIL++TPL L A+ ++ + VE L+LDEAD L +DP
Sbjct: 366 SDILVTTPLLLVNALSDNGHKELASMPLVESLILDEADVL---------LDPLFRDQTLK 416
Query: 64 VVKACSNPSIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASES 111
+ ++C NP + L+SAT+ +EELA++ + D +R++VG K++A +
Sbjct: 417 IWQSCVNPRLRVGLWSATMGSNIEELAKATIGDRQKALSLKEESSLIRLVVGLKDSAIPN 476
Query: 112 IKQKLVFAGSEEGKLLALRQ---------SFAESLNPPVLIFVQSKDRAKELYGELAFD- 161
I KL +A +E+GKLL LRQ S + L PP ++F Q+ RA L+ EL +D
Sbjct: 477 ISHKLTYAATEQGKLLGLRQLLHPTTATASAGKHLRPPFIVFTQTIPRAVALHSELMYDI 536
Query: 162 ------DIRAGVIHSDLSQTQ 176
R V+HS+LS +Q
Sbjct: 537 PPEAGGSSRIAVLHSELSDSQ 557
>gi|327294956|ref|XP_003232173.1| ATP-dependent RNA helicase ROK1 [Trichophyton rubrum CBS 118892]
gi|326465345|gb|EGD90798.1| ATP-dependent RNA helicase ROK1 [Trichophyton rubrum CBS 118892]
Length = 745
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 103/195 (52%), Gaps = 39/195 (20%)
Query: 17 DILISTPLRLRLAI----RRKKIDLSRVEYLVLDEADKLFEV---GNLLKHIDPVVKACS 69
DIL++TPL L A+ ++ + VE L+LDEAD L + LK + ++C
Sbjct: 367 DILVTTPLLLVNALSDNGHKELASMPLVESLILDEADVLLDPLFRDQTLK----IWQSCI 422
Query: 70 NPSIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASESIKQKLV 117
NP + L+SAT+ +EELA++ + + VR++VG K++A +I KL
Sbjct: 423 NPRLRVGLWSATMGSNIEELAKATIRERQKALGLKEESSLVRLVVGLKDSAIPNISHKLT 482
Query: 118 FAGSEEGKLLALRQ---------SFAESLNPPVLIFVQSKDRAKELYGELAFD------- 161
+A +E+GKLL LRQ S E L PP ++F Q+ RA L+ EL +D
Sbjct: 483 YAATEQGKLLGLRQLLHPTTATASSGEHLRPPFIVFTQTIPRAVALHSELMYDIPPEAGG 542
Query: 162 DIRAGVIHSDLSQTQ 176
R V+HS+LS +Q
Sbjct: 543 SSRIAVLHSELSDSQ 557
>gi|239612630|gb|EEQ89617.1| ATP-dependent RNA helicase ROK1 [Ajellomyces dermatitidis ER-3]
gi|327356864|gb|EGE85721.1| ATP-dependent RNA helicase ROK1 [Ajellomyces dermatitidis ATCC
18188]
Length = 754
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 103/201 (51%), Gaps = 49/201 (24%)
Query: 16 CDILISTPLRLRLAIRRKK----IDLSRVEYLVLDEADKLFEVGNLLKHIDP-------- 63
DIL+STPL L ++ K L V +VLDEAD L +DP
Sbjct: 373 SDILVSTPLLLANSLSGNKKHSTATLPTVRSVVLDEADVL---------LDPLFRDQTLN 423
Query: 64 VVKACSNPSIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASES 111
V AC+N + L+SAT+ +EELA+S + + VR++VG K+TA +
Sbjct: 424 VWSACTNAQLRVGLWSATMGSSIEELAKSTIGERQQSLGLRSESFLVRLVVGLKDTAIPN 483
Query: 112 IKQKLVFAGSEEGKLLALRQ--------SFAES-LNPPVLIFVQSKDRAKELYGELAFD- 161
I KLV+A +E+GKLL LRQ S +++ L PP L+F Q+ RA L+ EL +D
Sbjct: 484 ISHKLVYAATEQGKLLGLRQLLHPKGGGSTSDTHLRPPFLVFTQTISRAVALHSELKYDI 543
Query: 162 ------DIRAGVIHSDLSQTQ 176
R V+HS+LS +Q
Sbjct: 544 PAEAGGSSRIAVLHSELSDSQ 564
>gi|261191576|ref|XP_002622196.1| ATP-dependent RNA helicase ROK1 [Ajellomyces dermatitidis SLH14081]
gi|239589962|gb|EEQ72605.1| ATP-dependent RNA helicase ROK1 [Ajellomyces dermatitidis SLH14081]
Length = 753
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 103/201 (51%), Gaps = 49/201 (24%)
Query: 16 CDILISTPLRLRLAIRRKK----IDLSRVEYLVLDEADKLFEVGNLLKHIDP-------- 63
DIL+STPL L ++ K L V +VLDEAD L +DP
Sbjct: 372 SDILVSTPLLLANSLSGNKKHSTATLPTVRSVVLDEADVL---------LDPLFRDQTLN 422
Query: 64 VVKACSNPSIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASES 111
V AC+N + L+SAT+ +EELA+S + + VR++VG K+TA +
Sbjct: 423 VWSACTNAQLRVGLWSATMGSSIEELAKSTIGERQQSLGLRSESFLVRLVVGLKDTAIPN 482
Query: 112 IKQKLVFAGSEEGKLLALRQ--------SFAES-LNPPVLIFVQSKDRAKELYGELAFD- 161
I KLV+A +E+GKLL LRQ S +++ L PP L+F Q+ RA L+ EL +D
Sbjct: 483 ISHKLVYAATEQGKLLGLRQLLHPKGGGSTSDTHLRPPFLVFTQTISRAVALHSELKYDI 542
Query: 162 ------DIRAGVIHSDLSQTQ 176
R V+HS+LS +Q
Sbjct: 543 PAEAGGSSRIAVLHSELSDSQ 563
>gi|440468040|gb|ELQ37225.1| ATP-dependent RNA helicase ded-1 [Magnaporthe oryzae Y34]
gi|440487534|gb|ELQ67318.1| ATP-dependent RNA helicase ded-1 [Magnaporthe oryzae P131]
Length = 665
Score = 92.8 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 55/164 (33%), Positives = 91/164 (55%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P++
Sbjct: 319 CDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPNVQD 377
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++++LAR + D + + VGR + SE+I Q+++ + K+ L
Sbjct: 378 RQTLMFSATFPGYIQQLARDFLKDYIFLSVGRVGSTSENITQRVMEVKHRDDKISHLLDL 437
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ LIFV++K A EL L ++ A IH D +Q +
Sbjct: 438 LSTHGGGLTLIFVETKRNADELSDFLQNQNLPATSIHGDRTQRE 481
>gi|389635125|ref|XP_003715215.1| ATP-dependent RNA helicase DED1 [Magnaporthe oryzae 70-15]
gi|152013501|sp|A4RHF1.2|DED1_MAGO7 RecName: Full=ATP-dependent RNA helicase DED1
gi|351647548|gb|EHA55408.1| ATP-dependent RNA helicase DED1 [Magnaporthe oryzae 70-15]
Length = 671
Score = 92.8 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 55/164 (33%), Positives = 91/164 (55%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P++
Sbjct: 325 CDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPNVQD 383
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++++LAR + D + + VGR + SE+I Q+++ + K+ L
Sbjct: 384 RQTLMFSATFPGYIQQLARDFLKDYIFLSVGRVGSTSENITQRVMEVKHRDDKISHLLDL 443
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ LIFV++K A EL L ++ A IH D +Q +
Sbjct: 444 LSTHGGGLTLIFVETKRNADELSDFLQNQNLPATSIHGDRTQRE 487
>gi|291225668|ref|XP_002732809.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 795
Score = 92.8 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 61/172 (35%), Positives = 93/172 (54%), Gaps = 9/172 (5%)
Query: 9 TDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKAC 68
T + C+IL++TP RL ++RK +L RV +LVLDEAD++F++G +P V++
Sbjct: 374 TKACQAGCEILVATPGRLIDLVKRKATNLERVTFLVLDEADRMFDMG-----FEPQVRSI 428
Query: 69 SN---PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK 125
+N P LFSAT VE LAR I+ D +RVI G A+E + Q + K
Sbjct: 429 ANHVRPDRQTLLFSATFRKKVERLARDILTDPIRVIQGDLGEANEDVVQIVECLSDGPAK 488
Query: 126 LLAL-RQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L ++ + + VLIFV K ++EL L D G++H D+ Q++
Sbjct: 489 WPWLIKRLVSFTTEGSVLIFVTKKANSEELASNLKTHDFDLGLLHGDMDQSE 540
>gi|410082495|ref|XP_003958826.1| hypothetical protein KAFR_0H02820 [Kazachstania africana CBS 2517]
gi|372465415|emb|CCF59691.1| hypothetical protein KAFR_0H02820 [Kazachstania africana CBS 2517]
Length = 611
Score = 92.8 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 60/166 (36%), Positives = 89/166 (53%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL + R KI L V YL+LDEAD++ ++G I +V+ C P +
Sbjct: 271 CDLLVATPGRLNDLLERGKISLMNVRYLILDEADRMLDMG-FEPQIRHIVEDCDMPEVQD 329
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + + V + VGR + SE+I QK++ + K LL L
Sbjct: 330 RQTLMFSATFPRDIQHLARDFLKNYVFLSVGRVGSTSENITQKIIMVEDMDKKSALLDLL 389
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E L LIFV++K A +L L + A IH D +Q +
Sbjct: 390 AYQHEGL---TLIFVETKRMADQLTDFLIMQNFNATAIHGDRTQEE 432
>gi|325090778|gb|EGC44088.1| ATP-dependent RNA helicase ROK1 [Ajellomyces capsulatus H88]
Length = 751
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 106/194 (54%), Gaps = 35/194 (18%)
Query: 16 CDILISTPLRLRLAIRRKK----IDLSRVEYLVLDEADKLFEVGNLLK-HIDPVVKACSN 70
DIL+STPL L ++ K L ++ LVLDEAD L + +L + V +AC+N
Sbjct: 370 SDILVSTPLLLANSLSGNKSRSIAPLPTIQSLVLDEADVLLD--SLFRDQTLEVWRACTN 427
Query: 71 PSIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASESIKQKLVF 118
+ L+SAT+ +EELA+S +++ VR++VG K+TA +I KLV+
Sbjct: 428 ARLRVGLWSATMGSSIEELAKSTINERRRSLGLRDESFLVRLVVGLKDTAIPNISHKLVY 487
Query: 119 AGSEEGKLLALRQ--------SFAES-LNPPVLIFVQSKDRAKELYGELAFD-------D 162
A +E+GKLL LRQ S +++ L P L+F Q+ RA L+ EL +D
Sbjct: 488 AATEQGKLLGLRQLLNPKGASSTSDTHLRAPFLVFTQTISRAVALHSELKYDIPAEAGGA 547
Query: 163 IRAGVIHSDLSQTQ 176
R V+HS+LS +Q
Sbjct: 548 SRIAVLHSELSDSQ 561
>gi|398412466|ref|XP_003857556.1| hypothetical protein MYCGRDRAFT_65543 [Zymoseptoria tritici IPO323]
gi|339477441|gb|EGP92532.1| hypothetical protein MYCGRDRAFT_65543 [Zymoseptoria tritici IPO323]
Length = 701
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 107/205 (52%), Gaps = 54/205 (26%)
Query: 16 CDILISTPLRLRLAIRRKKID----LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS-- 69
DIL+STP L ++ + LS V YLV+DEAD L +DP+ + S
Sbjct: 320 SDILVSTPGTLATIVKEAQEHDGEVLSDVRYLVMDEADVL---------LDPLFREQSLA 370
Query: 70 ------NPSIVRSLFSATLPDFVEELARSIMHDA-----------------VRVIVGRKN 106
P + SL+SAT+ +EELAR+++++ +R++VG K+
Sbjct: 371 IWNALLRPDLRVSLWSATMGSNIEELARTVINERRMRISASLAGECVEAPLIRLVVGLKD 430
Query: 107 TASESIKQKLVFAGSEEGKLLALRQ------SFAES---LNPPVLIFVQSKDRAKELYGE 157
+A +I+ +LV+A SE+GKL+ LRQ + AES L PP L+F Q+ +RA L+ E
Sbjct: 431 SAVPNIQHRLVYAASEQGKLMGLRQLLHPTTTTAESGPPLLPPFLVFTQTIERAVALHSE 490
Query: 158 LAFDDI-------RAGVIHSDLSQT 175
L +D R V+HSDLS T
Sbjct: 491 LLYDIPPEAGGISRIAVLHSDLSDT 515
>gi|449302774|gb|EMC98782.1| hypothetical protein BAUCODRAFT_120082 [Baudoinia compniacensis
UAMH 10762]
Length = 699
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 103/204 (50%), Gaps = 53/204 (25%)
Query: 16 CDILISTPLRLRLAIRRKKI---DLSRVEYLVLDEADKLFEVGNLLKHIDPVVKA----- 67
DIL+STP L +R +I DL V L+LDEAD L +DP+ +
Sbjct: 321 ADILVSTPGLLHAMLRDDEISSADLVNVSSLILDEADVL---------LDPLFREQTLST 371
Query: 68 ---CSNPSIVRSLFSATLPDFVEELARSIMH-----------------DAVRVIVGRKNT 107
+NP + SL+SAT+ +EEL RS + +RV+VG K++
Sbjct: 372 WDNLNNPELRVSLWSATMGSNIEELTRSTLERRLKRLREQHGLQVEEAPLIRVVVGLKDS 431
Query: 108 ASESIKQKLVFAGSEEGKLLALRQ---------SFAESLNPPVLIFVQSKDRAKELYGEL 158
A +++ +LV+A +E+GKL+ALRQ SL PP L+F Q+ +RA L+ EL
Sbjct: 432 AVSNVQHRLVYAATEQGKLMALRQLLHPTSTSKDIGPSLLPPFLVFTQTIERAIALHSEL 491
Query: 159 AFD-DIRAG------VIHSDLSQT 175
+D AG V+H+DLS T
Sbjct: 492 LYDIPAEAGGISRIAVLHADLSDT 515
>gi|150864373|ref|XP_001383156.2| ATP-dependent RNA helicase of DEAD box family [Scheffersomyces
stipitis CBS 6054]
gi|149385629|gb|ABN65127.2| ATP-dependent RNA helicase of DEAD box family, partial
[Scheffersomyces stipitis CBS 6054]
Length = 616
Score = 92.4 bits (228), Expect = 7e-17, Method: Composition-based stats.
Identities = 58/166 (34%), Positives = 91/166 (54%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL+ + R ++ L+ ++YLVLDEAD++ ++G I +V+ C P +
Sbjct: 271 CDLLVATPGRLKDLLERGRVSLANIKYLVLDEADRMLDMG-FEPQIRHIVQECDMPDVQD 329
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + D + + VGR + SE+I QK+++ EE K LL L
Sbjct: 330 RQTLMFSATFPTDIQMLARDFLKDYIFLSVGRVGSTSENITQKILYVEDEEKKSVLLDLL 389
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L +IF ++K A L L A IH D SQ +
Sbjct: 390 SAGDAGL---TIIFTETKRMADNLADFLYDQGFPATAIHGDRSQYE 432
>gi|158514835|sp|A3LQ01.3|DED1_PICST RecName: Full=ATP-dependent RNA helicase DED1
Length = 647
Score = 92.0 bits (227), Expect = 7e-17, Method: Composition-based stats.
Identities = 58/166 (34%), Positives = 91/166 (54%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL+ + R ++ L+ ++YLVLDEAD++ ++G I +V+ C P +
Sbjct: 302 CDLLVATPGRLKDLLERGRVSLANIKYLVLDEADRMLDMG-FEPQIRHIVQECDMPDVQD 360
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + D + + VGR + SE+I QK+++ EE K LL L
Sbjct: 361 RQTLMFSATFPTDIQMLARDFLKDYIFLSVGRVGSTSENITQKILYVEDEEKKSVLLDLL 420
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L +IF ++K A L L A IH D SQ +
Sbjct: 421 SAGDAGL---TIIFTETKRMADNLADFLYDQGFPATAIHGDRSQYE 463
>gi|451994512|gb|EMD86982.1| hypothetical protein COCHEDRAFT_1197856 [Cochliobolus
heterostrophus C5]
Length = 751
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 109/219 (49%), Gaps = 56/219 (25%)
Query: 2 KKELVRSTDLSKFSCDILISTPLRLRLAIRRKK---IDLSRVEYLVLDEADKLFEVGNLL 58
KK+ R +L K + IL+STPL L +++R+ ++ + LVLDEAD L
Sbjct: 363 KKKTGRQAELVKAA--ILVSTPLALVNSLKRRDGTVANIPSISQLVLDEADVL------- 413
Query: 59 KHIDP--------VVKACSNPSIVRSLFSATLPDFVEELARSIMHDA------------- 97
+DP V AC+NPS+ L+SAT+ +E LA S ++D
Sbjct: 414 --LDPLFREQTLAVWNACTNPSLRVGLWSATMGSNIESLAISTLNDRWSAISLSQSALPP 471
Query: 98 ----VRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ----------SFAESLNPPVLI 143
+R++VG K++A +I +L +A +E+GKLL LRQ S L PP L+
Sbjct: 472 RPPLIRLVVGLKDSAIPNISHQLTYAATEQGKLLGLRQLLHPTALHTDSSQPILRPPFLV 531
Query: 144 FVQSKDRAKELYGELAFD-------DIRAGVIHSDLSQT 175
F Q+ RA L+ EL +D R V+H+DLS +
Sbjct: 532 FTQTIPRAIALHSELLYDIPPEAGGSSRIAVLHADLSSS 570
>gi|354547955|emb|CCE44690.1| hypothetical protein CPAR2_404940 [Candida parapsilosis]
Length = 647
Score = 92.0 bits (227), Expect = 8e-17, Method: Composition-based stats.
Identities = 55/164 (33%), Positives = 92/164 (56%), Gaps = 5/164 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL+ + R ++ L+ ++YLVLDEAD++ ++G I +V+ C PS+
Sbjct: 298 CDLLVATPGRLKDLLERGRVSLANIKYLVLDEADRMLDMG-FEPQIRQIVQECDMPSVEN 356
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + + + + VGR + SE+I QK+++ EE K + L
Sbjct: 357 RQTLMFSATFPRDIQMLARDFLKNYIFLSVGRVGSTSENITQKVLYVEDEEKKSVILDML 416
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
A + + ++F ++K A L L A IH D SQ +
Sbjct: 417 NANN-SGLTIVFTETKRMADNLADFLYDQGFPATAIHGDRSQYE 459
>gi|345571134|gb|EGX53949.1| hypothetical protein AOL_s00004g608 [Arthrobotrys oligospora ATCC
24927]
Length = 751
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 98/177 (55%), Gaps = 18/177 (10%)
Query: 16 CDILISTPLRLRLAIR--RKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI 73
+I+++TPL L AI+ +S V ++LDEAD L + L ++ ++PS+
Sbjct: 399 SEIMVATPLLLLHAIQLCPDLFPVSNVSRIILDEADVLLD-DLFLSQTTSIISHLTSPSL 457
Query: 74 VRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASESIKQKLVFAGS 121
S +SAT+P E LA ++ VR+I G K+++ +I+Q + + +
Sbjct: 458 SFSFWSATMPSNSESLATKLISSHSSVLSSNKTRKLVRLIAGIKDSSLPTIRQTITYTAT 517
Query: 122 EEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFD---DIRAGVIHSDLSQT 175
E GKL ALRQ F+ SL P LIF+Q+ RA+ L+ E+ +D R V+HS+LS+T
Sbjct: 518 ERGKLTALRQLFSSSLKTPCLIFLQTIPRAQALHAEIMYDLPTPNRIAVLHSNLSET 574
>gi|295657979|ref|XP_002789553.1| ATP-dependent RNA helicase ROK1 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226283257|gb|EEH38823.1| ATP-dependent RNA helicase ROK1 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 754
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 101/202 (50%), Gaps = 49/202 (24%)
Query: 15 SCDILISTPLRLRLAIRRKK----IDLSRVEYLVLDEADKLFEVGNLLKHIDP------- 63
+ DIL+STP L ++ K LS V+ L LDEAD L +DP
Sbjct: 373 NSDILVSTPPLLANSLSGNKNRDIAPLSAVQSLALDEADVL---------LDPLFREQTL 423
Query: 64 -VVKACSNPSIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASE 110
V +AC+N + L+SAT+ +EEL +S + + VR++VG K+TA
Sbjct: 424 GVWRACTNAQLRVGLWSATMGSNIEELVKSTISERQNSLGLGDESFLVRLVVGLKDTAIP 483
Query: 111 SIKQKLVFAGSEEGKLLALRQSFAES---------LNPPVLIFVQSKDRAKELYGELAFD 161
+I KLV+A +E+GKLL LRQ + L PP L+F Q+ RA L+ EL +D
Sbjct: 484 NISHKLVYAATEQGKLLGLRQLLHPTGAISASDIHLRPPFLVFTQTISRAVALHSELKYD 543
Query: 162 -------DIRAGVIHSDLSQTQ 176
R V+HS+LS +Q
Sbjct: 544 IPAEAGGPSRIAVLHSELSDSQ 565
>gi|258578393|ref|XP_002543378.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237903644|gb|EEP78045.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 958
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 101/200 (50%), Gaps = 48/200 (24%)
Query: 16 CDILISTPLRLRLAIRRKKID----LSRVEYLVLDEADKLFEVGNLLKHIDP-------- 63
DIL+ TPL L A+ + + L V+ LVLDEAD L +DP
Sbjct: 583 SDILVCTPLLLANALSQDEAGDMASLPSVKTLVLDEADVL---------LDPLFREQTLE 633
Query: 64 VVKACSNPSIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASES 111
V KAC+ P + L+SAT+ +EELA++ + +R++VG K+TA +
Sbjct: 634 VWKACTCPQLRVGLWSATMGSNIEELAKATIKARQQSLGLKDESFLIRLVVGLKDTAIPN 693
Query: 112 IKQKLVFAGSEEGKLLALRQ--------SFAESLNPPVLIFVQSKDRAKELYGELAFD-- 161
I KLV+A +E+GKLL LRQ + L PP L+F Q+ RA L+ EL +D
Sbjct: 694 ISHKLVYAATEQGKLLGLRQLLHPTAASNSTTRLRPPFLVFTQTISRAVALHSELMYDIP 753
Query: 162 -----DIRAGVIHSDLSQTQ 176
R V+HS+LS ++
Sbjct: 754 PEAGGSSRIAVLHSELSDSR 773
>gi|241953571|ref|XP_002419507.1| ATP-dependent DEAD-box RNA helicase, putative [Candida dubliniensis
CD36]
gi|223642847|emb|CAX43102.1| ATP-dependent DEAD-box RNA helicase, putative [Candida dubliniensis
CD36]
Length = 667
Score = 92.0 bits (227), Expect = 8e-17, Method: Composition-based stats.
Identities = 55/164 (33%), Positives = 90/164 (54%), Gaps = 5/164 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL+ + R K+ L+ + YLVLDEAD++ ++G I +V C P++
Sbjct: 321 CDLLVATPGRLKDLLDRGKVSLANIRYLVLDEADRMLDMG-FEPQIRYIVDECDMPAVKD 379
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + D + + VGR + SE+I QK+++ +E K + L
Sbjct: 380 RQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGSTSENITQKILYVEDDEKKSVIL-DL 438
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + N ++F ++K A L L A IH D SQ +
Sbjct: 439 LSANENGLTIVFTETKRMADNLADYLYDQGFPATAIHGDRSQYE 482
>gi|448522534|ref|XP_003868713.1| Ded1 protein [Candida orthopsilosis Co 90-125]
gi|380353053|emb|CCG25809.1| Ded1 protein [Candida orthopsilosis]
Length = 636
Score = 92.0 bits (227), Expect = 9e-17, Method: Composition-based stats.
Identities = 55/164 (33%), Positives = 91/164 (55%), Gaps = 5/164 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL+ + R ++ L+ ++YLVLDEAD++ ++G I +V+ C PS+
Sbjct: 292 CDLLVATPGRLKDLLERGRVSLANIKYLVLDEADRMLDMG-FEPQIRQIVQECDMPSVEN 350
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + + + + VGR + SE+I QK+++ +E K + L
Sbjct: 351 RQTLMFSATFPRDIQMLARDFLKNYIFLSVGRVGSTSENITQKVLYVEDDEKKSVILDML 410
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
A S ++F ++K A L L A IH D SQ +
Sbjct: 411 NANSAG-LTIVFTETKRMADNLADFLYDQGFPATAIHGDRSQYE 453
>gi|50419477|ref|XP_458265.1| DEHA2C13486p [Debaryomyces hansenii CBS767]
gi|74659403|sp|Q6BU54.1|DED1_DEBHA RecName: Full=ATP-dependent RNA helicase DED1
gi|49653931|emb|CAG86342.1| DEHA2C13486p [Debaryomyces hansenii CBS767]
Length = 630
Score = 91.7 bits (226), Expect = 9e-17, Method: Composition-based stats.
Identities = 55/164 (33%), Positives = 91/164 (55%), Gaps = 5/164 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL+ + R ++ L+ ++YLVLDEAD++ ++G I +V+ C P +
Sbjct: 290 CDLLVATPGRLKDLLERGRVSLASIKYLVLDEADRMLDMG-FEPQIRHIVQECDMPGVED 348
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + + + + VGR + SE+I QK+++ EE K + L
Sbjct: 349 RQTLMFSATFPKEIQFLARDFLKEYIFLSVGRVGSTSENITQKILYVEDEEKKSVLL-DL 407
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + N +IF ++K A L L A IH D SQ +
Sbjct: 408 LSANDNGLTIIFTETKRMADNLADFLYDQGFPATAIHGDRSQYE 451
>gi|302655511|ref|XP_003019542.1| hypothetical protein TRV_06416 [Trichophyton verrucosum HKI 0517]
gi|291183274|gb|EFE38897.1| hypothetical protein TRV_06416 [Trichophyton verrucosum HKI 0517]
Length = 745
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 103/196 (52%), Gaps = 39/196 (19%)
Query: 16 CDILISTPLRLRLAI----RRKKIDLSRVEYLVLDEADKLFEV---GNLLKHIDPVVKAC 68
DIL++TPL L A+ ++ + VE L+LDEAD L + LK + ++C
Sbjct: 366 SDILVTTPLLLVNALSDNGHKELASMPLVESLILDEADVLLDPLFRDQTLK----IWQSC 421
Query: 69 SNPSIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASESIKQKL 116
NP + L+SAT+ +EELA++ + + VR++VG K++A +I KL
Sbjct: 422 VNPRLRVGLWSATMGSNIEELAKATIGERQKALGLEEESSLVRLVVGLKDSAVPNISHKL 481
Query: 117 VFAGSEEGKLLALRQ---------SFAESLNPPVLIFVQSKDRAKELYGELAFD------ 161
+A +E+GKLL LRQ S + L PP ++F Q+ RA L+ EL +D
Sbjct: 482 TYAATEQGKLLGLRQLLHPTTATASAGKHLRPPFIVFTQTIPRAVALHSELMYDIPPEAG 541
Query: 162 -DIRAGVIHSDLSQTQ 176
R V+HS+LS +Q
Sbjct: 542 GSSRIAVLHSELSDSQ 557
>gi|337269037|ref|YP_004613092.1| DEAD/DEAH box helicase domain-containing protein [Mesorhizobium
opportunistum WSM2075]
gi|336029347|gb|AEH88998.1| DEAD/DEAH box helicase domain protein [Mesorhizobium opportunistum
WSM2075]
Length = 477
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 94/161 (58%), Gaps = 3/161 (1%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
DILI+TP RL +R + LS ++LVLDE D++ ++G + + + KA + P
Sbjct: 143 GVDILIATPGRLTDLVREGDLILSDTKWLVLDEGDRMLDMG-FINDVKRIAKATA-PDRQ 200
Query: 75 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
+LFSAT+PD + ELA+ ++ + VR+ V ++TA+ I Q +VFA +++ K L A
Sbjct: 201 TALFSATMPDEIAELAKGLLKNPVRIEVSPQSTAAAEIVQGVVFARTKQ-KRQVLSTMLA 259
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
++ V+IF ++K A + +L D +A VIH + SQ
Sbjct: 260 DAAMKSVIIFSRTKHGADRVTKDLERDGFKAAVIHGNKSQN 300
>gi|425780912|gb|EKV18905.1| ATP dependent RNA helicase (Rok1), putative [Penicillium digitatum
PHI26]
gi|425783046|gb|EKV20915.1| ATP dependent RNA helicase (Rok1), putative [Penicillium digitatum
Pd1]
Length = 723
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 100/202 (49%), Gaps = 50/202 (24%)
Query: 16 CDILISTPLRLRLAIRRKKID----LSRVEYLVLDEADKLFEVGNLLKHIDP-------- 63
DIL++TPL L A+ + L V LV+DEAD L +DP
Sbjct: 341 SDILVTTPLMLVNALSANRTTTMATLPLVRSLVMDEADVL---------LDPLFREQTLE 391
Query: 64 VVKACSNPSIVRSLFSATLPDFVEELARSIM--------------HDAVRVIVGRKNTAS 109
+ K+CS+P + L+SAT+ +E+L +S + H +R++VG K++A
Sbjct: 392 IWKSCSHPDLRVGLWSATMGSNIEDLTKSTIKERLEDLERKPSKPHALLRLVVGLKDSAI 451
Query: 110 ESIKQKLVFAGSEEGKLLALRQSFAES--------LNPPVLIFVQSKDRAKELYGELAFD 161
+I KLV+A +E+GKL+ LRQ + L PP LIF Q+ RA L+ EL +D
Sbjct: 452 PNIDHKLVYAATEQGKLMGLRQLLRPAAASASDVRLRPPFLIFTQTIPRAVALHSELKYD 511
Query: 162 -------DIRAGVIHSDLSQTQ 176
R V+HSDLS Q
Sbjct: 512 IPAEAGGSSRIAVLHSDLSDGQ 533
>gi|225561335|gb|EEH09615.1| ATP-dependent RNA helicase ROK1 [Ajellomyces capsulatus G186AR]
Length = 751
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 105/194 (54%), Gaps = 35/194 (18%)
Query: 16 CDILISTPLRLRLAIRRKK----IDLSRVEYLVLDEADKLFEVGNLLK-HIDPVVKACSN 70
DIL+STPL L ++ K L ++ LVLDEAD L + +L + V +AC+N
Sbjct: 370 SDILVSTPLLLANSLSGNKSRSIAPLPTIQSLVLDEADVLLD--SLFRDQTLEVWRACTN 427
Query: 71 PSIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASESIKQKLVF 118
+ L+SAT+ +EEL +S +++ VR++VG K+TA +I KLV+
Sbjct: 428 ARLRVGLWSATMGSSIEELTKSTINERRRSLGLRDESFLVRLVVGLKDTAIPNISHKLVY 487
Query: 119 AGSEEGKLLALRQ--------SFAES-LNPPVLIFVQSKDRAKELYGELAFD-------D 162
A +E+GKLL LRQ S +++ L P L+F Q+ RA L+ EL +D
Sbjct: 488 AATEQGKLLGLRQLLNPKGASSTSDTHLRAPFLVFTQTISRAVALHSELKYDIPAEAGGS 547
Query: 163 IRAGVIHSDLSQTQ 176
R V+HS+LS +Q
Sbjct: 548 SRIAVLHSELSDSQ 561
>gi|156086412|ref|XP_001610615.1| DEAD box RNA helicase [Babesia bovis T2Bo]
gi|154797868|gb|EDO07047.1| DEAD box RNA helicase, putative [Babesia bovis]
Length = 457
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 90/153 (58%), Gaps = 2/153 (1%)
Query: 12 SKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP 71
+ F+ +I ISTP L +++ K L +E LV+DEAD L E G K +D ++ +
Sbjct: 164 TNFNAEICISTPGTLHSLMKKYKSILDSLECLVVDEADVLLE-GGYAKQLDKILAKLIDK 222
Query: 72 SIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
I + +FS+T+ V ELA + M DAV+V VG+ ++++Q+LV +E GK+ LRQ
Sbjct: 223 DITKLVFSSTMQPQVLELAATFMPDAVKVAVGQSTRVCKNVRQELVCVTNESGKIPTLRQ 282
Query: 132 SFAES-LNPPVLIFVQSKDRAKELYGELAFDDI 163
+ + P L+F+QS DR ++Y ++ D++
Sbjct: 283 LIRDGKIKLPCLVFLQSIDRVTQVYNQMKDDNL 315
>gi|357028767|ref|ZP_09090792.1| DEAD/DEAH box helicase domain-containing protein [Mesorhizobium
amorphae CCNWGS0123]
gi|355537467|gb|EHH06723.1| DEAD/DEAH box helicase domain-containing protein [Mesorhizobium
amorphae CCNWGS0123]
Length = 482
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 94/161 (58%), Gaps = 3/161 (1%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
DILI+TP RL +R + LS ++LVLDE D++ ++G + + + KA + P
Sbjct: 144 GVDILIATPGRLTDLVREGDLILSDTKWLVLDEGDRMLDMG-FINDVKRIAKATA-PDRQ 201
Query: 75 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
+LFSAT+PD + ELA+ ++ + VR+ V ++TA+ I Q +VFA +++ K L + A
Sbjct: 202 TALFSATMPDEIAELAKGLLKNPVRIEVSPQSTAAAEIVQGVVFARTKQ-KRQVLSKMLA 260
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
+ V+IF ++K A + +L D +A VIH + SQ
Sbjct: 261 DEAMRSVIIFSRTKHGADRVTKDLERDGFKAAVIHGNKSQN 301
>gi|443727317|gb|ELU14120.1| hypothetical protein CAPTEDRAFT_224610 [Capitella teleta]
Length = 830
Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 59/170 (34%), Positives = 92/170 (54%), Gaps = 5/170 (2%)
Query: 10 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
DLSK C +L++TP RL + R K+ + R+ +LVLDEAD++ ++G I +V+ +
Sbjct: 468 DLSK-GCHLLVATPGRLVDMMERGKVGVERIRFLVLDEADRMLDMG-FEPQIRRIVEKDN 525
Query: 70 NPSIVRS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 126
P +FSAT P ++ LAR +HD + + VGR + SE+I QK+V+ + +
Sbjct: 526 MPVTGDRQTLMFSATFPKEIQMLARDFLHDYIFLAVGRVGSTSENITQKVVWVEDNDKRS 585
Query: 127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L A + L+FV++K A L L + AG IH D SQ +
Sbjct: 586 FLLDLLNASGPDSLTLVFVETKKGADSLEYFLYTEGYPAGSIHGDRSQRE 635
>gi|13470594|ref|NP_102163.1| ATP-dependent RNA helicase [Mesorhizobium loti MAFF303099]
gi|14021336|dbj|BAB47949.1| ATP-dependent RNA helicase [Mesorhizobium loti MAFF303099]
Length = 467
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 93/161 (57%), Gaps = 3/161 (1%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
DILI+TP RL +R + LS ++LVLDE D++ ++G + + + KA + P
Sbjct: 133 GVDILIATPGRLTDLVREGDLILSDTKWLVLDEGDRMLDMG-FINDVKRIAKATA-PDRQ 190
Query: 75 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
+LFSAT+PD + ELA+ ++ + VR+ V ++TA+ I Q +VFA +++ K L A
Sbjct: 191 TALFSATMPDEIAELAKGLLKNPVRIEVSPQSTAAAEIVQGVVFARTKQ-KRQVLSTMLA 249
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
+ V+IF ++K A + +L D +A VIH + SQ
Sbjct: 250 DEAMKSVIIFSRTKHGADRVTKDLERDGFKAAVIHGNKSQN 290
>gi|408370410|ref|ZP_11168187.1| DEAD/DEAH box helicase [Galbibacter sp. ck-I2-15]
gi|407744168|gb|EKF55738.1| DEAD/DEAH box helicase [Galbibacter sp. ck-I2-15]
Length = 575
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 102/180 (56%), Gaps = 19/180 (10%)
Query: 5 LVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG------NLL 58
++ + K I+++TP R++ I RK +++S+++Y VLDEAD++ +G ++L
Sbjct: 112 IIEQANQVKRGSQIVVATPGRMKDMISRKMVNISKIQYCVLDEADEMLNMGFYEDIKDIL 171
Query: 59 KHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVF 118
H P K+ LFSAT+P V +A+ M+ + VG KN+ASE+++ +
Sbjct: 172 SHT-PKEKST-------WLFSATMPKEVSNIAKKFMNQPHEITVGTKNSASENVQHEYYV 223
Query: 119 AGSEEGKLLALRQSFAESLNPPV--LIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
G + + LAL++ A++ NP + +IF ++K +++ +L D AG +H DLSQ Q
Sbjct: 224 VGGRD-RYLALKR-LADT-NPDIFSVIFCRTKRDTQKVAEKLIEDGYNAGALHGDLSQNQ 280
>gi|433775456|ref|YP_007305923.1| DNA/RNA helicase, superfamily II [Mesorhizobium australicum
WSM2073]
gi|433667471|gb|AGB46547.1| DNA/RNA helicase, superfamily II [Mesorhizobium australicum
WSM2073]
Length = 473
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 93/161 (57%), Gaps = 3/161 (1%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
DILI+TP RL +R + LS ++LVLDE D++ ++G + + + KA + P
Sbjct: 139 GVDILIATPGRLTDLVREGDLILSDTKWLVLDEGDRMLDMG-FINDVKRIAKATA-PDRQ 196
Query: 75 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
+LFSAT+PD + ELA+ ++ + VR+ V ++TA+ I Q +VFA +++ K L A
Sbjct: 197 TALFSATMPDEIAELAKGLLKNPVRIEVSPQSTAAAEIVQGVVFARTKQ-KRQVLSTMLA 255
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
+ V+IF ++K A + +L D +A VIH + SQ
Sbjct: 256 DEAMKSVIIFSRTKHGADRVTKDLERDGFKAAVIHGNKSQN 296
>gi|322780454|gb|EFZ09942.1| hypothetical protein SINV_14078 [Solenopsis invicta]
Length = 377
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 73/119 (61%), Gaps = 4/119 (3%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DILI+TP RL + + I L+ VE+L++DEADKLFE G + +D + +AC N +
Sbjct: 255 DILITTPKRLVFLLNQDPPAISLNNVEWLIVDEADKLFEEGIRGFREQLDEITRACVNTN 314
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
+ R +FSAT V + R M + V VG++N A++ + Q+L+F GSE GKL+ R
Sbjct: 315 LHRGMFSATNTPAVSKWCRRNMKGLITVTVGQRNAAADLVDQELLFVGSERGKLVEFRN 373
>gi|390363099|ref|XP_003730297.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like, partial
[Strongylocentrotus purpuratus]
Length = 448
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 56/72 (77%)
Query: 105 KNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIR 164
+NTA++ I+Q+L+F GSE GKLLA+R F++ PPVL+FVQSK+RAKEL+ EL +D
Sbjct: 246 RNTANDRIEQELIFVGSESGKLLAVRNLFSKGFTPPVLVFVQSKERAKELFQELIYDGYN 305
Query: 165 AGVIHSDLSQTQ 176
VIH+D +QTQ
Sbjct: 306 VDVIHADKTQTQ 317
>gi|50310213|ref|XP_455126.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74660335|sp|Q6CLR3.1|DED1_KLULA RecName: Full=ATP-dependent RNA helicase DED1
gi|49644262|emb|CAG97833.1| KLLA0F01034p [Kluyveromyces lactis]
Length = 627
Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 58/169 (34%), Positives = 93/169 (55%), Gaps = 9/169 (5%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
++ C++L++TP RL + R+ I L+ V+YLVLDEAD++ ++G I +V+ PS
Sbjct: 290 RYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMG-FEPQIRRIVEGSDMPS 348
Query: 73 IVRS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAG--SEEGKLL 127
+ +FSAT P ++ LA + D V + VGR + SE+I QK+++ + LL
Sbjct: 349 VDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVEDFDKNDTLL 408
Query: 128 ALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L + E L LIFV++K A L L + +A IH D +Q +
Sbjct: 409 DLLAASNEGL---TLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGE 454
>gi|260800277|ref|XP_002595060.1| hypothetical protein BRAFLDRAFT_125765 [Branchiostoma floridae]
gi|229280302|gb|EEN51071.1| hypothetical protein BRAFLDRAFT_125765 [Branchiostoma floridae]
Length = 875
Score = 90.5 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 57/169 (33%), Positives = 93/169 (55%), Gaps = 11/169 (6%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-- 70
+ +I++ TP RL +++K +L RV YLV DEAD++F++G +P V++ +N
Sbjct: 357 QLGAEIVVCTPGRLIDLVKKKATNLQRVTYLVFDEADRMFDMG-----FEPQVRSIANHV 411
Query: 71 -PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQ--KLVFAGSEEGKLL 127
P LFSAT +E L R I+ D ++V+ G A+E ++Q ++ AG + + L
Sbjct: 412 RPDRQTLLFSATFKKRIERLCRDILMDPIKVVQGDLGEANEDVQQIVEIFPAGPPKWQWL 471
Query: 128 ALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
R S+ VLIFV K ++EL L D AG++H D+ Q++
Sbjct: 472 TRRLVEFTSVG-SVLIFVTKKANSEELASNLKAQDFEAGLLHGDMDQSE 519
>gi|156040647|ref|XP_001587310.1| hypothetical protein SS1G_12340 [Sclerotinia sclerotiorum 1980]
gi|154696396|gb|EDN96134.1| hypothetical protein SS1G_12340 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 721
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 97/200 (48%), Gaps = 49/200 (24%)
Query: 16 CDILISTPL----RLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDP-------- 63
DIL++TPL L L L V LV DEAD L +DP
Sbjct: 334 TDILVTTPLIFLHALSLGSTDDHAPLPTVRTLVFDEADVL---------LDPLFRDQTLG 384
Query: 64 VVKACSNPSIVRSLFSATLPDFVEELARSIMH------------DAVRVIVGRKNTASES 111
+ +C NP++ +L+SAT+ +E LA S + + +R++VG K++A +
Sbjct: 385 IWNSCINPNLRVTLWSATMGSNIETLASSTIQTRQEKLGLEKHSNLIRLVVGLKDSAIPN 444
Query: 112 IKQKLVFAGSEEGKLLALRQ---------SFAESLNPPVLIFVQSKDRAKELYGELAFD- 161
I +L++A +E GKL+ALRQ ESL PP L+F Q+ RA L+ EL +D
Sbjct: 445 ITHRLIYAATEPGKLIALRQLLRPTAKTTDGTESLRPPFLVFTQTISRAIALHAELLYDI 504
Query: 162 ------DIRAGVIHSDLSQT 175
R V+HSDLS +
Sbjct: 505 PAEAGGSTRIAVLHSDLSDS 524
>gi|357613478|gb|EHJ68531.1| hypothetical protein KGM_00706 [Danaus plexippus]
Length = 757
Score = 90.5 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 61/162 (37%), Positives = 89/162 (54%), Gaps = 9/162 (5%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKA-CSN--PSI 73
+I++ TP R+ ++ K +L RV YLVLDEAD++F++G +P V++ CS+ P
Sbjct: 383 EIVVGTPGRVIDLVKCKATNLQRVTYLVLDEADRMFDMG-----FEPQVRSICSHVRPER 437
Query: 74 VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 133
LFSAT P VE LAR +HD VRV G AS+ +KQ++ E K L ++
Sbjct: 438 QALLFSATFPRRVERLARDALHDPVRVQHGAAGEASKLVKQRVTIFNKPEEKWPWLLENL 497
Query: 134 AESLNP-PVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ L+ VLIFV K A++ L A ++H DL Q
Sbjct: 498 VDFLSSGSVLIFVTKKLEAEQTAANLGVQQYDALLLHGDLEQ 539
>gi|302499710|ref|XP_003011850.1| hypothetical protein ARB_01829 [Arthroderma benhamiae CBS 112371]
gi|291175404|gb|EFE31210.1| hypothetical protein ARB_01829 [Arthroderma benhamiae CBS 112371]
Length = 779
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 102/201 (50%), Gaps = 49/201 (24%)
Query: 16 CDILISTPLRLRLAI----RRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDP-------- 63
DIL++TPL L A+ + + VE L+LDEAD L +DP
Sbjct: 401 SDILVTTPLLLVNALSDNGHEELASMPLVESLILDEADVL---------LDPLFRDQTLK 451
Query: 64 VVKACSNPSIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASES 111
+ ++C NP + L+SAT+ +EELA++ + + VR++VG K++A +
Sbjct: 452 IWQSCVNPRLRVGLWSATMGSNIEELAKATIGERQKALGLKEESSLVRLVVGLKDSAIPN 511
Query: 112 IKQKLVFAGSEEGKLLALRQ---------SFAESLNPPVLIFVQSKDRAKELYGELAFD- 161
I KL +A +E+GKLL LRQ S + L PP ++F Q+ RA L+ EL +D
Sbjct: 512 ISHKLTYAATEQGKLLGLRQLLHPTTATASAGKHLRPPFIVFTQTIPRAVALHSELMYDI 571
Query: 162 ------DIRAGVIHSDLSQTQ 176
R V+HS+LS +Q
Sbjct: 572 PPEAGGSSRIAVLHSELSDSQ 592
>gi|168053931|ref|XP_001779387.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669185|gb|EDQ55777.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 741
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 92/169 (54%), Gaps = 13/169 (7%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-- 70
K C+++++TP RL I+ K + + R YLVLDEAD++F++G +P +++
Sbjct: 355 KAGCEVVVATPGRLIDMIKMKALSMHRATYLVLDEADRMFDLG-----FEPQIRSIVGQI 409
Query: 71 -PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK---L 126
P LFSAT+P VE LAR I+ D +RV VG +A+E I Q + S+ K L
Sbjct: 410 RPDRQTLLFSATMPKRVERLAREILTDPIRVTVGEIGSANEDITQVVTVLPSDAEKTPWL 469
Query: 127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
L Q F + + VL+F +K R +EL G+++ + +H D Q
Sbjct: 470 LDRLQPFVDDGD--VLVFASTKLRVEELEGKISEAGFKVAALHGDKDQA 516
>gi|405969088|gb|EKC34097.1| ATP-dependent RNA helicase DDX42 [Crassostrea gigas]
Length = 788
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 93/176 (52%), Gaps = 9/176 (5%)
Query: 5 LVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPV 64
+ T + +I+++TP RL ++++ +L RV YLV DEAD++F++G +P
Sbjct: 410 MWEQTKACQEGAEIIVATPGRLIDLVKKRATNLERVTYLVFDEADRMFDMG-----FEPQ 464
Query: 65 VKACSN---PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGS 121
V++ +N P LFSAT VE+LAR I+ D VRV+ G A+E I Q +
Sbjct: 465 VRSIANHVRPDRQTMLFSATFRKKVEKLARDILLDPVRVVQGEAGEANEDITQVVEVLPL 524
Query: 122 EEGKLLALRQSFAE-SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
K L + E + VLIFV K A+EL L D + G++H D+SQ +
Sbjct: 525 GPAKWTWLIKRLVEFTTIGSVLIFVTRKANAEELATNLRARDFKIGLLHGDMSQME 580
>gi|386015150|ref|YP_005933429.1| putative ATP-dependent RNA helicase RhlE [Pantoea ananatis AJ13355]
gi|386080118|ref|YP_005993643.1| putative ATP-dependent RNA helicase RhlE [Pantoea ananatis PA13]
gi|327393211|dbj|BAK10633.1| putative ATP-dependent RNA helicase RhlE [Pantoea ananatis AJ13355]
gi|354989299|gb|AER33423.1| putative ATP-dependent RNA helicase RhlE [Pantoea ananatis PA13]
Length = 449
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 90/164 (54%), Gaps = 7/164 (4%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + + +DLS+VE LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDILVATPGRLLDLVHQNAVDLSQVEVLVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 73 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
R LFSAT D ++ LA ++H+ +V V R+NTASE + Q++ F + + L L
Sbjct: 179 AKRQNLLFSATFSDEIKTLAEKLLHNPEQVEVARRNTASEQVSQQVHFVDKKRKREL-LS 237
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
Q E VL+F ++K A L +L D I A IH + SQ
Sbjct: 238 QLIGEGNWQQVLVFTRTKHGANHLAEQLGKDGITAAAIHGNKSQ 281
>gi|378768016|ref|YP_005196486.1| ATP-dependent RNA helicase RhlE [Pantoea ananatis LMG 5342]
gi|365187499|emb|CCF10449.1| ATP-dependent RNA helicase RhlE [Pantoea ananatis LMG 5342]
Length = 449
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 90/164 (54%), Gaps = 7/164 (4%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + + +DLS+VE LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDILVATPGRLLDLVHQNAVDLSQVEVLVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 73 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
R LFSAT D ++ LA ++H+ +V V R+NTASE + Q++ F + + L L
Sbjct: 179 AKRQNLLFSATFSDEIKTLAEKLLHNPEQVEVARRNTASEQVSQQVHFVDKKRKREL-LS 237
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
Q E VL+F ++K A L +L D I A IH + SQ
Sbjct: 238 QLIGEGNWQQVLVFTRTKHGANHLAEQLGKDGITAAAIHGNKSQ 281
>gi|402082038|gb|EJT77183.1| hypothetical protein GGTG_07095 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 685
Score = 89.7 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 55/167 (32%), Positives = 97/167 (58%), Gaps = 8/167 (4%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R ++ L ++YL+LDEAD++ ++G I +V+ P++
Sbjct: 329 CDLLVATPGRLVDLIERGRVSLCNIKYLILDEADRMLDMG-FEPQIRRIVEGEDMPNVND 387
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK---LLAL 129
+FSAT P+++++LAR + D V + VGR + SE+I Q+++ ++ K L+ L
Sbjct: 388 RQTLMFSATFPEYIQKLARDFLKDYVFLSVGRVGSTSENITQRVIEVHGKDDKDSFLIDL 447
Query: 130 RQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
++ E+ L+FV++K A EL L ++ A IH D +Q +
Sbjct: 448 LENDKET-GGLTLVFVETKRNADELSYFLQNRNLPATAIHGDRTQRE 493
>gi|448107108|ref|XP_004200911.1| Piso0_003521 [Millerozyma farinosa CBS 7064]
gi|448110113|ref|XP_004201542.1| Piso0_003521 [Millerozyma farinosa CBS 7064]
gi|359382333|emb|CCE81170.1| Piso0_003521 [Millerozyma farinosa CBS 7064]
gi|359383098|emb|CCE80405.1| Piso0_003521 [Millerozyma farinosa CBS 7064]
Length = 635
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 91/165 (55%), Gaps = 5/165 (3%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
CD+L++TP RL+ + R ++ L+ ++YLVLDEAD++ ++G I +V+ C P +
Sbjct: 294 GCDLLVATPGRLKDLLERGRVSLANIKYLVLDEADRMLDMG-FEPQIRHIVQECDMPPVE 352
Query: 75 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
+FSAT P ++ LAR + D + + VGR + SE+I QK+++ EE K + L
Sbjct: 353 DRQTLMFSATFPRDIQILARDFLKDYIFLSVGRVGSTSENITQKILYVEDEEKKSVLL-D 411
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + N +IF ++K A L L A IH D SQ +
Sbjct: 412 ILSANDNGLTIIFTETKRMADNLADFLYDQGFPATAIHGDRSQYE 456
>gi|451846393|gb|EMD59703.1| hypothetical protein COCSADRAFT_164584 [Cochliobolus sativus
ND90Pr]
Length = 744
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 102/203 (50%), Gaps = 54/203 (26%)
Query: 18 ILISTPLRLRLAIRRKK---IDLSRVEYLVLDEADKLFEVGNLLKHIDPVVK-------- 66
IL+STPL L +++R+ ++ + LVLDEAD L +DP+ +
Sbjct: 373 ILVSTPLALVNSLKRRDGAVANIPSISQLVLDEADVL---------LDPLFREQTLAAWN 423
Query: 67 ACSNPSIVRSLFSATLPDFVEELARSIMHDA-----------------VRVIVGRKNTAS 109
AC+NPS+ L+SAT+ +E LA S ++D +R++VG K++A
Sbjct: 424 ACTNPSLRVGLWSATMGSNIESLAISTLNDRWSALSLSQSALPPRPPLIRLVVGLKDSAI 483
Query: 110 ESIKQKLVFAGSEEGKLLALRQ----------SFAESLNPPVLIFVQSKDRAKELYGELA 159
+I +L +A +E+GKLL LRQ S L PP L+F Q+ RA L+ EL
Sbjct: 484 PNISHQLTYAATEQGKLLGLRQLLHPTALHIDSSQPILRPPFLVFTQTIPRAIALHSELL 543
Query: 160 FD-------DIRAGVIHSDLSQT 175
+D R V+H+DLS +
Sbjct: 544 YDIPPEAGGSSRIAVLHADLSSS 566
>gi|409123261|ref|ZP_11222656.1| DEAD/DEAH box helicase [Gillisia sp. CBA3202]
Length = 632
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 95/170 (55%), Gaps = 19/170 (11%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG------NLLKHIDPVVKAC 68
I+++TP R++ I+RK +++S++EY +LDEAD++ +G N+L H P K+
Sbjct: 122 GAQIIVATPGRMQDMIKRKLVNISQLEYCILDEADEMLNMGFFEDITNILSHT-PQEKST 180
Query: 69 SNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLA 128
LFSAT+P V +A+ MHD V + VG KN ++ ++ + + + + A
Sbjct: 181 -------WLFSATMPREVATIAKKFMHDPVEITVGNKNESTTNVSHEYYLVNTRD-RYAA 232
Query: 129 LRQSFAESLNPPV--LIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
LR+ A++ NP + +IF ++K +++ L D A IH DLSQ Q
Sbjct: 233 LRR-LADA-NPDIFSVIFCRTKRDTQKVAENLVEDGYSAAAIHGDLSQNQ 280
>gi|383857449|ref|XP_003704217.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Megachile
rotundata]
Length = 774
Score = 89.4 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 57/165 (34%), Positives = 93/165 (56%), Gaps = 10/165 (6%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSI 73
+I+++TP R+ ++ K +L+RV +LVLDEAD++F++G +P V++ N P
Sbjct: 380 EIVVATPGRIIDLVKMKATNLTRVTFLVLDEADRMFDMG-----FEPQVRSICNHVRPDR 434
Query: 74 VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQK-LVFAGSEEGKLLALRQS 132
LFSAT VE+LAR ++ D VR++ G A+ + Q +VF + GK L Q+
Sbjct: 435 QTLLFSATFKKRVEKLARDVLTDPVRIVQGDVGEANADVTQHVIVFNNNPTGKWTWLLQN 494
Query: 133 FAESLNP-PVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E L+ +LIFV K A+EL L ++ ++H D+ Q +
Sbjct: 495 LVEFLSAGSLLIFVTKKLNAEELANNLKLKELDVLLLHGDMDQIE 539
>gi|453085928|gb|EMF13970.1| DEAD-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 706
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 106/202 (52%), Gaps = 51/202 (25%)
Query: 16 CDILISTPLRLRLAIRRKKID----LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS-- 69
DIL+STP L ++ D LS V YL+LDEAD L +DP+ + +
Sbjct: 330 SDILVSTPGVLASMLQDAHRDSCSALSEVRYLILDEADVL---------LDPLFREQTLS 380
Query: 70 ------NPSIVRSLFSATLPDFVEELARSIMHDA--------------VRVIVGRKNTAS 109
++ SL+SAT+ +EELARS+M + +R++VG K++A
Sbjct: 381 IWNRLPRKNLRASLWSATMGSNIEELARSVMRERWIRLNQDETAEAPLIRLVVGLKDSAV 440
Query: 110 ESIKQKLVFAGSEEGKLLALRQ------SFAES---LNPPVLIFVQSKDRAKELYGELAF 160
+I+ KLV+A SE+GKL+ LR + A+S L PP L+F Q+ +RA L+ EL +
Sbjct: 441 PNIEHKLVYAASEQGKLMGLRNLLHPATTSADSGPPLLPPFLVFTQTIERAIALHSELLY 500
Query: 161 D-DIRAG------VIHSDLSQT 175
D AG V+HSDLS T
Sbjct: 501 DIPAEAGGISRIAVLHSDLSDT 522
>gi|350426308|ref|XP_003494399.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Bombus impatiens]
Length = 774
Score = 89.4 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 57/165 (34%), Positives = 92/165 (55%), Gaps = 10/165 (6%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSI 73
+I+++TP R+ ++ K +L+RV +LVLDEAD++F++G +P V++ N P
Sbjct: 380 EIVVATPGRMIDLVKMKATNLTRVTFLVLDEADRMFDMG-----FEPQVRSICNHVRPDR 434
Query: 74 VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQK-LVFAGSEEGKLLALRQS 132
LFSAT VE+LAR ++ D VR++ G A+ + Q +VF + GK L Q+
Sbjct: 435 QTLLFSATFKKRVEKLARDVLTDPVRIVQGDVGEANADVTQHVIVFNNNPTGKWTWLLQN 494
Query: 133 FAESLNP-PVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E L+ +LIFV K A+EL L + ++H D+ Q +
Sbjct: 495 LVEFLSSGSLLIFVTKKLNAEELANNLKLKEFDVMLLHGDMDQIE 539
>gi|291616785|ref|YP_003519527.1| RhlE [Pantoea ananatis LMG 20103]
gi|291151815|gb|ADD76399.1| RhlE [Pantoea ananatis LMG 20103]
Length = 449
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 93/163 (57%), Gaps = 5/163 (3%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + + +DLS+VE LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDILVATPGRLLDLVHQNAVDLSQVEVLVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 73 IVRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
++ LFSAT D ++ LA ++H+ +V V R+NTASE + Q++ F + + L L Q
Sbjct: 180 KRQNLLFSATFSDEIKTLAEKLLHNPEQVEVARRNTASEQVSQQVHFVDKKRKREL-LSQ 238
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
E VL+F ++K A L +L D I A IH + SQ
Sbjct: 239 LIGEGNWQQVLVFTRTKHGANHLAEQLGKDGITAAAIHGNKSQ 281
>gi|340723638|ref|XP_003400196.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Bombus
terrestris]
Length = 774
Score = 89.4 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 57/165 (34%), Positives = 92/165 (55%), Gaps = 10/165 (6%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSI 73
+I+++TP R+ ++ K +L+RV +LVLDEAD++F++G +P V++ N P
Sbjct: 380 EIVVATPGRMIDLVKMKATNLTRVTFLVLDEADRMFDMG-----FEPQVRSICNHVRPDR 434
Query: 74 VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQK-LVFAGSEEGKLLALRQS 132
LFSAT VE+LAR ++ D VR++ G A+ + Q +VF + GK L Q+
Sbjct: 435 QTLLFSATFKKRVEKLARDVLTDPVRIVQGDVGEANADVTQHVIVFNNNPTGKWTWLLQN 494
Query: 133 FAESLNP-PVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E L+ +LIFV K A+EL L + ++H D+ Q +
Sbjct: 495 LVEFLSSGSLLIFVTKKLNAEELANNLKLKEFDVMLLHGDMDQIE 539
>gi|50549245|ref|XP_502093.1| YALI0C21472p [Yarrowia lipolytica]
gi|74659998|sp|Q6CB69.1|DED1_YARLI RecName: Full=ATP-dependent RNA helicase DED1
gi|49647960|emb|CAG82413.1| YALI0C21472p [Yarrowia lipolytica CLIB122]
Length = 618
Score = 89.4 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 58/163 (35%), Positives = 89/163 (54%), Gaps = 7/163 (4%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++ P RL I R K+ L ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 295 CDLLVAAPGRLVDLIDRGKVSLENIKYLVLDEADRMLDMG-FEPQIRAIVQGSGMPDVNE 353
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEG-KLLALRQ 131
+FSAT P ++ LAR + D + + VGR + SE+I QK+ + E+G K+ AL
Sbjct: 354 RQTLMFSATFPRNIQMLARDFLKDYIFLSVGRVGSTSENITQKVEYV--EDGDKISALLD 411
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ + L+FV++K A L L +D A IH D SQ
Sbjct: 412 ILSAAGKGLTLVFVETKRGADYLCDVLQSEDFPATSIHGDRSQ 454
>gi|154320412|ref|XP_001559522.1| hypothetical protein BC1G_01678 [Botryotinia fuckeliana B05.10]
gi|347838811|emb|CCD53383.1| similar to ATP-dependent RNA helicase rok1 [Botryotinia fuckeliana]
Length = 719
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 96/200 (48%), Gaps = 49/200 (24%)
Query: 16 CDILISTPL----RLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDP-------- 63
DIL++TPL L L L V LV DEAD L +DP
Sbjct: 332 TDILVTTPLIFLHALSLGSSDSHAPLPTVRTLVFDEADVL---------LDPLFREQTLG 382
Query: 64 VVKACSNPSIVRSLFSATLPDFVEELARSIMH------------DAVRVIVGRKNTASES 111
+ +C NP + +L+SAT+ +E LA + + + VR++VG K++A +
Sbjct: 383 IWNSCINPDLRVTLWSATMGSNIETLASATIQARQEKLGLEKHSNLVRLVVGLKDSAIPN 442
Query: 112 IKQKLVFAGSEEGKLLALRQ---------SFAESLNPPVLIFVQSKDRAKELYGELAFD- 161
I +L++A +E GKL+ALRQ ESL PP L+F Q+ RA L+ EL +D
Sbjct: 443 ITHRLIYAATEPGKLIALRQLLRPTAKTTDGTESLRPPFLVFTQTIPRAIALHAELLYDI 502
Query: 162 ------DIRAGVIHSDLSQT 175
R V+HSDLS +
Sbjct: 503 PAEAGGSTRIAVLHSDLSDS 522
>gi|406701477|gb|EKD04620.1| ATP-dependent RNA helicase ded1 [Trichosporon asahii var. asahii
CBS 8904]
Length = 705
Score = 89.4 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 57/164 (34%), Positives = 88/164 (53%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L +TP RL I R +I L+ V+YLVLDEAD++ ++G I +V+ P +
Sbjct: 436 CDLLSATPGRLVDLIERGRISLANVKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPDVQN 494
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LARS + D + + VGR + SE+I Q++ + + + L L
Sbjct: 495 RQTLMFSATFPKEIQMLARSFLKDYIFLSVGRVGSTSENITQRIEYVDEHDKRSLLLDLL 554
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
AE +L+FV++K A L L A IH D +Q +
Sbjct: 555 LAEQSGGLILVFVETKRMADSLCDFLCSQQHNATSIHGDRTQRE 598
>gi|401887224|gb|EJT51224.1| ATP-dependent RNA helicase ded1 [Trichosporon asahii var. asahii
CBS 2479]
Length = 573
Score = 89.4 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 57/164 (34%), Positives = 88/164 (53%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L +TP RL I R +I L+ V+YLVLDEAD++ ++G I +V+ P +
Sbjct: 304 CDLLSATPGRLVDLIERGRISLANVKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPDVQN 362
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LARS + D + + VGR + SE+I Q++ + + + L L
Sbjct: 363 RQTLMFSATFPKEIQMLARSFLKDYIFLSVGRVGSTSENITQRIEYVDEHDKRSLLLDLL 422
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
AE +L+FV++K A L L A IH D +Q +
Sbjct: 423 LAEQSGGLILVFVETKRMADSLCDFLCSQQHNATSIHGDRTQRE 466
>gi|406602489|emb|CCH45957.1| ATP-dependent RNA helicase [Wickerhamomyces ciferrii]
Length = 644
Score = 89.0 bits (219), Expect = 6e-16, Method: Composition-based stats.
Identities = 56/164 (34%), Positives = 90/164 (54%), Gaps = 5/164 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL + R I L ++YLVLDEAD++ ++G I +V+ C P +
Sbjct: 295 CDLLVATPGRLNDLLERGVISLRNIKYLVLDEADRMLDMG-FEPQIRHIVQECDMPPVEE 353
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + D + + VG+ + SE+I QK+++ +E + + L
Sbjct: 354 RQTLMFSATFPTDIQMLARDFLKDYIFLSVGKVGSTSENITQKVLYVEDDEKRSVLLDIL 413
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
A+ N LIFV++K A L L + A IH D +Q +
Sbjct: 414 SADE-NGLTLIFVETKRMADALSDFLINTNFPATSIHGDRTQNE 456
>gi|390448328|ref|ZP_10233949.1| DEAD/DEAH box helicase [Nitratireductor aquibiodomus RA22]
gi|389666297|gb|EIM77749.1| DEAD/DEAH box helicase [Nitratireductor aquibiodomus RA22]
Length = 453
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 96/161 (59%), Gaps = 3/161 (1%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
DIL++TP RL +R ++ L+ +LVLDEAD++ ++G + + + +A ++P+
Sbjct: 133 GVDILVATPGRLTDIVRSGELSLAETRWLVLDEADRMLDMG-FINDVRRIARA-THPARQ 190
Query: 75 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
+LFSAT+P VE LA+S+++D +RV + +++T + I Q LV A +++ + + L A
Sbjct: 191 TALFSATMPKEVEGLAQSLLNDPLRVEIAKQSTTAGEITQHLVMARTKQKRKI-LSDMLA 249
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
+ V++F ++K A + +L D A VIH + SQ
Sbjct: 250 DEAMRSVIVFARTKHGADRVTRDLERDGFEAAVIHGNKSQN 290
>gi|317052319|ref|YP_004113435.1| DEAD/DEAH box helicase domain-containing protein
[Desulfurispirillum indicum S5]
gi|316947403|gb|ADU66879.1| DEAD/DEAH box helicase domain protein [Desulfurispirillum indicum
S5]
Length = 457
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 94/164 (57%), Gaps = 9/164 (5%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG---NLLKHIDPVVKACSNP 71
DI+++TP RL +++K IDLS+VE+LVLDEAD++ ++G ++ K + + K N
Sbjct: 123 GVDIVVATPGRLLDHVQQKSIDLSKVEFLVLDEADRMLDMGFIHDIRKVLALLPKERQN- 181
Query: 72 SIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
LFSAT + ELA S M D V+V V R+NTA+E++ Q + E + L L +
Sbjct: 182 ----LLFSATFSREITELASSFMKDPVQVEVARRNTAAETVDQVVHLVDRERKREL-LSK 236
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
+E VL+F ++K A L +L D I + IH + SQ+
Sbjct: 237 LISEGKWQQVLVFTRTKHGANRLAQQLEKDGIHSAAIHGNKSQS 280
>gi|290994831|ref|XP_002680035.1| ATP-dependent RNA helicase [Naegleria gruberi]
gi|284093654|gb|EFC47291.1| ATP-dependent RNA helicase [Naegleria gruberi]
Length = 629
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 90/164 (54%), Gaps = 8/164 (4%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI- 73
CDIL++TP RL I R I L V+YLVLDEAD++ ++G I +V+ P+
Sbjct: 286 GCDILVATPGRLVDLIDRGSISLHNVQYLVLDEADRMLDMG-FEPQIRYIVEKTGMPAPG 344
Query: 74 --VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
+ +FSAT P ++ LAR +H+ + + VGR + E+I QK V+ +E + L L
Sbjct: 345 QRITLMFSATFPKNIQTLARDFLHNNLNLTVGRVGSTHENILQKFVYCKDDEKRDLMLEA 404
Query: 132 -SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ E+L L+FV++K A L L + ++ IH D +Q
Sbjct: 405 IASVETL---TLVFVKTKKEASILEYFLMKNGFKSSSIHGDKTQ 445
>gi|392576732|gb|EIW69862.1| hypothetical protein TREMEDRAFT_43516 [Tremella mesenterica DSM
1558]
Length = 645
Score = 89.0 bits (219), Expect = 8e-16, Method: Composition-based stats.
Identities = 57/164 (34%), Positives = 90/164 (54%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L +TP RL I R KI LS ++YLVLDEAD++ ++G I +V+ P +++
Sbjct: 305 CDMLSATPGRLVDLIERGKISLSNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPGVMQ 363
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR+ + + + + VGR + SE+I Q++ + + + L L
Sbjct: 364 RQTLMFSATFPKEIQLLARTFLKEYIFLSVGRVGSTSENITQRVEYVDDHDKRSLLLDLL 423
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
AE VL+FV++K A L L A IH D +Q +
Sbjct: 424 LAEESGGLVLVFVETKRMADNLCDFLCAQRHNATSIHGDRTQRE 467
>gi|189197063|ref|XP_001934869.1| ATP-dependent RNA helicase ROK1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187980817|gb|EDU47443.1| ATP-dependent RNA helicase ROK1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 737
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 107/219 (48%), Gaps = 56/219 (25%)
Query: 2 KKELVRSTDLSKFSCDILISTPLRLRLAIRRKK---IDLSRVEYLVLDEADKLFEVGNLL 58
KK+ R +L K + IL++TPL + A++R+ +L V LVLDEAD L
Sbjct: 338 KKQAGRRAELVKAA--ILVATPLAILNALKRRDGTVANLPSVSQLVLDEADVL------- 388
Query: 59 KHIDPVVK--------ACSNPSIVRSLFSATLPDFVEELARSIMHDA------------- 97
+DP+ + ACSNP + L+SAT+ +E L S ++
Sbjct: 389 --LDPLFRDQTLALWNACSNPKLRIGLWSATMGSNIESLTISTLNSRWTTLSSSQLSLPP 446
Query: 98 ----VRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ----------SFAESLNPPVLI 143
+R++VG K++A +I +L +A +E GKLL LRQ S +L PP L+
Sbjct: 447 RPPLIRLVVGLKDSAIPNITHQLTYAATEPGKLLGLRQLLHPTAVSTSSTQPTLRPPFLV 506
Query: 144 FVQSKDRAKELYGELAFD-------DIRAGVIHSDLSQT 175
F Q+ RA L+ EL +D R V+H+DLS +
Sbjct: 507 FTQTIPRAIALHSELLYDIPPEAGGSTRIAVLHADLSSS 545
>gi|296808523|ref|XP_002844600.1| ATP-dependent RNA helicase ROK1 [Arthroderma otae CBS 113480]
gi|238844083|gb|EEQ33745.1| ATP-dependent RNA helicase ROK1 [Arthroderma otae CBS 113480]
Length = 740
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 100/201 (49%), Gaps = 49/201 (24%)
Query: 16 CDILISTPLRLRLAIRRKK----IDLSRVEYLVLDEADKLFEVGNLLKHIDP-------- 63
DILI+TPL+L A+ + V LVLDEAD L +DP
Sbjct: 362 SDILITTPLQLVNALSDNGHKVLASMPLVRSLVLDEADVL---------LDPLFRDQTLS 412
Query: 64 VVKACSNPSIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASES 111
+ ++C NP + L+SAT+ +EELA+S + + +R++VG K++A +
Sbjct: 413 IWRSCVNPRLRVGLWSATMGSNIEELAKSTIGERQKSLGLKEESFLIRLVVGLKDSAIPN 472
Query: 112 IKQKLVFAGSEEGKLLALRQ---------SFAESLNPPVLIFVQSKDRAKELYGELAFD- 161
I L +A +E+GKLL LRQ S ++ L PP +IF Q+ RA L+ EL +D
Sbjct: 473 ISHTLTYAATEQGKLLGLRQLLHPTTATASASKHLRPPFIIFTQTIPRAVALHSELMYDI 532
Query: 162 ------DIRAGVIHSDLSQTQ 176
R V+HS+LS Q
Sbjct: 533 PPEAGGSSRIAVLHSELSDYQ 553
>gi|254572872|ref|XP_002493545.1| ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase [Komagataella
pastoris GS115]
gi|238033344|emb|CAY71366.1| ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase [Komagataella
pastoris GS115]
gi|328354630|emb|CCA41027.1| ATP-dependent RNA helicase [Komagataella pastoris CBS 7435]
Length = 606
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 93/170 (54%), Gaps = 12/170 (7%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
CD+L++TP RL + R KI L++++YL+LDEAD++ ++G I +V+ C PS+
Sbjct: 272 GCDLLVATPGRLSDLLERGKISLAKIKYLILDEADRMLDMG-FEPQIRHIVQGCDMPSVN 330
Query: 75 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK-----L 126
+FSAT P ++ LA+ + D + + VGR + SE+I Q+++ +E K +
Sbjct: 331 ERHTLMFSATFPRDIQLLAKDFLKDYIFLSVGRVGSTSENITQRVLSVEDDEKKSVLLDI 390
Query: 127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L+ E L LIFV++K A L L + A IH D +Q +
Sbjct: 391 LSSSDDIKEGL---TLIFVETKRMADTLSHFLVTRNFPATSIHGDRTQQE 437
>gi|58259441|ref|XP_567133.1| ATP-dependent RNA helicase ded1 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134107531|ref|XP_777650.1| hypothetical protein CNBA7700 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338818068|sp|P0CQ75.1|DED1_CRYNB RecName: Full=ATP-dependent RNA helicase ded1
gi|338818069|sp|P0CQ74.1|DED1_CRYNJ RecName: Full=ATP-dependent RNA helicase ded1
gi|50260344|gb|EAL23003.1| hypothetical protein CNBA7700 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223270|gb|AAW41314.1| ATP-dependent RNA helicase ded1, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 637
Score = 88.6 bits (218), Expect = 9e-16, Method: Composition-based stats.
Identities = 57/164 (34%), Positives = 89/164 (54%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L +TP RL I R KI L+ V+YLVLDEAD++ ++G I +V P ++
Sbjct: 298 CDLLSATPGRLVDLIERGKISLANVKYLVLDEADRMLDMG-FEPQIRRIVDEEDMPGVLE 356
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LARS + + + + VGR + SE+I Q++ + ++ + L L
Sbjct: 357 RQTLMFSATFPREIQNLARSFLKEYIFLTVGRVGSTSENITQRVEYVDDQDKRSLLLDLL 416
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
AE +L+FV++K A L L A IH D +Q +
Sbjct: 417 LAEQSGGLILVFVETKRMADTLCDFLCSRRHNATSIHGDRTQRE 460
>gi|340382274|ref|XP_003389645.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Amphimedon
queenslandica]
Length = 704
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 89/166 (53%), Gaps = 9/166 (5%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-- 70
K C+IL++TP RL ++ K +L RV +LV DEAD++F++G +P V++ +N
Sbjct: 343 KEGCEILVATPGRLIDLVKLKATNLQRVTFLVFDEADRMFDLG-----FEPQVRSIANHV 397
Query: 71 -PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 129
P LFSAT VE+L R I+ D VR+++G A+ I Q + K + L
Sbjct: 398 RPDRQTLLFSATFRKKVEKLCRDILTDPVRIVIGDLGEANTDITQIASVFKDAQTKWVWL 457
Query: 130 RQSFAESLNP-PVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
Q E L+ VL+F K ++EL L +AG++H D+ Q
Sbjct: 458 AQHLVEFLSAGSVLVFCTKKTGSEELAHNLRQSGYQAGLLHGDMCQ 503
>gi|262340963|ref|YP_003283818.1| ATP-dependent RNA helicase [Blattabacterium sp. (Blattella
germanica) str. Bge]
gi|262272300|gb|ACY40208.1| ATP-dependent RNA helicase [Blattabacterium sp. (Blattella
germanica) str. Bge]
Length = 551
Score = 88.6 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 58/162 (35%), Positives = 93/162 (57%), Gaps = 8/162 (4%)
Query: 18 ILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS- 76
I+I TP R+ I+RKK+ L +++YL+LDEAD++ +G + +D +VK P +S
Sbjct: 127 IIIGTPGRIIDLIKRKKLHLEKIKYLILDEADEMLNMG-FKEELDYIVKML--PKNRQSL 183
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
LFSAT+ ++ +AR+ + D V +I G+KN S+ +K G K AL++
Sbjct: 184 LFSATMSKYMNAIARTYLTDPVEIIAGQKNIVSDGVKHIYYMVGHLNKKYSALKRIV--D 241
Query: 137 LNPPV--LIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+NP + +IF ++K KE+ L D A ++ DLSQTQ
Sbjct: 242 INPGIYGIIFCETKKETKEIAEYLIKDGYNADALYGDLSQTQ 283
>gi|66522071|ref|XP_624210.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Apis mellifera]
Length = 772
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 57/165 (34%), Positives = 92/165 (55%), Gaps = 10/165 (6%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSI 73
+I+++TP R+ ++ K +L+RV +LVLDEAD++F++G +P V++ N P
Sbjct: 380 EIVVATPGRIIDLVKMKATNLTRVTFLVLDEADRMFDMG-----FEPQVRSICNHVRPDR 434
Query: 74 VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQK-LVFAGSEEGKLLALRQS 132
LFSAT VE+LAR ++ D VR++ G A+ + Q +VF + GK L Q+
Sbjct: 435 QTLLFSATFKKRVEKLARDVLTDPVRIVQGDVGEANADVTQHVIVFNNNPTGKWTWLLQN 494
Query: 133 FAESLNP-PVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E L+ +LIFV K A+EL L + ++H D+ Q +
Sbjct: 495 LIEFLSAGSLLIFVTKKLNAEELANNLKLKEFDVLLLHGDMDQIE 539
>gi|405118165|gb|AFR92940.1| ATP-dependent RNA helicase ded1 [Cryptococcus neoformans var.
grubii H99]
Length = 637
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 57/164 (34%), Positives = 89/164 (54%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L +TP RL I R KI L+ V+YLVLDEAD++ ++G I +V P ++
Sbjct: 298 CDLLSATPGRLVDLIERGKISLANVKYLVLDEADRMLDMG-FEPQIRRIVDEEDMPGVLD 356
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LARS + + + + VGR + SE+I Q++ + ++ + L L
Sbjct: 357 RQTLMFSATFPREIQNLARSFLKEYIFLTVGRVGSTSENITQRVEYVDDQDKRSLLLDLL 416
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
AE +L+FV++K A L L A IH D +Q +
Sbjct: 417 LAEQSGGLILVFVETKRMADTLCDFLCSRRHNATSIHGDRTQRE 460
>gi|402223504|gb|EJU03568.1| DEAD-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 644
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 58/164 (35%), Positives = 86/164 (52%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L +TP RL I R +I L+ V YLVLDEAD++ ++G I +V+ P +
Sbjct: 303 CDLLSATPGRLVDLIERGRISLANVRYLVLDEADRMLDMG-FEPQIRRIVQGEDMPDVNH 361
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LA+ + D + + VGR + SE+I Q++ F + + L
Sbjct: 362 RQTLMFSATFPRDIQMLAKEFLKDYIFLSVGRVGSTSENITQRIEFVEDHDKRSYLLDIL 421
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
AE N LIFV++K A L L I A IH D +Q +
Sbjct: 422 TAEGQNGLTLIFVETKRMADMLSDFLMGSSIPATSIHGDRTQRE 465
>gi|149372587|ref|ZP_01891699.1| ATP-dependent RNA helicase, DEAD/DEAH box family protein
[unidentified eubacterium SCB49]
gi|149354630|gb|EDM43194.1| ATP-dependent RNA helicase, DEAD/DEAH box family protein
[unidentified eubacterium SCB49]
Length = 626
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 95/172 (55%), Gaps = 19/172 (11%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG------NLLKHIDPVVK 66
K I+++TP R++ I R+ ID+S++EY VLDEAD++ +G +L H P K
Sbjct: 120 KKGAQIIVATPGRMKDMISRRMIDISKIEYCVLDEADEMLNMGFHEDITEILSH-SPQEK 178
Query: 67 ACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 126
+ LFSAT+P V +A+ M+ + VG KNT SE++ + + + +
Sbjct: 179 ST-------WLFSATMPREVASIAKEFMYQPQEITVGSKNTGSENVTHEYYLVNARD-RY 230
Query: 127 LALRQSFAESLNPPV--LIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
AL++ A++ NP + ++F ++K +++ +L D AG IH DLSQ Q
Sbjct: 231 QALKR-LADA-NPEIFSVVFCRTKRDTQKVAEQLIQDGYSAGAIHGDLSQNQ 280
>gi|380022612|ref|XP_003695134.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DDX42-like [Apis florea]
Length = 772
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 57/165 (34%), Positives = 92/165 (55%), Gaps = 10/165 (6%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSI 73
+I+++TP R+ ++ K +L+RV +LVLDEAD++F++G +P V++ N P
Sbjct: 380 EIVVATPGRIIDLVKMKATNLTRVTFLVLDEADRMFDMG-----FEPQVRSICNHVRPDR 434
Query: 74 VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQK-LVFAGSEEGKLLALRQS 132
LFSAT VE+LAR ++ D VR++ G A+ + Q +VF + GK L Q+
Sbjct: 435 QTLLFSATFKKRVEKLARDVLTDPVRIVQGDVGEANADVTQHVIVFNNNPTGKWTWLLQN 494
Query: 133 FAESLNP-PVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E L+ +LIFV K A+EL L + ++H D+ Q +
Sbjct: 495 LIEFLSAGSLLIFVTKKLNAEELANNLKLKEFDVLLLHGDMDQIE 539
>gi|384494853|gb|EIE85344.1| hypothetical protein RO3G_10054 [Rhizopus delemar RA 99-880]
Length = 654
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 54/164 (32%), Positives = 90/164 (54%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL + R ++ LS + YLVLDEAD++ ++G I +V+ + P +
Sbjct: 325 CDLLVATPGRLVDLLERARVSLSLIRYLVLDEADRMLDMG-FEPQIRRIVEKENMPGVEN 383
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + D + + VGR + SE+I QK+ + E+ + + L
Sbjct: 384 RNTLMFSATFPRDIQYLARDFLKDYIFLSVGRVGSTSENITQKIEYVEDEDKRSVLLDIL 443
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ ++ LIFV++K A L L + A IH D +Q +
Sbjct: 444 HSNEVSGLSLIFVETKRMADALSDFLLDHNFPATAIHGDRTQRE 487
>gi|402483737|gb|AFQ59989.1| RhlE [Photorhabdus luminescens]
Length = 428
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 92/164 (56%), Gaps = 7/164 (4%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + +DLSRVE LVLDEAD++ ++G + I V+ P
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVDLSRVEILVLDEADRMLDMG-FIHDIRRVLNKLP-PK 180
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSE-EGKLLALRQ 131
LFSAT D ++ LA ++HD V V V R+N+ASE I+Q + F + +G+LL+
Sbjct: 181 RQNLLFSATFSDDIKNLANKLLHDPVSVEVARRNSASEQIEQFVHFVDKKRKGELLSF-- 238
Query: 132 SFAESLN-PPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
S N VL+F ++K A L +L D + A IH + SQ
Sbjct: 239 -LIGSRNWQQVLVFTRTKHGANRLAEQLNKDGVTAAAIHGNKSQ 281
>gi|332025702|gb|EGI65860.1| ATP-dependent RNA helicase DDX42 [Acromyrmex echinatior]
Length = 752
Score = 87.8 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 55/165 (33%), Positives = 93/165 (56%), Gaps = 10/165 (6%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSI 73
+I+++TP R+ ++ K +L+RV +LVLDEAD++F++G +P V++ N P
Sbjct: 363 EIVVATPGRMIDLVKMKATNLTRVTFLVLDEADRMFDMG-----FEPQVRSICNHVRPDR 417
Query: 74 VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLV-FAGSEEGKLLALRQS 132
LFSAT VE+LAR ++ D +R++ G A+ + Q ++ F + GK L Q+
Sbjct: 418 QTLLFSATFKKKVEKLARDVLTDPIRIVQGDVGEANTDVTQHVIMFHNNPSGKWNWLLQN 477
Query: 133 FAESLNP-PVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ E L+ +LIFV K A+EL L + ++H D+ Q +
Sbjct: 478 YIEFLSAGSLLIFVTKKLNAEELANNLKLKEFEVLLLHGDMDQIE 522
>gi|242019547|ref|XP_002430222.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
gi|212515318|gb|EEB17484.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
Length = 763
Score = 87.8 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 54/164 (32%), Positives = 89/164 (54%), Gaps = 9/164 (5%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSI 73
+I+++TP R+ I+ K +L RV +LVLDEAD++F++G +P V++ N P
Sbjct: 394 EIVVATPGRMIDLIKMKATNLKRVTFLVLDEADRMFDMG-----FEPQVRSICNHVRPDR 448
Query: 74 VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 133
LFSAT VE LAR ++ D +R++ G A+E + Q ++ ++ K + L
Sbjct: 449 QTLLFSATFKKKVERLARVVLTDPIRIVQGDVGEANEDVIQNVLILPNQAAKFMWLTSHI 508
Query: 134 AESL-NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E L N +LIFV K A+E+ L + ++H D+ Q +
Sbjct: 509 VEFLSNGSLLIFVTKKVNAEEVANNLKLKEFDVLLLHGDMDQIE 552
>gi|326429718|gb|EGD75288.1| DEAD/H box polypeptide 3 [Salpingoeca sp. ATCC 50818]
Length = 710
Score = 87.8 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 58/169 (34%), Positives = 88/169 (52%), Gaps = 3/169 (1%)
Query: 10 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
DL + C +L++TP RL + R +I + + +LVLDEAD++ ++G + V +
Sbjct: 346 DLQR-GCQVLVATPGRLVDLLERGRIGMDAIRFLVLDEADRMLDMGFEPQIRRIVEQDTM 404
Query: 70 NPSIVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLL 127
P VR +FSAT P ++ LAR +HD V + VGR + +E+I QK+ + E +
Sbjct: 405 PPPGVRQTLMFSATFPKDIQVLARDFLHDCVSISVGRIGSTTENIFQKVYWVQEHEKRQT 464
Query: 128 ALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L A S VL+FV++K A L L A IH D +Q Q
Sbjct: 465 LLDLISAASEKELVLVFVETKRGADALEDFLIHQQFPASSIHGDRTQEQ 513
>gi|403223240|dbj|BAM41371.1| uncharacterized protein TOT_030000633 [Theileria orientalis strain
Shintoku]
Length = 511
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 83/158 (52%), Gaps = 19/158 (12%)
Query: 11 LSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG---------NLLKHI 61
++ F I ++TPL L + L +E LVLDEADKL E G N LK+
Sbjct: 212 ITTFDFSIAVATPLTLYKLMLEHPDMLDNLEMLVLDEADKLLEDGYHDNVDYVLNHLKNK 271
Query: 62 DPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGS 121
D V KAC FS+T+ + LA+S + V +G +N ++ Q+LV S
Sbjct: 272 DRVQKAC---------FSSTIQPELLVLAKSYFKSPIHVTIGSENVCCSNVHQELVCVTS 322
Query: 122 EEGKLLALRQSFAES-LNPPVLIFVQSKDRAKELYGEL 158
E+GK+L L+Q E L PP+LIF+QS R ELY EL
Sbjct: 323 EKGKILTLKQLINEGKLLPPILIFLQSIKRVNELYEEL 360
>gi|345487283|ref|XP_001603249.2| PREDICTED: ATP-dependent RNA helicase DDX42-like [Nasonia
vitripennis]
Length = 793
Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 56/165 (33%), Positives = 91/165 (55%), Gaps = 10/165 (6%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSI 73
+I+++TP R+ ++ K +LSRV +LVLDEAD++F++G +P V++ N P
Sbjct: 380 EIVVATPGRIIDLVKMKATNLSRVTFLVLDEADRMFDMG-----FEPQVRSICNHVRPDR 434
Query: 74 VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQK-LVFAGSEEGKLLALRQS 132
LFSAT +E+LAR + D +R++ G A+ + Q +VF + GK L Q+
Sbjct: 435 QTLLFSATFKKRIEKLARDALTDPIRIVQGDVGEANTDVTQHVIVFYKNPTGKWTWLNQN 494
Query: 133 FAESLNP-PVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E L+ +LIFV K A+EL L + ++H D+ Q +
Sbjct: 495 IVEYLSSGSLLIFVTKKLNAEELANNLKLKEYEVLLLHGDMDQVE 539
>gi|378579002|ref|ZP_09827673.1| RNA helicase [Pantoea stewartii subsp. stewartii DC283]
gi|377818357|gb|EHU01442.1| RNA helicase [Pantoea stewartii subsp. stewartii DC283]
Length = 449
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 92/163 (56%), Gaps = 5/163 (3%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + +DLS+VE LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDILVATPGRLLDLAHQNAVDLSQVEVLVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 73 IVRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
++ LFSAT D ++ LA ++H+ +V V R+NTASE + Q++ F + + L L Q
Sbjct: 180 KRQNLLFSATFSDEIKTLAEKLLHNPEQVEVARRNTASEQVSQQVHFVDKKRKREL-LSQ 238
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
E VL+F ++K A L +L D I A IH + SQ
Sbjct: 239 LIGEGNWQQVLVFTRTKHGANHLAEQLGKDGITAAAIHGNKSQ 281
>gi|156391127|ref|XP_001635620.1| predicted protein [Nematostella vectensis]
gi|156222716|gb|EDO43557.1| predicted protein [Nematostella vectensis]
Length = 518
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 89/166 (53%), Gaps = 13/166 (7%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---P 71
+I+++TP RL ++ K +L RV YLV DEAD++F++G +P V++ +N P
Sbjct: 229 GAEIVVATPGRLIDHVKAKATNLHRVTYLVFDEADRMFDMG-----FEPQVRSIANNVRP 283
Query: 72 SIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
LFSAT VE L R I+ D VRV++G A+E + Q + S K L Q
Sbjct: 284 DRQTLLFSATFKKKVEHLCRDILVDPVRVVIGELGEANEDVTQIVHIFNSMPSKWEWLTQ 343
Query: 132 ---SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
SFA + + VLIFV K ++EL L +D ++H D+ Q
Sbjct: 344 NLVSFASAGS--VLIFVTKKLNSEELATNLRKNDFEVALLHGDMDQ 387
>gi|406861712|gb|EKD14765.1| putative ATP-dependent RNA helicase rok1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 712
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 101/198 (51%), Gaps = 48/198 (24%)
Query: 17 DILISTP---LR-LRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVK------ 66
D+LI+TP LR L + + L V LVLDEAD L +DP+ +
Sbjct: 324 DMLITTPGLILRALSTSEPGRNHSLPSVRALVLDEADVL---------LDPLFRDQTLGI 374
Query: 67 --ACSNPSIVRSLFSATLPDFVEELARSIM-----------HDAVRVIVGRKNTASESIK 113
+C+NPS+ +L+SAT+ +E LA S + +R++VG K++A +I
Sbjct: 375 WSSCTNPSLRVTLWSATMGSNIEALASSTILSRRSSLSLPNTPIIRLVVGLKDSAIPNIT 434
Query: 114 QKLVFAGSEEGKLLALRQSF---------AESLNPPVLIFVQSKDRAKELYGELAFD--- 161
+LV+A +E GKLLALRQ A SL PP L+F Q+ RA L+ EL +D
Sbjct: 435 HRLVYAATEPGKLLALRQLLHPTAGSDPKAISLRPPFLVFTQTIPRAVALHAELLYDIPS 494
Query: 162 ----DIRAGVIHSDLSQT 175
R V+HSDLS +
Sbjct: 495 EAGGSSRIAVLHSDLSDS 512
>gi|330842567|ref|XP_003293247.1| hypothetical protein DICPUDRAFT_41749 [Dictyostelium purpureum]
gi|325076448|gb|EGC30233.1| hypothetical protein DICPUDRAFT_41749 [Dictyostelium purpureum]
Length = 551
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 88/171 (51%), Gaps = 15/171 (8%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG------NLLKHIDPVVK 66
K C+I++STP RL I+ K L+RV YLVLDEADK+F+ G +++ H+ P +
Sbjct: 229 KAGCEIVVSTPGRLIDMIKLKATKLNRVTYLVLDEADKMFDFGFGPQVLSIVNHVRPDRQ 288
Query: 67 ACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 126
LFSAT VE+ ARSI+ D +++ +G+ +A+ I Q + SE K
Sbjct: 289 TL--------LFSATFKQNVEDFARSILTDPIKISIGQAGSANSDITQIVQVLKSESEKW 340
Query: 127 LALRQSFAESLNP-PVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L + LN VLIFV K +EL L + IH D +Q +
Sbjct: 341 SWLIDNLPNLLNQGSVLIFVSMKASVEELSKNLTNFGFKTCSIHGDKNQYE 391
>gi|321250272|ref|XP_003191751.1| ATP-dependent RNA helicase ded1 [Cryptococcus gattii WM276]
gi|317458218|gb|ADV19964.1| ATP-dependent RNA helicase ded1, putative [Cryptococcus gattii
WM276]
Length = 644
Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 57/164 (34%), Positives = 89/164 (54%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L +TP RL I R KI L+ V+YLVLDEAD++ ++G I +V P ++
Sbjct: 298 CDLLSATPGRLVDLIERGKISLANVKYLVLDEADRMLDMG-FEPQIRRIVDEEDMPGVLD 356
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LARS + + + + VGR + SE+I Q++ + ++ + L L
Sbjct: 357 RQTLMFSATFPREIQNLARSFLKEYIFLTVGRVGSTSENITQRVEYVDDQDKRSLLLDLL 416
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
AE +L+FV++K A L L A IH D +Q +
Sbjct: 417 LAEQSGGLILVFVETKRMADTLCDFLCSRRHNATSIHGDRTQRE 460
>gi|240274438|gb|EER37954.1| ATP-dependent RNA helicase ROK1 [Ajellomyces capsulatus H143]
Length = 547
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 96/172 (55%), Gaps = 28/172 (16%)
Query: 16 CDILISTPLRLRLAIRRKK----IDLSRVEYLVLDEADKLFEVGNLLK-HIDPVVKACSN 70
DIL+STPL L ++ K L ++ LVLDEAD L + +L + V +AC+N
Sbjct: 370 SDILVSTPLLLANSLSGNKSRSIAPLPTIQSLVLDEADVLLD--SLFRDQTLGVWRACTN 427
Query: 71 PSIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASESIKQKLVF 118
+ L+SAT+ +EELA+S +++ VR++VG K+TA +I KLV+
Sbjct: 428 ARLRVGLWSATMGSSIEELAKSTINERRRSLGLRDESFLVRLVVGLKDTAIPNISHKLVY 487
Query: 119 AGSEEGKLLALRQ--------SFAES-LNPPVLIFVQSKDRAKELYGELAFD 161
A +E+GKLL LRQ S +++ L P L+F Q+ RA L+ EL +D
Sbjct: 488 AATEQGKLLGLRQLLNPKGASSTSDTHLRAPFLVFTQTISRAVALHSELKYD 539
>gi|255548421|ref|XP_002515267.1| hypothetical protein RCOM_1346600 [Ricinus communis]
gi|223545747|gb|EEF47251.1| hypothetical protein RCOM_1346600 [Ricinus communis]
Length = 791
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 89/166 (53%), Gaps = 9/166 (5%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-- 70
K CDI+++TP RL ++ K +++S+ YLVLDEAD++F++G +P +++
Sbjct: 345 KAGCDIVVATPGRLIDLLKMKALNMSKATYLVLDEADRMFDLG-----FEPQIRSIVGQI 399
Query: 71 -PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 129
P LFSAT+P VE+LAR I+ D +RV VG A+E I Q + S+ KL L
Sbjct: 400 RPDRQTLLFSATMPRKVEKLAREILSDPIRVTVGEVGMANEDITQVVQVIPSDAEKLPWL 459
Query: 130 RQSFAESL-NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ + + VL+F K E+ +LA + +H D Q
Sbjct: 460 FEKLPGMIDDGDVLVFASKKATVDEIESQLAQKGFKVAALHGDKDQ 505
>gi|213402561|ref|XP_002172053.1| ATP-dependent RNA helicase Sum3 [Schizosaccharomyces japonicus
yFS275]
gi|212000100|gb|EEB05760.1| ATP-dependent RNA helicase Sum3 [Schizosaccharomyces japonicus
yFS275]
Length = 626
Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 60/169 (35%), Positives = 90/169 (53%), Gaps = 14/169 (8%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L +TP RL I R +I L+ +++LVLDEAD++ ++G I +V+ P +
Sbjct: 299 CDLLSATPGRLVDLIDRGRISLANIKFLVLDEADRMLDMG-FEPQIRHIVEGADMPGVEE 357
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + D V + VGR + SE+I QK+VF +E + LL +
Sbjct: 358 RQTLMFSATFPRDIQVLARDFLKDYVFLSVGRVGSTSENITQKVVFVEDQEKRSYLLDIL 417
Query: 131 QSFAESLNPP---VLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ PP LIFV++K A L L A IH D +Q +
Sbjct: 418 HTL-----PPEGLTLIFVETKRMADALTDFLLNSSFPATSIHGDRTQRE 461
>gi|330906625|ref|XP_003295542.1| hypothetical protein PTT_01533 [Pyrenophora teres f. teres 0-1]
gi|311333102|gb|EFQ96370.1| hypothetical protein PTT_01533 [Pyrenophora teres f. teres 0-1]
Length = 750
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 107/219 (48%), Gaps = 56/219 (25%)
Query: 2 KKELVRSTDLSKFSCDILISTPLRLRLAIRRKK---IDLSRVEYLVLDEADKLFEVGNLL 58
KK+ R +L K + IL++TPL + A++R+ +L V LVLDEAD L
Sbjct: 359 KKQAGRRAELVKAA--ILVATPLAILNALKRRDGTVANLPSVSQLVLDEADVL------- 409
Query: 59 KHIDPVVK--------ACSNPSIVRSLFSATLPDFVEELARSIMHDA------------- 97
+DP+ + AC+NP + L+SAT+ +E L S ++
Sbjct: 410 --LDPLFRDQTLALWNACTNPKLRIGLWSATMGSNIESLTISTLNSRWTNLSSSQPTLPP 467
Query: 98 ----VRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ----------SFAESLNPPVLI 143
+R++VG K++A +I +L +A +E GKLL LRQ S +L PP L+
Sbjct: 468 RPPLIRLVVGLKDSAIPNITHQLTYAATEPGKLLGLRQLLHPTSISTTSTQPTLRPPFLV 527
Query: 144 FVQSKDRAKELYGELAFD-------DIRAGVIHSDLSQT 175
F Q+ RA L+ EL +D R V+H+DLS +
Sbjct: 528 FTQTIPRAIALHSELLYDIPPEAGGSTRIAVLHADLSSS 566
>gi|344301404|gb|EGW31716.1| hypothetical protein SPAPADRAFT_51698 [Spathaspora passalidarum
NRRL Y-27907]
Length = 644
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 56/166 (33%), Positives = 90/166 (54%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL+ + R +I LS ++YLVLDEAD++ ++G I +V+ C P +
Sbjct: 299 CDLLVATPGRLKDLLERGRISLSNIKYLVLDEADRMLDMG-FEPQIRHIVQECDMPDVNN 357
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LA + D V + VGR + SE+I QK+++ +E K +L L
Sbjct: 358 RQTLMFSATFPRDIQLLAHDFLKDYVFLSVGRVGSTSENITQKILYVEDDEKKSVILDLL 417
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L ++F ++K A L L A IH D +Q +
Sbjct: 418 SAGDAGL---TIVFTETKRMADNLADFLYDQGFPATAIHGDRTQYE 460
>gi|393236170|gb|EJD43720.1| DEAD-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 650
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 57/164 (34%), Positives = 87/164 (53%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L +TP RL I R +I L+ + YLVLDEAD++ ++G I +V+ P +
Sbjct: 315 CDLLSATPGRLVDLIERGRISLANIRYLVLDEADRMLDMG-FEPQIRRIVQGEDMPGVQE 373
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LA+ + + + + VGR + SE+I QK+ + E + + L
Sbjct: 374 RQTLMFSATFPRDIQILAKDFLKEYIFLSVGRVGSTSENITQKIEYVEDNEKRSILLDIL 433
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
AE N LIFV++K A L L + A IH D SQ +
Sbjct: 434 HAEGKNGLTLIFVETKRMADILSDFLYANQFPATSIHGDRSQRE 477
>gi|372489782|ref|YP_005029347.1| DNA/RNA helicase [Dechlorosoma suillum PS]
gi|359356335|gb|AEV27506.1| DNA/RNA helicase, superfamily II [Dechlorosoma suillum PS]
Length = 473
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 93/164 (56%), Gaps = 5/164 (3%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
K DIL++ P RL I ++ +DLS +E LVLDEAD++ ++G ++ I ++ A P+
Sbjct: 127 KRGVDILVACPGRLLDHINQRTLDLSGIEILVLDEADRMLDMG-FIRDIRKIL-ALLPPN 184
Query: 73 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
R LFSAT D ++ELARS +HD + V R+NT E++ QK++ E+ K + L
Sbjct: 185 GKRQNLLFSATFSDEIKELARSFLHDPQSIEVARRNTTVETVSQKVIHVDREKKKDVLLH 244
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
N VLIF ++K A L L + IR+ +H + +Q
Sbjct: 245 LFENRGWN-QVLIFTRTKHGADALSRRLDKEGIRSAALHGNKTQ 287
>gi|392589702|gb|EIW79032.1| DEAD-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 654
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 57/164 (34%), Positives = 87/164 (53%), Gaps = 5/164 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L +TP RL I R +I L+ ++YLVLDEAD++ ++G I +V+ P
Sbjct: 313 CDLLTATPGRLVDLIERGRISLANIKYLVLDEADRMLDMG-FEPQIRRIVQGEDMPGTQE 371
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + D + + VGR + SE+I QK+ + + K L
Sbjct: 372 RQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGSTSENITQKIEYV-EDNDKRSVLLDI 430
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
A L+ L+FV++K A L L + I A IH D +Q +
Sbjct: 431 LASDLSGLTLVFVETKRMADMLSDFLMSNRIAATSIHGDRTQRE 474
>gi|319783363|ref|YP_004142839.1| DEAD/DEAH box helicase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317169251|gb|ADV12789.1| DEAD/DEAH box helicase domain protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 474
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 92/161 (57%), Gaps = 3/161 (1%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
DILI+TP RL +R + L+ ++LVLDE D++ ++G + + + KA + P
Sbjct: 139 GVDILIATPGRLTDLVREGDLMLADTKWLVLDEGDRMLDMG-FINDVKRIAKATA-PDRQ 196
Query: 75 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
LFSAT+P+ + ELA+ ++ + +RV V ++TA+ I Q +VFA +++ K L A
Sbjct: 197 TVLFSATMPNEIAELAKGLLKNPIRVEVAPQSTAAAEIVQGVVFARTKQ-KRQVLSTMLA 255
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
+ V+IF ++K A + +L D +A VIH + SQ
Sbjct: 256 DETMKSVIIFSRTKHGADRVTKDLERDGFKAAVIHGNKSQN 296
>gi|288942468|ref|YP_003444708.1| DEAD/DEAH box helicase domain-containing protein [Allochromatium
vinosum DSM 180]
gi|288897840|gb|ADC63676.1| DEAD/DEAH box helicase domain protein [Allochromatium vinosum DSM
180]
Length = 438
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 96/171 (56%), Gaps = 5/171 (2%)
Query: 5 LVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPV 64
+V T + DIL++TP RL + + +DLS++E+ VLDEAD++ ++G + I V
Sbjct: 112 MVPQTTALRRGVDILVATPGRLLDHVGQGHVDLSKIEFFVLDEADRMLDMG-FIHDIRRV 170
Query: 65 VKACSNPSIVRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEE 123
+K PS ++ LFSAT +E+LA ++HD +R+ V +NTA+E++ Q +V + E
Sbjct: 171 LKLL--PSKRQNLLFSATYSREIEQLAIGLLHDPLRIEVAPRNTAAETVTQ-VVHPVARE 227
Query: 124 GKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
K L + VLIF ++K A L +L D I A IH + SQ
Sbjct: 228 AKRSLLSHLILQGDWQQVLIFTRTKHGANRLAEQLGRDGITAAAIHGNKSQ 278
>gi|386821083|ref|ZP_10108299.1| DNA/RNA helicase, superfamily II [Joostella marina DSM 19592]
gi|386426189|gb|EIJ40019.1| DNA/RNA helicase, superfamily II [Joostella marina DSM 19592]
Length = 595
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 94/166 (56%), Gaps = 7/166 (4%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
K I+++TP R++ I R +D+S++EY VLDEAD++ +G + I+ ++
Sbjct: 120 KRGAQIVVATPGRMKDMISRNMVDISKIEYCVLDEADEMLNMG-FYEDINEILSHAPKEK 178
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
LFSAT+P V +A+ M + V VG KN A+ +++ + G + + LAL++
Sbjct: 179 ST-WLFSATMPREVATIAKKFMKNPQEVTVGAKNAATSNVQHEYYVVGGRD-RYLALKR- 235
Query: 133 FAESLNPPV--LIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
A++ NP + +IF ++K +++ +L D AG +H DLSQ Q
Sbjct: 236 LADT-NPDIFSVIFCRTKRDTQKVAEKLIEDGYNAGALHGDLSQNQ 280
>gi|384497894|gb|EIE88385.1| hypothetical protein RO3G_13096 [Rhizopus delemar RA 99-880]
Length = 658
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 54/164 (32%), Positives = 89/164 (54%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL + R ++ LS + YLVLDEAD++ ++G I +V+ P +
Sbjct: 322 CDLLVATPGRLVDLLERARVSLSLIRYLVLDEADRMLDMG-FEPQIRRIVEKEDMPHVEN 380
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + D + + VGR + SE+I QK+ + E+ + + L
Sbjct: 381 RNTLMFSATFPRDIQYLARDFLKDYIFLSVGRVGSTSENITQKIEYVEDEDKRSVLLDIL 440
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ ++ LIFV++K A L L + A IH D +Q +
Sbjct: 441 HSNEVSGLSLIFVETKRMADALSDFLLDHNFPATAIHGDRTQRE 484
>gi|322799398|gb|EFZ20748.1| hypothetical protein SINV_08125 [Solenopsis invicta]
Length = 764
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 56/165 (33%), Positives = 92/165 (55%), Gaps = 10/165 (6%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSI 73
+I+++TP R+ ++ K +L+RV +LVLDEAD++F++G +P V++ N P
Sbjct: 379 EIVVATPGRMIDLVKMKATNLTRVTFLVLDEADRMFDMG-----FEPQVRSICNHVRPDR 433
Query: 74 VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLV-FAGSEEGKLLALRQS 132
LFSAT VE+LAR I+ D +R++ G A+ + Q ++ F + GK L Q+
Sbjct: 434 QTLLFSATFKKKVEKLARDILTDPIRIVQGDVGEANTDVTQHVIMFHNNPSGKWNWLLQN 493
Query: 133 FAESLNP-PVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E L+ +LIFV K A+EL L + ++H D+ Q +
Sbjct: 494 LVEFLSAGSLLIFVTKKLNAEELANNLKLKEFDVLLLHGDMDQLE 538
>gi|340522872|gb|EGR53105.1| predicted protein [Trichoderma reesei QM6a]
Length = 561
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 60/166 (36%), Positives = 89/166 (53%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ PS+
Sbjct: 210 CDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPSVAD 268
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + D V + VGR + SE+I QK+ F + + LL +
Sbjct: 269 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEFVEDIDKRSVLLDIL 328
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ A L LIFV++K A L L A IH D +Q +
Sbjct: 329 HTHAGGL---TLIFVETKRMADSLSDFLINQSFPATSIHGDRTQRE 371
>gi|301612200|ref|XP_002935570.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Xenopus (Silurana)
tropicalis]
Length = 943
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 59/164 (35%), Positives = 89/164 (54%), Gaps = 9/164 (5%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSI 73
+I++ TP RL +++K +L RV YLV DEAD++F++G + V++ +N P
Sbjct: 376 EIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDMG-----FEYQVRSIANHVRPDR 430
Query: 74 VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 133
LFSAT +E+LAR I+ D +RV+ G A+E I Q + S K L +
Sbjct: 431 QTLLFSATFRKKIEKLARDILVDPIRVVQGDIGEANEDITQVVEILPSGPEKWTWLTRRL 490
Query: 134 AE-SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E + VLIFV K A+EL L DD G++H D+ Q++
Sbjct: 491 VEFTSTGSVLIFVTKKANAEELANNLRQDDHPLGLLHGDMDQSE 534
>gi|110633776|ref|YP_673984.1| DEAD/DEAH box helicase [Chelativorans sp. BNC1]
gi|110284760|gb|ABG62819.1| DEAD/DEAH box helicase-like protein [Chelativorans sp. BNC1]
Length = 460
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 94/161 (58%), Gaps = 3/161 (1%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
D+LI+TP RL +R + LS +LVLDEAD++ ++G + + + KA ++P+
Sbjct: 149 GVDVLIATPGRLTDLVRDGAVVLSETTWLVLDEADRMLDMG-FINDVRRIAKA-THPARQ 206
Query: 75 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
+LFSAT+P +E LA S++ + VR+ V + T + I+Q ++ A +++ + L L + A
Sbjct: 207 TALFSATMPREIEALASSLLKEPVRIEVSPQGTTAAEIRQSVIMARTKQKRKL-LSEMLA 265
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
+ V+IF ++K A + +L D +A VIH + SQ
Sbjct: 266 DEKMAQVIIFSRTKHGADRVTKDLQHDGFQAAVIHGNKSQN 306
>gi|302307229|ref|NP_983823.2| ADL273Cp [Ashbya gossypii ATCC 10895]
gi|442570182|sp|Q75B50.2|DED1_ASHGO RecName: Full=ATP-dependent RNA helicase DED1
gi|299788899|gb|AAS51647.2| ADL273Cp [Ashbya gossypii ATCC 10895]
gi|374107035|gb|AEY95943.1| FADL273Cp [Ashbya gossypii FDAG1]
Length = 623
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 88/165 (53%), Gaps = 5/165 (3%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
CD++++TP RL + R KI L V+YLVLDEAD++ ++G I +V+ C P++
Sbjct: 278 GCDLIVATPGRLNDLLERGKISLCSVKYLVLDEADRMLDMG-FEPQIRHIVEGCDMPTVE 336
Query: 75 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
+FSAT P ++ LA + D + + VGR + SE+I QK++ + K L
Sbjct: 337 NRQTLMFSATFPTDIQHLAADFLKDYIFLSVGRVGSTSENITQKVLHV-EDIDKRSVLLD 395
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
A S L+FV++K A L L ++ A IH D +Q +
Sbjct: 396 LLAASDGGLTLVFVETKRMADALTDFLIMQNLSATAIHGDRTQAE 440
>gi|378725351|gb|EHY51810.1| ATP-dependent RNA helicase ded1 [Exophiala dermatitidis NIH/UT8656]
Length = 661
Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 58/166 (34%), Positives = 90/166 (54%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L+ ++YLVLDEAD++ ++G I +V+ P++
Sbjct: 315 CDLLVATPGRLVDLIERGRISLANIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPTVQN 373
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + D V + VGR + SE+I QK+ + ++ + LL +
Sbjct: 374 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVEDQDKRSVLLDIL 433
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
S L LIFV++K A L L A IH D +Q +
Sbjct: 434 HSHNGGL---TLIFVETKRMADTLSDFLINQGFPATAIHGDRTQRE 476
>gi|293397166|ref|ZP_06641440.1| ATP-dependent RNA helicase RhlE [Serratia odorifera DSM 4582]
gi|291420637|gb|EFE93892.1| ATP-dependent RNA helicase RhlE [Serratia odorifera DSM 4582]
Length = 447
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 88/162 (54%), Gaps = 3/162 (1%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + +DLS++E LVLDEAD++ ++G + I V+ P
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMG-FIHDIRRVLSKLP-PK 180
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
LFSAT D ++ LA ++H+ V V R+NTASE I+Q + F + + L L Q
Sbjct: 181 RQNLLFSATFSDEIKGLASKLLHNPASVEVARRNTASEQIEQSVHFVDKKRKREL-LSQM 239
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
E VL+F ++K A L +L D I A IH + SQ
Sbjct: 240 IGEGDWRQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQ 281
>gi|448241070|ref|YP_007405123.1| ATP-dependent RNA helicase [Serratia marcescens WW4]
gi|445211434|gb|AGE17104.1| ATP-dependent RNA helicase [Serratia marcescens WW4]
Length = 459
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 91/163 (55%), Gaps = 5/163 (3%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + +DLS++E LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 73 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
++L FSAT D ++ LA ++H+ V V R+NTASE I+Q + F + + L L Q
Sbjct: 180 KRQNLLFSATFSDDIKALANKLLHNPASVEVARRNTASEQIEQSVHFVDKKRKREL-LSQ 238
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
E VL+F ++K A L +L D I A IH + SQ
Sbjct: 239 MIGEGDWKQVLVFTRTKHGANHLAEQLNKDGITAAAIHGNKSQ 281
>gi|307190551|gb|EFN74538.1| ATP-dependent RNA helicase DDX42 [Camponotus floridanus]
Length = 769
Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 55/165 (33%), Positives = 92/165 (55%), Gaps = 10/165 (6%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSI 73
+I+++TP R+ ++ K +L+RV +LVLDEAD++F++G +P V++ N P
Sbjct: 379 EIVVATPGRMIDLVKMKATNLTRVTFLVLDEADRMFDMG-----FEPQVRSICNHVRPDR 433
Query: 74 VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLV-FAGSEEGKLLALRQS 132
LFSAT VE+LAR ++ D +R++ G A+ + Q ++ F + GK L Q+
Sbjct: 434 QTLLFSATFKKKVEKLARDVLTDPIRIVQGDVGEANTDVTQHVIMFHNNPSGKWNWLLQN 493
Query: 133 FAESLNP-PVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E L+ +LIFV K A+EL L + ++H D+ Q +
Sbjct: 494 LVEFLSAGSLLIFVTKKLNAEELANNLKLKEFDVLLLHGDMDQIE 538
>gi|46124853|ref|XP_386980.1| hypothetical protein FG06804.1 [Gibberella zeae PH-1]
gi|91206556|sp|Q4I7K4.1|DED1_GIBZE RecName: Full=ATP-dependent RNA helicase DED1
Length = 675
Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 58/166 (34%), Positives = 89/166 (53%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 322 CDLLVATPGRLVDLIERGRISLQNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPQVQD 380
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + D + + VGR + SE+I QK+ + + + LL +
Sbjct: 381 RQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGSTSENITQKVEYVEDVDKRSVLLDIL 440
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
S A L LIFV++K A L L + A IH D +Q +
Sbjct: 441 HSHANGL---TLIFVETKRMADSLSDFLINQNFPATSIHGDRTQRE 483
>gi|444352450|ref|YP_007388594.1| ATP-dependent RNA helicase RhlE [Enterobacter aerogenes EA1509E]
gi|443903280|emb|CCG31054.1| ATP-dependent RNA helicase RhlE [Enterobacter aerogenes EA1509E]
Length = 446
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 87/162 (53%), Gaps = 3/162 (1%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + + L +VE LVLDEAD++ ++G + H V A P
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVSLDKVEVLVLDEADRMLDMGFI--HDIRRVLAKLPPR 180
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
LFSAT D ++ LA ++H+ + V V R+NTASE I Q + F + + L L Q
Sbjct: 181 RQNLLFSATFSDEIKALAEKLLHNPLEVEVARRNTASEQITQHVHFVDKKRKREL-LSQL 239
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
E VL+F ++K A L +L D IR+ IH + SQ
Sbjct: 240 IGEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQ 281
>gi|336249396|ref|YP_004593106.1| ATP-dependent RNA helicase RhlE [Enterobacter aerogenes KCTC 2190]
gi|334735452|gb|AEG97827.1| ATP-dependent RNA helicase RhlE [Enterobacter aerogenes KCTC 2190]
Length = 446
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 87/162 (53%), Gaps = 3/162 (1%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + + L +VE LVLDEAD++ ++G + H V A P
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVSLDKVEVLVLDEADRMLDMGFI--HDIRRVLAKLPPR 180
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
LFSAT D ++ LA ++H+ + V V R+NTASE I Q + F + + L L Q
Sbjct: 181 RQNLLFSATFSDEIKALAEKLLHNPLEVEVARRNTASEQITQHVHFVDKKRKREL-LSQL 239
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
E VL+F ++K A L +L D IR+ IH + SQ
Sbjct: 240 IGEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQ 281
>gi|147904603|ref|NP_001080569.1| ATP-dependent RNA helicase DDX42 [Xenopus laevis]
gi|82209788|sp|Q7ZY47.1|DDX42_XENLA RecName: Full=ATP-dependent RNA helicase DDX42; AltName: Full=DEAD
box protein 42
gi|27696431|gb|AAH43977.1| Ddx42-prov protein [Xenopus laevis]
Length = 947
Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 58/164 (35%), Positives = 89/164 (54%), Gaps = 9/164 (5%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSI 73
+I++ TP RL +++K +L RV YLV DEAD++F++G + V++ +N P
Sbjct: 375 EIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDMG-----FEYQVRSIANHVRPDR 429
Query: 74 VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 133
LFSAT +E+LAR I+ D +RV+ G A+E I Q + S K L +
Sbjct: 430 QTLLFSATFRKKIEKLARDILVDPIRVVQGDIGEANEDITQVVEILPSGPEKWTWLTRRL 489
Query: 134 AE-SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E + VL+FV K A+EL L DD G++H D+ Q++
Sbjct: 490 VEFTSTGSVLVFVTKKANAEELAANLRQDDHPLGLLHGDMDQSE 533
>gi|409041060|gb|EKM50546.1| hypothetical protein PHACADRAFT_263884 [Phanerochaete carnosa
HHB-10118-sp]
Length = 647
Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 58/164 (35%), Positives = 86/164 (52%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L +TP RL I R +I L+ + YLVLDEAD++ ++G I +V+ P
Sbjct: 311 CDLLSATPGRLVDLIERGRISLANIRYLVLDEADRMLDMG-FEPQIRRIVQGEDMPGTQD 369
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR M D V + VGR + SE+I QK+ + + + + L
Sbjct: 370 RQTLMFSATFPRDIQVLARDFMKDYVFLSVGRVGSTSENITQKIEYVEDPDKRSVLLDIL 429
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
A+ L+FV++K A L L + I A IH D SQ +
Sbjct: 430 SAQDEGGLTLVFVETKRMADMLSDFLYTNRIAATSIHGDRSQRE 473
>gi|163915660|gb|AAI57684.1| LOC100135374 protein [Xenopus (Silurana) tropicalis]
Length = 898
Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 59/164 (35%), Positives = 89/164 (54%), Gaps = 9/164 (5%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSI 73
+I++ TP RL +++K +L RV YLV DEAD++F++G + V++ +N P
Sbjct: 331 EIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDMG-----FEYQVRSIANHVRPDR 385
Query: 74 VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 133
LFSAT +E+LAR I+ D +RV+ G A+E I Q + S K L +
Sbjct: 386 QTLLFSATFRKKIEKLARDILVDPIRVVQGDIGEANEDITQVVEILPSGPEKWTWLTRRL 445
Query: 134 AE-SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E + VLIFV K A+EL L DD G++H D+ Q++
Sbjct: 446 VEFTSTGSVLIFVTKKANAEELANNLRQDDHPLGLLHGDMDQSE 489
>gi|453062686|gb|EMF03676.1| ATP-dependent RNA helicase RhlE [Serratia marcescens VGH107]
Length = 457
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 91/163 (55%), Gaps = 5/163 (3%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + +DLS++E LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 73 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
++L FSAT D ++ LA ++H+ V V R+NTASE I+Q + F + + L L Q
Sbjct: 180 KRQNLLFSATFSDDIKALANKLLHNPASVEVARRNTASEQIEQSVHFVDKKRKREL-LSQ 238
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
E VL+F ++K A L +L D I A IH + SQ
Sbjct: 239 MIGEGDWKQVLVFTRTKHGANHLAEQLNKDGITAAAIHGNKSQ 281
>gi|358389632|gb|EHK27224.1| hypothetical protein TRIVIDRAFT_85827 [Trichoderma virens Gv29-8]
Length = 670
Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 59/166 (35%), Positives = 89/166 (53%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P++
Sbjct: 316 CDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPNVAD 374
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + D V + VGR + SE+I QK+ F + + LL +
Sbjct: 375 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEFVEDIDKRSVLLDIL 434
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ A L LIFV++K A L L A IH D +Q +
Sbjct: 435 HTHAGGL---TLIFVETKRMADSLSDFLINQSFPATSIHGDRTQRE 477
>gi|222624792|gb|EEE58924.1| hypothetical protein OsJ_10575 [Oryza sativa Japonica Group]
Length = 696
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 89/167 (53%), Gaps = 9/167 (5%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-- 70
K C+I+I+TP RL ++ K + + R YLVLDEAD++F++G +P +++
Sbjct: 266 KAGCEIVIATPGRLIDLLKMKALKMFRATYLVLDEADRMFDLG-----FEPQIRSIVGQI 320
Query: 71 -PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 129
P LFSAT+P VE LAR I+ D +RV VG+ +A+E IKQ + S+ K+ L
Sbjct: 321 RPDRQTLLFSATMPYKVERLAREILTDPIRVTVGQVGSANEDIKQVVNVLPSDAEKMPWL 380
Query: 130 RQSFAESL-NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
+ + + VL+F K R E+ +L R +H D Q
Sbjct: 381 LEKLPGMIDDGDVLVFAAKKARVDEIESQLNQRGFRIAALHGDKDQA 427
>gi|238784236|ref|ZP_04628248.1| ATP-dependent RNA helicase rhlE [Yersinia bercovieri ATCC 43970]
gi|238714803|gb|EEQ06803.1| ATP-dependent RNA helicase rhlE [Yersinia bercovieri ATCC 43970]
Length = 451
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 90/163 (55%), Gaps = 5/163 (3%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + +DLS++E LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 73 IVRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
++ LFSAT D ++ LA ++H+ V V V R+NTASE I Q + F + L L Q
Sbjct: 180 KRQNLLFSATFSDEIKGLASKLLHNPVSVEVARRNTASEQITQSVHFVDKNRKREL-LSQ 238
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
E VL+F ++K A L +L D I A IH + SQ
Sbjct: 239 MIGEGNWQQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQ 281
>gi|238798926|ref|ZP_04642391.1| ATP-dependent RNA helicase rhlE [Yersinia mollaretii ATCC 43969]
gi|238717236|gb|EEQ09087.1| ATP-dependent RNA helicase rhlE [Yersinia mollaretii ATCC 43969]
Length = 451
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 90/163 (55%), Gaps = 5/163 (3%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + +DLS++E LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 73 IVRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
++ LFSAT D ++ LA ++H+ V V V R+NTASE I Q + F + L L Q
Sbjct: 180 KRQNLLFSATFSDEIKGLASKLLHNPVSVEVARRNTASEQITQSVHFVDKNRKREL-LSQ 238
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
E VL+F ++K A L +L D I A IH + SQ
Sbjct: 239 MIGEGNWQQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQ 281
>gi|408388364|gb|EKJ68050.1| hypothetical protein FPSE_11861 [Fusarium pseudograminearum CS3096]
Length = 683
Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 58/166 (34%), Positives = 89/166 (53%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 329 CDLLVATPGRLVDLIERGRISLQNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPQVQD 387
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + D + + VGR + SE+I QK+ + + + LL +
Sbjct: 388 RQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGSTSENITQKVEYVEDVDKRSVLLDIL 447
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
S A L LIFV++K A L L + A IH D +Q +
Sbjct: 448 HSHANGL---TLIFVETKRMADSLSDFLINQNFPATSIHGDRTQRE 490
>gi|256052028|ref|XP_002569581.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
gi|350646171|emb|CCD59155.1| DEAD box ATP-dependent RNA helicase, putative [Schistosoma mansoni]
Length = 840
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 89/165 (53%), Gaps = 9/165 (5%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---P 71
C+IL+ TP RL +++K +L RV YLV DEADK+F +G +P V++ +N P
Sbjct: 420 GCEILVCTPGRLIDIVKKKSTNLRRVTYLVFDEADKMFNLG-----FEPQVRSIANHVRP 474
Query: 72 SIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
LFSAT +E LAR I+ D VR+I G A+E I Q + E K L +
Sbjct: 475 DRQTLLFSATFKRRLERLARDILLDPVRIIQGELGEANEDITQHVEIFDKIEQKWDWLTR 534
Query: 132 SFAE-SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
+ + VLIFV K ++E+ +L D++ +IH D+ Q+
Sbjct: 535 NLVRLTTEGSVLIFVTRKVHSEEVAQKLKSRDLKVLLIHGDMHQS 579
>gi|171694872|ref|XP_001912360.1| hypothetical protein [Podospora anserina S mat+]
gi|170947678|emb|CAP59840.1| unnamed protein product [Podospora anserina S mat+]
Length = 763
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 96/189 (50%), Gaps = 32/189 (16%)
Query: 16 CDILISTP------LRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
DIL++TP L + K L V L+LDEAD L + K + K+C
Sbjct: 386 VDILVTTPKILLNFLSDDGKLTNSKRTLPTVRSLILDEADVLLDP-IFRKQTMAIWKSCV 444
Query: 70 NPSIVRSLFSATLPDFVEELAR----------SIMHDAVRVIVGRKNTASESIKQKLVFA 119
+P + + +SAT+ +E L +I +R++VG K+TA ++ KL++
Sbjct: 445 HPDVALTCWSATMASNIEALVTKHLSKRAKHFNISRPLIRLVVGLKDTAVPNVTHKLIYT 504
Query: 120 GSEEGKLLALRQ-----SFAES---LNPPVLIFVQSKDRAKELYGELAFD-------DIR 164
+E+GKLLALRQ S ++S L PP ++F Q+ DRAK L+ EL FD R
Sbjct: 505 ATEQGKLLALRQLLHPASSSDSGPPLRPPFIVFTQTIDRAKALHKELQFDIPLEAGGQAR 564
Query: 165 AGVIHSDLS 173
V+HS LS
Sbjct: 565 IAVLHSSLS 573
>gi|157119649|ref|XP_001653435.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108875244|gb|EAT39469.1| AAEL008738-PA [Aedes aegypti]
Length = 911
Score = 86.7 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 53/163 (32%), Positives = 93/163 (57%), Gaps = 5/163 (3%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
+++I+TP RL + R +L R YLVLDEAD++ ++G I +++ P
Sbjct: 356 EVVIATPGRLIDFLERGITNLRRCTYLVLDEADRMLDMG-FEPQIRKIIEQI-RPDRQVL 413
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQ--KLVFAGSEEGKLLALRQSF 133
++SAT P V+ LA +HD +++ +G N +A+ +I Q + G +EGKLL+L +
Sbjct: 414 MWSATWPKEVQALAEDFLHDYIQINIGSLNLSANHNIHQIVDVCEEGEKEGKLLSLLKEI 473
Query: 134 AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ +N ++IFV++K + ++L + D A IH D SQ++
Sbjct: 474 SSDVNSKIIIFVETKKKVEDLLKNIVRDGYGATSIHGDKSQSE 516
>gi|400600842|gb|EJP68510.1| putative ATP-dependent RNA helicase DED1 [Beauveria bassiana ARSEF
2860]
Length = 668
Score = 86.7 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 59/166 (35%), Positives = 89/166 (53%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P++
Sbjct: 322 CDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPAVAD 380
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + D V + VGR + SE+I QK+ + + + LL +
Sbjct: 381 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVEDVDKRSVLLDIL 440
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
S A L LIFV++K A L L A IH D +Q +
Sbjct: 441 HSHAGGL---TLIFVETKRMADSLSEFLMNQSFPATSIHGDRTQRE 483
>gi|336273804|ref|XP_003351656.1| hypothetical protein SMAC_00198 [Sordaria macrospora k-hell]
gi|380095935|emb|CCC05982.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 777
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 102/196 (52%), Gaps = 38/196 (19%)
Query: 17 DILISTPLRL----------RLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVK 66
DIL++TP L + R K L V+ L+LDEAD L + K + +
Sbjct: 391 DILVTTPKILLNFLCGGEKEKGKPRIVKKTLPTVQSLILDEADVLLDP-IFRKQTMGIWR 449
Query: 67 ACSNPSIVRSLFSATLPDFVEEL-ARSIMHDA-----------VRVIVGRKNTASESIKQ 114
AC++P++ + +SAT+ +E L +SI A +R++VG K+TA +I
Sbjct: 450 ACTHPNLGMTCWSATMASNIEALLTKSIEKRAKRTPEQTPKPLIRLVVGLKDTAVPNITH 509
Query: 115 KLVFAGSEEGKLLALRQ-----SFAES---LNPPVLIFVQSKDRAKELYGELAFD----- 161
KL++ +E GKLLALRQ S A+S L PP L+F Q+ DRA+ L+ EL +D
Sbjct: 510 KLIYCATEPGKLLALRQLLHPVSSADSGPPLRPPFLVFTQTIDRAQALHDELKYDIPLEA 569
Query: 162 --DIRAGVIHSDLSQT 175
R V+HS LS +
Sbjct: 570 GGSARVAVLHSSLSDS 585
>gi|307204462|gb|EFN83169.1| ATP-dependent RNA helicase DDX42 [Harpegnathos saltator]
Length = 770
Score = 86.7 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 55/164 (33%), Positives = 90/164 (54%), Gaps = 9/164 (5%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSI 73
+I+++TP R+ ++ K +L RV +LVLDEAD++F++G +P V++ N P
Sbjct: 379 EIVVATPGRMIDLVKMKATNLIRVTFLVLDEADRMFDMG-----FEPQVRSICNHVRPDR 433
Query: 74 VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 133
LFSAT VE+LAR ++ D VR++ G A+ + Q ++ + GK L Q+
Sbjct: 434 QTLLFSATFKKRVEKLARDVLMDPVRIVQGDVGEANTDVTQHVIMFHNPGGKWNWLLQNL 493
Query: 134 AESLNP-PVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E L+ +LIFV K A+EL L + ++H D+ Q +
Sbjct: 494 VEFLSAGSLLIFVTKKLNAEELANNLKLKEFDVLLLHGDMDQIE 537
>gi|115452607|ref|NP_001049904.1| Os03g0308500 [Oryza sativa Japonica Group]
gi|122247124|sp|Q10MH8.1|RH24_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 24
gi|108707754|gb|ABF95549.1| DEAD/DEAH box helicase family protein, expressed [Oryza sativa
Japonica Group]
gi|113548375|dbj|BAF11818.1| Os03g0308500 [Oryza sativa Japonica Group]
gi|215737377|dbj|BAG96306.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 770
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 89/167 (53%), Gaps = 9/167 (5%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-- 70
K C+I+I+TP RL ++ K + + R YLVLDEAD++F++G +P +++
Sbjct: 340 KAGCEIVIATPGRLIDLLKMKALKMFRATYLVLDEADRMFDLG-----FEPQIRSIVGQI 394
Query: 71 -PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 129
P LFSAT+P VE LAR I+ D +RV VG+ +A+E IKQ + S+ K+ L
Sbjct: 395 RPDRQTLLFSATMPYKVERLAREILTDPIRVTVGQVGSANEDIKQVVNVLPSDAEKMPWL 454
Query: 130 RQSFAESL-NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
+ + + VL+F K R E+ +L R +H D Q
Sbjct: 455 LEKLPGMIDDGDVLVFAAKKARVDEIESQLNQRGFRIAALHGDKDQA 501
>gi|406698237|gb|EKD01477.1| ATP dependent RNA helicase [Trichosporon asahii var. asahii CBS
8904]
Length = 264
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 65/97 (67%), Gaps = 2/97 (2%)
Query: 82 LPDFVEELARSIMHDA-VRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNP- 139
+P EELAR+ + DA VRV+VG K++A ++ Q L++ GSE+GKLLALR AE P
Sbjct: 1 MPAGAEELARAWLKDAGVRVVVGLKDSAVTTVDQSLLYTGSEQGKLLALRNLIAEGGLPY 60
Query: 140 PVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
P LIFVQS +RA EL +L D +RA +H S+T+
Sbjct: 61 PSLIFVQSIERADELARQLVLDGVRAEAVHGGKSKTR 97
>gi|388581974|gb|EIM22280.1| DEAD-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 591
Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 62/167 (37%), Positives = 91/167 (54%), Gaps = 7/167 (4%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L + P RL I R KI L+ V+YLVLDEAD++ ++G I +V+ C PS+
Sbjct: 268 CDLLSAAPGRLCDFIDRGKISLANVKYLVLDEADRMLDMG-FEPQIRRIVQGCDMPSVED 326
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
LFSAT P ++ LA + + + + VGR + SE+I Q + +A E K LL +
Sbjct: 327 RQTLLFSATFPREIQLLAGDFLKNEIFLSVGRVGSTSENITQTVEWAEDFEKKSVLLDIL 386
Query: 131 QSFAE-SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ E N LIFV++K A L L +++RA IH D Q +
Sbjct: 387 EGHMEPESNNRTLIFVETKRMADILCDFLLQNNLRATAIHGDRDQRE 433
>gi|356505639|ref|XP_003521597.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 24-like [Glycine
max]
Length = 782
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-- 70
K C+I+++TP RL ++ K + + R YLVLDEAD++F++G +P V++
Sbjct: 358 KAGCEIVVATPGRLIDMLKMKALTMMRATYLVLDEADRMFDLG-----FEPQVRSIVGQI 412
Query: 71 -PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 129
P LFSAT+P VE+LAR I+ D +RV VG A+E I Q + S+ KL L
Sbjct: 413 RPDRQTLLFSATMPCKVEKLAREILSDPIRVTVGEVGMANEDITQVVHVTPSDSEKLPWL 472
Query: 130 RQSFAESLNPP-VLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ E ++ L+F K E+ +LA + +H D Q
Sbjct: 473 LEKLPEMIDQGDTLVFASKKATVDEIESQLAQRGFKVAALHGDKDQ 518
>gi|315045390|ref|XP_003172070.1| ATP-dependent RNA helicase ded1 [Arthroderma gypseum CBS 118893]
gi|311342456|gb|EFR01659.1| ATP-dependent RNA helicase ded1 [Arthroderma gypseum CBS 118893]
Length = 689
Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 58/166 (34%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 342 CDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPPVAG 400
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFA--GSEEGKLLALR 130
+FSAT P ++ LAR + D V + VGR + SE+I QK+ + G + LL +
Sbjct: 401 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVEDGDKRSVLLDIL 460
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L LIFV++K A L L A IH D +Q +
Sbjct: 461 HTHGAGL---TLIFVETKRMADSLSEFLINQHFPATAIHGDRTQRE 503
>gi|408788051|ref|ZP_11199774.1| ATP-dependent RNA helicase [Rhizobium lupini HPC(L)]
gi|424911054|ref|ZP_18334431.1| DNA/RNA helicase, superfamily II [Rhizobium leguminosarum bv.
viciae USDA 2370]
gi|392847085|gb|EJA99607.1| DNA/RNA helicase, superfamily II [Rhizobium leguminosarum bv.
viciae USDA 2370]
gi|408486129|gb|EKJ94460.1| ATP-dependent RNA helicase [Rhizobium lupini HPC(L)]
Length = 490
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 91/164 (55%), Gaps = 6/164 (3%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKACSNPS 72
DIL++TP RL I R I LS+V YLVLDEAD++ ++G + L+ I +V A
Sbjct: 125 GTDILVATPGRLLDLIARNAISLSKVTYLVLDEADQMLDLGFIHDLRKISKMVPAKRQ-- 182
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
LFSAT+P + +LA S + D ++V V A++ ++Q + F + K L++S
Sbjct: 183 --TLLFSATMPKAIADLAHSYLTDPLKVEVTPPGKAADKVEQYVHFVAGKNDKTELLKKS 240
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E+ + ++F+++K A++LY L + IH + SQ Q
Sbjct: 241 LNENPDGRAIVFLRTKHGAEKLYKHLEHIGFKVASIHGNKSQGQ 284
>gi|226292592|gb|EEH48012.1| ATP-dependent RNA helicase DED1 [Paracoccidioides brasiliensis
Pb18]
Length = 687
Score = 86.3 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 54/164 (32%), Positives = 90/164 (54%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI-V 74
C++L++TP RL + R +I LS ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 332 CNVLVATPGRLVDMMERGRISLSHIQYLVLDEADRMLDMG-FEPQIRRIVQGSDMPDKHL 390
Query: 75 RS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
R +FSAT P +++LA + D + + VGR + SE+I Q+++ S++ K AL
Sbjct: 391 RQTLMFSATFPPDIQKLAEEFLKDHIFLSVGRVGSTSENITQRVIECDSDKDKDSALLDI 450
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L+FV++K +A L L + A IH D +Q +
Sbjct: 451 LCSDSTGLTLVFVETKRQADMLSDFLLDHRLPATAIHGDRTQRE 494
>gi|225680888|gb|EEH19172.1| ATP-dependent RNA helicase ded1 [Paracoccidioides brasiliensis
Pb03]
Length = 686
Score = 86.3 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 54/164 (32%), Positives = 90/164 (54%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI-V 74
C++L++TP RL + R +I LS ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 332 CNVLVATPGRLVDMMERGRISLSHIQYLVLDEADRMLDMG-FEPQIRRIVQGSDMPDKHL 390
Query: 75 RS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
R +FSAT P +++LA + D + + VGR + SE+I Q+++ S++ K AL
Sbjct: 391 RQTLMFSATFPPDIQKLAEEFLKDHIFLSVGRVGSTSENITQRVIECDSDKDKDSALLDI 450
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L+FV++K +A L L + A IH D +Q +
Sbjct: 451 LCSDSTGLTLVFVETKRQADMLSDFLLDHRLPATAIHGDRTQRE 494
>gi|15889610|ref|NP_355291.1| ATP-dependent RNA helicase [Agrobacterium fabrum str. C58]
gi|15157502|gb|AAK88076.1| ATP-dependent RNA helicase [Agrobacterium fabrum str. C58]
Length = 502
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 91/164 (55%), Gaps = 6/164 (3%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKACSNPS 72
DIL++TP RL I R I LS+V YLVLDEAD++ ++G + L+ I +V P
Sbjct: 137 GTDILVATPGRLLDLIARNAISLSKVTYLVLDEADQMLDLGFIHDLRKISRMVP----PK 192
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
LFSAT+P + ELA + + D ++V V A++ ++Q + F + K L++S
Sbjct: 193 RQTLLFSATMPKAISELASNFLTDPIKVEVTPPGKAADKVEQYVHFVAGKNDKTDLLKKS 252
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E+ + ++F+++K A++LY L + IH + SQ Q
Sbjct: 253 LNENPDGRSIVFLRTKHGAEKLYKHLEHIGFKVASIHGNKSQGQ 296
>gi|335034320|ref|ZP_08527671.1| ATP-dependent RNA helicase [Agrobacterium sp. ATCC 31749]
gi|333794285|gb|EGL65631.1| ATP-dependent RNA helicase [Agrobacterium sp. ATCC 31749]
Length = 502
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 91/164 (55%), Gaps = 6/164 (3%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKACSNPS 72
DIL++TP RL I R I LS+V YLVLDEAD++ ++G + L+ I +V P
Sbjct: 137 GTDILVATPGRLLDLIARNAISLSKVTYLVLDEADQMLDLGFIHDLRKISRMVP----PK 192
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
LFSAT+P + ELA + + D ++V V A++ ++Q + F + K L++S
Sbjct: 193 RQTLLFSATMPKAISELASNFLTDPIKVEVTPPGKAADKVEQYVHFVAGKNDKTDLLKKS 252
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E+ + ++F+++K A++LY L + IH + SQ Q
Sbjct: 253 LNENPDGRSIVFLRTKHGAEKLYKHLEHIGFKVASIHGNKSQGQ 296
>gi|322703781|gb|EFY95385.1| ATP-dependent RNA helicase ded-1 [Metarhizium anisopliae ARSEF 23]
Length = 665
Score = 86.3 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 59/166 (35%), Positives = 88/166 (53%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 312 CDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPPVAD 370
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + D V + VGR + SE+I QK+ F + + LL +
Sbjct: 371 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEFVEDIDKRSVLLDIL 430
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ A L LIFV++K A L L A IH D +Q +
Sbjct: 431 HTHAGGL---TLIFVETKRMADSLSDFLINQSFPATSIHGDRTQRE 473
>gi|322696164|gb|EFY87960.1| ATP-dependent RNA helicase DED1 [Metarhizium acridum CQMa 102]
Length = 666
Score = 86.3 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 59/166 (35%), Positives = 88/166 (53%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 318 CDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPPVAD 376
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + D V + VGR + SE+I QK+ F + + LL +
Sbjct: 377 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEFVEDIDKRSVLLDIL 436
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ A L LIFV++K A L L A IH D +Q +
Sbjct: 437 HTHAGGL---TLIFVETKRMADSLSDFLINQSFPATSIHGDRTQRE 479
>gi|395331683|gb|EJF64063.1| ATP-dependent RNA helicase ded-1 [Dichomitus squalens LYAD-421 SS1]
Length = 649
Score = 86.3 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L +TP RL I R +I L+ + YLVLDEAD++ ++G I +V+ P +
Sbjct: 322 CDLLSATPGRLVDLIERGRISLANIRYLVLDEADRMLDMG-FEPQIRRIVQGEDMPGVHE 380
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR M D V + VGR + SE+I Q++ + + + LL +
Sbjct: 381 RQTLMFSATFPRDIQMLARDFMKDYVFLSVGRVGSTSENITQRIEYVEDNDKRSVLLDVL 440
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
Q+ L L+FV++K A L L +++ A IH D +Q +
Sbjct: 441 QAHGTGL---TLVFVETKRMADMLSDFLLGNNLPATSIHGDRTQRE 483
>gi|396481383|ref|XP_003841226.1| similar to ATP-dependent RNA helicase rok1 [Leptosphaeria maculans
JN3]
gi|312217800|emb|CBX97747.1| similar to ATP-dependent RNA helicase rok1 [Leptosphaeria maculans
JN3]
Length = 761
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 100/210 (47%), Gaps = 56/210 (26%)
Query: 13 KFSCDILISTPLRLRLAIRRKK---IDLSRVEYLVLDEADKLFEVGNLLKHIDP------ 63
+ IL++TPL L A++RK +L V LVLDEAD L +DP
Sbjct: 373 RVKAAILVATPLALLNALKRKDGTIANLPTVSQLVLDEADVL---------LDPLFRDQT 423
Query: 64 --VVKACSNPSIVRSLFSATLPDFVEELARSIMHDA-----------------VRVIVGR 104
+ AC+NP + L+SAT+ +E L S ++ +R++VG
Sbjct: 424 LAIWNACTNPRLRMGLWSATMGSNIETLTISTLNTRWSSLTSSQSTTQPRPPLLRLVVGL 483
Query: 105 KNTASESIKQKLVFAGSEEGKLLALRQ------------SFAESLNPPVLIFVQSKDRAK 152
K++A +I +L++A +E GKLL LRQ S +L PP L+F Q+ RA
Sbjct: 484 KDSAIPNISHQLIYAATESGKLLGLRQLLHPTSSAPSTTSETATLRPPFLVFTQTIPRAI 543
Query: 153 ELYGELAFD-------DIRAGVIHSDLSQT 175
L+ EL +D R V+H+DLS +
Sbjct: 544 ALHSELLYDIPPEAGGSSRIAVLHADLSSS 573
>gi|226494636|ref|NP_001147596.1| pre-mRNA-processing ATP-dependent RNA helicase prp-5 [Zea mays]
gi|195612416|gb|ACG28038.1| pre-mRNA-processing ATP-dependent RNA helicase prp-5 [Zea mays]
Length = 768
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 88/166 (53%), Gaps = 9/166 (5%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-- 70
K C+++I+TP RL ++ K + + R YLVLDEAD++F++G +P +++
Sbjct: 340 KAGCEVVIATPGRLIDLLKMKALKMFRATYLVLDEADRMFDLG-----FEPQIRSIVGQI 394
Query: 71 -PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 129
P LFSAT+P VE LAR I+ D +RV VG+ A+E IKQ + S+ K+ L
Sbjct: 395 RPGRQTLLFSATMPYKVERLAREILTDPIRVTVGQVGGANEDIKQVVNVIPSDAEKMPWL 454
Query: 130 RQSFAESL-NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ + + VL+F K R E+ EL R +H D Q
Sbjct: 455 LEKLPGMIDDGDVLVFASKKARVDEIERELNQRGFRIAALHGDKDQ 500
>gi|18407327|ref|NP_566099.1| DEAD-box ATP-dependent RNA helicase 24 [Arabidopsis thaliana]
gi|75318047|sp|O22907.2|RH24_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 24
gi|16323192|gb|AAL15330.1| At2g47330/T8I13.17 [Arabidopsis thaliana]
gi|20196880|gb|AAB63833.2| putative ATP-dependent RNA helicase [Arabidopsis thaliana]
gi|21700913|gb|AAM70580.1| At2g47330/T8I13.17 [Arabidopsis thaliana]
gi|330255734|gb|AEC10828.1| DEAD-box ATP-dependent RNA helicase 24 [Arabidopsis thaliana]
Length = 760
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-- 70
K C+I+++TP RL ++ K + + R YLVLDEAD++F++G +P V++
Sbjct: 349 KAGCEIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFDLG-----FEPQVRSIVGQI 403
Query: 71 -PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 129
P LFSAT+P VE+LAR I+ D +RV VG A+E I Q + S+ KL L
Sbjct: 404 RPDRQTLLFSATMPWKVEKLAREILSDPIRVTVGEVGMANEDITQVVNVIPSDAEKLPWL 463
Query: 130 RQSFAESLNPP-VLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ ++ VL+F K E+ +L + + +H D Q
Sbjct: 464 LEKLPGMIDEGDVLVFASKKATVDEIEAQLTLNSFKVAALHGDKDQ 509
>gi|158284342|ref|XP_306246.4| Anopheles gambiae str. PEST AGAP012523-PA [Anopheles gambiae str.
PEST]
gi|157021090|gb|EAA02455.4| AGAP012523-PA [Anopheles gambiae str. PEST]
Length = 720
Score = 85.9 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 56/164 (34%), Positives = 89/164 (54%), Gaps = 9/164 (5%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSI 73
+I+++TP R+ ++ K +L RV YLVLDEADK+F +G +P V++ N P
Sbjct: 328 EIVVATPGRMIDMVKIKATNLQRVTYLVLDEADKMFNMG-----FEPQVRSICNHIRPDR 382
Query: 74 VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 133
LFSAT VE+LAR ++ D VR+I G A+ + Q+++ + + K L +
Sbjct: 383 QTLLFSATFKKRVEKLARDVLTDPVRIIHGDLGEANSDVTQRIILLPTVQSKWNWLLTNL 442
Query: 134 AESLNP-PVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L+ VLIFV K A+E L D ++H D+ Q++
Sbjct: 443 VKMLSEGSVLIFVTKKADAEETANNLRLKDNDVVLLHGDMDQSE 486
>gi|413955931|gb|AFW88580.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 768
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 88/167 (52%), Gaps = 9/167 (5%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-- 70
K C+++I+TP RL ++ K + + R YLVLDEAD++F++G +P +++
Sbjct: 340 KAGCEVVIATPGRLIDLLKMKALKMFRATYLVLDEADRMFDLG-----FEPQIRSIVGQI 394
Query: 71 -PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 129
P LFSAT+P VE LAR I+ D +RV VG+ A+E IKQ + S+ K+ L
Sbjct: 395 RPGRQTLLFSATMPYKVERLAREILTDPIRVTVGQVGGANEDIKQVVNVIPSDAEKMPWL 454
Query: 130 RQSFAESL-NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
+ + + VL+F K R E+ EL R +H D Q
Sbjct: 455 LEKLPGMIDDGDVLVFASKKARVDEIERELNQRGFRIAALHGDKDQA 501
>gi|356572801|ref|XP_003554554.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 24-like [Glycine
max]
Length = 768
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-- 70
K C+I+++TP RL ++ K + + R YLVLDEAD++F++G +P V++
Sbjct: 347 KAGCEIVVATPGRLIDMLKMKALTMMRATYLVLDEADRMFDLG-----FEPQVRSIVGQI 401
Query: 71 -PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 129
P LFSAT+P VE+LAR I+ D +RV VG A+E I Q + S+ KL L
Sbjct: 402 RPDRQTLLFSATMPRKVEKLAREILSDPIRVTVGEVGMANEDITQVVHVIPSDSEKLPWL 461
Query: 130 RQSFAESLNPP-VLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ E ++ L+F K E+ +LA + +H D Q
Sbjct: 462 LEKLPEMIDQGDTLVFASKKATVDEIESQLAQRGFKVAALHGDKDQ 507
>gi|67624743|ref|XP_668654.1| DEAD box polypeptide, Y chromosome-related [Cryptosporidium hominis
TU502]
gi|54659828|gb|EAL38390.1| DEAD box polypeptide, Y chromosome-related [Cryptosporidium
hominis]
Length = 702
Score = 85.9 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 60/177 (33%), Positives = 98/177 (55%), Gaps = 9/177 (5%)
Query: 6 VRST--DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDP 63
VRS DL + S DI+++TP RLR I R K++L +++L+LDEAD++ ++G I
Sbjct: 324 VRSQIMDLDRGS-DIIVATPGRLRDLIDRGKVNLKLIKFLILDEADRMLDMG-FAPQIRE 381
Query: 64 VVKACSNPSIVRS----LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFA 119
+V+ P + +FSAT P +++LA+ +H+ + + VGR S SI Q++V+A
Sbjct: 382 IVEDSEMPHSLDGRQTVMFSATFPREIQQLAKDFLHNYIFLTVGRVGATSGSIVQRVVYA 441
Query: 120 GSEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E+ K L + E ++FV+ K RA ++ L + A IH D SQ +
Sbjct: 442 -EEDHKPRLLVKLLLEQGEGLTVVFVEMKRRADQIEDFLIDQNFPAVSIHGDRSQQE 497
>gi|340897453|gb|EGS17043.1| ATP dependent RNA helicase-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 796
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 106/199 (53%), Gaps = 33/199 (16%)
Query: 8 STDLSKFSCDILISTP------LRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHI 61
+ D DIL++TP L R + +KI L V L+LDEAD L + K
Sbjct: 416 NADKPPTRVDILVTTPKILLNFLTGRSSGGTRKI-LPTVRSLILDEADVLLDT-IFRKQT 473
Query: 62 DPVVKACSNPSIVRSLFSATLPDFVEEL------ARSIMHDA----VRVIVGRKNTASES 111
+ +AC+N + + +SAT+ +E L R ++A +R++VG K+TA +
Sbjct: 474 MGIWRACTNTDVSLTCWSATMASSIEALITKQLDRRYRQYNASRPLIRLVVGLKDTAVPN 533
Query: 112 IKQKLVFAGSEEGKLLALRQ-----SFAES---LNPPVLIFVQSKDRAKELYGELAFD-D 162
I KL++ +E+GKLLA+RQ S A+S L PP L+F Q+ +RA+ L+ EL +D
Sbjct: 534 ITHKLIYTATEKGKLLAIRQLLHPVSGADSGPPLRPPFLVFTQTIERAQALFEELQYDIP 593
Query: 163 IRAG------VIHSDLSQT 175
I AG V+HS L+ T
Sbjct: 594 IEAGGPARLAVLHSSLTDT 612
>gi|406863084|gb|EKD16132.1| ATP-dependent RNA helicase DED1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 689
Score = 85.9 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 9/176 (5%)
Query: 6 VRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVV 65
+R+ + + CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V
Sbjct: 315 LRAMERDQKCCDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMG-FEPQIRRIV 373
Query: 66 KACSNPSIVRS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSE 122
+ P + +FSAT P ++ LAR + D V + VGR + SE+I QK+ +
Sbjct: 374 EGEDMPGVQNRQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVEDP 433
Query: 123 EGK--LLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + LL + + L LIFV++K A L L + A IH D +Q +
Sbjct: 434 DKRSVLLDILHTHGAGL---TLIFVETKRMADSLSDFLINQNFPATSIHGDRTQRE 486
>gi|418407317|ref|ZP_12980635.1| dead-box ATP-dependent RNA helicase [Agrobacterium tumefaciens 5A]
gi|358006461|gb|EHJ98785.1| dead-box ATP-dependent RNA helicase [Agrobacterium tumefaciens 5A]
Length = 492
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 91/164 (55%), Gaps = 6/164 (3%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKACSNPS 72
D+L++TP RL I R I LS+V YLVLDEAD++ ++G + L+ I +V A
Sbjct: 125 GTDVLVATPGRLLDLIARNAISLSKVTYLVLDEADQMLDLGFIHDLRKISKMVPAKRQ-- 182
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
LFSAT+P + ELA + + D ++V V A++ ++Q + F + K L++S
Sbjct: 183 --TLLFSATMPKAISELASNFLTDPIKVEVTPPGKAADKVEQYVHFVAGKNDKTDLLKKS 240
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E+ + ++F+++K A++LY L + IH + SQ Q
Sbjct: 241 LNENPDGRSIVFLRTKHGAEKLYKHLEHIGFKVASIHGNKSQGQ 284
>gi|320538877|ref|ZP_08038553.1| putative RNA helicase [Serratia symbiotica str. Tucson]
gi|320031037|gb|EFW13040.1| putative RNA helicase [Serratia symbiotica str. Tucson]
Length = 437
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 92/163 (56%), Gaps = 6/163 (3%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL L + + +DLS++E LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDILVATPGRL-LDLEQNAVDLSKIEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 178
Query: 73 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
++L FSAT D ++ LA ++H+ V V R+NTASE I+Q + F + + L L Q
Sbjct: 179 KRQNLLFSATFSDDIKALANKLLHNPASVEVARRNTASEQIEQSVYFVDKKRKREL-LSQ 237
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
VL+F ++K A L +L D I A IH + SQ
Sbjct: 238 MIGAGDWKQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQ 280
>gi|85860953|ref|YP_463155.1| superfamily II DNA/RNA helicase [Syntrophus aciditrophicus SB]
gi|85724044|gb|ABC78987.1| superfamily II DNA and RNA helicases [Syntrophus aciditrophicus SB]
Length = 572
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 99/174 (56%), Gaps = 7/174 (4%)
Query: 5 LVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPV 64
+V T+ + ++++TP RL IRR +DLS V ++VLDEAD++ ++G ++ +
Sbjct: 112 IVSQTEELRKGAQVVVATPGRLHDLIRRGAVDLSGVSWVVLDEADEMLQMG-FQDELNAI 170
Query: 65 VKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEG 124
+ A + S LFSAT+P V +A + M D + +IVGR+N +E++ + + S
Sbjct: 171 L-AVTPDSKNTLLFSATMPREVAAIAANYMKDPLEIIVGRRNAGAENVDH-IYYVVSARH 228
Query: 125 KLLALRQSFAESLNPPV--LIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ ALR+ +NP + +IF +++ +E+ +L D A +H DLSQ+Q
Sbjct: 229 RYQALRR--IADMNPELYAIIFCRTRLETREIVDKLIEDGYSADALHGDLSQSQ 280
>gi|325293690|ref|YP_004279554.1| dead-box ATP-dependent RNA helicase [Agrobacterium sp. H13-3]
gi|325061543|gb|ADY65234.1| dead-box ATP-dependent RNA helicase [Agrobacterium sp. H13-3]
Length = 500
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 91/164 (55%), Gaps = 6/164 (3%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKACSNPS 72
D+L++TP RL I R I LS+V YLVLDEAD++ ++G + L+ I +V A
Sbjct: 133 GTDVLVATPGRLLDLIARNAISLSKVTYLVLDEADQMLDLGFIHDLRKISKMVPAKRQ-- 190
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
LFSAT+P + ELA + + D ++V V A++ ++Q + F + K L++S
Sbjct: 191 --TLLFSATMPKAISELASNFLTDPIKVEVTPPGKAADKVEQYVHFVAGKNDKTDLLKKS 248
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E+ + ++F+++K A++LY L + IH + SQ Q
Sbjct: 249 LNENPDGRSIVFLRTKHGAEKLYKHLEHIGFKVASIHGNKSQGQ 292
>gi|66357412|ref|XP_625884.1| Dbp1p, eIF4a-1 family RNA SFII helicase (DEXDC+HELICc)
[Cryptosporidium parvum Iowa II]
gi|46226846|gb|EAK87812.1| Dbp1p, eIF4a-1 family RNA SFII helicase (DEXDC+HELICc)
[Cryptosporidium parvum Iowa II]
gi|323510023|dbj|BAJ77905.1| cgd4_3000 [Cryptosporidium parvum]
Length = 702
Score = 85.9 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 60/177 (33%), Positives = 98/177 (55%), Gaps = 9/177 (5%)
Query: 6 VRST--DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDP 63
VRS DL + S DI+++TP RLR I R K++L +++L+LDEAD++ ++G I
Sbjct: 324 VRSQIMDLDRGS-DIIVATPGRLRDLIDRGKVNLKLIKFLILDEADRMLDMG-FAPQIRE 381
Query: 64 VVKACSNPSIVRS----LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFA 119
+V+ P + +FSAT P +++LA+ +H+ + + VGR S SI Q++V+A
Sbjct: 382 IVEDSEMPHSLDGRQTVMFSATFPREIQQLAKDFLHNYIFLTVGRVGATSGSIVQRVVYA 441
Query: 120 GSEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E+ K L + E ++FV+ K RA ++ L + A IH D SQ +
Sbjct: 442 -EEDHKPRLLVKLLLEQGEGLTVVFVEMKRRADQIEDFLIDQNFPAVSIHGDRSQQE 497
>gi|393221949|gb|EJD07433.1| ATP-dependent RNA helicase ded-1 [Fomitiporia mediterranea MF3/22]
Length = 628
Score = 85.9 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 58/164 (35%), Positives = 86/164 (52%), Gaps = 5/164 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L +TP RL I R +I L+ + YLVLDEAD++ ++G I +V+ P +
Sbjct: 295 CDLLAATPGRLVDLIERGRISLANIRYLVLDEADRMLDMG-FEPQIRRIVQGEDMPDVHN 353
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LA+ + D V + VGR + SE+I QK+ + + K L
Sbjct: 354 RQTLMFSATFPRDIQILAKDFLKDYVFLSVGRVGSTSENITQKIEYV-EDPDKRSVLLDI 412
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
A + LIFV++K A L L + I A IH D SQ +
Sbjct: 413 LASQPSGLTLIFVETKKMADMLSDFLMVNQIPATSIHGDRSQRE 456
>gi|403415883|emb|CCM02583.1| predicted protein [Fibroporia radiculosa]
Length = 640
Score = 85.9 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 57/165 (34%), Positives = 91/165 (55%), Gaps = 7/165 (4%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L +TP RL I R +I L+ ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 306 CDLLSATPGRLVDLIERGRISLANIQYLVLDEADRMLDMG-FEPQIRRIVQGEDMPGVQA 364
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR M D V + VGR + SE+I QK+ + E+G ++
Sbjct: 365 RQTLMFSATFPRDIQVLARDFMKDYVFLSVGRVGSTSENITQKIEYV--EDGDKRSVLLD 422
Query: 133 FAESLNPPV-LIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ +P + L+FV++K A L L + + A IH D +Q +
Sbjct: 423 VLSAHDPGLTLVFVETKRMADMLSDFLLTNHLPATSIHGDRTQRE 467
>gi|212537643|ref|XP_002148977.1| ATP dependent RNA helicase (Dbp1), putative [Talaromyces marneffei
ATCC 18224]
gi|210068719|gb|EEA22810.1| ATP dependent RNA helicase (Dbp1), putative [Talaromyces marneffei
ATCC 18224]
Length = 692
Score = 85.9 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 54/164 (32%), Positives = 86/164 (52%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L+ ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 334 CDLLVATPGRLVDLIERGRISLTNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPQVND 392
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + D V + VGR + SE+I Q++ + + + + L
Sbjct: 393 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQRIEYVEDHDKRSVLLDIL 452
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
LIFV++K A L L + A IH D +Q +
Sbjct: 453 HTHGSTGLTLIFVETKRMADSLCDFLINQNFPATAIHGDRTQRE 496
>gi|270260820|ref|ZP_06189093.1| ATP-dependent RNA helicase [Serratia odorifera 4Rx13]
gi|270044304|gb|EFA17395.1| ATP-dependent RNA helicase [Serratia odorifera 4Rx13]
Length = 452
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 88/164 (53%), Gaps = 7/164 (4%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + +DLS++E LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 73 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
R LFSAT D ++ LA ++H+ V V R+NTASE I+Q + F + + L L
Sbjct: 179 AKRQNLLFSATFSDDIKALANKLLHNPASVEVARRNTASEQIEQSVHFVDKKRKREL-LS 237
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
Q E VL+F ++K A L +L D I A IH + SQ
Sbjct: 238 QMIGEGDWKQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQ 281
>gi|260433348|ref|ZP_05787319.1| dead/deah box helicase [Silicibacter lacuscaerulensis ITI-1157]
gi|260417176|gb|EEX10435.1| dead/deah box helicase [Silicibacter lacuscaerulensis ITI-1157]
Length = 416
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 88/164 (53%), Gaps = 7/164 (4%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL + R +DL V LVLDEAD++ ++G + L+ I P +
Sbjct: 125 GTDILVATPGRLIDLMDRGAVDLGSVRRLVLDEADQMLDMGFIHALRRIAPELGTPRQ-- 182
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
LFSAT+P +EEL+R+ + + RV V A++ I Q + F S+ GK LRQ
Sbjct: 183 --TMLFSATMPKQMEELSRAYLTNPQRVQVSPPGKAADKITQSVHFV-SKPGKPEKLRQI 239
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
++ + L+F ++K A++L L D A IH + SQ Q
Sbjct: 240 LSQDTDALTLVFARTKHGAEKLMKGLVADGYNAASIHGNKSQGQ 283
>gi|121706879|ref|XP_001271659.1| ATP dependent RNA helicase (Dbp1), putative [Aspergillus clavatus
NRRL 1]
gi|134034088|sp|A1CH78.1|DED1_ASPCL RecName: Full=ATP-dependent RNA helicase ded1
gi|119399807|gb|EAW10233.1| ATP dependent RNA helicase (Dbp1), putative [Aspergillus clavatus
NRRL 1]
Length = 681
Score = 85.5 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 56/164 (34%), Positives = 85/164 (51%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L + YLVLDEAD++ ++G I +V+ PS+
Sbjct: 327 CDLLVATPGRLVDLIERGRISLVNINYLVLDEADRMLDMG-FEPQIRRIVEGEDMPSVNE 385
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + D V + VGR + SE+I QK+ + + + + L
Sbjct: 386 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVEDVDKRSVLLDIL 445
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ LIFV++K A L L A IH D +Q +
Sbjct: 446 HTHGTSGLTLIFVETKRMADALSDFLINQRFPATAIHGDRTQRE 489
>gi|260063169|ref|YP_003196249.1| ATP-dependent RNA helicase [Robiginitalea biformata HTCC2501]
gi|88783263|gb|EAR14435.1| ATP-dependent RNA helicase [Robiginitalea biformata HTCC2501]
Length = 579
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 91/166 (54%), Gaps = 7/166 (4%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
K I+++TP R++ I RK D+S + Y VLDEAD++ +G +D + A + S
Sbjct: 107 KNGGQIIVATPGRMKDMISRKLADISSIGYCVLDEADEMLNMGFYEDLVDILSHAPKDKS 166
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
LFSAT+P+ V +AR MH V VG +N A S++ + + + ALR+
Sbjct: 167 TW--LFSATMPNAVARIARDFMHQPAEVTVGTRNEAIASVQHEYYTVAGRD-RYPALRR- 222
Query: 133 FAESLNPPV--LIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
A++ NP + +IF ++K +++ +L D AG +H DLSQ Q
Sbjct: 223 LADA-NPGLFSVIFCRTKRDTQKVAEKLIEDGYNAGALHGDLSQQQ 267
>gi|224064557|ref|XP_002301515.1| predicted protein [Populus trichocarpa]
gi|222843241|gb|EEE80788.1| predicted protein [Populus trichocarpa]
Length = 807
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 89/166 (53%), Gaps = 9/166 (5%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-- 70
K C+I+I+TP RL ++ K +++SR YLVLDEAD++F++G +P +++
Sbjct: 346 KAGCEIVIATPGRLIDMLKMKALNMSRATYLVLDEADRMFDLG-----FEPQIRSIVGQI 400
Query: 71 -PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 129
P LFSAT+P +E+LAR I+ D VRV VG A+E I Q + S+ KL L
Sbjct: 401 RPDRQTLLFSATMPRKIEKLAREILTDPVRVTVGEVGRANEDITQVVQVIPSDAEKLPWL 460
Query: 130 RQSFAESLNPP-VLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ ++ VL+F K ++ +LA + +H D Q
Sbjct: 461 IEKLPGMIDEGDVLVFASKKATVDDIESQLAQKAFKVAALHGDKDQ 506
>gi|381150962|ref|ZP_09862831.1| DNA/RNA helicase, superfamily II [Methylomicrobium album BG8]
gi|380882934|gb|EIC28811.1| DNA/RNA helicase, superfamily II [Methylomicrobium album BG8]
Length = 425
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 91/161 (56%), Gaps = 5/161 (3%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
CDI+++TP RL + +K I+LS +E LVLDEAD++ ++G L I ++ P
Sbjct: 125 GCDIVVATPGRLLDHLLQKNIELSHLEILVLDEADRMLDMG-FLPDIRKIIGHL--PRQK 181
Query: 75 RS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 133
+S LFSAT P+ + LA+ ++H+ V V NT +++IK+ L + ++E K L
Sbjct: 182 QSLLFSATFPEEIRGLAKQLLHEPAEVSVAPHNTTADNIKE-LCYGIAKERKRGLLSYLI 240
Query: 134 AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ VL+FV++K A L +L D IR +H D SQ
Sbjct: 241 GSNNWKQVLVFVRTKHGADRLEKQLVKDGIRTAALHGDKSQ 281
>gi|342878477|gb|EGU79814.1| hypothetical protein FOXB_09673 [Fusarium oxysporum Fo5176]
Length = 670
Score = 85.5 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 58/166 (34%), Positives = 89/166 (53%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 318 CDLLVATPGRLVDLIERGRISLQNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPQVQD 376
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + D + + VGR + SE+I QK+ + + + LL +
Sbjct: 377 RQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGSTSENITQKVEYVEDVDKRSVLLDIL 436
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
S A L LIFV++K A L L + A IH D +Q +
Sbjct: 437 HSNANGL---TLIFVETKRMADSLSDFLINQNFPATSIHGDRTQRE 479
>gi|70994563|ref|XP_752059.1| ATP dependent RNA helicase (Dbp1) [Aspergillus fumigatus Af293]
gi|74671260|sp|Q4WP13.1|DED1_ASPFU RecName: Full=ATP-dependent RNA helicase ded1
gi|66849693|gb|EAL90021.1| ATP dependent RNA helicase (Dbp1), putative [Aspergillus fumigatus
Af293]
Length = 674
Score = 85.5 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 55/164 (33%), Positives = 86/164 (52%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P++
Sbjct: 326 CDLLVATPGRLVDLIERGRISLVNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPNVNE 384
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + D V + VGR + SE+I QK+ + + + + L
Sbjct: 385 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVEDHDKRSVLLDIL 444
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ LIFV++K A L L A IH D +Q +
Sbjct: 445 HTHGTSGLTLIFVETKRMADALSDFLLNQRFPATAIHGDRTQRE 488
>gi|159125027|gb|EDP50144.1| ATP dependent RNA helicase (Dbp1), putative [Aspergillus fumigatus
A1163]
Length = 674
Score = 85.5 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 55/164 (33%), Positives = 86/164 (52%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P++
Sbjct: 326 CDLLVATPGRLVDLIERGRISLVNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPNVNE 384
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + D V + VGR + SE+I QK+ + + + + L
Sbjct: 385 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVEDHDKRSVLLDIL 444
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ LIFV++K A L L A IH D +Q +
Sbjct: 445 HTHGTSGLTLIFVETKRMADALSDFLLNQRFPATAIHGDRTQRE 488
>gi|119500998|ref|XP_001267256.1| ATP dependent RNA helicase (Dbp1), putative [Neosartorya fischeri
NRRL 181]
gi|134034091|sp|A1CXK7.1|DED1_NEOFI RecName: Full=ATP-dependent RNA helicase ded1
gi|119415421|gb|EAW25359.1| ATP dependent RNA helicase (Dbp1), putative [Neosartorya fischeri
NRRL 181]
Length = 676
Score = 85.5 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 55/164 (33%), Positives = 86/164 (52%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P++
Sbjct: 328 CDLLVATPGRLVDLIERGRISLVNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPNVNE 386
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + D V + VGR + SE+I QK+ + + + + L
Sbjct: 387 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVEDHDKRSVLLDIL 446
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ LIFV++K A L L A IH D +Q +
Sbjct: 447 HTHGTSGLTLIFVETKRMADALSDFLLNQRFPATAIHGDRTQRE 490
>gi|358392270|gb|EHK41674.1| hypothetical protein TRIATDRAFT_173488, partial [Trichoderma
atroviride IMI 206040]
Length = 681
Score = 85.5 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 59/166 (35%), Positives = 89/166 (53%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P++
Sbjct: 324 CDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPNVND 382
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + D V + VGR + SE+I QK+ F + + LL +
Sbjct: 383 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEFVEDIDKRSVLLDIL 442
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ A L LIFV++K A L L A IH D +Q +
Sbjct: 443 HTHAGGL---TLIFVETKRMADSLSDFLINQSFPATSIHGDRTQRE 485
>gi|421782261|ref|ZP_16218719.1| ATP-dependent RNA helicase [Serratia plymuthica A30]
gi|407755624|gb|EKF65749.1| ATP-dependent RNA helicase [Serratia plymuthica A30]
Length = 454
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 88/164 (53%), Gaps = 7/164 (4%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + +DLS++E LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 73 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
R LFSAT D ++ LA ++H+ V V R+NTASE I+Q + F + + L L
Sbjct: 179 AKRQNLLFSATFSDDIKALANKLLHNPASVEVARRNTASEQIEQSVHFVDKKRKREL-LS 237
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
Q E VL+F ++K A L +L D I A IH + SQ
Sbjct: 238 QMIGEGDWKQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQ 281
>gi|212275354|ref|NP_001130628.1| uncharacterized protein LOC100191727 [Zea mays]
gi|194689682|gb|ACF78925.1| unknown [Zea mays]
gi|413943771|gb|AFW76420.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 614
Score = 85.5 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 63/176 (35%), Positives = 95/176 (53%), Gaps = 11/176 (6%)
Query: 10 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
DL K D+L++TP RL + R +I L ++YLV+DEAD++ +G I +V +
Sbjct: 212 DLEK-GVDLLVATPGRLVDLVERSRISLEAIKYLVMDEADRMLNMG-FEPQIRKIVDMMN 269
Query: 70 NP-SIVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVF--AGSEEG 124
P VR LFSAT P ++ LA +H+ + V VGR ++++ I QK+ F G + G
Sbjct: 270 MPKKSVRQTMLFSATFPPEIQRLATDFLHNYIFVTVGRVGSSTDLIDQKIEFVNGGEKRG 329
Query: 125 KLLAL--RQSFAESLN--PPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
LL + +QS S N P L+FV++K A L L + A IH D +Q +
Sbjct: 330 FLLDILQKQSVGLSKNKQPLTLVFVETKREADSLQYCLQSNGFSATSIHGDRTQQE 385
>gi|302911254|ref|XP_003050452.1| hypothetical protein NECHADRAFT_71876 [Nectria haematococca mpVI
77-13-4]
gi|256731389|gb|EEU44739.1| hypothetical protein NECHADRAFT_71876 [Nectria haematococca mpVI
77-13-4]
Length = 688
Score = 85.5 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 59/166 (35%), Positives = 89/166 (53%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ PS
Sbjct: 333 CDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPSTQD 391
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + D V + VGR + SE+I QK+ + + + LL +
Sbjct: 392 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVEDVDKRSVLLDIL 451
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ A L LIFV++K A L L + A IH D +Q +
Sbjct: 452 HTHAGGL---TLIFVETKRMADSLSDFLINQNFPATSIHGDRTQRE 494
>gi|430812755|emb|CCJ29835.1| unnamed protein product [Pneumocystis jirovecii]
Length = 631
Score = 85.5 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 57/164 (34%), Positives = 87/164 (53%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L +TP RL I R +I LS ++YLVLDEAD++ ++G I +V+ P++
Sbjct: 294 CDMLTATPGRLVDLIERGRISLSNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPNVEH 352
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + D V + VGR + SE+I QK+ + + K + L
Sbjct: 353 RQTLMFSATFPKDIQILARDFLKDYVFLSVGRVGSTSENITQKIEYVEDMDKKSVLLDIL 412
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ LIFV++K A L L + A IH D +Q +
Sbjct: 413 HSMPRGGLTLIFVETKRMADTLSDFLLSSNFPATSIHGDRTQRE 456
>gi|295672658|ref|XP_002796875.1| ATP-dependent RNA helicase DED1 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226282247|gb|EEH37813.1| ATP-dependent RNA helicase DED1 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 683
Score = 85.5 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 54/164 (32%), Positives = 89/164 (54%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI-V 74
C++L++TP RL + R +I LS ++YLVLDEAD++ ++G I +V+ P
Sbjct: 332 CNVLVATPGRLVDMMERGRISLSHIQYLVLDEADRMLDMG-FEPQIRRIVQGSDMPDKHF 390
Query: 75 RS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
R +FSAT P +++LA + D + + VGR + SE+I Q+++ S++ K AL
Sbjct: 391 RQTLMFSATFPPDIQKLAEEFLKDHIFLSVGRVGSTSENITQRVIECDSDKDKDSALLDI 450
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L+FV++K +A L L + A IH D +Q +
Sbjct: 451 LCSDSTGLTLVFVETKRQADMLSDFLLDHRLPATAIHGDRTQRE 494
>gi|170053024|ref|XP_001862487.1| ATP-dependent RNA helicase p62 [Culex quinquefasciatus]
gi|167873709|gb|EDS37092.1| ATP-dependent RNA helicase p62 [Culex quinquefasciatus]
Length = 935
Score = 85.5 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 54/163 (33%), Positives = 92/163 (56%), Gaps = 5/163 (3%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
+++I+TP RL + R +L R YLVLDEAD++ ++G I +++ P
Sbjct: 380 EVVIATPGRLIDFLERGITNLRRCTYLVLDEADRMLDMG-FEPQIRKIIEQI-RPDRQVL 437
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQ--KLVFAGSEEGKLLALRQSF 133
++SAT P V+ LA +HD +++ VG N +A+ +I Q + +EGKLL+L +
Sbjct: 438 MWSATWPKEVQALAEDFLHDYIQINVGSLNLSANHNIHQIVDICEENEKEGKLLSLLKEI 497
Query: 134 AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
A +N ++IFV++K + ++L + D A IH D SQ++
Sbjct: 498 ASDVNNKIIIFVETKKKVEDLLKNIVRDGYGATSIHGDKSQSE 540
>gi|417857754|ref|ZP_12502811.1| ATP-dependent RNA helicase [Agrobacterium tumefaciens F2]
gi|338823758|gb|EGP57725.1| ATP-dependent RNA helicase [Agrobacterium tumefaciens F2]
Length = 491
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 91/164 (55%), Gaps = 6/164 (3%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKACSNPS 72
DIL++TP RL I R I LS+V YLVLDEAD++ ++G + L+ I +V A
Sbjct: 125 GTDILVATPGRLLDLIARNAISLSKVTYLVLDEADQMLDLGFIHDLRKISRMVPAKRQ-- 182
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
LFSAT+P + +L+ S + D V+V V A++ ++Q + F + K L++S
Sbjct: 183 --TLLFSATMPKAIADLSHSYLTDPVKVEVTPPGKAADKVEQYVHFVAGKNDKTDLLKKS 240
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E+ + ++F+++K A++LY L + IH + SQ Q
Sbjct: 241 LNENPDGRAIVFLRTKHGAEKLYKHLEHIGFKVASIHGNKSQGQ 284
>gi|333926166|ref|YP_004499745.1| DEAD/DEAH box helicase [Serratia sp. AS12]
gi|333931119|ref|YP_004504697.1| DEAD/DEAH box helicase domain-containing protein [Serratia
plymuthica AS9]
gi|386327989|ref|YP_006024159.1| DEAD/DEAH box helicase [Serratia sp. AS13]
gi|333472726|gb|AEF44436.1| DEAD/DEAH box helicase domain protein [Serratia plymuthica AS9]
gi|333490226|gb|AEF49388.1| DEAD/DEAH box helicase domain protein [Serratia sp. AS12]
gi|333960322|gb|AEG27095.1| DEAD/DEAH box helicase domain protein [Serratia sp. AS13]
Length = 454
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 88/164 (53%), Gaps = 7/164 (4%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + +DLS++E LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDILVATPGRLLDLEHQHAVDLSKIEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 73 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
R LFSAT D ++ LA ++H+ V V R+NTASE I+Q + F + + L L
Sbjct: 179 AKRQNLLFSATFSDEIKGLANKLLHNPASVEVARRNTASEQIEQSVHFVDKKRKREL-LS 237
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
Q E VL+F ++K A L +L D I A IH + SQ
Sbjct: 238 QMIGEGDWKQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQ 281
>gi|240281206|gb|EER44709.1| ATP-dependent RNA helicase DED1 [Ajellomyces capsulatus H143]
gi|325092298|gb|EGC45608.1| ATP-dependent RNA helicase DED1 [Ajellomyces capsulatus H88]
Length = 694
Score = 85.5 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 54/164 (32%), Positives = 90/164 (54%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI-V 74
C++L++TP RL + R +I L+ ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 337 CNVLVATPGRLVDMMERGRISLAHIQYLVLDEADRMLDMG-FEPQIRRIVQGSDMPDKHM 395
Query: 75 RS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
R +FSAT P +++LA + D + + VGR + SE+I Q++V S++ K AL
Sbjct: 396 RQTLMFSATFPPDIQKLAEEFLKDHIFLSVGRVGSTSENITQRIVECESDKDKDSALLDI 455
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L+FV++K +A L L + A IH D +Q +
Sbjct: 456 LCSDSTGLTLVFVETKRQADMLSDFLLDHRLPATAIHGDRTQRE 499
>gi|225562366|gb|EEH10645.1| ATP-dependent RNA helicase DED1 [Ajellomyces capsulatus G186AR]
Length = 694
Score = 85.5 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 54/164 (32%), Positives = 90/164 (54%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI-V 74
C++L++TP RL + R +I L+ ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 337 CNVLVATPGRLVDMMERGRISLAHIQYLVLDEADRMLDMG-FEPQIRRIVQGSDMPDKHM 395
Query: 75 RS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
R +FSAT P +++LA + D + + VGR + SE+I Q++V S++ K AL
Sbjct: 396 RQTLMFSATFPPDIQKLAEEFLKDHIFLSVGRVGSTSENITQRIVECESDKDKDSALLDI 455
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L+FV++K +A L L + A IH D +Q +
Sbjct: 456 LCSDSTGLTLVFVETKRQADMLSDFLLDHRLPATAIHGDRTQRE 499
>gi|154279136|ref|XP_001540381.1| ATP-dependent RNA helicase ded1 [Ajellomyces capsulatus NAm1]
gi|160380637|sp|A6R3L3.1|DED1_AJECN RecName: Full=ATP-dependent RNA helicase DED1
gi|150412324|gb|EDN07711.1| ATP-dependent RNA helicase ded1 [Ajellomyces capsulatus NAm1]
Length = 694
Score = 85.5 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 54/164 (32%), Positives = 90/164 (54%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI-V 74
C++L++TP RL + R +I L+ ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 337 CNVLVATPGRLVDMMERGRISLAHIQYLVLDEADRMLDMG-FEPQIRRIVQGSDMPDKHM 395
Query: 75 RS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
R +FSAT P +++LA + D + + VGR + SE+I Q++V S++ K AL
Sbjct: 396 RQTLMFSATFPPDIQKLAEEFLKDHIFLSVGRVGSTSENITQRIVECESDKDKDSALLDI 455
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L+FV++K +A L L + A IH D +Q +
Sbjct: 456 LCSDSTGLTLVFVETKRQADMLSDFLLDHRLPATAIHGDRTQRE 499
>gi|344201374|ref|YP_004786517.1| DEAD/DEAH box helicase [Muricauda ruestringensis DSM 13258]
gi|343953296|gb|AEM69095.1| DEAD/DEAH box helicase domain protein [Muricauda ruestringensis DSM
13258]
Length = 586
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 94/166 (56%), Gaps = 7/166 (4%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
K I+++TP R++ I R+ +D+S+++Y VLDEAD++ +G + I ++
Sbjct: 120 KKGAQIVVATPGRMKDMIGRRMVDISKIDYCVLDEADEMLNMG-FFEDIKDILSNTPKEK 178
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ LFSAT+P V +A+ M++ V + VG KN + +++ + G + + AL++
Sbjct: 179 LTW-LFSATMPKEVATIAKKFMNNPVEITVGSKNAGASTVQHEYYVVGGRD-RYAALKR- 235
Query: 133 FAESLNPPV--LIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
A++ NP + ++F ++K + + +L D AG +H DLSQ Q
Sbjct: 236 LADA-NPGIFSVVFCRTKRDTQRVAEKLIEDGYNAGALHGDLSQNQ 280
>gi|253990397|ref|YP_003041753.1| putative atp-dependent rna helicase rhle [Photorhabdus asymbiotica]
gi|253781847|emb|CAQ85010.1| putative atp-dependent rna helicase rhle [Photorhabdus asymbiotica]
Length = 444
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 92/164 (56%), Gaps = 7/164 (4%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + +DLSRVE LVLDEAD++ ++G + I V+ P
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVDLSRVEILVLDEADRMLDMG-FIHDIRRVLNKLP-PK 180
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSE-EGKLLALRQ 131
LFSAT D ++ LA ++H+ V V V R+N+ASE I+Q + F + +G+LL+
Sbjct: 181 RQNLLFSATFSDEIKNLASKLLHNPVSVEVARRNSASEQIEQFVHFVDKKRKGELLSF-- 238
Query: 132 SFAESLN-PPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
S N VL+F ++K A L +L D + A IH + SQ
Sbjct: 239 -LIGSRNWQQVLVFTRTKHGANRLAEQLNKDGVTASAIHGNKSQ 281
>gi|297828467|ref|XP_002882116.1| hypothetical protein ARALYDRAFT_483908 [Arabidopsis lyrata subsp.
lyrata]
gi|297327955|gb|EFH58375.1| hypothetical protein ARALYDRAFT_483908 [Arabidopsis lyrata subsp.
lyrata]
Length = 739
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 87/167 (52%), Gaps = 9/167 (5%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-- 70
K C+I+++TP RL ++ K + + R YLVLDEAD++F++G +P V++
Sbjct: 350 KAGCEIVVATPGRLIDMLKIKALTMMRASYLVLDEADRMFDLG-----FEPQVRSIVGQI 404
Query: 71 -PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 129
P LFSAT+P VE+LAR I+ D +RV VG A+E I Q + S+ KL L
Sbjct: 405 RPDRQTLLFSATMPWKVEKLAREILSDPIRVTVGEVGMANEDITQVVNVIPSDAEKLPWL 464
Query: 130 RQSFAESLNPP-VLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
+ ++ VL+F K E+ +L + + +H D Q
Sbjct: 465 LEKLPGMIDEGDVLVFASKKATVDEIEAQLTLNSFKVAALHGDKDQA 511
>gi|320590131|gb|EFX02574.1| ATP dependent RNA helicase [Grosmannia clavigera kw1407]
Length = 713
Score = 85.5 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 88/166 (53%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 354 CDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPGVNE 412
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + D V + VGR + SE+I QK+ + + + LL +
Sbjct: 413 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVEDNDKRSVLLDIL 472
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L LIFV++K A L L + A IH D +Q +
Sbjct: 473 HTHGAGL---TLIFVETKRMADSLSDFLINQNFPATSIHGDRTQRE 515
>gi|157369574|ref|YP_001477563.1| ATP-dependent RNA helicase RhlE [Serratia proteamaculans 568]
gi|157321338|gb|ABV40435.1| DEAD/DEAH box helicase domain protein [Serratia proteamaculans 568]
Length = 456
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 89/164 (54%), Gaps = 7/164 (4%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ D+L++TP RL ++ +DLS++E LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDVLVATPGRLLDLEHQRAVDLSKIEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 73 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
R LFSAT D ++ LA ++H+ V V R+NTASE I+Q + F + + L L
Sbjct: 179 AKRQNLLFSATFSDDIKGLANKLLHNPASVEVARRNTASEQIEQSVHFVDKKRKREL-LS 237
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
Q E VL+F ++K A L +L D I A IH + SQ
Sbjct: 238 QMIGEGDWKQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQ 281
>gi|357112553|ref|XP_003558073.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 24-like
[Brachypodium distachyon]
Length = 767
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 89/167 (53%), Gaps = 9/167 (5%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-- 70
K C+I+++TP RL ++ K + + R YLVLDEAD++F++G +P +++
Sbjct: 335 KAGCEIVVATPGRLIDLLKMKALKMFRATYLVLDEADRMFDLG-----FEPQIRSIVGQI 389
Query: 71 -PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 129
P LFSAT+P VE LAR I+ D +RV VG+ +A+E IKQ + S+ K+ L
Sbjct: 390 RPDRQTLLFSATMPYKVERLAREILSDPIRVTVGQVGSANEDIKQVVNVLPSDAEKMPWL 449
Query: 130 RQSFAESL-NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
+ + + VL+F K R E+ +L + +H D Q
Sbjct: 450 IEKMPGMIDDGDVLVFAAKKARVDEIENQLNQRGFKVAALHGDKDQA 496
>gi|312373386|gb|EFR21141.1| hypothetical protein AND_17503 [Anopheles darlingi]
Length = 615
Score = 85.1 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 55/164 (33%), Positives = 90/164 (54%), Gaps = 9/164 (5%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSI 73
+I+++TP R+ ++ K +L RV YLVLDEADK+F +G +P V++ N P
Sbjct: 216 EIVVATPGRMIDMVKMKATNLRRVTYLVLDEADKMFNMG-----FEPQVRSICNHIRPDR 270
Query: 74 VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 133
LFSAT VE+LAR ++ D VR+I G A+ + Q++V + + K L +
Sbjct: 271 QTLLFSATFKKRVEKLARDVLTDPVRIIHGDLGEANADVAQRVVLLPNVQAKWNWLLANL 330
Query: 134 AESLNP-PVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L+ VLIFV K A+++ L + ++H D+ Q++
Sbjct: 331 VQMLSEGSVLIFVTKKADAEQVANSLRVKENEVVLLHGDMDQSE 374
>gi|169850031|ref|XP_001831713.1| ATP-dependent RNA helicase ded-1 [Coprinopsis cinerea okayama7#130]
gi|116507149|gb|EAU90044.1| ATP-dependent RNA helicase ded-1 [Coprinopsis cinerea okayama7#130]
Length = 653
Score = 85.1 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 91/166 (54%), Gaps = 6/166 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L +TP RL I R +I L+ V+YLVLDEAD++ ++G I +V+ P +
Sbjct: 307 CDLLSATPGRLVDLIERGRISLANVKYLVLDEADRMLDMG-FEPQIRRIVQGEDMPGVND 365
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFA--GSEEGKLLALR 130
+FSAT P ++ LAR + D + + VGR + SE+I QK+ + G + LL +
Sbjct: 366 RQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGSTSENITQKIEYVEDGDKRSVLLDIL 425
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
S ++ L+FV++K A L L +++ A IH D +Q +
Sbjct: 426 ASQSKEDMGLTLVFVETKRMADMLSDFLIGNNMPATSIHGDRTQRE 471
>gi|336366770|gb|EGN95116.1| hypothetical protein SERLA73DRAFT_162691 [Serpula lacrymans var.
lacrymans S7.3]
Length = 662
Score = 85.1 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 55/164 (33%), Positives = 87/164 (53%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L +TP RL I R +I L+ + YLVLDEAD++ ++G I +V+ P +
Sbjct: 314 CDLLSATPGRLVDLIERGRISLANIRYLVLDEADRMLDMG-FEPQIRRIVQGEDMPGVHD 372
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LA+ + D V + VGR + SE+I QK+ F + + + L
Sbjct: 373 RQTLMFSATFPRDIQMLAKDFLKDYVFLSVGRVGSTSENITQKIEFVEDNDKRSVLLDIL 432
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+E L+FV++K A L L + + A IH D +Q +
Sbjct: 433 ASEPAGGLTLVFVETKRMADMLSDFLMANRLPATSIHGDRTQRE 476
>gi|71896321|ref|NP_001026097.1| ATP-dependent RNA helicase DDX42 [Gallus gallus]
gi|82194905|sp|Q5F485.1|DDX42_CHICK RecName: Full=ATP-dependent RNA helicase DDX42; AltName: Full=DEAD
box protein 42
gi|60098437|emb|CAH65049.1| hypothetical protein RCJMB04_2e15 [Gallus gallus]
Length = 944
Score = 85.1 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 55/167 (32%), Positives = 89/167 (53%), Gaps = 15/167 (8%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG------NLLKHIDPVVKACSN 70
+I++ TP RL +++K +L RV YLV DEAD++F++G ++ H+ P +
Sbjct: 378 EIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTL-- 435
Query: 71 PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L
Sbjct: 436 ------LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEIFPSGPSKWNWLT 489
Query: 131 QSFAE-SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ E + + VL+FV K A+EL L +D G++H D+ Q++
Sbjct: 490 RRLVEFTSSGSVLLFVTKKANAEELANNLKQEDHNLGLLHGDMDQSE 536
>gi|16611843|gb|AAL27386.1|AF426171_17 RhlE [Yersinia pestis]
Length = 421
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 89/163 (54%), Gaps = 5/163 (3%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + +DLS++E LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 73 IVRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
++ LFSAT D ++ LA ++H+ V V R+NTASE I Q + F + L L Q
Sbjct: 180 KRQNLLFSATFSDEIKGLASKLLHNPASVEVARRNTASEQIAQSVHFVDKNRKREL-LSQ 238
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
E VL+F ++K A L +L D I A IH + SQ
Sbjct: 239 MIGEGNWQQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQ 281
>gi|89027961|gb|ABD59346.1| PL10 [Crepidula fornicata]
Length = 286
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 90/172 (52%), Gaps = 7/172 (4%)
Query: 10 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
DL K C +L++TP RL + R KI + YLVLDEAD++ ++G I +V+ +
Sbjct: 62 DLDK-GCHLLVATPGRLVDMMERGKIGMDHCNYLVLDEADRMLDMG-FEPQIRRIVEKDT 119
Query: 70 NPSIVRS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 126
P + +FSAT P ++ LAR + + + + VGR + SE+I QK+V+ E +
Sbjct: 120 MPPTGQRQTLMFSATFPKEIQLLARDFLDNYIFLAVGRVGSTSENITQKVVWVEEPEKRS 179
Query: 127 LALRQSFAESLNPP--VLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L A P L+FV++K A L L +++ A IH D SQ +
Sbjct: 180 FLLDLLMASGTGPESLTLVFVETKKGADSLEQFLMYENYPATSIHGDRSQRE 231
>gi|238788773|ref|ZP_04632564.1| ATP-dependent RNA helicase rhlE [Yersinia frederiksenii ATCC 33641]
gi|238723078|gb|EEQ14727.1| ATP-dependent RNA helicase rhlE [Yersinia frederiksenii ATCC 33641]
Length = 451
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 89/163 (54%), Gaps = 5/163 (3%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + +DLS++E LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 73 IVRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
++ LFSAT D ++ LA ++H+ V V R+NTASE I Q + F + L L Q
Sbjct: 180 KRQNLLFSATFSDEIKGLASKLLHNPASVEVARRNTASEQIAQSVHFVDKNRKREL-LSQ 238
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
E VL+F ++K A L +L D I A IH + SQ
Sbjct: 239 MIGEGNWQQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQ 281
>gi|440229962|ref|YP_007343755.1| DNA/RNA helicase, superfamily II [Serratia marcescens FGI94]
gi|440051667|gb|AGB81570.1| DNA/RNA helicase, superfamily II [Serratia marcescens FGI94]
Length = 455
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 89/163 (54%), Gaps = 5/163 (3%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DILI+TP RL + +DLS VE LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDILIATPGRLLDLEHQNAVDLSNVEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 73 IVRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
++ LFSAT D ++ LA ++H+ V V R+NTASE + Q + F + + L L Q
Sbjct: 180 KRQNLLFSATFSDDIKALAGKLLHNPASVEVARRNTASEQVTQHVHFVDKKRKREL-LSQ 238
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
E VL+F ++K A L +L D I A IH + SQ
Sbjct: 239 MIGEGDWRQVLVFTRTKHGANHLAEQLNKDGITAAAIHGNKSQ 281
>gi|51595558|ref|YP_069749.1| ATP-dependent RNA helicase RhlE [Yersinia pseudotuberculosis IP
32953]
gi|108807091|ref|YP_651007.1| ATP-dependent RNA helicase RhlE [Yersinia pestis Antiqua]
gi|108812974|ref|YP_648741.1| ATP-dependent RNA helicase RhlE [Yersinia pestis Nepal516]
gi|153950333|ref|YP_001401773.1| ATP-dependent RNA helicase RhlE [Yersinia pseudotuberculosis IP
31758]
gi|166211637|ref|ZP_02237672.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Yersinia pestis
biovar Antiqua str. B42003004]
gi|167400295|ref|ZP_02305808.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Yersinia pestis
biovar Antiqua str. UG05-0454]
gi|167423922|ref|ZP_02315675.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Yersinia pestis
biovar Mediaevalis str. K1973002]
gi|170025120|ref|YP_001721625.1| ATP-dependent RNA helicase RhlE [Yersinia pseudotuberculosis YPIII]
gi|186894614|ref|YP_001871726.1| ATP-dependent RNA helicase RhlE [Yersinia pseudotuberculosis PB1/+]
gi|229894068|ref|ZP_04509254.1| putative ATP-dependent RNA helicase [Yersinia pestis Pestoides A]
gi|229903411|ref|ZP_04518524.1| putative ATP-dependent RNA helicase [Yersinia pestis Nepal516]
gi|294503186|ref|YP_003567248.1| DEAD/DEAH box helicase [Yersinia pestis Z176003]
gi|384121627|ref|YP_005504247.1| DEAD/DEAH box helicase [Yersinia pestis D106004]
gi|51588840|emb|CAH20454.1| putative ATP-dependent RNA helicase rhlE [Yersinia
pseudotuberculosis IP 32953]
gi|108776622|gb|ABG19141.1| DEAD/DEAH box helicase [Yersinia pestis Nepal516]
gi|108779004|gb|ABG13062.1| DEAD/DEAH box helicase [Yersinia pestis Antiqua]
gi|152961828|gb|ABS49289.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Yersinia
pseudotuberculosis IP 31758]
gi|166207408|gb|EDR51888.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Yersinia pestis
biovar Antiqua str. B42003004]
gi|167050244|gb|EDR61652.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Yersinia pestis
biovar Antiqua str. UG05-0454]
gi|167056771|gb|EDR66534.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Yersinia pestis
biovar Mediaevalis str. K1973002]
gi|169751654|gb|ACA69172.1| DEAD/DEAH box helicase domain protein [Yersinia pseudotuberculosis
YPIII]
gi|186697640|gb|ACC88269.1| DEAD/DEAH box helicase domain protein [Yersinia pseudotuberculosis
PB1/+]
gi|229679181|gb|EEO75284.1| putative ATP-dependent RNA helicase [Yersinia pestis Nepal516]
gi|229703953|gb|EEO90966.1| putative ATP-dependent RNA helicase [Yersinia pestis Pestoides A]
gi|262361223|gb|ACY57944.1| DEAD/DEAH box helicase [Yersinia pestis D106004]
gi|294353645|gb|ADE63986.1| DEAD/DEAH box helicase [Yersinia pestis Z176003]
Length = 451
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 89/163 (54%), Gaps = 5/163 (3%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + +DLS++E LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 73 IVRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
++ LFSAT D ++ LA ++H+ V V R+NTASE I Q + F + L L Q
Sbjct: 180 KRQNLLFSATFSDEIKGLASKLLHNPASVEVARRNTASEQIAQSVHFVDKNRKREL-LSQ 238
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
E VL+F ++K A L +L D I A IH + SQ
Sbjct: 239 MIGEGNWQQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQ 281
>gi|218192669|gb|EEC75096.1| hypothetical protein OsI_11255 [Oryza sativa Indica Group]
Length = 1023
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 89/167 (53%), Gaps = 9/167 (5%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-- 70
K C+I+I+TP RL ++ K + + R YLVLDEAD++F++G +P +++
Sbjct: 352 KAGCEIVIATPGRLIDLLKMKALKMFRATYLVLDEADRMFDLG-----FEPQIRSIVGQI 406
Query: 71 -PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 129
P LFSAT+P VE LAR I+ D +RV VG+ +A+E IKQ + S+ K+ L
Sbjct: 407 RPDRQTLLFSATMPYKVERLAREILTDPIRVTVGQVGSANEDIKQVVNVLLSDAEKMPWL 466
Query: 130 RQSFAESL-NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
+ + + VL+F K R E+ +L R +H D Q
Sbjct: 467 LEKLPGMIDDGDVLVFAAKKARVDEIESQLNQRGFRIAALHGDKDQA 513
>gi|3986287|dbj|BAA34994.1| DjVLGB [Dugesia japonica]
Length = 781
Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 55/168 (32%), Positives = 92/168 (54%), Gaps = 6/168 (3%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ C +L++TP RL I + KI L +Y+VLDEAD++ ++G I +++ + PS
Sbjct: 309 QMGCHLLVATPGRLVDFIEKNKISLEFCKYIVLDEADRMLDMG-FEPQIRKIIEESNMPS 367
Query: 73 IVRS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 129
+ +FSAT P +++LA +++ + + VGR + S+SIKQ++++ E KL L
Sbjct: 368 GINRQTLMFSATFPKEIQKLAADFLYNYIFMTVGRVGSTSDSIKQEIIYMTDVE-KLNYL 426
Query: 130 RQSFAESL-NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ F + N +LIFV++K A L L IH D SQ +
Sbjct: 427 KNIFNTTAPNTLILIFVETKKGADSLARFLLSKGYPVSSIHGDRSQVE 474
>gi|45440809|ref|NP_992348.1| ATP-dependent RNA helicase RhlE [Yersinia pestis biovar Microtus
str. 91001]
gi|45435667|gb|AAS61225.1| Superfamily II DNA and RNA helicases [Yersinia pestis biovar
Microtus str. 91001]
Length = 470
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 89/163 (54%), Gaps = 5/163 (3%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + +DLS++E LVLDEAD++ ++G + I V+ P+
Sbjct: 142 RGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 198
Query: 73 IVRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
++ LFSAT D ++ LA ++H+ V V R+NTASE I Q + F + L L Q
Sbjct: 199 KRQNLLFSATFSDEIKGLASKLLHNPASVEVARRNTASEQIAQSVHFVDKNRKREL-LSQ 257
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
E VL+F ++K A L +L D I A IH + SQ
Sbjct: 258 MIGEGNWQQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQ 300
>gi|326934003|ref|XP_003213086.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Meleagris
gallopavo]
Length = 944
Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 54/161 (33%), Positives = 88/161 (54%), Gaps = 3/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
+I++ TP RL +++K +L RV YLV DEAD++F++G ++ + + P
Sbjct: 378 EIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 435
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L + E
Sbjct: 436 LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEIFPSGPSKWNWLTRRLVEF 495
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + VL+FV K A+EL L +D G++H D+ Q++
Sbjct: 496 TSSGSVLLFVTKKANAEELANNLKQEDHNLGLLHGDMDQSE 536
>gi|344939864|ref|ZP_08779152.1| DEAD/DEAH box helicase domain protein [Methylobacter tundripaludum
SV96]
gi|344261056|gb|EGW21327.1| DEAD/DEAH box helicase domain protein [Methylobacter tundripaludum
SV96]
Length = 441
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 94/163 (57%), Gaps = 9/163 (5%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN--PS 72
CDI+++TP RL ++++ I+LS VE LVLDEAD++ ++G L P +K P
Sbjct: 125 GCDIVVATPGRLIDHVQQRNINLSNVEVLVLDEADRMLDMGFL-----PDIKQLMALIPK 179
Query: 73 IVRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
+S LFSAT+P+ ++ LA ++++ V V V ++N +E++ +++ G E + L L
Sbjct: 180 KRQSLLFSATVPNAIKSLAAQLLNNPVEVEVAKQNATAENVAERVYGIGREYKREL-LSY 238
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ VL+FV++K A L +L D IR +H D +Q
Sbjct: 239 LIGSNNWKQVLVFVRTKHGADRLEKQLIEDGIRTAALHGDKTQ 281
>gi|70663482|emb|CAJ15140.1| PL10a protein [Platynereis dumerilii]
Length = 771
Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 56/170 (32%), Positives = 91/170 (53%), Gaps = 4/170 (2%)
Query: 10 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
DL + C +L++TP RL + R KI L + ++VLDEAD++ ++G I +V+ +
Sbjct: 418 DLPERGCHLLVATPGRLVDMLERGKIGLDHIRFVVLDEADRMLDMG-FEPQIRRIVEKDT 476
Query: 70 NPSI--VRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 126
P R+L FSAT P ++ LAR +H+ + + VGR + SE+I QK+V+ + +
Sbjct: 477 MPPTGDRRTLMFSATFPKEIQILARDFLHNYIFLAVGRVGSTSENITQKVVWVEEPDKRS 536
Query: 127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L A + L+FV++K A L L + + IH D SQ +
Sbjct: 537 FLLDLLNASGPDSLTLVFVETKKGADALDNFLYNEGYPSACIHGDRSQKE 586
>gi|70663484|emb|CAJ15141.1| PL10b protein [Platynereis dumerilii]
Length = 816
Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 56/170 (32%), Positives = 91/170 (53%), Gaps = 4/170 (2%)
Query: 10 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
DL + C +L++TP RL + R KI L + ++VLDEAD++ ++G I +V+ +
Sbjct: 463 DLPERGCHLLVATPGRLVDMLERGKIGLDHIRFVVLDEADRMLDMG-FEPQIRRIVEKDT 521
Query: 70 NPSI--VRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 126
P R+L FSAT P ++ LAR +H+ + + VGR + SE+I QK+V+ + +
Sbjct: 522 MPPTGDRRTLMFSATFPKEIQILARDFLHNYIFLAVGRVGSTSENITQKVVWVEEPDKRS 581
Query: 127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L A + L+FV++K A L L + + IH D SQ +
Sbjct: 582 FLLDLLNASGPDSLTLVFVETKKGADALDNFLYNEGYPSACIHGDRSQKE 631
>gi|108806879|ref|YP_650795.1| helicase, partial [Yersinia pestis Antiqua]
gi|108812966|ref|YP_648733.1| helicase, partial [Yersinia pestis Nepal516]
gi|170025113|ref|YP_001721618.1| helicase domain-containing protein, partial [Yersinia
pseudotuberculosis YPIII]
gi|229894166|ref|ZP_04509352.1| putative ATP-dependent RNA helicase [Yersinia pestis Pestoides A]
gi|229903400|ref|ZP_04518513.1| putative ATP-dependent RNA helicase [Yersinia pestis Nepal516]
gi|384415489|ref|YP_005624851.1| putative ATP-dependent RNA helicase, partial [Yersinia pestis
biovar Medievalis str. Harbin 35]
gi|108776614|gb|ABG19133.1| Helicase [Yersinia pestis Nepal516]
gi|108778792|gb|ABG12850.1| helicase [Yersinia pestis Antiqua]
gi|169751647|gb|ACA69165.1| helicase domain protein [Yersinia pseudotuberculosis YPIII]
gi|229679170|gb|EEO75273.1| putative ATP-dependent RNA helicase [Yersinia pestis Nepal516]
gi|229704051|gb|EEO91064.1| putative ATP-dependent RNA helicase [Yersinia pestis Pestoides A]
gi|320015993|gb|ADV99564.1| putative ATP-dependent RNA helicase [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 334
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 89/163 (54%), Gaps = 5/163 (3%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + +DLS++E LVLDEAD++ ++G + I V+ P+
Sbjct: 6 RGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 62
Query: 73 IVRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
++ LFSAT D ++ LA ++H+ V V R+NTASE I Q + F + L L Q
Sbjct: 63 KRQNLLFSATFSDEIKGLASKLLHNPASVEVARRNTASEQIAQSVHFVDKNRKREL-LSQ 121
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
E VL+F ++K A L +L D I A IH + SQ
Sbjct: 122 MIGEGNWQQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQ 164
>gi|253743371|gb|EES99785.1| ATP-dependent RNA helicase [Giardia intestinalis ATCC 50581]
Length = 553
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 93/187 (49%), Gaps = 13/187 (6%)
Query: 2 KKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHI 61
+KE V + LS D+L++TPL L + + ++ +VLDE D L ++ I
Sbjct: 199 RKETVTQSLLSSKKHDVLVATPLVLLNFLTEGLVRFPNLQTIVLDEVDCLMN-PQFIEQI 257
Query: 62 DPVVKA-----------CSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASE 110
D V++ C V +LFSA++ D V L + + D V++ + +
Sbjct: 258 DAVLEWILKTNTNTGNYCPTTRPVFTLFSASVTDQVFGLVNTFLVDPVQISIAGAGMPTN 317
Query: 111 SIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGEL-AFDDIRAGVIH 169
++KQ +FAG + K+ L+Q+ E PPVL+F + DR +Y EL + D G +H
Sbjct: 318 TVKQYFMFAGRDRYKMFTLQQAIMEHGKPPVLVFASTSDRVFTIYRELICYVDWPTGYLH 377
Query: 170 SDLSQTQ 176
+ L++ Q
Sbjct: 378 AGLTKNQ 384
>gi|238759754|ref|ZP_04620912.1| ATP-dependent RNA helicase rhlE [Yersinia aldovae ATCC 35236]
gi|238701986|gb|EEP94545.1| ATP-dependent RNA helicase rhlE [Yersinia aldovae ATCC 35236]
Length = 452
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 89/163 (54%), Gaps = 5/163 (3%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + +DLS++E LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 73 IVRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
++ LFSAT D ++ LA ++H+ V V R+NTASE I Q + F + L L Q
Sbjct: 180 KRQNLLFSATFSDEIKGLASKLLHNPASVEVARRNTASEQITQSVHFVDKNRKREL-LSQ 238
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
E VL+F ++K A L +L D I A IH + SQ
Sbjct: 239 MIGEGNWQQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQ 281
>gi|242808610|ref|XP_002485202.1| ATP dependent RNA helicase (Dbp1), putative [Talaromyces stipitatus
ATCC 10500]
gi|218715827|gb|EED15249.1| ATP dependent RNA helicase (Dbp1), putative [Talaromyces stipitatus
ATCC 10500]
Length = 680
Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 54/164 (32%), Positives = 85/164 (51%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 327 CDLLVATPGRLVDLIERGRISLVNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPQVND 385
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + D V + VGR + SE+I Q++ + + + + L
Sbjct: 386 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQRIEYVEDHDKRSVLLDIL 445
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
LIFV++K A L L + A IH D +Q +
Sbjct: 446 HTHGTTGLTLIFVETKRMADSLCDFLINQNFPATAIHGDRTQRE 489
>gi|123443103|ref|YP_001007077.1| ATP-dependent RNA helicase RhlE [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|420257770|ref|ZP_14760522.1| ATP-dependent RNA helicase RhlE [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|122090064|emb|CAL12927.1| putative ATP-dependent RNA helicase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|404514847|gb|EKA28630.1| ATP-dependent RNA helicase RhlE [Yersinia enterocolitica subsp.
enterocolitica WA-314]
Length = 451
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 89/163 (54%), Gaps = 5/163 (3%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + +DLS++E LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 73 IVRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
++ LFSAT D ++ LA ++H+ V V R+NTASE I Q + F + L L Q
Sbjct: 180 KRQNLLFSATFSDEIKGLASKLLHNPASVEVARRNTASEQIAQSVHFVDKNRKREL-LSQ 238
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
E VL+F ++K A L +L D I A IH + SQ
Sbjct: 239 MIGEGNWQQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQ 281
>gi|332161012|ref|YP_004297589.1| ATP-dependent RNA helicase RhlE [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|386309242|ref|YP_006005298.1| ATP-dependent RNA helicase RhlE [Yersinia enterocolitica subsp.
palearctica Y11]
gi|418240812|ref|ZP_12867348.1| ATP-dependent RNA helicase RhlE [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|433550318|ref|ZP_20506362.1| ATP-dependent RNA helicase RhlE [Yersinia enterocolitica IP 10393]
gi|318604884|emb|CBY26382.1| ATP-dependent RNA helicase RhlE [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325665242|gb|ADZ41886.1| ATP-dependent RNA helicase RhlE [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|351779815|gb|EHB21912.1| ATP-dependent RNA helicase RhlE [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|431789453|emb|CCO69402.1| ATP-dependent RNA helicase RhlE [Yersinia enterocolitica IP 10393]
Length = 451
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 89/163 (54%), Gaps = 5/163 (3%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + +DLS++E LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 73 IVRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
++ LFSAT D ++ LA ++H+ V V R+NTASE I Q + F + L L Q
Sbjct: 180 KRQNLLFSATFSDEIKGLASKLLHNPASVEVARRNTASEQIAQSVHFVDKNRKREL-LSQ 238
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
E VL+F ++K A L +L D I A IH + SQ
Sbjct: 239 MIGEGNWQQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQ 281
>gi|361127843|gb|EHK99800.1| putative ATP-dependent RNA helicase ded1 [Glarea lozoyensis 74030]
Length = 1088
Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 58/166 (34%), Positives = 90/166 (54%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI-V 74
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P + +
Sbjct: 307 CDLLVATPGRLVDLIERGRISLQNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPGVQL 365
Query: 75 RS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFA--GSEEGKLLALR 130
R +FSAT P ++ LAR + D + + VGR + SE+I QK+ + G + LL +
Sbjct: 366 RQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGSTSENITQKVEYVEDGDKRSVLLDIL 425
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L LIFV++K A L L + A IH D +Q +
Sbjct: 426 HTHGAGL---TLIFVETKRMADLLCDFLIGQNFPATSIHGDRNQRE 468
>gi|332306838|ref|YP_004434689.1| DEAD/DEAH box helicase domain protein [Glaciecola sp. 4H-3-7+YE-5]
gi|410648227|ref|ZP_11358641.1| ATP-dependent RNA helicase rhlB [Glaciecola agarilytica NO2]
gi|332174167|gb|AEE23421.1| DEAD/DEAH box helicase domain protein [Glaciecola sp. 4H-3-7+YE-5]
gi|410132246|dbj|GAC07040.1| ATP-dependent RNA helicase rhlB [Glaciecola agarilytica NO2]
Length = 428
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 92/164 (56%), Gaps = 7/164 (4%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
K DI+ISTP RL + K I+L+ VE++VLDEAD++ ++G I V + +
Sbjct: 122 KAGVDIVISTPGRLLEHMTLKNIELANVEFVVLDEADRMLDMG----FISDVRQMLAQIR 177
Query: 73 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
VR LFSAT+ V ELA ++ + + + N+A++++ Q +++ SEE K+ +
Sbjct: 178 AVRQTLLFSATISPTVNELAHKLLKNHEEIRATQLNSAADTV-QHVMYPVSEEDKIRLFK 236
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
AE VL+F +K++A +L L I AGV H+D SQ
Sbjct: 237 TLLAEQNWYQVLVFTSTKEQADKLMAALKNSKINAGVCHADKSQ 280
>gi|384249989|gb|EIE23469.1| DEAD-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 573
Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 55/164 (33%), Positives = 88/164 (53%), Gaps = 6/164 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CDIL++TP RL I R ++ LSRV YL LDEAD++ ++G I +V+ P +
Sbjct: 221 CDILVATPGRLSDLIERARVSLSRVTYLALDEADRMLDMG-FEPQIRRIVEQEDMPRTGQ 279
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
LFSAT P ++ LA +H+ + + VGR +++E I Q + + + + + L
Sbjct: 280 RQTLLFSATFPKEIQRLAADFLHNYIFLAVGRVGSSTELIVQHIEYVSPGDKRQVLL--D 337
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
++ L+FV++K A L LA ++ A IH D SQ +
Sbjct: 338 LINTVEGLTLVFVETKRGADALEDFLAGNNFPATSIHGDRSQQE 381
>gi|238763827|ref|ZP_04624785.1| ATP-dependent RNA helicase rhlE [Yersinia kristensenii ATCC 33638]
gi|238697957|gb|EEP90716.1| ATP-dependent RNA helicase rhlE [Yersinia kristensenii ATCC 33638]
Length = 452
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 89/163 (54%), Gaps = 5/163 (3%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + +DLS++E LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 73 IVRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
++ LFSAT D ++ LA ++H+ V V R+NTASE I Q + F + L L Q
Sbjct: 180 KRQNLLFSATFSDEIKGLASKLLHNPASVEVARRNTASEQIAQSVHFVDKNRKREL-LSQ 238
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
E VL+F ++K A L +L D I A IH + SQ
Sbjct: 239 MIGEGNWQQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQ 281
>gi|224086197|ref|XP_002193200.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Taeniopygia guttata]
Length = 923
Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 54/161 (33%), Positives = 88/161 (54%), Gaps = 3/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
+I++ TP RL +++K +L RV YLV DEAD++F++G ++ + + P
Sbjct: 378 EIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 435
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L + E
Sbjct: 436 LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEIFPSGPSKWNWLTRRLVEF 495
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + VL+FV K A+EL L +D G++H D+ Q++
Sbjct: 496 TSSGSVLLFVTKKANAEELANNLKQEDHNLGLLHGDMDQSE 536
>gi|359433282|ref|ZP_09223619.1| ATP-dependent RNA helicase rhlE [Pseudoalteromonas sp. BSi20652]
gi|357920080|dbj|GAA59868.1| ATP-dependent RNA helicase rhlE [Pseudoalteromonas sp. BSi20652]
Length = 434
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 91/162 (56%), Gaps = 3/162 (1%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
K DI+++TP RL IR + L+ V++LVLDEAD++ ++G ++ + V+K+C+
Sbjct: 121 KEGVDIVVATPGRLFDHIRLGNLSLASVKHLVLDEADRMLDMG-FIEDMQNVIKSCAEER 179
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ LFSAT P +++ A ++ A V V + N+ + +++ +V+ E K L +
Sbjct: 180 QI-LLFSATFPAAIKQFASKVLKQAEIVRVDQTNSTASTVEH-VVYPVEERRKQELLSEL 237
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ VL+FV K+ A EL EL D I AGV H D SQ
Sbjct: 238 IGKKNWQQVLVFVNMKETADELVKELNLDGIPAGVCHGDKSQ 279
>gi|359454797|ref|ZP_09244066.1| ATP-dependent RNA helicase rhlE [Pseudoalteromonas sp. BSi20495]
gi|358048174|dbj|GAA80315.1| ATP-dependent RNA helicase rhlE [Pseudoalteromonas sp. BSi20495]
Length = 434
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 91/162 (56%), Gaps = 3/162 (1%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
K DI+++TP RL IR + L+ V++LVLDEAD++ ++G ++ + V+K+C+
Sbjct: 121 KEGVDIVVATPGRLFDHIRLGNLSLASVKHLVLDEADRMLDMG-FIEDMQNVIKSCAEER 179
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ LFSAT P +++ A ++ A V V + N+ + +++ +V+ E K L +
Sbjct: 180 QI-LLFSATFPAAIKQFASKVLKQAEIVRVDQTNSTASTVEH-VVYPVEERRKQELLSEL 237
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ VL+FV K+ A EL EL D I AGV H D SQ
Sbjct: 238 IGKKNWQQVLVFVNMKETADELVKELNLDGIPAGVCHGDKSQ 279
>gi|281212472|gb|EFA86632.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 728
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 88/170 (51%), Gaps = 13/170 (7%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-- 70
K C+IL++TP RL I+ K ++RV YLVLDEAD++F++G P V++
Sbjct: 374 KAGCEILVTTPGRLIDMIKLKATKMNRVTYLVLDEADRMFDMG-----FGPQVQSIVGQI 428
Query: 71 -PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 129
P LFSAT P +EELAR+I+ D +R+ +G +A++ I Q ++ S K L
Sbjct: 429 RPDRQTLLFSATFPPNIEELARNILIDPIRISIGNTGSANQDITQNVIVLSSNGEKWNWL 488
Query: 130 RQ---SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
Q S N V+IFV +K EL L + +H D Q +
Sbjct: 489 IQRLPSLVSQGN--VIIFVSTKVAVDELSMNLVKFGFPSEGLHGDKDQQE 536
>gi|239611619|gb|EEQ88606.1| ATP-dependent RNA helicase ded1 [Ajellomyces dermatitidis ER-3]
gi|327348365|gb|EGE77222.1| ATP-dependent RNA helicase DED1 [Ajellomyces dermatitidis ATCC
18188]
Length = 692
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 54/164 (32%), Positives = 90/164 (54%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI-V 74
C++L++TP RL + R +I L+ ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 333 CNVLVATPGRLVDMMERGRISLAHIQYLVLDEADRMLDMG-FEPQIRRIVQGSDMPDKHM 391
Query: 75 RS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
R +FSAT P +++LA + D + + VGR + SE+I Q++V S++ K AL
Sbjct: 392 RQTLMFSATFPPDIQKLAEEFLKDHIFLSVGRVGSTSENITQRVVECESDKDKDSALLDI 451
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L+FV++K +A L L + A IH D +Q +
Sbjct: 452 LCTDSTGLTLVFVETKRQADMLSDFLLDHRLPATAIHGDRTQRE 495
>gi|261204854|ref|XP_002627164.1| ATP-dependent RNA helicase ded1 [Ajellomyces dermatitidis SLH14081]
gi|239592223|gb|EEQ74804.1| ATP-dependent RNA helicase ded1 [Ajellomyces dermatitidis SLH14081]
Length = 692
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 54/164 (32%), Positives = 90/164 (54%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI-V 74
C++L++TP RL + R +I L+ ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 333 CNVLVATPGRLVDMMERGRISLAHIQYLVLDEADRMLDMG-FEPQIRRIVQGSDMPDKHM 391
Query: 75 RS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
R +FSAT P +++LA + D + + VGR + SE+I Q++V S++ K AL
Sbjct: 392 RQTLMFSATFPPDIQKLAEEFLKDHIFLSVGRVGSTSENITQRVVECESDKDKDSALLDI 451
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L+FV++K +A L L + A IH D +Q +
Sbjct: 452 LCTDSTGLTLVFVETKRQADMLSDFLLDHRLPATAIHGDRTQRE 495
>gi|332532553|ref|ZP_08408430.1| ATP-dependent RNA helicase [Pseudoalteromonas haloplanktis ANT/505]
gi|359440332|ref|ZP_09230253.1| ATP-dependent RNA helicase rhlE [Pseudoalteromonas sp. BSi20429]
gi|392533028|ref|ZP_10280165.1| ATP-dependent RNA helicase [Pseudoalteromonas arctica A 37-1-2]
gi|332037974|gb|EGI74422.1| ATP-dependent RNA helicase [Pseudoalteromonas haloplanktis ANT/505]
gi|358037869|dbj|GAA66502.1| ATP-dependent RNA helicase rhlE [Pseudoalteromonas sp. BSi20429]
Length = 434
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 91/162 (56%), Gaps = 3/162 (1%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
K DI+++TP RL IR + L+ V++LVLDEAD++ ++G ++ + V+K+C+
Sbjct: 121 KEGVDIVVATPGRLFDHIRLGNLSLASVKHLVLDEADRMLDMG-FIEDMQNVIKSCAEER 179
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ LFSAT P +++ A ++ A V V + N+ + +++ +V+ E K L +
Sbjct: 180 QIL-LFSATFPAAIKQFASKVLKQAEIVRVDQTNSTASTVEH-VVYPVEERRKQELLSEL 237
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ VL+FV K+ A EL EL D I AGV H D SQ
Sbjct: 238 IGKKNWQQVLVFVNMKETADELVKELNLDGIPAGVCHGDKSQ 279
>gi|414070080|ref|ZP_11406069.1| ATP-dependent RNA helicase [Pseudoalteromonas sp. Bsw20308]
gi|410807592|gb|EKS13569.1| ATP-dependent RNA helicase [Pseudoalteromonas sp. Bsw20308]
Length = 434
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 91/162 (56%), Gaps = 3/162 (1%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
K DI+++TP RL IR + L+ V++LVLDEAD++ ++G ++ + V+K+C+
Sbjct: 121 KEGVDIVVATPGRLFDHIRLGNLSLASVKHLVLDEADRMLDMG-FIEDMQNVIKSCAEER 179
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ LFSAT P +++ A ++ A V V + N+ + +++ +V+ E K L +
Sbjct: 180 QIL-LFSATFPAAIKQFASKVLKQAEIVRVDQTNSTASTVEH-VVYPVEERRKQELLSEL 237
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ VL+FV K+ A EL EL D I AGV H D SQ
Sbjct: 238 IGKKNWQQVLVFVNMKETADELVKELNLDGIPAGVCHGDKSQ 279
>gi|242041163|ref|XP_002467976.1| hypothetical protein SORBIDRAFT_01g037410 [Sorghum bicolor]
gi|241921830|gb|EER94974.1| hypothetical protein SORBIDRAFT_01g037410 [Sorghum bicolor]
Length = 766
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 88/167 (52%), Gaps = 9/167 (5%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-- 70
K C+++I+TP RL ++ K + + R YLVLDEAD++F++G +P +++
Sbjct: 340 KAGCEVVIATPGRLIDLLKMKALKMFRATYLVLDEADRMFDLG-----FEPQIRSIVGQI 394
Query: 71 -PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 129
P LFSAT+P VE LAR I+ D +RV VG+ A+E IKQ + S+ K+ L
Sbjct: 395 RPDRQTLLFSATMPYKVERLAREILTDPIRVTVGQVGGANEDIKQVVNVLPSDVEKMPWL 454
Query: 130 RQSFAESL-NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
+ + + VL+F K R E+ EL R +H D Q
Sbjct: 455 LEKLPGMIDDGDVLVFASKKARVDEIEKELNQRGFRIAALHGDKDQA 501
>gi|410640695|ref|ZP_11351225.1| ATP-dependent RNA helicase rhlB [Glaciecola chathamensis S18K6]
gi|410139723|dbj|GAC09412.1| ATP-dependent RNA helicase rhlB [Glaciecola chathamensis S18K6]
Length = 428
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 92/164 (56%), Gaps = 7/164 (4%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
K DI+ISTP RL + K I+L+ VE++VLDEAD++ ++G I V + +
Sbjct: 122 KAGVDIVISTPGRLLEHMTLKNIELANVEFVVLDEADRMLDMG----FISDVRQMLAQIR 177
Query: 73 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
VR LFSAT+ V ELA ++ + + + N+A++++ Q +++ SEE K+ +
Sbjct: 178 AVRQTLLFSATISPTVNELAHKLLKNHEEIRATQLNSAADTV-QHVMYPVSEEDKIRLFK 236
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
AE VL+F +K++A +L L I AGV H+D SQ
Sbjct: 237 TLLAEQNWYQVLVFTSTKEQADKLMAALKNSKINAGVCHADKSQ 280
>gi|336266888|ref|XP_003348211.1| hypothetical protein SMAC_04056 [Sordaria macrospora k-hell]
Length = 648
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P + +
Sbjct: 355 CDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPKVDQ 413
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + D + + VGR + SE+I QK+ + + + LL +
Sbjct: 414 RQTLMFSATFPRDIQILARDFLKDYIFLSVGRVGSTSENITQKVEYVEDVDKRSVLLDIL 473
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ A L LIFV++K A L L + A IH D +Q +
Sbjct: 474 HTHAGGL---TLIFVETKRMADSLSDFLINQNFPATSIHGDRTQRE 516
>gi|392566634|gb|EIW59810.1| DEAD-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 640
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 58/166 (34%), Positives = 91/166 (54%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L +TP RL I R +I L+ V YLVLDEAD++ ++G I +V+ P +
Sbjct: 306 CDLLSATPGRLVDLIERGRISLANVRYLVLDEADRMLDMG-FEPQIRRIVQGEDMPGVQE 364
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR M D V + VGR + SE+I Q++ + + + LL +
Sbjct: 365 RQTLMFSATFPRDIQMLARDFMKDYVFLSVGRVGSTSENITQRVEYVEDADKRSVLLDVL 424
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
Q+ + L L+FV++K A L L +++ A IH D +Q +
Sbjct: 425 QANSTGL---TLVFVETKRMADMLSDFLLGNNMPATSIHGDRTQRE 467
>gi|326524209|dbj|BAJ97115.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 764
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 9/166 (5%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-- 70
K C+I+++TP RL ++ K + + R YLVLDEAD++F++G +P +++
Sbjct: 335 KSGCEIVVATPGRLIDLLKMKALRMFRATYLVLDEADRMFDLG-----FEPQIRSIVGQI 389
Query: 71 -PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 129
P LFSAT+P VE LAR I+ D +RV VG+ +A+E IKQ + S+ K+ L
Sbjct: 390 RPDRQTLLFSATMPYKVERLAREILTDPIRVTVGQVGSANEDIKQVVNVLPSDAEKMPWL 449
Query: 130 RQSFAESL-NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ + + VL+F K R E+ +L + +H D Q
Sbjct: 450 LEKMPGMIDDGDVLVFATKKARVDEVENQLNQHGFKVAALHGDKDQ 495
>gi|372221768|ref|ZP_09500189.1| DEAD/DEAH box helicase [Mesoflavibacter zeaxanthinifaciens S86]
Length = 588
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 94/168 (55%), Gaps = 11/168 (6%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
K I+++TP R++ I R +D+++++Y VLDEAD++ +G + + SN
Sbjct: 120 KRGAQIVVATPGRMKDMIGRGMVDITKIDYCVLDEADEMLNMG----FYEDIKDILSNTP 175
Query: 73 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
+S LFSAT+P V +A+ MH + VG KN+ + +++ + G + + AL+
Sbjct: 176 KEKSTWLFSATMPKEVATIAKKFMHQPKEITVGSKNSGANTVQHEYYVVGGRD-RYAALK 234
Query: 131 QSFAESLNPPV--LIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ A++ NP + +IF ++K +++ +L D AG +H DLSQ Q
Sbjct: 235 R-LADA-NPGIFSVIFCRTKRDTQKIAEKLIEDGYNAGALHGDLSQNQ 280
>gi|414866472|tpg|DAA45029.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 766
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-- 70
K C+I+I+TP RL ++ K + + R YLVLDEAD++F++G +P +++
Sbjct: 340 KAGCEIVIATPGRLIDLLKMKALKMFRATYLVLDEADRMFDLG-----FEPQIRSIVGQI 394
Query: 71 -PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 129
P LFSAT+P VE LAR I+ D +RV VG+ A+E IKQ + S+ K+ L
Sbjct: 395 RPDRQTLLFSATMPYKVERLAREILTDPIRVTVGQVGGANEDIKQVVNVLPSDVEKMPWL 454
Query: 130 RQSFAESL-NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ + VL+F K R E+ EL R +H D Q
Sbjct: 455 LGKLPGMIDDGDVLVFASKKARVDEIEKELNQRGFRIAALHGDKDQ 500
>gi|418300341|ref|ZP_12912167.1| dead-box ATP-dependent RNA helicase [Agrobacterium tumefaciens
CCNWGS0286]
gi|355533754|gb|EHH03074.1| dead-box ATP-dependent RNA helicase [Agrobacterium tumefaciens
CCNWGS0286]
Length = 490
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 91/164 (55%), Gaps = 6/164 (3%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKACSNPS 72
DIL++TP RL I R I LS+V YLVLDEAD++ ++G + L+ I +V A
Sbjct: 125 GTDILVATPGRLLDLIARNAISLSKVTYLVLDEADQMLDLGFIHDLRKISKMVPAKRQ-- 182
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
LFSAT+P + +L+ + + D V+V V A++ ++Q + F + K L++S
Sbjct: 183 --TLLFSATMPKAIADLSHNYLTDPVKVEVTPPGKAADKVEQYVHFVAGKNDKTDLLKKS 240
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E+ + ++F+++K A++LY L + IH + SQ Q
Sbjct: 241 LNENPDGRAIVFLRTKHGAEKLYKHLEHIGFKVASIHGNKSQGQ 284
>gi|164658197|ref|XP_001730224.1| hypothetical protein MGL_2606 [Malassezia globosa CBS 7966]
gi|159104119|gb|EDP43010.1| hypothetical protein MGL_2606 [Malassezia globosa CBS 7966]
Length = 653
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 55/164 (33%), Positives = 88/164 (53%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L +TP RL I R +I L+ V +LVLDEAD++ ++G I +V P ++
Sbjct: 316 CDMLSATPGRLVDLIERGRISLANVRFLVLDEADRMLDMG-FEPQIRRIVLGEDMPGVMD 374
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LA+ + + V + VGR + SE+I QK+ + + + + L
Sbjct: 375 RQTLMFSATFPQNIQMLAKDFLKEYVFLSVGRVGSTSENITQKIEYVEDRDKQSMLLDVL 434
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
A + LIFV++K A L L + +I A IH D +Q +
Sbjct: 435 AAMPTSGLTLIFVETKRMADMLSDFLIYSNIAATSIHGDRTQRE 478
>gi|358253999|dbj|GAA54032.1| probable ATP-dependent RNA helicase DDX52 [Clonorchis sinensis]
Length = 719
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 104/208 (50%), Gaps = 48/208 (23%)
Query: 15 SCDILISTPLR----LRLAIRRKKIDLSRVEYLVLDEADKLFEV---------GNLLKH- 60
S IL++TP R L L D+S + +LVLDE DK+ EV ++H
Sbjct: 324 STRILVATPSRMAFLLSLDPSLCPFDVSNLAWLVLDEYDKMLEVDVTNANSLSSKKMRHR 383
Query: 61 -------IDPVVKACS--------NPSIVRSLFSATLPDFVEELARSIM----------- 94
I+P+ A S P++ ++FSAT+PD V A+S +
Sbjct: 384 VRSFRDQINPIFHALSKARSISGRQPNV--AMFSATVPDEVVNWAQSELPALLSPTGEQT 441
Query: 95 ----HDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKDR 150
+ V++ VG +N+A ++KQ+L + +EEGKLL +R SL P LIF++S++R
Sbjct: 442 LSGKFELVQLCVGTRNSAVSTVKQELRYCATEEGKLLEMRYLLVRSLLYPCLIFMESRER 501
Query: 151 AKELYGELAFDD--IRAGVIHSDLSQTQ 176
AKEL E+ D + A VI SD + Q
Sbjct: 502 AKELIKEILLSDANVLANVISSDKTDAQ 529
>gi|326482079|gb|EGE06089.1| ATP-dependent RNA helicase DED1 [Trichophyton equinum CBS 127.97]
Length = 680
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 339 CDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPPVAG 397
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + D V + VGR + SE+I QK+ + + + LL +
Sbjct: 398 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVEDNDKRSVLLDIL 457
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L LIFV++K A L L A IH D +Q +
Sbjct: 458 HTHGAGL---TLIFVETKRMADSLSEFLINQHFPATAIHGDRTQRE 500
>gi|327304303|ref|XP_003236843.1| ATP-dependent RNA helicase DED1 [Trichophyton rubrum CBS 118892]
gi|326459841|gb|EGD85294.1| ATP-dependent RNA helicase DED1 [Trichophyton rubrum CBS 118892]
Length = 678
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 337 CDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPPVAG 395
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + D V + VGR + SE+I QK+ + + + LL +
Sbjct: 396 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVEDNDKRSVLLDIL 455
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L LIFV++K A L L A IH D +Q +
Sbjct: 456 HTHGAGL---TLIFVETKRMADSLSEFLINQHFPATAIHGDRTQRE 498
>gi|302662748|ref|XP_003023025.1| hypothetical protein TRV_02846 [Trichophyton verrucosum HKI 0517]
gi|291187001|gb|EFE42407.1| hypothetical protein TRV_02846 [Trichophyton verrucosum HKI 0517]
Length = 677
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 336 CDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPPVAG 394
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + D V + VGR + SE+I QK+ + + + LL +
Sbjct: 395 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVEDNDKRSVLLDIL 454
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L LIFV++K A L L A IH D +Q +
Sbjct: 455 HTHGAGL---TLIFVETKRMADSLSEFLINQHFPATAIHGDRTQRE 497
>gi|302501664|ref|XP_003012824.1| hypothetical protein ARB_01075 [Arthroderma benhamiae CBS 112371]
gi|291176384|gb|EFE32184.1| hypothetical protein ARB_01075 [Arthroderma benhamiae CBS 112371]
Length = 677
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 336 CDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPPVAG 394
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + D V + VGR + SE+I QK+ + + + LL +
Sbjct: 395 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVEDNDKRSVLLDIL 454
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L LIFV++K A L L A IH D +Q +
Sbjct: 455 HTHGAGL---TLIFVETKRMADSLSEFLINQHFPATAIHGDRTQRE 497
>gi|156053564|ref|XP_001592708.1| ATP-dependent RNA helicase DED1 [Sclerotinia sclerotiorum 1980]
gi|160380639|sp|A7EJY3.1|DED1_SCLS1 RecName: Full=ATP-dependent RNA helicase ded1
gi|154703410|gb|EDO03149.1| ATP-dependent RNA helicase DED1 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 678
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 88/166 (53%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 322 CDLLVATPGRLVDLIERGRISLQNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPGVQN 380
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + D V + VGR + SE+I QK+ + + + LL +
Sbjct: 381 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVEDIDKRSVLLDIL 440
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L LIFV++K A L L + A IH D +Q +
Sbjct: 441 HTHGAGL---TLIFVETKRMADSLSDFLINQNFPATSIHGDRTQRE 483
>gi|154299943|ref|XP_001550389.1| hypothetical protein BC1G_10862 [Botryotinia fuckeliana B05.10]
gi|160380638|sp|A6SEH9.1|DED1_BOTFB RecName: Full=ATP-dependent RNA helicase ded1
gi|347841547|emb|CCD56119.1| similar to ATP-dependent RNA helicase ded1 [Botryotinia fuckeliana]
Length = 683
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 88/166 (53%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 322 CDLLVATPGRLVDLIERGRISLQNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPGVQN 380
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + D V + VGR + SE+I QK+ + + + LL +
Sbjct: 381 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVEDIDKRSVLLDIL 440
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L LIFV++K A L L + A IH D +Q +
Sbjct: 441 HTHGAGL---TLIFVETKRMADSLSDFLINQNFPATSIHGDRTQRE 483
>gi|86133373|ref|ZP_01051955.1| DEAD/DEAH box helicase [Polaribacter sp. MED152]
gi|85820236|gb|EAQ41383.1| DEAD/DEAH box helicase [Polaribacter sp. MED152]
Length = 606
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 91/167 (54%), Gaps = 9/167 (5%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
K I++ TP R I R+ + L V +LVLDEAD++ +G + +D V++A P
Sbjct: 120 KKGSQIVVGTPGRTVDLINRRALKLGNVRWLVLDEADEMLNMG-FKEELDKVLEAT--PE 176
Query: 73 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
++L FSAT P VE +AR+ M V V G KN+ SE++ + +A +E + AL++
Sbjct: 177 TKQTLLFSATFPREVEAIARNYMTTPVEVTSGEKNSGSENVSHEY-YAVTERTRYPALKR 235
Query: 132 SFAESLNPPV--LIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
LNP + +IF +++ +E+ L D A +H DLSQ Q
Sbjct: 236 --IADLNPDIYAIIFCRTRRETQEVADNLIKDGYNADSLHGDLSQAQ 280
>gi|258566652|ref|XP_002584070.1| ATP-dependent RNA helicase ded1 [Uncinocarpus reesii 1704]
gi|237905516|gb|EEP79917.1| ATP-dependent RNA helicase ded1 [Uncinocarpus reesii 1704]
Length = 670
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 88/166 (53%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI-- 73
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 318 CDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPPVNG 376
Query: 74 -VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + D V + VGR + SE+I QK+ + + + LL +
Sbjct: 377 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVEDNDKRSVLLDIL 436
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L LIFV++K A L L + A IH D +Q +
Sbjct: 437 HTHGTGL---TLIFVETKRMADSLSEFLINQNFPATAIHGDRTQRE 479
>gi|71281612|ref|YP_268332.1| DEAD-box ATP dependent DNA helicase [Colwellia psychrerythraea 34H]
gi|71147352|gb|AAZ27825.1| ATP-dependent RNA helicase, DEAD box family [Colwellia
psychrerythraea 34H]
Length = 455
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 94/171 (54%), Gaps = 3/171 (1%)
Query: 4 ELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDP 63
++ T + K D+L++TP RL + + +DLS+V++LVLDEAD++ ++G L I+
Sbjct: 130 KMASQTKMLKQGLDVLVATPGRLLEHLALRNVDLSQVKFLVLDEADRMLDMG-FLTDIEK 188
Query: 64 VVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEE 123
++ A + +FSAT D V+ LA ++ + V ++NT S IKQ V+ +EE
Sbjct: 189 LLLAVKHKHQTL-MFSATFSDRVKSLANQLLKSPKTISVSKENTTSGKIKQ-AVYWVTEE 246
Query: 124 GKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
K L + + VL+F +K+ A L EL D I+A + H D +Q
Sbjct: 247 RKRELLSELIGVNNWQQVLVFAGTKESANTLAKELKLDGIKAALCHGDKTQ 297
>gi|345567939|gb|EGX50841.1| hypothetical protein AOL_s00054g927 [Arthrobotrys oligospora ATCC
24927]
Length = 706
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L+ ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 332 CDLLVATPGRLVDLIERGRISLASIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPGVTS 390
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + D V + VGR + SE+I Q++ + + + LL +
Sbjct: 391 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQRVEYVEDHDKRSFLLDIL 450
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L LIFV++K A L L + A IH D +Q +
Sbjct: 451 SAHQGGL---TLIFVETKRMADTLSDFLINQNFPATSIHGDRTQRE 493
>gi|333376736|ref|ZP_08468472.1| hypothetical protein HMPREF9456_00067 [Dysgonomonas mossii DSM
22836]
gi|332885949|gb|EGK06193.1| hypothetical protein HMPREF9456_00067 [Dysgonomonas mossii DSM
22836]
Length = 608
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 92/164 (56%), Gaps = 3/164 (1%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
K I+++TP RL I R+ ++LS V+Y+VLDE+D++ +G ++ ID ++ +
Sbjct: 120 KRGVQIIVATPGRLIDLINRRTVELSNVKYVVLDESDEMLNMG-FMESIDEILSKVPDER 178
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
++ LFSAT+P + ++ + M + + +GRKN S S+K +++ K LAL++
Sbjct: 179 LML-LFSATMPKEIAKITKKYMQNPKEITIGRKNEGSNSVKHVYYLVHAKD-KYLALKRI 236
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
N +IF +++ +E+ +L D A +H DLSQ Q
Sbjct: 237 ADYYPNIYGIIFCRTRRETQEIADKLIQDGYNADSLHGDLSQAQ 280
>gi|326430393|gb|EGD75963.1| vasa [Salpingoeca sp. ATCC 50818]
Length = 873
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 55/163 (33%), Positives = 90/163 (55%), Gaps = 3/163 (1%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
K C+++++TP RL I+ K +L RV YLVLDEAD++F++G L+ ++ ++ + P
Sbjct: 415 KDGCEVVVATPGRLIDLIKDKATNLRRVTYLVLDEADRMFDMGFSLQ-VNSIINH-TRPD 472
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
LF+AT VE+LAR + + VR++VG A+ I+Q++ K L+
Sbjct: 473 RQTLLFTATFKKKVEKLARQALRNPVRIVVGTVGKANTDIEQRVEIMQDTASKWGWLKAH 532
Query: 133 FAESLNP-PVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
E + VL+FV K A+ L+ + +A VIH D+ Q
Sbjct: 533 LVEMQSAGNVLVFVNKKADAETLHESMVAAGFQAVVIHGDIDQ 575
>gi|296807019|ref|XP_002844169.1| ATP-dependent RNA helicase DED1 [Arthroderma otae CBS 113480]
gi|238843652|gb|EEQ33314.1| ATP-dependent RNA helicase DED1 [Arthroderma otae CBS 113480]
Length = 680
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 335 CDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPPVAG 393
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + D V + VGR + SE+I QK+ + + + LL +
Sbjct: 394 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVEDADKRSVLLDIL 453
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L LIFV++K A L L A IH D +Q +
Sbjct: 454 HTHGAGL---TLIFVETKRMADSLSEFLINQHFPATAIHGDRTQRE 496
>gi|157117281|ref|XP_001653010.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108883352|gb|EAT47577.1| AAEL001317-PA [Aedes aegypti]
Length = 799
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 9/162 (5%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSI 73
+I+++TP R+ ++ K +L RV YLVLDEADK+F +G +P V++ N P
Sbjct: 404 EIVVATPGRMIDMVKMKATNLQRVTYLVLDEADKMFNLG-----FEPQVRSICNHVRPDR 458
Query: 74 VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 133
LFSAT +E LAR ++ D VR++ G A+E I Q ++ + K L
Sbjct: 459 QTMLFSATFKKRIERLARDVLTDPVRIMHGDLGEANEDITQHVIVMNNPAHKWNWLLAKM 518
Query: 134 AESLNP-PVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
E L+ VLIFV K A+++ L + ++H D+ Q
Sbjct: 519 VELLSEGTVLIFVTKKADAEQVANNLRLKEYDPVLLHGDMDQ 560
>gi|410903051|ref|XP_003965007.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Takifugu
rubripes]
Length = 872
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 55/163 (33%), Positives = 89/163 (54%), Gaps = 7/163 (4%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
+I++ TP RL +++K L RV YLV DEAD++F++G ++ + + P
Sbjct: 371 EIVVCTPGRLIDHVKKKATSLQRVTYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 428
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQ--KLVFAGSEEGKLLALRQ-SF 133
LFSAT +E LAR I+ D +RV+ G A+E + Q +++ +GS++ L R F
Sbjct: 429 LFSATFRKKIERLARDILVDPIRVVQGDIGEANEDVTQVVEMLLSGSDKWSWLTRRLVEF 488
Query: 134 AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
S VLIFV K ++EL L + G++H D+ Q++
Sbjct: 489 TSS--GSVLIFVTKKTNSEELAANLTQEGYSLGLLHGDMDQSE 529
>gi|442570183|sp|Q1DJF0.2|DED1_COCIM RecName: Full=ATP-dependent RNA helicase DED1
gi|392870139|gb|EAS27302.2| ATP-dependent RNA helicase DED1 [Coccidioides immitis RS]
Length = 665
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 88/166 (53%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI-- 73
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 319 CDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPPVNG 377
Query: 74 -VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + D V + VGR + SE+I QK+ + + + LL +
Sbjct: 378 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVEDADKRSVLLDIL 437
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L LIFV++K A L L + A IH D +Q +
Sbjct: 438 HTHGTGL---TLIFVETKRMADSLSEFLINQNFPATAIHGDRTQRE 480
>gi|320037809|gb|EFW19746.1| ATP-dependent RNA helicase DED1 [Coccidioides posadasii str.
Silveira]
Length = 666
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 88/166 (53%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI-- 73
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 320 CDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPPVNG 378
Query: 74 -VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + D V + VGR + SE+I QK+ + + + LL +
Sbjct: 379 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVEDADKRSVLLDIL 438
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L LIFV++K A L L + A IH D +Q +
Sbjct: 439 HTHGTGL---TLIFVETKRMADSLSEFLINQNFPATAIHGDRTQRE 481
>gi|303314883|ref|XP_003067450.1| ATP-dependent RNA helicase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240107118|gb|EER25305.1| ATP-dependent RNA helicase, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 668
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 88/166 (53%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI-- 73
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 322 CDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPPVNG 380
Query: 74 -VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + D V + VGR + SE+I QK+ + + + LL +
Sbjct: 381 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVEDADKRSVLLDIL 440
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L LIFV++K A L L + A IH D +Q +
Sbjct: 441 HTHGTGL---TLIFVETKRMADSLSEFLINQNFPATAIHGDRTQRE 483
>gi|255950086|ref|XP_002565810.1| Pc22g19070 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592827|emb|CAP99195.1| Pc22g19070 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 682
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 54/164 (32%), Positives = 85/164 (51%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L+ ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 338 CDLLVATPGRLVDLIERGRISLANIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPVVDN 396
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + D + + VGR + SE+I QK+ + + + + L
Sbjct: 397 RQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGSTSENITQKVEYVEDADKRSVLLDIL 456
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
LIFV++K A L L A IH D +Q +
Sbjct: 457 HTHGSTGLTLIFVETKRMADSLSDFLINQRFPATAIHGDRTQRE 500
>gi|119175420|ref|XP_001239942.1| hypothetical protein CIMG_09563 [Coccidioides immitis RS]
Length = 659
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 88/166 (53%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI-- 73
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 313 CDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPPVNG 371
Query: 74 -VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + D V + VGR + SE+I QK+ + + + LL +
Sbjct: 372 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVEDADKRSVLLDIL 431
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L LIFV++K A L L + A IH D +Q +
Sbjct: 432 HTHGTGL---TLIFVETKRMADSLSEFLINQNFPATAIHGDRTQRE 474
>gi|390600057|gb|EIN09452.1| DEAD-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 639
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 55/164 (33%), Positives = 86/164 (52%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L +TP RL I R +I L+ V+YLVLDEAD++ ++G I +V+ P +
Sbjct: 304 CDLLSATPGRLVDLIERGRISLANVKYLVLDEADRMLDMG-FEPQIRRIVQGEDMPGVQD 362
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + D + + VGR + SE+I Q++ F + + + L
Sbjct: 363 RQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGSTSENITQRIEFVEDHDKRSMLLDIL 422
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
A+ L+FV++K A L L A IH D +Q +
Sbjct: 423 TAQEKQGLTLVFVETKRMADMLSDFLYQSQFPATSIHGDRTQRE 466
>gi|119468751|ref|ZP_01611803.1| putative ATP-dependent RNA helicase with P-loop hydrolase domain;
DEAD-box protein family [Alteromonadales bacterium TW-7]
gi|119447807|gb|EAW29073.1| putative ATP-dependent RNA helicase with P-loop hydrolase domain;
DEAD-box protein family [Alteromonadales bacterium TW-7]
Length = 433
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 89/162 (54%), Gaps = 3/162 (1%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
K DI+++TP RL IR + L+ V++LVLDEAD++ ++G + + V+K+C++
Sbjct: 121 KAGVDIVVATPGRLLDHIRLGNLSLANVKHLVLDEADRMLDMG-FITDMQTVIKSCADDR 179
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ LFSAT P +++ A ++ V V + N+ + ++ Q +V+ E K L +
Sbjct: 180 QIL-LFSATFPAAIKQFASKVLKQPEIVRVDQTNSTASTV-QHVVYPVEERRKQELLSEL 237
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ VL+FV KD A EL EL D I A V H D SQ
Sbjct: 238 IGKKNWQQVLVFVNMKDTADELVKELNLDGIPATVCHGDKSQ 279
>gi|449469020|ref|XP_004152219.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 24-like [Cucumis
sativus]
Length = 777
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 88/166 (53%), Gaps = 9/166 (5%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-- 70
K C+I+++TP RL I+ K + +S+ YLVLDEAD++F++G +P +++
Sbjct: 352 KAGCEIVVATPGRLIDMIKLKALTMSKATYLVLDEADRMFDLG-----FEPQIRSIVGQI 406
Query: 71 -PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 129
P LFSAT+P VE+LAR I+ D VRV VG A+E I Q + S+ KL L
Sbjct: 407 RPDRQTLLFSATMPRKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWL 466
Query: 130 RQSFAESL-NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ E + + VL+F K E+ +L + +H D Q
Sbjct: 467 LEKLPEMIDDGDVLVFASKKATVDEVESQLLQKSFKVAALHGDKDQ 512
>gi|115398049|ref|XP_001214616.1| ATP-dependent RNA helicase ded1 [Aspergillus terreus NIH2624]
gi|121737954|sp|Q0CLJ6.1|DED1_ASPTN RecName: Full=ATP-dependent RNA helicase ded1
gi|114192807|gb|EAU34507.1| ATP-dependent RNA helicase ded1 [Aspergillus terreus NIH2624]
Length = 674
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 54/164 (32%), Positives = 85/164 (51%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YL+LDEAD++ ++G I +V+ P +
Sbjct: 324 CDLLVATPGRLVDLIERGRISLVNIKYLILDEADRMLDMG-FEPQIRRIVEGEDMPHVND 382
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + D V + VGR + SE+I QK+ + + + + L
Sbjct: 383 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVEDHDKRSVLLDIL 442
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ LIFV++K A L L A IH D +Q +
Sbjct: 443 HTHGTSGLTLIFVETKRMADSLSDFLLNQRFPATAIHGDRTQRE 486
>gi|169773691|ref|XP_001821314.1| ATP-dependent RNA helicase ded1 [Aspergillus oryzae RIB40]
gi|91206555|sp|Q2UGK3.1|DED1_ASPOR RecName: Full=ATP-dependent RNA helicase ded1
gi|83769175|dbj|BAE59312.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 675
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 54/164 (32%), Positives = 85/164 (51%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YL+LDEAD++ ++G I +V+ P +
Sbjct: 324 CDLLVATPGRLVDLIERGRISLVNIKYLILDEADRMLDMG-FEPQIRRIVEGEDMPHVND 382
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + D V + VGR + SE+I QK+ + + + + L
Sbjct: 383 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVEDHDKRSVLLDIL 442
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ LIFV++K A L L A IH D +Q +
Sbjct: 443 HTHGTSGLTLIFVETKRMADSLSDFLLNQRFPATAIHGDRTQRE 486
>gi|358366063|dbj|GAA82684.1| ATP dependent RNA helicase [Aspergillus kawachii IFO 4308]
Length = 676
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 54/164 (32%), Positives = 85/164 (51%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YL+LDEAD++ ++G I +V+ P +
Sbjct: 325 CDLLVATPGRLVDLIERGRISLVNIKYLILDEADRMLDMG-FEPQIRRIVEGEDMPHVND 383
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + D V + VGR + SE+I QK+ + + + + L
Sbjct: 384 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVEDHDKRSVLLDIL 443
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ LIFV++K A L L A IH D +Q +
Sbjct: 444 HTHGTSGLTLIFVETKRMADSLSDFLLNQRFPATAIHGDRTQRE 487
>gi|238491700|ref|XP_002377087.1| ATP dependent RNA helicase (Dbp1), putative [Aspergillus flavus
NRRL3357]
gi|220697500|gb|EED53841.1| ATP dependent RNA helicase (Dbp1), putative [Aspergillus flavus
NRRL3357]
Length = 676
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 54/164 (32%), Positives = 85/164 (51%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YL+LDEAD++ ++G I +V+ P +
Sbjct: 325 CDLLVATPGRLVDLIERGRISLVNIKYLILDEADRMLDMG-FEPQIRRIVEGEDMPHVND 383
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + D V + VGR + SE+I QK+ + + + + L
Sbjct: 384 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVEDHDKRSVLLDIL 443
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ LIFV++K A L L A IH D +Q +
Sbjct: 444 HTHGTSGLTLIFVETKRMADSLSDFLLNQRFPATAIHGDRTQRE 487
>gi|145256950|ref|XP_001401571.1| ATP-dependent RNA helicase ded1 [Aspergillus niger CBS 513.88]
gi|134034089|sp|A2QI25.1|DED1_ASPNC RecName: Full=ATP-dependent RNA helicase ded1
gi|134058481|emb|CAL00690.1| unnamed protein product [Aspergillus niger]
Length = 678
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 54/164 (32%), Positives = 85/164 (51%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YL+LDEAD++ ++G I +V+ P +
Sbjct: 325 CDLLVATPGRLVDLIERGRISLVNIKYLILDEADRMLDMG-FEPQIRRIVEGEDMPHVND 383
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + D V + VGR + SE+I QK+ + + + + L
Sbjct: 384 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVEDHDKRSVLLDIL 443
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ LIFV++K A L L A IH D +Q +
Sbjct: 444 HTHGTSGLTLIFVETKRMADSLSDFLLNQRFPATAIHGDRTQRE 487
>gi|428151523|ref|ZP_18999239.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
gi|427538506|emb|CCM95377.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
Length = 459
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 86/164 (52%), Gaps = 7/164 (4%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + + L +VE LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVSLDKVEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 73 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
R LFSAT D ++ LA ++H+ + V V R+NTASE I Q + F + L L
Sbjct: 179 ARRQNLLFSATFSDEIKGLAEKLLHNPLEVEVARRNTASEQITQHVHFVDKNRKREL-LS 237
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
Q E VL+F ++K A L +L D IR+ IH + SQ
Sbjct: 238 QLIGEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQ 281
>gi|425080638|ref|ZP_18483735.1| ATP-dependent RNA helicase rhlE [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|428933930|ref|ZP_19007468.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae JHCK1]
gi|405605773|gb|EKB78777.1| ATP-dependent RNA helicase rhlE [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|426304047|gb|EKV66201.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae JHCK1]
Length = 451
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 86/164 (52%), Gaps = 7/164 (4%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + + L +VE LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVSLDKVEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 73 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
R LFSAT D ++ LA ++H+ + V V R+NTASE I Q + F + L L
Sbjct: 179 ARRQNLLFSATFSDEIKGLAEKLLHNPLEVEVARRNTASEQITQHVHFVDKNRKREL-LS 237
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
Q E VL+F ++K A L +L D IR+ IH + SQ
Sbjct: 238 QLIGEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQ 281
>gi|359448696|ref|ZP_09238216.1| ATP-dependent RNA helicase rhlE [Pseudoalteromonas sp. BSi20480]
gi|358045506|dbj|GAA74465.1| ATP-dependent RNA helicase rhlE [Pseudoalteromonas sp. BSi20480]
Length = 433
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 89/162 (54%), Gaps = 3/162 (1%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
K DI+++TP RL IR + L+ V++LVLDEAD++ ++G + + V+K+C++
Sbjct: 121 KAGVDIVVATPGRLLDHIRLGNLSLANVKHLVLDEADRMLDMG-FITDMQTVIKSCADDR 179
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ LFSAT P +++ A ++ V V + N+ + ++ Q +V+ E K L +
Sbjct: 180 QIL-LFSATFPAAIKQFASKVLKQPEIVRVDQTNSTASTV-QHVVYPVEERRKQELLSEL 237
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ VL+FV KD A EL EL D I A V H D SQ
Sbjct: 238 IGKKNWQQVLVFVNMKDTADELVKELNLDGIPATVCHGDKSQ 279
>gi|392537500|ref|ZP_10284637.1| ATP-dependent RNA helicase [Pseudoalteromonas marina mano4]
Length = 433
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 89/162 (54%), Gaps = 3/162 (1%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
K DI+++TP RL IR + L+ V++LVLDEAD++ ++G + + V+K+C++
Sbjct: 121 KAGVDIVVATPGRLLDHIRLGNLSLANVKHLVLDEADRMLDMG-FITDMQTVIKSCADDR 179
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ LFSAT P +++ A ++ V V + N+ + ++ Q +V+ E K L +
Sbjct: 180 QIL-LFSATFPAAIKQFASKVLKQPEIVRVDQTNSTASTV-QHVVYPVEERRKQELLSEL 237
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ VL+FV KD A EL EL D I A V H D SQ
Sbjct: 238 IGKKNWQQVLVFVNMKDTADELVKELNLDGIPATVCHGDKSQ 279
>gi|449484206|ref|XP_004156816.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
24-like [Cucumis sativus]
Length = 774
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 88/166 (53%), Gaps = 9/166 (5%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-- 70
K C+I+++TP RL I+ K + +S+ YLVLDEAD++F++G +P +++
Sbjct: 355 KAGCEIVVATPGRLIDMIKLKALTMSKATYLVLDEADRMFDLG-----FEPQIRSIVGQI 409
Query: 71 -PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 129
P LFSAT+P VE+LAR I+ D VRV VG A+E I Q + S+ KL L
Sbjct: 410 RPDRQTLLFSATMPRKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWL 469
Query: 130 RQSFAESL-NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ E + + VL+F K E+ +L + +H D Q
Sbjct: 470 LEKLPEMIDDGDVLVFASKKATVDEVESQLLQKSFKVAALHGDKDQ 515
>gi|425782977|gb|EKV20854.1| ATP dependent RNA helicase (Dbp1), putative [Penicillium digitatum
Pd1]
Length = 689
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 54/164 (32%), Positives = 85/164 (51%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L+ ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 334 CDLLVATPGRLVDLIERGRISLANIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPGVDD 392
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + D + + VGR + SE+I QK+ + + + + L
Sbjct: 393 RQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGSTSENITQKVEYVEDADKRSVLLDIL 452
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
LIFV++K A L L A IH D +Q +
Sbjct: 453 HTHGSTGLTLIFVETKRMADSLSDFLINQRFPATAIHGDRTQRE 496
>gi|425781809|gb|EKV19753.1| ATP dependent RNA helicase (Dbp1), putative [Penicillium digitatum
PHI26]
Length = 691
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 54/164 (32%), Positives = 85/164 (51%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L+ ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 334 CDLLVATPGRLVDLIERGRISLANIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPGVDD 392
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + D + + VGR + SE+I QK+ + + + + L
Sbjct: 393 RQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGSTSENITQKVEYVEDADKRSVLLDIL 452
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
LIFV++K A L L A IH D +Q +
Sbjct: 453 HTHGSTGLTLIFVETKRMADSLSDFLINQRFPATAIHGDRTQRE 496
>gi|421909360|ref|ZP_16339178.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|410116748|emb|CCM81803.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
Length = 463
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 86/164 (52%), Gaps = 7/164 (4%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + + L +VE LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVSLDKVEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 73 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
R LFSAT D ++ LA ++H+ + V V R+NTASE I Q + F + L L
Sbjct: 179 ARRQNLLFSATFSDEIKGLAEKLLHNPLEVEVARRNTASEQITQHVHFVDKNRKREL-LS 237
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
Q E VL+F ++K A L +L D IR+ IH + SQ
Sbjct: 238 QLIGEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQ 281
>gi|346974239|gb|EGY17691.1| ATP-dependent RNA helicase ded1 [Verticillium dahliae VdLs.17]
Length = 677
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 319 CDLLVATPGRLVDLIERGRISLQNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPGVQN 377
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + D V + VGR + SE+I QK+ + + + LL +
Sbjct: 378 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVEDVDKRSVLLDIL 437
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L LIFV++K A L L A IH D +Q +
Sbjct: 438 HTHGAGL---TLIFVETKRMADSLSDFLINQSFPATSIHGDRTQRE 480
>gi|116206328|ref|XP_001228973.1| hypothetical protein CHGG_02457 [Chaetomium globosum CBS 148.51]
gi|121789113|sp|Q2HBE7.1|DED1_CHAGB RecName: Full=ATP-dependent RNA helicase DED1
gi|88183054|gb|EAQ90522.1| hypothetical protein CHGG_02457 [Chaetomium globosum CBS 148.51]
Length = 688
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 91/166 (54%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P+ +
Sbjct: 333 CDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMG-FEPQIRRIVQGEDMPTTGQ 391
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LA+ ++D V + VGR + SE+I QK+ + + + LL +
Sbjct: 392 RQTLMFSATFPRDIQMLAQDFLNDYVFLSVGRVGSTSENITQKVEYVEDVDKRSVLLDIL 451
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ A L LIFV++K A L L + A IH D +Q +
Sbjct: 452 HTHAGGL---TLIFVETKRMADSLSDFLINQNFPATSIHGDRTQRE 494
>gi|421918244|ref|ZP_16347776.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|410119452|emb|CCM90401.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
Length = 418
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 86/164 (52%), Gaps = 7/164 (4%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + + L +VE LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVSLDKVEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 73 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
R LFSAT D ++ LA ++H+ + V V R+NTASE I Q + F + L L
Sbjct: 179 ARRQNLLFSATFSDEIKGLAEKLLHNPLEVEVARRNTASEQITQHVHFVDKNRKREL-LS 237
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
Q E VL+F ++K A L +L D IR+ IH + SQ
Sbjct: 238 QLIGEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQ 281
>gi|335044249|ref|ZP_08537274.1| superfamily II DNA and RNA helicase [Methylophaga
aminisulfidivorans MP]
gi|333787495|gb|EGL53379.1| superfamily II DNA and RNA helicase [Methylophaga
aminisulfidivorans MP]
Length = 403
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 85/167 (50%), Gaps = 15/167 (8%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG------NLLKHIDPVVKAC 68
CD++I+TP RL + + + DLS +E++V+DEAD++ ++G LL I + C
Sbjct: 122 GCDVIIATPGRLLNLVEQDQADLSLIEFVVIDEADRMLDMGQGPDVATLLASITTAFQTC 181
Query: 69 SNPSIVRSLFSATLPDF-VEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLL 127
LFSATL VE A +++ DA RV V N +E ++Q++ A + E K
Sbjct: 182 --------LFSATLAGAGVEIFANTLLPDATRVDVNASNQYAEQVQQRVYLADNREHKQA 233
Query: 128 ALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
L L+F K+RA E+ L +I A V+H + SQ
Sbjct: 234 LLTAVINSDDCKSALVFCNKKERADEVADYLQSQNISAQVVHGEFSQ 280
>gi|440635646|gb|ELR05565.1| hypothetical protein GMDG_07485 [Geomyces destructans 20631-21]
Length = 690
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 88/166 (53%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 330 CDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPGVQG 388
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + D V + VGR + SE+I QK+ + + + LL +
Sbjct: 389 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVEDMDKRSVLLDIL 448
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L LIFV++K A L L + A IH D +Q +
Sbjct: 449 HTHGAGL---TLIFVETKRMADSLSDFLINQNFPATSIHGDRTQRE 491
>gi|410077537|ref|XP_003956350.1| hypothetical protein KAFR_0C02220 [Kazachstania africana CBS 2517]
gi|372462934|emb|CCF57215.1| hypothetical protein KAFR_0C02220 [Kazachstania africana CBS 2517]
Length = 511
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 92/167 (55%), Gaps = 9/167 (5%)
Query: 18 ILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS- 76
++++TP RL I+ ++LS+V+YLVLDEAD++ E G + I ++K + R
Sbjct: 220 VVVATPGRLLDLIQEGSVNLSKVQYLVLDEADRMLEKG-FEEDIKNIIKETNGNRANRQT 278
Query: 77 -LFSATLPDFVEELARSIMHDAVRVIVGRKN--TASESIKQ--KLVFAGSEEGKLLALRQ 131
+F+AT P V ELA + M D V+V +G ++ TA++ I Q ++V ++E KLL L +
Sbjct: 279 LMFTATWPKEVRELASTFMRDPVKVSIGNRDELTANKRITQIVEVVEPHTKERKLLDLLK 338
Query: 132 SF--AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ N VLIF K A + L ++ IH DLSQ Q
Sbjct: 339 KYQGGAKKNDKVLIFALYKKEAARVERNLRYNGYDVAAIHGDLSQQQ 385
>gi|449052728|ref|ZP_21732359.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae hvKP1]
gi|448875863|gb|EMB10868.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae hvKP1]
Length = 451
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 89/163 (54%), Gaps = 5/163 (3%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + + L +VE LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVSLDKVEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 73 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
++L FSAT D ++ LA ++H+ + V V R+NTASE I Q + F + L L Q
Sbjct: 180 RRQNLLFSATFSDEIKGLAEKLLHNPLEVEVARRNTASEQITQHVHFVDKNRKREL-LSQ 238
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
E VL+F ++K A L +L D IR+ IH + SQ
Sbjct: 239 LIGEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQ 281
>gi|353239459|emb|CCA71370.1| probable DED1-ATP-dependent RNA helicase [Piriformospora indica DSM
11827]
Length = 650
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 55/164 (33%), Positives = 87/164 (53%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L +TP RL I R +I L+ ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 322 CDLLSATPGRLVDLIERGRISLANIKYLVLDEADRMLDMG-FEPQIRRIVQGEDMPGVRE 380
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + + + + VGR + SE+I QK+ + ++ + + L
Sbjct: 381 RQTLMFSATFPRDIQILARDFLKEYIFLSVGRVGSTSENITQKIEYVEDQDKRSVLLDIL 440
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
AE LIFV++K A L L A IH D +Q +
Sbjct: 441 NAEEQTGLTLIFVETKRMADMLSDFLMAQHYPATSIHGDRTQRE 484
>gi|152969387|ref|YP_001334496.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|365139153|ref|ZP_09345663.1| ATP-dependent RNA helicase rhlE [Klebsiella sp. 4_1_44FAA]
gi|378977819|ref|YP_005225960.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|386033962|ref|YP_005953875.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae KCTC 2242]
gi|419974710|ref|ZP_14490127.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|419977806|ref|ZP_14493104.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|419987058|ref|ZP_14502183.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|419991473|ref|ZP_14506438.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|419997938|ref|ZP_14512730.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|420003806|ref|ZP_14518449.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|420006904|ref|ZP_14521400.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|420012540|ref|ZP_14526853.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|420020791|ref|ZP_14534976.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|420024066|ref|ZP_14538080.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|420031055|ref|ZP_14544878.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|420038792|ref|ZP_14552435.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|420041896|ref|ZP_14555391.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|420046990|ref|ZP_14560308.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|420056136|ref|ZP_14569296.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|420061472|ref|ZP_14574460.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|420064158|ref|ZP_14576968.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|420069526|ref|ZP_14582181.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|420078157|ref|ZP_14590617.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|420084520|ref|ZP_14596776.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|424829756|ref|ZP_18254484.1| putative ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae
subsp. pneumoniae Ecl8]
gi|424934331|ref|ZP_18352703.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|425077527|ref|ZP_18480630.1| ATP-dependent RNA helicase rhlE [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425088160|ref|ZP_18491253.1| ATP-dependent RNA helicase rhlE [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|425090700|ref|ZP_18493785.1| ATP-dependent RNA helicase rhlE [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|428940153|ref|ZP_19013245.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae VA360]
gi|150954236|gb|ABR76266.1| putative ATP-dependent RNA helicase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|339761090|gb|AEJ97310.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae KCTC 2242]
gi|363654512|gb|EHL93410.1| ATP-dependent RNA helicase rhlE [Klebsiella sp. 4_1_44FAA]
gi|364517230|gb|AEW60358.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|397345127|gb|EJJ38254.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|397345977|gb|EJJ39096.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|397353346|gb|EJJ46420.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|397361555|gb|EJJ54216.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|397363734|gb|EJJ56371.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|397368249|gb|EJJ60856.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|397381416|gb|EJJ73587.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|397385751|gb|EJJ77846.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|397387462|gb|EJJ79487.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|397399449|gb|EJJ91101.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|397400795|gb|EJJ92433.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|397403895|gb|EJJ95434.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|397417455|gb|EJK08620.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|397417749|gb|EJK08912.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|397420966|gb|EJK12007.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|397430627|gb|EJK21316.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|397433767|gb|EJK24410.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|397442774|gb|EJK33116.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|397445167|gb|EJK35418.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|397450132|gb|EJK40246.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|405593236|gb|EKB66688.1| ATP-dependent RNA helicase rhlE [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405602292|gb|EKB75434.1| ATP-dependent RNA helicase rhlE [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|405613678|gb|EKB86407.1| ATP-dependent RNA helicase rhlE [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|407808518|gb|EKF79769.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|414707181|emb|CCN28885.1| putative ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae
subsp. pneumoniae Ecl8]
gi|426302754|gb|EKV64945.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae VA360]
Length = 451
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 89/163 (54%), Gaps = 5/163 (3%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + + L +VE LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVSLDKVEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 73 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
++L FSAT D ++ LA ++H+ + V V R+NTASE I Q + F + L L Q
Sbjct: 180 RRQNLLFSATFSDEIKGLAEKLLHNPLEVEVARRNTASEQITQHVHFVDKNRKREL-LSQ 238
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
E VL+F ++K A L +L D IR+ IH + SQ
Sbjct: 239 LIGEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQ 281
>gi|238893853|ref|YP_002918587.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|402781658|ref|YP_006637204.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|238546169|dbj|BAH62520.1| putative ATP-dependent RNA helicase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|402542534|gb|AFQ66683.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae 1084]
Length = 451
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 86/164 (52%), Gaps = 7/164 (4%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + + L +VE LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVSLDKVEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 73 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
R LFSAT D ++ LA ++H+ + V V R+NTASE I Q + F + L L
Sbjct: 179 ARRQNLLFSATFSDEIKGLAEKLLHNPLEVEVARRNTASEQITQHVHFVDKNRKREL-LS 237
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
Q E VL+F ++K A L +L D IR+ IH + SQ
Sbjct: 238 QLIGEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQ 281
>gi|353558872|sp|C8V8H4.1|DED1_EMENI RecName: Full=ATP-dependent RNA helicase ded1
gi|259482717|tpe|CBF77461.1| TPA: ATP-dependent RNA helicase ded1 (EC 3.6.1.-)
[Source:UniProtKB/Swiss-Prot;Acc:P0C2M6] [Aspergillus
nidulans FGSC A4]
Length = 668
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 54/164 (32%), Positives = 85/164 (51%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YL+LDEAD++ ++G I +V+ P++
Sbjct: 322 CDLLVATPGRLVDLIERGRISLVNIKYLILDEADRMLDMG-FEPQIRRIVEGEDMPNVND 380
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + D V + VGR + SE+I QK+ + + + + L
Sbjct: 381 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVEDHDKRSVLLDIL 440
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
LIFV++K A L L A IH D +Q +
Sbjct: 441 HTHGTTGLTLIFVETKRMADALSEFLINQRFPATAIHGDRTQRE 484
>gi|390433214|ref|ZP_10221752.1| ATP-dependent RNA helicase RhlE [Pantoea agglomerans IG1]
Length = 456
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 88/164 (53%), Gaps = 7/164 (4%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL ++ +DLS+VE LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDILVATPGRLLDLAQQNAVDLSQVEILVLDEADRMLDMG----FIHDIRRVLARLP 178
Query: 73 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
R LFSAT D ++ LA ++ + + V R+NTASE + Q++ F + + L L
Sbjct: 179 AKRQNLLFSATFSDEIKGLAEKLLTNPEMIEVARRNTASEQVAQQVAFVDKKRKREL-LS 237
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
Q E VL+F ++K A L +L D I A IH + SQ
Sbjct: 238 QLIGEGNWQQVLVFTRTKHGANHLAEQLGKDGISAAAIHGNKSQ 281
>gi|372277732|ref|ZP_09513768.1| ATP-dependent RNA helicase RhlE [Pantoea sp. SL1_M5]
Length = 457
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 88/164 (53%), Gaps = 7/164 (4%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL ++ +DLS+VE LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDILVATPGRLLDLAQQNAVDLSQVEILVLDEADRMLDMG----FIHDIRRVLARLP 178
Query: 73 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
R LFSAT D ++ LA ++ + + V R+NTASE + Q++ F + + L L
Sbjct: 179 AKRQNLLFSATFSDEIKGLAEKLLTNPEMIEVARRNTASEQVAQQVAFVDKKRKREL-LS 237
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
Q E VL+F ++K A L +L D I A IH + SQ
Sbjct: 238 QLIGEGNWQQVLVFTRTKHGANHLAEQLGKDGISAAAIHGNKSQ 281
>gi|391869233|gb|EIT78435.1| ATP-dependent RNA helicase [Aspergillus oryzae 3.042]
Length = 652
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 54/164 (32%), Positives = 85/164 (51%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YL+LDEAD++ ++G I +V+ P +
Sbjct: 301 CDLLVATPGRLVDLIERGRISLVNIKYLILDEADRMLDMG-FEPQIRRIVEGEDMPHVND 359
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + D V + VGR + SE+I QK+ + + + + L
Sbjct: 360 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVEDHDKRSVLLDIL 419
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ LIFV++K A L L A IH D +Q +
Sbjct: 420 HTHGTSGLTLIFVETKRMADSLSDFLLNQRFPATAIHGDRTQRE 463
>gi|47217820|emb|CAG07234.1| unnamed protein product [Tetraodon nigroviridis]
Length = 737
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 56/163 (34%), Positives = 89/163 (54%), Gaps = 7/163 (4%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
+I++ TP RL +++K L RV YLV DEAD++F++G ++ + + P
Sbjct: 226 EIVVCTPGRLIDHVKKKATSLQRVTYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 283
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQ--KLVFAGSEEGKLLALRQ-SF 133
LFSAT +E LAR I+ D +RV+ G A+E + Q +L+ +GS++ L R F
Sbjct: 284 LFSATFRKKIERLARDILVDPIRVVQGDIGEANEDVTQVVELLLSGSDKWSWLTRRLVEF 343
Query: 134 AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
S VLIFV K ++EL L + G++H D+ Q++
Sbjct: 344 TSS--GSVLIFVTKKTNSEELATNLTQEGYSLGLLHGDMDQSE 384
>gi|328855473|gb|EGG04599.1| hypothetical protein MELLADRAFT_78286 [Melampsora larici-populina
98AG31]
Length = 646
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 54/164 (32%), Positives = 85/164 (51%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L +TP RL I R +I LS + YLVLDEAD++ ++G I +V P +
Sbjct: 297 CDLLSATPGRLVDLIERGRISLSNIRYLVLDEADRMLDMG-FEPQIRRIVTGEDMPGVHE 355
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LA+ + D + + VGR + SE+I QK+ + + + + L
Sbjct: 356 RQTLMFSATFPRDIQMLAKDFLKDYIFLSVGRVGSTSENITQKVEYVEDADKRSVLLDIL 415
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L+FV++K A L G L + A IH D +Q +
Sbjct: 416 TSMPQGGLTLVFVETKRMADMLEGFLVSSNFAATSIHGDRTQRE 459
>gi|407799857|ref|ZP_11146735.1| DEAD/DEAH box helicase [Oceaniovalibus guishaninsula JLT2003]
gi|407058334|gb|EKE44292.1| DEAD/DEAH box helicase [Oceaniovalibus guishaninsula JLT2003]
Length = 429
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 92/164 (56%), Gaps = 7/164 (4%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
D+L++TP RL + R+ + L +LVLDEAD++ ++G + L+ I P++
Sbjct: 124 GVDLLVATPGRLIDLLDRRAVRLDETRFLVLDEADQMLDMGFIHALRRIAPLLAKERQ-- 181
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
LFSAT+P + E+A S + + +R+ V R A++ ++Q++ F S++GK LR+
Sbjct: 182 --TMLFSATMPKLMNEIANSYLMNPIRIEVARPGQAADKVEQEVHFV-SKDGKTDLLREM 238
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L+F ++K A++L +L D +A IH + SQ Q
Sbjct: 239 LNKHPGDRALVFARTKHGAEKLMKQLDRDGYKAASIHGNKSQGQ 282
>gi|340904824|gb|EGS17192.1| hypothetical protein CTHT_0065070 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 658
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 314 CDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMG-FEPQIRRIVQGEDMPPTGK 372
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LA+ +HD + + VGR + SE+I QK+ + + + LL +
Sbjct: 373 RQTLMFSATFPRDIQMLAQDFLHDYIFLSVGRVGSTSENITQKIEYVEDIDKRSVLLDIL 432
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L LIFV++K A L L + A IH D +Q +
Sbjct: 433 HTHTGGL---TLIFVETKRMADSLCDFLINQNFPATSIHGDRTQRE 475
>gi|388857567|emb|CCF48923.1| probable DED1-ATP-dependent RNA helicase [Ustilago hordei]
Length = 663
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 55/164 (33%), Positives = 88/164 (53%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L +TP RL + R +I LS V +LVLDEAD++ ++G I +V+ P ++
Sbjct: 318 CDLLCATPGRLVDLMERGRISLSNVRFLVLDEADRMLDMG-FEPQIRRIVEGEDMPGVMD 376
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LA+ + + V + VGR + SE+I QK+ + E+ + + L
Sbjct: 377 RQTLMFSATFPRDIQLLAKDFLKEYVFLSVGRVGSTSENITQKIEYVEDEDKRSVLLDVL 436
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ LIFV++K A L L +I A IH D +Q +
Sbjct: 437 ASMPSGGLTLIFVETKRMADMLSDFLLRSNIAATSIHGDRTQRE 480
>gi|339998715|ref|YP_004729598.1| ATP-dependent RNA helicase rhlE [Salmonella bongori NCTC 12419]
gi|339512076|emb|CCC29797.1| putative ATP-dependent RNA helicase rhlE [Salmonella bongori NCTC
12419]
Length = 451
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 87/162 (53%), Gaps = 3/162 (1%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ D+L++TP RL + + L +VE LVLDEAD++ ++G + H V A P
Sbjct: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFI--HDIRRVLAKLPPK 180
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
LFSAT D ++ LA ++H+ + + V R+NTASE + Q + F + + L L Q
Sbjct: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASEQVTQHVHFVDKKRKREL-LSQM 239
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ VL+F ++K A L +L D IR+ IH + SQ
Sbjct: 240 IGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQ 281
>gi|304395765|ref|ZP_07377648.1| DEAD/DEAH box helicase domain protein [Pantoea sp. aB]
gi|304357059|gb|EFM21423.1| DEAD/DEAH box helicase domain protein [Pantoea sp. aB]
Length = 457
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 88/164 (53%), Gaps = 7/164 (4%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL ++ +DLS+VE LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDILVATPGRLLDLAQQNAVDLSQVEVLVLDEADRMLDMG----FIHDIRRVLARLP 178
Query: 73 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
R LFSAT D ++ LA ++ + + V R+NTASE + Q++ F + + L L
Sbjct: 179 AKRQNLLFSATFSDEIKGLAEKLLTNPEMIEVARRNTASEQVAQQVAFVDKKRKREL-LS 237
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
Q E VL+F ++K A L +L D I A IH + SQ
Sbjct: 238 QLIGEGNWQQVLVFTRTKHGANHLAEQLGKDGISAAAIHGNKSQ 281
>gi|391329499|ref|XP_003739209.1| PREDICTED: ATP-dependent RNA helicase DDX3Y-like [Metaseiulus
occidentalis]
Length = 717
Score = 83.6 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 62/182 (34%), Positives = 91/182 (50%), Gaps = 17/182 (9%)
Query: 10 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
DL K C +L++TP RL I R K+ L V +LVLDEAD++ ++G I +V
Sbjct: 342 DLDK-GCQLLVATPGRLWDMIERGKVALDLVRFLVLDEADRMLDMG-FEPQIKKIVYDSG 399
Query: 70 NPSIVRS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK- 125
P +FSAT P V+ELA S +HD + + VGR + SE+I QK+V+ ++ +
Sbjct: 400 MPETGERQTLMFSATFPKKVQELATSFLHDYIFLAVGRVGSTSENITQKIVWVEEQDKRE 459
Query: 126 -LLALRQSFAESLNPP----------VLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
LL L ++ P L+FV++K A L L + IH D SQ
Sbjct: 460 FLLDLLEAAGLRCGPDGLAPGSSETLTLVFVETKKGADSLENFLIREGYPVTSIHGDRSQ 519
Query: 175 TQ 176
+
Sbjct: 520 GE 521
>gi|315123425|ref|YP_004065431.1| ATP-dependent RNA helicase [Pseudoalteromonas sp. SM9913]
gi|359438791|ref|ZP_09228788.1| ATP-dependent RNA helicase rhlE [Pseudoalteromonas sp. BSi20311]
gi|359443935|ref|ZP_09233747.1| ATP-dependent RNA helicase rhlE [Pseudoalteromonas sp. BSi20439]
gi|315017185|gb|ADT70522.1| ATP-dependent RNA helicase [Pseudoalteromonas sp. SM9913]
gi|358026522|dbj|GAA65037.1| ATP-dependent RNA helicase rhlE [Pseudoalteromonas sp. BSi20311]
gi|358042240|dbj|GAA69996.1| ATP-dependent RNA helicase rhlE [Pseudoalteromonas sp. BSi20439]
Length = 433
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 90/162 (55%), Gaps = 3/162 (1%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
K DI+++TP RL IR + L++V++LVLDEAD++ ++G + + V+K+C++
Sbjct: 121 KEGVDIVVATPGRLLDHIRLGNLSLAQVKHLVLDEADRMLDMG-FINDMQSVIKSCADER 179
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ LFSAT P +++ A ++ V V + N+ + ++ Q +V+ E K L +
Sbjct: 180 QIL-LFSATFPAAIKQFASKVLKQPEIVRVDQTNSTASTV-QHVVYPVEERRKQELLSEL 237
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ VL+FV K+ A EL EL D I A V H D SQ
Sbjct: 238 IGKKNWQQVLVFVNMKETADELVTELNLDGIPAAVCHGDKSQ 279
>gi|337293255|emb|CCB91245.1| ATP-dependent RNA helicase rhlE [Waddlia chondrophila 2032/99]
Length = 355
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 92/162 (56%), Gaps = 6/162 (3%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVK-ACSNPSIVR 75
+ILI+TP RL I +K I+LS +E LVLDEAD++ ++G I+PV K A + PS +
Sbjct: 126 EILIATPGRLIDYINQKAINLSAIEILVLDEADRMLDMG----FIEPVEKIAAATPSSRQ 181
Query: 76 SL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
+L FSAT+ V L+ ++++ + +++ + T E+I QKL + + K L
Sbjct: 182 TLLFSATMQGSVLNLSNRLLNEPMDIVIHSEKTKHENITQKLHYVDGLQHKNQLLEHILN 241
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + ++F +K A +L EL + AG +H D+SQ Q
Sbjct: 242 DDVVKHAIVFTSTKRHASQLVFELHDKGLLAGALHGDMSQRQ 283
>gi|310794364|gb|EFQ29825.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 695
Score = 83.6 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P++
Sbjct: 328 CDLLVATPGRLVDLIERGRISLQNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPNVQN 386
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + D + + VGR + SE+I QK+ + + + LL +
Sbjct: 387 RQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGSTSENITQKVEYVEDVDKRSVLLDIL 446
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L LIFV++K A L L + A IH D +Q +
Sbjct: 447 HTHGAGL---TLIFVETKRMADSLSDFLINQNFPATSIHGDRTQRE 489
>gi|300121126|emb|CBK21507.2| unnamed protein product [Blastocystis hominis]
Length = 518
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 87/161 (54%), Gaps = 3/161 (1%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
CDIL+ TP R++ I+R + L + +LVLDEAD++ ++G I +V+ P
Sbjct: 267 GCDILVGTPGRVKDMIQRGILGLEGITHLVLDEADRMLDMG-FEPQIRDIVEQSGMPRNR 325
Query: 75 RSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 133
++L FSAT PD ++ LA + D V + VGR A++ I+Q++++ + K L
Sbjct: 326 QTLMFSATFPDEIQRLAGDFLIDYVFLAVGRVGGAAQDIEQRVIYV-EDADKDSYLLHEL 384
Query: 134 AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
N +LIFV++K +A L L +A IH D SQ
Sbjct: 385 ENWGNGRILIFVETKRKADILQRYLTTQHFQAASIHGDRSQ 425
>gi|449662055|ref|XP_002163251.2| PREDICTED: ATP-dependent RNA helicase DDX42-like [Hydra
magnipapillata]
Length = 790
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 84/164 (51%), Gaps = 9/164 (5%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---P 71
+I++ TP RL I+ K +L RV YLV DEAD++F++G +P V++ +N P
Sbjct: 399 GAEIVVCTPGRLIDLIKAKATNLLRVTYLVFDEADRMFDMG-----FEPQVRSIANNVRP 453
Query: 72 SIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
LFSAT+ VE L R I+ D +R++VG A+E I Q + S + K L
Sbjct: 454 DRQCLLFSATMKKKVEWLCRDILSDPIRIVVGELGEANEDIVQAVEVMKSPQQKWNWLLS 513
Query: 132 SFAE-SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
E + VLIFV K ++E+ L G+IH D Q
Sbjct: 514 HIVEFTSGGSVLIFVTKKSNSEEVAANLKEQGYELGLIHGDFDQ 557
>gi|37525462|ref|NP_928806.1| ATP-dependent RNA helicase RhlE [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36784890|emb|CAE13804.1| ATP-dependent RNA helicase RhlE [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 434
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 91/164 (55%), Gaps = 7/164 (4%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + +DLSRVE LVLDEAD++ ++G + I V+ P
Sbjct: 129 RGGVDILVATPGRLLDLEHQNAVDLSRVEILVLDEADRMLDMG-FIHDIRRVLNKLP-PK 186
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSE-EGKLLALRQ 131
LFSAT D ++ LA ++ D V V V R+N+ASE I+Q + F + +G+LL+
Sbjct: 187 RQNLLFSATFSDDIKSLASKLLRDPVSVEVARRNSASEQIEQLVHFVDKKRKGELLSF-- 244
Query: 132 SFAESLN-PPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
S N VL+F ++K A L +L D + A IH + SQ
Sbjct: 245 -LIGSRNWQQVLVFTRTKHGANRLAEQLNKDGVTASAIHGNKSQ 287
>gi|225437591|ref|XP_002277419.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 24 [Vitis vinifera]
gi|297743992|emb|CBI36962.3| unnamed protein product [Vitis vinifera]
Length = 771
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 86/166 (51%), Gaps = 9/166 (5%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-- 70
K C+I+I+TP RL I+ K + + R YLVLDEAD++F++G +P +++
Sbjct: 347 KSGCEIVIATPGRLIDMIKMKALTMLRATYLVLDEADRMFDLG-----FEPQIRSIVGQI 401
Query: 71 -PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 129
P LFSAT+P VE+LAR I+ D VRV VG A+E I Q + S+ KL L
Sbjct: 402 RPDRQTLLFSATMPRKVEKLAREILTDPVRVTVGEVGMANEDITQVVQVIPSDAEKLPWL 461
Query: 130 RQSFAESL-NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ + VL+F K E+ +L ++ +H D Q
Sbjct: 462 LDKLPGMIDDGDVLVFASKKATVDEIESQLGQKGLKIAALHGDKDQ 507
>gi|346325267|gb|EGX94864.1| ATP-dependent RNA helicase DED1 [Cordyceps militaris CM01]
Length = 682
Score = 83.6 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 58/166 (34%), Positives = 88/166 (53%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 332 CDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPGVTD 390
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + D V + VGR + SE+I QK+ + + + LL +
Sbjct: 391 RQTLMFSATFPRDIQVLARDFLKDYVFLSVGRVGSTSENITQKVEYVEDVDKRSVLLDIL 450
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ A L LIFV++K A L L A IH D +Q +
Sbjct: 451 HTNAGGL---TLIFVETKRMADSLSDFLINQSFPATSIHGDRTQRE 493
>gi|440759128|ref|ZP_20938281.1| ATP-dependent RNA helicase RhlE [Pantoea agglomerans 299R]
gi|436427144|gb|ELP24828.1| ATP-dependent RNA helicase RhlE [Pantoea agglomerans 299R]
Length = 457
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 88/164 (53%), Gaps = 7/164 (4%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL ++ +DLS+VE LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDILVATPGRLLDLAQQNAVDLSQVEVLVLDEADRMLDMG----FIHDIRRVLARLP 178
Query: 73 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
R LFSAT D ++ LA ++ + + V R+NTASE + Q++ F + + L L
Sbjct: 179 AKRQNLLFSATFSDEIKGLAEKLLTNPEMIEVARRNTASEQVAQQVAFVDKKRKREL-LS 237
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
Q E VL+F ++K A L +L D I A IH + SQ
Sbjct: 238 QLIGEGNWQQVLVFTRTKHGANHLAEQLGKDGISAAAIHGNKSQ 281
>gi|147821303|emb|CAN74586.1| hypothetical protein VITISV_041989 [Vitis vinifera]
Length = 771
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 86/166 (51%), Gaps = 9/166 (5%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-- 70
K C+I+I+TP RL I+ K + + R YLVLDEAD++F++G +P +++
Sbjct: 347 KSGCEIVIATPGRLIDMIKMKALTMLRATYLVLDEADRMFDLG-----FEPQIRSIVGQI 401
Query: 71 -PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 129
P LFSAT+P VE+LAR I+ D VRV VG A+E I Q + S+ KL L
Sbjct: 402 RPDRQTLLFSATMPRKVEKLAREILTDPVRVTVGEVGMANEDITQVVQVIPSDAEKLPWL 461
Query: 130 RQSFAESL-NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ + VL+F K E+ +L ++ +H D Q
Sbjct: 462 LDKLPGMIDDGDVLVFASKKATVDEIESQLGQKGLKIAALHGDKDQ 507
>gi|336472551|gb|EGO60711.1| hypothetical protein NEUTE1DRAFT_76089 [Neurospora tetrasperma FGSC
2508]
gi|350294217|gb|EGZ75302.1| DEAD-domain-containing protein [Neurospora tetrasperma FGSC 2509]
Length = 693
Score = 83.6 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 89/166 (53%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 333 CDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPKVND 391
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + D + + VGR + SE+I QK+ + + + LL +
Sbjct: 392 RQTLMFSATFPRDIQILARDFLKDYIFLSVGRVGSTSENITQKVEYVEDIDKRSVLLDIL 451
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ A L LIFV++K A L L + A IH D +Q +
Sbjct: 452 HTHAGGL---TLIFVETKRMADSLSDFLINQNFPATSIHGDRTQRE 494
>gi|164426282|ref|XP_960926.2| hypothetical protein NCU01369 [Neurospora crassa OR74A]
gi|157071272|gb|EAA31690.2| hypothetical protein NCU01369 [Neurospora crassa OR74A]
Length = 584
Score = 83.6 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 89/166 (53%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 330 CDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPKVND 388
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + D + + VGR + SE+I QK+ + + + LL +
Sbjct: 389 RQTLMFSATFPRDIQILARDFLKDYIFLSVGRVGSTSENITQKVEYVEDIDKRSVLLDIL 448
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ A L LIFV++K A L L + A IH D +Q +
Sbjct: 449 HTHAGGL---TLIFVETKRMADSLSDFLINQNFPATSIHGDRTQRE 491
>gi|74625309|sp|Q9P6U9.1|DED1_NEUCR RecName: Full=ATP-dependent RNA helicase ded-1
gi|7635831|emb|CAB88635.1| probable ATP-dependent RNA helicase DED1 [Neurospora crassa]
Length = 688
Score = 83.6 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 89/166 (53%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 330 CDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPKVND 388
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + D + + VGR + SE+I QK+ + + + LL +
Sbjct: 389 RQTLMFSATFPRDIQILARDFLKDYIFLSVGRVGSTSENITQKVEYVEDIDKRSVLLDIL 448
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ A L LIFV++K A L L + A IH D +Q +
Sbjct: 449 HTHAGGL---TLIFVETKRMADSLSDFLINQNFPATSIHGDRTQRE 491
>gi|262041112|ref|ZP_06014330.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259041562|gb|EEW42615.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 519
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 86/164 (52%), Gaps = 7/164 (4%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + + L +VE LVLDEAD++ ++G I + + +
Sbjct: 191 RGGVDILVATPGRLLDLEHQNAVSLDKVEILVLDEADRMLDMG----FIHDIRRVLAKLP 246
Query: 73 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
R LFSAT D ++ LA ++H+ + V V R+NTASE I Q + F + L L
Sbjct: 247 ARRQNLLFSATFSDEIKGLAEKLLHNPLEVEVARRNTASEQITQHVHFVDKNRKREL-LS 305
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
Q E VL+F ++K A L +L D IR+ IH + SQ
Sbjct: 306 QLIGEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQ 349
>gi|387907207|ref|YP_006337543.1| ATP-dependent RNA helicase [Blattabacterium sp. (Blaberus
giganteus)]
gi|387582100|gb|AFJ90878.1| ATP-dependent RNA helicase [Blattabacterium sp. (Blaberus
giganteus)]
Length = 547
Score = 83.6 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 56/162 (34%), Positives = 91/162 (56%), Gaps = 8/162 (4%)
Query: 18 ILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS- 76
I++ TP R+ I+RKK+ + V+YLVLDEAD++ +G +D +++ P +S
Sbjct: 126 IIVGTPGRIIDLIKRKKLYFNEVQYLVLDEADEMLNMG-FKDELDYIIEKL--PKKKQSL 182
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
LFSAT+ ++ +A+ + D V ++VG+KN S+ +K + K LAL++
Sbjct: 183 LFSATMSRYMNAIAKKYLIDPVEIVVGKKNIGSDDVKHVYYIIENFSKKYLALKRIV--D 240
Query: 137 LNPPV--LIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+NP + +IF +K KE+ L D A +H DLSQTQ
Sbjct: 241 INPDIYGIIFCSTKKETKEIAEFLIKDSYNADALHGDLSQTQ 282
>gi|294947712|ref|XP_002785456.1| ATP-dependent RNA helicase ded-1, putative [Perkinsus marinus ATCC
50983]
gi|239899367|gb|EER17252.1| ATP-dependent RNA helicase ded-1, putative [Perkinsus marinus ATCC
50983]
Length = 695
Score = 83.6 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 55/164 (33%), Positives = 88/164 (53%), Gaps = 7/164 (4%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI-- 73
CDIL++TP RL + R ++ L +++ L+ DEAD++ ++G I +V+ PS
Sbjct: 340 CDILVATPGRLSDLMERFRVSLCQIKMLIFDEADRMLDMG-FEPQIRRIVEQEDMPSSRD 398
Query: 74 --VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
++FSAT P +++LAR + D + + VGR + SIKQ + + E KL L +
Sbjct: 399 GRQSAMFSATFPREIQQLARDFLKDYIYLTVGRVGSTHGSIKQIMRYV-DENSKLRDLYR 457
Query: 132 SFAESLNPPV-LIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
E + L+FV++K +A E+ L D A IH D SQ
Sbjct: 458 VLEEQTEEGLTLVFVETKRKADEIENMLRRDRYPATSIHGDRSQ 501
>gi|327275873|ref|XP_003222696.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Anolis
carolinensis]
Length = 924
Score = 83.6 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 55/161 (34%), Positives = 86/161 (53%), Gaps = 3/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
+I++ TP RL +++K +L RV YLV DEAD++F++G ++ V + P
Sbjct: 378 EIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDMG--FEYQVRSVASHVRPERQTL 435
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
LFSAT +E+LAR I+ D +RV+ G A+E I Q + S K L E
Sbjct: 436 LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDITQIVEIFASGPNKWNWLTSRLVEF 495
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + VL+FV K A+EL L + G++H D+ Q++
Sbjct: 496 TSSGSVLLFVTKKANAEELANNLKQEGHSLGLLHGDMDQSE 536
>gi|163789144|ref|ZP_02183587.1| putative RNA helicase dead-box protein [Flavobacteriales bacterium
ALC-1]
gi|159875557|gb|EDP69618.1| putative RNA helicase dead-box protein [Flavobacteriales bacterium
ALC-1]
Length = 638
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
K I+++TP R++ I RK +D+S+++Y VLDEAD++ +G D + + S
Sbjct: 120 KRGAQIIVATPGRMKDMISRKLVDISKIQYSVLDEADEMLNMGFYEDITDILSHTPDDKS 179
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
LFSAT+P V +A+ M+D + VG +N ++ ++ + + + + AL++
Sbjct: 180 TW--LFSATMPKEVSTIAKKFMYDPTEITVGNRNESTNNVSHEYYLVNARD-RYQALKR- 235
Query: 133 FAESLNPPV--LIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
NP + +IF ++K +++ L D AG +H DLSQ Q
Sbjct: 236 -LSDANPDIFSVIFCRTKRDTQKVAENLIEDGYSAGALHGDLSQNQ 280
>gi|367051843|ref|XP_003656300.1| hypothetical protein THITE_2146851 [Thielavia terrestris NRRL 8126]
gi|347003565|gb|AEO69964.1| hypothetical protein THITE_2146851 [Thielavia terrestris NRRL 8126]
Length = 761
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 97/187 (51%), Gaps = 31/187 (16%)
Query: 16 CDILISTPLRLRLAIRRKKID----LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP 71
DIL++TP L + K L V L+LDEAD L + K + +AC++P
Sbjct: 375 VDILVTTPKTLLNFLSGGKSGARKVLPTVRSLILDEADVLLDP-IFRKQTMGIWRACTHP 433
Query: 72 SIVRSLFSATLPDFVEELA------RSIMHDA-----VRVIVGRKNTASESIKQKLVFAG 120
+ + +SAT+ +E L RS D+ +R++VG K+TA ++ KL++
Sbjct: 434 DVALTCWSATMASNIEALVTKQLEKRSKRPDSSPRPLIRLVVGLKDTAVPNVTHKLIYTA 493
Query: 121 SEEGKLLALRQ-----SFAES---LNPPVLIFVQSKDRAKELYGELAFD-------DIRA 165
+E GKLLALRQ S A+S L PP L+F Q+ +RA+ L+ EL +D R
Sbjct: 494 TEAGKLLALRQLLHPVSSADSGPPLRPPFLVFTQTIERAQALHDELKYDIPLEAGGPARV 553
Query: 166 GVIHSDL 172
V+HS L
Sbjct: 554 AVLHSSL 560
>gi|333383648|ref|ZP_08475306.1| hypothetical protein HMPREF9455_03472 [Dysgonomonas gadei ATCC
BAA-286]
gi|332827587|gb|EGK00333.1| hypothetical protein HMPREF9455_03472 [Dysgonomonas gadei ATCC
BAA-286]
Length = 611
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 89/164 (54%), Gaps = 3/164 (1%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
K I+++TP RL I RK +DL ++Y+VLDEAD++ +G + ID ++ +
Sbjct: 120 KRGVQIIVATPGRLIDLINRKTVDLKNIKYVVLDEADEMLNMG-FTESIDEILSKVPDER 178
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
++ LFSAT+P + ++ + M + +GRKN S ++K +++ K LAL++
Sbjct: 179 VM-LLFSATMPKEIAKITKKYMQSPKEITIGRKNEGSNNVKHVYYMVHAKD-KYLALKRI 236
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
N +IF +++ +E+ +L D A +H DLSQ Q
Sbjct: 237 ADYYPNIYGIIFCRTRRETQEIADKLIQDGYNADSLHGDLSQAQ 280
>gi|254509500|ref|ZP_05121567.1| dead/deah box helicase domain protein [Rhodobacteraceae bacterium
KLH11]
gi|221533211|gb|EEE36199.1| dead/deah box helicase domain protein [Rhodobacteraceae bacterium
KLH11]
Length = 419
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 88/164 (53%), Gaps = 7/164 (4%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL + R +DLS V +LVLDEAD++ ++G + L+ I P +
Sbjct: 125 GTDILVATPGRLIDLMERGAVDLSSVRHLVLDEADQMLDMGFIHALRRIAPELGTPRQ-- 182
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
LFSAT+P +EEL+R+ + + RV V A++ I Q + F + K LR+
Sbjct: 183 --TMLFSATMPKQMEELSRAYLTNPQRVQVSPPGKAADKITQSIHFV-EKPAKPAKLREI 239
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ ++ L+F ++K A++L L D A IH + SQ Q
Sbjct: 240 LSADMDALTLVFSRTKHGAEKLMKGLVADGYNAASIHGNKSQGQ 283
>gi|390953013|ref|YP_006416771.1| DNA/RNA helicase [Aequorivita sublithincola DSM 14238]
gi|390418999|gb|AFL79756.1| DNA/RNA helicase, superfamily II [Aequorivita sublithincola DSM
14238]
Length = 616
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 94/168 (55%), Gaps = 11/168 (6%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
K ++++TP R++ I R ID+S++EY VLDEAD++ +G + + + S+
Sbjct: 120 KKGSQVIVATPGRMKDMIGRGLIDISKIEYCVLDEADEMLNMG----FYEDITEILSHSP 175
Query: 73 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
+S LFSAT+P V +A+ MH V + VG KN S+ + + + + + AL+
Sbjct: 176 KEKSTWLFSATMPKEVSTIAKKFMHTPVEITVGTKNVGSDQVSHEYYLVNARD-RYSALK 234
Query: 131 QSFAESLNPPV--LIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ A++ NP + +IF ++K +++ +L D A +H DLSQ+Q
Sbjct: 235 R-LADA-NPEIFSVIFCRTKRDTQKVAEQLIEDGYNAAALHGDLSQSQ 280
>gi|330009971|ref|ZP_08306668.1| ATP-dependent RNA helicase RhlE, partial [Klebsiella sp. MS 92-3]
gi|328534645|gb|EGF61216.1| ATP-dependent RNA helicase RhlE [Klebsiella sp. MS 92-3]
Length = 509
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 86/164 (52%), Gaps = 7/164 (4%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + + L +VE LVLDEAD++ ++G I + + +
Sbjct: 181 RGGVDILVATPGRLLDLEHQNAVSLDKVEILVLDEADRMLDMG----FIHDIRRVLAKLP 236
Query: 73 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
R LFSAT D ++ LA ++H+ + V V R+NTASE I Q + F + L L
Sbjct: 237 ARRQNLLFSATFSDEIKGLAEKLLHNPLEVEVARRNTASEQITQHVHFVDKNRKREL-LS 295
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
Q E VL+F ++K A L +L D IR+ IH + SQ
Sbjct: 296 QLIGEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQ 339
>gi|392978221|ref|YP_006476809.1| ATP-dependent RNA helicase RhlE [Enterobacter cloacae subsp.
dissolvens SDM]
gi|392324154|gb|AFM59107.1| ATP-dependent RNA helicase RhlE [Enterobacter cloacae subsp.
dissolvens SDM]
Length = 450
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 86/162 (53%), Gaps = 3/162 (1%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ D+L++TP RL + + L VE LVLDEAD++ ++G + H V A P
Sbjct: 123 RGGVDVLVATPGRLLDLEHQNAVKLDNVEILVLDEADRMLDMGFI--HDIRRVLAKLPPR 180
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
LFSAT D ++ LA ++H+ + V V R+NTASE + Q + F + + L L Q
Sbjct: 181 RQNLLFSATFSDEIKALAEKLLHNPLEVEVARRNTASEQVTQHVHFVDKKRKREL-LSQM 239
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ VL+F ++K A L +L D IR+ IH + SQ
Sbjct: 240 IGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQ 281
>gi|431931271|ref|YP_007244317.1| DNA/RNA helicase [Thioflavicoccus mobilis 8321]
gi|431829574|gb|AGA90687.1| DNA/RNA helicase, superfamily II [Thioflavicoccus mobilis 8321]
Length = 417
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 92/162 (56%), Gaps = 5/162 (3%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
DI+++TP RL + ++ +DLS +E LVLDEAD++ ++G + I V++ P+
Sbjct: 122 GVDIVVATPGRLLDHVGQRTLDLSGIEILVLDEADRMLDMG-FIHDIRRVLRLL--PTNR 178
Query: 75 RS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 133
+S LFSAT + +E+LA ++ D V + V R+NTA+E + Q LV ++E K L
Sbjct: 179 QSLLFSATYSNEIEQLANGLLRDPVTIAVARRNTAAEQVSQ-LVHPVAKERKRELLSHLI 237
Query: 134 AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
VL+F ++K A L +L D I A IH + SQ+
Sbjct: 238 HSQGWDQVLVFTRTKHGANRLTDQLVRDGIAAAAIHGNKSQS 279
>gi|209877927|ref|XP_002140405.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
gi|209556011|gb|EEA06056.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
Length = 680
Score = 83.2 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 56/171 (32%), Positives = 93/171 (54%), Gaps = 7/171 (4%)
Query: 10 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
DL + S DI+++TP RLR I R K+ L +++L+LDEAD++ ++G I +++
Sbjct: 327 DLDRGS-DIVVATPGRLRDLIDRGKVYLKLIKFLILDEADRMLDMG-FAPQIREIIEDSD 384
Query: 70 NPSIVRS----LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK 125
P + +FSAT P +++LA+ +H + + VGR S SI Q++V+A E+ K
Sbjct: 385 MPHSLEGRQTVMFSATFPREIQQLAKDFLHSYIFLTVGRVGATSGSIVQRVVYA-EEDHK 443
Query: 126 LLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L + E ++FV+ K RA ++ L + A IH D SQ +
Sbjct: 444 PRLLVKLLMEQGEGLTVVFVEMKRRADQIEDFLIDQNFPAVSIHGDRSQQE 494
>gi|423128237|ref|ZP_17115916.1| ATP-dependent RNA helicase rhlE [Klebsiella oxytoca 10-5250]
gi|376393593|gb|EHT06249.1| ATP-dependent RNA helicase rhlE [Klebsiella oxytoca 10-5250]
Length = 449
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 87/164 (53%), Gaps = 7/164 (4%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + + L +VE LVLDEAD++ ++G I + + +
Sbjct: 123 RSGVDILVATPGRLLDLEHQNAVSLDKVEVLVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 73 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
R LFSAT D ++ LA ++H+ + + V R+NTASE + Q + F + + L L
Sbjct: 179 AKRQNLLFSATFSDEIKSLAEKLLHNPLEIEVARRNTASEQVSQLVHFVDKKRKREL-LS 237
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
Q E VL+F ++K A L +L D IR+ IH + SQ
Sbjct: 238 QMIGEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQ 281
>gi|367024527|ref|XP_003661548.1| hypothetical protein MYCTH_2301066 [Myceliophthora thermophila ATCC
42464]
gi|347008816|gb|AEO56303.1| hypothetical protein MYCTH_2301066 [Myceliophthora thermophila ATCC
42464]
Length = 657
Score = 83.2 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 314 CDLLVATPGRLVDLIERGRISLVNIKYLVLDEADRMLDMG-FEPQIRRIVQGEDMPPTGQ 372
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LA+ ++D V + VGR + SE+I QK+ + + + LL +
Sbjct: 373 RQTLMFSATFPRDIQMLAQDFLNDYVFLSVGRVGSTSENITQKIEYVEDVDKRSVLLDIL 432
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ A L LIFV++K A L L + A IH D +Q +
Sbjct: 433 HTHAGGL---TLIFVETKRMADSLSDFLINQNFPATSIHGDRTQRE 475
>gi|163755350|ref|ZP_02162470.1| putative RNA helicase dead-box protein [Kordia algicida OT-1]
gi|161324770|gb|EDP96099.1| putative RNA helicase dead-box protein [Kordia algicida OT-1]
Length = 591
Score = 83.2 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 55/168 (32%), Positives = 96/168 (57%), Gaps = 11/168 (6%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
K I+++TP R++ I R+ +D+S++EY VLDEAD++ +G + + S+
Sbjct: 119 KKGAQIVVATPGRMQDMINRRMVDISKIEYCVLDEADEMLNMG----FYEDITSILSHTP 174
Query: 73 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
+S LFSAT+P V +A+ MH + VG +N+ S+S++ + +A S + LAL+
Sbjct: 175 DDKSTWLFSATMPREVATIAKKFMHTPQEITVGSRNSGSDSVRHEF-YAVSGRDRYLALK 233
Query: 131 QSFAESLNPPV--LIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ A++ NP + ++F ++K + + +L D A IH DLSQ Q
Sbjct: 234 R-LADA-NPDIFSVVFCRTKRDTQNVAEKLIEDGYNAAAIHGDLSQNQ 279
>gi|423113365|ref|ZP_17101056.1| ATP-dependent RNA helicase rhlE [Klebsiella oxytoca 10-5245]
gi|376388734|gb|EHT01427.1| ATP-dependent RNA helicase rhlE [Klebsiella oxytoca 10-5245]
Length = 454
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 87/164 (53%), Gaps = 7/164 (4%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + + L +VE LVLDEAD++ ++G I + + +
Sbjct: 123 RSGVDILVATPGRLLDLEHQNAVSLDKVEVLVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 73 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
R LFSAT D ++ LA ++H+ + + V R+NTASE + Q + F + + L L
Sbjct: 179 AKRQNLLFSATFSDDIKSLAEKLLHNPLEIEVARRNTASEQVSQLVHFVDKKRKREL-LS 237
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
Q E VL+F ++K A L +L D IR+ IH + SQ
Sbjct: 238 QMIGEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQ 281
>gi|392554770|ref|ZP_10301907.1| ATP-dependent RNA helicase [Pseudoalteromonas undina NCIMB 2128]
Length = 433
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 90/162 (55%), Gaps = 3/162 (1%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
K D++++TP RL IR + L++V++LVLDEAD++ ++G + + V+K+C++
Sbjct: 121 KEGVDVVVATPGRLLDHIRLGNLSLAQVKHLVLDEADRMLDMG-FINDMQSVIKSCADER 179
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ LFSAT P +++ A ++ V V + N+ + ++ Q +V+ E K L +
Sbjct: 180 QIL-LFSATFPAAIKQFASKVLKQPEIVRVDQTNSTASTV-QHVVYPVEERRKQELLSEL 237
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ VL+FV K+ A EL EL D I A V H D SQ
Sbjct: 238 IGKKNWQQVLVFVNMKETADELVTELNLDGIPAAVCHGDKSQ 279
>gi|148702332|gb|EDL34279.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42, isoform CRA_a [Mus
musculus]
Length = 927
Score = 83.2 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 54/167 (32%), Positives = 88/167 (52%), Gaps = 15/167 (8%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG------NLLKHIDPVVKACSN 70
+I++ TP RL +++K +L RV YLV DEAD++F++G ++ H+ P +
Sbjct: 376 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTL-- 433
Query: 71 PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L
Sbjct: 434 ------LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLT 487
Query: 131 QSFAE-SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ E + + VL+FV K A+EL L + G++H D+ Q++
Sbjct: 488 RRLVEFTSSGSVLLFVTKKANAEELASNLKQEGHNLGLLHGDMDQSE 534
>gi|74152734|dbj|BAE42635.1| unnamed protein product [Mus musculus]
Length = 929
Score = 83.2 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 54/167 (32%), Positives = 88/167 (52%), Gaps = 15/167 (8%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG------NLLKHIDPVVKACSN 70
+I++ TP RL +++K +L RV YLV DEAD++F++G ++ H+ P +
Sbjct: 378 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTL-- 435
Query: 71 PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L
Sbjct: 436 ------LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLT 489
Query: 131 QSFAE-SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ E + + VL+FV K A+EL L + G++H D+ Q++
Sbjct: 490 RRLVEFTSSGSVLLFVTKKANAEELASNLKQEGHNLGLLHGDMDQSE 536
>gi|423119382|ref|ZP_17107066.1| ATP-dependent RNA helicase rhlE [Klebsiella oxytoca 10-5246]
gi|376398561|gb|EHT11185.1| ATP-dependent RNA helicase rhlE [Klebsiella oxytoca 10-5246]
Length = 466
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 90/163 (55%), Gaps = 5/163 (3%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ D+L++TP RL + + L +VE LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RSGVDVLVATPGRLLDLEHQNAVSLDKVEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 73 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
++L FSAT D ++ LA ++H+ + + V R+NTASE + Q + F + + L L Q
Sbjct: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASEQVTQHVHFVDKKRKREL-LSQ 238
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
E VL+F ++K A L +L D IR+ IH + SQ
Sbjct: 239 MIGEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQ 281
>gi|148702333|gb|EDL34280.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42, isoform CRA_b [Mus
musculus]
Length = 1012
Score = 83.2 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 54/167 (32%), Positives = 88/167 (52%), Gaps = 15/167 (8%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG------NLLKHIDPVVKACSN 70
+I++ TP RL +++K +L RV YLV DEAD++F++G ++ H+ P +
Sbjct: 461 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTL-- 518
Query: 71 PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L
Sbjct: 519 ------LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLT 572
Query: 131 QSFAE-SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ E + + VL+FV K A+EL L + G++H D+ Q++
Sbjct: 573 RRLVEFTSSGSVLLFVTKKANAEELASNLKQEGHNLGLLHGDMDQSE 619
>gi|67528815|ref|XP_662070.1| hypothetical protein AN4466.2 [Aspergillus nidulans FGSC A4]
gi|40741041|gb|EAA60231.1| hypothetical protein AN4466.2 [Aspergillus nidulans FGSC A4]
Length = 1526
Score = 83.2 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 54/164 (32%), Positives = 85/164 (51%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YL+LDEAD++ ++G I +V+ P++
Sbjct: 322 CDLLVATPGRLVDLIERGRISLVNIKYLILDEADRMLDMG-FEPQIRRIVEGEDMPNVND 380
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + D V + VGR + SE+I QK+ + + + + L
Sbjct: 381 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVEDHDKRSVLLDIL 440
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
LIFV++K A L L A IH D +Q +
Sbjct: 441 HTHGTTGLTLIFVETKRMADALSEFLINQRFPATAIHGDRTQRE 484
>gi|420241874|ref|ZP_14745969.1| DNA/RNA helicase, superfamily II [Rhizobium sp. CF080]
gi|398069204|gb|EJL60573.1| DNA/RNA helicase, superfamily II [Rhizobium sp. CF080]
Length = 579
Score = 83.2 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 54/162 (33%), Positives = 89/162 (54%), Gaps = 6/162 (3%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKACSNPSIV 74
DIL++TP RL I R+ I L+ V YLVLDEAD++ ++G + L+ I +V A
Sbjct: 127 DILVATPGRLLDLISRRAIGLTTVRYLVLDEADQMLDLGFIHDLRKISKMVPAKRQTL-- 184
Query: 75 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
LFSAT+P + +LA + D V+V V A++ ++Q + F + K L++S
Sbjct: 185 --LFSATMPKAIADLASDFLKDPVQVSVTPPGKAADKVEQFVHFVAGKNDKTDLLKKSLE 242
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E+ + ++F+++K A++L L + IH + SQ Q
Sbjct: 243 ENPDGRAMVFLRTKHGAEKLSKHLEHIGFKVASIHGNKSQGQ 284
>gi|320166262|gb|EFW43161.1| ATP dependent RNA helicase [Capsaspora owczarzaki ATCC 30864]
Length = 633
Score = 83.2 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 54/164 (32%), Positives = 84/164 (51%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
C +L++TP RL + R KI L Y+VLDEAD++ ++G I +V+ P++
Sbjct: 308 CQLLVATPGRLMDLLERGKISLDNCRYVVLDEADRMLDMG-FEPQIREIVEKNDLPAMGE 366
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + D + + VGR + SE+I QKL++ + + + L
Sbjct: 367 RQMLMFSATFPKEIQALARDFLEDYLFLAVGRVGSTSENITQKLIWVDEHDKRSMLLDLL 426
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
A L FV++K A L L + A IH D SQ +
Sbjct: 427 SAAGPECLTLCFVETKRAADSLEDFLYHEGFPAASIHGDRSQRE 470
>gi|294889264|ref|XP_002772733.1| ATP-dependent RNA helicase DED1, putative [Perkinsus marinus ATCC
50983]
gi|239877266|gb|EER04549.1| ATP-dependent RNA helicase DED1, putative [Perkinsus marinus ATCC
50983]
Length = 622
Score = 83.2 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 55/164 (33%), Positives = 88/164 (53%), Gaps = 7/164 (4%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI-- 73
CDIL++TP RL + R ++ L +++ L+ DEAD++ ++G I +V+ PS
Sbjct: 340 CDILVATPGRLSDLMERFRVSLCQIKMLIFDEADRMLDMG-FEPQIRRIVEQEDMPSSRD 398
Query: 74 --VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
++FSAT P +++LAR + D + + VGR + SIKQ + + E KL L +
Sbjct: 399 GRQSAMFSATFPREIQQLARDFLKDYIYLTVGRVGSTHGSIKQIMRYV-DENSKLRDLYR 457
Query: 132 SFAESLNPPV-LIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
E + L+FV++K +A E+ L D A IH D SQ
Sbjct: 458 VLEEQTEEGLTLVFVETKRKADEIENMLRRDRYPATSIHGDRSQ 501
>gi|431908881|gb|ELK12473.1| ATP-dependent RNA helicase DDX42 [Pteropus alecto]
Length = 927
Score = 83.2 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 54/167 (32%), Positives = 88/167 (52%), Gaps = 15/167 (8%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG------NLLKHIDPVVKACSN 70
+I++ TP RL +++K +L RV YLV DEAD++F++G ++ H+ P +
Sbjct: 369 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTL-- 426
Query: 71 PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L
Sbjct: 427 ------LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLT 480
Query: 131 QSFAE-SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ E + + VL+FV K A+EL L + G++H D+ Q++
Sbjct: 481 RRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSE 527
>gi|355683293|gb|AER97078.1| DEAD box polypeptide 42 [Mustela putorius furo]
Length = 584
Score = 82.8 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 54/167 (32%), Positives = 88/167 (52%), Gaps = 15/167 (8%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG------NLLKHIDPVVKACSN 70
+I++ TP RL +++K +L RV YLV DEAD++F++G ++ H+ P +
Sbjct: 24 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTL-- 81
Query: 71 PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L
Sbjct: 82 ------LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLT 135
Query: 131 QSFAE-SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ E + + VL+FV K A+EL L + G++H D+ Q++
Sbjct: 136 RRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSE 182
>gi|351704433|gb|EHB07352.1| ATP-dependent RNA helicase DDX42 [Heterocephalus glaber]
Length = 935
Score = 82.8 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 54/167 (32%), Positives = 88/167 (52%), Gaps = 15/167 (8%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG------NLLKHIDPVVKACSN 70
+I++ TP RL +++K +L RV YLV DEAD++F++G ++ H+ P +
Sbjct: 379 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTL-- 436
Query: 71 PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L
Sbjct: 437 ------LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLT 490
Query: 131 QSFAE-SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ E + + VL+FV K A+EL L + G++H D+ Q++
Sbjct: 491 RRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSE 537
>gi|294888665|ref|XP_002772561.1| ATP-dependent RNA helicase rok1, putative [Perkinsus marinus ATCC
50983]
gi|239876829|gb|EER04377.1| ATP-dependent RNA helicase rok1, putative [Perkinsus marinus ATCC
50983]
Length = 239
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Query: 99 RVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSKDRAKELYGE 157
RV VG++ +A++ ++Q+L+F G+EEGKL+ALR+ A + PP L FVQSK RA+EL E
Sbjct: 10 RVWVGQQGSAAKDVQQRLLFCGNEEGKLVALRRMIANGEVKPPCLAFVQSKARAQELTKE 69
Query: 158 LAFDDIRAGVIHSDLSQTQ 176
L FD + IHSD+S+ Q
Sbjct: 70 LMFDGVFVACIHSDMSRKQ 88
>gi|193785182|dbj|BAG54335.1| unnamed protein product [Homo sapiens]
Length = 674
Score = 82.8 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 54/167 (32%), Positives = 88/167 (52%), Gaps = 15/167 (8%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG------NLLKHIDPVVKACSN 70
+I++ TP RL +++K +L RV YLV DEAD++F++G ++ H+ P +
Sbjct: 114 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTL-- 171
Query: 71 PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L
Sbjct: 172 ------LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLT 225
Query: 131 QSFAE-SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ E + + VL+FV K A+EL L + G++H D+ Q++
Sbjct: 226 RRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSE 272
>gi|193788232|dbj|BAG53126.1| unnamed protein product [Homo sapiens]
Length = 625
Score = 82.8 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 54/167 (32%), Positives = 88/167 (52%), Gaps = 15/167 (8%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG------NLLKHIDPVVKACSN 70
+I++ TP RL +++K +L RV YLV DEAD++F++G ++ H+ P +
Sbjct: 114 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTL-- 171
Query: 71 PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L
Sbjct: 172 ------LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLT 225
Query: 131 QSFAE-SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ E + + VL+FV K A+EL L + G++H D+ Q++
Sbjct: 226 RRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSE 272
>gi|423107485|ref|ZP_17095180.1| ATP-dependent RNA helicase rhlE [Klebsiella oxytoca 10-5243]
gi|376388510|gb|EHT01205.1| ATP-dependent RNA helicase rhlE [Klebsiella oxytoca 10-5243]
Length = 454
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 87/164 (53%), Gaps = 7/164 (4%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + + L +VE LVLDEAD++ ++G I + + +
Sbjct: 123 RSGVDILVATPGRLLDLEHQNAVSLDKVEVLVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 73 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
R LFSAT D ++ LA ++H+ + + V R+NTASE + Q + F + + L L
Sbjct: 179 AKRQNLLFSATFSDDIKSLAEKLLHNPLEIEVARRNTASEQVSQLVHFVDKKRKREL-LS 237
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
Q E VL+F ++K A L +L D IR+ IH + SQ
Sbjct: 238 QMIGEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQ 281
>gi|389631843|ref|XP_003713574.1| ATP-dependent RNA helicase ROK1 [Magnaporthe oryzae 70-15]
gi|152060504|sp|A4RMV8.1|ROK1_MAGO7 RecName: Full=ATP-dependent RNA helicase ROK1
gi|351645907|gb|EHA53767.1| ATP-dependent RNA helicase ROK1 [Magnaporthe oryzae 70-15]
gi|440467845|gb|ELQ37039.1| ATP-dependent RNA helicase ROK1 [Magnaporthe oryzae Y34]
gi|440478590|gb|ELQ59409.1| ATP-dependent RNA helicase ROK1 [Magnaporthe oryzae P131]
Length = 775
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 99/198 (50%), Gaps = 40/198 (20%)
Query: 16 CDILISTPLRL----RLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLK-HIDPVVKACSN 70
DIL++TP+ L K L RV L+LDEAD L + L + + AC N
Sbjct: 398 ADILVTTPMLLLNFLSKGTSTTKKRLPRVRSLILDEADVLLD--QLFREQTMGIWSACRN 455
Query: 71 PSIVRSLFSATLPDFVE----ELARSIMHDA-----VRVIVGRKNTASESIKQKLVFAGS 121
P++ S +SAT+ +E + R+ DA +R++VG K+TA +I +LV+ +
Sbjct: 456 PNLRVSFWSATMASNIETHILDNLRAQADDAPAPPLIRLVVGLKDTAVPNISHRLVYTAT 515
Query: 122 EEGKLLALRQ-----SFAE------------SLNPPVLIFVQSKDRAKELYGELAFD--- 161
E GKLLALRQ SF+ L PP L+FVQ+ +RA L+ EL +D
Sbjct: 516 ESGKLLALRQLLHPASFSTTTSSTTTPEDETPLRPPFLVFVQTIERATALHEELKYDIPA 575
Query: 162 ----DIRAGVIHSDLSQT 175
R V+HS + ++
Sbjct: 576 AAGGASRVAVLHSSMPES 593
>gi|157838001|ref|NP_082350.3| ATP-dependent RNA helicase DDX42 [Mus musculus]
gi|123796460|sp|Q810A7.3|DDX42_MOUSE RecName: Full=ATP-dependent RNA helicase DDX42; AltName: Full=DEAD
box protein 42
gi|74146847|dbj|BAE41388.1| unnamed protein product [Mus musculus]
Length = 929
Score = 82.8 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 54/167 (32%), Positives = 88/167 (52%), Gaps = 15/167 (8%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG------NLLKHIDPVVKACSN 70
+I++ TP RL +++K +L RV YLV DEAD++F++G ++ H+ P +
Sbjct: 378 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTL-- 435
Query: 71 PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L
Sbjct: 436 ------LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLT 489
Query: 131 QSFAE-SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ E + + VL+FV K A+EL L + G++H D+ Q++
Sbjct: 490 RRLVEFTSSGSVLLFVTKKANAEELASNLKQEGHNLGLLHGDMDQSE 536
>gi|375259807|ref|YP_005018977.1| ATP-dependent RNA helicase RhlE [Klebsiella oxytoca KCTC 1686]
gi|397656870|ref|YP_006497572.1| ATP-dependent RNA helicase RhlE [Klebsiella oxytoca E718]
gi|402843597|ref|ZP_10891991.1| ATP-dependent RNA helicase RhlE [Klebsiella sp. OBRC7]
gi|423102058|ref|ZP_17089760.1| ATP-dependent RNA helicase rhlE [Klebsiella oxytoca 10-5242]
gi|365909285|gb|AEX04738.1| ATP-dependent RNA helicase RhlE [Klebsiella oxytoca KCTC 1686]
gi|376389954|gb|EHT02641.1| ATP-dependent RNA helicase rhlE [Klebsiella oxytoca 10-5242]
gi|394345401|gb|AFN31522.1| ATP-dependent RNA helicase RhlE [Klebsiella oxytoca E718]
gi|402276707|gb|EJU25808.1| ATP-dependent RNA helicase RhlE [Klebsiella sp. OBRC7]
Length = 449
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 87/164 (53%), Gaps = 7/164 (4%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + + L +VE LVLDEAD++ ++G I + + +
Sbjct: 123 RSGVDILVATPGRLLDLEHQNAVSLDKVEVLVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 73 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
R LFSAT D ++ LA ++H+ + + V R+NTASE + Q + F + + L L
Sbjct: 179 ARRQNLLFSATFSDDIKSLAEKLLHNPLEIEVARRNTASEQVSQLVHFVDKKRKREL-LS 237
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
Q E VL+F ++K A L +L D IR+ IH + SQ
Sbjct: 238 QMIGEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQ 281
>gi|90414211|ref|ZP_01222192.1| putative ATP-dependent RNA helicase [Photobacterium profundum 3TCK]
gi|90324761|gb|EAS41299.1| putative ATP-dependent RNA helicase [Photobacterium profundum 3TCK]
Length = 431
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 89/161 (55%), Gaps = 3/161 (1%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
DIL++TP RL + K + L+ +E+LV DEAD++ ++G + + + SNP I+
Sbjct: 124 GVDILVATPGRLIEHVDLKNVSLTNIEFLVFDEADRMLDMGFITDMRKVMGEVNSNPQIM 183
Query: 75 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
+FSAT + LA I+ R++V R+NT ++++ +V+ +E K L +
Sbjct: 184 --MFSATSSKQMNALASDILRKPKRIMVDRENTTADTVAH-VVYPVDQERKRELLSELIG 240
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
+ VL+FV K+ A EL EL D I+A + H D +Q+
Sbjct: 241 KKNWKQVLVFVNYKETANELVKELKKDGIKAVLCHGDKAQS 281
>gi|26340024|dbj|BAC33675.1| unnamed protein product [Mus musculus]
Length = 810
Score = 82.8 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 3/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
+I++ TP RL +++K +L RV YLV DEAD++F++G ++ + + P
Sbjct: 259 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 316
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L + E
Sbjct: 317 LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEF 376
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + VL+FV K A+EL L + G++H D+ Q++
Sbjct: 377 TSSGSVLLFVTKKANAEELASNLKQEGHNLGLLHGDMDQSE 417
>gi|407776571|ref|ZP_11123844.1| DEAD/DEAH box helicase [Nitratireductor pacificus pht-3B]
gi|407301862|gb|EKF20981.1| DEAD/DEAH box helicase [Nitratireductor pacificus pht-3B]
Length = 456
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 93/161 (57%), Gaps = 3/161 (1%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
D++I+TP RL +R ++ L+ +LVLDEAD++ ++G + + + +A ++
Sbjct: 133 GVDVVIATPGRLTDLVRSGELSLAETRWLVLDEADRMLDMG-FINDVRRIARA-THADRQ 190
Query: 75 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
+LFSAT+P +E+LA S++ + VRV V +++T + I Q+LV A +++ K L A
Sbjct: 191 TALFSATMPREIEQLAASLLKEPVRVEVAKQSTTAVEITQRLVMARTKQ-KRKVLSDMLA 249
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
+ V++F ++K A + +L D A VIH + SQ
Sbjct: 250 DETMRSVIVFARTKHGADRVTRDLERDGFEAAVIHGNKSQN 290
>gi|357403915|ref|YP_004915839.1| ATP-dependent RNA helicase [Methylomicrobium alcaliphilum 20Z]
gi|351716580|emb|CCE22240.1| ATP-dependent RNA helicase [Methylomicrobium alcaliphilum 20Z]
Length = 425
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 91/161 (56%), Gaps = 5/161 (3%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
CDI+++TP RL R+ +DL RVE LVLDEAD++ ++G + +D ++ P +
Sbjct: 123 GCDIVVATPGRLLDHARQGNVDLGRVEILVLDEADRMLDMG-FKREVDAILALL--PRLR 179
Query: 75 RS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 133
++ LFSAT + ++ LA ++HD + + R+ +++++Q+ ++ E K L
Sbjct: 180 QNLLFSATFSNEIKTLAGRLLHDPIAIEAPRQTIDADTVEQR-IYPIKREYKRELLSYLI 238
Query: 134 AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
VL+FV+++ A L +L D IR GV+H D SQ
Sbjct: 239 GSGNWRQVLVFVRTRHGADRLAEQLIKDGIRTGVLHGDKSQ 279
>gi|237747736|ref|ZP_04578216.1| ATP-dependent RNA helicase [Oxalobacter formigenes OXCC13]
gi|229379098|gb|EEO29189.1| ATP-dependent RNA helicase [Oxalobacter formigenes OXCC13]
Length = 469
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 94/171 (54%), Gaps = 9/171 (5%)
Query: 9 TDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG---NLLKHIDPVV 65
T + + +ILI+TP RL +++K ++LS + LVLDEAD++ ++G +L + ++ +
Sbjct: 135 TSILRAGVEILIATPGRLLDHVQQKNVNLSHTQILVLDEADRMLDMGFLPDLQRIVNLLP 194
Query: 66 KACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK 125
K N LFSAT + +++LARS M D V V V R+N +E++KQ V+ E K
Sbjct: 195 KQRQN-----LLFSATFSNDIKKLARSFMKDPVTVEVARQNATAENVKQ-TVYRIEESEK 248
Query: 126 LLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
A+ + VLIF +K A L +L ++A IH D +Q +
Sbjct: 249 NAAVEHLLKDRNQEQVLIFSNTKAGASRLARQLERKGMKASAIHGDKTQAE 299
>gi|133777033|gb|AAH43036.4| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Mus musculus]
Length = 810
Score = 82.8 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 3/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
+I++ TP RL +++K +L RV YLV DEAD++F++G ++ + + P
Sbjct: 259 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 316
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L + E
Sbjct: 317 LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEF 376
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + VL+FV K A+EL L + G++H D+ Q++
Sbjct: 377 TSSGSVLLFVTKKANAEELASNLKQEGHNLGLLHGDMDQSE 417
>gi|354479437|ref|XP_003501916.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Cricetulus griseus]
gi|344243071|gb|EGV99174.1| ATP-dependent RNA helicase DDX42 [Cricetulus griseus]
Length = 928
Score = 82.8 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 54/167 (32%), Positives = 88/167 (52%), Gaps = 15/167 (8%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG------NLLKHIDPVVKACSN 70
+I++ TP RL +++K +L RV YLV DEAD++F++G ++ H+ P +
Sbjct: 377 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTL-- 434
Query: 71 PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L
Sbjct: 435 ------LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLT 488
Query: 131 QSFAE-SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ E + + VL+FV K A+EL L + G++H D+ Q++
Sbjct: 489 RRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSE 535
>gi|410981498|ref|XP_003997105.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Felis catus]
Length = 934
Score = 82.8 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 3/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
+I++ TP RL +++K +L RV YLV DEAD++F++G ++ + + P
Sbjct: 378 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 435
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L + E
Sbjct: 436 LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEF 495
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + VL+FV K A+EL L + G++H D+ Q++
Sbjct: 496 TSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSE 536
>gi|260428461|ref|ZP_05782440.1| putative ATP-dependent RNA helicase RhlE [Citreicella sp. SE45]
gi|260422953|gb|EEX16204.1| putative ATP-dependent RNA helicase RhlE [Citreicella sp. SE45]
Length = 430
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 88/164 (53%), Gaps = 7/164 (4%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL + RK +DLS+ LVLDEAD++ ++G + L+ I P +
Sbjct: 125 GTDILVATPGRLIDLMDRKSVDLSQTRQLVLDEADQMLDLGFIHALRKIAPKLGTPRQ-- 182
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
LFSAT+P +EEL+ + + + RV V A++ I Q + F G ++ K LR+
Sbjct: 183 --TMLFSATMPKQMEELSAAYLTNPRRVQVSPPGKAADKITQSVHFLGKDD-KPRKLREV 239
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L+ L+F ++K A+ L L D A IH + SQ Q
Sbjct: 240 LRQDLDALTLVFSRTKHGAERLMKGLVADGFNAASIHGNKSQGQ 283
>gi|189193873|ref|XP_001933275.1| ATP-dependent RNA helicase DED1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187978839|gb|EDU45465.1| ATP-dependent RNA helicase DED1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 686
Score = 82.8 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 56/166 (33%), Positives = 88/166 (53%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L+ ++YLVLDEAD++ ++G I +V+ P
Sbjct: 331 CDLLVATPGRLVDLIERGRISLASIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPPTAG 389
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + D + + VGR + SE+I QK+ + + + LL +
Sbjct: 390 RQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGSTSENITQKIEYVEDVDKRSVLLDIL 449
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L+ LIFV++K A L L A IH D +Q +
Sbjct: 450 HTHGAGLS---LIFVETKRMADSLSDFLINQGFPATSIHGDRTQRE 492
>gi|119614682|gb|EAW94276.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42, isoform CRA_a [Homo
sapiens]
Length = 828
Score = 82.8 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 3/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
+I++ TP RL +++K +L RV YLV DEAD++F++G ++ + + P
Sbjct: 268 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 325
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L + E
Sbjct: 326 LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEF 385
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + VL+FV K A+EL L + G++H D+ Q++
Sbjct: 386 TSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSE 426
>gi|426347141|ref|XP_004041217.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 1 [Gorilla
gorilla gorilla]
gi|426347143|ref|XP_004041218.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 2 [Gorilla
gorilla gorilla]
Length = 938
Score = 82.8 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 3/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
+I++ TP RL +++K +L RV YLV DEAD++F++G ++ + + P
Sbjct: 378 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 435
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L + E
Sbjct: 436 LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEF 495
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + VL+FV K A+EL L + G++H D+ Q++
Sbjct: 496 TSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSE 536
>gi|75061727|sp|Q5R7D1.1|DDX42_PONAB RecName: Full=ATP-dependent RNA helicase DDX42; AltName: Full=DEAD
box protein 42
gi|55731230|emb|CAH92329.1| hypothetical protein [Pongo abelii]
Length = 942
Score = 82.8 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 3/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
+I++ TP RL +++K +L RV YLV DEAD++F++G ++ + + P
Sbjct: 378 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 435
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L + E
Sbjct: 436 LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEF 495
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + VL+FV K A+EL L + G++H D+ Q++
Sbjct: 496 TSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSE 536
>gi|402900734|ref|XP_003913323.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 1 [Papio
anubis]
gi|402900736|ref|XP_003913324.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 2 [Papio
anubis]
Length = 937
Score = 82.8 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 54/167 (32%), Positives = 88/167 (52%), Gaps = 15/167 (8%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG------NLLKHIDPVVKACSN 70
+I++ TP RL +++K +L RV YLV DEAD++F++G ++ H+ P +
Sbjct: 378 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTL-- 435
Query: 71 PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L
Sbjct: 436 ------LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLT 489
Query: 131 QSFAE-SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ E + + VL+FV K A+EL L + G++H D+ Q++
Sbjct: 490 RRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSE 536
>gi|344285247|ref|XP_003414374.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Loxodonta africana]
Length = 934
Score = 82.8 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 3/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
+I++ TP RL +++K +L RV YLV DEAD++F++G ++ + + P
Sbjct: 378 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 435
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L + E
Sbjct: 436 LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEF 495
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + VL+FV K A+EL L + G++H D+ Q++
Sbjct: 496 TSSGSVLLFVTKKANAEELASNLKQEGHNLGLLHGDMDQSE 536
>gi|332243110|ref|XP_003270725.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Nomascus leucogenys]
Length = 938
Score = 82.8 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 3/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
+I++ TP RL +++K +L RV YLV DEAD++F++G ++ + + P
Sbjct: 378 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 435
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L + E
Sbjct: 436 LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEF 495
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + VL+FV K A+EL L + G++H D+ Q++
Sbjct: 496 TSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSE 536
>gi|206725493|ref|NP_001126368.1| ATP-dependent RNA helicase DDX42 [Pongo abelii]
Length = 942
Score = 82.8 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 3/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
+I++ TP RL +++K +L RV YLV DEAD++F++G ++ + + P
Sbjct: 378 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 435
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L + E
Sbjct: 436 LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEF 495
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + VL+FV K A+EL L + G++H D+ Q++
Sbjct: 496 TSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSE 536
>gi|114669830|ref|XP_001147818.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 7 [Pan
troglodytes]
gi|114669832|ref|XP_001147880.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 8 [Pan
troglodytes]
gi|397480220|ref|XP_003811385.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 1 [Pan
paniscus]
gi|397480222|ref|XP_003811386.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 2 [Pan
paniscus]
gi|410223570|gb|JAA09004.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Pan troglodytes]
gi|410223572|gb|JAA09005.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Pan troglodytes]
gi|410254498|gb|JAA15216.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Pan troglodytes]
gi|410294570|gb|JAA25885.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Pan troglodytes]
gi|410294572|gb|JAA25886.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Pan troglodytes]
gi|410338913|gb|JAA38403.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Pan troglodytes]
gi|410338915|gb|JAA38404.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Pan troglodytes]
Length = 938
Score = 82.8 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 3/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
+I++ TP RL +++K +L RV YLV DEAD++F++G ++ + + P
Sbjct: 378 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 435
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L + E
Sbjct: 436 LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEF 495
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + VL+FV K A+EL L + G++H D+ Q++
Sbjct: 496 TSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSE 536
>gi|387763217|ref|NP_001248484.1| ATP-dependent RNA helicase DDX42 [Macaca mulatta]
gi|355568823|gb|EHH25104.1| hypothetical protein EGK_08866 [Macaca mulatta]
gi|355754284|gb|EHH58249.1| hypothetical protein EGM_08053 [Macaca fascicularis]
gi|380809324|gb|AFE76537.1| ATP-dependent RNA helicase DDX42 [Macaca mulatta]
gi|383415577|gb|AFH31002.1| ATP-dependent RNA helicase DDX42 [Macaca mulatta]
gi|384945118|gb|AFI36164.1| ATP-dependent RNA helicase DDX42 [Macaca mulatta]
Length = 937
Score = 82.8 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 54/167 (32%), Positives = 88/167 (52%), Gaps = 15/167 (8%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG------NLLKHIDPVVKACSN 70
+I++ TP RL +++K +L RV YLV DEAD++F++G ++ H+ P +
Sbjct: 378 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTL-- 435
Query: 71 PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L
Sbjct: 436 ------LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLT 489
Query: 131 QSFAE-SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ E + + VL+FV K A+EL L + G++H D+ Q++
Sbjct: 490 RRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSE 536
>gi|417405318|gb|JAA49373.1| Putative rna helicase [Desmodus rotundus]
Length = 933
Score = 82.8 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 3/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
+I++ TP RL +++K +L RV YLV DEAD++F++G ++ + + P
Sbjct: 378 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 435
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L + E
Sbjct: 436 LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEF 495
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + VL+FV K A+EL L + G++H D+ Q++
Sbjct: 496 TSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSE 536
>gi|403303756|ref|XP_003942489.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403303758|ref|XP_003942490.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 933
Score = 82.8 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 3/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
+I++ TP RL +++K +L RV YLV DEAD++F++G ++ + + P
Sbjct: 378 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 435
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L + E
Sbjct: 436 LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEF 495
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + VL+FV K A+EL L + G++H D+ Q++
Sbjct: 496 TSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSE 536
>gi|395826079|ref|XP_003786247.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Otolemur garnettii]
Length = 936
Score = 82.8 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 3/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
+I++ TP RL +++K +L RV YLV DEAD++F++G ++ + + P
Sbjct: 378 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 435
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L + E
Sbjct: 436 LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEF 495
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + VL+FV K A+EL L + G++H D+ Q++
Sbjct: 496 TSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSE 536
>gi|345804940|ref|XP_537598.3| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX42
isoform 1 [Canis lupus familiaris]
Length = 934
Score = 82.8 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 3/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
+I++ TP RL +++K +L RV YLV DEAD++F++G ++ + + P
Sbjct: 378 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 435
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L + E
Sbjct: 436 LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEF 495
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + VL+FV K A+EL L + G++H D+ Q++
Sbjct: 496 TSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSE 536
>gi|336173170|ref|YP_004580308.1| DEAD/DEAH box helicase [Lacinutrix sp. 5H-3-7-4]
gi|334727742|gb|AEH01880.1| DEAD/DEAH box helicase domain protein [Lacinutrix sp. 5H-3-7-4]
Length = 622
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 93/166 (56%), Gaps = 7/166 (4%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
K I+++TP R++ I RK +D+++++Y VLDEAD++ +G D + + S
Sbjct: 120 KRGAQIIVATPGRMKDMISRKLVDITKIQYSVLDEADEMLNMGFKEDITDILSGTPKDKS 179
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
LFSAT+P V +A+ MH+ + VG KN ++ ++ + + + + AL++
Sbjct: 180 TW--LFSATMPKEVARIAKDFMHEPQEITVGHKNESTSNVSHEYYLVNARD-RYQALKR- 235
Query: 133 FAESLNPPV--LIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
A++ NP + +IF ++K +++ +L D AG +H DLSQ Q
Sbjct: 236 LADA-NPDIFSVIFCRTKRDTQKVAEQLIEDGYSAGALHGDLSQNQ 280
>gi|291406357|ref|XP_002719521.1| PREDICTED: DEAD box polypeptide 42 protein [Oryctolagus cuniculus]
Length = 935
Score = 82.8 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 3/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
+I++ TP RL +++K +L RV YLV DEAD++F++G ++ + + P
Sbjct: 378 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 435
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L + E
Sbjct: 436 LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEF 495
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + VL+FV K A+EL L + G++H D+ Q++
Sbjct: 496 TSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSE 536
>gi|119614684|gb|EAW94278.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42, isoform CRA_c [Homo
sapiens]
Length = 936
Score = 82.8 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 3/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
+I++ TP RL +++K +L RV YLV DEAD++F++G ++ + + P
Sbjct: 376 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 433
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L + E
Sbjct: 434 LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEF 493
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + VL+FV K A+EL L + G++H D+ Q++
Sbjct: 494 TSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSE 534
>gi|157817897|ref|NP_001100529.1| ATP-dependent RNA helicase DDX42 [Rattus norvegicus]
gi|149054552|gb|EDM06369.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 (predicted) [Rattus
norvegicus]
Length = 929
Score = 82.8 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 3/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
+I++ TP RL +++K +L RV YLV DEAD++F++G ++ + + P
Sbjct: 378 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 435
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L + E
Sbjct: 436 LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEF 495
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + VL+FV K A+EL L + G++H D+ Q++
Sbjct: 496 TSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSE 536
>gi|350590222|ref|XP_003131337.3| PREDICTED: ATP-dependent RNA helicase DDX42 [Sus scrofa]
Length = 906
Score = 82.8 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 3/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
+I++ TP RL +++K +L RV YLV DEAD++F++G ++ + + P
Sbjct: 343 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 400
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L + E
Sbjct: 401 LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEF 460
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + VL+FV K A+EL L + G++H D+ Q++
Sbjct: 461 TSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSE 501
>gi|296201782|ref|XP_002748184.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Callithrix jacchus]
Length = 934
Score = 82.8 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 3/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
+I++ TP RL +++K +L RV YLV DEAD++F++G ++ + + P
Sbjct: 378 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 435
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L + E
Sbjct: 436 LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEF 495
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + VL+FV K A+EL L + G++H D+ Q++
Sbjct: 496 TSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSE 536
>gi|45446743|ref|NP_031398.2| ATP-dependent RNA helicase DDX42 [Homo sapiens]
gi|45446747|ref|NP_987095.1| ATP-dependent RNA helicase DDX42 [Homo sapiens]
gi|74750541|sp|Q86XP3.1|DDX42_HUMAN RecName: Full=ATP-dependent RNA helicase DDX42; AltName: Full=DEAD
box protein 42; AltName: Full=RNA helicase-like protein;
Short=RHELP; AltName: Full=RNA helicase-related protein;
Short=RNAHP; AltName: Full=SF3b DEAD box protein;
AltName: Full=Splicing factor 3B-associated 125 kDa
protein; Short=SF3b125
gi|29420431|dbj|BAC66466.1| RNA helicase-related protein [Homo sapiens]
gi|62205357|gb|AAH93081.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Homo sapiens]
gi|119614683|gb|EAW94277.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42, isoform CRA_b [Homo
sapiens]
gi|168277556|dbj|BAG10756.1| ATP-dependent RNA helicase DDX42 [synthetic construct]
Length = 938
Score = 82.8 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 3/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
+I++ TP RL +++K +L RV YLV DEAD++F++G ++ + + P
Sbjct: 378 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 435
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L + E
Sbjct: 436 LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEF 495
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + VL+FV K A+EL L + G++H D+ Q++
Sbjct: 496 TSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSE 536
>gi|326531018|dbj|BAK04860.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531744|dbj|BAJ97876.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 415
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 88/166 (53%), Gaps = 9/166 (5%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-- 70
K C+I+++TP RL ++ K + + R Y VLDEAD++F++G +P +++
Sbjct: 161 KSGCEIVVATPGRLIDLLKMKALRMFRATYSVLDEADRMFDLG-----FEPQIRSIVGQI 215
Query: 71 -PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 129
P LFSAT+P VE LAR I+ D +RV VG+ +A+E IKQ + S+ K+ L
Sbjct: 216 RPDRQTLLFSATMPYKVERLAREILTDLIRVTVGQVGSANEDIKQVVNVLPSDAEKMPWL 275
Query: 130 RQSFAESL-NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ + + VL+F K R E+ +L + +H D Q
Sbjct: 276 LEKMPGMIDDGDVLVFATKKARVDEVENQLNQHGFKVAALHGDKDQ 321
>gi|401676603|ref|ZP_10808587.1| ATP-dependent RNA helicase RhlE [Enterobacter sp. SST3]
gi|400216287|gb|EJO47189.1| ATP-dependent RNA helicase RhlE [Enterobacter sp. SST3]
Length = 459
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 86/162 (53%), Gaps = 3/162 (1%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ D+L++TP RL + + L +E LVLDEAD++ ++G + H V A P
Sbjct: 123 RGGVDVLVATPGRLLDLEHQNAVKLDNIEILVLDEADRMLDMGFI--HDIRRVLAKLPPR 180
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
LFSAT D ++ LA ++H+ + V V R+NTASE + Q + F + + L L Q
Sbjct: 181 RQNLLFSATFSDEIKALAEKLLHNPLEVEVARRNTASEQVTQHVHFVDKKRKREL-LSQM 239
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ VL+F ++K A L +L D IR+ IH + SQ
Sbjct: 240 IGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQ 281
>gi|449548222|gb|EMD39189.1| hypothetical protein CERSUDRAFT_81950 [Ceriporiopsis subvermispora
B]
Length = 641
Score = 82.8 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 57/164 (34%), Positives = 85/164 (51%), Gaps = 5/164 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L +TP RL I R +I L+ V YLVLDEAD++ ++G I +V+ P +
Sbjct: 308 CDLLSATPGRLVDLIERGRISLANVRYLVLDEADRMLDMG-FEPQIRRIVQGEDMPGVQE 366
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR M D V + VGR + SE+I QK+ + + K L
Sbjct: 367 RQTLMFSATFPRDIQMLARDFMKDYVFLSVGRVGSTSENITQKVEYV-EDPDKRSVLLDV 425
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L+FV++K A L L ++ A IH D +Q +
Sbjct: 426 LSAHDGGLTLVFVETKRMADMLSDFLLASNLPATSIHGDRTQRE 469
>gi|254457659|ref|ZP_05071087.1| putative helicase [Sulfurimonas gotlandica GD1]
gi|373867807|ref|ZP_09604205.1| putative RNA-helicase, DEAD/DEAH box family [Sulfurimonas
gotlandica GD1]
gi|207086451|gb|EDZ63735.1| putative helicase [Sulfurimonas gotlandica GD1]
gi|372469908|gb|EHP30112.1| putative RNA-helicase, DEAD/DEAH box family [Sulfurimonas
gotlandica GD1]
Length = 423
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 93/164 (56%), Gaps = 9/164 (5%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG---NLLKHIDPVVKACSNP 71
DI+I+TP RL I +K IDLS+V++L+LDEAD++ ++G ++ K ++ + K N
Sbjct: 124 GIDIVIATPGRLLDHISQKTIDLSKVDFLILDEADRMLDMGFINDIRKILEILPKQRQN- 182
Query: 72 SIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
LFSAT D +++L+ +++ + V R+NTASE++KQ V+ +E K L
Sbjct: 183 ----LLFSATYSDEIKKLSDRLLNSPTLIEVARRNTASETVKQA-VYPVDKERKRELLTH 237
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
+ VL+F ++K A L +L D I + IH + SQ
Sbjct: 238 LINDGKWKQVLVFTRTKHGANRLSDQLEKDGITSAAIHGNKSQN 281
>gi|452821560|gb|EME28589.1| ATP-dependent RNA helicase [Galdieria sulphuraria]
Length = 587
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 89/167 (53%), Gaps = 19/167 (11%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG------NLLKHIDPVVKACSN 70
DIL+ TP R+ I+ K L +V +LVLDEAD++ ++G ++L I P + C
Sbjct: 313 DILVGTPGRIIDLIKSKGCSLQQVTFLVLDEADRMLDLGFEPQVRSILGQIRPDRQVC-- 370
Query: 71 PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
LFSAT + V++L R + +AVR+ VG +A+E I+Q + F SE+ K+ L
Sbjct: 371 ------LFSATFRNRVQQLVRETIAEAVRITVGEAGSANEDIEQVVKFVSSEDEKISWLC 424
Query: 131 Q---SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ F E N V++FV ++ L +L +I IH + SQ
Sbjct: 425 EHLPQFLERGN--VIVFVGTRASCASLTNQLRSHNIPTCAIHGETSQ 469
>gi|340616052|ref|YP_004734505.1| RNA helicase CsdA [Zobellia galactanivorans]
gi|339730849|emb|CAZ94113.1| RNA helicase CsdA [Zobellia galactanivorans]
Length = 596
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 93/168 (55%), Gaps = 11/168 (6%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
K I+++TP R++ I R +D+++++Y VLDEAD++ +G + + SN
Sbjct: 120 KRGAQIVVATPGRMKDMISRGLVDITKIDYCVLDEADEMLNMG----FFEDIKDILSNTP 175
Query: 73 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
+S LFSAT+P V +A+ MH + + VG KN + +++ + G + + AL+
Sbjct: 176 KDKSTWLFSATMPREVATIAKKFMHSPIEITVGAKNAGTSNVQHEYYVVGGRD-RYPALK 234
Query: 131 QSFAESLNPPV--LIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ A++ NP + ++F ++K + + +L D AG +H DLSQ Q
Sbjct: 235 R-LADA-NPDIFSVVFCRTKRDTQRVAEKLIEDGYNAGALHGDLSQNQ 280
>gi|297620744|ref|YP_003708881.1| ATP-dependent RNA helicase DBP2 [Waddlia chondrophila WSU 86-1044]
gi|297376045|gb|ADI37875.1| ATP-dependent RNA helicase DBP2 [Waddlia chondrophila WSU 86-1044]
Length = 439
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 92/162 (56%), Gaps = 6/162 (3%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVK-ACSNPSIVR 75
+ILI+TP RL I +K I+LS +E LVLDEAD++ ++G I+PV K A + PS +
Sbjct: 126 EILIATPGRLIDYINQKAINLSAIEILVLDEADRMLDMG----FIEPVEKIAAATPSSRQ 181
Query: 76 SL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
+L FSAT+ V L+ ++++ + +++ + T E+I QKL + + K L
Sbjct: 182 TLLFSATMQGSVLNLSNRLLNEPMDIVIHSEKTKHENITQKLHYVDGLQHKNQLLEHILN 241
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + ++F +K A +L EL + AG +H D+SQ Q
Sbjct: 242 DDVVKHAIVFTSTKRHASQLVFELHDKGLLAGALHGDMSQRQ 283
>gi|290474026|ref|YP_003466900.1| ATP-dependent RNA helicase with P-loop hydrolase domain
[Xenorhabdus bovienii SS-2004]
gi|289173333|emb|CBJ80110.1| putative ATP-dependent RNA helicase with P-loop hydrolase domain
[Xenorhabdus bovienii SS-2004]
Length = 459
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 92/168 (54%), Gaps = 15/168 (8%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + +DLS VE L+LDEAD++ ++G I + + S
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVDLSHVEILILDEADRMLDMG----FIHDIRRVLSKLP 178
Query: 73 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSE-EGKLLAL 129
R LFSAT D ++ LA ++ D V + V R+N+ASE I Q + F + +G+LL+
Sbjct: 179 AKRQNLLFSATFSDDIKSLANKLLRDPVSIEVARRNSASEQIDQAVHFVDKKRKGELLSY 238
Query: 130 ---RQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
Q++ + VL+F ++K A L +L+ D + A IH + SQ
Sbjct: 239 MIGNQNWQQ-----VLVFTRTKHGANRLAEQLSQDGVTAAAIHGNKSQ 281
>gi|194216767|ref|XP_001501051.2| PREDICTED: ATP-dependent RNA helicase DDX42 [Equus caballus]
Length = 935
Score = 82.8 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 3/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
+I++ TP RL +++K +L RV YLV DEAD++F++G ++ + + P
Sbjct: 378 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 435
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L + E
Sbjct: 436 LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEF 495
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + VL+FV K A+EL L + G++H D+ Q++
Sbjct: 496 TSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSE 536
>gi|301778305|ref|XP_002924562.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Ailuropoda
melanoleuca]
Length = 935
Score = 82.4 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 3/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
+I++ TP RL +++K +L RV YLV DEAD++F++G ++ + + P
Sbjct: 378 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 435
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L + E
Sbjct: 436 LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEF 495
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + VL+FV K A+EL L + G++H D+ Q++
Sbjct: 496 TSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSE 536
>gi|392545351|ref|ZP_10292488.1| ATP-dependent RNA helicase [Pseudoalteromonas rubra ATCC 29570]
Length = 432
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 89/160 (55%), Gaps = 3/160 (1%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
DIL++TP RL IR + L++V+YLVLDEAD++ ++G + + V+ S +
Sbjct: 121 GVDILVATPGRLLDLIRLGAVSLAQVKYLVLDEADRMLDMG-FVTDMQKVIDMVSEERQL 179
Query: 75 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
LFSAT P V++ A+ ++ + V ++NT +E+++ +V+ ++ K L +
Sbjct: 180 -LLFSATFPTAVKQFAKQVLREPKLVQAAKENTTAETVRH-VVYPVEQKRKQELLSELIG 237
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ VL+FV KD A +L EL D I A V H D SQ
Sbjct: 238 KKNWLQVLVFVNMKDDADQLVKELELDGISATVCHGDKSQ 277
>gi|157146569|ref|YP_001453888.1| ATP-dependent RNA helicase RhlE [Citrobacter koseri ATCC BAA-895]
gi|157083774|gb|ABV13452.1| hypothetical protein CKO_02330 [Citrobacter koseri ATCC BAA-895]
Length = 454
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 87/162 (53%), Gaps = 3/162 (1%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ D+L++TP RL + + L ++E LVLDEAD++ ++G + H V A P
Sbjct: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQIEILVLDEADRMLDMGFI--HDIRRVLAKLPPK 180
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
LFSAT D ++ LA ++H+ + + V R+NTASE + Q + F + + L L Q
Sbjct: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASEQVTQHVHFVDKKRKREL-LSQM 239
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ VL+F ++K A L +L D IR+ IH + SQ
Sbjct: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQ 281
>gi|357511395|ref|XP_003625986.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355501001|gb|AES82204.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 775
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 87/167 (52%), Gaps = 9/167 (5%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-- 70
K C+I+++TP RL ++ K + + R YLVLDEAD++F++G +P V++
Sbjct: 352 KAGCEIVVATPGRLIDMLKMKALAMLRATYLVLDEADRMFDLG-----FEPQVRSIVGQI 406
Query: 71 -PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 129
P LFSAT+P VE+LAR I+ D +RV VG A+E I Q + S+ KL L
Sbjct: 407 RPDRQTLLFSATMPRKVEKLAREILSDPIRVTVGEVGMANEDITQVVQVIPSDSEKLPWL 466
Query: 130 RQSFAESLNPP-VLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
+ E ++ L+F K E+ +L + +H D Q+
Sbjct: 467 LEKLHEMIDQGDTLVFASKKATVDEIEVQLGQRGFKVAALHGDKDQS 513
>gi|347526899|ref|YP_004833646.1| putative helicase [Sphingobium sp. SYK-6]
gi|345135580|dbj|BAK65189.1| putative helicase [Sphingobium sp. SYK-6]
Length = 603
Score = 82.4 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVK-ACSNPSIV 74
CDIL++TP RL I ++ + L VE VLDEAD++ ++G I P+ + A P
Sbjct: 126 CDILVATPGRLLDLIEQRALTLRNVEIFVLDEADQMMDLG----FIQPLKRIAGMLPKER 181
Query: 75 RSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK---LLALR 130
+SL FSAT+P + +L + +H+ V+V V ++T +E ++Q F +E + L LR
Sbjct: 182 QSLFFSATMPQAIADLGKQFIHNPVKVEVAPQSTTAERVEQYATFVEQQEKQALLTLRLR 241
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
++ A L+F ++K A + L I A IH + SQ Q
Sbjct: 242 EAIASGALDRALVFTRTKHGADRVARHLVAAQISAAAIHGNKSQGQ 287
>gi|206579391|ref|YP_002239559.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae 342]
gi|290510541|ref|ZP_06549911.1| ATP-dependent RNA helicase RhlE [Klebsiella sp. 1_1_55]
gi|206568449|gb|ACI10225.1| putative ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae
342]
gi|289777257|gb|EFD85255.1| ATP-dependent RNA helicase RhlE [Klebsiella sp. 1_1_55]
Length = 451
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 85/164 (51%), Gaps = 7/164 (4%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + + L VE LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVSLDSVEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 73 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
R LFSAT D ++ LA ++H+ + V V R+NTASE I Q + F + L L
Sbjct: 179 ARRQNLLFSATFSDEIKGLAEKLLHNPLEVEVARRNTASEQITQHVHFVDKNRKREL-LS 237
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
Q E VL+F ++K A L +L D IR+ IH + SQ
Sbjct: 238 QLIGEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQ 281
>gi|409081667|gb|EKM82026.1| hypothetical protein AGABI1DRAFT_35315 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 654
Score = 82.4 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 91/166 (54%), Gaps = 6/166 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L +TP RL I R +I LS ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 304 CDLLSATPGRLVDLIERGRISLSNIKYLVLDEADRMLDMG-FEPQIRRIVQGEDMPDVHE 362
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LA+ + D + + VGR + SE+I QK+ + + + LL +
Sbjct: 363 RQTLMFSATFPRDIQILAKDFLKDYIFLSVGRVGSTSENITQKIEYVEDADKRSVLLDIL 422
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
S ++ LIFV++K A L L +++ A IH D SQ +
Sbjct: 423 ASQPKADLGLSLIFVETKRMADMLSDFLMGNNLPATSIHGDRSQRE 468
>gi|426196899|gb|EKV46827.1| hypothetical protein AGABI2DRAFT_70511 [Agaricus bisporus var.
bisporus H97]
Length = 656
Score = 82.4 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 91/166 (54%), Gaps = 6/166 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L +TP RL I R +I LS ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 304 CDLLSATPGRLVDLIERGRISLSNIKYLVLDEADRMLDMG-FEPQIRRIVQGEDMPDVHE 362
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LA+ + D + + VGR + SE+I QK+ + + + LL +
Sbjct: 363 RQTLMFSATFPRDIQILAKDFLKDYIFLSVGRVGSTSENITQKIEYVEDADKRSVLLDIL 422
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
S ++ LIFV++K A L L +++ A IH D SQ +
Sbjct: 423 ASQPKADLGLSLIFVETKRMADMLSDFLMGNNLPATSIHGDRSQRE 468
>gi|288936404|ref|YP_003440463.1| DEAD/DEAH box helicase [Klebsiella variicola At-22]
gi|288891113|gb|ADC59431.1| DEAD/DEAH box helicase domain protein [Klebsiella variicola At-22]
Length = 451
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 88/163 (53%), Gaps = 5/163 (3%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + + L VE LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVSLDSVEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 73 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
++L FSAT D ++ LA ++H+ + V V R+NTASE I Q + F + L L Q
Sbjct: 180 RRQNLLFSATFSDEIKGLAEKLLHNPLEVEVARRNTASEQITQHVHFVDKNRKREL-LSQ 238
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
E VL+F ++K A L +L D IR+ IH + SQ
Sbjct: 239 LIGEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQ 281
>gi|367037389|ref|XP_003649075.1| hypothetical protein THITE_2107255 [Thielavia terrestris NRRL 8126]
gi|346996336|gb|AEO62739.1| hypothetical protein THITE_2107255 [Thielavia terrestris NRRL 8126]
Length = 666
Score = 82.4 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 89/166 (53%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 322 CDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMG-FEPQIRRIVQGEDMPPTGQ 380
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LA+ + D V + VGR + SE+I QK+ + + + LL +
Sbjct: 381 RQTLMFSATFPRDIQMLAQDFLSDYVFLSVGRVGSTSENITQKIEYVEDIDKRSVLLDIL 440
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ A L LIFV++K A L L + A IH D +Q +
Sbjct: 441 HTHAGGL---TLIFVETKRMADSLSDFLINQNFPATSIHGDRTQRE 483
>gi|237730773|ref|ZP_04561254.1| ATP-dependent RNA helicase RhlE [Citrobacter sp. 30_2]
gi|226906312|gb|EEH92230.1| ATP-dependent RNA helicase RhlE [Citrobacter sp. 30_2]
Length = 448
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 87/164 (53%), Gaps = 7/164 (4%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ D+LI+TP RL + + L +VE LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDVLIATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 73 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
R LFSAT D ++ LA ++H+ + + V R+NTASE + Q + F + + L L
Sbjct: 179 TKRQNLLFSATFSDDIKSLAEKLLHNPLEIEVARRNTASEQVTQHVHFVDKKRKREL-LS 237
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
Q + VL+F ++K A L +L D IR+ IH + SQ
Sbjct: 238 QMIGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQ 281
>gi|222144592|gb|ACM46113.1| DDX3/PL10 DEAD-box RNA helicase [Schmidtea polychroa]
Length = 458
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 95/172 (55%), Gaps = 11/172 (6%)
Query: 10 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
DLS+ C++L++TP RL + R +I L + YLVLDEAD++ ++G I +V+ +
Sbjct: 82 DLSQ-GCNMLVATPGRLSDMLERCRIGLDCIRYLVLDEADRMLDMG-FEPQIRKIVEQTN 139
Query: 70 NPSIVRS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK- 125
P + +FSAT P ++ LA + D + + VG+ + S++I Q++V+ E +
Sbjct: 140 MPPPGQRQTLMFSATFPKEIQMLASDFLQDYLFLRVGKVGSTSQNITQRIVYVDESEKRD 199
Query: 126 --LLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
L L +ESL +L+FV++K A L G L + R IH D SQ+
Sbjct: 200 HLLDILADIDSESL---ILVFVETKRGADSLEGFLHGEGFRVASIHGDRSQS 248
>gi|3435312|gb|AAC32396.1| RNA helicase-related protein [Homo sapiens]
Length = 709
Score = 82.4 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 3/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
+I++ TP RL +++K +L RV YLV DEAD++F++G ++ + + P
Sbjct: 259 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 316
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L + E
Sbjct: 317 LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEF 376
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + VL+FV K A+EL L + G++H D+ Q++
Sbjct: 377 TSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSE 417
>gi|171693513|ref|XP_001911681.1| hypothetical protein [Podospora anserina S mat+]
gi|170946705|emb|CAP73508.1| unnamed protein product [Podospora anserina S mat+]
Length = 694
Score = 82.4 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 331 CDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMG-FEPQIRRIVQGEDMPLTGQ 389
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LA+ ++D V + VGR + SE+I QK+ + + + LL +
Sbjct: 390 RQTLMFSATFPRDIQMLAQDFLNDYVFLSVGRVGSTSENITQKVEYVEDVDKRSVLLDIL 449
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ A L LIFV++K A L L + A IH D +Q +
Sbjct: 450 HTHAGGL---TLIFVETKRMADSLSDFLINQNFPATSIHGDRTQRE 492
>gi|307720922|ref|YP_003892062.1| DEAD/DEAH box helicase [Sulfurimonas autotrophica DSM 16294]
gi|306979015|gb|ADN09050.1| DEAD/DEAH box helicase domain protein [Sulfurimonas autotrophica
DSM 16294]
Length = 417
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 84/161 (52%), Gaps = 3/161 (1%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
DI+I+TP RL I +K IDL VEYL+LDEAD++ ++G + I ++ N
Sbjct: 128 GTDIVIATPGRLLDHISQKTIDLREVEYLILDEADRMLDMG-FINDIKKILNIIPNQRQT 186
Query: 75 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
LFSAT D +++L+ ++ + V R NT+SE +KQ + + L L
Sbjct: 187 L-LFSATYSDAIKKLSNQFLNAPKLIEVARANTSSEIVKQAVYHVDKTRKREL-LTHLIN 244
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
E VL+F ++K A L G+L D I A IH + SQ
Sbjct: 245 EGKWQQVLVFTRTKHGANRLSGQLESDGITAVAIHGNKSQN 285
>gi|281351661|gb|EFB27245.1| hypothetical protein PANDA_013938 [Ailuropoda melanoleuca]
Length = 940
Score = 82.4 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 3/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
+I++ TP RL +++K +L RV YLV DEAD++F++G ++ + + P
Sbjct: 383 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 440
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L + E
Sbjct: 441 LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEF 500
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + VL+FV K A+EL L + G++H D+ Q++
Sbjct: 501 TSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSE 541
>gi|15930131|gb|AAH15505.1| DDX42 protein [Homo sapiens]
gi|23336904|tpg|DAA00077.1| TPA_exp: SF3b125 DEAD-box protein [Homo sapiens]
gi|158259277|dbj|BAF85597.1| unnamed protein product [Homo sapiens]
Length = 819
Score = 82.4 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 3/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
+I++ TP RL +++K +L RV YLV DEAD++F++G ++ + + P
Sbjct: 259 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 316
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L + E
Sbjct: 317 LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEF 376
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + VL+FV K A+EL L + G++H D+ Q++
Sbjct: 377 TSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSE 417
>gi|358417495|ref|XP_003583658.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX42
[Bos taurus]
gi|359077050|ref|XP_003587506.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX42
[Bos taurus]
Length = 947
Score = 82.4 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 3/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
+I++ TP RL +++K +L RV YLV DEAD++F++G ++ + + P
Sbjct: 378 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 435
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L + E
Sbjct: 436 LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGXSKWNWLTRRLVEF 495
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + VL+FV K A+EL L + G++H D+ Q++
Sbjct: 496 TSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSE 536
>gi|346994009|ref|ZP_08862081.1| DEAD/DEAH box helicase-like protein [Ruegeria sp. TW15]
Length = 419
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 88/164 (53%), Gaps = 7/164 (4%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL + R +DL V++LVLDEAD++ ++G + L+ I P +
Sbjct: 125 GTDILVATPGRLIDLMDRGAVDLGSVKHLVLDEADQMLDMGFIHALRRIAPELGTPRQ-- 182
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
LFSAT+P +EEL+R+ + + RV V A++ I Q + F + K LR+
Sbjct: 183 --TMLFSATMPKQMEELSRAYLTNPQRVQVSPPGKAADKITQSIHFV-EKPAKPAKLREI 239
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ ++ L+F ++K A++L L D A IH + SQ Q
Sbjct: 240 LSADMDALTLVFSRTKHGAEKLMKGLVADGFNAASIHGNKSQGQ 283
>gi|37676599|ref|NP_936995.1| DNA and RNA helicase [Vibrio vulnificus YJ016]
gi|37201142|dbj|BAC96965.1| DNA and RNA helicase [Vibrio vulnificus YJ016]
Length = 445
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 90/163 (55%), Gaps = 7/163 (4%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL I + ++ +E+LV DEAD++ ++G N ++ I ++ +NP
Sbjct: 142 GVDILVATPGRLEEHIESGNVSVANIEFLVFDEADRILDMGFINAVRKI--MLDVETNPQ 199
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
I+ +FSAT + EL++ I+ R+ V R+NT + ++ +++ +E K L +
Sbjct: 200 IM--MFSATTSSQLNELSKDILRKPKRIAVERENTTAHTVAH-VLYPVDQERKTELLSEL 256
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
VL+FV K+ A ++ EL D I+A V H D +Q+
Sbjct: 257 IGRKNWQQVLVFVNYKETANDIVKELKLDGIKANVCHGDKAQS 299
>gi|343425171|emb|CBQ68708.1| probable DED1-ATP-dependent RNA helicase [Sporisorium reilianum
SRZ2]
Length = 674
Score = 82.4 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 54/164 (32%), Positives = 88/164 (53%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L +TP RL + R +I LS V +LVLDEAD++ ++G I +V+ P ++
Sbjct: 327 CDLLAATPGRLVDLMERGRISLSNVRFLVLDEADRMLDMG-FEPQIRRIVEGEDMPGVMD 385
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LA+ + + V + VGR + SE+I QK+ + ++ + + L
Sbjct: 386 RQTLMFSATFPRDIQLLAKDFLKEYVFLSVGRVGSTSENITQKIEYVEDDDKRSVLLDVL 445
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ LIFV++K A L L +I A IH D +Q +
Sbjct: 446 ASMPSGGLTLIFVETKRMADMLSDFLLRSNIAATSIHGDRTQRE 489
>gi|452983631|gb|EME83389.1| hypothetical protein MYCFIDRAFT_39242 [Pseudocercospora fijiensis
CIRAD86]
Length = 706
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 102/198 (51%), Gaps = 48/198 (24%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFE---------VGNLLKHIDPVVK 66
D+L+STP L + L V+YLVLDEAD L + + + L H++ V
Sbjct: 333 SDVLVSTPGILASIVSASDAKLPDVQYLVLDEADVLLDPLFREQTLGIWHALPHVELRV- 391
Query: 67 ACSNPSIVRSLFSATLPDFVEELARSIMHDA-------------VRVIVGRKNTASESIK 113
SL+SAT+ +EELA S++ + +R++VG K++A +++
Sbjct: 392 ---------SLWSATMGSNIEELAISVIGERKAKLGIVQDDSPLIRLVVGLKDSAVPNVE 442
Query: 114 QKLVFAGSEEGKLLALRQ------SFAESLNP---PVLIFVQSKDRAKELYGELAFD-DI 163
+L++A SE+GKL+ LRQ +E+ P P L+F Q+ +RA L+ EL +D
Sbjct: 443 HRLIYAASEQGKLMGLRQLLHPTTPSSEAGPPLLLPFLVFTQTIERAVALHSELLYDIPA 502
Query: 164 RAG------VIHSDLSQT 175
AG V+HSDLS +
Sbjct: 503 EAGGISRIAVLHSDLSDS 520
>gi|27366822|ref|NP_762349.1| ATP-dependent RNA helicase [Vibrio vulnificus CMCP6]
gi|320158706|ref|YP_004191084.1| ATP-dependent RNA helicase [Vibrio vulnificus MO6-24/O]
gi|27358389|gb|AAO07339.1| ATP-dependent RNA helicase [Vibrio vulnificus CMCP6]
gi|319934018|gb|ADV88881.1| ATP-dependent RNA helicase [Vibrio vulnificus MO6-24/O]
Length = 427
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 90/163 (55%), Gaps = 7/163 (4%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL I + ++ +E+LV DEAD++ ++G N ++ I ++ +NP
Sbjct: 124 GVDILVATPGRLEEHIESGNVSVANIEFLVFDEADRILDMGFINAVRKI--MLDVETNPQ 181
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
I+ +FSAT + EL++ I+ R+ V R+NT + ++ +++ +E K L +
Sbjct: 182 IM--MFSATTSSQLNELSKDILRKPKRIAVERENTTAHTVAH-VLYPVDQERKTELLSEL 238
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
VL+FV K+ A ++ EL D I+A V H D +Q+
Sbjct: 239 IGRKNWQQVLVFVNYKETANDIVKELKLDGIKANVCHGDKAQS 281
>gi|448098046|ref|XP_004198829.1| Piso0_002219 [Millerozyma farinosa CBS 7064]
gi|359380251|emb|CCE82492.1| Piso0_002219 [Millerozyma farinosa CBS 7064]
Length = 552
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 94/167 (56%), Gaps = 6/167 (3%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
+++++TP RL I I+L V+YLVLDEAD++ E G + I +++ + S
Sbjct: 261 GANVVVATPGRLIDIINDGAINLGTVDYLVLDEADRMLEKG-FEQDIKTIMQNTAGASRQ 319
Query: 75 RSLFSATLPDFVEELARSIMHDAVRVIVGRKN--TASESIKQ--KLVFAGSEEGKLLA-L 129
+F+AT P V ELA S M++ V+V +G ++ A++ I+Q +++ +E KLL+ L
Sbjct: 320 TVMFTATWPKEVRELASSFMNNPVKVNIGNRDELVANKRIEQIVEVIEPYHKENKLLSLL 379
Query: 130 RQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
R+ +++ N +LIF K A+ + L + IH DLSQ Q
Sbjct: 380 RKYQSKNKNDKILIFALYKKEARRIESLLQRNSFEVAAIHGDLSQQQ 426
>gi|19075533|ref|NP_588033.1| ATP-dependent RNA helicase Sum3 [Schizosaccharomyces pombe 972h-]
gi|21542025|sp|O13370.1|DED1_SCHPO RecName: Full=ATP-dependent RNA helicase ded1; AltName:
Full=Multicopy suppressor of overexpressed cyr1 protein
2
gi|2558968|gb|AAC04893.1| suppressor of uncontrolled mitosis [Schizosaccharomyces pombe]
gi|3080516|emb|CAA18646.1| ATP-dependent RNA helicase Sum3 [Schizosaccharomyces pombe]
gi|3514095|gb|AAC34121.1| putative DEAD box RNA helicase Dep1 [Schizosaccharomyces pombe]
gi|4582232|emb|CAB40192.1| putative RNA helicase [Schizosaccharomyces pombe]
Length = 636
Score = 82.4 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 59/168 (35%), Positives = 88/168 (52%), Gaps = 12/168 (7%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSI 73
CD+L +TP RL I R +I L+ +++LVLDEAD++ ++G ++HI S
Sbjct: 306 CDLLSATPGRLVDLIDRGRISLANIKFLVLDEADRMLDMGFEPQIRHIVEGADMTSVEER 365
Query: 74 VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALRQ 131
+FSAT P ++ LAR + D V + VGR + SE+I QK+V E + LL +
Sbjct: 366 QTLMFSATFPRDIQLLARDFLKDYVFLSVGRVGSTSENITQKVVHVEDSEKRSYLLDILH 425
Query: 132 SFAESLNPP---VLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ PP LIFV++K A L L + A IH D +Q +
Sbjct: 426 TL-----PPEGLTLIFVETKRMADTLTDYLLNSNFPATSIHGDRTQRE 468
>gi|345298444|ref|YP_004827802.1| DEAD/DEAH box helicase [Enterobacter asburiae LF7a]
gi|345092381|gb|AEN64017.1| DEAD/DEAH box helicase domain protein [Enterobacter asburiae LF7a]
Length = 459
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 86/162 (53%), Gaps = 3/162 (1%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ D+L++TP RL + + L +E LVLDEAD++ ++G + H V A P
Sbjct: 123 RGGVDVLVATPGRLLDLEHQNAVKLDSIEILVLDEADRMLDMGFI--HDIRRVLAKLPPR 180
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
LFSAT D ++ LA ++H+ + V V R+NTASE + Q + F + + L L Q
Sbjct: 181 RQNLLFSATFSDEIKALAEKLLHNPLEVEVARRNTASEQVTQHVHFVDKKRKREL-LSQM 239
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ VL+F ++K A L +L D IR+ IH + SQ
Sbjct: 240 IGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQ 281
>gi|345867166|ref|ZP_08819183.1| DEAD/DEAH box helicase family protein [Bizionia argentinensis
JUB59]
gi|344048380|gb|EGV43987.1| DEAD/DEAH box helicase family protein [Bizionia argentinensis
JUB59]
Length = 613
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 91/174 (52%), Gaps = 23/174 (13%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG------NLLKHIDPVVK 66
K I+++TP R++ I+R+ +D+S+++Y VLDEAD++ +G +L H P K
Sbjct: 120 KRGAQIIVATPGRMKDMIKRRLVDISKIKYSVLDEADEMLNMGFKEDITEILSHT-PEEK 178
Query: 67 ACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQK--LVFAGSEEG 124
LFSAT+P V +A+ M D + + VG KN ++ + + LV A G
Sbjct: 179 NT-------WLFSATMPKEVSNIAKKFMVDPIEITVGNKNESTNQVSHEYYLVNARDRYG 231
Query: 125 KLLALRQSFAESLNPPV--LIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L L + NP + +IF ++K +++ +L D AG +H DLSQ Q
Sbjct: 232 ALKRLADA-----NPEIFSVIFCRTKRDTQKVAEQLIEDGYSAGALHGDLSQNQ 280
>gi|350632116|gb|EHA20484.1| hypothetical protein ASPNIDRAFT_203639 [Aspergillus niger ATCC
1015]
Length = 1569
Score = 82.4 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 54/164 (32%), Positives = 85/164 (51%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YL+LDEAD++ ++G I +V+ P +
Sbjct: 325 CDLLVATPGRLVDLIERGRISLVNIKYLILDEADRMLDMG-FEPQIRRIVEGEDMPHVND 383
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + D V + VGR + SE+I QK+ + + + + L
Sbjct: 384 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVEDHDKRSVLLDIL 443
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ LIFV++K A L L A IH D +Q +
Sbjct: 444 HTHGTSGLTLIFVETKRMADSLSDFLLNQRFPATAIHGDRTQRE 487
>gi|2992158|dbj|BAA25324.1| Moc2 RNA helicase [Schizosaccharomyces pombe]
Length = 636
Score = 82.4 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 59/168 (35%), Positives = 88/168 (52%), Gaps = 12/168 (7%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSI 73
CD+L +TP RL I R +I L+ +++LVLDEAD++ ++G ++HI S
Sbjct: 306 CDLLSATPGRLVDLIDRGRISLANIKFLVLDEADRMLDMGFEPQIRHIVEGADMTSVEER 365
Query: 74 VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALRQ 131
+FSAT P ++ LAR + D V + VGR + SE+I QK+V E + LL +
Sbjct: 366 QTLMFSATFPRDIQLLARDFLKDYVFLSVGRVGSTSENITQKVVHVEDSEKRSYLLDILH 425
Query: 132 SFAESLNPP---VLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ PP LIFV++K A L L + A IH D +Q +
Sbjct: 426 TL-----PPEGLTLIFVETKRMADTLTDYLLNSNFPATSIHGDRTQRE 468
>gi|395227497|ref|ZP_10405823.1| ATP-dependent RNA helicase RhlE [Citrobacter sp. A1]
gi|421844472|ref|ZP_16277630.1| ATP-dependent RNA helicase RhlE [Citrobacter freundii ATCC 8090 =
MTCC 1658]
gi|424728799|ref|ZP_18157404.1| atp-dependent rna helicase [Citrobacter sp. L17]
gi|394718825|gb|EJF24446.1| ATP-dependent RNA helicase RhlE [Citrobacter sp. A1]
gi|411774627|gb|EKS58117.1| ATP-dependent RNA helicase RhlE [Citrobacter freundii ATCC 8090 =
MTCC 1658]
gi|422896670|gb|EKU36452.1| atp-dependent rna helicase [Citrobacter sp. L17]
Length = 448
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 90/163 (55%), Gaps = 5/163 (3%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ D+LI+TP RL + + L +VE LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDVLIATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 73 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
++L FSAT D ++ LA ++H+ + + V R+NTASE + Q + F + + L L Q
Sbjct: 180 KRQNLLFSATFSDDIKSLAEKLLHNPLEIEVARRNTASEQVTQHVHFVDKKRKREL-LSQ 238
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ VL+F ++K A L +L D IR+ IH + SQ
Sbjct: 239 MIGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQ 281
>gi|455643914|gb|EMF23035.1| ATP-dependent RNA helicase RhlE [Citrobacter freundii GTC 09479]
Length = 448
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 90/163 (55%), Gaps = 5/163 (3%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ D+LI+TP RL + + L +VE LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDVLIATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 73 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
++L FSAT D ++ LA ++H+ + + V R+NTASE + Q + F + + L L Q
Sbjct: 180 KRQNLLFSATFSDDIKSLAEKLLHNPLEIEVARRNTASEQVTQHVHFVDKKRKREL-LSQ 238
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ VL+F ++K A L +L D IR+ IH + SQ
Sbjct: 239 MIGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQ 281
>gi|363892696|ref|ZP_09319856.1| hypothetical protein HMPREF9630_01934 [Eubacteriaceae bacterium
CM2]
gi|361963130|gb|EHL16216.1| hypothetical protein HMPREF9630_01934 [Eubacteriaceae bacterium
CM2]
Length = 383
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 92/161 (57%), Gaps = 5/161 (3%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
+ ++++TP RL IR I++ + L++DEAD++ E G L + K N IV
Sbjct: 120 NSQLIVATPGRLLEHIRAGNINMKYIRQLIIDEADQMLEYGFLEDIVLLKDKLPDNLQIV 179
Query: 75 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
L SAT+P+ + +LA+ ++ + V++ + ++NT +++I+Q L+F SE+ KL L+
Sbjct: 180 --LLSATMPNPIIDLAKKLIKNPVKIDITQENTVTDNIEQ-LIFKTSEKNKLSTLK-FVI 235
Query: 135 ESLNP-PVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
E NP +IF SK A++LY + D ++H D SQ
Sbjct: 236 EQYNPFMAIIFCNSKKNAEKLYELMGVDGYDCDILHGDFSQ 276
>gi|308159786|gb|EFO62305.1| ATP-dependent RNA helicase [Giardia lamblia P15]
Length = 554
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 93/187 (49%), Gaps = 13/187 (6%)
Query: 2 KKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHI 61
+KE V + + DI+++TPL L + + ++ +VLDE D L ++ I
Sbjct: 199 RKETVTQSLANSKKHDIMVTTPLVLLNFLTEGIVRFPNLQTIVLDEVDCLMNP-QFIEQI 257
Query: 62 DPVVKA-----------CSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASE 110
D V++ C V +LFSA++ D V L + + D V++ V +
Sbjct: 258 DAVLEWILKTNANTGGYCPADRPVFTLFSASVTDQVFGLVNTFLVDPVQISVAGAGMPTN 317
Query: 111 SIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGEL-AFDDIRAGVIH 169
++KQ +FAG + K+ L+Q+ E PPVL+F + DR +Y EL + D G +H
Sbjct: 318 TVKQHFMFAGRDRYKMFTLQQAIMEYGKPPVLVFASTSDRVFTIYKELICYVDWPTGYLH 377
Query: 170 SDLSQTQ 176
+ L+++Q
Sbjct: 378 AGLTKSQ 384
>gi|270012072|gb|EFA08520.1| hypothetical protein TcasGA2_TC006173 [Tribolium castaneum]
Length = 702
Score = 82.0 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 53/168 (31%), Positives = 92/168 (54%), Gaps = 9/168 (5%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-- 70
K DI+++TP R+ ++ +L RV +LVLDEAD++FE+G +P V++ N
Sbjct: 352 KEGADIVVATPGRIIDHVKGGATNLQRVTFLVLDEADRMFELG-----FEPQVRSVCNHV 406
Query: 71 -PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 129
P LFSAT +E+LA+ ++D VR+ G A+E + Q+++ +++ K L
Sbjct: 407 RPDRQTLLFSATFRKRIEKLAKDALNDPVRISQGITGQANEDVTQRVLLMENQQLKRDWL 466
Query: 130 RQSFAESLNP-PVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ E L+ VL+FV K A++L +L + ++H D+ Q +
Sbjct: 467 VNNLVELLSAGSVLVFVTKKVDAEQLANDLKVKEFECLLLHGDIEQAE 514
>gi|51258614|gb|AAH78667.1| DDX42 protein, partial [Homo sapiens]
Length = 919
Score = 82.0 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 3/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
+I++ TP RL +++K +L RV YLV DEAD++F++G ++ + + P
Sbjct: 359 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 416
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L + E
Sbjct: 417 LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEF 476
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + VL+FV K A+EL L + G++H D+ Q++
Sbjct: 477 TSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSE 517
>gi|443706339|gb|ELU02447.1| hypothetical protein CAPTEDRAFT_155002 [Capitella teleta]
Length = 806
Score = 82.0 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 56/164 (34%), Positives = 85/164 (51%), Gaps = 9/164 (5%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSI 73
+I++ TP R+ +R+K +L R YLV DEAD++F++G + V++ +N P
Sbjct: 337 EIIVCTPGRMIDLVRKKATNLLRTTYLVFDEADRMFDMG-----FETQVRSIANHVRPDR 391
Query: 74 VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 133
LFSAT VE+LAR I+ D +RV+ G A+E + Q + + K L
Sbjct: 392 QTMLFSATFRKRVEKLARDILTDPIRVVQGDVGEANEDVTQIVKVMQTGPYKWNWLINRL 451
Query: 134 AE-SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E + VLIFV K EL L D + G++H D+SQ +
Sbjct: 452 VEFTSGGTVLIFVTRKANCIELADNLKTRDFKVGLMHGDMSQGE 495
>gi|426238255|ref|XP_004013070.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Ovis aries]
Length = 948
Score = 82.0 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 3/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
+I++ TP RL +++K +L RV YLV DEAD++F++G ++ + + P
Sbjct: 378 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 435
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L + E
Sbjct: 436 LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEF 495
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + VL+FV K A+EL L + G++H D+ Q++
Sbjct: 496 TSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSE 536
>gi|420369243|ref|ZP_14869968.1| ATP-dependent RNA helicase rhlE [Shigella flexneri 1235-66]
gi|391321569|gb|EIQ78292.1| ATP-dependent RNA helicase rhlE [Shigella flexneri 1235-66]
Length = 447
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 87/164 (53%), Gaps = 7/164 (4%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ D+LI+TP RL + + L +VE LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDVLIATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 73 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
R LFSAT D ++ LA ++H+ + + V R+NTASE + Q + F + + L L
Sbjct: 179 AKRQNLLFSATFSDDIKSLAEKLLHNPLEIEVARRNTASEQVTQHVHFVDKKRKREL-LS 237
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
Q + VL+F ++K A L +L D IR+ IH + SQ
Sbjct: 238 QMIGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQ 281
>gi|365105460|ref|ZP_09334707.1| ATP-dependent RNA helicase rhlE [Citrobacter freundii 4_7_47CFAA]
gi|363643475|gb|EHL82793.1| ATP-dependent RNA helicase rhlE [Citrobacter freundii 4_7_47CFAA]
Length = 448
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 90/163 (55%), Gaps = 5/163 (3%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ D+LI+TP RL + + L +VE LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDVLIATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 73 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
++L FSAT D ++ LA ++H+ + + V R+NTASE + Q + F + + L L Q
Sbjct: 180 KRQNLLFSATFSDDIKSLAEKLLHNPLEIEVARRNTASEQVTQHVHFVDKKRKREL-LSQ 238
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ VL+F ++K A L +L D IR+ IH + SQ
Sbjct: 239 MIGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQ 281
>gi|313147103|ref|ZP_07809296.1| ATP-dependent RNA helicase [Bacteroides fragilis 3_1_12]
gi|424663494|ref|ZP_18100531.1| hypothetical protein HMPREF1205_03880 [Bacteroides fragilis HMW
616]
gi|313135870|gb|EFR53230.1| ATP-dependent RNA helicase [Bacteroides fragilis 3_1_12]
gi|404577184|gb|EKA81922.1| hypothetical protein HMPREF1205_03880 [Bacteroides fragilis HMW
616]
Length = 418
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 90/164 (54%), Gaps = 6/164 (3%)
Query: 14 FSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI 73
D++I+TP RL + +DLSRV Y +LDEAD++ ++G + I +VK P
Sbjct: 124 LGADVVIATPGRLIAHLSLGYVDLSRVSYFILDEADRMLDMG-FYEDIMQIVKYL--PKE 180
Query: 74 VRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
++ +FSAT+P +++LA +I+++ V V + A + ++ V E KL +R
Sbjct: 181 RQTIMFSATMPSKIQQLANTILNNPVEVKLAVSKPAEKIVQAAYVC--YENQKLGIVRSL 238
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
FAE + V+IF SK + KE+ L + G +HSDL Q Q
Sbjct: 239 FAEEVPERVIIFASSKLKVKEVAKALKMMKLNVGEMHSDLEQAQ 282
>gi|432867546|ref|XP_004071236.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Oryzias latipes]
Length = 903
Score = 82.0 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 54/162 (33%), Positives = 87/162 (53%), Gaps = 5/162 (3%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
+I++ TP RL +++K L RV YLV DEAD++F++G ++ + + P
Sbjct: 376 EIVVCTPGRLIDHVKKKATSLQRVTYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 433
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQ--KLVFAGSEEGKLLALRQSFA 134
LFSAT +E LAR I+ D +RV+ G A+E + Q +++ +GS++ L R
Sbjct: 434 LFSATFRKKIERLARDILVDPIRVVQGDIGEANEDVTQVVEILLSGSDKWAWLTRRLVEF 493
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
S VLIFV K + EL L + G++H D+ Q++
Sbjct: 494 TSAG-SVLIFVTKKANSDELAANLTQEGYSLGLLHGDMDQSE 534
>gi|89052606|ref|YP_508057.1| DEAD/DEAH box helicase [Jannaschia sp. CCS1]
gi|88862155|gb|ABD53032.1| DEAD/DEAH box helicase-like protein [Jannaschia sp. CCS1]
Length = 451
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 89/164 (54%), Gaps = 7/164 (4%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL + R+ IDLS V++LVLDEAD++ ++G + L+ I P A P
Sbjct: 142 GTDILVATPGRLMDLMDRRAIDLSTVKHLVLDEADQMLDLGFIHALRKIAP---ALGTPR 198
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
LFSAT+P +EELA + + + +V V A++ + Q + F + K LR+
Sbjct: 199 QTM-LFSATMPKQMEELASAYLSNPKKVQVSPPGKAADKVTQVVHFM-PKPAKPAKLREV 256
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E + VL+F ++K ++L L D A IH + SQ Q
Sbjct: 257 LNEDPDALVLVFGRTKHGCEKLMKGLVADGYNAASIHGNKSQGQ 300
>gi|238794074|ref|ZP_04637691.1| ATP-dependent RNA helicase rhlE [Yersinia intermedia ATCC 29909]
gi|238726579|gb|EEQ18116.1| ATP-dependent RNA helicase rhlE [Yersinia intermedia ATCC 29909]
Length = 451
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 89/163 (54%), Gaps = 5/163 (3%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + +DLS++E LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 73 IVRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
++ LFSAT D ++ LA ++++ V V R+NTASE I Q + F + L L Q
Sbjct: 180 KRQNLLFSATFSDEIKGLASKLLNNPASVEVARRNTASEQIAQSVHFVDKNRKREL-LSQ 238
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
E VL+F ++K A L +L D I A IH + SQ
Sbjct: 239 MIGEGNWQQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQ 281
>gi|308186129|ref|YP_003930260.1| ATP-dependent RNA helicase rhlE [Pantoea vagans C9-1]
gi|308056639|gb|ADO08811.1| Putative ATP-dependent RNA helicase rhlE [Pantoea vagans C9-1]
Length = 456
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 88/164 (53%), Gaps = 7/164 (4%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ D+L++TP RL ++ +DLS+VE LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDVLVATPGRLLDLAQQNAVDLSQVEILVLDEADRMLDMG----FIHDIRRVLARLP 178
Query: 73 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
R LFSAT D ++ LA ++ + + V R+NTASE + Q++ F + + L L
Sbjct: 179 AKRQNLLFSATFSDEIKGLAEKLLTNPEMIEVARRNTASEQVAQQVHFVDKKRKREL-LS 237
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
Q E VL+F ++K A L +L D I A IH + SQ
Sbjct: 238 QLIGEGNWQQVLVFTRTKHGANHLAEQLGKDGITAAAIHGNKSQ 281
>gi|378731315|gb|EHY57774.1| ATP dependent RNA helicase [Exophiala dermatitidis NIH/UT8656]
Length = 692
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 95/205 (46%), Gaps = 53/205 (25%)
Query: 16 CDILISTPLRLRLAI--------RRKKIDLSRVEYLVLDEAD----KLFEVGNLLKHIDP 63
DIL+STPL L A+ + L +VE L+ DEAD LF L
Sbjct: 287 ADILVSTPLSLVHALCPSWEEDETKPPQALPKVETLIFDEADVLLDPLFRSQTLA----- 341
Query: 64 VVKACSNPSIVRSLFSATLPDFVEELARSIMHDA--------------VRVIVGRKNTAS 109
V AC++PS+ S++SAT+ +EELA S + + +R I+G K+T+
Sbjct: 342 VWSACTSPSLQISMWSATIGSNIEELAVSTISERQKRLGIPRNQRPRLLRTIIGLKDTSL 401
Query: 110 ESIKQKLVFAGSEEGKLLALRQ-----SFAESLN----------PPVLIFVQSKDRAKEL 154
+I +L + +E GKLL +RQ F + PP L+F Q+ RA+ L
Sbjct: 402 PTISHRLTYTATEAGKLLGMRQLLHPTRFTTTKGAEEDAQPPPRPPFLVFTQTIARAQSL 461
Query: 155 YGELAFD-------DIRAGVIHSDL 172
Y EL +D R V+HS L
Sbjct: 462 YDELQYDIPASAGGSSRMAVLHSSL 486
>gi|254491416|ref|ZP_05104595.1| DEAD/DEAH box helicase domain protein [Methylophaga thiooxidans
DMS010]
gi|224462894|gb|EEF79164.1| DEAD/DEAH box helicase domain protein [Methylophaga thiooxydans
DMS010]
Length = 402
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 93/165 (56%), Gaps = 11/165 (6%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
CDI+I+TP RL + ++ DLS +E++V+DEAD++ ++G + V A +
Sbjct: 122 GCDIVIATPGRLLNLVENEQADLSEIEFVVIDEADRMLDMGQGPDVAN--VLATITTAFQ 179
Query: 75 RSLFSATLPD-FVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLA--L 129
SLFSATL VE A +++ +A R+ V N ++ + Q++ A + E K LLA +
Sbjct: 180 TSLFSATLAGSGVELFANALLPNASRIEVDAANQYAQQVSQQVYLADNREHKQALLAAVI 239
Query: 130 RQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+Q+ ES LIF K+RA+E+ L +I A V+H D +Q
Sbjct: 240 KQTDCES----ALIFCNKKERAEEVSAFLQSQNISAQVVHGDFNQ 280
>gi|412988365|emb|CCO17701.1| predicted protein [Bathycoccus prasinos]
Length = 497
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 85/165 (51%), Gaps = 5/165 (3%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
CDILI+TP RL I R K+ L++ EYL LDEAD++ ++G I +V+ P
Sbjct: 178 GCDILIATPGRLIDLIDRAKVGLAKCEYLALDEADRMLDMG-FEPQIRQLVEQRDMPRTG 236
Query: 75 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
LFSAT P ++ +A +HD V + VGR +++E I Q + + S K L
Sbjct: 237 ERQTMLFSATFPKEIQRMASDFLHDYVFLTVGRVGSSTELINQTVCYVPSYYDKTQML-L 295
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E++ L+FV++K A +L L A IH D +Q +
Sbjct: 296 DLTEAVPGLTLVFVETKRGADQLEDFLCEQGKPATSIHGDRTQQE 340
>gi|302854279|ref|XP_002958649.1| hypothetical protein VOLCADRAFT_69703 [Volvox carteri f.
nagariensis]
gi|300256038|gb|EFJ40315.1| hypothetical protein VOLCADRAFT_69703 [Volvox carteri f.
nagariensis]
Length = 582
Score = 82.0 bits (201), Expect = 9e-14, Method: Composition-based stats.
Identities = 59/169 (34%), Positives = 95/169 (56%), Gaps = 16/169 (9%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSI 73
+++++TP R +++ +LSRV Y+VLDEAD++ ++G +P +K N P
Sbjct: 262 EVVVATPGRFIDLLQQSYTNLSRVSYVVLDEADRMLDMG-----FEPQIKEVMNNLPPRH 316
Query: 74 VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFA--GSEEGKLLALRQ 131
LFSAT+P +EELAR+ ++ V V +G +T + ++ Q+L A G + L+AL
Sbjct: 317 QTLLFSATMPKEIEELARAYLNKPVTVKIGAVSTPTANVAQRLEHAPEGQKLDILVALIS 376
Query: 132 S--FAE-SLNPPV---LIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
S AE S PP+ ++FV+ K+R E+ L D I A +H L Q
Sbjct: 377 SEVAAEASGGPPMPLTIVFVERKNRCDEVAAALQEDGIPANALHGGLGQ 425
>gi|444335472|ref|YP_007391841.1| ATP-dependent RNA helicase DeaD [Blattabacterium sp. (Blatta
orientalis) str. Tarazona]
gi|444299851|gb|AGD98088.1| ATP-dependent RNA helicase DeaD [Blattabacterium sp. (Blatta
orientalis) str. Tarazona]
Length = 542
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 95/162 (58%), Gaps = 9/162 (5%)
Query: 18 ILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS- 76
I++ TP R+ I RKK+ LS ++YLVLDEAD++ +G + +D ++ P +S
Sbjct: 126 IIVGTPGRIIDLIERKKLHLSDIKYLVLDEADEMLNMG-FKEELDSIIIKL--PKKRQSL 182
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
LFSAT+ ++ +A + + D + +I G++N AS+ ++ + + S + K LAL++
Sbjct: 183 LFSATMSKYMNGIAHNYLIDPIEIITGKRNFASDDVRH-IYYIVSNQNKYLALKR--IVD 239
Query: 137 LNPPV--LIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+NP + +IF +++ +E+ L D A ++ DLSQ+Q
Sbjct: 240 INPDIYGIIFCKTRKETREIAESLIQDGYNADALYGDLSQSQ 281
>gi|452837220|gb|EME39162.1| hypothetical protein DOTSEDRAFT_179601 [Dothistroma septosporum
NZE10]
Length = 689
Score = 82.0 bits (201), Expect = 9e-14, Method: Composition-based stats.
Identities = 55/166 (33%), Positives = 88/166 (53%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI-- 73
CD+L++TP RL I R +I L+ ++YLVLDEAD++ ++G I +V+ P+
Sbjct: 337 CDLLVATPGRLVDLIERGRISLANIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPATDG 395
Query: 74 -VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + + + + VGR + SE+I QK+ + + + LL +
Sbjct: 396 RQTLMFSATFPRDIQMLARDFLREYIFLSVGRVGSTSENITQKIEYVEDTDKRSVLLDIL 455
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L LIFV++K A L L A IH D +Q +
Sbjct: 456 HTHGAGL---TLIFVETKRMADSLSDYLINQGFPATSIHGDRTQRE 498
>gi|384500964|gb|EIE91455.1| hypothetical protein RO3G_16166 [Rhizopus delemar RA 99-880]
Length = 834
Score = 82.0 bits (201), Expect = 9e-14, Method: Composition-based stats.
Identities = 60/168 (35%), Positives = 89/168 (52%), Gaps = 14/168 (8%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSI 73
CD+L + P RL I R KI L RV+YLVLDEAD++ ++G ++++ I V K NP
Sbjct: 233 CDVLAAAPGRLMDFIDRGKIGLGRVKYLVLDEADRMLDMGFESIIRAI--VQKKGMNPEH 290
Query: 74 VRSLFSATLPDFVEELARSIMH-DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
L+SAT P + LAR + D + + VGR S SI Q++++ ++ R+
Sbjct: 291 QTLLYSATFPRAIRALARDFLRADYLFLKVGRVGGTSTSITQRVIYVPEDQK-----REE 345
Query: 133 FAESLN--PP--VLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
LN PP LIFV++K A L L + + IH D +Q +
Sbjct: 346 LRNLLNGLPPSRTLIFVETKRSADSLDQFLYERNFPSTSIHGDRTQME 393
>gi|332286324|ref|YP_004418235.1| ATP-dependent RNA helicase [Pusillimonas sp. T7-7]
gi|330430277|gb|AEC21611.1| putative ATP-dependent RNA helicase [Pusillimonas sp. T7-7]
Length = 477
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 91/159 (57%), Gaps = 5/159 (3%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DIL++TP RL ++K +DLS VE LVLDEAD++ ++G ++ I ++ P ++
Sbjct: 131 DILVATPGRLLDHAQQKTVDLSAVEILVLDEADRMLDMG-FIRDIRRILALL--PKQRQN 187
Query: 77 -LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 135
LFSAT D + L++ +++D + + V R+NTASE ++Q +V + L L E
Sbjct: 188 LLFSATFSDEIRALSKGVLNDPIEISVARRNTASELVEQSVVLTEQAHKRDL-LSHIIRE 246
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
S VL+F ++K A L +L D + A IH + SQ
Sbjct: 247 SGWHQVLVFTRTKHGANRLAEKLVKDGLSAAAIHGNKSQ 285
>gi|391348261|ref|XP_003748366.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Metaseiulus
occidentalis]
Length = 748
Score = 82.0 bits (201), Expect = 9e-14, Method: Composition-based stats.
Identities = 55/170 (32%), Positives = 95/170 (55%), Gaps = 15/170 (8%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSI 73
+I+++TP R+ I+ K +L RV +LVLDEAD++F++G +P V++ N P
Sbjct: 364 EIVVATPGRMIDMIKMKATNLERVTFLVLDEADRMFDMG-----FEPQVRSICNHVRPDR 418
Query: 74 VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS- 132
+FSAT +E+LAR ++ D V++I G A+E + Q ++F +E K + ++
Sbjct: 419 QCLMFSATFKKRIEKLARDVLSDPVKIIQGDVGEATEDVTQMMIFIKDKELKDIENKKFL 478
Query: 133 -FAESL-----NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
AE+L VLIFV K + + +L D + G++H D+ Q++
Sbjct: 479 WLAENLVGFCSQGSVLIFVTKKASCEIVAEKLKQRDHKLGMLHGDIDQSE 528
>gi|395532890|ref|XP_003768499.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Sarcophilus harrisii]
Length = 943
Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 53/161 (32%), Positives = 86/161 (53%), Gaps = 3/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
+I++ TP RL +++K +L RV YLV DEAD++F++G ++ + + P
Sbjct: 378 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 435
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L + E
Sbjct: 436 LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEF 495
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + VL+FV K A EL L + G++H D+ Q++
Sbjct: 496 TSSGSVLLFVTKKANADELANNLRQEGHNLGLLHGDMDQSE 536
>gi|296234835|ref|XP_002762632.1| PREDICTED: ATP-dependent RNA helicase DDX3Y [Callithrix jacchus]
Length = 656
Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 54/161 (33%), Positives = 84/161 (52%), Gaps = 2/161 (1%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
C +L++TP RL + R+KI L +YLVLDEAD++ ++G + V + C P VR
Sbjct: 313 CHLLVATPGRLVDMMERRKIALDFCKYLVLDEADRMLDMGFEPQIRRIVEQDCMPPKGVR 372
Query: 76 S--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 133
+FSAT P ++ LAR + + + + VGR + SE+I QK+V+ + + L
Sbjct: 373 HTMMFSATFPKKIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLLDLLG 432
Query: 134 AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
A + +L+FV +K L L + IH D SQ
Sbjct: 433 ATGRDSLILVFVVTKKEVDSLEEFLYHEGYACTSIHGDRSQ 473
>gi|238749853|ref|ZP_04611357.1| ATP-dependent RNA helicase rhlE [Yersinia rohdei ATCC 43380]
gi|238711782|gb|EEQ03996.1| ATP-dependent RNA helicase rhlE [Yersinia rohdei ATCC 43380]
Length = 450
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 89/163 (54%), Gaps = 5/163 (3%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + +DLS++E LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 73 IVRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
++ LFSAT D ++ LA ++++ V V R+NTASE I Q + F + L L Q
Sbjct: 180 RRQNLLFSATFSDEIKGLASKLLNNPASVEVARRNTASEQIAQSVHFVDKNRKREL-LSQ 238
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
E VL+F ++K A L +L D I A IH + SQ
Sbjct: 239 MIGEGNWQQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQ 281
>gi|330929272|ref|XP_003302577.1| hypothetical protein PTT_14452 [Pyrenophora teres f. teres 0-1]
gi|311321983|gb|EFQ89342.1| hypothetical protein PTT_14452 [Pyrenophora teres f. teres 0-1]
Length = 599
Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 53/164 (32%), Positives = 84/164 (51%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L+ ++YLVLDEAD++ ++G I +V+ P
Sbjct: 332 CDLLVATPGRLVDLIERGRISLASIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPPTAG 390
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + D + + VGR + SE+I QK+ + + + + L
Sbjct: 391 RQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGSTSENITQKIEYVEDVDKRSVLLDIL 450
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L+FV++K A L L A IH D +Q +
Sbjct: 451 HTHDPTNLTLVFVETKRMADSLSDFLINQGFPATSIHGDRTQRE 494
>gi|54302687|ref|YP_132680.1| ATP-dependent RNA helicase [Photobacterium profundum SS9]
gi|46916111|emb|CAG22880.1| putative ATP-dependent RNA helicase [Photobacterium profundum SS9]
Length = 431
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 89/161 (55%), Gaps = 3/161 (1%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
DIL++TP RL + K + L+ +E+LV DEAD++ ++G + + + +NP I+
Sbjct: 124 GVDILVATPGRLIEHVDLKNVSLANIEFLVFDEADRMLDMGFITDMRKVMGEVNTNPQIM 183
Query: 75 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
+FSAT + LA I+ R++V R+NT ++++ +V+ +E K L +
Sbjct: 184 --MFSATSSKQMNALASDILRKPKRIMVDRENTTADTVSH-VVYPVDQERKRELLSELIG 240
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
+ VL+FV K+ A EL EL D I+A + H D +Q+
Sbjct: 241 KKNWKQVLVFVNYKETANELVKELKKDGIKAVLCHGDKAQS 281
>gi|381405224|ref|ZP_09929908.1| ATP-dependent RNA helicase RhlE [Pantoea sp. Sc1]
gi|380738423|gb|EIB99486.1| ATP-dependent RNA helicase RhlE [Pantoea sp. Sc1]
Length = 453
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 87/164 (53%), Gaps = 7/164 (4%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ D+L++TP RL + +DLS+VE LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDVLVATPGRLLDLAHQNAVDLSKVEILVLDEADRMLDMG----FIHDIRRVLARLP 178
Query: 73 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
R LFSAT D ++ LA ++ + V V R+NTASE + Q++ F + + L L
Sbjct: 179 AKRQNLLFSATFSDEIKGLAEKLLTNPEMVEVARRNTASEQVAQQVHFVDKKRKREL-LS 237
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
Q E VL+F ++K A L +L D I A IH + SQ
Sbjct: 238 QLIGEGNWQQVLVFTRTKHGANHLAEQLGKDGITAAAIHGNKSQ 281
>gi|115397521|ref|XP_001214352.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192543|gb|EAU34243.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 736
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 100/184 (54%), Gaps = 29/184 (15%)
Query: 16 CDILISTPLRL--RLAIRRKK--IDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP 71
DIL++TPL L L+ R K L V +VLDEAD L + + +D + ++C++P
Sbjct: 370 SDILVTTPLLLVNALSANRTKPLAALPLVRNIVLDEADVLLDPLFREQTLD-IWRSCTHP 428
Query: 72 SIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASESIKQKLVFA 119
+ SL+SAT+ VE+LA+S + + +R++VG K++A +I+ KLV+A
Sbjct: 429 ELRASLWSATMGSNVEDLAKSTIQERKDLSGTTKSYPLIRLVVGLKDSAIPNIQHKLVYA 488
Query: 120 GSEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFD-------DIRAGVIHSDL 172
+E+ R + L PP LIF Q+ RA L+ EL +D R V+HS+L
Sbjct: 489 ATEQA-----RTATDVHLRPPFLIFTQTIPRAVALHSELLYDIPPEAGGSSRIAVLHSEL 543
Query: 173 SQTQ 176
S +Q
Sbjct: 544 SDSQ 547
>gi|407921692|gb|EKG14832.1| RNA helicase ATP-dependent DEAD-box conserved site [Macrophomina
phaseolina MS6]
Length = 680
Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI-- 73
CD+L++TP RL + R +I L ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 329 CDLLVATPGRLVDLMERGRISLQNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPPVDG 387
Query: 74 -VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + D + + VGR + SE+I QK+ + + + LL +
Sbjct: 388 RQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGSTSENITQKVEYVEDADKRSVLLDIL 447
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L LIFV++K A L L A IH D +Q +
Sbjct: 448 HTVGTGL---TLIFVETKRMADSLSDFLINQGFPATSIHGDRTQRE 490
>gi|237681149|ref|NP_001153721.1| ATP-dependent RNA helicase belle [Tribolium castaneum]
gi|270008148|gb|EFA04596.1| belle [Tribolium castaneum]
Length = 699
Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 58/175 (33%), Positives = 91/175 (52%), Gaps = 10/175 (5%)
Query: 10 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
DL + C +L++TP RL I R +I L YLVLDEAD++ ++G L+ I +V+ +
Sbjct: 341 DLDR-GCHLLVATPGRLLDMIDRGRIGLDYCRYLVLDEADRMLDMGFELQ-IRRIVEKET 398
Query: 70 NPSIVRS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 126
P +FSAT P ++ LAR + + + + VGR + SE+I QK+V+ + +
Sbjct: 399 MPKTGERQTLMFSATFPSPIQMLARDFLDNYIFLAVGRVGSTSENITQKVVWVEEHDKRS 458
Query: 127 LALRQSFAESLNPP-----VLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L A ++ P L+FV++K A L L F+ IH D SQ +
Sbjct: 459 FLLDLLNAAEMSQPSAESLTLVFVETKKGADSLEEFLHFEGYPVTSIHGDRSQRE 513
>gi|187479813|ref|YP_787838.1| ATP-dependent RNA helicase [Bordetella avium 197N]
gi|115424400|emb|CAJ50953.1| putative ATP-dependent RNA helicase [Bordetella avium 197N]
Length = 477
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 88/159 (55%), Gaps = 3/159 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DIL++TP RL +K +DLS VE LVLDEAD++ ++G ++ I V+ A S
Sbjct: 131 DILVATPGRLLDHCGQKTVDLSGVEILVLDEADRMLDMG-FIRDIRKVL-ALLPKSRQNL 188
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
LFSAT D + ELAR ++H+ V V +NTA+E + Q + + L + +ES
Sbjct: 189 LFSATFSDEIRELARGVLHNPGEVSVTPRNTATELVTQTVYLVDQAHKRDL-VSHLISES 247
Query: 137 LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
VL+F ++K A L +L D + A IH + SQ+
Sbjct: 248 GWHQVLVFTRTKHGANRLAEKLVKDGLSAAAIHGNKSQS 286
>gi|297568967|ref|YP_003690311.1| DEAD/DEAH box helicase domain protein [Desulfurivibrio alkaliphilus
AHT2]
gi|296924882|gb|ADH85692.1| DEAD/DEAH box helicase domain protein [Desulfurivibrio alkaliphilus
AHT2]
Length = 442
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 89/163 (54%), Gaps = 9/163 (5%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
DIL++TP RL + +K IDLS+VE LVLDEAD++ ++G L+ I ++ I
Sbjct: 123 GVDILVATPGRLLDHVSQKTIDLSKVEMLVLDEADRMLDMG-FLRDIRKILALL---PIQ 178
Query: 75 RS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
R LFSAT D ++ LA ++ + V R+NTA+E + Q + ++G AL
Sbjct: 179 RQNLLFSATFSDEIKRLADGLLKSPTLIEVARRNTAAEQVDQAIYRI--DKGLKRALLSH 236
Query: 133 FAESLN-PPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
N VL+F ++K A L G+LA D I + IH + SQ
Sbjct: 237 LISGQNWQQVLVFTRTKHGANRLAGQLAKDGISSTAIHGNKSQ 279
>gi|159108104|ref|XP_001704325.1| ATP-dependent RNA helicase [Giardia lamblia ATCC 50803]
gi|15213754|gb|AAK92152.1| DEAD-box RNA helicase [Giardia intestinalis]
gi|157432385|gb|EDO76651.1| ATP-dependent RNA helicase [Giardia lamblia ATCC 50803]
Length = 554
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 93/187 (49%), Gaps = 13/187 (6%)
Query: 2 KKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHI 61
+KE V + ++ D++++TPL L + + ++ +VLDE D L ++ I
Sbjct: 199 RKETVTQSLINSKRHDVMVATPLVLLNFLTEGIVRFPNLQTIVLDEVDCLMNP-QFIEQI 257
Query: 62 DPVVK-----------ACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASE 110
D V++ C V +LFSA++ D V L + + D V++ V +
Sbjct: 258 DAVLEWILKTNANTGGCCPANRPVFTLFSASVTDQVFGLVNTFLVDPVQISVAGAGMPTN 317
Query: 111 SIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGEL-AFDDIRAGVIH 169
++KQ +FAG + K+ L+Q+ E PPVL+F + DR +Y EL + D G +H
Sbjct: 318 TVKQYFMFAGRDRYKMFTLQQAIIEYGKPPVLVFASTSDRVFTIYKELICYVDWPTGYLH 377
Query: 170 SDLSQTQ 176
+ L++ Q
Sbjct: 378 AGLTKNQ 384
>gi|451998444|gb|EMD90908.1| hypothetical protein COCHEDRAFT_1176468 [Cochliobolus
heterostrophus C5]
Length = 659
Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 56/166 (33%), Positives = 88/166 (53%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L+ ++YLVLDEAD++ ++G I +V+ P
Sbjct: 309 CDLLVATPGRLVDLIERGRISLASIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPPTAG 367
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + D + + VGR + SE+I QK+ + + + LL +
Sbjct: 368 RQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGSTSENITQKIEYVEDADKRSVLLDIL 427
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L+ LIFV++K A L L A IH D +Q +
Sbjct: 428 HTHGVGLS---LIFVETKRMADSLSDFLINQGFPATSIHGDRTQRE 470
>gi|407973411|ref|ZP_11154323.1| DEAD/DEAH box helicase [Nitratireductor indicus C115]
gi|407431252|gb|EKF43924.1| DEAD/DEAH box helicase [Nitratireductor indicus C115]
Length = 473
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 91/161 (56%), Gaps = 3/161 (1%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
D+LI+TP RL +R ++ L+ +LVLDEAD++ ++G + + + +A
Sbjct: 133 GVDVLIATPGRLTDIVRSGELSLAETRWLVLDEADRMLDMG-FINDVRRIARATHTDRQT 191
Query: 75 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
+LFSAT+P +++LA S++ + +RV + R++T + IKQ L+ A + + + + L A
Sbjct: 192 -ALFSATMPKEIDQLAGSLLKEPLRVEIARESTTAGEIKQGLIMARTRQKRKI-LSDMLA 249
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
+ V++F ++K A + +L D A VIH + SQ
Sbjct: 250 DEKLRSVIVFARTKHGADRVTRDLTRDGFEAAVIHGNKSQN 290
>gi|354722649|ref|ZP_09036864.1| ATP-dependent RNA helicase RhlE [Enterobacter mori LMG 25706]
Length = 461
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 90/163 (55%), Gaps = 5/163 (3%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ D+L++TP RL + + L +VE LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 73 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
++L FSAT D ++ LA ++H+ + V V R+NTASE + Q + F + + L L Q
Sbjct: 180 RRQNLLFSATFSDEIKALAEKLLHNPLEVEVARRNTASEQVTQHVHFVDKKRKREL-LSQ 238
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ VL+F ++K A L +L D IR+ IH + SQ
Sbjct: 239 MIGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQ 281
>gi|453081962|gb|EMF10010.1| DEAD-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 679
Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 56/166 (33%), Positives = 88/166 (53%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L+ ++YLVLDEAD++ ++G I +V+ PS
Sbjct: 330 CDLLVATPGRLVDLIERGRISLANIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPSTEG 388
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + + + + VGR + SE+I QK+ + + + LL +
Sbjct: 389 RQTLMFSATFPRDIQLLARDFLREYIFLSVGRVGSTSENITQKVEYVEDIDKRSVLLDIL 448
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L LIFV++K A L L A IH D +Q +
Sbjct: 449 HTHGAGL---TLIFVETKRMADSLSDYLINQGFPATSIHGDRTQRE 491
>gi|443897680|dbj|GAC75020.1| vacuolar sorting protein VPS33/slp1, partial [Pseudozyma antarctica
T-34]
Length = 658
Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 54/164 (32%), Positives = 88/164 (53%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L +TP RL + R +I LS V +LVLDEAD++ ++G I +V+ P ++
Sbjct: 389 CDLLSATPGRLVDLMERGRISLSNVRFLVLDEADRMLDMG-FEPQIRRIVEGEDMPGVMD 447
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LA+ + + V + VGR + SE+I QK+ + ++ + + L
Sbjct: 448 RQTLMFSATFPRDIQLLAKDFLKEYVFLSVGRVGSTSENITQKIEYVEDDDKRSVLLDVL 507
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ LIFV++K A L L +I A IH D +Q +
Sbjct: 508 ASMPTGGLTLIFVETKRMADMLSDFLLRSNIAATSIHGDRTQRE 551
>gi|380471575|emb|CCF47213.1| ATP-dependent RNA helicase DED1 [Colletotrichum higginsianum]
Length = 513
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 88/165 (53%), Gaps = 9/165 (5%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P++
Sbjct: 254 GCDLLVATPGRLVDLIERGRISLQNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPNVQ 312
Query: 75 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 129
+FSAT P ++ LAR + D + + VGR + SE+I QK+ + + + LL +
Sbjct: 313 NRQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGSTSENITQKVEYVEDVDKRSVLLDI 372
Query: 130 RQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ L LIFV++K A L L + A IH D +Q
Sbjct: 373 LHTHGAGL---TLIFVETKRMADSLSDFLINQNFPATSIHGDRTQ 414
>gi|421750235|ref|ZP_16187502.1| helicase, partial [Cupriavidus necator HPC(L)]
gi|409770743|gb|EKN53287.1| helicase, partial [Cupriavidus necator HPC(L)]
Length = 423
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 100/174 (57%), Gaps = 11/174 (6%)
Query: 9 TDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKAC 68
TD + +IL++TP RL +++K ++LS+V+ LVLDEAD++ ++G L P ++
Sbjct: 139 TDALRRGVEILVATPGRLLDHVQQKSVNLSQVQMLVLDEADRMLDMGFL-----PDLQRI 193
Query: 69 SN--PSIVRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKL--VFAGS-E 122
N P+ ++ LFSAT +++LA S +H V + V R N+A+E+++Q + V G +
Sbjct: 194 INLLPAKRQTLLFSATFSPEIKKLAASYLHQPVTIEVARSNSANENVRQTVYQVQDGQKQ 253
Query: 123 EGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E + L+Q + L+ ++FV SK L L + I A IH D +QT+
Sbjct: 254 EAVVHLLKQRADQGLSRQCIVFVNSKIGCSRLARHLEREGINAAAIHGDKTQTE 307
>gi|363889113|ref|ZP_09316479.1| hypothetical protein HMPREF9628_01115 [Eubacteriaceae bacterium
CM5]
gi|361967076|gb|EHL19942.1| hypothetical protein HMPREF9628_01115 [Eubacteriaceae bacterium
CM5]
Length = 383
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 91/161 (56%), Gaps = 5/161 (3%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
+ ++++TP RL IR I++ + L++DEAD++ E G L + K N IV
Sbjct: 120 NSQLIVATPGRLLEHIRAGNINMKYIRQLIIDEADQMLEYGFLEDIVLLKDKLPDNLQIV 179
Query: 75 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
L SAT+P + +LA+ ++ + V++ + ++NT +++I+Q L+F SE+ KL L+
Sbjct: 180 --LLSATMPKPIIDLAKKLIKNPVKIDIAQENTVTDNIEQ-LIFKTSEKNKLSTLK-FVI 235
Query: 135 ESLNP-PVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
E NP +IF SK A++LY + D ++H D SQ
Sbjct: 236 EQYNPFMAIIFCNSKKNAEKLYELMGVDGYDCDILHGDFSQ 276
>gi|294880401|ref|XP_002768997.1| ATP-dependent RNA helicase ded-1, putative [Perkinsus marinus ATCC
50983]
gi|239872070|gb|EER01715.1| ATP-dependent RNA helicase ded-1, putative [Perkinsus marinus ATCC
50983]
Length = 689
Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 54/164 (32%), Positives = 88/164 (53%), Gaps = 7/164 (4%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI-- 73
CDIL++TP RL + R ++ L +++ L+ DEAD++ ++G I +V+ PS
Sbjct: 335 CDILVATPGRLSDLMERFRVSLCQIKMLIFDEADRMLDMG-FEPQIRRIVEQEDMPSSRD 393
Query: 74 --VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
++FSAT P +++LAR + + + + VGR + SIKQ + + E KL L +
Sbjct: 394 GRQSAMFSATFPKEIQQLARDFLKEYIYLTVGRVGSTHGSIKQIMRYV-DENSKLRDLYR 452
Query: 132 SFAESLNPPV-LIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
E + L+FV++K +A E+ L D A IH D SQ
Sbjct: 453 VLEEQTEEGLTLVFVETKRKADEIENMLRRDRYPATSIHGDRSQ 496
>gi|291240646|ref|XP_002740231.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked-like
[Saccoglossus kowalevskii]
Length = 694
Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 53/164 (32%), Positives = 87/164 (53%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
C +L++TP RL + R KI L +++++VLDEAD++ ++G I +V+ + P
Sbjct: 362 CHLLVATPGRLVDMMERGKIGLDQIKWVVLDEADRMLDMG-FEPQIRRIVEQDTMPKTGE 420
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + + + + VGR + S +I QK+V+ + + L
Sbjct: 421 RQMLMFSATFPKEIQILARDFLDNYIFLAVGRVGSTSVNITQKVVWVDENDKRSFLLDLL 480
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
A + L+FV++K A L L D RA IH D SQ +
Sbjct: 481 SATGSDSLTLVFVETKKGADSLEDFLYRDGHRATSIHGDRSQRE 524
>gi|298208330|ref|YP_003716509.1| ATP-dependent RNA helicase [Croceibacter atlanticus HTCC2559]
gi|83848251|gb|EAP86121.1| ATP-dependent RNA helicase, DEAD/DEAH box family protein
[Croceibacter atlanticus HTCC2559]
Length = 623
Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 54/168 (32%), Positives = 92/168 (54%), Gaps = 11/168 (6%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
K I+++TP R++ IRR +D+S ++Y VLDEAD++ +G D + + S+
Sbjct: 101 KRGAQIIVATPGRMQDMIRRGLVDISEIQYCVLDEADEMLNMG----FYDDITEILSHSP 156
Query: 73 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
+ LFSAT+P V +A+ M++ V + VG KN +E++ + G + + AL+
Sbjct: 157 EDKFTWLFSATMPKEVARIAKDFMNNPVEITVGSKNKGTENVSHEYYLVGGRD-RYKALK 215
Query: 131 QSFAESLNPPV--LIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ NP + +IF ++K +++ +L D AG IH DLSQ Q
Sbjct: 216 RLC--DANPEIFSVIFCRTKRDTQKVAEQLIQDGYSAGAIHGDLSQNQ 261
>gi|393784034|ref|ZP_10372203.1| hypothetical protein HMPREF1071_03071 [Bacteroides salyersiae
CL02T12C01]
gi|392667693|gb|EIY61200.1| hypothetical protein HMPREF1071_03071 [Bacteroides salyersiae
CL02T12C01]
Length = 415
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 91/164 (55%), Gaps = 6/164 (3%)
Query: 14 FSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI 73
D++I+TP RL + +DLS+V Y +LDEAD++ ++G + I +VK P
Sbjct: 124 LGADVVIATPGRLIAHLSLGYVDLSKVSYFILDEADRMLDMG-FYEDIMQIVKYL--PKE 180
Query: 74 VRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
++ +FSAT+P +++LA++I+++ V V + A + ++ + E KL +R
Sbjct: 181 RQTIMFSATMPAKIQQLAKTILNNPVEVKLAVSKPAEKIVQA--AYVCYENQKLGIVRSL 238
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
FAE + V+IF SK + KE+ L + G +HSDL Q Q
Sbjct: 239 FAEEVPERVIIFASSKIKVKEVAKALKMMKLNVGEMHSDLEQAQ 282
>gi|377577364|ref|ZP_09806346.1| ATP-dependent RNA helicase RhlE [Escherichia hermannii NBRC 105704]
gi|377541102|dbj|GAB51511.1| ATP-dependent RNA helicase RhlE [Escherichia hermannii NBRC 105704]
Length = 488
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 91/166 (54%), Gaps = 11/166 (6%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ D+LI+TP RL + + L +VE LVLDEAD++ ++G + H V A P
Sbjct: 123 RGGVDVLIATPGRLLDLEHQNAVKLDKVEILVLDEADRMLDMGFI--HDIRRVLAKLPPR 180
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK-LLAL-- 129
LFSAT D ++ LA ++H+ V V R+NTASE I Q + F + + LL+L
Sbjct: 181 RQNLLFSATFSDDIKSLAEKLLHNPAEVEVARRNTASEQITQYVHFVDKKRKRELLSLMI 240
Query: 130 -RQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
++++ + VL+F ++K A L +L D IR+ IH + SQ
Sbjct: 241 GKENWQQ-----VLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQ 281
>gi|448101925|ref|XP_004199679.1| Piso0_002219 [Millerozyma farinosa CBS 7064]
gi|359381101|emb|CCE81560.1| Piso0_002219 [Millerozyma farinosa CBS 7064]
Length = 548
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 93/167 (55%), Gaps = 6/167 (3%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
+++++TP RL I I+L V+YLVLDEAD++ E G + I +++ + S
Sbjct: 257 GANVVVATPGRLIDIINDGAINLGTVDYLVLDEADRMLEKG-FEQDIKTIMQNTAGASRQ 315
Query: 75 RSLFSATLPDFVEELARSIMHDAVRVIVGRKN--TASESIKQ--KLVFAGSEEGKLLA-L 129
+F+AT P V ELA S M + V+V +G ++ A++ I+Q +++ +E KLL+ L
Sbjct: 316 TVMFTATWPKEVRELASSFMKNPVKVNIGNRDELVANKRIEQIVEVIEPYHKENKLLSLL 375
Query: 130 RQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
R+ +++ N +LIF K A+ + L + IH DLSQ Q
Sbjct: 376 RKYQSKNKNDKILIFALYKKEARRIESLLQRNSFHVAAIHGDLSQQQ 422
>gi|114149265|sp|Q3MSQ8.1|DDX4_RANLE RecName: Full=Probable ATP-dependent RNA helicase DDX4; AltName:
Full=DEAD box protein 4; AltName: Full=Vasa homolog
gi|76253272|emb|CAH56439.1| DEAD box protein [Pelophylax lessonae]
Length = 724
Score = 81.3 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 55/165 (33%), Positives = 93/165 (56%), Gaps = 6/165 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
C+IL +TP RL IR++KI L+++ YLVLDEAD++ ++G + I+ ++K+ PS
Sbjct: 414 CNILCATPGRLLDVIRKEKIGLTKLRYLVLDEADRMLDMG-FREDIENLLKSSGMPSKEE 472
Query: 76 S---LFSATLPDFVEELARSIMH-DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
+FSAT P ++ LAR I+ D + V+VG+ A ++Q +V E GK L +
Sbjct: 473 RQTLMFSATFPSSIQSLAREILKPDYLFVVVGQVGGACSDVEQ-MVIEVDEFGKKDKLME 531
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E + ++FV++K +A + L + + + IH D Q +
Sbjct: 532 ILQEIGSERTMVFVKTKKKADFIATFLCQEKVPSTSIHGDREQKE 576
>gi|321476533|gb|EFX87493.1| hypothetical protein DAPPUDRAFT_306483 [Daphnia pulex]
Length = 805
Score = 81.3 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 57/173 (32%), Positives = 94/173 (54%), Gaps = 13/173 (7%)
Query: 7 RSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVK 66
+S DL + +I+++TP R+ ++ K +L RV +LVLDEAD++F++G +P V+
Sbjct: 416 QSKDLEQ-GAEIVVATPGRMIDLVKIKATNLQRVTFLVLDEADRMFDMG-----FEPQVR 469
Query: 67 ACSN---PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKL-VFAGSE 122
+ N P LFSAT +E+LAR ++ D +R++ G A++ + Q + V A +
Sbjct: 470 SICNHARPERQTLLFSATFKKRIEKLARDVLSDPIRIVQGDVGEANQDVTQVIEVIAPTA 529
Query: 123 EGKLLALRQ-SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ L R F S VLIFV K A+EL L ++ ++H D+ Q
Sbjct: 530 KYSWLITRLVEFMAS--GSVLIFVTKKANAEELSASLKSRELSVALLHGDMDQ 580
>gi|198432373|ref|XP_002121386.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 42
[Ciona intestinalis]
Length = 727
Score = 81.3 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 55/163 (33%), Positives = 87/163 (53%), Gaps = 9/163 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PS 72
C+I+++TP R+ +++K +L RV YLV DEAD++FE+G + V++ +N P
Sbjct: 367 CEIVVATPGRIIDHVKKKNTNLLRVTYLVFDEADRMFEMG-----FEYQVRSIANHVRPD 421
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKL-VFAGSEEGKLLALRQ 131
LFSAT +E LAR I+ D VR+I G A+ + Q + VF ++ LR+
Sbjct: 422 RQTLLFSATFRKRIERLARDILTDPVRIIQGDVGEANADVTQIVEVFKTADMKWKWLLRR 481
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ +L+FV K A+EL L + +IH D+ Q
Sbjct: 482 IIPFTSEGSLLVFVTKKANAEELATNLINEGHDVALIHGDMQQ 524
>gi|261749520|ref|YP_003257206.1| ATP-dependent RNA helicase [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
gi|261497613|gb|ACX84063.1| ATP-dependent RNA helicase [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
Length = 542
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 94/162 (58%), Gaps = 9/162 (5%)
Query: 18 ILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS- 76
I++ TP R+ I RKK+ LS ++YLVLDEAD++ +G + +D ++ P +S
Sbjct: 126 IIVGTPGRIIDLIERKKLHLSDIKYLVLDEADEMLNMG-FKEELDSIIIKL--PKKRQSL 182
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
LFSAT+ ++ +A + D + +I G++N AS+ ++ + + S + K LAL++
Sbjct: 183 LFSATMSKYMNGIAHDYLIDPIEIITGKRNFASDDVRH-IYYIVSNQNKYLALKRIV--D 239
Query: 137 LNPPV--LIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+NP + +IF +++ +E+ L D A ++ DLSQ+Q
Sbjct: 240 INPDIYGIIFCKTRKETREIAESLIQDGYNADALYGDLSQSQ 281
>gi|254480404|ref|ZP_05093651.1| DEAD/DEAH box helicase domain protein [marine gamma proteobacterium
HTCC2148]
gi|214038987|gb|EEB79647.1| DEAD/DEAH box helicase domain protein [marine gamma proteobacterium
HTCC2148]
Length = 429
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 91/161 (56%), Gaps = 5/161 (3%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
D++++TP RL ++++ IDLS+VE LVLDEAD++ ++G ++ I V+ A P
Sbjct: 124 GVDVVVATPGRLLDHLQQRSIDLSKVEVLVLDEADRMLDMG-FIRDIRKVLNAI--PKKR 180
Query: 75 RS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 133
++ LFSAT ++ LA +H + V +NTA+E + Q +V+ ++ K L Q
Sbjct: 181 QTLLFSATFSKEIKSLAAEFLHQPTEIQVTPQNTAAELVSQ-IVYPVDKKRKRELLSQKI 239
Query: 134 AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
E VL+F ++K A +L +L D I + IH + SQ
Sbjct: 240 GEENWQQVLVFTRTKHGANKLSEQLGKDGITSAAIHGNKSQ 280
>gi|304392205|ref|ZP_07374147.1| ATP-dependent RNA helicase RhlE [Ahrensia sp. R2A130]
gi|303296434|gb|EFL90792.1| ATP-dependent RNA helicase RhlE [Ahrensia sp. R2A130]
Length = 536
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 93/164 (56%), Gaps = 7/164 (4%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
D+L++TP RL + RK + L +YLVLDEAD++ ++G + L+ I+P++ P
Sbjct: 157 GTDVLVATPGRLLDLVDRKAVKLDTAKYLVLDEADQMLDMGFIHALRRIEPLL---GRPR 213
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
LFSAT+P VEEL++S + + R+ V R A++ ++Q + + +++ KL L +
Sbjct: 214 QT-LLFSATMPKLVEELSKSYLTNPERIEVARAGKAADKVRQSVHYIATKD-KLNLLSKL 271
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
AE + L+F ++K ++L +L A IH + SQ Q
Sbjct: 272 LAERPDDLSLVFGRTKHGCEKLMKQLVAQGFAAASIHGNKSQGQ 315
>gi|170105186|ref|XP_001883806.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164641441|gb|EDR05702.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 662
Score = 81.3 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 56/166 (33%), Positives = 90/166 (54%), Gaps = 6/166 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L +TP RL I R +I L+ ++YLVLDEAD++ ++G I +V+ PS
Sbjct: 313 CDLLSATPGRLVDLIERGRISLANIKYLVLDEADRMLDMG-FEPQIRRIVQGEDMPSTAD 371
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LA+ + D V + VGR + SE+I QK+ + + + LL +
Sbjct: 372 RQTLMFSATFPRDIQMLAKDFLKDYVFLSVGRVGSTSENITQKIEYVEDLDKRSVLLDIL 431
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
S + L+FV++K A L L +++ A IH D +Q +
Sbjct: 432 ASQPKEDLGLTLVFVETKRMADMLSDFLMGNNLPATSIHGDRTQRE 477
>gi|296273792|ref|YP_003656423.1| DEAD/DEAH box helicase [Arcobacter nitrofigilis DSM 7299]
gi|296097966|gb|ADG93916.1| DEAD/DEAH box helicase domain protein [Arcobacter nitrofigilis DSM
7299]
Length = 434
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 88/158 (55%), Gaps = 3/158 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
D+L++TP RL I+ K ++LS + +VLDEAD + E+G LK I+ + C+ +
Sbjct: 129 DVLVATPGRLIDHIKTKSVNLSSINNIVLDEADTMLEMG-FLKDIELIFSQCAKTRHI-G 186
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSAT+ +++LA+ +H V + V + +A + I+Q+ ++ E+ K+ L
Sbjct: 187 MFSATINQNIKKLAKEFLHKPVVIEVSSQRSAVDIIEQQ-IYLMDEDKKIEFLSYLIGSE 245
Query: 137 LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
VL+FV +K +A E+ + D ++ IH D+ Q
Sbjct: 246 NWEQVLVFVNTKAKADEITEQFNLDGLKTACIHGDIKQ 283
>gi|118582049|sp|Q0UWA6.1|DED1_PHANO RecName: Full=ATP-dependent RNA helicase DED1
Length = 696
Score = 81.3 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 55/166 (33%), Positives = 88/166 (53%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L+ ++YLVLDEAD++ ++G I +V+ P
Sbjct: 337 CDLLVATPGRLVDLIERGRISLASIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPPTAG 395
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + + + + VGR + SE+I QK+ + + + LL +
Sbjct: 396 RQTLMFSATFPRDIQMLARDFLKEYIFLSVGRVGSTSENITQKIEYVEDADKRSVLLDIL 455
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L+ LIFV++K A L L A IH D +Q +
Sbjct: 456 HTHGAGLS---LIFVETKRMADSLSDFLINQGFPATSIHGDRTQRE 498
>gi|296103277|ref|YP_003613423.1| putative ATP-dependent RNA helicase RhlE [Enterobacter cloacae
subsp. cloacae ATCC 13047]
gi|295057736|gb|ADF62474.1| putative ATP-dependent RNA helicase RhlE [Enterobacter cloacae
subsp. cloacae ATCC 13047]
Length = 450
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 85/162 (52%), Gaps = 3/162 (1%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ D+L++TP RL + + L VE LVLDEAD++ ++G + H V A P
Sbjct: 123 RGGVDVLVATPGRLLDLEHQNAVKLDNVEILVLDEADRMLDMGFI--HDIRRVLAKLPPR 180
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
LFSAT D ++ LA ++H+ + V V R+NTASE + Q + F + + L L
Sbjct: 181 RQNLLFSATFSDDIKALAEKLLHNPLEVEVARRNTASEQVTQHVHFVDKKRKREL-LSHM 239
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ VL+F ++K A L +L D IR+ IH + SQ
Sbjct: 240 IGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQ 281
>gi|261341381|ref|ZP_05969239.1| ATP-dependent RNA helicase RhlE [Enterobacter cancerogenus ATCC
35316]
gi|288316692|gb|EFC55630.1| ATP-dependent RNA helicase RhlE [Enterobacter cancerogenus ATCC
35316]
Length = 457
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 90/163 (55%), Gaps = 5/163 (3%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ D+L++TP RL + + L ++E LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQIEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 73 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
++L FSAT D ++ LA ++H+ + V V R+NTASE + Q + F + + L L Q
Sbjct: 180 RRQNLLFSATFSDEIKALAEKLLHNPLEVEVARRNTASEQVTQHVHFVDKKRKREL-LSQ 238
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ VL+F ++K A L +L D IR+ IH + SQ
Sbjct: 239 MIGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQ 281
>gi|429770137|ref|ZP_19302216.1| putative ATP-dependent RNA helicase RhlE [Brevundimonas diminuta
470-4]
gi|429185399|gb|EKY26379.1| putative ATP-dependent RNA helicase RhlE [Brevundimonas diminuta
470-4]
Length = 491
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 92/165 (55%), Gaps = 9/165 (5%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-PSI 73
D+L++ P RL I++K +DLS E VLDEAD++ ++G I P+ + S P+
Sbjct: 119 GLDVLVAAPGRLLDHIQQKTLDLSSTEIFVLDEADQMLDLG----FIKPIRQIVSRIPAK 174
Query: 74 VRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLA-LRQ 131
++L FSAT+P + +LA ++ D V+V V + T E IKQ +++ E+GK A L +
Sbjct: 175 RQNLFFSATMPSEIGKLAGELLKDPVKVQVTPQATTVERIKQSVIWV--EQGKKRALLTE 232
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
F+ L+F ++K A ++ L + AG IH + SQ Q
Sbjct: 233 LFSAPAYTRCLVFTKTKHGADKVAAYLEAGGVEAGAIHGNKSQPQ 277
>gi|399910751|ref|ZP_10779065.1| ATP-dependent RNA helicase RhlE [Halomonas sp. KM-1]
Length = 439
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 95/167 (56%), Gaps = 5/167 (2%)
Query: 10 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
D + D+L++TP RL ++K +DLSRVE LVLDEAD++ ++G + I V++
Sbjct: 119 DAIRPGLDVLVATPGRLLDLQQQKHVDLSRVEILVLDEADRMLDMG-FIHDIKKVLRLL- 176
Query: 70 NPSIVRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLA 128
P ++ LFSAT D ++ LA ++ + R+ V R+NT +E++ Q + E+ + L
Sbjct: 177 -PGKRQNLLFSATFSDEIQALADKLLDNPARIEVARRNTTAETVDQAIYRVDREKKREL- 234
Query: 129 LRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
L ++ VL+F ++K A L +L+ DI A IH + SQ+
Sbjct: 235 LAHLISQHGWHQVLVFTRTKHGANRLAEQLSKQDIPAMAIHGNKSQS 281
>gi|325285240|ref|YP_004261030.1| DEAD/DEAH box helicase [Cellulophaga lytica DSM 7489]
gi|324320694|gb|ADY28159.1| DEAD/DEAH box helicase domain protein [Cellulophaga lytica DSM
7489]
Length = 602
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 91/164 (55%), Gaps = 7/164 (4%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
I+++TP R++ I R +++S+++Y VLDEAD++ +G + I ++ +
Sbjct: 122 GAQIVVATPGRIKDMISRGMVNISKLDYCVLDEADEMLNMG-FYEDIKDILSNTPDEKFT 180
Query: 75 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
LFSAT+P V +A+ MH+ + VG KN + +++ + G + + AL++ A
Sbjct: 181 -WLFSATMPREVSTIAKKFMHNPQEITVGSKNAGATTVQHEYYVVGGRD-RYPALKR-LA 237
Query: 135 ESLNPPV--LIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
++ NP + ++F ++K + + +L D AG +H DLSQ Q
Sbjct: 238 DT-NPDIFSVVFCRTKRDTQRVAEKLIEDGYNAGALHGDLSQNQ 280
>gi|283784562|ref|YP_003364427.1| ATP-dependent RNA helicase [Citrobacter rodentium ICC168]
gi|282948016|emb|CBG87580.1| putative ATP-dependent RNA helicase [Citrobacter rodentium ICC168]
Length = 451
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 87/164 (53%), Gaps = 7/164 (4%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ D+L++TP RL + + L ++E LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQIEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 73 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
R LFSAT D ++ LA ++H+ + + V R+NTASE + Q + F + + L L
Sbjct: 179 AKRQNLLFSATFSDDIKRLAEKLLHNPLEIEVARRNTASEQVTQHVHFVDKKRKREL-LS 237
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
Q + VL+F ++K A L +L D IR+ IH + SQ
Sbjct: 238 QMIGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQ 281
>gi|444521450|gb|ELV13183.1| ATP-dependent RNA helicase DDX3X [Tupaia chinensis]
Length = 662
Score = 81.3 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 57/167 (34%), Positives = 86/167 (51%), Gaps = 3/167 (1%)
Query: 10 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
DL + C +L++TP RL + R KI L +YLVLDEAD++ ++G + V +
Sbjct: 312 DLER-GCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTM 370
Query: 70 NPSIVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLL 127
P VR +FSAT P ++ LAR + D + + VGR + SE+I QK+V+ + +
Sbjct: 371 PPKGVRHTMMFSATFPKEIQMLARDFLDDYIFLAVGRVGSTSENITQKVVWVEESDKRSF 430
Query: 128 ALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
L A + L+FV++K A L L + IH D SQ
Sbjct: 431 LLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQ 477
>gi|88803270|ref|ZP_01118796.1| ATP-dependent RNA helicase [Polaribacter irgensii 23-P]
gi|88780836|gb|EAR12015.1| ATP-dependent RNA helicase [Polaribacter irgensii 23-P]
Length = 609
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 92/167 (55%), Gaps = 9/167 (5%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
K I++ TP R I+R+ + L V++LVLDEAD++ +G +D V++A P
Sbjct: 120 KRGSQIVVGTPGRTVDLIKRRALKLGNVKWLVLDEADEMLNMG-FKDELDKVLEAT--PD 176
Query: 73 IVRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
++ LFSAT P VE +A++ M V + G+KN ++S+ + ++ +E + AL++
Sbjct: 177 TKQTLLFSATFPKEVESIAKNYMTKPVEITSGQKNQGADSVSHEY-YSVTERTRYPALKR 235
Query: 132 SFAESLNPPV--LIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
LNP + +IF +++ +E+ L D A +H DLSQ Q
Sbjct: 236 --IADLNPDIYAIIFCRTRRETQEVADNLIKDGYSADALHGDLSQGQ 280
>gi|363894343|ref|ZP_09321430.1| hypothetical protein HMPREF9629_01756 [Eubacteriaceae bacterium
ACC19a]
gi|361962509|gb|EHL15632.1| hypothetical protein HMPREF9629_01756 [Eubacteriaceae bacterium
ACC19a]
Length = 383
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 91/161 (56%), Gaps = 5/161 (3%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
+ ++++TP RL IR I++ + L++DEAD++ E G L + K N IV
Sbjct: 120 NSQLIVATPGRLLEHIRAGNINMKYIRQLIIDEADQMLEYGFLEDIVLLKDKLPDNLQIV 179
Query: 75 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
L SAT+P + +LA+ ++ + V++ + ++NT +++I+Q L+F SE+ KL L+
Sbjct: 180 --LLSATMPKPIIDLAKKLIKNPVKIDITQENTVTDNIEQ-LIFKTSEKNKLSTLK-FVI 235
Query: 135 ESLNP-PVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
E NP +IF SK A++LY + D ++H D SQ
Sbjct: 236 EQYNPFMAIIFCNSKKNAEKLYELMGVDGYDCDILHGDFSQ 276
>gi|261251247|ref|ZP_05943821.1| ATP-dependent RNA helicase [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|417956619|ref|ZP_12599583.1| ATP-dependent RNA helicase [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|260938120|gb|EEX94108.1| ATP-dependent RNA helicase [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|342809459|gb|EGU44578.1| ATP-dependent RNA helicase [Vibrio orientalis CIP 102891 = ATCC
33934]
Length = 419
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 87/160 (54%), Gaps = 3/160 (1%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
CDILI+TP RL + K I+L++ +YLVLDEAD++ ++G + I ++K C N
Sbjct: 128 GCDILIATPGRLLDHLFCKNINLTKTQYLVLDEADRMLDMG-FMPDIKRILKRC-NEERQ 185
Query: 75 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
FSAT ++ +A ++ + V V V N+ +E++KQ +V+ ++ K L
Sbjct: 186 TMFFSATFDKRIKTIAYKMLSEPVEVQVTPSNSTAETVKQ-MVYPVDKKRKAELLAYLIG 244
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
VL+F ++K + L EL D I+A I+ D SQ
Sbjct: 245 SRNWQQVLVFTKTKQGSDALAKELKLDGIKAASINGDKSQ 284
>gi|268565781|ref|XP_002639546.1| C. briggsae CBR-VBH-1 protein [Caenorhabditis briggsae]
Length = 638
Score = 81.3 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 58/162 (35%), Positives = 86/162 (53%), Gaps = 4/162 (2%)
Query: 18 ILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS- 76
ILI+TP RL I + I LS YLVLDEAD++ ++G I +V P R+
Sbjct: 261 ILIATPGRLIDIIEQGFIGLSGCRYLVLDEADRMLDMG-FEPQIRKIVGQGMPPKTARTT 319
Query: 77 -LFSATLPDFVEELARSIM-HDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
+FSAT P ++ LA+ + + V + VGR + SE+I+Q+L++ E + +
Sbjct: 320 AMFSATFPKEIQLLAKDFLKENYVFLAVGRVGSTSENIEQRLLWVNEMEKRQNLMDILMN 379
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E VL+FV++K A EL L IR+ IH DL Q +
Sbjct: 380 EDATNLVLVFVETKRGANELAYFLNRQQIRSVSIHGDLKQIE 421
>gi|71995514|ref|NP_001021793.1| Protein VBH-1, isoform c [Caenorhabditis elegans]
gi|373220254|emb|CCD72828.1| Protein VBH-1, isoform c [Caenorhabditis elegans]
Length = 660
Score = 81.3 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 57/162 (35%), Positives = 86/162 (53%), Gaps = 4/162 (2%)
Query: 18 ILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS- 76
ILI+TP RL I + I L+ YLVLDEAD++ ++G I +V P R+
Sbjct: 276 ILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMG-FEPQIRKIVGQGMPPKTARTT 334
Query: 77 -LFSATLPDFVEELARSIMHDA-VRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
+FSAT P ++ LA+ + D + + VGR + SE+I+Q+L++ E + +
Sbjct: 335 AMFSATFPKEIQVLAKDFLKDNYIFLAVGRVGSTSENIEQRLLWVNEMEKRSNLMEILMN 394
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E VL+FV++K A EL L IR+ IH DL Q +
Sbjct: 395 EHSENLVLVFVETKRGANELAYFLNRQQIRSVSIHGDLKQIE 436
>gi|17510307|ref|NP_491112.1| Protein VBH-1, isoform b [Caenorhabditis elegans]
gi|373220253|emb|CCD72827.1| Protein VBH-1, isoform b [Caenorhabditis elegans]
Length = 644
Score = 81.3 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 57/162 (35%), Positives = 86/162 (53%), Gaps = 4/162 (2%)
Query: 18 ILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS- 76
ILI+TP RL I + I L+ YLVLDEAD++ ++G I +V P R+
Sbjct: 260 ILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMG-FEPQIRKIVGQGMPPKTARTT 318
Query: 77 -LFSATLPDFVEELARSIMHDA-VRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
+FSAT P ++ LA+ + D + + VGR + SE+I+Q+L++ E + +
Sbjct: 319 AMFSATFPKEIQVLAKDFLKDNYIFLAVGRVGSTSENIEQRLLWVNEMEKRSNLMEILMN 378
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E VL+FV++K A EL L IR+ IH DL Q +
Sbjct: 379 EHSENLVLVFVETKRGANELAYFLNRQQIRSVSIHGDLKQIE 420
>gi|17510309|ref|NP_491113.1| Protein VBH-1, isoform a [Caenorhabditis elegans]
gi|373220252|emb|CCD72826.1| Protein VBH-1, isoform a [Caenorhabditis elegans]
Length = 641
Score = 81.3 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 57/162 (35%), Positives = 86/162 (53%), Gaps = 4/162 (2%)
Query: 18 ILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS- 76
ILI+TP RL I + I L+ YLVLDEAD++ ++G I +V P R+
Sbjct: 257 ILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMG-FEPQIRKIVGQGMPPKTARTT 315
Query: 77 -LFSATLPDFVEELARSIMHDA-VRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
+FSAT P ++ LA+ + D + + VGR + SE+I+Q+L++ E + +
Sbjct: 316 AMFSATFPKEIQVLAKDFLKDNYIFLAVGRVGSTSENIEQRLLWVNEMEKRSNLMEILMN 375
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E VL+FV++K A EL L IR+ IH DL Q +
Sbjct: 376 EHSENLVLVFVETKRGANELAYFLNRQQIRSVSIHGDLKQIE 417
>gi|384413821|ref|YP_005623183.1| putative ATP-dependent RNA helicase [Yersinia pestis biovar
Medievalis str. Harbin 35]
gi|320014325|gb|ADV97896.1| putative ATP-dependent RNA helicase [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 451
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 88/163 (53%), Gaps = 5/163 (3%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++T RL + +DLS++E LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDILVATHGRLLDLEHQNAVDLSKIEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 73 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
++L FSAT D ++ LA ++H+ V V R+NTASE I Q + F + L L Q
Sbjct: 180 KRQNLLFSATFSDEIKGLASKLLHNPASVEVARRNTASEQIAQSVHFVDKNRKREL-LSQ 238
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
E VL+F ++K A L +L D I A IH + SQ
Sbjct: 239 MIGEGNWQQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQ 281
>gi|295133956|ref|YP_003584632.1| DEAD/DEAH box helicase [Zunongwangia profunda SM-A87]
gi|294981971|gb|ADF52436.1| DeaD-like DEAD box family ATP-dependent RNA helicase [Zunongwangia
profunda SM-A87]
Length = 598
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 89/164 (54%), Gaps = 7/164 (4%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
I+++TP R++ IRRK D+S++EY VLDEAD++ +G + I ++
Sbjct: 122 GAQIIVATPGRMQDMIRRKLTDISKIEYCVLDEADEMLNMG-FYEDITAILSHTPKEKNT 180
Query: 75 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
LFSAT+P V +A+ M + V V VG KN + ++ + + + + AL++ A
Sbjct: 181 W-LFSATMPKEVATIAKKFMRNPVEVTVGSKNMGATNVSHEFYLVNARD-RYAALKR-LA 237
Query: 135 ESLNPPV--LIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
++ NP + +IF ++K +++ L D A +H DLSQ Q
Sbjct: 238 DA-NPDIFSVIFCRTKRDTQKVAERLIEDGYSAAALHGDLSQNQ 280
>gi|401625757|gb|EJS43750.1| dbp3p [Saccharomyces arboricola H-6]
Length = 517
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 88/165 (53%), Gaps = 7/165 (4%)
Query: 18 ILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 77
++++TP RL ++ +DLS+V YLVLDEAD++ E G + I +++ +
Sbjct: 228 VVVATPGRLLDLLQEGSVDLSQVNYLVLDEADRMLEKG-FEEDIKNIIRETDASKRQTLM 286
Query: 78 FSATLPDFVEELARSIMHDAVRVIVGRKN--TASESIKQ--KLVFAGSEEGKLLALRQSF 133
F+AT P V ELA + M++ +RV +G + TA++ I Q ++V +E KLL L + +
Sbjct: 287 FTATWPKEVRELASTFMNNPIRVSIGNTDQLTANKKITQIVEVVDPRGKERKLLELLKKY 346
Query: 134 --AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
N VLIF K A + L ++ IH DLSQ Q
Sbjct: 347 HSGPKKNEKVLIFALYKKEAARVERNLKYNGYSVAAIHGDLSQQQ 391
>gi|66805957|ref|XP_636700.1| hypothetical protein DDB_G0288501 [Dictyostelium discoideum AX4]
gi|74896924|sp|Q54IV3.1|DDX42_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx42; AltName:
Full=DEAD box protein 42
gi|60465098|gb|EAL63199.1| hypothetical protein DDB_G0288501 [Dictyostelium discoideum AX4]
Length = 986
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 87/169 (51%), Gaps = 15/169 (8%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG------NLLKHIDPVVK 66
K C+I+++TP RL I+ K L+RV YLVLDEADK+F+ G +++ H+ P +
Sbjct: 426 KAGCEIIVATPGRLIDMIKLKATKLNRVSYLVLDEADKMFDFGFGPQVLSIVNHVRPDRQ 485
Query: 67 ACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 126
LFSAT VEE AR+I+ D +++ +G +A+ I Q + S+ K
Sbjct: 486 TL--------LFSATFKPNVEEFARTILSDPIKISIGMIGSANSDITQIVQVLKSDSDKW 537
Query: 127 LALRQSFAESLNP-PVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
L A L+ VLIFV +K ++L L + +H D +Q
Sbjct: 538 NWLTNQLALLLSQGSVLIFVSTKVAVEQLSSNLTKFGFQTCTLHGDKNQ 586
>gi|348509262|ref|XP_003442169.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Oreochromis
niloticus]
Length = 909
Score = 81.3 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 53/162 (32%), Positives = 88/162 (54%), Gaps = 5/162 (3%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
+I++ TP RL +++K L RV YLV DEAD++F++G ++ + + P
Sbjct: 377 EIVVCTPGRLIDHVKKKATSLQRVTYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 434
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQ--KLVFAGSEEGKLLALRQSFA 134
LFSAT +E LAR I+ D +RV+ G A+E + Q +++ +GS++ L R+
Sbjct: 435 LFSATFRKKIERLARDILVDPIRVVQGDIGEANEDVTQVVEMLVSGSDKWGWLT-RRLVE 493
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ VLIFV K +EL L + G++H D+ Q++
Sbjct: 494 FTSTGSVLIFVTKKANCEELATNLNQEGYSLGLLHGDMDQSE 535
>gi|329954895|ref|ZP_08295912.1| DEAD/DEAH box helicase [Bacteroides clarus YIT 12056]
gi|328526999|gb|EGF54010.1| DEAD/DEAH box helicase [Bacteroides clarus YIT 12056]
Length = 499
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 88/164 (53%), Gaps = 6/164 (3%)
Query: 14 FSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI 73
D++I+TP RL + +DLSRV Y +LDEAD++ ++G I +VK P
Sbjct: 188 LGADVVIATPGRLIAHLSLGYVDLSRVSYFILDEADRMLDMG-FYDDIMQIVKYL--PKE 244
Query: 74 VRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
++ +FSAT+P +++LA+SI++D V + A + ++ + E KL +R
Sbjct: 245 RQTIMFSATMPAKIQQLAQSILNDPAEVKLAVSKPAEKIVQA--AYVCYENQKLGIIRSL 302
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
FAE V+IF SK + KE+ L + G +HSDL Q Q
Sbjct: 303 FAEQTPERVIIFASSKLKVKEVTKALKQMKLNVGEMHSDLEQAQ 346
>gi|384484459|gb|EIE76639.1| hypothetical protein RO3G_01343 [Rhizopus delemar RA 99-880]
Length = 717
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 62/168 (36%), Positives = 91/168 (54%), Gaps = 14/168 (8%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSI 73
CDIL ++P RL I R KI L RV+YL++DEAD++ ++G +++ I V K NP
Sbjct: 228 CDILAASPGRLMDFIDRGKIGLDRVKYLIIDEADRMLDMGFEAVIRAI--VQKKNMNPEH 285
Query: 74 VRSLFSATLPDFVEELARSIMH-DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
L+SAT P + LAR + D + + VGR S SI Q++++ SE+ K R++
Sbjct: 286 QTLLYSATFPRAIRALARDFLRADYLFLKVGRVGGTSTSITQRVIYV-SEDQK----RET 340
Query: 133 FAESLN--PP--VLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
LN PP LIFV++K A L L + IH D +Q +
Sbjct: 341 LRNLLNGLPPSRTLIFVETKRSADSLDQFLYERSFPSTSIHGDRTQME 388
>gi|325185113|emb|CCA19605.1| DEAD/DEAH box RNA helicase putative [Albugo laibachii Nc14]
Length = 711
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 90/167 (53%), Gaps = 15/167 (8%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG------NLLKHIDPVVKAC 68
++LI+TP RL IR+K I +RV ++VLDEAD++FE+G ++L + P ++
Sbjct: 306 GAEVLIATPGRLIELIRKKTIKTNRVTFVVLDEADRMFELGFESQLRSMLGQLRPDRQSL 365
Query: 69 SNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLA 128
LFSAT +E+LAR+I+H+ ++V VG+ A+E I Q V + K
Sbjct: 366 --------LFSATFRPRIEQLARAILHNPIKVTVGKAGQANEVISQIPVVLLNHGKKWEW 417
Query: 129 LRQSFAESLNPP-VLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
L ++ ++ VLIF SK +EL L R ++H D SQ
Sbjct: 418 LMKNLERIVDQGRVLIFANSKVGCEELSKNLDAMHYRCCLLHGDKSQ 464
>gi|444726996|gb|ELW67506.1| ATP-dependent RNA helicase DDX42 [Tupaia chinensis]
Length = 939
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 53/161 (32%), Positives = 83/161 (51%), Gaps = 19/161 (11%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
+I++ TP RL +++K +L RV YLV DEAD++F++G L
Sbjct: 274 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFAL------------------ 315
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 135
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L + E
Sbjct: 316 LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEF 375
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + VL+FV K A+EL L + G++H D+ Q++
Sbjct: 376 TSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSE 416
>gi|354603350|ref|ZP_09021349.1| hypothetical protein HMPREF9450_00264 [Alistipes indistinctus YIT
12060]
gi|353349227|gb|EHB93493.1| hypothetical protein HMPREF9450_00264 [Alistipes indistinctus YIT
12060]
Length = 489
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
DI+++TP RL I IDLS V Y VLDEAD++ ++G D ++K
Sbjct: 125 GSDIVVATPGRLLAHIANSGIDLSHVSYFVLDEADRMLDMG----FFDDIMKIIKELPTE 180
Query: 75 RS--LFSATLPDFVEELARSIMHDA--VRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
R +FSATLP + ++A+ I+ + V + V + N E+I+Q ++ E K+ +R
Sbjct: 181 RQTIMFSATLPPKIRQMAKQILRNPAEVNIAVSKPN---EAIQQG-IYVCYENQKMEIVR 236
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
F E +IF SK + KEL L + A +HSDL Q Q
Sbjct: 237 ALFGEPTGTKTIIFSSSKQKVKELAYTLKRMKLNAAAMHSDLEQEQ 282
>gi|401762889|ref|YP_006577896.1| ATP-dependent RNA helicase RhlE [Enterobacter cloacae subsp.
cloacae ENHKU01]
gi|400174423|gb|AFP69272.1| ATP-dependent RNA helicase RhlE [Enterobacter cloacae subsp.
cloacae ENHKU01]
Length = 460
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 90/163 (55%), Gaps = 5/163 (3%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ D+L++TP RL + + L ++E LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQIEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 73 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
++L FSAT D ++ LA ++H+ + V V R+NTASE + Q + F + + L L Q
Sbjct: 180 RRQNLLFSATFSDEIKALAEKLLHNPLEVEVARRNTASEQVTQHVHFVDKKRKREL-LSQ 238
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ VL+F ++K A L +L D IR+ IH + SQ
Sbjct: 239 MIGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQ 281
>gi|380004258|gb|AFD28592.1| PL10, partial [Clytia hemisphaerica]
Length = 451
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 85/165 (51%), Gaps = 6/165 (3%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
C +L+ TP RL I+R KI L V++L LDEAD++ ++G I +V+ C P
Sbjct: 88 GCHLLVGTPGRLVDMIQRGKIGLECVQFLCLDEADRMLDMG-FEPQIREIVEKCDMPVTG 146
Query: 75 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
+ +FSAT P ++ LAR + + + + VGR + SE+I QK+V+ + + L
Sbjct: 147 QRQTLMFSATFPKEIQMLARDFLDNYIFLAVGRVGSTSENITQKVVWVEEHDKREFLLDL 206
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAF--DDIRAGVIHSDLSQ 174
A + L+FV++K A L L D+ R IH D Q
Sbjct: 207 LNASGPDSLTLVFVETKRGADALEHFLVSCPDNYRVSSIHGDRHQ 251
>gi|328769192|gb|EGF79236.1| hypothetical protein BATDEDRAFT_35392 [Batrachochytrium
dendrobatidis JAM81]
Length = 647
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 59/177 (33%), Positives = 93/177 (52%), Gaps = 12/177 (6%)
Query: 10 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
DL + C +L++TP RL + R ++ L+ + YLVLDEAD++ ++G I +V+
Sbjct: 303 DLER-GCQLLVATPGRLVDLMERGRVSLASIRYLVLDEADRMLDMG-FEPQIRQIVQQAD 360
Query: 70 NPSIVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--- 125
P+ ++L FSAT P ++ LAR +HD V + VGR + SE+I Q + + +
Sbjct: 361 MPTDRQTLMFSATFPRNIQMLARDFLHDYVFIAVGRVGSTSENITQNIEMVEDVDKRSVL 420
Query: 126 --LLALRQSFA-ESLNPP---VLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+LA A ES +P L+FV++K A L L A IH D +Q +
Sbjct: 421 LDILATDAGIAQESPDPAANLTLVFVETKRGADMLCNFLIDQRFPATAIHGDRTQRE 477
>gi|300722435|ref|YP_003711723.1| ATP-dependent RNA helicase with P-loop hydrolase domain
[Xenorhabdus nematophila ATCC 19061]
gi|297628940|emb|CBJ89523.1| putative ATP-dependent RNA helicase with P-loop hydrolase domain
[Xenorhabdus nematophila ATCC 19061]
Length = 498
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 95/167 (56%), Gaps = 13/167 (7%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + +DLS VE L+LDEAD++ ++G + I ++ P+
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVDLSHVEILILDEADRMLDMG-FIHDIRRILNKL--PA 179
Query: 73 IVRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSE-EGKLLAL- 129
++ LFSAT D ++ LA +++D V V V R+N+ASE I Q + F + +G+LL+
Sbjct: 180 KRQNLLFSATFSDEIKNLANKLLNDPVSVEVARRNSASEQIAQSIHFVDKKRKGELLSYM 239
Query: 130 --RQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
Q++ + VL+F ++K A +L L D + A IH + SQ
Sbjct: 240 IGSQNWQQ-----VLVFTRTKHGANKLAELLNKDGVTAAAIHGNKSQ 281
>gi|242093508|ref|XP_002437244.1| hypothetical protein SORBIDRAFT_10g023440 [Sorghum bicolor]
gi|241915467|gb|EER88611.1| hypothetical protein SORBIDRAFT_10g023440 [Sorghum bicolor]
Length = 567
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 57/171 (33%), Positives = 91/171 (53%), Gaps = 12/171 (7%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP-SIVR 75
D+L++TP RL + R +I L ++YLV+DEAD++ ++G I +V + P VR
Sbjct: 196 DLLVATPGRLVDMVERSRISLEGIKYLVMDEADRMLDMG-FEPQIRKIVDMMNMPKKSVR 254
Query: 76 S--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFA--GSEEGKLLALRQ 131
LFSAT P ++ LA +++ + V VGR ++++ I+QKL F G + G L+ L Q
Sbjct: 255 QTMLFSATFPPEIQRLASDFLYNYIFVTVGRVGSSTDLIEQKLEFVNDGEKRGFLIDLLQ 314
Query: 132 SFAESL------NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + P L+FV++K A L L A IH D +Q +
Sbjct: 315 KQSAGVANSKLQQPLTLVFVETKREADSLRYFLQSKGFPATAIHGDRTQQE 365
>gi|440638517|gb|ELR08436.1| hypothetical protein GMDG_00500 [Geomyces destructans 20631-21]
Length = 736
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 50/201 (24%)
Query: 16 CDILISTPLRLRLAIRRK----KIDLSRVEYLVLDEADKLFEVGNLLKHIDP-------- 63
DIL++TPL L A+ + ++ L V +L+LDEAD L +DP
Sbjct: 355 ADILVTTPLILLHALTKPGSKDRLPLETVCHLILDEADVL---------LDPLFRDQTLG 405
Query: 64 VVKACSNPSIVRSLFSATLPDFVEELARSIM-----------HDAVRVIVGRKNTASESI 112
+ ++C +P + SL+SAT+ +E LA S + VR+++G K++A +I
Sbjct: 406 IWESCVSPLLHVSLWSATMGSSIETLAVSTISSRRERLSLPAQPLVRLVIGLKDSAIPNI 465
Query: 113 KQKLVFAGSEEGKLLALRQSFAES-----------LNPPVLIFVQSKDRAKELYGELAFD 161
L++A +E GKL+ LRQ + L PP L+F Q+ RA L+ EL +D
Sbjct: 466 THHLIYAATEPGKLIGLRQLLHPTSPCLASPSDPKLRPPFLVFTQTIPRAIALHSELLYD 525
Query: 162 -------DIRAGVIHSDLSQT 175
R V+HSDLS +
Sbjct: 526 IPAEAGGSSRLAVLHSDLSDS 546
>gi|343515522|ref|ZP_08752575.1| putative ATP-dependent RNA helicase [Vibrio sp. N418]
gi|342798212|gb|EGU33838.1| putative ATP-dependent RNA helicase [Vibrio sp. N418]
Length = 426
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 89/164 (54%), Gaps = 5/164 (3%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKAC-SNP 71
+ DIL++TP RL + K + L +E+LV DEAD++ ++G + I+ +++ + P
Sbjct: 122 ELGVDILVATPGRLIEHLELKNVSLVNLEFLVFDEADRMLDMG-FISAIEKIMQGVKTKP 180
Query: 72 SIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
+ LFSAT + +LA I+ R+ V R+NT +E+I +V+ +E K L +
Sbjct: 181 QTM--LFSATFSAQMNKLAGEILRAPKRIAVARENTTAETIAH-VVYPVEQERKRELLSE 237
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
VL+FV K+ A EL EL D I+A + H D +Q+
Sbjct: 238 LIGRKNWKQVLVFVNYKETANELVKELKLDGIKAVLCHGDKAQS 281
>gi|443924399|gb|ELU43422.1| ATP-dependent RNA helicase ded-1 [Rhizoctonia solani AG-1 IA]
Length = 274
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 88/163 (53%), Gaps = 4/163 (2%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
CD+L +TP RL I R +I L+ V+YLVLDEAD++ ++G I +V+ P ++
Sbjct: 41 GCDLLSATPGRLVDLIERGRISLANVQYLVLDEADRMLDMG-FEPQIRRIVQGEDMPGVM 99
Query: 75 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
+FSAT P ++ LA+ + + + + VGR + SE+I QK+ + ++ + + L
Sbjct: 100 DRQTLMFSATFPRDIQLLAKDFLKEYIFLSVGRVGSTSENITQKIEYVEDQDKRSVLLDI 159
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+E L+FV++K A L L + A IH D +Q
Sbjct: 160 LHSEPQGGLTLVFVETKRMADMLSEYLMNNRFPATSIHGDRTQ 202
>gi|374367571|ref|ZP_09625632.1| helicase [Cupriavidus basilensis OR16]
gi|373100874|gb|EHP41934.1| helicase [Cupriavidus basilensis OR16]
Length = 496
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 101/174 (58%), Gaps = 11/174 (6%)
Query: 9 TDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKAC 68
T+ + +IL++TP RL +++K ++LS+V+ LVLDEAD++ ++G L P ++
Sbjct: 133 TEALRRGVEILVATPGRLLDHVQQKSVNLSQVQMLVLDEADRMLDMGFL-----PDLQRI 187
Query: 69 SN--PSIVRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKL--VFAGSEE 123
N P+ ++ LFSAT ++ LA S +H V + V R N+A+E+++Q + V G ++
Sbjct: 188 INLLPAQRQTLLFSATFSSEIKRLAASYLHQPVTIEVARSNSANENVRQTVFQVEDGHKQ 247
Query: 124 GKLLA-LRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
++ L++ AE L+ ++FV SK L L + I A IH D +QT+
Sbjct: 248 AAVVHLLKKRAAEGLSRQCIVFVNSKIGCSRLARHLEREGINAAAIHGDKTQTE 301
>gi|389873083|ref|YP_006380502.1| ATP-dependent RNA helicase [Advenella kashmirensis WT001]
gi|388538332|gb|AFK63520.1| ATP-dependent RNA helicase [Advenella kashmirensis WT001]
Length = 476
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 89/162 (54%), Gaps = 3/162 (1%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
C++LI+TP RL I +K + LS+V LVLDEAD++ ++G L ++ +V+ P
Sbjct: 142 GCELLIATPGRLLDHIEQKNVSLSQVSVLVLDEADRMLDMG-FLPDLERIVRLLPKPR-Q 199
Query: 75 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
LFSAT + + +LARS +++ V + V +N +E++ Q E K L +
Sbjct: 200 SLLFSATFSNDIRKLARSFLNNPVEINVAPRNATAETVTQIAYPVAPNEKKAAVLYTLKS 259
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+L+ V++FV +K A + EL + I A IH D SQ +
Sbjct: 260 RNLS-QVIVFVNTKIGASRVARELVSEGINAESIHGDRSQAE 300
>gi|295101226|emb|CBK98771.1| Superfamily II DNA and RNA helicases [Faecalibacterium prausnitzii
L2-6]
Length = 648
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 60/164 (36%), Positives = 86/164 (52%), Gaps = 11/164 (6%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DILI+ P RL I + IDLS +E VLDEAD++ ++G + V K + R
Sbjct: 125 DILIACPGRLNDLIGQGHIDLSNLEVFVLDEADRMLDMG----FVHDVKKVIAKLPAKRQ 180
Query: 77 --LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
+FSAT+P +E+LA I+HD V V ++ E I Q L F E+G L
Sbjct: 181 NLMFSATMPKEIEQLAAGILHDPAFVKVDPVSSTVERIDQSLYFV--EKGNKKLLLPWLI 238
Query: 135 ESLNPPV---LIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
++L PPV L+F ++K A ++ +L I A IH + SQT
Sbjct: 239 KNLTPPVQNALVFSRTKHGADKIARDLTKQGITAAAIHGNKSQT 282
>gi|149199772|ref|ZP_01876803.1| DEAD/DEAH box helicase-like protein [Lentisphaera araneosa
HTCC2155]
gi|149137177|gb|EDM25599.1| DEAD/DEAH box helicase-like protein [Lentisphaera araneosa
HTCC2155]
Length = 437
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 89/162 (54%), Gaps = 5/162 (3%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
DI++ TP RL +K +DLSR+EYL+LDEAD++ ++G + I ++K P
Sbjct: 123 GVDIVVGTPGRLLDLAGQKALDLSRIEYLILDEADRMLDMG-FIHDIKKIIKLV--PEKR 179
Query: 75 RSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 133
++L FSAT ++ L+ SI+ + V V R+NT++E++ Q + G + + L L
Sbjct: 180 QTLFFSATYSKDIKALSESILRNPSLVEVARQNTSAETVDQSVYHVGKNKKRNL-LSSLI 238
Query: 134 AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
+ VL+F ++K A +L L D I A IH + SQ
Sbjct: 239 RDGEWNQVLVFTRTKHGANKLTNMLIADGITAAAIHGNKSQN 280
>gi|429864030|gb|ELA38415.1| ATP-dependent RNA helicase rok1 [Colletotrichum gloeosporioides
Nara gc5]
Length = 707
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 92/191 (48%), Gaps = 42/191 (21%)
Query: 16 CDILISTPLRL----RLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVK----- 66
DIL++TP L + ++ L V+ L+LDEAD L +DP+ +
Sbjct: 343 ADILVTTPTLLVNFLSSGSSKTQLVLPTVKSLILDEADVL---------LDPLFREQTMT 393
Query: 67 ---ACSNPSIVRSLFSATLPDFVEELARSIMHDA------VRVIVGRKNTASESIKQKLV 117
ACSNP + + +SAT +E L + + + +R++VG K+TA ++ KLV
Sbjct: 394 IWTACSNPDLKITFWSATFGSNIETLVKEMQAERASNRPLLRLVVGLKDTAVPNVTHKLV 453
Query: 118 FAGSEEGKLLALRQ--------SFAESLNPPVLIFVQSKDRAKELYGELAFD-------D 162
+ +E+GKLL LRQ L PP L+F Q+ +RA L EL +D
Sbjct: 454 YTATEKGKLLGLRQLLHPTAGDDSGPPLRPPFLVFTQTIERATALAEELKYDIPLAAGGS 513
Query: 163 IRAGVIHSDLS 173
R +HS L+
Sbjct: 514 TRIAALHSGLT 524
>gi|367016443|ref|XP_003682720.1| hypothetical protein TDEL_0G01420 [Torulaspora delbrueckii]
gi|359750383|emb|CCE93509.1| hypothetical protein TDEL_0G01420 [Torulaspora delbrueckii]
Length = 512
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 90/167 (53%), Gaps = 7/167 (4%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
++++TP RL ++ +DLS V YLVLDEAD++ E G + I ++++ + S
Sbjct: 221 AQVVVATPGRLLDLMQEGSVDLSNVSYLVLDEADRMLEKG-FEEDIKNIIRSTNTSSRQT 279
Query: 76 SLFSATLPDFVEELARSIMHDAVRVIVGRKN--TASESIKQ--KLVFAGSEEGKLLALRQ 131
+F+AT P V ELA + M D V+V +G ++ +A++ I Q +++ +E KLL L +
Sbjct: 280 LMFTATWPKEVRELASTFMSDPVKVSIGNRDELSANKRITQVVEVIDQFQKERKLLELLK 339
Query: 132 SF--AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + VLIF K A + L ++ IH DLSQ Q
Sbjct: 340 KYQSGPKKDEKVLIFALYKKEATRVERNLKYNGYNVAAIHGDLSQQQ 386
>gi|77362320|ref|YP_341894.1| ATP-dependent RNA helicase [Pseudoalteromonas haloplanktis TAC125]
gi|76877231|emb|CAI89448.1| putative ATP-dependent RNA helicase with P-loop hydrolase domain;
DEAD-box protein family [Pseudoalteromonas haloplanktis
TAC125]
Length = 433
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 89/162 (54%), Gaps = 3/162 (1%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
K DI+++TP RL IR + L+ V++LVLDEAD++ ++G ++ + V+K+C++
Sbjct: 121 KEGVDIVVATPGRLLDHIRLGNLSLASVKHLVLDEADRMLDMG-FIEEMQGVIKSCADDR 179
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ LFSAT P +++ A ++ V V + N+ + ++ +V+ E K L +
Sbjct: 180 QIL-LFSATFPAAIKQFASKVLKQPEIVRVDQTNSTASTVAH-VVYPVEERRKQELLSEL 237
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ VL+FV K+ A EL EL D I A V H D SQ
Sbjct: 238 IGKKNWQQVLVFVNMKETADELVTELNLDGIPAAVCHGDKSQ 279
>gi|419957755|ref|ZP_14473821.1| ATP-dependent RNA helicase RhlE [Enterobacter cloacae subsp.
cloacae GS1]
gi|388607913|gb|EIM37117.1| ATP-dependent RNA helicase RhlE [Enterobacter cloacae subsp.
cloacae GS1]
Length = 460
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 86/164 (52%), Gaps = 7/164 (4%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ D+L++TP RL + + L +E LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDVLVATPGRLLDLEHQNAVKLDNIEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 73 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
R LFSAT D ++ LA ++H+ + V V R+NTASE + Q + F + + L L
Sbjct: 179 TRRQNLLFSATFSDEIKALAEKLLHNPLEVEVARRNTASEQVTQHVHFVDKKRKREL-LS 237
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
Q + VL+F ++K A L +L D IR+ IH + SQ
Sbjct: 238 QMIGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQ 281
>gi|449295189|gb|EMC91211.1| hypothetical protein BAUCODRAFT_80455, partial [Baudoinia
compniacensis UAMH 10762]
Length = 589
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 55/166 (33%), Positives = 89/166 (53%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP---S 72
CD+L++TP RL I R +I L+ ++YL+LDEAD++ ++G I +V+ P S
Sbjct: 246 CDLLVATPGRLVDLIERGRISLANIKYLILDEADRMLDMG-FEPQIRRIVEGEDMPRTDS 304
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + + + + VGR + SE+I QK+ + + + LL +
Sbjct: 305 RQTLMFSATFPRDIQLLARDFLREYIFLSVGRVGSTSENITQKIEYVEDIDKRSVLLDIL 364
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L LIFV++K A L L + A IH D +Q +
Sbjct: 365 HTHGAGL---TLIFVETKRMADSLSDFLINQNFPATSIHGDRTQRE 407
>gi|10039327|dbj|BAB13306.1| PL10-related protein CnPL10 [Hydra vulgaris]
Length = 628
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 52/167 (31%), Positives = 88/167 (52%), Gaps = 8/167 (4%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
C +L++TP RL I+R K+ L +++LVLDEAD++ ++G I +V+ C P
Sbjct: 305 CHLLVATPGRLVDMIQRGKVGLECIKFLVLDEADRMLDMG-FEPQIREIVEKCDMPRTGE 363
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + + + + VGR + SE+I QK+V+ + + L
Sbjct: 364 RQTLMFSATFPKEIQMLARDFLDNYIFLAVGRVGSTSENITQKVVWVEEHDKREFLLDLL 423
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAF---DDIRAGVIHSDLSQTQ 176
A + L+FV++K R + + F ++ A IH D Q +
Sbjct: 424 NASGPDSLTLVFVETK-RGADALEQFLFRCPENYHATSIHGDRHQRE 469
>gi|238753347|ref|ZP_04614710.1| ATP-dependent RNA helicase rhlE [Yersinia ruckeri ATCC 29473]
gi|238708300|gb|EEQ00655.1| ATP-dependent RNA helicase rhlE [Yersinia ruckeri ATCC 29473]
Length = 453
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 88/163 (53%), Gaps = 5/163 (3%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + +DLS++E LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 73 IVRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
++ LFSAT D ++ LA ++++ V V R+NTASE I Q + F + L L Q
Sbjct: 180 KRQNLLFSATFSDEIKGLASKLLNNPASVEVARRNTASEQITQSVHFVDKNRKREL-LSQ 238
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
VL+F ++K A L +L D I A IH + SQ
Sbjct: 239 MIGSQNWQQVLVFTRTKHGANHLAEQLNKDGITAAAIHGNKSQ 281
>gi|283769405|ref|ZP_06342304.1| putative ATP-dependent RNA helicase RhlE [Bulleidia extructa W1219]
gi|283104062|gb|EFC05446.1| putative ATP-dependent RNA helicase RhlE [Bulleidia extructa W1219]
Length = 425
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 87/162 (53%), Gaps = 3/162 (1%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
CDILI+TP RL + KI L +E+LVLDEAD++ ++G + + +V+ N I
Sbjct: 120 GCDILIATPGRLLDYLAHGKISLRHIEFLVLDEADRMLDMG-FIADVRKIVQQIPNDRIT 178
Query: 75 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
+LFSAT+P ++ELAR I+ + V + + + +I Q L++ K + +
Sbjct: 179 -ALFSATMPKEIQELARDILKNPKEVRIEAEKFTASTIDQYLIYTEKSSKKKVLVNLLNT 237
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
ES+ ++F ++K A L L +I VIH D +Q Q
Sbjct: 238 ESIK-KTIVFTRTKIGADRLEKYLKEKEIACLVIHGDKTQGQ 278
>gi|85114733|ref|XP_964745.1| hypothetical protein NCU00919 [Neurospora crassa OR74A]
gi|74629077|sp|Q7SFC8.1|ROK1_NEUCR RecName: Full=ATP-dependent RNA helicase rok-1
gi|28926538|gb|EAA35509.1| conserved hypothetical protein [Neurospora crassa OR74A]
gi|38567296|emb|CAE76585.1| related to ATP-dependent RNA helicase ROK1 [Neurospora crassa]
Length = 781
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 96/193 (49%), Gaps = 38/193 (19%)
Query: 17 DILISTPLRL----------RLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVK 66
DIL++TP L + R K L V+ L+LDEAD L + K + +
Sbjct: 395 DILVTTPKILLNFLCGGEKEKGKPRIIKKTLPTVQSLILDEADVLLDP-IFRKQTMGIWR 453
Query: 67 ACSNPSIVRSLFSATLPDFVEEL------------ARSIMHDAVRVIVGRKNTASESIKQ 114
AC++P++ + +SAT+ +E L +R++VG K+TA +I
Sbjct: 454 ACTHPNLGMTCWSATMASNIEALLTKHIDKRAKRTPEQTPKPLIRLVVGLKDTAVPNITH 513
Query: 115 KLVFAGSEEGKLLALRQ-----SFAES---LNPPVLIFVQSKDRAKELYGELAFD----- 161
KL++ +E GKLLALRQ S A+S L PP L+F Q+ +RA+ L+ EL +D
Sbjct: 514 KLIYTATEPGKLLALRQLLHPVSSADSGPPLRPPFLVFTQTIERAQALHDELKYDIPLEA 573
Query: 162 --DIRAGVIHSDL 172
R V+HS L
Sbjct: 574 GGSARVAVLHSSL 586
>gi|294142025|ref|YP_003558003.1| DEAD/DEAH box helicase [Shewanella violacea DSS12]
gi|293328494|dbj|BAJ03225.1| ATP-dependent RNA helicase, DEAD box family [Shewanella violacea
DSS12]
Length = 427
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 91/162 (56%), Gaps = 7/162 (4%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
DIL++TP RL +RR ++L+++E+LV DEAD++ ++G ID +VK P
Sbjct: 142 GVDILVATPGRLLDHLRRGSLNLNQLEFLVFDEADRMLDMG-FKDEIDAIVKQL--PKTR 198
Query: 75 RS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 133
++ LFSAT + + L++S++ D ++ VG +N A+ I Q++ S+ + LAL
Sbjct: 199 QTLLFSATFDESIYGLSQSLLRDPKQIEVGERNAAAVEIDQRVYAVDSD--RKLALVTHL 256
Query: 134 AESLN-PPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
ES N VLIF + K A +L L I A H DLSQ
Sbjct: 257 IESGNLQQVLIFSRKKLAADKLAANLTKAGISAQAFHGDLSQ 298
>gi|348536964|ref|XP_003455965.1| PREDICTED: putative ATP-dependent RNA helicase an3-like
[Oreochromis niloticus]
Length = 704
Score = 80.5 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 3/167 (1%)
Query: 10 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
DL + C +L++TP RL + R KI L YLVLDEAD++ ++G + V +
Sbjct: 358 DLER-GCHLLVATPGRLVDMMERGKIGLDYCNYLVLDEADRMLDMGFEPQIRRIVEQDTM 416
Query: 70 NPSIVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLL 127
P +R +FSAT P ++ LAR + D + + VGR + SE+I QK+V+ + +
Sbjct: 417 PPKGIRQTMMFSATFPKEIQILARDFLEDYIFLAVGRVGSTSENITQKVVWVEESDKRSF 476
Query: 128 ALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
L A + L+FV++K A L L + IH D SQ
Sbjct: 477 LLDLLSATGKDSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQ 523
>gi|169602158|ref|XP_001794501.1| hypothetical protein SNOG_03958 [Phaeosphaeria nodorum SN15]
gi|160706094|gb|EAT89163.2| hypothetical protein SNOG_03958 [Phaeosphaeria nodorum SN15]
Length = 623
Score = 80.5 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 55/166 (33%), Positives = 88/166 (53%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L+ ++YLVLDEAD++ ++G I +V+ P
Sbjct: 264 CDLLVATPGRLVDLIERGRISLASIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPPTAG 322
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + + + + VGR + SE+I QK+ + + + LL +
Sbjct: 323 RQTLMFSATFPRDIQMLARDFLKEYIFLSVGRVGSTSENITQKIEYVEDADKRSVLLDIL 382
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L+ LIFV++K A L L A IH D +Q +
Sbjct: 383 HTHGAGLS---LIFVETKRMADSLSDFLINQGFPATSIHGDRTQRE 425
>gi|327268480|ref|XP_003219025.1| PREDICTED: ATP-dependent RNA helicase DDX3X-like isoform 3 [Anolis
carolinensis]
Length = 709
Score = 80.5 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 57/167 (34%), Positives = 86/167 (51%), Gaps = 3/167 (1%)
Query: 10 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
DL + C +L++TP RL + R KI L +YLVLDEAD++ ++G + V K
Sbjct: 356 DLER-GCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEKDTM 414
Query: 70 NPSIVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLL 127
P VR +FSAT P ++ LAR + + + + VGR + SE+I QK+V+ + +
Sbjct: 415 PPKGVRQTMMFSATFPKEIQMLARDFLEEYIFLAVGRVGSTSENITQKVVWVEDSDKRSF 474
Query: 128 ALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
L A + L+FV++K A L L + IH D SQ
Sbjct: 475 LLDLLDATGKDSLTLVFVETKKGADSLEDFLFREGYACTSIHGDRSQ 521
>gi|254585603|ref|XP_002498369.1| ZYRO0G08580p [Zygosaccharomyces rouxii]
gi|238941263|emb|CAR29436.1| ZYRO0G08580p [Zygosaccharomyces rouxii]
Length = 539
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 91/168 (54%), Gaps = 7/168 (4%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
+ ++++TP RL I + +DLS+V+YLVLDEAD++ E G + I ++ ++
Sbjct: 247 NSQVVVATPGRLLDLINEQSVDLSQVQYLVLDEADRMLEKG-FEEDIKNIINQTNSRDRQ 305
Query: 75 RSLFSATLPDFVEELARSIMHDAVRVIVGRKN--TASESIKQ--KLVFAGSEEGKLLALR 130
+F+AT P V ELA + M D V+V +G ++ +A++ I Q +++ ++ KLL L
Sbjct: 306 TLMFTATWPKEVRELASTFMRDPVKVSIGNRDELSANKRITQIVEVIEPRQKDRKLLELL 365
Query: 131 QSFAESL--NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + + VLIF K A + L ++ IH DLSQ Q
Sbjct: 366 RKYQSGAKKDDKVLIFALYKKEASRVENNLKYNGYDVAAIHGDLSQQQ 413
>gi|327268478|ref|XP_003219024.1| PREDICTED: ATP-dependent RNA helicase DDX3X-like isoform 2 [Anolis
carolinensis]
Length = 706
Score = 80.5 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 57/167 (34%), Positives = 86/167 (51%), Gaps = 3/167 (1%)
Query: 10 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
DL + C +L++TP RL + R KI L +YLVLDEAD++ ++G + V K
Sbjct: 353 DLER-GCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEKDTM 411
Query: 70 NPSIVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLL 127
P VR +FSAT P ++ LAR + + + + VGR + SE+I QK+V+ + +
Sbjct: 412 PPKGVRQTMMFSATFPKEIQMLARDFLEEYIFLAVGRVGSTSENITQKVVWVEDSDKRSF 471
Query: 128 ALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
L A + L+FV++K A L L + IH D SQ
Sbjct: 472 LLDLLDATGKDSLTLVFVETKKGADSLEDFLFREGYACTSIHGDRSQ 518
>gi|327268476|ref|XP_003219023.1| PREDICTED: ATP-dependent RNA helicase DDX3X-like isoform 1 [Anolis
carolinensis]
Length = 713
Score = 80.5 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 57/167 (34%), Positives = 86/167 (51%), Gaps = 3/167 (1%)
Query: 10 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
DL + C +L++TP RL + R KI L +YLVLDEAD++ ++G + V K
Sbjct: 360 DLER-GCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEKDTM 418
Query: 70 NPSIVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLL 127
P VR +FSAT P ++ LAR + + + + VGR + SE+I QK+V+ + +
Sbjct: 419 PPKGVRQTMMFSATFPKEIQMLARDFLEEYIFLAVGRVGSTSENITQKVVWVEDSDKRSF 478
Query: 128 ALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
L A + L+FV++K A L L + IH D SQ
Sbjct: 479 LLDLLDATGKDSLTLVFVETKKGADSLEDFLFREGYACTSIHGDRSQ 525
>gi|381160579|ref|ZP_09869811.1| DNA/RNA helicase, superfamily II [Thiorhodovibrio sp. 970]
gi|380878643|gb|EIC20735.1| DNA/RNA helicase, superfamily II [Thiorhodovibrio sp. 970]
Length = 438
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 90/164 (54%), Gaps = 5/164 (3%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ DIL++TP RL + + +DL VE LVLDEAD++ ++G + I V+K P+
Sbjct: 124 RRGVDILVATPGRLLDHVGQGNLDLGHVELLVLDEADRMLDMG-FMPAIRRVLKLL--PA 180
Query: 73 IVRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
++ LFSAT +E+LA +++D +R+ V R+NTA+E+++Q L K L
Sbjct: 181 RRQNLLFSATYSRDIEQLATGLLNDPLRIEVARRNTAAETVRQ-LAHPVERGHKRALLSH 239
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
A L+F ++K A L +L D I A IH + SQ+
Sbjct: 240 LIASGGWDQTLVFTRTKHGANRLAQQLERDGISAAAIHGNKSQS 283
>gi|444376980|ref|ZP_21176218.1| ATP-dependent RNA helicase RhlB [Enterovibrio sp. AK16]
gi|443679105|gb|ELT85767.1| ATP-dependent RNA helicase RhlB [Enterovibrio sp. AK16]
Length = 430
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 90/159 (56%), Gaps = 3/159 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI-VR 75
DILI T R+ +++ IDLS ++ +VLDEAD++F++G +K I + + P+ +
Sbjct: 134 DILIGTCGRIIDFYKQRVIDLSGIQAVVLDEADRMFDLG-FIKDIRFLFRRMPAPADRLN 192
Query: 76 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 135
LFSATL V+ELA M + V+V + IK++L F S K+ L+ E
Sbjct: 193 MLFSATLSYRVQELAFEHMTNPEHVVVEPEQKTGHRIKEEL-FYPSNTDKMRLLQTLIEE 251
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
++F +K R ++++G LA DD+RAG++ D+ Q
Sbjct: 252 EWPERAIVFANTKHRCEDIWGHLAADDLRAGLLTGDVPQ 290
>gi|351713448|gb|EHB16367.1| ATP-dependent RNA helicase DDX3Y [Heterocephalus glaber]
Length = 652
Score = 80.5 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 56/163 (34%), Positives = 84/163 (51%), Gaps = 6/163 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSI 73
C +L++TP RL + R KI L +YLVLDEAD++ ++G ++HI V K P
Sbjct: 317 CHLLVATPGRLEDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRHI--VEKYTMPPKG 374
Query: 74 VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
VR +FSAT P ++ LAR + + + + VGR + SE+I Q++V+ E + L
Sbjct: 375 VRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQRVVWVEELEKRSFLLDL 434
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
L+FV++K A L L + IH D SQ
Sbjct: 435 LGPTGKGSLTLVFVETKKGADSLEDFLHHEGYACTSIHGDRSQ 477
>gi|328875962|gb|EGG24326.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 806
Score = 80.5 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 56/168 (33%), Positives = 90/168 (53%), Gaps = 9/168 (5%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-- 70
K C+IL+ TP R+ I+ K ++R +LVLDEAD++F++G +P V++
Sbjct: 452 KAGCEILVGTPGRIIDMIKLKATKMNRCTFLVLDEADRMFDMG-----FEPQVQSIIGQI 506
Query: 71 -PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 129
P LFSAT P+ +E+LAR+I+ D +R+ +G +A++ IKQ + S+ K L
Sbjct: 507 RPDRQTLLFSATFPNAIEQLARNILTDPIRISIGNSGSANQDIKQFVKVLPSDGEKWGWL 566
Query: 130 RQSFAESLNP-PVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
++ L V+IFV +K ++L L A IH D Q +
Sbjct: 567 TETLPLMLTEGNVVIFVSTKVAVEQLSTNLLKFGFLADGIHGDKDQQE 614
>gi|423139268|ref|ZP_17126906.1| ATP-dependent RNA helicase RhlE [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
gi|379051822|gb|EHY69713.1| ATP-dependent RNA helicase RhlE [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
Length = 453
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 87/164 (53%), Gaps = 7/164 (4%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ D+L++TP RL + + L ++E LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQIEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 73 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
R LFSAT D ++ LA ++H+ + + V R+NTASE + Q + F + + L L
Sbjct: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASEQVTQHVHFVDKKRKREL-LS 237
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
Q + VL+F ++K A L +L D IR+ IH + SQ
Sbjct: 238 QMIGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQ 281
>gi|343505788|ref|ZP_08743340.1| putative ATP-dependent RNA helicase [Vibrio ichthyoenteri ATCC
700023]
gi|342806221|gb|EGU41455.1| putative ATP-dependent RNA helicase [Vibrio ichthyoenteri ATCC
700023]
Length = 426
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 88/162 (54%), Gaps = 5/162 (3%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKAC-SNPSI 73
DIL++TP RL + K + L +E+LV DEAD++ ++G + I+ +++ + P
Sbjct: 124 GVDILVATPGRLIEHLELKNVSLVNLEFLVFDEADRMLDMG-FISAIEKIMQGVKTKPQT 182
Query: 74 VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 133
+ LFSAT + +LA I+ R+ V R+NT +E+I +V+ +E K L +
Sbjct: 183 M--LFSATFSAQMNKLAGEILRAPKRIAVARENTTAETIAH-VVYPVEQERKRELLSELI 239
Query: 134 AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
VL+FV K+ A EL EL D I+A + H D +Q+
Sbjct: 240 GRKNWKQVLVFVNYKETANELVKELKLDGIKAVLCHGDKAQS 281
>gi|396484726|ref|XP_003842000.1| hypothetical protein LEMA_P077600.1 [Leptosphaeria maculans JN3]
gi|312218576|emb|CBX98521.1| hypothetical protein LEMA_P077600.1 [Leptosphaeria maculans JN3]
Length = 679
Score = 80.5 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L+ ++YLVLDEAD++ ++G I +V+ P
Sbjct: 329 CDLLVATPGRLVDLIERGRISLANIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPPTAA 387
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + + + + VGR + SE+I QK+ + + + LL +
Sbjct: 388 RQTLMFSATFPRDIQMLARDFLKEYIFLSVGRVGSTSENITQKVEYVEDADKRSVLLDIL 447
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L LIFV++K A L L A IH D +Q +
Sbjct: 448 HTHGAGL---TLIFVETKRMADSLSDFLINQGFPATSIHGDRTQRE 490
>gi|91772311|ref|YP_565003.1| DEAD/DEAH box helicase-like protein [Methanococcoides burtonii DSM
6242]
gi|91711326|gb|ABE51253.1| DEAD-box RNA helicase [Methanococcoides burtonii DSM 6242]
Length = 463
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 88/163 (53%), Gaps = 5/163 (3%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
D L++TP RL I++ I LS VEY VLDEAD++ ++G L ++ +V P
Sbjct: 124 GVDCLVATPGRLLDLIQQGHIKLSNVEYFVLDEADRMLDMG-FLNDVNKIVDML--PKKR 180
Query: 75 RSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 133
+SL FSAT+ + LAR ++ + +V V + T E I+Q + F S+ L L
Sbjct: 181 QSLFFSATMSPEISTLARKMLSNPAQVEVTPQATTVERIEQFIFFVDSDNKNELLLHLLR 240
Query: 134 AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E L+ VL+F ++K RA ++ L +I AG IH SQT
Sbjct: 241 GEHLD-CVLVFTRTKHRANKVTEMLNKSNINAGAIHGSKSQTH 282
>gi|296273966|ref|YP_003656597.1| DEAD/DEAH box helicase [Arcobacter nitrofigilis DSM 7299]
gi|296098140|gb|ADG94090.1| DEAD/DEAH box helicase domain protein [Arcobacter nitrofigilis DSM
7299]
Length = 480
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 91/161 (56%), Gaps = 5/161 (3%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
DI+I+TP RL I +K ID+S VE+ +LDEAD++ ++G ++ I V+ PS
Sbjct: 124 GVDIVIATPGRLLDHIEQKTIDISHVEHFILDEADRMLDMG-FIRDIRKVLALL--PSHR 180
Query: 75 RS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 133
++ LFSAT D +++L+ I++ + V R+NT+SE + Q + + K L L +
Sbjct: 181 QNLLFSATFSDEIKKLSDGILNKPKLIEVARRNTSSEMVSQVIHLVDKDRKKTL-LSKLI 239
Query: 134 AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
E VL+F ++K A +L +L D I A IH + SQ
Sbjct: 240 KEGDWRQVLVFTRTKHGANKLSQQLEIDGITATAIHGNKSQ 280
>gi|365969640|ref|YP_004951201.1| ATP-dependent RNA helicase rhlE [Enterobacter cloacae EcWSU1]
gi|365748553|gb|AEW72780.1| ATP-dependent RNA helicase rhlE [Enterobacter cloacae EcWSU1]
Length = 460
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 85/162 (52%), Gaps = 3/162 (1%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ D+L++TP RL + + L +E LVLDEAD++ ++G + H V A P
Sbjct: 123 RGGVDVLVATPGRLLDLEHQNALKLDSIEILVLDEADRMLDMGFI--HDIRRVLAKLPPR 180
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
LFSAT D ++ LA ++H+ + V V R+NTASE I Q + F + + L L
Sbjct: 181 RQNLLFSATFSDEIKALAEKLLHNPLEVEVARRNTASEQITQHVHFVDKKRKREL-LSHM 239
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ VL+F ++K A L +L D IR+ IH + SQ
Sbjct: 240 IGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQ 281
>gi|343510871|ref|ZP_08748064.1| putative ATP-dependent RNA helicase [Vibrio scophthalmi LMG 19158]
gi|342800061|gb|EGU35605.1| putative ATP-dependent RNA helicase [Vibrio scophthalmi LMG 19158]
Length = 426
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 88/162 (54%), Gaps = 5/162 (3%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKAC-SNPSI 73
DIL++TP RL + K + L +E+LV DEAD++ ++G + I+ +++ + P
Sbjct: 124 GVDILVATPGRLIEHLELKNVSLVNLEFLVFDEADRMLDMG-FISAIEKIMQGVKTKPQT 182
Query: 74 VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 133
+ LFSAT + +LA I+ R+ V R+NT +E+I +V+ +E K L +
Sbjct: 183 M--LFSATFSAQMNKLAGEILRAPKRIAVARENTTAETIAH-VVYPVEQERKRELLSELI 239
Query: 134 AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
VL+FV K+ A EL EL D I+A + H D +Q+
Sbjct: 240 GRKNWKQVLVFVNYKETANELVKELKLDGIKAVLCHGDKAQS 281
>gi|423277384|ref|ZP_17256298.1| hypothetical protein HMPREF1203_00515 [Bacteroides fragilis HMW
610]
gi|404587133|gb|EKA91683.1| hypothetical protein HMPREF1203_00515 [Bacteroides fragilis HMW
610]
Length = 418
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 89/164 (54%), Gaps = 6/164 (3%)
Query: 14 FSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI 73
D++I+TP RL + +DLSRV Y +LDEAD++ ++G + I +VK P
Sbjct: 124 LGADVVIATPGRLIAHLSLGYVDLSRVSYFILDEADRMLDMG-FYEDIMQIVKYL--PKE 180
Query: 74 VRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
++ +FSAT+P +++LA +I+++ V + A + ++ V E KL +R
Sbjct: 181 RQTIMFSATMPSKIQQLANTILNNPAEVKLAVSKPAEKIVQAAYVC--YENQKLGIVRSL 238
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
FAE + V+IF SK + KE+ L + G +HSDL Q Q
Sbjct: 239 FAEEVPERVIIFASSKLKVKEVAKALKMMKLNVGEMHSDLEQAQ 282
>gi|348590558|ref|YP_004875020.1| ATP-dependent RNA helicase [Taylorella asinigenitalis MCE3]
gi|347974462|gb|AEP36997.1| ATP-dependent RNA helicase [Taylorella asinigenitalis MCE3]
Length = 444
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 96/176 (54%), Gaps = 12/176 (6%)
Query: 2 KKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHI 61
K EL+R DI+I+TP RL + ++ I+L++VE+L+LDEAD++ ++G +L +
Sbjct: 124 KHELMRG-------ADIVIATPGRLLDHVEQRTINLNQVEFLILDEADRMLDMGFMLDLL 176
Query: 62 DPVVKACSNPSIVRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAG 120
+ + PS +S L+SAT D + LA+ +HD V + V N+ + +I Q+ +F+
Sbjct: 177 KILAQL---PSRRQSLLYSATFSDNIRSLAQKFLHDPVEITVASNNSTASTITQE-IFSV 232
Query: 121 SEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
SE K AL A V+IF K K L L D+ A +H D +Q++
Sbjct: 233 SEAEKNAALLYLLASRNFNNVIIFSNRKITCKNLERYLNNLDLSAQSLHGDKTQSE 288
>gi|452751177|ref|ZP_21950923.1| ATP-dependent RNA helicase RhlE [alpha proteobacterium JLT2015]
gi|451961327|gb|EMD83737.1| ATP-dependent RNA helicase RhlE [alpha proteobacterium JLT2015]
Length = 591
Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 55/163 (33%), Positives = 92/163 (56%), Gaps = 9/163 (5%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIV 74
DIL++TP RL I ++ + L V+ LVLDEAD++ ++G + L+ I P+V P
Sbjct: 127 DILVATPGRLLDLIDQRALSLHEVQVLVLDEADQMLDLGFIHALRKIVPMV-----PKTR 181
Query: 75 RSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 133
++L FSAT+P + ELA + + +V V ++T +E ++Q+ F ++E + L L +
Sbjct: 182 QTLFFSATMPKQISELAGKYLTNPAKVEVQPESTTAERVEQRCTFVNAKEKQAL-LTLTL 240
Query: 134 AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ VL+F ++K A + L DIR+ IH + SQ Q
Sbjct: 241 ERTEFDRVLVFTRTKHGADRVVRNLEGADIRSAAIHGNKSQAQ 283
>gi|365990195|ref|XP_003671927.1| hypothetical protein NDAI_0I01150 [Naumovozyma dairenensis CBS 421]
gi|343770701|emb|CCD26684.1| hypothetical protein NDAI_0I01150 [Naumovozyma dairenensis CBS 421]
Length = 523
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 91/165 (55%), Gaps = 7/165 (4%)
Query: 18 ILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 77
++++TP RL I+ ++LS V+YLVLDEAD++ E G + I +++ S +
Sbjct: 234 VVVATPGRLLDLIQEGSVNLSAVKYLVLDEADRMLEKG-FEEDIKNIIRETSPKGRQTLM 292
Query: 78 FSATLPDFVEELARSIMHDAVRVIVGRKN--TASESIKQ--KLVFAGSEEGKLLALRQSF 133
F+AT P V ELA S M++ V+V +G ++ TA++ I Q +++ ++ KLL L + +
Sbjct: 293 FTATWPKEVRELASSFMNEPVKVSIGNRDELTANKRITQIVEVIDPQRKDRKLLDLLKKY 352
Query: 134 --AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ N VLIF K A + L ++ IH DLSQ Q
Sbjct: 353 HSGPTKNDKVLIFALYKKEAARVERNLKYNGYEVAAIHGDLSQEQ 397
>gi|451848629|gb|EMD61934.1| hypothetical protein COCSADRAFT_162462 [Cochliobolus sativus
ND90Pr]
Length = 679
Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 55/166 (33%), Positives = 88/166 (53%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L+ ++YLVLDEAD++ ++G I +V+ P
Sbjct: 325 CDLLVATPGRLVDLIERGRISLASIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPPTAG 383
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + + + + VGR + SE+I QK+ + + + LL +
Sbjct: 384 RQTLMFSATFPRDIQMLARDFLKEYIFLSVGRVGSTSENITQKIEYVEDADKRSVLLDIL 443
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L+ LIFV++K A L L A IH D +Q +
Sbjct: 444 HTHGVGLS---LIFVETKRMADSLSDFLINQGFPATSIHGDRTQRE 486
>gi|403170819|ref|XP_003330106.2| hypothetical protein PGTG_11016 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375168903|gb|EFP85687.2| hypothetical protein PGTG_11016 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 640
Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 53/164 (32%), Positives = 84/164 (51%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L +TP RL I R +I LS + +LVLDEAD++ ++G I +V P +
Sbjct: 294 CDLLSATPGRLVDFIERGRISLSNIRFLVLDEADRMLDMG-FEPQIRRIVTGEDMPGVHE 352
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LA+ + D + + VGR + SE+I QK+ + + + + L
Sbjct: 353 RQTLMFSATFPRDIQMLAKDFLKDYIFLSVGRVGSTSENITQKIEYVEDADKRSVLLDVL 412
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L+FV++K A L L + A IH D SQ +
Sbjct: 413 SSMPTGGLTLVFVETKRMADMLENFLIQSNFAATSIHGDRSQRE 456
>gi|53713588|ref|YP_099580.1| ATP-dependent RNA helicase [Bacteroides fragilis YCH46]
gi|60681868|ref|YP_212012.1| ATP-dependent RNA helicase [Bacteroides fragilis NCTC 9343]
gi|265763909|ref|ZP_06092477.1| ATP-dependent RNA helicase [Bacteroides sp. 2_1_16]
gi|336409944|ref|ZP_08590426.1| hypothetical protein HMPREF1018_02442 [Bacteroides sp. 2_1_56FAA]
gi|375358679|ref|YP_005111451.1| putative ATP-dependent RNA helicase [Bacteroides fragilis 638R]
gi|383118552|ref|ZP_09939293.1| hypothetical protein BSHG_2552 [Bacteroides sp. 3_2_5]
gi|423250187|ref|ZP_17231203.1| hypothetical protein HMPREF1066_02213 [Bacteroides fragilis
CL03T00C08]
gi|423255690|ref|ZP_17236619.1| hypothetical protein HMPREF1067_03263 [Bacteroides fragilis
CL03T12C07]
gi|423257252|ref|ZP_17238175.1| hypothetical protein HMPREF1055_00452 [Bacteroides fragilis
CL07T00C01]
gi|423265778|ref|ZP_17244781.1| hypothetical protein HMPREF1056_02468 [Bacteroides fragilis
CL07T12C05]
gi|423271549|ref|ZP_17250519.1| hypothetical protein HMPREF1079_03601 [Bacteroides fragilis
CL05T00C42]
gi|423275547|ref|ZP_17254491.1| hypothetical protein HMPREF1080_03144 [Bacteroides fragilis
CL05T12C13]
gi|423284322|ref|ZP_17263206.1| hypothetical protein HMPREF1204_02744 [Bacteroides fragilis HMW
615]
gi|52216453|dbj|BAD49046.1| ATP-dependent RNA helicase [Bacteroides fragilis YCH46]
gi|60493302|emb|CAH08086.1| putative ATP-dependent RNA helicase [Bacteroides fragilis NCTC
9343]
gi|251945856|gb|EES86263.1| hypothetical protein BSHG_2552 [Bacteroides sp. 3_2_5]
gi|263256517|gb|EEZ27863.1| ATP-dependent RNA helicase [Bacteroides sp. 2_1_16]
gi|301163360|emb|CBW22910.1| putative ATP-dependent RNA helicase [Bacteroides fragilis 638R]
gi|335946325|gb|EGN08131.1| hypothetical protein HMPREF1018_02442 [Bacteroides sp. 2_1_56FAA]
gi|387778728|gb|EIK40823.1| hypothetical protein HMPREF1055_00452 [Bacteroides fragilis
CL07T00C01]
gi|392650483|gb|EIY44151.1| hypothetical protein HMPREF1067_03263 [Bacteroides fragilis
CL03T12C07]
gi|392653762|gb|EIY47414.1| hypothetical protein HMPREF1066_02213 [Bacteroides fragilis
CL03T00C08]
gi|392697245|gb|EIY90431.1| hypothetical protein HMPREF1079_03601 [Bacteroides fragilis
CL05T00C42]
gi|392701723|gb|EIY94879.1| hypothetical protein HMPREF1080_03144 [Bacteroides fragilis
CL05T12C13]
gi|392703436|gb|EIY96580.1| hypothetical protein HMPREF1056_02468 [Bacteroides fragilis
CL07T12C05]
gi|404579990|gb|EKA84702.1| hypothetical protein HMPREF1204_02744 [Bacteroides fragilis HMW
615]
Length = 418
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 89/164 (54%), Gaps = 6/164 (3%)
Query: 14 FSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI 73
D++I+TP RL + +DLSRV Y +LDEAD++ ++G + I +VK P
Sbjct: 124 LGADVVIATPGRLIAHLSLGYVDLSRVSYFILDEADRMLDMG-FYEDIMQIVKYL--PKE 180
Query: 74 VRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
++ +FSAT+P +++LA +I+++ V + A + ++ + E KL +R
Sbjct: 181 RQTIMFSATMPAKIQQLANTILNNPAEVKLAVSKPAEKIVQA--AYVCYENQKLGIVRSL 238
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
FAE + V+IF SK + KE+ L + G +HSDL Q Q
Sbjct: 239 FAEEVPERVIIFASSKIKVKEVAKALKMMKLNVGEMHSDLEQVQ 282
>gi|357117717|ref|XP_003560609.1| PREDICTED: putative cellulose synthase A catalytic subunit 11
[UDP-forming]-like [Brachypodium distachyon]
Length = 1265
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 58/178 (32%), Positives = 89/178 (50%), Gaps = 13/178 (7%)
Query: 10 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
DL K D+L++TP RL + R K+ L ++YLV+DEAD++ ++G I +V
Sbjct: 885 DLEK-GVDVLVATPGRLVDMVERAKVSLEAIKYLVMDEADRMLDMG-FEPQIRKIVDGMG 942
Query: 70 NP-SIVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 126
P VR LFSAT P ++ LA + + + VGR ++++ I QK+ F E ++
Sbjct: 943 MPRKSVRQTMLFSATFPPQIQRLASDFLSKYIFITVGRVGSSTDLITQKVEFLSDGEKRI 1002
Query: 127 LAL----RQSFAES----LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L +QS S P L+FV++K A L L A IH D +Q +
Sbjct: 1003 YLLDLLQKQSVGSSDGKLQQPLTLVFVETKREADSLRYWLYNKGFPATAIHGDRTQEE 1060
>gi|119899811|ref|YP_935024.1| putative ATP-dependent RNA helicase [Azoarcus sp. BH72]
gi|119672224|emb|CAL96138.1| putative ATP-dependent RNA helicase [Azoarcus sp. BH72]
Length = 537
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 58/159 (36%), Positives = 88/159 (55%), Gaps = 3/159 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DIL++TP RL + +K +DLS VE LVLDEAD++ ++G ++ I V+ A
Sbjct: 131 DILVATPGRLLDHVGQKTLDLSGVEILVLDEADRMLDMG-FIRDIRKVL-ALLPKQRQNL 188
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
LFSAT D + +LA ++H+ V V +NTASE ++Q + G ++ + L L E
Sbjct: 189 LFSATFSDEIRDLANGLLHNPGCVEVAPRNTASERVEQTVYMIGQKQKREL-LAWLIKEK 247
Query: 137 LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
L+F ++K A +L L DI A IH + SQ+
Sbjct: 248 QWFQALVFTRTKHGANKLAEYLTKHDIPAAAIHGNKSQS 286
>gi|421590985|ref|ZP_16035909.1| ATP-dependent RNA helicase, partial [Rhizobium sp. Pop5]
gi|403703636|gb|EJZ19816.1| ATP-dependent RNA helicase, partial [Rhizobium sp. Pop5]
Length = 339
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 88/164 (53%), Gaps = 6/164 (3%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKACSNPS 72
DIL++TP RL + R+ I L+ V YLVLDEAD++ ++G + L+ I +V
Sbjct: 125 GTDILVATPGRLLDLVNRRAITLTTVRYLVLDEADQMLDLGFVHDLRKIAKLVPKKRQ-- 182
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
LFSAT+P + +LA + D V+V V A++ ++Q + F G + K LR+S
Sbjct: 183 --TMLFSATMPKAIADLAGEYLVDPVKVEVTPPGKAADKVEQYVHFVGGKNDKTELLRKS 240
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E+ + ++F+++K A++L L IH + SQ Q
Sbjct: 241 LTENPDGRAIVFLRTKHGAEKLMKHLDNIGYSVASIHGNKSQGQ 284
>gi|372278653|ref|ZP_09514689.1| DEAD/DEAH box helicase [Oceanicola sp. S124]
Length = 440
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 88/164 (53%), Gaps = 7/164 (4%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL + R+ +DLS+ LVLDEAD++ ++G + L+ I P +
Sbjct: 136 GTDILVATPGRLIDLMDRRAVDLSQTRQLVLDEADQMLDLGFIHALRKIAPKLGTPRR-- 193
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
LFSAT+P +EEL+ + ++ RV V A++ I Q + F E K LR+
Sbjct: 194 --TMLFSATMPKQMEELSSAYLNHPKRVQVSPPGKAADKITQSIHFLPKTE-KPKKLREI 250
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
++ L+ L+F ++K A++L L D A IH + SQ Q
Sbjct: 251 LSQDLDALTLVFSRTKHGAEKLMKGLVADGYNAASIHGNKSQGQ 294
>gi|50289021|ref|XP_446940.1| hypothetical protein [Candida glabrata CBS 138]
gi|74661294|sp|Q6FS54.1|DBP3_CANGA RecName: Full=ATP-dependent RNA helicase DBP3
gi|49526249|emb|CAG59873.1| unnamed protein product [Candida glabrata]
Length = 540
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 90/167 (53%), Gaps = 7/167 (4%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
+++++TP RL I +DLS V+Y+VLDEAD++ E G + I ++ +
Sbjct: 249 SNVVVATPGRLLDLIEEGSVDLSPVDYMVLDEADRMLEKG-FEEDIKRIIGQTKSKDRQT 307
Query: 76 SLFSATLPDFVEELARSIMHDAVRVIVGRKN--TASESIKQ--KLVFAGSEEGKLLALRQ 131
+F+AT P V ELA + M + V+V +G ++ +A++ I Q ++V S+E KLL L +
Sbjct: 308 LMFTATWPKEVRELASTFMKEPVKVSIGNRDELSANKRITQIVEVVDPRSKERKLLDLLK 367
Query: 132 SF--AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ N VLIF K A + L ++ + IH DLSQ Q
Sbjct: 368 KYQSGPKKNDKVLIFALYKKEASRVERNLNYNGYKVAAIHGDLSQQQ 414
>gi|385305995|gb|EIF49935.1| atp-dependent rna helicase ded1 [Dekkera bruxellensis AWRI1499]
Length = 634
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 50/167 (29%), Positives = 89/167 (53%), Gaps = 7/167 (4%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD++++TP RL + R + LS +++LVLDEAD++ ++G I +V+ C P
Sbjct: 286 CDLIVATPGRLNDMLERGCVSLSHIKFLVLDEADRMLDMG-FEPQIRNIVEGCDMPGTTE 344
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK---LLAL 129
+FSAT P ++ +AR +++ + + VG+ + SE+I Q++++ E+ K L L
Sbjct: 345 RQTLMFSATFPREIQAMARDFLNNYIFLSVGKVGSTSENITQRIMYVEDEDKKSSLLDIL 404
Query: 130 RQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ LIFV++K A L L + A IH D + ++
Sbjct: 405 SSTDDTLTTGLTLIFVETKRMADILSDFLIXQNFPATSIHGDRTXSE 451
>gi|425073153|ref|ZP_18476259.1| hypothetical protein HMPREF1310_02594 [Proteus mirabilis WGLW4]
gi|404595790|gb|EKA96324.1| hypothetical protein HMPREF1310_02594 [Proteus mirabilis WGLW4]
Length = 465
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 90/165 (54%), Gaps = 9/165 (5%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG---NLLKHIDPVVKACS 69
+ D+LI+TP RL + +DLSRVE LVLDEAD++ ++G ++ + I+ + K
Sbjct: 124 RGGVDVLIATPGRLLDLEHQNAVDLSRVEVLVLDEADRMLDMGFIHDIRRVINKLPKKRQ 183
Query: 70 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 129
N LFSAT + LA S++++ + + V KN+A+ES++Q V ++ K L
Sbjct: 184 N-----LLFSATFSKEITGLANSLLNNPISIAVAPKNSAAESVEQ-YVHLVDKKRKTELL 237
Query: 130 RQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
P VLIF ++K A +L L D I++ IH + SQ
Sbjct: 238 SHLIGLENWPQVLIFTRTKHGANKLAEHLNLDGIKSAAIHGNKSQ 282
>gi|317503390|ref|ZP_07961434.1| DEAD/DEAH box family ATP-dependent RNA helicase [Prevotella salivae
DSM 15606]
gi|315665485|gb|EFV05108.1| DEAD/DEAH box family ATP-dependent RNA helicase [Prevotella salivae
DSM 15606]
Length = 542
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 54/165 (32%), Positives = 91/165 (55%), Gaps = 10/165 (6%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG---NLLKHIDPVVKACS 69
+ D++I+TP RL I +DLS+V + +LDEAD++ ++G ++LK + ++C
Sbjct: 124 QLGADVVIATPGRLISHISLGNVDLSKVSFFILDEADRMLDMGFSDDILKIAKKLPQSCQ 183
Query: 70 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 129
+FSAT+PD +EELA++++ + +VI + +E IKQ + E K+ +
Sbjct: 184 T-----IMFSATMPDKIEELAKTLLKNP-KVIKLAVSKPAEKIKQS-AYVCYETQKMGII 236
Query: 130 RQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ F V+IF SK + K++ G L I G +HSDL Q
Sbjct: 237 KDIFKSDDLKRVIIFCGSKMKVKQVAGALQRKHINCGEMHSDLDQ 281
>gi|302845088|ref|XP_002954083.1| hypothetical protein VOLCADRAFT_82651 [Volvox carteri f.
nagariensis]
gi|300260582|gb|EFJ44800.1| hypothetical protein VOLCADRAFT_82651 [Volvox carteri f.
nagariensis]
Length = 612
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 55/170 (32%), Positives = 91/170 (53%), Gaps = 7/170 (4%)
Query: 10 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
DL + CDIL++TP RL I R ++ LS + +L LDEAD++ ++G I +V+
Sbjct: 280 DLER-GCDILVATPGRLSDFIERGRVGLSSILFLCLDEADRMLDMG-FEPQIRRIVEQED 337
Query: 70 NPSIVRS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 126
P + + +FSAT P ++ LA + + V + VGR ++++ I Q + + S+E +
Sbjct: 338 MPPVGQRQTLMFSATFPKEIQRLAADFLSNYVFLTVGRVGSSTDLIVQHIEYVSSDEKQN 397
Query: 127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L ++ L+FV++K A EL L + + A IH D SQ Q
Sbjct: 398 TLL--DLISTVEGLTLVFVETKRGADELERILTRNQLPATSIHGDRSQEQ 445
>gi|432931307|ref|XP_004081650.1| PREDICTED: putative ATP-dependent RNA helicase an3-like [Oryzias
latipes]
Length = 686
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 54/161 (33%), Positives = 82/161 (50%), Gaps = 2/161 (1%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
C +L++TP RL + R KI L YLVLDEAD++ ++G + V + P +R
Sbjct: 347 CHLLVATPGRLVDMMERGKIGLDYCNYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGIR 406
Query: 76 S--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 133
+FSAT P ++ LAR + D + + VGR + SE+I QK+V+ + + L
Sbjct: 407 QTMMFSATFPKEIQILARDFLEDYIFLAVGRVGSTSENITQKVVWVEDNDKRSFLLDLLN 466
Query: 134 AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
A + L+FV++K A L L + IH D SQ
Sbjct: 467 ATGKDSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQ 507
>gi|402839348|ref|ZP_10887838.1| DEAD/DEAH box helicase [Eubacteriaceae bacterium OBRC8]
gi|402270250|gb|EJU19517.1| DEAD/DEAH box helicase [Eubacteriaceae bacterium OBRC8]
Length = 383
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 91/161 (56%), Gaps = 5/161 (3%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
+ ++++TP RL IR I++ + L++DEAD++ E G L + K N IV
Sbjct: 120 NSQLIVATPGRLLEHIRAGNINMKYIRQLIIDEADQMLEYGFLEDIVLLKDKLPDNLQIV 179
Query: 75 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
L SAT+P + +LA+ ++ + V++ + ++NT +++I+Q L+F SE+ KL L+
Sbjct: 180 --LLSATMPKPIIDLAKKLIKNPVKIDIVQENTVTDNIEQ-LIFKTSEKNKLSTLK-FVI 235
Query: 135 ESLNP-PVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
E NP +IF SK A++LY + D ++H D SQ
Sbjct: 236 EQYNPFMAIIFCNSKKNAEKLYELMGVDGYDCDILHGDFSQ 276
>gi|348524092|ref|XP_003449557.1| PREDICTED: putative ATP-dependent RNA helicase an3-like isoform 2
[Oreochromis niloticus]
Length = 687
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 57/168 (33%), Positives = 88/168 (52%), Gaps = 5/168 (2%)
Query: 10 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
DL + C +L++TP RL + R KI L YLV+DEAD++ ++G I +V+ +
Sbjct: 340 DLER-GCHLLVATPGRLVDMMERGKIGLDYCHYLVVDEADRMLDMG-FEPQIRRIVEQDT 397
Query: 70 NP--SIVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 126
P I R++ FSAT P ++ LAR + D + + VGR + SE+I QK+V+ + +
Sbjct: 398 MPPKGIRRTMMFSATFPKEIQILARDFLEDYIFLAVGRVGSTSENITQKVVWVEETDKRS 457
Query: 127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
L A + L+FV++K A L L + IH D SQ
Sbjct: 458 FLLDLLNATGKDSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQ 505
>gi|348524090|ref|XP_003449556.1| PREDICTED: putative ATP-dependent RNA helicase an3-like isoform 1
[Oreochromis niloticus]
Length = 700
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 57/168 (33%), Positives = 88/168 (52%), Gaps = 5/168 (2%)
Query: 10 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
DL + C +L++TP RL + R KI L YLV+DEAD++ ++G I +V+ +
Sbjct: 355 DLER-GCHLLVATPGRLVDMMERGKIGLDYCHYLVVDEADRMLDMG-FEPQIRRIVEQDT 412
Query: 70 NP--SIVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 126
P I R++ FSAT P ++ LAR + D + + VGR + SE+I QK+V+ + +
Sbjct: 413 MPPKGIRRTMMFSATFPKEIQILARDFLEDYIFLAVGRVGSTSENITQKVVWVEETDKRS 472
Query: 127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
L A + L+FV++K A L L + IH D SQ
Sbjct: 473 FLLDLLNATGKDSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQ 520
>gi|195127173|ref|XP_002008043.1| GI12051 [Drosophila mojavensis]
gi|193919652|gb|EDW18519.1| GI12051 [Drosophila mojavensis]
Length = 797
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 53/163 (32%), Positives = 85/163 (52%), Gaps = 9/163 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PS 72
C+I+++TP R+ ++ K +L RV +LVLDEAD++F +G +P V++ N P
Sbjct: 399 CEIVVATPGRMIDMVKMKATNLRRVTFLVLDEADRMFHMG-----FEPQVRSICNHVRPD 453
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
LFSAT +E LAR I+ D VR++ G N A++ I Q + + K L
Sbjct: 454 RQTLLFSATFKKRIERLARDILTDPVRIVQGDLNEANQDITQHVYVFPNPLQKWNWLLCH 513
Query: 133 FAESLNP-PVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ L+ VL+FV K A+ + L + ++H D+ Q
Sbjct: 514 LVKFLSEGAVLVFVTKKADAETVANNLLVKEYNCLLLHGDMDQ 556
>gi|59711751|ref|YP_204527.1| DNA and RNA helicase [Vibrio fischeri ES114]
gi|59479852|gb|AAW85639.1| DNA and RNA helicase [Vibrio fischeri ES114]
Length = 431
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 92/163 (56%), Gaps = 7/163 (4%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL+ I + + ++ +E+LV DEAD++ ++G N +++I +++ ++P
Sbjct: 124 GVDILVATPGRLQEHIEEENVSIANLEFLVFDEADRMLDMGFVNAIRNI--MMEVNTSPQ 181
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
I+ LFSAT + +LA I+ R+ V +NT + +I +V+ EE K L +
Sbjct: 182 IM--LFSATSSAQMNKLASDILRKPKRISVDPENTTASTIAH-VVYPVDEERKTELLSEL 238
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
VL+FV K+ A E+ EL D I+A + H D +Q+
Sbjct: 239 IGRKNWQQVLVFVNYKETANEIVKELKLDGIKAVLCHGDKAQS 281
>gi|10039333|dbj|BAB13309.1| PL10-related protein PoPL10 [Ephydatia fluviatilis]
Length = 491
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 84/169 (49%), Gaps = 12/169 (7%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
C +L++TP RL + R KI L V YLVLDEAD++ ++G +P ++ ++
Sbjct: 165 GCHLLVATPGRLVDMMERGKIGLDGVRYLVLDEADRMLDMG-----FEPQIRRIVEQDVM 219
Query: 75 RS-------LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLL 127
+FSAT P ++ LAR +HD + + VGR + S++I QK+V+ + +
Sbjct: 220 PKTGDRQTLMFSATFPKEIQMLARDFLHDYIFLAVGRVGSTSQNITQKVVWVDECDKRSF 279
Query: 128 ALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L A + + L+FV++K L L IH D +Q +
Sbjct: 280 LLDLLNASAPDTLTLVFVETKKNCDALDNFLYTQGYSCTCIHGDRTQGE 328
>gi|323305025|gb|EGA58779.1| Dbp3p [Saccharomyces cerevisiae FostersB]
gi|323337602|gb|EGA78847.1| Dbp3p [Saccharomyces cerevisiae Vin13]
Length = 349
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 88/165 (53%), Gaps = 7/165 (4%)
Query: 18 ILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 77
++++TP RL ++ +DLS+V YLVLDEAD++ E G + I +++ +
Sbjct: 60 VVVATPGRLLDLLQEGSVDLSQVNYLVLDEADRMLEKG-FEEDIKNIIRETDASKRQTLM 118
Query: 78 FSATLPDFVEELARSIMHDAVRVIVGRKN--TASESIKQ--KLVFAGSEEGKLLALRQSF 133
F+AT P V ELA + M++ ++V +G + TA++ I Q ++V +E KLL L + +
Sbjct: 119 FTATWPKEVRELASTFMNNPIKVSIGNTDQLTANKRITQIVEVVDPRGKERKLLELLKKY 178
Query: 134 --AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
N VLIF K A + L ++ IH DLSQ Q
Sbjct: 179 HSGPKKNEKVLIFALYKKEAARVERNLKYNGYNVAAIHGDLSQQQ 223
>gi|323348660|gb|EGA82903.1| Dbp3p [Saccharomyces cerevisiae Lalvin QA23]
Length = 290
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 88/165 (53%), Gaps = 7/165 (4%)
Query: 18 ILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 77
++++TP RL ++ +DLS+V YLVLDEAD++ E G + I +++ +
Sbjct: 60 VVVATPGRLLDLLQEGSVDLSQVNYLVLDEADRMLEKG-FEEDIKNIIRETDASKRQTLM 118
Query: 78 FSATLPDFVEELARSIMHDAVRVIVGRKN--TASESIKQ--KLVFAGSEEGKLLALRQSF 133
F+AT P V ELA + M++ ++V +G + TA++ I Q ++V +E KLL L + +
Sbjct: 119 FTATWPKEVRELASTFMNNPIKVSIGNTDQLTANKRITQIVEVVDPRGKERKLLELLKKY 178
Query: 134 --AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
N VLIF K A + L ++ IH DLSQ Q
Sbjct: 179 HSGPKKNEKVLIFALYKKEAARVERNLKYNGYNVAAIHGDLSQQQ 223
>gi|159478699|ref|XP_001697438.1| predicted protein [Chlamydomonas reinhardtii]
gi|158274317|gb|EDP00100.1| predicted protein [Chlamydomonas reinhardtii]
Length = 515
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 91/173 (52%), Gaps = 16/173 (9%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---P 71
+++++TP R +++ +L R+ Y+VLDEAD++ ++G +P +K N P
Sbjct: 238 GVEVVVATPGRFIDHLQQGNTNLGRISYVVLDEADRMLDMG-----FEPQIKEVMNNLPP 292
Query: 72 SIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEG-----KL 126
LFSAT+P +EELAR+ ++ V V +G +T + ++ Q+L A + L
Sbjct: 293 KHQTLLFSATMPKEIEELARAYLNKPVTVKIGAVSTPTANVSQRLEHAPEPQKLDILVAL 352
Query: 127 LALRQSFAESLNPPV---LIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
++ + + PP+ ++FV+ K R E+ L D I A +H L+Q +
Sbjct: 353 ISAEVAAEAAGGPPMPLTIVFVERKTRCDEVAAALREDGINANALHGGLNQNE 405
>gi|334122768|ref|ZP_08496804.1| ATP-dependent RNA helicase RhlE [Enterobacter hormaechei ATCC
49162]
gi|333391883|gb|EGK62992.1| ATP-dependent RNA helicase RhlE [Enterobacter hormaechei ATCC
49162]
Length = 460
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 89/163 (54%), Gaps = 5/163 (3%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ D+L++TP RL + + L +E LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDVLVATPGRLLDLEHQNAVKLDSIEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 73 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
++L FSAT D ++ LA ++H+ + V V R+NTASE + Q + F + + L L Q
Sbjct: 180 RRQNLLFSATFSDEIKALAEKLLHNPLEVEVARRNTASEQVTQHVHFVDKKRKREL-LSQ 238
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ VL+F ++K A L +L D IR+ IH + SQ
Sbjct: 239 MIGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQ 281
>gi|260777564|ref|ZP_05886457.1| ATP-dependent RNA helicase [Vibrio coralliilyticus ATCC BAA-450]
gi|260605577|gb|EEX31862.1| ATP-dependent RNA helicase [Vibrio coralliilyticus ATCC BAA-450]
Length = 420
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 85/160 (53%), Gaps = 3/160 (1%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
CD+LI+TP RL + K I+L + YLVLDEAD++ ++G + I ++K NP
Sbjct: 127 GCDVLIATPGRLLDHLYCKNINLRKTSYLVLDEADRMLDMG-FMPDIQRILKKL-NPERQ 184
Query: 75 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
FSAT ++ +A +M++ V V V N+ +E +KQ +V+ ++ K L
Sbjct: 185 TLFFSATFDKRIKTIAHKLMNEPVEVQVTPSNSTAEKVKQ-MVYPVDKKRKAELLAYLIG 243
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
VL+F ++K + L EL D I+A I+ D SQ
Sbjct: 244 SRNWQQVLVFTKTKQGSDALAKELKLDGIKAASINGDKSQ 283
>gi|394988591|ref|ZP_10381426.1| hypothetical protein SCD_00993 [Sulfuricella denitrificans skB26]
gi|393791970|dbj|GAB71065.1| hypothetical protein SCD_00993 [Sulfuricella denitrificans skB26]
Length = 476
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKACSN 70
K +IL++TP RL + +K ++LS+VE LVLDEAD++ ++G L +K I ++ A
Sbjct: 125 KGGVEILVATPGRLLDHVEQKTVNLSKVEILVLDEADRMLDMGFLPDIKRIIALLPAKRQ 184
Query: 71 PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
LFSAT +++L+ ++ D V + V R+N ASE++ Q + E + L
Sbjct: 185 ----NLLFSATFAGEIKKLSDQLLTDPVLIEVARRNAASENVTQVIYPVDHERKRELLAH 240
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+E+L VL+F ++K A L +L D I A IH D SQ Q
Sbjct: 241 LIKSENLQ-QVLVFSRTKHGASRLAQQLEKDGISATAIHGDKSQQQ 285
>gi|423685883|ref|ZP_17660691.1| DNA and RNA helicase [Vibrio fischeri SR5]
gi|371495184|gb|EHN70781.1| DNA and RNA helicase [Vibrio fischeri SR5]
Length = 431
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 92/163 (56%), Gaps = 7/163 (4%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL+ I + + ++ +E+LV DEAD++ ++G N +++I +++ ++P
Sbjct: 124 GVDILVATPGRLQEHIEEENVSIANLEFLVFDEADRMLDMGFVNAIRNI--MMEVNTSPQ 181
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
I+ LFSAT + +LA I+ R+ V +NT + +I +V+ EE K L +
Sbjct: 182 IM--LFSATSSAQMNKLASDILRKPKRISVDPENTTASTIAH-VVYPVDEERKTELLSEL 238
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
VL+FV K+ A E+ EL D I+A + H D +Q+
Sbjct: 239 IGRKNWQQVLVFVNYKETANEIVKELKLDGIKAVLCHGDKAQS 281
>gi|116253340|ref|YP_769178.1| DEAD/DEAH box helicase [Rhizobium leguminosarum bv. viciae 3841]
gi|115257988|emb|CAK09086.1| putative DEAD box ATP-dependent RNA helicase protein [Rhizobium
leguminosarum bv. viciae 3841]
Length = 576
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 91/165 (55%), Gaps = 8/165 (4%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL I R+ I L+ V YLVLDEAD++ ++G + L+ I +V P
Sbjct: 140 GTDILVATPGRLLDLINRRAITLTAVRYLVLDEADQMLDLGFVHDLRKIAKMV-----PK 194
Query: 73 IVRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
++ LFSAT+P + +LA + D V+V V A++ ++Q + F G + K LR+
Sbjct: 195 KRQTMLFSATMPKAIADLAGEYLVDPVKVEVTPPGKAADKVEQYVHFVGGKNDKTELLRK 254
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
S E+ + ++F+++K A++L L IH + SQ Q
Sbjct: 255 SLTENPDGRAMVFLRTKHGAEKLMKHLENIGYSVASIHGNKSQGQ 299
>gi|384245963|gb|EIE19455.1| DEAD-domain-containing protein, partial [Coccomyxa subellipsoidea
C-169]
Length = 561
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 56/167 (33%), Positives = 91/167 (54%), Gaps = 12/167 (7%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKAC---S 69
K ++ + TP R+ I+ K +RV YLV DEAD++F++G +P V++
Sbjct: 281 KAGAEVAVCTPGRMIDLIKMKACMCTRVTYLVFDEADRMFDMG-----FEPQVRSIIGQV 335
Query: 70 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQ--KLVFAGSEEGKLL 127
P LFSATLP+ ++ L + + VRV VG A++ I Q +++ ++ L
Sbjct: 336 RPDRQTLLFSATLPNKIDRLVQDALTSPVRVTVGEIGAANDDISQVAEVLDDSAKWTWLQ 395
Query: 128 ALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
A QSF + + VL+FV +K RA+E+ G+L ++A IH D+ Q
Sbjct: 396 ANVQSFIDQGD--VLVFVSTKVRAEEISGQLQAAGLKAAAIHGDMDQ 440
>gi|340622132|ref|YP_004740584.1| ATP-dependent RNA helicase deaD-like protein [Capnocytophaga
canimorsus Cc5]
gi|339902398|gb|AEK23477.1| ATP-dependent RNA helicase deaD-like protein [Capnocytophaga
canimorsus Cc5]
Length = 579
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 91/166 (54%), Gaps = 7/166 (4%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
K I+++TP R++ IRR+ +D+S +++ VLDEAD++ +G + I ++
Sbjct: 120 KKGAQIIVATPGRMQDMIRRELVDISAIDFCVLDEADEMLNMG-FYEDITEILSHTPQDK 178
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
LFSAT+P V ++AR M+ + + VG +N AS +I+ + + AL++
Sbjct: 179 YTW-LFSATMPQEVAKIARRFMNKPIEITVGSRNQASNNIRHEYYMVNGRH-RYQALKR- 235
Query: 133 FAESLNPPV--LIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
A++ NP + ++F ++K + + +L D A +H DLSQ Q
Sbjct: 236 LADA-NPDIFSVVFCRTKKDTQAIAEKLIEDGYNAAALHGDLSQNQ 280
>gi|410905961|ref|XP_003966460.1| PREDICTED: putative ATP-dependent RNA helicase Pl10-like isoform 2
[Takifugu rubripes]
Length = 699
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 57/168 (33%), Positives = 87/168 (51%), Gaps = 5/168 (2%)
Query: 10 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
DL + C +L++TP RL + R KI L YLVLDEAD++ ++G I +V+ +
Sbjct: 355 DLER-GCHLLVATPGRLVDMMERGKIGLDYCNYLVLDEADRMLDMG-FEPQIRRIVEQDT 412
Query: 70 NPSI-VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 126
P +R +FSAT P ++ LAR + D + + VGR + SE+I QK+V+ + +
Sbjct: 413 MPHKGIRHTMMFSATFPKEIQILARDFLEDYIFLAVGRVGSTSENITQKVVWVEESDKRS 472
Query: 127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
L A + L+FV++K A L L + IH D SQ
Sbjct: 473 FLLDLLSATGKDSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQ 520
>gi|410905959|ref|XP_003966459.1| PREDICTED: putative ATP-dependent RNA helicase Pl10-like isoform 1
[Takifugu rubripes]
Length = 680
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 57/168 (33%), Positives = 87/168 (51%), Gaps = 5/168 (2%)
Query: 10 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
DL + C +L++TP RL + R KI L YLVLDEAD++ ++G I +V+ +
Sbjct: 334 DLER-GCHLLVATPGRLVDMMERGKIGLDYCNYLVLDEADRMLDMG-FEPQIRRIVEQDT 391
Query: 70 NPSI-VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 126
P +R +FSAT P ++ LAR + D + + VGR + SE+I QK+V+ + +
Sbjct: 392 MPHKGIRHTMMFSATFPKEIQILARDFLEDYIFLAVGRVGSTSENITQKVVWVEESDKRS 451
Query: 127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
L A + L+FV++K A L L + IH D SQ
Sbjct: 452 FLLDLLSATGKDSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQ 499
>gi|197334932|ref|YP_002155940.1| ATP-dependent RNA helicase RhlE [Vibrio fischeri MJ11]
gi|197316422|gb|ACH65869.1| putative ATP-dependent RNA helicase RhlE [Vibrio fischeri MJ11]
Length = 431
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 92/163 (56%), Gaps = 7/163 (4%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL+ I + + ++ +E+LV DEAD++ ++G N +++I +++ ++P
Sbjct: 124 GVDILVATPGRLQEHIEEENVSIANLEFLVFDEADRMLDMGFVNAIRNI--MMEVNTSPQ 181
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
I+ LFSAT + +LA I+ R+ V +NT + +I +V+ EE K L +
Sbjct: 182 IM--LFSATSSAQMNKLASDILRKPKRISVDPENTTASTIAH-VVYPVDEERKTELLSEL 238
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
VL+FV K+ A E+ EL D I+A + H D +Q+
Sbjct: 239 IGRKNWQQVLVFVNYKETANEIVKELKLDGIKAVLCHGDKAQS 281
>gi|167763057|ref|ZP_02435184.1| hypothetical protein BACSTE_01423 [Bacteroides stercoris ATCC
43183]
gi|167699397|gb|EDS15976.1| DEAD/DEAH box helicase [Bacteroides stercoris ATCC 43183]
Length = 430
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 88/164 (53%), Gaps = 6/164 (3%)
Query: 14 FSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI 73
D++I+TP RL + +DLSRV Y +LDEAD++ ++G I +VK P
Sbjct: 124 LGADVVIATPGRLIAHLSLGYVDLSRVSYFILDEADRMLDMG-FYDDIMQIVKFL--PKE 180
Query: 74 VRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
++ +FSAT+P +++LA++I+H+ V + A + + + + E KL +R
Sbjct: 181 RQTIMFSATMPAKIQQLAQNILHNPAEVKLAVSKPAEKIV--QAAYICYENQKLGIIRSL 238
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
FAE V+IF SK + KE+ L + G +HSDL Q Q
Sbjct: 239 FAEQTPERVIIFASSKLKVKEVAKALKQMKLNVGEMHSDLEQAQ 282
>gi|390354880|ref|XP_003728430.1| PREDICTED: ATP-dependent RNA helicase DDX42-like
[Strongylocentrotus purpuratus]
Length = 892
Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 57/167 (34%), Positives = 90/167 (53%), Gaps = 14/167 (8%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSI 73
+++++TP RL +++K +L RV YL+ DEAD++F++G +P V++ ++ P
Sbjct: 278 EVIVATPGRLIDLVKKKATNLRRVSYLIFDEADRMFDMG-----FEPQVRSIADHVRPDR 332
Query: 74 VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK---LLALR 130
LFSAT VE LAR I+ D +RVI G A++ + Q + + K LLA
Sbjct: 333 QTLLFSATFRKKVERLARDILTDPIRVIQGDIGEANQDVTQVVEIFSDQTRKFPWLLARL 392
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDD-IRAGVIHSDLSQTQ 176
F + VLIFV K A+EL L D G++H D++Q +
Sbjct: 393 VRF--TTEGSVLIFVTKKINAEELATSLKRKDHPYVGLLHGDMNQLE 437
>gi|393760514|ref|ZP_10349324.1| ATP-dependent RNA helicase [Alcaligenes faecalis subsp. faecalis
NCIB 8687]
gi|393161371|gb|EJC61435.1| ATP-dependent RNA helicase [Alcaligenes faecalis subsp. faecalis
NCIB 8687]
Length = 487
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 89/160 (55%), Gaps = 7/160 (4%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DIL++TP RL +R++ +DL+ VE LVLDEAD++ ++G I + K S + R
Sbjct: 131 DILVATPGRLLDHVRQRTVDLTGVEILVLDEADRMLDMG----FIRDIRKIISLMPVERQ 186
Query: 77 --LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
LFSAT D + ELAR +++ V V +NT +E I Q+++ A + L L
Sbjct: 187 TLLFSATFSDEIRELARGSLNNPDEVAVAARNTTNELITQQVILAEQAHKRDL-LSHIIR 245
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
ES VL+F ++K A L +L+ D + A +H + SQ
Sbjct: 246 ESSWNQVLVFCRTKHGANRLAEKLSKDGMAAEALHGNKSQ 285
>gi|86358753|ref|YP_470645.1| ATP-dependent RNA helicase [Rhizobium etli CFN 42]
gi|86282855|gb|ABC91918.1| ATP-dependent RNA helicase protein [Rhizobium etli CFN 42]
Length = 560
Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 55/163 (33%), Positives = 91/163 (55%), Gaps = 8/163 (4%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKACSNPSIV 74
DIL++TP RL + R+ I L+ V YLVLDEAD++ ++G + L+ I +V P
Sbjct: 148 DILVATPGRLLDLVNRRAITLTTVRYLVLDEADQMLDLGFVHDLRKIAKLV-----PKKR 202
Query: 75 RS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 133
++ LFSAT+P + +LA + D V+V V A++ ++Q + F G + K LR+S
Sbjct: 203 QTMLFSATMPKAIADLAGEYLVDPVKVEVTPPGKAADKVEQYVHFVGGKNDKTELLRKSL 262
Query: 134 AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E+ + ++F+++K A++L L IH + SQ Q
Sbjct: 263 TENPDGRAIVFLRTKHGAEKLMKHLDNIGYSVASIHGNKSQGQ 305
>gi|329891295|ref|ZP_08269638.1| putative ATP-dependent RNA helicase rhlE [Brevundimonas diminuta
ATCC 11568]
gi|328846596|gb|EGF96160.1| putative ATP-dependent RNA helicase rhlE [Brevundimonas diminuta
ATCC 11568]
Length = 589
Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 56/163 (34%), Positives = 89/163 (54%), Gaps = 9/163 (5%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
D+L++ P RL I++K +DLS E VLDEAD++ ++G I P+ + S R
Sbjct: 129 DVLVAAPGRLLDHIQQKTLDLSTCEIFVLDEADQMLDLG----FIKPIRQIVSRIPAKRQ 184
Query: 77 --LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLA-LRQSF 133
FSAT+P + +LA ++ D V+V V + T E IKQ +++ E+GK A L + F
Sbjct: 185 NLFFSATMPSEIGKLAGELLKDPVKVQVTPQATTVERIKQSVIWV--EQGKKRALLTELF 242
Query: 134 AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
++ L+F ++K A ++ L + AG IH + SQ Q
Sbjct: 243 SDPAYTRCLVFTKTKHGADKVAAYLEAGGVEAGAIHGNKSQPQ 285
>gi|307941598|ref|ZP_07656953.1| ATP-dependent RNA helicase RhlE [Roseibium sp. TrichSKD4]
gi|307775206|gb|EFO34412.1| ATP-dependent RNA helicase RhlE [Roseibium sp. TrichSKD4]
Length = 436
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 88/164 (53%), Gaps = 7/164 (4%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL + RK + L++ YLVLDEAD++ ++G + L+ I +V A +
Sbjct: 125 GTDILVATPGRLLDLVDRKAVHLNKASYLVLDEADQMLDLGFIHALRRIAGLV-AEKRQT 183
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ LFSAT+P +E+LAR+ +H RV V +E + Q + F ++ K L
Sbjct: 184 L---LFSATMPRQIEDLARTYLHKPERVEVAPAGKTAERVAQSVHFM-DQKAKSGFLVDM 239
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E + L+F ++K A+ L L + AG IH + SQ Q
Sbjct: 240 ICERADDTCLVFCRTKHGAERLMKRLVAAGVSAGSIHGNKSQNQ 283
>gi|149180848|ref|ZP_01859350.1| ATP-dependent RNA helicase, DEAD/DEAH box family protein [Bacillus
sp. SG-1]
gi|148851367|gb|EDL65515.1| ATP-dependent RNA helicase, DEAD/DEAH box family protein [Bacillus
sp. SG-1]
Length = 496
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 92/165 (55%), Gaps = 9/165 (5%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
+ I++ TP R+ I R IDLS + LVLDEAD++ +G LK ++ +++ P
Sbjct: 121 NVGIVVGTPGRILDHIGRGTIDLSELNSLVLDEADQMLHIG-FLKEVEMIIRET--PKTR 177
Query: 75 RSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAG--SEEGKLLALRQ 131
++L FSAT+PD ++ LA+ M + V RK ++S++QK VF +++ L+ + +
Sbjct: 178 QTLLFSATIPDEIKTLAKKHMKSPEYISVERKQGPAKSVEQKAVFVNDRAKQATLIEMIK 237
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L +IF ++K R +LY LA + +H DLSQ +
Sbjct: 238 EYRPYL---AVIFCRTKRRVTKLYEALASEGFMCDELHGDLSQAK 279
>gi|294673582|ref|YP_003574198.1| DEAD/DEAH box helicase [Prevotella ruminicola 23]
gi|294472821|gb|ADE82210.1| ATP-dependent helicase, DEAD/DEAH box family [Prevotella ruminicola
23]
Length = 446
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 89/164 (54%), Gaps = 4/164 (2%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ D+LI+TP RL ++ +DLSR + VLDEAD++ ++G ++ I +VK S
Sbjct: 124 RMGADVLIATPGRLLSHLKVGNLDLSRCSFFVLDEADRMLDMG-FIEDIMKIVKELP-AS 181
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
R +FSAT+P + ELA ++H+ V + + A E I Q + + E KL ++
Sbjct: 182 CQRIMFSATMPKKIRELAVQLLHNPVEIQIAVSKPA-EKIHQ-MAYVCYEPQKLKIIQDI 239
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
F + V+IF K+R KE+ +L I +HSDLSQ +
Sbjct: 240 FKKGDLQRVIIFSGKKERVKEVTRKLKSMHINCDQMHSDLSQAE 283
>gi|402847520|ref|ZP_10895803.1| DEAD/DEAH box helicase [Porphyromonas sp. oral taxon 279 str.
F0450]
gi|402266180|gb|EJU15625.1| DEAD/DEAH box helicase [Porphyromonas sp. oral taxon 279 str.
F0450]
Length = 460
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 89/164 (54%), Gaps = 10/164 (6%)
Query: 14 FSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG---NLLKHIDPVVKACSN 70
+I+I+TP RL + ++ DLS V Y VLDEAD++ ++G ++++ + K C
Sbjct: 124 LGAEIVIATPGRLLALMNLQQADLSGVTYFVLDEADRMLDMGFQEDIMQINSALPKGCQ- 182
Query: 71 PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
R +FSAT+P +++ AR+I+H+ V + + ESI Q + E KL L
Sbjct: 183 ----RVMFSATMPPKIKKFARTILHNPAEVELA-ISRPPESIVQS-AYVCYERQKLPILT 236
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
Q F E+ +IF SK + KEL L+ IR +HSDL+Q
Sbjct: 237 QLFRETPPTRTIIFSSSKLKVKELTAALSRLSIRVEQMHSDLTQ 280
>gi|395233486|ref|ZP_10411726.1| ATP-dependent RNA helicase RhlE [Enterobacter sp. Ag1]
gi|394732213|gb|EJF31920.1| ATP-dependent RNA helicase RhlE [Enterobacter sp. Ag1]
Length = 465
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 85/164 (51%), Gaps = 7/164 (4%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ D+L++TP RL + + L ++E LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQIEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 73 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
R LFSAT D ++ LA ++H+ V V R+NTASE + Q + F + + L L
Sbjct: 179 ARRQNLLFSATFSDDIKALAEKLLHNPEEVEVARRNTASEQVTQHVHFVDKKRKREL-LS 237
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
Q E VL+F ++K A L +L D I A IH + SQ
Sbjct: 238 QMIGEGNWQQVLVFTRTKHGANHLAEQLQKDGITAAAIHGNKSQ 281
>gi|323493912|ref|ZP_08099029.1| ATP-dependent RNA helicase [Vibrio brasiliensis LMG 20546]
gi|323311853|gb|EGA65000.1| ATP-dependent RNA helicase [Vibrio brasiliensis LMG 20546]
Length = 419
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 86/160 (53%), Gaps = 3/160 (1%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
CDILI+TP RL + K I+L + EYLVLDEAD++ ++G + I +++ C N
Sbjct: 128 GCDILIATPGRLIDHMYCKNINLHKTEYLVLDEADRMLDMG-FMPDIKRILQRC-NDDRQ 185
Query: 75 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
FSAT ++ +A ++ + V V V N+ +E++KQ +V+ ++ K L
Sbjct: 186 TLFFSATFDKRIKTIAYRMLEEPVEVQVSPSNSTAETVKQ-MVYPVDKKRKAELLAYLIG 244
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
VL+F ++K + L EL D I+A I+ D SQ
Sbjct: 245 SRNWQQVLVFTKTKQGSDALAKELKLDGIKAASINGDKSQ 284
>gi|317047409|ref|YP_004115057.1| DEAD/DEAH box helicase [Pantoea sp. At-9b]
gi|316949026|gb|ADU68501.1| DEAD/DEAH box helicase domain protein [Pantoea sp. At-9b]
Length = 451
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 95/167 (56%), Gaps = 13/167 (7%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ D+L++TP RL + +DLS VE LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDVLVATPGRLLDLAHQNAVDLSHVEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 73 IVRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK-LLAL- 129
++ LFSAT D ++ LA ++++ +V V R+NTASE + Q++ F + + LL+L
Sbjct: 180 KRQNLLFSATFSDEIKSLAEKLLNNPEQVEVARRNTASEQVSQQVHFVDKKRKRELLSLM 239
Query: 130 --RQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
R ++ + VL+F ++K A L +L D I A IH + SQ
Sbjct: 240 IGRDNWQQ-----VLVFTRTKHGANHLAEQLNKDGITAAAIHGNKSQ 281
>gi|405969278|gb|EKC34259.1| Putative ATP-dependent RNA helicase an3 [Crassostrea gigas]
Length = 774
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 60/171 (35%), Positives = 91/171 (53%), Gaps = 6/171 (3%)
Query: 10 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
DL + C +L++TP RL + R KI L ++L LDEAD++ ++G + V K
Sbjct: 422 DLDR-GCHLLVATPGRLVDMLERGKIGLEHCKFLCLDEADRMLDMGFEPQIRRIVEKDNM 480
Query: 70 NPSIVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK-- 125
PS VR +FSAT P ++ LAR + + + + VGR + SE+I QK+V+ E +
Sbjct: 481 PPSGVRQTLMFSATFPKEIQMLARDFLDNYIFLAVGRVGSTSENITQKVVWVEEMEKRSF 540
Query: 126 LLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
LL L + A + L+FV++K A L L + A IH D SQ +
Sbjct: 541 LLDLLNA-AAGPDSLTLVFVETKKGADSLEDFLIREGYPATSIHGDRSQKE 590
>gi|372210459|ref|ZP_09498261.1| DEAD/DEAH box helicase [Flavobacteriaceae bacterium S85]
Length = 605
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 54/167 (32%), Positives = 93/167 (55%), Gaps = 9/167 (5%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
K I++ TP R I R+K+ L +++LVLDEAD++ +G +D V++A P
Sbjct: 120 KKGAQIVVGTPGRTVDLISRRKLKLENIQWLVLDEADEMLNMG-FKDDLDAVLEA--TPE 176
Query: 73 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
++L FSAT P VE +AR+ M++ V G KNT S+++ + + +E + A+++
Sbjct: 177 TKQTLLFSATFPKEVEAIARNYMYNPAEVEAGTKNTGSDNVSNEY-YVVTERNRYAAIKR 235
Query: 132 SFAESLNPPV--LIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+NP + +IF +++ +E+ +L D A +H DLSQ Q
Sbjct: 236 --IADINPDIYGIIFCRTRRECQEVSEKLIADGYNADSLHGDLSQAQ 280
>gi|343502075|ref|ZP_08739937.1| ATP-dependent RNA helicase [Vibrio tubiashii ATCC 19109]
gi|418478063|ref|ZP_13047178.1| ATP-dependent RNA helicase [Vibrio tubiashii NCIMB 1337 = ATCC
19106]
gi|342815654|gb|EGU50567.1| ATP-dependent RNA helicase [Vibrio tubiashii ATCC 19109]
gi|384574338|gb|EIF04810.1| ATP-dependent RNA helicase [Vibrio tubiashii NCIMB 1337 = ATCC
19106]
Length = 419
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 94/169 (55%), Gaps = 4/169 (2%)
Query: 6 VRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVV 65
V++ +LS+ CDILI+TP RL + K I+L + +YL+LDEAD++ ++G + I ++
Sbjct: 120 VQTRNLSE-GCDILIATPGRLLDHMFCKNINLFKTQYLILDEADRMLDMG-FMPDIKRIL 177
Query: 66 KACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK 125
K C N FSAT ++ +A ++++ V V V N+ +E++KQ +V+ ++ K
Sbjct: 178 KRC-NEERQTLFFSATFDKRIKTIAYKMLNEPVEVQVTPSNSTAETVKQ-MVYPVDKKRK 235
Query: 126 LLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
L VL+F ++K + L EL D I+A I+ D SQ
Sbjct: 236 AELLAYLIGSRNWQQVLVFTKTKQGSDALAKELKLDGIKAASINGDKSQ 284
>gi|307109616|gb|EFN57854.1| hypothetical protein CHLNCDRAFT_6836, partial [Chlorella
variabilis]
Length = 461
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 83/168 (49%), Gaps = 13/168 (7%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-- 70
K C++ + TP R+ IR K ++ R YLV DEAD++F++G +P V++
Sbjct: 184 KAGCEVAVCTPGRMIDLIRMKACNMKRATYLVFDEADRMFDMG-----FEPQVRSIMGQI 238
Query: 71 -PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFA---GSEEGKL 126
P LFSAT+P VE LA + VR+ VG A+E IKQ + GS++ L
Sbjct: 239 RPDRQTLLFSATMPRKVERLAGDALTSPVRITVGEVGGANEDIKQVVEVVHDLGSKQKWL 298
Query: 127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
L Q F + + VL+F K R EL L + IH D+ Q
Sbjct: 299 LDRLQRFIDDGD--VLVFANQKARVDELAAALQAAGAKVAAIHGDMDQ 344
>gi|372270479|ref|ZP_09506527.1| ATP-dependent RNA helicase RhlE [Marinobacterium stanieri S30]
Length = 420
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 89/168 (52%), Gaps = 15/168 (8%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG------NLLKHIDPVVK 66
K DIL++TP RL +++KK+ L+++E LVLDEAD++ ++G LL ++ P K
Sbjct: 110 KRGADILVATPGRLLDMLKQKKLSLAQLEMLVLDEADRMLDLGFINDIRQLLGYM-PEQK 168
Query: 67 ACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 126
LFSATL VE LA +++ R+ V R+NTAS+ +KQ +A + K
Sbjct: 169 QT-------LLFSATLNGSVEALAEALLQQPERIQVARRNTASQQVKQS-AYAVTNADKT 220
Query: 127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
L L+F ++K RA ++ EL + I A IH D Q
Sbjct: 221 DVLLYLIRGGNWQQTLVFTRTKRRADQVAEELQQEGISAVAIHGDRHQ 268
>gi|258648442|ref|ZP_05735911.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Prevotella
tannerae ATCC 51259]
gi|260851194|gb|EEX71063.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Prevotella
tannerae ATCC 51259]
Length = 484
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 86/171 (50%), Gaps = 18/171 (10%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG------NLLKHIDPVVK 66
K DI+I+TP RL + DLSR +LVLDEAD++ ++G ++KH+
Sbjct: 129 KRGADIVIATPGRLLTHLDLGTFDLSRTTHLVLDEADRMLDMGFSDDILKIVKHL----- 183
Query: 67 ACSNPSIVRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK 125
P ++ LFSAT+P + ELA IMH+ V + A E+I+Q L F E K
Sbjct: 184 ----PEQRQTILFSATMPAKIRELAHKIMHNPEEVSIAISKPA-ENIRQSL-FICKENDK 237
Query: 126 LLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
++ FA+ V+IF SK + KEL L +HSDL Q Q
Sbjct: 238 TAIIKHLFADQKPERVIIFCGSKQKVKELNITLKRKGYNVEAMHSDLEQKQ 288
>gi|71019993|ref|XP_760227.1| hypothetical protein UM04080.1 [Ustilago maydis 521]
gi|74701057|sp|Q4P733.1|DED1_USTMA RecName: Full=ATP-dependent RNA helicase DED1
gi|46099796|gb|EAK85029.1| hypothetical protein UM04080.1 [Ustilago maydis 521]
Length = 672
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 54/164 (32%), Positives = 87/164 (53%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L +TP RL + R +I LS V +LVLDEAD++ ++G I +V+ P ++
Sbjct: 326 CDLLSATPGRLVDLMERGRISLSNVRFLVLDEADRMLDMG-FEPQIRRIVEGEDMPGVMD 384
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LA+ + + V + VGR + SE+I QK+ + ++ + + L
Sbjct: 385 RQTLMFSATFPRDIQLLAKDFLKEYVFLSVGRVGSTSENITQKIEYVEDDDKRSVLLDVL 444
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ LIFV++K A L L I A IH D +Q +
Sbjct: 445 ASMPSGGLTLIFVETKRMADMLSDFLLRSKIGATSIHGDRTQRE 488
>gi|403216375|emb|CCK70872.1| hypothetical protein KNAG_0F02050 [Kazachstania naganishii CBS
8797]
Length = 533
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 92/167 (55%), Gaps = 7/167 (4%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
C I+++TP RL ++ ++LS+V YLVLDEAD++ E G + I +++ +
Sbjct: 242 CHIVVATPGRLLDLLQEGSVNLSKVNYLVLDEADRMLEKG-FEEDIKNIIRETAPHGRQT 300
Query: 76 SLFSATLPDFVEELARSIMHDAVRVIVGRKN--TASESIKQ--KLVFAGSEEGKLLALRQ 131
+F+AT P V ELA + M+ V+V +G ++ +A++ IKQ ++V S++ KLL L +
Sbjct: 301 LMFTATWPKEVRELAATFMNQPVKVSIGNRDELSANKRIKQIVEVVEQRSKDRKLLDLLK 360
Query: 132 SFAESL--NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + VLIF K A + L ++ IH DL+Q Q
Sbjct: 361 KYQSGAKKDEKVLIFALYKKEAARVERNLKYNGYNVVAIHGDLTQQQ 407
>gi|260947802|ref|XP_002618198.1| hypothetical protein CLUG_01657 [Clavispora lusitaniae ATCC 42720]
gi|238848070|gb|EEQ37534.1| hypothetical protein CLUG_01657 [Clavispora lusitaniae ATCC 42720]
Length = 692
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 51/164 (31%), Positives = 86/164 (52%), Gaps = 5/164 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++ P RL + R ++ L V+YLVLDEAD++ ++G I +V+ C P +
Sbjct: 358 CDLLVAAPGRLTDLLERGRVSLCNVKYLVLDEADRMLDMG-FEPQIRHIVQECDMPDVQD 416
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + D V + VGR + S +I QK++ +E + + L
Sbjct: 417 RQTLMFSATFPRNIQMLARDFLKDYVFLSVGRVGSTSANITQKVLLVEDDEKRSVIL-DL 475
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + N ++F ++K A L L A IH + +Q +
Sbjct: 476 LSAADNGLTIVFTETKRMADYLADFLYDQGFPATAIHGNRTQYE 519
>gi|163800373|ref|ZP_02194274.1| hypothetical protein 1103602000595_AND4_06819 [Vibrio sp. AND4]
gi|159175816|gb|EDP60610.1| hypothetical protein AND4_06819 [Vibrio sp. AND4]
Length = 430
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 88/161 (54%), Gaps = 3/161 (1%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
DIL++TP RL I + + ++ +++LV DEAD++ ++G + ++ +NP I+
Sbjct: 124 GVDILVATPGRLEEHIEQGNVSVANIDFLVFDEADRILDMGFIHAVRKIMLDVDTNPQIM 183
Query: 75 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
+FSAT + LA+ I+H R+ V R NT +++I +++ +E K L +
Sbjct: 184 --MFSATTSSQLNLLAKDILHKPKRIEVERANTTAQTIAH-VLYPVDQERKTELLSELIG 240
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
VL+FV K+ A ++ EL D I+A V H D +Q+
Sbjct: 241 RKNWRQVLVFVNYKETANDVVKELKLDGIKAVVCHGDRAQS 281
>gi|83950175|ref|ZP_00958908.1| putative ATP-dependent RNA helicase protein [Roseovarius
nubinhibens ISM]
gi|83838074|gb|EAP77370.1| putative ATP-dependent RNA helicase protein [Roseovarius
nubinhibens ISM]
Length = 431
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 88/164 (53%), Gaps = 7/164 (4%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL + R+ +DL V +LVLDEAD++ ++G + L+ I P +
Sbjct: 125 GTDILVATPGRLIDLMDRRAVDLGSVRHLVLDEADQMLDLGFIHALRKIAPRLGTPRQ-- 182
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
LFSAT+P +EEL+R+ + + +V V A++ I Q + F + K LR+
Sbjct: 183 --TMLFSATMPKQMEELSRAYLENPRKVQVSPPGKAADKITQSVHFL-EKPAKPSKLREI 239
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ ++ L+F ++K A++L L D A IH + SQ Q
Sbjct: 240 LSRDMDALTLVFSRTKHGAEKLMKGLVADGYNAASIHGNKSQGQ 283
>gi|190407035|gb|EDV10302.1| ATP dependent RNA helicase [Saccharomyces cerevisiae RM11-1a]
gi|207345345|gb|EDZ72198.1| YGL078Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259146428|emb|CAY79685.1| Dbp3p [Saccharomyces cerevisiae EC1118]
gi|365765558|gb|EHN07065.1| Dbp3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 523
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 88/165 (53%), Gaps = 7/165 (4%)
Query: 18 ILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 77
++++TP RL ++ +DLS+V YLVLDEAD++ E G + I +++ +
Sbjct: 234 VVVATPGRLLDLLQEGSVDLSQVNYLVLDEADRMLEKG-FEEDIKNIIRETDASKRQTLM 292
Query: 78 FSATLPDFVEELARSIMHDAVRVIVGRKN--TASESIKQ--KLVFAGSEEGKLLALRQSF 133
F+AT P V ELA + M++ ++V +G + TA++ I Q ++V +E KLL L + +
Sbjct: 293 FTATWPKEVRELASTFMNNPIKVSIGNTDQLTANKRITQIVEVVDPRGKERKLLELLKKY 352
Query: 134 --AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
N VLIF K A + L ++ IH DLSQ Q
Sbjct: 353 HSGPKKNEKVLIFALYKKEAARVERNLKYNGYNVAAIHGDLSQQQ 397
>gi|398364607|ref|NP_011437.3| RNA-dependent ATPase DBP3 [Saccharomyces cerevisiae S288c]
gi|1708151|sp|P20447.2|DBP3_YEAST RecName: Full=ATP-dependent RNA helicase DBP3; AltName: Full=DEAD
box protein 3; AltName: Full=Helicase CA3
gi|172582|gb|AAA73137.1| unnamed protein product [Saccharomyces cerevisiae]
gi|1322595|emb|CAA96783.1| DBP3 [Saccharomyces cerevisiae]
gi|285812127|tpg|DAA08027.1| TPA: RNA-dependent ATPase DBP3 [Saccharomyces cerevisiae S288c]
gi|392299185|gb|EIW10279.1| Dbp3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 523
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 88/165 (53%), Gaps = 7/165 (4%)
Query: 18 ILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 77
++++TP RL ++ +DLS+V YLVLDEAD++ E G + I +++ +
Sbjct: 234 VVVATPGRLLDLLQEGSVDLSQVNYLVLDEADRMLEKG-FEEDIKNIIRETDASKRQTLM 292
Query: 78 FSATLPDFVEELARSIMHDAVRVIVGRKN--TASESIKQ--KLVFAGSEEGKLLALRQSF 133
F+AT P V ELA + M++ ++V +G + TA++ I Q ++V +E KLL L + +
Sbjct: 293 FTATWPKEVRELASTFMNNPIKVSIGNTDQLTANKRITQIVEVVDPRGKERKLLELLKKY 352
Query: 134 --AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
N VLIF K A + L ++ IH DLSQ Q
Sbjct: 353 HSGPKKNEKVLIFALYKKEAARVERNLKYNGYNVAAIHGDLSQQQ 397
>gi|349578148|dbj|GAA23314.1| K7_Dbp3p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 523
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 88/165 (53%), Gaps = 7/165 (4%)
Query: 18 ILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 77
++++TP RL ++ +DLS+V YLVLDEAD++ E G + I +++ +
Sbjct: 234 VVVATPGRLLDLLQEGSVDLSQVNYLVLDEADRMLEKG-FEEDIKNIIRETDASKRQTLM 292
Query: 78 FSATLPDFVEELARSIMHDAVRVIVGRKN--TASESIKQ--KLVFAGSEEGKLLALRQSF 133
F+AT P V ELA + M++ ++V +G + TA++ I Q ++V +E KLL L + +
Sbjct: 293 FTATWPKEVRELASTFMNNPIKVSIGNTDQLTANKRITQIVEVVDPRGKERKLLELLKKY 352
Query: 134 --AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
N VLIF K A + L ++ IH DLSQ Q
Sbjct: 353 HSGPKKNEKVLIFALYKKEAARVERNLKYNGYNVAAIHGDLSQQQ 397
>gi|295107314|emb|CBL04857.1| Superfamily II DNA and RNA helicases [Gordonibacter pamelaeae
7-10-1-b]
Length = 445
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 92/169 (54%), Gaps = 7/169 (4%)
Query: 11 LSKFS--CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKAC 68
LSK S DIL++TP RL + R + L VE LVLDEAD++ ++G + +V A
Sbjct: 149 LSKLSRGVDILVATPGRLHDLMERGDVKLRDVEILVLDEADRMLDMG-FWPTMKKIVAA- 206
Query: 69 SNPSIVRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLL 127
PS ++ LFSATL V + +I+ D V V K S++I+Q +V GS + K
Sbjct: 207 -TPSSRQTLLFSATLDRKVMQSVSAILRDPAFVEVAHKGETSDTIEQFIVPVGSMQ-KAS 264
Query: 128 ALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
LR AE + V++F +K RA+ G+L RA IHSD +Q Q
Sbjct: 265 LLRLLLAERGSKRVIVFTDTKTRAEICTGQLKRAGFRAESIHSDKTQAQ 313
>gi|256269719|gb|EEU04989.1| Dbp3p [Saccharomyces cerevisiae JAY291]
Length = 523
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 88/165 (53%), Gaps = 7/165 (4%)
Query: 18 ILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 77
++++TP RL ++ +DLS+V YLVLDEAD++ E G + I +++ +
Sbjct: 234 VVVATPGRLLDLLQEGSVDLSQVNYLVLDEADRMLEKG-FEEDIKNIIRETDASKRQTLM 292
Query: 78 FSATLPDFVEELARSIMHDAVRVIVGRKN--TASESIKQ--KLVFAGSEEGKLLALRQSF 133
F+AT P V ELA + M++ ++V +G + TA++ I Q ++V +E KLL L + +
Sbjct: 293 FTATWPKEVRELASTFMNNPIKVSIGNTDQLTANKRITQIVEVVDPRGKERKLLELLKKY 352
Query: 134 --AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
N VLIF K A + L ++ IH DLSQ Q
Sbjct: 353 HSGPKKNEKVLIFALYKKEAARVERNLKYNGYNVAAIHGDLSQQQ 397
>gi|41282082|ref|NP_571016.2| pl10 [Danio rerio]
gi|37590512|gb|AAH59794.1| Pl10 [Danio rerio]
Length = 688
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 3/167 (1%)
Query: 10 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
DL + C +L++TP RL + R KI L YLVLDEAD++ ++G + V +
Sbjct: 344 DLER-GCHLLVATPGRLLDMMERGKIGLDYCNYLVLDEADRMLDMGFEPQIRRIVEQDTM 402
Query: 70 NPSIVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLL 127
P +R +FSAT P ++ LAR + D + + VGR + SE+I QK+V+ + +
Sbjct: 403 PPKGLRQTMMFSATFPKEIQILARDFLEDYIFLAVGRVGSTSENITQKVVWVEENDKRSF 462
Query: 128 ALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
L A + L+FV++K A L L + IH D SQ
Sbjct: 463 LLDLLNATGKDSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQ 509
>gi|323355122|gb|EGA86952.1| Dbp3p [Saccharomyces cerevisiae VL3]
Length = 537
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 88/165 (53%), Gaps = 7/165 (4%)
Query: 18 ILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 77
++++TP RL ++ +DLS+V YLVLDEAD++ E G + I +++ +
Sbjct: 234 VVVATPGRLLDLLQEGSVDLSQVNYLVLDEADRMLEKG-FEEDIKNIIRETDASKRQTLM 292
Query: 78 FSATLPDFVEELARSIMHDAVRVIVGRKN--TASESIKQ--KLVFAGSEEGKLLALRQSF 133
F+AT P V ELA + M++ ++V +G + TA++ I Q ++V +E KLL L + +
Sbjct: 293 FTATWPKEVRELASTFMNNPIKVSIGNTDQLTANKRITQIVEVVDPRGKERKLLELLKKY 352
Query: 134 --AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
N VLIF K A + L ++ IH DLSQ Q
Sbjct: 353 HSGPKKNEKVLIFALYKKEAARVERNLKYNGYNVAAIHGDLSQQQ 397
>gi|222086716|ref|YP_002545250.1| ATP-dependent RNA helicase [Agrobacterium radiobacter K84]
gi|221724164|gb|ACM27320.1| ATP-dependent RNA helicase protein [Agrobacterium radiobacter K84]
Length = 556
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 52/162 (32%), Positives = 89/162 (54%), Gaps = 6/162 (3%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKACSNPSIV 74
DIL++TP RL I R+ + L +V YLVLDEAD++ ++G + L+ I +V A
Sbjct: 143 DILVATPGRLLDLISRRALSLGQVSYLVLDEADQMLDLGFIHDLRKISKMVPAKRQTM-- 200
Query: 75 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
LFSAT+P + +LA + + V+V V A++ ++Q + F + K L++S +
Sbjct: 201 --LFSATMPKTIADLAAEYLTNPVKVEVSPPGKAADKVEQYVHFVSGQNHKTEILKESIS 258
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + ++F+++K A++L L A IH + SQ Q
Sbjct: 259 ANPDGRAMVFLRTKHGAEKLMKHLEHVGFAAASIHGNKSQGQ 300
>gi|357059925|ref|ZP_09120700.1| hypothetical protein HMPREF9332_00257 [Alloprevotella rava F0323]
gi|355377113|gb|EHG24347.1| hypothetical protein HMPREF9332_00257 [Alloprevotella rava F0323]
Length = 421
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 88/168 (52%), Gaps = 12/168 (7%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
K DI+I+TP RL + +DLS +L+LDEAD++ ++G D ++K
Sbjct: 129 KQGADIVIATPGRLLTHLDLGNLDLSHTTHLILDEADRMLDMG----FSDDILKIVKQLP 184
Query: 73 IVRS--LFSATLPDFVEELARSIMHDA--VRVIVGRKNTASESIKQKLVFAGSEEGKLLA 128
R LFSAT+PD +++ ARSIMH+ +R+ V + +E I+Q ++ E K
Sbjct: 185 EKRQTILFSATMPDTIDKFARSIMHNPEEIRLAVSK---PAEKIQQS-IYVCRETDKNTI 240
Query: 129 LRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+R F + V+IF SK + KEL+ L +HSDL Q Q
Sbjct: 241 IRHLFKQCKPERVIIFCSSKQKVKELHILLKRAHFNCEAMHSDLLQQQ 288
>gi|410666158|ref|YP_006918529.1| ATP-dependent RNA helicase DbpA [Simiduia agarivorans SA1 = DSM
21679]
gi|409028515|gb|AFV00800.1| ATP-dependent RNA helicase DbpA [Simiduia agarivorans SA1 = DSM
21679]
Length = 264
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 78/135 (57%), Gaps = 5/135 (3%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
I++ TP R+ +R+ K+DLS V LVLDEAD++ ++G + +D +V P+
Sbjct: 123 GAHIVVGTPGRIEEHVRKGKLDLSEVHTLVLDEADRMLDMG-FQETVDAIV--AGTPAAR 179
Query: 75 RS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 133
+S LFSAT PD +E LA ++H+ VR+ V K++A ++I Q G+ E +L A+ Q
Sbjct: 180 QSLLFSATYPDSIEALAARVLHNPVRITVESKHSA-QTINQHFYRVGNNEQRLAAVAQLL 238
Query: 134 AESLNPPVLIFVQSK 148
+IF+Q +
Sbjct: 239 WHFQPGSAVIFLQHQ 253
>gi|85058891|ref|YP_454593.1| ATP-dependent RNA helicase RhlE [Sodalis glossinidius str.
'morsitans']
gi|84779411|dbj|BAE74188.1| putative ATP-dependent RNA helicase [Sodalis glossinidius str.
'morsitans']
Length = 453
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 91/163 (55%), Gaps = 5/163 (3%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ ++L++TP RL +++ +DLS+VE LVLDEAD++ ++G + I V+K P+
Sbjct: 124 RGGVEVLVATPGRLLDLAQQRAVDLSQVEILVLDEADRMLDMG-FIHDIRRVMKLL--PT 180
Query: 73 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
+SL FSAT D ++ LA S++ + V V R+NTASE I Q V ++ K L
Sbjct: 181 KRQSLMFSATFSDEIKTLANSLLDNPASVEVARRNTASEQITQ-FVHMVDKKRKRELLSD 239
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ VL+F ++K A L +L D I A IH + SQ
Sbjct: 240 MIGRNNWQQVLVFTRTKHGANHLAEQLNKDGITAAAIHGNKSQ 282
>gi|373462005|ref|ZP_09553738.1| hypothetical protein HMPREF9944_02002 [Prevotella maculosa OT 289]
gi|371950182|gb|EHO68040.1| hypothetical protein HMPREF9944_02002 [Prevotella maculosa OT 289]
Length = 524
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 90/165 (54%), Gaps = 10/165 (6%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG---NLLKHIDPVVKACS 69
+ D++I+TP RL I +DLS+V + +LDEAD++ ++G ++LK + K C
Sbjct: 124 QLGADVVIATPGRLISHISLGNVDLSKVSFFILDEADRMLDMGFSDDILKIAKELPKTCQ 183
Query: 70 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 129
+FSAT+PD +EELA++++ + +VI + +E I+Q + E K+ +
Sbjct: 184 T-----IMFSATMPDKIEELAKTLLKNP-KVIKLAVSKPAEKIRQS-AYVCHETQKMGII 236
Query: 130 RQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ F V+IF SK + K++ G L I G +HSDL Q
Sbjct: 237 KDIFKNGDLKRVIIFCGSKMKVKQVAGALQRKHINCGEMHSDLDQ 281
>gi|254417807|ref|ZP_05031531.1| DEAD/DEAH box helicase domain protein [Brevundimonas sp. BAL3]
gi|196183984|gb|EDX78960.1| DEAD/DEAH box helicase domain protein [Brevundimonas sp. BAL3]
Length = 510
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 93/165 (56%), Gaps = 9/165 (5%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-PSI 73
DIL++ P RL I++K +DLS E LVLDEAD++ ++G I P+ + S P+
Sbjct: 139 GLDILVAAPGRLLDHIQQKNLDLSSTEILVLDEADQMLDLG----FIKPIRQIVSRIPAK 194
Query: 74 VRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLA-LRQ 131
++L FSAT+P + +LA ++ D V+V V ++T + I Q +V E+G+ A L +
Sbjct: 195 RQNLFFSATMPTEIGKLAGELLKDPVKVQVTPQSTTVQRISQSVVHV--EQGRKRALLTE 252
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
F++ L+F ++K A ++ L + AG IH + SQ Q
Sbjct: 253 MFSDPEYTRCLVFTKTKHGADKVAAYLEAGGVEAGAIHGNKSQPQ 297
>gi|365834093|ref|ZP_09375542.1| ATP-dependent RNA helicase RhlE [Hafnia alvei ATCC 51873]
gi|364570434|gb|EHM48046.1| ATP-dependent RNA helicase RhlE [Hafnia alvei ATCC 51873]
Length = 465
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 88/163 (53%), Gaps = 5/163 (3%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ D+L++TP RL + +DLS+VE LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDVLVATPGRLLDLEHQHAVDLSKVEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 73 IVRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
++ LFSAT D ++ELA ++ + V V R+NTASE + Q + F + L L Q
Sbjct: 180 KRQNLLFSATFSDEIKELANKLLTNPASVEVARRNTASEQVAQSVHFVDKRRKREL-LSQ 238
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
VL+F ++K A L +L D I A IH + SQ
Sbjct: 239 LIGTHNWQQVLVFTRTKYGANHLAEQLNKDGITAAAIHGNKSQ 281
>gi|150376621|ref|YP_001313217.1| DEAD/DEAH box helicase [Sinorhizobium medicae WSM419]
gi|150031168|gb|ABR63284.1| DEAD/DEAH box helicase domain protein [Sinorhizobium medicae
WSM419]
Length = 498
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 92/165 (55%), Gaps = 8/165 (4%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL I RK + L++ YLVLDEAD++ ++G + L+ I +V P
Sbjct: 125 GVDILVATPGRLLDLISRKAVTLTQGRYLVLDEADQMLDLGFIHDLRKIAKLV-----PK 179
Query: 73 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
++L FSAT+P + ELA + D V+V V R A++ ++Q + F ++ K L+Q
Sbjct: 180 NRQTLLFSATMPKLIAELAGEYLTDPVKVEVTRPGKAADKVEQYVHFVPGKDLKTTILKQ 239
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + + L+F ++K A++L L +A IH + SQ Q
Sbjct: 240 TLTANPDGLSLVFSRTKHGAEKLMKHLDQVGFKAASIHGNKSQGQ 284
>gi|384254251|gb|EIE27725.1| DEAD-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 491
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 85/165 (51%), Gaps = 6/165 (3%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP--- 71
DIL++TP RL I R ++ LSR +YLVLDEAD++ ++G I +V A P
Sbjct: 181 GVDILVATPGRLSSFIERGRVSLSRTKYLVLDEADRMLDMG-FEPQIRSIVDATDMPKPG 239
Query: 72 SIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
S +FSAT P ++ELA M + + + VGR +++ I Q F E G L
Sbjct: 240 SRQTLMFSATFPKEIQELAADFMSNYLFLAVGRVGSSTNLIIQH--FEEVEPGDKQKLLV 297
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
S ++ L+FV++K A L L + A IH DLSQ +
Sbjct: 298 SLVRAVPGLTLVFVETKVWADRLEHFLVQNKFPATTIHGDLSQEE 342
>gi|34498347|ref|NP_902562.1| ATP-dependent RNA helicase [Chromobacterium violaceum ATCC 12472]
gi|34104201|gb|AAQ60560.1| ATP-dependent RNA helicase [Chromobacterium violaceum ATCC 12472]
Length = 439
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 88/160 (55%), Gaps = 4/160 (2%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
D++++TP RL +R +ID SR+E LVLDEAD++ ++G + I+ +VKA P ++
Sbjct: 126 DLIVATPGRLMDHMRSGRIDFSRLEMLVLDEADRMLDMG-FIDDIEAIVKAT--PETRQT 182
Query: 77 -LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 135
LFSATL V +A + D R+ + R T+ +I++ L++A K L E
Sbjct: 183 VLFSATLDGIVGRMAEKMTRDPQRIEIARTETSGGTIEEHLLYADDLNHKHRLLDYILKE 242
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
S +IF +K ++EL +L+ A +H D+ Q+
Sbjct: 243 SGFDQCVIFSATKAYSEELADKLSDQGYSAACLHGDMPQS 282
>gi|317492534|ref|ZP_07950962.1| DEAD/DEAH box helicase [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316919526|gb|EFV40857.1| DEAD/DEAH box helicase [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 465
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 88/163 (53%), Gaps = 5/163 (3%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ D+L++TP RL + +DLS+VE LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDVLVATPGRLLDLEHQHAVDLSKVEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 73 IVRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
++ LFSAT D ++ELA ++ + V V R+NTASE + Q + F + L L Q
Sbjct: 180 KRQNLLFSATFSDEIKELANKLLTNPASVEVARRNTASEQVAQSVHFVDKRRKREL-LSQ 238
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
VL+F ++K A L +L D I A IH + SQ
Sbjct: 239 LIGTHNWQQVLVFTRTKYGANHLAEQLNKDGITAAAIHGNKSQ 281
>gi|114765123|ref|ZP_01444268.1| putative ATP-dependent RNA helicase protein [Pelagibaca bermudensis
HTCC2601]
gi|114542527|gb|EAU45553.1| putative ATP-dependent RNA helicase protein [Roseovarius sp.
HTCC2601]
Length = 430
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 84/164 (51%), Gaps = 7/164 (4%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL + RK +DLS V LVLDEAD++ ++G + L+ I P +
Sbjct: 125 GTDILVATPGRLIDLMDRKAVDLSTVRQLVLDEADQMLDMGFIHALRRIAPQLGTPRQ-- 182
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
LFSAT+P +EEL+ + + + RV V A++ I Q + F + GK LR+
Sbjct: 183 --TMLFSATMPKQMEELSSAYLTNPRRVQVSPPGKAADKITQSVHFV-DKAGKPSKLREL 239
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L+F ++K A+ L L D A IH + SQ Q
Sbjct: 240 LGRDDESLTLVFARTKHGAERLMKGLVADGYNAASIHGNKSQGQ 283
>gi|197284517|ref|YP_002150389.1| ATP-dependent RNA helicase [Proteus mirabilis HI4320]
gi|194682004|emb|CAR41470.1| putative ATP-dependent RNA helicase [Proteus mirabilis HI4320]
Length = 465
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 89/165 (53%), Gaps = 9/165 (5%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG---NLLKHIDPVVKACS 69
+ D+LI+TP RL + +DLSRVE LVLDEAD++ ++G ++ + I+ + K
Sbjct: 124 RGGVDVLIATPGRLLDLEHQNAVDLSRVEVLVLDEADRMLDMGFIHDIRRVINKLPKKRQ 183
Query: 70 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 129
N LFSAT + LA S++++ + + V KN+A+ES+ Q V ++ K L
Sbjct: 184 N-----LLFSATFSKEITGLANSLLNNPISIAVAPKNSAAESVDQ-YVHLVDKKRKTELL 237
Query: 130 RQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
P VLIF ++K A +L L D I++ IH + SQ
Sbjct: 238 SHLIGLENWPQVLIFTRTKHGANKLAEHLNLDGIKSAAIHGNKSQ 282
>gi|227356697|ref|ZP_03841083.1| ATP-dependent RNA helicase [Proteus mirabilis ATCC 29906]
gi|425067413|ref|ZP_18470529.1| hypothetical protein HMPREF1311_00567 [Proteus mirabilis WGLW6]
gi|227163205|gb|EEI48136.1| ATP-dependent RNA helicase [Proteus mirabilis ATCC 29906]
gi|404601244|gb|EKB01657.1| hypothetical protein HMPREF1311_00567 [Proteus mirabilis WGLW6]
Length = 465
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 89/165 (53%), Gaps = 9/165 (5%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG---NLLKHIDPVVKACS 69
+ D+LI+TP RL + +DLSRVE LVLDEAD++ ++G ++ + I+ + K
Sbjct: 124 RGGVDVLIATPGRLLDLEHQNAVDLSRVEVLVLDEADRMLDMGFIHDIRRVINKLPKKRQ 183
Query: 70 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 129
N LFSAT + LA S++++ + + V KN+A+ES+ Q V ++ K L
Sbjct: 184 N-----LLFSATFSKEITGLANSLLNNPISIAVAPKNSAAESVDQ-YVHLVDKKRKTELL 237
Query: 130 RQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
P VLIF ++K A +L L D I++ IH + SQ
Sbjct: 238 SHLIGLENWPQVLIFTRTKHGANKLAEHLNLDGIKSAAIHGNKSQ 282
>gi|410625113|ref|ZP_11335901.1| ATP-dependent RNA helicase rhlB [Glaciecola mesophila KMM 241]
gi|410155244|dbj|GAC22670.1| ATP-dependent RNA helicase rhlB [Glaciecola mesophila KMM 241]
Length = 426
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 90/162 (55%), Gaps = 3/162 (1%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
K DI+ISTP RL + K ++L+ VE++VLDEAD++ ++G + + + S
Sbjct: 122 KAGVDIVISTPGRLLEHMTLKNVELANVEFVVLDEADRMLDMGFIADVRQMLAQITSAHQ 181
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ LFSAT+ V ELA ++ + + + N+A++++ Q +++ SEE K+ +
Sbjct: 182 TL--LFSATISPTVNELAHKLLKNHQEIRATQLNSAADTV-QHVMYPVSEEDKIRLFKTL 238
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
AE VL+F +K++A +L L I A V H+D SQ
Sbjct: 239 LAEQNWYQVLVFTSTKEQADKLMAALKTSKIDAAVCHADKSQ 280
>gi|292487709|ref|YP_003530582.1| ATP-dependent RNA helicase rhlE [Erwinia amylovora CFBP1430]
gi|292898944|ref|YP_003538313.1| ATP-dependent RNA helicase [Erwinia amylovora ATCC 49946]
gi|428784645|ref|ZP_19002136.1| putative ATP-dependent RNA helicase rhlE [Erwinia amylovora
ACW56400]
gi|291198792|emb|CBJ45901.1| putative ATP-dependent RNA helicase [Erwinia amylovora ATCC 49946]
gi|291553129|emb|CBA20174.1| putative ATP-dependent RNA helicase rhlE [Erwinia amylovora
CFBP1430]
gi|312171822|emb|CBX80079.1| putative ATP-dependent RNA helicase rhlE [Erwinia amylovora ATCC
BAA-2158]
gi|426276207|gb|EKV53934.1| putative ATP-dependent RNA helicase rhlE [Erwinia amylovora
ACW56400]
Length = 470
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 92/167 (55%), Gaps = 13/167 (7%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ D+L++TP RL + +DLS+VE LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDVLVATPGRLLDLEHQNALDLSKVEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 73 IVRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK----LL 127
++ LFSAT D ++ LA ++H+ +V V R+NTASE + Q + + + LL
Sbjct: 180 KRQNLLFSATFSDEIKTLAEKLLHNPEQVEVARRNTASEQVTQHVHLVDKKRKRELLSLL 239
Query: 128 ALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
R ++ + VL+F ++K A L +L D I A IH + SQ
Sbjct: 240 IGRGNWQQ-----VLVFTRTKHGANHLAEQLNKDGITAAAIHGNKSQ 281
>gi|2558533|emb|CAA73349.1| putative RNA helicase (DEAD box) [Danio rerio]
Length = 688
Score = 79.7 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 3/167 (1%)
Query: 10 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
DL + C +L++TP RL + R KI L YLVLDEAD++ ++G + V +
Sbjct: 344 DLER-GCHLLVATPGRLVDMMERGKIGLDYCNYLVLDEADRMLDMGFEPQIRRIVEQDTM 402
Query: 70 NPSIVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLL 127
P +R +FSAT P ++ LAR + D + + VGR + SE+I QK+V+ + +
Sbjct: 403 PPKGLRQTMMFSATFPKEIQILARDFLEDYIFLAVGRVGSTSENITQKVVWVEENDKRSF 462
Query: 128 ALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
L A + L+FV++K A L L + IH D SQ
Sbjct: 463 LLDLLNATGKDSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQ 509
>gi|410896268|ref|XP_003961621.1| PREDICTED: ATP-dependent RNA helicase DDX3Y-like [Takifugu
rubripes]
Length = 683
Score = 79.7 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 54/161 (33%), Positives = 82/161 (50%), Gaps = 2/161 (1%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
C +L++TP RL + R KI L YLVLDEAD++ ++G + V + P +R
Sbjct: 342 CHLLVATPGRLVDMMERGKIGLDYCNYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGIR 401
Query: 76 S--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 133
+FSAT P ++ LAR + D + + VGR + SE+I QK+V+ + + L
Sbjct: 402 QTMMFSATFPKEIQILARDFLEDYIFLAVGRVGSTSENITQKVVWVEEVDKRSFLLDLLN 461
Query: 134 AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
A + L+FV++K A L L + IH D SQ
Sbjct: 462 ATGKDSLTLVFVETKKGADSLEDFLYREGYACTSIHGDRSQ 502
>gi|313202644|ref|YP_004041301.1| dead/deah box helicase domain-containing protein [Paludibacter
propionicigenes WB4]
gi|312441960|gb|ADQ78316.1| DEAD/DEAH box helicase domain protein [Paludibacter propionicigenes
WB4]
Length = 621
Score = 79.7 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 52/162 (32%), Positives = 91/162 (56%), Gaps = 9/162 (5%)
Query: 18 ILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS- 76
I+++TP RL I R KI+L +++LVLDEAD++ +G + I+ +++ P R+
Sbjct: 124 IIVATPGRLIDLIERGKIELGAIDFLVLDEADEMLNMG-FKEDIETILE--RTPETRRTM 180
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
LFSAT+P + +A+ M + + VG KN SE+++ + + + L L++
Sbjct: 181 LFSATMPKEIANIAKRYMKNYEEITVGTKNAGSENVEH-IYYVSQARQRYLVLKRIV--D 237
Query: 137 LNPPV--LIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
LNP + ++F +++ KE+ +L D A +H DLSQ Q
Sbjct: 238 LNPDIYGIVFCRTRQETKEVADKLMHDGYNADALHGDLSQAQ 279
>gi|310790076|gb|EFQ25609.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 712
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 87/183 (47%), Gaps = 26/183 (14%)
Query: 16 CDILISTPLRL----RLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP 71
DIL++TP L + K L V L+LDEAD L + + + AC+NP
Sbjct: 351 VDILVTTPALLFNFLSSGSPKTKRKLPTVTSLILDEADVLLDP-LFREQTMAIWSACTNP 409
Query: 72 SIVRSLFSATLPDFVEEL------ARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK 125
+ + +SAT +E L AR +R++VG K+TA ++ KLV+ +E+GK
Sbjct: 410 ELRTTFWSATFGSNIETLVTEAQSARPESKPLIRLVVGLKDTAVPNVTHKLVYTATEKGK 469
Query: 126 LLALRQ--------SFAESLNPPVLIFVQSKDRAKELYGELAFD-------DIRAGVIHS 170
LL LRQ L PP L+F Q+ +RA L EL +D R +HS
Sbjct: 470 LLGLRQLLRPTAGDDSGPPLRPPFLVFTQTIERATALAEELKYDIPLAAGGSDRIAALHS 529
Query: 171 DLS 173
L+
Sbjct: 530 GLA 532
>gi|66807079|ref|XP_637262.1| DEAD/DEAH box helicase [Dictyostelium discoideum AX4]
gi|74996736|sp|Q54KG1.1|DDX41_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx41; AltName:
Full=DEAD box protein 41
gi|60465669|gb|EAL63748.1| DEAD/DEAH box helicase [Dictyostelium discoideum AX4]
Length = 671
Score = 79.7 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 56/161 (34%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 18 ILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS- 76
++I+TP RL + +KKI+ +YL LDEAD+L ++G D + N + R
Sbjct: 358 MIIATPGRLLDLLNKKKINFKLCKYLGLDEADRLIDLG----FEDDIRSVLDNFTNQRQT 413
Query: 77 -LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 135
LFSAT+P ++E ARS + V V VGR A+ ++ Q++ F E K++ L + +
Sbjct: 414 LLFSATMPKKIQEFARSALVLPVEVNVGRAGAANLNVTQEVEFV-KPEAKIVYLLECLQK 472
Query: 136 SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ PPVLIF ++K ++Y L + A IH D SQ +
Sbjct: 473 T-PPPVLIFCENKKDVDDIYEYLLLKQVEAVSIHGDKSQDE 512
>gi|334365759|ref|ZP_08514708.1| DEAD/DEAH box helicase [Alistipes sp. HGB5]
gi|313157865|gb|EFR57271.1| DEAD/DEAH box helicase [Alistipes sp. HGB5]
Length = 502
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 89/168 (52%), Gaps = 14/168 (8%)
Query: 14 FSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG---NLLKHIDPVVKACSN 70
D++I+TP R+ I+ IDLS VE L+LDEAD++ ++G +++K + + K
Sbjct: 124 MGSDVVIATPGRMISHIQNSGIDLSHVECLILDEADRMLDMGFSEDIMKIVSYMPKERQT 183
Query: 71 PSIVRSLFSATLPDFVEELARSIMHDA--VRVIVGRKNTASESIKQKLVFAGSEEGKLLA 128
+FSATLP + ELA++I+ + V + + + N E+I Q + E KL
Sbjct: 184 -----IMFSATLPPKIRELAKTILRNPAEVNIAISKPN---EAIDQS-AYVCYENQKLGI 234
Query: 129 LRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+R+ FAE +IF SK + KEL L + +HSDL Q Q
Sbjct: 235 IREMFAEPTESKTIIFSSSKMKVKELAHTLKRMKLNVAAMHSDLEQAQ 282
>gi|259909026|ref|YP_002649382.1| ATP-dependent RNA helicase RhlE [Erwinia pyrifoliae Ep1/96]
gi|387871953|ref|YP_005803329.1| ATP-dependent RNA helicase rhlE [Erwinia pyrifoliae DSM 12163]
gi|224964648|emb|CAX56162.1| Putative ATP-dependent RNA helicase [Erwinia pyrifoliae Ep1/96]
gi|283479042|emb|CAY74958.1| putative ATP-dependent RNA helicase rhlE [Erwinia pyrifoliae DSM
12163]
Length = 471
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 92/167 (55%), Gaps = 13/167 (7%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
+ D+L++TP RL + +DLS+VE LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDVLVATPGRLLDLEHQNALDLSKVEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 73 IVRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK----LL 127
++ LFSAT D ++ LA ++H+ +V V R+NTASE + Q + + + LL
Sbjct: 180 KRQNLLFSATFSDEIKTLAEKLLHNPEQVEVARRNTASEQVTQHVHLVDKKRKRELLSLL 239
Query: 128 ALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
R ++ + VL+F ++K A L +L D I A IH + SQ
Sbjct: 240 IGRGNWQQ-----VLVFTRTKHGANHLAEQLNKDGITAAAIHGNKSQ 281
>gi|269104692|ref|ZP_06157388.1| ATP-dependent RNA helicase [Photobacterium damselae subsp. damselae
CIP 102761]
gi|268161332|gb|EEZ39829.1| ATP-dependent RNA helicase [Photobacterium damselae subsp. damselae
CIP 102761]
Length = 430
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 87/160 (54%), Gaps = 3/160 (1%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
CDIL++TP RL + + + LS +E+LV DEAD++ ++G + + S P I+
Sbjct: 124 GCDILVATPGRLLEHLELQNVLLSNIEFLVFDEADRMLDMGFISAIRTILSNVNSTPQIM 183
Query: 75 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
LFSAT + +LA +++ R+ V +N+ +E++ +V+ EE K L +
Sbjct: 184 --LFSATFSSQMNKLAGELLNKPKRISVTPENSTAETVAH-VVYPVDEERKREMLSELIG 240
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ VL+FV K+ A +L EL D I+A + H D +Q
Sbjct: 241 KKNWQQVLVFVNYKETANQLVEELELDGIKAVLCHGDKAQ 280
>gi|398379083|ref|ZP_10537228.1| DNA/RNA helicase, superfamily II [Rhizobium sp. AP16]
gi|397723550|gb|EJK84044.1| DNA/RNA helicase, superfamily II [Rhizobium sp. AP16]
Length = 580
Score = 79.3 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 52/162 (32%), Positives = 89/162 (54%), Gaps = 6/162 (3%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKACSNPSIV 74
DIL++TP RL I R+ + L +V YLVLDEAD++ ++G + L+ I +V A
Sbjct: 169 DILVATPGRLLDLISRRALSLGQVSYLVLDEADQMLDLGFIHDLRKISKMVPAKRQTM-- 226
Query: 75 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 134
LFSAT+P + +LA + + V+V V A++ ++Q + F + K L++S +
Sbjct: 227 --LFSATMPKTIADLAAEYLTNPVKVEVSPPGKAADKVEQYVHFVSGQNHKTEILKESIS 284
Query: 135 ESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + ++F+++K A++L L A IH + SQ Q
Sbjct: 285 ANPDGRAMVFLRTKHGAEKLMKHLEHVGFAAASIHGNKSQGQ 326
>gi|302798402|ref|XP_002980961.1| hypothetical protein SELMODRAFT_51367 [Selaginella moellendorffii]
gi|300151500|gb|EFJ18146.1| hypothetical protein SELMODRAFT_51367 [Selaginella moellendorffii]
Length = 653
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 84/166 (50%), Gaps = 9/166 (5%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-- 70
K C+I+++TP RL ++ K + + R YLVLDEAD++F++G +P +++
Sbjct: 304 KAGCEIVVATPGRLIDMLKMKALTMFRATYLVLDEADRMFDLG-----FEPQIRSIVGQI 358
Query: 71 -PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 129
P LFSAT+P VE LAR ++ VRV G A+E + Q ++ KL +
Sbjct: 359 RPDRQTLLFSATMPRRVETLAREVLSAPVRVTAGEVGRANEDVTQVAQIVATDADKLQWM 418
Query: 130 RQSFAESLNPP-VLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ ++ VL+F +K R +EL L + +H D Q
Sbjct: 419 LSKLPQMVDAGDVLVFASTKVRVEELEKHLQDSGFKVAALHGDKDQ 464
>gi|355704727|gb|EHH30652.1| ATP-dependent RNA helicase DDX3X [Macaca mulatta]
Length = 662
Score = 79.3 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 3/167 (1%)
Query: 10 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
DL + C +L++TP RL + R KI L +YLVLDEAD++ ++G + V +
Sbjct: 312 DLER-GCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIHRKVEQDTM 370
Query: 70 NPSIVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLL 127
P VR +FSAT P ++ LAR + + + + VGR + SE+I QK+V+ + +
Sbjct: 371 PPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSF 430
Query: 128 ALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
L A + L+FV++K A L L + IH D SQ
Sbjct: 431 LLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQ 477
>gi|310658279|ref|YP_003936000.1| atp-dependent rna helicase, dead/deah box family [[Clostridium]
sticklandii]
gi|308825057|emb|CBH21095.1| atp-dependent rna helicase, dead/deah box family [[Clostridium]
sticklandii]
Length = 423
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 91/164 (55%), Gaps = 3/164 (1%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
K + ++ TP R+ IR I+ ++++V+DEAD++ G ++ +D +
Sbjct: 118 KNNAQFVVGTPGRILDHIREGSINFKNLKHVVIDEADQMMAFG-FMEDLDLLFDKTPQ-K 175
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
I + +FSAT+PD + +LAR IM++A+ + + ++ ++I+Q +V +EE +L +L +
Sbjct: 176 IQKMIFSATIPDMIRKLARKIMNNAINIDIDPESVVIDNIRQ-VVVRTTEERRLQSLEMA 234
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E +IF +SK+RA ELY + ++H D SQ +
Sbjct: 235 LKEFKPFMAMIFCKSKERANELYDNMVNLRYDVEILHGDFSQNK 278
>gi|347971748|ref|XP_001688456.2| AGAP004351-PA [Anopheles gambiae str. PEST]
gi|333469011|gb|EDO64138.2| AGAP004351-PA [Anopheles gambiae str. PEST]
Length = 713
Score = 79.3 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 51/164 (31%), Positives = 84/164 (51%), Gaps = 11/164 (6%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKAC---SNPSI 73
+ILI+TP RL ++ +D+S + YL+LDEAD++ ++G +P ++ P
Sbjct: 431 EILIATPGRLNDLVQEGVVDVSTITYLILDEADRMLDMG-----FEPQIRKVLLDVRPDR 485
Query: 74 VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 133
+ SAT PD V LA+S MHD ++V +G + A+ +++ EE K + + F
Sbjct: 486 QTVMTSATWPDGVRRLAQSYMHDPIQVYIGTLDLAATHTVTQVIEVMDEEDKFQRINE-F 544
Query: 134 AESLNP--PVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
+ P V+IF K RA +L E +I IH + Q+
Sbjct: 545 VRDMQPTDKVIIFCGKKTRADDLSSEFILSNISCQAIHGNREQS 588
>gi|302815317|ref|XP_002989340.1| hypothetical protein SELMODRAFT_41331 [Selaginella moellendorffii]
gi|300142918|gb|EFJ09614.1| hypothetical protein SELMODRAFT_41331 [Selaginella moellendorffii]
Length = 653
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 84/166 (50%), Gaps = 9/166 (5%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-- 70
K C+I+++TP RL ++ K + + R YLVLDEAD++F++G +P +++
Sbjct: 304 KAGCEIVVATPGRLIDMLKMKALTMFRATYLVLDEADRMFDLG-----FEPQIRSIVGQI 358
Query: 71 -PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 129
P LFSAT+P VE LAR ++ VRV G A+E + Q ++ KL +
Sbjct: 359 RPDRQTLLFSATMPRRVETLAREVLSAPVRVTAGEVGRANEDVTQVAQIVATDADKLQWM 418
Query: 130 RQSFAESLNPP-VLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ ++ VL+F +K R +EL L + +H D Q
Sbjct: 419 LSKLPQMVDAGDVLVFASTKVRVEELEKHLQDSGFKVAALHGDKDQ 464
>gi|187608185|ref|NP_001119895.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 [Danio rerio]
Length = 709
Score = 79.3 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 56/168 (33%), Positives = 87/168 (51%), Gaps = 5/168 (2%)
Query: 10 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
DL + C +L++TP RL + R KI L +YLVLDEAD++ ++G I +V+ +
Sbjct: 360 DLER-GCHLLVATPGRLVDMMERGKIGLDYCKYLVLDEADRMLDMG-FEPQIRRIVEQDT 417
Query: 70 NP---SIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 126
P S +FSAT P ++ LAR + + + + VGR + SE+I QK+V+ + +
Sbjct: 418 MPPKGSRQTMMFSATFPKEIQILARDFLEEYIFLAVGRVGSTSENITQKVVWVEENDKRS 477
Query: 127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
L A + L+FV++K A L L + IH D SQ
Sbjct: 478 FLLDLLNATGKDSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQ 525
>gi|124481673|gb|AAI33163.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 [Danio rerio]
Length = 709
Score = 79.3 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 56/168 (33%), Positives = 87/168 (51%), Gaps = 5/168 (2%)
Query: 10 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
DL + C +L++TP RL + R KI L +YLVLDEAD++ ++G I +V+ +
Sbjct: 360 DLER-GCHLLVATPGRLVDMMERGKIGLDYCKYLVLDEADRMLDMG-FEPQIRRIVEQDT 417
Query: 70 NP---SIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 126
P S +FSAT P ++ LAR + + + + VGR + SE+I QK+V+ + +
Sbjct: 418 MPPKGSRQTMMFSATFPKEIQILARDFLEEYIFLAVGRVGSTSENITQKVVWVEENDKRS 477
Query: 127 LALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
L A + L+FV++K A L L + IH D SQ
Sbjct: 478 FLLDLLNATGKDSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQ 525
>gi|452980168|gb|EME79929.1| hypothetical protein MYCFIDRAFT_141983 [Pseudocercospora fijiensis
CIRAD86]
Length = 612
Score = 79.3 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L+ ++YLVLDEAD++ ++G I +V+ P
Sbjct: 266 CDLLVATPGRLVDLIERGRISLANIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPPTEG 324
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + + + + VGR + SE+I QK+ + + + LL +
Sbjct: 325 RQTLMFSATFPRDIQLLARDFLREYIFLSVGRVGSTSENITQKVEYVEDIDKRSVLLDIL 384
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L LIFV++K A L L A IH D +Q +
Sbjct: 385 HTHGAGL---TLIFVETKRMADSLSDYLINQGFPATSIHGDRTQRE 427
>gi|423225777|ref|ZP_17212244.1| hypothetical protein HMPREF1062_04430 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392631362|gb|EIY25335.1| hypothetical protein HMPREF1062_04430 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 422
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 87/164 (53%), Gaps = 6/164 (3%)
Query: 14 FSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI 73
D++I+TP RL + +DLSRV Y +LDEAD++ ++G I +VK P
Sbjct: 124 LGADVVIATPGRLLAHLSLGYVDLSRVSYFILDEADRMLDMG-FFDDIMQIVKYL--PKE 180
Query: 74 VRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
++ +FSAT+P +++LA +I+++ V + A + + + + E KL +R
Sbjct: 181 RQTIMFSATMPAKIQQLANTILNNPAEVKLAVSRPADKIV--QAAYVCYENQKLGIIRSL 238
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
FAE V+IF SK + KE+ L + G +HSDL Q Q
Sbjct: 239 FAEQTPERVIIFASSKLKVKEVTKALKMMKLNVGEMHSDLEQAQ 282
>gi|237833961|ref|XP_002366278.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
gi|211963942|gb|EEA99137.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
gi|221486500|gb|EEE24761.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii GT1]
gi|221508269|gb|EEE33856.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii VEG]
Length = 734
Score = 79.3 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 58/183 (31%), Positives = 94/183 (51%), Gaps = 23/183 (12%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHI--------DPVV 65
CDI ++TP RL + R+K+ L V++ VLDEAD++ ++G L +K I P
Sbjct: 368 CDICVATPGRLVDLLERRKVRLGLVQFFVLDEADRMLDMGFLPQIKLIVESFDLPPSPTP 427
Query: 66 KACSNPSI------------VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIK 113
+ PS+ +FSAT P ++ LA+ + D + + VGR + +E I+
Sbjct: 428 QTAGYPSLGGDSGAGRRVGRQTVMFSATFPREIQMLAKDFLEDYIYLAVGRVGSTNEFIR 487
Query: 114 QKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLS 173
Q+L +A E+ KL L + E+ +IFV++K +A + L DD A IH D +
Sbjct: 488 QRLQYA-DEDQKLKLLVKLLRETEKGLTIIFVETKRKADMIEDYLVDDDFPAVSIHGDRT 546
Query: 174 QTQ 176
Q +
Sbjct: 547 QQE 549
>gi|330793454|ref|XP_003284799.1| hypothetical protein DICPUDRAFT_28243 [Dictyostelium purpureum]
gi|325085293|gb|EGC38703.1| hypothetical protein DICPUDRAFT_28243 [Dictyostelium purpureum]
Length = 558
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 89/159 (55%), Gaps = 4/159 (2%)
Query: 18 ILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 77
++++TP RL +++KKI+ + +YL LDEAD+L + G I V+ +N L
Sbjct: 244 MIVATPGRLLELLQKKKINFNLCKYLGLDEADRLIDFG-FEDDIRSVLDHFTNQRQT-LL 301
Query: 78 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESL 137
FSAT+P ++E ARS + V V VGR A+ ++ Q++ F E K++ L + ++
Sbjct: 302 FSATMPKKIQEFARSALVLPVEVNVGRAGAANLNVTQEVEFV-KPEAKIVYLLECLQKT- 359
Query: 138 NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
PPVLIF ++K ++Y L + A IH D SQ +
Sbjct: 360 PPPVLIFCENKKDVDDIYEYLLLKQVEAVSIHGDKSQEE 398
>gi|229828479|ref|ZP_04454548.1| hypothetical protein GCWU000342_00541 [Shuttleworthia satelles DSM
14600]
gi|229793073|gb|EEP29187.1| hypothetical protein GCWU000342_00541 [Shuttleworthia satelles DSM
14600]
Length = 538
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 94/163 (57%), Gaps = 5/163 (3%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
DIL++TP RL + + +DLS VE LVLDEAD++ ++G L + +V+ S PS
Sbjct: 181 GADILVATPGRLLDFMGQDLVDLSSVEILVLDEADRMLDMG-FLPDVSRIVE--STPSKR 237
Query: 75 RSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 133
++L FSAT+ V +LA ++ D V+V V +N A+++++QKL+F+ S E K +
Sbjct: 238 QTLMFSATMEKEVRQLADRMLKDPVQVQVTPENEAADTVEQKLIFS-SREDKREIIASLL 296
Query: 134 AESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ ++F ++K A +L EL I + IH D +Q Q
Sbjct: 297 TDEAVESAIVFTRTKHGADKLSRELKRRGIESVAIHGDKTQGQ 339
>gi|91775307|ref|YP_545063.1| DEAD/DEAH box helicase-like protein [Methylobacillus flagellatus
KT]
gi|91775451|ref|YP_545207.1| DEAD/DEAH box helicase-like protein [Methylobacillus flagellatus
KT]
gi|91709294|gb|ABE49222.1| DEAD/DEAH box helicase-like protein [Methylobacillus flagellatus
KT]
gi|91709438|gb|ABE49366.1| DEAD/DEAH box helicase-like protein [Methylobacillus flagellatus
KT]
gi|167042456|gb|ABZ07182.1| putative DEAD/DEAH box helicase [uncultured marine microorganism
HF4000_ANIW133B20]
Length = 515
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 94/168 (55%), Gaps = 13/168 (7%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
K DIL++TP RL +K IDLS +E LVLDEAD++ ++G ++ I V+ P
Sbjct: 133 KKPLDILVATPGRLLDHAAQKTIDLSAIEILVLDEADRMLDMG-FIRDIKRVLALL--PK 189
Query: 73 IVRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQ--KLVFAGSEEGKLLAL 129
++ LFSAT D ++ELA ++H+ V V R+NTASE ++Q LV G + + L
Sbjct: 190 KRQNLLFSATFSDEIKELADGLLHNPGFVEVARRNTASELVEQAVHLVSQGHKRDLVAHL 249
Query: 130 --RQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQT 175
+ + VLIF ++K A L +L+ D I A IH + SQ+
Sbjct: 250 IRHHDWKQ-----VLIFTRTKHGANRLAEKLSKDGIAAAAIHGNKSQS 292
>gi|346321679|gb|EGX91278.1| DNA/RNA helicase, DEAD/DEAH box type [Cordyceps militaris CM01]
Length = 717
Score = 79.3 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 67/190 (35%), Positives = 91/190 (47%), Gaps = 33/190 (17%)
Query: 17 DILISTP-LRLRLAIRRKKID---LSRVEYLVLDEADKLFEVGNLLKHID-PVVKACSNP 71
DIL++TP L L R L V L+LDEAD L + L + V AC+N
Sbjct: 359 DILVTTPQLLLNFLTARSATTHRVLPDVRDLILDEADVLLD--ELFREATMGVWSACTNA 416
Query: 72 SIVRSLFSATLPDFVEELARSIMHDA-----------VRVIVGRKNTASESIKQKLVFAG 120
+ S +SAT+ +E L + VR++VG K+TA +I KLV+
Sbjct: 417 DLRVSFWSATMGSNIETLITDKLQSRAQRLGVQPKPFVRLVVGLKDTAVPNIVHKLVYTA 476
Query: 121 SEEGKLLALRQSFAES--------LNPPVLIFVQSKDRAKELYGELAFD-------DIRA 165
SE+GKLLALRQ + L PP L+F Q+ DRA L+ EL FD R
Sbjct: 477 SEQGKLLALRQLLHPTSADDSGPPLRPPFLVFTQTIDRAAALHEELKFDIPLEAGGAARI 536
Query: 166 GVIHSDLSQT 175
+HS L ++
Sbjct: 537 AALHSGLPES 546
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.136 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,373,884,127
Number of Sequences: 23463169
Number of extensions: 84254205
Number of successful extensions: 288558
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 12565
Number of HSP's successfully gapped in prelim test: 9921
Number of HSP's that attempted gapping in prelim test: 248864
Number of HSP's gapped (non-prelim): 23094
length of query: 178
length of database: 8,064,228,071
effective HSP length: 133
effective length of query: 45
effective length of database: 9,238,593,890
effective search space: 415736725050
effective search space used: 415736725050
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 71 (32.0 bits)