BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030396
(178 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84TG1|RH57_ARATH DEAD-box ATP-dependent RNA helicase 57 OS=Arabidopsis thaliana
GN=RH57 PE=2 SV=1
Length = 541
Score = 278 bits (711), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 140/172 (81%), Positives = 156/172 (90%), Gaps = 1/172 (0%)
Query: 1 MKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKH 60
M K LV++ D SK CD+LISTP+RL+ AI+ KKIDLS+VEYLVLDE+DKLFE +LLK
Sbjct: 244 MTKPLVKTADFSKLWCDVLISTPMRLKRAIKAKKIDLSKVEYLVLDESDKLFE-QSLLKQ 302
Query: 61 IDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAG 120
ID VVKACSNPSI+RSLFSATLPD VEELARSIMHDAVRVI+GRKNTASE++KQKLVFAG
Sbjct: 303 IDCVVKACSNPSIIRSLFSATLPDSVEELARSIMHDAVRVIIGRKNTASETVKQKLVFAG 362
Query: 121 SEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDL 172
SEEGKLLALRQSFAESLNPPVLIFVQSK+RAKELY EL ++IRAGVIHSDL
Sbjct: 363 SEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYDELKCENIRAGVIHSDL 414
>sp|Q5K5B6|RH57_ORYSJ DEAD-box ATP-dependent RNA helicase 57 OS=Oryza sativa subsp.
japonica GN=Os07g0647900 PE=2 SV=2
Length = 540
Score = 261 bits (666), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 130/176 (73%), Positives = 153/176 (86%), Gaps = 1/176 (0%)
Query: 1 MKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKH 60
M K+L +S + CDILISTPLRL A++++ +DLSRVEYLVLDE+DKLFE+G ++
Sbjct: 249 MTKDLSKSGNFKDMHCDILISTPLRLDHAVQKRDLDLSRVEYLVLDESDKLFELG-FVEV 307
Query: 61 IDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAG 120
ID VVKACSNPSI+RSLFSATLPD +E LAR+IMHDAVRVIVGRKN+AS IKQKL+FAG
Sbjct: 308 IDSVVKACSNPSIIRSLFSATLPDSIETLARTIMHDAVRVIVGRKNSASSLIKQKLIFAG 367
Query: 121 SEEGKLLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+E+GKLLALRQSFAESLNPPVLIFVQSK+RAKELY ELAFDD+RA VIH+DL + Q
Sbjct: 368 TEKGKLLALRQSFAESLNPPVLIFVQSKERAKELYKELAFDDVRADVIHADLDEEQ 423
>sp|A3GHW9|ROK1_PICST ATP-dependent RNA helicase ROK1 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=ROK1 PE=3 SV=1
Length = 558
Score = 166 bits (420), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 115/161 (71%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DI++STPLRL ++ +K+DLS+VE LV+DEADKLF+ G ++ D ++ C+ I +S
Sbjct: 247 DIIVSTPLRLIDIVKNEKVDLSKVEQLVIDEADKLFDQG-FVEQTDDILSHCTYTKIRKS 305
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSAT+P VEE+A SIM D +RVI+GRK AS +I QKLVF GSEEGKLLA+RQ E
Sbjct: 306 MFSATIPSGVEEMAHSIMRDPIRVIIGRKEAASNTIDQKLVFTGSEEGKLLAIRQMIQEG 365
Query: 137 -LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
PP++IF+QS RAK L+ EL +D + VIH++ + Q
Sbjct: 366 EFKPPIIIFLQSIHRAKALFHELLYDKLNVDVIHAERTPKQ 406
>sp|Q75AE1|ROK1_ASHGO ATP-dependent RNA helicase ROK1 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ROK1
PE=3 SV=1
Length = 569
Score = 165 bits (418), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/161 (52%), Positives = 118/161 (73%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DI+ISTPLRL ++ + +DLS V+YL+ DEADKLF+ ++ D ++ ACS+P+I +
Sbjct: 253 DIIISTPLRLIDIVKSESLDLSAVKYLIFDEADKLFD-KTFVEQTDDILSACSHPNISKV 311
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
LFSATLP VEELA+SIM D VRVI+G K A+ +I+QKLVF G+EEGKL+A+RQ E
Sbjct: 312 LFSATLPSSVEELAQSIMTDPVRVIIGHKEAANTNIEQKLVFCGNEEGKLVAIRQLIQEG 371
Query: 137 L-NPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ PPV+IF++S RAK L+ EL +D + VIH++ +Q Q
Sbjct: 372 MFRPPVIIFLESITRAKALFHELLYDKLNVDVIHAERTQVQ 412
>sp|Q6BP45|ROK1_DEBHA ATP-dependent RNA helicase ROK1 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=ROK1 PE=3 SV=2
Length = 550
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 115/161 (71%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DIL+STPLRL +I+ + I LS+VE LV+DE DKLF+ G ++ D ++ C+N + +S
Sbjct: 240 DILVSTPLRLIDSIKNETISLSKVEQLVIDETDKLFDQG-FVEQTDEILSNCTNTKLRKS 298
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSAT+P VEE+A+SIM D +RVI+G K AS +I+QKLVF G+EEGKLLA+RQ +
Sbjct: 299 MFSATIPSGVEEMAQSIMKDPIRVIIGHKEAASNTIEQKLVFTGNEEGKLLAIRQMIQQG 358
Query: 137 -LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
PP++IF+QS RAK L+ EL +D + VIH++ + Q
Sbjct: 359 EFKPPIIIFLQSITRAKALFHELLYDRLNVDVIHAERTPKQ 399
>sp|Q86IZ9|DDX52_DICDI Probable ATP-dependent RNA helicase ddx52 OS=Dictyostelium
discoideum GN=ddx52 PE=3 SV=1
Length = 668
Score = 162 bits (409), Expect = 2e-39, Method: Composition-based stats.
Identities = 83/160 (51%), Positives = 112/160 (70%), Gaps = 1/160 (0%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DILI+TPLRL I+ + L++VEYLV DEADKLF+ N + +D VV AC NP +
Sbjct: 320 DILITTPLRLVYLIKENLLSLNKVEYLVFDEADKLFD-KNFQEQVDIVVTACQNPKLKIC 378
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
LFSAT+ VEEL SIM + +++I+G +N A+ ++ QKL++ G EEGKLLA+RQ +
Sbjct: 379 LFSATMNQQVEELGHSIMKNPIKIIIGEQNAAAITVDQKLIYVGKEEGKLLAVRQLIQKG 438
Query: 137 LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L PP+LIF QSK+RA +L+ EL FD I VIHS+ +Q Q
Sbjct: 439 LEPPILIFTQSKERAHDLFQELIFDGINVDVIHSERTQFQ 478
>sp|A7TT88|ROK1_VANPO ATP-dependent RNA helicase ROK1 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=ROK1 PE=3 SV=1
Length = 570
Score = 161 bits (408), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 123/172 (71%), Gaps = 2/172 (1%)
Query: 6 VRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVV 65
+R+ +S DI++STPLRL ++ + +DLS+V++L+ DEADKLF+ ++ D ++
Sbjct: 249 LRNKVISDKKYDIIVSTPLRLIDVVKNEALDLSQVKHLIFDEADKLFD-KTFVEQSDDIL 307
Query: 66 KACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK 125
+CS+ S+ +S+FSAT+P VEE+A+SIM D VRVI+G K A+ SI+QKLVF G+EEGK
Sbjct: 308 SSCSHSSLRKSMFSATIPSNVEEIAKSIMMDPVRVIIGHKEAANTSIEQKLVFCGNEEGK 367
Query: 126 LLALRQSFAES-LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L+A++Q E PPV+IF++S RAK LY E+ +D + VIH++ +Q Q
Sbjct: 368 LIAIKQLVQEGEFKPPVIIFLESITRAKALYHEMMYDSLNVDVIHAERTQVQ 419
>sp|A5E1N2|ROK1_LODEL ATP-dependent RNA helicase ROK1 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=ROK1 PE=3 SV=1
Length = 553
Score = 161 bits (407), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 86/171 (50%), Positives = 117/171 (68%), Gaps = 3/171 (1%)
Query: 8 STDLSKFS-CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVK 66
S D+ K S DIL+STPLRL ++ K+DLS+V LV+DEADKLF+ G + D ++
Sbjct: 235 SNDVVKASKYDILVSTPLRLIDVVKLGKVDLSKVTQLVIDEADKLFDHG-FAEQTDELLS 293
Query: 67 ACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 126
C+N I +S+FSAT+P VEE+A SIM D +RVI+G K AS +I+QKLVF G+EEGKL
Sbjct: 294 HCTNVKIRKSMFSATIPSGVEEMAHSIMKDPIRVIIGHKEAASNTIEQKLVFTGNEEGKL 353
Query: 127 LALRQSFAES-LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
LA+RQ PP++IF+QS RAK L+ EL +D + VIH++ + Q
Sbjct: 354 LAIRQMIQNGEFKPPIIIFLQSITRAKALFHELVYDKLNVDVIHAERTPKQ 404
>sp|A5DIX5|ROK1_PICGU ATP-dependent RNA helicase ROK1 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=ROK1 PE=3 SV=2
Length = 537
Score = 160 bits (405), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 115/161 (71%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
D+LI TPLRL ++++++DLS+VE+LV+DEADKLF+ G ++ D ++ C+ P+ S
Sbjct: 231 DVLICTPLRLIDLVKKEQVDLSKVEHLVIDEADKLFDHG-FVEQTDEILSHCTLPTRRTS 289
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSAT+P VEE+A SIM D +R+IVG K AS SI QKLVF G+EEGKLLA+RQ +
Sbjct: 290 MFSATIPSGVEEMANSIMKDQIRIIVGHKEGASTSIDQKLVFTGNEEGKLLAIRQMVQQG 349
Query: 137 -LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
PP++IF+QS RAK L+ EL +D + VIH++ + Q
Sbjct: 350 EFKPPIIIFLQSIPRAKALFHELIYDKLNVEVIHAERTPKQ 390
>sp|Q6FN65|ROK1_CANGA ATP-dependent RNA helicase ROK1 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=ROK1 PE=3 SV=1
Length = 565
Score = 159 bits (402), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 79/172 (45%), Positives = 121/172 (70%), Gaps = 2/172 (1%)
Query: 6 VRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVV 65
+R+ +S D++ISTPLRL ++ + +DLS V++L+ DEADKLF+ ++ D ++
Sbjct: 242 LRNKVISDKKYDLIISTPLRLIDVVKNEALDLSNVKHLIFDEADKLFD-KTFIEQTDDIL 300
Query: 66 KACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK 125
+C++PS+ +S+FSAT+P VEE A SIM+D VRVI+G K A+ +I+QKL+F G+EEGK
Sbjct: 301 NSCTDPSMRKSMFSATIPSSVEETANSIMNDPVRVIIGHKEAANTNIEQKLIFCGNEEGK 360
Query: 126 LLALRQSFAES-LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L+A+RQ + PP++IF++S RAK LY EL +D I VIH++ + Q
Sbjct: 361 LIAIRQLVQQGEFKPPIIIFLESIARAKALYHELMYDRINVDVIHAERTAIQ 412
>sp|P45818|ROK1_YEAST ATP-dependent RNA helicase ROK1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=ROK1 PE=1 SV=1
Length = 564
Score = 159 bits (401), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 116/161 (72%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DI+ISTPLRL ++ + +DLS+V++L+ DEADKLF+ ++ D ++ AC PS+ ++
Sbjct: 251 DIIISTPLRLIDVVKNEALDLSKVKHLIFDEADKLFD-KTFVEQSDDILSACREPSLRKA 309
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSAT+P VEE+A+SIM D VRVI+G K A+ +I+QKL+F G+EEGKL+A+RQ E
Sbjct: 310 MFSATIPSNVEEIAQSIMMDPVRVIIGHKEAANTNIEQKLIFCGNEEGKLIAIRQLVQEG 369
Query: 137 -LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
PP++IF++S RAK LY EL +D I VIH++ + Q
Sbjct: 370 EFKPPIIIFLESITRAKALYHELMYDRINVDVIHAERTALQ 410
>sp|A6ZU15|ROK1_YEAS7 ATP-dependent RNA helicase ROK1 OS=Saccharomyces cerevisiae (strain
YJM789) GN=ROK1 PE=3 SV=1
Length = 564
Score = 159 bits (401), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 116/161 (72%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DI+ISTPLRL ++ + +DLS+V++L+ DEADKLF+ ++ D ++ AC PS+ ++
Sbjct: 251 DIIISTPLRLIDVVKNEALDLSKVKHLIFDEADKLFD-KTFVEQSDDILSACREPSLRKA 309
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSAT+P VEE+A+SIM D VRVI+G K A+ +I+QKL+F G+EEGKL+A+RQ E
Sbjct: 310 MFSATIPSNVEEIAQSIMMDPVRVIIGHKEAANTNIEQKLIFCGNEEGKLIAIRQLVQEG 369
Query: 137 -LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
PP++IF++S RAK LY EL +D I VIH++ + Q
Sbjct: 370 EFKPPIIIFLESITRAKALYHELMYDRINVDVIHAERTALQ 410
>sp|Q9Y7C4|ROK1_CANAL ATP-dependent RNA helicase CHR1 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=CHR1 PE=3 SV=1
Length = 578
Score = 157 bits (396), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 77/161 (47%), Positives = 113/161 (70%), Gaps = 2/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
DI++STPLRL +++ +DLS++E L++DEADKLF+ G + D ++ C+N I +S
Sbjct: 257 DIIVSTPLRLIDVVKQGNMDLSKIEQLIIDEADKLFDHG-FAEQTDEILTHCTNLKIRKS 315
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
+FSAT+P VEE+A SIM D +R+I+G K AS +I QKLVF G+E+GKLLA+RQ +
Sbjct: 316 IFSATIPSSVEEMAHSIMKDPLRIIIGHKEAASNTIDQKLVFTGNEQGKLLAIRQMIQQG 375
Query: 137 -LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
PP++IF+QS RAK L+ EL +D + VIH++ + Q
Sbjct: 376 EFKPPIIIFLQSITRAKALFHELLYDRLNVDVIHAERTPKQ 416
>sp|Q6CSW1|ROK1_KLULA ATP-dependent RNA helicase ROK1 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=ROK1 PE=3 SV=1
Length = 579
Score = 154 bits (388), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 74/167 (44%), Positives = 120/167 (71%), Gaps = 2/167 (1%)
Query: 11 LSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN 70
+S+ DI+ISTPLRL ++ + ++L +V++L+ DEADKLF+ ++ D ++ +C++
Sbjct: 256 ISEDKYDIIISTPLRLITVVQEEALNLGKVKHLIFDEADKLFD-KTFVEQTDDILSSCTD 314
Query: 71 PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 130
P + +++FSAT+P VEE+A++IM+D +RVI+G K A+ +I Q+LVF G+EEGKL+A+R
Sbjct: 315 PHLRKTMFSATIPSNVEEIAQTIMNDPIRVIIGHKEAANINIDQQLVFCGNEEGKLIAIR 374
Query: 131 QSFAES-LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
Q E PPV+IF++S RAK L+ EL +D + VIH++ +Q Q
Sbjct: 375 QLVLEGEFKPPVIIFLESITRAKALFHELLYDKLNVDVIHAERTQVQ 421
>sp|Q09775|ROK1_SCHPO ATP-dependent RNA helicase rok1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rok1 PE=3 SV=1
Length = 481
Score = 146 bits (368), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 76/161 (47%), Positives = 111/161 (68%), Gaps = 3/161 (1%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 76
D+ I TP+RL AI+ + +VE+ V+DEAD+LFE G ++ D ++ AC++ +I +S
Sbjct: 168 DMCIGTPMRLVQAIQ-TGLSFEKVEFFVMDEADRLFEPG-FIEQTDHILSACTSSNICKS 225
Query: 77 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 136
LFSAT+P VEELA+ + D +R+IVG K+ A++SI Q+L+F GS+ K++ LRQ +
Sbjct: 226 LFSATIPSRVEELAKVVTVDPIRIIVGLKDAATDSIDQRLLFVGSDTSKIVILRQMISNG 285
Query: 137 -LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L P V+IFVQ +RAK LY EL FD+I GVIH +L Q +
Sbjct: 286 ELKPRVVIFVQDIERAKALYTELLFDEIHVGVIHGELPQAK 326
>sp|Q6CDS6|ROK1_YARLI ATP-dependent RNA helicase ROK1 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=ROK1 PE=3 SV=1
Length = 547
Score = 145 bits (367), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/170 (47%), Positives = 115/170 (67%), Gaps = 4/170 (2%)
Query: 6 VRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVV 65
+R+ +S DI I+TPLRL A+ +DL ++ ++ DEADKLFE G +D ++
Sbjct: 232 LRNGKVSSQKYDICITTPLRLVSALNDGSLDLGSLDLVIFDEADKLFEKG-FATQVDDIL 290
Query: 66 KACSNPSIVRSLFSATLPDFVEELARSIMH-DAVRVIVGRKNTASESIKQKLVFAGSEEG 124
AC + I ++LFSAT+P VE+LA SIM D +R+I+G K A+++++QKLV+AG+EEG
Sbjct: 291 AACPS-GIQKTLFSATIPASVEQLANSIMSTDPLRIIIGNKQAAAQTVEQKLVYAGNEEG 349
Query: 125 KLLALRQSFAES-LNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLS 173
KL+A+RQ E L PV+IF+QS DRAK L+ EL FD I IH D++
Sbjct: 350 KLVAIRQMAREGQLVAPVIIFLQSIDRAKALFKELVFDGINVDQIHGDMT 399
>sp|Q99PT0|DDX52_RAT Probable ATP-dependent RNA helicase DDX52 OS=Rattus norvegicus
GN=Ddx52 PE=2 SV=1
Length = 598
Score = 139 bits (351), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 112/164 (68%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRRK--KIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL ++++ IDL+ VE+LV+DE+DKLFE G + + AC++P
Sbjct: 288 DILVTTPNRLIYLLKQEPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSPK 347
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + V V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 348 VRRAMFSATFAYDVEQWCKLNLDNIVSVSIGARNSAVETVEQELLFVGSETGKLLAMREL 407
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ NPPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 408 VKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 451
>sp|Q8K301|DDX52_MOUSE Probable ATP-dependent RNA helicase DDX52 OS=Mus musculus GN=Ddx52
PE=2 SV=2
Length = 598
Score = 137 bits (346), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 111/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+LV+DE+DKLFE G + + + AC++P
Sbjct: 288 DILVTTPNRLIYLLKQDPPGIDLTNVEWLVVDESDKLFEDGKTGFREQLASIFLACTSPK 347
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + V V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 348 VRRAMFSATFAYDVEQWCKLNLDNVVSVSIGARNSAVETVEQELLFVGSETGKLLAMREL 407
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ PPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 408 VKKGFKPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 451
>sp|A5D7C1|DDX52_BOVIN Probable ATP-dependent RNA helicase DDX52 OS=Bos taurus GN=DDX52
PE=2 SV=1
Length = 596
Score = 137 bits (346), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 109/164 (66%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+LV+DE+DKLFE G + + AC++
Sbjct: 285 DILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHK 344
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ R + + V VG +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 345 VKRAMFSATFAYDVEQWCRLNLDSVITVSVGARNSAVETVEQELLFVGSETGKLLAMREL 404
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ NPPVL+FVQS +RAKEL+ EL ++ I VIH+D +Q Q
Sbjct: 405 VKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHADRTQQQ 448
>sp|Q9Y2R4|DDX52_HUMAN Probable ATP-dependent RNA helicase DDX52 OS=Homo sapiens GN=DDX52
PE=1 SV=3
Length = 599
Score = 134 bits (338), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 110/164 (67%), Gaps = 4/164 (2%)
Query: 17 DILISTPLRLRLAIRR--KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 72
DIL++TP RL +++ IDL+ VE+LV+DE+DKLFE G + + AC++
Sbjct: 287 DILVTTPNRLIYLLKQDPPGIDLASVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHK 346
Query: 73 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+ R++FSAT VE+ + + + + V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 347 VRRAMFSATFAYDVEQWCKLNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAMREL 406
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ NPPVL+FVQS +RAKEL+ EL ++ I VIH++ +Q Q
Sbjct: 407 VKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQ 450
>sp|P0CR05|ROK1_CRYNB ATP-dependent RNA helicase ROK1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=ROK1 PE=3 SV=1
Length = 620
Score = 122 bits (307), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 103/171 (60%), Gaps = 3/171 (1%)
Query: 8 STDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKA 67
S + D+L++TP RL I ++I L+R +Y++LDE+D+L + L ++P++ A
Sbjct: 291 SGNPEGLGIDVLVATPERLHHLIDSRRISLARTKYVILDESDRLLS-SDFLPQVEPILSA 349
Query: 68 CSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGR-KNTASESIKQKLVFAGSEEGKL 126
CSNP++ + SAT+P E LA+ + D +V K++A ++ Q L++ GSE GKL
Sbjct: 350 CSNPAVQKCFLSATMPAGAESLAKKWLKDGGVRVVVGVKDSAVTTVDQSLLYTGSESGKL 409
Query: 127 LALRQSFAESLNP-PVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
LALR + P P LIFVQS DRA+ELY L D I+ +H ++T+
Sbjct: 410 LALRNLISSGQLPYPSLIFVQSIDRAEELYKTLVLDGIKVDAVHGGKAKTK 460
>sp|P0CR04|ROK1_CRYNJ ATP-dependent RNA helicase ROK1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=ROK1 PE=3 SV=1
Length = 620
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 103/171 (60%), Gaps = 3/171 (1%)
Query: 8 STDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKA 67
S + D+L++TP RL I ++I L+R +Y++LDE+D+L + L ++P++ A
Sbjct: 291 SGNPEGLGIDMLVATPERLHHLIDSRRISLARTKYVILDESDRLLS-SDFLPQVEPILSA 349
Query: 68 CSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGR-KNTASESIKQKLVFAGSEEGKL 126
CSNP++ + SAT+P E LA+ + D +V K++A ++ Q L++ GSE GKL
Sbjct: 350 CSNPAVQKCFLSATMPAGAESLAKKWLKDGGVRVVVGVKDSAVTTVDQSLLYTGSESGKL 409
Query: 127 LALRQSFAESLNP-PVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
LALR + P P LIFVQS DRA+ELY L D I+ +H ++T+
Sbjct: 410 LALRNLISSGQLPYPSLIFVQSIDRAEELYKTLVLDGIKVDAVHGGKAKTK 460
>sp|A7TKR8|DED1_VANPO ATP-dependent RNA helicase DED1 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=DED1 PE=3 SV=1
Length = 650
Score = 105 bits (261), Expect = 2e-22, Method: Composition-based stats.
Identities = 63/172 (36%), Positives = 99/172 (57%), Gaps = 10/172 (5%)
Query: 10 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 69
DLS+ CD+L++TP RL + R ++ L+ V+YLVLDEAD++ ++G I +V C
Sbjct: 289 DLSR-GCDLLVATPGRLSDLLERGRVSLANVKYLVLDEADRMLDMG-FEPQIRQIVDGCD 346
Query: 70 NPSIVRS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK- 125
P + +FSAT PD ++ LAR + D + + VG+ + SE+I Q++++ + K
Sbjct: 347 MPPVGERQTLMFSATFPDDIQHLARDFLSDYIFLSVGKVGSTSENITQRILYVEDMDKKS 406
Query: 126 -LLALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
LL L + + L LIFV++K A EL L D RA IH D +Q++
Sbjct: 407 TLLDLLSASNDGL---TLIFVETKRMADELTDFLIMQDFRATAIHGDRTQSE 455
>sp|Q8TFK8|DED1_CANGA ATP-dependent RNA helicase DED1 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DED1 PE=3 SV=1
Length = 617
Score = 102 bits (253), Expect = 2e-21, Method: Composition-based stats.
Identities = 61/164 (37%), Positives = 93/164 (56%), Gaps = 5/164 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL + R K+ LS V+YLVLDEAD++ ++G I +V+ C P
Sbjct: 279 CDLLVATPGRLNDLLERGKVSLSNVKYLVLDEADRMLDMG-FEPQIRHIVEDCDMPPTGE 337
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR +HD + + VGR + SE+I Q++++ + + K AL
Sbjct: 338 RQTLMFSATFPHDIQHLARDFLHDYIFLSVGRVGSTSENITQRILYVENRD-KNSALLDL 396
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
A S + LIFV++K A +L L + A IH D SQ +
Sbjct: 397 LAASNDNLTLIFVETKRMADQLTDFLIMQNFSATAIHGDRSQAE 440
>sp|Q5BET6|ROK1_EMENI ATP-dependent RNA helicase rok1 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=rok1
PE=3 SV=1
Length = 742
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 106/192 (55%), Gaps = 32/192 (16%)
Query: 16 CDILISTPLRLRLAIRRKKID----LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP 71
DIL+STPL+L A+ K L V LVLDEAD L + + +D + ++C++P
Sbjct: 359 SDILVSTPLQLVNALSDNKTKPLATLPLVRNLVLDEADVLLDPLFRDQTLD-IWRSCTHP 417
Query: 72 SIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASESIKQKLVFA 119
+ SL+SAT+ +E++A++ + + +R++VG K++A +IK KLV+A
Sbjct: 418 ELRASLWSATMGSSIEDMAKTTIKERKLSLPQTKSYPLLRLVVGLKDSAIPNIKHKLVYA 477
Query: 120 GSEEGKLLALRQSFAES--------LNPPVLIFVQSKDRAKELYGELAFD-------DIR 164
+E+GKLL LRQ + L PP LIF Q+ RA L+ EL +D R
Sbjct: 478 ATEQGKLLGLRQLIHPTAATTSDVRLRPPFLIFTQTIPRAIALHSELLYDIPPEAGGSAR 537
Query: 165 AGVIHSDLSQTQ 176
V+HSDLS TQ
Sbjct: 538 IAVLHSDLSDTQ 549
>sp|A6ZP47|DED1_YEAS7 ATP-dependent RNA helicase DED1 OS=Saccharomyces cerevisiae (strain
YJM789) GN=DED1 PE=3 SV=1
Length = 604
Score = 98.6 bits (244), Expect = 2e-20, Method: Composition-based stats.
Identities = 61/164 (37%), Positives = 96/164 (58%), Gaps = 5/164 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS-NPSIV 74
CD+L++TP RL + R KI L+ V+YLVLDEAD++ ++G I +V+ C P
Sbjct: 276 CDLLVATPGRLNDLLERGKISLANVKYLVLDEADRMLDMG-FEPQIRHIVEDCDMTPVGE 334
Query: 75 RS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
R +FSAT P ++ LAR + D + + VGR + SE+I QK+++ +++ K AL
Sbjct: 335 RQTLMFSATFPADIQHLARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKK-SALLDL 393
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ S + LIFV++K A +L L + RA IH D +Q++
Sbjct: 394 LSASTDGLTLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSE 437
>sp|P06634|DED1_YEAST ATP-dependent RNA helicase DED1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=DED1 PE=1 SV=2
Length = 604
Score = 98.6 bits (244), Expect = 2e-20, Method: Composition-based stats.
Identities = 61/164 (37%), Positives = 96/164 (58%), Gaps = 5/164 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS-NPSIV 74
CD+L++TP RL + R KI L+ V+YLVLDEAD++ ++G I +V+ C P
Sbjct: 276 CDLLVATPGRLNDLLERGKISLANVKYLVLDEADRMLDMG-FEPQIRHIVEDCDMTPVGE 334
Query: 75 RS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
R +FSAT P ++ LAR + D + + VGR + SE+I QK+++ +++ K AL
Sbjct: 335 RQTLMFSATFPADIQHLARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKK-SALLDL 393
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ S + LIFV++K A +L L + RA IH D +Q++
Sbjct: 394 LSASTDGLTLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSE 437
>sp|Q6FP38|DBP1_CANGA ATP-dependent RNA helicase DBP1 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DBP1 PE=3 SV=1
Length = 604
Score = 98.6 bits (244), Expect = 2e-20, Method: Composition-based stats.
Identities = 58/164 (35%), Positives = 93/164 (56%), Gaps = 5/164 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
C++L++TP RL + R KI L V+YLVLDEAD++ ++G I +V+ C PS+
Sbjct: 272 CNLLVATPGRLNDLLERGKISLVNVKYLVLDEADRMLDMG-FEPQIRHIVEDCDMPSVND 330
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + D + + VGR + SE+I+QK++F + K AL
Sbjct: 331 RQTLMFSATFPREIQHLARDFLKDYIFLSVGRVGSTSENIQQKVLFV-EDYDKNSALLDI 389
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
++ L+FV++K A +L L + +A IH D +Q +
Sbjct: 390 LINEIDGLTLVFVETKRMADQLTDFLIVQNFKATAIHGDRTQAE 433
>sp|Q2UQW3|ROK1_ASPOR ATP-dependent RNA helicase rok1 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=rok1 PE=3 SV=1
Length = 725
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 106/192 (55%), Gaps = 32/192 (16%)
Query: 16 CDILISTPLRLRLAIRRKKID----LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP 71
DIL++TPL+L A+ K L V +VLDEAD L + + +D + +AC++P
Sbjct: 347 SDILVTTPLQLVNALSANKTKPMATLPLVRNIVLDEADVLLDPLFREQTLD-IWRACTHP 405
Query: 72 SIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASESIKQKLVFA 119
+ SL+SAT+ +E+LA+S + + R++VG K++A +I+ KLV+A
Sbjct: 406 ELRASLWSATMGSSIEDLAKSTIKERKDASSLTKSYPLYRLVVGLKDSAIPNIQHKLVYA 465
Query: 120 GSEEGKLLALRQ-----SFAES---LNPPVLIFVQSKDRAKELYGELAFD-------DIR 164
+E+GKLL LRQ + A S L PP LIF Q+ RA L+ EL +D R
Sbjct: 466 ATEQGKLLGLRQLLHPAAAAASDIRLRPPFLIFTQTIPRAVALHSELRYDIPPEAGGSSR 525
Query: 165 AGVIHSDLSQTQ 176
V+HSDLS Q
Sbjct: 526 IAVLHSDLSDGQ 537
>sp|A6ZWD3|DBP1_YEAS7 ATP-dependent RNA helicase DBP1 OS=Saccharomyces cerevisiae (strain
YJM789) GN=DBP1 PE=3 SV=1
Length = 617
Score = 96.3 bits (238), Expect = 8e-20, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 95/166 (57%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL + R K+ L+ ++YLVLDEAD++ ++G I +V+ C PS+
Sbjct: 288 CDLLVATPGRLNDLLERGKVSLANIKYLVLDEADRMLDMG-FEPQIRHIVEECDMPSVEN 346
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + + + + VGR + SE+I Q++++ + K LL L
Sbjct: 347 RQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVGSTSENITQRILYVDDMDKKSALLDLL 406
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + L LIFV++K A +L L + +A IH D +Q +
Sbjct: 407 SAEHKGL---TLIFVETKRMADQLTDFLIMQNFKATAIHGDRTQAE 449
>sp|P24784|DBP1_YEAST ATP-dependent RNA helicase DBP1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=DBP1 PE=1 SV=2
Length = 617
Score = 95.9 bits (237), Expect = 1e-19, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 95/166 (57%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL + R K+ L+ ++YLVLDEAD++ ++G I +V+ C PS+
Sbjct: 288 CDLLVATPGRLNDLLERGKVSLANIKYLVLDEADRMLDMG-FEPQIRHIVEECDMPSVEN 346
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + + + + VGR + SE+I Q++++ + K LL L
Sbjct: 347 RQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVGSTSENITQRILYVDDMDKKSALLDLL 406
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + L LIFV++K A +L L + +A IH D +Q +
Sbjct: 407 SAEHKGL---TLIFVETKRMADQLTDFLIMQNFKATAIHGDRTQAE 449
>sp|A1CNK1|ROK1_ASPCL ATP-dependent RNA helicase rok1 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=rok1 PE=3 SV=1
Length = 738
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 104/200 (52%), Gaps = 48/200 (24%)
Query: 16 CDILISTPLRLRLAIRRKKID----LSRVEYLVLDEADKLFEVGNLLKHIDP-------- 63
DIL++TPL+L A+ + L V +VLDEAD L +DP
Sbjct: 360 SDILVTTPLQLVNALSTNQTKPMATLPLVRNIVLDEADVL---------LDPLFRDQTLN 410
Query: 64 VVKACSNPSIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASES 111
+ +AC++P + SL+SAT+ VE+LA+S + + +R++VG K++A +
Sbjct: 411 IWRACTHPELRASLWSATMGSNVEDLAKSTIKERKEAVNQTKSYPLLRLVVGLKDSAIPN 470
Query: 112 IKQKLVFAGSEEGKLLALRQSFAES--------LNPPVLIFVQSKDRAKELYGELAFD-- 161
I+ KL++A +E+GKLL LRQ + L PP LIF Q+ RA L+ EL +D
Sbjct: 471 IEHKLIYAATEQGKLLGLRQLLHPTAASASDVRLRPPFLIFTQTIPRAVALHSELRYDIP 530
Query: 162 -----DIRAGVIHSDLSQTQ 176
R V+HSDLS Q
Sbjct: 531 TEAGGSSRIAVLHSDLSDGQ 550
>sp|Q4WRH5|ROK1_ASPFU ATP-dependent RNA helicase rok1 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=rok1
PE=3 SV=1
Length = 739
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 105/192 (54%), Gaps = 32/192 (16%)
Query: 16 CDILISTPLRL--RLAIRRKK--IDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP 71
DIL++TPL L L+ R K L V +VLDEAD L + + +D + +AC++P
Sbjct: 362 SDILVTTPLLLVNALSANRTKPMATLPLVRNIVLDEADVLLDELFREQTLD-IWRACTHP 420
Query: 72 SIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASESIKQKLVFA 119
+ SL+SAT+ +E+LA+S + + +R++VG K++A +I+ KLV+A
Sbjct: 421 ELRASLWSATMGSNIEDLAKSTIKERKQAYDQTKSYPLLRLVVGLKDSAIPNIEHKLVYA 480
Query: 120 GSEEGKLLALRQSFAES--------LNPPVLIFVQSKDRAKELYGELAFD-------DIR 164
+E+GKLL LRQ + L PP LIF Q+ RA L+ EL +D R
Sbjct: 481 ATEQGKLLGLRQLLHPAAASVSDVRLRPPFLIFTQTIPRAIALHSELRYDIPAEAGGSSR 540
Query: 165 AGVIHSDLSQTQ 176
V+HSDLS Q
Sbjct: 541 IAVLHSDLSDGQ 552
>sp|Q1E306|ROK1_COCIM ATP-dependent RNA helicase ROK1 OS=Coccidioides immitis (strain RS)
GN=ROK1 PE=3 SV=1
Length = 730
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 107/212 (50%), Gaps = 48/212 (22%)
Query: 4 ELVRSTDLSKFSCDILISTPLRLRLAI----RRKKIDLSRVEYLVLDEADKLFEVGNLLK 59
E +S D+ DIL+ TPL L A+ +R L V+ LVLDEAD L
Sbjct: 343 EGEKSKDIPLTKSDILVCTPLVLANALSDGGKRDVAPLPSVQKLVLDEADVL-------- 394
Query: 60 HIDP--------VVKACSNPSIVRSLFSATLPDFVEELARSIMHDA------------VR 99
+DP + +AC++P + L+SAT+ +EEL +S + + +R
Sbjct: 395 -LDPLFREQTLSIWRACTHPQLRVGLWSATMGSNIEELTKSTIKERQELLGLKDESSLIR 453
Query: 100 VIVGRKNTASESIKQKLVFAGSEEGKLLALRQ--------SFAESLNPPVLIFVQSKDRA 151
++VG K+TA +I KLV+A +E+GKLL LRQ S L PP LIF Q+ RA
Sbjct: 454 LVVGLKDTAIPNISHKLVYAATEQGKLLGLRQLLHPTSTSSSTTHLRPPFLIFTQTIARA 513
Query: 152 KELYGELAFD-------DIRAGVIHSDLSQTQ 176
L+ EL +D R V+HS+LS ++
Sbjct: 514 IALHSELMYDIPAEAGGSSRIAVLHSELSDSK 545
>sp|A1D1E3|ROK1_NEOFI ATP-dependent RNA helicase rok1 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=rok1
PE=3 SV=1
Length = 738
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 105/192 (54%), Gaps = 32/192 (16%)
Query: 16 CDILISTPLRL--RLAIRRKK--IDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP 71
DIL++TPL L L+ R K L V +VLDEAD L + + +D + +AC++P
Sbjct: 361 SDILVTTPLLLVNALSANRTKPMATLPLVRNIVLDEADVLLDELFRDQTLD-IWRACTHP 419
Query: 72 SIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASESIKQKLVFA 119
+ SL+SAT+ +E+LA+S + + +R++VG K++A +I+ KLV+A
Sbjct: 420 ELRASLWSATMGSNIEDLAKSTIKERKQAYDRTNSYPLLRLVVGLKDSAIPNIEHKLVYA 479
Query: 120 GSEEGKLLALRQSFAES--------LNPPVLIFVQSKDRAKELYGELAFD-------DIR 164
+E+GKLL LRQ + L PP LIF Q+ RA L+ EL +D R
Sbjct: 480 ATEQGKLLGLRQLLHPAAASASDVRLRPPFLIFTQTIPRAIALHSELRYDIPAEAGGSSR 539
Query: 165 AGVIHSDLSQTQ 176
V+HSDLS Q
Sbjct: 540 IAVLHSDLSDGQ 551
>sp|Q0CMB0|ROK1_ASPTN ATP-dependent RNA helicase rok1 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=rok1 PE=3 SV=2
Length = 749
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 106/192 (55%), Gaps = 32/192 (16%)
Query: 16 CDILISTPLRL--RLAIRRKK--IDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP 71
DIL++TPL L L+ R K L V +VLDEAD L + + +D + ++C++P
Sbjct: 370 SDILVTTPLLLVNALSANRTKPLAALPLVRNIVLDEADVLLDPLFREQTLD-IWRSCTHP 428
Query: 72 SIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASESIKQKLVFA 119
+ SL+SAT+ VE+LA+S + + +R++VG K++A +I+ KLV+A
Sbjct: 429 ELRASLWSATMGSNVEDLAKSTIQERKDLSGTTKSYPLIRLVVGLKDSAIPNIQHKLVYA 488
Query: 120 GSEEGKLLALRQSFAES--------LNPPVLIFVQSKDRAKELYGELAFD-------DIR 164
+E+GKLL LRQ + L PP LIF Q+ RA L+ EL +D R
Sbjct: 489 ATEQGKLLGLRQLLHPTARTATDVHLRPPFLIFTQTIPRAVALHSELLYDIPPEAGGSSR 548
Query: 165 AGVIHSDLSQTQ 176
V+HS+LS +Q
Sbjct: 549 IAVLHSELSDSQ 560
>sp|Q5A4E2|DED1_CANAL ATP-dependent RNA helicase DED1 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=DED1 PE=3 SV=1
Length = 672
Score = 94.0 bits (232), Expect = 5e-19, Method: Composition-based stats.
Identities = 56/164 (34%), Positives = 91/164 (55%), Gaps = 5/164 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL+ + R K+ L+ + YLVLDEAD++ ++G I +V+ C P++
Sbjct: 320 CDLLVATPGRLKDLLDRGKVSLANIRYLVLDEADRMLDMG-FEPQIRYIVEECDMPAVKD 378
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + D V + VGR + SE+I QK+++ +E K + L
Sbjct: 379 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKILYVEDDEKKSVIL-DL 437
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + N ++F ++K A L L A IH D SQ +
Sbjct: 438 LSANENGLTIVFTETKRMADNLADYLYDQGFPATAIHGDRSQYE 481
>sp|A5DQS0|DED1_PICGU ATP-dependent RNA helicase DED1 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=DED1 PE=3 SV=3
Length = 637
Score = 94.0 bits (232), Expect = 5e-19, Method: Composition-based stats.
Identities = 56/164 (34%), Positives = 91/164 (55%), Gaps = 5/164 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL+ + R ++ LS ++YLVLDEAD++ ++G I +V+ C P +
Sbjct: 303 CDLLVATPGRLKDLLERGRVSLSNIKYLVLDEADRMLDMG-FEPQIRHIVQECDMPGVES 361
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + D + + VGR + SE+I QK+++ +E K + L
Sbjct: 362 RQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGSTSENITQKVLYVEDDEKKSVLL-DL 420
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + N +IF ++K A L L A IH D SQ +
Sbjct: 421 LSANDNGLTIIFTETKRMADNLADFLYDQGFPATAIHGDRSQYE 464
>sp|A2QAB5|ROK1_ASPNC ATP-dependent RNA helicase rok1 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=rok1 PE=3 SV=2
Length = 729
Score = 93.6 bits (231), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 107/192 (55%), Gaps = 32/192 (16%)
Query: 16 CDILISTPLRL--RLAIRRKK--IDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP 71
DIL++TPL L L+ R K L V +VLDEAD L + + +D + ++C++P
Sbjct: 354 SDILVTTPLLLVNALSANRTKPLATLPLVRNVVLDEADVLLDPLFRDQTLD-IWRSCTHP 412
Query: 72 SIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASESIKQKLVFA 119
+ SL+SAT+ VE+LA+S + + +R++VG K++A +IK KLV+A
Sbjct: 413 ELRASLWSATMGSNVEDLAKSTIKERKDTLSETKSYPLLRLVVGLKDSAIPNIKHKLVYA 472
Query: 120 GSEEGKLLALRQ----SFAES----LNPPVLIFVQSKDRAKELYGELAFD-------DIR 164
+E+GKLL LRQ + A S L PP LIF Q+ RA L+ EL +D R
Sbjct: 473 ATEQGKLLGLRQLLHPAAASSTDIRLRPPFLIFTQTIPRAVALHSELRYDIPPEAGGSSR 532
Query: 165 AGVIHSDLSQTQ 176
V+HS+LS Q
Sbjct: 533 IAVLHSELSDGQ 544
>sp|A5DZE6|DED1_LODEL ATP-dependent RNA helicase DED1 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=DED1 PE=3 SV=1
Length = 664
Score = 93.6 bits (231), Expect = 6e-19, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 93/166 (56%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL+ + R ++ L+ ++YLVLDEAD++ ++G I +V+ C P +
Sbjct: 309 CDLLVATPGRLKDLLERGRVSLANIKYLVLDEADRMLDMG-FEPQIRHIVQECDMPDVQD 367
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + D + + VGR + SE+I QK+++ EE K +L L
Sbjct: 368 RQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGSTSENITQKVLYVEDEEKKSVILDLL 427
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ +E L ++F ++K A L L A IH D SQ +
Sbjct: 428 NANSEGL---TIVFTETKRMADNLADFLYDQGFPATAIHGDRSQYE 470
>sp|A4RHF1|DED1_MAGO7 ATP-dependent RNA helicase DED1 OS=Magnaporthe oryzae (strain 70-15
/ ATCC MYA-4617 / FGSC 8958) GN=DED1 PE=3 SV=2
Length = 671
Score = 92.8 bits (229), Expect = 9e-19, Method: Composition-based stats.
Identities = 55/164 (33%), Positives = 91/164 (55%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P++
Sbjct: 325 CDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPNVQD 383
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++++LAR + D + + VGR + SE+I Q+++ + K+ L
Sbjct: 384 RQTLMFSATFPGYIQQLARDFLKDYIFLSVGRVGSTSENITQRVMEVKHRDDKISHLLDL 443
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ LIFV++K A EL L ++ A IH D +Q +
Sbjct: 444 LSTHGGGLTLIFVETKRNADELSDFLQNQNLPATSIHGDRTQRE 487
>sp|A3LQ01|DED1_PICST ATP-dependent RNA helicase DED1 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=DED1 PE=3 SV=3
Length = 647
Score = 92.0 bits (227), Expect = 2e-18, Method: Composition-based stats.
Identities = 58/166 (34%), Positives = 91/166 (54%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL+ + R ++ L+ ++YLVLDEAD++ ++G I +V+ C P +
Sbjct: 302 CDLLVATPGRLKDLLERGRVSLANIKYLVLDEADRMLDMG-FEPQIRHIVQECDMPDVQD 360
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + D + + VGR + SE+I QK+++ EE K LL L
Sbjct: 361 RQTLMFSATFPTDIQMLARDFLKDYIFLSVGRVGSTSENITQKILYVEDEEKKSVLLDLL 420
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ L +IF ++K A L L A IH D SQ +
Sbjct: 421 SAGDAGL---TIIFTETKRMADNLADFLYDQGFPATAIHGDRSQYE 463
>sp|Q6BU54|DED1_DEBHA ATP-dependent RNA helicase DED1 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=DED1 PE=3 SV=1
Length = 630
Score = 91.7 bits (226), Expect = 2e-18, Method: Composition-based stats.
Identities = 55/164 (33%), Positives = 91/164 (55%), Gaps = 5/164 (3%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL+ + R ++ L+ ++YLVLDEAD++ ++G I +V+ C P +
Sbjct: 290 CDLLVATPGRLKDLLERGRVSLASIKYLVLDEADRMLDMG-FEPQIRHIVQECDMPGVED 348
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LAR + + + + VGR + SE+I QK+++ EE K + L
Sbjct: 349 RQTLMFSATFPKEIQFLARDFLKEYIFLSVGRVGSTSENITQKILYVEDEEKKSVLL-DL 407
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
+ + N +IF ++K A L L A IH D SQ +
Sbjct: 408 LSANDNGLTIIFTETKRMADNLADFLYDQGFPATAIHGDRSQYE 451
>sp|Q6CLR3|DED1_KLULA ATP-dependent RNA helicase DED1 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=DED1 PE=3 SV=1
Length = 627
Score = 90.9 bits (224), Expect = 4e-18, Method: Composition-based stats.
Identities = 58/169 (34%), Positives = 93/169 (55%), Gaps = 9/169 (5%)
Query: 13 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 72
++ C++L++TP RL + R+ I L+ V+YLVLDEAD++ ++G I +V+ PS
Sbjct: 290 RYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMG-FEPQIRRIVEGSDMPS 348
Query: 73 IVRS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAG--SEEGKLL 127
+ +FSAT P ++ LA + D V + VGR + SE+I QK+++ + LL
Sbjct: 349 VDNRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVEDFDKNDTLL 408
Query: 128 ALRQSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
L + E L LIFV++K A L L + +A IH D +Q +
Sbjct: 409 DLLAASNEGL---TLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGE 454
>sp|Q6CB69|DED1_YARLI ATP-dependent RNA helicase DED1 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=DED1 PE=3 SV=1
Length = 618
Score = 89.4 bits (220), Expect = 1e-17, Method: Composition-based stats.
Identities = 58/163 (35%), Positives = 89/163 (54%), Gaps = 7/163 (4%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++ P RL I R K+ L ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 295 CDLLVAAPGRLVDLIDRGKVSLENIKYLVLDEADRMLDMG-FEPQIRAIVQGSGMPDVNE 353
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEG-KLLALRQ 131
+FSAT P ++ LAR + D + + VGR + SE+I QK+ + E+G K+ AL
Sbjct: 354 RQTLMFSATFPRNIQMLARDFLKDYIFLSVGRVGSTSENITQKVEYV--EDGDKISALLD 411
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQ 174
+ + L+FV++K A L L +D A IH D SQ
Sbjct: 412 ILSAAGKGLTLVFVETKRGADYLCDVLQSEDFPATSIHGDRSQ 454
>sp|P0CQ74|DED1_CRYNJ ATP-dependent RNA helicase ded1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=DED1 PE=3 SV=1
Length = 637
Score = 88.6 bits (218), Expect = 2e-17, Method: Composition-based stats.
Identities = 57/164 (34%), Positives = 89/164 (54%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L +TP RL I R KI L+ V+YLVLDEAD++ ++G I +V P ++
Sbjct: 298 CDLLSATPGRLVDLIERGKISLANVKYLVLDEADRMLDMG-FEPQIRRIVDEEDMPGVLE 356
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LARS + + + + VGR + SE+I Q++ + ++ + L L
Sbjct: 357 RQTLMFSATFPREIQNLARSFLKEYIFLTVGRVGSTSENITQRVEYVDDQDKRSLLLDLL 416
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
AE +L+FV++K A L L A IH D +Q +
Sbjct: 417 LAEQSGGLILVFVETKRMADTLCDFLCSRRHNATSIHGDRTQRE 460
>sp|P0CQ75|DED1_CRYNB ATP-dependent RNA helicase ded1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=DED1 PE=3 SV=1
Length = 637
Score = 88.6 bits (218), Expect = 2e-17, Method: Composition-based stats.
Identities = 57/164 (34%), Positives = 89/164 (54%), Gaps = 4/164 (2%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L +TP RL I R KI L+ V+YLVLDEAD++ ++G I +V P ++
Sbjct: 298 CDLLSATPGRLVDLIERGKISLANVKYLVLDEADRMLDMG-FEPQIRRIVDEEDMPGVLE 356
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 132
+FSAT P ++ LARS + + + + VGR + SE+I Q++ + ++ + L L
Sbjct: 357 RQTLMFSATFPREIQNLARSFLKEYIFLTVGRVGSTSENITQRVEYVDDQDKRSLLLDLL 416
Query: 133 FAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
AE +L+FV++K A L L A IH D +Q +
Sbjct: 417 LAEQSGGLILVFVETKRMADTLCDFLCSRRHNATSIHGDRTQRE 460
>sp|Q75B50|DED1_ASHGO ATP-dependent RNA helicase DED1 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DED1
PE=3 SV=2
Length = 623
Score = 87.0 bits (214), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 88/165 (53%), Gaps = 5/165 (3%)
Query: 15 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 74
CD++++TP RL + R KI L V+YLVLDEAD++ ++G I +V+ C P++
Sbjct: 278 GCDLIVATPGRLNDLLERGKISLCSVKYLVLDEADRMLDMG-FEPQIRHIVEGCDMPTVE 336
Query: 75 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 131
+FSAT P ++ LA + D + + VGR + SE+I QK++ + K L
Sbjct: 337 NRQTLMFSATFPTDIQHLAADFLKDYIFLSVGRVGSTSENITQKVLHV-EDIDKRSVLLD 395
Query: 132 SFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
A S L+FV++K A L L ++ A IH D +Q +
Sbjct: 396 LLAASDGGLTLVFVETKRMADALTDFLIMQNLSATAIHGDRTQAE 440
>sp|Q4I7K4|DED1_GIBZE ATP-dependent RNA helicase DED1 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=DED1 PE=3
SV=1
Length = 675
Score = 87.0 bits (214), Expect = 6e-17, Method: Composition-based stats.
Identities = 58/166 (34%), Positives = 89/166 (53%), Gaps = 9/166 (5%)
Query: 16 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 75
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 322 CDLLVATPGRLVDLIERGRISLQNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPQVQD 380
Query: 76 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 130
+FSAT P ++ LAR + D + + VGR + SE+I QK+ + + + LL +
Sbjct: 381 RQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGSTSENITQKVEYVEDVDKRSVLLDIL 440
Query: 131 QSFAESLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
S A L LIFV++K A L L + A IH D +Q +
Sbjct: 441 HSHANGL---TLIFVETKRMADSLSDFLINQNFPATSIHGDRTQRE 483
>sp|Q7ZY47|DDX42_XENLA ATP-dependent RNA helicase DDX42 OS=Xenopus laevis GN=ddx42 PE=2
SV=1
Length = 947
Score = 87.0 bits (214), Expect = 6e-17, Method: Composition-based stats.
Identities = 58/164 (35%), Positives = 89/164 (54%), Gaps = 9/164 (5%)
Query: 17 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSI 73
+I++ TP RL +++K +L RV YLV DEAD++F++G + V++ +N P
Sbjct: 375 EIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDMG-----FEYQVRSIANHVRPDR 429
Query: 74 VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 133
LFSAT +E+LAR I+ D +RV+ G A+E I Q + S K L +
Sbjct: 430 QTLLFSATFRKKIEKLARDILVDPIRVVQGDIGEANEDITQVVEILPSGPEKWTWLTRRL 489
Query: 134 AE-SLNPPVLIFVQSKDRAKELYGELAFDDIRAGVIHSDLSQTQ 176
E + VL+FV K A+EL L DD G++H D+ Q++
Sbjct: 490 VEFTSTGSVLVFVTKKANAEELAANLRQDDHPLGLLHGDMDQSE 533
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,610,280
Number of Sequences: 539616
Number of extensions: 2103356
Number of successful extensions: 9145
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 807
Number of HSP's successfully gapped in prelim test: 362
Number of HSP's that attempted gapping in prelim test: 7138
Number of HSP's gapped (non-prelim): 1188
length of query: 178
length of database: 191,569,459
effective HSP length: 110
effective length of query: 68
effective length of database: 132,211,699
effective search space: 8990395532
effective search space used: 8990395532
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)