Query 030401
Match_columns 178
No_of_seqs 145 out of 1092
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 13:10:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030401.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/030401hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02216 protein SRG1 100.0 1.1E-54 2.4E-59 368.4 18.4 178 1-178 178-357 (357)
2 PLN02639 oxidoreductase, 2OG-F 100.0 1E-53 2.2E-58 360.3 18.8 177 1-177 159-336 (337)
3 PLN03001 oxidoreductase, 2OG-F 100.0 1.1E-53 2.5E-58 348.7 18.1 175 1-176 85-260 (262)
4 PLN02758 oxidoreductase, 2OG-F 100.0 2E-53 4.3E-58 361.3 17.9 178 1-178 180-359 (361)
5 PLN02947 oxidoreductase 100.0 2.1E-53 4.5E-58 362.3 17.3 177 1-178 191-371 (374)
6 PLN02912 oxidoreductase, 2OG-F 100.0 3.3E-53 7.1E-58 358.4 18.1 177 1-178 166-345 (348)
7 PLN02276 gibberellin 20-oxidas 100.0 3.3E-53 7.1E-58 360.0 17.8 176 1-177 175-351 (361)
8 PLN02904 oxidoreductase 100.0 5.8E-53 1.3E-57 357.9 18.5 176 1-178 177-354 (357)
9 PLN02254 gibberellin 3-beta-di 100.0 9.6E-53 2.1E-57 356.6 17.5 168 1-169 174-347 (358)
10 PLN03178 leucoanthocyanidin di 100.0 9.1E-53 2E-57 357.3 16.8 177 1-178 177-358 (360)
11 PLN02299 1-aminocyclopropane-1 100.0 3.1E-52 6.8E-57 349.1 17.4 178 1-178 124-308 (321)
12 PLN02393 leucoanthocyanidin di 100.0 4.3E-52 9.4E-57 353.3 18.1 178 1-178 179-360 (362)
13 PLN02997 flavonol synthase 100.0 2.4E-51 5.2E-56 344.2 18.0 165 1-166 150-316 (325)
14 PLN02750 oxidoreductase, 2OG-F 100.0 3.1E-51 6.6E-56 346.2 18.1 168 1-169 162-331 (345)
15 PLN02704 flavonol synthase 100.0 4.8E-51 1E-55 343.9 16.7 165 1-166 166-332 (335)
16 PLN02365 2-oxoglutarate-depend 100.0 1.2E-50 2.5E-55 336.9 17.1 172 1-177 121-297 (300)
17 PLN02515 naringenin,2-oxogluta 100.0 2.3E-50 4.9E-55 342.1 18.0 167 1-169 164-332 (358)
18 PLN02156 gibberellin 2-beta-di 100.0 2.8E-50 6.1E-55 338.7 18.0 168 1-169 144-317 (335)
19 PLN00417 oxidoreductase, 2OG-F 100.0 2.3E-50 5.1E-55 341.0 17.2 173 1-175 171-345 (348)
20 PLN03002 oxidoreductase, 2OG-F 100.0 3.3E-50 7.2E-55 338.3 16.4 167 1-169 149-323 (332)
21 PTZ00273 oxidase reductase; Pr 100.0 5.2E-50 1.1E-54 335.7 16.8 167 1-169 146-314 (320)
22 KOG0143 Iron/ascorbate family 100.0 1.1E-49 2.4E-54 333.4 16.8 174 1-175 144-320 (322)
23 PLN02485 oxidoreductase 100.0 1.4E-49 2.9E-54 334.3 17.1 168 1-168 152-327 (329)
24 PLN02984 oxidoreductase, 2OG-F 100.0 3E-49 6.4E-54 333.2 17.7 167 1-178 167-339 (341)
25 PLN02403 aminocyclopropanecarb 100.0 7.5E-49 1.6E-53 326.2 17.2 171 1-178 119-296 (303)
26 COG3491 PcbC Isopenicillin N s 100.0 8.1E-46 1.8E-50 302.0 15.3 166 1-167 143-315 (322)
27 PF03171 2OG-FeII_Oxy: 2OG-Fe( 99.9 2.3E-27 5.1E-32 166.2 7.9 95 32-130 2-98 (98)
28 smart00702 P4Hc Prolyl 4-hydro 96.9 0.018 3.9E-07 44.0 10.7 107 3-129 59-178 (178)
29 PF13640 2OG-FeII_Oxy_3: 2OG-F 96.7 0.00081 1.8E-08 46.5 1.7 79 34-129 1-100 (100)
30 PRK05467 Fe(II)-dependent oxyg 96.5 0.034 7.3E-07 44.7 9.6 107 4-128 52-176 (226)
31 PF13532 2OG-FeII_Oxy_2: 2OG-F 93.1 0.82 1.8E-05 35.0 8.4 88 31-126 96-193 (194)
32 PF12851 Tet_JBP: Oxygenase do 92.9 0.48 1E-05 36.4 6.7 71 48-129 84-170 (171)
33 PRK15401 alpha-ketoglutarate-d 91.0 6.9 0.00015 31.2 12.4 87 31-127 115-211 (213)
34 TIGR02466 conserved hypothetic 86.8 4.6 0.0001 31.9 7.7 39 78-128 159-198 (201)
35 PLN00052 prolyl 4-hydroxylase; 77.0 44 0.00095 28.2 10.6 111 4-132 112-254 (310)
36 TIGR00568 alkb DNA alkylation 74.8 30 0.00066 26.4 8.3 59 30-97 93-162 (169)
37 PF13759 2OG-FeII_Oxy_5: Putat 74.2 3.4 7.3E-05 28.5 2.7 37 78-126 63-100 (101)
38 COG3128 PiuC Uncharacterized i 62.2 56 0.0012 25.8 7.3 22 108-129 159-180 (229)
39 smart00460 TGc Transglutaminas 41.5 27 0.00059 21.4 2.4 16 72-87 53-68 (68)
40 COG2140 Thermophilic glucose-6 41.1 73 0.0016 25.4 5.1 37 77-113 132-168 (209)
41 PRK01964 4-oxalocrotonate taut 35.0 46 0.001 20.6 2.7 21 2-22 18-38 (64)
42 PRK02220 4-oxalocrotonate taut 33.7 53 0.0011 19.9 2.7 21 2-22 18-38 (61)
43 PF01361 Tautomerase: Tautomer 33.6 40 0.00087 20.5 2.2 21 2-22 17-37 (60)
44 TIGR00013 taut 4-oxalocrotonat 33.2 50 0.0011 20.2 2.6 20 2-21 18-37 (63)
45 PRK02289 4-oxalocrotonate taut 31.8 41 0.00088 20.7 2.0 21 2-22 18-38 (60)
46 PRK00745 4-oxalocrotonate taut 30.5 59 0.0013 19.8 2.6 21 2-22 18-38 (62)
47 cd00491 4Oxalocrotonate_Tautom 30.1 60 0.0013 19.3 2.5 20 2-21 17-36 (58)
48 PF05118 Asp_Arg_Hydrox: Aspar 29.7 43 0.00093 25.2 2.1 37 90-126 117-157 (163)
49 PRK01271 4-oxalocrotonate taut 24.8 62 0.0013 21.4 2.0 21 2-22 19-39 (76)
50 PF12566 DUF3748: Protein of u 23.6 1.1E+02 0.0024 22.2 3.1 58 78-140 38-95 (122)
51 PTZ00397 macrophage migration 22.6 84 0.0018 22.0 2.5 20 2-21 75-94 (116)
52 PF08140 Cuticle_1: Crustacean 21.9 56 0.0012 19.0 1.1 30 75-105 7-36 (40)
53 PF11142 DUF2917: Protein of u 21.1 86 0.0019 19.8 2.0 34 72-105 20-53 (63)
54 PF10777 YlaC: Inner membrane 20.3 45 0.00098 25.2 0.7 22 69-90 93-114 (155)
55 COG2879 Uncharacterized small 20.2 1.2E+02 0.0025 19.5 2.4 20 150-169 38-57 (65)
56 KOG3710 EGL-Nine (EGLN) protei 20.1 4.7E+02 0.01 21.5 6.4 68 51-129 162-238 (280)
No 1
>PLN02216 protein SRG1
Probab=100.00 E-value=1.1e-54 Score=368.44 Aligned_cols=178 Identities=39% Similarity=0.756 Sum_probs=169.8
Q ss_pred CHHHHHHHHHHHHHHCCCChhhHHHhhcC-CcceEEEeccCCCCCCCCCccccCCCCCCCeeEEeeeCCcCceEEEECCe
Q 030401 1 MRKVATSLVRSMAMALELEAQEISDAYQE-GLYEVRTTLYPPCPEPERVIGITQHADYSGITLLLECGNIPGLQVLKDGQ 79 (178)
Q Consensus 1 m~~l~~~ll~~l~~~Lgl~~~~~~~~~~~-~~~~lr~~~Yp~~~~~~~~~g~~~H~D~~~lTll~q~~~~~GLqv~~~g~ 79 (178)
|.+|+.+|+++||++|||++++|.+.+.. ..+.+|++|||||++++..+|+++|||+|+||||+|+++++||||+++|+
T Consensus 178 ~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~lRl~~YPp~p~~~~~~G~~~HtD~g~lTlL~q~~~v~GLQV~~~g~ 257 (357)
T PLN02216 178 VKSIAKILFAKMASALEIKPEEMEKLFDDDLGQSIRMNYYPPCPQPDQVIGLTPHSDAVGLTILLQVNEVEGLQIKKDGK 257 (357)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHhccCchheeEEeecCCCCCcccccCccCcccCceEEEEEecCCCCceeEEECCE
Confidence 57899999999999999999999999876 36789999999999988899999999999999999955799999999999
Q ss_pred EEEecCCCCcEEEecchhHHHhccCcccCCCCCCCCCCCCceEEEEEeeccCCCcEEecCccccCCCCCCCCCCccHHHH
Q 030401 80 WVTVIPVDGAIVANIGHIMEIMSNGIYKAPDHRAMVNRFKERRSITTFCFPSSSVKIGPAKEFTKSGTPPLYRTLTYAEY 159 (178)
Q Consensus 80 W~~v~~~~~~~vvn~Gd~l~~~TnG~~~s~~HRV~~~~~~~R~S~~~F~~p~~d~~i~p~~~~~~~~~p~~y~~~~~~d~ 159 (178)
|++|+|++|++|||+||+||+||||+|||+.|||+.++.++|+|++||+.|+.|++|+|+++++++++|++|++++++||
T Consensus 258 Wi~V~p~pgalvVNiGD~L~~~TNG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~~i~p~~~lv~~~~p~~Y~~~t~~ey 337 (357)
T PLN02216 258 WVSVKPLPNALVVNVGDILEIITNGTYRSIEHRGVVNSEKERLSVATFHNTGMGKEIGPAKSLVERQKAALFKSLTTKEY 337 (357)
T ss_pred EEECCCCCCeEEEEcchhhHhhcCCeeeccCceeecCCCCCEEEEEEEecCCCCCeEeCcHHHcCCCCCCCCCCcCHHHH
Confidence 99999999999999999999999999999999999888889999999999999999999999999999999999999999
Q ss_pred HHHHHHcccC-cchhhhcCC
Q 030401 160 RHIFYNRRLD-VSFIDMLKL 178 (178)
Q Consensus 160 ~~~~~~~~~~-~~~l~~~~~ 178 (178)
+..++++... +..++.+||
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~ 357 (357)
T PLN02216 338 FDGLFSRELDGKAYLDAMRI 357 (357)
T ss_pred HHHHHhcccCCcchhhhhcC
Confidence 9999999998 999999987
No 2
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1e-53 Score=360.31 Aligned_cols=177 Identities=42% Similarity=0.713 Sum_probs=167.9
Q ss_pred CHHHHHHHHHHHHHHCCCChhhHHHhhcCCcceEEEeccCCCCCCCCCccccCCCCCCCeeEEeeeCCcCceEEEECCeE
Q 030401 1 MRKVATSLVRSMAMALELEAQEISDAYQEGLYEVRTTLYPPCPEPERVIGITQHADYSGITLLLECGNIPGLQVLKDGQW 80 (178)
Q Consensus 1 m~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~H~D~~~lTll~q~~~~~GLqv~~~g~W 80 (178)
|.+++.+|++++|++|||++++|.+.+..+.+.+|++|||++++++..+|+++|||+|+||||+|+++++||||+++|+|
T Consensus 159 ~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HTD~g~lTlL~qd~~v~GLQV~~~g~W 238 (337)
T PLN02639 159 VRELGFRLQEAISESLGLEKDYIKNVLGEQGQHMAVNYYPPCPEPELTYGLPAHTDPNALTILLQDQQVAGLQVLKDGKW 238 (337)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHhCCCccEEEEEcCCCCCCcccccCCCCCcCCCceEEEEecCCcCceEeecCCeE
Confidence 57899999999999999999999999888888999999999998888999999999999999999335999999999999
Q ss_pred EEecCCCCcEEEecchhHHHhccCcccCCCCCCCCCCCCceEEEEEeeccCCCcEEecCccccCCCCCCCCCCccHHHHH
Q 030401 81 VTVIPVDGAIVANIGHIMEIMSNGIYKAPDHRAMVNRFKERRSITTFCFPSSSVKIGPAKEFTKSGTPPLYRTLTYAEYR 160 (178)
Q Consensus 81 ~~v~~~~~~~vvn~Gd~l~~~TnG~~~s~~HRV~~~~~~~R~S~~~F~~p~~d~~i~p~~~~~~~~~p~~y~~~~~~d~~ 160 (178)
++|+|.+|++|||+||+|++||||+|+|+.|||+.++.++|||++||++|+.|++|.|+++++++++|++|+|++++||+
T Consensus 239 i~V~p~pg~lVVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~~~~~~~p~~y~p~~~~e~~ 318 (337)
T PLN02639 239 VAVNPHPGAFVINIGDQLQALSNGRYKSVWHRAVVNTDKERMSVASFLCPCDDAVISPAKKLTDDGTAAVYRDFTYAEYY 318 (337)
T ss_pred EeccCCCCeEEEechhHHHHHhCCeeeccCcccccCCCCCEEEEEEEecCCCCceEeCchHHcCCCCCCCCCCCCHHHHH
Confidence 99999999999999999999999999999999998888899999999999999999999999999999999999999999
Q ss_pred HHHHHcccC-cchhhhcC
Q 030401 161 HIFYNRRLD-VSFIDMLK 177 (178)
Q Consensus 161 ~~~~~~~~~-~~~l~~~~ 177 (178)
+.++.+... ++.|+.++
T Consensus 319 ~~~~~~~~~~~~~l~~~~ 336 (337)
T PLN02639 319 KKFWSRNLDQEHCLELFK 336 (337)
T ss_pred HHHHhccCCCchhhHhhc
Confidence 999998888 88888775
No 3
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.1e-53 Score=348.69 Aligned_cols=175 Identities=37% Similarity=0.674 Sum_probs=165.7
Q ss_pred CHHHHHHHHHHHHHHCCCChhhHHHhhcCCcceEEEeccCCCCCCCCCccccCCCCCCCeeEEeeeCCcCceEEEECCeE
Q 030401 1 MRKVATSLVRSMAMALELEAQEISDAYQEGLYEVRTTLYPPCPEPERVIGITQHADYSGITLLLECGNIPGLQVLKDGQW 80 (178)
Q Consensus 1 m~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~H~D~~~lTll~q~~~~~GLqv~~~g~W 80 (178)
|.+|+.+|++++|++||+++++|.+.+....+.+|++|||++++++..+|+++|||+|+||||+| |+++||||+++|+|
T Consensus 85 ~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HtD~g~lTlL~q-d~v~GLqV~~~g~W 163 (262)
T PLN03001 85 MKALAQKLLAFISESLGLPCSCIEDAVGDFYQNITVSYYPPCPQPELTLGLQSHSDFGAITLLIQ-DDVEGLQLLKDAEW 163 (262)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHhcCcchhheeecCCCCCCcccccCCcCCcCCCeeEEEEe-CCCCceEEeeCCeE
Confidence 57899999999999999999999999888788899999999998888999999999999999999 88999999999999
Q ss_pred EEecCCCCcEEEecchhHHHhccCcccCCCCCCCCCCCCceEEEEEeeccCCCcEEecCccccCCCCCCCCCCccHHHHH
Q 030401 81 VTVIPVDGAIVANIGHIMEIMSNGIYKAPDHRAMVNRFKERRSITTFCFPSSSVKIGPAKEFTKSGTPPLYRTLTYAEYR 160 (178)
Q Consensus 81 ~~v~~~~~~~vvn~Gd~l~~~TnG~~~s~~HRV~~~~~~~R~S~~~F~~p~~d~~i~p~~~~~~~~~p~~y~~~~~~d~~ 160 (178)
++|+|.+|++|||+||+|++||||+|+|+.|||+.+..++|||++||+.|+.|++|+|+++++++++|++|+|++++||+
T Consensus 164 i~V~p~p~a~vVNiGD~l~~~tng~~~S~~HRVv~~~~~~R~Sia~F~~p~~d~~i~p~~e~v~~~~p~~y~~~~~~e~l 243 (262)
T PLN03001 164 LMVPPISDAILIIIADQTEIITNGNYKSAQHRAIANANKARLSVATFHDPAKTAKIAPASALSTESFPPRYCEIVYGEYV 243 (262)
T ss_pred EECCCCCCcEEEEccHHHHHHhCCccccccceEEcCCCCCEEEEEEEEcCCCCCEEeCChHhcCCCCCCcCCCccHHHHH
Confidence 99999999999999999999999999999999999888899999999999999999999999999999999999999999
Q ss_pred HHHHHcccC-cchhhhc
Q 030401 161 HIFYNRRLD-VSFIDML 176 (178)
Q Consensus 161 ~~~~~~~~~-~~~l~~~ 176 (178)
..++++... +..++.+
T Consensus 244 ~~~~~~~~~~~~~~~~~ 260 (262)
T PLN03001 244 SSWYSKGPEGKRNIDAL 260 (262)
T ss_pred HHHHHhccCCcchhhhh
Confidence 999998776 7776654
No 4
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=2e-53 Score=361.32 Aligned_cols=178 Identities=37% Similarity=0.683 Sum_probs=169.2
Q ss_pred CHHHHHHHHHHHHHHCCCChhhHHHhhcCCcceEEEeccCCCCCCCCCccccCCCCCCCeeEEeeeC-CcCceEEEECCe
Q 030401 1 MRKVATSLVRSMAMALELEAQEISDAYQEGLYEVRTTLYPPCPEPERVIGITQHADYSGITLLLECG-NIPGLQVLKDGQ 79 (178)
Q Consensus 1 m~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~H~D~~~lTll~q~~-~~~GLqv~~~g~ 79 (178)
|.+++.+|+++|+++||+++++|.+.+..+.+.+|++|||+|++++..+|+++|||+|+||||+|++ +++||||+++|+
T Consensus 180 ~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lR~~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~~~v~GLQV~~~g~ 259 (361)
T PLN02758 180 IRELCQRLLKYIAMTLGLKEDRFEEMFGEAVQAVRMNYYPPCSRPDLVLGLSPHSDGSALTVLQQGKGSCVGLQILKDNT 259 (361)
T ss_pred HHHHHHHHHHHHHHHcCCChhhhHHHhcCccceeeeecCCCCCCcccccCccCccCCceeEEEEeCCCCCCCeeeeeCCE
Confidence 5789999999999999999999999998888999999999999988899999999999999999933 489999999999
Q ss_pred EEEecCCCCcEEEecchhHHHhccCcccCCCCCCCCCCCCceEEEEEeeccCCCcEEecCccccCCCCCCCCCCccHHHH
Q 030401 80 WVTVIPVDGAIVANIGHIMEIMSNGIYKAPDHRAMVNRFKERRSITTFCFPSSSVKIGPAKEFTKSGTPPLYRTLTYAEY 159 (178)
Q Consensus 80 W~~v~~~~~~~vvn~Gd~l~~~TnG~~~s~~HRV~~~~~~~R~S~~~F~~p~~d~~i~p~~~~~~~~~p~~y~~~~~~d~ 159 (178)
|++|+|.+|++|||+||+||+||||+|||+.|||+.++.++|||++||+.|+.|++|.|+++++++++|++|++++++||
T Consensus 260 Wi~V~p~pgalVVNiGD~L~~~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~i~pl~elv~~~~p~~Y~~~~~~ey 339 (361)
T PLN02758 260 WVPVHPVPNALVINIGDTLEVLTNGKYKSVEHRAVTNKEKDRLSIVTFYAPSYEVELGPMPELVDDENPCKYRRYNHGEY 339 (361)
T ss_pred EEeCCCCCCeEEEEccchhhhhcCCeeecccceeecCCCCCEEEEEEEecCCCCCeEeCCHHHcCCCCCCcCCCccHHHH
Confidence 99999999999999999999999999999999999888889999999999999999999999999999999999999999
Q ss_pred HHHHHHcccC-cchhhhcCC
Q 030401 160 RHIFYNRRLD-VSFIDMLKL 178 (178)
Q Consensus 160 ~~~~~~~~~~-~~~l~~~~~ 178 (178)
+..++++..+ ++.++.+||
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~ 359 (361)
T PLN02758 340 SRHYVTSKLQGKKTLEFAKI 359 (361)
T ss_pred HHHHHhcccCchhhhhhhcc
Confidence 9999999888 888888775
No 5
>PLN02947 oxidoreductase
Probab=100.00 E-value=2.1e-53 Score=362.34 Aligned_cols=177 Identities=32% Similarity=0.581 Sum_probs=168.1
Q ss_pred CHHHHHHHHHHHHHHCCCC---hhhHHHhhcCCcceEEEeccCCCCCCCCCccccCCCCCCCeeEEeeeCCcCceEEEEC
Q 030401 1 MRKVATSLVRSMAMALELE---AQEISDAYQEGLYEVRTTLYPPCPEPERVIGITQHADYSGITLLLECGNIPGLQVLKD 77 (178)
Q Consensus 1 m~~l~~~ll~~l~~~Lgl~---~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~H~D~~~lTll~q~~~~~GLqv~~~ 77 (178)
|.+|+.+|+++||++|||+ .++|.+.+..+.+.+|++|||||++++..+|+++|||+|+||||+| ++++||||+++
T Consensus 191 ~~~L~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lrln~YPp~p~~~~~~G~~~HTD~g~lTlL~Q-d~v~GLQV~~~ 269 (374)
T PLN02947 191 TKRLFLELMEAILESLGIVKRGSDELLEEFEAGSQMMVVNCYPACPEPELTLGMPPHSDYGFLTLLLQ-DEVEGLQIMHA 269 (374)
T ss_pred HHHHHHHHHHHHHHHcCCCccchHHHHHHhcCcceeeeeecCCCCCCcccccCCCCccCCCceEEEEe-cCCCCeeEeEC
Confidence 5789999999999999996 4677777777889999999999999999999999999999999999 88999999999
Q ss_pred CeEEEecCCCCcEEEecchhHHHhccCcccCCCCCCCCCCCCceEEEEEeeccCCCcEEecCccccCCCCCCCCCCccHH
Q 030401 78 GQWVTVIPVDGAIVANIGHIMEIMSNGIYKAPDHRAMVNRFKERRSITTFCFPSSSVKIGPAKEFTKSGTPPLYRTLTYA 157 (178)
Q Consensus 78 g~W~~v~~~~~~~vvn~Gd~l~~~TnG~~~s~~HRV~~~~~~~R~S~~~F~~p~~d~~i~p~~~~~~~~~p~~y~~~~~~ 157 (178)
|+|++|+|.+|++|||+||+||+||||+|||+.|||+.++.++|||++||+.|+.|++|.|+++++++++|++|++++++
T Consensus 270 g~Wi~V~p~pga~VVNvGD~Lq~~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~i~Pl~~lv~~~~p~~Y~~~~~~ 349 (374)
T PLN02947 270 GRWVTVEPIPGSFVVNVGDHLEIFSNGRYKSVLHRVRVNSTKPRISVASLHSLPFERVVGPAPELVDEQNPRRYMDTDFA 349 (374)
T ss_pred CEEEeCCCCCCeEEEEeCceeeeeeCCEEeccccccccCCCCCEEEEEEEecCCCCCEEeCChHhcCCCCCCcCCCCCHH
Confidence 99999999999999999999999999999999999998888899999999999999999999999999999999999999
Q ss_pred HHHHHHHHcccC-cchhhhcCC
Q 030401 158 EYRHIFYNRRLD-VSFIDMLKL 178 (178)
Q Consensus 158 d~~~~~~~~~~~-~~~l~~~~~ 178 (178)
||++.+.++... ++.++.+||
T Consensus 350 ey~~~~~~~~~~~~~~l~~~~~ 371 (374)
T PLN02947 350 TFLAYLASAEGKHKNFLESRKL 371 (374)
T ss_pred HHHHHHHHhccCchhhhhhhhc
Confidence 999999999888 899998885
No 6
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=3.3e-53 Score=358.43 Aligned_cols=177 Identities=38% Similarity=0.678 Sum_probs=167.6
Q ss_pred CHHHHHHHHHHHHHHCCCChhhHHHhhcCCcceEEEeccCCCCCCCCCccccCCCCCCCeeEEeeeCCcCceEEEECCeE
Q 030401 1 MRKVATSLVRSMAMALELEAQEISDAYQEGLYEVRTTLYPPCPEPERVIGITQHADYSGITLLLECGNIPGLQVLKDGQW 80 (178)
Q Consensus 1 m~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~H~D~~~lTll~q~~~~~GLqv~~~g~W 80 (178)
|.+++.+|++++|++|||++++|.+.+....+.+|++||||+++++..+|+++|||+|+||||+| |+++||||+++|+|
T Consensus 166 ~~~l~~~il~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YPp~~~~~~~~G~~~HtD~g~lTlL~Q-d~v~GLQV~~~g~W 244 (348)
T PLN02912 166 VRALVLTLLEAISESLGLEKDRVSNTLGKHGQHMAINYYPPCPQPELTYGLPGHKDANLITVLLQ-DEVSGLQVFKDGKW 244 (348)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHhcCccceeeeeecCCCCChhhcCCcCCCcCCCceEEEEE-CCCCceEEEECCcE
Confidence 57899999999999999999999999888889999999999998888999999999999999999 78999999999999
Q ss_pred EEecCCCCcEEEecchhHHHhccCcccCCCCCCCCCCCCceEEEEEeeccCCCcEEecCccccCCC--CCCCCCCccHHH
Q 030401 81 VTVIPVDGAIVANIGHIMEIMSNGIYKAPDHRAMVNRFKERRSITTFCFPSSSVKIGPAKEFTKSG--TPPLYRTLTYAE 158 (178)
Q Consensus 81 ~~v~~~~~~~vvn~Gd~l~~~TnG~~~s~~HRV~~~~~~~R~S~~~F~~p~~d~~i~p~~~~~~~~--~p~~y~~~~~~d 158 (178)
++|+|.+|++|||+||+|++||||+|+|+.|||+.++.++|||++||++|+.|+.|+|++++++++ +|++|++++++|
T Consensus 245 i~V~p~pgalvVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~~v~~~~~~p~~y~~~~~~e 324 (348)
T PLN02912 245 IAVNPIPNTFIVNLGDQMQVISNDKYKSVLHRAVVNTDKERISIPTFYCPSEDAVIGPAQELINEEEDSLAIYRNFTYAE 324 (348)
T ss_pred EECCCcCCeEEEEcCHHHHHHhCCEEEcccccccCCCCCCEEEEEEEecCCCCCeEeCCHHHhCcCCCCCCCCCCCcHHH
Confidence 999999999999999999999999999999999988888999999999999999999999999865 489999999999
Q ss_pred HHHHHHHcccC-cchhhhcCC
Q 030401 159 YRHIFYNRRLD-VSFIDMLKL 178 (178)
Q Consensus 159 ~~~~~~~~~~~-~~~l~~~~~ 178 (178)
|+..++++.+. ++.|+++|.
T Consensus 325 y~~~~~~~~~~~~~~l~~~~~ 345 (348)
T PLN02912 325 YFEKFWDTAFATESCIDSFKA 345 (348)
T ss_pred HHHHHHhcccCCcchhhhhhc
Confidence 99999998888 888988873
No 7
>PLN02276 gibberellin 20-oxidase
Probab=100.00 E-value=3.3e-53 Score=360.04 Aligned_cols=176 Identities=29% Similarity=0.540 Sum_probs=167.4
Q ss_pred CHHHHHHHHHHHHHHCCCChhhHHHhhcCCcceEEEeccCCCCCCCCCccccCCCCCCCeeEEeeeCCcCceEEEECCeE
Q 030401 1 MRKVATSLVRSMAMALELEAQEISDAYQEGLYEVRTTLYPPCPEPERVIGITQHADYSGITLLLECGNIPGLQVLKDGQW 80 (178)
Q Consensus 1 m~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~H~D~~~lTll~q~~~~~GLqv~~~g~W 80 (178)
|.+++.+|+++||++|||++++|.+.+..+.+.+|++|||++++++..+|+++|||+|+||||+| +.++||||+.+|+|
T Consensus 175 ~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HTD~g~lTlL~Q-d~v~GLQV~~~g~W 253 (361)
T PLN02276 175 MKTLSLKIMELLGISLGVDRGYYRKFFEDGDSIMRCNYYPPCQEPELTLGTGPHCDPTSLTILHQ-DQVGGLQVFVDNKW 253 (361)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHhcCccceeeeEeCCCCCCcccccCCccccCCceeEEEEe-cCCCceEEEECCEE
Confidence 57899999999999999999999999988889999999999998888999999999999999999 78999999999999
Q ss_pred EEecCCCCcEEEecchhHHHhccCcccCCCCCCCCCCCCceEEEEEeeccCCCcEEecCccccCCCCCCCCCCccHHHHH
Q 030401 81 VTVIPVDGAIVANIGHIMEIMSNGIYKAPDHRAMVNRFKERRSITTFCFPSSSVKIGPAKEFTKSGTPPLYRTLTYAEYR 160 (178)
Q Consensus 81 ~~v~~~~~~~vvn~Gd~l~~~TnG~~~s~~HRV~~~~~~~R~S~~~F~~p~~d~~i~p~~~~~~~~~p~~y~~~~~~d~~ 160 (178)
++|+|.+|++|||+||+|++||||+|+|+.|||+.++.++|||++||+.|+.|+.|.|+++++++++|++|++++++||+
T Consensus 254 i~V~p~pgalVVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~~~ey~ 333 (361)
T PLN02276 254 RSVRPRPGALVVNIGDTFMALSNGRYKSCLHRAVVNSERERRSLAFFLCPKEDKVVRPPQELVDREGPRKYPDFTWSDLL 333 (361)
T ss_pred EEcCCCCCeEEEEcHHHHHHHhCCccccccceeecCCCCCEEEEEEEecCCCCCEEeCChHhcCCCCCCcCCCCCHHHHH
Confidence 99999999999999999999999999999999998888999999999999999999999999999999999999999999
Q ss_pred HHHHHcccC-cchhhhcC
Q 030401 161 HIFYNRRLD-VSFIDMLK 177 (178)
Q Consensus 161 ~~~~~~~~~-~~~l~~~~ 177 (178)
+.+.++..+ ++.++.++
T Consensus 334 ~~~~~~~~~~~~~l~~~~ 351 (361)
T PLN02276 334 EFTQKHYRADMNTLQAFS 351 (361)
T ss_pred HHHHHhcccchhHHHHHH
Confidence 999988877 77777665
No 8
>PLN02904 oxidoreductase
Probab=100.00 E-value=5.8e-53 Score=357.91 Aligned_cols=176 Identities=31% Similarity=0.592 Sum_probs=167.4
Q ss_pred CHHHHHHHHHHHHHHCCCChhhHHHhhcCCcceEEEeccCCCCCCCCCccccCCCCCCCeeEEeeeCCcCceEEEE-CCe
Q 030401 1 MRKVATSLVRSMAMALELEAQEISDAYQEGLYEVRTTLYPPCPEPERVIGITQHADYSGITLLLECGNIPGLQVLK-DGQ 79 (178)
Q Consensus 1 m~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~H~D~~~lTll~q~~~~~GLqv~~-~g~ 79 (178)
|.+|+.+|+++||++|||++++|.+.+..+.+.+|++|||||++++..+|+++|||+|+||||+| + ++||||++ +|+
T Consensus 177 ~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YPp~p~~~~~~g~~~HtD~g~lTlL~q-d-~~GLQV~~~~g~ 254 (357)
T PLN02904 177 THVLHKQLIEAISESLGLEKNYLQEEIEEGSQVMAVNCYPACPEPEIALGMPPHSDFGSLTILLQ-S-SQGLQIMDCNKN 254 (357)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHhcCcccEEEeeecCCCCCcccccCCcCccCCCceEEEec-C-CCeeeEEeCCCC
Confidence 57899999999999999999999999988888999999999998888999999999999999999 5 48999997 799
Q ss_pred EEEecCCCCcEEEecchhHHHhccCcccCCCCCCCCCCCCceEEEEEeeccCCCcEEecCccccCCCCCCCCCCccHHHH
Q 030401 80 WVTVIPVDGAIVANIGHIMEIMSNGIYKAPDHRAMVNRFKERRSITTFCFPSSSVKIGPAKEFTKSGTPPLYRTLTYAEY 159 (178)
Q Consensus 80 W~~v~~~~~~~vvn~Gd~l~~~TnG~~~s~~HRV~~~~~~~R~S~~~F~~p~~d~~i~p~~~~~~~~~p~~y~~~~~~d~ 159 (178)
|++|+|.||++|||+||+||+||||+|||+.|||+.++..+|||++||+.|+.|+.|+|+++++++++|++|++++++||
T Consensus 255 Wi~V~p~pgalVVNiGD~Le~~TNG~~kSt~HRVv~~~~~~R~Si~~F~~p~~d~~i~Pl~~~v~~~~p~~Y~~~~~~ey 334 (357)
T PLN02904 255 WVCVPYIEGALIVQLGDQVEVMSNGIYKSVVHRVTVNKDYKRLSFASLHSLPLHKKISPAPELVNENKPAAYGEFSFNDF 334 (357)
T ss_pred EEECCCCCCeEEEEccHHHHHHhCCeeeccCCcccCCCCCCEEEEEEeecCCCCCeEeCCHHHcCCCCCCcCCCCCHHHH
Confidence 99999999999999999999999999999999999988889999999999999999999999999999999999999999
Q ss_pred HHHHHHcccC-cchhhhcCC
Q 030401 160 RHIFYNRRLD-VSFIDMLKL 178 (178)
Q Consensus 160 ~~~~~~~~~~-~~~l~~~~~ 178 (178)
++.++++..+ +..++.+|+
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~ 354 (357)
T PLN02904 335 LDYISSNDITQERFIDTLKK 354 (357)
T ss_pred HHHHHhcccCcchHHHHhcc
Confidence 9999999988 888888774
No 9
>PLN02254 gibberellin 3-beta-dioxygenase
Probab=100.00 E-value=9.6e-53 Score=356.57 Aligned_cols=168 Identities=37% Similarity=0.645 Sum_probs=158.0
Q ss_pred CHHHHHHHHHHHHHHCCCChhhHHHhh-----cCCcceEEEeccCCCCCCCCCccccCCCCCCCeeEEeeeCCcCceEEE
Q 030401 1 MRKVATSLVRSMAMALELEAQEISDAY-----QEGLYEVRTTLYPPCPEPERVIGITQHADYSGITLLLECGNIPGLQVL 75 (178)
Q Consensus 1 m~~l~~~ll~~l~~~Lgl~~~~~~~~~-----~~~~~~lr~~~Yp~~~~~~~~~g~~~H~D~~~lTll~q~~~~~GLqv~ 75 (178)
|.+|+.+|+++||++|||++++|.+.+ ..+.+.+|++|||||++++..+|+++|||+|+||||+| |+++||||+
T Consensus 174 ~~~L~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~~~lRl~~YPp~p~~~~~~G~~~HtD~g~lTiL~Q-d~v~GLQV~ 252 (358)
T PLN02254 174 MKKLAERLMWLMLGSLGITEEDIKWAGPKSGSQGAQAALQLNSYPVCPDPDRAMGLAPHTDSSLLTILYQ-SNTSGLQVF 252 (358)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHhhcccccCcceeEEEecCCCCCCcccccCcCCccCCCcEEEEec-CCCCCceEE
Confidence 578999999999999999999998766 45578999999999999888999999999999999999 889999999
Q ss_pred ECC-eEEEecCCCCcEEEecchhHHHhccCcccCCCCCCCCCCCCceEEEEEeeccCCCcEEecCccccCCCCCCCCCCc
Q 030401 76 KDG-QWVTVIPVDGAIVANIGHIMEIMSNGIYKAPDHRAMVNRFKERRSITTFCFPSSSVKIGPAKEFTKSGTPPLYRTL 154 (178)
Q Consensus 76 ~~g-~W~~v~~~~~~~vvn~Gd~l~~~TnG~~~s~~HRV~~~~~~~R~S~~~F~~p~~d~~i~p~~~~~~~~~p~~y~~~ 154 (178)
++| +|++|+|.+|++|||+||+||+||||+|||+.|||+.++.++|||++||+.|+.|++|+|+++++++++|++|+++
T Consensus 253 ~~~~~Wi~V~p~pgalVVNiGD~lq~~SNg~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~i~pl~~lv~~~~p~~Y~~~ 332 (358)
T PLN02254 253 REGVGWVTVPPVPGSLVVNVGDLLHILSNGRFPSVLHRAVVNKTRHRISVAYFYGPPSDVQISPLPKLVDPNHPPLYRSV 332 (358)
T ss_pred CCCCEEEEcccCCCCEEEEhHHHHHHHhCCeeccccceeecCCCCCEEEEEEEecCCCCcEEeCcHHhcCCCCCcccCCc
Confidence 865 8999999999999999999999999999999999999888999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHcccC
Q 030401 155 TYAEYRHIFYNRRLD 169 (178)
Q Consensus 155 ~~~d~~~~~~~~~~~ 169 (178)
+++||+..++++...
T Consensus 333 t~~ey~~~~~~~~~~ 347 (358)
T PLN02254 333 TWKEYLATKAKHFNK 347 (358)
T ss_pred CHHHHHHHHHHhhhh
Confidence 999999999877664
No 10
>PLN03178 leucoanthocyanidin dioxygenase; Provisional
Probab=100.00 E-value=9.1e-53 Score=357.26 Aligned_cols=177 Identities=32% Similarity=0.574 Sum_probs=166.8
Q ss_pred CHHHHHHHHHHHHHHCCCChhhHHHhhcC---CcceEEEeccCCCCCCCCCccccCCCCCCCeeEEeeeCCcCceEEEEC
Q 030401 1 MRKVATSLVRSMAMALELEAQEISDAYQE---GLYEVRTTLYPPCPEPERVIGITQHADYSGITLLLECGNIPGLQVLKD 77 (178)
Q Consensus 1 m~~l~~~ll~~l~~~Lgl~~~~~~~~~~~---~~~~lr~~~Yp~~~~~~~~~g~~~H~D~~~lTll~q~~~~~GLqv~~~ 77 (178)
|.+++.+|+++||++|||++++|.+.+.. ..+.+|++|||++++++..+|+++|||+|+||||+| ++++||||+++
T Consensus 177 ~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HTD~g~lTlL~q-d~v~GLQV~~~ 255 (360)
T PLN03178 177 LRSLATKLLAILSLGLGLPEDRLEKEVGGLEELLLQMKINYYPRCPQPDLALGVEAHTDVSALTFILH-NMVPGLQVLYE 255 (360)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHhcCcccchhhhheeccCCCCCCccccCcCCccCCCceEEEee-CCCCceeEeEC
Confidence 57899999999999999999999998873 357899999999998888999999999999999999 89999999999
Q ss_pred CeEEEecCCCCcEEEecchhHHHhccCcccCCCCCCCCCCCCceEEEEEeeccCCCcE-EecCccccCCCCCCCCCCccH
Q 030401 78 GQWVTVIPVDGAIVANIGHIMEIMSNGIYKAPDHRAMVNRFKERRSITTFCFPSSSVK-IGPAKEFTKSGTPPLYRTLTY 156 (178)
Q Consensus 78 g~W~~v~~~~~~~vvn~Gd~l~~~TnG~~~s~~HRV~~~~~~~R~S~~~F~~p~~d~~-i~p~~~~~~~~~p~~y~~~~~ 156 (178)
|+|++|+|.+|++|||+||+||+||||+|||++|||+.++..+|||++||+.|+.|+. +.|+++++++++|++|+|+++
T Consensus 256 g~Wi~V~p~pg~lvVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Si~~F~~P~~d~~v~~pl~~~v~~~~p~~y~p~~~ 335 (360)
T PLN03178 256 GKWVTAKCVPDSIVVHIGDTLEILSNGRYKSILHRGLVNKEKVRISWAVFCEPPKEKIILKPLPELVSKEEPPKFPPRTF 335 (360)
T ss_pred CEEEEcCCCCCeEEEEccHHHHHHhCCccccccceeecCCCCCeEEEEEEecCCcccccccCcHHHcCCCCcccCCCccH
Confidence 9999999999999999999999999999999999998887888999999999999975 599999999889999999999
Q ss_pred HHHHHHHHHcccC-cchhhhcCC
Q 030401 157 AEYRHIFYNRRLD-VSFIDMLKL 178 (178)
Q Consensus 157 ~d~~~~~~~~~~~-~~~l~~~~~ 178 (178)
+||+..++++.+. ++.++.++|
T Consensus 336 ~eyl~~~~~~~~~~~~~~~~~~~ 358 (360)
T PLN03178 336 GQHVSHKLFKKPQDERNIDAADI 358 (360)
T ss_pred HHHHHHHHhcccCcchhHhHHhc
Confidence 9999999999998 999998876
No 11
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase
Probab=100.00 E-value=3.1e-52 Score=349.08 Aligned_cols=178 Identities=31% Similarity=0.603 Sum_probs=163.5
Q ss_pred CHHHHHHHHHHHHHHCCCChhhHHHhhcC---CcceEEEeccCCCCCCCCCccccCCCCCCCeeEEeeeCCcCceEEEEC
Q 030401 1 MRKVATSLVRSMAMALELEAQEISDAYQE---GLYEVRTTLYPPCPEPERVIGITQHADYSGITLLLECGNIPGLQVLKD 77 (178)
Q Consensus 1 m~~l~~~ll~~l~~~Lgl~~~~~~~~~~~---~~~~lr~~~Yp~~~~~~~~~g~~~H~D~~~lTll~q~~~~~GLqv~~~ 77 (178)
|.+++.+|+++|+++||+++++|.+.+.. ..+.+|++||||+++++...|+++|||+|+||||+|+++++||||+++
T Consensus 124 ~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lRl~~YPp~~~~~~~~G~~~HTD~g~lTlL~qd~~v~GLQV~~~ 203 (321)
T PLN02299 124 LEKLAEELLDLLCENLGLEKGYLKKAFHGSKGPTFGTKVSNYPPCPKPDLVKGLRAHTDAGGIILLFQDDKVSGLQLLKD 203 (321)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHhcCCCCccceeeeEecCCCCCcccccCccCccCCCeEEEEEecCCCCCcCcccC
Confidence 57899999999999999999999988753 456899999999998888889999999999999999436999999999
Q ss_pred CeEEEecCCCCcEEEecchhHHHhccCcccCCCCCCCCCCCCceEEEEEeeccCCCcEEecCccccCCC--CCCCCCCcc
Q 030401 78 GQWVTVIPVDGAIVANIGHIMEIMSNGIYKAPDHRAMVNRFKERRSITTFCFPSSSVKIGPAKEFTKSG--TPPLYRTLT 155 (178)
Q Consensus 78 g~W~~v~~~~~~~vvn~Gd~l~~~TnG~~~s~~HRV~~~~~~~R~S~~~F~~p~~d~~i~p~~~~~~~~--~p~~y~~~~ 155 (178)
|+|++|+|.+|++|||+||+||+||||+|+|+.|||+.++.++|||++||+.|+.|++|+|++++++.+ +|++|+|++
T Consensus 204 g~Wi~V~p~pg~lvVNiGD~l~~~Tng~~kS~~HRVv~~~~~~R~Si~~F~~p~~d~~i~pl~~~v~~~~~~p~~y~p~~ 283 (321)
T PLN02299 204 GEWVDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVVAQTDGNRMSIASFYNPGSDAVIYPAPALVEKEAEEEQVYPKFV 283 (321)
T ss_pred CeEEECCCCCCeEEEEeCHHHHHHhCCceecccceeecCCCCCEEEEEEEecCCCCceEeCchHhcCcccCCCcCCCCCc
Confidence 999999999999999999999999999999999999988888999999999999999999999999865 589999999
Q ss_pred HHHHHHHHHHcccC-c-chhhhcCC
Q 030401 156 YAEYRHIFYNRRLD-V-SFIDMLKL 178 (178)
Q Consensus 156 ~~d~~~~~~~~~~~-~-~~l~~~~~ 178 (178)
++||++.++++..+ + ..++.+|+
T Consensus 284 ~~e~l~~~~~~~~~~~~~~~~~~~~ 308 (321)
T PLN02299 284 FEDYMKLYAGLKFQAKEPRFEAMKA 308 (321)
T ss_pred HHHHHHHHHHcccCCccchhhhhhc
Confidence 99999999998877 4 67887764
No 12
>PLN02393 leucoanthocyanidin dioxygenase like protein
Probab=100.00 E-value=4.3e-52 Score=353.29 Aligned_cols=178 Identities=36% Similarity=0.655 Sum_probs=166.6
Q ss_pred CHHHHHHHHHHHHHHCCCChhhHHHhhcCC---cceEEEeccCCCCCCCCCccccCCCCCCCeeEEeeeCCcCceEEEEC
Q 030401 1 MRKVATSLVRSMAMALELEAQEISDAYQEG---LYEVRTTLYPPCPEPERVIGITQHADYSGITLLLECGNIPGLQVLKD 77 (178)
Q Consensus 1 m~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~---~~~lr~~~Yp~~~~~~~~~g~~~H~D~~~lTll~q~~~~~GLqv~~~ 77 (178)
|.+++.+|++++|++||+++++|.+.+... .+.+|++|||++++++..+|+++|||+|+||||+|+++++||||+++
T Consensus 179 ~~~la~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lRl~~YP~~p~~~~~~g~~~HtD~g~lTlL~q~~~v~GLQV~~~ 258 (362)
T PLN02393 179 VVKLCGRLMKVLSVNLGLEEDRLQNAFGGEDGVGACLRVNYYPKCPQPDLTLGLSPHSDPGGMTILLPDDNVAGLQVRRD 258 (362)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHhCCCccccceeeeeecCCCCCcccccccccccCCceEEEEeeCCCCCcceeeEC
Confidence 578999999999999999999999988653 37999999999998888999999999999999998557999999999
Q ss_pred CeEEEecCCCCcEEEecchhHHHhccCcccCCCCCCCCCCCCceEEEEEeeccCCCcEEecCccccCCCCCCCCCCccHH
Q 030401 78 GQWVTVIPVDGAIVANIGHIMEIMSNGIYKAPDHRAMVNRFKERRSITTFCFPSSSVKIGPAKEFTKSGTPPLYRTLTYA 157 (178)
Q Consensus 78 g~W~~v~~~~~~~vvn~Gd~l~~~TnG~~~s~~HRV~~~~~~~R~S~~~F~~p~~d~~i~p~~~~~~~~~p~~y~~~~~~ 157 (178)
|+|++|+|.+|++|||+||+|++||||+|+|+.|||+.++.++|||++||+.|+.|++|.|+++++++++|++|++++++
T Consensus 259 g~W~~V~p~pgalVVNiGD~l~~~Tng~~kSt~HRVv~~~~~~R~SiafF~~P~~d~~i~pl~~~v~~~~p~~y~~~~~~ 338 (362)
T PLN02393 259 DAWITVKPVPDAFIVNIGDQIQVLSNAIYKSVEHRVIVNSAKERVSLAFFYNPKSDLPIEPLKELVTPDRPALYPPMTFD 338 (362)
T ss_pred CEEEECCCCCCeEEEEcchhhHhhcCCeeeccceecccCCCCCEEEEEEEecCCCCceEeCcHHhcCCCCCCCCCCccHH
Confidence 99999999999999999999999999999999999999888899999999999999999999999999999999999999
Q ss_pred HHHHHHHHcccC-cchhhhcCC
Q 030401 158 EYRHIFYNRRLD-VSFIDMLKL 178 (178)
Q Consensus 158 d~~~~~~~~~~~-~~~l~~~~~ 178 (178)
||+..+.++... ++.++.+|+
T Consensus 339 ey~~~~~~~~~~~~~~~~~~~~ 360 (362)
T PLN02393 339 EYRLFIRTKGPRGKSQVESLKS 360 (362)
T ss_pred HHHHHHHhcccCcchHHhhhcc
Confidence 999999988877 777888774
No 13
>PLN02997 flavonol synthase
Probab=100.00 E-value=2.4e-51 Score=344.19 Aligned_cols=165 Identities=30% Similarity=0.557 Sum_probs=156.4
Q ss_pred CHHHHHHHHHHHHHHCCCChhhHHHhhcCC--cceEEEeccCCCCCCCCCccccCCCCCCCeeEEeeeCCcCceEEEECC
Q 030401 1 MRKVATSLVRSMAMALELEAQEISDAYQEG--LYEVRTTLYPPCPEPERVIGITQHADYSGITLLLECGNIPGLQVLKDG 78 (178)
Q Consensus 1 m~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~--~~~lr~~~Yp~~~~~~~~~g~~~H~D~~~lTll~q~~~~~GLqv~~~g 78 (178)
|.+++.+|+++||++||+++++|.+.+... .+.+|++|||+++.++..+|+++|||+|+||||+| |+++||||+++|
T Consensus 150 ~~~l~~~ll~~ia~~Lgl~~~~f~~~~~~~~~~~~lRl~~YP~~~~~~~~~g~~~HTD~g~lTlL~Q-d~v~GLQV~~~g 228 (325)
T PLN02997 150 MKRLTEKILGWLSEGLGLPRETFTQSIGGETAEYVLRVNFYPPTQDTELVIGAAAHSDMGAIALLIP-NEVPGLQAFKDE 228 (325)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHhcCCcccceeeeecCCCCCCcccccCccCccCCCceEEEec-CCCCCEEEeECC
Confidence 578999999999999999999999988643 46899999999998888999999999999999999 889999999999
Q ss_pred eEEEecCCCCcEEEecchhHHHhccCcccCCCCCCCCCCCCceEEEEEeeccCCCcEEecCccccCCCCCCCCCCccHHH
Q 030401 79 QWVTVIPVDGAIVANIGHIMEIMSNGIYKAPDHRAMVNRFKERRSITTFCFPSSSVKIGPAKEFTKSGTPPLYRTLTYAE 158 (178)
Q Consensus 79 ~W~~v~~~~~~~vvn~Gd~l~~~TnG~~~s~~HRV~~~~~~~R~S~~~F~~p~~d~~i~p~~~~~~~~~p~~y~~~~~~d 158 (178)
+|++|+|.+|++|||+||+||+||||+|+|+.|||+.++..+|||++||+.|+.|+.|.|+++++++++|++|++++++|
T Consensus 229 ~Wi~V~p~pgalvVNiGD~Le~~TNG~~kSt~HRVv~~~~~~R~Si~fF~~P~~d~~i~Plp~~v~~~~p~~y~~~~~~e 308 (325)
T PLN02997 229 QWLDLNYINSAVVVIIGDQLMRMTNGRFKNVLHRAKTDKERLRISWPVFVAPRADMSVGPLPELTGDENPPKFETLIYND 308 (325)
T ss_pred cEEECCCCCCeEEEEechHHHHHhCCccccccceeeCCCCCCEEEEEEEecCCCCCeEeCChHHcCCCCCCcCCCccHHH
Confidence 99999999999999999999999999999999999988888999999999999999999999999999999999999999
Q ss_pred HHHHHHHc
Q 030401 159 YRHIFYNR 166 (178)
Q Consensus 159 ~~~~~~~~ 166 (178)
|+..+++.
T Consensus 309 ~l~~r~~~ 316 (325)
T PLN02997 309 YIDQKIRG 316 (325)
T ss_pred HHHHHHhh
Confidence 99998764
No 14
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=3.1e-51 Score=346.22 Aligned_cols=168 Identities=32% Similarity=0.637 Sum_probs=159.4
Q ss_pred CHHHHHHHHHHHHHHCCCChhhHHHhhcCCcceEEEeccCCCCCCCCCccccCCCCCCCeeEEeeeCCcCceEEEE--CC
Q 030401 1 MRKVATSLVRSMAMALELEAQEISDAYQEGLYEVRTTLYPPCPEPERVIGITQHADYSGITLLLECGNIPGLQVLK--DG 78 (178)
Q Consensus 1 m~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~H~D~~~lTll~q~~~~~GLqv~~--~g 78 (178)
|.+|+..|+++||++||+++++|.+.+.++.+.+|++||||+++++..+|+++|||+|+||||+| |+++||||+. +|
T Consensus 162 ~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lR~~~YPp~~~~~~~~g~~~HtD~g~lTlL~q-d~v~GLQV~~~~~g 240 (345)
T PLN02750 162 VEKLAFKLLELISLSLGLPADRLNGYFKDQISFARFNHYPPCPAPHLALGVGRHKDGGALTVLAQ-DDVGGLQISRRSDG 240 (345)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHhcCcceEEEEEecCCCCCcccccCcCCCCCCCeEEEEec-CCCCceEEeecCCC
Confidence 57899999999999999999999999988889999999999988878899999999999999999 7899999974 79
Q ss_pred eEEEecCCCCcEEEecchhHHHhccCcccCCCCCCCCCCCCceEEEEEeeccCCCcEEecCccccCCCCCCCCCCccHHH
Q 030401 79 QWVTVIPVDGAIVANIGHIMEIMSNGIYKAPDHRAMVNRFKERRSITTFCFPSSSVKIGPAKEFTKSGTPPLYRTLTYAE 158 (178)
Q Consensus 79 ~W~~v~~~~~~~vvn~Gd~l~~~TnG~~~s~~HRV~~~~~~~R~S~~~F~~p~~d~~i~p~~~~~~~~~p~~y~~~~~~d 158 (178)
+|++|+|.+|++|||+||+|++||||+|+|++|||+.++.++|||++||+.|+.|++|+|+++++++++|++|+|++++|
T Consensus 241 ~Wi~V~p~pg~~vVNiGD~L~~~Tng~~~St~HRVv~~~~~~R~Si~~F~~P~~d~~i~pl~~~v~~~~p~~y~p~~~~e 320 (345)
T PLN02750 241 EWIPVKPIPDAFIINIGNCMQVWTNDLYWSAEHRVVVNSQKERFSIPFFFFPSHYVNIKPLDELINEQNPPKYKEFNWGK 320 (345)
T ss_pred eEEEccCCCCeEEEEhHHHHHHHhCCeeecccceeccCCCCCEEEEEEeecCCCCCeecCcHHhcCCCCCCccCCccHHH
Confidence 99999999999999999999999999999999999988888999999999999999999999999999999999999999
Q ss_pred HHHHHHHcccC
Q 030401 159 YRHIFYNRRLD 169 (178)
Q Consensus 159 ~~~~~~~~~~~ 169 (178)
|+..++...+.
T Consensus 321 ~~~~~~~~~~~ 331 (345)
T PLN02750 321 FFASRNRSDYK 331 (345)
T ss_pred HHHHHHhcccc
Confidence 99988877553
No 15
>PLN02704 flavonol synthase
Probab=100.00 E-value=4.8e-51 Score=343.85 Aligned_cols=165 Identities=35% Similarity=0.669 Sum_probs=156.1
Q ss_pred CHHHHHHHHHHHHHHCCCChhhHHHhhcCC--cceEEEeccCCCCCCCCCccccCCCCCCCeeEEeeeCCcCceEEEECC
Q 030401 1 MRKVATSLVRSMAMALELEAQEISDAYQEG--LYEVRTTLYPPCPEPERVIGITQHADYSGITLLLECGNIPGLQVLKDG 78 (178)
Q Consensus 1 m~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~--~~~lr~~~Yp~~~~~~~~~g~~~H~D~~~lTll~q~~~~~GLqv~~~g 78 (178)
|.+++.+|+++++++||+++++|.+.+... .+.+|++|||++++++..+|+++|||+|+||||+| ++++||||+++|
T Consensus 166 ~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HtD~g~lTlL~q-d~v~GLQV~~~g 244 (335)
T PLN02704 166 LRGVADKLFKTLSLGLGLEEDELKEAVGGEELEYLLKINYYPPCPRPDLALGVVAHTDMSAITILVP-NEVQGLQVFRDD 244 (335)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHhcCCchhhhhhhhcCCCCCCcccccCccCccCCcceEEEec-CCCCceeEeECC
Confidence 578999999999999999999999887643 46899999999998888999999999999999999 889999999999
Q ss_pred eEEEecCCCCcEEEecchhHHHhccCcccCCCCCCCCCCCCceEEEEEeeccCCCcEEecCccccCCCCCCCCCCccHHH
Q 030401 79 QWVTVIPVDGAIVANIGHIMEIMSNGIYKAPDHRAMVNRFKERRSITTFCFPSSSVKIGPAKEFTKSGTPPLYRTLTYAE 158 (178)
Q Consensus 79 ~W~~v~~~~~~~vvn~Gd~l~~~TnG~~~s~~HRV~~~~~~~R~S~~~F~~p~~d~~i~p~~~~~~~~~p~~y~~~~~~d 158 (178)
+|++|+|.+|++|||+||+||+||||+|||+.|||+.++..+|||++||+.|+.|++|.|+++++++++|++|++++++|
T Consensus 245 ~Wi~V~p~pg~lvVNvGD~L~~~TNg~~kSt~HRVv~~~~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~p~~Y~~~~~~e 324 (335)
T PLN02704 245 HWFDVKYIPNALVIHIGDQIEILSNGKYKSVLHRTTVNKEKTRMSWPVFLEPPSELAVGPLPKLINEDNPPKFKTKKFKD 324 (335)
T ss_pred EEEeCCCCCCeEEEEechHHHHHhCCeeecccceeecCCCCCeEEEEEEecCCCCceEeCChHhcCCCCCccCCCCCHHH
Confidence 99999999999999999999999999999999999988888999999999999999999999999999999999999999
Q ss_pred HHHHHHHc
Q 030401 159 YRHIFYNR 166 (178)
Q Consensus 159 ~~~~~~~~ 166 (178)
|+..+++.
T Consensus 325 ~~~~~~~~ 332 (335)
T PLN02704 325 YVYCKLNK 332 (335)
T ss_pred HHHHHHhc
Confidence 99988773
No 16
>PLN02365 2-oxoglutarate-dependent dioxygenase
Probab=100.00 E-value=1.2e-50 Score=336.93 Aligned_cols=172 Identities=27% Similarity=0.459 Sum_probs=159.3
Q ss_pred CHHHHHHHHHHHHHHCCC-ChhhHHHhhcCCcceEEEeccCCCCCCCCCccccCCCCCCCeeEEeeeC-CcCceEEEE--
Q 030401 1 MRKVATSLVRSMAMALEL-EAQEISDAYQEGLYEVRTTLYPPCPEPERVIGITQHADYSGITLLLECG-NIPGLQVLK-- 76 (178)
Q Consensus 1 m~~l~~~ll~~l~~~Lgl-~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~H~D~~~lTll~q~~-~~~GLqv~~-- 76 (178)
|.+++.+|+++||++||| ++++|.+. .+.+|++|||+++.++...|+++|||+|+||||+| + +++||||++
T Consensus 121 ~~~l~~~ll~~la~~Lgl~~~~~f~~~----~~~lr~~~YP~~p~~~~~~g~~~HtD~g~lTlL~q-d~~~~GLqV~~~~ 195 (300)
T PLN02365 121 IHDLAMDLARKLAESLGLVEGDFFQGW----PSQFRINKYNFTPETVGSSGVQIHTDSGFLTILQD-DENVGGLEVMDPS 195 (300)
T ss_pred HHHHHHHHHHHHHHHcCCCChHHHhhc----ccceeeeecCCCCCccccccccCccCCCceEEEec-CCCcCceEEEECC
Confidence 578999999999999999 88888764 47899999999988888899999999999999999 5 599999986
Q ss_pred CCeEEEecCCCCcEEEecchhHHHhccCcccCCCCCCCCCCCCceEEEEEeeccCCCcEEecCccccCCCCCCCCCCccH
Q 030401 77 DGQWVTVIPVDGAIVANIGHIMEIMSNGIYKAPDHRAMVNRFKERRSITTFCFPSSSVKIGPAKEFTKSGTPPLYRTLTY 156 (178)
Q Consensus 77 ~g~W~~v~~~~~~~vvn~Gd~l~~~TnG~~~s~~HRV~~~~~~~R~S~~~F~~p~~d~~i~p~~~~~~~~~p~~y~~~~~ 156 (178)
+|+|++|+|.+|++|||+||+||+||||+|+|+.|||+.++..+|||++||+.|+.|++|.|+++++++++|++|+++++
T Consensus 196 ~g~Wi~V~p~pga~vVNiGD~l~~~TNG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~p~~~~v~~~~p~~y~~~~~ 275 (300)
T PLN02365 196 SGEFVPVDPLPGTLLVNLGDVATAWSNGRLCNVKHRVQCKEATMRISIASFLLGPKDDDVEAPPEFVDAEHPRLYKPFTY 275 (300)
T ss_pred CCeEEecCCCCCeEEEEhhHHHHHHhCCceecccceeEcCCCCCEEEEEEEecCCCCCeEeCCHHHcCCCCCccCCCccH
Confidence 68999999999999999999999999999999999999888789999999999999999999999999889999999999
Q ss_pred HHHHHHHHHcccC-cchhhhcC
Q 030401 157 AEYRHIFYNRRLD-VSFIDMLK 177 (178)
Q Consensus 157 ~d~~~~~~~~~~~-~~~l~~~~ 177 (178)
+||+..+.++... ...++.++
T Consensus 276 ~e~~~~~~~~~~~~~~~~~~~~ 297 (300)
T PLN02365 276 EDYRKLRLSTKLHAGEALALIT 297 (300)
T ss_pred HHHHHHHHhccccccchHhhhh
Confidence 9999999998887 77776553
No 17
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase
Probab=100.00 E-value=2.3e-50 Score=342.06 Aligned_cols=167 Identities=35% Similarity=0.589 Sum_probs=155.4
Q ss_pred CHHHHHHHHHHHHHHCCCChhhHHHhhcCCcceEEEeccCCCCCCCCCccccCCCCCCCeeEEeeeCCcCceEEEECC--
Q 030401 1 MRKVATSLVRSMAMALELEAQEISDAYQEGLYEVRTTLYPPCPEPERVIGITQHADYSGITLLLECGNIPGLQVLKDG-- 78 (178)
Q Consensus 1 m~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~H~D~~~lTll~q~~~~~GLqv~~~g-- 78 (178)
|.+|+.+|+++++++||+++++|.+.+....+.+|++|||+++.++..+|+++|||+|+||||+| |+++||||++++
T Consensus 164 ~~~L~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~G~~~HTD~g~lTlL~Q-d~v~GLQV~~~~~~ 242 (358)
T PLN02515 164 LMGLACKLLEVLSEAMGLEKEALTKACVDMDQKVVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATRDGGK 242 (358)
T ss_pred HHHHHHHHHHHHHHhcCCChhhHHHhhcCccceEEEeecCCCCChhhccCCCCCCCCCeEEEEec-CCCCceEEEECCCC
Confidence 56899999999999999999999999887788999999999988888999999999999999999 889999998743
Q ss_pred eEEEecCCCCcEEEecchhHHHhccCcccCCCCCCCCCCCCceEEEEEeeccCCCcEEecCccccCCCCCCCCCCccHHH
Q 030401 79 QWVTVIPVDGAIVANIGHIMEIMSNGIYKAPDHRAMVNRFKERRSITTFCFPSSSVKIGPAKEFTKSGTPPLYRTLTYAE 158 (178)
Q Consensus 79 ~W~~v~~~~~~~vvn~Gd~l~~~TnG~~~s~~HRV~~~~~~~R~S~~~F~~p~~d~~i~p~~~~~~~~~p~~y~~~~~~d 158 (178)
+|++|+|.||++|||+||+||+||||+|+|++|||+.++..+|||++||+.|+.|++|+|++ ++.+++|++|++++++|
T Consensus 243 ~Wi~Vpp~pgalVVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Si~~F~~P~~d~~i~Pl~-~~~~~~p~~y~~~t~~e 321 (358)
T PLN02515 243 TWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNCSRLSIATFQNPAPDATVYPLK-VREGEKPILEEPITFAE 321 (358)
T ss_pred eEEECCCCCCeEEEEccHHHHHHhCCeeeeecceEECCCCCCEEEEEEEecCCCCCEEECCC-cCCCCCCCcCCCcCHHH
Confidence 79999999999999999999999999999999999988888999999999999999999997 55667899999999999
Q ss_pred HHHHHHHcccC
Q 030401 159 YRHIFYNRRLD 169 (178)
Q Consensus 159 ~~~~~~~~~~~ 169 (178)
|+..++++.+.
T Consensus 322 yl~~~~~~~~~ 332 (358)
T PLN02515 322 MYRRKMSRDLE 332 (358)
T ss_pred HHHHHHhcccc
Confidence 99999887654
No 18
>PLN02156 gibberellin 2-beta-dioxygenase
Probab=100.00 E-value=2.8e-50 Score=338.73 Aligned_cols=168 Identities=29% Similarity=0.494 Sum_probs=155.2
Q ss_pred CHHHHHHHHHHHHHHCCCC-hhhHHHhhc--CCcceEEEeccCCCCCC--CCCccccCCCCCCCeeEEeeeCCcCceEEE
Q 030401 1 MRKVATSLVRSMAMALELE-AQEISDAYQ--EGLYEVRTTLYPPCPEP--ERVIGITQHADYSGITLLLECGNIPGLQVL 75 (178)
Q Consensus 1 m~~l~~~ll~~l~~~Lgl~-~~~~~~~~~--~~~~~lr~~~Yp~~~~~--~~~~g~~~H~D~~~lTll~q~~~~~GLqv~ 75 (178)
|.+++.+|+++||++||++ +++|.+++. ...+.+|++|||++++. +..+|+++|||+|+||||+| |+++||||+
T Consensus 144 ~~~L~~~ll~~la~~LGl~~~~~f~~~~~~~~~~~~lRl~~YP~~~~~~~~~~~g~~~HTD~g~lTlL~Q-d~v~GLQV~ 222 (335)
T PLN02156 144 MKRMSSKVLEMVEEELKIEPKEKLSKLVKVKESDSCLRMNHYPEKEETPEKVEIGFGEHTDPQLISLLRS-NDTAGLQIC 222 (335)
T ss_pred HHHHHHHHHHHHHHHcCcCcHHHHHHHhcCCCccceEeEEeCCCCCCCccccccCCCCccCCCceEEEEe-CCCCceEEE
Confidence 5789999999999999997 478988875 34689999999999753 25789999999999999999 789999998
Q ss_pred -ECCeEEEecCCCCcEEEecchhHHHhccCcccCCCCCCCCCCCCceEEEEEeeccCCCcEEecCccccCCCCCCCCCCc
Q 030401 76 -KDGQWVTVIPVDGAIVANIGHIMEIMSNGIYKAPDHRAMVNRFKERRSITTFCFPSSSVKIGPAKEFTKSGTPPLYRTL 154 (178)
Q Consensus 76 -~~g~W~~v~~~~~~~vvn~Gd~l~~~TnG~~~s~~HRV~~~~~~~R~S~~~F~~p~~d~~i~p~~~~~~~~~p~~y~~~ 154 (178)
++|+|++|+|.+|++|||+||+||+||||+|+|+.|||+.+..++|||++||+.|+.|++|+|+++++++++|++|+|+
T Consensus 223 ~~~g~Wi~Vpp~pga~VVNiGD~l~~wTNg~~kSt~HRVv~~~~~~R~SiafF~~P~~d~~i~pl~~~v~~~~p~~y~p~ 302 (335)
T PLN02156 223 VKDGTWVDVPPDHSSFFVLVGDTLQVMTNGRFKSVKHRVVTNTKRSRISMIYFAGPPLSEKIAPLSCLVPKQDDCLYNEF 302 (335)
T ss_pred eCCCCEEEccCCCCcEEEEhHHHHHHHhCCeeeccceeeecCCCCCEEEEEEeecCCCCCEEeCChHhcCCCCCccCCCc
Confidence 5899999999999999999999999999999999999998888899999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHcccC
Q 030401 155 TYAEYRHIFYNRRLD 169 (178)
Q Consensus 155 ~~~d~~~~~~~~~~~ 169 (178)
+++||+..++++.+.
T Consensus 303 ~~~ey~~~~~~~~~~ 317 (335)
T PLN02156 303 TWSQYKLSAYKTKLG 317 (335)
T ss_pred cHHHHHHHHHhccCC
Confidence 999999999987654
No 19
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=2.3e-50 Score=341.04 Aligned_cols=173 Identities=42% Similarity=0.731 Sum_probs=155.5
Q ss_pred CHHHHHHHHHHHHHHCCCChhhHHHhhcCC-cceEEEeccCCCCCCCCCccccCCCCCCCeeEEeeeCCcCceEEEECCe
Q 030401 1 MRKVATSLVRSMAMALELEAQEISDAYQEG-LYEVRTTLYPPCPEPERVIGITQHADYSGITLLLECGNIPGLQVLKDGQ 79 (178)
Q Consensus 1 m~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~-~~~lr~~~Yp~~~~~~~~~g~~~H~D~~~lTll~q~~~~~GLqv~~~g~ 79 (178)
|.+++.+|++++|++|||++++|.+.+... .+.+|++||||++.++..+|+++|||+|+||||+|+++++||||+++|+
T Consensus 171 ~~~l~~~ll~~la~~LGl~~~~f~~~~~~~~~~~lRl~~YPp~~~~~~~~g~~~HTD~g~lTlL~qd~~v~GLQV~~~g~ 250 (348)
T PLN00417 171 QRLVIEKFFKAMARSLELEENCFLEMYGENATMDTRFNMYPPCPRPDKVIGVKPHADGSAFTLLLPDKDVEGLQFLKDGK 250 (348)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHhccCccceeeeeecCCCCCcccccCCcCccCCCceEEEEecCCCCceeEeECCe
Confidence 468999999999999999999999988654 5679999999999888889999999999999999944699999999999
Q ss_pred EEEecCCCCcEEEecchhHHHhccCcccCCCCCCCCCCCCceEEEEEeeccCCCcEEecCccccCCCCCCCCCCccHHHH
Q 030401 80 WVTVIPVDGAIVANIGHIMEIMSNGIYKAPDHRAMVNRFKERRSITTFCFPSSSVKIGPAKEFTKSGTPPLYRTLTYAEY 159 (178)
Q Consensus 80 W~~v~~~~~~~vvn~Gd~l~~~TnG~~~s~~HRV~~~~~~~R~S~~~F~~p~~d~~i~p~~~~~~~~~p~~y~~~~~~d~ 159 (178)
|++|+|.+|++|||+||+||+||||+|+|++|||+.++..+|||++||+.|+.|++|+|+++++++++|++|++++ +|
T Consensus 251 Wi~V~p~pg~lVVNiGD~Le~~Tng~~kSt~HRVv~~~~~~R~Si~fF~~P~~d~~i~pl~~~v~~~~p~~Y~~~~--~~ 328 (348)
T PLN00417 251 WYKAPIVPDTILINVGDQMEIMSNGIYKSPVHRVVTNREKERISVATFCIPGADKEIQPVDGLVSEARPRLYKTVK--KY 328 (348)
T ss_pred EEECCCCCCcEEEEcChHHHHHhCCeecccceEEecCCCCCEEEEEEEecCCCCceecCchHhcCCCCCCCCCCHH--HH
Confidence 9999999999999999999999999999999999988888999999999999999999999999998999999999 55
Q ss_pred HHHHHHcccC-cchhhh
Q 030401 160 RHIFYNRRLD-VSFIDM 175 (178)
Q Consensus 160 ~~~~~~~~~~-~~~l~~ 175 (178)
+...++.... ++.|+.
T Consensus 329 ~~~~~~~~~~~~~~~~~ 345 (348)
T PLN00417 329 VELFFKYYQQGRRPIEA 345 (348)
T ss_pred HHHHHHHHhcCcchhhh
Confidence 5555554444 555654
No 20
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=3.3e-50 Score=338.31 Aligned_cols=167 Identities=26% Similarity=0.443 Sum_probs=154.1
Q ss_pred CHHHHHHHHHHHHHHCCCChhhHHH--hhcCCcceEEEeccCCCCCCC-CCccccCCCCCCCeeEEeeeCCcCceEEEEC
Q 030401 1 MRKVATSLVRSMAMALELEAQEISD--AYQEGLYEVRTTLYPPCPEPE-RVIGITQHADYSGITLLLECGNIPGLQVLKD 77 (178)
Q Consensus 1 m~~l~~~ll~~l~~~Lgl~~~~~~~--~~~~~~~~lr~~~Yp~~~~~~-~~~g~~~H~D~~~lTll~q~~~~~GLqv~~~ 77 (178)
|.+|+..|+++||++|||++++|.+ .++.+.+.||++|||++++++ ..+|+++|||+|+||||+| |+++||||+++
T Consensus 149 ~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~lrl~~YP~~~~~~~~~~g~~~HTD~g~lTlL~q-d~v~GLQV~~~ 227 (332)
T PLN03002 149 ALRVSMAIAKLLALALDLDVGYFDRTEMLGKPIATMRLLRYQGISDPSKGIYACGAHSDFGMMTLLAT-DGVMGLQICKD 227 (332)
T ss_pred HHHHHHHHHHHHHHHcCCChHHhccccccCCCchheeeeeCCCCCCcccCccccccccCCCeEEEEee-CCCCceEEecC
Confidence 5789999999999999999999986 456667899999999998765 5789999999999999999 88999999863
Q ss_pred -----CeEEEecCCCCcEEEecchhHHHhccCcccCCCCCCCCCCCCceEEEEEeeccCCCcEEecCccccCCCCCCCCC
Q 030401 78 -----GQWVTVIPVDGAIVANIGHIMEIMSNGIYKAPDHRAMVNRFKERRSITTFCFPSSSVKIGPAKEFTKSGTPPLYR 152 (178)
Q Consensus 78 -----g~W~~v~~~~~~~vvn~Gd~l~~~TnG~~~s~~HRV~~~~~~~R~S~~~F~~p~~d~~i~p~~~~~~~~~p~~y~ 152 (178)
|+|++|+|.||++|||+||+|++||||+|+|+.|||+.+. .+|||++||+.|+.|++|.|+++++++++|++|+
T Consensus 228 ~~~~~g~Wi~Vpp~pg~~VVNiGD~L~~wTng~~kSt~HRVv~~~-~~R~Sia~F~~p~~d~~i~pl~~~~~~~~p~~y~ 306 (332)
T PLN03002 228 KNAMPQKWEYVPPIKGAFIVNLGDMLERWSNGFFKSTLHRVLGNG-QERYSIPFFVEPNHDCLVECLPTCKSESDLPKYP 306 (332)
T ss_pred CCCCCCcEEECCCCCCeEEEEHHHHHHHHhCCeeECcCCeecCCC-CCeeEEEEEecCCCCeeEecCCcccCCCCcccCC
Confidence 6899999999999999999999999999999999999765 5799999999999999999999999999999999
Q ss_pred CccHHHHHHHHHHcccC
Q 030401 153 TLTYAEYRHIFYNRRLD 169 (178)
Q Consensus 153 ~~~~~d~~~~~~~~~~~ 169 (178)
|++++||+..++...+.
T Consensus 307 ~~~~~e~l~~~~~~~~~ 323 (332)
T PLN03002 307 PIKCSTYLTQRYEETHA 323 (332)
T ss_pred CccHHHHHHHHHHHHhh
Confidence 99999999999887654
No 21
>PTZ00273 oxidase reductase; Provisional
Probab=100.00 E-value=5.2e-50 Score=335.67 Aligned_cols=167 Identities=31% Similarity=0.532 Sum_probs=156.6
Q ss_pred CHHHHHHHHHHHHHHCCCChhhHHHhhcCCcceEEEeccCCCCCC-CCCccccCCCCCCCeeEEeeeCCcCceEEEE-CC
Q 030401 1 MRKVATSLVRSMAMALELEAQEISDAYQEGLYEVRTTLYPPCPEP-ERVIGITQHADYSGITLLLECGNIPGLQVLK-DG 78 (178)
Q Consensus 1 m~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~lr~~~Yp~~~~~-~~~~g~~~H~D~~~lTll~q~~~~~GLqv~~-~g 78 (178)
|.+++.+|++++|++||+++++|.+.+..+.+.+|++|||+++++ +..+|+++|||+|+||+|+| |.++||||+. +|
T Consensus 146 ~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~~g~~~HTD~g~lTlL~q-d~~~GLqV~~~~g 224 (320)
T PTZ00273 146 MQALALVLLRALALAIGLREDFFDSKFMEPLSVFRMKHYPALPQTKKGRTVCGEHTDYGIITLLYQ-DSVGGLQVRNLSG 224 (320)
T ss_pred HHHHHHHHHHHHHHHhCcCHHHHHHhhCCCcceeeeeecCCCCCccccCcccccccCCCeEEEEec-CCCCceEEECCCC
Confidence 568999999999999999999999999888899999999999864 46889999999999999999 7899999996 89
Q ss_pred eEEEecCCCCcEEEecchhHHHhccCcccCCCCCCCCCCCCceEEEEEeeccCCCcEEecCccccCCCCCCCCCCccHHH
Q 030401 79 QWVTVIPVDGAIVANIGHIMEIMSNGIYKAPDHRAMVNRFKERRSITTFCFPSSSVKIGPAKEFTKSGTPPLYRTLTYAE 158 (178)
Q Consensus 79 ~W~~v~~~~~~~vvn~Gd~l~~~TnG~~~s~~HRV~~~~~~~R~S~~~F~~p~~d~~i~p~~~~~~~~~p~~y~~~~~~d 158 (178)
+|++|+|.+|++|||+||+|++||||+|+|++|||+.+ ..+|+|++||+.|+.|++|.|+++++++++|++|+|++++|
T Consensus 225 ~Wi~V~p~pg~lvVNvGD~l~~~TnG~~kSt~HRVv~~-~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~~~y~~~~~~e 303 (320)
T PTZ00273 225 EWMDVPPLEGSFVVNIGDMMEMWSNGRYRSTPHRVVNT-GVERYSMPFFCEPNPNVIIKCLDNCHSEENPPKYPPVRAVD 303 (320)
T ss_pred CEEeCCCCCCeEEEEHHHHHHHHHCCeeeCCCccccCC-CCCeEEEEEEEcCCCCceEecCccccCCCCcccCCceeHHH
Confidence 99999999999999999999999999999999999854 57899999999999999999999999999999999999999
Q ss_pred HHHHHHHcccC
Q 030401 159 YRHIFYNRRLD 169 (178)
Q Consensus 159 ~~~~~~~~~~~ 169 (178)
|+..++.+.+.
T Consensus 304 ~~~~~~~~~~~ 314 (320)
T PTZ00273 304 WLLKRFAETYA 314 (320)
T ss_pred HHHHHHHHHHH
Confidence 99999887664
No 22
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=100.00 E-value=1.1e-49 Score=333.40 Aligned_cols=174 Identities=39% Similarity=0.756 Sum_probs=161.5
Q ss_pred CHHHHHHHHHHHHHHCCCChhhHHHhhcC-CcceEEEeccCCCCCCCCCccccCCCCCCCeeEEeeeCCcCceEEE-ECC
Q 030401 1 MRKVATSLVRSMAMALELEAQEISDAYQE-GLYEVRTTLYPPCPEPERVIGITQHADYSGITLLLECGNIPGLQVL-KDG 78 (178)
Q Consensus 1 m~~l~~~ll~~l~~~Lgl~~~~~~~~~~~-~~~~lr~~~Yp~~~~~~~~~g~~~H~D~~~lTll~q~~~~~GLqv~-~~g 78 (178)
|.+++..|+++++++||++++++.+.++. +...+|+||||||++|+..+|+++|||.++||+|+|++.++||||+ ++|
T Consensus 144 ~~~L~~~l~~~l~eslgl~~~~~~~~~~~~~~~~~r~n~Yp~cp~pe~~lGl~~HtD~~~lTiLlqd~~V~GLQv~~~dg 223 (322)
T KOG0143|consen 144 VMELSEKLLRLLSESLGLEPEYLEKLFGETGGQVMRLNYYPPCPEPELTLGLGAHTDKSFLTILLQDDDVGGLQVFTKDG 223 (322)
T ss_pred HHHHHHHHHHHHHHHcCCChHHHHHhhCCccceEEEEeecCCCcCccccccccCccCcCceEEEEccCCcCceEEEecCC
Confidence 46899999999999999998777788776 4679999999999999999999999999999999995589999999 599
Q ss_pred eEEEecCCCCcEEEecchhHHHhccCcccCCCCCCCCCCCCceEEEEEeeccCCCcEEecCccccCCCCCCCCCCccHHH
Q 030401 79 QWVTVIPVDGAIVANIGHIMEIMSNGIYKAPDHRAMVNRFKERRSITTFCFPSSSVKIGPAKEFTKSGTPPLYRTLTYAE 158 (178)
Q Consensus 79 ~W~~v~~~~~~~vvn~Gd~l~~~TnG~~~s~~HRV~~~~~~~R~S~~~F~~p~~d~~i~p~~~~~~~~~p~~y~~~~~~d 158 (178)
.|++|+|.|+++|||+||+||+||||+|||+.|||++++.++|+|+|+|+.|+.|++|.|++++++.. |++|+++++.+
T Consensus 224 ~Wi~V~P~p~a~vVNiGD~l~~lSNG~ykSv~HRV~~n~~~~R~Sia~F~~p~~d~~i~p~~elv~~~-~~~Y~~~~~~~ 302 (322)
T KOG0143|consen 224 KWIDVPPIPGAFVVNIGDMLQILSNGRYKSVLHRVVVNGEKERISVAFFVFPPLDKVIGPPEELVDEE-PPKYKPFTFGD 302 (322)
T ss_pred eEEECCCCCCCEEEEcccHHhHhhCCcccceEEEEEeCCCCceEEEEEEecCCCCceecChhhhCCCC-CCccCcEEHHH
Confidence 99999999999999999999999999999999999999988899999999999999999999998877 77899999999
Q ss_pred HHHHHHHcccC-cchhhh
Q 030401 159 YRHIFYNRRLD-VSFIDM 175 (178)
Q Consensus 159 ~~~~~~~~~~~-~~~l~~ 175 (178)
|++...++... +..++.
T Consensus 303 y~~~~~~~~~~~~~~~~~ 320 (322)
T KOG0143|consen 303 YLEFYFSKKLQGKTLLDY 320 (322)
T ss_pred HHHHHHhccccCcchhhh
Confidence 99999998877 665553
No 23
>PLN02485 oxidoreductase
Probab=100.00 E-value=1.4e-49 Score=334.33 Aligned_cols=168 Identities=27% Similarity=0.468 Sum_probs=153.7
Q ss_pred CHHHHHHHHHHHHHHCCCChhhHHHhh-cCCcceEEEeccCCCCC----CCCCccccCCCCCCCeeEEeeeCCcCceEEE
Q 030401 1 MRKVATSLVRSMAMALELEAQEISDAY-QEGLYEVRTTLYPPCPE----PERVIGITQHADYSGITLLLECGNIPGLQVL 75 (178)
Q Consensus 1 m~~l~~~ll~~l~~~Lgl~~~~~~~~~-~~~~~~lr~~~Yp~~~~----~~~~~g~~~H~D~~~lTll~q~~~~~GLqv~ 75 (178)
|.+++.+|++++|++||+++++|.+.+ ..+.+.+|++|||+++. ++..+|+++|||+|+||||+|+++++||||+
T Consensus 152 ~~~l~~~ll~~~a~~Lgl~~~~f~~~~~~~~~~~lrl~~YP~~~~~~~~~~~~~g~~~HTD~g~lTlL~qd~~~~GLqV~ 231 (329)
T PLN02485 152 CTDLSRKILRGIALALGGSPDEFEGKMAGDPFWVMRIIGYPGVSNLNGPPENDIGCGAHTDYGLLTLVNQDDDITALQVR 231 (329)
T ss_pred HHHHHHHHHHHHHHHcCCChHHhhhhhccCccceEEEEeCCCCccccCCcccCcccccccCCCeEEEEeccCCCCeeeEE
Confidence 578999999999999999999998765 45678899999999975 4568999999999999999994468999999
Q ss_pred E-CCeEEEecCCCCcEEEecchhHHHhccCcccCCCCCCCCCCCCceEEEEEeeccCCCcEEecCccccC--CCCCCCCC
Q 030401 76 K-DGQWVTVIPVDGAIVANIGHIMEIMSNGIYKAPDHRAMVNRFKERRSITTFCFPSSSVKIGPAKEFTK--SGTPPLYR 152 (178)
Q Consensus 76 ~-~g~W~~v~~~~~~~vvn~Gd~l~~~TnG~~~s~~HRV~~~~~~~R~S~~~F~~p~~d~~i~p~~~~~~--~~~p~~y~ 152 (178)
. +|+|++|+|.+|++|||+||+|++||||+|+|++|||+.++..+|||++||++|+.|++|.|++++++ .++|++|+
T Consensus 232 ~~~g~Wi~V~p~pg~~vVNiGD~L~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~~~~~y~ 311 (329)
T PLN02485 232 NLSGEWIWAIPIPGTFVCNIGDMLKIWSNGVYQSTLHRVINNSPKYRVCVAFFYETNFDAAVEPLDICKEKRTGGSQVFK 311 (329)
T ss_pred cCCCcEEECCCCCCcEEEEhHHHHHHHHCCEeeCCCceecCCCCCCeEEEEEEecCCCCceeecchhhcccccCCCCCCC
Confidence 5 89999999999999999999999999999999999999888889999999999999999999999987 66789999
Q ss_pred CccHHHHHHHHHHccc
Q 030401 153 TLTYAEYRHIFYNRRL 168 (178)
Q Consensus 153 ~~~~~d~~~~~~~~~~ 168 (178)
+++++||+..++.+.+
T Consensus 312 ~~t~~e~~~~~~~~~~ 327 (329)
T PLN02485 312 RVVYGEHLVNKVLTNF 327 (329)
T ss_pred cEeHHHHHHHHHHHhh
Confidence 9999999999987654
No 24
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=3e-49 Score=333.24 Aligned_cols=167 Identities=30% Similarity=0.513 Sum_probs=153.6
Q ss_pred CHHHHHHHHHHHHHHCCCC--hhhHHHhhcCCcceEEEeccCCCCCCCCCccccCCCCCCCeeEEeeeCCcCceEEEECC
Q 030401 1 MRKVATSLVRSMAMALELE--AQEISDAYQEGLYEVRTTLYPPCPEPERVIGITQHADYSGITLLLECGNIPGLQVLKDG 78 (178)
Q Consensus 1 m~~l~~~ll~~l~~~Lgl~--~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~H~D~~~lTll~q~~~~~GLqv~~~g 78 (178)
|.+|+..|+++||++||++ +++|.+.+..+.+.+|++||||++.++..+|+++|||+|+||||+| ++++||||+++|
T Consensus 167 ~~~La~~ll~~lA~~Lgl~~~~~~f~~~~~~~~~~lRl~~YPp~~~~~~~~g~~aHTD~g~lTlL~Q-d~v~GLQV~~~g 245 (341)
T PLN02984 167 LTRIAVTLFEAIAKTLSLELSGDQKMSYLSESTGVIRVYRYPQCSNEAEAPGMEVHTDSSVISILNQ-DEVGGLEVMKDG 245 (341)
T ss_pred HHHHHHHHHHHHHHHcCCCcchhHHHHHhcCccceEEEEeCCCCCCcccccCccCccCCCceEEEEe-CCCCCeeEeeCC
Confidence 5789999999999999999 9999999988888999999999988878899999999999999999 889999999999
Q ss_pred eEEEecCCCCcEEEecchhHHHhccCcccCCCCCCC-CCCCCceEEEEEeeccCCCcEEecCccccCCCCCCCCCCccHH
Q 030401 79 QWVTVIPVDGAIVANIGHIMEIMSNGIYKAPDHRAM-VNRFKERRSITTFCFPSSSVKIGPAKEFTKSGTPPLYRTLTYA 157 (178)
Q Consensus 79 ~W~~v~~~~~~~vvn~Gd~l~~~TnG~~~s~~HRV~-~~~~~~R~S~~~F~~p~~d~~i~p~~~~~~~~~p~~y~~~~~~ 157 (178)
+|++|+|.||++|||+||+||+||||+|||+.|||+ .++.++|||++||++|+.|++|. |++|+|++++
T Consensus 246 ~Wv~V~p~pgalVVNiGD~Le~wTNg~~kSt~HRVv~~~~~~~R~Sia~F~~P~~d~~i~----------p~~y~p~t~~ 315 (341)
T PLN02984 246 EWFNVKPIANTLVVNLGDMMQVISDDEYKSVLHRVGKRNKKKERYSICYFVFPEEDCVIK----------SSKYKPFTYS 315 (341)
T ss_pred ceEECCCCCCeEEEECChhhhhhcCCeeeCCCCccccCCCCCCeEEEEEEecCCCCCEEc----------cCCcCcccHH
Confidence 999999999999999999999999999999999995 45678899999999999999996 3689999999
Q ss_pred HHHHHHHHcccC-cch--hhhcCC
Q 030401 158 EYRHIFYNRRLD-VSF--IDMLKL 178 (178)
Q Consensus 158 d~~~~~~~~~~~-~~~--l~~~~~ 178 (178)
||+..++..+.. ++. ++.+||
T Consensus 316 e~l~~~~~~~~~~~~~~~~~~~~~ 339 (341)
T PLN02984 316 DFEAQVQLDVKTLGSKVGLSRFKS 339 (341)
T ss_pred HHHHHHHhhhhccCCcccccceec
Confidence 999999876654 333 788775
No 25
>PLN02403 aminocyclopropanecarboxylate oxidase
Probab=100.00 E-value=7.5e-49 Score=326.21 Aligned_cols=171 Identities=33% Similarity=0.614 Sum_probs=153.4
Q ss_pred CHHHHHHHHHHHHHHCCCChhhHHHhhc---CCcceEEEeccCCCCCCCCCccccCCCCCCCeeEEeeeCCcCceEEEEC
Q 030401 1 MRKVATSLVRSMAMALELEAQEISDAYQ---EGLYEVRTTLYPPCPEPERVIGITQHADYSGITLLLECGNIPGLQVLKD 77 (178)
Q Consensus 1 m~~l~~~ll~~l~~~Lgl~~~~~~~~~~---~~~~~lr~~~Yp~~~~~~~~~g~~~H~D~~~lTll~q~~~~~GLqv~~~ 77 (178)
|.+++.+|+++++++||+++++|.+.+. .+.+.+|++|||++++++...|+++|||+|+||+|+|++.++||||+++
T Consensus 119 ~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YP~~~~~~~~~G~~~HtD~g~lTlL~q~~~v~GLqV~~~ 198 (303)
T PLN02403 119 LIKLAEKLSELMSENLGLDKDYIKEAFSGNKGPSVGTKVAKYPECPRPELVRGLREHTDAGGIILLLQDDQVPGLEFLKD 198 (303)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHhccCCCccceeeeEcCCCCCCcccccCccCccCCCeEEEEEecCCCCceEeccC
Confidence 5789999999999999999999998886 3345799999999988877889999999999999999435999999999
Q ss_pred CeEEEecCCC-CcEEEecchhHHHhccCcccCCCCCCCCCCCCceEEEEEeeccCCCcEEecCccccCCCCCCCCC-Ccc
Q 030401 78 GQWVTVIPVD-GAIVANIGHIMEIMSNGIYKAPDHRAMVNRFKERRSITTFCFPSSSVKIGPAKEFTKSGTPPLYR-TLT 155 (178)
Q Consensus 78 g~W~~v~~~~-~~~vvn~Gd~l~~~TnG~~~s~~HRV~~~~~~~R~S~~~F~~p~~d~~i~p~~~~~~~~~p~~y~-~~~ 155 (178)
|+|++|+|.+ +++|||+||+||+||||+|+|+.|||+.+..++|||++||+.|+.|++|.|+++++ |+ +++
T Consensus 199 g~Wi~V~p~p~~~lvVNvGD~L~~~Tng~~~S~~HRVv~~~~~~R~Si~~F~~p~~d~~i~pl~~~~-------~~~~~~ 271 (303)
T PLN02403 199 GKWVPIPPSKNNTIFVNTGDQLEVLSNGRYKSTLHRVMADKNGSRLSIATFYNPAGDAIISPAPKLL-------YPSNYR 271 (303)
T ss_pred CeEEECCCCCCCEEEEEehHHHHHHhCCeeecccceeecCCCCCEEEEEEEEcCCCCCeEeCchhhC-------CCCCcc
Confidence 9999999999 69999999999999999999999999988888999999999999999999999875 34 499
Q ss_pred HHHHHHHHHHcccC--cchhhhcCC
Q 030401 156 YAEYRHIFYNRRLD--VSFIDMLKL 178 (178)
Q Consensus 156 ~~d~~~~~~~~~~~--~~~l~~~~~ 178 (178)
++||++.+.+.... ++.++.+|+
T Consensus 272 ~~eyl~~~~~~~~~~~~~~~~~~~~ 296 (303)
T PLN02403 272 FQDYLKLYSTTKFGDKGPRFESMKK 296 (303)
T ss_pred HHHHHHHHHHhccccccchHHHhhh
Confidence 99999999974443 666888774
No 26
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only]
Probab=100.00 E-value=8.1e-46 Score=302.03 Aligned_cols=166 Identities=29% Similarity=0.456 Sum_probs=148.3
Q ss_pred CHHHHHHHHHHHHHHCCCChhhHHHhhcCCcceEEEeccCCCCCCCCCccccCCCCCCCeeEEeeeCCcCceEEEEC-Ce
Q 030401 1 MRKVATSLVRSMAMALELEAQEISDAYQEGLYEVRTTLYPPCPEPERVIGITQHADYSGITLLLECGNIPGLQVLKD-GQ 79 (178)
Q Consensus 1 m~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~H~D~~~lTll~q~~~~~GLqv~~~-g~ 79 (178)
|.+++.+||++||.+|+|++++|.+.++++.+++|+++||+.+..++..|.|+|+|+|+||||+| |+++||||... |+
T Consensus 143 ~~~~~~rLL~aiA~~LdL~~d~Fd~~~~d~~~~~RLlrYP~~~~~~~~~~~GaHtD~G~lTLl~Q-d~~~GLqv~~~~g~ 221 (322)
T COG3491 143 MTAVGLRLLRAIALGLDLPEDFFDKRTSDPNSVLRLLRYPSRPAREGADGVGAHTDYGLLTLLFQ-DDVGGLEVRPPNGG 221 (322)
T ss_pred HHHHHHHHHHHHHHHcCCChhhhhhccCCchheEEEEecCCCcccccccccccccCCCeEEEEEe-cccCCeEEecCCCC
Confidence 67899999999999999999999999999999999999999998888889999999999999999 99999999985 99
Q ss_pred EEEecCCCCcEEEecchhHHHhccCcccCCCCCCCCCCCCceEEEEEeeccCCCcEEecCc-cccCCCCCCCCCCc----
Q 030401 80 WVTVIPVDGAIVANIGHIMEIMSNGIYKAPDHRAMVNRFKERRSITTFCFPSSSVKIGPAK-EFTKSGTPPLYRTL---- 154 (178)
Q Consensus 80 W~~v~~~~~~~vvn~Gd~l~~~TnG~~~s~~HRV~~~~~~~R~S~~~F~~p~~d~~i~p~~-~~~~~~~p~~y~~~---- 154 (178)
|++|+|.||++|||+||+||+||||+++||+|||+.++..+||||+||+.|+.|+.|.|+. .+.+...+.++.+-
T Consensus 222 Wl~v~P~pgtlvVNiGdmLe~~Tng~lrST~HRV~~~~~~~R~SipfF~~p~~Da~I~Pl~~l~~~~a~~~~~~~t~~~n 301 (322)
T COG3491 222 WLDVPPIPGTLVVNIGDMLERWTNGRLRSTVHRVRNPPGVDRYSIPFFLEPNFDAEIAPLLPLCPEAANEPRGPGTDPDN 301 (322)
T ss_pred eeECCCCCCeEEEeHHHHHHHHhCCeeccccceeecCCCccceeeeeeccCCCCccccccCCCCcccccCCcCCCCCCCc
Confidence 9999999999999999999999999999999999999889999999999999999999865 44455566677664
Q ss_pred -cHHHHHHHHHHcc
Q 030401 155 -TYAEYRHIFYNRR 167 (178)
Q Consensus 155 -~~~d~~~~~~~~~ 167 (178)
-.+||-...++++
T Consensus 302 ~l~r~~~~n~~~~r 315 (322)
T COG3491 302 PLLRDYATNFLKRR 315 (322)
T ss_pred hHHHHHHHHHHHHh
Confidence 3345555544443
No 27
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit. The holoenzyme has the activity (1.14.11.2 from EC) catalysing the reaction: Procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2. The full enzyme consists of a alpha2 beta2 complex with the alpha subunit contributing most of the parts of the active site []. The family also includes lysyl hydrolases, isopenicillin synthases and AlkB. ; GO: 0016491 oxidoreductase activity, 0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, 0055114 oxidation-reduction process; PDB: 3ON7_D 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=99.94 E-value=2.3e-27 Score=166.20 Aligned_cols=95 Identities=41% Similarity=0.695 Sum_probs=76.7
Q ss_pred ceEEEeccCCCCCCCCCccccCCCCC--CCeeEEeeeCCcCceEEEECCeEEEecCCCCcEEEecchhHHHhccCcccCC
Q 030401 32 YEVRTTLYPPCPEPERVIGITQHADY--SGITLLLECGNIPGLQVLKDGQWVTVIPVDGAIVANIGHIMEIMSNGIYKAP 109 (178)
Q Consensus 32 ~~lr~~~Yp~~~~~~~~~g~~~H~D~--~~lTll~q~~~~~GLqv~~~g~W~~v~~~~~~~vvn~Gd~l~~~TnG~~~s~ 109 (178)
+.+|+++||+ ++...|+++|+|. +++|+++| ++++|||+..+++|+.|++.++.++||+||+|++||||.++|+
T Consensus 2 ~~~~~~~Y~~---~~~~~~~~~H~D~~~~~~Til~~-~~~~gL~~~~~~~~~~v~~~~~~~~v~~G~~l~~~t~g~~~~~ 77 (98)
T PF03171_consen 2 SQLRLNRYPP---PENGVGIGPHTDDEDGLLTILFQ-DEVGGLQVRDDGEWVDVPPPPGGFIVNFGDALEILTNGRYPAT 77 (98)
T ss_dssp -EEEEEEE-S---CCGCEEEEEEEES--SSEEEEEE-TSTS-EEEEETTEEEE----TTCEEEEEBHHHHHHTTTSS---
T ss_pred CEEEEEECCC---cccCCceeCCCcCCCCeEEEEec-ccchheeccccccccCccCccceeeeeceeeeecccCCccCCc
Confidence 5799999998 5678899999999 99999999 8999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCceEEEEEeecc
Q 030401 110 DHRAMVNRFKERRSITTFCFP 130 (178)
Q Consensus 110 ~HRV~~~~~~~R~S~~~F~~p 130 (178)
.|||+.+....|+|++||++|
T Consensus 78 ~HrV~~~~~~~R~s~~~f~~p 98 (98)
T PF03171_consen 78 LHRVVPPTEGERYSLTFFLRP 98 (98)
T ss_dssp -EEEE--STS-EEEEEEEEE-
T ss_pred eeeeEcCCCCCEEEEEEEECC
Confidence 999999888999999999987
No 28
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues. Mammalian enzymes catalyse hydroxylation of collagen, for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases, requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor.
Probab=96.91 E-value=0.018 Score=43.96 Aligned_cols=107 Identities=21% Similarity=0.084 Sum_probs=73.4
Q ss_pred HHHHHHHHHHHHHCCCChhhHHHhhcCCcceEEEeccCCCCCCCCCccccCCCCCC--------CeeEEeee--CCcCc-
Q 030401 3 KVATSLVRSMAMALELEAQEISDAYQEGLYEVRTTLYPPCPEPERVIGITQHADYS--------GITLLLEC--GNIPG- 71 (178)
Q Consensus 3 ~l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~H~D~~--------~lTll~q~--~~~~G- 71 (178)
.+...|.+.++..++++.. .......+.+.+|.+-. ...+|.|.. .+|+++.- +..+|
T Consensus 59 ~~~~~l~~~i~~~~~~~~~-----~~~~~~~~~~~~Y~~g~------~~~~H~D~~~~~~~~~r~~T~~~yLn~~~~GG~ 127 (178)
T smart00702 59 LVIERIRQRLADFLGLLRG-----LPLSAEDAQVARYGPGG------HYGPHVDNFEDDENGDRIATFLLYLNDVEEGGE 127 (178)
T ss_pred HHHHHHHHHHHHHHCCCch-----hhccCcceEEEEECCCC------cccCcCCCCCCCCCCCeEEEEEEEeccCCcCce
Confidence 4677788888888887522 12234568899998732 378899966 58887762 22344
Q ss_pred eEEEECC--eEEEecCCCCcEEEecchhHHHhccCcccCCCCCCCCCCCCceEEEEEeec
Q 030401 72 LQVLKDG--QWVTVIPVDGAIVANIGHIMEIMSNGIYKAPDHRAMVNRFKERRSITTFCF 129 (178)
Q Consensus 72 Lqv~~~g--~W~~v~~~~~~~vvn~Gd~l~~~TnG~~~s~~HRV~~~~~~~R~S~~~F~~ 129 (178)
|.+...+ ....|.|..|.+++.-... +.+.|.|.......|+++..+++
T Consensus 128 ~~f~~~~~~~~~~v~P~~G~~v~f~~~~---------~~~~H~v~pv~~G~r~~~~~W~~ 178 (178)
T smart00702 128 LVFPGLGLMVCATVKPKKGDLLFFPSGR---------GRSLHGVCPVTRGSRWAITGWIR 178 (178)
T ss_pred EEecCCCCccceEEeCCCCcEEEEeCCC---------CCccccCCcceeCCEEEEEEEEC
Confidence 7776643 3568899999887754220 16789998766689999998764
No 29
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A ....
Probab=96.73 E-value=0.00081 Score=46.47 Aligned_cols=79 Identities=24% Similarity=0.187 Sum_probs=54.3
Q ss_pred EEEeccCCCCCCCCCccccCCCCC-----CCeeEEeeeC------CcCceEEEE----CCeEEEec-----CCCCcEEEe
Q 030401 34 VRTTLYPPCPEPERVIGITQHADY-----SGITLLLECG------NIPGLQVLK----DGQWVTVI-----PVDGAIVAN 93 (178)
Q Consensus 34 lr~~~Yp~~~~~~~~~g~~~H~D~-----~~lTll~q~~------~~~GLqv~~----~g~W~~v~-----~~~~~~vvn 93 (178)
+++++|++ .-..++|+|. ..+|+++.-+ ..+.|++.. ++....++ |.+|.+++.
T Consensus 1 ~~~~~y~~------G~~~~~H~D~~~~~~~~~t~llyL~~~~~~~~GG~l~~~~~~~~~~~~~~~~~~~~~p~~g~~v~F 74 (100)
T PF13640_consen 1 MQLNRYPP------GGFFGPHTDNSYDPHRRVTLLLYLNDPEWEFEGGELEFYPSKDSDDVSREVEDFDIVPKPGRLVIF 74 (100)
T ss_dssp -EEEEEET------TEEEEEEESSSCCCSEEEEEEEESS-CS-HCEE--EEETTTS-TSSTCEEEGGGSEE-BTTEEEEE
T ss_pred CEEEEECc------CCEEeeeECCCCCCcceEEEEEEECCCCcccCCCEEEEeccccCCCcceEEEeccccCCCCEEEEE
Confidence 46777766 3348899998 5888885422 224588874 35566666 999998887
Q ss_pred cchhHHHhccCcccCCCCCCCCC-CCCceEEEEEeec
Q 030401 94 IGHIMEIMSNGIYKAPDHRAMVN-RFKERRSITTFCF 129 (178)
Q Consensus 94 ~Gd~l~~~TnG~~~s~~HRV~~~-~~~~R~S~~~F~~ 129 (178)
-+ ..++|+|... ....|+++.+|+.
T Consensus 75 ~~-----------~~~~H~v~~v~~~~~R~~l~~~~~ 100 (100)
T PF13640_consen 75 PS-----------DNSLHGVTPVGEGGRRYSLTFWFH 100 (100)
T ss_dssp ES-----------CTCEEEEEEE-EESEEEEEEEEEE
T ss_pred eC-----------CCCeecCcccCCCCCEEEEEEEEC
Confidence 65 4568999876 6789999999874
No 30
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional
Probab=96.47 E-value=0.034 Score=44.74 Aligned_cols=107 Identities=17% Similarity=0.004 Sum_probs=63.7
Q ss_pred HHHHHHHHHHHHCCCChhhHHHhhcCCcceEEEeccCCCCCCCCCccccCCCCCCC-------------ee--EEeeeC-
Q 030401 4 VATSLVRSMAMALELEAQEISDAYQEGLYEVRTTLYPPCPEPERVIGITQHADYSG-------------IT--LLLECG- 67 (178)
Q Consensus 4 l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~H~D~~~-------------lT--ll~q~~- 67 (178)
++..|.+.+...|.-.+-+....+.....-.++++|.+-. ..++|.|... +| +-+.+.
T Consensus 52 ~a~~l~~~i~~~L~~~~l~~sa~lp~~i~~~~f~rY~~G~------~y~~H~D~~~~~~~~~~~~~rs~lS~~lyLnd~~ 125 (226)
T PRK05467 52 LARELGNLILDALTRNPLFFSAALPRKIHPPLFNRYEGGM------SYGFHVDNAVRSLPGTGGRVRTDLSATLFLSDPD 125 (226)
T ss_pred HHHHHHHHHHHHHhcCchhhhhccccccccceEEEECCCC------ccCccccCCcccCCCCCcceeEEEEEEEEeCCCC
Confidence 4455555555555433333223333333456789998643 3667777642 22 223311
Q ss_pred --CcCceEEEECCeEEEecCCCCcEEEecchhHHHhccCcccCCCCCCCCCCCCceEEEEEee
Q 030401 68 --NIPGLQVLKDGQWVTVIPVDGAIVANIGHIMEIMSNGIYKAPDHRAMVNRFKERRSITTFC 128 (178)
Q Consensus 68 --~~~GLqv~~~g~W~~v~~~~~~~vvn~Gd~l~~~TnG~~~s~~HRV~~~~~~~R~S~~~F~ 128 (178)
..+.|.+.....=..|.|..|.+|+.-. +.+|+|..-....|+++.+.+
T Consensus 126 ~yeGGEl~~~~~~g~~~Vkp~aG~~vlfps------------~~lH~v~pVt~G~R~~~~~Wi 176 (226)
T PRK05467 126 DYDGGELVIEDTYGEHRVKLPAGDLVLYPS------------TSLHRVTPVTRGVRVASFFWI 176 (226)
T ss_pred CCcCCceEEecCCCcEEEecCCCeEEEECC------------CCceeeeeccCccEEEEEecH
Confidence 2344877753222578888888888664 478999876778899988764
No 31
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A ....
Probab=93.06 E-value=0.82 Score=35.02 Aligned_cols=88 Identities=17% Similarity=0.117 Sum_probs=46.4
Q ss_pred cceEEEeccCCCCCCCCCccccCCCCCCCe---eEEee--eCCcCceEEEE---CCeEEEecCCCCcEEEecchhHHHhc
Q 030401 31 LYEVRTTLYPPCPEPERVIGITQHADYSGI---TLLLE--CGNIPGLQVLK---DGQWVTVIPVDGAIVANIGHIMEIMS 102 (178)
Q Consensus 31 ~~~lr~~~Yp~~~~~~~~~g~~~H~D~~~l---Tll~q--~~~~~GLqv~~---~g~W~~v~~~~~~~vvn~Gd~l~~~T 102 (178)
...+-+|+|.+ +. ++++|.|...+ ..+.. -....=+.+.. ++..+.+...+|+++|+-|++=..|
T Consensus 96 ~n~~liN~Y~~-----g~-~i~~H~D~~~~~~~~~I~slSLG~~~~~~f~~~~~~~~~~~~~L~~gsl~vm~g~~r~~~- 168 (194)
T PF13532_consen 96 PNQCLINYYRD-----GS-GIGPHSDDEEYGFGPPIASLSLGSSRVFRFRNKSDDDEPIEVPLPPGSLLVMSGEARYDW- 168 (194)
T ss_dssp -SEEEEEEESS-----TT--EEEE---TTC-CCSEEEEEEEES-EEEEEEECGGTS-EEEEEE-TTEEEEEETTHHHHE-
T ss_pred CCEEEEEecCC-----CC-CcCCCCCcccccCCCcEEEEEEccCceEEEeeccCCCccEEEEcCCCCEEEeChHHhhhe-
Confidence 45678999987 23 79999998733 11111 00111133333 3689999999999999999997777
Q ss_pred cCcccCCCCCCCC--CCCCceEEEEE
Q 030401 103 NGIYKAPDHRAMV--NRFKERRSITT 126 (178)
Q Consensus 103 nG~~~s~~HRV~~--~~~~~R~S~~~ 126 (178)
.|.-+... .... .....|+|+.|
T Consensus 169 H~I~~~~~-~~~~~~~~~~~RislTf 193 (194)
T PF13532_consen 169 HGIPPVKK-DTHPSHYVRGRRISLTF 193 (194)
T ss_dssp EEE-S-SC-EEEESTEE-S-EEEEEE
T ss_pred eEcccccC-CccccccCCCCEEEEEe
Confidence 66433211 0000 01347999987
No 32
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro []. Interestingly TET2 is considered as an oncogene, as it is found mutated in some types of cancer []. This entry represents the double-stranded beta helix (DSBH) fold of the 2-oxoglutarate (2OG) - Fe(II) oxygenases. DSBH comprises a part of the catalytic domain in TETS. It is found in many organisms including fruit fly, African malaria mosquito, zebrafish, mouse and human.
Probab=92.91 E-value=0.48 Score=36.40 Aligned_cols=71 Identities=17% Similarity=0.047 Sum_probs=47.0
Q ss_pred CccccCCCCC----CCeeEEeeeC---CcCceEEEEC----CeEEEecCCCCcEEEecchhHHHhccCcccCCCCCCCCC
Q 030401 48 VIGITQHADY----SGITLLLECG---NIPGLQVLKD----GQWVTVIPVDGAIVANIGHIMEIMSNGIYKAPDHRAMVN 116 (178)
Q Consensus 48 ~~g~~~H~D~----~~lTll~q~~---~~~GLqv~~~----g~W~~v~~~~~~~vvn~Gd~l~~~TnG~~~s~~HRV~~~ 116 (178)
......|.|. ..+|+++.-. ..+|+-+... .-=+.+.+.+|++++..|..+ .|-|..-
T Consensus 84 nr~t~~HrD~~~~~~~~~~~~t~~~gd~~~g~l~lp~~~~~~~g~~~~~~~GtVl~~~~~~~-----------~Hgvtpv 152 (171)
T PF12851_consen 84 NRCTHSHRDTHNMPNGYDVLCTLGRGDYDGGRLELPGLDPNILGVAFAYQPGTVLIFCAKRE-----------LHGVTPV 152 (171)
T ss_pred ecCccceecCCCCCCCeEEEEecCCccccCceEeccccccccCCEEEecCCCcEEEEcccce-----------eeecCcc
Confidence 3457889999 7778887621 2345554432 134677889999999888543 3444332
Q ss_pred -----CCCceEEEEEeec
Q 030401 117 -----RFKERRSITTFCF 129 (178)
Q Consensus 117 -----~~~~R~S~~~F~~ 129 (178)
.+.+|+|++||++
T Consensus 153 ~~~~~~~~~R~slvfy~h 170 (171)
T PF12851_consen 153 ESPNRNHGTRISLVFYQH 170 (171)
T ss_pred cCCCCCCCeEEEEEEEeE
Confidence 2378999999975
No 33
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional
Probab=91.00 E-value=6.9 Score=31.23 Aligned_cols=87 Identities=15% Similarity=0.125 Sum_probs=48.3
Q ss_pred cceEEEeccCCCCCCCCCccccCCCCCCC-----eeEEeeeCCcCc-eEEE---ECCeEEEecCCCCcEEEecchhHHHh
Q 030401 31 LYEVRTTLYPPCPEPERVIGITQHADYSG-----ITLLLECGNIPG-LQVL---KDGQWVTVIPVDGAIVANIGHIMEIM 101 (178)
Q Consensus 31 ~~~lr~~~Yp~~~~~~~~~g~~~H~D~~~-----lTll~q~~~~~G-Lqv~---~~g~W~~v~~~~~~~vvn~Gd~l~~~ 101 (178)
...+-+|+|.+- . +++.|.|-.- .-+-.+ =+.+. +.+. +++.+..+....|+++|+-|+. +.|
T Consensus 115 p~a~LvN~Y~~G-----~-~mg~H~D~~E~~~~~pI~SvS-LG~~~~F~~~~~~~~~~~~~l~L~~Gdllvm~G~s-r~~ 186 (213)
T PRK15401 115 PDACLINRYAPG-----A-KLSLHQDKDERDFRAPIVSVS-LGLPAVFQFGGLKRSDPLQRILLEHGDVVVWGGPS-RLR 186 (213)
T ss_pred CCEEEEEeccCc-----C-ccccccCCCcccCCCCEEEEe-CCCCeEEEecccCCCCceEEEEeCCCCEEEECchH-hhe
Confidence 345789999873 2 7999999521 111111 01111 2222 2456889999999999999985 443
Q ss_pred ccCcccCCCCCCCCC-CCCceEEEEEe
Q 030401 102 SNGIYKAPDHRAMVN-RFKERRSITTF 127 (178)
Q Consensus 102 TnG~~~s~~HRV~~~-~~~~R~S~~~F 127 (178)
=.|.-+- .+...+ .+..|+|+.|=
T Consensus 187 ~HgVp~~--~~~~~p~~g~~RINLTFR 211 (213)
T PRK15401 187 YHGILPL--KAGEHPLTGECRINLTFR 211 (213)
T ss_pred eccCCcC--CCCcCCCCCCCeEEEEeE
Confidence 3332110 011111 12379999873
No 34
>TIGR02466 conserved hypothetical protein. This family consists of uncharacterized proteins in Caulobacter crescentus CB15, Bdellovibrio bacteriovorus HD100, Synechococcus sp. WH 8102 (2), Silicibacter pomeroyi DSS-3 (2), and Hyphomonas neptunium ATCC 15444. The context of nearby genes differs substantially between members and does point to any specific biological role.
Probab=86.78 E-value=4.6 Score=31.87 Aligned_cols=39 Identities=23% Similarity=0.231 Sum_probs=30.6
Q ss_pred CeEEEecCCCCcEEEecchhHHHhccCcccCCCCCCCCCC-CCceEEEEEee
Q 030401 78 GQWVTVIPVDGAIVANIGHIMEIMSNGIYKAPDHRAMVNR-FKERRSITTFC 128 (178)
Q Consensus 78 g~W~~v~~~~~~~vvn~Gd~l~~~TnG~~~s~~HRV~~~~-~~~R~S~~~F~ 128 (178)
..|+.+.|.+|.+++.-+. -.|+|.... +.+|+|++|-+
T Consensus 159 ~~~~~v~P~~G~lvlFPS~------------L~H~v~p~~~~~~RISiSFNl 198 (201)
T TIGR02466 159 QRFVYVPPQEGRVLLFESW------------LRHEVPPNESEEERISVSFNY 198 (201)
T ss_pred CccEEECCCCCeEEEECCC------------CceecCCCCCCCCEEEEEEee
Confidence 3588899999999887652 369998765 57999999854
No 35
>PLN00052 prolyl 4-hydroxylase; Provisional
Probab=77.04 E-value=44 Score=28.20 Aligned_cols=111 Identities=19% Similarity=0.178 Sum_probs=65.9
Q ss_pred HHHHHHHHHHHHCCCChhhHHHhhcCCcceEEEeccCCCCCCCCCccccCCCCCC------------CeeEEeeeC--Cc
Q 030401 4 VATSLVRSMAMALELEAQEISDAYQEGLYEVRTTLYPPCPEPERVIGITQHADYS------------GITLLLECG--NI 69 (178)
Q Consensus 4 l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~H~D~~------------~lTll~q~~--~~ 69 (178)
+...|.+-|+...|++.+ ..-.+++.+|-+-.. ..+|.|+. +.|+|+.-+ ..
T Consensus 112 vv~~I~~Ria~~t~lp~~--------~~E~lQVlrY~~Gq~------Y~~H~D~~~~~~~~~~gg~R~aTvL~YLndv~~ 177 (310)
T PLN00052 112 VVSRIEERIAAWTFLPEE--------NAENIQILRYEHGQK------YEPHFDYFHDKINQALGGHRYATVLMYLSTVDK 177 (310)
T ss_pred HHHHHHHHHHHHhCCCcc--------cCcceEEEecCCCCC------CCCCCCccccccccccCCceeEEEEEEeccCCC
Confidence 445566666666666632 233478888876543 67788843 577777632 23
Q ss_pred CceEEEECCe-----------------EEEecCCCCcEEEecchhHHHhccCc-ccCCCCCCCCCCCCceEEEEEeeccC
Q 030401 70 PGLQVLKDGQ-----------------WVTVIPVDGAIVANIGHIMEIMSNGI-YKAPDHRAMVNRFKERRSITTFCFPS 131 (178)
Q Consensus 70 ~GLqv~~~g~-----------------W~~v~~~~~~~vvn~Gd~l~~~TnG~-~~s~~HRV~~~~~~~R~S~~~F~~p~ 131 (178)
+|=-+..+.+ =+.|.|..|..++.-- ...||. =+.++|.+...-..+++++.-.++-.
T Consensus 178 GGeT~FP~~~~~~~~~~~~~~s~c~~~gl~VkPkkG~ALlF~n----l~~dG~~D~~SlHagcPVi~G~Kw~atkWi~~~ 253 (310)
T PLN00052 178 GGETVFPNAEGWENQPKDDTFSECAHKGLAVKPVKGDAVLFFS----LHIDGVPDPLSLHGSCPVIEGEKWSAPKWIHIR 253 (310)
T ss_pred CCceecCCcccccccccccchhhhhcCCeEeccCcceEEEEec----cCCCCCCCcccccCCCeeecCeEEEEEEeeecc
Confidence 3322222111 1778898888666432 223443 25678988665567899988877764
Q ss_pred C
Q 030401 132 S 132 (178)
Q Consensus 132 ~ 132 (178)
.
T Consensus 254 ~ 254 (310)
T PLN00052 254 S 254 (310)
T ss_pred c
Confidence 3
No 36
>TIGR00568 alkb DNA alkylation damage repair protein AlkB. Proteins in this family have an as of yet undetermined function in the repair of alkylation damage to DNA. Alignment and family designation based on phylogenomic analysis of Jonathan A. Eisen (PhD Thesis, Stanford University, 1999).
Probab=74.81 E-value=30 Score=26.42 Aligned_cols=59 Identities=14% Similarity=0.104 Sum_probs=37.2
Q ss_pred CcceEEEeccCCCCCCCCCccccCCCCCCCeeEEeeeCCcCce--------EEE---ECCeEEEecCCCCcEEEecchh
Q 030401 30 GLYEVRTTLYPPCPEPERVIGITQHADYSGITLLLECGNIPGL--------QVL---KDGQWVTVIPVDGAIVANIGHI 97 (178)
Q Consensus 30 ~~~~lr~~~Yp~~~~~~~~~g~~~H~D~~~lTll~q~~~~~GL--------qv~---~~g~W~~v~~~~~~~vvn~Gd~ 97 (178)
....+-+|+|++- -++++|.|-.-+. .. ..+.++ .+. +++....+...+|+++|+-|+.
T Consensus 93 ~~n~~LvN~Y~~G------d~mg~H~D~~e~~--~~-~pI~SvSLG~~r~F~~~~~~~~~~~~~l~L~sGsllvM~G~s 162 (169)
T TIGR00568 93 QPDACLVNRYAPG------ATLSLHQDRDEPD--LR-APLLSVSLGLPAIFLIGGLKRNDPPKRLRLHSGDVVIMGGES 162 (169)
T ss_pred CCCEEEEEeecCC------Ccccccccccccc--CC-CCEEEEeCCCCEEEEecCCcCCCceEEEEeCCCCEEEECCch
Confidence 3456779999873 3699999953221 01 122221 222 1455788899999999999863
No 37
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A.
Probab=74.20 E-value=3.4 Score=28.46 Aligned_cols=37 Identities=27% Similarity=0.205 Sum_probs=22.7
Q ss_pred CeEEEecCCCCcEEEecchhHHHhccCcccCCCCCCCCCC-CCceEEEEE
Q 030401 78 GQWVTVIPVDGAIVANIGHIMEIMSNGIYKAPDHRAMVNR-FKERRSITT 126 (178)
Q Consensus 78 g~W~~v~~~~~~~vvn~Gd~l~~~TnG~~~s~~HRV~~~~-~~~R~S~~~ 126 (178)
..+..++|.+|.++|.=+. ..|+|.... +.+|+|++|
T Consensus 63 ~~~~~~~p~~G~lvlFPs~------------l~H~v~p~~~~~~Risisf 100 (101)
T PF13759_consen 63 SPYYIVEPEEGDLVLFPSW------------LWHGVPPNNSDEERISISF 100 (101)
T ss_dssp -SEEEE---TTEEEEEETT------------SEEEE----SSS-EEEEEE
T ss_pred CceEEeCCCCCEEEEeCCC------------CEEeccCcCCCCCEEEEEc
Confidence 4688899999999998773 368887654 468999987
No 38
>COG3128 PiuC Uncharacterized iron-regulated protein [Function unknown]
Probab=62.23 E-value=56 Score=25.84 Aligned_cols=22 Identities=14% Similarity=-0.084 Sum_probs=16.5
Q ss_pred CCCCCCCCCCCCceEEEEEeec
Q 030401 108 APDHRAMVNRFKERRSITTFCF 129 (178)
Q Consensus 108 s~~HRV~~~~~~~R~S~~~F~~ 129 (178)
.++|+|..-....|+.+.|++.
T Consensus 159 tSlH~VtPVTRg~R~asffW~q 180 (229)
T COG3128 159 TSLHEVTPVTRGERFASFFWIQ 180 (229)
T ss_pred ccceeccccccCceEEEeeehH
Confidence 3589998777788998777643
No 39
>smart00460 TGc Transglutaminase/protease-like homologues. Transglutaminases are enzymes that establish covalent links between proteins. A subset of transglutaminase homologues appear to catalyse the reverse reaction, the hydrolysis of peptide bonds. Proteins with this domain are both extracellular and intracellular, and it is likely that the eukaryotic intracellular proteins are involved in signalling events.
Probab=41.50 E-value=27 Score=21.42 Aligned_cols=16 Identities=38% Similarity=0.715 Sum_probs=12.6
Q ss_pred eEEEECCeEEEecCCC
Q 030401 72 LQVLKDGQWVTVIPVD 87 (178)
Q Consensus 72 Lqv~~~g~W~~v~~~~ 87 (178)
+||+.+++|+.++|.+
T Consensus 53 ~ev~~~~~W~~~D~~~ 68 (68)
T smart00460 53 AEVYLEGGWVPVDPTP 68 (68)
T ss_pred EEEEECCCeEEEeCCC
Confidence 6677788999998754
No 40
>COG2140 Thermophilic glucose-6-phosphate isomerase and related metalloenzymes [Carbohydrate transport and metabolism / General function prediction only]
Probab=41.05 E-value=73 Score=25.39 Aligned_cols=37 Identities=19% Similarity=0.114 Sum_probs=24.5
Q ss_pred CCeEEEecCCCCcEEEecchhHHHhccCcccCCCCCC
Q 030401 77 DGQWVTVIPVDGAIVANIGHIMEIMSNGIYKAPDHRA 113 (178)
Q Consensus 77 ~g~W~~v~~~~~~~vvn~Gd~l~~~TnG~~~s~~HRV 113 (178)
.|.=+.||+.-++.++|+||-=-++.|=...+..+.+
T Consensus 132 ~Gd~iyVPp~~gH~t~N~Gd~pLvf~~v~~~~~~~~y 168 (209)
T COG2140 132 AGDVIYVPPGYGHYTINTGDEPLVFLNVYPADAGQDY 168 (209)
T ss_pred CCcEEEeCCCcceEeecCCCCCEEEEEEEeCCCCcee
Confidence 4777778888888888888765555554444444444
No 41
>PRK01964 4-oxalocrotonate tautomerase; Provisional
Probab=34.97 E-value=46 Score=20.57 Aligned_cols=21 Identities=5% Similarity=0.335 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHHCCCChhh
Q 030401 2 RKVATSLVRSMAMALELEAQE 22 (178)
Q Consensus 2 ~~l~~~ll~~l~~~Lgl~~~~ 22 (178)
++++..|.+++++.||.|++.
T Consensus 18 ~~l~~~it~~l~~~lg~p~~~ 38 (64)
T PRK01964 18 KNLIREVTEAISATLDVPKER 38 (64)
T ss_pred HHHHHHHHHHHHHHhCcChhh
Confidence 478899999999999999753
No 42
>PRK02220 4-oxalocrotonate tautomerase; Provisional
Probab=33.71 E-value=53 Score=19.93 Aligned_cols=21 Identities=5% Similarity=0.142 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHHCCCChhh
Q 030401 2 RKVATSLVRSMAMALELEAQE 22 (178)
Q Consensus 2 ~~l~~~ll~~l~~~Lgl~~~~ 22 (178)
++++..|.+++++.+|++++.
T Consensus 18 ~~l~~~it~~l~~~~~~p~~~ 38 (61)
T PRK02220 18 KALVKDVTAAVSKNTGAPAEH 38 (61)
T ss_pred HHHHHHHHHHHHHHhCcChhh
Confidence 478899999999999998653
No 43
>PF01361 Tautomerase: Tautomerase enzyme; InterPro: IPR004370 4-Oxalocrotonate tautomerase (4-OT) catalyzes the isomerisation of beta,gamma-unsaturated enones to their alpha,beta-isomers. The enzyme is part of a plasmid-encoded pathway, which enables bacteria harbouring the plasmid to use various aromatic hydrocarbons as their sole sources of carbon and energy. The enzyme is a barrel-shaped hexamer, which can be viewed as a trimer of dimers. The hexamer contains a hydrophobic core formed by three beta-sheets and surrounded by three pairs of alpha-helices. Each 4-OT monomer of 62 amino acids has a relatively simple beta-alpha-beta fold as described by the structure of the enzyme from Pseudomonas putida []. The monomer begins with a conserved proline at the start of a beta-strand, followed by an alpha-helix and a 310 helix preceding a second parallel beta-strand, and ends with a beta-hairpin near the C terminus. The dimer results from antiparallel interactions between the beta-sheets and alpha-helices of the two monomers, forming a four-stranded beta-sheet with antiparallel alpha-helices on one side, creating two active sites, one at each end of the beta-sheet. Three dimers further associate to form a hexamer by the interactions of the strands of the C-terminal beta-hairpin loops with the edges of the four-stranded beta-sheets of neighbouring dimers, creating a series of cross-links that stabilise the hexamer Pro-1 of the mature protein functions as the general base while Arg-39 and an ordered water molecule each provide a hydrogen bond to the C-2 oxygen of substrate. Arg-39 plays an additional role in the binding of the C-1 carboxylate group. Arg-11 participates both in substrate binding and in catalysis. It interacts with the C-6 carboxylate group, thereby holding the substrate in place and drawing electron density to the C-5 position. The hydrophobic nature of the active site, which lowers the pKa of Pro-1 and provides a favourable environment for catalysis, is largely maintained by Phe-50. Because several Arg residues located near the active site are not conserved among all members of this family and because of the presence of fairly distantly related paralogs in Campylobacter jejuni, the family is regarded as not necessarily uniform in function.; GO: 0016853 isomerase activity, 0006725 cellular aromatic compound metabolic process; PDB: 4OTA_H 4OTC_G 4OTB_J 2FM7_A 1BJP_B 1S0Y_K 3EJ9_E 3EJ7_K 3EJ3_I 3MB2_A ....
Probab=33.57 E-value=40 Score=20.49 Aligned_cols=21 Identities=14% Similarity=0.357 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHCCCChhh
Q 030401 2 RKVATSLVRSMAMALELEAQE 22 (178)
Q Consensus 2 ~~l~~~ll~~l~~~Lgl~~~~ 22 (178)
.+++..+.+++.+.||.+++.
T Consensus 17 ~~l~~~it~~~~~~lg~~~~~ 37 (60)
T PF01361_consen 17 RELAEAITDAVVEVLGIPPER 37 (60)
T ss_dssp HHHHHHHHHHHHHHHTS-GGG
T ss_pred HHHHHHHHHHHHHHhCcCCCe
Confidence 478899999999999998753
No 44
>TIGR00013 taut 4-oxalocrotonate tautomerase family enzyme. 4-oxalocrotonate tautomerase is a homohexamer in which each monomer is very small, at about 62 amino acids. Pro-1 of the mature protein serves as a general base. The enzyme functions in meta-cleavage pathways of aromatic hydrocarbon catabolism. Because several Arg residues located near the active site in the crystal structure of Pseudomonas putida are not conserved among all members of this family, because the literature describes a general role in the isomerization of beta,gamma-unsaturated enones to their alpha,beta-isomers, and because of the presence of fairly distantly related paralogs in Campylobacter jejuni, the family is regarded as not necessarily uniform in function.
Probab=33.23 E-value=50 Score=20.16 Aligned_cols=20 Identities=20% Similarity=0.327 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHCCCChh
Q 030401 2 RKVATSLVRSMAMALELEAQ 21 (178)
Q Consensus 2 ~~l~~~ll~~l~~~Lgl~~~ 21 (178)
.+++..|.+++++.||.+++
T Consensus 18 ~~l~~~it~~l~~~lg~~~~ 37 (63)
T TIGR00013 18 RQLIEGVTEAMAETLGANLE 37 (63)
T ss_pred HHHHHHHHHHHHHHhCCCcc
Confidence 46889999999999999865
No 45
>PRK02289 4-oxalocrotonate tautomerase; Provisional
Probab=31.80 E-value=41 Score=20.71 Aligned_cols=21 Identities=5% Similarity=0.083 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHHCCCChhh
Q 030401 2 RKVATSLVRSMAMALELEAQE 22 (178)
Q Consensus 2 ~~l~~~ll~~l~~~Lgl~~~~ 22 (178)
++|+..|.+++++.+|.|++.
T Consensus 18 ~~L~~~it~a~~~~~~~p~~~ 38 (60)
T PRK02289 18 NALAREVTEVVSRIAKAPKEA 38 (60)
T ss_pred HHHHHHHHHHHHHHhCcCcce
Confidence 478999999999999998654
No 46
>PRK00745 4-oxalocrotonate tautomerase; Provisional
Probab=30.51 E-value=59 Score=19.78 Aligned_cols=21 Identities=19% Similarity=0.286 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHHHCCCChhh
Q 030401 2 RKVATSLVRSMAMALELEAQE 22 (178)
Q Consensus 2 ~~l~~~ll~~l~~~Lgl~~~~ 22 (178)
.+|+..|.+++.+.+|.+++.
T Consensus 18 ~~l~~~it~~l~~~~~~p~~~ 38 (62)
T PRK00745 18 RKLVEEITRVTVETLGCPPES 38 (62)
T ss_pred HHHHHHHHHHHHHHcCCChhH
Confidence 478899999999999998754
No 47
>cd00491 4Oxalocrotonate_Tautomerase 4-Oxalocrotonate Tautomerase: Catalyzes the isomerization of unsaturated ketones. The structure is a homohexamer that is arranged as a trimer of dimers. The hexamer contains six active sites, each formed by residues from three monomers, two from one dimer and the third from a neighboring monomer. Each monomer is a beta-alpha-beta fold with two small beta strands at the C-terminus that fold back on themselves. A pair of monomers form a dimer with two-fold symmetry, consisting of a 4-stranded beta sheet with two helices on one side and two additional small beta strands at each end. The dimers are assembled around a 3-fold axis of rotation to form a hexamer, with the short beta strands from each dimer contacting the neighboring dimers.
Probab=30.08 E-value=60 Score=19.32 Aligned_cols=20 Identities=10% Similarity=0.187 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHCCCChh
Q 030401 2 RKVATSLVRSMAMALELEAQ 21 (178)
Q Consensus 2 ~~l~~~ll~~l~~~Lgl~~~ 21 (178)
++++..|.+++++.+|.+++
T Consensus 17 ~~l~~~i~~~l~~~~g~~~~ 36 (58)
T cd00491 17 RELIERVTEAVSEILGAPEA 36 (58)
T ss_pred HHHHHHHHHHHHHHhCcCcc
Confidence 46888999999999999864
No 48
>PF05118 Asp_Arg_Hydrox: Aspartyl/Asparaginyl beta-hydroxylase; InterPro: IPR007803 The alpha-ketoglutarate-dependent dioxygenase aspartyl (asparaginyl) beta-hydroxylase (1.14.11.16 from EC) specifically hydroxylates one aspartic or asparagine residue in certain epidermal growth factor-like domains of a number of proteins. Its action may be due to histidine-675, which, when mutated to an alanine residue, causes the loss of enzymatic activity in the protein []. An invertebrate alpha-ketoglutarate-dependent aspartyl/asparaginyl beta-hydroxylase, which posttranslationally hydroxylates specific aspartyl or asparaginyl residues within epidermal growth factor-like modules [], activity was found to be similar to that of the purified mammalian aspartyl/asparaginyl beta-hydroxylase with respect to cofactor requirements, stereochemistry and substrate sequence specificity []. This enzyme requires Fe2+ as a cofactor. Some vitamin K-dependent coagulation factors, as well as synthetic peptides based on the structure of the first epidermal growth factor domain of human coagulation factor IX or X, can act as acceptors.; GO: 0018193 peptidyl-amino acid modification, 0030176 integral to endoplasmic reticulum membrane; PDB: 3RCQ_A 1E5S_A 1E5R_B.
Probab=29.66 E-value=43 Score=25.20 Aligned_cols=37 Identities=14% Similarity=0.088 Sum_probs=21.8
Q ss_pred EEEecchhHHHhccCccc----CCCCCCCCCCCCceEEEEE
Q 030401 90 IVANIGHIMEIMSNGIYK----APDHRAMVNRFKERRSITT 126 (178)
Q Consensus 90 ~vvn~Gd~l~~~TnG~~~----s~~HRV~~~~~~~R~S~~~ 126 (178)
..+.+|+.-..|..|..- |-.|-|.+.++.+|+-+.+
T Consensus 117 ~~~~v~~~~~~w~~G~~~~fD~s~~H~~~N~~~~~Rv~L~v 157 (163)
T PF05118_consen 117 CYIRVGGETRHWREGECWVFDDSFEHEVWNNGDEDRVVLIV 157 (163)
T ss_dssp EEEEETTEEEB--CTEEEEE-TTS-EEEEESSSS-EEEEEE
T ss_pred eEEEECCeEEEeccCcEEEEeCCEEEEEEeCCCCCEEEEEE
Confidence 444455555566666443 6688888888888988764
No 49
>PRK01271 4-oxalocrotonate tautomerase; Provisional
Probab=24.82 E-value=62 Score=21.35 Aligned_cols=21 Identities=10% Similarity=0.147 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHHHCCCChhh
Q 030401 2 RKVATSLVRSMAMALELEAQE 22 (178)
Q Consensus 2 ~~l~~~ll~~l~~~Lgl~~~~ 22 (178)
.+|+..+-+++++.||.+++.
T Consensus 19 ~~La~~iT~a~~~~lg~~~e~ 39 (76)
T PRK01271 19 AALAADITDVIIRHLNSKDSS 39 (76)
T ss_pred HHHHHHHHHHHHHHhCcCcce
Confidence 478999999999999998754
No 50
>PF12566 DUF3748: Protein of unknown function (DUF3748); InterPro: IPR022223 This domain family is found in bacteria and eukaryotes, and is approximately 120 amino acids in length.
Probab=23.56 E-value=1.1e+02 Score=22.16 Aligned_cols=58 Identities=16% Similarity=0.002 Sum_probs=39.3
Q ss_pred CeEEEecCCCCcEEEecchhHHHhccCcccCCCCCCCCCCCCceEEEEEeeccCCCcEEecCc
Q 030401 78 GQWVTVIPVDGAIVANIGHIMEIMSNGIYKAPDHRAMVNRFKERRSITTFCFPSSSVKIGPAK 140 (178)
Q Consensus 78 g~W~~v~~~~~~~vvn~Gd~l~~~TnG~~~s~~HRV~~~~~~~R~S~~~F~~p~~d~~i~p~~ 140 (178)
|-|+.-.....+.-+.+=|+..=.|-|.++..-|.=+-.++.+|+|+.|- |.++..++
T Consensus 38 GViv~~~~~~~a~~lDA~dit~Pyt~GALRGGtHvHvfSpDG~~lSFTYN-----DhVmhe~d 95 (122)
T PF12566_consen 38 GVIVSDEQPGVAINLDAMDITPPYTPGALRGGTHVHVFSPDGSWLSFTYN-----DHVMHELD 95 (122)
T ss_pred eEEEecCCCCceeecchhcccCCCCCccccCCccceEECCCCCEEEEEec-----chhhcccc
Confidence 44444444444444555555666788889999999888888999999994 55655443
No 51
>PTZ00397 macrophage migration inhibition factor-like protein; Provisional
Probab=22.60 E-value=84 Score=21.97 Aligned_cols=20 Identities=15% Similarity=0.415 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHHHCCCChh
Q 030401 2 RKVATSLVRSMAMALELEAQ 21 (178)
Q Consensus 2 ~~l~~~ll~~l~~~Lgl~~~ 21 (178)
++++..|.+.+++.||++++
T Consensus 75 ~~l~~~i~~~l~~~lgi~~~ 94 (116)
T PTZ00397 75 SSIAAAITKILASHLKVKSE 94 (116)
T ss_pred HHHHHHHHHHHHHHhCcCcc
Confidence 46889999999999999875
No 52
>PF08140 Cuticle_1: Crustacean cuticle protein repeat; InterPro: IPR012539 This family consists of the cuticle proteins from the Cancer pagurus (Rock crab) and the Homarus americanus (American lobster). These proteins are isolated from the calcified regions of the crustacean and they contain two copies of an 18 residue sequence motif, which thus far has been found only in crustacean calcified exoskeletons [].; GO: 0042302 structural constituent of cuticle
Probab=21.93 E-value=56 Score=18.98 Aligned_cols=30 Identities=23% Similarity=0.183 Sum_probs=21.4
Q ss_pred EECCeEEEecCCCCcEEEecchhHHHhccCc
Q 030401 75 LKDGQWVTVIPVDGAIVANIGHIMEIMSNGI 105 (178)
Q Consensus 75 ~~~g~W~~v~~~~~~~vvn~Gd~l~~~TnG~ 105 (178)
..||+++..++..- -||.+|..=-+++||.
T Consensus 7 ~~dG~~~q~~~~~a-~ivl~GpSG~v~sdG~ 36 (40)
T PF08140_consen 7 TPDGTNVQFPHGVA-NIVLIGPSGAVLSDGK 36 (40)
T ss_pred CCCCCEEECCcccc-eEEEECCceEEeeCCc
Confidence 34677777776554 6788888777777775
No 53
>PF11142 DUF2917: Protein of unknown function (DUF2917); InterPro: IPR021317 This bacterial family of proteins appears to be restricted to Proteobacteria.
Probab=21.07 E-value=86 Score=19.78 Aligned_cols=34 Identities=18% Similarity=0.213 Sum_probs=26.9
Q ss_pred eEEEECCeEEEecCCCCcEEEecchhHHHhccCc
Q 030401 72 LQVLKDGQWVTVIPVDGAIVANIGHIMEIMSNGI 105 (178)
Q Consensus 72 Lqv~~~g~W~~v~~~~~~~vvn~Gd~l~~~TnG~ 105 (178)
|++...--|+.+.-.++..++..||.+..-.+++
T Consensus 20 l~v~~G~vWlT~~g~~~D~~L~~G~~l~l~~g~~ 53 (63)
T PF11142_consen 20 LRVESGRVWLTREGDPDDYWLQAGDSLRLRRGGR 53 (63)
T ss_pred EEEccccEEEECCCCCCCEEECCCCEEEeCCCCE
Confidence 4444456899999989999999999988776664
No 54
>PF10777 YlaC: Inner membrane protein YlaC; InterPro: IPR019713 The extracytoplasmic function (ECF) sigma factors are small regulatory proteins that are quite divergent in sequence relative to most other sigma factors. YlaC, regulated by YlaA, is important in oxidative stress resistance. It contributes to hydrogen peroxide resistance in Bacillus subtilis [].
Probab=20.32 E-value=45 Score=25.16 Aligned_cols=22 Identities=23% Similarity=0.412 Sum_probs=17.5
Q ss_pred cCceEEEECCeEEEecCCCCcE
Q 030401 69 IPGLQVLKDGQWVTVIPVDGAI 90 (178)
Q Consensus 69 ~~GLqv~~~g~W~~v~~~~~~~ 90 (178)
+=-|.||-+|+|+...+++...
T Consensus 93 vLDLRVCYNGEWy~tr~vs~~a 114 (155)
T PF10777_consen 93 VLDLRVCYNGEWYNTRFVSDQA 114 (155)
T ss_pred eeEEeEEEcceeeeeccCCHHH
Confidence 4457788899999999887753
No 55
>COG2879 Uncharacterized small protein [Function unknown]
Probab=20.18 E-value=1.2e+02 Score=19.50 Aligned_cols=20 Identities=20% Similarity=0.227 Sum_probs=17.0
Q ss_pred CCCCccHHHHHHHHHHcccC
Q 030401 150 LYRTLTYAEYRHIFYNRRLD 169 (178)
Q Consensus 150 ~y~~~~~~d~~~~~~~~~~~ 169 (178)
.-+++|+.||.+....+++.
T Consensus 38 d~p~mT~~EFfrec~daRy~ 57 (65)
T COG2879 38 DKPPMTYEEFFRECQDARYG 57 (65)
T ss_pred CCCcccHHHHHHHHHHhhcC
Confidence 45789999999999998875
No 56
>KOG3710 consensus EGL-Nine (EGLN) protein [Signal transduction mechanisms]
Probab=20.08 E-value=4.7e+02 Score=21.46 Aligned_cols=68 Identities=19% Similarity=0.242 Sum_probs=47.4
Q ss_pred ccCCCCCCCeeEEeeeC-------CcCceEEEECC--eEEEecCCCCcEEEecchhHHHhccCcccCCCCCCCCCCCCce
Q 030401 51 ITQHADYSGITLLLECG-------NIPGLQVLKDG--QWVTVIPVDGAIVANIGHIMEIMSNGIYKAPDHRAMVNRFKER 121 (178)
Q Consensus 51 ~~~H~D~~~lTll~q~~-------~~~GLqv~~~g--~W~~v~~~~~~~vvn~Gd~l~~~TnG~~~s~~HRV~~~~~~~R 121 (178)
-.+|-|.-+||-++.-+ ..++|++.-.| ...++.|.-|-+++. ||.- ...|-|. |.-..|
T Consensus 162 DNP~gDGRcITcIYYlNqNWD~kv~Gg~Lri~pe~~~~~adieP~fdrLlff-------wSdr---rnPhev~-Pa~~tr 230 (280)
T KOG3710|consen 162 DNPHGDGRCITCIYYLNQNWDVKVHGGILRIFPEGSTTFADIEPKFDRLLFF-------WSDR---RNPHEVQ-PAYATR 230 (280)
T ss_pred cCCCCCceEEEEEEEcccCcceeeccceeEeccCCCCcccccCcCCCeEEEE-------EecC---CCccccc-cccccc
Confidence 46888999999998621 23458887644 567788888888884 5543 4568775 355689
Q ss_pred EEEEEeec
Q 030401 122 RSITTFCF 129 (178)
Q Consensus 122 ~S~~~F~~ 129 (178)
|.|...+.
T Consensus 231 yaitvwyf 238 (280)
T KOG3710|consen 231 YAITVWYF 238 (280)
T ss_pred eEEEEEEe
Confidence 98887654
Done!