Query 030401
Match_columns 178
No_of_seqs 145 out of 1092
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 21:25:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030401.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030401hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1w9y_A 1-aminocyclopropane-1-c 100.0 5E-54 1.7E-58 358.6 14.6 177 1-177 121-305 (319)
2 1gp6_A Leucoanthocyanidin diox 100.0 1.6E-52 5.5E-57 354.2 16.5 168 1-169 176-347 (356)
3 3oox_A Putative 2OG-Fe(II) oxy 100.0 8.3E-52 2.8E-56 344.2 16.2 165 1-166 138-308 (312)
4 1odm_A Isopenicillin N synthas 100.0 2E-49 6.7E-54 332.3 12.6 165 1-169 149-326 (331)
5 1dcs_A Deacetoxycephalosporin 100.0 7.6E-49 2.6E-53 326.3 10.6 164 1-169 126-307 (311)
6 3on7_A Oxidoreductase, iron/as 100.0 3E-45 1E-49 300.7 11.9 151 1-166 113-276 (280)
7 3dkq_A PKHD-type hydroxylase S 97.0 0.0021 7.1E-08 51.1 7.4 108 4-129 71-194 (243)
8 2rg4_A Uncharacterized protein 94.8 0.39 1.3E-05 37.0 10.9 81 34-132 105-209 (216)
9 2iuw_A Alkylated repair protei 93.2 0.58 2E-05 36.6 9.1 88 29-129 123-229 (238)
10 2hbt_A EGL nine homolog 1; pro 92.9 0.21 7.1E-06 39.4 6.2 84 32-131 117-214 (247)
11 3s57_A Alpha-ketoglutarate-dep 92.7 0.51 1.8E-05 36.0 8.0 86 29-127 97-200 (204)
12 2jig_A Prolyl-4 hydroxylase; h 92.6 0.3 1E-05 37.6 6.5 111 3-131 77-218 (224)
13 3itq_A Prolyl 4-hydroxylase, a 91.7 0.58 2E-05 36.2 7.2 108 3-130 90-212 (216)
14 3tht_A Alkylated DNA repair pr 89.1 0.92 3.1E-05 37.6 6.7 108 30-146 196-328 (345)
15 3i3q_A Alpha-ketoglutarate-dep 88.4 5 0.00017 30.7 10.0 80 32-128 105-201 (211)
16 3abf_A 4-oxalocrotonate tautom 56.1 10 0.00034 22.3 2.9 22 2-23 18-39 (64)
17 2x4k_A 4-oxalocrotonate tautom 54.8 8.5 0.00029 22.4 2.4 21 2-22 20-40 (63)
18 1e5r_A Proline oxidase; oxidor 50.0 13 0.00045 29.9 3.5 64 51-128 104-175 (290)
19 2opa_A Probable tautomerase YW 44.3 16 0.00054 21.2 2.4 20 2-21 17-36 (61)
20 3kt7_A PKHD-type hydroxylase T 43.6 65 0.0022 28.7 7.1 81 33-129 125-227 (633)
21 1otf_A 4-oxalocrotonate tautom 42.7 18 0.00063 20.9 2.6 20 2-21 17-36 (62)
22 2ww6_A Fibritin, T4 fibritin; 39.1 24 0.00083 17.8 2.2 16 69-84 8-24 (27)
23 3ry0_A Putative tautomerase; o 35.1 30 0.001 20.5 2.7 21 2-22 17-37 (65)
24 3m20_A 4-oxalocrotonate tautom 34.1 27 0.00093 20.5 2.4 21 2-22 16-36 (62)
25 3m21_A Probable tautomerase HP 33.0 34 0.0012 20.4 2.7 21 2-22 20-40 (67)
26 1gyx_A YDCE, B1461, hypothetic 32.6 31 0.0011 21.2 2.6 21 2-22 18-38 (76)
27 3mb2_A 4-oxalocrotonate tautom 32.1 34 0.0012 20.7 2.7 21 2-22 18-38 (72)
28 3rcq_A Aspartyl/asparaginyl be 29.0 59 0.002 24.4 4.0 44 89-132 138-186 (197)
29 2p17_A Pirin-like protein; GK1 27.6 21 0.00072 28.3 1.3 21 45-65 48-68 (277)
30 3ej9_A Alpha-subunit of trans- 26.2 44 0.0015 20.6 2.4 21 2-22 18-38 (76)
31 2xcz_A Possible ATLS1-like lig 22.9 58 0.002 21.5 2.7 21 2-22 17-37 (115)
32 3djh_A Macrophage migration in 22.6 52 0.0018 21.9 2.4 21 2-22 73-93 (114)
33 3b64_A Macrophage migration in 22.1 72 0.0025 20.9 3.0 21 2-22 16-37 (112)
34 3fym_A Putative uncharacterize 22.1 90 0.0031 21.2 3.6 24 6-29 51-74 (130)
35 2wus_R RODZ, putative uncharac 21.4 90 0.0031 20.8 3.4 23 5-27 54-76 (112)
36 4hti_A Receptor-type tyrosine- 20.9 63 0.0022 21.6 2.4 33 5-37 26-59 (99)
37 2qt7_A Receptor-type tyrosine- 20.9 48 0.0016 21.9 1.8 32 5-36 19-51 (91)
38 2wkb_A Macrophage migration in 20.8 48 0.0016 22.5 1.9 21 2-22 17-37 (125)
39 4dh4_A MIF; trimer, isomerase; 20.6 66 0.0023 21.3 2.6 20 2-21 74-93 (114)
No 1
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=5e-54 Score=358.65 Aligned_cols=177 Identities=30% Similarity=0.606 Sum_probs=160.8
Q ss_pred CHHHHHHHHHHHHHHCCCChhhHHHhhcC---CcceEEEeccCCCCCCCCCccccCCCCCCCeeEEeeeCCcCceEEEEC
Q 030401 1 MRKVATSLVRSMAMALELEAQEISDAYQE---GLYEVRTTLYPPCPEPERVIGITQHADYSGITLLLECGNIPGLQVLKD 77 (178)
Q Consensus 1 m~~l~~~ll~~l~~~Lgl~~~~~~~~~~~---~~~~lr~~~Yp~~~~~~~~~g~~~H~D~~~lTll~q~~~~~GLqv~~~ 77 (178)
|.+++.+|+++||++|||++++|.+.+.. +.+.+|++|||||++++...|+++|||+|+||+|+|++.++||||+++
T Consensus 121 ~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~ 200 (319)
T 1w9y_A 121 LEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKD 200 (319)
T ss_dssp HHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTCCEEEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEET
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHhcCcCCccceeEEEecCCCcccccccccccccCCCceEEEEecCCCCeeeEeeC
Confidence 57899999999999999999999998863 567899999999999888999999999999999999447999999999
Q ss_pred CeEEEecCCCCcEEEecchhHHHhccCcccCCCCCCCCCCCCceEEEEEeeccCCCcEEecCccccCCC---CCCCCCCc
Q 030401 78 GQWVTVIPVDGAIVANIGHIMEIMSNGIYKAPDHRAMVNRFKERRSITTFCFPSSSVKIGPAKEFTKSG---TPPLYRTL 154 (178)
Q Consensus 78 g~W~~v~~~~~~~vvn~Gd~l~~~TnG~~~s~~HRV~~~~~~~R~S~~~F~~p~~d~~i~p~~~~~~~~---~p~~y~~~ 154 (178)
|+|++|+|.+|++|||+||+||+||||+|||+.|||+.++.++|+|++||+.|+.|++|+|++++++++ +|++|+++
T Consensus 201 g~Wi~V~p~pgalvVNiGD~l~~~SnG~~kS~~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~~ 280 (319)
T 1w9y_A 201 GQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKF 280 (319)
T ss_dssp TEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSSCCEEEEEEEECCTTCEECCCGGGC--------CCCCCE
T ss_pred CeEEEcccCCCcEEEEhHHHHHHHhCCeeecccceecCCCCCCceEEEEEecCCCCCeEeCchhhcCcccccCccccCcE
Confidence 999999999999999999999999999999999999998889999999999999999999999999987 59999999
Q ss_pred cHHHHHHHHHHcccC-cch-hhhcC
Q 030401 155 TYAEYRHIFYNRRLD-VSF-IDMLK 177 (178)
Q Consensus 155 ~~~d~~~~~~~~~~~-~~~-l~~~~ 177 (178)
+++||+..++++++. +.. ++.+|
T Consensus 281 t~~ey~~~~~~~~~~~~~~~~~~~~ 305 (319)
T 1w9y_A 281 VFDDYMKLYAGLKFQAKEPRFEAMK 305 (319)
T ss_dssp EHHHHHHTTTTTTCSSHHHHHHHHH
T ss_pred eHHHHHHHHHhhhcCcchhHHHHHH
Confidence 999999999988887 654 66665
No 2
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=1.6e-52 Score=354.18 Aligned_cols=168 Identities=33% Similarity=0.587 Sum_probs=160.9
Q ss_pred CHHHHHHHHHHHHHHCCCChhhHHHhhc---CCcceEEEeccCCCCCCCCCccccCCCCCCCeeEEeeeCCcCceEEEEC
Q 030401 1 MRKVATSLVRSMAMALELEAQEISDAYQ---EGLYEVRTTLYPPCPEPERVIGITQHADYSGITLLLECGNIPGLQVLKD 77 (178)
Q Consensus 1 m~~l~~~ll~~l~~~Lgl~~~~~~~~~~---~~~~~lr~~~Yp~~~~~~~~~g~~~H~D~~~lTll~q~~~~~GLqv~~~ 77 (178)
|.+++.+|+++||++|||++++|.+.+. .+.+.+|++|||||++++..+|+++|||+|+||||+| |+++||||+++
T Consensus 176 ~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~q-d~v~GLQV~~~ 254 (356)
T 1gp6_A 176 LRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILH-NMVPGLQLFYE 254 (356)
T ss_dssp HHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEE-CSCCCEEEEET
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEEEEE-cCCCCeEEecC
Confidence 5789999999999999999999999987 4788999999999999888999999999999999999 78999999999
Q ss_pred CeEEEecCCCCcEEEecchhHHHhccCcccCCCCCCCCCCCCceEEEEEeeccCCCc-EEecCccccCCCCCCCCCCccH
Q 030401 78 GQWVTVIPVDGAIVANIGHIMEIMSNGIYKAPDHRAMVNRFKERRSITTFCFPSSSV-KIGPAKEFTKSGTPPLYRTLTY 156 (178)
Q Consensus 78 g~W~~v~~~~~~~vvn~Gd~l~~~TnG~~~s~~HRV~~~~~~~R~S~~~F~~p~~d~-~i~p~~~~~~~~~p~~y~~~~~ 156 (178)
|+|++|+|.+|++|||+||+||+||||+|||+.|||+.++.++|+|++||++|+.|+ +|+|+++++++++|++|+++|+
T Consensus 255 g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~~~~~~~p~~y~~~t~ 334 (356)
T 1gp6_A 255 GKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTF 334 (356)
T ss_dssp TEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGCCSSSCCSSCCEEH
T ss_pred CcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCChhhcCCCCCccCCCccH
Confidence 999999999999999999999999999999999999998889999999999999999 9999999999999999999999
Q ss_pred HHHHHHHHHcccC
Q 030401 157 AEYRHIFYNRRLD 169 (178)
Q Consensus 157 ~d~~~~~~~~~~~ 169 (178)
+||+..+++++++
T Consensus 335 ~eyl~~~~~~~~d 347 (356)
T 1gp6_A 335 AQHIEHKLFGKEQ 347 (356)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccC
Confidence 9999999888766
No 3
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=8.3e-52 Score=344.19 Aligned_cols=165 Identities=27% Similarity=0.427 Sum_probs=153.8
Q ss_pred CHHHHHHHHHHHHHHCCCChhhHHHhhcCCcceEEEeccCCCCCCCCCccccCCCCCCCeeEEeeeCCcCceEEE-ECCe
Q 030401 1 MRKVATSLVRSMAMALELEAQEISDAYQEGLYEVRTTLYPPCPEPERVIGITQHADYSGITLLLECGNIPGLQVL-KDGQ 79 (178)
Q Consensus 1 m~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~H~D~~~lTll~q~~~~~GLqv~-~~g~ 79 (178)
|.+++.+|+++||++||+++++|.+.+..+.+.+|++||||+++++..+|+++|||+|+||+|+| |+++||||+ ++|+
T Consensus 138 ~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~q-d~v~GLqV~~~~g~ 216 (312)
T 3oox_A 138 LDGMGGKVLEAIATYLKLERDFFKPTVQDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLG-AEEGGLEVLDRDGQ 216 (312)
T ss_dssp HHHHHHHHHHHHHHHTTSCTTTTHHHHTTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEEC-CTTSCEEEECTTSC
T ss_pred HHHHHHHHHHHHHHHhCcCHHHHHHHhcCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeE-cCcCceEEECCCCc
Confidence 56899999999999999999999999998889999999999987655599999999999999999 889999997 5899
Q ss_pred EEEecCCCCcEEEecchhHHHhccCcccCCCCCCCCCC----CCceEEEEEeeccCCCcEEecCccccCCCCCCCCC-Cc
Q 030401 80 WVTVIPVDGAIVANIGHIMEIMSNGIYKAPDHRAMVNR----FKERRSITTFCFPSSSVKIGPAKEFTKSGTPPLYR-TL 154 (178)
Q Consensus 80 W~~v~~~~~~~vvn~Gd~l~~~TnG~~~s~~HRV~~~~----~~~R~S~~~F~~p~~d~~i~p~~~~~~~~~p~~y~-~~ 154 (178)
|++|+|.+|++|||+||+||+||||+|+|+.|||+.++ ..+|+|++||++|+.|++|+|+++++++++|++|+ ++
T Consensus 217 W~~V~p~pg~~vVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~ 296 (312)
T 3oox_A 217 WLPINPPPGCLVINIGDMLERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESI 296 (312)
T ss_dssp EEECCCCSSCEEEEECHHHHHHTTTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCE
T ss_pred EEECCCCCCeEEEEhHHHHHHHhCCeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCe
Confidence 99999999999999999999999999999999998764 46799999999999999999999999999999999 99
Q ss_pred cHHHHHHHHHHc
Q 030401 155 TYAEYRHIFYNR 166 (178)
Q Consensus 155 ~~~d~~~~~~~~ 166 (178)
+++||+..+++.
T Consensus 297 t~~eyl~~r~~~ 308 (312)
T 3oox_A 297 TADEFLQQRLRE 308 (312)
T ss_dssp EHHHHHHHHHHH
T ss_pred eHHHHHHHHHHH
Confidence 999999998874
No 4
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=2e-49 Score=332.33 Aligned_cols=165 Identities=24% Similarity=0.298 Sum_probs=154.3
Q ss_pred CHHHHHHHHHHHHHHCCCChhhHHHhhcCCcceEE--EeccC------C---CCCCCC-CccccCCCCCCCeeEEeeeCC
Q 030401 1 MRKVATSLVRSMAMALELEAQEISDAYQEGLYEVR--TTLYP------P---CPEPER-VIGITQHADYSGITLLLECGN 68 (178)
Q Consensus 1 m~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~lr--~~~Yp------~---~~~~~~-~~g~~~H~D~~~lTll~q~~~ 68 (178)
|.+++.+|+++||++|||++++|.+.++.+.+.+| ++||| | |++++. .+|+++|||+|+||||+| |+
T Consensus 149 ~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~q-d~ 227 (331)
T 1odm_A 149 VFGLSSALLKGYALALGKEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQ-SN 227 (331)
T ss_dssp HHHHHHHHHHHHHHHTTSCTTTTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEE-CS
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHhcCcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEee-CC
Confidence 57899999999999999999999999988899999 99999 7 777775 899999999999999999 78
Q ss_pred cCceEEE-ECCeEEEecCCCCcEEEecchhHHHhccCcccCCCCCCCCCCCCceEEEEEeeccCCCcEEecCccccCCCC
Q 030401 69 IPGLQVL-KDGQWVTVIPVDGAIVANIGHIMEIMSNGIYKAPDHRAMVNRFKERRSITTFCFPSSSVKIGPAKEFTKSGT 147 (178)
Q Consensus 69 ~~GLqv~-~~g~W~~v~~~~~~~vvn~Gd~l~~~TnG~~~s~~HRV~~~~~~~R~S~~~F~~p~~d~~i~p~~~~~~~~~ 147 (178)
++||||+ ++| |++|+|.+|++|||+||+||+||||+|||+.|||+. +.++|+|++||+.|+.|++|+|+++++++++
T Consensus 228 v~GLQV~~~~g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~-~~~~R~Sia~F~~P~~d~~i~pl~~~~~~~~ 305 (331)
T 1odm_A 228 VQNLQVETAAG-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKW-VNAERQSLPFFVNLGYDSVIDPFDPREPNGK 305 (331)
T ss_dssp SCCEEEEETTE-EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEEC-CCSCEEEEEEEECCCTTCBCCCCCTTSTTCC
T ss_pred CCCEEEEcCCC-eEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCC-CCCCEEEEEEEEcCCCCCEEeCCCccccccc
Confidence 9999999 578 999999999999999999999999999999999986 4789999999999999999999999998877
Q ss_pred CCCCCCccHHHHHHHHHHcccC
Q 030401 148 PPLYRTLTYAEYRHIFYNRRLD 169 (178)
Q Consensus 148 p~~y~~~~~~d~~~~~~~~~~~ 169 (178)
++|++++++||++.++++.++
T Consensus 306 -~~y~~~t~~e~l~~~~~~~~~ 326 (331)
T 1odm_A 306 -SDREPLSYGDYLQNGLVSLIN 326 (331)
T ss_dssp -CSSCCCBHHHHHHHHHHHHHH
T ss_pred -cCCCCccHHHHHHHHHHHHHH
Confidence 899999999999999887654
No 5
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=7.6e-49 Score=326.32 Aligned_cols=164 Identities=20% Similarity=0.235 Sum_probs=145.9
Q ss_pred CHHHHHHHHHHHHHHCCC----ChhhHHHhhcCCcceEEEeccCCCCCCC--C--CccccCCCCCCCeeEEeeeCCcCc-
Q 030401 1 MRKVATSLVRSMAMALEL----EAQEISDAYQEGLYEVRTTLYPPCPEPE--R--VIGITQHADYSGITLLLECGNIPG- 71 (178)
Q Consensus 1 m~~l~~~ll~~l~~~Lgl----~~~~~~~~~~~~~~~lr~~~Yp~~~~~~--~--~~g~~~H~D~~~lTll~q~~~~~G- 71 (178)
|.+++.+|+++|+++||+ ++++|.+. .+.+|++|||||++++ + .+|+++|||+|+||||+|++.++|
T Consensus 126 ~~~l~~~ll~~la~~Lgl~~~~~~~~f~~~----~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~ 201 (311)
T 1dcs_A 126 QYTASRAVAREVLRATGTEPDGGVEAFLDC----EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGF 201 (311)
T ss_dssp HHHHHHHHHHHHHHHTTCCCTTCHHHHHSC----CCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCC
T ss_pred HHHHHHHHHHHHHHHcCCCCcCcHhHHhhc----chhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCc
Confidence 578999999999999999 88888765 7789999999998764 3 778999999999999999328999
Q ss_pred --eEEEECCeEEEecCCCCcEEEecchhHHHhccCcccCCCCCCCCCC-----CCceEEEEEeeccCCCcEEecCccccC
Q 030401 72 --LQVLKDGQWVTVIPVDGAIVANIGHIMEIMSNGIYKAPDHRAMVNR-----FKERRSITTFCFPSSSVKIGPAKEFTK 144 (178)
Q Consensus 72 --Lqv~~~g~W~~v~~~~~~~vvn~Gd~l~~~TnG~~~s~~HRV~~~~-----~~~R~S~~~F~~p~~d~~i~p~~~~~~ 144 (178)
|||+++|+|++|+|.+|++|||+||+||+||||+|||+.|||+.++ .++|+|++||++|+.|++|+ ++++++
T Consensus 202 ~~LqV~~~g~W~~V~p~pg~lvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~~d~~i~-l~~~~~ 280 (311)
T 1dcs_A 202 VSLQAEVGGAFTDLPYRPDAVLVFCGAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFS-VPLARE 280 (311)
T ss_dssp CCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCTTCEEE-HHHHHH
T ss_pred eeEEEEeCCEEEeCcCCCCeEEEEHHHHHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCCCCcEEe-CCcccC
Confidence 9999999999999999999999999999999999999999999987 78999999999999999999 999999
Q ss_pred CCCCCCC--CCccHHHHHHHHHHcccC
Q 030401 145 SGTPPLY--RTLTYAEYRHIFYNRRLD 169 (178)
Q Consensus 145 ~~~p~~y--~~~~~~d~~~~~~~~~~~ 169 (178)
+++|++| +++|++||+..++++.+.
T Consensus 281 ~~~p~~y~~~~~t~~ey~~~~~~~~~~ 307 (311)
T 1dcs_A 281 CGFDVSLDGETATFQDWIGGNYVNIRR 307 (311)
T ss_dssp TTCCCCCCSSEEEHHHHHCSSCCCEEC
T ss_pred CCCccccCCCCccHHHHHHHHHHHHhc
Confidence 8899999 999999999988776554
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=3e-45 Score=300.74 Aligned_cols=151 Identities=28% Similarity=0.388 Sum_probs=135.4
Q ss_pred CHHHHHHHHHHHHHHCCCCh--hh---HHHhhcCCc-ceEEEeccCCCCCCC--CCccccCCCCCCCeeEEeeeCCcCce
Q 030401 1 MRKVATSLVRSMAMALELEA--QE---ISDAYQEGL-YEVRTTLYPPCPEPE--RVIGITQHADYSGITLLLECGNIPGL 72 (178)
Q Consensus 1 m~~l~~~ll~~l~~~Lgl~~--~~---~~~~~~~~~-~~lr~~~Yp~~~~~~--~~~g~~~H~D~~~lTll~q~~~~~GL 72 (178)
|.+++.+|+++||++||++. ++ |.+.++.+. +.+|++|||||++++ ..+|+++|||+|+||+|+| |+++||
T Consensus 113 ~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~q-d~~~GL 191 (280)
T 3on7_A 113 ANTLASELLEWIETYSPDEIKAKFSIPLPEMIANSHKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPT-ANEPGL 191 (280)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHTTCSSCHHHHHTTCSSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEEC-CSCCCE
T ss_pred HHHHHHHHHHHHHHHcCCcchhhhhHHHHHHhcCCccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEe-cCCCCe
Confidence 57899999999999999863 33 667776654 899999999998765 5789999999999999999 889999
Q ss_pred EEEE-CCeEEEecCCCCcEEEecchhHHHhccCcccCCCCCCCCCC----CCceEEEEEeeccCCCcEEecCccccCCCC
Q 030401 73 QVLK-DGQWVTVIPVDGAIVANIGHIMEIMSNGIYKAPDHRAMVNR----FKERRSITTFCFPSSSVKIGPAKEFTKSGT 147 (178)
Q Consensus 73 qv~~-~g~W~~v~~~~~~~vvn~Gd~l~~~TnG~~~s~~HRV~~~~----~~~R~S~~~F~~p~~d~~i~p~~~~~~~~~ 147 (178)
||+. +|+|++|+|.||++|||+||+||+||||+|||+.|||+.++ ..+|||++||++|+.|++|+|
T Consensus 192 qV~~~~g~W~~V~p~pg~~vVNiGD~l~~~Tng~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~~d~~i~p--------- 262 (280)
T 3on7_A 192 QVKAKDGSWLDVPSDFGNIIINIGDMLQEASDGYFPSTSHRVINPEGTDKTKSRISLPLFLHPHPSVVLSE--------- 262 (280)
T ss_dssp EEECTTSCEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEEECCTTCCTTSCEEECCEEECCCTTCBCSS---------
T ss_pred EEEcCCCCEEECcCCCCEEEEEcChHHHHHhCCcccCCCceEeCCCCCCCCCCeEEEEEEEcCCCCCEECC---------
Confidence 9995 89999999999999999999999999999999999998874 468999999999999999974
Q ss_pred CCCCCCccHHHHHHHHHHc
Q 030401 148 PPLYRTLTYAEYRHIFYNR 166 (178)
Q Consensus 148 p~~y~~~~~~d~~~~~~~~ 166 (178)
++|++||+..+++.
T Consensus 263 -----~ita~~~l~~rl~~ 276 (280)
T 3on7_A 263 -----RYTADSYLMERLRE 276 (280)
T ss_dssp -----SCBHHHHHHHHHHH
T ss_pred -----CccHHHHHHHHHHH
Confidence 68999999999874
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=96.98 E-value=0.0021 Score=51.09 Aligned_cols=108 Identities=17% Similarity=0.074 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHHCCCChhhHHHhhcCCcceEEEeccCCCCCCCCCccccCCCCCC-----------CeeEEeeeCC----
Q 030401 4 VATSLVRSMAMALELEAQEISDAYQEGLYEVRTTLYPPCPEPERVIGITQHADYS-----------GITLLLECGN---- 68 (178)
Q Consensus 4 l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~H~D~~-----------~lTll~q~~~---- 68 (178)
++..|.+.|...|+..+.++...+.....-+++++|.+-.. ..+|.|.. .+|+++.-++
T Consensus 71 ~~~~l~~~i~~~l~~~~~f~~~~L~~~~e~~~~~rY~~G~~------y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~ 144 (243)
T 3dkq_A 71 VAVALGQQIMDRLLAHPQFVSAALPLQFYPPLFNRYQGGET------FGYHIDNAIRSTPDGMIRTDLSATLFLSEPENY 144 (243)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHCEEEEEEEEEEEECTTCE------EEEECBCSEEEETTEEEECCEEEEEECSCGGGE
T ss_pred HHHHHHHHHHHHHccCcchhhcccccccccceEEEECCCCe------eccCCCCCCCCCCCccccceEEEEEEeCCCCCC
Confidence 56777788888888776554433333344588999987432 67777763 4666655222
Q ss_pred c-CceEEEECCeEEEecCCCCcEEEecchhHHHhccCcccCCCCCCCCCCCCceEEEEEeec
Q 030401 69 I-PGLQVLKDGQWVTVIPVDGAIVANIGHIMEIMSNGIYKAPDHRAMVNRFKERRSITTFCF 129 (178)
Q Consensus 69 ~-~GLqv~~~g~W~~v~~~~~~~vvn~Gd~l~~~TnG~~~s~~HRV~~~~~~~R~S~~~F~~ 129 (178)
. +.|.+.....=..|.|..|.+++.-. .++|+|.......|++++.+++
T Consensus 145 ~GGetvf~~~~~~~~V~P~~G~~v~F~s------------~~lH~v~pV~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 145 QGGELVIQDTYGQQSIKLSAGSLVLYPS------------SSLHQVTPVLSGERTAAFMWLQ 194 (243)
T ss_dssp EECCEEEEETTEEEEECCCTTCEEEEET------------TSEEEECCEEEECEEEEEEEEE
T ss_pred CCceEEEeeCCCcEEEecCCCEEEEECC------------CCeEcCccccccCEEEEEEehh
Confidence 2 33666664445689999999988643 3689997766679999999876
No 8
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=94.79 E-value=0.39 Score=36.99 Aligned_cols=81 Identities=15% Similarity=0.059 Sum_probs=51.8
Q ss_pred EEEeccCCCCCCCCCccccCCCCC-CCeeEEee---eCCcCceEEEEC-------------------CeEEEecCCCCcE
Q 030401 34 VRTTLYPPCPEPERVIGITQHADY-SGITLLLE---CGNIPGLQVLKD-------------------GQWVTVIPVDGAI 90 (178)
Q Consensus 34 lr~~~Yp~~~~~~~~~g~~~H~D~-~~lTll~q---~~~~~GLqv~~~-------------------g~W~~v~~~~~~~ 90 (178)
.-.+.|++-.- ...|.+. +.++..+. +++.+-|.+.+. ..+..+.|.+|.+
T Consensus 105 ~W~~~~~~G~~------~~~H~H~~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~l 178 (216)
T 2rg4_A 105 IWINILPEGGV------HGSHIHPHSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDV 178 (216)
T ss_dssp EEEEEECTTCC------EEEECCTTCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEE
T ss_pred EEEEEcCCCCc------ccCccCCCCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCCeE
Confidence 45677765322 5556664 35554442 223344777652 4567899999999
Q ss_pred EEecchhHHHhccCcccCCCCCCCCCC-CCceEEEEEeeccCC
Q 030401 91 VANIGHIMEIMSNGIYKAPDHRAMVNR-FKERRSITTFCFPSS 132 (178)
Q Consensus 91 vvn~Gd~l~~~TnG~~~s~~HRV~~~~-~~~R~S~~~F~~p~~ 132 (178)
|+.-+. -.|.|.... +++|+||+|.+.+..
T Consensus 179 vlFpS~------------l~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 179 LLWESW------------LRHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp EEEETT------------SCEEECCCCSSSCEEEEEEEEEC--
T ss_pred EEECCC------------CEEeccCCCCCCCEEEEEEEeecCC
Confidence 997663 368887754 468999999988765
No 9
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=93.23 E-value=0.58 Score=36.59 Aligned_cols=88 Identities=14% Similarity=0.066 Sum_probs=57.6
Q ss_pred CCcceEEEeccCCCCCCCCCccccCCCCCC--------CeeEEeeeCCcCceEEEE-C----------CeEEEecCCCCc
Q 030401 29 EGLYEVRTTLYPPCPEPERVIGITQHADYS--------GITLLLECGNIPGLQVLK-D----------GQWVTVIPVDGA 89 (178)
Q Consensus 29 ~~~~~lr~~~Yp~~~~~~~~~g~~~H~D~~--------~lTll~q~~~~~GLqv~~-~----------g~W~~v~~~~~~ 89 (178)
.....+-+|+|++- .-++++|.|-. +.|+-+. ...=+.+.. . +..+.+...+|+
T Consensus 123 ~~~n~~LvN~Y~~G-----~d~i~~H~D~~~~~~~~~~IaslSLG--~~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gs 195 (238)
T 2iuw_A 123 HTFNSLLCNLYRNE-----KDSVDWHSDDEPSLGRCPIIASLSFG--ATRTFEMRKKPPPEENGDYTYVERVKIPLDHGT 195 (238)
T ss_dssp CCCCEEEEEEECST-----TCCEEEECCCCGGGCSSCCEEEEEEE--SCEEEEEEECCC--------CCCEEEEEECTTC
T ss_pred CCCCEEEEEEECCC-----CCceeCCcCChhhcCCCCcEEEEECC--CCEEEEEeccCCccccCcccCCceEEEEcCCCC
Confidence 34566789999873 23689999953 2222222 111233332 1 368899999999
Q ss_pred EEEecchhHHHhccCcccCCCCCCCCCCCCceEEEEEeec
Q 030401 90 IVANIGHIMEIMSNGIYKAPDHRAMVNRFKERRSITTFCF 129 (178)
Q Consensus 90 ~vvn~Gd~l~~~TnG~~~s~~HRV~~~~~~~R~S~~~F~~ 129 (178)
++|+-|++=..|..|.-+.. .....|+|+.|-..
T Consensus 196 llvM~G~~r~~w~H~I~~~~------~~~~~RIsLTfR~v 229 (238)
T 2iuw_A 196 LLIMEGATQADWQHRVPKEY------HSREPRVNLTFRTV 229 (238)
T ss_dssp EEEEEETHHHHEEEEECCCS------SCCCCEEEEEEECC
T ss_pred EEEEChhhhCccEecCCCcC------CCCCCEEEEEeeec
Confidence 99999999888887754321 13568999999654
No 10
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=92.93 E-value=0.21 Score=39.38 Aligned_cols=84 Identities=19% Similarity=0.305 Sum_probs=57.1
Q ss_pred ceEEEeccCCCCCCCCCccccCCCCCC-----CeeEEeeeCC------cCc-eEEEECC--eEEEecCCCCcEEEecchh
Q 030401 32 YEVRTTLYPPCPEPERVIGITQHADYS-----GITLLLECGN------IPG-LQVLKDG--QWVTVIPVDGAIVANIGHI 97 (178)
Q Consensus 32 ~~lr~~~Yp~~~~~~~~~g~~~H~D~~-----~lTll~q~~~------~~G-Lqv~~~g--~W~~v~~~~~~~vvn~Gd~ 97 (178)
..+.+.+|++. .-....|.|.. .+|+++.-++ .+| |+++.++ ....|.|..|.++++-.+.
T Consensus 117 ~e~~~~~Y~~~-----G~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~~ 191 (247)
T 2hbt_A 117 TKAMVACYPGN-----GTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDR 191 (247)
T ss_dssp CCEEEEEECSS-----SCCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECST
T ss_pred ceEEEEEecCC-----CCcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecCC
Confidence 34678888751 22367777762 5788776332 144 7888644 6789999999999976431
Q ss_pred HHHhccCcccCCCCCCCCCCCCceEEEEEeeccC
Q 030401 98 MEIMSNGIYKAPDHRAMVNRFKERRSITTFCFPS 131 (178)
Q Consensus 98 l~~~TnG~~~s~~HRV~~~~~~~R~S~~~F~~p~ 131 (178)
-.+|.|.. ..+.|+|++.++.-.
T Consensus 192 ----------~~~H~V~p-~~~~R~sit~W~~~~ 214 (247)
T 2hbt_A 192 ----------RNPHEVQP-AYATRYAITVWYFDA 214 (247)
T ss_dssp ----------TCCEEECC-BSSCEEEEEEEEEEH
T ss_pred ----------Cceeeecc-CCCEEEEEEEEEcCC
Confidence 15899875 567999999876543
No 11
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=92.75 E-value=0.51 Score=36.03 Aligned_cols=86 Identities=10% Similarity=-0.023 Sum_probs=54.4
Q ss_pred CCcceEEEeccCCCCCCCCCccccCCCCCC--------CeeEEeeeCCcCceEEEEC----------CeEEEecCCCCcE
Q 030401 29 EGLYEVRTTLYPPCPEPERVIGITQHADYS--------GITLLLECGNIPGLQVLKD----------GQWVTVIPVDGAI 90 (178)
Q Consensus 29 ~~~~~lr~~~Yp~~~~~~~~~g~~~H~D~~--------~lTll~q~~~~~GLqv~~~----------g~W~~v~~~~~~~ 90 (178)
.....+-+|+|.+- .-++++|.|-. ..++-+. ...=+.+... +....+...+|++
T Consensus 97 ~~~n~~LvN~Y~~G-----~d~i~~H~D~~~~~~~~~~IasvSLG--~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~Gsl 169 (204)
T 3s57_A 97 QTFNFVLINRYKDG-----SDHICEHRDDERELAPGSPIASVSFG--ASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSL 169 (204)
T ss_dssp CCCSEEEEEEESST-----TCCEEEECCCCTTBCTTCCEEEEEEE--SCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEE
T ss_pred CCCceeEEEEECCC-----CCcccceecChhhccCCCcEEEEECC--CceEEEEEEcCCCccccccCCceEEEECCCCCE
Confidence 34556779999873 23689999872 1122222 1222344331 2567888899999
Q ss_pred EEecchhHHHhccCcccCCCCCCCCCCCCceEEEEEe
Q 030401 91 VANIGHIMEIMSNGIYKAPDHRAMVNRFKERRSITTF 127 (178)
Q Consensus 91 vvn~Gd~l~~~TnG~~~s~~HRV~~~~~~~R~S~~~F 127 (178)
+|+-|++=..|..|.-+.. .....|+|+.|-
T Consensus 170 lvM~g~~q~~w~H~Ip~~~------~~~~~RislTFR 200 (204)
T 3s57_A 170 LMMNHPTNTHWYHSLPVRK------KVLAPRVNLTFR 200 (204)
T ss_dssp EEEETTHHHHEEEEECCCT------TCCSCEEEEEEE
T ss_pred EEECchhhheeEeeccccC------CCCCCEEEEEee
Confidence 9999998888876643211 124689999985
No 12
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=92.56 E-value=0.3 Score=37.57 Aligned_cols=111 Identities=15% Similarity=0.183 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHHCCCChhhHHHhhcCCcceEEEeccCCCCCCCCCccccCCCCC--------------CCeeEEeeeC-
Q 030401 3 KVATSLVRSMAMALELEAQEISDAYQEGLYEVRTTLYPPCPEPERVIGITQHADY--------------SGITLLLECG- 67 (178)
Q Consensus 3 ~l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~H~D~--------------~~lTll~q~~- 67 (178)
.+...|.+.|+..+|++... ...+++++|.+-.. ..+|.|. ..+|+++.-+
T Consensus 77 ~~~~~i~~ri~~~~gl~~~~--------~e~~qv~rY~~G~~------y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd 142 (224)
T 2jig_A 77 SVISKIEKRVAQVTMIPLEN--------HEGLQVLHYHDGQK------YEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTT 142 (224)
T ss_dssp HHHHHHHHHHHHHHTCCGGG--------BCCCEEEEEETTCC------EEEECCSSCCTTSSSCCCCSCEEEEEEEECSC
T ss_pred HHHHHHHHHHHHHhCCCccc--------ccceEEEecCCCcc------ccCcccCCCCccccccccCCCeEEEEEEEecC
Confidence 45677888888888887421 22477888876332 5667774 2477776522
Q ss_pred -CcCc-eEEEECC-------------eEEEecCCCCcEEEecchhHHHhccCcc-cCCCCCCCCCCCCceEEEEEeeccC
Q 030401 68 -NIPG-LQVLKDG-------------QWVTVIPVDGAIVANIGHIMEIMSNGIY-KAPDHRAMVNRFKERRSITTFCFPS 131 (178)
Q Consensus 68 -~~~G-Lqv~~~g-------------~W~~v~~~~~~~vvn~Gd~l~~~TnG~~-~s~~HRV~~~~~~~R~S~~~F~~p~ 131 (178)
..+| +.+...+ .-+.|.|..|.+|+.-- ...+|.. ..++|+|.......|+++..+++-.
T Consensus 143 ~~~GGeT~Fp~~~~~~~~~~~~~c~~~~~~V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~~ 218 (224)
T 2jig_A 143 VEEGGETVLPNAEQKVTGDGWSECAKRGLAVKPIKGDALMFYS----LKPDGSNDPASLHGSCPTLKGDKWSATKWIHVA 218 (224)
T ss_dssp CSEECCEEETTSSSCCCSTTSCTTGGGSEEECCCTTCEEEEES----BCTTSCBCGGGCEEECCEEESEEEEEEEEEESS
T ss_pred CCCCCceeCCCcccccccccccccccCceEEecccCcEEEEEe----eCCCCCCCCCCcccCCccccceEEEEEEeEEcC
Confidence 2333 4443211 14789999999887643 1223432 5789999765567899999887644
No 13
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=91.71 E-value=0.58 Score=36.16 Aligned_cols=108 Identities=15% Similarity=0.073 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHHHCCCChhhHHHhhcCCcceEEEeccCCCCCCCCCccccCCCCCC-----------CeeEEeeeCC--c
Q 030401 3 KVATSLVRSMAMALELEAQEISDAYQEGLYEVRTTLYPPCPEPERVIGITQHADYS-----------GITLLLECGN--I 69 (178)
Q Consensus 3 ~l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~H~D~~-----------~lTll~q~~~--~ 69 (178)
.+...|.+-++..+|++.+ ....+++.+|.+-.. ..+|.|.. .+|+++.-++ .
T Consensus 90 ~~v~~i~~Ri~~~~gl~~~--------~~E~lqv~~Y~~G~~------y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~ 155 (216)
T 3itq_A 90 ELTAKIEKRISSIMNVPAS--------HGEGLHILNYEVDQQ------YKAHYDYFAEHSRSAANNRISTLVMYLNDVEE 155 (216)
T ss_dssp HHHHHHHHHHHHHHTSCGG--------GBCCCEEEEECBTCC------EEEECSSCCTTSGGGGGCEEEEEEEECSCCSE
T ss_pred HHHHHHHHHHHHhcCceec--------cccceeEEEeCCCCc------cccccCCCcCCCcccCCceEEEEEEecccCCc
Confidence 3556777778888888632 123478888876433 66777764 3677776322 2
Q ss_pred Cc-eEEEECCeEEEecCCCCcEEEecchhHHHhccCc-ccCCCCCCCCCCCCceEEEEEeecc
Q 030401 70 PG-LQVLKDGQWVTVIPVDGAIVANIGHIMEIMSNGI-YKAPDHRAMVNRFKERRSITTFCFP 130 (178)
Q Consensus 70 ~G-Lqv~~~g~W~~v~~~~~~~vvn~Gd~l~~~TnG~-~~s~~HRV~~~~~~~R~S~~~F~~p 130 (178)
+| +.+..-+ +.|.|..|.+++.-. ...+|. -..++|++.......|+++..+++-
T Consensus 156 GGeT~Fp~~~--~~V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~~ 212 (216)
T 3itq_A 156 GGETFFPKLN--LSVHPRKGMAVYFEY----FYQDQSLNELTLHGGAPVTKGEKWIATQWVRR 212 (216)
T ss_dssp ECCEEETTTT--EEECCCTTCEEEEEC----CCSSHHHHHTTCEEECCEEESCEEEEEEEEES
T ss_pred CceeEecCCC--CEEecCCCeEEEEec----cCCCCCCCCccccccceeccccEEEEEeeEec
Confidence 33 3332222 678999999887543 112232 2467999976556789999888753
No 14
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=89.12 E-value=0.92 Score=37.55 Aligned_cols=108 Identities=18% Similarity=0.123 Sum_probs=68.1
Q ss_pred CcceEEEeccCCCCCCCCCccccCCCCCC------CeeEEeeeCCcCceEEEE-CCeEEEecCCCCcEEEecchhHHHhc
Q 030401 30 GLYEVRTTLYPPCPEPERVIGITQHADYS------GITLLLECGNIPGLQVLK-DGQWVTVIPVDGAIVANIGHIMEIMS 102 (178)
Q Consensus 30 ~~~~lr~~~Yp~~~~~~~~~g~~~H~D~~------~lTll~q~~~~~GLqv~~-~g~W~~v~~~~~~~vvn~Gd~l~~~T 102 (178)
....+-+|+|.+- .++++|.|.. ..|+-+. ...=+.+.. +|.+..+...+++++|+-|+.=..|.
T Consensus 196 ~~n~~lvN~Y~~G------~~I~~H~D~~~~~~~~I~slSLG--~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~w~ 267 (345)
T 3tht_A 196 KPDQMTINQYEPG------QGIPAHIDTHSAFEDEIVSLSLG--SEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLWT 267 (345)
T ss_dssp CCSEEEEEEECTT------CCEEEECCCTTTBCSCEEEEEES--SCEEEEEECTTSCEEEEEECTTEEEEECTHHHHTSE
T ss_pred CCCEEEEEEecCC------CCEeeccCCchhcCCeEEEEECC--CceeEEEccCCCceEEEEcCCCcEEEEChHHhhceE
Confidence 4566789999772 2799999984 2222221 122233443 57789999999999999999999997
Q ss_pred cCcccCCCCCCC------------------CCCCCceEEEEEeeccCCCcEEecCccccCCC
Q 030401 103 NGIYKAPDHRAM------------------VNRFKERRSITTFCFPSSSVKIGPAKEFTKSG 146 (178)
Q Consensus 103 nG~~~s~~HRV~------------------~~~~~~R~S~~~F~~p~~d~~i~p~~~~~~~~ 146 (178)
.|.-+-...-+- ..+...|+|+.|=..+...+.. ..+++++..
T Consensus 268 H~I~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~~~c~C-~~~~~cd~~ 328 (345)
T 3tht_A 268 HGITCRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQTPCNC-SYPLVCDSQ 328 (345)
T ss_dssp EEECCCSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCSSCCCC-SCTTTCTTT
T ss_pred ccCCcccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCCCCcCC-CCCCcccCC
Confidence 774442222110 0123569999999877764322 345666643
No 15
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=88.36 E-value=5 Score=30.71 Aligned_cols=80 Identities=15% Similarity=0.091 Sum_probs=50.2
Q ss_pred ceEEEeccCCCCCCCCCccccCCCCC-C------CeeEEeeeCCcCceEEEE---CCeEEEecCCCCcEEEecchhHHHh
Q 030401 32 YEVRTTLYPPCPEPERVIGITQHADY-S------GITLLLECGNIPGLQVLK---DGQWVTVIPVDGAIVANIGHIMEIM 101 (178)
Q Consensus 32 ~~lr~~~Yp~~~~~~~~~g~~~H~D~-~------~lTll~q~~~~~GLqv~~---~g~W~~v~~~~~~~vvn~Gd~l~~~ 101 (178)
..+-+|+|.+- . ++++|.|. . ++++-+. ...=+.+.. ++....+...+|+++|+-|+.- .|
T Consensus 105 n~~LvN~Y~~G-----~-~i~~H~D~~e~~~~~pI~svSLG--~~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~r-~~ 175 (211)
T 3i3q_A 105 DACLINRYAPG-----A-KLSLHQDKDEPDLRAPIVSVSLG--LPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESR-LF 175 (211)
T ss_dssp CEEEEEEECTT-----C-CEEEECCCCCSCTTSCEEEEEEE--SCEEEEECCSSTTSCCEEEEECTTCEEEECGGGT-TC
T ss_pred CEEEEEEEcCC-----C-CcccccCCCccccCCCEEEEECC--CCeEEEEecccCCCceEEEECCCCCEEEECchHH-ce
Confidence 56789999872 3 79999993 1 2222222 122233432 3568889999999999988773 24
Q ss_pred ccCcccCCCCCCCCCC-------CCceEEEEEee
Q 030401 102 SNGIYKAPDHRAMVNR-------FKERRSITTFC 128 (178)
Q Consensus 102 TnG~~~s~~HRV~~~~-------~~~R~S~~~F~ 128 (178)
. |.|.... ...|+|+.|-.
T Consensus 176 ~--------H~I~~~~~~~~p~~~~~RIsLTFR~ 201 (211)
T 3i3q_A 176 Y--------HGIQPLKAGFHPLTIDCRYNLTFRQ 201 (211)
T ss_dssp C--------EEECCCCCCCBTTTBTCEEEEEEEC
T ss_pred E--------eccCcccCCcCCCCCCCEEEEEeee
Confidence 3 4443322 24699999864
No 16
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=56.09 E-value=10 Score=22.34 Aligned_cols=22 Identities=18% Similarity=0.214 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHCCCChhhH
Q 030401 2 RKVATSLVRSMAMALELEAQEI 23 (178)
Q Consensus 2 ~~l~~~ll~~l~~~Lgl~~~~~ 23 (178)
.+++..|.+++++.||.++++.
T Consensus 18 ~~l~~~lt~~l~~~lg~~~~~v 39 (64)
T 3abf_A 18 RELVRRLTEMASRLLGEPYEEV 39 (64)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGE
T ss_pred HHHHHHHHHHHHHHhCCCcccE
Confidence 4688999999999999997643
No 17
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=54.84 E-value=8.5 Score=22.35 Aligned_cols=21 Identities=5% Similarity=0.164 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHHCCCChhh
Q 030401 2 RKVATSLVRSMAMALELEAQE 22 (178)
Q Consensus 2 ~~l~~~ll~~l~~~Lgl~~~~ 22 (178)
.+++..|.+++++.||.|+++
T Consensus 20 ~~l~~~l~~~l~~~lg~p~~~ 40 (63)
T 2x4k_A 20 KNLVSEVTDAVEKTTGANRQA 40 (63)
T ss_dssp HHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHhCcCccc
Confidence 468999999999999999764
No 18
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=50.01 E-value=13 Score=29.90 Aligned_cols=64 Identities=14% Similarity=0.109 Sum_probs=41.0
Q ss_pred ccCCCCC--------CCeeEEeeeCCcCceEEEECCeEEEecCCCCcEEEecchhHHHhccCcccCCCCCCCCCCCCceE
Q 030401 51 ITQHADY--------SGITLLLECGNIPGLQVLKDGQWVTVIPVDGAIVANIGHIMEIMSNGIYKAPDHRAMVNRFKERR 122 (178)
Q Consensus 51 ~~~H~D~--------~~lTll~q~~~~~GLqv~~~g~W~~v~~~~~~~vvn~Gd~l~~~TnG~~~s~~HRV~~~~~~~R~ 122 (178)
+.+|.|. +.+.+...-.+.+|..+..+|+-+..++ ..++.+| -+..|+|.+.++.+|+
T Consensus 104 I~~HrD~~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~~~~m~~-GE~w~~d-------------~~~~H~v~N~g~~~RI 169 (290)
T 1e5r_A 104 VIPHRDFVELDREVDRYFRTFMVLEDSPLAFHSNEDTVIHMRP-GEIWFLD-------------AATVHSAVNFSEISRQ 169 (290)
T ss_dssp EEEECCC--------CBCCEEEECSCCTTEEEEETTEEECCCT-TEEEECC-------------TTSCEEEEESSSSCCC
T ss_pred eeCccCccccccccCCceEEEeeEecCCCcEEEECCEEEecCC-CCEEEEc-------------CCCeeEEEcCCCCCeE
Confidence 7888888 2344444333567777777776655555 2223332 2458999999999999
Q ss_pred EEEEee
Q 030401 123 SITTFC 128 (178)
Q Consensus 123 S~~~F~ 128 (178)
.+.+=+
T Consensus 170 hLv~D~ 175 (290)
T 1e5r_A 170 SLCVDF 175 (290)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 998654
No 19
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=44.25 E-value=16 Score=21.17 Aligned_cols=20 Identities=5% Similarity=0.154 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHHHCCCChh
Q 030401 2 RKVATSLVRSMAMALELEAQ 21 (178)
Q Consensus 2 ~~l~~~ll~~l~~~Lgl~~~ 21 (178)
.+++..|.+++.+.||++++
T Consensus 17 ~~l~~~i~~~l~~~lg~~~~ 36 (61)
T 2opa_A 17 RNLVEKVTEAVKETTGASEE 36 (61)
T ss_dssp HHHHHHHHHHHHHHHCCCGG
T ss_pred HHHHHHHHHHHHHHhCcCcC
Confidence 46889999999999999975
No 20
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=43.62 E-value=65 Score=28.74 Aligned_cols=81 Identities=19% Similarity=0.136 Sum_probs=49.7
Q ss_pred eEEEeccCCCCCCCCCccccCCCCCC---CeeEEeeeCC---------cCceEEEEC--------CeEEEecCCCCcEEE
Q 030401 33 EVRTTLYPPCPEPERVIGITQHADYS---GITLLLECGN---------IPGLQVLKD--------GQWVTVIPVDGAIVA 92 (178)
Q Consensus 33 ~lr~~~Yp~~~~~~~~~g~~~H~D~~---~lTll~q~~~---------~~GLqv~~~--------g~W~~v~~~~~~~vv 92 (178)
-+.++.|++-. ....|.|.- .+|+++.-+. .+-|+++.. .....+.|..|.+++
T Consensus 125 D~~~a~Y~~G~------fL~~H~D~~~~RrvS~VLYLN~pd~~W~~e~GGeL~Lyd~d~~~~P~~d~~~~I~P~fNrLV~ 198 (633)
T 3kt7_A 125 DMSINTYTKGC------HLLTHDDVIGSRRISFILYLPDPDRKWKSHYGGGLRLFPSILPNVPHSDPSAKLVPQFNQIAF 198 (633)
T ss_dssp CEEEEEECTTC------EEEEECCCCTTEEEEEEEECSCTTSCCCGGGBCCEEECCEEETTEECSSCSEEECCCTTEEEE
T ss_pred eEEEEEeCCCC------eeeecCCCCCCeEEEEEEEcCCCCCCCCccCCceEEEecCCCcCCCCCCceEEEecCCCeEEE
Confidence 36678887632 378888852 3566654121 333888852 136678999999988
Q ss_pred ecchhHHHhcc-CcccCCCCCCCCC-CCCceEEEEEeec
Q 030401 93 NIGHIMEIMSN-GIYKAPDHRAMVN-RFKERRSITTFCF 129 (178)
Q Consensus 93 n~Gd~l~~~Tn-G~~~s~~HRV~~~-~~~~R~S~~~F~~ 129 (178)
+.- . + ...|.|... .++.|+||+-.++
T Consensus 199 F~v-------sp~---~S~H~V~eV~~~~~RlSItGWF~ 227 (633)
T 3kt7_A 199 FKV-------LPG---FSFHDXEEVKVDKHRLSIQGWYH 227 (633)
T ss_dssp EEC-------CTT---TCCEEECCBCSSCCEEEEEEEEE
T ss_pred EEc-------CCC---CCcCCCCccCCCCCEEEEEEEec
Confidence 643 2 1 245654221 1789999985554
No 21
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=42.72 E-value=18 Score=20.90 Aligned_cols=20 Identities=15% Similarity=0.250 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHHCCCChh
Q 030401 2 RKVATSLVRSMAMALELEAQ 21 (178)
Q Consensus 2 ~~l~~~ll~~l~~~Lgl~~~ 21 (178)
.+++..|.+++.+.||++++
T Consensus 17 ~~l~~~i~~~l~~~lg~p~~ 36 (62)
T 1otf_A 17 ETLIRQVSEAMANSLDAPLE 36 (62)
T ss_dssp HHHHHHHHHHHHHHHTCCGG
T ss_pred HHHHHHHHHHHHHHhCcCcc
Confidence 46889999999999999975
No 22
>2ww6_A Fibritin, T4 fibritin; D-amino acids, chaperone, viral protein; HET: DPN PG4; 0.98A {Enterobacteria phage T4} PDB: 1rfo_A 1u0p_A 2kbl_A 2ww7_A*
Probab=39.11 E-value=24 Score=17.79 Aligned_cols=16 Identities=31% Similarity=0.397 Sum_probs=11.5
Q ss_pred cCc-eEEEECCeEEEec
Q 030401 69 IPG-LQVLKDGQWVTVI 84 (178)
Q Consensus 69 ~~G-Lqv~~~g~W~~v~ 84 (178)
..| ..|.++|.|+...
T Consensus 8 ~Dg~~Yvr~dg~WV~l~ 24 (27)
T 2ww6_A 8 RDAQAYVRKFGEWVLLS 24 (27)
T ss_dssp SSSCEEEEETTEEEEGG
T ss_pred cCcceeEEEcCeEEEcc
Confidence 344 5677899999754
No 23
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=35.09 E-value=30 Score=20.46 Aligned_cols=21 Identities=10% Similarity=0.115 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHCCCChhh
Q 030401 2 RKVATSLVRSMAMALELEAQE 22 (178)
Q Consensus 2 ~~l~~~ll~~l~~~Lgl~~~~ 22 (178)
++|+..|.+++.+.||++++.
T Consensus 17 ~~L~~~it~~~~~~lg~p~~~ 37 (65)
T 3ry0_A 17 AALGEALTAAAHETLGTPVEA 37 (65)
T ss_dssp HHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHhCcCccc
Confidence 478999999999999999753
No 24
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=34.07 E-value=27 Score=20.55 Aligned_cols=21 Identities=14% Similarity=0.189 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHHCCCChhh
Q 030401 2 RKVATSLVRSMAMALELEAQE 22 (178)
Q Consensus 2 ~~l~~~ll~~l~~~Lgl~~~~ 22 (178)
.+|+..|.+++++.||++++.
T Consensus 16 ~~L~~~it~~~~~~lg~~~~~ 36 (62)
T 3m20_A 16 REFVERLTSVAAEIYGMDRSA 36 (62)
T ss_dssp HHHHHHHHHHHHHHHTCCTTS
T ss_pred HHHHHHHHHHHHHHhCcCcce
Confidence 468899999999999998643
No 25
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=32.95 E-value=34 Score=20.39 Aligned_cols=21 Identities=10% Similarity=0.147 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHHCCCChhh
Q 030401 2 RKVATSLVRSMAMALELEAQE 22 (178)
Q Consensus 2 ~~l~~~ll~~l~~~Lgl~~~~ 22 (178)
.+|+..|.+++++.||++++.
T Consensus 20 ~~l~~~lt~~l~~~lg~p~~~ 40 (67)
T 3m21_A 20 QQLIEGVSDLMVKVLNKNKAS 40 (67)
T ss_dssp HHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHCcCccc
Confidence 468899999999999998653
No 26
>1gyx_A YDCE, B1461, hypothetical protein YDCE; tautomerase, isomerase, complete proteo; HET: EPE; 1.35A {Escherichia coli} SCOP: d.80.1.1 PDB: 1gyj_A* 1gyy_A*
Probab=32.62 E-value=31 Score=21.20 Aligned_cols=21 Identities=10% Similarity=0.147 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHHCCCChhh
Q 030401 2 RKVATSLVRSMAMALELEAQE 22 (178)
Q Consensus 2 ~~l~~~ll~~l~~~Lgl~~~~ 22 (178)
++++..|.+++.+.||++++.
T Consensus 18 ~~L~~~l~~~l~~~lgip~~~ 38 (76)
T 1gyx_A 18 AALAADITDVIIRHLNSKDSS 38 (76)
T ss_dssp HHHHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHHHHHHHHhCcCCce
Confidence 468999999999999999753
No 27
>3mb2_A 4-oxalocrotonate tautomerase family enzyme - ALPH; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=32.15 E-value=34 Score=20.72 Aligned_cols=21 Identities=24% Similarity=0.332 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHCCCChhh
Q 030401 2 RKVATSLVRSMAMALELEAQE 22 (178)
Q Consensus 2 ~~l~~~ll~~l~~~Lgl~~~~ 22 (178)
.+|+..|.+++++.||.+++.
T Consensus 18 ~~L~~~it~~l~~~lg~p~~~ 38 (72)
T 3mb2_A 18 AELARALSAAAAAAFDVPLAE 38 (72)
T ss_dssp HHHHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHHHHHHHHhCCCccc
Confidence 478899999999999999754
No 28
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=29.03 E-value=59 Score=24.41 Aligned_cols=44 Identities=9% Similarity=0.012 Sum_probs=32.1
Q ss_pred cEEEecchhHHHhccCccc----CCCCCCCCCCCCceEEEEE-eeccCC
Q 030401 89 AIVANIGHIMEIMSNGIYK----APDHRAMVNRFKERRSITT-FCFPSS 132 (178)
Q Consensus 89 ~~vvn~Gd~l~~~TnG~~~----s~~HRV~~~~~~~R~S~~~-F~~p~~ 132 (178)
...+.+|+.-..|..|..- |-.|.|.+.++..|+-+.+ |.+|..
T Consensus 138 ~~~i~V~~~~~~w~eGe~~~fDds~~Hev~N~~d~~RvvL~~D~~rPdl 186 (197)
T 3rcq_A 138 GCKIRCANETKTWEEGKVLIFDDSFEHEVWQDASSFRLIFIVDVWHPEL 186 (197)
T ss_dssp SEEEEETTEEECCCBTCEEEECTTSCEEEEECSSSCEEEEEEEEECTTS
T ss_pred CcEEEECCEEEEeeCCcEEEEcCCeEEEEEECCCCCEEEEEEeeeCCCC
Confidence 3445677777788888553 7789999988889988765 555554
No 29
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=27.59 E-value=21 Score=28.26 Aligned_cols=21 Identities=10% Similarity=0.270 Sum_probs=17.3
Q ss_pred CCCCccccCCCCCCCeeEEee
Q 030401 45 PERVIGITQHADYSGITLLLE 65 (178)
Q Consensus 45 ~~~~~g~~~H~D~~~lTll~q 65 (178)
+....+.-+|.++..+|.+++
T Consensus 48 ~~~gf~~HPHrg~EtVTyvl~ 68 (277)
T 2p17_A 48 ERGTFDVHPHRGIETVTYVIS 68 (277)
T ss_dssp CTTCCCCEEECSEEEEEEEEE
T ss_pred CCCCCCCCCCCCcEEEEEEEE
Confidence 334677889999999999997
No 30
>3ej9_A Alpha-subunit of trans-3-chloroacrylic acid dehal; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, isomerase, hydrolase; 1.50A {Pseudomonas pavonaceae} SCOP: d.80.1.1 PDB: 3ej3_A 1s0y_A 3ej7_A
Probab=26.22 E-value=44 Score=20.60 Aligned_cols=21 Identities=19% Similarity=0.292 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHHHCCCChhh
Q 030401 2 RKVATSLVRSMAMALELEAQE 22 (178)
Q Consensus 2 ~~l~~~ll~~l~~~Lgl~~~~ 22 (178)
.+|+..|.+++++.||++++.
T Consensus 18 ~~L~~~it~~l~~~lg~p~~~ 38 (76)
T 3ej9_A 18 RALSAGLLRVISEATGEPREN 38 (76)
T ss_dssp HHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHCcCccc
Confidence 468899999999999999753
No 31
>2xcz_A Possible ATLS1-like light-inducible protein; cytokine, tautomerase, immune system, cyanobacterium; 1.64A {Prochlorococcus marinus}
Probab=22.88 E-value=58 Score=21.50 Aligned_cols=21 Identities=14% Similarity=0.090 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHHCCCChhh
Q 030401 2 RKVATSLVRSMAMALELEAQE 22 (178)
Q Consensus 2 ~~l~~~ll~~l~~~Lgl~~~~ 22 (178)
.++...+-+++++.||.|+++
T Consensus 17 ~~l~~~~~~~l~~~lgkp~~~ 37 (115)
T 2xcz_A 17 NSLLQELSSKLAELLGKPEKY 37 (115)
T ss_dssp HHHHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHHHHHHHHHCCChHH
Confidence 468889999999999999874
No 32
>3djh_A Macrophage migration inhibitory factor; homotrimer, cytokine, inflammatory response, isomerase, phosphoprotein; 1.25A {Homo sapiens} SCOP: d.80.1.3 PDB: 1ca7_A* 1ljt_A* 2ooh_A* 2ooz_A* 3b9s_A* 2oow_A* 3ce4_A 3dji_A* 3ijg_A* 3ijj_A* 3smb_A* 3smc_A* 3u18_A* 4f2k_A* 1gd0_A* 1gcz_A* 3jsf_A* 3jsg_A* 3jtu_A* 3l5p_A* ...
Probab=22.62 E-value=52 Score=21.89 Aligned_cols=21 Identities=19% Similarity=0.245 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHHCCCChhh
Q 030401 2 RKVATSLVRSMAMALELEAQE 22 (178)
Q Consensus 2 ~~l~~~ll~~l~~~Lgl~~~~ 22 (178)
++++..|.+.+.+.||++++.
T Consensus 73 ~~~s~~i~~~l~~~Lgi~~~r 93 (114)
T 3djh_A 73 RSYSKLLCGLLAERLRISPDR 93 (114)
T ss_dssp HHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHhCcCcce
Confidence 468899999999999999753
No 33
>3b64_A Macrophage migration inhibitory factor-like protein; cytokine, MIF, LM1740MIF, lmmif, unknown function; 1.03A {Leishmania major}
Probab=22.11 E-value=72 Score=20.92 Aligned_cols=21 Identities=14% Similarity=0.126 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHH-HHCCCChhh
Q 030401 2 RKVATSLVRSMA-MALELEAQE 22 (178)
Q Consensus 2 ~~l~~~ll~~l~-~~Lgl~~~~ 22 (178)
.+++..+-++++ +.||.|+++
T Consensus 16 ~~l~~~~~~~l~~~~~gkPe~~ 37 (112)
T 3b64_A 16 RENLAQVYRAVTRDVLGKPEDL 37 (112)
T ss_dssp HHHHHHHHHHHHHHTSCSCGGG
T ss_pred HHHHHHHHHHHHHHHhCCCHHH
Confidence 467889999999 999999874
No 34
>3fym_A Putative uncharacterized protein; HTH DNA binding, DNA binding protein; 1.00A {Staphylococcus aureus subsp}
Probab=22.07 E-value=90 Score=21.21 Aligned_cols=24 Identities=21% Similarity=0.423 Sum_probs=19.4
Q ss_pred HHHHHHHHHHCCCChhhHHHhhcC
Q 030401 6 TSLVRSMAMALELEAQEISDAYQE 29 (178)
Q Consensus 6 ~~ll~~l~~~Lgl~~~~~~~~~~~ 29 (178)
...++.+|+.||++.+++.+.++.
T Consensus 51 ~~~l~~ia~~L~v~~~~l~~~~~~ 74 (130)
T 3fym_A 51 EGFIRKYASVVNIEPNQLIQAHQD 74 (130)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHTTT
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHH
Confidence 467899999999999887776543
No 35
>2wus_R RODZ, putative uncharacterized protein; structural protein, cell WALL morphogenesis, bacterial cytos bacterial actin; 2.90A {Thermotoga maritima}
Probab=21.36 E-value=90 Score=20.78 Aligned_cols=23 Identities=26% Similarity=0.404 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHCCCChhhHHHhh
Q 030401 5 ATSLVRSMAMALELEAQEISDAY 27 (178)
Q Consensus 5 ~~~ll~~l~~~Lgl~~~~~~~~~ 27 (178)
+..+++.+|..||++.+.+...+
T Consensus 54 ~~~~l~~iA~~Lgv~~~~L~~~~ 76 (112)
T 2wus_R 54 IKSYIKRYSEFLELSPDEMLKLY 76 (112)
T ss_dssp HHHHHHHHHHHSSCCHHHHHHHH
T ss_pred HHHHHHHHHHHhCcCHHHHHHHH
Confidence 56788999999999988776554
No 36
>4hti_A Receptor-type tyrosine-protein phosphatase N2; phogrin, IA-2BETA, protein-tyrosine phosphatase, transmembra protein, diabetes, autoimmunity; 1.95A {Homo sapiens} PDB: 4htj_A
Probab=20.93 E-value=63 Score=21.64 Aligned_cols=33 Identities=15% Similarity=0.203 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHCCCChhhHHHhh-cCCcceEEEe
Q 030401 5 ATSLVRSMAMALELEAQEISDAY-QEGLYEVRTT 37 (178)
Q Consensus 5 ~~~ll~~l~~~Lgl~~~~~~~~~-~~~~~~lr~~ 37 (178)
+.+|++.+|+.|+++..+|.+.- ..+.-.+|+.
T Consensus 26 G~~l~~~la~~l~l~~~~F~~isV~g~aVTFrV~ 59 (99)
T 4hti_A 26 GRRLVEDVARLLQVPSSAFADVEVLGPAVTFKVS 59 (99)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEEEETTEEEEEEC
T ss_pred HHHHHHHHHHHhCCchhheeeeeecCceEEEEec
Confidence 67899999999999988887654 3344455553
No 37
>2qt7_A Receptor-type tyrosine-protein phosphatase-like N; IA-2, ICA-512, protein-tyrosine phosphatase, transmembrane protein, diabetes, autoimmunity; 1.30A {Homo sapiens} PDB: 3n01_A 3np5_A 3ng8_A 3n4w_A
Probab=20.92 E-value=48 Score=21.89 Aligned_cols=32 Identities=9% Similarity=0.113 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHCCCChhhHHHhh-cCCcceEEE
Q 030401 5 ATSLVRSMAMALELEAQEISDAY-QEGLYEVRT 36 (178)
Q Consensus 5 ~~~ll~~l~~~Lgl~~~~~~~~~-~~~~~~lr~ 36 (178)
+.+|++.+|+.|++|..+|.+.- ..+.-.+|+
T Consensus 19 G~~l~~~la~ll~l~~~~Ft~i~V~g~aVTFrV 51 (91)
T 2qt7_A 19 GVKLLEILAEHVHMSSGSFINISVVGPALTFRI 51 (91)
T ss_dssp HHHHHHHHHHHHTSCGGGEEEEEEETTEEEEEE
T ss_pred HHHHHHHHHHHhcCCccceeeeEeecceEEEEe
Confidence 67899999999999998887764 334445555
No 38
>2wkb_A Macrophage migration inhibitory factor; cytokine; HET: CME; 1.78A {Plasmodium berghei} PDB: 3gad_A 3gac_A 2wkf_A*
Probab=20.84 E-value=48 Score=22.45 Aligned_cols=21 Identities=5% Similarity=0.048 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHHHCCCChhh
Q 030401 2 RKVATSLVRSMAMALELEAQE 22 (178)
Q Consensus 2 ~~l~~~ll~~l~~~Lgl~~~~ 22 (178)
.+++..+-+++++.||.|+++
T Consensus 17 ~~l~~~l~~ala~~lgkPe~~ 37 (125)
T 2wkb_A 17 QNTLSEIEDAISNILGKPVAY 37 (125)
T ss_dssp HHHHHHHHHHHHHHHCSCCTT
T ss_pred HHHHHHHHHHHHHHhCCCHHH
Confidence 467889999999999999873
No 39
>4dh4_A MIF; trimer, isomerase; 1.82A {Toxoplasma gondii}
Probab=20.63 E-value=66 Score=21.26 Aligned_cols=20 Identities=20% Similarity=0.220 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHCCCChh
Q 030401 2 RKVATSLVRSMAMALELEAQ 21 (178)
Q Consensus 2 ~~l~~~ll~~l~~~Lgl~~~ 21 (178)
++++..|.+.+.+.||++++
T Consensus 74 ~~l~~~i~~~l~~~Lgi~~~ 93 (114)
T 4dh4_A 74 CKIAAALSAACERHLGVPKN 93 (114)
T ss_dssp HHHHHHHHHHHHHHHCCCGG
T ss_pred HHHHHHHHHHHHHHhCcCcc
Confidence 46889999999999999875
Done!