BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030403
(178 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255556067|ref|XP_002519068.1| 50S ribosomal protein L21, mitochondrial precursor, putative
[Ricinus communis]
gi|223541731|gb|EEF43279.1| 50S ribosomal protein L21, mitochondrial precursor, putative
[Ricinus communis]
Length = 268
Score = 155 bits (391), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 95/188 (50%), Positives = 116/188 (61%), Gaps = 27/188 (14%)
Query: 1 MAHRRCLHVLSRHAAALLS-----LKTPPTLP-FSTSISLKGLTPFQHRSLISSTLGPTN 54
MA RR LH L+R A++S L LP F +S+S+K L SLI + T
Sbjct: 1 MAQRRRLHSLTRQVIAIISSNPTQLHHTVKLPSFPSSLSIKTL----RSSLIFTNTNATC 56
Query: 55 ---WSHY-----RHFSSNKNDDEGEDVDEDEDEDEETADESYEGEEIGDTVPDLGREYTL 106
WSH+ R+FSS+ D D ED+ D + GEE+ ++ DL REYTL
Sbjct: 57 HSLWSHHHHRNHRYFSSDYGDKSENDETEDDGSDSD-------GEEVTES--DLKREYTL 107
Query: 107 EEKEAEAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEV 166
+EKE EAA IGYKV+GPL S+RV K YEP FAV+QIGSHQFKVSNGD IFTERLKFC+V
Sbjct: 108 QEKEEEAAAIGYKVIGPLGDSERVIKAYEPVFAVIQIGSHQFKVSNGDCIFTERLKFCDV 167
Query: 167 NDKLSFER 174
NDKL +
Sbjct: 168 NDKLILNK 175
>gi|313585316|gb|ADR70863.1| mitochondrial 50S ribosomal protein L21 [Hevea brasiliensis]
Length = 271
Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/186 (54%), Positives = 118/186 (63%), Gaps = 20/186 (10%)
Query: 1 MAHRRCLHVLSRHAAALLSLKTPPTL--PFSTSISLKGLTPFQHRSLISS----TLGPTN 54
MA RRCLH L+R A ALLS P TL P + S L + + S T +
Sbjct: 1 MAQRRCLHTLTRQAIALLS-SNPTTLYHPCKVAASFPNLNSVKALLICKSSHVFTKADSI 59
Query: 55 WS------HYRHFSSNKNDDEGEDVDEDEDEDEETADESYEGEEIGDTVPDLGREYTLEE 108
W H R+FSS + D E++DEDEETA E +GEE+ + DL REYT EE
Sbjct: 60 WCSFWPYHHRRYFSS-----DSRDESENDDEDEETAGEDSDGEEVKGS--DLKREYTAEE 112
Query: 109 KEAEAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVND 168
KE EAA IGYKV+GPL+KSD VFK YEP FAVVQIGSHQFKVSNGD IFTE+LKFCEVND
Sbjct: 113 KEEEAAAIGYKVVGPLQKSDLVFKPYEPVFAVVQIGSHQFKVSNGDCIFTEKLKFCEVND 172
Query: 169 KLSFER 174
KL +
Sbjct: 173 KLILNK 178
>gi|449452985|ref|XP_004144239.1| PREDICTED: 50S ribosomal protein L21, mitochondrial-like [Cucumis
sativus]
Length = 270
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/180 (54%), Positives = 118/180 (65%), Gaps = 7/180 (3%)
Query: 1 MAHRRCLHVLSRHAAALLSLKTPPTLPFSTSISLKGLTPFQHRSL---ISSTLGP---TN 54
MA+RRCL VL+RHA+A+ S K P P T+ S H SL +S+ P T
Sbjct: 1 MANRRCLQVLTRHASAIFSTK-PYIHPLKTAPSFLSQNFRTHASLSNCLSAKTDPSLCTY 59
Query: 55 WSHYRHFSSNKNDDEGEDVDEDEDEDEETADESYEGEEIGDTVPDLGREYTLEEKEAEAA 114
W H R+ SS+ + +D EDEDEDE+ E + I + + +EYT EE EAEAA
Sbjct: 60 WPHTRYLSSDSRNGSEDDFTEDEDEDEDDEAYDSEDDGISTSSRVMKKEYTKEEMEAEAA 119
Query: 115 EIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLSFER 174
IGYKVLGPL +S+ VFK YEPAFAVVQIGSHQFKVSNGDSIFTERLKFC+VNDKL +
Sbjct: 120 AIGYKVLGPLDQSEGVFKPYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNK 179
>gi|449489339|ref|XP_004158283.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosomal protein L21,
mitochondrial-like [Cucumis sativus]
Length = 270
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/180 (54%), Positives = 118/180 (65%), Gaps = 7/180 (3%)
Query: 1 MAHRRCLHVLSRHAAALLSLKTPPTLPFSTSISLKGLTPFQHRSL---ISSTLGP---TN 54
MA+RRCL VL+RHA+A+ S K P P T+ S H SL +S+ P T
Sbjct: 1 MANRRCLQVLTRHASAIFSTK-PYIHPLKTAPSFLSQNFRTHASLSNCLSAKTDPSLCTY 59
Query: 55 WSHYRHFSSNKNDDEGEDVDEDEDEDEETADESYEGEEIGDTVPDLGREYTLEEKEAEAA 114
W H R+ SS+ + +D EDEDEDE+ E + I + + +EYT EE EAEAA
Sbjct: 60 WPHTRYLSSDSRNGSEDDFTEDEDEDEDDEAYDSEDDGISTSSRVMKKEYTKEEMEAEAA 119
Query: 115 EIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLSFER 174
IGYKVLGPL +S+ VFK YEPAFAVVQIGSHQFKVSNGDSIFTERLKFC+VNDKL +
Sbjct: 120 AIGYKVLGPLDQSEGVFKPYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNK 179
>gi|307136145|gb|ADN33989.1| 50S ribosomal protein l21 mitochondrial precursor [Cucumis melo
subsp. melo]
Length = 279
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/184 (52%), Positives = 121/184 (65%), Gaps = 15/184 (8%)
Query: 1 MAHRRCLHVLSRHAAALLS-------LKTPPTLPFSTSISLKGLTPFQHRSLISSTLGP- 52
MA+RRCL VL+RHA+A+LS LK P+L F + L+ + +S+ P
Sbjct: 10 MANRRCLQVLTRHASAILSTKPYIHTLKIAPSLLFENFHTHASLS-----NCLSAKTDPS 64
Query: 53 --TNWSHYRHFSSNKNDDEGEDVDEDEDEDEETADESYEGEEIGDTVPDLGREYTLEEKE 110
T WSH R+ SS+ + +D EDEDEDE+ E + I + + +EYT EE E
Sbjct: 65 LCTYWSHTRYLSSDSRNGNEDDFTEDEDEDEDDEAYDSEDDGISTSSRVMKKEYTKEEME 124
Query: 111 AEAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKL 170
AEAA IGYKVLGPL +S+ +FK YEPAFAVVQIGSHQFKVSNGDSIFTERLKFC+VNDKL
Sbjct: 125 AEAAAIGYKVLGPLDQSEGIFKPYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKL 184
Query: 171 SFER 174
+
Sbjct: 185 ILNK 188
>gi|297798872|ref|XP_002867320.1| hypothetical protein ARALYDRAFT_328625 [Arabidopsis lyrata subsp.
lyrata]
gi|297313156|gb|EFH43579.1| hypothetical protein ARALYDRAFT_328625 [Arabidopsis lyrata subsp.
lyrata]
Length = 770
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/182 (43%), Positives = 111/182 (60%), Gaps = 11/182 (6%)
Query: 1 MAHRRCLHVLSRHAAALLSLKTPPTLPFSTSISLKGLTPFQHRSLISSTLGPTNWSHY-- 58
MA RC LSR A + S+ ++ I L G T H ++I + N + Y
Sbjct: 499 MASLRCFRELSRRATTVYSIIQTRSISSFPGIELSG-TSISHGTVIPNRSLSRNLTWYSL 557
Query: 59 ------RHFSSNKNDDEGEDVDEDEDEDEETADESYEGEEIGDTVPDLGREYTLEEKEAE 112
R FSSN ND ++ + +++++ +E + E+ + ++ REY+ EK E
Sbjct: 558 WYRSQDRRFSSNTNDTAEDEESSEGEDEDDDDEEGEDFEDSAEM--EVEREYSPAEKVEE 615
Query: 113 AAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLSF 172
AAEIGYKV+GPL+ S+R+FK YEP FA+VQIGSHQFKVSNGDSIFTE+LKFC++NDKL
Sbjct: 616 AAEIGYKVMGPLKPSERLFKPYEPVFAIVQIGSHQFKVSNGDSIFTEKLKFCDINDKLEL 675
Query: 173 ER 174
+
Sbjct: 676 TK 677
>gi|18417696|ref|NP_567861.1| 50S ribosomal protein L21 [Arabidopsis thaliana]
gi|29839556|sp|Q8L9A0.1|RM21_ARATH RecName: Full=50S ribosomal protein L21, mitochondrial; Flags:
Precursor
gi|12641613|emb|CAC27453.1| putative ribosomal protein L21 [Arabidopsis thaliana]
gi|21595368|gb|AAM66095.1| unknown [Arabidopsis thaliana]
gi|29028852|gb|AAO64805.1| At4g30930 [Arabidopsis thaliana]
gi|110736393|dbj|BAF00165.1| hypothetical protein [Arabidopsis thaliana]
gi|225898835|dbj|BAH30548.1| hypothetical protein [Arabidopsis thaliana]
gi|332660431|gb|AEE85831.1| 50S ribosomal protein L21 [Arabidopsis thaliana]
Length = 270
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/183 (45%), Positives = 113/183 (61%), Gaps = 15/183 (8%)
Query: 1 MAHRRCLHVLSRHAAALLSLKTPPTLP------FS-TSISLKGLTPFQHRSLISSTLGPT 53
MA RC LSR A + S+ ++ FS TSIS + P +RSL + +
Sbjct: 1 MASLRCFRELSRRATTVFSINQTRSISSFHGIEFSGTSISHGTVIP--NRSLTRNLPWYS 58
Query: 54 NW--SHYRHFSSNKNDDEGEDVDEDEDEDEETADESYEGEEIGDTVPDLGREYTLEEKEA 111
+W S R FSSN D + ++ + ++D+E E +E D ++ REY+ EK
Sbjct: 59 HWYRSQDRCFSSNTKDTDEDEESSEGEDDDEEEGEDFEDS--ADM--EVEREYSPAEKVE 114
Query: 112 EAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLS 171
EA EIGYKV+GPL+ S+R+FK YEP FA+VQIGSHQFKVSNGDSIFTE+LKFC++NDKL
Sbjct: 115 EAEEIGYKVMGPLKPSERLFKPYEPVFAIVQIGSHQFKVSNGDSIFTEKLKFCDINDKLE 174
Query: 172 FER 174
+
Sbjct: 175 LTK 177
>gi|357511751|ref|XP_003626164.1| 50S ribosomal protein L21 [Medicago truncatula]
gi|355501179|gb|AES82382.1| 50S ribosomal protein L21 [Medicago truncatula]
Length = 290
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 110/194 (56%), Gaps = 25/194 (12%)
Query: 4 RRCLHVLSRHAAALLSLKTPPTLPFSTSISLKG-------LTPFQHRSLISSTLGPTNWS 56
RRCL L+R + LSL P S + L P S +S G W
Sbjct: 6 RRCLQALTRQSQPTLSLFKDPLSLRLLSSAALLNHNISSPLLPIFTNSKPTSAFG--QWH 63
Query: 57 HYRHFSSNKNDDEGEDVDEDE--------------DEDEETADESYEGEEIGDTVPDLGR 102
H R+FSS+K DD ++ E D+D+ +E +E DTV R
Sbjct: 64 HGRYFSSSKQDDHIKEGGTHEIEDEDDDSDGDDDDDDDDYDEEEGDYEDEDDDTVAVSSR 123
Query: 103 E--YTLEEKEAEAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTER 160
+ YT EEKEAEA IGYKV+GPL+K+D VFK YEPAFAVVQIGSHQFKVSNGDSIFTER
Sbjct: 124 KKVYTEEEKEAEAEAIGYKVVGPLQKNDNVFKPYEPAFAVVQIGSHQFKVSNGDSIFTER 183
Query: 161 LKFCEVNDKLSFER 174
LKFCEVNDKL +
Sbjct: 184 LKFCEVNDKLILNK 197
>gi|357511749|ref|XP_003626163.1| 50S ribosomal protein L21 [Medicago truncatula]
gi|355501178|gb|AES82381.1| 50S ribosomal protein L21 [Medicago truncatula]
Length = 300
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 110/194 (56%), Gaps = 25/194 (12%)
Query: 4 RRCLHVLSRHAAALLSLKTPPTLPFSTSISLKG-------LTPFQHRSLISSTLGPTNWS 56
RRCL L+R + LSL P S + L P S +S G W
Sbjct: 16 RRCLQALTRQSQPTLSLFKDPLSLRLLSSAALLNHNISSPLLPIFTNSKPTSAFG--QWH 73
Query: 57 HYRHFSSNKNDDEGEDVDEDE--------------DEDEETADESYEGEEIGDTVPDLGR 102
H R+FSS+K DD ++ E D+D+ +E +E DTV R
Sbjct: 74 HGRYFSSSKQDDHIKEGGTHEIEDEDDDSDGDDDDDDDDYDEEEGDYEDEDDDTVAVSSR 133
Query: 103 E--YTLEEKEAEAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTER 160
+ YT EEKEAEA IGYKV+GPL+K+D VFK YEPAFAVVQIGSHQFKVSNGDSIFTER
Sbjct: 134 KKVYTEEEKEAEAEAIGYKVVGPLQKNDNVFKPYEPAFAVVQIGSHQFKVSNGDSIFTER 193
Query: 161 LKFCEVNDKLSFER 174
LKFCEVNDKL +
Sbjct: 194 LKFCEVNDKLILNK 207
>gi|388506582|gb|AFK41357.1| unknown [Medicago truncatula]
Length = 300
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 110/194 (56%), Gaps = 25/194 (12%)
Query: 4 RRCLHVLSRHAAALLSLKTPPTLPFSTSISLKG-------LTPFQHRSLISSTLGPTNWS 56
RRCL L+R + LSL P S + L P S +S G W
Sbjct: 16 RRCLQALTRQSQPTLSLFKDPLSLRLLSSAALLNHNISSPLLPIFTNSKPTSAFG--QWH 73
Query: 57 HYRHFSSNKNDDEGEDVDEDE--------------DEDEETADESYEGEEIGDTVPDLGR 102
H R+FSS+K DD ++ E D+D+ +E +E DTV R
Sbjct: 74 HGRYFSSSKQDDHIKEGGTHEIGDEDDDSDGDDDDDDDDYDEEEGDYEDEDDDTVAVSSR 133
Query: 103 E--YTLEEKEAEAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTER 160
+ YT EEKEAEA IGYKV+GPL+K+D VFK YEPAFAVVQIGSHQFKVSNGDSIFTER
Sbjct: 134 KKVYTEEEKEAEAEAIGYKVVGPLQKNDNVFKPYEPAFAVVQIGSHQFKVSNGDSIFTER 193
Query: 161 LKFCEVNDKLSFER 174
LKFCEVNDKL +
Sbjct: 194 LKFCEVNDKLILNK 207
>gi|359496166|ref|XP_003635167.1| PREDICTED: uncharacterized protein LOC100852480 [Vitis vinifera]
Length = 245
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/122 (61%), Positives = 91/122 (74%), Gaps = 5/122 (4%)
Query: 52 PTNWSHYRHFSSNKNDDEGEDVDEDEDEDEETA-DESYEGEEIGDTVPDLGREYTLEEKE 110
PT H RHFSS+ DDE ED DEDE+ED++ ES + E++ + R Y+ E+KE
Sbjct: 63 PTWPPHPRHFSSHSGDDEDEDEDEDEEEDDDEEMGESSDSEKVSAS----NRVYSAEDKE 118
Query: 111 AEAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKL 170
E+A IGYKV+GPL+ SDRVFK YEP FAVVQIGSHQFKVSNGD I+TERLKFCEVND++
Sbjct: 119 RESAAIGYKVVGPLQPSDRVFKPYEPVFAVVQIGSHQFKVSNGDCIYTERLKFCEVNDRV 178
Query: 171 SF 172
Sbjct: 179 GL 180
>gi|297735993|emb|CBI23967.3| unnamed protein product [Vitis vinifera]
Length = 89
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/75 (73%), Positives = 62/75 (82%)
Query: 102 REYTLEEKEAEAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERL 161
R Y+ E+KE E+A IGYKV+GPL+ SDRVFK YEP FAVVQIGSHQFKVSNGD I+TERL
Sbjct: 15 RVYSAEDKERESAAIGYKVVGPLQPSDRVFKPYEPVFAVVQIGSHQFKVSNGDCIYTERL 74
Query: 162 KFCEVNDKLSFERPC 176
KFCEVND+ E C
Sbjct: 75 KFCEVNDRYQTEVVC 89
>gi|224133964|ref|XP_002321703.1| predicted protein [Populus trichocarpa]
gi|222868699|gb|EEF05830.1| predicted protein [Populus trichocarpa]
Length = 381
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/183 (48%), Positives = 108/183 (59%), Gaps = 13/183 (7%)
Query: 1 MAHRRCLHVLSRHAAALLS------LKTPPTLPFSTSISLKGLT---PFQHRSLISSTLG 51
MA RR L ++RHA LLS LK P LP ISLK + P Q TL
Sbjct: 1 MAQRRWLQTVTRHALPLLSSKPTTSLKPLPHLP--APISLKSILSPKPLQQFLYTDPTLF 58
Query: 52 PTNWSHYRHFSSNKNDDEGEDVDEDEDEDEETADESYEGEEIGDTVPDLGREYTLEEKEA 111
++N+++ + +E+ED ++ +S E E TV D+ REY+ EE EA
Sbjct: 59 HARSFSSSSRDDSENEEDDVEEGGEEEEDYDS--DSNEAEVDDVTVSDMKREYSAEEIEA 116
Query: 112 EAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLS 171
EAA IGYKV+GPL SDRV K EP FAVVQIGSHQFKVSNGD I+ ERLKFCEVNDKL
Sbjct: 117 EAAAIGYKVIGPLLPSDRVLKHREPVFAVVQIGSHQFKVSNGDCIYVERLKFCEVNDKLI 176
Query: 172 FER 174
+
Sbjct: 177 LNK 179
>gi|2980773|emb|CAA18200.1| putative protein [Arabidopsis thaliana]
gi|7269995|emb|CAB79811.1| putative protein [Arabidopsis thaliana]
Length = 782
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/76 (68%), Positives = 64/76 (84%)
Query: 99 DLGREYTLEEKEAEAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFT 158
++ REY+ EK EA EIGYKV+GPL+ S+R+FK YEP FA+VQIGSHQFKVSNGDSIFT
Sbjct: 614 EVEREYSPAEKVEEAEEIGYKVMGPLKPSERLFKPYEPVFAIVQIGSHQFKVSNGDSIFT 673
Query: 159 ERLKFCEVNDKLSFER 174
E+LKFC++NDKL +
Sbjct: 674 EKLKFCDINDKLELTK 689
>gi|356548719|ref|XP_003542747.1| PREDICTED: 50S ribosomal protein L21, mitochondrial-like [Glycine
max]
Length = 267
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/183 (48%), Positives = 114/183 (62%), Gaps = 18/183 (9%)
Query: 1 MAHRRCLHVLSRHAAALLSLKTPPTLPFSTSISLKGLT--PFQHRSLISSTLGP-----T 53
MA RRCL L++ KT P L F + SL+ LT PF + + S
Sbjct: 1 MASRRCLRALTQ--------KTTPFL-FRNASSLRSLTVPPFPNANASSPVFTVRASVFA 51
Query: 54 NWSHYRHFSSNKNDDEGEDVDEDEDEDEETADESYEGEEIGDTVPDLGRE-YTLEEKEAE 112
W H R+FSS K DD ++ D+ +++ ++ ++ + ++ D G++ YT EEKEAE
Sbjct: 52 QWPHLRYFSSEKKDDHSDEDDDGDEDYDDEEEDYVDDDDDDDVPVSRGKKVYTAEEKEAE 111
Query: 113 AAEIGYKVLGPLRK-SDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLS 171
AA IGY+V+GPL+K D VFK YEP FAVVQIGSHQFKVSN DSIFTERLKFCEVNDKL
Sbjct: 112 AAAIGYRVVGPLQKDEDSVFKPYEPVFAVVQIGSHQFKVSNRDSIFTERLKFCEVNDKLI 171
Query: 172 FER 174
+
Sbjct: 172 LNK 174
>gi|356521362|ref|XP_003529325.1| PREDICTED: 50S ribosomal protein L21, mitochondrial-like isoform 1
[Glycine max]
Length = 262
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/181 (48%), Positives = 109/181 (60%), Gaps = 19/181 (10%)
Query: 1 MAHRRCLHVLSRHAAALL----SLKTPPTLPFSTSISLKGLTP--FQHRSLISSTLGPTN 54
MA RRCL L++ L SL++ LPF S +P F R+ + +
Sbjct: 1 MASRRCLRALTQTRPFLFRKASSLRSLAVLPFPNS----NASPHAFTARASVFA-----Q 51
Query: 55 WSHYRHFSSNKNDDEGEDVDEDEDEDEETADESYEGEEIGDTVPDLGREYTLEEKEAEAA 114
H R FSS D + + DE++D DE+ +E ++ TV + YT EEKEAEAA
Sbjct: 52 CPHLRCFSS---DKKDDHSDEEDDSDEDYDEEEDYVDDDDVTVSRGKKVYTAEEKEAEAA 108
Query: 115 EIGYKVLGPLRKS-DRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLSFE 173
IGY+V+GPL+K D VFK YEP FAVVQIGSHQFKVSN DSIFTERLKFCEVNDKL
Sbjct: 109 AIGYRVVGPLQKEEDSVFKPYEPVFAVVQIGSHQFKVSNRDSIFTERLKFCEVNDKLILN 168
Query: 174 R 174
+
Sbjct: 169 K 169
>gi|212723982|ref|NP_001132778.1| uncharacterized protein LOC100194267 [Zea mays]
gi|195635625|gb|ACG37281.1| 50S ribosomal protein L21 [Zea mays]
Length = 250
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 108/177 (61%), Gaps = 7/177 (3%)
Query: 1 MAHRRCLHVLSRHAAALLSLKTPPTLPFSTSI-SLKGLTPFQHRSLISSTLGPTNWSHYR 59
MA RRCL L + L+ ++ P P ST+ +L L+ + P + R
Sbjct: 1 MASRRCL--LRFLSIRLVPQRSQPLAPISTATRTLTSLSEALGSPAPRALASPRLYYPSR 58
Query: 60 -HFSSNKNDDEGEDVDEDEDEDEETADESY-EGEEIGDTVPDLGREYTLEEKEAEAAEIG 117
HF++ + DE + DE+E D+E +D + + EE+ G+ T EEK AEAAEIG
Sbjct: 59 CHFATRSSGDEDDGEDEEEHYDDEGSDGEWGDDEEVVAAKKPSGK--TEEEKVAEAAEIG 116
Query: 118 YKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLSFER 174
YKVLGPL D+ FK YEP FAVVQIGSHQFKVSNGDSIFTERLKFC+VNDKL R
Sbjct: 117 YKVLGPLEADDKPFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLVLNR 173
>gi|356521364|ref|XP_003529326.1| PREDICTED: 50S ribosomal protein L21, mitochondrial-like isoform 2
[Glycine max]
Length = 228
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/176 (49%), Positives = 107/176 (60%), Gaps = 19/176 (10%)
Query: 1 MAHRRCLHVLSRHAAALL----SLKTPPTLPFSTSISLKGLTP--FQHRSLISSTLGPTN 54
MA RRCL L++ L SL++ LPF S +P F R+ + +
Sbjct: 1 MASRRCLRALTQTRPFLFRKASSLRSLAVLPFPNS----NASPHAFTARASVFA-----Q 51
Query: 55 WSHYRHFSSNKNDDEGEDVDEDEDEDEETADESYEGEEIGDTVPDLGREYTLEEKEAEAA 114
H R FSS D + + DE++D DE+ +E ++ TV + YT EEKEAEAA
Sbjct: 52 CPHLRCFSS---DKKDDHSDEEDDSDEDYDEEEDYVDDDDVTVSRGKKVYTAEEKEAEAA 108
Query: 115 EIGYKVLGPLRKS-DRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDK 169
IGY+V+GPL+K D VFK YEP FAVVQIGSHQFKVSN DSIFTERLKFCEVNDK
Sbjct: 109 AIGYRVVGPLQKEEDSVFKPYEPVFAVVQIGSHQFKVSNRDSIFTERLKFCEVNDK 164
>gi|194695374|gb|ACF81771.1| unknown [Zea mays]
gi|413946465|gb|AFW79114.1| 50S ribosomal protein L21 [Zea mays]
Length = 250
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 108/177 (61%), Gaps = 7/177 (3%)
Query: 1 MAHRRCLHVLSRHAAALLSLKTPPTLPFSTSI-SLKGLTPFQHRSLISSTLGPTNWSHYR 59
MA RRCL L + L+ ++ P P ST+ +L L+ + P + R
Sbjct: 1 MASRRCL--LRFLSIRLVPQRSQPLAPISTATRTLTSLSEALGSPAPRALASPRLYYPSR 58
Query: 60 -HFSSNKNDDEGEDVDEDEDEDEETADESY-EGEEIGDTVPDLGREYTLEEKEAEAAEIG 117
HF++ + DE + DE+E D+E +D + + EE+ G+ T EEK AEAAEIG
Sbjct: 59 CHFATRSSGDEDDGEDEEEHYDDEGSDGEWGDDEEVVAAKKPSGK--TEEEKVAEAAEIG 116
Query: 118 YKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLSFER 174
YKVLGPL D+ FK YEP FAVVQIGSHQFKVSNGDSIFTERLKFC+VNDKL R
Sbjct: 117 YKVLGPLGADDKPFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLVLNR 173
>gi|242091337|ref|XP_002441501.1| hypothetical protein SORBIDRAFT_09g028120 [Sorghum bicolor]
gi|241946786|gb|EES19931.1| hypothetical protein SORBIDRAFT_09g028120 [Sorghum bicolor]
Length = 250
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 50/59 (84%)
Query: 116 IGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLSFER 174
IGYKVLGPL ++ FK YEP FAVVQIGSHQFKVSNGDSIFTERLKFC+VNDKL R
Sbjct: 115 IGYKVLGPLGADEKPFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLVLNR 173
>gi|357132610|ref|XP_003567922.1| PREDICTED: 50S ribosomal protein L21, mitochondrial-like isoform 1
[Brachypodium distachyon]
gi|357132612|ref|XP_003567923.1| PREDICTED: 50S ribosomal protein L21, mitochondrial-like isoform 2
[Brachypodium distachyon]
Length = 262
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/117 (61%), Positives = 84/117 (71%), Gaps = 3/117 (2%)
Query: 59 RHFSSNKNDDEGEDVDEDEDEDEETADESYEG-EEIGDTVPDLGREYTLEEKEAEAAEIG 117
R+F++ + DEG++ DE+ EDE + DE EG EE P G+ T EEK AEA EIG
Sbjct: 61 RYFATRSSGDEGDEDDEEHYEDEGSGDEWGEGDEETPAAKPPSGK--TEEEKLAEAEEIG 118
Query: 118 YKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLSFER 174
YKV GPL ++ FK YEP FAVVQIGSHQFKVSNGDSIFTERLKFC+VNDKL R
Sbjct: 119 YKVTGPLGSDEKPFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNR 175
>gi|115465385|ref|NP_001056292.1| Os05g0557800 [Oryza sativa Japonica Group]
gi|49328019|gb|AAT58720.1| putative ribosomal protein L21 [Oryza sativa Japonica Group]
gi|50878314|gb|AAT85089.1| putative 50S ribosomal protein L21 [Oryza sativa Japonica Group]
gi|113579843|dbj|BAF18206.1| Os05g0557800 [Oryza sativa Japonica Group]
gi|125553275|gb|EAY98984.1| hypothetical protein OsI_20941 [Oryza sativa Indica Group]
gi|215687150|dbj|BAG90920.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632523|gb|EEE64655.1| hypothetical protein OsJ_19509 [Oryza sativa Japonica Group]
Length = 250
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/59 (76%), Positives = 49/59 (83%)
Query: 116 IGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLSFER 174
IGY V+GPL ++ FK YEP FAVVQIGSHQFKVSNGDSIFTERLKFC+VNDKL R
Sbjct: 115 IGYTVVGPLGADEKPFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNR 173
>gi|226497698|ref|NP_001140704.1| uncharacterized protein LOC100272779 [Zea mays]
gi|194700660|gb|ACF84414.1| unknown [Zea mays]
gi|413948415|gb|AFW81064.1| hypothetical protein ZEAMMB73_427624 [Zea mays]
Length = 251
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/59 (76%), Positives = 49/59 (83%)
Query: 116 IGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLSFER 174
IGYKVL PL ++ FK YEP FA+VQIGSHQFKVSNGDSIFTERLKFC+VNDKL R
Sbjct: 116 IGYKVLAPLGADEKPFKPYEPVFAIVQIGSHQFKVSNGDSIFTERLKFCDVNDKLFLNR 174
>gi|296089877|emb|CBI39696.3| unnamed protein product [Vitis vinifera]
Length = 89
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 54/68 (79%)
Query: 104 YTLEEKEAEAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKF 163
Y+ E+KE EA IG KV+GPL SDRVFK YE FA VQIG+H+FKVSNGD I+TERLK
Sbjct: 20 YSAEDKELEADAIGCKVVGPLHSSDRVFKPYELVFAAVQIGAHRFKVSNGDCIYTERLKL 79
Query: 164 CEVNDKLS 171
CEV+DK+
Sbjct: 80 CEVSDKVC 87
>gi|229576588|gb|ACQ82684.1| At4g30930-like protein [Solanum quitoense]
gi|229576590|gb|ACQ82685.1| At4g30930-like protein [Solanum quitoense]
gi|229576592|gb|ACQ82686.1| At4g30930-like protein [Solanum hirtum]
gi|229576594|gb|ACQ82687.1| At4g30930-like protein [Solanum hirtum]
Length = 105
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 62/87 (71%), Gaps = 4/87 (4%)
Query: 56 SHYRHFSSNKNDDEGEDVDEDEDEDEETADESYEGEEIGDTVPDLGREYTLEEKEAEAAE 115
S +RHF SN+ ++ +D +EDE E E D++ EG E + GREYT EEKE EAAE
Sbjct: 23 SFHRHFCSNRPNN-SDDEEEDESEGETDYDDNVEGLESNS---EPGREYTPEEKEQEAAE 78
Query: 116 IGYKVLGPLRKSDRVFKKYEPAFAVVQ 142
IGYKV+G L+KSDRVFK YEP +AV+Q
Sbjct: 79 IGYKVIGSLQKSDRVFKPYEPVYAVIQ 105
>gi|116794414|gb|ABK27135.1| unknown [Picea sitchensis]
Length = 298
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Query: 76 DEDEDEETADESYEGEEIGDTVPDLGREYTLEEKEAEAAEIGYKVLGPLRKSDRVFKKYE 135
D +D E E E T R + EE + EA EIGY+V+G + SD + E
Sbjct: 123 DNQQDAVKGVERTERNEADATRRVYRRPLSPEEVQ-EADEIGYRVIGSAKNSDGKSWRQE 181
Query: 136 PAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLSFER 174
P FAVVQIGSHQFKVS GD I+ E+LK+ +V K+ +
Sbjct: 182 PIFAVVQIGSHQFKVSGGDWIYVEKLKYADVKQKIILNK 220
>gi|357450723|ref|XP_003595638.1| 50S ribosomal protein L21 [Medicago truncatula]
gi|355484686|gb|AES65889.1| 50S ribosomal protein L21 [Medicago truncatula]
Length = 407
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/37 (83%), Positives = 34/37 (91%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLSFER 174
FAVV+IGSHQFKVSNGD+IFTERLKFCEVNDKL +
Sbjct: 278 FAVVEIGSHQFKVSNGDNIFTERLKFCEVNDKLILNK 314
>gi|167997399|ref|XP_001751406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162697387|gb|EDQ83723.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 444
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 102 REYTLEEKEAEAAE-IGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTER 160
R + L ++ + AE IGYKV+ + + K AFAVVQ+GSHQFKVS D I+TE+
Sbjct: 229 RPFKLNNEQRKLAEVIGYKVVDRYTEDNFGKNKKPKAFAVVQVGSHQFKVSPNDLIYTEK 288
Query: 161 LKFCEVNDKLSFER 174
LK+C++NDKL +
Sbjct: 289 LKYCDINDKLMLNK 302
>gi|302772282|ref|XP_002969559.1| hypothetical protein SELMODRAFT_410329 [Selaginella moellendorffii]
gi|302774821|ref|XP_002970827.1| hypothetical protein SELMODRAFT_411445 [Selaginella moellendorffii]
gi|300161538|gb|EFJ28153.1| hypothetical protein SELMODRAFT_411445 [Selaginella moellendorffii]
gi|300163035|gb|EFJ29647.1| hypothetical protein SELMODRAFT_410329 [Selaginella moellendorffii]
Length = 230
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 37/59 (62%)
Query: 116 IGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLSFER 174
+GY V+G L + + AFAV QIG+ QFKV+ GD ++ ERLK VNDKLS +
Sbjct: 81 LGYTVVGRLVVDKPLAIPRQDAFAVFQIGAKQFKVTPGDVLYIERLKCANVNDKLSLHK 139
>gi|384252046|gb|EIE25523.1| hypothetical protein COCSUDRAFT_40742 [Coccomyxa subellipsoidea
C-169]
Length = 185
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 29/40 (72%)
Query: 135 EPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLSFER 174
+P FAVV++G QFKVS GD + +E+++ +VNDK+ R
Sbjct: 57 KPVFAVVELGPTQFKVSPGDVVVSEKIRGVDVNDKVKLSR 96
>gi|225454186|ref|XP_002272295.1| PREDICTED: 50S ribosomal protein L21, chloroplastic [Vitis
vinifera]
gi|297745266|emb|CBI40346.3| unnamed protein product [Vitis vinifera]
Length = 209
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%)
Query: 110 EAEAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDK 169
E E++E + L + + K E FAVV IGS Q+ V G I+T+RLK +VNDK
Sbjct: 68 EVESSEPNSEALQVVEEPPPELPKREEIFAVVMIGSRQYIVFPGRYIYTQRLKGADVNDK 127
Query: 170 LSFER 174
+ R
Sbjct: 128 IILNR 132
>gi|307103197|gb|EFN51459.1| hypothetical protein CHLNCDRAFT_140197 [Chlorella variabilis]
Length = 147
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
Query: 124 LRKSDRVFKKYE-PA---FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLSFER 174
+R +RV ++Y PA FAVV++G Q+KV+ D I E+L +VNDKL +R
Sbjct: 15 VRLDERVQQQYSVPARSVFAVVEVGGTQYKVAPNDVIVVEKLADVDVNDKLQLQR 69
>gi|308799429|ref|XP_003074495.1| putative 50S ribosomal protein L21 (ISS) [Ostreococcus tauri]
gi|116000666|emb|CAL50346.1| putative 50S ribosomal protein L21 (ISS) [Ostreococcus tauri]
Length = 214
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLSFER 174
F VVQI SHQFKVS D I+ +++K EVND ++ R
Sbjct: 108 FGVVQIRSHQFKVSPDDLIYVDKVKDVEVNDVVTLPR 144
>gi|423224483|ref|ZP_17210951.1| SusC/RagA family TonB-linked outer membrane protein [Bacteroides
cellulosilyticus CL02T12C19]
gi|392635710|gb|EIY29607.1| SusC/RagA family TonB-linked outer membrane protein [Bacteroides
cellulosilyticus CL02T12C19]
Length = 1125
Score = 43.1 bits (100), Expect = 0.047, Method: Composition-based stats.
Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 33/164 (20%)
Query: 17 LLSLKTPPTLPFSTSISLKGL---TPFQHRSLISS--TLGPTNWSHYRHFSSNKNDDEGE 71
LLS+ P ++TS+ G T F+ R + +GP +W+ + S+NKN +
Sbjct: 819 LLSVPVPQQSGYTTSLQNIGKVRNTGFEIRFSTAKDIEMGPVSWNSSLNLSTNKN----K 874
Query: 72 DVDEDEDEDEETADESYEGEEIGDTVPDLGREYTLEEKEAEAAEIGYKVLGPLRKSDRVF 131
+ + + + + E+G ++ +L GY+++G + KSD F
Sbjct: 875 VLALAPGQTQIIGSKGFSITEVGKSISEL---------------YGYEIIG-IYKSDEDF 918
Query: 132 KKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLSFERP 175
KKY PA QIG + K N D++ + DK SF P
Sbjct: 919 KKY-PAMPGTQIGDYIIKNQNDDNVINTK-------DKKSFGSP 954
>gi|226495409|ref|NP_001151711.1| LOC100285347 [Zea mays]
gi|194701604|gb|ACF84886.1| unknown [Zea mays]
gi|413936468|gb|AFW71019.1| 50S ribosomal protein L21 [Zea mays]
Length = 231
Score = 42.7 bits (99), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLSFER 174
FAVV IGS Q+ V G I+T+RLK VND++ +
Sbjct: 112 FAVVMIGSRQYIVMPGRYIYTQRLKGANVNDQIILNK 148
>gi|413925928|gb|AFW65860.1| hypothetical protein ZEAMMB73_969110 [Zea mays]
Length = 227
Score = 42.4 bits (98), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLSFER 174
FAVV IGS Q+ V G I+T+RLK VND++ +
Sbjct: 110 FAVVMIGSRQYIVMPGRYIYTQRLKGANVNDQIILNK 146
>gi|223949103|gb|ACN28635.1| unknown [Zea mays]
Length = 214
Score = 42.4 bits (98), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLSFER 174
FAVV IGS Q+ V G I+T+RLK VND++ +
Sbjct: 97 FAVVMIGSRQYIVMPGRYIYTQRLKGANVNDQIILNK 133
>gi|145340978|ref|XP_001415593.1| Plastid ribosomal protein L21 large ribosomal subunit [Ostreococcus
lucimarinus CCE9901]
gi|144575816|gb|ABO93885.1| Plastid ribosomal protein L21 large ribosomal subunit [Ostreococcus
lucimarinus CCE9901]
Length = 207
Score = 42.4 bits (98), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 25/41 (60%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLSFERPCWF 178
F VV++ SHQFKVS D IF +++K EVND + R
Sbjct: 102 FGVVEVRSHQFKVSPDDLIFVDKIKDVEVNDVVRLPRVLML 142
>gi|195649211|gb|ACG44073.1| 50S ribosomal protein L21 [Zea mays]
Length = 207
Score = 42.4 bits (98), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLSFER 174
FAVV IGS Q+ V G I+T+RLK VND++ +
Sbjct: 88 FAVVMIGSRQYIVMPGRYIYTQRLKGANVNDQIILNK 124
>gi|357139216|ref|XP_003571180.1| PREDICTED: 50S ribosomal protein L21, chloroplastic-like
[Brachypodium distachyon]
Length = 284
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLSFER 174
FAVV IGS Q+ V G I+T+RLK VND++ +
Sbjct: 168 FAVVMIGSRQYIVMPGRYIYTQRLKDANVNDQIILNK 204
>gi|413925929|gb|AFW65861.1| 50S ribosomal protein L21 [Zea mays]
Length = 142
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKL 170
FAVV IGS Q+ V G I+T+RLK VND++
Sbjct: 110 FAVVMIGSRQYIVMPGRYIYTQRLKGANVNDQV 142
>gi|115445399|ref|NP_001046479.1| Os02g0259600 [Oryza sativa Japonica Group]
gi|47497887|dbj|BAD20071.1| putative 50S ribosomal protein L21, chloroplast [Oryza sativa
Japonica Group]
gi|47497911|dbj|BAD20117.1| putative 50S ribosomal protein L21, chloroplast [Oryza sativa
Japonica Group]
gi|113536010|dbj|BAF08393.1| Os02g0259600 [Oryza sativa Japonica Group]
gi|125581545|gb|EAZ22476.1| hypothetical protein OsJ_06142 [Oryza sativa Japonica Group]
gi|215694047|dbj|BAG89246.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737504|dbj|BAG96634.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 214
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLSFER 174
FAVV IGS Q+ V G I+T+RLK VND++ +
Sbjct: 97 FAVVMIGSRQYIVMPGRYIYTQRLKGANVNDQIILNK 133
>gi|125538873|gb|EAY85268.1| hypothetical protein OsI_06639 [Oryza sativa Indica Group]
Length = 214
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLSFER 174
FAVV IGS Q+ V G I+T+RLK VND++ +
Sbjct: 97 FAVVMIGSRQYIVMPGRYIYTQRLKGANVNDQIILNK 133
>gi|290997610|ref|XP_002681374.1| predicted protein [Naegleria gruberi]
gi|284094998|gb|EFC48630.1| predicted protein [Naegleria gruberi]
Length = 127
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 135 EPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLSFERPCWF 178
E FAVVQIG HQ+KV+NGD I R+ EV +++ +
Sbjct: 6 ELKFAVVQIGGHQYKVTNGDRITVNRIP-VEVGTQINLNKILLL 48
>gi|302849447|ref|XP_002956253.1| mitochondrial ribosomal protein L21 [Volvox carteri f. nagariensis]
gi|300258365|gb|EFJ42602.1| mitochondrial ribosomal protein L21 [Volvox carteri f. nagariensis]
Length = 403
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 133 KYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLSFER 174
K E F +VQ+ QFKV+ D IF +L EVND L+ +R
Sbjct: 173 KPERTFGIVQLAGSQFKVTTDDIIFVNQLTDVEVNDVLALDR 214
>gi|449463382|ref|XP_004149413.1| PREDICTED: 50S ribosomal protein L21, chloroplastic-like [Cucumis
sativus]
gi|449496845|ref|XP_004160241.1| PREDICTED: 50S ribosomal protein L21, chloroplastic-like [Cucumis
sativus]
Length = 206
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 135 EPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLSFER 174
E FAVV IGS Q+ V G I T+RLK +VNDK++ +
Sbjct: 90 EEIFAVVMIGSRQYIVFPGRYIHTQRLKGADVNDKITLNK 129
>gi|132776|sp|P24613.1|RK21_SPIOL RecName: Full=50S ribosomal protein L21, chloroplastic; AltName:
Full=CL21; AltName: Full=CS-L7; Flags: Precursor
gi|21315|emb|CAA40019.1| L21 r-protein [Spinacia oleracea]
gi|170135|gb|AAA34041.1| ribosomal protein L21 [Spinacia oleracea]
gi|310590|gb|AAA74715.1| ribosomal protein L21 [Spinacia oleracea]
Length = 256
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLSFER 174
FAVV IGS Q+ V G I+T+RLK VNDK+ +
Sbjct: 124 FAVVVIGSRQYIVIPGRWIYTQRLKGATVNDKIVLNK 160
>gi|189096142|pdb|3BBO|T Chain T, Homology Model For The Spinach Chloroplast 50s Subunit
Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome
Length = 257
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 138 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLSFER 174
FAVV IGS Q+ V G I+T+RLK VNDK+ +
Sbjct: 125 FAVVVIGSRQYIVIPGRWIYTQRLKGATVNDKIVLNK 161
>gi|374851900|dbj|BAL54847.1| 50S ribosomal protein L21 [uncultured candidate division OP1
bacterium]
gi|374855093|dbj|BAL57959.1| 50S ribosomal protein L21 [uncultured candidate division OP1
bacterium]
gi|374855718|dbj|BAL58573.1| 50S ribosomal protein L21 [uncultured candidate division OP1
bacterium]
Length = 105
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 26/37 (70%)
Query: 137 AFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLSFE 173
+AV++ GS Q++VS GD+I E+LK EV ++ F+
Sbjct: 3 VYAVIETGSKQYRVSPGDAIVIEKLKGVEVGQQIEFK 39
>gi|224135915|ref|XP_002327335.1| predicted protein [Populus trichocarpa]
gi|222835705|gb|EEE74140.1| predicted protein [Populus trichocarpa]
Length = 227
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 133 KYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLSFER 174
K E FAVV +GS Q+ V G ++ +RLK VNDK++ +
Sbjct: 109 KREEIFAVVMVGSRQYIVIPGRWLYVQRLKGANVNDKVNLNK 150
>gi|412993910|emb|CCO14421.1| 50S ribosomal protein L21 [Bathycoccus prasinos]
Length = 231
Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 22/38 (57%)
Query: 137 AFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLSFER 174
FAVV IGSHQ KVS D F E+L VND + R
Sbjct: 125 VFAVVSIGSHQHKVSPDDLFFVEKLHGAHVNDVVELPR 162
>gi|255571748|ref|XP_002526817.1| 50S ribosomal protein L21, putative [Ricinus communis]
gi|223533821|gb|EEF35552.1| 50S ribosomal protein L21, putative [Ricinus communis]
Length = 214
Score = 39.7 bits (91), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 133 KYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLSFER 174
K E FAVV +G Q+ V G I+ +RLK VNDK++ +
Sbjct: 96 KREEIFAVVMVGGRQYIVIPGRFIYVQRLKGANVNDKVALNK 137
>gi|307136383|gb|ADN34194.1| 50S ribosomal protein l21 [Cucumis melo subsp. melo]
Length = 135
Score = 38.9 bits (89), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 24/38 (63%)
Query: 135 EPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLSF 172
E FAVV IGS Q+ V G I T+RLK VNDK++
Sbjct: 92 EEIFAVVMIGSRQYIVFPGRYIHTQRLKGANVNDKVAL 129
>gi|373464437|ref|ZP_09555976.1| ribosomal protein L21 [Lactobacillus kisonensis F0435]
gi|371762639|gb|EHO51168.1| ribosomal protein L21 [Lactobacillus kisonensis F0435]
Length = 136
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 131 FKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLSFER 174
+K+ +AV+ G Q+KVS GD+I+ E+L E DK++F++
Sbjct: 29 YKEVHNMYAVITTGGKQYKVSEGDAIYVEKLDANE-GDKVTFDQ 71
>gi|401766238|ref|YP_006581244.1| 50S ribosomal protein L21 [Mycoplasma gallisepticum VA94_7994-1-7P]
gi|401766994|ref|YP_006581999.1| 50S ribosomal protein L21 [Mycoplasma gallisepticum
NC95_13295-2-2P]
gi|401767762|ref|YP_006582766.1| 50S ribosomal protein L21 [Mycoplasma gallisepticum NC96_1596-4-2P]
gi|401768523|ref|YP_006583526.1| 50S ribosomal protein L21 [Mycoplasma gallisepticum
NY01_2001.047-5-1P]
gi|401769275|ref|YP_006584277.1| 50S ribosomal protein L21 [Mycoplasma gallisepticum
WI01_2001.043-13-2P]
gi|401770025|ref|YP_006585026.1| 50S ribosomal protein L21 [Mycoplasma gallisepticum
NC06_2006.080-5-2P]
gi|401770781|ref|YP_006585781.1| 50S ribosomal protein L21 [Mycoplasma gallisepticum
CA06_2006.052-5-2P]
gi|401771531|ref|YP_006586530.1| 50S ribosomal protein L21 [Mycoplasma gallisepticum
NC08_2008.031-4-3P]
gi|400272486|gb|AFP75949.1| 50S ribosomal protein L21 [Mycoplasma gallisepticum VA94_7994-1-7P]
gi|400273254|gb|AFP76716.1| 50S ribosomal protein L21 [Mycoplasma gallisepticum
NC95_13295-2-2P]
gi|400274009|gb|AFP77470.1| 50S ribosomal protein L21 [Mycoplasma gallisepticum NC96_1596-4-2P]
gi|400274781|gb|AFP78241.1| 50S ribosomal protein L21 [Mycoplasma gallisepticum
NY01_2001.047-5-1P]
gi|400275542|gb|AFP79001.1| 50S ribosomal protein L21 [Mycoplasma gallisepticum
WI01_2001.043-13-2P]
gi|400276289|gb|AFP79747.1| 50S ribosomal protein L21 [Mycoplasma gallisepticum
NC06_2006.080-5-2P]
gi|400277034|gb|AFP80491.1| 50S ribosomal protein L21 [Mycoplasma gallisepticum
CA06_2006.052-5-2P]
gi|400277798|gb|AFP81254.1| 50S ribosomal protein L21 [Mycoplasma gallisepticum
NC08_2008.031-4-3P]
Length = 123
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 127 SDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLSFER 174
++ +++KY FAV+ GS Q++V D I+ E+L +V +K+ F++
Sbjct: 14 NESIWRKYNKMFAVIASGSKQYRVKLNDEIYVEKLN-SQVGEKIVFDK 60
>gi|297846634|ref|XP_002891198.1| 50S ribosomal protein L21, chloroplast [Arabidopsis lyrata subsp.
lyrata]
gi|297337040|gb|EFH67457.1| 50S ribosomal protein L21, chloroplast [Arabidopsis lyrata subsp.
lyrata]
Length = 215
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%)
Query: 105 TLEEKEAEAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFC 164
++ E E E +I V+ + + K E FAVV +G Q+ V G ++T+RLK
Sbjct: 68 SVVEAEPETTDIEAVVVSDVSEVTEEKAKREEIFAVVMVGGRQYIVFPGRYLYTQRLKDA 127
Query: 165 EVNDKLSFER 174
V+D++ +
Sbjct: 128 NVDDQIVLNK 137
>gi|15219695|ref|NP_174808.1| 50S ribosomal protein L21 [Arabidopsis thaliana]
gi|1710424|sp|P51412.1|RK21_ARATH RecName: Full=50S ribosomal protein L21, chloroplastic; AltName:
Full=CL21; Flags: Precursor
gi|8778379|gb|AAF79387.1|AC007887_46 F15O4.7 [Arabidopsis thaliana]
gi|16226899|gb|AAL16293.1|AF428363_1 At1g35680/F15O4_7 [Arabidopsis thaliana]
gi|1149573|emb|CAA89887.1| chloroplast ribosomal large subunit protein L21 [Arabidopsis
thaliana]
gi|14456036|emb|CAB59360.2| chloroplast ribosomal protein L21 [Arabidopsis thaliana]
gi|16648685|gb|AAL25535.1| At1g35680/F15O4_7 [Arabidopsis thaliana]
gi|21436001|gb|AAM51578.1| At1g35680/F15O4_7 [Arabidopsis thaliana]
gi|332193702|gb|AEE31823.1| 50S ribosomal protein L21 [Arabidopsis thaliana]
Length = 220
Score = 36.2 bits (82), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%)
Query: 105 TLEEKEAEAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFC 164
++ E E E +I V+ + + K E FAV+ +G Q+ V G ++T+RLK
Sbjct: 68 SVVEAEPETTDIEAVVVSDVSEVTEEKAKREEIFAVIMVGGRQYIVFPGRYLYTQRLKDA 127
Query: 165 EVNDKLSFER 174
V+D++ +
Sbjct: 128 NVDDQIVLNK 137
>gi|432881582|ref|XP_004073851.1| PREDICTED: synaptic vesicle glycoprotein 2A-like [Oryzias latipes]
Length = 737
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 51 GPTNWSHYRHFSSNKNDDEGEDVDEDEDEDEETADESYEGEEIGDTVPDLGR 102
G + +YR S+ +NDDEG D E DE+ DE YEGE G D G+
Sbjct: 61 GSQDGGYYRGDSTARNDDEGGHSDSTEGHDED--DEIYEGEYQGIPRADSGK 110
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.133 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,946,722,183
Number of Sequences: 23463169
Number of extensions: 126784018
Number of successful extensions: 1617619
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2897
Number of HSP's successfully gapped in prelim test: 2286
Number of HSP's that attempted gapping in prelim test: 1499853
Number of HSP's gapped (non-prelim): 77316
length of query: 178
length of database: 8,064,228,071
effective HSP length: 133
effective length of query: 45
effective length of database: 9,238,593,890
effective search space: 415736725050
effective search space used: 415736725050
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 71 (32.0 bits)