BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030405
(178 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 300 bits (767), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 147/172 (85%), Positives = 153/172 (88%)
Query: 1 MVQCLDGLKHFCVVVVNCCDADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSA 60
M QC+DG+KH C V+ C D DLYKQ GL DPE LAR+TVFSVSEIEALYELFKKISSA
Sbjct: 1 MSQCVDGIKHLCTSVLGCFDLDLYKQSGGLGDPELLARDTVFSVSEIEALYELFKKISSA 60
Query: 61 VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPI 120
VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGIL FEEFARALS+FHPN+PI
Sbjct: 61 VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPI 120
Query: 121 DDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVL 172
DDKI FSFQLYDLKQQGFIERQEVKQMVVATL ESGMNL D VIE IIDK
Sbjct: 121 DDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTF 172
Score = 30.4 bits (67), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 88 DRVFDLFDTKHNGILDFEEFARALSIFHPN 117
D+ F+ DTKH+G +D EE+ R+L + HP+
Sbjct: 169 DKTFEEADTKHDGKIDKEEW-RSLVLRHPS 197
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 260 bits (664), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 129/141 (91%), Positives = 132/141 (93%)
Query: 32 DPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVF 91
DPE LAR+TVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVF
Sbjct: 1 DPELLARDTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVF 60
Query: 92 DLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVAT 151
DLFDTKHNGIL FEEFARALS+FHPN+PIDDKI FSFQLYDLKQQGFIERQEVKQMVVAT
Sbjct: 61 DLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVAT 120
Query: 152 LTESGMNLSDDVIESIIDKVL 172
L ESGMNL D VIE IIDK
Sbjct: 121 LAESGMNLKDTVIEDIIDKTF 141
Score = 30.0 bits (66), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 88 DRVFDLFDTKHNGILDFEEFARALSIFHPN 117
D+ F+ DTKH+G +D EE+ R+L + HP+
Sbjct: 138 DKTFEEADTKHDGKIDKEEW-RSLVLRHPS 166
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 195 bits (496), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 88/147 (59%), Positives = 122/147 (82%)
Query: 26 QPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESL 85
+P G EDPE LA T F+V E+EALYELFKK+SS++IDDGLI+KEEFQLALF+ + +L
Sbjct: 15 RPPGYEDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFRNRNRRNL 74
Query: 86 FADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 145
FADR+FD+FD K NG+++F EF R+L +FHP++P+ +K++F+F+LYDL+Q GFIER+E+K
Sbjct: 75 FADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELK 134
Query: 146 QMVVATLTESGMNLSDDVIESIIDKVL 172
+MVVA L ES + LS+D+IE ++DK
Sbjct: 135 EMVVALLHESELVLSEDMIEVMVDKAF 161
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 195 bits (495), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 88/147 (59%), Positives = 122/147 (82%)
Query: 26 QPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESL 85
+P G EDPE LA T F+V E+EALYELFKK+SS++IDDGLI+KEEFQLALF+ + +L
Sbjct: 15 RPPGYEDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFRNRNRRNL 74
Query: 86 FADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 145
FADR+FD+FD K NG+++F EF R+L +FHP++P+ +K++F+F+LYDL+Q GFIER+E+K
Sbjct: 75 FADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELK 134
Query: 146 QMVVATLTESGMNLSDDVIESIIDKVL 172
+MVVA L ES + LS+D+IE ++DK
Sbjct: 135 EMVVALLHESELVLSEDMIEVMVDKAF 161
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 72/127 (56%), Gaps = 10/127 (7%)
Query: 26 QPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKE 83
+P GLE EA +T F+ E++ LY FK + G++N+E F+ A F +
Sbjct: 35 RPEGLEQLEA---QTNFTKRELQVLYRGFKNECPS----GVVNEETFKQIYAQFFPHGDA 87
Query: 84 SLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQE 143
S +A +F+ FDT G + FE+F ALSI + + +K+ ++F LYD+ + G+I ++E
Sbjct: 88 STYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGT-VHEKLRWTFNLYDINKDGYINKEE 146
Query: 144 VKQMVVA 150
+ +V A
Sbjct: 147 MMDIVKA 153
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 72/127 (56%), Gaps = 10/127 (7%)
Query: 26 QPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKE 83
+P GLE EA +T F+ E++ LY FK + G++N+E F+ A F +
Sbjct: 2 RPEGLEQLEA---QTNFTKRELQVLYRGFKNEXPS----GVVNEETFKQIYAQFFPHGDA 54
Query: 84 SLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQE 143
S +A +F+ FDT G + FE+F ALSI + + +K+ ++F LYD+ + G+I ++E
Sbjct: 55 STYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGT-VHEKLRWTFNLYDINKDGYINKEE 113
Query: 144 VKQMVVA 150
+ +V A
Sbjct: 114 MMDIVKA 120
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 75/146 (51%), Gaps = 11/146 (7%)
Query: 36 LARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLFADRVFDL 93
L R T F E++ Y+ F K + G +NK EFQ F S FA+ VF++
Sbjct: 16 LVRSTRFDKKELQQWYKGFFKDCPS----GHLNKSEFQKIYKQFFPFGDPSAFAEYVFNV 71
Query: 94 FDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLT 153
FD NG +DF+EF ALS+ ++DK+ ++FQLYDL G I E+ ++V A
Sbjct: 72 FDADKNGYIDFKEFICALSV-TSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYK 130
Query: 154 ESGMNLS----DDVIESIIDKVLSLI 175
G + +D E ++K+ +++
Sbjct: 131 MVGSMVKLPEDEDTPEKRVNKIFNMM 156
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 71/126 (56%), Gaps = 10/126 (7%)
Query: 21 ADLYKQPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFK 78
A + +P LE EA ++ F+ E++ LY FK + G++N+E F+ + F
Sbjct: 43 ATVRHRPEALELLEAQSK---FTKKELQILYRGFKNECPS----GVVNEETFKEIYSQFF 95
Query: 79 TNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGF 138
+ +A +F+ FDT HNG + FE+F + LSI + + +K+ ++F LYD+ + G+
Sbjct: 96 PQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGT-VQEKLNWAFNLYDINKDGY 154
Query: 139 IERQEV 144
I ++E+
Sbjct: 155 ITKEEM 160
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 70/124 (56%), Gaps = 10/124 (8%)
Query: 29 GLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLF 86
GLE EA +T F+ E++ LY FK + G++N++ F+ A F + S +
Sbjct: 2 GLEQLEA---QTNFTKRELQVLYRGFKNECPS----GVVNEDTFKQIYAQFFPHGDASTY 54
Query: 87 ADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQ 146
A +F+ FDT G + FE+F ALSI + + +K+ ++F LYD+ + G+I ++E+
Sbjct: 55 AHYLFNAFDTTQTGSVKFEDFVTALSILLRGT-VHEKLRWTFNLYDINKDGYINKEEMMD 113
Query: 147 MVVA 150
+V A
Sbjct: 114 IVKA 117
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 70/124 (56%), Gaps = 10/124 (8%)
Query: 29 GLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLF 86
GLE EA +T F+ E++ LY FK + G++N++ F+ A F + S +
Sbjct: 2 GLEQLEA---QTNFTKRELQVLYRGFKNECPS----GVVNEDTFKQIYAQFFPHGDASTY 54
Query: 87 ADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQ 146
A +F+ FDT G + FE+F ALSI + + +K+ ++F LYD+ + G+I ++E+
Sbjct: 55 AHYLFNAFDTTQTGSVKFEDFVTALSILLRGT-VHEKLRWTFNLYDINKDGYINKEEMMD 113
Query: 147 MVVA 150
+V A
Sbjct: 114 IVKA 117
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 8/131 (6%)
Query: 42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGI 101
F EI+ L + FKK+ + + G ++ EEF ++L + +++ RV D+FDT NG
Sbjct: 14 FDADEIKRLGKRFKKLD--LDNSGSLSVEEF-MSLPEL--QQNPLVQRVIDIFDTDGNGE 68
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF+EF +S F + K+ F+F++YD+ + G+I E+ Q++ + G NL D
Sbjct: 69 VDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMV---GNNLKD 125
Query: 162 DVIESIIDKVL 172
++ I+DK +
Sbjct: 126 TQLQQIVDKTI 136
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 8/131 (6%)
Query: 42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGI 101
F EI+ L + FKK+ + + G ++ EEF ++L + +++ RV D+FDT NG
Sbjct: 15 FDADEIKRLGKRFKKLD--LDNSGSLSVEEF-MSLPEL--QQNPLVQRVIDIFDTDGNGE 69
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF+EF +S F + K+ F+F++YD+ + G+I E+ Q++ + G NL D
Sbjct: 70 VDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMV---GNNLKD 126
Query: 162 DVIESIIDKVL 172
++ I+DK +
Sbjct: 127 TQLQQIVDKTI 137
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 9/147 (6%)
Query: 34 EALARETVFSVSEIEALYELF-KKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFD 92
E L R+T F+ E++ Y+ F K S +D K Q F K FA VF+
Sbjct: 14 EELTRKTYFTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTK---FATFVFN 70
Query: 93 LFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATL 152
+FD +G ++F EF +ALS+ + +D+K+ ++F+LYDL G+I R E+ +V A
Sbjct: 71 VFDENKDGRIEFSEFIQALSVTSRGT-LDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIY 129
Query: 153 TESGMNL----SDDVIESIIDKVLSLI 175
G + ++ E +D++ +++
Sbjct: 130 QMVGNTVELPEEENTPEKRVDRIFAMM 156
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 74/127 (58%), Gaps = 8/127 (6%)
Query: 46 EIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFE 105
EI+ L + FKK+ + + G ++ EEF ++L + +++ RV D+FDT NG +DF+
Sbjct: 4 EIKRLGKRFKKLD--LDNSGSLSVEEF-MSLPEL--QQNPLVQRVIDIFDTDGNGEVDFK 58
Query: 106 EFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIE 165
EF +S F + K+ F+F++YD+ + G+I E+ Q++ + G NL D ++
Sbjct: 59 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMV---GNNLKDTQLQ 115
Query: 166 SIIDKVL 172
I+DK +
Sbjct: 116 QIVDKTI 122
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 74/127 (58%), Gaps = 8/127 (6%)
Query: 46 EIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFE 105
EI+ L + FKK+ + + G ++ EEF ++L + +++ RV D+FDT NG +DF+
Sbjct: 5 EIKRLGKRFKKLD--LDNSGSLSVEEF-MSLPEL--QQNPLVQRVIDIFDTDGNGEVDFK 59
Query: 106 EFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIE 165
EF +S F + K+ F+F++YD+ + G+I E+ Q++ + G NL D ++
Sbjct: 60 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMV---GNNLKDTQLQ 116
Query: 166 SIIDKVL 172
I+DK +
Sbjct: 117 QIVDKTI 123
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 68/121 (56%), Gaps = 10/121 (8%)
Query: 26 QPRGLEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQL--ALFKTNKKE 83
QP GL+ +A +T F+ E+++LY FK GL++++ F+L + F
Sbjct: 75 QPEGLDQLQA---QTKFTKKELQSLYRGFKNECPT----GLVDEDTFKLIYSQFFPQGDA 127
Query: 84 SLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQE 143
+ +A +F+ FD NG + FE+F LSI + + +K++++F LYD+ + G I ++E
Sbjct: 128 TTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGT-VHEKLKWAFNLYDINKDGCITKEE 186
Query: 144 V 144
+
Sbjct: 187 M 187
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 81/161 (50%), Gaps = 31/161 (19%)
Query: 31 EDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ----LALFKTNKKESLF 86
E+ E + +ET FS S+I LY F + ++G +++E+FQ LA+ +
Sbjct: 12 EELEEIKKETGFSHSQITRLYSRFTSLDKG--ENGTLSREDFQRIPELAI-------NPL 62
Query: 87 ADRVFDLFDTKHNGILDFEEFARALSIFHP----------NSP-----IDDKIEFSFQLY 131
DR+ + F ++ ++F F R L+ F P N P +K+ F+F+LY
Sbjct: 63 GDRIINAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLY 122
Query: 132 DLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVL 172
DL + I R E+ Q++ + G+N+SD+ + SI D+ +
Sbjct: 123 DLDKDDKISRDELLQVLRMMV---GVNISDEQLGSIADRTI 160
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 31/161 (19%)
Query: 31 EDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ----LALFKTNKKESLF 86
E+ E + +ET FS S+I LY F + ++G +++E+FQ LA+ +
Sbjct: 12 EELEEIKKETGFSHSQITRLYSRFTSLDKG--ENGTLSREDFQRIPELAI-------NPL 62
Query: 87 ADRVFDLFDTKHNGILDFEEFARALSIFHP----------NSP-----IDDKIEFSFQLY 131
DR+ + F + ++F F R L+ F P N P +K+ F+F+LY
Sbjct: 63 GDRIINAFFPEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLY 122
Query: 132 DLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVL 172
DL + I R E+ Q++ + G+N+SD+ + SI D+ +
Sbjct: 123 DLDKDEKISRDELLQVLRMMV---GVNISDEQLGSIADRTI 160
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
Query: 34 EALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLFADRVF 91
E L T F+ E+ + Y+ F K + G I ++EFQ + F +A VF
Sbjct: 14 EELQLNTKFTEEELSSWYQSFLKECPS----GRITRQEFQTIYSKFFPEADPKAYAQHVF 69
Query: 92 DLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA 150
FD +G LDF+E+ AL + + K+E++F LYD+ G I + EV ++V A
Sbjct: 70 RSFDANSDGTLDFKEYVIALHMTSAGK-TNQKLEWAFSLYDVDGNGTISKNEVLEIVTA 127
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
Query: 34 EALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLFADRVF 91
E L T F+ E+ + Y+ F K + G I ++EFQ + F +A VF
Sbjct: 15 EELQLNTKFTEEELSSWYQSFLKECPS----GRITRQEFQTIYSKFFPEADPKAYAQHVF 70
Query: 92 DLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA 150
FD +G LDF+E+ AL + + K+E++F LYD+ G I + EV ++V A
Sbjct: 71 RSFDANSDGTLDFKEYVIALHMTSAGK-TNQKLEWAFSLYDVDGNGTISKNEVLEIVTA 128
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
Query: 34 EALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLFADRVF 91
E L T F+ E+ + Y+ F K + G I ++EFQ + F +A VF
Sbjct: 14 EELQLNTKFTEEELSSWYQSFLKECPS----GRITRQEFQTIYSKFFPEADPKAYAQHVF 69
Query: 92 DLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA 150
FD +G LDF+E+ AL + + K+E++F LYD+ G I + EV ++V A
Sbjct: 70 RSFDANSDGTLDFKEYVIALHMTSAGK-TNQKLEWAFSLYDVDGNGTISKNEVLEIVTA 127
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
Query: 34 EALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLFADRVF 91
E L T F+ E+ + Y+ F K + G I ++EFQ + F +A VF
Sbjct: 14 EELQLNTKFTEEELSSWYQSFLKECPS----GRITRQEFQTIYSKFFPEADPKAYAQHVF 69
Query: 92 DLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA 150
FD +G LDF+E+ AL + + K+E++F LYD+ G I + EV ++V A
Sbjct: 70 RSFDANSDGTLDFKEYVIALHMTSAGK-TNQKLEWAFSLYDVDGNGTISKNEVLEIVTA 127
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Query: 36 LARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLFADRVFDL 93
L T F+ EI+ Y+ F + + G ++ EEF+ F S FA+ VF
Sbjct: 16 LLESTDFTEHEIQEWYKGFLRDCPS----GHLSMEEFKKIYGNFFPYGDASKFAEHVFRT 71
Query: 94 FDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA--T 151
FD +G +DF EF ALS+ ++ K++++F +YDL G+I + E+ ++V A
Sbjct: 72 FDANGDGTIDFREFIIALSV-TSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYK 130
Query: 152 LTESGMNLSDD 162
+ S M + +D
Sbjct: 131 MVSSVMKMPED 141
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
Query: 34 EALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLFADRVF 91
E L T F+ E+ + Y+ F K + G I ++EFQ + F +A VF
Sbjct: 14 EELQLNTKFTEEELSSWYQSFLKECPS----GRITRQEFQTIYSKFFPEADPKAYAQHVF 69
Query: 92 DLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA 150
FD +G LDF+++ AL + + K+E++F LYD+ G I + EV ++V A
Sbjct: 70 RSFDANSDGTLDFKQYVIALHMTSAGK-TNQKLEWAFSLYDVDGNGTISKNEVLEIVTA 127
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
Query: 34 EALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLFADRVF 91
E L T F+ E+ + Y+ F K + G I ++EFQ + F +A VF
Sbjct: 14 EELQLNTKFTEEELSSWYQSFLKECPS----GRITRQEFQTIYSKFFPEADPKAYAQHVF 69
Query: 92 DLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA 150
FD +G LDF+++ AL + + K+E++F LYD+ G I + EV ++V A
Sbjct: 70 RSFDANSDGTLDFKQYVIALHMTSAGK-TNQKLEWAFSLYDVDGNGTISKNEVLEIVTA 127
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
Query: 34 EALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLFADRVF 91
E L T FS E+ + Y+ F K G I +++FQ A F + +A VF
Sbjct: 22 EELQLNTKFSEEELCSWYQSFLKDCPT----GRITQQQFQSIYAKFFPDTDPKAYAQHVF 77
Query: 92 DLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA 150
FD+ +G LDF+E+ AL + K+E++F LYD+ G I + EV ++V A
Sbjct: 78 RSFDSNLDGTLDFKEYVIALHXTTAGK-TNQKLEWAFSLYDVDGNGTISKNEVLEIVXA 135
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 13/152 (8%)
Query: 31 EDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEF---QLALFKTNKKESLFA 87
+D L + T F EI+ ++ F + + G + +E+F F E FA
Sbjct: 11 DDLTCLKQSTYFDRREIQQWHKGFLRDCPS----GQLAREDFVKIYKQFFPFGSPED-FA 65
Query: 88 DRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQM 147
+ +F +FD +NG + FEEF LS +++K+ ++F+LYDL G+I E+ +
Sbjct: 66 NHLFTVFDKDNNGFIHFEEFITVLST-TSRGTLEEKLSWAFELYDLNHDGYITFDEMLTI 124
Query: 148 VVATLTESG----MNLSDDVIESIIDKVLSLI 175
V + G +N + E + K+ L+
Sbjct: 125 VASVYKMMGSMVTLNEDEATPEMRVKKIFKLM 156
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 65 GLINKEEFQ--LALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDD 122
GL EF+ L L N+K + D+V++ FDT +G +DF EF A+++ ++
Sbjct: 35 GLQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIM-QEKMEQ 93
Query: 123 KIEFSFQLYDLKQQGFIERQEVKQMVVATLTESG 156
K+++ F+LYD G I++ E+ M +A +G
Sbjct: 94 KLKWYFKLYDADGNGSIDKNELLDMFMAVQALNG 127
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 77/160 (48%), Gaps = 26/160 (16%)
Query: 30 LEDPEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ-LALFKTNKKESLFAD 88
+ D +++ RET FS + + L+ F+ + G +++ + Q + N D
Sbjct: 11 IPDGDSIRRETGFSQASLLRLHHRFRALDRN--KKGYLSRMDLQQIGALAVNP----LGD 64
Query: 89 RVFDLFDTKHNGILDFEEFARALSIFHP-------------NSPID---DKIEFSFQLYD 132
R+ + F + +DF F R L+ F P P++ +K+ ++FQLYD
Sbjct: 65 RIIESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYD 124
Query: 133 LKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVL 172
L + G I R E+ Q++ + G+ ++++ +E+I D+ +
Sbjct: 125 LDRDGKISRHEMLQVLRLMV---GVQVTEEQLENIADRTV 161
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 86 FADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 145
+ +++F+ FD +G +DF E+ ALS+ +D K+ + F+LYD+ G I+R E+
Sbjct: 53 YVEQMFETFDFNKDGYIDFMEYVAALSLV-LKGKVDQKLRWYFKLYDVDGNGCIDRGELL 111
Query: 146 QMVVA 150
++ A
Sbjct: 112 NIIKA 116
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 80 NKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFI 139
N++ + + + +F FDT + +DF E+ AL++ + ++ K++++F++YD + G I
Sbjct: 54 NEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGT-LEHKLKWTFKIYDKDRNGCI 112
Query: 140 ERQEVKQMV 148
+RQE+ +V
Sbjct: 113 DRQELLDIV 121
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
+SE + + LF K DG I +E + N E+ D + ++ D NG
Sbjct: 10 ISEFKEAFSLFDKDG-----DGCITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGT 63
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF EF ++ ++ +++++ +F+++D Q GFI E++ + +T G L+D
Sbjct: 64 IDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHV----MTNLGEKLTD 119
Query: 162 DVIESII 168
+ ++ +I
Sbjct: 120 EEVDEMI 126
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
+SE + + LF K DG I +E + N E+ D + ++ D NG
Sbjct: 10 ISEFKEAFSLFDKDG-----DGCITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGT 63
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF EF ++ ++ +++++ +F+++D Q GFI E++ + +T G L+D
Sbjct: 64 IDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHV----MTNLGEKLTD 119
Query: 162 DVIESII 168
+ ++ +I
Sbjct: 120 EEVDEMI 126
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 62/127 (48%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
++E + + LF K DG I +E + N E+ D + ++ D NG
Sbjct: 310 IAEFKEAFSLFDKDG-----DGTITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGT 363
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF EF ++ + ++ +++I +F+++D G+I E++ + +T G L+D
Sbjct: 364 IDFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV----MTNLGEKLTD 419
Query: 162 DVIESII 168
+ ++ +I
Sbjct: 420 EEVDEMI 426
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 62/127 (48%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
++E + + LF K DG I +E + N E+ D + ++ D NG
Sbjct: 9 IAEFKEAFSLFDKDG-----DGTITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGT 62
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF EF ++ ++ ++K++ +F+++D GFI E++ + +T G L+D
Sbjct: 63 IDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHV----MTNLGEKLTD 118
Query: 162 DVIESII 168
+ ++ +I
Sbjct: 119 EEVDEMI 125
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 82 KESLFADRVFDLFDTKH-NGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIE 140
K + F +R+ +F T L FE+F LS+F + D K ++F+++D G +
Sbjct: 57 KANPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLN 116
Query: 141 RQEVKQMVVATLTESG--MNLSDDVIESIIDKVL 172
R+++ ++ V LT G LS ++ +ID +L
Sbjct: 117 REDLSRL-VNCLTGEGEDTRLSASEMKQLIDNIL 149
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 82 KESLFADRVFDLFDTKH-NGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIE 140
K + F +R+ +F T L FE+F LS+F + D K ++F+++D G +
Sbjct: 88 KANPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLN 147
Query: 141 RQEVKQMVVATLTESG--MNLSDDVIESIIDKVL 172
R+++ ++ V LT G LS ++ +ID +L
Sbjct: 148 REDLSRL-VNCLTGEGEDTRLSASEMKQLIDNIL 180
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 60/127 (47%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
V+E + + LF K DG I E + N E+ D + ++ D NG
Sbjct: 9 VTEFKEAFSLFDKDG-----DGCITTRELGTVMRSLGQNPTEAELRDMMSEI-DRDGNGT 62
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF EF ++ ++ +++I +F+++D GF+ E++ + +T G LSD
Sbjct: 63 VDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHV----MTRLGEKLSD 118
Query: 162 DVIESII 168
+ ++ +I
Sbjct: 119 EEVDEMI 125
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
++E + + LF K DG I +E + N E+ D + ++ D NG
Sbjct: 9 IAEFKEAFSLFDKDG-----DGTITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGT 62
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF EF ++ ++ +++I +F+++D GFI E++ + +T G L+D
Sbjct: 63 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHV----MTNLGEKLTD 118
Query: 162 DVIESII 168
+ ++ +I
Sbjct: 119 EEVDEMI 125
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
++E + + LF K DG I +E + N E+ D + ++ D NG
Sbjct: 10 IAEFKEAFSLFDKDG-----DGTITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGT 63
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF EF ++ ++ +++I +F+++D GFI E++ + +T G L+D
Sbjct: 64 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHV----MTNLGEKLTD 119
Query: 162 DVIESII 168
+ ++ +I
Sbjct: 120 EEVDEMI 126
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
++E + + LF K DG I +E + N E+ D + ++ D NG
Sbjct: 10 IAEFKEAFSLFDKDG-----DGTITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGT 63
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF EF ++ ++ +++I +F+++D GFI E++ + +T G L+D
Sbjct: 64 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHV----MTNLGEKLTD 119
Query: 162 DVIESII 168
+ ++ +I
Sbjct: 120 EEVDEMI 126
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
++E + + LF K DG I +E + N E+ D + ++ D NG
Sbjct: 9 IAEFKEAFSLFDKDG-----DGTITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGT 62
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF EF ++ ++ +++I +F+++D GFI E++ + +T G L+D
Sbjct: 63 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHV----MTNLGEKLTD 118
Query: 162 DVIESII 168
+ ++ +I
Sbjct: 119 EEVDEMI 125
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
++E + + LF K DG I +E + N E+ D + ++ D NG
Sbjct: 10 IAEFKEAFSLFDKDG-----DGTITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGT 63
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF EF ++ ++ +++I +F+++D GFI E++ + +T G L+D
Sbjct: 64 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHV----MTNLGEKLTD 119
Query: 162 DVIESII 168
+ ++ +I
Sbjct: 120 EEVDEMI 126
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
++E + + LF K DG I +E + N E+ D + ++ D NG
Sbjct: 273 IAEFKEAFSLFDKDG-----DGTITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGT 326
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF EF ++ ++ +++I +F+++D G+I E++ + +T G L+D
Sbjct: 327 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV----MTNLGEKLTD 382
Query: 162 DVIESII 168
+ ++ +I
Sbjct: 383 EEVDEMI 389
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
++E + + LF K DG I +E + N E+ D + ++ D NG
Sbjct: 310 IAEFKEAFSLFDKDG-----DGTITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGT 363
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF EF ++ ++ +++I +F+++D G+I E++ + +T G L+D
Sbjct: 364 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV----MTNLGEKLTD 419
Query: 162 DVIESII 168
+ ++ +I
Sbjct: 420 EEVDEMI 426
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
++E + + LF K DG I +E + N E+ D + ++ D NG
Sbjct: 276 IAEFKEAFSLFDKDG-----DGTITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGT 329
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF EF ++ ++ +++I +F+++D G+I E++ + +T G L+D
Sbjct: 330 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV----MTNLGEKLTD 385
Query: 162 DVIESII 168
+ ++ +I
Sbjct: 386 EEVDEMI 392
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
++E + + LF K DG I +E + N E+ D + ++ D NG
Sbjct: 311 IAEFKEAFSLFDKDG-----DGTITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGT 364
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF EF ++ ++ +++I +F+++D G+I E++ + +T G L+D
Sbjct: 365 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV----MTNLGEKLTD 420
Query: 162 DVIESII 168
+ ++ +I
Sbjct: 421 EEVDEMI 427
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
++E + + LF K DG I +E + N E+ D + ++ D NG
Sbjct: 276 IAEFKEAFSLFDKDG-----DGTITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGT 329
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF EF ++ ++ +++I +F+++D G+I E++ + +T G L+D
Sbjct: 330 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV----MTNLGEKLTD 385
Query: 162 DVIESII 168
+ ++ +I
Sbjct: 386 EEVDEMI 392
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
++E + + LF K DG I +E + N E+ D + ++ D NG
Sbjct: 310 IAEFKEAFSLFDKDG-----DGTITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGT 363
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF EF ++ ++ +++I +F+++D G+I E++ + +T G L+D
Sbjct: 364 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV----MTNLGEKLTD 419
Query: 162 DVIESII 168
+ ++ +I
Sbjct: 420 EEVDEMI 426
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 62/127 (48%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
++E + + LF K DG I +E + N E+ D + ++ D NG
Sbjct: 6 IAEFKEAFSLFDKDG-----DGTITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGT 59
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF EF ++ ++ +++++ +F+++D GFI E++ + +T G L+D
Sbjct: 60 IDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHV----MTNLGEKLTD 115
Query: 162 DVIESII 168
+ ++ +I
Sbjct: 116 EEVDEMI 122
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
++E + + LF K DG I +E + N E+ D + ++ D NG
Sbjct: 10 IAEFKEAFSLFDKDG-----DGTITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGT 63
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF EF ++ ++ +++I +F+++D G+I E++ + +T G L+D
Sbjct: 64 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV----MTNLGEKLTD 119
Query: 162 DVIESII 168
+ ++ +I
Sbjct: 120 EEVDQMI 126
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
++E + + LF K DG I +E + N E+ D + ++ D NG
Sbjct: 10 IAEFKEAFSLFDKDG-----DGTITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGT 63
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF EF ++ ++ +++I +F+++D G+I E++ + +T G L+D
Sbjct: 64 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV----MTNLGEKLTD 119
Query: 162 DVIESII 168
+ ++ +I
Sbjct: 120 EEVDEMI 126
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 35.8 bits (81), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 62/127 (48%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
++E + + LF K DG I +E + N E+ D + ++ D NG
Sbjct: 9 IAEFKEAFSLFDKDG-----DGTITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGT 62
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF EF ++ ++ +++++ +F+++D GFI E++ + +T G L+D
Sbjct: 63 IDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHV----MTNLGEKLTD 118
Query: 162 DVIESII 168
+ ++ +I
Sbjct: 119 EEVDEMI 125
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 35.8 bits (81), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
++E + + LF K DG I +E + N E+ D + ++ D NG
Sbjct: 6 IAEFKEAFSLFDKDG-----DGTITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGT 59
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF EF ++ ++ +++I +F+++D G+I E++ + +T G L+D
Sbjct: 60 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV----MTNLGEKLTD 115
Query: 162 DVIESII 168
+ ++ +I
Sbjct: 116 EEVDEMI 122
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 35.8 bits (81), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
++E + + LF K DG I +E + N E+ D + ++ D NG
Sbjct: 10 IAEFKEAFSLFDKDG-----DGTITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGT 63
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF EF ++ ++ +++I +F+++D G+I E++ + +T G L+D
Sbjct: 64 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV----MTNLGEKLTD 119
Query: 162 DVIESII 168
+ ++ +I
Sbjct: 120 EEVDEMI 126
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 35.8 bits (81), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
++E + + LF K DG I +E + N E+ D + ++ D NG
Sbjct: 9 IAEFKEAFSLFDKDG-----DGTITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGT 62
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF EF ++ ++ +++I +F+++D G+I E++ + +T G L+D
Sbjct: 63 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV----MTNLGEKLTD 118
Query: 162 DVIESII 168
+ ++ +I
Sbjct: 119 EEVDEMI 125
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
++E + + LF K DG I +E + N E+ D + ++ D NG
Sbjct: 10 IAEFKEAFSLFDKDG-----DGTITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGT 63
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF EF ++ ++ +++I +F+++D G+I E++ + +T G L+D
Sbjct: 64 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV----MTNLGEKLTD 119
Query: 162 DVIESII 168
+ ++ +I
Sbjct: 120 EEVDEMI 126
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
++E + + LF K DG I +E + N E+ D + ++ D NG
Sbjct: 10 IAEFKEAFSLFDKDG-----DGTITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGT 63
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF EF ++ ++ +++I +F+++D G+I E++ + +T G L+D
Sbjct: 64 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV----MTNLGEKLTD 119
Query: 162 DVIESII 168
+ ++ +I
Sbjct: 120 EEVDEMI 126
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
++E + + LF K DG I +E + N E+ D + ++ D NG
Sbjct: 7 IAEFKEAFSLFDKDG-----DGTITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGT 60
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF EF ++ ++ +++I +F+++D G+I E++ + +T G L+D
Sbjct: 61 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV----MTNLGEKLTD 116
Query: 162 DVIESII 168
+ ++ +I
Sbjct: 117 EEVDEMI 123
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
++E + + LF K DG I +E + N E+ D + ++ D NG
Sbjct: 11 IAEFKEAFSLFDKDG-----DGTITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGT 64
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF EF ++ ++ +++I +F+++D G+I E++ + +T G L+D
Sbjct: 65 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV----MTNLGEKLTD 120
Query: 162 DVIESII 168
+ ++ +I
Sbjct: 121 EEVDEMI 127
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
++E + + LF K DG I +E + N E+ D + ++ D NG
Sbjct: 9 IAEFKEAFSLFDKDG-----DGTITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGT 62
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF EF ++ ++ +++I +F+++D G+I E++ + +T G L+D
Sbjct: 63 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV----MTNLGEKLTD 118
Query: 162 DVIESII 168
+ ++ +I
Sbjct: 119 EEVDEMI 125
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 55/107 (51%), Gaps = 7/107 (6%)
Query: 64 DGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNSPID 121
DG I EE + N E D + ++ D NG ++F+EF ++ ++ +
Sbjct: 24 DGCITVEELATVIRSLDQNPTEEELQDMISEV-DADGNGTIEFDEFLSLMAKKVKDTDAE 82
Query: 122 DKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESII 168
++++ +F+++D Q G+I E++ +++ G L+D+ +E +I
Sbjct: 83 EELKEAFKVFDKDQNGYISASELRHVMINL----GEKLTDEEVEQMI 125
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
++E + + LF K DG I +E + N E+ D + ++ D NG
Sbjct: 15 IAEFKEAFSLFDKDG-----DGTITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGT 68
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF EF ++ ++ +++I +F+++D G+I E++ + +T G L+D
Sbjct: 69 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV----MTNLGEKLTD 124
Query: 162 DVIESII 168
+ ++ +I
Sbjct: 125 EEVDEMI 131
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
++E + + LF K DG I +E + N E+ D + ++ D NG
Sbjct: 9 IAEFKEAFSLFDKDG-----DGTITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGT 62
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF EF ++ ++ +++I +F+++D G+I E++ + +T G L+D
Sbjct: 63 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV----MTNLGEKLTD 118
Query: 162 DVIESII 168
+ ++ +I
Sbjct: 119 EEVDEMI 125
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
++E + + LF K DG I +E + N E+ D + ++ D NG
Sbjct: 7 IAEFKEAFSLFDKDG-----DGTITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGT 60
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF EF ++ ++ +++I +F+++D G+I E++ + +T G L+D
Sbjct: 61 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV----MTNLGEKLTD 116
Query: 162 DVIESII 168
+ ++ +I
Sbjct: 117 EEVDEMI 123
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
++E + + LF K DG I +E + N E+ D + ++ D NG
Sbjct: 13 IAEFKEAFSLFDKDG-----DGTITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGT 66
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF EF ++ ++ +++I +F+++D G+I E++ + +T G L+D
Sbjct: 67 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV----MTNLGEKLTD 122
Query: 162 DVIESII 168
+ ++ +I
Sbjct: 123 EEVDEMI 129
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
++E + + LF K DG I +E + N E+ D + ++ D NG
Sbjct: 5 IAEFKEAFSLFDKDG-----DGTITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGT 58
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF EF ++ ++ +++I +F+++D G+I E++ + +T G L+D
Sbjct: 59 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV----MTNLGEKLTD 114
Query: 162 DVIESII 168
+ ++ +I
Sbjct: 115 EEVDEMI 121
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 35.4 bits (80), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
++E + + LF K DG I +E + N E+ D + ++ D NG
Sbjct: 7 IAEFKEAFSLFDKDG-----DGTITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGT 60
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF EF ++ ++ +++I +F+++D G+I E++ + +T G L+D
Sbjct: 61 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV----MTNLGEKLTD 116
Query: 162 DVIESII 168
+ ++ +I
Sbjct: 117 EEVDEMI 123
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 35.4 bits (80), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
++E + + LF K DG I +E + N E+ D + ++ D NG
Sbjct: 10 IAEFKEAFSLFDKDG-----DGTITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGT 63
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF EF ++ ++ +++I +F+++D G+I E++ + +T G L+D
Sbjct: 64 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV----MTNLGEXLTD 119
Query: 162 DVIESII 168
+ ++ +I
Sbjct: 120 EEVDEMI 126
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 35.4 bits (80), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
++E + + LF K DG I +E + N E+ D + ++ D NG
Sbjct: 9 IAEFKEAFSLFDKDG-----DGTITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGT 62
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF EF ++ ++ +++I +F+++D G+I E++ + +T G L+D
Sbjct: 63 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV----MTNLGEXLTD 118
Query: 162 DVIESII 168
+ ++ +I
Sbjct: 119 EEVDEMI 125
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 35.4 bits (80), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
++E + + LF K DG I +E + N E+ D + ++ D NG
Sbjct: 8 IAEFKEAFSLFDKDG-----DGTITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGT 61
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF EF ++ ++ +++I +F+++D G+I E++ + +T G L+D
Sbjct: 62 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV----MTNLGEKLTD 117
Query: 162 DVIESII 168
+ ++ +I
Sbjct: 118 EEVDEMI 124
>pdb|1QLS|A Chain A, S100c (S100a11),Or Calgizzarin, In Complex With Annexin I
N-Terminus
Length = 99
Score = 35.4 bits (80), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 47 IEALYELFKKISSAVIDDGLINKEEF------QLALFKTNKKESLFADRVFDLFDTKHNG 100
IE+L +F+K + ++ I+K EF +LA F N+K+ DR+ D +G
Sbjct: 12 IESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDG 71
Query: 101 ILDFEEF 107
LDF+EF
Sbjct: 72 QLDFQEF 78
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 34.7 bits (78), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 60/127 (47%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
++E + + LF K DG I +E + N E+ D + ++ D NG
Sbjct: 310 IAEFKEAFSLFDKDG-----DGTITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGT 363
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF EF ++ + +++I +F+++D G+I E++ + +T G L+D
Sbjct: 364 IDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHV----MTNLGEKLTD 419
Query: 162 DVIESII 168
+ ++ +I
Sbjct: 420 EEVDEMI 426
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 34.3 bits (77), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 66/132 (50%), Gaps = 20/132 (15%)
Query: 46 EIEALYELFKKISSAVIDDGLINKEEFQLAL----FKTNKKE--SLFADRVFDLFDTKHN 99
EI ++LF S G I+ +E ++A+ F+ K+E + AD D +
Sbjct: 9 EIREAFDLFDTDGS-----GTIDAKELKVAMRALGFEPKKEEIKKMIAD-----IDKDGS 58
Query: 100 GILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNL 159
G +DFEEF + ++ ++I +F+L+D + G I + +K++ E G N+
Sbjct: 59 GTIDFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVA----KELGENM 114
Query: 160 SDDVIESIIDKV 171
+D+ ++ +ID+
Sbjct: 115 TDEELQEMIDEA 126
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 33.9 bits (76), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
++E + + LF K DG I +E + N E+ D + ++ D +G
Sbjct: 309 IAEFKEAFSLFDKDG-----DGTITTKELGTVMRSLGQNPTEAELQDMINEV-DADGDGT 362
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF EF ++ ++ +++I +F+++D G+I E++ + +T G L+D
Sbjct: 363 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV----MTNLGEKLTD 418
Query: 162 DVIESII 168
+ ++ +I
Sbjct: 419 EEVDEMI 425
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 33.9 bits (76), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 64/138 (46%), Gaps = 15/138 (10%)
Query: 33 PEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRV 90
P+ L E ++E + + LF K DG I +E + N E+ D +
Sbjct: 301 PDQLTEE---QIAEFKEAFSLFDKDG-----DGTITTKELGTVMRSLGQNPTEAELQDMI 352
Query: 91 FDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA 150
++ D +G +DF EF ++ + +++I +F+++D G+I E++ +
Sbjct: 353 NEV-DADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHV--- 408
Query: 151 TLTESGMNLSDDVIESII 168
+T G L+D+ ++ +I
Sbjct: 409 -MTNLGEKLTDEEVDEMI 425
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 33.9 bits (76), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 64/138 (46%), Gaps = 15/138 (10%)
Query: 33 PEALARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRV 90
P+ L E ++E + + LF K DG I +E + N E+ D +
Sbjct: 301 PDQLTEE---QIAEFKEAFSLFDKDG-----DGTITTKELGTVMRSLGQNPTEAELQDMI 352
Query: 91 FDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVA 150
++ D +G +DF EF ++ + +++I +F+++D G+I E++ +
Sbjct: 353 NEV-DADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHV--- 408
Query: 151 TLTESGMNLSDDVIESII 168
+T G L+D+ ++ +I
Sbjct: 409 -MTNLGEKLTDEEVDEMI 425
>pdb|1NSH|A Chain A, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
pdb|1NSH|B Chain B, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
Length = 101
Score = 33.9 bits (76), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Query: 47 IEALYELFKKISSAVIDDGLINKEEF------QLALFKTNKKESLFADRVFDLFDTKHNG 100
IE+L +F+K + ++K EF +LA F N+K+ DR+ D +G
Sbjct: 10 IESLIAVFQKYAGKDGHSVTLSKTEFLSFMNTELAAFTKNQKDPGVLDRMMKKLDLNSDG 69
Query: 101 ILDFEEF 107
LDF+EF
Sbjct: 70 QLDFQEF 76
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 33.5 bits (75), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
++E + + LF K DG I +E + N E+ D + ++ D +G
Sbjct: 9 IAEFKEAFSLFDKDG-----DGTITTKELGTVMRSLGQNPTEAELQDMINEV-DADGDGT 62
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF EF ++ ++ +++I +F+++D G+I E++ + +T G L+D
Sbjct: 63 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV----MTNLGEKLTD 118
Query: 162 DVIESII 168
+ ++ +I
Sbjct: 119 EEVDEMI 125
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 33.1 bits (74), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 78/170 (45%), Gaps = 20/170 (11%)
Query: 4 CLDGLKHFCVVVVN--CCDADLYKQPRGLEDP-EALARETVFSVSEIEALYELFKKISSA 60
CL + H V VN A + K+ +G E + L E ++E + + LF K
Sbjct: 263 CL--VYHAQVRGVNFPSNGAVMQKKTKGWEPTRDQLTEE---QIAEFKEAFSLFDKDG-- 315
Query: 61 VIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPNS 118
DG I +E + N E+ D + ++ D +G +DF EF ++ ++
Sbjct: 316 ---DGTITTKELGTVMRSLGQNPTEAELQDMINEV-DADGDGTIDFPEFLIMMARKMKDT 371
Query: 119 PIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESII 168
+++I +F+++D G+I E++ + +T G L+D+ ++ +I
Sbjct: 372 DSEEEIREAFRVFDKDGNGYISAAELRHV----MTNLGEKLTDEEVDEMI 417
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 60/127 (47%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
++E + + LF K DG I +E + N E+ D + ++ D +G
Sbjct: 310 IAEFKEAFSLFDKDG-----DGTITTKELGTVMRSLGQNPTEAELQDMINEV-DADGDGT 363
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF EF ++ + +++I +F+++D G+I E++ + +T G L+D
Sbjct: 364 IDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHV----MTNLGEKLTD 419
Query: 162 DVIESII 168
+ ++ +I
Sbjct: 420 EEVDEMI 426
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 64 DGLINKEEFQLALFKTNKKESL--FADRVFDLFDTKHNGILDFEEFARALSIFHPNSPID 121
+G N LA + N+ + + D VFD+FD +G + +E+ +A SP +
Sbjct: 90 EGWKNLANADLAKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEW-KAYGRISGISPSE 148
Query: 122 DKIEFSFQLYDLKQQGFIERQEVKQMVVA 150
+ E +FQ DL G ++ E+ + +
Sbjct: 149 EDCEKTFQHCDLDNSGELDVDEMTRQHLG 177
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 58/127 (45%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
++E + + LF K DG I +E + N E+ D + ++ D NG
Sbjct: 9 IAEFKEAFALFDKDG-----DGTITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGT 62
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF EF ++ ++++ +F+++D G I E++ + +T G L+D
Sbjct: 63 IDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHV----MTNLGEKLTD 118
Query: 162 DVIESII 168
D ++ +I
Sbjct: 119 DEVDEMI 125
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 58/127 (45%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
++E + + LF K DG I +E + N E+ D + ++ D NG
Sbjct: 9 IAEFKEAFALFDKDG-----DGTITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGT 62
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF EF ++ ++++ +F+++D G I E++ + +T G L+D
Sbjct: 63 IDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHV----MTNLGEKLTD 118
Query: 162 DVIESII 168
D ++ +I
Sbjct: 119 DEVDEMI 125
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 31.2 bits (69), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
Query: 86 FADRVFDLFDTKHNGILDFEEFARALSI-------FHPNSPIDDKIEFSFQLYDLKQQGF 138
+ D + LFD+ ++G L+ E AR L + F + +F+LYD G+
Sbjct: 148 YTDLMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGY 207
Query: 139 IERQEVKQMV 148
I+ E+ ++
Sbjct: 208 IDENELDALL 217
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 31.2 bits (69), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 51/97 (52%), Gaps = 11/97 (11%)
Query: 76 LFKTNKKESLFADRVFDLFDTKHNGILDFEEF----ARALSIFHPNSPIDDKIEFSFQLY 131
L +T KE L D + + D +G +DFEEF R + ++++ F+++
Sbjct: 46 LGQTPTKEEL--DAIIEEVDEDGSGTIDFEEFLVMMVRQMKE-DAKGKSEEELAECFRIF 102
Query: 132 DLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESII 168
D G+I+ +E+ ++ A SG +++D+ IES++
Sbjct: 103 DRNADGYIDAEELAEIFRA----SGEHVTDEEIESLM 135
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 31.2 bits (69), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 19/125 (15%)
Query: 50 LYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLF----ADRVFDLFDTKHNGILDFE 105
L+ +F+++ G+I+ E Q AL +N + F + +FD ++ ++F
Sbjct: 9 LWNVFQRVDKD--RSGVISDTELQQAL--SNGTWTPFNPVTVRSIISMFDRENKAGVNFS 64
Query: 106 EFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIE 165
EF + F+ YD G I++ E+KQ L+ +G LSD +
Sbjct: 65 EFTGVWKYITDWQNV-------FRTYDRDNSGMIDKNELKQ----ALSGAGYRLSDQFHD 113
Query: 166 SIIDK 170
+I K
Sbjct: 114 ILIRK 118
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 30.8 bits (68), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 57/127 (44%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
++E + + LF K DG I +E N E+ D + ++ D NG
Sbjct: 10 IAEFKEAFSLFDKDG-----DGTITTKELGTVXRSLGQNPTEAELQDXINEV-DADGNGT 63
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF EF + ++ +++I +F+++D G+I E++ + T G L+D
Sbjct: 64 IDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVX----TNLGEKLTD 119
Query: 162 DVIESII 168
+ ++ I
Sbjct: 120 EEVDQXI 126
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 30.8 bits (68), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 11/97 (11%)
Query: 76 LFKTNKKESLFADRVFDLFDTKHNGILDFEEF----ARALSIFHPNSPIDDKIEFSFQLY 131
L +T KE L D + + D +G +DFEEF R + ++ E F+++
Sbjct: 46 LGQTPTKEEL--DAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAEL-FRIF 102
Query: 132 DLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESII 168
D G+I+ +E+ ++ A SG +++D+ IES++
Sbjct: 103 DRNADGYIDAEELAEIFRA----SGEHVTDEEIESLM 135
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 30.8 bits (68), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 57/127 (44%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
++E + + LF K DG I +E N E+ D + ++ D NG
Sbjct: 9 IAEFKEAFSLFDKDG-----DGTITTKELGTVXRSLGQNPTEAELQDXINEV-DADGNGT 62
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF EF + ++ +++I +F+++D G+I E++ + T G L+D
Sbjct: 63 IDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVX----TNLGEKLTD 118
Query: 162 DVIESII 168
+ ++ I
Sbjct: 119 EEVDEXI 125
>pdb|2BE4|A Chain A, X-ray Structure An Ef-hand Protein From Danio Rerio
Dr.36843
pdb|2Q4U|A Chain A, Ensemble Refinement Of The Crystal Structure Of An Ef-Hand
Protein From Danio Rerio Dr.36843
Length = 272
Score = 30.8 bits (68), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 21/107 (19%)
Query: 63 DDGLINKEE----FQLALFKTNKKESLFADRVFDL-------FDTKHNGILDFEEFARA- 110
D+G I +E F+ L K K+ + +RV + +D +G L EE A
Sbjct: 24 DNGYIEGKELDDFFRHXLKKLQPKDKITDERVQQIKKSFXSAYDATFDGRLQIEELANXI 83
Query: 111 -------LSIFHPNSPIDDKIEFS--FQLYDLKQQGFIERQEVKQMV 148
L IF +P+D+ +EF ++ YD G+I E+K +
Sbjct: 84 LPQEENFLLIFRREAPLDNSVEFXKIWRKYDADSSGYISAAELKNFL 130
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 30.4 bits (67), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 57/127 (44%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
++E + + LF K DG I +E N E+ D + ++ D NG
Sbjct: 9 IAEFKEAFSLFDKDG-----DGTITTKELGTVXRSLGCNPTEAELQDXINEV-DADGNGT 62
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
++F EF + ++ +++I +F+++D G+I E++ + T G L+D
Sbjct: 63 INFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVX----TNLGEKLTD 118
Query: 162 DVIESII 168
+ ++ I
Sbjct: 119 EEVDEXI 125
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 30.0 bits (66), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 13/55 (23%), Positives = 30/55 (54%)
Query: 95 DTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVV 149
D NG +DF EF ++ ++ +++I +F+++D G+I E++ ++
Sbjct: 11 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 65
>pdb|2JXC|A Chain A, Structure Of The Eps15-Eh2 Stonin2 Complex
Length = 100
Score = 30.0 bits (66), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 18/23 (78%)
Query: 89 RVFDLFDTKHNGILDFEEFARAL 111
RV++L D H+G+LD +EFA A+
Sbjct: 52 RVWELSDIDHDGMLDRDEFAVAM 74
>pdb|1FF1|A Chain A, Structure Of The Second Eps15 Homology Domain Of Human
Eps15 In Complex With Ptgssstnpfl
Length = 95
Score = 30.0 bits (66), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 18/23 (78%)
Query: 89 RVFDLFDTKHNGILDFEEFARAL 111
RV++L D H+G+LD +EFA A+
Sbjct: 47 RVWELSDIDHDGMLDRDEFAVAM 69
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 30.0 bits (66), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 8/87 (9%)
Query: 89 RVFDLFDTKHNGILDFEEF----ARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEV 144
++ D FD NG +DF+ F AR L + ++ +F+LYD + G+I +V
Sbjct: 54 QLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYI-STDV 112
Query: 145 KQMVVATLTESGMNLSDDVIESIIDKV 171
+ ++A L E+ LS + ++++ID++
Sbjct: 113 MREILAELDET---LSSEDLDAMIDEI 136
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 30.0 bits (66), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 53/125 (42%), Gaps = 21/125 (16%)
Query: 50 LYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLF----ADRVFDLFDTKHNGILDFE 105
L+ +F+++ G+I+ E Q AL +N + F + +FD ++ ++F
Sbjct: 6 LWNVFQRVDKDR--SGVISDTELQQAL--SNGTWTPFNPVTVRSIISMFDRENKAGVNFS 61
Query: 106 EFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIE 165
EF + F+ YD G I++ E+KQ + SG LSD +
Sbjct: 62 EFTGVWKYITDWQNV-------FRTYDRDNSGMIDKNELKQAL------SGYRLSDQFHD 108
Query: 166 SIIDK 170
+I K
Sbjct: 109 ILIRK 113
>pdb|1F8H|A Chain A, Structure Of The Second Eps15 Homology Domain Of Human
Eps15 In Complex With Ptgssstnpfr
Length = 95
Score = 29.6 bits (65), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 18/23 (78%)
Query: 89 RVFDLFDTKHNGILDFEEFARAL 111
RV++L D H+G+LD +EFA A+
Sbjct: 47 RVWELSDIDHDGMLDRDEFAVAM 69
>pdb|1EH2|A Chain A, Structure Of The Second Eps15 Homology Domain Of Human
Eps15, Nmr, 20 Structures
Length = 106
Score = 29.6 bits (65), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 18/23 (78%)
Query: 89 RVFDLFDTKHNGILDFEEFARAL 111
RV++L D H+G+LD +EFA A+
Sbjct: 52 RVWELSDIDHDGMLDRDEFAVAM 74
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 29.6 bits (65), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 86 FADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 145
+ D VFD+FD +G + +E+ +A SP + E +F+ DL G ++ E+
Sbjct: 114 WGDAVFDIFDKDGSGTITLDEW-KAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMT 172
Query: 146 Q 146
+
Sbjct: 173 R 173
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 29.6 bits (65), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 86 FADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 145
+ D VFD+FD +G + +E+ +A SP + E +F+ DL G ++ E+
Sbjct: 114 WGDAVFDIFDKDGSGTITLDEW-KAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMT 172
Query: 146 Q 146
+
Sbjct: 173 R 173
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 29.6 bits (65), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 53/125 (42%), Gaps = 19/125 (15%)
Query: 50 LYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLF----ADRVFDLFDTKHNGILDFE 105
L+ +F+++ G+I+ E Q AL +N + F + +FD ++ ++F
Sbjct: 28 LWNVFQRVDKD--RSGVISDNELQQAL--SNGTWTPFNPVTVRSIISMFDRENKAGVNFS 83
Query: 106 EFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIE 165
EF + F+ YD G I++ E+KQ L+ G LSD +
Sbjct: 84 EFTGVWKYITDWQNV-------FRTYDRDNSGMIDKNELKQ----ALSGFGYRLSDQFHD 132
Query: 166 SIIDK 170
+I K
Sbjct: 133 ILIRK 137
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 29.6 bits (65), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 53 LFKKISSAVIDDGLINKEEFQLALFKTN--KKESLFADRVFDLFDTKHNGILDFEEFARA 110
LFK+I V DG ++ EE + + K K E L +F D NG +D EFA+
Sbjct: 5 LFKEID--VNGDGAVSYEEVKAFVSKKRAIKNEQLLQ-LIFKSIDADGNGEIDQNEFAKF 61
Query: 111 LSIFHPNSPIDDKIEFS--FQLYDLKQQGFIERQEV 144
DDKI ++L D+ G + ++EV
Sbjct: 62 YGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEV 97
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 53 LFKKISSAVIDDGLINKEEFQLALFKTN--KKESLFADRVFDLFDTKHNGILDFEEFARA 110
LFK+I V DG ++ EE + + K K E L +F D NG +D EFA+
Sbjct: 5 LFKEID--VNGDGAVSYEEVKAFVSKKRAIKNEQLLQ-LIFKSIDADGNGEIDQNEFAKF 61
Query: 111 LSIFHPNSPIDDKIEFS--FQLYDLKQQGFIERQEV 144
DDKI ++L D+ G + ++EV
Sbjct: 62 YGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEV 97
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 86 FADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 145
+ D VFD+FD +G + +E+ +A SP + E +F+ DL G ++ E+
Sbjct: 114 WGDAVFDIFDKDGSGTITLDEW-KAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMT 172
Query: 146 Q 146
+
Sbjct: 173 R 173
>pdb|1QV0|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1QV1|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1SL9|A Chain A, Obelin From Obelia Longissima
Length = 195
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 86 FADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 145
+ D VFD+FD +G + +E+ +A SP + E +F+ DL G ++ E+
Sbjct: 114 WGDAVFDIFDKDGSGTITLDEW-KAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMT 172
Query: 146 Q 146
+
Sbjct: 173 R 173
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 53/125 (42%), Gaps = 19/125 (15%)
Query: 50 LYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLF----ADRVFDLFDTKHNGILDFE 105
L+ +F+++ G+I+ E Q AL +N + F + +FD ++ ++F
Sbjct: 9 LWNVFQRVDKD--RSGVISDTELQQAL--SNGTWTPFNPVTVRSIISMFDRENKAGVNFS 64
Query: 106 EFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIE 165
EF + F+ YD G I++ E+KQ L+ G LSD +
Sbjct: 65 EFTGVWKYITDWQNV-------FRTYDRDNSGMIDKNELKQ----ALSGFGYRLSDQFHD 113
Query: 166 SIIDK 170
+I K
Sbjct: 114 ILIRK 118
>pdb|1SL7|A Chain A, Crystal Structure Of Calcium-Loaded Apo-Obelin From Obelia
Longissima
Length = 195
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 86 FADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVK 145
+ D VFD+FD +G + +E+ +A SP + E +F+ DL G ++ E+
Sbjct: 114 WGDAVFDIFDKDGSGTITLDEW-KAYGKISGISPSQEDCEATFRHCDLDDSGDLDVDEMT 172
Query: 146 Q 146
+
Sbjct: 173 R 173
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 53/125 (42%), Gaps = 19/125 (15%)
Query: 50 LYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLF----ADRVFDLFDTKHNGILDFE 105
L+ +F+++ G+I+ E Q AL +N + F + +FD ++ ++F
Sbjct: 27 LWNVFQRVDKD--RSGVISDTELQQAL--SNGTWTPFNPVTVRSIISMFDRENKAGVNFS 82
Query: 106 EFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIE 165
EF + F+ YD G I++ E+KQ L+ G LSD +
Sbjct: 83 EFTGVWKYITDWQNV-------FRTYDRDNSGMIDKNELKQ----ALSGFGYRLSDQFHD 131
Query: 166 SIIDK 170
+I K
Sbjct: 132 ILIRK 136
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 53/125 (42%), Gaps = 19/125 (15%)
Query: 50 LYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLF----ADRVFDLFDTKHNGILDFE 105
L+ +F+++ G+I+ E Q AL +N + F + +FD ++ ++F
Sbjct: 5 LWNVFQRVDKDR--SGVISDTELQQAL--SNGTWTPFNPVTVRSIISMFDRENKAGVNFS 60
Query: 106 EFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIE 165
EF + F+ YD G I++ E+KQ L+ G LSD +
Sbjct: 61 EFTGVWKYITDWQNV-------FRTYDRDNSGMIDKNELKQ----ALSGFGYRLSDQFHD 109
Query: 166 SIIDK 170
+I K
Sbjct: 110 ILIRK 114
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 89 RVFDLFDTKHNGILDFEEF-ARALSIFHPNSPIDDKIEFS--FQLYDLKQQGFIERQEVK 145
+ D D +G +DF+EF + +S + E S F+++D G+I+ +E+K
Sbjct: 59 EMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELK 118
Query: 146 QMVVATLTESGMNLSDDVIESII 168
M+ AT G +++D IE ++
Sbjct: 119 IMLQAT----GETITEDDIEELM 137
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 53/125 (42%), Gaps = 19/125 (15%)
Query: 50 LYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLF----ADRVFDLFDTKHNGILDFE 105
L+ +F+++ G+I+ E Q AL +N + F + +FD ++ ++F
Sbjct: 6 LWNVFQRVDKDR--SGVISDTELQQAL--SNGTWTPFNPVTVRSIISMFDRENKAGVNFS 61
Query: 106 EFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSDDVIE 165
EF + F+ YD G I++ E+KQ L+ G LSD +
Sbjct: 62 EFTGVWKYITDWQNV-------FRTYDRDNSGMIDKNELKQ----ALSGFGYRLSDQFHD 110
Query: 166 SIIDK 170
+I K
Sbjct: 111 ILIRK 115
>pdb|1B7B|A Chain A, Carbamate Kinase From Enterococcus Faecalis
pdb|1B7B|B Chain B, Carbamate Kinase From Enterococcus Faecalis
pdb|1B7B|C Chain C, Carbamate Kinase From Enterococcus Faecalis
pdb|1B7B|D Chain D, Carbamate Kinase From Enterococcus Faecalis
pdb|2WE4|A Chain A, Carbamate Kinase From Enterococcus Faecalis Bound To A
Sulfate Ion And Two Water Molecules, Which Mimic The
Substrate Carbamyl Phosphate
pdb|2WE4|B Chain B, Carbamate Kinase From Enterococcus Faecalis Bound To A
Sulfate Ion And Two Water Molecules, Which Mimic The
Substrate Carbamyl Phosphate
pdb|2WE4|C Chain C, Carbamate Kinase From Enterococcus Faecalis Bound To A
Sulfate Ion And Two Water Molecules, Which Mimic The
Substrate Carbamyl Phosphate
pdb|2WE4|D Chain D, Carbamate Kinase From Enterococcus Faecalis Bound To A
Sulfate Ion And Two Water Molecules, Which Mimic The
Substrate Carbamyl Phosphate
pdb|2WE5|A Chain A, Carbamate Kinase From Enterococcus Faecalis Bound To Mgadp
pdb|2WE5|B Chain B, Carbamate Kinase From Enterococcus Faecalis Bound To Mgadp
pdb|2WE5|C Chain C, Carbamate Kinase From Enterococcus Faecalis Bound To Mgadp
Length = 310
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 101 ILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLS 160
+ + EE+ +A F P S + KIE + Q F+E Q KQ ++ +L G
Sbjct: 251 VAELEEYKQA-GHFAPGSMLP-KIEAAIQ--------FVESQPNKQAIITSLENLGSMSG 300
Query: 161 DDVIESIIDK 170
D+++ +++ K
Sbjct: 301 DEIVGTVVTK 310
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 13/110 (11%)
Query: 48 EALYELFKKIS---------SAVIDDGLINKEEFQLALFKTNKKESL--FADRVFDLFDT 96
EA+ FKKI A ++ G + L L+ NKK + + + VFD+FD
Sbjct: 69 EAVEAFFKKIGLDYGKEVEFPAFVN-GWKELAKHDLKLWSQNKKSLIRNWGEAVFDIFDK 127
Query: 97 KHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQ 146
+G + +E+ + P D+ E +F+ DL G ++ E+ +
Sbjct: 128 DGSGSISLDEW-KTYGGISGICPSDEDAEKTFKHCDLDNSGKLDVDEMTR 176
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 90 VFDLFDTKHNGILDFEEF-ARALSIFHPNSPIDDKIEFS--FQLYDLKQQGFIERQEVKQ 146
+ D D +G +DF+EF + +S + E S F+++D G+I+ +E+K
Sbjct: 60 MIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKI 119
Query: 147 MVVATLTESGMNLSDDVIESII 168
M+ AT G +++D IE ++
Sbjct: 120 MLQAT----GETITEDDIEELM 137
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 97 KHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESG 156
K G D++ F + + D +++ F++ D Q GFIE +E+K V+ + G
Sbjct: 19 KDPGTFDYKRFFHLVGL---KGKTDAQVKEVFEILDKDQSGFIEEEELKG-VLKGFSAHG 74
Query: 157 MNLSDDVIESII 168
+L+D ++++
Sbjct: 75 RDLNDTETKALL 86
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 90 VFDLFDTKHNGILDFEEF-ARALSIFHPNSPIDDKIEFS--FQLYDLKQQGFIERQEVKQ 146
+ D D +G +DF+EF + +S + E S F+++D G+I+ E+K
Sbjct: 60 MIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMWDKNADGYIDLDELKI 119
Query: 147 MVVATLTESGMNLSDDVIESII 168
M+ AT G +++D IE ++
Sbjct: 120 MLQAT----GETITEDDIEELM 137
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 90 VFDLFDTKHNGILDFEEF-ARALSIFHPNSPIDDKIEFS--FQLYDLKQQGFIERQEVKQ 146
+ D D +G +DF+EF + +S + E S F+++D G+I+ +E+K
Sbjct: 60 MIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKI 119
Query: 147 MVVATLTESGMNLSDDVIESII 168
M+ AT G +++D IE ++
Sbjct: 120 MLQAT----GETITEDDIEELM 137
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 51/97 (52%), Gaps = 11/97 (11%)
Query: 76 LFKTNKKESLFADRVFDLFDTKHNGILDFEEF----ARALSIFHPNSPIDDKIEFSFQLY 131
L + KE L D + + D +G +DFEEF R + ++++E F+++
Sbjct: 49 LGQNPTKEEL--DAIIEEVDEDGSGTIDFEEFLVMMVRQMKE-DAKGKSEEELEDCFRIF 105
Query: 132 DLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESII 168
D GFI+ +E+ +++ AT G +++++ IE ++
Sbjct: 106 DKNADGFIDIEELGEILRAT----GEHVTEEDIEDLM 138
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 62/127 (48%), Gaps = 16/127 (12%)
Query: 46 EIEALYELFKKISSAVIDDGLINKEEFQLAL----FKTNKKESLFADRVFDLFDTKHNGI 101
EI ++LF S G I+ +E ++A+ F+ K+E ++ D +G
Sbjct: 29 EIREAFDLFDTDGS-----GTIDAKELKVAMRALGFEPKKEE---IKKMISEIDKDGSGT 80
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DFEEF ++ ++I +F+L+D G I ++++++ E G NL++
Sbjct: 81 IDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVA----KELGENLTE 136
Query: 162 DVIESII 168
+ ++ +I
Sbjct: 137 EELQEMI 143
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 8/27 (29%), Positives = 20/27 (74%)
Query: 118 SPIDDKIEFSFQLYDLKQQGFIERQEV 144
+ +K++++F LYD+ + G+I ++E+
Sbjct: 5 GTVHEKLKWAFNLYDINKDGYITKEEM 31
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 28.1 bits (61), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 90 VFDLFDTKHNGILDFEEF-ARALSIFHPNSPIDDKIEFS--FQLYDLKQQGFIERQEVKQ 146
+ D D +G +DF+EF + +S + E S F+++D G+I+ E+K
Sbjct: 60 MIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKI 119
Query: 147 MVVATLTESGMNLSDDVIESII 168
M+ AT G +++D IE ++
Sbjct: 120 MLQAT----GETITEDDIEELM 137
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 28.1 bits (61), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 95 DTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTE 154
+ +NG L+F EF ++ + ++++ +F+++D GFI E++ +++
Sbjct: 56 ENNNNGQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMI----- 110
Query: 155 SGMNLSDDVIESIIDKVL 172
NL + V + ID+++
Sbjct: 111 ---NLGEKVTDEEIDEMI 125
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 28.1 bits (61), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 90 VFDLFDTKHNGILDFEEF-ARALSIFHPNSPIDDKIEFS--FQLYDLKQQGFIERQEVKQ 146
+ D D +G +DF+EF + +S + E S F+++D G+I+ E+K
Sbjct: 60 MIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKI 119
Query: 147 MVVATLTESGMNLSDDVIESII 168
M+ AT G +++D IE ++
Sbjct: 120 MLQAT----GETITEDDIEELM 137
>pdb|3T38|A Chain A, Corynebacterium Glutamicum Thioredoxin-Dependent Arsenate
Reductase Cg_arsc1'
pdb|3T38|B Chain B, Corynebacterium Glutamicum Thioredoxin-Dependent Arsenate
Reductase Cg_arsc1'
Length = 213
Score = 27.7 bits (60), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 11/41 (26%), Positives = 24/41 (58%)
Query: 132 DLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESIIDKVL 172
+++ G + E+ +V+ L+E G+N+SD + + D V+
Sbjct: 111 EVRSAGSLPASEIHPLVLEILSERGVNISDAFPKPLTDDVI 151
>pdb|1NYA|A Chain A, Nmr Solution Structure Of Calerythrin, An Ef-hand Calcium-
Binding Protein
Length = 176
Score = 27.3 bits (59), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Query: 64 DGLINKEEF--QLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFH 115
DG IN +EF L +K E A F+ DT NG L +E A+ FH
Sbjct: 116 DGQINADEFAAWLTALGMSKAE---AAEAFNQVDTNGNGELSLDELLTAVRDFH 166
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 27.3 bits (59), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 13/67 (19%)
Query: 90 VFDLFDTKHNGILDFEEFARALSIF-------------HPNSPIDDKIEFSFQLYDLKQQ 136
+F DT ++G+LD +E R F + S I+D+I+ L D+
Sbjct: 336 IFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGS 395
Query: 137 GFIERQE 143
G IE E
Sbjct: 396 GSIEYSE 402
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 27.3 bits (59), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 25/52 (48%)
Query: 89 RVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIE 140
R F +FD +G++DF+EF + D ++E + + D G I+
Sbjct: 12 RAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVID 63
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 26.9 bits (58), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 87 ADRVFDLFDTKHNGILDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQG 137
A RVF+ FD +G L +EF F P +D ++F F+ D+ G
Sbjct: 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKF-FEEIDVDGNG 52
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 26.9 bits (58), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/127 (18%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Query: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
++E + + LF K DG I ++ + N E+ D + ++ NG
Sbjct: 310 IAEFKEAFSLFDKDG-----DGGITTKQLGTVMRSLGQNPTEAELQDMINEV-GADGNGT 363
Query: 102 LDFEEFARALSIFHPNSPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLTESGMNLSD 161
+DF +F ++ ++ +++I +F+++ G+I +++ + +T G L+D
Sbjct: 364 IDFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHV----MTNLGEKLTD 419
Query: 162 DVIESII 168
+ ++ +I
Sbjct: 420 EEVDEMI 426
>pdb|2PMY|A Chain A, Ef-Hand Domain Of Human Rasef
pdb|2PMY|B Chain B, Ef-Hand Domain Of Human Rasef
Length = 91
Score = 26.9 bits (58), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 65 GLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARAL 111
G + +EEF+ AL + A+ VF D +G + F+EFAR
Sbjct: 42 GRLEREEFR-ALCTELRVRPADAEAVFQRLDADRDGAITFQEFARGF 87
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 26.6 bits (57), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 90 VFDLFDTKHNGILDFEEF-ARALSIFHPNSPIDDKIEFS--FQLYDLKQQGFIERQEVKQ 146
+ D D +G +DF+EF + +S + E S F++ D G+I+ E+K
Sbjct: 60 MIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMXDKNADGYIDLDELKI 119
Query: 147 MVVATLTESGMNLSDDVIESII 168
M+ AT G +++D IE ++
Sbjct: 120 MLQAT----GETITEDDIEELM 137
>pdb|2SCP|A Chain A, Structure Of A Sarcoplasmic Calcium-Binding Protein From
Nereis Diversicolor Refined At 2.0 Angstroms Resolution
pdb|2SCP|B Chain B, Structure Of A Sarcoplasmic Calcium-Binding Protein From
Nereis Diversicolor Refined At 2.0 Angstroms Resolution
pdb|1Q80|A Chain A, Solution Structure And Dynamics Of Nereis Sarcoplasmic
Calcium Binding Protein
Length = 174
Score = 26.2 bits (56), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 63 DDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILDFEEFARALSIFHPN 117
+D I+++E+ + F + A FD DT ++G+L EEF A S F N
Sbjct: 107 EDNNISRDEYGI-FFGMLGLDKTMAPASFDAIDTNNDGLLSLEEFVIAGSDFFMN 160
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 26.2 bits (56), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 50/97 (51%), Gaps = 11/97 (11%)
Query: 76 LFKTNKKESLFADRVFDLFDTKHNGILDFEEF----ARALSIFHPNSPIDDKIEFSFQLY 131
L + KE L D + + D +G +DFEEF R + ++++ F+++
Sbjct: 49 LGQNPTKEEL--DAIIEEVDEDGSGTIDFEEFLVMMVRQMKE-DAKGKSEEELANCFRIF 105
Query: 132 DLKQQGFIERQEVKQMVVATLTESGMNLSDDVIESII 168
D GFI+ +E+ +++ AT G +++++ IE ++
Sbjct: 106 DKNADGFIDIEELGEILRAT----GEHVTEEDIEDLM 138
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.139 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,744,194
Number of Sequences: 62578
Number of extensions: 179060
Number of successful extensions: 794
Number of sequences better than 100.0: 187
Number of HSP's better than 100.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 80
Number of HSP's that attempted gapping in prelim test: 619
Number of HSP's gapped (non-prelim): 204
length of query: 178
length of database: 14,973,337
effective HSP length: 92
effective length of query: 86
effective length of database: 9,216,161
effective search space: 792589846
effective search space used: 792589846
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 48 (23.1 bits)