Query 030407
Match_columns 178
No_of_seqs 212 out of 1497
Neff 8.1
Searched_HMMs 13730
Date Mon Mar 25 21:34:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030407.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/030407hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1nija1 c.37.1.10 (A:2-223) Hy 99.9 4.6E-28 3.4E-32 188.7 2.2 157 2-170 21-195 (222)
2 d2qm8a1 c.37.1.10 (A:5-327) Me 99.9 4.2E-23 3.1E-27 168.6 10.8 170 1-176 68-254 (323)
3 d2p67a1 c.37.1.10 (A:1-327) LA 99.8 2.9E-21 2.1E-25 157.9 10.5 168 2-176 72-256 (327)
4 d1yrba1 c.37.1.10 (A:1-244) AT 99.5 6E-16 4.4E-20 118.8 -0.2 167 2-175 18-239 (244)
5 d1wb1a4 c.37.1.8 (A:1-179) Elo 98.9 5E-10 3.6E-14 82.4 4.9 102 73-176 58-172 (179)
6 d1svia_ c.37.1.8 (A:) Probable 98.9 6.5E-10 4.7E-14 82.4 5.0 81 95-177 106-193 (195)
7 d1moza_ c.37.1.8 (A:) ADP-ribo 98.8 1.1E-08 8.1E-13 74.7 8.6 103 72-177 59-177 (182)
8 d1e0sa_ c.37.1.8 (A:) ADP-ribo 98.8 1E-08 7.3E-13 74.4 7.9 104 72-177 54-172 (173)
9 d1wf3a1 c.37.1.8 (A:3-180) GTP 98.7 4.4E-09 3.2E-13 76.7 5.2 100 73-176 52-168 (178)
10 d1ksha_ c.37.1.8 (A:) ADP-ribo 98.7 1.5E-08 1.1E-12 72.7 7.9 103 71-175 43-160 (165)
11 d1fzqa_ c.37.1.8 (A:) ADP-ribo 98.7 1.5E-08 1.1E-12 73.3 7.7 103 72-176 58-175 (176)
12 d1mkya2 c.37.1.8 (A:173-358) P 98.7 6.8E-09 4.9E-13 75.9 5.7 82 95-176 92-180 (186)
13 d1xzpa2 c.37.1.8 (A:212-371) T 98.7 8.1E-09 5.9E-13 73.5 5.7 98 73-175 47-158 (160)
14 d2gjsa1 c.37.1.8 (A:91-258) Ra 98.7 7.4E-09 5.4E-13 74.9 4.9 100 73-175 47-159 (168)
15 d1kk1a3 c.37.1.8 (A:6-200) Ini 98.7 2E-08 1.4E-12 74.5 6.5 101 74-176 78-192 (195)
16 d3raba_ c.37.1.8 (A:) Rab3a {R 98.6 1.8E-08 1.3E-12 72.8 6.0 101 73-176 53-165 (169)
17 d2erxa1 c.37.1.8 (A:6-176) di- 98.6 9E-09 6.6E-13 74.4 4.3 103 73-177 49-164 (171)
18 d2qn6a3 c.37.1.8 (A:2-206) Ini 98.6 2.8E-08 2.1E-12 74.3 7.1 100 75-176 87-200 (205)
19 d1g7sa4 c.37.1.8 (A:1-227) Ini 98.6 5.1E-09 3.7E-13 79.8 2.7 106 72-177 68-216 (227)
20 d1udxa2 c.37.1.8 (A:157-336) O 98.6 3E-08 2.2E-12 72.2 6.6 101 73-177 48-167 (180)
21 d2f7sa1 c.37.1.8 (A:5-190) Rab 98.6 5.5E-08 4E-12 71.1 8.0 101 73-176 63-176 (186)
22 d1ky3a_ c.37.1.8 (A:) Rab-rela 98.6 6.7E-08 4.9E-12 69.8 8.0 102 74-176 52-169 (175)
23 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 98.6 5.8E-08 4.2E-12 70.9 7.3 101 73-175 50-165 (184)
24 d2ew1a1 c.37.1.8 (A:4-174) Rab 98.6 3E-08 2.2E-12 71.7 5.4 99 73-174 53-163 (171)
25 d1z0fa1 c.37.1.8 (A:8-173) Rab 98.6 2.7E-08 1.9E-12 71.6 5.1 100 73-175 52-163 (166)
26 d1yzqa1 c.37.1.8 (A:14-177) Ra 98.6 2.2E-08 1.6E-12 71.8 4.5 102 73-176 48-160 (164)
27 d1zd9a1 c.37.1.8 (A:18-181) AD 98.6 5.4E-08 4E-12 69.8 6.6 102 73-177 46-163 (164)
28 d1z08a1 c.37.1.8 (A:17-183) Ra 98.6 1.9E-08 1.3E-12 72.5 3.8 101 73-175 51-162 (167)
29 d1z0ja1 c.37.1.8 (A:2-168) Rab 98.5 3.6E-08 2.6E-12 71.0 5.2 100 73-175 52-163 (167)
30 d1mkya1 c.37.1.8 (A:2-172) Pro 98.5 1.3E-08 9.7E-13 73.5 2.6 79 94-176 80-162 (171)
31 d1i2ma_ c.37.1.8 (A:) Ran {Hum 98.5 2.2E-08 1.6E-12 72.6 3.7 100 71-175 49-159 (170)
32 d1z2aa1 c.37.1.8 (A:8-171) Rab 98.5 1.5E-08 1.1E-12 72.8 2.6 101 73-175 50-160 (164)
33 d1x1ra1 c.37.1.8 (A:10-178) Ra 98.5 7.1E-08 5.2E-12 69.7 6.2 101 73-176 51-165 (169)
34 d2g3ya1 c.37.1.8 (A:73-244) GT 98.5 4.5E-08 3.3E-12 71.0 4.8 102 73-176 52-166 (172)
35 d1u8za_ c.37.1.8 (A:) Ras-rela 98.5 2.6E-08 1.9E-12 72.0 3.4 100 73-175 51-163 (168)
36 d2erya1 c.37.1.8 (A:10-180) r- 98.5 5.7E-08 4.1E-12 70.1 4.8 101 73-176 52-165 (171)
37 d1zj6a1 c.37.1.8 (A:2-178) ADP 98.5 1.9E-07 1.4E-11 67.1 7.6 102 73-176 58-174 (177)
38 d2fn4a1 c.37.1.8 (A:24-196) r- 98.5 3.3E-08 2.4E-12 71.7 3.4 101 73-176 53-166 (173)
39 d1xtqa1 c.37.1.8 (A:3-169) GTP 98.5 3.2E-08 2.3E-12 71.2 3.3 100 73-175 51-163 (167)
40 d2atxa1 c.37.1.8 (A:9-193) Rho 98.5 1.3E-07 9.3E-12 69.3 6.6 101 73-175 56-180 (185)
41 d1c1ya_ c.37.1.8 (A:) Rap1A {H 98.4 7.4E-08 5.4E-12 69.2 4.4 102 73-176 50-164 (167)
42 d2g6ba1 c.37.1.8 (A:58-227) Ra 98.4 1.8E-07 1.3E-11 67.4 6.4 100 73-175 55-166 (170)
43 d1kaoa_ c.37.1.8 (A:) Rap2a {H 98.4 4.1E-08 3E-12 70.5 2.7 102 73-176 50-163 (167)
44 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 98.4 7.8E-08 5.7E-12 69.8 3.9 102 73-176 49-174 (177)
45 d1r2qa_ c.37.1.8 (A:) Rab5a {H 98.4 8.8E-08 6.4E-12 69.0 4.2 101 73-176 54-166 (170)
46 d2bmea1 c.37.1.8 (A:6-179) Rab 98.4 1.4E-07 1E-11 68.1 5.2 100 73-175 53-164 (174)
47 d2atva1 c.37.1.8 (A:5-172) Ras 98.4 7.6E-08 5.5E-12 69.4 3.8 100 73-175 49-161 (168)
48 d1x3sa1 c.37.1.8 (A:2-178) Rab 98.4 4.6E-07 3.4E-11 65.6 7.7 99 73-175 55-166 (177)
49 d1ctqa_ c.37.1.8 (A:) cH-p21 R 98.4 2E-07 1.4E-11 66.8 5.3 100 73-175 50-161 (166)
50 d1r8sa_ c.37.1.8 (A:) ADP-ribo 98.4 6.1E-07 4.5E-11 62.8 7.6 103 72-176 42-159 (160)
51 d1wmsa_ c.37.1.8 (A:) Rab9a {H 98.4 7.5E-07 5.5E-11 64.2 8.2 101 73-175 54-169 (174)
52 d2bcgy1 c.37.1.8 (Y:3-196) GTP 98.3 3.2E-07 2.3E-11 67.6 6.0 100 73-175 54-165 (194)
53 d1z06a1 c.37.1.8 (A:32-196) Ra 98.3 2.2E-07 1.6E-11 66.3 4.8 100 73-174 50-165 (165)
54 d1lnza2 c.37.1.8 (A:158-342) O 98.3 1.4E-07 1E-11 68.6 3.8 100 73-176 48-170 (185)
55 d2fu5c1 c.37.1.8 (C:3-175) Rab 98.3 2.3E-07 1.7E-11 67.0 4.9 102 73-176 54-166 (173)
56 d2qtvb1 c.37.1.8 (B:24-189) SA 98.3 2E-06 1.5E-10 59.9 9.8 101 73-175 43-165 (166)
57 d1puia_ c.37.1.8 (A:) Probable 98.3 3.6E-07 2.6E-11 65.7 5.8 58 119-178 127-188 (188)
58 d2a5ja1 c.37.1.8 (A:9-181) Rab 98.3 2.3E-07 1.7E-11 67.0 4.6 101 73-175 51-162 (173)
59 d2f9la1 c.37.1.8 (A:8-182) Rab 98.3 2.6E-07 1.9E-11 66.8 4.9 101 73-175 52-163 (175)
60 d2gj8a1 c.37.1.8 (A:216-376) P 98.3 9.4E-08 6.8E-12 67.9 1.2 73 94-175 80-159 (161)
61 d1u0la2 c.37.1.8 (A:69-293) Pr 98.2 6.2E-07 4.5E-11 68.2 5.3 79 95-175 11-95 (225)
62 d1g16a_ c.37.1.8 (A:) Rab-rela 98.2 7.4E-07 5.4E-11 63.7 5.3 101 73-176 50-161 (166)
63 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 98.2 4.3E-07 3.1E-11 65.2 4.0 101 73-175 51-165 (170)
64 d2ngra_ c.37.1.8 (A:) CDC42 {H 98.2 6.7E-07 4.9E-11 65.5 4.3 101 73-175 50-174 (191)
65 d1d2ea3 c.37.1.8 (A:55-250) El 98.2 9.9E-07 7.2E-11 65.6 5.0 103 73-176 65-192 (196)
66 d1egaa1 c.37.1.8 (A:4-182) GTP 98.1 1.5E-06 1.1E-10 62.3 5.8 104 72-176 51-169 (179)
67 d1mh1a_ c.37.1.8 (A:) Rac {Hum 98.1 6.9E-07 5E-11 65.0 3.7 101 73-175 52-176 (183)
68 d1upta_ c.37.1.8 (A:) ADP-ribo 98.1 3.1E-06 2.2E-10 59.4 6.8 80 95-176 73-164 (169)
69 d2bmja1 c.37.1.8 (A:66-240) Ce 98.1 3E-06 2.2E-10 61.4 6.1 100 73-175 51-163 (175)
70 d2cxxa1 c.37.1.8 (A:2-185) GTP 98.1 1.5E-06 1.1E-10 62.6 4.3 83 94-176 81-180 (184)
71 d1zunb3 c.37.1.8 (B:16-237) Su 98.0 8.3E-07 6.1E-11 67.3 2.7 93 74-166 89-196 (222)
72 d1m7ba_ c.37.1.8 (A:) RhoE (RN 98.0 1.7E-06 1.2E-10 62.8 3.3 104 72-176 48-175 (179)
73 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 98.0 3.5E-06 2.6E-10 60.0 4.9 82 94-177 80-185 (186)
74 d1puja_ c.37.1.8 (A:) Probable 97.9 5.1E-06 3.7E-10 64.5 4.9 78 94-175 15-94 (273)
75 d1xjca_ c.37.1.10 (A:) Molybdo 97.8 2.3E-05 1.7E-09 55.6 6.1 78 1-84 18-104 (165)
76 d2c78a3 c.37.1.8 (A:9-212) Elo 97.7 7.4E-06 5.4E-10 61.0 3.5 91 72-163 65-170 (204)
77 d1t9ha2 c.37.1.8 (A:68-298) Pr 97.6 4.3E-06 3.1E-10 63.7 0.5 78 95-174 11-96 (231)
78 d1r5ba3 c.37.1.8 (A:215-459) E 97.6 8.6E-06 6.3E-10 62.4 1.9 98 73-170 101-224 (245)
79 d2bv3a2 c.37.1.8 (A:7-282) Elo 97.2 0.00034 2.5E-08 54.2 6.4 61 73-133 70-137 (276)
80 d1jnya3 c.37.1.8 (A:4-227) Elo 97.2 0.00013 9.3E-09 54.6 3.7 96 73-168 80-199 (224)
81 d1j8yf2 c.37.1.10 (F:87-297) G 97.1 0.00029 2.1E-08 52.5 5.5 147 2-169 30-195 (211)
82 d1f60a3 c.37.1.8 (A:2-240) Elo 97.1 4.3E-05 3.2E-09 58.1 0.3 94 73-166 83-198 (239)
83 d2dy1a2 c.37.1.8 (A:8-274) Elo 96.8 0.00057 4.1E-08 52.6 4.9 60 73-132 66-132 (267)
84 d1svsa1 c.37.1.8 (A:32-60,A:18 96.7 0.0015 1.1E-07 46.2 6.2 103 73-176 41-190 (195)
85 d2qy9a2 c.37.1.10 (A:285-495) 96.7 0.0013 9.1E-08 48.9 5.6 148 2-169 27-196 (211)
86 d1np6a_ c.37.1.10 (A:) Molybdo 96.5 0.0013 9.2E-08 45.6 4.4 81 2-83 20-106 (170)
87 d1vmaa2 c.37.1.10 (A:82-294) G 96.3 0.0025 1.8E-07 47.3 5.4 148 2-169 29-198 (213)
88 d1okkd2 c.37.1.10 (D:97-303) G 96.1 0.0031 2.3E-07 46.5 4.9 147 2-168 24-192 (207)
89 d2fh5b1 c.37.1.8 (B:63-269) Si 96.0 0.0033 2.4E-07 45.3 4.5 104 72-177 45-207 (207)
90 d2bcjq2 c.37.1.8 (Q:38-66,Q:18 95.8 0.0039 2.9E-07 44.1 3.9 102 73-175 44-192 (200)
91 d1zcba2 c.37.1.8 (A:47-75,A:20 95.5 0.0028 2E-07 45.1 2.2 103 73-175 43-192 (200)
92 d1ls1a2 c.37.1.10 (A:89-295) G 94.5 0.011 7.6E-07 43.5 3.1 146 2-167 28-189 (207)
93 d1tq4a_ c.37.1.8 (A:) Interfer 92.1 0.1 7.5E-06 41.6 5.6 104 72-176 105-237 (400)
94 d1azta2 c.37.1.8 (A:35-65,A:20 90.3 0.06 4.4E-06 39.1 2.2 20 155-174 191-210 (221)
95 d1n0ua2 c.37.1.8 (A:3-343) Elo 89.0 0.042 3.1E-06 43.2 0.4 57 76-132 98-161 (341)
96 d1nrjb_ c.37.1.8 (B:) Signal r 74.6 1.1 8.2E-05 30.8 3.3 62 73-134 45-126 (209)
97 d1h65a_ c.37.1.8 (A:) Chloropl 68.3 4.8 0.00035 29.1 5.8 63 72-134 78-162 (257)
98 d2akab1 c.37.1.8 (B:6-304) Dyn 58.1 4.6 0.00033 29.5 4.0 62 73-134 124-207 (299)
99 d1x74a1 c.123.1.1 (A:2-360) 2- 51.8 1.6 0.00012 33.2 0.3 86 68-159 24-109 (359)
100 d1ni3a1 c.37.1.8 (A:11-306) Yc 48.4 5.5 0.0004 29.4 3.0 42 120-161 215-258 (296)
101 d1jwyb_ c.37.1.8 (B:) Dynamin 40.2 21 0.0015 25.8 5.1 14 121-134 200-213 (306)
102 d2b4aa1 c.23.1.1 (A:2-119) Hyp 27.7 21 0.0015 22.2 2.9 19 63-81 37-55 (118)
103 d2bv3a2 c.37.1.8 (A:7-282) Elo 26.6 80 0.0058 22.7 6.4 76 96-175 70-149 (276)
104 d2a9pa1 c.23.1.1 (A:2-118) DNA 25.3 17 0.0012 22.5 2.0 17 63-80 35-51 (117)
105 d3bofa2 c.1.26.1 (A:1-300) Cob 24.3 12 0.00086 27.4 1.2 23 47-74 270-292 (300)
106 d1g1pa_ g.3.6.1 (A:) Conotoxin 22.9 13 0.00094 17.5 0.7 9 43-51 14-22 (32)
107 d1g3qa_ c.37.1.10 (A:) Cell di 22.9 33 0.0024 23.1 3.4 62 72-134 110-178 (237)
108 d1xhja_ d.52.8.1 (A:) Nitrogen 21.1 12 0.00084 22.8 0.4 31 40-76 40-73 (88)
109 d1wxqa1 c.37.1.8 (A:1-319) GTP 20.2 41 0.003 24.2 3.6 40 120-163 215-254 (319)
No 1
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=99.93 E-value=4.6e-28 Score=188.75 Aligned_cols=157 Identities=19% Similarity=0.264 Sum_probs=110.4
Q ss_pred HHHHHHhhcCCcEEEEEecCC-CchhHHHHHHcCCCCccceeecccCC-CcccccccccccCHhH-HHhhHh-hCCCCEE
Q 030407 2 LALCKFLRDKYSLAAVTNDIF-TKEDGEFLMRNGALPEERIRAVETGG-CPHAAIREDISINLGP-LEELSN-LFKADLL 77 (178)
Q Consensus 2 ~~~~~~~~~~~~vaVI~nd~g-~~iD~~li~~~~~~~~~~~~~l~~Gc-Cc~l~i~~dl~~~l~~-l~~l~~-~~~~d~i 77 (178)
++++++ .+++|+|||+|||| +++|+.++...+. .++++.+|| ||+. ++++...+.. +.++.. ..+||+|
T Consensus 21 ~~lL~~-~~~~riaVI~Ne~g~~~iD~~~~~~~~~----~~~el~~gcicc~~--~~~~~~~l~~~~~~~~~~~~~~d~i 93 (222)
T d1nija1 21 RHILNE-QHGYKIAVIENEFGEVSVDDQLIGDRAT----QIKTLTNGCICCSR--SNELEDALLDLLDNLDKGNIQFDRL 93 (222)
T ss_dssp HHHHHS-CCCCCEEEECSSCCSCCEEEEEECTTSC----EEEEETTSCEEECT--TSCHHHHHHHHHHHHHHTSCCCSEE
T ss_pred HHHHhc-CCCCcEEEEEecccchhhhhhhhccccc----ceEEecCCcceecc--chhHHHHHHHHHHHHhhccCCccee
Confidence 345543 23589999999999 9999998876554 789999999 9985 5555444322 223322 2369999
Q ss_pred EEeCCcchh----hhcccc-------cccceEEEEEeCCCCCCCCcC---CCCCCCceeEEEEecCCCCCchhHhHHHHH
Q 030407 78 LCESGGDNL----AANFSR-------ELADYIIYIIDVSGGDKIPRK---GGPGITQADLLVINKTDLASAIGADLAVME 143 (178)
Q Consensus 78 iiEttG~~~----~~~~~~-------~~ad~~I~VvD~~~~~~~~~~---~~~qi~~adiiviNK~Dl~~~~~~~~~~~~ 143 (178)
+|||||++- ...+.. ...+.+|+|+|+.++...... +..|++.||+||+||+|++++ . ++++
T Consensus 94 iIE~sG~~~p~~l~~~~~~~~~~~~~~~l~~vi~vVDa~~~~~~~~~~~~~~~Qi~~AD~ivlNK~Dl~~~--~--~~~~ 169 (222)
T d1nija1 94 VIECTGMADPGPIIQTFFSHEVLCQRYLLDGVIALVDAVHADEQMNQFTIAQSQVGYADRILLTKTDVAGE--A--EKLH 169 (222)
T ss_dssp EEEEETTCCHHHHHHHHHHSHHHHHHEEEEEEEEEEETTTHHHHHHHCHHHHHHHHTCSEEEEECTTTCSC--T--HHHH
T ss_pred EEeecccchhhHHHHHHHhhhcccccccccchhhhhhhhhhhhhhhhhHHHHHHHHhCCcccccccccccH--H--HHHH
Confidence 999999531 111110 113789999999887644332 335899999999999999876 3 4788
Q ss_pred HHHHhcCCCCCEEEEecccCCCHHHHH
Q 030407 144 RDALRMRDGGPFIFAQVGWVIGIIFTL 170 (178)
Q Consensus 144 ~~l~~~np~a~i~~~SA~~g~gi~el~ 170 (178)
+.++++||.++|+.+| .-...++.|+
T Consensus 170 ~~l~~lNP~a~Ii~~~-~g~v~~~~ll 195 (222)
T d1nija1 170 ERLARINARAPVYTVT-HGDIDLGLLF 195 (222)
T ss_dssp HHHHHHCSSSCEEECC-SSCCCGGGGS
T ss_pred HHHHHHhCCCeEEEee-CCccCHHHhh
Confidence 8999999999999877 2234555443
No 2
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=99.88 E-value=4.2e-23 Score=168.62 Aligned_cols=170 Identities=15% Similarity=0.111 Sum_probs=111.4
Q ss_pred CHHHHHHhhc-CCcEEEEEecCCCchhHHHHHHcCCCCccceeecccCC-Cc--cccccccc---ccCHhHHHhhHhhCC
Q 030407 1 MLALCKFLRD-KYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGG-CP--HAAIREDI---SINLGPLEELSNLFK 73 (178)
Q Consensus 1 ~~~~~~~~~~-~~~vaVI~nd~g~~iD~~li~~~~~~~~~~~~~l~~Gc-Cc--~l~i~~dl---~~~l~~l~~l~~~~~ 73 (178)
++++++++.+ ++|+|||.||+++++++..+-.... .+.++..++ || +..-|+.+ .........+.+..+
T Consensus 68 i~~l~~~~~~~g~~vaViavDpss~~~gg~llgdr~----rm~~~~~~~~~~ir~~~~~~~~gg~~~~~~~~i~~~~~~g 143 (323)
T d2qm8a1 68 IDALGSLLTAAGHKVAVLAVDPSSTRTGGSILGDKT----RMARLAIDRNAFIRPSPSSGTLGGVAAKTRETMLLCEAAG 143 (323)
T ss_dssp HHHHHHHHHHTTCCEEEEEECGGGGSSCCCSSCCGG----GSTTGGGCTTEEEECCCCCSSHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhhcCCceeeeecccccHHHHhccccchh----hHHHHhcccceeeccccccccccchhHHHHHHHHhhccCC
Confidence 3578887765 5999999999997664322211111 334444333 22 11111221 111223334555679
Q ss_pred CCEEEEeCCcchhhhcccccccceEEEEEeCCCCCCCCcCCCCCCCceeEEEEecCCCCCchhHhHH-HH----HHHHHh
Q 030407 74 ADLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLASAIGADLA-VM----ERDALR 148 (178)
Q Consensus 74 ~d~iiiEttG~~~~~~~~~~~ad~~I~VvD~~~~~~~~~~~~~qi~~adiiviNK~Dl~~~~~~~~~-~~----~~~l~~ 148 (178)
||+|||||+|+++...+....+|..++|+.+..|++.+..++.+++.||++|+||+|+.+. .... .+ ...++.
T Consensus 144 ~d~iiiETVG~gq~e~~~~~~~D~~v~v~~p~~GD~iQ~~k~gilE~aDi~vvNKaD~~~~--~~~~~~~~~~~~~~l~~ 221 (323)
T d2qm8a1 144 FDVILVETVGVGQSETAVADLTDFFLVLMLPGAGDELQGIKKGIFELADMIAVNKADDGDG--ERRASAAASEYRAALHI 221 (323)
T ss_dssp CCEEEEEECSSSSCHHHHHTTSSEEEEEECSCC------CCTTHHHHCSEEEEECCSTTCC--HHHHHHHHHHHHHHHTT
T ss_pred CCeEEEeehhhhhhhhhhhcccceEEEEeeccchhhhhhhhhhHhhhhheeeEeccccccc--hHHHHHHHHHHHHHhhc
Confidence 9999999999877777776778999999999999999999999999999999999999876 3322 12 222222
Q ss_pred cC-----CCCCEEEEecccCCCHHHHHHHHhhh
Q 030407 149 MR-----DGGPFIFAQVGWVIGIIFTLSITHYI 176 (178)
Q Consensus 149 ~n-----p~a~i~~~SA~~g~gi~el~~~l~~~ 176 (178)
.. +..|++.+||++|+|+++|++++.+.
T Consensus 222 ~~~~~~~~~p~V~~~Sa~~g~Gi~el~~~I~~~ 254 (323)
T d2qm8a1 222 LTPPSATWTPPVVTISGLHGKGLDSLWSRIEDH 254 (323)
T ss_dssp BCCSBTTBCCCEEEEBTTTTBSHHHHHHHHHHH
T ss_pred ccccccCCCCceEEEEecCCCCHHHHHHHHHHH
Confidence 22 44699999999999999999998764
No 3
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=99.84 E-value=2.9e-21 Score=157.85 Aligned_cols=168 Identities=20% Similarity=0.136 Sum_probs=105.6
Q ss_pred HHHHHHhhc-CCcEEEEEecCCCchhH-------HHHHHcCCCCccceeecccCCCcccccccccccCHhHHHhhHhhCC
Q 030407 2 LALCKFLRD-KYSLAAVTNDIFTKEDG-------EFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFK 73 (178)
Q Consensus 2 ~~~~~~~~~-~~~vaVI~nd~g~~iD~-------~li~~~~~~~~~~~~~l~~GcCc~l~i~~dl~~~l~~l~~l~~~~~ 73 (178)
+++++++.+ ++||||+.+|++++.++ .+|...+..+...++++.++| ++ +.+.........+.+..+
T Consensus 72 ~~l~~~~~~~g~~vavlavDpss~~~ggailgdr~rm~~~~~~~~~~ir~~~~~g--~l---gg~~~~~~~~~~~~~~~g 146 (327)
T d2p67a1 72 EAFGMLLIREGLKVAVIAVDPSSPVTGGSILGDKTRMNDLARAEAAFIRPVPSSG--HL---GGASQRARELMLLCEAAG 146 (327)
T ss_dssp HHHHHHHHHTTCCEEEEEECCC---------------CTTTTCTTEEEEEECC----------CHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCceeeecCCCceeeeccccccchhHHHHhccccccccccccccc--cc---ccchhhhhHHHHHHHhcC
Confidence 567777766 49999999999976643 333322222223444444333 21 011222233345556779
Q ss_pred CCEEEEeCCcchhhhcccccccceEEEEEeCCCCCCCCcCCCCCCCceeEEEEecCCCCCchhHhHH----HHHHHHHhc
Q 030407 74 ADLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLASAIGADLA----VMERDALRM 149 (178)
Q Consensus 74 ~d~iiiEttG~~~~~~~~~~~ad~~I~VvD~~~~~~~~~~~~~qi~~adiiviNK~Dl~~~~~~~~~----~~~~~l~~~ 149 (178)
+|+|||||+|+.+........+|.+++|+++..|++.+..+...++.||++|+||+|+... .... .+...++..
T Consensus 147 ~d~iliEtvG~gq~e~~i~~~aD~~l~v~~P~~Gd~iq~~k~gi~e~aDi~VvNKaD~~~~--~~~~~~~~~~~~al~~~ 224 (327)
T d2p67a1 147 YDVVIVETVGVGQSETEVARMVDCFISLQIAGGGDDLQGIKKGLMEVADLIVINKDDGDNH--TNVAIARHMYESALHIL 224 (327)
T ss_dssp CSEEEEEEECCTTHHHHHHTTCSEEEEEECC------CCCCHHHHHHCSEEEECCCCTTCH--HHHHHHHHHHHHHHHHS
T ss_pred CCeEEEeeccccccchhhhhccceEEEEecCCCchhhhhhchhhhccccEEEEEeecccch--HHHHHHHHHHHHHhhhc
Confidence 9999999999777666555578999999999999988877777889999999999999876 3322 233333322
Q ss_pred C-----CCCCEEEEecccCCCHHHHHHHHhhh
Q 030407 150 R-----DGGPFIFAQVGWVIGIIFTLSITHYI 176 (178)
Q Consensus 150 n-----p~a~i~~~SA~~g~gi~el~~~l~~~ 176 (178)
. +..||+.|||++|+||++|++.|.++
T Consensus 225 ~~~~~~w~p~V~~~SA~~g~Gi~eL~~~I~~~ 256 (327)
T d2p67a1 225 RRKYDEWQPRVLTCSALEKRGIDEIWHAIIDF 256 (327)
T ss_dssp CCSBTTBCCEEEECBGGGTBSHHHHHHHHHHH
T ss_pred ccCCCCCcceeEEEEeeCCCCHHHHHHHHHHH
Confidence 2 23589999999999999999998764
No 4
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=99.50 E-value=6e-16 Score=118.84 Aligned_cols=167 Identities=12% Similarity=0.010 Sum_probs=98.2
Q ss_pred HHHHHHhhcCCcEEEEEecCC-C------chhHHHHHHcCCCCccceeecccCC-CcccccccccccCHhHHHhhH--hh
Q 030407 2 LALCKFLRDKYSLAAVTNDIF-T------KEDGEFLMRNGALPEERIRAVETGG-CPHAAIREDISINLGPLEELS--NL 71 (178)
Q Consensus 2 ~~~~~~~~~~~~vaVI~nd~g-~------~iD~~li~~~~~~~~~~~~~l~~Gc-Cc~l~i~~dl~~~l~~l~~l~--~~ 71 (178)
.++++++..++++|+|-+|+| . .+|...+.+..... .......+|| ||+-.+ ...+..+.... ..
T Consensus 18 ~~ll~~~~~~~~~~ivn~d~~~~~~~~~~~id~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 92 (244)
T d1yrba1 18 GEFGRYLEDNYKVAYVNLDTGVKELPYEPSIDVREFVTVEEIM-REGYGPNGAIVESYDRL----MEKFNEYLNKILRLE 92 (244)
T ss_dssp HHHHHHHTTTSCEEEEECCSSCSCCSSCCSEEGGGTCCHHHHH-TTTCCHHHHHHHHHHHH----HTTHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCeEEEEecCcccccCCCcccchHHHHHHHHHHh-HhhhccCCchhhhhHhH----HhhHHHHHHHHHhhc
Confidence 466777766688998887877 3 34544321100000 1224555677 443211 22332222211 12
Q ss_pred CCCCEEEEeCCcchhh-------hccc-ccccceEEEEEeCCCCCCCCcC---------CCCCCCceeEEEEecCCCCCc
Q 030407 72 FKADLLLCESGGDNLA-------ANFS-RELADYIIYIIDVSGGDKIPRK---------GGPGITQADLLVINKTDLASA 134 (178)
Q Consensus 72 ~~~d~iiiEttG~~~~-------~~~~-~~~ad~~I~VvD~~~~~~~~~~---------~~~qi~~adiiviNK~Dl~~~ 134 (178)
..++++++++.|..-. ..+. ....+.+++++|+..+...+.. ...|+..++++++||+|+.++
T Consensus 93 ~~~~~~~id~~g~~~~~~~~~~~~~~~~~~~~~~~v~vvd~~~~~~~~~~~~~~l~~~~~~~~~~~~~ivvinK~D~~~~ 172 (244)
T d1yrba1 93 KENDYVLIDTPGQMETFLFHEFGVRLMENLPYPLVVYISDPEILKKPNDYCFVRFFALLIDLRLGATTIPALNKVDLLSE 172 (244)
T ss_dssp HHCSEEEEECCSSHHHHHHSHHHHHHHHTSSSCEEEEEECGGGCCSHHHHHHHHHHHHHHHHHHTSCEEEEECCGGGCCH
T ss_pred cccceeeeccccchhHHHHHHHHHHHHhhccCceEEEEeccccccCchhHhhHHHHHHHHHHHhCCCceeeeeccccccH
Confidence 3689999999994210 0011 1123678999998776543221 112567899999999999986
Q ss_pred hhHhHHHHHHH----------------------------HHhcCCCCCEEEEecccCCCHHHHHHHHhh
Q 030407 135 IGADLAVMERD----------------------------ALRMRDGGPFIFAQVGWVIGIIFTLSITHY 175 (178)
Q Consensus 135 ~~~~~~~~~~~----------------------------l~~~np~a~i~~~SA~~g~gi~el~~~l~~ 175 (178)
.+.+....+ +++..+..+++++||++|+|+++|++.|.+
T Consensus 173 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vSa~~geGi~~L~~~l~e 239 (244)
T d1yrba1 173 --EEKERHRKYFEDIDYLTARLKLDPSMQGLMAYKMCSMMTEVLPPVRVLYLSAKTREGFEDLETLAYE 239 (244)
T ss_dssp --HHHHHHHHHHHCHHHHHHHHHHCCSHHHHHHHHHHHHHHHHSCCCCCEECCTTTCTTHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhCCCCcEEEEECCCCCCHHHHHHHHHH
Confidence 443332211 122345679999999999999999999876
No 5
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis [TaxId: 39152]}
Probab=98.91 E-value=5e-10 Score=82.37 Aligned_cols=102 Identities=16% Similarity=0.122 Sum_probs=64.3
Q ss_pred CCCEEEEeCCcch-h-hhc-ccccccceEEEEEeCCCCCCCCcC----CCCCCCceeEEEEecCCCCCchhHhHHHHHHH
Q 030407 73 KADLLLCESGGDN-L-AAN-FSRELADYIIYIIDVSGGDKIPRK----GGPGITQADLLVINKTDLASAIGADLAVMERD 145 (178)
Q Consensus 73 ~~d~iiiEttG~~-~-~~~-~~~~~ad~~I~VvD~~~~~~~~~~----~~~qi~~adiiviNK~Dl~~~~~~~~~~~~~~ 145 (178)
++.+.++.+.|.. . ... .....+|.+++++|+..+...+.. .......+-++|+||+|+++. ++.+.....
T Consensus 58 ~~~~~~~d~~g~~~~~~~~~~~l~~~d~~ilv~d~~~g~~~~~~~~~~~~~~~~~p~iiv~NKiD~~~~--~~~~~~~~~ 135 (179)
T d1wb1a4 58 NYRITLVDAPGHADLIRAVVSAADIIDLALIVVDAKEGPKTQTGEHMLILDHFNIPIIVVITKSDNAGT--EEIKRTEMI 135 (179)
T ss_dssp TEEEEECCCSSHHHHHHHHHHHTTSCCEEEEEEETTTCSCHHHHHHHHHHHHTTCCBCEEEECTTSSCH--HHHHHHHHH
T ss_pred CccccccccccccccccchhhhhhhccccccccccccccchhhhhhhhhhhhcCCcceeccccccccCH--HHHHHHHHH
Confidence 3456666777721 0 011 111246999999999887543211 011134567999999999987 544333322
Q ss_pred HHh----c--CCCCCEEEEecccCCCHHHHHHHHhhh
Q 030407 146 ALR----M--RDGGPFIFAQVGWVIGIIFTLSITHYI 176 (178)
Q Consensus 146 l~~----~--np~a~i~~~SA~~g~gi~el~~~l~~~ 176 (178)
.+. . .+..+++++||++|+|+++|++.|.+.
T Consensus 136 ~~~~~~~~~~~~~~~iv~iSA~~g~gi~eL~~~I~~~ 172 (179)
T d1wb1a4 136 MKSILQSTHNLKNSSIIPISAKTGFGVDELKNLIITT 172 (179)
T ss_dssp HHHHHHHSSSGGGCCEEECCTTTCTTHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCCCeEEEEEccCCcCHHHHHHHHHhc
Confidence 222 1 134699999999999999999988654
No 6
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=98.89 E-value=6.5e-10 Score=82.37 Aligned_cols=81 Identities=7% Similarity=-0.024 Sum_probs=58.0
Q ss_pred cceEEEEEeCCCCCCCCcC----CCCCCCceeEEEEecCCCCCchhHhHHHHHHHHHh---cCCCCCEEEEecccCCCHH
Q 030407 95 ADYIIYIIDVSGGDKIPRK----GGPGITQADLLVINKTDLASAIGADLAVMERDALR---MRDGGPFIFAQVGWVIGII 167 (178)
Q Consensus 95 ad~~I~VvD~~~~~~~~~~----~~~qi~~adiiviNK~Dl~~~~~~~~~~~~~~l~~---~np~a~i~~~SA~~g~gi~ 167 (178)
++.+++++|+.++...... +......+-++|+||+|+.++ .+.+...+.+++ .++..+++++||++|+|++
T Consensus 106 ~~~vi~viD~~~~~~~~~~~~~~~l~~~~~piivv~NK~D~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~SA~~~~gi~ 183 (195)
T d1svia_ 106 LKAVVQIVDLRHAPSNDDVQMYEFLKYYGIPVIVIATKADKIPK--GKWDKHAKVVRQTLNIDPEDELILFSSETKKGKD 183 (195)
T ss_dssp EEEEEEEEETTSCCCHHHHHHHHHHHHTTCCEEEEEECGGGSCG--GGHHHHHHHHHHHHTCCTTSEEEECCTTTCTTHH
T ss_pred hhhhhhhhhccccccccccccccccccccCcceechhhccccCH--HHHHHHHHHHHHHhcccCCCCEEEEeCCCCCCHH
Confidence 4789999999876432210 111234467999999999876 555554444432 3577899999999999999
Q ss_pred HHHHHHhhhh
Q 030407 168 FTLSITHYIV 177 (178)
Q Consensus 168 el~~~l~~~~ 177 (178)
+|+++|.+..
T Consensus 184 el~~~i~~~l 193 (195)
T d1svia_ 184 EAWGAIKKMI 193 (195)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999998765
No 7
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Probab=98.78 E-value=1.1e-08 Score=74.68 Aligned_cols=103 Identities=15% Similarity=0.147 Sum_probs=64.8
Q ss_pred CCCCEEEEeCCcchh----hhcccccccceEEEEEeCCCCCCCCc---------CCCCCCCceeEEEEecCCCCCchhHh
Q 030407 72 FKADLLLCESGGDNL----AANFSRELADYIIYIIDVSGGDKIPR---------KGGPGITQADLLVINKTDLASAIGAD 138 (178)
Q Consensus 72 ~~~d~iiiEttG~~~----~~~~~~~~ad~~I~VvD~~~~~~~~~---------~~~~qi~~adiiviNK~Dl~~~~~~~ 138 (178)
.+..+.++++.|..- ...+. ..++.+++++|.++...... .....-..+-+|+.||+|+.+. ..
T Consensus 59 ~~~~~~i~D~~g~~~~~~~~~~~~-~~~~~ii~v~d~~d~~s~~~~~~~l~~~~~~~~~~~~piliv~NK~Dl~~~--~~ 135 (182)
T d1moza_ 59 KNLKLNVWDLGGQTSIRPYWRCYY-ADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLVFANKQDQPGA--LS 135 (182)
T ss_dssp TTEEEEEEEEC----CCTTGGGTT-TTEEEEEEEEETTCTTTHHHHHHHHHHHTTSSTTSSCEEEEEEECTTSTTC--CC
T ss_pred CCEEEEEEecccccccchhHHhhh-ccceeEEEEeeecccccchhHHHHHHHHHHhhccCCcceEEEEEeeccccc--cC
Confidence 356788899999421 11222 25799999999987643211 0111123467889999999765 34
Q ss_pred HHHHHHHHH--hcC-CCCCEEEEecccCCCHHHHHHHHhhhh
Q 030407 139 LAVMERDAL--RMR-DGGPFIFAQVGWVIGIIFTLSITHYIV 177 (178)
Q Consensus 139 ~~~~~~~l~--~~n-p~a~i~~~SA~~g~gi~el~~~l~~~~ 177 (178)
.+++.+.+. ... ...+++++||++|+|+++++++|.+.+
T Consensus 136 ~~~i~~~~~~~~~~~~~~~~~e~SA~~g~gv~e~~~~l~~~i 177 (182)
T d1moza_ 136 ASEVSKELNLVELKDRSWSIVASSAIKGEGITEGLDWLIDVI 177 (182)
T ss_dssp HHHHHHHTTTTTCCSSCEEEEEEBGGGTBTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCEEEEEECCCCCCHHHHHHHHHHHH
Confidence 444444432 112 235799999999999999999887653
No 8
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]}
Probab=98.77 E-value=1e-08 Score=74.41 Aligned_cols=104 Identities=15% Similarity=0.106 Sum_probs=67.3
Q ss_pred CCCCEEEEeCCcchhhhc---ccccccceEEEEEeCCCCCCCCc---------CCCCCCCceeEEEEecCCCCCchhHhH
Q 030407 72 FKADLLLCESGGDNLAAN---FSRELADYIIYIIDVSGGDKIPR---------KGGPGITQADLLVINKTDLASAIGADL 139 (178)
Q Consensus 72 ~~~d~iiiEttG~~~~~~---~~~~~ad~~I~VvD~~~~~~~~~---------~~~~qi~~adiiviNK~Dl~~~~~~~~ 139 (178)
..+.+.++++.|..-... .....++.+++|+|++....... .....-..+-++++||+|+.++ ...
T Consensus 54 ~~~~~~i~D~~g~~~~~~~~~~~~~~~~~ii~v~D~s~~~~~~~~~~~l~~~~~~~~~~~~piiiv~NK~Dl~~~--~~~ 131 (173)
T d1e0sa_ 54 KNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDA--MKP 131 (173)
T ss_dssp TTEEEEEEEESCCGGGHHHHGGGTTTCCEEEEEEETTCGGGHHHHHHHHHHHHTSGGGTTCEEEEEEECTTSTTC--CCH
T ss_pred cceeeEEecCCCcchhhhHHHhhhcccceEEEEEecccchhHHHHHHHHHHHhhhcccccceeeeeeeccccccc--ccH
Confidence 357888999999432111 11235799999999976543211 0111123567999999999765 333
Q ss_pred HHHHHHH--HhcC-CCCCEEEEecccCCCHHHHHHHHhhhh
Q 030407 140 AVMERDA--LRMR-DGGPFIFAQVGWVIGIIFTLSITHYIV 177 (178)
Q Consensus 140 ~~~~~~l--~~~n-p~a~i~~~SA~~g~gi~el~~~l~~~~ 177 (178)
..+...+ .... ...+++++||++|+||+|+|++|.+.+
T Consensus 132 ~~i~~~~~~~~~~~~~~~~~e~SA~tg~gv~e~~~~l~~~~ 172 (173)
T d1e0sa_ 132 HEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLTSNY 172 (173)
T ss_dssp HHHHHHTTGGGCCSSCEEEEECBTTTTBTHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhCCCEEEEeeCCCCcCHHHHHHHHHHhc
Confidence 4444433 2222 234789999999999999999998754
No 9
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=98.74 E-value=4.4e-09 Score=76.70 Aligned_cols=100 Identities=10% Similarity=0.002 Sum_probs=68.1
Q ss_pred CCCEEEEeCCcchhh---------hcc--cccccceEEEEEeCCCCCCCCcC-CC----CC-CCceeEEEEecCCCCCch
Q 030407 73 KADLLLCESGGDNLA---------ANF--SRELADYIIYIIDVSGGDKIPRK-GG----PG-ITQADLLVINKTDLASAI 135 (178)
Q Consensus 73 ~~d~iiiEttG~~~~---------~~~--~~~~ad~~I~VvD~~~~~~~~~~-~~----~q-i~~adiiviNK~Dl~~~~ 135 (178)
+..+.++.|.|.... ... ....+|.+++|+|++++...... .. .. -..+-++|+||+|+.+.
T Consensus 52 ~~~~~~~DtpG~~~~~~~~~~~~~~~~~~~~~~ad~il~v~D~~~~~~~~~~~i~~~l~~~~~~~piilv~NK~Dl~~~- 130 (178)
T d1wf3a1 52 RRQIVFVDTPGLHKPMDALGEFMDQEVYEALADVNAVVWVVDLRHPPTPEDELVARALKPLVGKVPILLVGNKLDAAKY- 130 (178)
T ss_dssp TEEEEEEECCCCCCCCSHHHHHHHHHHHHHTSSCSEEEEEEETTSCCCHHHHHHHHHHGGGTTTSCEEEEEECGGGCSS-
T ss_pred eeeeeecccccccccccccchhcccccccccccccceeeeechhhhhcccccchhhheeccccchhhhhhhcccccccC-
Confidence 567899999994110 000 11247999999999876432211 00 00 13356999999999876
Q ss_pred hHhHHHHHHHHHhcCCCCCEEEEecccCCCHHHHHHHHhhh
Q 030407 136 GADLAVMERDALRMRDGGPFIFAQVGWVIGIIFTLSITHYI 176 (178)
Q Consensus 136 ~~~~~~~~~~l~~~np~a~i~~~SA~~g~gi~el~~~l~~~ 176 (178)
.+ ...+.+++..+..+++++||++|+|+++|++.|.+.
T Consensus 131 -~~--~~~~~~~~~~~~~~~~~iSA~~~~gi~~L~~~i~~~ 168 (178)
T d1wf3a1 131 -PE--EAMKAYHELLPEAEPRMLSALDERQVAELKADLLAL 168 (178)
T ss_dssp -HH--HHHHHHHHTSTTSEEEECCTTCHHHHHHHHHHHHTT
T ss_pred -HH--HHHHHHHhhcccCceEEEecCCCCCHHHHHHHHHHh
Confidence 32 334555666778899999999999999999998765
No 10
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]}
Probab=98.73 E-value=1.5e-08 Score=72.66 Aligned_cols=103 Identities=13% Similarity=0.032 Sum_probs=65.2
Q ss_pred hCCCCEEEEeCCcchhh---hcccccccceEEEEEeCCCCCCCCc---------CCCCCCCceeEEEEecCCCCCchhHh
Q 030407 71 LFKADLLLCESGGDNLA---ANFSRELADYIIYIIDVSGGDKIPR---------KGGPGITQADLLVINKTDLASAIGAD 138 (178)
Q Consensus 71 ~~~~d~iiiEttG~~~~---~~~~~~~ad~~I~VvD~~~~~~~~~---------~~~~qi~~adiiviNK~Dl~~~~~~~ 138 (178)
..++.+.++++.|..-- .......++.+++++|+++...... .....-..+-++|.||+|+.+. ..
T Consensus 43 ~~~~~~~~~D~~G~~~~~~~~~~~~~~~~~~i~v~d~~d~~~~~~~~~~~~~~~~~~~~~~~p~iiv~nK~Dl~~~--~~ 120 (165)
T d1ksha_ 43 HRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPGA--LS 120 (165)
T ss_dssp ETTEEEEEEEECCSHHHHTTGGGGCTTCSEEEEEEETTCGGGHHHHHHHHHHHHTCGGGTTCEEEEEEECTTSTTC--CC
T ss_pred ccccceeeeecCcchhhhhHHHhhhhhhhcceeeeecccchhHHHHHHhhhhhhhhcccCCCceEEEEeccccccc--cC
Confidence 34678999999994211 1111224699999999876432211 0011122467899999999865 34
Q ss_pred HHHHHHHHH--hc-CCCCCEEEEecccCCCHHHHHHHHhh
Q 030407 139 LAVMERDAL--RM-RDGGPFIFAQVGWVIGIIFTLSITHY 175 (178)
Q Consensus 139 ~~~~~~~l~--~~-np~a~i~~~SA~~g~gi~el~~~l~~ 175 (178)
.+.....+. .+ ....+++++||++|+|+++++++|.+
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~Sa~~g~gv~e~~~~l~~ 160 (165)
T d1ksha_ 121 CNAIQEALELDSIRSHHWRIQGCSAVTGEDLLPGIDWLLD 160 (165)
T ss_dssp HHHHHHHTTGGGCCSSCEEEEECCTTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhhcCCCEEEEEECCCCCCHHHHHHHHHH
Confidence 444443332 11 23457999999999999999998754
No 11
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]}
Probab=98.72 E-value=1.5e-08 Score=73.29 Aligned_cols=103 Identities=17% Similarity=0.045 Sum_probs=66.3
Q ss_pred CCCCEEEEeCCcchhh---hcccccccceEEEEEeCCCCCCCCc---------CCCCCCCceeEEEEecCCCCCchhHhH
Q 030407 72 FKADLLLCESGGDNLA---ANFSRELADYIIYIIDVSGGDKIPR---------KGGPGITQADLLVINKTDLASAIGADL 139 (178)
Q Consensus 72 ~~~d~iiiEttG~~~~---~~~~~~~ad~~I~VvD~~~~~~~~~---------~~~~qi~~adiiviNK~Dl~~~~~~~~ 139 (178)
.++.+.+.++.|..-. .......+|.+++++|+++...... .....-..+-++++||+|+.++ ...
T Consensus 58 ~~~~~~i~d~~g~~~~~~~~~~~~~~~~~ii~v~d~~d~~s~~~~~~~~~~~~~~~~~~~~pillv~nK~Dl~~~--~~~ 135 (176)
T d1fzqa_ 58 QGFKLNVWDIGGQRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQDLLTA--APA 135 (176)
T ss_dssp TTEEEEEEECSSCGGGHHHHHHHHTTCSEEEEEEETTCGGGHHHHHHHHHHHTTCGGGTTCCEEEEEECTTSTTC--CCH
T ss_pred CCeeEeEeeccccccchhHHHHHhhccceeEEeeccccccchhhhhhhhhhhhhhhccCCCeEEEEEEecccccc--ccH
Confidence 3567888888883211 1112235799999999986532211 0001112456889999999876 455
Q ss_pred HHHHHHHHhc---CCCCCEEEEecccCCCHHHHHHHHhhh
Q 030407 140 AVMERDALRM---RDGGPFIFAQVGWVIGIIFTLSITHYI 176 (178)
Q Consensus 140 ~~~~~~l~~~---np~a~i~~~SA~~g~gi~el~~~l~~~ 176 (178)
+.+.+.+... ....+++++||++|+|++|+|++|.+.
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~SA~tg~gv~e~~~~l~~~ 175 (176)
T d1fzqa_ 136 SEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKN 175 (176)
T ss_dssp HHHHHHTTGGGCCSSCEEEEECCTTTCTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhcCCEEEEEeCCCCCCHHHHHHHHHhc
Confidence 5555444311 123579999999999999999998653
No 12
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=98.72 E-value=6.8e-09 Score=75.86 Aligned_cols=82 Identities=18% Similarity=0.139 Sum_probs=58.0
Q ss_pred cceEEEEEeCCCCCCCCcC----CCCCCCceeEEEEecCCCCCchhHhHHHHHHHHHhcC---CCCCEEEEecccCCCHH
Q 030407 95 ADYIIYIIDVSGGDKIPRK----GGPGITQADLLVINKTDLASAIGADLAVMERDALRMR---DGGPFIFAQVGWVIGII 167 (178)
Q Consensus 95 ad~~I~VvD~~~~~~~~~~----~~~qi~~adiiviNK~Dl~~~~~~~~~~~~~~l~~~n---p~a~i~~~SA~~g~gi~ 167 (178)
+|.+++|+|+..+...... .......+.++|+||+|+..........+.+.+++.. +..+++++||++|.|++
T Consensus 92 ~dvii~v~d~~~~~~~~~~~~~~~~~~~~~~~i~v~nK~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vSa~~g~gv~ 171 (186)
T d1mkya2 92 ADVVVIVLDATQGITRQDQRMAGLMERRGRASVVVFNKWDLVVHREKRYDEFTKLFREKLYFIDYSPLIFTSADKGWNID 171 (186)
T ss_dssp CSEEEEEEETTTCCCHHHHHHHHHHHHTTCEEEEEEECGGGSTTGGGCHHHHHHHHHHHCGGGTTSCEEECBTTTTBSHH
T ss_pred CCEEEEeecccccchhhHHHHHHHHHHcCCceeeeccchhhhcchhhhhhhHHHHHHHHhcccCCCeEEEEeCCCCCCHH
Confidence 5899999999876443221 1112345679999999998663233455555555432 46799999999999999
Q ss_pred HHHHHHhhh
Q 030407 168 FTLSITHYI 176 (178)
Q Consensus 168 el~~~l~~~ 176 (178)
+|++.|.+.
T Consensus 172 ~L~~~i~~~ 180 (186)
T d1mkya2 172 RMIDAMNLA 180 (186)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998764
No 13
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima [TaxId: 2336]}
Probab=98.71 E-value=8.1e-09 Score=73.55 Aligned_cols=98 Identities=13% Similarity=0.080 Sum_probs=66.4
Q ss_pred CCCEEEEeCCcchhh-----------hccc-ccccceEEEEEeCCCCCCCCcC--CCCCCCceeEEEEecCCCCCchhHh
Q 030407 73 KADLLLCESGGDNLA-----------ANFS-RELADYIIYIIDVSGGDKIPRK--GGPGITQADLLVINKTDLASAIGAD 138 (178)
Q Consensus 73 ~~d~iiiEttG~~~~-----------~~~~-~~~ad~~I~VvD~~~~~~~~~~--~~~qi~~adiiviNK~Dl~~~~~~~ 138 (178)
+..+.+++|.|.... .... ...+|.+++|+|++++...... ........-++++||+|+.+. ..
T Consensus 47 ~~~~~~~Dt~G~~~~~~~~~~~~~~~~~~~~~~~ad~ii~v~d~~~~~~~~~~~~~~~~~~~~~i~~~~k~d~~~~--~~ 124 (160)
T d1xzpa2 47 GILFRIVDTAGVRSETNDLVERLGIERTLQEIEKADIVLFVLDASSPLDEEDRKILERIKNKRYLVVINKVDVVEK--IN 124 (160)
T ss_dssp TEEEEEEESSCCCSSCCTTCCCCCHHHHHHHHHHCSEEEEEEETTSCCCHHHHHHHHHHTTSSEEEEEEECSSCCC--CC
T ss_pred CeeEEeccccccccCCccHHHHHHHHHHHHHHHhCCEEEEEEeCCCCcchhhhhhhhhcccccceeeeeeccccch--hh
Confidence 566778888884111 0000 1236999999999876532211 001123456899999999987 55
Q ss_pred HHHHHHHHHhcCCCCCEEEEecccCCCHHHHHHHHhh
Q 030407 139 LAVMERDALRMRDGGPFIFAQVGWVIGIIFTLSITHY 175 (178)
Q Consensus 139 ~~~~~~~l~~~np~a~i~~~SA~~g~gi~el~~~l~~ 175 (178)
.+.+.+. +.+..+++++||++|+||++|++.|.+
T Consensus 125 ~~~~~~~---~~~~~~~~~vSA~~g~gi~~L~~~I~k 158 (160)
T d1xzpa2 125 EEEIKNK---LGTDRHMVKISALKGEGLEKLEESIYR 158 (160)
T ss_dssp HHHHHHH---HTCSTTEEEEEGGGTCCHHHHHHHHHH
T ss_pred hHHHHHH---hCCCCcEEEEECCCCCCHHHHHHHHHh
Confidence 5555443 456779999999999999999999865
No 14
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.68 E-value=7.4e-09 Score=74.93 Aligned_cols=100 Identities=14% Similarity=0.121 Sum_probs=63.0
Q ss_pred CCCEEEEeCCcch----hhhcccccccceEEEEEeCCCCCCCCc---------CCCCCCCceeEEEEecCCCCCchhHhH
Q 030407 73 KADLLLCESGGDN----LAANFSRELADYIIYIIDVSGGDKIPR---------KGGPGITQADLLVINKTDLASAIGADL 139 (178)
Q Consensus 73 ~~d~iiiEttG~~----~~~~~~~~~ad~~I~VvD~~~~~~~~~---------~~~~qi~~adiiviNK~Dl~~~~~~~~ 139 (178)
.+.+.++++.|.. +...+. ..+|++++|+|+++...... .....-..+-++|.||+|+.+......
T Consensus 47 ~~~l~i~D~~g~e~~~~~~~~~~-~~~d~~ilv~d~t~~~s~~~~~~~~~~i~~~~~~~~~piilvgnK~Dl~~~~~v~~ 125 (168)
T d2gjsa1 47 EASLMVYDIWEQDGGRWLPGHCM-AMGDAYVIVYSVTDKGSFEKASELRVQLRRARQTDDVPIILVGNKSDLVRSREVSV 125 (168)
T ss_dssp EEEEEEEECC-------CHHHHH-TSCSEEEEEEETTCHHHHHHHHHHHHHHHHHCC--CCCEEEEEECTTCGGGCCSCH
T ss_pred ccceeeeecccccccceecccch-hhhhhhceeccccccccccccccccchhhcccccccceEEEeecccchhhhcchhH
Confidence 5788899999931 112222 25799999999987532211 011112235689999999975411123
Q ss_pred HHHHHHHHhcCCCCCEEEEecccCCCHHHHHHHHhh
Q 030407 140 AVMERDALRMRDGGPFIFAQVGWVIGIIFTLSITHY 175 (178)
Q Consensus 140 ~~~~~~l~~~np~a~i~~~SA~~g~gi~el~~~l~~ 175 (178)
...++..+.. +.+++++||++|.||+++|+.+.+
T Consensus 126 ~~~~~~~~~~--~~~~~e~Sak~~~~v~~~f~~l~~ 159 (168)
T d2gjsa1 126 DEGRACAVVF--DCKFIETSAALHHNVQALFEGVVR 159 (168)
T ss_dssp HHHHHHHHHH--TSEEEECBTTTTBSHHHHHHHHHH
T ss_pred HHHHHHHHhc--CCEEEEEeCCCCcCHHHHHHHHHH
Confidence 3444444544 458999999999999999998754
No 15
>d1kk1a3 c.37.1.8 (A:6-200) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Archaeon Pyrococcus abyssi [TaxId: 29292]}
Probab=98.65 E-value=2e-08 Score=74.54 Aligned_cols=101 Identities=15% Similarity=0.105 Sum_probs=64.2
Q ss_pred CCEEEEeCCcch-hhhcc--cccccceEEEEEeCCCCCCCCc--CC---CCCCCce-eEEEEecCCCCCchhHhH----H
Q 030407 74 ADLLLCESGGDN-LAANF--SRELADYIIYIIDVSGGDKIPR--KG---GPGITQA-DLLVINKTDLASAIGADL----A 140 (178)
Q Consensus 74 ~d~iiiEttG~~-~~~~~--~~~~ad~~I~VvD~~~~~~~~~--~~---~~qi~~a-diiviNK~Dl~~~~~~~~----~ 140 (178)
+-+.||.|.|-. ..... ....+|..+.|+|+..+...+. .+ ...+... -++++||+|+.++ .+. +
T Consensus 78 ~~~~~iDtPGh~~f~~~~~~~~~~~d~~ilvvda~~g~~~~~t~e~~~~~~~~~~~~iiv~inK~D~~d~--~~~~~~~~ 155 (195)
T d1kk1a3 78 RRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDK--EKALENYR 155 (195)
T ss_dssp EEEEEEECSSHHHHHHHHHHCGGGCSEEEEEEETTSCSSCHHHHHHHHHHHHHTCCCEEEEEECGGGSCH--HHHHHHHH
T ss_pred eeEeeeccchhhhhhHHhhcccccccccccccchhhhhhhhhhHHHHHHHHHhcCccceeeeecccchhh--HHHHHHHH
Confidence 347899999921 11111 1124699999999988743211 00 0011223 3678999999976 332 3
Q ss_pred HHHHHHHhcC-CCCCEEEEecccCCCHHHHHHHHhhh
Q 030407 141 VMERDALRMR-DGGPFIFAQVGWVIGIIFTLSITHYI 176 (178)
Q Consensus 141 ~~~~~l~~~n-p~a~i~~~SA~~g~gi~el~~~l~~~ 176 (178)
.+.+.++..+ ..++++++||++|+||++|++.+.+.
T Consensus 156 ~~~~~~~~~~~~~~~iIpiSA~~G~ni~~Ll~~I~~~ 192 (195)
T d1kk1a3 156 QIKEFIEGTVAENAPIIPISALHGANIDVLVKAIEDF 192 (195)
T ss_dssp HHHHHHTTSTTTTCCEEECBTTTTBSHHHHHHHHHHH
T ss_pred HHHHHhccccCCCCeEEEEECCCCCCHHHHHHHHHHH
Confidence 3444444433 34789999999999999999988764
No 16
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.65 E-value=1.8e-08 Score=72.85 Aligned_cols=101 Identities=17% Similarity=0.104 Sum_probs=65.0
Q ss_pred CCCEEEEeCCcch----hhhcccccccceEEEEEeCCCCCCCCc--C------CCCCCCceeEEEEecCCCCCchhHhHH
Q 030407 73 KADLLLCESGGDN----LAANFSRELADYIIYIIDVSGGDKIPR--K------GGPGITQADLLVINKTDLASAIGADLA 140 (178)
Q Consensus 73 ~~d~iiiEttG~~----~~~~~~~~~ad~~I~VvD~~~~~~~~~--~------~~~qi~~adiiviNK~Dl~~~~~~~~~ 140 (178)
...+-+++|.|.. +...+. ..+|++|+|+|.++...... . ....-..+-+++.||+|+........+
T Consensus 53 ~~~l~~wDt~G~e~~~~~~~~~~-~~ad~~ilv~d~~~~~s~~~~~~~~~~~~~~~~~~~~iivv~nK~D~~~~~~v~~~ 131 (169)
T d3raba_ 53 RIKLQIWDTAGQERYRTITTAYY-RGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSE 131 (169)
T ss_dssp EEEEEEEEECCSGGGHHHHHTTT-TTCCEEEEEEETTCHHHHHTHHHHHHHHHHHCCSCCEEEEEEECTTCGGGCCSCHH
T ss_pred eEEEEEEECCCchhhHHHHHHHH-hcCCEEEEEEECccchhhhhhhhhhhhhhcccCCcceEEEEEeecccccccccchh
Confidence 3567789999932 122232 35799999999987532211 0 001123456788899998654212234
Q ss_pred HHHHHHHhcCCCCCEEEEecccCCCHHHHHHHHhhh
Q 030407 141 VMERDALRMRDGGPFIFAQVGWVIGIIFTLSITHYI 176 (178)
Q Consensus 141 ~~~~~l~~~np~a~i~~~SA~~g~gi~el~~~l~~~ 176 (178)
..++..++. +.+++++||++|+||+++|+.+.+.
T Consensus 132 ~~~~~~~~~--~~~~~e~Sak~g~gv~e~f~~l~~~ 165 (169)
T d3raba_ 132 RGRQLADHL--GFEFFEASAKDNINVKQTFERLVDV 165 (169)
T ss_dssp HHHHHHHHH--TCEEEECBTTTTBSHHHHHHHHHHH
T ss_pred hhHHHHHHc--CCEEEEecCCCCcCHHHHHHHHHHH
Confidence 445555554 3689999999999999999987654
No 17
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.64 E-value=9e-09 Score=74.36 Aligned_cols=103 Identities=13% Similarity=0.064 Sum_probs=65.3
Q ss_pred CCCEEEEeCCcchh---hhcccccccceEEEEEeCCCCCCCCc--C--------CCCCCCceeEEEEecCCCCCchhHhH
Q 030407 73 KADLLLCESGGDNL---AANFSRELADYIIYIIDVSGGDKIPR--K--------GGPGITQADLLVINKTDLASAIGADL 139 (178)
Q Consensus 73 ~~d~iiiEttG~~~---~~~~~~~~ad~~I~VvD~~~~~~~~~--~--------~~~qi~~adiiviNK~Dl~~~~~~~~ 139 (178)
.+.+-+.++.|... ........+|++++|+|+++...... . ....-..+-++|.||+|+........
T Consensus 49 ~~~l~~~d~~g~~~~~~~~~~~~~~a~~~ilv~d~~~~~s~~~~~~~~~~~~~~~~~~~~~piilVgnK~Dl~~~~~v~~ 128 (171)
T d2erxa1 49 ICTLQITDTTGSHQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNKCDESPSREVQS 128 (171)
T ss_dssp EEEEEEEECCSCSSCHHHHHHHHHHCSEEEEEEETTCHHHHHTTHHHHHHHHHHHC---CCCEEEEEECGGGGGGCCSCH
T ss_pred cceeccccccccccccccccccccceeEEEEEeecccccchhcccchhhhhhhhhccCCCCcEEEEeecccccccccccH
Confidence 46778889999421 01111234799999999986432211 0 01112235689999999964311223
Q ss_pred HHHHHHHHhcCCCCCEEEEecccCCCHHHHHHHHhhhh
Q 030407 140 AVMERDALRMRDGGPFIFAQVGWVIGIIFTLSITHYIV 177 (178)
Q Consensus 140 ~~~~~~l~~~np~a~i~~~SA~~g~gi~el~~~l~~~~ 177 (178)
++.++..++. +.++++|||++|+||+++|+.|.+++
T Consensus 129 ~e~~~~~~~~--~~~~~e~Sak~~~~v~e~f~~l~~~~ 164 (171)
T d2erxa1 129 SEAEALARTW--KCAFMETSAKLNHNVKELFQELLNLE 164 (171)
T ss_dssp HHHHHHHHHH--TCEEEECBTTTTBSHHHHHHHHHHTC
T ss_pred HHHHHHHHHc--CCeEEEEcCCCCcCHHHHHHHHHHHH
Confidence 4455555554 35899999999999999999887764
No 18
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=98.64 E-value=2.8e-08 Score=74.31 Aligned_cols=100 Identities=16% Similarity=0.092 Sum_probs=62.5
Q ss_pred CEEEEeCCcch-h-hhcc-cccccceEEEEEeCCCCC-CCCcC-C---CCCCCc-eeEEEEecCCCCCchhHhHHH----
Q 030407 75 DLLLCESGGDN-L-AANF-SRELADYIIYIIDVSGGD-KIPRK-G---GPGITQ-ADLLVINKTDLASAIGADLAV---- 141 (178)
Q Consensus 75 d~iiiEttG~~-~-~~~~-~~~~ad~~I~VvD~~~~~-~~~~~-~---~~qi~~-adiiviNK~Dl~~~~~~~~~~---- 141 (178)
.+-+|.|.|-. . ..+. ....+|.+|+|+|+..+. ..+.+ + ...+.. .-+|++||+|+.++ .+...
T Consensus 87 ~~~iiD~PGH~df~~~~~~~~~~ad~ailvVda~~gi~~~~t~e~~~~~~~~~i~~iIV~vNK~Dl~~~--~~~~~~~~~ 164 (205)
T d2qn6a3 87 RISFIDAPGHEVLMATMLSGAALMDGAILVVAANEPFPQPQTREHFVALGIIGVKNLIIVQNKVDVVSK--EEALSQYRQ 164 (205)
T ss_dssp EEEEEECSCHHHHHHHHHHTSSCCSEEEEEEETTSCSSCHHHHHHHHHHHHTTCCCEEEEEECGGGSCH--HHHHHHHHH
T ss_pred EEEEeccchHHHHHhhhhcceeccccccccccccccccchhHHHHHHHHHHcCCceeeeccccCCCccc--hHHHHHHHH
Confidence 36799999921 1 1111 112469999999998874 21110 0 001222 34777999999876 43333
Q ss_pred HHHHHHhcC-CCCCEEEEecccCCCHHHHHHHHhhh
Q 030407 142 MERDALRMR-DGGPFIFAQVGWVIGIIFTLSITHYI 176 (178)
Q Consensus 142 ~~~~l~~~n-p~a~i~~~SA~~g~gi~el~~~l~~~ 176 (178)
..+.++..+ ...+++++||++|.||++|++.+...
T Consensus 165 ~~~~l~~~~~~~~p~ipiSA~~g~nI~~L~e~i~~~ 200 (205)
T d2qn6a3 165 IKQFTKGTWAENVPIIPVSALHKINIDSLIEGIEEY 200 (205)
T ss_dssp HHHHHTTSTTTTCCEEECBTTTTBSHHHHHHHHHHH
T ss_pred HHHHhccccCCCCeEEEEeCCCCCChHHHHHHHHhh
Confidence 333333333 24799999999999999999987654
No 19
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal (G) domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=98.63 E-value=5.1e-09 Score=79.85 Aligned_cols=106 Identities=16% Similarity=0.038 Sum_probs=64.5
Q ss_pred CCCCEEEEeCCcch-hh-hcc-cccccceEEEEEeCCCCCCCCcC----CCCCCCceeEEEEecCCCCCchh--------
Q 030407 72 FKADLLLCESGGDN-LA-ANF-SRELADYIIYIIDVSGGDKIPRK----GGPGITQADLLVINKTDLASAIG-------- 136 (178)
Q Consensus 72 ~~~d~iiiEttG~~-~~-~~~-~~~~ad~~I~VvD~~~~~~~~~~----~~~qi~~adiiviNK~Dl~~~~~-------- 136 (178)
....+.||.|.|-. .. ... ....+|.+|+|+|+.++...+.. .......+-++++||+|+.+...
T Consensus 68 ~~~~~~~iDtPGh~~f~~~~~~~~~~~D~~ilVvda~~g~~~~~~~~~~~~~~~~~p~iivlNK~D~~~~~~~~~~~~~~ 147 (227)
T d1g7sa4 68 TLPGLFFIDTPGHEAFTTLRKRGGALADLAILIVDINEGFKPQTQEALNILRMYRTPFVVAANKIDRIHGWRVHEGRPFM 147 (227)
T ss_dssp TCCEEEEECCCTTSCCTTSBCSSSBSCSEEEEEEETTTCCCHHHHHHHHHHHHTTCCEEEEEECGGGSTTCCCCTTCCHH
T ss_pred cccccccccccceecccccchhcccccceEEEEEecccCcccchhHHHHHhhcCCCeEEEEEECccCCCchhhhhhHHHH
Confidence 35678999999921 11 111 11246999999999887543321 11113456799999999975410
Q ss_pred ------------HhHHHHHHHHHhc----------------CCCCCEEEEecccCCCHHHHHHHHhhhh
Q 030407 137 ------------ADLAVMERDALRM----------------RDGGPFIFAQVGWVIGIIFTLSITHYIV 177 (178)
Q Consensus 137 ------------~~~~~~~~~l~~~----------------np~a~i~~~SA~~g~gi~el~~~l~~~~ 177 (178)
.....+.+....+ ....+++++||++|+|+++|++.|...+
T Consensus 148 ~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~pvSa~~G~gid~Ll~~l~~l~ 216 (227)
T d1g7sa4 148 ETFSKQDIQVQQKLDTKVYELVGKLHEEGFESERFDRVTDFASQVSIIPISAITGEGIPELLTMLMGLA 216 (227)
T ss_dssp HHHTTSCHHHHHHHHHHHHHHHHHHHHTTCEEEEGGGCSCTTTEEEEEECCTTTCTTHHHHHHHHHHHH
T ss_pred HhhhcchHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccccccCCCeEEEeeCCCCCCHHHHHHHHHHHH
Confidence 0001111111111 1125799999999999999999886653
No 20
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]}
Probab=98.62 E-value=3e-08 Score=72.19 Aligned_cols=101 Identities=17% Similarity=0.190 Sum_probs=68.1
Q ss_pred CCCEEEEeCCcchhhhc--------cc--ccccceEEEEEeCCCCCCCCc----C-----CCCCCCceeEEEEecCCCCC
Q 030407 73 KADLLLCESGGDNLAAN--------FS--RELADYIIYIIDVSGGDKIPR----K-----GGPGITQADLLVINKTDLAS 133 (178)
Q Consensus 73 ~~d~iiiEttG~~~~~~--------~~--~~~ad~~I~VvD~~~~~~~~~----~-----~~~qi~~adiiviNK~Dl~~ 133 (178)
+..+.++.|.|..-... +. ...++.++.++|......... . .......+-++|+||+|+.+
T Consensus 48 ~~~~~~~DtpG~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~iiv~NK~D~~~ 127 (180)
T d1udxa2 48 EERFTLADIPGIIEGASEGKGLGLEFLRHIARTRVLLYVLDAADEPLKTLETLRKEVGAYDPALLRRPSLVALNKVDLLE 127 (180)
T ss_dssp SCEEEEEECCCCCCCGGGSCCSCHHHHHHHTSSSEEEEEEETTSCHHHHHHHHHHHHHHHCHHHHHSCEEEEEECCTTSC
T ss_pred CCeEEEcCCCeeecCchHHHHHHHHHHHHHHhhhhhhhhcccccccccchhhhhhhhhccccccchhhhhhhhhhhhhhh
Confidence 56788999999311000 00 123588899999865321100 0 00112345799999999998
Q ss_pred chhHhHHHHHHHHHhcCCCCCEEEEecccCCCHHHHHHHHhhhh
Q 030407 134 AIGADLAVMERDALRMRDGGPFIFAQVGWVIGIIFTLSITHYIV 177 (178)
Q Consensus 134 ~~~~~~~~~~~~l~~~np~a~i~~~SA~~g~gi~el~~~l~~~~ 177 (178)
+ .+.+.+.+.++. ...+++++||++|+|+++|++.|.+.+
T Consensus 128 ~--~~~~~~~~~~~~--~~~~~~~iSA~tg~gid~L~~~i~~~l 167 (180)
T d1udxa2 128 E--EAVKALADALAR--EGLAVLPVSALTGAGLPALKEALHALV 167 (180)
T ss_dssp H--HHHHHHHHHHHT--TTSCEEECCTTTCTTHHHHHHHHHHHH
T ss_pred H--HHHHHHHHHHHh--cCCeEEEEEcCCCCCHHHHHHHHHHHH
Confidence 8 777777777764 356999999999999999999987653
No 21
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.61 E-value=5.5e-08 Score=71.07 Aligned_cols=101 Identities=16% Similarity=0.134 Sum_probs=64.7
Q ss_pred CCCEEEEeCCcch----hhhcccccccceEEEEEeCCCCCCCCc---------CCCCCCCceeEEEEecCCCCCchhHhH
Q 030407 73 KADLLLCESGGDN----LAANFSRELADYIIYIIDVSGGDKIPR---------KGGPGITQADLLVINKTDLASAIGADL 139 (178)
Q Consensus 73 ~~d~iiiEttG~~----~~~~~~~~~ad~~I~VvD~~~~~~~~~---------~~~~qi~~adiiviNK~Dl~~~~~~~~ 139 (178)
....-+.+|+|.. +...+. ..+|++|+|+|.+....... .....-..+-++|.||+|+........
T Consensus 63 ~~~~~i~dt~G~e~~~~~~~~~~-~~~~~~i~v~d~~~~~s~~~~~~~~~~~~~~~~~~~~~iilv~nK~Dl~~~~~v~~ 141 (186)
T d2f7sa1 63 KVHLQLWDTAGQERFRSLTTAFF-RDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQREVNE 141 (186)
T ss_dssp EEEEEEEEEESHHHHHHHHHHHH-TTCCEEEEEEETTCHHHHHHHHHHHHTCCCCCTTTCCEEEEEEECTTCGGGCCSCH
T ss_pred eEEeccccCCcchhhHHHHHHHH-hcCCEEEEEEeccccccceeeeeccchhhhhccCCCceEEEEeeeccchhhhcchH
Confidence 3556778888831 112222 35799999999976432110 111112235689999999965421223
Q ss_pred HHHHHHHHhcCCCCCEEEEecccCCCHHHHHHHHhhh
Q 030407 140 AVMERDALRMRDGGPFIFAQVGWVIGIIFTLSITHYI 176 (178)
Q Consensus 140 ~~~~~~l~~~np~a~i~~~SA~~g~gi~el~~~l~~~ 176 (178)
+...+..++. +.+++++||++|+||+++|+.+.+.
T Consensus 142 ~e~~~~~~~~--~~~~~e~Sak~~~~i~e~f~~l~~~ 176 (186)
T d2f7sa1 142 RQARELADKY--GIPYFETSAATGQNVEKAVETLLDL 176 (186)
T ss_dssp HHHHHHHHHT--TCCEEEEBTTTTBTHHHHHHHHHHH
T ss_pred HHHHHHHHHc--CCEEEEEeCCCCCCHHHHHHHHHHH
Confidence 4455566654 4689999999999999999987654
No 22
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.60 E-value=6.7e-08 Score=69.77 Aligned_cols=102 Identities=13% Similarity=0.066 Sum_probs=61.0
Q ss_pred CCEEEEeCCcchhh---hcccccccceEEEEEeCCCCCCCCc--CC----------CCCCCceeEEEEecCCCCCchh-H
Q 030407 74 ADLLLCESGGDNLA---ANFSRELADYIIYIIDVSGGDKIPR--KG----------GPGITQADLLVINKTDLASAIG-A 137 (178)
Q Consensus 74 ~d~iiiEttG~~~~---~~~~~~~ad~~I~VvD~~~~~~~~~--~~----------~~qi~~adiiviNK~Dl~~~~~-~ 137 (178)
..+.+..|.|..-. .......++.+++++|.+....... .+ ...-..+-++++||+|+.+... .
T Consensus 52 ~~~~~~d~~g~~~~~~~~~~~~~~~~~~ilv~d~~~~~s~~~~~~~~~~i~~~~~~~~~~~~piilv~nK~Dl~~~~~~v 131 (175)
T d1ky3a_ 52 ATMQVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVILGNKIDAEESKKIV 131 (175)
T ss_dssp EEEEEECCC----------CCSTTCCEEEEEEETTCHHHHHTHHHHHHHHHHHHCCSCTTTCCEEEEEECTTSCGGGCCS
T ss_pred ccceeeccCCchhhhhHHHHHhhccceEEEEeecccccccchhhhcchhhhhhhhhcccccCcEEEEecccchhhhhcch
Confidence 45667888883111 1111235799999999976432111 00 0111346799999999975410 1
Q ss_pred hHHHHHHHHHhcCCCCCEEEEecccCCCHHHHHHHHhhh
Q 030407 138 DLAVMERDALRMRDGGPFIFAQVGWVIGIIFTLSITHYI 176 (178)
Q Consensus 138 ~~~~~~~~l~~~np~a~i~~~SA~~g~gi~el~~~l~~~ 176 (178)
..+..++..++. ...+++++||++|+||+++|+.|.+.
T Consensus 132 ~~~~~~~~~~~~-~~~~~~e~SA~~g~gv~e~f~~l~~~ 169 (175)
T d1ky3a_ 132 SEKSAQELAKSL-GDIPLFLTSAKNAINVDTAFEEIARS 169 (175)
T ss_dssp CHHHHHHHHHHT-TSCCEEEEBTTTTBSHHHHHHHHHHH
T ss_pred hHHHHHHHHHHc-CCCeEEEEeCCCCcCHHHHHHHHHHH
Confidence 123344444443 45689999999999999999987653
No 23
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.58 E-value=5.8e-08 Score=70.90 Aligned_cols=101 Identities=12% Similarity=0.091 Sum_probs=63.2
Q ss_pred CCCEEEEeCCcchhhh---cccccccceEEEEEeCCCCCCCCc--CC--------CC--CCCceeEEEEecCCCCCchhH
Q 030407 73 KADLLLCESGGDNLAA---NFSRELADYIIYIIDVSGGDKIPR--KG--------GP--GITQADLLVINKTDLASAIGA 137 (178)
Q Consensus 73 ~~d~iiiEttG~~~~~---~~~~~~ad~~I~VvD~~~~~~~~~--~~--------~~--qi~~adiiviNK~Dl~~~~~~ 137 (178)
.+.+.+.++.|..-.. ......++++++++|.+....... .+ .. .-..+-++|.||+|+.+.. .
T Consensus 50 ~~~~~~~d~~g~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~ip~ilv~nK~Dl~~~~-~ 128 (184)
T d1vg8a_ 50 LVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQ-V 128 (184)
T ss_dssp EEEEEEEEECSSGGGSCSCCGGGTTCSEEEEEEETTCHHHHHTHHHHHHHHHHHHCCSSGGGSCEEEEEECTTSSCCC-S
T ss_pred eEEEEeeecCCcccccccccccccCccEEEEeecccchhhhhcchhhHHHHHHHhccccccCCCEEEEEEeecccccc-h
Confidence 4677888999932111 111234799999999976432110 00 00 1123569999999987641 2
Q ss_pred hHHHHHHHHHhcCCCCCEEEEecccCCCHHHHHHHHhh
Q 030407 138 DLAVMERDALRMRDGGPFIFAQVGWVIGIIFTLSITHY 175 (178)
Q Consensus 138 ~~~~~~~~l~~~np~a~i~~~SA~~g~gi~el~~~l~~ 175 (178)
..+...+.... ....++++|||++|.||+++|+.|.+
T Consensus 129 ~~~~~~~~~~~-~~~~~~~e~Sak~~~gI~e~f~~l~~ 165 (184)
T d1vg8a_ 129 ATKRAQAWCYS-KNNIPYFETSAKEAINVEQAFQTIAR 165 (184)
T ss_dssp CHHHHHHHHHH-TTSCCEEECBTTTTBSHHHHHHHHHH
T ss_pred hHHHHHHHHHH-hcCCeEEEEcCCCCcCHHHHHHHHHH
Confidence 22333333333 34679999999999999999998754
No 24
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.57 E-value=3e-08 Score=71.66 Aligned_cols=99 Identities=14% Similarity=0.053 Sum_probs=63.7
Q ss_pred CCCEEEEeCCcch----hhhcccccccceEEEEEeCCCCCCCCc---CC-----CCCCCceeEEEEecCCCCCchhHhHH
Q 030407 73 KADLLLCESGGDN----LAANFSRELADYIIYIIDVSGGDKIPR---KG-----GPGITQADLLVINKTDLASAIGADLA 140 (178)
Q Consensus 73 ~~d~iiiEttG~~----~~~~~~~~~ad~~I~VvD~~~~~~~~~---~~-----~~qi~~adiiviNK~Dl~~~~~~~~~ 140 (178)
.+.+.+++|.|.. +...+. ..++.+++|+|.++...... .+ ...-..+-++|.||+|+........+
T Consensus 53 ~~~l~i~Dt~G~e~~~~~~~~~~-~~~~~~i~v~d~~~~~s~~~~~~~~~~i~~~~~~~~~~ilvgnK~D~~~~~~v~~~ 131 (171)
T d2ew1a1 53 KVKLQIWDTAGQERFRSITQSYY-RSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQ 131 (171)
T ss_dssp EEEEEEEEECCSGGGHHHHGGGS-TTCSEEEEEEETTCHHHHHTHHHHHHHHHHHSCTTCEEEEEEECGGGGGGCSSCHH
T ss_pred EEEEEEEECCCchhhHHHHHHHH-hccceEEEeeecccchhhhhhhhhhhhhcccccccccEEEEEeecccccccchhhh
Confidence 4678889999931 112222 35799999999876432211 00 01113456888999998654212344
Q ss_pred HHHHHHHhcCCCCCEEEEecccCCCHHHHHHHHh
Q 030407 141 VMERDALRMRDGGPFIFAQVGWVIGIIFTLSITH 174 (178)
Q Consensus 141 ~~~~~l~~~np~a~i~~~SA~~g~gi~el~~~l~ 174 (178)
...+..+.. +.+++++||++|+||+++|..|.
T Consensus 132 ~~~~~~~~~--~~~~~~~SAktg~gV~e~f~~l~ 163 (171)
T d2ew1a1 132 RAEEFSEAQ--DMYYLETSAKESDNVEKLFLDLA 163 (171)
T ss_dssp HHHHHHHHH--TCCEEECCTTTCTTHHHHHHHHH
T ss_pred HHHHHHHhC--CCEEEEEccCCCCCHHHHHHHHH
Confidence 555555544 35899999999999999987654
No 25
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.57 E-value=2.7e-08 Score=71.60 Aligned_cols=100 Identities=14% Similarity=0.088 Sum_probs=65.5
Q ss_pred CCCEEEEeCCcch----hhhcccccccceEEEEEeCCCCCCCCc--C------CCCCCCceeEEEEecCCCCCchhHhHH
Q 030407 73 KADLLLCESGGDN----LAANFSRELADYIIYIIDVSGGDKIPR--K------GGPGITQADLLVINKTDLASAIGADLA 140 (178)
Q Consensus 73 ~~d~iiiEttG~~----~~~~~~~~~ad~~I~VvD~~~~~~~~~--~------~~~qi~~adiiviNK~Dl~~~~~~~~~ 140 (178)
.+.+.+.++.|.. +...+. ..+|++++|+|.++...... . ....-..+-+++.||+|+........+
T Consensus 52 ~~~l~i~D~~g~~~~~~~~~~~~-~~~d~~ilv~d~~~~~s~~~~~~~~~~~~~~~~~~~~iilvgnK~Dl~~~~~~~~~ 130 (166)
T d1z0fa1 52 KIKLQIWDTAGQERFRAVTRSYY-RGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYE 130 (166)
T ss_dssp EEEEEEEECTTGGGTCHHHHHHH-HTCSEEEEEEETTCHHHHHTHHHHHHHHHHHSCTTCEEEEEEECTTCGGGCCSCHH
T ss_pred EEEEEEeccCCchhHHHHHHHHh-cCCcEEEEEeccCchHHHHHHHHHHHHHHhhccccceEEEEcccccchhhcccHHH
Confidence 4678889999932 112222 24799999999976532211 0 001123456888999999654223334
Q ss_pred HHHHHHHhcCCCCCEEEEecccCCCHHHHHHHHhh
Q 030407 141 VMERDALRMRDGGPFIFAQVGWVIGIIFTLSITHY 175 (178)
Q Consensus 141 ~~~~~l~~~np~a~i~~~SA~~g~gi~el~~~l~~ 175 (178)
..++..++. ..+++++||++|+||+++|+.|.+
T Consensus 131 ~~~~~~~~~--~~~~~e~Saktg~~v~e~f~~i~~ 163 (166)
T d1z0fa1 131 EAKQFAEEN--GLLFLEASAKTGENVEDAFLEAAK 163 (166)
T ss_dssp HHHHHHHHT--TCEEEECCTTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHc--CCEEEEEeCCCCCCHHHHHHHHHH
Confidence 556666654 468999999999999999987754
No 26
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.57 E-value=2.2e-08 Score=71.78 Aligned_cols=102 Identities=18% Similarity=0.082 Sum_probs=66.6
Q ss_pred CCCEEEEeCCcchhhh---cccccccceEEEEEeCCCCCCCCc---CCC-----CCCCceeEEEEecCCCCCchhHhHHH
Q 030407 73 KADLLLCESGGDNLAA---NFSRELADYIIYIIDVSGGDKIPR---KGG-----PGITQADLLVINKTDLASAIGADLAV 141 (178)
Q Consensus 73 ~~d~iiiEttG~~~~~---~~~~~~ad~~I~VvD~~~~~~~~~---~~~-----~qi~~adiiviNK~Dl~~~~~~~~~~ 141 (178)
.+.+-++++.|...-. ......++.+++++|.++...... .+. ..-..+-++|.||+|+.+......+.
T Consensus 48 ~~~~~i~d~~g~~~~~~~~~~~~~~~~~~ilv~d~~~~~s~~~i~~~~~~~~~~~~~~~~iilvgnK~Dl~~~~~~~~~~ 127 (164)
T d1yzqa1 48 TIRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEE 127 (164)
T ss_dssp EEEEEEEEECCSGGGGGGHHHHHTTCSEEEEEEETTCHHHHHTHHHHHHHHHHHHTTSSEEEEEEECTTCGGGCCSCHHH
T ss_pred ceeeeecccCCcchhccchHHHhhccceEEEeeccccccchhhhHhhHHHHHHhcCCCceEEEEecccchhhhhhhhHHH
Confidence 4566788898832111 111224799999999977543211 000 01234578889999997542234455
Q ss_pred HHHHHHhcCCCCCEEEEecccCCCHHHHHHHHhhh
Q 030407 142 MERDALRMRDGGPFIFAQVGWVIGIIFTLSITHYI 176 (178)
Q Consensus 142 ~~~~l~~~np~a~i~~~SA~~g~gi~el~~~l~~~ 176 (178)
..+..++. +++++++||++|+||+++|+.|.+.
T Consensus 128 ~~~~~~~~--~~~~~e~SAk~g~~v~e~f~~i~~~ 160 (164)
T d1yzqa1 128 GERKAKEL--NVMFIETSAKAGYNVKQLFRRVAAA 160 (164)
T ss_dssp HHHHHHHT--TCEEEECCTTTCTTHHHHHHHHHHH
T ss_pred HHHHHHHc--CCEEEEecCCCCcCHHHHHHHHHHh
Confidence 66666655 4689999999999999999988764
No 27
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]}
Probab=98.56 E-value=5.4e-08 Score=69.77 Aligned_cols=102 Identities=18% Similarity=0.060 Sum_probs=65.9
Q ss_pred CCCEEEEeCCcchh----hhcccccccceEEEEEeCCCCCCCCc---------CCCCCCCceeEEEEecCCCCCchhHhH
Q 030407 73 KADLLLCESGGDNL----AANFSRELADYIIYIIDVSGGDKIPR---------KGGPGITQADLLVINKTDLASAIGADL 139 (178)
Q Consensus 73 ~~d~iiiEttG~~~----~~~~~~~~ad~~I~VvD~~~~~~~~~---------~~~~qi~~adiiviNK~Dl~~~~~~~~ 139 (178)
+..+.++|+.|... ...+ ...++.+++|+|++....... .....-..+-++|.||.|+... ...
T Consensus 46 ~~~~~i~D~~G~~~~~~~~~~~-~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~pi~lv~nK~Dl~~~--~~~ 122 (164)
T d1zd9a1 46 NVTIKLWDIGGQPRFRSMWERY-CRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLPGA--LDE 122 (164)
T ss_dssp TEEEEEEEECCSHHHHTTHHHH-HTTCSEEEEEEETTCGGGHHHHHHHHHHHHTCGGGTTCCEEEEEECTTSTTC--CCH
T ss_pred eEEEEEeecccccccccccccc-ccccchhhcccccccccccchhhhhhhhhhhhhcccCCcEEEEEeccccchh--hhH
Confidence 46678899999321 1111 134799999999976432211 0001113467899999999765 344
Q ss_pred HHHHHHHHhc---CCCCCEEEEecccCCCHHHHHHHHhhhh
Q 030407 140 AVMERDALRM---RDGGPFIFAQVGWVIGIIFTLSITHYIV 177 (178)
Q Consensus 140 ~~~~~~l~~~---np~a~i~~~SA~~g~gi~el~~~l~~~~ 177 (178)
..+.+.+... ....+++++||++|+|++++|++|.+.+
T Consensus 123 ~~i~~~~~~~~~~~~~~~~~e~Sa~~g~gv~e~~~~l~~~~ 163 (164)
T d1zd9a1 123 KELIEKMNLSAIQDREICCYSISCKEKDNIDITLQWLIQHS 163 (164)
T ss_dssp HHHHHHTTGGGCCSSCEEEEECCTTTCTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhCCCEEEEEeCcCCcCHHHHHHHHHHcc
Confidence 4444444211 2346889999999999999999987754
No 28
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.55 E-value=1.9e-08 Score=72.53 Aligned_cols=101 Identities=16% Similarity=0.103 Sum_probs=65.1
Q ss_pred CCCEEEEeCCcchhhh---cccccccceEEEEEeCCCCCCCCc--C-CC-----CCCCceeEEEEecCCCCCchhHhHHH
Q 030407 73 KADLLLCESGGDNLAA---NFSRELADYIIYIIDVSGGDKIPR--K-GG-----PGITQADLLVINKTDLASAIGADLAV 141 (178)
Q Consensus 73 ~~d~iiiEttG~~~~~---~~~~~~ad~~I~VvD~~~~~~~~~--~-~~-----~qi~~adiiviNK~Dl~~~~~~~~~~ 141 (178)
.+.+-+.++.|..-.. ......+|++++|+|.++...... . +. ......-+++.||+|+........++
T Consensus 51 ~~~~~~~d~~g~~~~~~~~~~~~~~~~~~i~v~d~~~~~Sf~~~~~~~~~~~~~~~~~~~~ilvgnK~Dl~~~~~v~~~e 130 (167)
T d1z08a1 51 RVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQE 130 (167)
T ss_dssp EEEEEEEECCCC-------CCSSTTCSEEEEEEETTCHHHHHHHHHHHHHHHHHHGGGSEEEEEEECGGGGGGCCSCHHH
T ss_pred cceeeeeccCCcceecccchhhccCCceeEEEEeCCchhHHHhhhhhhhhcccccccccceeeeccccccccccccchHH
Confidence 4778889999942111 111235799999999987543211 0 00 01233567889999997542123455
Q ss_pred HHHHHHhcCCCCCEEEEecccCCCHHHHHHHHhh
Q 030407 142 MERDALRMRDGGPFIFAQVGWVIGIIFTLSITHY 175 (178)
Q Consensus 142 ~~~~l~~~np~a~i~~~SA~~g~gi~el~~~l~~ 175 (178)
.++..++. +.+++++||++|+||+++|+.|.+
T Consensus 131 ~~~~a~~~--~~~~~e~Sak~~~~v~e~F~~l~~ 162 (167)
T d1z08a1 131 AESYAESV--GAKHYHTSAKQNKGIEELFLDLCK 162 (167)
T ss_dssp HHHHHHHT--TCEEEEEBTTTTBSHHHHHHHHHH
T ss_pred HHHHHHHc--CCeEEEEecCCCcCHHHHHHHHHH
Confidence 66666655 468999999999999999987654
No 29
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.55 E-value=3.6e-08 Score=70.97 Aligned_cols=100 Identities=14% Similarity=0.053 Sum_probs=63.6
Q ss_pred CCCEEEEeCCcch----hhhcccccccceEEEEEeCCCCCCCCc--C------CCCCCCceeEEEEecCCCCCchhHhHH
Q 030407 73 KADLLLCESGGDN----LAANFSRELADYIIYIIDVSGGDKIPR--K------GGPGITQADLLVINKTDLASAIGADLA 140 (178)
Q Consensus 73 ~~d~iiiEttG~~----~~~~~~~~~ad~~I~VvD~~~~~~~~~--~------~~~qi~~adiiviNK~Dl~~~~~~~~~ 140 (178)
...+.+.++.|.. +...+ ...++++++++|.+....... . ....-..+-++|.||+|+.+......+
T Consensus 52 ~~~~~i~d~~g~~~~~~~~~~~-~~~~~~~i~v~d~~~~~s~~~~~~~~~~~~~~~~~~~~iilvgnK~Dl~~~~~v~~~ 130 (167)
T d1z0ja1 52 LHKFLIWDTAGLERFRALAPMY-YRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLTDVREVMER 130 (167)
T ss_dssp EEEEEEEEECCSGGGGGGTHHH-HTTCSEEEEEEETTCHHHHHHHHHHHHHHHHHSCTTSEEEEEEECTTCGGGCCSCHH
T ss_pred ccceeeeecCCchhhhHHHHHH-HhhccceEEEeeechhhhhhhHHHhhhhhhhccCCcceEEEecccchhccccchhHH
Confidence 3456678888831 11112 234799999999876432211 0 001123466899999999653212334
Q ss_pred HHHHHHHhcCCCCCEEEEecccCCCHHHHHHHHhh
Q 030407 141 VMERDALRMRDGGPFIFAQVGWVIGIIFTLSITHY 175 (178)
Q Consensus 141 ~~~~~l~~~np~a~i~~~SA~~g~gi~el~~~l~~ 175 (178)
..++..+.. +.+++++||++|+||+++|..|.+
T Consensus 131 ~~~~~~~~~--~~~~~e~SAk~~~nV~e~f~~l~~ 163 (167)
T d1z0ja1 131 DAKDYADSI--HAIFVETSAKNAININELFIEISR 163 (167)
T ss_dssp HHHHHHHHT--TCEEEECBTTTTBSHHHHHHHHHH
T ss_pred HHHHHHHHc--CCEEEEEecCCCCCHHHHHHHHHH
Confidence 455555554 468999999999999999998755
No 30
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=98.54 E-value=1.3e-08 Score=73.51 Aligned_cols=79 Identities=16% Similarity=0.109 Sum_probs=52.6
Q ss_pred ccceEEEEEeCCCCCCCCcC-CCC---CCCceeEEEEecCCCCCchhHhHHHHHHHHHhcCCCCCEEEEecccCCCHHHH
Q 030407 94 LADYIIYIIDVSGGDKIPRK-GGP---GITQADLLVINKTDLASAIGADLAVMERDALRMRDGGPFIFAQVGWVIGIIFT 169 (178)
Q Consensus 94 ~ad~~I~VvD~~~~~~~~~~-~~~---qi~~adiiviNK~Dl~~~~~~~~~~~~~~l~~~np~a~i~~~SA~~g~gi~el 169 (178)
.+|.+++++|+..+...... ... ....+-++|+||+|+.++ .+. +..+.+.+. +..+++++||++|.||++|
T Consensus 80 ~ad~i~~~~~~~~~~~~~~~~~~~~l~~~~~pviiv~NK~Dl~~~--~~~-~~~~~~~~~-~~~~~i~iSAk~g~gid~L 155 (171)
T d1mkya1 80 EADLVLFVVDGKRGITKEDESLADFLRKSTVDTILVANKAENLRE--FER-EVKPELYSL-GFGEPIPVSAEHNINLDTM 155 (171)
T ss_dssp TCSEEEEEEETTTCCCHHHHHHHHHHHHHTCCEEEEEESCCSHHH--HHH-HTHHHHGGG-SSCSCEECBTTTTBSHHHH
T ss_pred cCcEEEEeecccccccccccccccccccccccccccchhhhhhhh--hhh-HHHHHHHhc-CCCCeEEEecCCCCCHHHH
Confidence 46889999998765432211 101 123356999999999765 333 333333333 3457899999999999999
Q ss_pred HHHHhhh
Q 030407 170 LSITHYI 176 (178)
Q Consensus 170 ~~~l~~~ 176 (178)
+++|.+.
T Consensus 156 ~~~i~~~ 162 (171)
T d1mkya1 156 LETIIKK 162 (171)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9988754
No 31
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.53 E-value=2.2e-08 Score=72.59 Aligned_cols=100 Identities=10% Similarity=-0.070 Sum_probs=65.8
Q ss_pred hCCCCEEEEeCCcchh----hhcccccccceEEEEEeCCCCCCCCcC---CCC----CCCceeEEEEecCCCCCchhHhH
Q 030407 71 LFKADLLLCESGGDNL----AANFSRELADYIIYIIDVSGGDKIPRK---GGP----GITQADLLVINKTDLASAIGADL 139 (178)
Q Consensus 71 ~~~~d~iiiEttG~~~----~~~~~~~~ad~~I~VvD~~~~~~~~~~---~~~----qi~~adiiviNK~Dl~~~~~~~~ 139 (178)
...+.+.++++.|... ...+. ..++++++|+|+++....... +.. .-..+-++|.||+|+... ...
T Consensus 49 ~~~~~l~i~D~~g~~~~~~~~~~~~-~~~~~~ilv~d~~~~~Sf~~~~~~~~~~~~~~~~~piilvgnK~Dl~~~--~~~ 125 (170)
T d1i2ma_ 49 RGPIKFNVWDTAGQEKFGGLRDGYY-IQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDR--KVK 125 (170)
T ss_dssp TCCEEEEEEECTTHHHHSSCGGGGT-TTCCEEEEEEETTSGGGGTTHHHHHHHHHHHHCSCCEEEEEECCCCSCS--CCT
T ss_pred cccccccccccccccccceecchhc-ccccchhhccccccccccchhHHHHHHHhhccCCCceeeecchhhhhhh--hhh
Confidence 3467889999999321 12222 257999999999886543210 000 013456999999999765 222
Q ss_pred HHHHHHHHhcCCCCCEEEEecccCCCHHHHHHHHhh
Q 030407 140 AVMERDALRMRDGGPFIFAQVGWVIGIIFTLSITHY 175 (178)
Q Consensus 140 ~~~~~~l~~~np~a~i~~~SA~~g~gi~el~~~l~~ 175 (178)
++.....+. .+.+++++||++|+||+++|+.|.+
T Consensus 126 ~~~~~~~~~--~~~~~~e~Sak~~~~v~e~f~~l~~ 159 (170)
T d1i2ma_ 126 AKSIVFHRK--KNLQYYDISAKSNYNFEKPFLWLAR 159 (170)
T ss_dssp TTSHHHHSS--CSSEEEEEBTTTTBTTTHHHHHHHH
T ss_pred hHHHHHHHH--cCCEEEEEeCCCCCCHHHHHHHHHH
Confidence 333333333 3568999999999999999988754
No 32
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.52 E-value=1.5e-08 Score=72.84 Aligned_cols=101 Identities=15% Similarity=0.061 Sum_probs=64.5
Q ss_pred CCCEEEEeCCcchhhhcc---cccccceEEEEEeCCCCCCCCc--CCCCC-----CCceeEEEEecCCCCCchhHhHHHH
Q 030407 73 KADLLLCESGGDNLAANF---SRELADYIIYIIDVSGGDKIPR--KGGPG-----ITQADLLVINKTDLASAIGADLAVM 142 (178)
Q Consensus 73 ~~d~iiiEttG~~~~~~~---~~~~ad~~I~VvD~~~~~~~~~--~~~~q-----i~~adiiviNK~Dl~~~~~~~~~~~ 142 (178)
.+.+.++.|.|..-.... ....++.+++|+|.++...... .+..+ -..+-++|.||+|+.++.....++.
T Consensus 50 ~~~~~i~d~~g~~~~~~~~~~~~~~~~~~i~v~d~~~~~s~~~~~~~~~~i~~~~~~~~iilVgnK~Dl~~~~~v~~~~~ 129 (164)
T d1z2aa1 50 DVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEVGDIPTALVQNKIDLLDDSCIKNEEA 129 (164)
T ss_dssp EEEEEEECCTTGGGTTCCCHHHHTTCCEEEEEEETTCHHHHHTHHHHHHHHHHHHCSCCEEEEEECGGGGGGCSSCHHHH
T ss_pred eeeeeeeccCCccchhhhhhhhhccCceEEEEEeccchhhhhhcccccccccccCCCceEEEeeccCCcccceeeeehhh
Confidence 467888899983211111 1234799999999987543211 00000 1234688899999975421223445
Q ss_pred HHHHHhcCCCCCEEEEecccCCCHHHHHHHHhh
Q 030407 143 ERDALRMRDGGPFIFAQVGWVIGIIFTLSITHY 175 (178)
Q Consensus 143 ~~~l~~~np~a~i~~~SA~~g~gi~el~~~l~~ 175 (178)
++..++.+ .+++++||++|.||+++|+.|.+
T Consensus 130 ~~~~~~~~--~~~~e~Sak~g~~v~e~f~~l~~ 160 (164)
T d1z2aa1 130 EGLAKRLK--LRFYRTSVKEDLNVSEVFKYLAE 160 (164)
T ss_dssp HHHHHHHT--CEEEECBTTTTBSSHHHHHHHHH
T ss_pred HHHHHHcC--CEEEEeccCCCcCHHHHHHHHHH
Confidence 55566553 58999999999999999998754
No 33
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.52 E-value=7.1e-08 Score=69.68 Aligned_cols=101 Identities=15% Similarity=0.044 Sum_probs=66.5
Q ss_pred CCCEEEEeCCcchh----hhcccccccceEEEEEeCCCCCCCCc---C------CCCCCCceeEEEEecCCCCCchhHhH
Q 030407 73 KADLLLCESGGDNL----AANFSRELADYIIYIIDVSGGDKIPR---K------GGPGITQADLLVINKTDLASAIGADL 139 (178)
Q Consensus 73 ~~d~iiiEttG~~~----~~~~~~~~ad~~I~VvD~~~~~~~~~---~------~~~qi~~adiiviNK~Dl~~~~~~~~ 139 (178)
...+-++++.|..- ...+. ..+|++++|+|.++...... . ....-..+-+++.||+|+........
T Consensus 51 ~~~~~i~d~~g~~~~~~~~~~~~-~~~~~~llv~d~~d~~Sf~~~~~~~~~i~~~~~~~~~p~ilvgnK~Dl~~~~~v~~ 129 (169)
T d1x1ra1 51 WAILDVLDTAGQEEFSAMREQYM-RTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLRKVTR 129 (169)
T ss_dssp EEEEEEEECCSCGGGCSSHHHHH-HHCSEEEEEEETTCHHHHHTHHHHHHHHHHHHTSSCCCEEEEEECTTCSTTCCSCH
T ss_pred cccccccccccccccccchhhhh-hhccEEEEecccccchhhhccchhhHHHHhhccccCccEEEEecccchhhhceeeh
Confidence 46677889999321 11122 24799999999987532211 0 11112334689999999976522334
Q ss_pred HHHHHHHHhcCCCCCEEEEecccCC-CHHHHHHHHhhh
Q 030407 140 AVMERDALRMRDGGPFIFAQVGWVI-GIIFTLSITHYI 176 (178)
Q Consensus 140 ~~~~~~l~~~np~a~i~~~SA~~g~-gi~el~~~l~~~ 176 (178)
++..++.++.+ .+++++|||+|. ||+++|+.|.+.
T Consensus 130 e~~~~~~~~~~--~~~~e~Sak~~~~nV~~~F~~l~~~ 165 (169)
T d1x1ra1 130 DQGKEMATKYN--IPYIETSAKDPPLNVDKTFHDLVRV 165 (169)
T ss_dssp HHHHHHHHHHT--CCEEEEBCSSSCBSHHHHHHHHHHH
T ss_pred hhHHHHHHHcC--CEEEEEcCCCCCcCHHHHHHHHHHH
Confidence 56667777664 589999999986 999999977653
No 34
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.50 E-value=4.5e-08 Score=70.97 Aligned_cols=102 Identities=12% Similarity=0.077 Sum_probs=62.1
Q ss_pred CCCEEEEeCCcch-hh---hcccccccceEEEEEeCCCCCCCCc---------CCCCCCCceeEEEEecCCCCCchhHhH
Q 030407 73 KADLLLCESGGDN-LA---ANFSRELADYIIYIIDVSGGDKIPR---------KGGPGITQADLLVINKTDLASAIGADL 139 (178)
Q Consensus 73 ~~d~iiiEttG~~-~~---~~~~~~~ad~~I~VvD~~~~~~~~~---------~~~~qi~~adiiviNK~Dl~~~~~~~~ 139 (178)
.+...+++..|.. .. .......+|++|+|+|+++...... .....-..+-++|.||+|+.+......
T Consensus 52 ~~~~~~~d~~~~~g~e~~~~~~~~~~~~~~ilvfd~t~~~s~~~~~~~~~~i~~~~~~~~~piilvgnK~Dl~~~~~v~~ 131 (172)
T d2g3ya1 52 SATIILLDMWENKGENEWLHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILVGNKSDLVRCREVSV 131 (172)
T ss_dssp EEEEEEECCTTTTHHHHHHHHCCCCCCSEEEEEEETTCHHHHHHHHHHHHHHHTSGGGTTSCEEEEEECTTCGGGCCSCH
T ss_pred eeeeeeeccccccccccccccccccccceeeeeecccccchhhhhhhhhhhhhhccccCCceEEEEeccccccccccccH
Confidence 4556677754421 11 1112235799999999987532210 010111345699999999865421223
Q ss_pred HHHHHHHHhcCCCCCEEEEecccCCCHHHHHHHHhhh
Q 030407 140 AVMERDALRMRDGGPFIFAQVGWVIGIIFTLSITHYI 176 (178)
Q Consensus 140 ~~~~~~l~~~np~a~i~~~SA~~g~gi~el~~~l~~~ 176 (178)
+..++..+.. +.+++++||++|+||+++|+.|.+.
T Consensus 132 ~~~~~~a~~~--~~~~~e~Sak~g~~i~~~f~~l~~~ 166 (172)
T d2g3ya1 132 SEGRACAVVF--DCKFIETSAAVQHNVKELFEGIVRQ 166 (172)
T ss_dssp HHHHHHHHHH--TCEEEECBTTTTBSHHHHHHHHHHH
T ss_pred HHHHHHHHHc--CCeEEEEeCCCCcCHHHHHHHHHHH
Confidence 3444444444 3689999999999999999987653
No 35
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]}
Probab=98.50 E-value=2.6e-08 Score=71.99 Aligned_cols=100 Identities=10% Similarity=0.048 Sum_probs=64.1
Q ss_pred CCCEEEEeCCcchh----hhcccccccceEEEEEeCCCCCCCCc--CC-------CCCCCceeEEEEecCCCCCchhHhH
Q 030407 73 KADLLLCESGGDNL----AANFSRELADYIIYIIDVSGGDKIPR--KG-------GPGITQADLLVINKTDLASAIGADL 139 (178)
Q Consensus 73 ~~d~iiiEttG~~~----~~~~~~~~ad~~I~VvD~~~~~~~~~--~~-------~~qi~~adiiviNK~Dl~~~~~~~~ 139 (178)
.+.+.++++.|..- ...+. ..+|++++|+|..+...... .+ ...-..+-++|.||+|+.+......
T Consensus 51 ~~~l~i~d~~g~~~~~~~~~~~~-~~~~~~ilv~d~~~~~s~~~~~~~~~~i~~~~~~~~~piiivgnK~Dl~~~~~v~~ 129 (168)
T d1u8za_ 51 EVQIDILDTAGQEDYAAIRDNYF-RSGEGFLCVFSITEMESFAATADFREQILRVKEDENVPFLLVGNKSDLEDKRQVSV 129 (168)
T ss_dssp EEEEEEEECCC---CHHHHHHHH-HHCSEEEEEEETTCHHHHHHHHHHHHHHHHHHCCTTSCEEEEEECGGGGGGCCSCH
T ss_pred cccccccccccccchhhhhhhcc-cccceeEEEeeccchhhhhhHHHHHHHHHHhhCCCCCcEEEEeccccccccccccH
Confidence 57778899999321 11122 24799999999977432211 00 0011335689999999864311233
Q ss_pred HHHHHHHHhcCCCCCEEEEecccCCCHHHHHHHHhh
Q 030407 140 AVMERDALRMRDGGPFIFAQVGWVIGIIFTLSITHY 175 (178)
Q Consensus 140 ~~~~~~l~~~np~a~i~~~SA~~g~gi~el~~~l~~ 175 (178)
+..+++.++.+ .+++++||++|+||+++|+.|.+
T Consensus 130 ~~~~~~~~~~~--~~~~e~Sak~g~gv~e~f~~l~~ 163 (168)
T d1u8za_ 130 EEAKNRADQWN--VNYVETSAKTRANVDKVFFDLMR 163 (168)
T ss_dssp HHHHHHHHHHT--CEEEECCTTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHcC--CeEEEEcCCCCcCHHHHHHHHHH
Confidence 55666666653 68999999999999999997654
No 36
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.48 E-value=5.7e-08 Score=70.15 Aligned_cols=101 Identities=12% Similarity=0.118 Sum_probs=64.3
Q ss_pred CCCEEEEeCCcch----hhhcccccccceEEEEEeCCCCCCCCc--C-------CCCCCCceeEEEEecCCCCCchhHhH
Q 030407 73 KADLLLCESGGDN----LAANFSRELADYIIYIIDVSGGDKIPR--K-------GGPGITQADLLVINKTDLASAIGADL 139 (178)
Q Consensus 73 ~~d~iiiEttG~~----~~~~~~~~~ad~~I~VvD~~~~~~~~~--~-------~~~qi~~adiiviNK~Dl~~~~~~~~ 139 (178)
.+..-++++.|.. ....+. ..+|.+++|+|.+....... . ....-..+-++|.||+|+........
T Consensus 52 ~~~~~~~d~~g~~~~~~~~~~~~-~~~~~~ilv~d~~~~~s~~~~~~~~~~~~~~~~~~~~p~ilvgnK~Dl~~~~~v~~ 130 (171)
T d2erya1 52 AARLDILDTAGQEEFGAMREQYM-RTGEGFLLVFSVTDRGSFEEIYKFQRQILRVKDRDEFPMILIGNKADLDHQRQVTQ 130 (171)
T ss_dssp EEEEEEEECC----CCHHHHHHH-HHCSEEEEEEETTCHHHHHTHHHHHHHHHHHHTSSCCSEEEEEECTTCTTSCSSCH
T ss_pred ccccccccccccccccccccccc-cccceEEEeeccccccchhhHHHHhHHHHhhcccCCCCEEEEEeccchhhhccchH
Confidence 4567788888831 111122 24799999999877532211 0 00112345689999999975421233
Q ss_pred HHHHHHHHhcCCCCCEEEEecccCCCHHHHHHHHhhh
Q 030407 140 AVMERDALRMRDGGPFIFAQVGWVIGIIFTLSITHYI 176 (178)
Q Consensus 140 ~~~~~~l~~~np~a~i~~~SA~~g~gi~el~~~l~~~ 176 (178)
+...++.++.+ .+++++||++|+||+++|+.|.+.
T Consensus 131 ~~~~~~~~~~~--~~~~e~Sak~~~~i~e~f~~l~~~ 165 (171)
T d2erya1 131 EEGQQLARQLK--VTYMEASAKIRMNVDQAFHELVRV 165 (171)
T ss_dssp HHHHHHHHHTT--CEEEECBTTTTBSHHHHHHHHHHH
T ss_pred HHHHHHHHHcC--CEEEEEcCCCCcCHHHHHHHHHHH
Confidence 45666666653 589999999999999999988654
No 37
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]}
Probab=98.48 E-value=1.9e-07 Score=67.11 Aligned_cols=102 Identities=13% Similarity=0.075 Sum_probs=63.5
Q ss_pred CCCEEEEeCCcchhhhcc---cccccceEEEEEeCCCCCCCCc---------CCCCCCCceeEEEEecCCCCCchhHhHH
Q 030407 73 KADLLLCESGGDNLAANF---SRELADYIIYIIDVSGGDKIPR---------KGGPGITQADLLVINKTDLASAIGADLA 140 (178)
Q Consensus 73 ~~d~iiiEttG~~~~~~~---~~~~ad~~I~VvD~~~~~~~~~---------~~~~qi~~adiiviNK~Dl~~~~~~~~~ 140 (178)
+....+....|....... ....++.++.++|.++...... .....-..+-++|+||+|+... ...+
T Consensus 58 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~i~v~d~~d~~~~~~~~~~~~~~~~~~~~~~~p~iiv~nK~Dl~~~--~~~~ 135 (177)
T d1zj6a1 58 NTRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKEC--MTVA 135 (177)
T ss_dssp TEEEEEEECCC----CGGGHHHHTTCCEEEEEEETTCTTTHHHHHHHHHHHHTSGGGTTCEEEEEEECTTSTTC--CCHH
T ss_pred ceEEEEeccccccccccchhhhhccceeeeeecccccccchhhhhhhhhhhhhcccccceEEEEEEEccccccc--CcHH
Confidence 456677777663111111 1124688999999876543211 0111234567999999999766 4444
Q ss_pred HHHHHHHhc---CCCCCEEEEecccCCCHHHHHHHHhhh
Q 030407 141 VMERDALRM---RDGGPFIFAQVGWVIGIIFTLSITHYI 176 (178)
Q Consensus 141 ~~~~~l~~~---np~a~i~~~SA~~g~gi~el~~~l~~~ 176 (178)
.+.+..+.. ....+++++||++|+|++|++++|.+.
T Consensus 136 ~i~~~~~~~~~~~~~~~~~~~Sa~tg~Gi~e~~~~L~~~ 174 (177)
T d1zj6a1 136 EISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSR 174 (177)
T ss_dssp HHHHHHTGGGCCSSCEEEEECBTTTTBTHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHhcCCEEEEEeCCCCCCHHHHHHHHHHH
Confidence 444444321 234589999999999999999998764
No 38
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.48 E-value=3.3e-08 Score=71.72 Aligned_cols=101 Identities=12% Similarity=0.038 Sum_probs=64.9
Q ss_pred CCCEEEEeCCcchh----hhcccccccceEEEEEeCCCCCCCCc--CC-------CCCCCceeEEEEecCCCCCchhHhH
Q 030407 73 KADLLLCESGGDNL----AANFSRELADYIIYIIDVSGGDKIPR--KG-------GPGITQADLLVINKTDLASAIGADL 139 (178)
Q Consensus 73 ~~d~iiiEttG~~~----~~~~~~~~ad~~I~VvD~~~~~~~~~--~~-------~~qi~~adiiviNK~Dl~~~~~~~~ 139 (178)
.+.+-++++.|..- ...+. ..++++++|+|.+....... .+ ...-..+-++|.||+|+........
T Consensus 53 ~~~l~~~d~~g~~~~~~~~~~~~-~~~~~~i~v~d~~~~~s~~~~~~~~~~i~~~~~~~~~p~ilvgnK~Dl~~~~~~~~ 131 (173)
T d2fn4a1 53 PARLDILDTAGQEEFGAMREQYM-RAGHGFLLVFAINDRQSFNEVGKLFTQILRVKDRDDFPVVLVGNKADLESQRQVPR 131 (173)
T ss_dssp EEEEEEEECCCTTTTSCCHHHHH-HHCSEEEEEEETTCHHHHHHHHHHHHHHHHHHTSSCCCEEEEEECGGGGGGCCSCH
T ss_pred eeeeeccccccccccccccchhh-ccceeeeeecccccccccchhhhhhHHHHHHhccCCCceEEEEEeechhhccccch
Confidence 46778889999311 11121 24799999999987542211 00 0111335689999999865421223
Q ss_pred HHHHHHHHhcCCCCCEEEEecccCCCHHHHHHHHhhh
Q 030407 140 AVMERDALRMRDGGPFIFAQVGWVIGIIFTLSITHYI 176 (178)
Q Consensus 140 ~~~~~~l~~~np~a~i~~~SA~~g~gi~el~~~l~~~ 176 (178)
+...+..+.. +.++++|||++|+||+++|+.|.+.
T Consensus 132 ~~~~~~~~~~--~~~~~e~Sak~g~gv~e~f~~l~~~ 166 (173)
T d2fn4a1 132 SEASAFGASH--HVAYFEASAKLRLNVDEAFEQLVRA 166 (173)
T ss_dssp HHHHHHHHHT--TCEEEECBTTTTBSHHHHHHHHHHH
T ss_pred hhhhHHHHhc--CCEEEEEeCCCCcCHHHHHHHHHHH
Confidence 4455555544 4689999999999999999987653
No 39
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.48 E-value=3.2e-08 Score=71.18 Aligned_cols=100 Identities=14% Similarity=0.022 Sum_probs=64.9
Q ss_pred CCCEEEEeCCcchh----hhcccccccceEEEEEeCCCCCCCCc---------CCCCCCCceeEEEEecCCCCCchhHhH
Q 030407 73 KADLLLCESGGDNL----AANFSRELADYIIYIIDVSGGDKIPR---------KGGPGITQADLLVINKTDLASAIGADL 139 (178)
Q Consensus 73 ~~d~iiiEttG~~~----~~~~~~~~ad~~I~VvD~~~~~~~~~---------~~~~qi~~adiiviNK~Dl~~~~~~~~ 139 (178)
.+.+-+.++.|..- ...+. ..+|.+++|+|.++...... .....-..+-++|.||+|+..+.....
T Consensus 51 ~~~l~i~d~~g~~~~~~~~~~~~-~~~d~~ilv~d~~~~~s~~~~~~~~~~i~~~~~~~~~piilvgnK~Dl~~~r~v~~ 129 (167)
T d1xtqa1 51 EYHLQLVDTAGQDEYSIFPQTYS-IDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKKDLHMERVISY 129 (167)
T ss_dssp EEEEEEEECCCCCTTCCCCGGGT-SSCCEEEEEEETTCHHHHHHHHHHHHHHHHHHCSSCCCEEEEEECTTCGGGCCSCH
T ss_pred EEEeeecccccccccccccchhh-hhhhhhhhhcccchhhhhhhhhhhhhhhhhcccccccceeeeccccccccccchhH
Confidence 46677888888321 11222 24799999999987543211 001112346689999999965411223
Q ss_pred HHHHHHHHhcCCCCCEEEEecccCCCHHHHHHHHhh
Q 030407 140 AVMERDALRMRDGGPFIFAQVGWVIGIIFTLSITHY 175 (178)
Q Consensus 140 ~~~~~~l~~~np~a~i~~~SA~~g~gi~el~~~l~~ 175 (178)
+..+++.++.+ .+++++||++|+||+++|+.|.+
T Consensus 130 ~~~~~~a~~~~--~~~~e~Sak~~~~v~~~f~~li~ 163 (167)
T d1xtqa1 130 EEGKALAESWN--AAFLESSAKENQTAVDVFRRIIL 163 (167)
T ss_dssp HHHHHHHHHHT--CEEEECCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcC--CEEEEEecCCCCCHHHHHHHHHH
Confidence 45555666553 58999999999999999997654
No 40
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.47 E-value=1.3e-07 Score=69.28 Aligned_cols=101 Identities=13% Similarity=0.047 Sum_probs=63.1
Q ss_pred CCCEEEEeCCcch----hhhcccccccceEEEEEeCCCCCCCCc---CCCC-----CCCceeEEEEecCCCCCchh----
Q 030407 73 KADLLLCESGGDN----LAANFSRELADYIIYIIDVSGGDKIPR---KGGP-----GITQADLLVINKTDLASAIG---- 136 (178)
Q Consensus 73 ~~d~iiiEttG~~----~~~~~~~~~ad~~I~VvD~~~~~~~~~---~~~~-----qi~~adiiviNK~Dl~~~~~---- 136 (178)
.+.+-++++.|.. +...+ ...+|++++|+|+++...... .+.. .-..+-++|.||+|+.+...
T Consensus 56 ~~~l~i~D~~g~e~~~~~~~~~-~~~a~~~ilv~d~t~~~Sf~~~~~~~~~~~~~~~~~~~~ilvgnK~Dl~~~~~~~~~ 134 (185)
T d2atxa1 56 QYLLGLYDTAGQEDYDRLRPLS-YPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLAR 134 (185)
T ss_dssp EEEEEEECCCCSSSSTTTGGGG-CTTCSEEEEEEETTCHHHHHHHHHTHHHHHHHHSTTCCEEEEEECTTSTTCHHHHHH
T ss_pred eEEeecccccccchhhhhhhhc-ccccceeeeccccchHHHHHHHHHHHHHHHHhcCCCCCeeEeeeccccccchhhhhh
Confidence 4667789999931 11222 235799999999987543211 1000 11235689999999976410
Q ss_pred --------HhHHHHHHHHHhcCCCCCEEEEecccCCCHHHHHHHHhh
Q 030407 137 --------ADLAVMERDALRMRDGGPFIFAQVGWVIGIIFTLSITHY 175 (178)
Q Consensus 137 --------~~~~~~~~~l~~~np~a~i~~~SA~~g~gi~el~~~l~~ 175 (178)
...++..+..++.+ ..++++|||++|+||+++|+.+.+
T Consensus 135 ~~~~~~r~v~~~~~~~~a~~~~-~~~~~E~SAk~~~gv~e~F~~li~ 180 (185)
T d2atxa1 135 LNDMKEKPICVEQGQKLAKEIG-ACCYVECSALTQKGLKTVFDEAII 180 (185)
T ss_dssp HTTTTCCCCCHHHHHHHHHHHT-CSCEEECCTTTCTTHHHHHHHHHH
T ss_pred hhhcccccccHHHHHHHHHHcC-CCEEEEecCCCCcCHHHHHHHHHH
Confidence 01223344444443 358899999999999999997654
No 41
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.44 E-value=7.4e-08 Score=69.24 Aligned_cols=102 Identities=11% Similarity=0.003 Sum_probs=65.3
Q ss_pred CCCEEEEeCCcch----hhhcccccccceEEEEEeCCCCCCCCc---CC------CCCCCceeEEEEecCCCCCchhHhH
Q 030407 73 KADLLLCESGGDN----LAANFSRELADYIIYIIDVSGGDKIPR---KG------GPGITQADLLVINKTDLASAIGADL 139 (178)
Q Consensus 73 ~~d~iiiEttG~~----~~~~~~~~~ad~~I~VvD~~~~~~~~~---~~------~~qi~~adiiviNK~Dl~~~~~~~~ 139 (178)
...+-+.++.|.. +...+. ..+|++++++|.++...... .+ ...-..+-++|.||+|+........
T Consensus 50 ~~~~~~~d~~g~~~~~~~~~~~~-~~~~~~ilv~d~~~~~sf~~~~~~~~~~~~~~~~~~~p~ilvgnK~Dl~~~~~~~~ 128 (167)
T d1c1ya_ 50 QCMLEILDTAGTEQFTAMRDLYM-KNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEDERVVGK 128 (167)
T ss_dssp EEEEEEEEECSSCSSTTHHHHHH-HHCSEEEEEEETTCHHHHHTHHHHHHHHHHHHCCSCCCEEEEEECTTCGGGCCSCH
T ss_pred EEEeccccccCcccccccccccc-cccceeEEeeeccchhhhHhHHHHHHHHHHhcCCCCCeEEEEEEecCcccccccch
Confidence 4677788888831 112222 24799999999987532211 00 0011235699999999975422233
Q ss_pred HHHHHHHHhcCCCCCEEEEecccCCCHHHHHHHHhhh
Q 030407 140 AVMERDALRMRDGGPFIFAQVGWVIGIIFTLSITHYI 176 (178)
Q Consensus 140 ~~~~~~l~~~np~a~i~~~SA~~g~gi~el~~~l~~~ 176 (178)
+......++. ...+++++||++|+||+++|+.|.+.
T Consensus 129 ~~~~~~~~~~-~~~~~~e~Sak~g~gv~e~F~~l~~~ 164 (167)
T d1c1ya_ 129 EQGQNLARQW-CNCAFLESSAKSKINVNEIFYDLVRQ 164 (167)
T ss_dssp HHHHHHHHHT-TSCEEEECBTTTTBSHHHHHHHHHHH
T ss_pred hHHHHHHHHh-CCCEEEEEcCCCCcCHHHHHHHHHHH
Confidence 4444444443 45789999999999999999987654
No 42
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.43 E-value=1.8e-07 Score=67.39 Aligned_cols=100 Identities=16% Similarity=0.131 Sum_probs=65.7
Q ss_pred CCCEEEEeCCcch----hhhcccccccceEEEEEeCCCCCCCCc--C------CCCCCCceeEEEEecCCCCCchhHhHH
Q 030407 73 KADLLLCESGGDN----LAANFSRELADYIIYIIDVSGGDKIPR--K------GGPGITQADLLVINKTDLASAIGADLA 140 (178)
Q Consensus 73 ~~d~iiiEttG~~----~~~~~~~~~ad~~I~VvD~~~~~~~~~--~------~~~qi~~adiiviNK~Dl~~~~~~~~~ 140 (178)
.+.+-|++|.|.. +...+ ...+|.+++++|.++...... . ....-..+-+++.||.|+........+
T Consensus 55 ~~~l~i~Dt~G~e~~~~~~~~~-~~~~d~~i~v~d~~~~~s~~~~~~~~~~~~~~~~~~~~iilv~~k~d~~~~~~v~~~ 133 (170)
T d2g6ba1 55 KVKLQMWDTAGQERFRSVTHAY-YRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKVDSAHERVVKRE 133 (170)
T ss_dssp EEEEEEEECCCC--------CC-GGGCSEEEEEEETTCHHHHHTHHHHHHHHHHHSCTTCEEEEEEECCSTTSCCCSCHH
T ss_pred EEEEEEEECCCchhhHHHHHHh-hcCCceeEEEecCCcccchhhhhhhhhhhhhccCCCceEEEEEeeechhhcccccHH
Confidence 3567788999931 11122 235799999999976542211 0 001123467889999999875323345
Q ss_pred HHHHHHHhcCCCCCEEEEecccCCCHHHHHHHHhh
Q 030407 141 VMERDALRMRDGGPFIFAQVGWVIGIIFTLSITHY 175 (178)
Q Consensus 141 ~~~~~l~~~np~a~i~~~SA~~g~gi~el~~~l~~ 175 (178)
+..+..+..+ .+++++||++|+||+++|+.|.+
T Consensus 134 ~~~~~~~~~~--~~~~e~Sak~g~gi~e~f~~l~~ 166 (170)
T d2g6ba1 134 DGEKLAKEYG--LPFMETSAKTGLNVDLAFTAIAK 166 (170)
T ss_dssp HHHHHHHHHT--CCEEECCTTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHcC--CEEEEEeCCCCcCHHHHHHHHHH
Confidence 5566666553 69999999999999999998764
No 43
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.42 E-value=4.1e-08 Score=70.55 Aligned_cols=102 Identities=13% Similarity=-0.004 Sum_probs=64.8
Q ss_pred CCCEEEEeCCcchhh---hcccccccceEEEEEeCCCCCCCCc---------CCCCCCCceeEEEEecCCCCCchhHhHH
Q 030407 73 KADLLLCESGGDNLA---ANFSRELADYIIYIIDVSGGDKIPR---------KGGPGITQADLLVINKTDLASAIGADLA 140 (178)
Q Consensus 73 ~~d~iiiEttG~~~~---~~~~~~~ad~~I~VvD~~~~~~~~~---------~~~~qi~~adiiviNK~Dl~~~~~~~~~ 140 (178)
...+-++++.|.... .......++.+++++|.++...... .....-..+-++|.||+|+.+......+
T Consensus 50 ~~~l~~~d~~g~~~~~~~~~~~~~~a~~~ilv~d~~~~~s~~~~~~~~~~~~~~~~~~~~piilvgnK~Dl~~~~~~~~~ 129 (167)
T d1kaoa_ 50 PSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYEKVPVILVGNKVDLESEREVSSS 129 (167)
T ss_dssp EEEEEEEECCCTTCCHHHHHHHHHHCSEEEEEEETTCHHHHHHHHHHHHHHHHHTTTSCCCEEEEEECGGGGGGCCSCHH
T ss_pred eEeeccccCCCccccccchHHHhhcccceeeeeeecchhhhhhhhchhhhhhhhccCCCCCEEEEEEccchhhcccchHH
Confidence 467778888883211 1111224799999999986432211 0011123456899999998754212334
Q ss_pred HHHHHHHhcCCCCCEEEEecccCCCHHHHHHHHhhh
Q 030407 141 VMERDALRMRDGGPFIFAQVGWVIGIIFTLSITHYI 176 (178)
Q Consensus 141 ~~~~~l~~~np~a~i~~~SA~~g~gi~el~~~l~~~ 176 (178)
+.....++.+ .+++++||++|+||+++|+.+.+.
T Consensus 130 ~~~~~~~~~~--~~~~e~Sak~g~~i~e~f~~i~~~ 163 (167)
T d1kaoa_ 130 EGRALAEEWG--CPFMETSAKSKTMVDELFAEIVRQ 163 (167)
T ss_dssp HHHHHHHHHT--SCEEEECTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcC--CeEEEECCCCCcCHHHHHHHHHHH
Confidence 4455555543 589999999999999999987653
No 44
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.41 E-value=7.8e-08 Score=69.78 Aligned_cols=102 Identities=18% Similarity=0.123 Sum_probs=63.8
Q ss_pred CCCEEEEeCCcch----hhhcccccccceEEEEEeCCCCCCCCc---CCCCC-----CCceeEEEEecCCCCCchhH---
Q 030407 73 KADLLLCESGGDN----LAANFSRELADYIIYIIDVSGGDKIPR---KGGPG-----ITQADLLVINKTDLASAIGA--- 137 (178)
Q Consensus 73 ~~d~iiiEttG~~----~~~~~~~~~ad~~I~VvD~~~~~~~~~---~~~~q-----i~~adiiviNK~Dl~~~~~~--- 137 (178)
.+.+-+.++.|.. +...+. ..+|.+++|+|.++...... .+... -..+-++|.||+|+.+....
T Consensus 49 ~~~l~i~D~~g~~~~~~~~~~~~-~~~~~~ilv~d~~~~~Sf~~~~~~~~~~~~~~~~~~piilvgnK~Dl~~~~~~~~~ 127 (177)
T d1kmqa_ 49 QVELALWDTAGLEDYDRLRPLSY-PDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRE 127 (177)
T ss_dssp EEEEEEEEECCSGGGTTTGGGGC-TTCSEEEEEEETTCHHHHHHHHHTHHHHHHHHSTTSCEEEEEECGGGTTCHHHHHH
T ss_pred ceeeeccccCccchhcccchhhc-ccchhhhhhcccchhHHHHHHHHHHHHHHHHhCCCCceEEeeecccccchhhHHHH
Confidence 4678889999932 112222 35799999999987542211 11000 12456899999999765110
Q ss_pred ---------hHHHHHHHHHhcCCCCCEEEEecccCCCHHHHHHHHhhh
Q 030407 138 ---------DLAVMERDALRMRDGGPFIFAQVGWVIGIIFTLSITHYI 176 (178)
Q Consensus 138 ---------~~~~~~~~l~~~np~a~i~~~SA~~g~gi~el~~~l~~~ 176 (178)
..++..++.++. ...++++|||++|+||+++|+.+.+.
T Consensus 128 ~~~~~~~~v~~~e~~~~a~~~-~~~~~~E~SAkt~~gi~e~F~~i~~~ 174 (177)
T d1kmqa_ 128 LAKMKQEPVKPEEGRDMANRI-GAFGYMECSAKTKDGVREVFEMATRA 174 (177)
T ss_dssp HHHTTCCCCCHHHHHHHHHHT-TCSEEEECCTTTCTTHHHHHHHHHHH
T ss_pred HHHhhcccccHHHHHHHHHHc-CCcEEEEecCCCCcCHHHHHHHHHHH
Confidence 112233344433 23589999999999999999987664
No 45
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.40 E-value=8.8e-08 Score=69.02 Aligned_cols=101 Identities=16% Similarity=0.106 Sum_probs=64.9
Q ss_pred CCCEEEEeCCcch----hhhcccccccceEEEEEeCCCCCCCCc--CC------CCCCCceeEEEEecCCCCCchhHhHH
Q 030407 73 KADLLLCESGGDN----LAANFSRELADYIIYIIDVSGGDKIPR--KG------GPGITQADLLVINKTDLASAIGADLA 140 (178)
Q Consensus 73 ~~d~iiiEttG~~----~~~~~~~~~ad~~I~VvD~~~~~~~~~--~~------~~qi~~adiiviNK~Dl~~~~~~~~~ 140 (178)
.+.+.++.+.|.. +...+. ..++.+++++|.++...... .+ ...-..+-++|.||+|+..+.....+
T Consensus 54 ~~~~~~~d~~g~~~~~~~~~~~~-~~~~~~ilv~d~~~~~s~~~~~~~~~~~~~~~~~~~~iilvgnK~Dl~~~~~v~~e 132 (170)
T d1r2qa_ 54 TVKFEIWDTAGQERYHSLAPMYY-RGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQ 132 (170)
T ss_dssp EEEEEEEEECCSGGGGGGHHHHH-TTCSEEEEEEETTCHHHHHHHHHHHHHHHHHSCTTCEEEEEEECGGGGGGCCSCHH
T ss_pred EEEEEeccCCCchhhhhhHHHHh-hCcceEEEEeccchhhHHHHHHHHhhhhhhccCCCceEEeecccccccccccccHH
Confidence 4677888888832 111222 25799999999877542211 00 00113456899999998654222344
Q ss_pred HHHHHHHhcCCCCCEEEEecccCCCHHHHHHHHhhh
Q 030407 141 VMERDALRMRDGGPFIFAQVGWVIGIIFTLSITHYI 176 (178)
Q Consensus 141 ~~~~~l~~~np~a~i~~~SA~~g~gi~el~~~l~~~ 176 (178)
..++..+.. ..+++++||++|+||+++|+.|.+.
T Consensus 133 ~~~~~~~~~--~~~~~e~SAk~g~~V~e~f~~l~~~ 166 (170)
T d1r2qa_ 133 EAQSYADDN--SLLFMETSAKTSMNVNEIFMAIAKK 166 (170)
T ss_dssp HHHHHHHHT--TCEEEECCTTTCTTHHHHHHHHHHT
T ss_pred HHHHHHHhc--CCEEEEeeCCCCCCHHHHHHHHHHH
Confidence 555555544 4689999999999999999987543
No 46
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.40 E-value=1.4e-07 Score=68.12 Aligned_cols=100 Identities=12% Similarity=0.026 Sum_probs=64.0
Q ss_pred CCCEEEEeCCcch----hhhcccccccceEEEEEeCCCCCCCCc--C-C-----CCCCCceeEEEEecCCCCCchhHhHH
Q 030407 73 KADLLLCESGGDN----LAANFSRELADYIIYIIDVSGGDKIPR--K-G-----GPGITQADLLVINKTDLASAIGADLA 140 (178)
Q Consensus 73 ~~d~iiiEttG~~----~~~~~~~~~ad~~I~VvD~~~~~~~~~--~-~-----~~qi~~adiiviNK~Dl~~~~~~~~~ 140 (178)
...+.++++.|.. +...+. ..++++++++|.++...... . . ...-..+-++|.||+|+.+......+
T Consensus 53 ~~~~~i~D~~G~~~~~~~~~~~~-~~~~~~i~v~d~~~~~s~~~~~~~~~~~~~~~~~~~piivv~nK~D~~~~~~~~~~ 131 (174)
T d2bmea1 53 YVKLQIWDTAGQERFRSVTRSYY-RGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDADREVTFL 131 (174)
T ss_dssp EEEEEEEEECCSGGGHHHHHTTS-TTCSEEEEEEETTCHHHHHTHHHHHHHHHHHSCTTCEEEEEEECGGGGGGCCSCHH
T ss_pred ceeEEEEECCCchhhhhhHHHHh-hhCCEEEEEEecccchhHHHHhhhhcccccccCCceEEEEEEecccccchhchhhh
Confidence 4567889999931 112222 25799999999986532211 0 0 01123567999999998654212223
Q ss_pred HHHHHHHhcCCCCCEEEEecccCCCHHHHHHHHhh
Q 030407 141 VMERDALRMRDGGPFIFAQVGWVIGIIFTLSITHY 175 (178)
Q Consensus 141 ~~~~~l~~~np~a~i~~~SA~~g~gi~el~~~l~~ 175 (178)
...+..+.. ..+++++||++|+||+++|+.+.+
T Consensus 132 ~~~~~~~~~--~~~~~e~Sak~~~gi~e~f~~l~~ 164 (174)
T d2bmea1 132 EASRFAQEN--ELMFLETSALTGENVEEAFVQCAR 164 (174)
T ss_dssp HHHHHHHHT--TCEEEECCTTTCTTHHHHHHHHHH
T ss_pred HHHHHHHhC--CCEEEEeeCCCCcCHHHHHHHHHH
Confidence 444444443 468999999999999999987644
No 47
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.40 E-value=7.6e-08 Score=69.40 Aligned_cols=100 Identities=13% Similarity=0.057 Sum_probs=64.6
Q ss_pred CCCEEEEeCCcchhh---hcccccccceEEEEEeCCCCCCCCc--C-------CCCCCCceeEEEEecCCCCCchhHhHH
Q 030407 73 KADLLLCESGGDNLA---ANFSRELADYIIYIIDVSGGDKIPR--K-------GGPGITQADLLVINKTDLASAIGADLA 140 (178)
Q Consensus 73 ~~d~iiiEttG~~~~---~~~~~~~ad~~I~VvD~~~~~~~~~--~-------~~~qi~~adiiviNK~Dl~~~~~~~~~ 140 (178)
.+.+-++++.|.... ..+. ..++++++|+|.++...... . ....-..+-++|.||+|+.++.....+
T Consensus 49 ~~~l~i~D~~g~~~~~~~~~~~-~~~~~~ilv~d~~~~~s~~~~~~~~~~~~~~~~~~~~piilvgnK~Dl~~~r~V~~~ 127 (168)
T d2atva1 49 VVSMEILDTAGQEDTIQREGHM-RWGEGFVLVYDITDRGSFEEVLPLKNILDEIKKPKNVTLILVGNKADLDHSRQVSTE 127 (168)
T ss_dssp EEEEEEEECCCCCCCHHHHHHH-HHCSEEEEEEETTCHHHHHTHHHHHHHHHHHHTTSCCCEEEEEECGGGGGGCCSCHH
T ss_pred ceEEEEeecccccccccchhhh-cccccceeecccCCccchhhhhhhcccccccccccCcceeeeccchhhhhhccCcHH
Confidence 467889999994211 1122 24799999999987532211 0 011123467999999999643112334
Q ss_pred HHHHHHHhcCCCCCEEEEecccCCC-HHHHHHHHhh
Q 030407 141 VMERDALRMRDGGPFIFAQVGWVIG-IIFTLSITHY 175 (178)
Q Consensus 141 ~~~~~l~~~np~a~i~~~SA~~g~g-i~el~~~l~~ 175 (178)
+..+..++.+ .++++|||++|+| |+++|..+.+
T Consensus 128 e~~~~a~~~~--~~~~e~Saktg~gnV~e~F~~l~~ 161 (168)
T d2atva1 128 EGEKLATELA--CAFYECSACTGEGNITEIFYELCR 161 (168)
T ss_dssp HHHHHHHHHT--SEEEECCTTTCTTCHHHHHHHHHH
T ss_pred HHHHHHHHhC--CeEEEEccccCCcCHHHHHHHHHH
Confidence 5555556553 5899999999996 9999987654
No 48
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.38 E-value=4.6e-07 Score=65.58 Aligned_cols=99 Identities=20% Similarity=0.134 Sum_probs=65.4
Q ss_pred CCCEEEEeCCcchh----hhcccccccceEEEEEeCCCCCCCCc---------CCCCCCCceeEEEEecCCCCCchhHhH
Q 030407 73 KADLLLCESGGDNL----AANFSRELADYIIYIIDVSGGDKIPR---------KGGPGITQADLLVINKTDLASAIGADL 139 (178)
Q Consensus 73 ~~d~iiiEttG~~~----~~~~~~~~ad~~I~VvD~~~~~~~~~---------~~~~qi~~adiiviNK~Dl~~~~~~~~ 139 (178)
.+.+.+++|.|..- ...+. ..+|++++|+|.++...... ........+-+++.||.|..... ...
T Consensus 55 ~~~~~i~Dt~G~~~~~~~~~~~~-~~~~~ii~v~d~~~~~s~~~~~~~~~~i~~~~~~~~~~i~~~~nk~d~~~~~-v~~ 132 (177)
T d1x3sa1 55 KAKLAIWDTAGQERFRTLTPSYY-RGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKENRE-VDR 132 (177)
T ss_dssp EEEEEEEEECSSGGGCCSHHHHH-TTCCEEEEEEETTCHHHHHTHHHHHHHHTTCCSCSCCEEEEEEECTTSSSCC-SCH
T ss_pred ccEEEEEECCCchhhHHHHHHHH-hcCCEEEEEEECCCccccccchhhhhhhcccccccceeeEEEeecccccccc-ccH
Confidence 46788899999321 11111 24699999999876432111 11222345668999999987542 333
Q ss_pred HHHHHHHHhcCCCCCEEEEecccCCCHHHHHHHHhh
Q 030407 140 AVMERDALRMRDGGPFIFAQVGWVIGIIFTLSITHY 175 (178)
Q Consensus 140 ~~~~~~l~~~np~a~i~~~SA~~g~gi~el~~~l~~ 175 (178)
+...+..+..+ .+++++||++|+|++++|+++.+
T Consensus 133 ~~~~~~~~~~~--~~~~e~Sa~tg~gv~e~f~~l~~ 166 (177)
T d1x3sa1 133 NEGLKFARKHS--MLFIEASAKTCDGVQCAFEELVE 166 (177)
T ss_dssp HHHHHHHHHTT--CEEEECCTTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHCC--CEEEEEeCCCCCCHHHHHHHHHH
Confidence 45555666543 58999999999999999987654
No 49
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.37 E-value=2e-07 Score=66.84 Aligned_cols=100 Identities=14% Similarity=0.073 Sum_probs=63.3
Q ss_pred CCCEEEEeCCcchhh---hcccccccceEEEEEeCCCCCCCCc--CCC-------CCCCceeEEEEecCCCCCchhHhHH
Q 030407 73 KADLLLCESGGDNLA---ANFSRELADYIIYIIDVSGGDKIPR--KGG-------PGITQADLLVINKTDLASAIGADLA 140 (178)
Q Consensus 73 ~~d~iiiEttG~~~~---~~~~~~~ad~~I~VvD~~~~~~~~~--~~~-------~qi~~adiiviNK~Dl~~~~~~~~~ 140 (178)
.+.+-+.++.|.... .+.....++.+++|+|.++...... .+. .--..+-++|.||+|+.... ...+
T Consensus 50 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~iiv~d~~~~~s~~~~~~~~~~i~~~~~~~~~piilv~nK~Dl~~~~-~~~~ 128 (166)
T d1ctqa_ 50 TCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAART-VESR 128 (166)
T ss_dssp EEEEEEEEECCCGGGHHHHHHHHHHCSEEEEEEETTCHHHHHTHHHHHHHHHHHHTCSSCCEEEEEECTTCSCCC-SCHH
T ss_pred eeeeeeeeccCccccccchhhhhhcccccceeecccccccHHHHHHHHHHHHHhcCCCCCeEEEEeccccccccc-ccHH
Confidence 356777788883211 1111224689999999976532211 000 00123579999999997642 2334
Q ss_pred HHHHHHHhcCCCCCEEEEecccCCCHHHHHHHHhh
Q 030407 141 VMERDALRMRDGGPFIFAQVGWVIGIIFTLSITHY 175 (178)
Q Consensus 141 ~~~~~l~~~np~a~i~~~SA~~g~gi~el~~~l~~ 175 (178)
...++.+.. +.+++++||++|+||+++|+.+.+
T Consensus 129 ~~~~~~~~~--~~~~~e~Sak~g~gi~e~f~~i~~ 161 (166)
T d1ctqa_ 129 QAQDLARSY--GIPYIETSAKTRQGVEDAFYTLVR 161 (166)
T ss_dssp HHHHHHHHH--TCCEEECCTTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHh--CCeEEEEcCCCCcCHHHHHHHHHH
Confidence 555555554 358999999999999999987754
No 50
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
Probab=98.35 E-value=6.1e-07 Score=62.84 Aligned_cols=103 Identities=13% Similarity=0.065 Sum_probs=65.1
Q ss_pred CCCCEEEEeCCcchhhh---cccccccceEEEEEeCCCCCCCCc---------CCCCCCCceeEEEEecCCCCCchhHhH
Q 030407 72 FKADLLLCESGGDNLAA---NFSRELADYIIYIIDVSGGDKIPR---------KGGPGITQADLLVINKTDLASAIGADL 139 (178)
Q Consensus 72 ~~~d~iiiEttG~~~~~---~~~~~~ad~~I~VvD~~~~~~~~~---------~~~~qi~~adiiviNK~Dl~~~~~~~~ 139 (178)
....+.+.++.|..... ......++.+++++|..+...... .....-..+-+++.||.|+.+. ...
T Consensus 42 ~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~k~d~~~~--~~~ 119 (160)
T d1r8sa_ 42 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNA--MNA 119 (160)
T ss_dssp SSCEEEEEECCCCGGGHHHHHHHTTTCSEEEEEEETTCGGGHHHHHHHHHHHHTCGGGTTCEEEEEEECTTSTTC--CCH
T ss_pred eeEEEEEecCCCcccchhhhhhhhccceeEEEEEEecChHHHHHHHHHHHHHHHhhcccCceEEEEeeccccccc--ccH
Confidence 46788889999942211 111224689999999876432211 0011123456899999999876 333
Q ss_pred HHHHHHHHhc---CCCCCEEEEecccCCCHHHHHHHHhhh
Q 030407 140 AVMERDALRM---RDGGPFIFAQVGWVIGIIFTLSITHYI 176 (178)
Q Consensus 140 ~~~~~~l~~~---np~a~i~~~SA~~g~gi~el~~~l~~~ 176 (178)
.++....... ....+++++||++|+||+++|++|.+.
T Consensus 120 ~~i~~~~~~~~~~~~~~~~~~~SAktg~gi~e~~~~l~~~ 159 (160)
T d1r8sa_ 120 AEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQ 159 (160)
T ss_dssp HHHHHHTTGGGCSSCCEEEEECBTTTTBTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCEEEEeECCCCCCHHHHHHHHHhc
Confidence 3433332211 234689999999999999999998753
No 51
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.35 E-value=7.5e-07 Score=64.16 Aligned_cols=101 Identities=7% Similarity=-0.010 Sum_probs=64.1
Q ss_pred CCCEEEEeCCcchhh---hcccccccceEEEEEeCCCCCCCCc--CC----------CCCCCceeEEEEecCCCCCchhH
Q 030407 73 KADLLLCESGGDNLA---ANFSRELADYIIYIIDVSGGDKIPR--KG----------GPGITQADLLVINKTDLASAIGA 137 (178)
Q Consensus 73 ~~d~iiiEttG~~~~---~~~~~~~ad~~I~VvD~~~~~~~~~--~~----------~~qi~~adiiviNK~Dl~~~~~~ 137 (178)
.+.+-+.++.|..-. .+.....++.+++++|.+....... .+ ...-..+-++|.||+|+.+.. .
T Consensus 54 ~~~~~i~d~~g~~~~~~~~~~~~~~~~~~i~~~d~~~~~s~~~~~~~~~~i~~~~~~~~~~~~piilVgnK~Dl~~~~-v 132 (174)
T d1wmsa_ 54 FVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKIDISERQ-V 132 (174)
T ss_dssp EEEEEEEECCCCGGGHHHHGGGGTTCSEEEEEEETTCHHHHHTHHHHHHHHHHHHTCSCTTTSCEEEEEECTTCSSCS-S
T ss_pred eeeEeeecccCcceehhhhhhhhhccceEEEEEeeecccccchhhhHHHHHHHHhccccCCCceEEEeccccchhhcc-C
Confidence 456678888883211 1222234699999999976432110 00 001124579999999997531 2
Q ss_pred hHHHHHHHHHhcCCCCCEEEEecccCCCHHHHHHHHhh
Q 030407 138 DLAVMERDALRMRDGGPFIFAQVGWVIGIIFTLSITHY 175 (178)
Q Consensus 138 ~~~~~~~~l~~~np~a~i~~~SA~~g~gi~el~~~l~~ 175 (178)
..+..+++.++. ...++++|||++|+||+++|+.+.+
T Consensus 133 ~~~~~~~~~~~~-~~~~~~e~Sak~~~gI~e~f~~l~~ 169 (174)
T d1wmsa_ 133 STEEAQAWCRDN-GDYPYFETSAKDATNVAAAFEEAVR 169 (174)
T ss_dssp CHHHHHHHHHHT-TCCCEEECCTTTCTTHHHHHHHHHH
T ss_pred cHHHHHHHHHHc-CCCeEEEEcCCCCcCHHHHHHHHHH
Confidence 344556666654 3468999999999999999987643
No 52
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.34 E-value=3.2e-07 Score=67.57 Aligned_cols=100 Identities=18% Similarity=0.126 Sum_probs=65.0
Q ss_pred CCCEEEEeCCcch----hhhcccccccceEEEEEeCCCCCCCCc--C------CCCCCCceeEEEEecCCCCCchhHhHH
Q 030407 73 KADLLLCESGGDN----LAANFSRELADYIIYIIDVSGGDKIPR--K------GGPGITQADLLVINKTDLASAIGADLA 140 (178)
Q Consensus 73 ~~d~iiiEttG~~----~~~~~~~~~ad~~I~VvD~~~~~~~~~--~------~~~qi~~adiiviNK~Dl~~~~~~~~~ 140 (178)
.+.+-+++|.|.. +...+. ..++++|+|+|++....... . ....-..+-++|.||+|+.+......+
T Consensus 54 ~~~l~i~Dt~G~e~~~~~~~~~~-~~a~~~i~v~d~t~~~s~~~~~~~~~~~~~~~~~~~~iilv~nK~D~~~~~~~~~~ 132 (194)
T d2bcgy1 54 TVKLQIWDTAGQERFRTITSSYY-RGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKCDLKDKRVVEYD 132 (194)
T ss_dssp EEEEEEECCTTTTTTTCCCGGGG-TTCSEEEEEEETTCHHHHHHHHHHHHHHHHHSCTTCEEEEEEECTTCTTTCCSCHH
T ss_pred EEEEEEEECCCchhhHHHHHHHh-ccCCEEEEEEeCcchhhhhhHhhhhhhhhhcccCCceEEEEEeccccccccchhHH
Confidence 5678888999931 112222 25799999999976432211 0 001123356999999999865323334
Q ss_pred HHHHHHHhcCCCCCEEEEecccCCCHHHHHHHHhh
Q 030407 141 VMERDALRMRDGGPFIFAQVGWVIGIIFTLSITHY 175 (178)
Q Consensus 141 ~~~~~l~~~np~a~i~~~SA~~g~gi~el~~~l~~ 175 (178)
......+.. ..+++++||++|.||+++|+.+.+
T Consensus 133 ~~~~~~~~~--~~~~~e~SAk~g~gi~e~f~~l~~ 165 (194)
T d2bcgy1 133 VAKEFADAN--KMPFLETSALDSTNVEDAFLTMAR 165 (194)
T ss_dssp HHHHHHHHT--TCCEEECCTTTCTTHHHHHHHHHH
T ss_pred HHhhhhhcc--CcceEEEecCcCccHHHHHHHHHH
Confidence 444444443 468999999999999999998754
No 53
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.34 E-value=2.2e-07 Score=66.33 Aligned_cols=100 Identities=14% Similarity=0.090 Sum_probs=63.8
Q ss_pred CCCEEEEeCCcchhh----hcccccccceEEEEEeCCCCCCCCc---------CCCCCCCceeEEEEecCCCCCchhHhH
Q 030407 73 KADLLLCESGGDNLA----ANFSRELADYIIYIIDVSGGDKIPR---------KGGPGITQADLLVINKTDLASAIGADL 139 (178)
Q Consensus 73 ~~d~iiiEttG~~~~----~~~~~~~ad~~I~VvD~~~~~~~~~---------~~~~qi~~adiiviNK~Dl~~~~~~~~ 139 (178)
.+.+.+..+.|.... .......+|++++|+|.++...... ++...-..+-++|.||+|+.++.....
T Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ilv~d~~~~~s~~~~~~~~~~i~~~~~~~~~pi~lvgnK~Dl~~~~~v~~ 129 (165)
T d1z06a1 50 RIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLANDIPRILVGNKCDLRSAIQVPT 129 (165)
T ss_dssp EEEEEEEECCCSHHHHTTTHHHHHTTCCEEEEEEETTCHHHHHTHHHHHHHHHHHCCCSCCCEEEEEECTTCGGGCCSCH
T ss_pred ceEEEEEeccCchhhccccceeeecCCCceEEEEEeehhhhhhhhhhhhHHHHhhccCCCCeEEEEeccccchhccchhH
Confidence 467778888883211 1111235799999999987532211 011111345789999999965421234
Q ss_pred HHHHHHHHhcCCCCCEEEEeccc---CCCHHHHHHHHh
Q 030407 140 AVMERDALRMRDGGPFIFAQVGW---VIGIIFTLSITH 174 (178)
Q Consensus 140 ~~~~~~l~~~np~a~i~~~SA~~---g~gi~el~~~l~ 174 (178)
+..+++.++. +.+++++|||+ |+||+++|+.|.
T Consensus 130 ~~~~~~~~~~--~~~~~e~SAkt~~~~~~V~e~F~~lA 165 (165)
T d1z06a1 130 DLAQKFADTH--SMPLFETSAKNPNDNDHVEAIFMTLA 165 (165)
T ss_dssp HHHHHHHHHT--TCCEEECCSSSGGGGSCHHHHHHHHC
T ss_pred HHHHHHHHHC--CCEEEEEecccCCcCcCHHHHHHHhC
Confidence 4556666655 35899999997 569999998763
No 54
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]}
Probab=98.33 E-value=1.4e-07 Score=68.64 Aligned_cols=100 Identities=20% Similarity=0.130 Sum_probs=61.7
Q ss_pred CCCEEEEeCCcchhhhc--------cc--ccccceEEEEEeCCCCCCCCc-------------CCCCCCCceeEEEEecC
Q 030407 73 KADLLLCESGGDNLAAN--------FS--RELADYIIYIIDVSGGDKIPR-------------KGGPGITQADLLVINKT 129 (178)
Q Consensus 73 ~~d~iiiEttG~~~~~~--------~~--~~~ad~~I~VvD~~~~~~~~~-------------~~~~qi~~adiiviNK~ 129 (178)
+..+.++.|.|..-... +. ...++.+..+++......... ........+.++|+||+
T Consensus 48 ~~~~~~~DtpG~~~~~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~ivv~NK~ 127 (185)
T d1lnza2 48 GRSFVMADLPGLIEGAHQGVGLGHQFLRHIERTRVIVHVIDMSGLEGRDPYDDYLTINQELSEYNLRLTERPQIIVANKM 127 (185)
T ss_dssp SCEEEEEEHHHHHHHTTCTTTTHHHHHHHHHHCCEEEEEEESSCSSCCCHHHHHHHHHHHHHHSCSSTTTSCBCBEEECT
T ss_pred CcEEEEecCCCcccCchHHHHHHHHHHHHHHHhhhhhheeeecccccchhhhhhhhhhhccchhhhhccCCcchhhcccc
Confidence 34578889999311000 10 012466777777654332211 00112345679999999
Q ss_pred CCCCchhHhHHHHHHHHHhcCCCCCEEEEecccCCCHHHHHHHHhhh
Q 030407 130 DLASAIGADLAVMERDALRMRDGGPFIFAQVGWVIGIIFTLSITHYI 176 (178)
Q Consensus 130 Dl~~~~~~~~~~~~~~l~~~np~a~i~~~SA~~g~gi~el~~~l~~~ 176 (178)
|+.+. . +.+....+.+....+++++||++|+||++|++.+.+.
T Consensus 128 Dl~~~--~--~~~~~~~~~~~~~~~v~~iSA~~g~Gi~~L~~~i~~~ 170 (185)
T d1lnza2 128 DMPEA--A--ENLEAFKEKLTDDYPVFPISAVTREGLRELLFEVANQ 170 (185)
T ss_dssp TSTTH--H--HHHHHHHHHCCSCCCBCCCSSCCSSTTHHHHHHHHHH
T ss_pred chHhH--H--HHHHHHHHHhccCCcEEEEECCCCCCHHHHHHHHHHh
Confidence 99865 3 2333334455567899999999999999999988654
No 55
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.33 E-value=2.3e-07 Score=67.00 Aligned_cols=102 Identities=14% Similarity=0.087 Sum_probs=57.8
Q ss_pred CCCEEEEeCCcchhh---hcccccccceEEEEEeCCCCCCCCc--C------CCCCCCceeEEEEecCCCCCchhHhHHH
Q 030407 73 KADLLLCESGGDNLA---ANFSRELADYIIYIIDVSGGDKIPR--K------GGPGITQADLLVINKTDLASAIGADLAV 141 (178)
Q Consensus 73 ~~d~iiiEttG~~~~---~~~~~~~ad~~I~VvD~~~~~~~~~--~------~~~qi~~adiiviNK~Dl~~~~~~~~~~ 141 (178)
.+.+-++++.|...- .......+|++|+|+|+++...... . .......+-++|.||.|+........+.
T Consensus 54 ~~~l~i~D~~G~e~~~~~~~~~~~~~~~~i~v~d~~~~~s~~~~~~~~~~~~~~~~~~~~iilv~~k~D~~~~~~~~~~~ 133 (173)
T d2fu5c1 54 RIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKER 133 (173)
T ss_dssp EEEEEEEEC---------CCTTTTTCSEEEEEEETTCHHHHHHHHHHHHHHHHHSCTTCEEEEEEEC--CCSCCCSCHHH
T ss_pred EEEEEEEECCCchhhHHHHHHhccCCCEEEEEEECCChhhHHHHHHHHHHhhhhccCCceEEEEEecccchhhcccHHHH
Confidence 356667899993110 1111234799999999987532110 0 0112335678999999998652233344
Q ss_pred HHHHHHhcCCCCCEEEEecccCCCHHHHHHHHhhh
Q 030407 142 MERDALRMRDGGPFIFAQVGWVIGIIFTLSITHYI 176 (178)
Q Consensus 142 ~~~~l~~~np~a~i~~~SA~~g~gi~el~~~l~~~ 176 (178)
..+..+.. +.+++++||++|+||+++|++|.+.
T Consensus 134 ~~~~~~~~--~~~~~e~Sa~~g~gv~e~f~~l~~~ 166 (173)
T d2fu5c1 134 GEKLALDY--GIKFMETSAKANINVENAFFTLARD 166 (173)
T ss_dssp HHHHHHHH--TCEEEECCC---CCHHHHHHHHHHH
T ss_pred HHHHHHhc--CCEEEEEeCCCCCCHHHHHHHHHHH
Confidence 44455443 5789999999999999999987653
No 56
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.33 E-value=2e-06 Score=59.93 Aligned_cols=101 Identities=12% Similarity=0.045 Sum_probs=62.7
Q ss_pred CCCEEEEeCCcchhh---hcccccccceEEEEEeCCCCCCCCc---------CCCCCCCceeEEEEecCCCCCchhHhHH
Q 030407 73 KADLLLCESGGDNLA---ANFSRELADYIIYIIDVSGGDKIPR---------KGGPGITQADLLVINKTDLASAIGADLA 140 (178)
Q Consensus 73 ~~d~iiiEttG~~~~---~~~~~~~ad~~I~VvD~~~~~~~~~---------~~~~qi~~adiiviNK~Dl~~~~~~~~~ 140 (178)
+.-..+..+.|..-. .......++..++++|..+...... ........+.+++.||.|+... ....
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~k~d~~~~--~~~~ 120 (166)
T d2qtvb1 43 NIKFTTFDLGGHIQARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNA--VSEA 120 (166)
T ss_dssp TCCEEEEECCCSGGGGGGGGGGCTTCSEEEEEEETTCGGGHHHHHHHHHHHHTCTTTTTCCEEEEEECTTSSSC--CCHH
T ss_pred CeeEEEEeeccchhhhhhHhhhhhheeeeeeeccccchhhhhhhhHHHHhhhhhhccCCceEEEEecccccccc--CCHH
Confidence 455666667773111 1111224688999999876433211 1222344567899999999765 3344
Q ss_pred HHHHHHHhcC----------CCCCEEEEecccCCCHHHHHHHHhh
Q 030407 141 VMERDALRMR----------DGGPFIFAQVGWVIGIIFTLSITHY 175 (178)
Q Consensus 141 ~~~~~l~~~n----------p~a~i~~~SA~~g~gi~el~~~l~~ 175 (178)
++.+.++..+ ...+++++||++|+|++|+|++|.+
T Consensus 121 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~SA~tg~Gv~e~~~~l~~ 165 (166)
T d2qtvb1 121 ELRSALGLLNTTGSQRIEGQRPVEVFMCSVVMRNGYLEAFQWLSQ 165 (166)
T ss_dssp HHHHHHTCSSCCC---CCSSCCEEEEEEBTTTTBSHHHHHHHHTT
T ss_pred HHHHHhhhhhhhHHHhhcccCCCEEEEeeCCCCCCHHHHHHHHhC
Confidence 4444443211 1236899999999999999999976
No 57
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]}
Probab=98.32 E-value=3.6e-07 Score=65.71 Aligned_cols=58 Identities=12% Similarity=-0.024 Sum_probs=45.0
Q ss_pred CceeEEEEecCCCCCchhHhH----HHHHHHHHhcCCCCCEEEEecccCCCHHHHHHHHhhhhC
Q 030407 119 TQADLLVINKTDLASAIGADL----AVMERDALRMRDGGPFIFAQVGWVIGIIFTLSITHYIVS 178 (178)
Q Consensus 119 ~~adiiviNK~Dl~~~~~~~~----~~~~~~l~~~np~a~i~~~SA~~g~gi~el~~~l~~~~~ 178 (178)
....++++||+|+++. ... +.+.+.++...+..+++++||++|+||++|++.|.++-|
T Consensus 127 ~~~~~~v~~k~D~~~~--~~~~~~~~~~~~~l~~~~~~~~~i~vSA~~g~Gid~L~~~i~~~~~ 188 (188)
T d1puia_ 127 NIAVLVLLTKADKLAS--GARKAQLNMVREAVLAFNGDVQVETFSSLKKQGVDKLRQKLDTWFS 188 (188)
T ss_dssp TCCEEEEEECGGGSCH--HHHHHHHHHHHHHHGGGCSCEEEEECBTTTTBSHHHHHHHHHHHHC
T ss_pred cccccchhhhhhccCH--HHHHHHHHHHHHHHHhhCCCCcEEEEeCCCCCCHHHHHHHHHHHhC
Confidence 4467999999999886 443 344455555566779999999999999999999987643
No 58
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.32 E-value=2.3e-07 Score=67.01 Aligned_cols=101 Identities=15% Similarity=0.061 Sum_probs=63.1
Q ss_pred CCCEEEEeCCcchhhhcc---cccccceEEEEEeCCCCCCCCc--C-C-----CCCCCceeEEEEecCCCCCchhHhHHH
Q 030407 73 KADLLLCESGGDNLAANF---SRELADYIIYIIDVSGGDKIPR--K-G-----GPGITQADLLVINKTDLASAIGADLAV 141 (178)
Q Consensus 73 ~~d~iiiEttG~~~~~~~---~~~~ad~~I~VvD~~~~~~~~~--~-~-----~~qi~~adiiviNK~Dl~~~~~~~~~~ 141 (178)
.+.+.+.++.|.-.-... ....+|++|+|+|.++...... . + ...-..+-++|.||+|+........+.
T Consensus 51 ~~~~~i~d~~g~~~~~~~~~~~~~~~d~~ilv~d~~~~~sf~~~~~~~~~~~~~~~~~~piilv~nK~D~~~~~~~~~~~ 130 (173)
T d2a5ja1 51 QIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREE 130 (173)
T ss_dssp EEEEEEECCTTGGGTSCCCHHHHTTCSEEEEEEETTCHHHHHTHHHHHHHHHHHSCTTCEEEEEEECTTCGGGCCSCHHH
T ss_pred EEEEEeecccCccchhhHHHHHhhccCEEEEEEeecChHHHHhHHHHHHHHHHhCCCCCeEEEEecCCchhhhhhhHHHH
Confidence 467778888883111111 1124699999999977532211 0 0 001234668999999986432133344
Q ss_pred HHHHHHhcCCCCCEEEEecccCCCHHHHHHHHhh
Q 030407 142 MERDALRMRDGGPFIFAQVGWVIGIIFTLSITHY 175 (178)
Q Consensus 142 ~~~~l~~~np~a~i~~~SA~~g~gi~el~~~l~~ 175 (178)
.....++. ..+++++||++|.||+++|..+.+
T Consensus 131 ~~~~a~~~--~~~~~e~Sa~tg~~V~e~f~~i~~ 162 (173)
T d2a5ja1 131 GEAFAREH--GLIFMETSAKTACNVEEAFINTAK 162 (173)
T ss_dssp HHHHHHHH--TCEEEEECTTTCTTHHHHHHHHHH
T ss_pred HHHHHHHc--CCEEEEecCCCCCCHHHHHHHHHH
Confidence 55555544 468999999999999999987654
No 59
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.31 E-value=2.6e-07 Score=66.81 Aligned_cols=101 Identities=12% Similarity=-0.058 Sum_probs=62.0
Q ss_pred CCCEEEEeCCcchhhhcc---cccccceEEEEEeCCCCCCCCc---CCC-----CCCCceeEEEEecCCCCCchhHhHHH
Q 030407 73 KADLLLCESGGDNLAANF---SRELADYIIYIIDVSGGDKIPR---KGG-----PGITQADLLVINKTDLASAIGADLAV 141 (178)
Q Consensus 73 ~~d~iiiEttG~~~~~~~---~~~~ad~~I~VvD~~~~~~~~~---~~~-----~qi~~adiiviNK~Dl~~~~~~~~~~ 141 (178)
.+.+-+.++.|..--... ....++++++|+|.++...... .+. ..-..+-++|.||+|+.+......+.
T Consensus 52 ~~~~~i~d~~g~e~~~~~~~~~~~~~~~~i~v~d~~~~~S~~~~~~~~~~i~~~~~~~~piilvgnK~Dl~~~~~~~~~~ 131 (175)
T d2f9la1 52 TIKAQIWDTAGQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDE 131 (175)
T ss_dssp EEEEEEEECSSGGGTTCCCHHHHTTCSEEEEEEETTCHHHHHTHHHHHHHHHHHSCTTCEEEEEEECTTCGGGCCSCHHH
T ss_pred EEEEEecccCCcHHHHHHHHHHhhccCeEEEEEECCCcccchhHHHHHHHHHHhcCCCCcEEEEEeeecccccccchHHH
Confidence 467788899993110010 1124699999999987532211 000 00124678899999997542122233
Q ss_pred HHHHHHhcCCCCCEEEEecccCCCHHHHHHHHhh
Q 030407 142 MERDALRMRDGGPFIFAQVGWVIGIIFTLSITHY 175 (178)
Q Consensus 142 ~~~~l~~~np~a~i~~~SA~~g~gi~el~~~l~~ 175 (178)
.....+.. ..+++++||++|+|++++|+.+.+
T Consensus 132 ~~~~~~~~--~~~~~e~Sa~~g~~i~e~f~~l~~ 163 (175)
T d2f9la1 132 ARAFAEKN--NLSFIETSALDSTNVEEAFKNILT 163 (175)
T ss_dssp HHHHHHHT--TCEEEECCTTTCTTHHHHHHHHHH
T ss_pred HHHhhccc--CceEEEEecCCCcCHHHHHHHHHH
Confidence 34444433 468999999999999999987543
No 60
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Probab=98.25 E-value=9.4e-08 Score=67.87 Aligned_cols=73 Identities=15% Similarity=0.076 Sum_probs=50.2
Q ss_pred ccceEEEEEeCCCCCCCCcC--CCC-----CCCceeEEEEecCCCCCchhHhHHHHHHHHHhcCCCCCEEEEecccCCCH
Q 030407 94 LADYIIYIIDVSGGDKIPRK--GGP-----GITQADLLVINKTDLASAIGADLAVMERDALRMRDGGPFIFAQVGWVIGI 166 (178)
Q Consensus 94 ~ad~~I~VvD~~~~~~~~~~--~~~-----qi~~adiiviNK~Dl~~~~~~~~~~~~~~l~~~np~a~i~~~SA~~g~gi 166 (178)
.+|.+++++|+......... +.. .-..+.++|+||+|+.++ ... +++ .+..+++++||++|+||
T Consensus 80 ~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~iilv~NK~Dl~~~--~~~------~~~-~~~~~~~~iSAk~~~gi 150 (161)
T d2gj8a1 80 QADRVLFMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVRNKADITGE--TLG------MSE-VNGHALIRLSARTGEGV 150 (161)
T ss_dssp TCSEEEEEEETTTCCCCSHHHHCHHHHHHSCTTCCEEEEEECHHHHCC--CCE------EEE-ETTEEEEECCTTTCTTH
T ss_pred hccccceeeccccccchhhhhhhhhhhhhcccccceeeccchhhhhhh--HHH------HHH-hCCCcEEEEECCCCCCH
Confidence 46899999999875432210 000 013467999999999765 210 112 24568999999999999
Q ss_pred HHHHHHHhh
Q 030407 167 IFTLSITHY 175 (178)
Q Consensus 167 ~el~~~l~~ 175 (178)
++|+++|.+
T Consensus 151 ~~L~~~l~~ 159 (161)
T d2gj8a1 151 DVLRNHLKQ 159 (161)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999999865
No 61
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=98.22 E-value=6.2e-07 Score=68.25 Aligned_cols=79 Identities=19% Similarity=0.094 Sum_probs=56.3
Q ss_pred cceEEEEEeCCCCCCCCc---CC---CCCCCceeEEEEecCCCCCchhHhHHHHHHHHHhcCCCCCEEEEecccCCCHHH
Q 030407 95 ADYIIYIIDVSGGDKIPR---KG---GPGITQADLLVINKTDLASAIGADLAVMERDALRMRDGGPFIFAQVGWVIGIIF 168 (178)
Q Consensus 95 ad~~I~VvD~~~~~~~~~---~~---~~qi~~adiiviNK~Dl~~~~~~~~~~~~~~l~~~np~a~i~~~SA~~g~gi~e 168 (178)
.|.++.|+.+.+++.... ++ .......-+||+||+||.++ ++.+.+........+..+++.+||++|+|+++
T Consensus 11 iD~vliV~s~~~P~~~~~~ldR~Lv~a~~~~i~pvIvlnK~DL~~~--~~~~~~~~~~~~~~~~~~v~~vSa~~~~g~~~ 88 (225)
T d1u0la2 11 VDQVILVVTVKMPETSTYIIDKFLVLAEKNELETVMVINKMDLYDE--DDLRKVRELEEIYSGLYPIVKTSAKTGMGIEE 88 (225)
T ss_dssp CCEEEEEECSSTTCCCHHHHHHHHHHHHHTTCEEEEEECCGGGCCH--HHHHHHHHHHHHHTTTSCEEECCTTTCTTHHH
T ss_pred CCEEEEEEeCCCCCCCHHHHHHHHHHHHHcCCCEEEEEeCcccCCH--HHHHHHHHhhcccccceeEEEeccccchhHhh
Confidence 477888887755432211 11 01123356999999999988 67777776666555667999999999999999
Q ss_pred HHHHHhh
Q 030407 169 TLSITHY 175 (178)
Q Consensus 169 l~~~l~~ 175 (178)
|.+++..
T Consensus 89 L~~~l~~ 95 (225)
T d1u0la2 89 LKEYLKG 95 (225)
T ss_dssp HHHHHSS
T ss_pred HHHHhcC
Confidence 9988753
No 62
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.21 E-value=7.4e-07 Score=63.66 Aligned_cols=101 Identities=19% Similarity=0.123 Sum_probs=65.6
Q ss_pred CCCEEEEeCCcchhhhcc---cccccceEEEEEeCCCCCCCCcC--------CCCCCCceeEEEEecCCCCCchhHhHHH
Q 030407 73 KADLLLCESGGDNLAANF---SRELADYIIYIIDVSGGDKIPRK--------GGPGITQADLLVINKTDLASAIGADLAV 141 (178)
Q Consensus 73 ~~d~iiiEttG~~~~~~~---~~~~ad~~I~VvD~~~~~~~~~~--------~~~qi~~adiiviNK~Dl~~~~~~~~~~ 141 (178)
.+.+-+++|.|..--... ....++++++|+|..+....... ....-..+.+++.||.|+.+.. ...+.
T Consensus 50 ~~~~~i~Dt~G~~~~~~~~~~~~~~~~~~i~v~d~~~~~s~~~~~~~~~~~~~~~~~~~~~i~~~~k~d~~~~~-~~~~~ 128 (166)
T d1g16a_ 50 KVKLQIWDTAGQERFRTITTAYYRGAMGIILVYDITDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMETRV-VTADQ 128 (166)
T ss_dssp EEEEEEECCTTGGGTSCCCHHHHTTEEEEEEEEETTCHHHHHTHHHHHHHHHHHSCTTCEEEEEEECTTCTTCC-SCHHH
T ss_pred EEEEEEEECCCchhhHHHHHHHHhcCCEEEEEEECCCccCHHHHHhhhhhhhccccCcceeeeecchhhhhhhh-hhHHH
Confidence 466778999993211111 11347999999999875422110 0112334678899999987652 22344
Q ss_pred HHHHHHhcCCCCCEEEEecccCCCHHHHHHHHhhh
Q 030407 142 MERDALRMRDGGPFIFAQVGWVIGIIFTLSITHYI 176 (178)
Q Consensus 142 ~~~~l~~~np~a~i~~~SA~~g~gi~el~~~l~~~ 176 (178)
..+..++. +.+++++||++|+||+++|+.|.+.
T Consensus 129 ~~~~~~~~--~~~~~~~Sa~~~~~v~e~f~~l~~~ 161 (166)
T d1g16a_ 129 GEALAKEL--GIPFIESSAKNDDNVNEIFFTLAKL 161 (166)
T ss_dssp HHHHHHHH--TCCEEECBTTTTBSHHHHHHHHHHH
T ss_pred HHHHHHhc--CCeEEEECCCCCCCHHHHHHHHHHH
Confidence 45555544 4699999999999999999988654
No 63
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.21 E-value=4.3e-07 Score=65.17 Aligned_cols=101 Identities=14% Similarity=-0.037 Sum_probs=65.1
Q ss_pred CCCEEEEeCCcchhhh---cccccccceEEEEEeCCCCCCCCc---CC-----CCCCCceeEEEEecCCCCCch---hHh
Q 030407 73 KADLLLCESGGDNLAA---NFSRELADYIIYIIDVSGGDKIPR---KG-----GPGITQADLLVINKTDLASAI---GAD 138 (178)
Q Consensus 73 ~~d~iiiEttG~~~~~---~~~~~~ad~~I~VvD~~~~~~~~~---~~-----~~qi~~adiiviNK~Dl~~~~---~~~ 138 (178)
.+++-+.++.|...-. ......+|.+++|+|.++...... .+ ...-..+-+++.||+|+.+.. ...
T Consensus 51 ~~~l~i~d~~g~~~~~~~~~~~~~~~~~~ilv~d~~~~~s~~~~~~~~~~~~~~~~~~~~~~~v~nk~d~~~~~~~~~v~ 130 (170)
T d1ek0a_ 51 TVKFEIWDTAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDMLQEGGERKVA 130 (170)
T ss_dssp EEEEEEEEECCSGGGGGGHHHHHTTCSEEEEEEETTCHHHHHHHHHHHHHHHHHSCTTCEEEEEEECGGGGGSSCCCCSC
T ss_pred cccccccccCCchhHHHHHHHHHhccceEEEEEeCCcccchhhhhhhhhhhccccccccceeeeecccccccccchhhhh
Confidence 4678889999942111 111235799999999987532211 00 011234678999999985431 122
Q ss_pred HHHHHHHHHhcCCCCCEEEEecccCCCHHHHHHHHhh
Q 030407 139 LAVMERDALRMRDGGPFIFAQVGWVIGIIFTLSITHY 175 (178)
Q Consensus 139 ~~~~~~~l~~~np~a~i~~~SA~~g~gi~el~~~l~~ 175 (178)
.+...+..+.. +.+++++||++|+||+++|+.|.+
T Consensus 131 ~~~~~~~~~~~--~~~~~e~Sak~g~gV~e~F~~i~~ 165 (170)
T d1ek0a_ 131 REEGEKLAEEK--GLLFFETSAKTGENVNDVFLGIGE 165 (170)
T ss_dssp HHHHHHHHHHH--TCEEEECCTTTCTTHHHHHHHHHT
T ss_pred HHHHHHHHHHc--CCEEEEecCCCCcCHHHHHHHHHH
Confidence 34455556655 358999999999999999998754
No 64
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.17 E-value=6.7e-07 Score=65.54 Aligned_cols=101 Identities=16% Similarity=0.077 Sum_probs=63.4
Q ss_pred CCCEEEEeCCcch----hhhcccccccceEEEEEeCCCCCCCCc---CCCC-----CCCceeEEEEecCCCCCchh----
Q 030407 73 KADLLLCESGGDN----LAANFSRELADYIIYIIDVSGGDKIPR---KGGP-----GITQADLLVINKTDLASAIG---- 136 (178)
Q Consensus 73 ~~d~iiiEttG~~----~~~~~~~~~ad~~I~VvD~~~~~~~~~---~~~~-----qi~~adiiviNK~Dl~~~~~---- 136 (178)
.+.+-++++.|.. +...+. ..+|++++|+|.++...... .+.. .-..+-++|.||+|+.+...
T Consensus 50 ~~~l~i~D~~g~~~~~~~~~~~~-~~~~~~ilv~d~~~~~Sf~~~~~~~~~~~~~~~~~~~i~lvgnK~Dl~~~~~~~~~ 128 (191)
T d2ngra_ 50 PYTLGLFDTAGQEDYDRLRPLSY-PQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEK 128 (191)
T ss_dssp EEEEEEEEECCSGGGTTTGGGGC-TTCSEEEEEEETTCHHHHHHHHHTHHHHHHHHCTTCCEEEEEECGGGGGCHHHHHH
T ss_pred eeeeeccccccchhhhhhhhhcc-cccceeecccccchHHHHHHHHHHHHHHHhhcCCCCceEEEeccccccccchhhhh
Confidence 4677889999942 112222 25799999999987643211 1100 01345689999999864410
Q ss_pred --------HhHHHHHHHHHhcCCCCCEEEEecccCCCHHHHHHHHhh
Q 030407 137 --------ADLAVMERDALRMRDGGPFIFAQVGWVIGIIFTLSITHY 175 (178)
Q Consensus 137 --------~~~~~~~~~l~~~np~a~i~~~SA~~g~gi~el~~~l~~ 175 (178)
...+...++.++.+ ..+++++||++|+||+++|+.+.+
T Consensus 129 ~~~~~~~~v~~~~~~~~~~~~~-~~~~~e~SAk~~~~V~e~f~~l~~ 174 (191)
T d2ngra_ 129 LAKNKQKPITPETAEKLARDLK-AVKYVECSALTQKGLKNVFDEAIL 174 (191)
T ss_dssp HHTTTCCCCCHHHHHHHHHHTT-CSCEEECCTTTCTTHHHHHHHHHH
T ss_pred hhhcccccccHHHHHHHHHHcC-CCeEEEEeCCCCcCHHHHHHHHHH
Confidence 11223344444443 358999999999999999987654
No 65
>d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}
Probab=98.15 E-value=9.9e-07 Score=65.64 Aligned_cols=103 Identities=11% Similarity=0.074 Sum_probs=64.8
Q ss_pred CCCEEEEeCCcch--hhhccc-ccccceEEEEEeCCCCCCCCcC-CC---CCCCc-eeEEEEecCCCCCchhHhHHH---
Q 030407 73 KADLLLCESGGDN--LAANFS-RELADYIIYIIDVSGGDKIPRK-GG---PGITQ-ADLLVINKTDLASAIGADLAV--- 141 (178)
Q Consensus 73 ~~d~iiiEttG~~--~~~~~~-~~~ad~~I~VvD~~~~~~~~~~-~~---~qi~~-adiiviNK~Dl~~~~~~~~~~--- 141 (178)
+..+-++.|.|-. ...+.. ...+|.+++|+|+..|...+.+ +. ..+.. .-++++||+|++++. +..+.
T Consensus 65 ~~~~~~iDtPGh~~f~~~~~~~~~~aD~allVVda~~G~~~QT~~~~~~a~~~~~~~iIv~iNK~D~~~~~-~~~~~i~~ 143 (196)
T d1d2ea3 65 ARHYAHTDCPGHADYVKNMITGTAPLDGCILVVAANDGPMPQTREHLLLARQIGVEHVVVYVNKADAVQDS-EMVELVEL 143 (196)
T ss_dssp SCEEEEEECSSHHHHHHHHHHTSSCCSEEEEEEETTTCSCHHHHHHHHHHHHTTCCCEEEEEECGGGCSCH-HHHHHHHH
T ss_pred eeeEEeecCcchHHHHHHHHHHHhhcCeEEEEEEcCCCCchhHHHHHHHHHHhcCCcEEEEEecccccccH-HHHHHHHH
Confidence 5678999999921 111111 1246999999999988654321 11 11222 246779999998651 22233
Q ss_pred -HHHHHHhcC--C-CCCEEEEecccC----------CCHHHHHHHHhhh
Q 030407 142 -MERDALRMR--D-GGPFIFAQVGWV----------IGIIFTLSITHYI 176 (178)
Q Consensus 142 -~~~~l~~~n--p-~a~i~~~SA~~g----------~gi~el~~~l~~~ 176 (178)
+...+...+ | .+|++++||++| .|+++|++.+.+.
T Consensus 144 ~i~~~l~~~~~~~~~~pii~iSa~~g~~~~~~~~~~~~~~~Lldai~~~ 192 (196)
T d1d2ea3 144 EIRELLTEFGYKGEETPIIVGSALCALEQRDPELGLKSVQKLLDAVDTY 192 (196)
T ss_dssp HHHHHHHHTTSCTTTSCEEECCHHHHHTTCCTTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCcccCEEEEEEccccccccCcccccCCHHHHHHHHHhh
Confidence 334444332 2 378999999999 5999999988664
No 66
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=98.14 E-value=1.5e-06 Score=62.31 Aligned_cols=104 Identities=11% Similarity=-0.038 Sum_probs=64.4
Q ss_pred CCCCEEEEeCCcchhh------h---c---ccccccceEEEEEeCCCCCCCCcCC---CCCCCceeEEEEecCCCCCchh
Q 030407 72 FKADLLLCESGGDNLA------A---N---FSRELADYIIYIIDVSGGDKIPRKG---GPGITQADLLVINKTDLASAIG 136 (178)
Q Consensus 72 ~~~d~iiiEttG~~~~------~---~---~~~~~ad~~I~VvD~~~~~~~~~~~---~~qi~~adiiviNK~Dl~~~~~ 136 (178)
.....+.+.+.|.... . . .....++.++++.|+.......... ...-...-++++||+|.....
T Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~l~~~~~~~i~v~~k~d~~~~~- 129 (179)
T d1egaa1 51 GAYQAIYVDTPGLHMEEKRAINRLMNKAASSSIGDVELVIFVVEGTRWTPDDEMVLNKLREGKAPVILAVNKVDNVQEK- 129 (179)
T ss_dssp TTEEEEEESSSSCCHHHHHHHHHHHTCCTTSCCCCEEEEEEEEETTCCCHHHHHHHHHHHSSSSCEEEEEESTTTCCCH-
T ss_pred CCceeEeecCCCceecchhhhhhhhhhccccchhhcceeEEEEecCccchhHHHHHHHhhhccCceeeeeeeeeccchh-
Confidence 3556777788884211 0 0 0112347788888876543221100 001123469999999988762
Q ss_pred HhHHHHHHHHHhcCCCCCEEEEecccCCCHHHHHHHHhhh
Q 030407 137 ADLAVMERDALRMRDGGPFIFAQVGWVIGIIFTLSITHYI 176 (178)
Q Consensus 137 ~~~~~~~~~l~~~np~a~i~~~SA~~g~gi~el~~~l~~~ 176 (178)
.++....+.+....+..+++++||++|+||++|++.|.+.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~vSA~~g~gi~~L~~~i~~~ 169 (179)
T d1egaa1 130 ADLLPHLQFLASQMNFLDIVPISAETGLNVDTIAAIVRKH 169 (179)
T ss_dssp HHHHHHHHHHHTTSCCSEEEECCTTTTTTHHHHHHHHHTT
T ss_pred hhhhhHhhhhhhhcCCCCEEEEeCcCCCCHHHHHHHHHHh
Confidence 3344444555555566799999999999999999998653
No 67
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.13 E-value=6.9e-07 Score=64.97 Aligned_cols=101 Identities=14% Similarity=0.035 Sum_probs=60.4
Q ss_pred CCCEEEEeCCcch----hhhcccccccceEEEEEeCCCCCCCCc---CCCC-----CCCceeEEEEecCCCCCchhH---
Q 030407 73 KADLLLCESGGDN----LAANFSRELADYIIYIIDVSGGDKIPR---KGGP-----GITQADLLVINKTDLASAIGA--- 137 (178)
Q Consensus 73 ~~d~iiiEttG~~----~~~~~~~~~ad~~I~VvD~~~~~~~~~---~~~~-----qi~~adiiviNK~Dl~~~~~~--- 137 (178)
.+.+-+..+.|.. +...+. ..+|++++|+|.++...... .+.. .-..+-++|.||+|+.++...
T Consensus 52 ~~~~~~~d~~g~~~~~~~~~~~~-~~~~~~ilv~d~~~~~sf~~i~~~~~~~~~~~~~~~piilvgnK~Dl~~~~~~~~~ 130 (183)
T d1mh1a_ 52 PVNLGLWDTAGQEDYDRLRPLSY-PQTDVSLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKDTIEK 130 (183)
T ss_dssp EEEEEEECCCCSGGGTTTGGGGC-TTCSEEEEEEETTCHHHHHHHHHTHHHHHHHHSTTSCEEEEEECHHHHTCHHHHHH
T ss_pred ceEEEeecccccccchhhhhhcc-cccceeeeeeccchHHHHHHHHHHHHHHHHHhCCCCcEEEEeecccchhhhhhhhh
Confidence 3555667777731 112222 35799999999986542211 0000 012467899999998654100
Q ss_pred ---------hHHHHHHHHHhcCCCCCEEEEecccCCCHHHHHHHHhh
Q 030407 138 ---------DLAVMERDALRMRDGGPFIFAQVGWVIGIIFTLSITHY 175 (178)
Q Consensus 138 ---------~~~~~~~~l~~~np~a~i~~~SA~~g~gi~el~~~l~~ 175 (178)
.........+.. ...++++|||++|+||+++|+.+.+
T Consensus 131 ~~~~~~~~~~~~~~~~~a~~~-~~~~~~E~SAk~~~~V~e~F~~l~~ 176 (183)
T d1mh1a_ 131 LKEKKLTPITYPQGLAMAKEI-GAVKYLECSALTQRGLKTVFDEAIR 176 (183)
T ss_dssp HHHTTCCCCCHHHHHHHHHHT-TCSEEEECCTTTCTTHHHHHHHHHH
T ss_pred hhhccccchhhHHHHHHHHHc-CCceEEEcCCCCCcCHHHHHHHHHH
Confidence 011222333333 2368999999999999999997764
No 68
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]}
Probab=98.11 E-value=3.1e-06 Score=59.43 Aligned_cols=80 Identities=15% Similarity=0.070 Sum_probs=52.9
Q ss_pred cceEEEEEeCCCCCCCCc---------CCCCCCCceeEEEEecCCCCCchhHhHHHHHHHHHh---cCCCCCEEEEeccc
Q 030407 95 ADYIIYIIDVSGGDKIPR---------KGGPGITQADLLVINKTDLASAIGADLAVMERDALR---MRDGGPFIFAQVGW 162 (178)
Q Consensus 95 ad~~I~VvD~~~~~~~~~---------~~~~qi~~adiiviNK~Dl~~~~~~~~~~~~~~l~~---~np~a~i~~~SA~~ 162 (178)
.+..+.++|......... .....-..+-+++.||.|+... .....+...+.. .+...+++++||++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~iv~nk~Dl~~~--~~~~~i~~~~~~~~~~~~~~~~~~~SA~~ 150 (169)
T d1upta_ 73 TDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQA--MTSSEMANSLGLPALKDRKWQIFKTSATK 150 (169)
T ss_dssp CSEEEEEEETTCCTTHHHHHHHHHHHHTCGGGTTCEEEEEEECTTSTTC--CCHHHHHHHHTGGGCTTSCEEEEECCTTT
T ss_pred hhhhhhhhhhhhcchhhhccchhhhhhhhhccccceEEEEEeecccccc--ccHHHHHHHHHHHHHhcCCCEEEEEeCCC
Confidence 588899999875443211 0011123356899999999876 444444444321 23456899999999
Q ss_pred CCCHHHHHHHHhhh
Q 030407 163 VIGIIFTLSITHYI 176 (178)
Q Consensus 163 g~gi~el~~~l~~~ 176 (178)
|+||+++|++|.+.
T Consensus 151 g~gv~e~~~~l~~~ 164 (169)
T d1upta_ 151 GTGLDEAMEWLVET 164 (169)
T ss_dssp CTTHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 99999999988654
No 69
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.07 E-value=3e-06 Score=61.45 Aligned_cols=100 Identities=14% Similarity=0.082 Sum_probs=62.6
Q ss_pred CCCEEEEeCCcchhhhcccccccceEEEEEeCCCCCCCCc--C-------CC--CCCCceeEEEEecCCCCCch--hHhH
Q 030407 73 KADLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPR--K-------GG--PGITQADLLVINKTDLASAI--GADL 139 (178)
Q Consensus 73 ~~d~iiiEttG~~~~~~~~~~~ad~~I~VvD~~~~~~~~~--~-------~~--~qi~~adiiviNK~Dl~~~~--~~~~ 139 (178)
.+.+-+.+|.| .....|.. .+|++|+|+|.++...... . .. ..-..+-++|+||.|+.... ....
T Consensus 51 ~~~l~i~Dt~g-~~~~~~~~-~ad~~ilVfd~~~~~Sf~~~~~~~~~i~~~~~~~~~~~pi~lV~~k~d~d~~~~~~v~~ 128 (175)
T d2bmja1 51 THLVLIREEAG-APDAKFSG-WADAVIFVFSLEDENSFQAVSRLHGQLSSLRGEGRGGLALALVGTQDRISASSPRVVGD 128 (175)
T ss_dssp EEEEEEEECSS-CCCHHHHH-HCSEEEEEEETTCHHHHHHHHHHHHHHHHHCC--CCCCEEEEEEECTTCCSSSCCCSCH
T ss_pred EEEEEEeeccc-cccccccc-ccceeEEEeecccchhhhhhHHHHHHHHHHhhcccCCccEEEEeeecCcchhhhcchhH
Confidence 46777889999 23333332 5799999999987532111 0 01 11123568899998874321 0112
Q ss_pred HHHHHHHHhcCCCCCEEEEecccCCCHHHHHHHHhh
Q 030407 140 AVMERDALRMRDGGPFIFAQVGWVIGIIFTLSITHY 175 (178)
Q Consensus 140 ~~~~~~l~~~np~a~i~~~SA~~g~gi~el~~~l~~ 175 (178)
++..++.++. ...+++++||++|.|++++|..+.+
T Consensus 129 ~~~~~~~~~~-~~~~~~e~SAk~~~~v~~~F~~l~~ 163 (175)
T d2bmja1 129 ARARALCADM-KRCSYYETCATYGLNVDRVFQEVAQ 163 (175)
T ss_dssp HHHHHHHHTS-TTEEEEEEBTTTTBTHHHHHHHHHH
T ss_pred HHHHHHHHHh-CCCeEEEeCCCCCcCHHHHHHHHHH
Confidence 3344444443 3468999999999999999987654
No 70
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=98.05 E-value=1.5e-06 Score=62.60 Aligned_cols=83 Identities=11% Similarity=0.027 Sum_probs=50.8
Q ss_pred ccceEEEEEeCCCCCCCCc-----CCC----------CCCCceeEEEEecCCCCCchhHhHHHHHHHHHhcC--CCCCEE
Q 030407 94 LADYIIYIIDVSGGDKIPR-----KGG----------PGITQADLLVINKTDLASAIGADLAVMERDALRMR--DGGPFI 156 (178)
Q Consensus 94 ~ad~~I~VvD~~~~~~~~~-----~~~----------~qi~~adiiviNK~Dl~~~~~~~~~~~~~~l~~~n--p~a~i~ 156 (178)
.+|.+++|+|+........ ... .....+-++|+||+|+++......+.+.+.++... +..+++
T Consensus 81 ~~d~~~~vvD~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~p~iiv~NK~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (184)
T d2cxxa1 81 NIDVAVLVVDGKAAPEIIKRWEKRGEIPIDVEFYQFLRELDIPTIVAVNKLDKIKNVQEVINFLAEKFEVPLSEIDKVFI 160 (184)
T ss_dssp GCCEEEEEEETTHHHHHHHHHHHTTCCCHHHHHHHHHHHTTCCEEEEEECGGGCSCHHHHHHHHHHHHTCCGGGHHHHEE
T ss_pred ccchheeeeeccccchhhhhhhhccccHHHHHHHHHHHHcCCCEEEEEeeeehhhhHHHHHHHHHHHhcccccccCCeEE
Confidence 3589999999864321000 000 01234569999999998762122222322222111 124689
Q ss_pred EEecccCCCHHHHHHHHhhh
Q 030407 157 FAQVGWVIGIIFTLSITHYI 176 (178)
Q Consensus 157 ~~SA~~g~gi~el~~~l~~~ 176 (178)
++||++|+||++|++.|.+.
T Consensus 161 ~vSA~~g~gi~~L~~~i~~~ 180 (184)
T d2cxxa1 161 PISAKFGDNIERLKNRIFEV 180 (184)
T ss_dssp ECCTTTCTTHHHHHHHHHHH
T ss_pred EEECCCCCCHHHHHHHHHHH
Confidence 99999999999999998765
No 71
>d1zunb3 c.37.1.8 (B:16-237) Sulfate adenylate transferase subunit cysN/C, EF-Tu domain G-like domain {Pseudomonas syringae pv. tomato [TaxId: 323]}
Probab=98.04 E-value=8.3e-07 Score=67.32 Aligned_cols=93 Identities=14% Similarity=0.088 Sum_probs=55.7
Q ss_pred CCEEEEeCCcch-hh-hcc-cccccceEEEEEeCCCCCCCCcC----CCCCCC-ceeEEEEecCCCCCchhHhH----HH
Q 030407 74 ADLLLCESGGDN-LA-ANF-SRELADYIIYIIDVSGGDKIPRK----GGPGIT-QADLLVINKTDLASAIGADL----AV 141 (178)
Q Consensus 74 ~d~iiiEttG~~-~~-~~~-~~~~ad~~I~VvD~~~~~~~~~~----~~~qi~-~adiiviNK~Dl~~~~~~~~----~~ 141 (178)
..+-||.|.|-. .. .+. ....+|.+++|+|+..|...+.. ....+. ..-++++||+|+.+...... +.
T Consensus 89 ~~~~iiD~PGH~dfv~~~~~g~~~aD~ailVvda~~G~~~Qt~e~~~~~~~~gv~~iiv~vNK~D~~~~~~~~~~~~~~~ 168 (222)
T d1zunb3 89 RKFIIADTPGHEQYTRNMATGASTCDLAIILVDARYGVQTQTRRHSYIASLLGIKHIVVAINKMDLNGFDERVFESIKAD 168 (222)
T ss_dssp EEEEEEECCCSGGGHHHHHHHHTTCSEEEEEEETTTCSCHHHHHHHHHHHHTTCCEEEEEEECTTTTTSCHHHHHHHHHH
T ss_pred eEEEEEeccchhhhhhhhccccccCceEEEEeccccCcccchHHHHHHHHHcCCCEEEEEEEccccccccceehhhhHHH
Confidence 457899999921 11 111 11246999999999887654321 001122 12588999999987521222 23
Q ss_pred HHHHHHhcC--C-CCCEEEEecccCCCH
Q 030407 142 MERDALRMR--D-GGPFIFAQVGWVIGI 166 (178)
Q Consensus 142 ~~~~l~~~n--p-~a~i~~~SA~~g~gi 166 (178)
+...+++.. + ..+++++||++|+|+
T Consensus 169 l~~~~~~~~~~~~~i~~IPiSA~~G~ni 196 (222)
T d1zunb3 169 YLKFAEGIAFKPTTMAFVPMSALKGDNV 196 (222)
T ss_dssp HHHHHHTTTCCCSEEEEEECCTTTCTTT
T ss_pred HhhhhHhhccCCCceEEEEEEcccCccC
Confidence 344444442 2 247799999999998
No 72
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.98 E-value=1.7e-06 Score=62.84 Aligned_cols=104 Identities=15% Similarity=0.124 Sum_probs=63.9
Q ss_pred CCCCEEEEeCCcchhh---hcccccccceEEEEEeCCCCCCCCc---CCCCC-----CCceeEEEEecCCCCCchh----
Q 030407 72 FKADLLLCESGGDNLA---ANFSRELADYIIYIIDVSGGDKIPR---KGGPG-----ITQADLLVINKTDLASAIG---- 136 (178)
Q Consensus 72 ~~~d~iiiEttG~~~~---~~~~~~~ad~~I~VvD~~~~~~~~~---~~~~q-----i~~adiiviNK~Dl~~~~~---- 136 (178)
..+.+-++++.|..-- .+.....+|.+++|+|.++...... .+... -..+-++|.||+|+.+...
T Consensus 48 ~~~~~~i~D~~g~~~~~~~~~~~~~~~~~~ilv~d~~~~~Sf~~~~~~~~~~~~~~~~~~~iilVgnK~Dl~~~~~~~~~ 127 (179)
T d1m7ba_ 48 QRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVSTLVE 127 (179)
T ss_dssp CEEEEEEEEECCSGGGTTTGGGGCTTCSEEEEEEETTCHHHHHHHHHTHHHHHHHHCTTCEEEEEEECGGGGGCHHHHHH
T ss_pred eEEeeccccccccccccccccchhhhhhhhheeeecccCCCHHHHHHHHHHHHhccCCcceEEEEEecccccccchhhHH
Confidence 3577778899993211 1122235799999999987543211 11000 1345699999999864310
Q ss_pred --------HhHHHHHHHHHhcCCCCCEEEEecccCC-CHHHHHHHHhhh
Q 030407 137 --------ADLAVMERDALRMRDGGPFIFAQVGWVI-GIIFTLSITHYI 176 (178)
Q Consensus 137 --------~~~~~~~~~l~~~np~a~i~~~SA~~g~-gi~el~~~l~~~ 176 (178)
...++..+..++.+ ..++++|||++|+ |++++|+.+.+.
T Consensus 128 ~~~~~~~~V~~~e~~~~a~~~~-~~~y~E~SAk~~~n~i~~~F~~~~~~ 175 (179)
T d1m7ba_ 128 LSNHRQTPVSYDQGANMAKQIG-AATYIECSALQSENSVRDIFHVATLA 175 (179)
T ss_dssp HHTTTCCCCCHHHHHHHHHHHT-CSEEEECBTTTBHHHHHHHHHHHHHH
T ss_pred HhhhhcCcchHHHHHHHHHHhC-CCeEEEEeCCCCCcCHHHHHHHHHHH
Confidence 11233444445443 3578999999998 699999976543
No 73
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=97.98 E-value=3.5e-06 Score=60.05 Aligned_cols=82 Identities=11% Similarity=0.003 Sum_probs=53.9
Q ss_pred ccceEEEEEeCCCCCCCCc---------CCCCCCCceeEEEEecCCCCCchhHhHHHHHHHHHhcC--------------
Q 030407 94 LADYIIYIIDVSGGDKIPR---------KGGPGITQADLLVINKTDLASAIGADLAVMERDALRMR-------------- 150 (178)
Q Consensus 94 ~ad~~I~VvD~~~~~~~~~---------~~~~qi~~adiiviNK~Dl~~~~~~~~~~~~~~l~~~n-------------- 150 (178)
..+.++.++|.+....... .....-..+.+++.||.|+... .....+.+.+....
T Consensus 80 ~~~~~~~~~d~~d~~~~~~~~~~~~~~~~~~~~~~~~~li~~~K~D~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 157 (186)
T d1f6ba_ 80 AINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEA--ISEERLREMFGLYGQTTGKGSVSLKELN 157 (186)
T ss_dssp GCSEEEEEEETTCGGGHHHHHHHHHHHHTCGGGTTSCEEEEEECTTSTTC--CCHHHHHHHHTCTTTCCCSSCCCTTTCC
T ss_pred ccceeeeeeeccCccchHHHHHHHHHhhcccccCCCceEEEEeccCcccc--CCHHHHHHHHhhcccchhhhhhhHHHhh
Confidence 3588999999876432110 0111123567999999999775 44444544443211
Q ss_pred -CCCCEEEEecccCCCHHHHHHHHhhhh
Q 030407 151 -DGGPFIFAQVGWVIGIIFTLSITHYIV 177 (178)
Q Consensus 151 -p~a~i~~~SA~~g~gi~el~~~l~~~~ 177 (178)
...+++++||++|+||+|+|++|.+++
T Consensus 158 ~~~~~~~~~SA~tg~Gi~e~~~~l~~~i 185 (186)
T d1f6ba_ 158 ARPLEVFMCSVLKRQGYGEGFRWMAQYI 185 (186)
T ss_dssp SCCEEEEECBTTTTBSHHHHHHHHHTTC
T ss_pred cCCCEEEEEeCCCCCCHHHHHHHHHHhh
Confidence 113689999999999999999998764
No 74
>d1puja_ c.37.1.8 (A:) Probable GTPase YlqF {Bacillus subtilis [TaxId: 1423]}
Probab=97.89 E-value=5.1e-06 Score=64.47 Aligned_cols=78 Identities=14% Similarity=0.030 Sum_probs=55.6
Q ss_pred ccceEEEEEeCCCCCCCCcC-CCCCC-CceeEEEEecCCCCCchhHhHHHHHHHHHhcCCCCCEEEEecccCCCHHHHHH
Q 030407 94 LADYIIYIIDVSGGDKIPRK-GGPGI-TQADLLVINKTDLASAIGADLAVMERDALRMRDGGPFIFAQVGWVIGIIFTLS 171 (178)
Q Consensus 94 ~ad~~I~VvD~~~~~~~~~~-~~~qi-~~adiiviNK~Dl~~~~~~~~~~~~~~l~~~np~a~i~~~SA~~g~gi~el~~ 171 (178)
.+|.++.|+|+..+...... ....+ ..+-++|+||+||++. ...+...++.+.. ..+.+.+|++++.|..++.+
T Consensus 15 ~~DvIl~V~DaR~P~ss~~~~l~~~~~~Kp~IlVlNK~DLv~~--~~~~~w~~~f~~~--~~~~i~isa~~~~~~~~~~~ 90 (273)
T d1puja_ 15 LIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADKADA--AVTQQWKEHFENQ--GIRSLSINSVNGQGLNQIVP 90 (273)
T ss_dssp GCSEEEEEEETTSTTTTSCHHHHHHCSSSCEEEEEECGGGSCH--HHHHHHHHHHHTT--TCCEEECCTTTCTTGGGHHH
T ss_pred hCCEEEEEEECCCCCCCCCHHHHHHHcCCCeEEEEECccCCch--HHHHHHHHHHHhc--CCccceeecccCCCccccch
Confidence 46999999999876543221 00011 3467999999999988 6666666666644 45789999999999988877
Q ss_pred HHhh
Q 030407 172 ITHY 175 (178)
Q Consensus 172 ~l~~ 175 (178)
.+.+
T Consensus 91 ~~~~ 94 (273)
T d1puja_ 91 ASKE 94 (273)
T ss_dssp HHHH
T ss_pred hhhh
Confidence 6544
No 75
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=97.75 E-value=2.3e-05 Score=55.62 Aligned_cols=78 Identities=21% Similarity=0.128 Sum_probs=44.6
Q ss_pred CHHHHHHhhcC-CcEEEEEecCC-Cc------hhHHHHHHcCCCCccceeecccCC-CcccccccccccCHhHHHhhHhh
Q 030407 1 MLALCKFLRDK-YSLAAVTNDIF-TK------EDGEFLMRNGALPEERIRAVETGG-CPHAAIREDISINLGPLEELSNL 71 (178)
Q Consensus 1 ~~~~~~~~~~~-~~vaVI~nd~g-~~------iD~~li~~~~~~~~~~~~~l~~Gc-Cc~l~i~~dl~~~l~~l~~l~~~ 71 (178)
+.+++++|+++ .|+|+|.||.+ .. -|..++...|. ....+.++| ||.. .++....+.....+...
T Consensus 18 i~~l~~~L~~~g~~v~vik~d~~~~~~~~~~~~ds~r~~~~g~----~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 91 (165)
T d1xjca_ 18 MEKWVAAAVREGWRVGTVKHHGHGGEPARPEGVDSVRHERAGA----VATAVEGDGLLQLH--LRRPLWRLDDVLALYAP 91 (165)
T ss_dssp HHHHHHHHHHTTCCEEEEECCC--------------------C----SEEEEEETTEEEEE--ECCSCCCHHHHHHHHGG
T ss_pred HHHHHHHHHhCCCeEEEEEeccCccccchhhccccHHHHhhcc----ccccccChHHHHHH--hhccccchhhHHHHHhh
Confidence 36788888765 99999999976 43 35555555554 566777888 5543 23223334333334445
Q ss_pred CCCCEEEEeCCcc
Q 030407 72 FKADLLLCESGGD 84 (178)
Q Consensus 72 ~~~d~iiiEttG~ 84 (178)
..+|+|++|+.+.
T Consensus 92 ~~~D~iivEg~~~ 104 (165)
T d1xjca_ 92 LRLDLVLVEGYKQ 104 (165)
T ss_dssp GCCSEEEEECCTT
T ss_pred cccCeEeeecccc
Confidence 6899999999994
No 76
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=97.75 E-value=7.4e-06 Score=60.96 Aligned_cols=91 Identities=13% Similarity=0.101 Sum_probs=53.0
Q ss_pred CCCCEEEEeCCcch-hh-hccc-ccccceEEEEEeCCCCCCCCcC----CCCCCCcee-EEEEecCCCCCchhHhHHHHH
Q 030407 72 FKADLLLCESGGDN-LA-ANFS-RELADYIIYIIDVSGGDKIPRK----GGPGITQAD-LLVINKTDLASAIGADLAVME 143 (178)
Q Consensus 72 ~~~d~iiiEttG~~-~~-~~~~-~~~ad~~I~VvD~~~~~~~~~~----~~~qi~~ad-iiviNK~Dl~~~~~~~~~~~~ 143 (178)
.+..+.||.|.|-. .. .+.. ...+|.+|+|+|+..|...+.. +......+- ++++||+|+++.. +..+.+.
T Consensus 65 ~~~~i~iiDtPGh~df~~~~~~~~~~aD~avlVvda~~Gv~~qt~~~~~~~~~~gi~~iiv~iNK~D~~~~~-~~~~~~~ 143 (204)
T d2c78a3 65 AKRHYSHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVFMNKVDMVDDP-ELLDLVE 143 (204)
T ss_dssp SSCEEEEEECCCSGGGHHHHHHHHTTCSSEEEEEETTTCCCHHHHHHHHHHHHTTCCCEEEEEECGGGCCCH-HHHHHHH
T ss_pred CCeEEEEEeCCCchhhHHHHHHHHHHCCEEEEEEECCCCCcHHHHHHHHHHHHcCCCeEEEEEEecccCCCH-HHHHHHH
Confidence 36789999999921 11 1111 1246999999999988654321 111123343 5569999998751 2233333
Q ss_pred ----HHHHhcC-C--CCCEEEEecccC
Q 030407 144 ----RDALRMR-D--GGPFIFAQVGWV 163 (178)
Q Consensus 144 ----~~l~~~n-p--~a~i~~~SA~~g 163 (178)
..+.... | ..++++.||..|
T Consensus 144 ~~i~~~l~~~~~~~~~i~~i~~sa~~~ 170 (204)
T d2c78a3 144 MEVRDLLNQYEFPGDEVPVIRGSALLA 170 (204)
T ss_dssp HHHHHHHHHTTSCTTTSCEEECCHHHH
T ss_pred HHHHHHHHhcCCCcccceeeeeechhh
Confidence 3333322 2 368899998643
No 77
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=97.63 E-value=4.3e-06 Score=63.72 Aligned_cols=78 Identities=9% Similarity=-0.049 Sum_probs=49.3
Q ss_pred cceEEEEEeCCCCCCCCc---CC---CCCCCceeEEEEecCCCCCchhHhHHHHHHHHHhc--CCCCCEEEEecccCCCH
Q 030407 95 ADYIIYIIDVSGGDKIPR---KG---GPGITQADLLVINKTDLASAIGADLAVMERDALRM--RDGGPFIFAQVGWVIGI 166 (178)
Q Consensus 95 ad~~I~VvD~~~~~~~~~---~~---~~qi~~adiiviNK~Dl~~~~~~~~~~~~~~l~~~--np~a~i~~~SA~~g~gi 166 (178)
.|.+++|+.+.+++.... ++ ...-...-+||+||+||.++ .+.+...+.+.+. ..+.+++.+||++|+|+
T Consensus 11 iD~~~iV~s~~~P~~~~~~idR~Lv~a~~~~i~pvIvlnK~DL~~~--~~~~~~~~~~~~~y~~~g~~v~~~Sa~~~~gl 88 (231)
T d1t9ha2 11 VDQAVLVFSAVQPSFSTALLDRFLVLVEANDIQPIICITKMDLIED--QDTEDTIQAYAEDYRNIGYDVYLTSSKDQDSL 88 (231)
T ss_dssp CCEEEEEEESTTTTCCHHHHHHHHHHHHTTTCEEEEEEECGGGCCC--HHHHHHHHHHHHHHHHHTCCEEECCHHHHTTC
T ss_pred cCEEEEEEECCCCCCCHHHHHHHHHHHHHcCCCEEEEEeccccccc--HHHHHHHHHHHHHHhhccccceeeecCChhHH
Confidence 477888888765532211 11 11123356999999999987 4433322222111 12579999999999999
Q ss_pred HHHHHHHh
Q 030407 167 IFTLSITH 174 (178)
Q Consensus 167 ~el~~~l~ 174 (178)
++|.+++.
T Consensus 89 ~~L~~~l~ 96 (231)
T d1t9ha2 89 ADIIPHFQ 96 (231)
T ss_dssp TTTGGGGT
T ss_pred HHHHHhhc
Confidence 99987765
No 78
>d1r5ba3 c.37.1.8 (A:215-459) Eukaryotic peptide chain release factor ERF2, G domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=97.60 E-value=8.6e-06 Score=62.36 Aligned_cols=98 Identities=14% Similarity=0.084 Sum_probs=55.3
Q ss_pred CCCEEEEeCCcch-hh-hccc-ccccceEEEEEeCCCCCCCCc-CCCCC----------CCce-eEEEEecCCCCCch--
Q 030407 73 KADLLLCESGGDN-LA-ANFS-RELADYIIYIIDVSGGDKIPR-KGGPG----------ITQA-DLLVINKTDLASAI-- 135 (178)
Q Consensus 73 ~~d~iiiEttG~~-~~-~~~~-~~~ad~~I~VvD~~~~~~~~~-~~~~q----------i~~a-diiviNK~Dl~~~~-- 135 (178)
...+-|+.|.|-. .. .... ...+|.+++|||+.+|...+. ....| +... -++++||+|+++..
T Consensus 101 ~~~i~~iDtPGH~df~~~~~~g~~~aD~ailVVda~~G~~~~~~~~~~QT~e~l~l~~~~~i~~iiv~iNKmD~~~~~~~ 180 (245)
T d1r5ba3 101 HRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGFERGGQTREHAVLARTQGINHLVVVINKMDEPSVQWS 180 (245)
T ss_dssp SEEEEECCCCC-----------TTSCSEEEEEEECSTTHHHHTTSTTCCHHHHHHHHHHTTCSSEEEEEECTTSTTCSSC
T ss_pred cceeeeecccccccchhhhhhhhhhhcceeeEEEcCCCccCCccccccchHHHHHHHHHcCCCeEEEEEEcCCCCccchh
Confidence 3568889999921 11 1111 124699999999988642111 11112 1222 36889999997431
Q ss_pred hHh----HHHHHHHHHhc---CC--CCCEEEEecccCCCHHHHH
Q 030407 136 GAD----LAVMERDALRM---RD--GGPFIFAQVGWVIGIIFTL 170 (178)
Q Consensus 136 ~~~----~~~~~~~l~~~---np--~a~i~~~SA~~g~gi~el~ 170 (178)
... .+++...++++ ++ ..+++++||++|+||.+++
T Consensus 181 e~~~~ei~~~l~~~l~~i~~~~~~~~v~~VPiSA~~G~nI~~~~ 224 (245)
T d1r5ba3 181 EERYKECVDKLSMFLRRVAGYNSKTDVKYMPVSAYTGQNVKDRV 224 (245)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCHHHHEEEEECBTTTTBTTSSCC
T ss_pred HHHHHHHHHHHHHHHHHHhCcCcccCCEEEEeeccCCCCcccch
Confidence 011 22333333333 22 2479999999999998753
No 79
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=97.17 E-value=0.00034 Score=54.19 Aligned_cols=61 Identities=15% Similarity=0.139 Sum_probs=38.6
Q ss_pred CCCEEEEeCCcch-hh-hccc-ccccceEEEEEeCCCCCCCCcC----CCCCCCceeEEEEecCCCCC
Q 030407 73 KADLLLCESGGDN-LA-ANFS-RELADYIIYIIDVSGGDKIPRK----GGPGITQADLLVINKTDLAS 133 (178)
Q Consensus 73 ~~d~iiiEttG~~-~~-~~~~-~~~ad~~I~VvD~~~~~~~~~~----~~~qi~~adiiviNK~Dl~~ 133 (178)
+..+-|+.|.|-. .. .... ...+|..|+|+|+..|...+.. .......+-++++||.|...
T Consensus 70 ~~~~n~iDtPG~~dF~~e~~~~l~~~D~avlVvda~~Gv~~~T~~~w~~a~~~~lP~i~fINKmDr~~ 137 (276)
T d2bv3a2 70 DHRINIIDAPGHVDFTIEVERSMRVLDGAIVVFDSSQGVEPQSETVWRQAEKYKVPRIAFANKMDKTG 137 (276)
T ss_dssp TEEEEEECCCSSSSCSTTHHHHHHHCCEEEEEEETTTSSCHHHHHHHHHHHTTTCCEEEEEECTTSTT
T ss_pred CeEEEEecCCchhhhHHHHHHHHHhhhheEEeccccCCcchhHHHHHHHHHHcCCCEEEEEecccccc
Confidence 5678899999921 00 0100 1136999999999998754321 11224556799999999853
No 80
>d1jnya3 c.37.1.8 (A:4-227) Elongation factor eEF-1alpha, N-terminal (G) domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=97.16 E-value=0.00013 Score=54.60 Aligned_cols=96 Identities=13% Similarity=0.092 Sum_probs=54.5
Q ss_pred CCCEEEEeCCcch-hhh-cc-cccccceEEEEEeCCCCCCCCc-CCCCC----------CCc-eeEEEEecCCCCCch--
Q 030407 73 KADLLLCESGGDN-LAA-NF-SRELADYIIYIIDVSGGDKIPR-KGGPG----------ITQ-ADLLVINKTDLASAI-- 135 (178)
Q Consensus 73 ~~d~iiiEttG~~-~~~-~~-~~~~ad~~I~VvD~~~~~~~~~-~~~~q----------i~~-adiiviNK~Dl~~~~-- 135 (178)
++.+-||.|.|-. ... +. ....+|+.++|||+.+|...+. ...+| +.. .-++++||+|+..+.
T Consensus 80 ~~~i~iiDtPGH~df~~~~~~g~~~~D~allVVda~~G~~~~t~~~~~qt~e~l~~~~~~~~~~iIv~iNK~D~~~~~~~ 159 (224)
T d1jnya3 80 KYFFTIIDAPGHRDFVKNMITGASQADAAILVVSAKKGEYEAGMSVEGQTREHIILAKTMGLDQLIVAVNKMDLTEPPYD 159 (224)
T ss_dssp SCEEEECCCSSSTTHHHHHHHTSSCCSEEEEEEECSTTHHHHHHSTTCHHHHHHHHHHHTTCTTCEEEEECGGGSSSTTC
T ss_pred CceeEEeeCCCcHHHHHHHHHHHHhhceEEEEEecccCcccccccccchhHHHHHHHHHhCCCceEEEEEcccCCCcccc
Confidence 4667889999921 111 11 1124699999999998742110 01111 112 237779999997531
Q ss_pred hHhHHHHHHHHHh----cC---CCCCEEEEecccCCCHHH
Q 030407 136 GADLAVMERDALR----MR---DGGPFIFAQVGWVIGIIF 168 (178)
Q Consensus 136 ~~~~~~~~~~l~~----~n---p~a~i~~~SA~~g~gi~e 168 (178)
....+.+...++. .. ...+++++||.+|.|+.+
T Consensus 160 ~~~~~~v~~~i~~~~~~~~~~~~~i~~IPISA~~G~NV~~ 199 (224)
T d1jnya3 160 EKRYKEIVDQVSKFMRSYGFNTNKVRFVPVVAPSGDNITH 199 (224)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCTTCEEEECBTTTTBTTTB
T ss_pred HHHHHHHHHHHHhHHHhcCCCcccCeEEEEEccCCCCccc
Confidence 1223333333332 21 345789999999999854
No 81
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=97.14 E-value=0.00029 Score=52.51 Aligned_cols=147 Identities=15% Similarity=0.089 Sum_probs=81.7
Q ss_pred HHHHHHhhcC-CcEEEEEecCC-C-chhHHHH--HHcCCCCccceeecccCCCcccccccccccCH-hHHHhhHhhCCCC
Q 030407 2 LALCKFLRDK-YSLAAVTNDIF-T-KEDGEFL--MRNGALPEERIRAVETGGCPHAAIREDISINL-GPLEELSNLFKAD 75 (178)
Q Consensus 2 ~~~~~~~~~~-~~vaVI~nd~g-~-~iD~~li--~~~~~~~~~~~~~l~~GcCc~l~i~~dl~~~l-~~l~~l~~~~~~d 75 (178)
.++..+++++ +||++|..|.. . .++.... +..|+ ++....+.. |+...+ +++. .....++|
T Consensus 30 AKLA~~~~~~g~kV~lit~Dt~R~ga~eQL~~~a~~l~v----~~~~~~~~~--------~~~~~~~~a~~-~~~~~~~d 96 (211)
T d1j8yf2 30 GKLAYFYKKKGFKVGLVGADVYRPAALEQLQQLGQQIGV----PVYGEPGEK--------DVVGIAKRGVE-KFLSEKME 96 (211)
T ss_dssp HHHHHHHHHTTCCEEEEECCCSSHHHHHHHHHHHHHHTC----CEECCTTCC--------CHHHHHHHHHH-HHHHTTCS
T ss_pred HHHHHHHHHCCCceEEEEeeccccchhHHHHHhccccCc----ceeecccch--------hhhHHHHHHHH-HhhccCCc
Confidence 3566667654 99999999988 4 5544221 22244 333332222 222222 2332 22356899
Q ss_pred EEEEeCCcchhhh-------c---c-cccccceEEEEEeCCCCCCCCcCCCCC--CCceeEEEEecCCCCCchhHhHHHH
Q 030407 76 LLLCESGGDNLAA-------N---F-SRELADYIIYIIDVSGGDKIPRKGGPG--ITQADLLVINKTDLASAIGADLAVM 142 (178)
Q Consensus 76 ~iiiEttG~~~~~-------~---~-~~~~ad~~I~VvD~~~~~~~~~~~~~q--i~~adiiviNK~Dl~~~~~~~~~~~ 142 (178)
+|||.|.|.+-.. . + .....+-+++|+|++.+.+........ ....+-++++|.|-... ...+
T Consensus 97 ~IlIDTaGr~~~~~~~~~~~el~~~~~~~~~~~~~LVl~a~~~~~~~~~~~~~~~~~~~~~lI~TKlDet~~----~G~~ 172 (211)
T d1j8yf2 97 IIIVDTAGRHGYGEEAALLEEMKNIYEAIKPDEVTLVIDASIGQKAYDLASKFNQASKIGTIIITKMDGTAK----GGGA 172 (211)
T ss_dssp EEEEECCCSCCTTCHHHHHHHHHHHHHHHCCSEEEEEEEGGGGGGHHHHHHHHHHHCTTEEEEEECTTSCSC----HHHH
T ss_pred eEEEecCCcCccchhhHHHHHHHHHHhhcCCceEEEEEecccCcchHHHHhhhhcccCcceEEEecccCCCc----ccHH
Confidence 9999999942100 0 0 001136788999997764332111000 11235688999998655 3455
Q ss_pred HHHHHhcCCCCCEEEEecccCCCHHHH
Q 030407 143 ERDALRMRDGGPFIFAQVGWVIGIIFT 169 (178)
Q Consensus 143 ~~~l~~~np~a~i~~~SA~~g~gi~el 169 (178)
.+...+. ..|+.++| +|+++++|
T Consensus 173 l~~~~~~--~lPi~~it--~Gq~v~DL 195 (211)
T d1j8yf2 173 LSAVAAT--GATIKFIG--TGEKIDEL 195 (211)
T ss_dssp HHHHHTT--TCCEEEEE--CSSSTTCE
T ss_pred HHHHHHH--CcCEEEEe--CCCCcccC
Confidence 5555543 46888887 58888653
No 82
>d1f60a3 c.37.1.8 (A:2-240) Elongation factor eEF-1alpha, N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.08 E-value=4.3e-05 Score=58.13 Aligned_cols=94 Identities=14% Similarity=0.047 Sum_probs=54.4
Q ss_pred CCCEEEEeCCcch-hh-hcc-cccccceEEEEEeCCCCCC-------CCc-C---CCCCCCcee-EEEEecCCCCCchhH
Q 030407 73 KADLLLCESGGDN-LA-ANF-SRELADYIIYIIDVSGGDK-------IPR-K---GGPGITQAD-LLVINKTDLASAIGA 137 (178)
Q Consensus 73 ~~d~iiiEttG~~-~~-~~~-~~~~ad~~I~VvD~~~~~~-------~~~-~---~~~qi~~ad-iiviNK~Dl~~~~~~ 137 (178)
+..+.||+|.|-. .. .+. ....+|..|+|+|+..|.. .+. . ....+...- ++++||+|+.+...+
T Consensus 83 ~~~i~iiDtPGH~df~~~~~~g~~~~D~ailvvda~~G~~e~g~~~~~QT~eh~~~~~~~gv~~iiv~iNKmD~~~~d~~ 162 (239)
T d1f60a3 83 KYQVTVIDAPGHRDFIKNMITGTSQADCAILIIAGGVGEFEAGISKDGQTREHALLAFTLGVRQLIVAVNKMDSVKWDES 162 (239)
T ss_dssp SEEEEEEECCCCTTHHHHHHHSSSCCSEEEEEEECSHHHHHHHTCTTSHHHHHHHHHHHTTCCEEEEEEECGGGGTTCHH
T ss_pred CEEEEEEECCCcHHHHHHHHHHHHHhCEEEEEEECCCCccccccCchHhHHHHHHHHHHcCCCeEEEEEECCCCCCCCHH
Confidence 3468999999920 11 111 1123699999999987521 110 0 011123333 668999999875222
Q ss_pred hH----HHHHHHHHhcCC---CCCEEEEecccCCCH
Q 030407 138 DL----AVMERDALRMRD---GGPFIFAQVGWVIGI 166 (178)
Q Consensus 138 ~~----~~~~~~l~~~np---~a~i~~~SA~~g~gi 166 (178)
.. +.+...+..... ..+++++||++|.|+
T Consensus 163 ~~~~~~~el~~~l~~~~~~~~~i~~ipiSa~~G~ni 198 (239)
T d1f60a3 163 RFQEIVKETSNFIKKVGYNPKTVPFVPISGWNGDNM 198 (239)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEECCTTTCBTT
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEEEEccCCCcc
Confidence 22 334444443332 367899999999987
No 83
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Probab=96.84 E-value=0.00057 Score=52.64 Aligned_cols=60 Identities=15% Similarity=0.206 Sum_probs=37.8
Q ss_pred CCCEEEEeCCcch-hh-hccc-ccccceEEEEEeCCCCCCCCcC----CCCCCCceeEEEEecCCCC
Q 030407 73 KADLLLCESGGDN-LA-ANFS-RELADYIIYIIDVSGGDKIPRK----GGPGITQADLLVINKTDLA 132 (178)
Q Consensus 73 ~~d~iiiEttG~~-~~-~~~~-~~~ad~~I~VvD~~~~~~~~~~----~~~qi~~adiiviNK~Dl~ 132 (178)
+..+-||.|.|-. .. .+.. ...+|+.|+|+|+..|...+.. ...+...+-++++||+|..
T Consensus 66 ~~~~n~iDtPGh~dF~~e~~~al~~~D~avlvvda~~Gv~~~t~~~~~~~~~~~~p~~i~iNk~D~~ 132 (267)
T d2dy1a2 66 GHRVFLLDAPGYGDFVGEIRGALEAADAALVAVSAEAGVQVGTERAWTVAERLGLPRMVVVTKLDKG 132 (267)
T ss_dssp TEEEEEEECCCSGGGHHHHHHHHHHCSEEEEEEETTTCSCHHHHHHHHHHHHTTCCEEEEEECGGGC
T ss_pred ccceeEEccCchhhhhhhhhhhhcccCceEEEeeccCCccchhHHHHHhhhhccccccccccccccc
Confidence 3457899999921 11 1111 1236999999999988654321 1122345679999999975
No 84
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=96.72 E-value=0.0015 Score=46.21 Aligned_cols=103 Identities=15% Similarity=0.106 Sum_probs=58.4
Q ss_pred CCCEEEEeCCcch----hhhcccccccceEEEEEeCCCCCCCCcCCC------------------C-CCCceeEEEEecC
Q 030407 73 KADLLLCESGGDN----LAANFSRELADYIIYIIDVSGGDKIPRKGG------------------P-GITQADLLVINKT 129 (178)
Q Consensus 73 ~~d~iiiEttG~~----~~~~~~~~~ad~~I~VvD~~~~~~~~~~~~------------------~-qi~~adiiviNK~ 129 (178)
.+..-+.++.|.. +...+. ..++++++++|.+.......... . .-..+-+++.||+
T Consensus 41 ~~~~~i~D~~Gq~~~~~~~~~~~-~~~~~~i~v~d~~~~~~~~~~~~~~~~~~e~~~~~~~i~~~~~~~~~~~~lv~Nk~ 119 (195)
T d1svsa1 41 DLHFKMFDVGGQRSERKKWIHCF-EGVTAIIFCVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTDTSIILFLNKK 119 (195)
T ss_dssp TEEEEEEEECCSGGGGGGGGGGC-TTCSEEEEEEEGGGGGCBCSSCTTSBHHHHHHHHHHHHHTCGGGTTSEEEEEEECH
T ss_pred eeeeeeeccccccccccchhhcc-cCCceeeeEEeecccchHHHHhhhhHHHHHHHHHHHHHhcccccCCCCEEEEeccc
Confidence 4556678888831 112222 35799999999876543221000 0 1123679999999
Q ss_pred CCCCc-------------------hhHhHHHHHHHHHhcCC-----CCCEEEEecccCCCHHHHHHHHhhh
Q 030407 130 DLASA-------------------IGADLAVMERDALRMRD-----GGPFIFAQVGWVIGIIFTLSITHYI 176 (178)
Q Consensus 130 Dl~~~-------------------~~~~~~~~~~~l~~~np-----~a~i~~~SA~~g~gi~el~~~l~~~ 176 (178)
|+... ..+....+.....+.+. ..++++|||++|++|+++|+.+...
T Consensus 120 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~tSA~~~~nv~~~F~~v~~~ 190 (195)
T d1svsa1 120 DLFEEKIKKSPLTICYPEYAGSNTYEEAAAYIQCQFEDLNKRKDTKEIYTHFTCATDTKNVQFVFDAVTDV 190 (195)
T ss_dssp HHHHHHTTTSCGGGTCTTCCSCSSHHHHHHHHHHHHHTTCSCTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred hhhhhhccchHHHHHhhhhcCcccHHHHHHHHHHHHHHHhcccCCCcceeEEEEeECCHhHHHHHHHHHHH
Confidence 96311 00111122233333321 1245679999999999999987654
No 85
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=96.67 E-value=0.0013 Score=48.95 Aligned_cols=148 Identities=17% Similarity=0.114 Sum_probs=82.2
Q ss_pred HHHHHHhhcC-CcEEEEEecCC-C-chhHHHH--HHcCCCCccceeecccCCCcccccccccccCHhHHHhhHhhCCCCE
Q 030407 2 LALCKFLRDK-YSLAAVTNDIF-T-KEDGEFL--MRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKADL 76 (178)
Q Consensus 2 ~~~~~~~~~~-~~vaVI~nd~g-~-~iD~~li--~~~~~~~~~~~~~l~~GcCc~l~i~~dl~~~l~~l~~l~~~~~~d~ 76 (178)
.++..+++++ +||++|.-|-. . .++.... +..|+ ++....++ +|+...+....+..+..++|+
T Consensus 27 AKLA~~~~~~g~kV~lit~Dt~R~gA~eQL~~~a~~l~v----~~~~~~~~--------~d~~~~l~~~~~~a~~~~~d~ 94 (211)
T d2qy9a2 27 GKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNI----PVIAQHTG--------ADSASVIFDAIQAAKARNIDV 94 (211)
T ss_dssp HHHHHHHHTTTCCEEEECCCTTCHHHHHHHHHHHHHTTC----CEECCSTT--------CCHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHCCCcEEEEecccccccchhhhhhhhhhcCC----cccccccC--------CCHHHHHHHHHHHHHHcCCCE
Confidence 4666677654 99999999987 4 5665422 23344 33333322 222222222222233568999
Q ss_pred EEEeCCcchhh-----h-------cc---cccccceEEEEEeCCCCCCCCcCCCCC--CCceeEEEEecCCCCCchhHhH
Q 030407 77 LLCESGGDNLA-----A-------NF---SRELADYIIYIIDVSGGDKIPRKGGPG--ITQADLLVINKTDLASAIGADL 139 (178)
Q Consensus 77 iiiEttG~~~~-----~-------~~---~~~~ad~~I~VvD~~~~~~~~~~~~~q--i~~adiiviNK~Dl~~~~~~~~ 139 (178)
|||.|.|-+.. . .. .....+-.++|+|++.+.+........ .-..+-++++|.|-....
T Consensus 95 ilIDTaGr~~~d~~~~~el~~l~~~~~~~~~~~p~~~~LVl~a~~~~~~~~~~~~~~~~~~~~~lIlTKlDe~~~~---- 170 (211)
T d2qy9a2 95 LIADTAGRLQNKSHLMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQNAVSQAKLFHEAVGLTGITLTKLDGTAKG---- 170 (211)
T ss_dssp EEECCCCCGGGHHHHHHHHHHHHHHHTTTCTTCCSEEEEEEEGGGTHHHHHHHHHHHHHSCCCEEEEECCTTCTTT----
T ss_pred EEeccCCCccccHHHHHHHHHHHHHHhhhcccCcceeeeehhcccCcchHHHHhhhhhccCCceEEEeecCCCCCc----
Confidence 99999994211 0 00 000125788999998764321110000 112478999999986542
Q ss_pred HHHHHHHHhcCCCCCEEEEecccCCCHHHH
Q 030407 140 AVMERDALRMRDGGPFIFAQVGWVIGIIFT 169 (178)
Q Consensus 140 ~~~~~~l~~~np~a~i~~~SA~~g~gi~el 169 (178)
..+.....+. ..|+.+++ +|+++++|
T Consensus 171 G~~l~~~~~~--~~Pi~~i~--~Gq~v~Dl 196 (211)
T d2qy9a2 171 GVIFSVADQF--GIPIRYIG--VGERIEDL 196 (211)
T ss_dssp THHHHHHHHH--CCCEEEEE--CSSSGGGE
T ss_pred cHHHHHHHHH--CCCEEEEe--CCCCcccC
Confidence 3344444433 45888888 78888553
No 86
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=96.51 E-value=0.0013 Score=45.57 Aligned_cols=81 Identities=11% Similarity=-0.013 Sum_probs=38.3
Q ss_pred HHHHHHhhcC-CcEEEEEecCC-CchhHHHHHHcCCC--CccceeecccCC-CcccccccccccCH-hHHHhhHhhCCCC
Q 030407 2 LALCKFLRDK-YSLAAVTNDIF-TKEDGEFLMRNGAL--PEERIRAVETGG-CPHAAIREDISINL-GPLEELSNLFKAD 75 (178)
Q Consensus 2 ~~~~~~~~~~-~~vaVI~nd~g-~~iD~~li~~~~~~--~~~~~~~l~~Gc-Cc~l~i~~dl~~~l-~~l~~l~~~~~~d 75 (178)
++++++|.++ .|++++.||++ ...|.....+.... ..+.+.....++ ||......+..... ..+..+ ....+|
T Consensus 20 ~~L~~~l~~~g~~v~v~~~d~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d 98 (170)
T d1np6a_ 20 KKLIPALCARGIRPGLIKHTHHDMDVDKPGKDSYELRKAGAAQTIVASQQRWALMTETPDEEELDLQFLASRM-DTSKLD 98 (170)
T ss_dssp HHHHHHHHHTTCCEEEEEECCC------------CHHHHTCSEEEEECSSEEEEEEECSSSCCCCHHHHHHHS-CGGGCS
T ss_pred HHHHHHHHHCCCeEEEecccccccccccccCccHHHHHhhhhheeeecCcceEEEeecccccccchHHHHHHh-cccccC
Confidence 5778888664 99999999999 66655443321110 012444554444 33321111111111 222222 234689
Q ss_pred EEEEeCCc
Q 030407 76 LLLCESGG 83 (178)
Q Consensus 76 ~iiiEttG 83 (178)
++++|+.+
T Consensus 99 ~~~ve~~~ 106 (170)
T d1np6a_ 99 LILVEGFK 106 (170)
T ss_dssp EEEEESCS
T ss_pred ceeEeecc
Confidence 99999998
No 87
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=96.33 E-value=0.0025 Score=47.27 Aligned_cols=148 Identities=15% Similarity=0.077 Sum_probs=80.1
Q ss_pred HHHHHHhhc-CCcEEEEEecCC-C-chhHHHH--HHcCCCCccceeecccCCCcccccccccccCHhHHHhhHhhCCCCE
Q 030407 2 LALCKFLRD-KYSLAAVTNDIF-T-KEDGEFL--MRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKADL 76 (178)
Q Consensus 2 ~~~~~~~~~-~~~vaVI~nd~g-~-~iD~~li--~~~~~~~~~~~~~l~~GcCc~l~i~~dl~~~l~~l~~l~~~~~~d~ 76 (178)
.++..++.+ ++||++|.-|-- . .++.... +..++ ++....++ +|+...+.....+....++|+
T Consensus 29 AKLAa~~~~~~~kV~lit~Dt~R~gA~eQL~~~a~~l~i----~~~~~~~~--------~d~~~~~~~~~~~~~~~~~d~ 96 (213)
T d1vmaa2 29 GKLAKMFVDEGKSVVLAAADTFRAAAIEQLKIWGERVGA----TVISHSEG--------ADPAAVAFDAVAHALARNKDV 96 (213)
T ss_dssp HHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHTC----EEECCSTT--------CCHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHCCCceEEEeecccccchhHHHHHHhhhcCc----cccccCCC--------CcHHHHHHHHHHHHHHcCCCE
Confidence 356666655 499999999977 4 5554322 22343 33332222 122221222223333568999
Q ss_pred EEEeCCcchhh---------hc------ccccccceEEEEEeCCCCCCCCcCCC--CCCCceeEEEEecCCCCCchhHhH
Q 030407 77 LLCESGGDNLA---------AN------FSRELADYIIYIIDVSGGDKIPRKGG--PGITQADLLVINKTDLASAIGADL 139 (178)
Q Consensus 77 iiiEttG~~~~---------~~------~~~~~ad~~I~VvD~~~~~~~~~~~~--~qi~~adiiviNK~Dl~~~~~~~~ 139 (178)
|||.|.|.+.. .. ..+...+-.++|+|++.+........ .+.-..+-++++|.|-....
T Consensus 97 ilIDTaGr~~~d~~~~~el~~~~~~~~~~~~~~p~~~~LVl~a~~~~~~~~~~~~~~~~~~~~~lI~TKlDe~~~~---- 172 (213)
T d1vmaa2 97 VIIDTAGRLHTKKNLMEELRKVHRVVKKKIPDAPHETLLVIDATTGQNGLVQAKIFKEAVNVTGIILTKLDGTAKG---- 172 (213)
T ss_dssp EEEEECCCCSCHHHHHHHHHHHHHHGGGTCTTCCSEEEEEEEGGGHHHHHHHHHHHHHHSCCCEEEEECGGGCSCT----
T ss_pred EEEeccccccchHHHHHHHHHHHhhhhhccccccceeEEeeccccCcchhhhhhhhccccCCceEEEecccCCCcc----
Confidence 99999994210 00 01111256889999976532111000 01123578999999976542
Q ss_pred HHHHHHHHhcCCCCCEEEEecccCCCHHHH
Q 030407 140 AVMERDALRMRDGGPFIFAQVGWVIGIIFT 169 (178)
Q Consensus 140 ~~~~~~l~~~np~a~i~~~SA~~g~gi~el 169 (178)
..+.....+. ..|+.+++ +|+++++|
T Consensus 173 G~~l~~~~~~--~~Pi~~i~--~Gq~v~Dl 198 (213)
T d1vmaa2 173 GITLAIAREL--GIPIKFIG--VGEKAEDL 198 (213)
T ss_dssp THHHHHHHHH--CCCEEEEE--CSSSGGGE
T ss_pred cHHHHHHHHH--CCCEEEEe--CCCCcccC
Confidence 3344444433 45888887 68887553
No 88
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=96.12 E-value=0.0031 Score=46.53 Aligned_cols=147 Identities=13% Similarity=0.038 Sum_probs=79.6
Q ss_pred HHHHHHhhc-CCcEEEEEecCC-C-chhHHHH--HHcCCCCccceeecccCCCcccccccccccCHhHHHhhHhhCCCCE
Q 030407 2 LALCKFLRD-KYSLAAVTNDIF-T-KEDGEFL--MRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKADL 76 (178)
Q Consensus 2 ~~~~~~~~~-~~~vaVI~nd~g-~-~iD~~li--~~~~~~~~~~~~~l~~GcCc~l~i~~dl~~~l~~l~~l~~~~~~d~ 76 (178)
.++..++.+ ++||++|.-|.. . .++.... +..|+ ++....++. |+...+.......+..++|+
T Consensus 24 aKLA~~~~~~g~kV~lit~Dt~R~gA~eQL~~~a~~l~i----~~~~~~~~~--------d~~~~~~~~~~~~~~~~~d~ 91 (207)
T d1okkd2 24 AKLGRYYQNLGKKVMFCAGDTFRAAGGTQLSEWGKRLSI----PVIQGPEGT--------DPAALAYDAVQAMKARGYDL 91 (207)
T ss_dssp HHHHHHHHTTTCCEEEECCCCSSTTHHHHHHHHHHHHTC----CEECCCTTC--------CHHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHCCCcEEEEEeccccccchhhHhhcccccCc----eEEeccCCc--------cHHHHHHHHHHHHHHCCCCE
Confidence 356677765 499999999977 4 6665422 22243 333333222 22221211122233457999
Q ss_pred EEEeCCcchhh-----h---cc-------cccccceEEEEEeCCCCCCCCcCCCCC--CCceeEEEEecCCCCCchhHhH
Q 030407 77 LLCESGGDNLA-----A---NF-------SRELADYIIYIIDVSGGDKIPRKGGPG--ITQADLLVINKTDLASAIGADL 139 (178)
Q Consensus 77 iiiEttG~~~~-----~---~~-------~~~~ad~~I~VvD~~~~~~~~~~~~~q--i~~adiiviNK~Dl~~~~~~~~ 139 (178)
|||.|.|.+.. . .+ .....+-.++|+|++.+.+........ .-..+-++++|.|-....
T Consensus 92 ilIDTaGr~~~d~~l~~el~~~~~~~~~~~~~~p~~~~LVl~a~~~~~~~~~~~~~~~~~~~~~lI~TKlDet~~~---- 167 (207)
T d1okkd2 92 LFVDTAGRLHTKHNLMEELKKVKRAIAKADPEEPKEVWLVLDAVTGQNGLEQAKKFHEAVGLTGVIVTKLDGTAKG---- 167 (207)
T ss_dssp EEECCCCCCTTCHHHHHHHHHHHHHHHHHCTTCCSEEEEEEETTBCTHHHHHHHHHHHHHCCSEEEEECTTSSCCC----
T ss_pred EEcCccccchhhHHHHHHHHHHHHHhhhcccCCCceEEEEeecccCchHHHHHHHhhhccCCceEEEeccCCCCCc----
Confidence 99999994211 0 01 011125689999998765322111000 112478999999976542
Q ss_pred HHHHHHHHhcCCCCCEEEEecccCCCHHH
Q 030407 140 AVMERDALRMRDGGPFIFAQVGWVIGIIF 168 (178)
Q Consensus 140 ~~~~~~l~~~np~a~i~~~SA~~g~gi~e 168 (178)
..+.+...+. ..|+.++| +|++.++
T Consensus 168 G~~l~~~~~~--~~Pi~~i~--~Gq~p~D 192 (207)
T d1okkd2 168 GVLIPIVRTL--KVPIKFVG--VGEGPDD 192 (207)
T ss_dssp TTHHHHHHHH--CCCEEEEE--CSSSTTC
T ss_pred cHHHHHHHHH--CCCEEEEe--CCCChHh
Confidence 2333344433 45787777 4776543
No 89
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.00 E-value=0.0033 Score=45.34 Aligned_cols=104 Identities=15% Similarity=0.068 Sum_probs=55.3
Q ss_pred CCCCEEEEeCCcch-hhh---cccccccceEEEEEeCCCCCCCCc----CC-------C-CCCCceeEEEEecCCCCCch
Q 030407 72 FKADLLLCESGGDN-LAA---NFSRELADYIIYIIDVSGGDKIPR----KG-------G-PGITQADLLVINKTDLASAI 135 (178)
Q Consensus 72 ~~~d~iiiEttG~~-~~~---~~~~~~ad~~I~VvD~~~~~~~~~----~~-------~-~qi~~adiiviNK~Dl~~~~ 135 (178)
....+-++.+.|.. ... ......++.+++|+|++....... .. . ..-..+-+|++||+|+.++
T Consensus 45 ~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~~i~v~D~~d~~~~~~~~~~~l~~~l~~~~~~~~~~pilvv~NK~Dl~~a- 123 (207)
T d2fh5b1 45 RGNSLTLIDLPGHESLRFQLLDRFKSSARAVVFVVDSAAFQREVKDVAEFLYQVLIDSMALKNSPSLLIACNKQDIAMA- 123 (207)
T ss_dssp TCCEEEEEECCCCHHHHHHHHHHHGGGEEEEEEEEETTTHHHHHHHHHHHHHHHHHHHHTSTTCCEEEEEEECTTSTTC-
T ss_pred eeeeeeeeeccccccccchhhhhhhhhccccceEEEcccccccHHHHHHHHHHHHHhHHHhhcCCcEEEEEECcccCCC-
Confidence 35667778888831 111 111234688999999976432100 00 0 0012356788999999865
Q ss_pred hHhHHHHHHHHH----hc---------------------------------CCCCCEEEEecccCCC------HHHHHHH
Q 030407 136 GADLAVMERDAL----RM---------------------------------RDGGPFIFAQVGWVIG------IIFTLSI 172 (178)
Q Consensus 136 ~~~~~~~~~~l~----~~---------------------------------np~a~i~~~SA~~g~g------i~el~~~ 172 (178)
...+.+.+.++ .. .....++..|+++|.| ++++-+|
T Consensus 124 -~~~~~i~~~l~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~S~~~~~~~~~~~~i~~~~~w 202 (207)
T d2fh5b1 124 -KSAKLIQQQLEKELNTLRVTRSAAPSTLDSSSTAPAQLGKKGKEFEFSQLPLKVEFLECSAKGGRGDTGSADIQDLEKW 202 (207)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHCC------------CCCSSCTTSCCCGGGSSSCEEEEECBCC-------CCBCHHHHHH
T ss_pred -CCHHHHHHHHHHHhhhhhhccccccceeehhhhhhhhhcccchhhhHHhccCCcEEEEeeecCCCcccccccHHHHHHH
Confidence 22222222221 10 0112578899999998 8888888
Q ss_pred Hhhhh
Q 030407 173 THYIV 177 (178)
Q Consensus 173 l~~~~ 177 (178)
|.++|
T Consensus 203 l~~~a 207 (207)
T d2fh5b1 203 LAKIA 207 (207)
T ss_dssp HHHHC
T ss_pred HHHhC
Confidence 87765
No 90
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.76 E-value=0.0039 Score=44.09 Aligned_cols=102 Identities=15% Similarity=0.079 Sum_probs=57.4
Q ss_pred CCCEEEEeCCcchh----hhcccccccceEEEEEeCCCCCCCCcC-------------------CCCCCCceeEEEEecC
Q 030407 73 KADLLLCESGGDNL----AANFSRELADYIIYIIDVSGGDKIPRK-------------------GGPGITQADLLVINKT 129 (178)
Q Consensus 73 ~~d~iiiEttG~~~----~~~~~~~~ad~~I~VvD~~~~~~~~~~-------------------~~~qi~~adiiviNK~ 129 (178)
....-+.++.|... ...+. ..++.++.++|.+........ ....-..+-+++.||.
T Consensus 44 ~~~~~~~d~~g~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~l~~~~~~~~~~~~v~NK~ 122 (200)
T d2bcjq2 44 SVIFRMVDVGGQRSERRKWIHCF-ENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKK 122 (200)
T ss_dssp SCEEEEEECCCSTTGGGGGGGGC-SSCSEEEEEEEGGGGGCBCSSCTTSBHHHHHHHHHHHHHHCGGGSSSEEEEEEECH
T ss_pred ceeeeeccccccccccccccccc-cccceeeEeeeccchhhhhhhhccccchHHHHHHHHHHHhhhhccCccEEEecchh
Confidence 45566777877311 12222 246889999998764321110 0001234679999999
Q ss_pred CCCCchh----------------HhHH----HHHHHHHhcCCC----CCEEEEecccCCCHHHHHHHHhh
Q 030407 130 DLASAIG----------------ADLA----VMERDALRMRDG----GPFIFAQVGWVIGIIFTLSITHY 175 (178)
Q Consensus 130 Dl~~~~~----------------~~~~----~~~~~l~~~np~----a~i~~~SA~~g~gi~el~~~l~~ 175 (178)
|+..... ...+ .+.....+.++. ..+++|||++|+||+++|+.+.+
T Consensus 123 Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~~~~~~~~~~tSAk~~~ni~~vF~~i~~ 192 (200)
T d2bcjq2 123 DLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKD 192 (200)
T ss_dssp HHHHHHTTTSCHHHHSTTCCSCSSCHHHHHHHHHHHHHTTCSCTTSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred hhhhhcccchHHHHhcccccCCchhHHHHHHHHHHHHHHhcccCCCceEEEEeEEEcCHhHHHHHHHHHH
Confidence 9842200 0111 122222233321 23678999999999999988754
No 91
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.46 E-value=0.0028 Score=45.12 Aligned_cols=103 Identities=15% Similarity=0.035 Sum_probs=56.0
Q ss_pred CCCEEEEeCCcchhh---hcccccccceEEEEEeCCCCCCCCcC-------------------CCCCCCceeEEEEecCC
Q 030407 73 KADLLLCESGGDNLA---ANFSRELADYIIYIIDVSGGDKIPRK-------------------GGPGITQADLLVINKTD 130 (178)
Q Consensus 73 ~~d~iiiEttG~~~~---~~~~~~~ad~~I~VvD~~~~~~~~~~-------------------~~~qi~~adiiviNK~D 130 (178)
...+-++.+.|...- .......++.++.++|.++....... ....-..+-++++||+|
T Consensus 43 ~~~~~~~D~~gq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~piilv~NK~D 122 (200)
T d1zcba2 43 NVPFKMVDVGGQRSERKRWFECFDSVTSILFLVSSSEFDQVLMEDRQTNRLTESLNIFETIVNNRVFSNVSIILFLNKTD 122 (200)
T ss_dssp TEEEEEEEECC-------CTTSCTTCCEEEEEEETTCTTCEETTEEEEEHHHHHHHHHHHHHTCGGGTTSEEEEEEECHH
T ss_pred eeeeeeecccceeeecccccccccccceeEEEEEcCCcceeeeecccchhhhHHHHHHHHHhhChhhcCceEEEEeccch
Confidence 345666677772111 01112246889999998875432110 00012346799999999
Q ss_pred CCCch----------------hHhHHH----HHHHHHhcCC---C--CCEEEEecccCCCHHHHHHHHhh
Q 030407 131 LASAI----------------GADLAV----MERDALRMRD---G--GPFIFAQVGWVIGIIFTLSITHY 175 (178)
Q Consensus 131 l~~~~----------------~~~~~~----~~~~l~~~np---~--a~i~~~SA~~g~gi~el~~~l~~ 175 (178)
+.+.. +...+. +.+..+..++ . ...+.|||+++++|+++|+.+..
T Consensus 123 l~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~iy~~~TsA~d~~ni~~vf~~v~d 192 (200)
T d1zcba2 123 LLEEKVQVVSIKDYFLEFEGDPHCLRDVQKFLVECFRGKRRDQQQRPLYHHFTTAINTENIRLVFRDVKD 192 (200)
T ss_dssp HHHHHTTTCCGGGTCTTCCSCTTCHHHHHHHHHHHHHTTCSSCC--CCEEEECCTTCHHHHHHHHHHHHH
T ss_pred hhhhhccccHHHHhCccccCCcchHHHHHHHHHHHHHHhccCCCCCceEEEEeeeeCcHHHHHHHHHHHH
Confidence 84210 011222 2233332221 1 23457999999999999988754
No 92
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=94.54 E-value=0.011 Score=43.53 Aligned_cols=146 Identities=18% Similarity=0.116 Sum_probs=74.7
Q ss_pred HHHHHHhhcC-CcEEEEEecCC-C-chhHHHH--HHcCCCCccceeecccCCCcccccccccccCHhHHHhhHhhCCCCE
Q 030407 2 LALCKFLRDK-YSLAAVTNDIF-T-KEDGEFL--MRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKADL 76 (178)
Q Consensus 2 ~~~~~~~~~~-~~vaVI~nd~g-~-~iD~~li--~~~~~~~~~~~~~l~~GcCc~l~i~~dl~~~l~~l~~l~~~~~~d~ 76 (178)
.+|..++.++ +|+++|.-|.. . .++.... +..++ ++....+. +|+.........+.+..++|+
T Consensus 28 aKLA~~~~~~g~kV~lit~Dt~R~gA~eQL~~~a~~l~v----~~~~~~~~--------~~~~~~~~~~~~~~~~~~~d~ 95 (207)
T d1ls1a2 28 AKLALYYKGKGRRPLLVAADTQRPAAREQLRLLGEKVGV----PVLEVMDG--------ESPESIRRRVEEKARLEARDL 95 (207)
T ss_dssp HHHHHHHHHTTCCEEEEECCSSCHHHHHHHHHHHHHHTC----CEEECCTT--------CCHHHHHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHCCCcEEEEecccccchHHHHHHHHHHhcCC----cccccccc--------chhhHHHHHHHHHHhhccCcc
Confidence 3566667654 99999999977 4 5554322 22243 33333221 122111112223444568999
Q ss_pred EEEeCCcchhh---------hcccccccceEEEEEeCCCCCCCCcCCCC--CCCceeEEEEecCCCCCchhHhHHHHHHH
Q 030407 77 LLCESGGDNLA---------ANFSRELADYIIYIIDVSGGDKIPRKGGP--GITQADLLVINKTDLASAIGADLAVMERD 145 (178)
Q Consensus 77 iiiEttG~~~~---------~~~~~~~ad~~I~VvD~~~~~~~~~~~~~--qi~~adiiviNK~Dl~~~~~~~~~~~~~~ 145 (178)
|||.|.|.+.. ........+-+++|+|++.+.+....... ..-..+-++++|.|-... ...+...
T Consensus 96 vlIDTaGr~~~d~~~~~el~~~~~~~~~~~~llv~~a~~~~~~~~~~~~f~~~~~~~~~I~TKlDe~~~----~G~~l~~ 171 (207)
T d1ls1a2 96 ILVDTAGRLQIDEPLMGELARLKEVLGPDEVLLVLDAMTGQEALSVARAFDEKVGVTGLVLTKLDGDAR----GGAALSA 171 (207)
T ss_dssp EEEECCCCSSCCHHHHHHHHHHHHHHCCSEEEEEEEGGGTHHHHHHHHHHHHHTCCCEEEEECGGGCSS----CHHHHHH
T ss_pred eeecccccchhhhhhHHHHHHHHhhcCCceEEEEeccccchhHHHHHHHHHhhCCCCeeEEeecCcccc----chHHHHH
Confidence 99999994211 00111123778999998776432211000 001236799999997544 3344444
Q ss_pred HHhcCCCCCEEEEecccCCCHH
Q 030407 146 ALRMRDGGPFIFAQVGWVIGII 167 (178)
Q Consensus 146 l~~~np~a~i~~~SA~~g~gi~ 167 (178)
.... ..|+.+++ +|+..+
T Consensus 172 ~~~~--~~Pi~~i~--~Gq~pe 189 (207)
T d1ls1a2 172 RHVT--GKPIYFAG--VSEKPE 189 (207)
T ss_dssp HHHH--CCCEEEEC--------
T ss_pred HHHH--CCCEEEEe--CCCChh
Confidence 4444 35777765 355444
No 93
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=92.14 E-value=0.1 Score=41.56 Aligned_cols=104 Identities=10% Similarity=-0.065 Sum_probs=57.4
Q ss_pred CCCCEEEEeCCcchhh----hc----ccccccceEEEEEeCCCCCCCCcC---CCCCCCceeEEEEecCCCCCch-----
Q 030407 72 FKADLLLCESGGDNLA----AN----FSRELADYIIYIIDVSGGDKIPRK---GGPGITQADLLVINKTDLASAI----- 135 (178)
Q Consensus 72 ~~~d~iiiEttG~~~~----~~----~~~~~ad~~I~VvD~~~~~~~~~~---~~~qi~~adiiviNK~Dl~~~~----- 135 (178)
..+.++|+.|.|..-. .. ......|.++++.|..- ...... .......+-++|+||+|...+.
T Consensus 105 ~~~~~~l~DtPG~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~-~~~d~~l~~~l~~~~k~~~~V~nK~D~~~~~~~~~~ 183 (400)
T d1tq4a_ 105 NIPNVVFWDLPGIGSTNFPPDTYLEKMKFYEYDFFIIISATRF-KKNDIDIAKAISMMKKEFYFVRTKVDSDITNEADGE 183 (400)
T ss_dssp SCTTEEEEECCCGGGSSCCHHHHHHHTTGGGCSEEEEEESSCC-CHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTTC
T ss_pred CCCeEEEEeCCCcccccccHHHHHHHhhhhcceEEEEecCCCC-CHHHHHHHHHHHHcCCCEEEEEeCcccccchhhhcc
Confidence 3577999999995321 00 11122477777766421 111101 1112456789999999964110
Q ss_pred ------hHhHHHHH----HHHHhc-CCCCCEEEEeccc--CCCHHHHHHHHhhh
Q 030407 136 ------GADLAVME----RDALRM-RDGGPFIFAQVGW--VIGIIFTLSITHYI 176 (178)
Q Consensus 136 ------~~~~~~~~----~~l~~~-np~a~i~~~SA~~--g~gi~el~~~l~~~ 176 (178)
...++.++ +.++.. .+..++|.+|..+ ..|+++|.+.+.+.
T Consensus 184 ~~~~~~e~~l~~ir~~~~~~l~~~~~~~~~vflvS~~~~~~~d~~~L~~~l~~~ 237 (400)
T d1tq4a_ 184 PQTFDKEKVLQDIRLNCVNTFRENGIAEPPIFLLSNKNVCHYDFPVLMDKLISD 237 (400)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHHHTTCSSCCEEECCTTCTTSTTHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHcCCCCCCEEEecCCcccccCHHHHHHHHHHH
Confidence 01222332 333332 2456899999765 45899999987654
No 94
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]}
Probab=90.30 E-value=0.06 Score=39.10 Aligned_cols=20 Identities=10% Similarity=-0.228 Sum_probs=16.8
Q ss_pred EEEEecccCCCHHHHHHHHh
Q 030407 155 FIFAQVGWVIGIIFTLSITH 174 (178)
Q Consensus 155 i~~~SA~~g~gi~el~~~l~ 174 (178)
.+.|||+++++|+.+|+.+.
T Consensus 191 ~h~T~A~Dt~ni~~vf~~v~ 210 (221)
T d1azta2 191 PHFTCAVDTENIRRVFNDCR 210 (221)
T ss_dssp EEECCTTCHHHHHHHHHTTH
T ss_pred eeecceeccHHHHHHHHHHH
Confidence 45799999999999997654
No 95
>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=88.95 E-value=0.042 Score=43.20 Aligned_cols=57 Identities=23% Similarity=0.300 Sum_probs=35.1
Q ss_pred EEEEeCCcc-hhh-hcc-cccccceEEEEEeCCCCCCCCcC----CCCCCCceeEEEEecCCCC
Q 030407 76 LLLCESGGD-NLA-ANF-SRELADYIIYIIDVSGGDKIPRK----GGPGITQADLLVINKTDLA 132 (178)
Q Consensus 76 ~iiiEttG~-~~~-~~~-~~~~ad~~I~VvD~~~~~~~~~~----~~~qi~~adiiviNK~Dl~ 132 (178)
+=||.|.|- ... ... ....+|++++|||+.+|...+.. .......+-++++||+|..
T Consensus 98 inliDtPGh~dF~~ev~~al~~~D~allVVda~eGv~~qT~~~~~~a~~~~~p~i~viNKiDr~ 161 (341)
T d1n0ua2 98 INLIDSPGHVDFSSEVTAALRVTDGALVVVDTIEGVCVQTETVLRQALGERIKPVVVINKVDRA 161 (341)
T ss_dssp EEEECCCCCCSSCHHHHHHHHTCSEEEEEEETTTBSCHHHHHHHHHHHHTTCEEEEEEECHHHH
T ss_pred EEEEcCCCcHHHHHHHHHHHhhcCceEEEEecccCcchhHHHHHHHHHHcCCCeEEEEECcccc
Confidence 446999992 011 110 11246999999999988654321 1112344679999999974
No 96
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=74.62 E-value=1.1 Score=30.83 Aligned_cols=62 Identities=16% Similarity=0.182 Sum_probs=34.4
Q ss_pred CCCEEEEeCCcchh-----hhccc--ccccceEEEEEeCCCCCCCCcC-------------CCCCCCceeEEEEecCCCC
Q 030407 73 KADLLLCESGGDNL-----AANFS--RELADYIIYIIDVSGGDKIPRK-------------GGPGITQADLLVINKTDLA 132 (178)
Q Consensus 73 ~~d~iiiEttG~~~-----~~~~~--~~~ad~~I~VvD~~~~~~~~~~-------------~~~qi~~adiiviNK~Dl~ 132 (178)
+..+.++.+.|..- ...+. ....+.++.++|+......... ....-..+-++|+||+|+.
T Consensus 45 ~~~~~l~D~~g~~~~~~~~~~~~~~~~~~~~~~i~~vd~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~piiiv~NK~D~~ 124 (209)
T d1nrjb_ 45 GSGVTLVDFPGHVKLRYKLSDYLKTRAKFVKGLIFMVDSTVDPKKLTTTAEFLVDILSITESSCENGIDILIACNKSELF 124 (209)
T ss_dssp GSSCEEEECCCCGGGTHHHHHHHHHHGGGEEEEEEEEETTSCTTCCHHHHHHHHHHHHHHHHHSTTCCCEEEEEECTTST
T ss_pred CeEEEEEecccccchhhHHHHHHHHHhhhccccceEEEEecccccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeccc
Confidence 45567788888321 01111 1124788999998764322110 0011234568999999997
Q ss_pred Cc
Q 030407 133 SA 134 (178)
Q Consensus 133 ~~ 134 (178)
+.
T Consensus 125 ~~ 126 (209)
T d1nrjb_ 125 TA 126 (209)
T ss_dssp TC
T ss_pred cc
Confidence 64
No 97
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=68.28 E-value=4.8 Score=29.14 Aligned_cols=63 Identities=11% Similarity=0.133 Sum_probs=35.5
Q ss_pred CCCCEEEEeCCcchh-----------hhc-ccccccceEEEEEeCCCCCCCC-c---------CCCCCCCceeEEEEecC
Q 030407 72 FKADLLLCESGGDNL-----------AAN-FSRELADYIIYIIDVSGGDKIP-R---------KGGPGITQADLLVINKT 129 (178)
Q Consensus 72 ~~~d~iiiEttG~~~-----------~~~-~~~~~ad~~I~VvD~~~~~~~~-~---------~~~~qi~~adiiviNK~ 129 (178)
.+..+.||.|.|..- ... ......+.+++|++.....-.. . .+.+.+-..-++|+||+
T Consensus 78 ~g~~i~viDTPGl~~~~~~~~~~~~~i~~~~~~~~~~~il~v~~~~~~r~~~~~~~~l~~l~~~fg~~~~~~~ivv~t~~ 157 (257)
T d1h65a_ 78 AGFTLNIIDTPGLIEGGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWNKAIVALTHA 157 (257)
T ss_dssp TTEEEEEEECCCSEETTEECHHHHHHHHHHTTTCEECEEEEEEESSCCCCCHHHHHHHHHHHHHHCGGGGGGEEEEEECC
T ss_pred ccEEEEEEeeecccCCcchHHHHHHHHHHHHhcCCCCeEEEEEECCCCCCCHHHHHHHHHHHHHcchhhhhCEEEEEECc
Confidence 356899999999510 001 1112347788888775432110 0 01122223459999999
Q ss_pred CCCCc
Q 030407 130 DLASA 134 (178)
Q Consensus 130 Dl~~~ 134 (178)
|..++
T Consensus 158 D~~~~ 162 (257)
T d1h65a_ 158 QFSPP 162 (257)
T ss_dssp SCCCG
T ss_pred ccCCc
Confidence 99865
No 98
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=58.14 E-value=4.6 Score=29.52 Aligned_cols=62 Identities=19% Similarity=0.110 Sum_probs=32.9
Q ss_pred CCCEEEEeCCcchhh-----------------hcccccccceEEEEEeCCCCCCCCc--CCC---CCCCceeEEEEecCC
Q 030407 73 KADLLLCESGGDNLA-----------------ANFSRELADYIIYIIDVSGGDKIPR--KGG---PGITQADLLVINKTD 130 (178)
Q Consensus 73 ~~d~iiiEttG~~~~-----------------~~~~~~~ad~~I~VvD~~~~~~~~~--~~~---~qi~~adiiviNK~D 130 (178)
.++..||.+.|..-. ..|.....+.+++|.++........ .+. ......-++|+||+|
T Consensus 124 ~~~l~liD~PG~~~~~~~~~~~~~~~~i~~~~~~y~~~~~~~il~v~~a~~~~~~~~~~~~~~~~~~~~~r~i~Vltk~D 203 (299)
T d2akab1 124 VLNLTLVDLPGMTKVPVGDQPPDIEFQIRDMLMQFVTKENCLILAVSPANSDLANSDALKIAKEVDPQGQRTIGVITKLD 203 (299)
T ss_dssp CCSEEEEECCCBCSSCCSSSCTTHHHHHHHHHHHHHTSTTEEEEEEEESSSCGGGCHHHHHHHHHCTTCSSEEEEEECGG
T ss_pred CCCeeEEccCCccccccCCcchhHHHHHHHHHHHHhcCccceeeeecccccchhhhHHHHHHHHhCcCCCceeeEEeccc
Confidence 357889999995211 0011111245667777754332211 000 111224599999999
Q ss_pred CCCc
Q 030407 131 LASA 134 (178)
Q Consensus 131 l~~~ 134 (178)
+.++
T Consensus 204 ~~~~ 207 (299)
T d2akab1 204 LMDE 207 (299)
T ss_dssp GSCT
T ss_pred cccc
Confidence 9865
No 99
>d1x74a1 c.123.1.1 (A:2-360) 2-methylacyl-CoA racemase Mcr {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=51.82 E-value=1.6 Score=33.21 Aligned_cols=86 Identities=15% Similarity=0.157 Sum_probs=43.8
Q ss_pred hHhhCCCCEEEEeCCcchhhhcccccccceEEEEEeCCCCCCCCcCCCCCCCceeEEEEecCCCCCchhHhHHHHHHHHH
Q 030407 68 LSNLFKADLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLASAIGADLAVMERDAL 147 (178)
Q Consensus 68 l~~~~~~d~iiiEttG~~~~~~~~~~~ad~~I~VvD~~~~~~~~~~~~~qi~~adiiviNK~Dl~~~~~~~~~~~~~~l~ 147 (178)
++...+-|+|=||..|..-...+......-.-+.+|....... +.+.+.++.||+++-|-..-.- +.+.-=.+.++
T Consensus 24 ~lad~GA~VikvE~p~~~~~~~~~~~nr~K~si~lDl~~~~g~-~~~~~Lv~~aDv~i~n~~pg~~---~~lgl~~~~l~ 99 (359)
T d1x74a1 24 ILGDLGADVVRIDRPSSVDGISRDAMLRNRRIVTADLKSDQGL-ELALKLIAKADVLIEGYRPGVT---ERLGLGPEECA 99 (359)
T ss_dssp HHHHTTCEEEEEECC-----CCCCGGGCSCEEEECCTTSHHHH-HHHHHHHTTCSEEEECSCTTHH---HHHTCSHHHHH
T ss_pred HHHHhCCEEEEECCCCCCCchhhhhhhCCCeEEEEeCcCHHHH-HHHHHHHhhCCEEEecCCCCch---hhcCCCHHHHH
Confidence 4446789999999887211111211112334445565332111 1122347889999999654211 12222236678
Q ss_pred hcCCCCCEEEEe
Q 030407 148 RMRDGGPFIFAQ 159 (178)
Q Consensus 148 ~~np~a~i~~~S 159 (178)
++||. ++.+|
T Consensus 100 ~~nP~--lI~~s 109 (359)
T d1x74a1 100 KVNDR--LIYAR 109 (359)
T ss_dssp HHCTT--CEEEE
T ss_pred hhcCC--ceEEE
Confidence 88994 55555
No 100
>d1ni3a1 c.37.1.8 (A:11-306) YchF GTP-binding protein N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=48.41 E-value=5.5 Score=29.39 Aligned_cols=42 Identities=12% Similarity=0.107 Sum_probs=30.3
Q ss_pred ceeEEEEecCCC--CCchhHhHHHHHHHHHhcCCCCCEEEEecc
Q 030407 120 QADLLVINKTDL--ASAIGADLAVMERDALRMRDGGPFIFAQVG 161 (178)
Q Consensus 120 ~adiiviNK~Dl--~~~~~~~~~~~~~~l~~~np~a~i~~~SA~ 161 (178)
.+-++|+||.|. ........+.+.+++++..+..+++.+||+
T Consensus 215 KP~i~v~Nv~E~~~~~~~n~~~~~v~~~~~~~~~~~~vi~isa~ 258 (296)
T d1ni3a1 215 KPVIYLVNMSERDFLRQKNKYLPKIKKWIDENSPGDTLIPMSVA 258 (296)
T ss_dssp SCEEEEEECCHHHHTTTCCSSHHHHHHHHHTTSTTCCEEEECHH
T ss_pred CCeeeeccccchhhhhhhhHHHHHHHHHHHhhCCCCeEEEEEHH
Confidence 478999999863 222113456777788877788899999995
No 101
>d1jwyb_ c.37.1.8 (B:) Dynamin G domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=40.19 E-value=21 Score=25.85 Aligned_cols=14 Identities=36% Similarity=0.375 Sum_probs=11.5
Q ss_pred eeEEEEecCCCCCc
Q 030407 121 ADLLVINKTDLASA 134 (178)
Q Consensus 121 adiiviNK~Dl~~~ 134 (178)
--++|+||+|..+.
T Consensus 200 r~i~Vitk~D~~~~ 213 (306)
T d1jwyb_ 200 RTIGVITKLDLMDK 213 (306)
T ss_dssp SEEEEEECTTSSCS
T ss_pred eEEEEEeccccccc
Confidence 35999999999754
No 102
>d2b4aa1 c.23.1.1 (A:2-119) Hypothetical protein BH3024 {Bacillus halodurans [TaxId: 86665]}
Probab=27.69 E-value=21 Score=22.16 Aligned_cols=19 Identities=26% Similarity=0.343 Sum_probs=12.9
Q ss_pred hHHHhhHhhCCCCEEEEeC
Q 030407 63 GPLEELSNLFKADLLLCES 81 (178)
Q Consensus 63 ~~l~~l~~~~~~d~iiiEt 81 (178)
+++..+.+..+||.|+++-
T Consensus 37 ~al~~l~~~~~~dliilD~ 55 (118)
T d2b4aa1 37 AFFQHRSQLSTCDLLIVSD 55 (118)
T ss_dssp HHHHTGGGGGSCSEEEEET
T ss_pred HHHHHHHhcCCCCEEEEeC
Confidence 4555565455799999954
No 103
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=26.56 E-value=80 Score=22.71 Aligned_cols=76 Identities=16% Similarity=0.156 Sum_probs=48.3
Q ss_pred ceEEEEEeCCCCCCCCcCCCCCCC--ceeEEEEecCCCCCchhHhHHHHHHHHHhcCCCCCEEEEecccCCC--HHHHHH
Q 030407 96 DYIIYIIDVSGGDKIPRKGGPGIT--QADLLVINKTDLASAIGADLAVMERDALRMRDGGPFIFAQVGWVIG--IIFTLS 171 (178)
Q Consensus 96 d~~I~VvD~~~~~~~~~~~~~qi~--~adiiviNK~Dl~~~~~~~~~~~~~~l~~~np~a~i~~~SA~~g~g--i~el~~ 171 (178)
+..+.++|.....+.......-+. .+-++|++=.|-+.. +.+++.+..++.+ -..++.++-...+| ..++++
T Consensus 70 ~~~~n~iDtPG~~dF~~e~~~~l~~~D~avlVvda~~Gv~~---~T~~~w~~a~~~~-lP~i~fINKmDr~~ad~~~~l~ 145 (276)
T d2bv3a2 70 DHRINIIDAPGHVDFTIEVERSMRVLDGAIVVFDSSQGVEP---QSETVWRQAEKYK-VPRIAFANKMDKTGADLWLVIR 145 (276)
T ss_dssp TEEEEEECCCSSSSCSTTHHHHHHHCCEEEEEEETTTSSCH---HHHHHHHHHHTTT-CCEEEEEECTTSTTCCHHHHHH
T ss_pred CeEEEEecCCchhhhHHHHHHHHHhhhheEEeccccCCcch---hHHHHHHHHHHcC-CCEEEEEecccccccccchhHH
Confidence 778999998765554322111123 334888888887766 5566666666543 34788888877555 677777
Q ss_pred HHhh
Q 030407 172 ITHY 175 (178)
Q Consensus 172 ~l~~ 175 (178)
.+.+
T Consensus 146 ei~~ 149 (276)
T d2bv3a2 146 TMQE 149 (276)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
No 104
>d2a9pa1 c.23.1.1 (A:2-118) DNA-binding response regulator MicA, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}
Probab=25.34 E-value=17 Score=22.48 Aligned_cols=17 Identities=18% Similarity=0.446 Sum_probs=10.4
Q ss_pred hHHHhhHhhCCCCEEEEe
Q 030407 63 GPLEELSNLFKADLLLCE 80 (178)
Q Consensus 63 ~~l~~l~~~~~~d~iiiE 80 (178)
+++..+ +.++||.|++.
T Consensus 35 eal~~~-~~~~~dlillD 51 (117)
T d2a9pa1 35 EALEQF-EAEQPDIIILD 51 (117)
T ss_dssp HHHHHH-HHHCCSEEEEC
T ss_pred HHHHHH-HhcCCCEEEec
Confidence 344333 35678888875
No 105
>d3bofa2 c.1.26.1 (A:1-300) Cobalamin-dependent methionine synthase MetH, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=24.29 E-value=12 Score=27.37 Aligned_cols=23 Identities=17% Similarity=0.287 Sum_probs=12.7
Q ss_pred CCCcccccccccccCHhHHHhhHhhCCC
Q 030407 47 GGCPHAAIREDISINLGPLEELSNLFKA 74 (178)
Q Consensus 47 GcCc~l~i~~dl~~~l~~l~~l~~~~~~ 74 (178)
|+||..+ ...+++|.++++...|
T Consensus 270 GGCCgt~-----P~hI~~l~~~l~~~~p 292 (300)
T d3bofa2 270 GGCCGTT-----PEHVKLFRKVLGNRKP 292 (300)
T ss_dssp CCCTTCC-----HHHHHHHHHHHCSCCC
T ss_pred EEcCCCC-----HHHHHHHHHHHhCCCC
Confidence 5566432 4556777666654433
No 106
>d1g1pa_ g.3.6.1 (A:) Conotoxin {Conus ermineus, E VIa [TaxId: 55423]}
Probab=22.94 E-value=13 Score=17.51 Aligned_cols=9 Identities=22% Similarity=0.486 Sum_probs=6.2
Q ss_pred ecccCCCcc
Q 030407 43 AVETGGCPH 51 (178)
Q Consensus 43 ~l~~GcCc~ 51 (178)
-|.||-||+
T Consensus 14 ilknglccs 22 (32)
T d1g1pa_ 14 ILKNGLCCS 22 (32)
T ss_dssp SSSCCCBTT
T ss_pred hhcCCcccc
Confidence 366777885
No 107
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=22.91 E-value=33 Score=23.08 Aligned_cols=62 Identities=13% Similarity=-0.006 Sum_probs=33.2
Q ss_pred CCCCEEEEeCCcchhhhcc--cccccceEEEEEeCCCCCCCCc-C---CCCCCCcee-EEEEecCCCCCc
Q 030407 72 FKADLLLCESGGDNLAANF--SRELADYIIYIIDVSGGDKIPR-K---GGPGITQAD-LLVINKTDLASA 134 (178)
Q Consensus 72 ~~~d~iiiEttG~~~~~~~--~~~~ad~~I~VvD~~~~~~~~~-~---~~~qi~~ad-iiviNK~Dl~~~ 134 (178)
..+|+|++++.+. +.... ....+|.+++++.+....-... + ..++....- -+|+||.+..+.
T Consensus 110 ~~~d~IiiD~~~~-~~~~~~~~l~~aD~viiv~~~~~~s~~~~~~~~~~~~~~~~~~~giv~N~~~~~~~ 178 (237)
T d1g3qa_ 110 DKFDFILIDCPAG-LQLDAMSAMLSGEEALLVTNPEISCLTDTMKVGIVLKKAGLAILGFVLNRYGRSDR 178 (237)
T ss_dssp GGCSEEEEECCSS-SSHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHHHHHTTCEEEEEEEEEETSCTT
T ss_pred hcCCEEEEccccc-ccccchhhhhhhhcccccccccceecchhhHHHHHHhhhhhhhhhhhhcccccccc
Confidence 4799999999883 22111 1123688999887642110000 0 001112222 278999987654
No 108
>d1xhja_ d.52.8.1 (A:) Nitrogen fixation protein NifU homolog SE0630 {Staphylococcus epidermidis [TaxId: 1282]}
Probab=21.12 E-value=12 Score=22.79 Aligned_cols=31 Identities=16% Similarity=0.222 Sum_probs=16.7
Q ss_pred ceeecccCC--CcccccccccccCH-hHHHhhHhhCCCCE
Q 030407 40 RIRAVETGG--CPHAAIREDISINL-GPLEELSNLFKADL 76 (178)
Q Consensus 40 ~~~~l~~Gc--Cc~l~i~~dl~~~l-~~l~~l~~~~~~d~ 76 (178)
-.+.|.++| |.+- ..++ ..++..++.+=|++
T Consensus 40 V~v~l~GaC~gC~~s------~~Tlk~~Ie~~L~~~vpev 73 (88)
T d1xhja_ 40 VKLQLHGACGTCPSS------TITLKAGIERALHEEVPGV 73 (88)
T ss_dssp EEEEEESSCCSSCHH------HHHHHHHHHHHHHHHSTTC
T ss_pred EEEEecCCCCCCccH------HHHHHHHHHHHHHHHCCCC
Confidence 356788888 5532 3344 55555554443443
No 109
>d1wxqa1 c.37.1.8 (A:1-319) GTP-binding protein PH0525 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=20.22 E-value=41 Score=24.25 Aligned_cols=40 Identities=20% Similarity=0.198 Sum_probs=26.5
Q ss_pred ceeEEEEecCCCCCchhHhHHHHHHHHHhcCCCCCEEEEecccC
Q 030407 120 QADLLVINKTDLASAIGADLAVMERDALRMRDGGPFIFAQVGWV 163 (178)
Q Consensus 120 ~adiiviNK~Dl~~~~~~~~~~~~~~l~~~np~a~i~~~SA~~g 163 (178)
.+.+++.||.|.... +..+++.+.... ....++.+||+..
T Consensus 215 kP~~~v~Nk~d~~~~--e~~~~~~~~~~~--~~~~vi~~sa~~E 254 (319)
T d1wxqa1 215 KPMVIAANKADAASD--EQIKRLVREEEK--RGYIVIPTSAAAE 254 (319)
T ss_dssp SCEEEEEECGGGSCH--HHHHHHHHHHHH--TTCEEEEECHHHH
T ss_pred Cchhhhcccccchhh--HHHHHHHHHHhh--cCCEEEEecHHHH
Confidence 347899999997665 555555544443 3457788887643
Done!