BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>030409
MGIGLWFNKRIVEPLLQILRRGAEPNQLAFSTALGITLGLFPICGAAVFLCGMAIAALRS
RCHAPSVMLANFIATPIELSLVVPFLRFGEALTGGPHFPLNSDALKRVLTGKASQEVLLS
IAHALLGWLVATPFILTALYLVLLPVFKILVRKFSSAALSSKKELHSYSEIKLKVRDA

High Scoring Gene Products

Symbol, full name Information P value
AT4G10140 protein from Arabidopsis thaliana 3.9e-60
AT1G33490 protein from Arabidopsis thaliana 6.4e-60

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  030409
        (178 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2124690 - symbol:AT4G10140 "AT4G10140" species...   616  3.9e-60   1
TAIR|locus:2007018 - symbol:AT1G33490 "AT1G33490" species...   614  6.4e-60   1


>TAIR|locus:2124690 [details] [associations]
            symbol:AT4G10140 "AT4G10140" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0005794 "Golgi apparatus"
            evidence=IDA] [GO:0015824 "proline transport" evidence=RCA]
            GO:GO:0005794 EMBL:CP002687 EMBL:AL049487 EMBL:AL161516
            HOGENOM:HOG000006234 ProtClustDB:CLSN2688242 InterPro:IPR018639
            Pfam:PF09835 EMBL:AY086828 IPI:IPI00523031 PIR:T04064
            RefSeq:NP_567353.1 UniGene:At.33651 PRIDE:Q9SN29
            EnsemblPlants:AT4G10140.1 GeneID:826605 KEGG:ath:AT4G10140
            TAIR:At4g10140 InParanoid:Q9SN29 OMA:AWFNKKI PhylomeDB:Q9SN29
            Genevestigator:Q9SN29 Uniprot:Q9SN29
        Length = 183

 Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
 Identities = 120/173 (69%), Positives = 135/173 (78%)

Query:     6 WFNKRIVEPLLQILRRGAEPNQLAFSTALGITLGLFPICGAAVFLCGMAIAALRSRCHAP 65
             WFNK+I +PLLQILRRG EP QLAFS ALGITLG+FPICG  V LCG+A A L S CHAP
Sbjct:    11 WFNKKITDPLLQILRRGTEPKQLAFSAALGITLGIFPICGVPVLLCGVAFALLGSSCHAP 70

Query:    66 SVMLANFIATPIELSLVVPFLRFGEALTGGPHFPLNSDALKRVLTGKASQEVLLSIAHAL 125
             +VMLAN IATP+EL+LVVPFLR GE +TGGPHFPL SDALK+V TG+ASQEV LSI +AL
Sbjct:    71 TVMLANIIATPVELALVVPFLRLGEKVTGGPHFPLTSDALKKVFTGQASQEVFLSIGNAL 130

Query:   126 LGWLVATPFILTALYLVLLPVFKILVRKFSSAALSSKKELHSYSEIKLKVRDA 178
             LGWLVATPF    LY+VLLP F ILVRKF   A + K      +E+  K RDA
Sbjct:   131 LGWLVATPFFFITLYVVLLPCFTILVRKFGGVASTQKLPTSMETELNPKPRDA 183


>TAIR|locus:2007018 [details] [associations]
            symbol:AT1G33490 "AT1G33490" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
            GO:GO:0005783 EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC051630
            EMBL:AK117644 IPI:IPI00543498 PIR:G86458 RefSeq:NP_564425.1
            UniGene:At.39931 PaxDb:Q9C803 PRIDE:Q9C803 ProMEX:Q9C803
            EnsemblPlants:AT1G33490.1 GeneID:840243 KEGG:ath:AT1G33490
            TAIR:At1g33490 eggNOG:NOG29506 HOGENOM:HOG000006234
            InParanoid:Q9C803 OMA:QILRRGA PhylomeDB:Q9C803
            ProtClustDB:CLSN2688242 Genevestigator:Q9C803 InterPro:IPR018639
            Pfam:PF09835 Uniprot:Q9C803
        Length = 175

 Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
 Identities = 115/158 (72%), Positives = 137/158 (86%)

Query:     5 LWFNKRIVEPLLQILRRGAEPNQLAFSTALGITLGLFPICGAAVFLCGMAIAALRSRCHA 64
             +WF+K+I EPL+QILRRGAEP QLAFS ALGIT+G+FPICG  V LCG+AIA+L S CHA
Sbjct:    10 VWFDKKISEPLIQILRRGAEPKQLAFSAALGITMGVFPICGVTVLLCGVAIASLGSLCHA 69

Query:    65 PSVMLANFIATPIELSLVVPFLRFGEALTGGPHFPLNSDALKRVLTGKASQEVLLSIAHA 124
             P+VMLANFIATPIELSLVVPFLR GE +TGGPHFPL SDALK+V TG+AS++V LSI +A
Sbjct:    70 PTVMLANFIATPIELSLVVPFLRLGEKITGGPHFPLTSDALKKVFTGQASRDVFLSIGNA 129

Query:   125 LLGWLVATPFILTALYLVLLPVFKILVRKFSSAALSSK 162
             LLGWL+A PF++ ALY++ LP FKILVRKFSS   ++K
Sbjct:   130 LLGWLIAAPFVIVALYIMFLPCFKILVRKFSSVDSTAK 167


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.327   0.141   0.418    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      178       178   0.00086  109 3  11 22  0.47    31
                                                     31  0.39    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  568 (60 KB)
  Total size of DFA:  131 KB (2083 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.44u 0.10s 16.54t   Elapsed:  00:00:02
  Total cpu time:  16.44u 0.10s 16.54t   Elapsed:  00:00:02
  Start:  Sat May 11 00:05:24 2013   End:  Sat May 11 00:05:26 2013

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