Query 030415
Match_columns 177
No_of_seqs 144 out of 741
Neff 4.5
Searched_HMMs 29240
Date Mon Mar 25 21:46:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030415.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030415hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2jon_A Beta-1,3-glucanase; oli 100.0 2E-37 6.8E-42 233.7 10.6 91 37-127 9-99 (101)
2 2w61_A GAS2P, glycolipid-ancho 99.9 6.6E-26 2.3E-30 210.7 3.7 89 38-128 395-495 (555)
3 2v33_A E1 envelope glycoprotei 19.1 24 0.00082 25.7 0.0 27 105-131 20-46 (91)
4 1efe_A Mini-proinsulin, M2PI; 13.6 1.7E+02 0.0058 19.2 3.2 39 50-88 8-58 (60)
5 2gsv_A Hypothetical protein YV 13.0 72 0.0025 22.4 1.2 9 88-96 28-36 (80)
6 2wfu_B Probable insulin-like p 10.3 1.7E+02 0.0057 16.5 1.9 15 50-64 7-21 (26)
7 1bqt_A Somatomedin C, insulin- 9.0 1.8E+02 0.0062 19.6 2.1 13 51-63 8-20 (70)
8 3j0f_E E1 envelope glycoprotei 8.8 1.7E+02 0.0057 26.6 2.3 25 105-129 311-335 (439)
9 1b9g_A Protein (growth factor 8.7 1.7E+02 0.0059 19.2 1.9 36 51-88 8-47 (57)
10 1i9w_A Fusion protein E1; enve 8.2 1.8E+02 0.0063 25.9 2.3 27 105-131 311-337 (390)
No 1
>2jon_A Beta-1,3-glucanase; olive pollen, allergen; NMR {Olea europaea}
Probab=100.00 E-value=2e-37 Score=233.74 Aligned_cols=91 Identities=47% Similarity=1.032 Sum_probs=88.2
Q ss_pred CCccceEeCCCCCHHHHHHHHHhhcCCCCCCCccCCCCCcCCCCChhhhHhHHHhHHHHhcCCCCCCCCCCCceEEEecC
Q 030415 37 GNSTWCVARSDASNQALQTALDYACGTGADCTPIQPNGLCYLPNTIQAHASYAFNSYFQRKGMAPGSCDFSGTATIAKTD 116 (177)
Q Consensus 37 ~~slwCVak~~~~~~~lq~~ldyACg~gvDCs~I~~gGscyspct~~~~aSyAfN~YYq~~~~~~~aCdF~G~A~itt~d 116 (177)
++++|||+|+++++++||++||||||+|+||++|++||+||+||++++|+|||||+|||++++..++|||+|+|+++++|
T Consensus 9 ~~~~wCVak~~~~~~~l~~~ldyACg~gaDC~~I~~gg~Cy~p~t~~~haSyAfN~YYq~~~~~~~aCdF~G~A~it~~d 88 (101)
T 2jon_A 9 AAGSWCVPKPGVSDDQLTGNINYACSQGIDCGPIQPGGACFEPNTVKAHAAYVMNLYYQHAGRNSWNCDFSQTATLTNTN 88 (101)
T ss_dssp CCSCEEEECTTSCHHHHHHHHHHHTTTSSSSSTTCCCSSSCSSCCTTHHHHHHHHHHHHHHTSSGGGCCSCSSEEEESSC
T ss_pred CCCcEEEECCCCCHHHHHHHHHHHcCCCCCccccCcCCcccCCCCHHHHHHHHHHHHHHHcCCCCCccCCCCeEEEeecC
Confidence 47889999999999999999999999888999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceeeccc
Q 030415 117 PSYGSCMYPSS 127 (177)
Q Consensus 117 PS~~sC~~~~~ 127 (177)
||.++|+|+++
T Consensus 89 PS~g~C~f~~~ 99 (101)
T 2jon_A 89 PSYGACNFPSG 99 (101)
T ss_dssp CCCSSSCCCCS
T ss_pred CCCCceecCCC
Confidence 99999999874
No 2
>2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A*
Probab=99.91 E-value=6.6e-26 Score=210.65 Aligned_cols=89 Identities=16% Similarity=0.286 Sum_probs=84.2
Q ss_pred CccceEeCCC-CCHHHHHHHHHhhcCCCCCCCccCCCCC-----cCCCCChhhhHhHHHhHHHHhcCCCCCCCCCCCc--
Q 030415 38 NSTWCVARSD-ASNQALQTALDYACGTGADCTPIQPNGL-----CYLPNTIQAHASYAFNSYFQRKGMAPGSCDFSGT-- 109 (177)
Q Consensus 38 ~slwCVak~~-~~~~~lq~~ldyACg~gvDCs~I~~gGs-----cyspct~~~~aSyAfN~YYq~~~~~~~aCdF~G~-- 109 (177)
+++|||++++ +++++||++||||||+ +||++|++||+ ||+||++++|+|||||+|||+++++.++|||+|+
T Consensus 395 ~~~~Cv~~~~~~~~~~l~~~~~yaC~~-~dC~~I~~~g~~g~yG~~~~~~~~~~~Sya~n~yyq~~~~~~~~C~F~g~~~ 473 (555)
T 2w61_A 395 EILPCEIVPFGAESGKYEEYFSYLCSK-VDCSDILANGKTGEYGEFSDCSVEQKLSLQLSKLYCKIGANDRHCPLNDKNV 473 (555)
T ss_dssp HHCSEEECCTTCCGGGHHHHHHHHTTT-SCGGGGCEETTTTEECTTTTSCHHHHHHHHHHHHHHHHCCCSSCCSCCCTTE
T ss_pred cCCeeecCCCCCCHHHHHHHHHHHhCc-CCCccccCCCcCCCccccCCCCHHHHHHHHHHHHHHHcCCCCCCCCCCCCcc
Confidence 3589999999 9999999999999999 79999999999 6999999999999999999999999999999999
Q ss_pred ----eEEEecCCCCCceeecccc
Q 030415 110 ----ATIAKTDPSYGSCMYPSSL 128 (177)
Q Consensus 110 ----A~itt~dPS~~sC~~~~~~ 128 (177)
|+++ ++||.++|+|+.+.
T Consensus 474 ~~~~a~~~-~~~s~~~C~~~~~~ 495 (555)
T 2w61_A 474 YFNLESLQ-PLTSESICKNVFDS 495 (555)
T ss_dssp EECGGGGS-CCCTTCTTHHHHHH
T ss_pred cccceEEE-eCCCCCchHhHHHh
Confidence 9999 88999999998753
No 3
>2v33_A E1 envelope glycoprotein; transmembrane, viral protein; 1.55A {Semliki forest virus} SCOP: b.1.18.4
Probab=19.15 E-value=24 Score=25.75 Aligned_cols=27 Identities=26% Similarity=0.414 Sum_probs=21.5
Q ss_pred CCCCceEEEecCCCCCceeeccccccc
Q 030415 105 DFSGTATIAKTDPSYGSCMYPSSLRYV 131 (177)
Q Consensus 105 dF~G~A~itt~dPS~~sC~~~~~~~~~ 131 (177)
||+|.|+++......|+|...+-.+-+
T Consensus 20 DFGGvatl~Y~a~k~GkCaVHs~S~~a 46 (91)
T 2v33_A 20 DFGGVLTLTYKTNKNGDCSVHSHSNVA 46 (91)
T ss_dssp EEEEEEEEEEEESSCEEEEEECCCSSE
T ss_pred CCCCeEEEEEecCCCccceeeccCcee
Confidence 899999999877777999877765443
No 4
>1efe_A Mini-proinsulin, M2PI; linker, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.1.1.1
Probab=13.60 E-value=1.7e+02 Score=19.24 Aligned_cols=39 Identities=28% Similarity=0.451 Sum_probs=23.9
Q ss_pred HHHHHHHHHhhcCC-CCCCCccC-------CCCC----cCCCCChhhhHhH
Q 030415 50 NQALQTALDYACGT-GADCTPIQ-------PNGL----CYLPNTIQAHASY 88 (177)
Q Consensus 50 ~~~lq~~ldyACg~-gvDCs~I~-------~gGs----cyspct~~~~aSy 88 (177)
..+|-++|.++|+. |..=.+.. ..|- |+.+|+..+=.+|
T Consensus 8 G~~L~daL~~vC~~rgf~~~p~~rr~~~r~~RGIvdECC~~~Ct~~~L~~Y 58 (60)
T 1efe_A 8 GSHLVEALYLVCGERGFFYTPKTRRYPGDVKRGIVEQCCTSICSLYQLENY 58 (60)
T ss_dssp HHHHHHHHHHHHCSSCCCCCCCCCSSSCTTCCSHHHHHHHSCCCHHHHHHH
T ss_pred HHHHHHHHHHHhCcCCcccCCccccccCCCCCCcHhhcCCCCCChHHHHHh
Confidence 47899999999986 31112221 1122 7888887665544
No 5
>2gsv_A Hypothetical protein YVFG; alpha-helical protein, structural genomics, PSI, protein structure initiative; 1.90A {Bacillus subtilis} SCOP: a.23.7.1 PDB: 2js1_A
Probab=12.98 E-value=72 Score=22.36 Aligned_cols=9 Identities=44% Similarity=0.814 Sum_probs=7.4
Q ss_pred HHHhHHHHh
Q 030415 88 YAFNSYFQR 96 (177)
Q Consensus 88 yAfN~YYq~ 96 (177)
-|||+||..
T Consensus 28 hAmNaYYrs 36 (80)
T 2gsv_A 28 HAMNSYYRS 36 (80)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 389999975
No 6
>2wfu_B Probable insulin-like peptide 5 B chain; cleavage on PAIR of basic residues, signaling protein; 1.85A {Drosophila melanogaster} PDB: 2wfv_B
Probab=10.26 E-value=1.7e+02 Score=16.48 Aligned_cols=15 Identities=40% Similarity=0.598 Sum_probs=12.2
Q ss_pred HHHHHHHHHhhcCCC
Q 030415 50 NQALQTALDYACGTG 64 (177)
Q Consensus 50 ~~~lq~~ldyACg~g 64 (177)
..+|-++|+.+|+.|
T Consensus 7 G~~L~eaL~~vC~~G 21 (26)
T 2wfu_B 7 GPALMDMLRVACPNG 21 (26)
T ss_dssp HHHHHHHHHHHCSSC
T ss_pred hHHHHHHHHHHHhcc
Confidence 367889999999864
No 7
>1bqt_A Somatomedin C, insulin-like growth factor-I; NMR {Homo sapiens} SCOP: g.1.1.1 PDB: 1gzr_B* 1gzy_B* 1gzz_B* 1h02_B* 1h59_A 1imx_A* 1pmx_A 1wqj_I 2dsp_I 2dsq_I 2dsr_I 2gf1_A 3gf1_A
Probab=8.97 E-value=1.8e+02 Score=19.64 Aligned_cols=13 Identities=38% Similarity=0.843 Sum_probs=10.7
Q ss_pred HHHHHHHHhhcCC
Q 030415 51 QALQTALDYACGT 63 (177)
Q Consensus 51 ~~lq~~ldyACg~ 63 (177)
.+|-++|.++|+.
T Consensus 8 ~~L~daL~~vC~~ 20 (70)
T 1bqt_A 8 AELVDALQFVCGD 20 (70)
T ss_dssp STTHHHHHHHSCS
T ss_pred HHHHHHHHHHhCC
Confidence 4578899999986
No 8
>3j0f_E E1 envelope glycoprotein; alphavirus, virus assembly; 7.00A {Sindbis virus} PDB: 1ld4_M 1z8y_I
Probab=8.78 E-value=1.7e+02 Score=26.58 Aligned_cols=25 Identities=32% Similarity=0.452 Sum_probs=20.6
Q ss_pred CCCCceEEEecCCCCCceeeccccc
Q 030415 105 DFSGTATIAKTDPSYGSCMYPSSLR 129 (177)
Q Consensus 105 dF~G~A~itt~dPS~~sC~~~~~~~ 129 (177)
||+|.|+++......|+|...+-.+
T Consensus 311 DfGGvatl~Y~~~k~GkCaVHs~S~ 335 (439)
T 3j0f_E 311 DFGGMATLQYVSDREGQCPVHSHSS 335 (439)
T ss_pred CcCceEEEEEecCCCcccceeccCC
Confidence 8999999998877778997766553
No 9
>1b9g_A Protein (growth factor IGF-1); NMR {Homo sapiens} SCOP: g.1.1.1
Probab=8.73 E-value=1.7e+02 Score=19.21 Aligned_cols=36 Identities=22% Similarity=0.516 Sum_probs=22.7
Q ss_pred HHHHHHHHhhcCCCCCCCccCCCCC----cCCCCChhhhHhH
Q 030415 51 QALQTALDYACGTGADCTPIQPNGL----CYLPNTIQAHASY 88 (177)
Q Consensus 51 ~~lq~~ldyACg~gvDCs~I~~gGs----cyspct~~~~aSy 88 (177)
++|-++|.++|+...- -....|- |+.+|+..+=.+|
T Consensus 8 ~~L~~aL~~vC~~rgf--~~~k~GIvdECC~~~Ct~~~L~~Y 47 (57)
T 1b9g_A 8 AELVDALQFVCGDRGF--YFNKPGIVDECCFRSCDLRRLEMY 47 (57)
T ss_dssp TTHHHHHHTTCSSSSC--CTTCCSHHHHHTTSSCCSSSGGGT
T ss_pred HHHHHHHHHHHcCCCc--cCCCCCcHhhhcCCCCCHHHHHHh
Confidence 5688999999986310 0112232 8999987765554
No 10
>1i9w_A Fusion protein E1; envelope glycoprotein, membrane fusion, viral protein; 3.00A {Semliki forest virus} SCOP: b.1.18.4 f.10.1.1 PDB: 2ala_A 1rer_A
Probab=8.20 E-value=1.8e+02 Score=25.91 Aligned_cols=27 Identities=26% Similarity=0.414 Sum_probs=21.9
Q ss_pred CCCCceEEEecCCCCCceeeccccccc
Q 030415 105 DFSGTATIAKTDPSYGSCMYPSSLRYV 131 (177)
Q Consensus 105 dF~G~A~itt~dPS~~sC~~~~~~~~~ 131 (177)
||+|.|+++......|+|...+-.+.+
T Consensus 311 DfGGvat~~Y~~~k~GkCaVHs~S~~a 337 (390)
T 1i9w_A 311 DFGGVLTLTYKTNKNGDCSVHSHSNVA 337 (390)
T ss_pred CcCceEEEEEecCCCcccceeccCcce
Confidence 899999999887778999877765444
Done!