Query 030415
Match_columns 177
No_of_seqs 144 out of 741
Neff 4.5
Searched_HMMs 13730
Date Mon Mar 25 21:47:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030415.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/030415hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2v33a1 b.1.18.4 (A:293-382) F 20.0 11 0.00077 25.9 0.0 27 105-131 19-45 (90)
2 d1wqji1 g.1.1.1 (I:2-63) Insul 16.8 43 0.0031 21.1 2.5 14 50-63 6-19 (62)
3 d2gsva1 a.23.7.1 (A:3-69) Hypo 15.0 28 0.002 22.2 1.2 9 88-96 26-34 (67)
4 d2v5pc1 g.1.1.1 (C:6-63) Insul 13.0 95 0.0069 19.1 3.4 13 51-63 6-18 (58)
5 d2dlka1 g.37.1.1 (A:8-37) Zinc 10.9 40 0.0029 18.2 0.9 11 103-113 2-12 (30)
6 d1ijva_ g.9.1.1 (A:) Beta-defe 8.4 48 0.0035 18.6 0.6 12 72-83 8-20 (36)
7 d1pb5a_ g.65.1.1 (A:) Neurogen 7.7 34 0.0025 19.3 -0.3 10 59-68 25-35 (35)
8 d1nkza_ f.3.1.1 (A:) Light-har 7.1 19 0.0014 22.3 -1.8 12 37-48 3-14 (53)
9 d1ijda_ f.3.1.1 (A:) Light-har 6.1 33 0.0024 20.5 -1.0 11 38-48 4-14 (46)
10 g1mso.1 g.1.1.1 (B:,A:) Insuli 5.9 1E+02 0.0075 18.6 1.2 36 49-85 7-46 (51)
No 1
>d2v33a1 b.1.18.4 (A:293-382) Fusion glycoprotein E1 {Semliki forest virus [TaxId: 11033]}
Probab=20.02 E-value=11 Score=25.86 Aligned_cols=27 Identities=26% Similarity=0.414 Sum_probs=21.6
Q ss_pred CCCCceEEEecCCCCCceeeccccccc
Q 030415 105 DFSGTATIAKTDPSYGSCMYPSSLRYV 131 (177)
Q Consensus 105 dF~G~A~itt~dPS~~sC~~~~~~~~~ 131 (177)
||+|.|+|+......|+|...+-.+.+
T Consensus 19 DfGGvatl~Y~a~k~GkCaVHs~S~~a 45 (90)
T d2v33a1 19 DFGGVLTLTYKTNKNGDCSVHSHSNVA 45 (90)
T ss_dssp EEEEEEEEEEEESSCEEEEEECCCSSE
T ss_pred CcCCeEEEEEecCCCccceeEcCCCce
Confidence 899999999877777899877765444
No 2
>d1wqji1 g.1.1.1 (I:2-63) Insulin-like growth factor {Human (Homo sapiens) [TaxId: 9606]}
Probab=16.81 E-value=43 Score=21.05 Aligned_cols=14 Identities=36% Similarity=0.793 Sum_probs=11.8
Q ss_pred HHHHHHHHHhhcCC
Q 030415 50 NQALQTALDYACGT 63 (177)
Q Consensus 50 ~~~lq~~ldyACg~ 63 (177)
-++|-++|-++||.
T Consensus 6 Gs~LvdaL~~VCG~ 19 (62)
T d1wqji1 6 GAELVDALQFVCGD 19 (62)
T ss_dssp HHHHHHHHHHHHGG
T ss_pred hHHHHHHHHHHHcc
Confidence 36788999999985
No 3
>d2gsva1 a.23.7.1 (A:3-69) Hypothetical protein YvfG {Bacillus subtilis [TaxId: 1423]}
Probab=14.95 E-value=28 Score=22.20 Aligned_cols=9 Identities=44% Similarity=0.814 Sum_probs=7.3
Q ss_pred HHHhHHHHh
Q 030415 88 YAFNSYFQR 96 (177)
Q Consensus 88 yAfN~YYq~ 96 (177)
-|||+||..
T Consensus 26 hAmNaYYrs 34 (67)
T d2gsva1 26 HAMNSYYRS 34 (67)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 389999975
No 4
>d2v5pc1 g.1.1.1 (C:6-63) Insulin-like growth factor {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.04 E-value=95 Score=19.13 Aligned_cols=13 Identities=31% Similarity=0.777 Sum_probs=11.5
Q ss_pred HHHHHHHHhhcCC
Q 030415 51 QALQTALDYACGT 63 (177)
Q Consensus 51 ~~lq~~ldyACg~ 63 (177)
++|-++|-++||+
T Consensus 6 s~LVdaL~~VCg~ 18 (58)
T d2v5pc1 6 GELVDTLQFVCGD 18 (58)
T ss_dssp HHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHcC
Confidence 6788999999996
No 5
>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.93 E-value=40 Score=18.23 Aligned_cols=11 Identities=45% Similarity=0.972 Sum_probs=8.5
Q ss_pred CCCCCCceEEE
Q 030415 103 SCDFSGTATIA 113 (177)
Q Consensus 103 aCdF~G~A~it 113 (177)
.|||.|-+.|-
T Consensus 2 ~cdf~gc~kif 12 (30)
T d2dlka1 2 PCDFPGCGRIF 12 (30)
T ss_dssp ECSSTTTCCEE
T ss_pred CCCCCCchhhh
Confidence 49999888764
No 6
>d1ijva_ g.9.1.1 (A:) Beta-defensin, BD {Human (Homo sapiens), HBD1 [TaxId: 9606]}
Probab=8.39 E-value=48 Score=18.64 Aligned_cols=12 Identities=33% Similarity=0.639 Sum_probs=8.6
Q ss_pred CCCCc-CCCCChh
Q 030415 72 PNGLC-YLPNTIQ 83 (177)
Q Consensus 72 ~gGsc-yspct~~ 83 (177)
.||+| ||||-+.
T Consensus 8 ~gg~c~~s~cpl~ 20 (36)
T d1ijva_ 8 SGGQCLYSACPIF 20 (36)
T ss_dssp TTCEEESSCCCTT
T ss_pred CCceeccccCcce
Confidence 57777 8888653
No 7
>d1pb5a_ g.65.1.1 (A:) Neurogenic locus notch homolog protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.70 E-value=34 Score=19.32 Aligned_cols=10 Identities=60% Similarity=1.434 Sum_probs=5.3
Q ss_pred hhcC-CCCCCC
Q 030415 59 YACG-TGADCT 68 (177)
Q Consensus 59 yACg-~gvDCs 68 (177)
.||| .|.||+
T Consensus 25 haCgWDgGDCS 35 (35)
T d1pb5a_ 25 HACGWDGGDCS 35 (35)
T ss_dssp TTTTGGGGSCC
T ss_pred cccCCCCCCCC
Confidence 4565 335664
No 8
>d1nkza_ f.3.1.1 (A:) Light-harvesting complex subunits {Purple bacterium (Rhodoblastus acidophilus) [TaxId: 1074]}
Probab=7.12 E-value=19 Score=22.30 Aligned_cols=12 Identities=17% Similarity=0.437 Sum_probs=8.1
Q ss_pred CCccceEeCCCC
Q 030415 37 GNSTWCVARSDA 48 (177)
Q Consensus 37 ~~slwCVak~~~ 48 (177)
.++.|||+||.+
T Consensus 3 qgkiW~VV~PtV 14 (53)
T d1nkza_ 3 QGKIWTVVNPAI 14 (53)
T ss_dssp CTTGGGTSCHHH
T ss_pred CceEEEEECCCc
Confidence 367777777765
No 9
>d1ijda_ f.3.1.1 (A:) Light-harvesting complex subunits {Rhodoblastus acidophilus [TaxId: 1074]}
Probab=6.10 E-value=33 Score=20.52 Aligned_cols=11 Identities=18% Similarity=0.426 Sum_probs=6.8
Q ss_pred CccceEeCCCC
Q 030415 38 NSTWCVARSDA 48 (177)
Q Consensus 38 ~slwCVak~~~ 48 (177)
++.|||+||.+
T Consensus 4 gkiW~VV~Ptv 14 (46)
T d1ijda_ 4 GKIWTVVPPAF 14 (46)
T ss_dssp GGGGGTSCHHH
T ss_pred ceEEEEECCCc
Confidence 56666666654
No 10
>g1mso.1 g.1.1.1 (B:,A:) Insulin {Human (Homo sapiens) [TaxId: 9606]}
Probab=5.85 E-value=1e+02 Score=18.57 Aligned_cols=36 Identities=25% Similarity=0.267 Sum_probs=13.5
Q ss_pred CHHHHHHHHHhhcCC-CCCC---CccCCCCCcCCCCChhhh
Q 030415 49 SNQALQTALDYACGT-GADC---TPIQPNGLCYLPNTIQAH 85 (177)
Q Consensus 49 ~~~~lq~~ldyACg~-gvDC---s~I~~gGscyspct~~~~ 85 (177)
=.++|-++|-++||. |..= ++|- ..=|+.+|++.+=
T Consensus 7 CGs~LVdaL~~vCg~rGf~~~p~~GIV-eqCC~~~C~~~~L 46 (51)
T g1mso.1 7 CGSHLVEALYLVCGERGFFYTPKTGIV-EQCCTSICSLYQL 46 (51)
T ss_dssp CTHHHHHHHHHHHGGGCEEECCCC-----------------
T ss_pred ccHHHHHHHHHHHccCCcccCCCCChH-HHhcCCCCCHHHH
Confidence 357899999999985 3111 1121 1127888887653
Done!