Your job contains 1 sequence.
>030419
MEFDSEEAAKIFYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFGP
VRKPRPSTREGCKAMIHVKFDKSGKWVITKFVKEHNHPLVVAPREARQTMDEKDKKIQEL
TVELRNKKRLCALYQEQLTTFMKVVEVHSDHLSKKVQNVINNLKEFESIEKELSRNR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 030419
(177 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2041041 - symbol:AT2G43280 species:3702 "Arabi... 763 1.0e-75 1
TAIR|locus:2079651 - symbol:AT3G07500 "AT3G07500" species... 441 1.4e-41 1
TAIR|locus:2135738 - symbol:AT4G12850 "AT4G12850" species... 398 4.9e-37 1
TAIR|locus:2097543 - symbol:AT3G59470 species:3702 "Arabi... 351 4.7e-32 1
TAIR|locus:2121060 - symbol:FRS5 "FAR1-related sequence 5... 278 3.0e-30 2
TAIR|locus:2062606 - symbol:FRS2 "FAR1-related sequence 2... 216 1.5e-16 1
TAIR|locus:2014639 - symbol:FRS4 "FAR1-related sequence 4... 192 1.6e-15 2
TAIR|locus:2129665 - symbol:FAR1 "FAR-RED IMPAIRED RESPON... 187 1.9e-13 1
TAIR|locus:2082420 - symbol:FRS7 "FAR1-related sequence 7... 174 4.3e-12 1
TAIR|locus:2144930 - symbol:FRS12 "FAR1-related sequence ... 173 5.7e-12 1
TAIR|locus:2059304 - symbol:FRS3 "FAR1-related sequence 3... 161 6.0e-12 2
TAIR|locus:2090394 - symbol:FHY3 "far-red elongated hypoc... 171 1.0e-11 1
TAIR|locus:2016259 - symbol:FRS8 "FAR1-related sequence 8... 138 2.8e-08 1
TAIR|locus:2035144 - symbol:FRS6 "FAR1-related sequence 6... 132 1.2e-07 1
TAIR|locus:2012828 - symbol:FRS11 "FAR1-related sequence ... 120 3.1e-05 1
>TAIR|locus:2041041 [details] [associations]
symbol:AT2G43280 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0009639 "response to red or
far red light" evidence=ISS] [GO:0006301 "postreplication repair"
evidence=RCA] INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002685
EMBL:BT002891 EMBL:BT004409 IPI:IPI00532233 RefSeq:NP_181857.2
UniGene:At.36909 EnsemblPlants:AT2G43280.1 GeneID:818930
KEGG:ath:AT2G43280 TAIR:At2g43280 HOGENOM:HOG000090425
InParanoid:Q84J94 OMA:PREARHT PhylomeDB:Q84J94
ProtClustDB:CLSN2680222 Genevestigator:Q84J94 Uniprot:Q84J94
Length = 206
Score = 763 (273.6 bits), Expect = 1.0e-75, P = 1.0e-75
Identities = 138/175 (78%), Positives = 162/175 (92%)
Query: 3 FDSEEAAKIFYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFGPVR 62
F+SE+AAK+FYD+Y+RR+GFVMRVMSCRRSE+DGRILARR GCNKEG+CVSIRGKFG VR
Sbjct: 28 FESEDAAKMFYDDYSRRLGFVMRVMSCRRSEKDGRILARRFGCNKEGHCVSIRGKFGSVR 87
Query: 63 KPRPSTREGCKAMIHVKFDKSGKWVITKFVKEHNHPLVVAPREARQTMDEKDKKIQELTV 122
KPRPSTREGCKAMIHVK+D+SGKWVITKFVKEHNHPLVV+PREAR T+DEKDK+IQELT+
Sbjct: 88 KPRPSTREGCKAMIHVKYDRSGKWVITKFVKEHNHPLVVSPREARHTLDEKDKRIQELTI 147
Query: 123 ELRNKKRLCALYQEQLTTFMKVVEVHSDHLSKKVQNVINNLKEFESIEKELSRNR 177
ELRNKKRLCA Y+EQL F K+VE HS+ ++KKV+NV+NNLKEFE +E L R++
Sbjct: 148 ELRNKKRLCAAYKEQLDAFAKIVEEHSNQIAKKVENVVNNLKEFEHLEHALLRSK 202
>TAIR|locus:2079651 [details] [associations]
symbol:AT3G07500 "AT3G07500" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009639 "response to red or far red
light" evidence=ISS] INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002686
GenomeReviews:BA000014_GR HOGENOM:HOG000090425 EMBL:BT004031
EMBL:BT005083 IPI:IPI00525865 RefSeq:NP_187406.2 UniGene:At.48631
UniGene:At.71201 IntAct:Q84JA7 PRIDE:Q84JA7
EnsemblPlants:AT3G07500.1 GeneID:819938 KEGG:ath:AT3G07500
TAIR:At3g07500 eggNOG:NOG320386 InParanoid:Q84JA7 OMA:ERRRCTA
PhylomeDB:Q84JA7 ProtClustDB:CLSN2690766 Genevestigator:Q84JA7
Uniprot:Q84JA7
Length = 217
Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
Identities = 93/174 (53%), Positives = 122/174 (70%)
Query: 1 MEFDSEEAAKIFYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFGP 60
MEF+SEEAAK FYD YA +GFVMRV + RRS RDG ++ RRL CNKEG+ S R +
Sbjct: 37 MEFESEEAAKSFYDNYATCMGFVMRVDAFRRSMRDGTVVWRRLVCNKEGFRRS-RPRRSE 95
Query: 61 VRKPRPSTREGCKAMIHVKFDKSGKWVITKFVKEHNHPLV-VAPREAR-----QTMDEKD 114
RKPR TREGCKA+I VK +KSG W++TKF KEHNHPL+ ++P R QT DEKD
Sbjct: 96 SRKPRAITREGCKALIVVKREKSGTWLVTKFEKEHNHPLLPLSPNVRRNFQLPQTPDEKD 155
Query: 115 KKIQELTVELRNKKRLCALYQEQLTTFMKVVEVHSDHLSKKVQNVINNLKEFES 168
KI+EL+ EL ++R C Q+QL +K +E HS+HL+ + +VI ++++ ES
Sbjct: 156 AKIRELSAELSRERRRCTALQQQLDMVLKEMEEHSNHLTININSVIQSVRDIES 209
>TAIR|locus:2135738 [details] [associations]
symbol:AT4G12850 "AT4G12850" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009639 "response to red or far red
light" evidence=ISS] INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002687
EMBL:AL049640 EMBL:AL161535 HOGENOM:HOG000090425 IPI:IPI00545761
PIR:T06643 RefSeq:NP_193021.1 UniGene:At.33440 DNASU:826897
EnsemblPlants:AT4G12850.1 GeneID:826897 KEGG:ath:AT4G12850
TAIR:At4g12850 InParanoid:Q9SU01 OMA:EEIECQD PhylomeDB:Q9SU01
ProtClustDB:CLSN2916026 ArrayExpress:Q9SU01 Genevestigator:Q9SU01
Uniprot:Q9SU01
Length = 183
Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
Identities = 78/167 (46%), Positives = 118/167 (70%)
Query: 1 MEFDSEEAAKIFYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFGP 60
++F+SEE AK FY EY++R+GFV+R+M RRS DGR LARRLGCNK+G+ + +
Sbjct: 14 LKFESEEEAKDFYVEYSKRLGFVVRMMQRRRSGIDGRTLARRLGCNKQGFGPNNQRS--- 70
Query: 61 VRKPRPSTREGCKAMIHVKFDKSGKWVITKFVKEHNHPLVVAPREARQTMDEKDKKIQEL 120
S+REGCKA I VK +KSGKWV+T+F+KEHNH L + + +K++KI+EL
Sbjct: 71 -SSSSSSSREGCKATILVKMEKSGKWVVTRFIKEHNHSLQFIGSSSYDSFADKERKIKEL 129
Query: 121 TVELRNKKRLCALYQEQLTTFMKVVEVHSDHLSKKVQNVINNLKEFE 167
T E+ + RLC +Y+++L +F+ VE +++ LS KV++++ N+K+ E
Sbjct: 130 TEEIECQDRLCDVYRDRLVSFIDNVEHYTEELSLKVRDIVENVKKLE 176
>TAIR|locus:2097543 [details] [associations]
symbol:AT3G59470 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0009639 "response to red or
far red light" evidence=ISS] INTERPRO:IPR004330 Pfam:PF03101
EMBL:CP002686 EMBL:AY058089 EMBL:AY143081 IPI:IPI00519802
RefSeq:NP_001190136.1 RefSeq:NP_567085.1 UniGene:At.26657
IntAct:Q93Z68 PaxDb:Q93Z68 PRIDE:Q93Z68 EnsemblPlants:AT3G59470.1
EnsemblPlants:AT3G59470.2 GeneID:825116 KEGG:ath:AT3G59470
TAIR:At3g59470 eggNOG:NOG330011 InParanoid:Q93Z68 OMA:VENHNEM
PhylomeDB:Q93Z68 ProtClustDB:CLSN2689239 Genevestigator:Q93Z68
Uniprot:Q93Z68
Length = 251
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 78/172 (45%), Positives = 107/172 (62%)
Query: 2 EFDSEEAAKIFYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFGPV 61
EF+SE AA FY+ YA +VGFV+RV RS DG + R+L CNKEGY + K V
Sbjct: 75 EFESEAAAHGFYNAYATKVGFVIRVSKLSRSRHDGSPIGRQLVCNKEGY--RLPSKRDKV 132
Query: 62 RKPRPSTREGCKAMIHVKFDKSGKWVITKFVKEHNHPLVVAPREAR------QTMDEKDK 115
+ R TR GCKAMI ++ + SGKWVITKFVKEHNH L+ P R Q +E DK
Sbjct: 133 IRQRAETRVGCKAMILIRKENSGKWVITKFVKEHNHSLM--PGRVRRGCIYDQYPNEHDK 190
Query: 116 KIQELTVELRNKKRLCALYQEQLTTFMKVVEVHSDHLSKKVQNVINNLKEFE 167
IQEL +L +K+ A Y+ L + +E H++ LSK++Q++++N++ E
Sbjct: 191 -IQELMQQLAAEKKRAATYKRHLEMLFEQIEQHNESLSKRIQHIVDNVRNLE 241
>TAIR|locus:2121060 [details] [associations]
symbol:FRS5 "FAR1-related sequence 5" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270 EMBL:AL035538
EMBL:AL161593 InterPro:IPR018289 Pfam:PF10551 HOGENOM:HOG000241939
EMBL:AY136457 IPI:IPI00529649 PIR:T05645 RefSeq:NP_195531.1
UniGene:At.31195 UniGene:At.48951 PRIDE:Q9SZL8
EnsemblPlants:AT4G38180.1 GeneID:829974 KEGG:ath:AT4G38180
TAIR:At4g38180 eggNOG:NOG236180 InParanoid:Q9SZL8 OMA:RNNRQKS
PhylomeDB:Q9SZL8 ProtClustDB:CLSN2685396 Genevestigator:Q9SZL8
Uniprot:Q9SZL8
Length = 788
Score = 278 (102.9 bits), Expect = 3.0e-30, Sum P(2) = 3.0e-30
Identities = 55/102 (53%), Positives = 70/102 (68%)
Query: 1 MEFDSEEAAKIFYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEGY--CVSIRGKF 58
+EF+SEEAAK FY+ YARR+GF RV S RRS RDG I+ R+ C KEG+ R K
Sbjct: 77 LEFESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKD 136
Query: 59 GPVRKPRPSTREGCKAMIHVKFDKSGKWVITKFVKEHNHPLV 100
+++PR TR GCKA + VK SGKW+++ FVK+HNH LV
Sbjct: 137 REIKRPRTITRVGCKASLSVKMQDSGKWLVSGFVKDHNHELV 178
Score = 92 (37.4 bits), Expect = 3.0e-30, Sum P(2) = 3.0e-30
Identities = 22/55 (40%), Positives = 31/55 (56%)
Query: 111 DEKDKKIQELTVELRNKKRLCALYQEQLTTFMKVVEVHSDHLSKKVQNVINNLKE 165
DE DKKI +L EL R C Y+ L + +K +E +S KVQN+ +LK+
Sbjct: 732 DEMDKKINQLRNELELANRKCEAYRTNLLSVLKEMEDQKLQVSIKVQNIKISLKD 786
>TAIR|locus:2062606 [details] [associations]
symbol:FRS2 "FAR1-related sequence 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC005700
HOGENOM:HOG000090708 InterPro:IPR018289 Pfam:PF10551 EMBL:AK228730
EMBL:AK221503 IPI:IPI00520357 IPI:IPI00530517 PIR:G84730
RefSeq:NP_001077991.1 RefSeq:NP_001118431.1 RefSeq:NP_180784.2
RefSeq:NP_973580.1 UniGene:At.13189 UniGene:At.67147
EnsemblPlants:AT2G32250.1 EnsemblPlants:AT2G32250.3 GeneID:817785
KEGG:ath:AT2G32250 TAIR:At2g32250 eggNOG:NOG304016
InParanoid:Q3EBQ3 OMA:CKHAILV PhylomeDB:Q3EBQ3
ProtClustDB:CLSN2681190 Genevestigator:Q3EBQ3 Uniprot:Q3EBQ3
Length = 807
Score = 216 (81.1 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 54/144 (37%), Positives = 82/144 (56%)
Query: 1 MEFDSEEAAKIFYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFGP 60
M+F+S+EAA FY EYAR VGF + + + RRS+R G+ + ++ C++ G + R K
Sbjct: 42 MDFESKEAAYYFYREYARSVGFGITIKASRRSKRSGKFIDVKIACSRFG---TKREKATA 98
Query: 61 VRKPRPSTREGCKAMIHVKFDKSGKWVITKFVKEHNHPLVVAPREARQTMDEKDKKIQEL 120
+ PR + GCKA +H+K + KWVI FVKEHNH + P + ++ K+K L
Sbjct: 99 IN-PRSCPKTGCKAGLHMKRKEDEKWVIYNFVKEHNHE--ICPDDFYVSVRGKNKPAGAL 155
Query: 121 TVELRNKKRL-CALYQEQLTTFMK 143
+ KK L AL +E L ++
Sbjct: 156 AI----KKGLQLALEEEDLKLLLE 175
>TAIR|locus:2014639 [details] [associations]
symbol:FRS4 "FAR1-related sequence 4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC009978 EMBL:AC012394 HOGENOM:HOG000090708 InterPro:IPR018289
Pfam:PF10551 EMBL:BT010456 EMBL:AK221406 IPI:IPI00535818
IPI:IPI00657192 PIR:G96790 RefSeq:NP_001031286.1 RefSeq:NP_177759.1
UniGene:At.34672 PaxDb:Q6NQJ7 PRIDE:Q6NQJ7 GeneID:843965
KEGG:ath:AT1G76320 TAIR:At1g76320 eggNOG:NOG261993
InParanoid:Q9SGQ3 OMA:KIGCKAS ProtClustDB:CLSN2682748
Genevestigator:Q6NQJ7 Uniprot:Q6NQJ7
Length = 732
Score = 192 (72.6 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 45/129 (34%), Positives = 66/129 (51%)
Query: 1 MEFDSEEAAKIFYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFGP 60
MEF++ E A +FY +YA+ VGF +S RRS + + C + G + +
Sbjct: 1 MEFETHEDAYLFYKDYAKSVGFGTAKLSSRRSRASKEFIDAKFSCIRYGS----KQQSDD 56
Query: 61 VRKPRPSTREGCKAMIHVKFDKSGKWVITKFVKEHNHPLVVAPREARQTMDEKDKK-IQE 119
PR S + GCKA +HVK GKW + FVKEHNH L+ P +A ++ + ++
Sbjct: 57 AINPRASPKIGCKASMHVKRRPDGKWYVYSFVKEHNHDLL--PEQAHYFRSHRNTELVKS 114
Query: 120 LTVELRNKK 128
LR KK
Sbjct: 115 NDSRLRRKK 123
Score = 38 (18.4 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 135 QEQLTTFMKVVEVHSDHLSKKVQNV-INNLKEFESIEKELS 174
QE+ F V+ DHL + V V +++++S +S
Sbjct: 174 QEENPKFFFAVDFSEDHLLRNVFWVDAKGIEDYKSFSDVVS 214
>TAIR|locus:2129665 [details] [associations]
symbol:FAR1 "FAR-RED IMPAIRED RESPONSE 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=IMP] [GO:0010017 "red or far-red
light signaling pathway" evidence=IMP] [GO:0010018 "far-red light
signaling pathway" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0010218 "response
to far red light" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA;IDA] [GO:0042753
"positive regulation of circadian rhythm" evidence=IMP] [GO:0000278
"mitotic cell cycle" evidence=RCA] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=RCA] [GO:0006396 "RNA
processing" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0010212
"response to ionizing radiation" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016579 "protein deubiquitination" evidence=RCA] [GO:0048522
"positive regulation of cellular process" evidence=RCA]
InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966
SMART:SM00575 INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634
GO:GO:0045893 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003700 EMBL:AL161540 EMBL:Z97337 GO:GO:0010018
GO:GO:0042753 PIR:F71414 PIR:T02124 EMBL:AF159587 IPI:IPI00546816
RefSeq:NP_567455.4 UniGene:At.11570 IntAct:Q9SWG3 STRING:Q9SWG3
PaxDb:Q9SWG3 PRIDE:Q9SWG3 EnsemblPlants:AT4G15090.1 GeneID:827173
KEGG:ath:AT4G15090 TAIR:At4g15090 eggNOG:NOG306101
HOGENOM:HOG000090708 InParanoid:Q9SWG3 OMA:LNLMEPP PhylomeDB:Q9SWG3
ProtClustDB:CLSN2716659 Genevestigator:Q9SWG3 InterPro:IPR018289
Pfam:PF10551 Uniprot:Q9SWG3
Length = 827
Score = 187 (70.9 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 37/102 (36%), Positives = 57/102 (55%)
Query: 1 MEFDSEEAAKIFYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFGP 60
++FD+ EAA IFY EYA+ +GF + + RRS++ + + C++ G
Sbjct: 55 IDFDTHEAAYIFYQEYAKSMGFTTSIKNSRRSKKTKDFIDAKFACSRYGVTPESESSGSS 114
Query: 61 VRKPRPSTREGCKAMIHVKFDKSGKWVITKFVKEHNHPLVVA 102
R+ + CKA +HVK GKW+I +FVK+HNH L+ A
Sbjct: 115 SRRSTVKKTD-CKASMHVKRRPDGKWIIHEFVKDHNHELLPA 155
>TAIR|locus:2082420 [details] [associations]
symbol:FRS7 "FAR1-related sequence 7" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC018907
InterPro:IPR018289 Pfam:PF10551 eggNOG:NOG292373
HOGENOM:HOG000112649 ProtClustDB:CLSN2686747 EMBL:AF360270
EMBL:AY150446 IPI:IPI00534625 RefSeq:NP_566278.1 UniGene:At.19021
UniGene:At.74222 PRIDE:Q9M8J3 EnsemblPlants:AT3G06250.1
GeneID:819799 KEGG:ath:AT3G06250 TAIR:At3g06250 InParanoid:Q9M8J3
OMA:RCGNEIE PhylomeDB:Q9M8J3 Genevestigator:Q9M8J3 Uniprot:Q9M8J3
Length = 764
Score = 174 (66.3 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 41/109 (37%), Positives = 59/109 (54%)
Query: 1 MEFDSEEAAKIFYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFGP 60
+EFD+ E A+ +Y+ YA R GF +R RS DG + +RR C+KEG+ ++
Sbjct: 32 LEFDTAEEARDYYNSYATRTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGFQLN------- 84
Query: 61 VRKPRPSTREGCKAMIHVKFDKSGKWVITKFVKEHNHPLVVAPREARQT 109
+R GC A I V+ +GKWV+ + KEHNH L EA+ T
Sbjct: 85 -------SRTGCPAFIRVQRRDTGKWVLDQIQKEHNHDLGGHIEEAQTT 126
Score = 155 (59.6 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 39/106 (36%), Positives = 54/106 (50%)
Query: 1 MEFDSEEAAKIFYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFGP 60
+EF+S A FY YA VGF +R+ RS+ DG I +RR C+KEG+
Sbjct: 194 LEFNSANEACQFYQAYAEVVGFRVRIGQLFRSKVDGSITSRRFVCSKEGF---------- 243
Query: 61 VRKPRPSTREGCKAMIHVKFDKSGKWVITKFVKEHNHPLVVAPREA 106
PS R GC A + +K SG W++ + K+HNH L + A
Sbjct: 244 ---QHPS-RMGCGAYMRIKRQDSGGWIVDRLNKDHNHDLEPGKKNA 285
>TAIR|locus:2144930 [details] [associations]
symbol:FRS12 "FAR1-related sequence 12" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC068655
InterPro:IPR018289 Pfam:PF10551 IPI:IPI00546450 RefSeq:NP_197397.1
UniGene:At.22319 UniGene:At.72702 PaxDb:Q3E7I5 PRIDE:Q3E7I5
EnsemblPlants:AT5G18960.1 GeneID:832014 KEGG:ath:AT5G18960
TAIR:At5g18960 eggNOG:NOG292373 HOGENOM:HOG000112649
InParanoid:Q3E7I5 OMA:GSANEAC PhylomeDB:Q3E7I5
ProtClustDB:CLSN2686747 Genevestigator:Q3E7I5 Uniprot:Q3E7I5
Length = 788
Score = 173 (66.0 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 39/99 (39%), Positives = 55/99 (55%)
Query: 1 MEFDSEEAAKIFYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFGP 60
+EFD+ E A+ FY+ YA R GF +R RS DG + +RR C+KEG+ ++
Sbjct: 47 LEFDTAEEAREFYNAYAARTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGFQLN------- 99
Query: 61 VRKPRPSTREGCKAMIHVKFDKSGKWVITKFVKEHNHPL 99
+R GC A I V+ +GKWV+ + KEHNH L
Sbjct: 100 -------SRTGCTAFIRVQRRDTGKWVLDQIQKEHNHEL 131
Score = 149 (57.5 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 37/99 (37%), Positives = 51/99 (51%)
Query: 1 MEFDSEEAAKIFYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFGP 60
+EF S A FY YA VGF +R+ RS+ DG I +RR C++EG+
Sbjct: 215 LEFGSANEACQFYQAYAEVVGFRVRIGQLFRSKVDGSITSRRFVCSREGF---------- 264
Query: 61 VRKPRPSTREGCKAMIHVKFDKSGKWVITKFVKEHNHPL 99
PS R GC A + +K SG W++ + K+HNH L
Sbjct: 265 ---QHPS-RMGCGAYMRIKRQDSGGWIVDRLNKDHNHDL 299
>TAIR|locus:2059304 [details] [associations]
symbol:FRS3 "FAR1-related sequence 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0016558 "protein import into peroxisome matrix" evidence=RCA]
InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966
SMART:SM00575 INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0009506
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0008270 EMBL:AC005623 InterPro:IPR018289 Pfam:PF10551
EMBL:AY057491 EMBL:BT002690 IPI:IPI00526037 IPI:IPI00657216
PIR:H84668 RefSeq:NP_001031428.1 RefSeq:NP_565636.1
RefSeq:NP_850098.1 UniGene:At.22269 IntAct:Q9ZVC9 PaxDb:Q9ZVC9
PRIDE:Q9ZVC9 EnsemblPlants:AT2G27110.1 EnsemblPlants:AT2G27110.2
GeneID:817253 KEGG:ath:AT2G27110 TAIR:At2g27110 eggNOG:NOG302035
HOGENOM:HOG000241939 InParanoid:Q9ZVC9 OMA:LWPRQDE PhylomeDB:Q9ZVC9
ProtClustDB:CLSN2688464 Genevestigator:Q9ZVC9 Uniprot:Q9ZVC9
Length = 851
Score = 161 (61.7 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 39/99 (39%), Positives = 54/99 (54%)
Query: 1 MEFDSEEAAKIFYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFGP 60
MEF+SE+ AK FYDEY+R++GF +++ DG + R C+ S R K
Sbjct: 53 MEFNSEKEAKSFYDEYSRQLGFTSKLLP----RTDGSVSVREFVCSSS----SKRSK--- 101
Query: 61 VRKPRPSTREGCKAMIHVKFDKSGKWVITKFVKEHNHPL 99
R+ E C AM+ ++ KWV+TKFVKEH H L
Sbjct: 102 -RR----LSESCDAMVRIELQGHEKWVVTKFVKEHTHGL 135
Score = 37 (18.1 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 18/65 (27%), Positives = 31/65 (47%)
Query: 112 EKDKKIQELTVELRNKKRLCALYQEQLTTFMKVVEVHSDHLSKKVQNVINNLKEFESIEK 171
+ D K Q +V L R A EQL++ V V ++ K+Q+ E E ++
Sbjct: 759 DMDVKFQLSSVTLEPMLRSMAYISEQLSSPANRVAV----INLKLQDTETTTGESE-VKF 813
Query: 172 ELSRN 176
++SR+
Sbjct: 814 QVSRD 818
>TAIR|locus:2090394 [details] [associations]
symbol:FHY3 "far-red elongated hypocotyls 3" species:3702
"Arabidopsis thaliana" [GO:0004553 "hydrolase activity, hydrolyzing
O-glycosyl compounds" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009585 "red, far-red light phototransduction" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=IMP] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0010017 "red or far-red light signaling pathway"
evidence=IMP] [GO:0010218 "response to far red light" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0042753 "positive regulation of circadian rhythm"
evidence=IMP] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006487 "protein N-linked glycosylation"
evidence=RCA] [GO:0008284 "positive regulation of cell
proliferation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0009639 "response to red or far red light"
evidence=RCA] InterPro:IPR001000 InterPro:IPR006564
InterPro:IPR007527 PROSITE:PS50966 SMART:SM00575 INTERPRO:IPR004330
Pfam:PF03101 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0045893 GO:GO:0046872 GO:GO:0005975 GO:GO:0007623
GO:GO:0004553 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0010218 GO:GO:0009585 GO:GO:0042753 HOGENOM:HOG000090708
InterPro:IPR018289 Pfam:PF10551 EMBL:AP001306 IPI:IPI00519965
RefSeq:NP_001118673.1 RefSeq:NP_188856.2 UniGene:At.27725
STRING:Q9LIE5 PaxDb:Q9LIE5 PRIDE:Q9LIE5 EnsemblPlants:AT3G22170.1
EnsemblPlants:AT3G22170.2 GeneID:821781 KEGG:ath:AT3G22170
TAIR:At3g22170 eggNOG:NOG45392 InParanoid:Q9LIE5 OMA:ITHAERV
PhylomeDB:Q9LIE5 ProtClustDB:PLN03097 Genevestigator:Q9LIE5
Uniprot:Q9LIE5
Length = 839
Score = 171 (65.3 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 49/156 (31%), Positives = 72/156 (46%)
Query: 1 MEFDSEEAAKIFYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEG----YCVSIRG 56
MEF+S A FY EY+R +GF + + RRS+ + + C++ G Y S
Sbjct: 74 MEFESHGEAYSFYQEYSRAMGFNTAIQNSRRSKTTREFIDAKFACSRYGTKREYDKSFNR 133
Query: 57 KFGPVRKPRPSTREG--------CKAMIHVKFDKSGKWVITKFVKEHNHPLVVAPREARQ 108
K P G CKA +HVK GKWVI FV+EHNH L+ A Q
Sbjct: 134 PRARQSKQDPENMAGRRTCAKTDCKASMHVKRRPDGKWVIHSFVREHNHELLPA-----Q 188
Query: 109 TMDEKDKKIQE-LTVELRNKKRLCALYQEQLTTFMK 143
+ E+ +KI + + K + +L + ++F K
Sbjct: 189 AVSEQTRKIYAAMAKQFAEYKTVISLKSDSKSSFEK 224
>TAIR|locus:2016259 [details] [associations]
symbol:FRS8 "FAR1-related sequence 8" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0050665
"hydrogen peroxide biosynthetic process" evidence=RCA]
InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966
SMART:SM00575 INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC009322 EMBL:AC011717 InterPro:IPR018289 Pfam:PF10551
HOGENOM:HOG000112651 IPI:IPI00534750 PIR:E96831 RefSeq:NP_178118.2
UniGene:At.52575 PRIDE:Q9S793 EnsemblPlants:AT1G80010.1
GeneID:844341 KEGG:ath:AT1G80010 TAIR:At1g80010 eggNOG:NOG311954
InParanoid:Q9S793 OMA:FAIRVKS Genevestigator:Q9S793 Uniprot:Q9S793
Length = 725
Score = 138 (53.6 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 36/115 (31%), Positives = 57/115 (49%)
Query: 1 MEFDSEEAAKIFYDEYARRVGFVMRVMSC--RRSERDGRILARRLGCNKEGYCVSIRGKF 58
MEF+S + A FY+ YAR +GF +RV S +R+ ++ R L CN +G+ +
Sbjct: 99 MEFESYDDAYSFYNSYARELGFAIRVKSSWTKRNSKEKR--GAVLCCNCQGFKL-----L 151
Query: 59 GPVRKPRPSTREGCKAMIHVKFDKSGKWVITKFVKEHNHPLVVAPREARQTMDEK 113
R TR GC+AMI ++ +W + + +HNH P+ A + K
Sbjct: 152 KDAHSRRKETRTGCQAMIRLRLIHFDRWKVDQVKLDHNHSF--DPQRAHNSKSHK 204
>TAIR|locus:2035144 [details] [associations]
symbol:FRS6 "FAR1-related sequence 6" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC008016 InterPro:IPR018289 Pfam:PF10551 EMBL:AY080775
EMBL:AY133776 IPI:IPI00532825 PIR:G96565 RefSeq:NP_175661.1
UniGene:At.37583 PRIDE:Q9SSQ4 EnsemblPlants:AT1G52520.1
GeneID:841683 KEGG:ath:AT1G52520 TAIR:At1g52520 eggNOG:NOG287780
HOGENOM:HOG000112651 InParanoid:Q9SSQ4 OMA:LELMCCK PhylomeDB:Q9SSQ4
ProtClustDB:CLSN2679731 Genevestigator:Q9SSQ4 Uniprot:Q9SSQ4
Length = 703
Score = 132 (51.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 36/103 (34%), Positives = 55/103 (53%)
Query: 1 MEFDSEEAAKIFYDEYARRVGFVMRVMSC---RRS-ERDGRILARRLGCNKEGYCVSIRG 56
MEF+S + A +Y+ YA VGF +RV + RRS E+ G +L C+ +G+
Sbjct: 89 MEFESYDDAYNYYNCYASEVGFRVRVKNSWFKRRSKEKYGAVLC----CSSQGF-----K 139
Query: 57 KFGPVRKPRPSTREGCKAMIHVKFDKSGKWVITKFVKEHNHPL 99
+ V + R TR GC AMI ++ S +W + + +HNH L
Sbjct: 140 RINDVNRVRKETRTGCPAMIRMRQVDSKRWRVVEVTLDHNHLL 182
>TAIR|locus:2012828 [details] [associations]
symbol:FRS11 "FAR1-related sequence 11" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC005489 InterPro:IPR018289 Pfam:PF10551 HOGENOM:HOG000006468
ProtClustDB:CLSN2687754 EMBL:AF424595 EMBL:BT000486 IPI:IPI00517858
RefSeq:NP_563865.1 UniGene:At.26302 IntAct:Q9SY66 PaxDb:Q9SY66
PRIDE:Q9SY66 EnsemblPlants:AT1G10240.1 GeneID:837563
KEGG:ath:AT1G10240 TAIR:At1g10240 eggNOG:NOG258635
InParanoid:Q9SY66 OMA:IRRHRTE PhylomeDB:Q9SY66
Genevestigator:Q9SY66 Uniprot:Q9SY66
Length = 680
Score = 120 (47.3 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 44/181 (24%), Positives = 82/181 (45%)
Query: 3 FDSEEAAKIFYDEYARRVGFVMRVMSCRRSERDGRILARR-LGCNKEGYCVSIRGKFGPV 61
F + + A FY +A+R GF +R + G+ L RR C++ G G
Sbjct: 54 FLTHDTAYEFYSTFAKRCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPIKTLSEGKP 113
Query: 62 RKPRPSTREGCKAMIHV-KFDKSG--KWVITKFVKEHNHPLVVAPREAR-----QTMDEK 113
++ R S+R GC+A + + K + G +W +T F HNH L+ P + R +++ +
Sbjct: 114 QRNRRSSRCGCQAYLRISKLTELGSTEWRVTGFANHHNHELL-EPNQVRFLPAYRSISDA 172
Query: 114 DKKIQELTVELRNKKRLCALYQEQLTTFMKVVEV-HSDHLSKKVQNVINNLKEFESIEKE 172
DK + + +K + +L K VE K V+N++ + K+ + ++
Sbjct: 173 DKS----RILMFSKTGISVQQMMRLLELEKCVEPGFLPFTEKDVRNLLQSFKKLDPEDEN 228
Query: 173 L 173
+
Sbjct: 229 I 229
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.391 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 177 177 0.00084 109 3 11 22 0.39 32
31 0.50 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 15
No. of states in DFA: 593 (63 KB)
Total size of DFA: 154 KB (2093 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.50u 0.14s 20.64t Elapsed: 00:00:01
Total cpu time: 20.50u 0.14s 20.64t Elapsed: 00:00:01
Start: Sat May 11 00:20:21 2013 End: Sat May 11 00:20:22 2013