BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030419
(177 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SZL8|FRS5_ARATH Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5
PE=2 SV=1
Length = 788
Score = 96.3 bits (238), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 70/102 (68%), Gaps = 2/102 (1%)
Query: 1 MEFDSEEAAKIFYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEGY--CVSIRGKF 58
+EF+SEEAAK FY+ YARR+GF RV S RRS RDG I+ R+ C KEG+ R K
Sbjct: 77 LEFESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKD 136
Query: 59 GPVRKPRPSTREGCKAMIHVKFDKSGKWVITKFVKEHNHPLV 100
+++PR TR GCKA + VK SGKW+++ FVK+HNH LV
Sbjct: 137 REIKRPRTITRVGCKASLSVKMQDSGKWLVSGFVKDHNHELV 178
Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%)
Query: 111 DEKDKKIQELTVELRNKKRLCALYQEQLTTFMKVVEVHSDHLSKKVQNVINNLKE 165
DE DKKI +L EL R C Y+ L + +K +E +S KVQN+ +LK+
Sbjct: 732 DEMDKKINQLRNELELANRKCEAYRTNLLSVLKEMEDQKLQVSIKVQNIKISLKD 786
>sp|Q3EBQ3|FRS2_ARATH Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis thaliana GN=FRS2
PE=2 SV=1
Length = 807
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
Query: 1 MEFDSEEAAKIFYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFGP 60
M+F+S+EAA FY EYAR VGF + + + RRS+R G+ + ++ C++ G + R K
Sbjct: 42 MDFESKEAAYYFYREYARSVGFGITIKASRRSKRSGKFIDVKIACSRFG---TKREKATA 98
Query: 61 VRKPRPSTREGCKAMIHVKFDKSGKWVITKFVKEHNHPLVVAPREARQTMDEKDKKIQEL 120
+ PR + GCKA +H+K + KWVI FVKEHNH + P + ++ K+K L
Sbjct: 99 I-NPRSCPKTGCKAGLHMKRKEDEKWVIYNFVKEHNHE--ICPDDFYVSVRGKNKPAGAL 155
Query: 121 TV 122
+
Sbjct: 156 AI 157
>sp|Q9M8J3|FRS7_ARATH Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana GN=FRS7
PE=2 SV=1
Length = 764
Score = 77.0 bits (188), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 14/109 (12%)
Query: 1 MEFDSEEAAKIFYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFGP 60
+EFD+ E A+ +Y+ YA R GF +R RS DG + +RR C+KEG+ +
Sbjct: 32 LEFDTAEEARDYYNSYATRTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGFQL-------- 83
Query: 61 VRKPRPSTREGCKAMIHVKFDKSGKWVITKFVKEHNHPLVVAPREARQT 109
++R GC A I V+ +GKWV+ + KEHNH L EA+ T
Sbjct: 84 ------NSRTGCPAFIRVQRRDTGKWVLDQIQKEHNHDLGGHIEEAQTT 126
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 52/99 (52%), Gaps = 14/99 (14%)
Query: 1 MEFDSEEAAKIFYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFGP 60
+EF+S A FY YA VGF +R+ RS+ DG I +RR C+KEG+
Sbjct: 194 LEFNSANEACQFYQAYAEVVGFRVRIGQLFRSKVDGSITSRRFVCSKEGF---------- 243
Query: 61 VRKPRPSTREGCKAMIHVKFDKSGKWVITKFVKEHNHPL 99
PS R GC A + +K SG W++ + K+HNH L
Sbjct: 244 ---QHPS-RMGCGAYMRIKRQDSGGWIVDRLNKDHNHDL 278
>sp|Q3E7I5|FRS12_ARATH Protein FAR1-RELATED SEQUENCE 12 OS=Arabidopsis thaliana GN=FRS12
PE=2 SV=1
Length = 788
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 55/99 (55%), Gaps = 14/99 (14%)
Query: 1 MEFDSEEAAKIFYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFGP 60
+EFD+ E A+ FY+ YA R GF +R RS DG + +RR C+KEG+ +
Sbjct: 47 LEFDTAEEAREFYNAYAARTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGFQL-------- 98
Query: 61 VRKPRPSTREGCKAMIHVKFDKSGKWVITKFVKEHNHPL 99
++R GC A I V+ +GKWV+ + KEHNH L
Sbjct: 99 ------NSRTGCTAFIRVQRRDTGKWVLDQIQKEHNHEL 131
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 51/99 (51%), Gaps = 14/99 (14%)
Query: 1 MEFDSEEAAKIFYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFGP 60
+EF S A FY YA VGF +R+ RS+ DG I +RR C++EG+
Sbjct: 215 LEFGSANEACQFYQAYAEVVGFRVRIGQLFRSKVDGSITSRRFVCSREGF---------- 264
Query: 61 VRKPRPSTREGCKAMIHVKFDKSGKWVITKFVKEHNHPL 99
PS R GC A + +K SG W++ + K+HNH L
Sbjct: 265 ---QHPS-RMGCGAYMRIKRQDSGGWIVDRLNKDHNHDL 299
>sp|Q6NQJ7|FRS4_ARATH Protein FAR1-RELATED SEQUENCE 4 OS=Arabidopsis thaliana GN=FRS4
PE=2 SV=2
Length = 732
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 57/106 (53%), Gaps = 6/106 (5%)
Query: 1 MEFDSEEAAKIFYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFGP 60
MEF++ E A +FY +YA+ VGF +S RRS + + C + G + +
Sbjct: 1 MEFETHEDAYLFYKDYAKSVGFGTAKLSSRRSRASKEFIDAKFSCIRYG----SKQQSDD 56
Query: 61 VRKPRPSTREGCKAMIHVKFDKSGKWVITKFVKEHNHPLVVAPREA 106
PR S + GCKA +HVK GKW + FVKEHNH L+ P +A
Sbjct: 57 AINPRASPKIGCKASMHVKRRPDGKWYVYSFVKEHNHDLL--PEQA 100
>sp|Q9SWG3|FAR1_ARATH Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana GN=FAR1
PE=1 SV=1
Length = 827
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Query: 1 MEFDSEEAAKIFYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFGP 60
++FD+ EAA IFY EYA+ +GF + + RRS++ + + C++ G G
Sbjct: 55 IDFDTHEAAYIFYQEYAKSMGFTTSIKNSRRSKKTKDFIDAKFACSRYG-VTPESESSGS 113
Query: 61 VRKPRPSTREGCKAMIHVKFDKSGKWVITKFVKEHNHPLVVA 102
+ + CKA +HVK GKW+I +FVK+HNH L+ A
Sbjct: 114 SSRRSTVKKTDCKASMHVKRRPDGKWIIHEFVKDHNHELLPA 155
>sp|Q5UBY2|FRS1_ARATH Protein FAR1-RELATED SEQUENCE 1 OS=Arabidopsis thaliana GN=FRS1
PE=1 SV=1
Length = 687
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 16/119 (13%)
Query: 2 EFDSEEAAKIFYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNK-------------- 47
EF+S+E A FY EYA VGF + + RRS G+ + + C +
Sbjct: 26 EFESKEEAFEFYKEYANSVGFTTIIKASRRSRMTGKFIDAKFVCTRYGSKKEDIDTGLGT 85
Query: 48 EGYCVSIRGKFGPVRKPRPSTREGCKAMIHVKFDKSGKWVITKFVKEHNHPLVVAPREA 106
+G+ + K G R R S++ CKA +HVK + G+WV+ VKEHNH + ++
Sbjct: 86 DGFNIPQARKRG--RINRSSSKTDCKAFLHVKRRQDGRWVVRSLVKEHNHEIFTGQADS 142
>sp|Q9LIE5|FHY3_ARATH Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidopsis thaliana
GN=FHY3 PE=1 SV=1
Length = 839
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 57/121 (47%), Gaps = 12/121 (9%)
Query: 1 MEFDSEEAAKIFYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFGP 60
MEF+S A FY EY+R +GF + + RRS+ + + C++ G F
Sbjct: 74 MEFESHGEAYSFYQEYSRAMGFNTAIQNSRRSKTTREFIDAKFACSRYGTKREYDKSFNR 133
Query: 61 VR----KPRPSTREG--------CKAMIHVKFDKSGKWVITKFVKEHNHPLVVAPREARQ 108
R K P G CKA +HVK GKWVI FV+EHNH L+ A + Q
Sbjct: 134 PRARQSKQDPENMAGRRTCAKTDCKASMHVKRRPDGKWVIHSFVREHNHELLPAQAVSEQ 193
Query: 109 T 109
T
Sbjct: 194 T 194
>sp|Q9ZVC9|FRS3_ARATH Protein FAR1-RELATED SEQUENCE 3 OS=Arabidopsis thaliana GN=FRS3
PE=2 SV=2
Length = 851
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 16/100 (16%)
Query: 1 MEFDSEEAAKIFYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFGP 60
MEF+SE+ AK FYDEY+R++GF +++ DG + R C+
Sbjct: 53 MEFNSEKEAKSFYDEYSRQLGFTSKLLP----RTDGSVSVREFVCSSS------------ 96
Query: 61 VRKPRPSTREGCKAMIHVKFDKSGKWVITKFVKEHNHPLV 100
++ + E C AM+ ++ KWV+TKFVKEH H L
Sbjct: 97 SKRSKRRLSESCDAMVRIELQGHEKWVVTKFVKEHTHGLA 136
>sp|Q9S793|FRS8_ARATH Protein FAR1-RELATED SEQUENCE 8 OS=Arabidopsis thaliana GN=FRS8
PE=2 SV=2
Length = 725
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
Query: 1 MEFDSEEAAKIFYDEYARRVGFVMRVMS--CRRSERDGRILARRLGCNKEGYCVSIRGKF 58
MEF+S + A FY+ YAR +GF +RV S +R+ ++ R L CN +G+ +
Sbjct: 99 MEFESYDDAYSFYNSYARELGFAIRVKSSWTKRNSKEKR--GAVLCCNCQGFKL-----L 151
Query: 59 GPVRKPRPSTREGCKAMIHVKFDKSGKWVITKFVKEHNH 97
R TR GC+AMI ++ +W + + +HNH
Sbjct: 152 KDAHSRRKETRTGCQAMIRLRLIHFDRWKVDQVKLDHNH 190
>sp|Q9SSQ4|FRS6_ARATH Protein FAR1-RELATED SEQUENCE 6 OS=Arabidopsis thaliana GN=FRS6
PE=2 SV=1
Length = 703
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 1 MEFDSEEAAKIFYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFGP 60
MEF+S + A +Y+ YA VGF +RV + R L C+ +G+ +
Sbjct: 89 MEFESYDDAYNYYNCYASEVGFRVRVKNSWFKRRSKEKYGAVLCCSSQGF-----KRIND 143
Query: 61 VRKPRPSTREGCKAMIHVKFDKSGKWVITKFVKEHNHPL 99
V + R TR GC AMI ++ S +W + + +HNH L
Sbjct: 144 VNRVRKETRTGCPAMIRMRQVDSKRWRVVEVTLDHNHLL 182
>sp|Q9SY66|FRS11_ARATH Protein FAR1-RELATED SEQUENCE 11 OS=Arabidopsis thaliana GN=FRS11
PE=2 SV=1
Length = 680
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 21/178 (11%)
Query: 3 FDSEEAAKIFYDEYARRVGFVMRVMSCRRSERDGRILARR-LGCNKEGYCVSIRGKFGPV 61
F + + A FY +A+R GF +R + G+ L RR C++ G G
Sbjct: 54 FLTHDTAYEFYSTFAKRCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPIKTLSEGKP 113
Query: 62 RKPRPSTREGCKAMIHV-KFDKSG--KWVITKFVKEHNHPLVVAPREAR-----QTMDEK 113
++ R S+R GC+A + + K + G +W +T F HNH L + P + R +++ +
Sbjct: 114 QRNRRSSRCGCQAYLRISKLTELGSTEWRVTGFANHHNHEL-LEPNQVRFLPAYRSISDA 172
Query: 114 DKK----IQELTVELRNKKRLCALYQEQLTTFMKVVEVHSDHLSKKVQNVINNLKEFE 167
DK + + ++ RL L + F+ E K V+N++ + K+ +
Sbjct: 173 DKSRILMFSKTGISVQQMMRLLELEKCVEPGFLPFTE-------KDVRNLLQSFKKLD 223
>sp|Q9SZL7|FRS9_ARATH Protein FAR1-RELATED SEQUENCE 9 OS=Arabidopsis thaliana GN=FRS9
PE=2 SV=2
Length = 545
Score = 40.0 bits (92), Expect = 0.009, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Query: 105 EARQTMD-------EKDKKIQELTVELRNKKRLCALYQEQLTTFMKVVEVHSDHLSKKVQ 157
EAR+T + EK++ I ELT EL + C +Y+ L + ++ +E LS KVQ
Sbjct: 478 EARETANATNHPGGEKERTILELTAELERTGQRCEVYRANLLSILRDMEEQKFQLSLKVQ 537
Query: 158 NVINNLKE 165
N +LKE
Sbjct: 538 NARLSLKE 545
>sp|Q9LKR4|FRS10_ARATH Putative protein FAR1-RELATED SEQUENCE 10 OS=Arabidopsis thaliana
GN=FRS10 PE=2 SV=2
Length = 685
Score = 38.9 bits (89), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 8/103 (7%)
Query: 3 FDSEEAAKIFYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFGPVR 62
F +++ A +Y +AR+ GF +R S+ G + R C + G+ + K V
Sbjct: 61 FTTDDEAFEYYSTFARKSGFSIRKARSTESQNLG-VYRRDFVCYRSGF--NQPRKKANVE 117
Query: 63 KPRP--STREGCKAMIHVK---FDKSGKWVITKFVKEHNHPLV 100
PR S R GC +++ D W +++F HNH L+
Sbjct: 118 HPRERKSVRCGCDGKLYLTKEVVDGVSHWYVSQFSNVHNHELL 160
>sp|B5ZPG3|HEMH_RHILW Ferrochelatase OS=Rhizobium leguminosarum bv. trifolii (strain
WSM2304) GN=hemH PE=3 SV=1
Length = 344
Score = 34.3 bits (77), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 33 ERDGRILARRLGCNKEGYCVSIRGKFGPVRKPRPST 68
++ GR+L RLG KE + V+ + +FGP +P T
Sbjct: 232 QKTGRLLRERLGLTKENFMVTFQSRFGPEEWLQPYT 267
>sp|Q1MBW8|HEMH_RHIL3 Ferrochelatase OS=Rhizobium leguminosarum bv. viciae (strain 3841)
GN=hemH PE=3 SV=1
Length = 344
Score = 34.3 bits (77), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 33 ERDGRILARRLGCNKEGYCVSIRGKFGPVRKPRPST 68
++ GR+L RLG KE + V+ + +FGP +P T
Sbjct: 232 QKTGRLLRERLGLTKENFLVTFQSRFGPEEWLQPYT 267
>sp|Q18GQ9|RFCL_HALWD Replication factor C large subunit OS=Haloquadratum walsbyi (strain
DSM 16790) GN=rfcL PE=3 SV=1
Length = 516
Score = 33.5 bits (75), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 11/94 (11%)
Query: 76 IHVKFDKSGKWVITKFVKEHNHPLVVAP----------REARQTMDEKDKKIQELTVELR 125
IH ++D+ GK +T +K+ N P+V+ R A Q ++ +D + + LR
Sbjct: 114 IHYQYDRGGKQAVTTLLKDANQPIVLIANEYYDMSRGLRNAAQDIEFRDISARSIVPVLR 173
Query: 126 NKKRLCALYQEQLTTFMKVVEVHSDHLSKKVQNV 159
N R + E+ ++ EV+S L ++++
Sbjct: 174 NILRKENIEFEE-AALKQIAEVNSGDLRAAIKDL 206
>sp|Q2K4C4|HEMH_RHIEC Ferrochelatase OS=Rhizobium etli (strain CFN 42 / ATCC 51251)
GN=hemH PE=3 SV=1
Length = 344
Score = 33.1 bits (74), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 33 ERDGRILARRLGCNKEGYCVSIRGKFGPVRKPRPST 68
++ GR+L RLG +E + V+ + +FGP +P T
Sbjct: 232 QKTGRLLRERLGLTQENFMVTFQSRFGPEEWLQPYT 267
>sp|B3PZU8|HEMH_RHIE6 Ferrochelatase OS=Rhizobium etli (strain CIAT 652) GN=hemH PE=3
SV=1
Length = 344
Score = 33.1 bits (74), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 10/58 (17%)
Query: 33 ERDGRILARRLGCNKEGYCVSIRGKFGPVRKPRPST--------REGCK--AMIHVKF 80
++ GR+L RLG +E + V+ + +FGP +P T R+G K A+I+ F
Sbjct: 232 QKTGRLLRERLGLTQENFMVTFQSRFGPEEWLQPYTDKTVEKLARDGVKRIAVINPGF 289
>sp|Q8K4J6|MKL1_MOUSE MKL/myocardin-like protein 1 OS=Mus musculus GN=Mkl1 PE=1 SV=2
Length = 964
Score = 32.0 bits (71), Expect = 2.1, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 108 QTMDEKDKKIQELTVELRNKKRLCALYQEQL 138
Q + EKDK+I+ELT L+ K++L L + QL
Sbjct: 562 QMLQEKDKQIEELTRMLQQKQQLVELLRLQL 592
>sp|A1U0R2|HEMH_MARAV Ferrochelatase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM
11845 / VT8) GN=hemH PE=3 SV=1
Length = 370
Score = 30.8 bits (68), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 37 RILARRLGCNKEGYCVSIRGKFGPVRKPRPSTREGCKAM 75
R+LA RLG K+ Y + + +FG +P T E KA+
Sbjct: 232 RLLAERLGLGKDQYMTTFQSRFGREEWLQPYTDETLKAL 270
>sp|Q92JK8|CLPB_RICCN Chaperone protein ClpB OS=Rickettsia conorii (strain ATCC VR-613 /
Malish 7) GN=clpB PE=3 SV=1
Length = 857
Score = 30.8 bits (68), Expect = 5.2, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 108 QTMDEKDKKIQELTVELRNKKRLCALYQ----EQLTTFMKVVEVHSDHLSKKVQNVINNL 163
+ +DE D++I ++ +EL K+ + E LTT ++ +E S + K Q + L
Sbjct: 411 EELDELDRRIIQIKIELAALKKENDEHSKKKIEHLTTALEKLESQSYDMGAKWQAEKSKL 470
Query: 164 KEFESIEKELSRNR 177
++ + +++EL R+R
Sbjct: 471 QQTQKLKEELDRSR 484
>sp|Q8SQK7|NUF2_ENCCU Probable kinetochore protein NUF2 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=NUF2 PE=3 SV=1
Length = 439
Score = 30.0 bits (66), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 14/61 (22%), Positives = 37/61 (60%), Gaps = 11/61 (18%)
Query: 99 LVVAPREARQTMDEKDKKIQELTVELRNKKRLCALYQEQLTTFMKVVEVHSDHLSKKVQN 158
L ++ REA +T+D+ +++I EL V+++N L + + +++ +H+S+++ +
Sbjct: 291 LAISNREADKTIDKTNREISELEVQMKN-----------LDSGINALKIRLNHVSRQISH 339
Query: 159 V 159
+
Sbjct: 340 I 340
>sp|P54697|MYOJ_DICDI Myosin-J heavy chain OS=Dictyostelium discoideum GN=myoJ PE=4 SV=2
Length = 2245
Score = 29.6 bits (65), Expect = 9.6, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 50/107 (46%), Gaps = 13/107 (12%)
Query: 82 KSGKWVITKF--VKEHNHPLVVAPREARQ-----------TMDEKDKKIQELTVELRNKK 128
+ +WV F +K+ N L+ + +Q T+ EK+ +I +L +L
Sbjct: 1610 QHSQWVENSFTDMKQRNQELIESSALYKQQLLQQTSTIDSTIKEKENEISKLQQQLETSN 1669
Query: 129 RLCALYQEQLTTFMKVVEVHSDHLSKKVQNVINNLKEFESIEKELSR 175
+ +E+L + + ++ S SK++ +I ++ +S+ E+S+
Sbjct: 1670 QQLHQLKEELNSMKQSNQLESTEQSKQLNQLIQENQQLKSVTNEISK 1716
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,324,244
Number of Sequences: 539616
Number of extensions: 2450940
Number of successful extensions: 9064
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 66
Number of HSP's that attempted gapping in prelim test: 8963
Number of HSP's gapped (non-prelim): 154
length of query: 177
length of database: 191,569,459
effective HSP length: 110
effective length of query: 67
effective length of database: 132,211,699
effective search space: 8858183833
effective search space used: 8858183833
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)