BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030422
(177 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A6QQC0|AHSA2_BOVIN Activator of 90 kDa heat shock protein ATPase homolog 2 OS=Bos
taurus GN=AHSA2 PE=2 SV=1
Length = 260
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 9/122 (7%)
Query: 21 WNRLDPTFRSE-----CTVEAGTWEEKSLNKWASDRIKELLTSVGSVEFSGGKAEITEVS 75
W + DP + E V W E+ W+ R++ELL + +VE G+ EI+E+
Sbjct: 4 WGQGDPRWIVEEREDGTNVNNWHWTERDATSWSKGRLRELLVGI-TVENEAGRCEISELK 62
Query: 76 NCVGDAFLVTVRNKKRVGYNYELTLKVRGEWNIREEKKMVKGHIDIPEFS-FGELDDLQM 134
G+A + + K Y + + L +G IRE KG I+IP S E+DD ++
Sbjct: 63 QVEGEASCSSRKGKLIFFYEWNIKLGWKG--IIRESGAKHKGLIEIPSLSEENEVDDTEV 120
Query: 135 QV 136
V
Sbjct: 121 NV 122
>sp|O95433|AHSA1_HUMAN Activator of 90 kDa heat shock protein ATPase homolog 1 OS=Homo
sapiens GN=AHSA1 PE=1 SV=1
Length = 338
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 87/163 (53%), Gaps = 18/163 (11%)
Query: 21 WNRLDPTF----RSECT-VEAGTWEEKSLNKWASDRIKELLTSVGSVEFSGGKAEITEVS 75
W DP + R++ T V W E+ + W++D++K L +V V+ GK E+TEVS
Sbjct: 4 WGEGDPRWIVEERADATNVNNWHWTERDASNWSTDKLKTLFLAV-QVQNEEGKCEVTEVS 62
Query: 76 NCVGDAFLVTVRNKK-RVGYNYELTLKVRGEWNIREEKKM-VKGHIDIPEFS-FGELDDL 132
G+A ++ N+K ++ + YE ++K+ W + + KGH++IP S +D++
Sbjct: 63 KLDGEA---SINNRKGKLIFFYEWSVKLN--WTGTSKSGVQYKGHVEIPNLSDENSVDEV 117
Query: 133 QMQVRISEEKDLSKEDKLQISQDLKMFLQPVREKLLLFEQELK 175
++ V +++++ + L + +K+ +RE + ++ LK
Sbjct: 118 EISVSLAKDEPDTNLVALMKEEGVKL----LREAMGIYISTLK 156
>sp|Q8BK64|AHSA1_MOUSE Activator of 90 kDa heat shock protein ATPase homolog 1 OS=Mus
musculus GN=Ahsa1 PE=2 SV=2
Length = 338
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 80/146 (54%), Gaps = 20/146 (13%)
Query: 21 WNRLDPTF----RSECT-VEAGTWEEKSLNKWASDRIKELLTSVGSVEFSGGKAEITEVS 75
W DP + R++ T V W E+ + W+++++K L +V VE GK E+TEV+
Sbjct: 4 WGEGDPRWIVEERADATNVNNWHWTERDASNWSTEKLKTLFLAV-RVENEEGKCEVTEVN 62
Query: 76 NCVGDAFLVTVRNKK-RVGYNYELTLKVRGEWNIREEKKM-VKGHIDIPEFS-FGELDDL 132
G+A ++ N+K ++ + YE T+K+ W + + KGH++IP S +D++
Sbjct: 63 KLDGEA---SINNRKGKLIFFYEWTIKLN--WTGTSKSGVQYKGHVEIPNLSDENSVDEV 117
Query: 133 QMQVRISEEKD------LSKEDKLQI 152
++ V +++++ L KED +++
Sbjct: 118 EISVSLAKDEPDTNLVALMKEDGVKL 143
>sp|Q8N9S3|AHSA2_MOUSE Activator of 90 kDa heat shock protein ATPase homolog 2 OS=Mus
musculus GN=Ahsa2 PE=2 SV=2
Length = 331
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 9/122 (7%)
Query: 21 WNRLDPTFRSE-----CTVEAGTWEEKSLNKWASDRIKELLTSVGSVEFSGGKAEITEVS 75
W + DP + E V W E+ W+ +++ELL + ++E G+ EI+E+
Sbjct: 4 WGQGDPRWIVEEREDGTNVNNWHWTERDATIWSKGKLRELLVGI-AMENEAGRCEISELK 62
Query: 76 NCVGDAFLVTVRNKKRVGYNYELTLKVRGEWNIREEKKMVKGHIDIPEFS-FGELDDLQM 134
G+A + + K Y + + L +G ++E KG I+IP S E++D ++
Sbjct: 63 QVEGEASCNSRKGKLIFFYEWNIKLAWKG--TVKESGAKHKGLIEIPSLSEENEINDTEV 120
Query: 135 QV 136
V
Sbjct: 121 NV 122
>sp|P53834|HCH1_YEAST Hsp90 co-chaperone HCH1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=HCH1 PE=1 SV=1
Length = 153
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 39 WEEKSLNKWASDRIKELLTSVGSVEFSG-GKAEITEVSNCVGDAFLVTVRNKKRVGYNYE 97
W +K+ W+ D + LTS+ +V G K E+T+VS+ GD+ + + K ++ +
Sbjct: 11 WVDKNTLPWSKDYLNGKLTSLSTVSSDGKSKIELTQVSSITGDSNVSQRKGKPICYFDLQ 70
Query: 98 LTLKVRGEWNIREEKK-------MVKGHIDIPEFSFGELD 130
L++ V+ N+ K + G ++IPEF E D
Sbjct: 71 LSMNVKVT-NLDTNKDDEDDDGILADGKLEIPEFMHDESD 109
>sp|Q4A009|LYTS_STAS1 Sensor protein LytS OS=Staphylococcus saprophyticus subsp.
saprophyticus (strain ATCC 15305 / DSM 20229) GN=lytS
PE=3 SV=1
Length = 591
Score = 33.5 bits (75), Expect = 0.83, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 111 EKKMVKGHIDIPEFSFGELDDLQMQVRISEEKDLSKEDKLQISQDLKMFLQPVREKLLLF 170
E K ++ ++ P F F ++ + +RI EK ++E LQ+SQ + LQ R +
Sbjct: 379 EIKSLQAQVN-PHFFFNAINTISALIRIDSEK--ARELLLQLSQFFRSNLQGARNNTISL 435
Query: 171 EQELK 175
E+EL+
Sbjct: 436 EKELQ 440
>sp|Q5WL39|RHAAB_BACSK Bifunctional enzyme RhaA/RhaB OS=Bacillus clausii (strain KSM-K16)
GN=rhaAB PE=3 SV=1
Length = 894
Score = 31.2 bits (69), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 47/120 (39%), Gaps = 9/120 (7%)
Query: 61 SVEFSGGKAEITEVSN----CVGDAFLVTVRNKKRVGYNYELTLKVRGEWNIREEKKMVK 116
SV S G + + N C A N+ VG + G W I+E ++++
Sbjct: 252 SVYISSGTWSLIGIENRTPICSQQAMAANFTNEGGVGSRIRFLKNIMGLWMIQEVQRLLP 311
Query: 117 GHIDIPEFSFGELDDLQMQVRISEEKDLSKEDKLQISQDLKMFLQPVREKLLLFEQELKD 176
GH +SF +L + + E D+ + L+ ++ Q REK L + D
Sbjct: 312 GH-----WSFSQLAQAASESTYTGEIDVDQHRFLKPENMIEEIQQACREKGLAVPESPGD 366
>sp|Q98CN7|TRPB_RHILO Tryptophan synthase beta chain OS=Rhizobium loti (strain
MAFF303099) GN=trpB PE=3 SV=1
Length = 416
Score = 31.2 bits (69), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 14/86 (16%)
Query: 21 WNRL--DPTFRSECTVEAGTWEEKSLNKWASDRIKELLTSVGSVEFSGGKAEI------- 71
WN + DP FR+E T + + + + ++ + + L V S + GG A++
Sbjct: 43 WNEVKNDPDFRAELTDLSTHYAGRPSKLYFAEGLTKHLREVSSAKGLGGGAKVYFKREDL 102
Query: 72 -----TEVSNCVGDAFLVTVRNKKRV 92
+++NC+G L KKR+
Sbjct: 103 NHTGSHKINNCLGQILLAKRMGKKRI 128
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.133 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,491,467
Number of Sequences: 539616
Number of extensions: 2568481
Number of successful extensions: 5905
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 5892
Number of HSP's gapped (non-prelim): 29
length of query: 177
length of database: 191,569,459
effective HSP length: 110
effective length of query: 67
effective length of database: 132,211,699
effective search space: 8858183833
effective search space used: 8858183833
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 57 (26.6 bits)