Query 030450
Match_columns 177
No_of_seqs 131 out of 488
Neff 4.5
Searched_HMMs 46136
Date Fri Mar 29 13:55:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030450.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/030450hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF02681 DUF212: Divergent PAP 100.0 8.6E-60 1.9E-64 375.2 12.3 138 33-170 1-141 (141)
2 COG1963 Uncharacterized protei 100.0 1.9E-55 4.2E-60 351.4 10.5 145 31-175 5-149 (153)
3 cd03383 PAP2_diacylglycerolkin 99.7 1.7E-16 3.6E-21 121.2 10.1 96 36-175 11-107 (109)
4 cd03394 PAP2_like_5 PAP2_like_ 99.6 2.3E-15 4.9E-20 112.1 9.9 98 38-174 8-106 (106)
5 cd03388 PAP2_SPPase1 PAP2_like 99.6 1.7E-14 3.7E-19 113.5 10.3 101 39-173 39-150 (151)
6 cd03391 PAP2_containing_2_like 99.5 2.6E-14 5.7E-19 114.3 9.2 101 39-173 53-158 (159)
7 cd03382 PAP2_dolichyldiphospha 99.5 5.4E-14 1.2E-18 112.2 10.5 100 40-174 49-159 (159)
8 cd03385 PAP2_BcrC_like PAP2_li 99.5 6.3E-14 1.4E-18 109.2 10.3 101 39-175 39-144 (144)
9 PRK09597 lipid A 1-phosphatase 99.5 8E-14 1.7E-18 116.3 10.5 102 38-175 82-186 (190)
10 cd03393 PAP2_like_3 PAP2_like_ 99.5 2.2E-13 4.8E-18 103.9 10.2 101 38-173 18-124 (125)
11 cd03395 PAP2_like_4 PAP2_like_ 99.5 4.9E-13 1.1E-17 107.2 9.8 98 42-174 66-171 (177)
12 cd03392 PAP2_like_2 PAP2_like_ 99.4 5E-13 1.1E-17 106.9 9.7 101 39-174 68-176 (182)
13 PLN02525 phosphatidic acid pho 99.4 1E-12 2.3E-17 117.9 9.9 99 41-173 43-160 (352)
14 cd03384 PAP2_wunen PAP2, wunen 99.4 1.6E-12 3.5E-17 103.0 9.4 102 38-173 9-149 (150)
15 cd03390 PAP2_containing_1_like 99.4 1.5E-12 3.3E-17 106.0 8.8 103 39-175 52-191 (193)
16 cd03389 PAP2_lipid_A_1_phospha 99.4 3E-12 6.4E-17 104.4 10.5 99 40-175 76-184 (186)
17 KOG3146 Dolichyl pyrophosphate 99.4 1.8E-12 3.8E-17 110.1 8.9 71 70-174 91-173 (228)
18 PRK11837 undecaprenyl pyrophos 99.3 6.8E-12 1.5E-16 104.3 10.3 99 39-173 65-168 (202)
19 PF01569 PAP2: PAP2 superfamil 99.3 7E-12 1.5E-16 92.7 8.7 103 39-175 6-122 (129)
20 PRK10699 phosphatidylglyceroph 99.3 5.7E-12 1.2E-16 108.5 8.6 66 74-173 158-226 (244)
21 cd03381 PAP2_glucose_6_phospha 99.3 8.7E-12 1.9E-16 106.6 9.5 102 39-174 21-151 (235)
22 smart00014 acidPPc Acid phosph 99.3 2.8E-11 6.1E-16 90.0 9.4 99 41-173 3-115 (116)
23 cd01610 PAP2_like PAP2_like pr 99.3 4.2E-11 9.1E-16 86.4 9.6 100 40-173 10-121 (122)
24 cd03396 PAP2_like_6 PAP2_like_ 99.2 6.5E-11 1.4E-15 96.9 9.6 103 39-175 73-195 (197)
25 PLN02731 Putative lipid phosph 99.2 1.5E-10 3.2E-15 103.7 9.7 103 39-175 123-260 (333)
26 PLN02250 lipid phosphate phosp 99.2 1.3E-10 2.7E-15 103.3 9.1 103 39-175 104-242 (314)
27 COG0671 PgpB Membrane-associat 99.1 2E-10 4.4E-15 88.8 8.4 69 72-174 133-208 (232)
28 PLN02715 lipid phosphate phosp 99.1 3.1E-10 6.6E-15 101.4 9.0 103 39-175 129-266 (327)
29 cd03380 PAP2_like_1 PAP2_like_ 99.1 1.5E-09 3.2E-14 89.4 10.3 90 47-173 107-207 (209)
30 cd03397 PAP2_acid_phosphatase 98.9 6E-09 1.3E-13 88.2 9.8 91 49-176 117-217 (232)
31 cd03398 PAP2_haloperoxidase PA 98.7 8.9E-08 1.9E-12 80.6 9.7 93 47-173 100-230 (232)
32 KOG2822 Sphingoid base-phospha 98.7 3E-08 6.6E-13 90.4 6.5 100 41-174 119-233 (407)
33 cd03386 PAP2_Aur1_like PAP2_li 98.5 3E-07 6.6E-12 74.5 6.8 68 72-175 116-184 (186)
34 KOG3030 Lipid phosphate phosph 98.4 1.2E-06 2.6E-11 78.3 8.1 103 39-175 116-259 (317)
35 KOG4268 Uncharacterized conser 98.4 2.8E-06 6E-11 70.3 9.0 100 38-171 69-174 (189)
36 PF14378 PAP2_3: PAP2 superfam 97.1 0.0011 2.4E-08 53.6 5.9 62 74-170 127-189 (191)
37 PF14360 PAP2_C: PAP2 superfam 90.5 0.97 2.1E-05 32.2 5.7 18 153-170 52-69 (74)
38 COG4129 Predicted membrane pro 77.8 3.2 6.9E-05 37.6 4.2 65 74-173 10-74 (332)
39 COG4803 Predicted membrane pro 51.0 11 0.00023 31.4 1.9 32 145-176 48-79 (170)
40 TIGR00827 EIIC-GAT PTS system, 50.1 16 0.00035 34.3 3.1 47 127-173 184-231 (407)
41 PRK11660 putative transporter; 49.7 57 0.0012 31.1 6.8 46 41-86 288-344 (568)
42 PF14362 DUF4407: Domain of un 46.3 96 0.0021 26.8 7.2 35 80-114 25-63 (301)
43 TIGR00815 sulP high affinity s 41.9 61 0.0013 30.7 5.7 51 39-89 266-327 (563)
44 PF06081 DUF939: Bacterial pro 41.8 35 0.00075 26.7 3.4 34 79-114 9-42 (141)
45 PF10261 Scs3p: Inositol phosp 41.0 19 0.0004 30.8 1.9 21 154-174 218-238 (238)
46 PF01219 DAGK_prokar: Prokaryo 38.2 88 0.0019 23.7 5.0 44 82-137 23-66 (104)
47 COG0472 Rfe UDP-N-acetylmuramy 38.1 1.1E+02 0.0024 27.3 6.5 25 153-177 186-210 (319)
48 PF11522 Pik1: Yeast phosphati 35.7 45 0.00097 22.7 2.7 38 128-167 10-49 (51)
49 TIGR02005 PTS-IIBC-alpha PTS s 35.2 1.7E+02 0.0037 28.3 7.6 89 72-174 57-154 (524)
50 PF10066 DUF2304: Uncharacteri 34.6 50 0.0011 25.0 3.2 51 82-136 52-102 (115)
51 PF04632 FUSC: Fusaric acid re 33.1 1.1E+02 0.0024 28.8 5.8 33 80-114 8-40 (650)
52 PF00916 Sulfate_transp: Sulfa 31.2 1.5E+02 0.0033 24.7 5.9 25 72-96 198-222 (280)
53 COG5336 Uncharacterized protei 30.1 49 0.0011 26.1 2.5 19 155-173 48-66 (116)
54 COG4575 ElaB Uncharacterized c 28.5 46 0.00099 25.9 2.1 26 149-174 76-102 (104)
55 PF03611 EIIC-GAT: PTS system 26.4 58 0.0012 30.3 2.7 48 126-173 187-236 (415)
56 PF00953 Glycos_transf_4: Glyc 23.8 3.1E+02 0.0067 21.6 6.2 23 153-175 109-131 (159)
57 PF04632 FUSC: Fusaric acid re 23.6 2.3E+02 0.005 26.7 6.2 21 154-174 387-407 (650)
58 PRK14654 mraY phospho-N-acetyl 22.8 3.8E+02 0.0083 23.8 7.1 25 153-177 176-200 (302)
59 KOG4505 Na+/H+ antiporter [Ino 22.1 73 0.0016 30.1 2.5 18 156-173 209-226 (467)
60 TIGR02872 spore_ytvI sporulati 21.5 5E+02 0.011 22.0 7.6 39 36-84 20-58 (341)
61 COG3775 GatC Phosphotransferas 21.2 80 0.0017 30.1 2.6 45 128-172 195-240 (446)
62 PF01034 Syndecan: Syndecan do 20.5 33 0.00072 24.4 0.0 13 158-170 9-21 (64)
No 1
>PF02681 DUF212: Divergent PAP2 family; InterPro: IPR003832 This family is related to the acid phosphatase/vanadium-dependent haloperoxidases; members of this group are uncharacterised.
Probab=100.00 E-value=8.6e-60 Score=375.25 Aligned_cols=138 Identities=59% Similarity=0.911 Sum_probs=132.0
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccCCCCchhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHh
Q 030450 33 FPNNLPLISAFLAFALAQFLKIFTTWYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVM 112 (177)
Q Consensus 33 l~~N~~l~sal~a~~~AQ~iK~~i~~lr~~~~d~~~l~~sGGMPSSHSA~v~aLat~igl~~G~~s~~Faia~v~A~IVm 112 (177)
|++|++|++++++|++||++|++++++++|+|||++++++|||||||||+|+||||++|+++|++||+|++++++|+|||
T Consensus 1 l~~N~~l~~a~~a~~~AQ~iK~~~~~~~~r~~d~~~~~~sGGMPSSHSA~V~aLat~ig~~~G~~S~~FAia~v~a~IVm 80 (141)
T PF02681_consen 1 LLSNKVLIAALIAWFIAQFIKVFINYLKERKWDWRRFFSSGGMPSSHSATVSALATAIGLQEGFDSPLFAIAAVFALIVM 80 (141)
T ss_pred CcCChHHHHHHHHHHHHHHHHHHHHHHHhCcccHHHHhhcCCCCchHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHhhe
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccchhhhhhhhhHHHHHHhhcCCCCC---CCCCCCCccccCCCChhHHHHHHHHHHHHH
Q 030450 113 YDASGVRLHAGRQAELLNQIVCEFPPDH---PLSSVRPLRELLGHTPLQVVAGGILGCVVA 170 (177)
Q Consensus 113 yDA~GVRr~aG~qA~~lN~L~~~~~~~~---~~~~~~~lre~lGHtp~EVl~GallGivia 170 (177)
|||+||||++||||++||+|++++++.+ +..++++|||++||||.||++|+++|+++|
T Consensus 81 yDA~GVRr~aG~qA~~lN~l~~~~~~~~~~~~~~~~~~LKE~lGHtp~EV~~G~llGi~vA 141 (141)
T PF02681_consen 81 YDAMGVRRAAGKQAKVLNQLIEELEEEHQSEPPIQEKKLKELLGHTPLEVFAGALLGIVVA 141 (141)
T ss_pred eehHHHHHHHHHHHHHHHHHHHHHHhhhccccchhhhcccccCCCCHHHHHHHHHHHHhhC
Confidence 9999999999999999999999998665 344567999999999999999999999985
No 2
>COG1963 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=100.00 E-value=1.9e-55 Score=351.40 Aligned_cols=145 Identities=46% Similarity=0.701 Sum_probs=137.7
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccCCCCchhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Q 030450 31 LFFPNNLPLISAFLAFALAQFLKIFTTWYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACI 110 (177)
Q Consensus 31 ~~l~~N~~l~sal~a~~~AQ~iK~~i~~lr~~~~d~~~l~~sGGMPSSHSA~v~aLat~igl~~G~~s~~Faia~v~A~I 110 (177)
-.+|.|.+|++++++|+.||++|.+++.+|+||+||+.++++|||||||||+|+||+|.+++++|+|||+|+++++||+|
T Consensus 5 ~~if~n~~llsal~a~~~AQvIKv~I~~~~~rk~~~~~~~sTGGMPSsHSA~VtALat~ial~~G~dS~lFaiA~vfaiI 84 (153)
T COG1963 5 MEIFTNTPLLSALVAILLAQVIKVLIELIRTRKLNVTLLFSTGGMPSSHSALVTALATSIALTEGLDSPLFAIAAVFAII 84 (153)
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeecCCCCchHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccchhhhhhhhhHHHHHHhhcCCCCCCCCCCCCccccCCCChhHHHHHHHHHHHHHHhhcc
Q 030450 111 VMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVAFLMRN 175 (177)
Q Consensus 111 VmyDA~GVRr~aG~qA~~lN~L~~~~~~~~~~~~~~~lre~lGHtp~EVl~GallGivia~i~~~ 175 (177)
|||||.||||++|+||++||+|++++.++.+..++++|||.+||||.||++|.++||++++++|-
T Consensus 85 vm~DA~GVRr~aG~QA~iLN~l~~~~~~e~~~~~~~~lKellGH~p~eV~~G~~lGI~i~~i~~~ 149 (153)
T COG1963 85 VMYDATGVRRSAGVQARILNQLIEELVNEKKDFDKKRLKELLGHTPLEVFAGLLLGILIAWIFYA 149 (153)
T ss_pred HhhhhhhHHHhccchHHHHHHHHHHHHHhhccCCHHHHHHHhCCChHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999766655556679999999999999999999999998763
No 3
>cd03383 PAP2_diacylglycerolkinase PAP2_like proteins, diacylglycerol_kinase like sub-family. In some prokaryotes, PAP2_like phosphatase domains appear fused to E. coli DAGK-like trans-membrane diacylglycerol kinase domains. The cellular function of these architectures remains to be determined.
Probab=99.69 E-value=1.7e-16 Score=121.15 Aligned_cols=96 Identities=29% Similarity=0.442 Sum_probs=79.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccCCCCchhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHhhcc
Q 030450 36 NLPLISAFLAFALAQFLKIFTTWYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDA 115 (177)
Q Consensus 36 N~~l~sal~a~~~AQ~iK~~i~~lr~~~~d~~~l~~sGGMPSSHSA~v~aLat~igl~~G~~s~~Faia~v~A~IVmyDA 115 (177)
|..+.+-+++.++.+++|.+++|-||.. +||||+||++.+++++.+.+... +..+..++++++++|+++
T Consensus 11 ~~~~~~~~~~~~i~~~lK~~~~r~RP~~---------~sFPSgHt~~a~a~a~~l~~~~~-~~~~~~~~~~~a~lv~~S- 79 (109)
T cd03383 11 HVTFVSLLIVIIVVVILKAYFGRGTPLE---------GGMPSGHAAIAFSIATAISLITN-NPIISILSVLLAVMVAHS- 79 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCC---------CCCChHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHH-
Confidence 3446777788899999999998888752 58999999999999998887542 223445677899999999
Q ss_pred cchhhhhhhhhHHHHHHhhcCCCCCCCCCCCCccccCC-CChhHHHHHHHHHHHHHHhhcc
Q 030450 116 SGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMRN 175 (177)
Q Consensus 116 ~GVRr~aG~qA~~lN~L~~~~~~~~~~~~~~~lre~lG-Htp~EVl~GallGivia~i~~~ 175 (177)
|.|+| |+|.||++|+++|+++++++|+
T Consensus 80 ---------------------------------Rvylg~H~psDVlaG~~lG~~~~~~~~~ 107 (109)
T cd03383 80 ---------------------------------RVEMKIHTMWEVVVGAILGALITLLIFK 107 (109)
T ss_pred ---------------------------------HHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999 9999999999999999988764
No 4
>cd03394 PAP2_like_5 PAP2_like_5 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.63 E-value=2.3e-15 Score=112.07 Aligned_cols=98 Identities=24% Similarity=0.186 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccccccccccCCCCchhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHhhcccc
Q 030450 38 PLISAFLAFALAQFLKIFTTWYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASG 117 (177)
Q Consensus 38 ~l~sal~a~~~AQ~iK~~i~~lr~~~~d~~~l~~sGGMPSSHSA~v~aLat~igl~~G~~s~~Faia~v~A~IVmyDA~G 117 (177)
.+.+.+++..+.+++|..++|-||...+ -...+|||+|++..+++++.+....+.. ......++++.+|+++
T Consensus 8 ~~~~~~~~~~~~~~lK~~~~r~RP~~~~----~~~~sfPSgHa~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~s--- 79 (106)
T cd03394 8 LAEAAALTAAVTEGLKFAVGRARPDGSN----NGYRSFPSGHTASAFAAATFLQYRYGWR-WYGIPAYALASLVGAS--- 79 (106)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCC----CCCCccCcHHHHHHHHHHHHHHHHHcch-HHHHHHHHHHHHHHHH---
Confidence 4566778888899999999988877544 3355999999999999999988776642 2334457788899998
Q ss_pred hhhhhhhhhHHHHHHhhcCCCCCCCCCCCCccccCC-CChhHHHHHHHHHHHHHHhhc
Q 030450 118 VRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMR 174 (177)
Q Consensus 118 VRr~aG~qA~~lN~L~~~~~~~~~~~~~~~lre~lG-Htp~EVl~GallGivia~i~~ 174 (177)
|.|+| |+|.||++|.++|.++++++|
T Consensus 80 -------------------------------Rv~~g~H~~sDV~~G~~lG~~~~~~~~ 106 (106)
T cd03394 80 -------------------------------RVVANRHWLSDVLAGAAIGILVGYLVT 106 (106)
T ss_pred -------------------------------HHhcCCcCHHHHHHHHHHHHHheeeeC
Confidence 89999 999999999999999998764
No 5
>cd03388 PAP2_SPPase1 PAP2_like proteins, sphingosine-1-phosphatase subfamily. Sphingosine-1-phosphatase is an intracellular enzyme located in the endoplasmic reticulum, which regulates the level of sphingosine-1-phosphate (S1P), a bioactive lipid. S1P acts as a second messenger in the cell, and extracellularly by binding to G-protein coupled receptors of the endothelial differentiation gene family.
Probab=99.57 E-value=1.7e-14 Score=113.53 Aligned_cols=101 Identities=19% Similarity=0.337 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccccccc-cc---ccC-CCCchhHHHHHHHHHHHHHHhCCC--c---hHHHHHHHHH
Q 030450 39 LISAFLAFALAQFLKIFTTWYKEKRWDSKK-ML---DSG-GMPSSHSATVSALAVAIGLQEGSG--S---PSFAIAVVLA 108 (177)
Q Consensus 39 l~sal~a~~~AQ~iK~~i~~lr~~~~d~~~-l~---~sG-GMPSSHSA~v~aLat~igl~~G~~--s---~~Faia~v~A 108 (177)
+.+...+..+.+++|..++|-||....... .. .++ ||||+|+++.+++++.+.+....+ . ....++++++
T Consensus 39 ~~~~~~~~~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~~SFPSgH~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 118 (151)
T cd03388 39 VVVLALGMYIGQFIKDLFCLPRPSSPPVVRLTMSSAALEYGFPSTHAMNATAISFYLLIYLYDRYQYPFVLGLILALFYS 118 (151)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCCchhhhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHH
Confidence 445556777889999999998877522111 11 233 999999999999999888753221 1 1234567789
Q ss_pred HHHhhcccchhhhhhhhhHHHHHHhhcCCCCCCCCCCCCccccCC-CChhHHHHHHHHHHHHHHhh
Q 030450 109 CIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLM 173 (177)
Q Consensus 109 ~IVmyDA~GVRr~aG~qA~~lN~L~~~~~~~~~~~~~~~lre~lG-Htp~EVl~GallGivia~i~ 173 (177)
++|.++ |.|+| |+|.||++|+++|++++.++
T Consensus 119 ~~v~~S----------------------------------RvylgvH~p~DVl~G~~lG~~~~~~~ 150 (151)
T cd03388 119 TLVCLS----------------------------------RIYMGMHSVLDVIAGSLIGVLILLFR 150 (151)
T ss_pred HHHHHH----------------------------------HHHhCCCCHHHHHHHHHHHHHHHHHc
Confidence 999999 99999 99999999999999998764
No 6
>cd03391 PAP2_containing_2_like PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_2. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to eukaryota, lacks functional characterization and may act as a membrane-associated phosphatidic acid phosphatase.
Probab=99.54 E-value=2.6e-14 Score=114.32 Aligned_cols=101 Identities=25% Similarity=0.305 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccccccc--ccc--cCCCCchhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHhhc
Q 030450 39 LISAFLAFALAQFLKIFTTWYKEKRWDSKK--MLD--SGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYD 114 (177)
Q Consensus 39 l~sal~a~~~AQ~iK~~i~~lr~~~~d~~~--l~~--sGGMPSSHSA~v~aLat~igl~~G~~s~~Faia~v~A~IVmyD 114 (177)
+.+.+++.++.+++|..+.|.||...+... ..+ .-+|||+|+++.+++++.+.+..+.+..+..+.+.++++|+++
T Consensus 53 ~~~~~~~~~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~SFPSGHa~~a~a~a~~l~~~~~~~~~~~~~~~~~a~~v~~S 132 (159)
T cd03391 53 LLGLLLDIITVAILKALVRRRRPAYNSPDMLDYVAVDKYSFPSGHASRAAFVARFLLNHLVLAVPLRVLLVLWATVVGIS 132 (159)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCCCCccchhccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445666788999999998877543221 122 3399999999999999998877654334555677899999999
Q ss_pred ccchhhhhhhhhHHHHHHhhcCCCCCCCCCCCCccccCC-CChhHHHHHHHHHHHHHHhh
Q 030450 115 ASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLM 173 (177)
Q Consensus 115 A~GVRr~aG~qA~~lN~L~~~~~~~~~~~~~~~lre~lG-Htp~EVl~GallGivia~i~ 173 (177)
|.|+| |+|.||++|+++|+++++++
T Consensus 133 ----------------------------------Rvylg~H~psDVlaG~~lG~~~~~~~ 158 (159)
T cd03391 133 ----------------------------------RVLLGRHHVLDVLAGAFLGYLEALLV 158 (159)
T ss_pred ----------------------------------HHHhCCcCHHHHHHHHHHHHHHHHhC
Confidence 99999 99999999999999998864
No 7
>cd03382 PAP2_dolichyldiphosphatase PAP2_like proteins, dolichyldiphosphatase subfamily. Dolichyldiphosphatase is a membrane-associated protein located in the endoplasmic reticulum and hydrolyzes dolichyl pyrophosphate, as well as dolichylmonophosphate at a low rate. The enzyme is necessary for maintaining proper levels of dolichol-linked oligosaccharides and protein N-glycosylation, and might play a role in re-utilization of the glycosyl carrier lipid for additional rounds of lipid intermediate biosynthesis after its release during protein N-glycosylation reactions.
Probab=99.54 E-value=5.4e-14 Score=112.19 Aligned_cols=100 Identities=32% Similarity=0.271 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccccccccccccCCCCchhHHHHHHHHHHHHHH--hCCCc--------hHHHHHHHHHH
Q 030450 40 ISAFLAFALAQFLKIFTTWYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQ--EGSGS--------PSFAIAVVLAC 109 (177)
Q Consensus 40 ~sal~a~~~AQ~iK~~i~~lr~~~~d~~~l~~sGGMPSSHSA~v~aLat~igl~--~G~~s--------~~Faia~v~A~ 109 (177)
.+.+.+.++.+++|.++++-||...+.. --...||||+|++..+++++.+.+. ...+. ....+..++++
T Consensus 49 ~~~~~~~~~~~~lK~~~~rpRP~~~~~~-~~~~~SFPSgHa~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (159)
T cd03382 49 IGLLANEALNYVLKRIIKEPRPCSGAYF-VRSGYGMPSSHSQFMGFFAVYLLLFIYLRLGRLNSLVSRFLLSLGLLLLAL 127 (159)
T ss_pred HHHHHHHHHHHHHHHHhCCCCcCCCCcC-CCCCCCCCchhHHHHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHHHH
Confidence 3444566777889999988776543221 1234499999999988887777653 22222 12234567899
Q ss_pred HHhhcccchhhhhhhhhHHHHHHhhcCCCCCCCCCCCCccccCC-CChhHHHHHHHHHHHHHHhhc
Q 030450 110 IVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMR 174 (177)
Q Consensus 110 IVmyDA~GVRr~aG~qA~~lN~L~~~~~~~~~~~~~~~lre~lG-Htp~EVl~GallGivia~i~~ 174 (177)
+|+++ |.|+| |+|.||++|.++|++++++++
T Consensus 128 ~v~~S----------------------------------Rvylg~H~~~DVl~G~~lG~~~~~~~~ 159 (159)
T cd03382 128 LVSYS----------------------------------RVYLGYHTVSQVVVGAIVGILLGILWF 159 (159)
T ss_pred HHHHH----------------------------------HHHHccCCHHHHHHHHHHHHHHHHhcC
Confidence 99998 99999 999999999999999998864
No 8
>cd03385 PAP2_BcrC_like PAP2_like proteins, BcrC_like subfamily. Several members of this family have been annotated as bacitracin transport permeases, as it was suspected that they form the permease component of an ABC transporter system. It was shown, however, that BcrC from Bacillus subtilis posesses undecaprenyl pyrophosphate (UPP) phospatase activity, and it is hypothesized that it competes with bacitracin for UPP, increasing the cell's resistance to bacitracin.
Probab=99.53 E-value=6.3e-14 Score=109.20 Aligned_cols=101 Identities=20% Similarity=0.308 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccccc-cccc---ccCCCCchhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHhhc
Q 030450 39 LISAFLAFALAQFLKIFTTWYKEKRWDS-KKML---DSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYD 114 (177)
Q Consensus 39 l~sal~a~~~AQ~iK~~i~~lr~~~~d~-~~l~---~sGGMPSSHSA~v~aLat~igl~~G~~s~~Faia~v~A~IVmyD 114 (177)
+.+.+++..+.+++|..++|-||...+. .... ..-+|||+|+++.+++++.+.+... .....+.++++++|+++
T Consensus 39 ~~~~~~~~~i~~~lk~~~~r~RP~~~~~~~~~~~~~~~~SFPSgH~~~~~~~~~~l~~~~~--~~~~~~~~~~a~~v~~S 116 (144)
T cd03385 39 TIAVAVALLINYIIGLLYFHPRPFVVGLGHNLLPHAADSSFPSDHTTLFFSIAFSLLLRRR--KWAGWILLILALLVAWS 116 (144)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCccccccccccCCCCCCCCcHHHHHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHHH
Confidence 4445567777788898888777653221 1121 2349999999999998887655332 12344578899999999
Q ss_pred ccchhhhhhhhhHHHHHHhhcCCCCCCCCCCCCccccCC-CChhHHHHHHHHHHHHHHhhcc
Q 030450 115 ASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMRN 175 (177)
Q Consensus 115 A~GVRr~aG~qA~~lN~L~~~~~~~~~~~~~~~lre~lG-Htp~EVl~GallGivia~i~~~ 175 (177)
|.|+| |+|.||++|+++|++++++.|+
T Consensus 117 ----------------------------------Rvylg~H~~sDVl~G~~lg~~~~~~~~~ 144 (144)
T cd03385 117 ----------------------------------RIYLGVHYPLDMLGAALVAVLSALLVFQ 144 (144)
T ss_pred ----------------------------------HHHhCCccHHHHHHHHHHHHHHHHHHhC
Confidence 99999 9999999999999999998874
No 9
>PRK09597 lipid A 1-phosphatase; Reviewed
Probab=99.52 E-value=8e-14 Score=116.26 Aligned_cols=102 Identities=19% Similarity=0.086 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccccc-ccc-ccCCCCchhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHhhcc
Q 030450 38 PLISAFLAFALAQFLKIFTTWYKEKRWDSK-KML-DSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDA 115 (177)
Q Consensus 38 ~l~sal~a~~~AQ~iK~~i~~lr~~~~d~~-~l~-~sGGMPSSHSA~v~aLat~igl~~G~~s~~Faia~v~A~IVmyDA 115 (177)
.+.+.+.+..+.+++|..++|.+....++. +.- .+-||||+||+++++.++.+...++... ..+.+.++++|+|+
T Consensus 82 l~~al~~~~ll~~~LK~~~~R~~~~~~r~~~~p~~~~~SFPSGHt~~af~~a~~l~~~~~~~~--~~~~l~lallVg~S- 158 (190)
T PRK09597 82 VANASIATTLLTHTTKRALNHVTINDQRLGERPYGGNFNMPSGHSSMVGLAVAFLMRRYSFKK--YWWLLPLIPLTMLA- 158 (190)
T ss_pred HHHHHHHHHHHHHHHHHHhccccccccccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHchhH--HHHHHHHHHHHHHH-
Confidence 455677777888999999998654322221 111 2359999999999988877666555433 33345678899998
Q ss_pred cchhhhhhhhhHHHHHHhhcCCCCCCCCCCCCccccCC-CChhHHHHHHHHHHHHHHhhcc
Q 030450 116 SGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMRN 175 (177)
Q Consensus 116 ~GVRr~aG~qA~~lN~L~~~~~~~~~~~~~~~lre~lG-Htp~EVl~GallGivia~i~~~ 175 (177)
|.|+| |+|.||++|+++|+++++++++
T Consensus 159 ---------------------------------RVYLGvHyPsDVLaG~liGil~~~lf~~ 186 (190)
T PRK09597 159 ---------------------------------RIYLDMHTIGAVLAGLGVGMLCVSLFTS 186 (190)
T ss_pred ---------------------------------HHHhCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 99999 9999999999999999998764
No 10
>cd03393 PAP2_like_3 PAP2_like_3 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria and archaea, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.49 E-value=2.2e-13 Score=103.87 Aligned_cols=101 Identities=24% Similarity=0.257 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccccc-ccc----ccCCCCchhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHh
Q 030450 38 PLISAFLAFALAQFLKIFTTWYKEKRWDSK-KML----DSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVM 112 (177)
Q Consensus 38 ~l~sal~a~~~AQ~iK~~i~~lr~~~~d~~-~l~----~sGGMPSSHSA~v~aLat~igl~~G~~s~~Faia~v~A~IVm 112 (177)
.+.+.+++..+.+++|..++|-||...+.. .+. .+.||||+|+++.+++++.+..... ......+..+++..|+
T Consensus 18 ~~~~~~~~~~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~~sFPSgHa~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~ 96 (125)
T cd03393 18 LGLALCASGYLNAALKEVFKIPRPFTYDGIQAIYEESAGGYGFPSGHAQTSATFWGSLMLHVR-KKWFTLIGVVLVVLIS 96 (125)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCcCCCcccchhccCCCCCCCCCcHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 566777888889999999988887643321 111 2349999999999888777765543 1222345566788999
Q ss_pred hcccchhhhhhhhhHHHHHHhhcCCCCCCCCCCCCccccCC-CChhHHHHHHHHHHHHHHhh
Q 030450 113 YDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLM 173 (177)
Q Consensus 113 yDA~GVRr~aG~qA~~lN~L~~~~~~~~~~~~~~~lre~lG-Htp~EVl~GallGivia~i~ 173 (177)
++ |.|+| |+|.||++|+++|+++++++
T Consensus 97 ~s----------------------------------Rv~lg~H~~sDVl~G~~lG~~~~~~~ 124 (125)
T cd03393 97 FS----------------------------------RLYLGVHWPSDVIGGVLIGLLVLVLG 124 (125)
T ss_pred HH----------------------------------HHHhcccCHHHHHHHHHHHHHHHHHh
Confidence 98 99999 99999999999999999875
No 11
>cd03395 PAP2_like_4 PAP2_like_4 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.45 E-value=4.9e-13 Score=107.24 Aligned_cols=98 Identities=28% Similarity=0.338 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHHHHHhhhcccc-cccc---cc--cc-CCCCchhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHhhc
Q 030450 42 AFLAFALAQFLKIFTTWYKEKRW-DSKK---ML--DS-GGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYD 114 (177)
Q Consensus 42 al~a~~~AQ~iK~~i~~lr~~~~-d~~~---l~--~s-GGMPSSHSA~v~aLat~igl~~G~~s~~Faia~v~A~IVmyD 114 (177)
.+.+..+.+.+|..++|-||... +..+ .. .. -+|||.||+..+++++.+.+..... ....+.+++++.|+++
T Consensus 66 ~~~~~~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~~~~SFPSgHt~~a~~~~~~l~~~~~~~-~~~~~~~~~~~~v~~S 144 (177)
T cd03395 66 GFADQLASGFLKPLVARLRPCNALDGVRLVVLGDQGGSYSFASSHAANSFALALFIWLFFRRG-LFSPVLLLWALLVGYS 144 (177)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCccccccccccCCCCCCCCChHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 34456777899999998887642 1111 12 12 2999999999999999988754321 2445678899999999
Q ss_pred ccchhhhhhhhhHHHHHHhhcCCCCCCCCCCCCccccCC-CChhHHHHHHHHHHHHHHhhc
Q 030450 115 ASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMR 174 (177)
Q Consensus 115 A~GVRr~aG~qA~~lN~L~~~~~~~~~~~~~~~lre~lG-Htp~EVl~GallGivia~i~~ 174 (177)
|.|+| |+|.||++|+++|+.++.+.+
T Consensus 145 ----------------------------------RvylG~H~psDVl~G~~lG~~~~~~~~ 171 (177)
T cd03395 145 ----------------------------------RVYVGVHYPGDVIAGALIGIISGLLFY 171 (177)
T ss_pred ----------------------------------HHHhCCcCHHHHHHHHHHHHHHHHHHH
Confidence 99999 999999999999999987643
No 12
>cd03392 PAP2_like_2 PAP2_like_2 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.45 E-value=5e-13 Score=106.88 Aligned_cols=101 Identities=23% Similarity=0.200 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccccccccccccCCCCchhHHHHHHHHHHHHHHh--CCCc-----hHHHHHHHHHHHH
Q 030450 39 LISAFLAFALAQFLKIFTTWYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQE--GSGS-----PSFAIAVVLACIV 111 (177)
Q Consensus 39 l~sal~a~~~AQ~iK~~i~~lr~~~~d~~~l~~sGGMPSSHSA~v~aLat~igl~~--G~~s-----~~Faia~v~A~IV 111 (177)
+.+.+.+..+.+++|..++|-||...+.. --...+|||+|+++.++++..+.+.. .... ....+++++++.|
T Consensus 68 ~~~~~~~~~~~~~lK~~~~r~RP~~~~~~-~~~~~sfPSgHa~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v 146 (182)
T cd03392 68 LLALLGGGALNTLLKLLVQRPRPPLHLLV-PEGGYSFPSGHAMGATVLYGFLAYLLARRLPRRRVRILLLILAAILILLV 146 (182)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCcccC-CCCCCCCCcHHHHHHHHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHHHH
Confidence 34456677888999999998887754321 11234999999999999987776532 2221 2334567889999
Q ss_pred hhcccchhhhhhhhhHHHHHHhhcCCCCCCCCCCCCccccCC-CChhHHHHHHHHHHHHHHhhc
Q 030450 112 MYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMR 174 (177)
Q Consensus 112 myDA~GVRr~aG~qA~~lN~L~~~~~~~~~~~~~~~lre~lG-Htp~EVl~GallGivia~i~~ 174 (177)
+++ |.|+| |+|.||++|.++|++++.+.+
T Consensus 147 ~~s----------------------------------Rv~lg~H~~sDvl~G~~lG~~~~~~~~ 176 (182)
T cd03392 147 GLS----------------------------------RLYLGVHYPSDVLAGWLLGLAWLALLI 176 (182)
T ss_pred HHH----------------------------------HHHhcccchhHHHHHHHHHHHHHHHHH
Confidence 998 99999 999999999999999887643
No 13
>PLN02525 phosphatidic acid phosphatase family protein
Probab=99.41 E-value=1e-12 Score=117.93 Aligned_cols=99 Identities=19% Similarity=0.239 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccccccc--------cccC-CCCchhHHHHHHHHHHHHHHh-C-C--Cch---H--HH
Q 030450 41 SAFLAFALAQFLKIFTTWYKEKRWDSKKM--------LDSG-GMPSSHSATVSALAVAIGLQE-G-S--GSP---S--FA 102 (177)
Q Consensus 41 sal~a~~~AQ~iK~~i~~lr~~~~d~~~l--------~~sG-GMPSSHSA~v~aLat~igl~~-G-~--~s~---~--Fa 102 (177)
....+..++|.+|..+.+-||......++ ...+ ||||+||++.++++..+.... . . .++ . ..
T Consensus 43 ll~~~~~l~~~lKd~v~rPRP~~pp~~ri~~~~~~~~~a~eYsFPSgHt~nA~av~~~ll~~l~~~~~~~~~~~~~~~~~ 122 (352)
T PLN02525 43 LMAFCDYVGNCIKDVVSAPRPSCPPVRRVTATKDEEENAMEYGLPSSHTLNTVCLSGYLLHYVLSYLQNVDASVIFAGLA 122 (352)
T ss_pred HHHHHHHHHHHHHHhhcCCCcCCcchhhhhcccccccCCCCCCCChHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHH
Confidence 34455677899999999988775333322 1123 999999999999998776542 1 1 111 1 24
Q ss_pred HHHHHHHHHhhcccchhhhhhhhhHHHHHHhhcCCCCCCCCCCCCccccCC-CChhHHHHHHHHHHHHHHhh
Q 030450 103 IAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLM 173 (177)
Q Consensus 103 ia~v~A~IVmyDA~GVRr~aG~qA~~lN~L~~~~~~~~~~~~~~~lre~lG-Htp~EVl~GallGivia~i~ 173 (177)
++++++++|+++ |.|+| |+|.||++|+++|++++.++
T Consensus 123 l~~l~allV~~S----------------------------------RlYLGvH~psDVl~G~~lG~~i~~~~ 160 (352)
T PLN02525 123 LFCLLVALVGFG----------------------------------RLYLGMHSPIDIIAGLAIGLVILAFW 160 (352)
T ss_pred HHHHHHHHHHHH----------------------------------HHheeccCHHHHHHHHHHHHHHHHHH
Confidence 567789999999 99999 99999999999999998765
No 14
>cd03384 PAP2_wunen PAP2, wunen subfamily. Most likely a family of membrane associated phosphatidic acid phosphatases. Wunen is a drosophila protein expressed in the central nervous system, which provides repellent activity towards primordial germ cells (PGCs), controls the survival of PGCs and is essential in the migration process of these cells towards the somatic gonadal precursors.
Probab=99.40 E-value=1.6e-12 Score=102.99 Aligned_cols=102 Identities=25% Similarity=0.227 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccc-----ccccc---------------------c-cccC-CCCchhHHHHHHHHHH
Q 030450 38 PLISAFLAFALAQFLKIFTTWYKEKR-----WDSKK---------------------M-LDSG-GMPSSHSATVSALAVA 89 (177)
Q Consensus 38 ~l~sal~a~~~AQ~iK~~i~~lr~~~-----~d~~~---------------------l-~~sG-GMPSSHSA~v~aLat~ 89 (177)
.+++..++.++.+++|..+.+.||.- +|... . -+.+ +|||+||++.++.+++
T Consensus 9 ~~~~~~~~~l~~~~lK~~igrpRP~fl~~c~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SFPSGHs~~a~~~~~~ 88 (150)
T cd03384 9 FLFGLFATQLLTDLGKYVTGRLRPHFLDVCKPNYTDLTCSLDHQYIADCTCCTGDPDLIREARLSFPSGHASLSMYAAVF 88 (150)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCChHhhcCCCCCCcccccCccccccceeeCCCHHHHhcCccCCCcHhHHHHHHHHHH
Confidence 35667778888999999999988742 33221 1 2223 9999999999988888
Q ss_pred HHHHh--CCC---c----h-HHHHHHHHHHHHhhcccchhhhhhhhhHHHHHHhhcCCCCCCCCCCCCccccCC-CChhH
Q 030450 90 IGLQE--GSG---S----P-SFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQ 158 (177)
Q Consensus 90 igl~~--G~~---s----~-~Faia~v~A~IVmyDA~GVRr~aG~qA~~lN~L~~~~~~~~~~~~~~~lre~lG-Htp~E 158 (177)
+.+.. ... . + ...+.+++++.|+++ |.++| |+|.|
T Consensus 89 l~l~l~~~~~~~~~~~~~~~~~~~~~~~a~~v~~s----------------------------------Rv~~~~H~~sD 134 (150)
T cd03384 89 LALYLQARLKLRGSRLLRPLLQFLLLALALYVGLS----------------------------------RISDYKHHWSD 134 (150)
T ss_pred HHHHHHHHhccccchHHHHHHHHHHHHHHHHHhHh----------------------------------hhccCCCCHHH
Confidence 77642 111 1 1 223457789999998 89999 99999
Q ss_pred HHHHHHHHHHHHHhh
Q 030450 159 VVAGGILGCVVAFLM 173 (177)
Q Consensus 159 Vl~GallGivia~i~ 173 (177)
|++|+++|++++++.
T Consensus 135 viaG~~lG~~~~~~~ 149 (150)
T cd03384 135 VLAGALLGSVIALFL 149 (150)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999764
No 15
>cd03390 PAP2_containing_1_like PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_1. Most likely membrane-associated phosphatidic acid phosphatases. Plant members of this group are constitutively expressed in many tissues and exhibit both diacylglycerol pyrophosphate phosphatase activity as well as phosphatidate (PA) phosphatase activity, they may have a more generic housekeeping role in lipid metabolism.
Probab=99.39 E-value=1.5e-12 Score=106.05 Aligned_cols=103 Identities=23% Similarity=0.227 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccc-----ccc-----------------ccccc--CCCCchhHHHHHHHHHHHHHHh
Q 030450 39 LISAFLAFALAQFLKIFTTWYKEKRW-----DSK-----------------KMLDS--GGMPSSHSATVSALAVAIGLQE 94 (177)
Q Consensus 39 l~sal~a~~~AQ~iK~~i~~lr~~~~-----d~~-----------------~l~~s--GGMPSSHSA~v~aLat~igl~~ 94 (177)
+++..++.++.+++|..+.|.||... +.. ..... -+|||+||++.++.++.+++..
T Consensus 52 ~~~~~~~~~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SFPSGHas~a~~~~~~l~l~l 131 (193)
T cd03390 52 LLSVSLNGVITNVLKNYAGRPRPDFLARCFPDGGTPSDTLVGIDICCTGDPGVLKEGRKSFPSGHSSFAFAGLGFLSLYL 131 (193)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCcHHHHhCCCCCcccccccCCCeecCCCHHHHHHhhcCCCCccHHHHHHHHHHHHHHH
Confidence 45556677889999999999987532 211 00122 3899999999999998888642
Q ss_pred --CCC----------chHHHHHHHHHHHHhhcccchhhhhhhhhHHHHHHhhcCCCCCCCCCCCCccccCC-CChhHHHH
Q 030450 95 --GSG----------SPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVA 161 (177)
Q Consensus 95 --G~~----------s~~Faia~v~A~IVmyDA~GVRr~aG~qA~~lN~L~~~~~~~~~~~~~~~lre~lG-Htp~EVl~ 161 (177)
... .....+.+++++.|.++ |.++| |+|.||++
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~S----------------------------------Ri~~g~H~~sDVla 177 (193)
T cd03390 132 AGKLHIFDPRGSSWRLLLALLPLLLAILVAVS----------------------------------RTRDYRHHFSDVIA 177 (193)
T ss_pred HHHhhcccccchHHHHHHHHHHHHHHHHHHHH----------------------------------HHhccccCHHHHHH
Confidence 111 11123457789999998 99999 99999999
Q ss_pred HHHHHHHHHHhhcc
Q 030450 162 GGILGCVVAFLMRN 175 (177)
Q Consensus 162 GallGivia~i~~~ 175 (177)
|+++|++++++.|+
T Consensus 178 G~~lG~~~a~~~~~ 191 (193)
T cd03390 178 GSLIGLIIAYLSYR 191 (193)
T ss_pred HHHHHHHHHHheeE
Confidence 99999999998875
No 16
>cd03389 PAP2_lipid_A_1_phosphatase PAP2_like proteins, Lipid A 1-phosphatase subfamily. Lipid A 1-phosphatase, or LpxE from Francisella novicida selectively dephosphorylates lipid A at the 1-position. Lipid A is the membrane-anchor component of lipopolysaccharides (LPS), the major constituents of the outer membrane in many gram-negative bacteria.
Probab=99.39 E-value=3e-12 Score=104.39 Aligned_cols=99 Identities=28% Similarity=0.361 Sum_probs=75.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccccccc------c---cccCCCCchhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Q 030450 40 ISAFLAFALAQFLKIFTTWYKEKRWDSKK------M---LDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACI 110 (177)
Q Consensus 40 ~sal~a~~~AQ~iK~~i~~lr~~~~d~~~------l---~~sGGMPSSHSA~v~aLat~igl~~G~~s~~Faia~v~A~I 110 (177)
.+.+.+..+.+.+|..++|-||...+... . -...+|||+|++..+++++.+.+.... .-....+++.+
T Consensus 76 ~~~~~~~~i~~~lK~~~~R~RP~~~~~~~~~~~~~~~~~~~~~SFPSGHa~~a~~~~~~l~~~~~~---~~~~~~~~~~l 152 (186)
T cd03389 76 ATVALSGILVNLLKFIIGRARPKLLFDDGLYGFDPFHADYAFTSFPSGHSATAGAAAAALALLFPR---YRWAFILLALL 152 (186)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCChhhcCCcccccccccCCCCCCcCcHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
Confidence 34455667778999999988876422110 0 112399999999999999999876532 22344678889
Q ss_pred HhhcccchhhhhhhhhHHHHHHhhcCCCCCCCCCCCCccccCC-CChhHHHHHHHHHHHHHHhhcc
Q 030450 111 VMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMRN 175 (177)
Q Consensus 111 VmyDA~GVRr~aG~qA~~lN~L~~~~~~~~~~~~~~~lre~lG-Htp~EVl~GallGivia~i~~~ 175 (177)
|+++ |.|+| |+|.||++|+++|++++.+.|.
T Consensus 153 v~~S----------------------------------Riylg~H~~sDVl~G~~lG~~~~~~~~~ 184 (186)
T cd03389 153 IAFS----------------------------------RVIVGAHYPSDVIAGSLLGAVTALALYQ 184 (186)
T ss_pred HHHH----------------------------------HHHcCCcCHHHHHHHHHHHHHHHHHHHH
Confidence 9998 99999 9999999999999999988764
No 17
>KOG3146 consensus Dolichyl pyrophosphate phosphatase and related acid phosphatases [Lipid transport and metabolism]
Probab=99.38 E-value=1.8e-12 Score=110.12 Aligned_cols=71 Identities=41% Similarity=0.521 Sum_probs=56.1
Q ss_pred cccC-CCCchhHHHHHHHHHHHHH--HhCCCc-----hHHH---HHHHHHHHHhhcccchhhhhhhhhHHHHHHhhcCCC
Q 030450 70 LDSG-GMPSSHSATVSALAVAIGL--QEGSGS-----PSFA---IAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPP 138 (177)
Q Consensus 70 ~~sG-GMPSSHSA~v~aLat~igl--~~G~~s-----~~Fa---ia~v~A~IVmyDA~GVRr~aG~qA~~lN~L~~~~~~ 138 (177)
+++| |||||||+++...+++..+ +++... ..|+ +-+.++..|||+
T Consensus 91 ~~s~yGMPSSHSQfM~Ffs~y~~l~~y~~~~~~~~s~~~~i~s~~~laLs~~v~~s------------------------ 146 (228)
T KOG3146|consen 91 LRSGYGMPSSHSQFMGFFSVYSSLSVYKWLGTNNFSRFLFIKSGLLLALSFYVCYS------------------------ 146 (228)
T ss_pred cccCCCCCchHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHH------------------------
Confidence 3444 9999999999988887766 334333 2222 345678899998
Q ss_pred CCCCCCCCCccccCC-CChhHHHHHHHHHHHHHHhhc
Q 030450 139 DHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMR 174 (177)
Q Consensus 139 ~~~~~~~~~lre~lG-Htp~EVl~GallGivia~i~~ 174 (177)
|.|++ ||..||++|+++|.++|.+||
T Consensus 147 ----------RVyl~yHt~sQVv~G~ivG~l~g~~Wf 173 (228)
T KOG3146|consen 147 ----------RVYLKYHTLSQVVVGAIVGGLVGILWF 173 (228)
T ss_pred ----------HHHHHhccHHHHHHHHHhhhhHHHHHH
Confidence 99999 999999999999999998875
No 18
>PRK11837 undecaprenyl pyrophosphate phosphatase; Provisional
Probab=99.34 E-value=6.8e-12 Score=104.34 Aligned_cols=99 Identities=15% Similarity=0.192 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccccc--ccccc--ccCCCCchhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHhhc
Q 030450 39 LISAFLAFALAQFLKIFTTWYKEKRWD--SKKML--DSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYD 114 (177)
Q Consensus 39 l~sal~a~~~AQ~iK~~i~~lr~~~~d--~~~l~--~sGGMPSSHSA~v~aLat~igl~~G~~s~~Faia~v~A~IVmyD 114 (177)
+.+.+++..+.+++|..++|-||.... ..... .+.+|||+|++..+++++.+.+... .....+.+.++++|+++
T Consensus 65 ~~~~~~~~~~~~~lk~~~~r~RP~~~~~~~~~~~~~~~~SFPSgHa~~~~~~a~~~l~~~~--~~~~~~~~~~a~lva~S 142 (202)
T PRK11837 65 AIALAISLLVSWTIGHLFPHDRPFVEGIGYNFLHHAADDSFPSDHGTVIFTFALAFLFWHR--LWSGSLLMAIAVAIAWS 142 (202)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCccccccccCCCCCCCchHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH
Confidence 345567777889999999988875321 11111 2349999999999888765433221 12344667889999999
Q ss_pred ccchhhhhhhhhHHHHHHhhcCCCCCCCCCCCCccccCC-CChhHHHHHHHHHHHHHHhh
Q 030450 115 ASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLM 173 (177)
Q Consensus 115 A~GVRr~aG~qA~~lN~L~~~~~~~~~~~~~~~lre~lG-Htp~EVl~GallGivia~i~ 173 (177)
|.|+| |+|.||++|+++|++++++.
T Consensus 143 ----------------------------------RVylGvHypsDVlgG~~lG~~~~~~~ 168 (202)
T PRK11837 143 ----------------------------------RVYLGVHWPLDMLGALLVGMIGCLSA 168 (202)
T ss_pred ----------------------------------HHHhcCccHHHHHHHHHHHHHHHHHH
Confidence 99999 99999999999999998754
No 19
>PF01569 PAP2: PAP2 superfamily This family includes the following Prosite family; InterPro: IPR000326 This entry represents type 2 phosphatidic acid phosphatase (PAP2; 3.1.3.4 from EC) enzymes, such as phosphatidylglycerophosphatase B 3.1.3.27 from EC from Escherichia coli. PAP2 enzymes have a core structure consisting of a 5-helical bundle, where the beginning of the third helix binds the cofactor []. PAP2 enzymes catalyse the dephosphorylation of phosphatidate, yielding diacylglycerol and inorganic phosphate []. In eukaryotic cells, PAP activity has a central role in the synthesis of phospholipids and triacylglycerol through its product diacylglycerol, and it also generates and/or degrades lipid-signalling molecules that are related to phosphatidate. Other related enzymes have a similar core structure, including haloperoxidases such as bromoperoxidase (contains one core bundle, but forms a dimer), chloroperoxidases (contains two core bundles arranged as in other family dimers), bacitracin transport permease from Bacillus licheniformis, glucose-6-phosphatase from rat. The vanadium-dependent haloperoxidases exclusively catalyse the oxidation of halides, and act as histidine phosphatases, using histidine for the nucleophilic attack in the first step of the reaction []. Amino acid residues involved in binding phosphate/vanadate are conserved between the two families, supporting a proposal that vanadium passes through a tetrahedral intermediate during the reaction mechanism.; GO: 0003824 catalytic activity, 0016020 membrane; PDB: 1QI9_B 1IW8_A 1EOI_A 1D2T_A 1QHB_D 1UP8_C 2IPB_A 1VNS_A 1VNF_A 1VNE_A ....
Probab=99.33 E-value=7e-12 Score=92.74 Aligned_cols=103 Identities=30% Similarity=0.358 Sum_probs=75.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccccccc-----ccc----cCCCCchhHHHHHHHHHHHHHHhCCCchH----HHHHH
Q 030450 39 LISAFLAFALAQFLKIFTTWYKEKRWDSKK-----MLD----SGGMPSSHSATVSALAVAIGLQEGSGSPS----FAIAV 105 (177)
Q Consensus 39 l~sal~a~~~AQ~iK~~i~~lr~~~~d~~~-----l~~----sGGMPSSHSA~v~aLat~igl~~G~~s~~----Faia~ 105 (177)
+++.+.+..+.+++|..+++.||....... ... .++|||+|++..++.++.+....+..... +....
T Consensus 6 ~~~~~~~~~~~~~lk~~~~~~rP~~~~~~~~~~~~~~~~~~~~~sfPSgH~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 85 (129)
T PF01569_consen 6 LFALILAAILNNVLKWIFGRPRPFFYIPNYGLYPQHWPFQSPFNSFPSGHAAIAAAFAFFLAYYLGSRGWIRILLFLLAI 85 (129)
T ss_dssp HHHHHHHHHHCHHHHHHHTB--HHHHHHHHHCHHTCHHCHTTS-SSS-HHHHHHHHHHHHHHHHCCCCHHHSEEHHHHHH
T ss_pred ccchhhhHHHHHHHHHhhCCCCcCcccccCcccccCccccCCCCcCcchhhhhHHHHHhhhhhhhhccccccchhhHHHH
Confidence 455566666778889999987765322111 111 35999999999999999998888765443 44677
Q ss_pred HHHHHHhhcccchhhhhhhhhHHHHHHhhcCCCCCCCCCCCCccccCC-CChhHHHHHHHHHHHHHHhhcc
Q 030450 106 VLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMRN 175 (177)
Q Consensus 106 v~A~IVmyDA~GVRr~aG~qA~~lN~L~~~~~~~~~~~~~~~lre~lG-Htp~EVl~GallGivia~i~~~ 175 (177)
.++.++++. |.++| |++.||++|.++|.+++.+++.
T Consensus 86 ~~~~~v~~s----------------------------------rv~~g~H~~~Dvi~G~~lg~~~~~~~~~ 122 (129)
T PF01569_consen 86 VLAFLVALS----------------------------------RVYLGAHFFSDVIAGILLGILIAYLFYR 122 (129)
T ss_dssp HHHHHHHHH----------------------------------HHHTTSS-HHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHhhcC----------------------------------EEEcCeEehHHHHHHHHHHHHHHHHHHH
Confidence 888899987 89999 9999999999999999988654
No 20
>PRK10699 phosphatidylglycerophosphatase B; Provisional
Probab=99.32 E-value=5.7e-12 Score=108.49 Aligned_cols=66 Identities=26% Similarity=0.365 Sum_probs=51.5
Q ss_pred CCCchhHHHHHHHHHHH-HHH-hCCCchHHHHHHHHHHHHhhcccchhhhhhhhhHHHHHHhhcCCCCCCCCCCCCcccc
Q 030450 74 GMPSSHSATVSALAVAI-GLQ-EGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLREL 151 (177)
Q Consensus 74 GMPSSHSA~v~aLat~i-gl~-~G~~s~~Faia~v~A~IVmyDA~GVRr~aG~qA~~lN~L~~~~~~~~~~~~~~~lre~ 151 (177)
||||+||++.++++... ++. .......+.+.++|+..|+|+ |.|
T Consensus 158 SFPSGHa~~a~~~~l~~~~ll~~~~~~~~~~~~~~wa~~v~~S----------------------------------Rvy 203 (244)
T PRK10699 158 AFPSGHTMFAASWALLAVGLLWPRRRYKTVALLMLWATGVMGS----------------------------------RLL 203 (244)
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------------------HHH
Confidence 99999999987755432 322 222334455678899999999 999
Q ss_pred CC-CChhHHHHHHHHHHHHHHhh
Q 030450 152 LG-HTPLQVVAGGILGCVVAFLM 173 (177)
Q Consensus 152 lG-Htp~EVl~GallGivia~i~ 173 (177)
+| |+|.||++|.++|.+++.+.
T Consensus 204 LGvH~psDVlaG~llG~~~~~l~ 226 (244)
T PRK10699 204 LGMHWPRDLVVATLISWLLVTVA 226 (244)
T ss_pred ccCcCHHHHHHHHHHHHHHHHHH
Confidence 99 99999999999999887664
No 21
>cd03381 PAP2_glucose_6_phosphatase PAP2_like proteins, glucose-6-phosphatase subfamily. Glucose-6-phosphatase converts glucose-6-phosphate into free glucose and is active in the lumen of the endoplasmic reticulum, where it is bound to the membrane. The generation of free glucose is an important control point in metabolism, and stands at the end of gluconeogenesis and the release of glucose from glycogen. Deficiency of glucose-6-phosphatase leads to von Gierke's disease.
Probab=99.32 E-value=8.7e-12 Score=106.60 Aligned_cols=102 Identities=25% Similarity=0.247 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccccccc----------------cccccC-CCCchhHHHHHHHHHHHHHH------hC
Q 030450 39 LISAFLAFALAQFLKIFTTWYKEKRWDSK----------------KMLDSG-GMPSSHSATVSALAVAIGLQ------EG 95 (177)
Q Consensus 39 l~sal~a~~~AQ~iK~~i~~lr~~~~d~~----------------~l~~sG-GMPSSHSA~v~aLat~igl~------~G 95 (177)
+++..++..+.+++|.++.+-||.-|... ...++| ||||+||...+++...+... ..
T Consensus 21 ~~~~~~~~~ln~vlK~ii~r~RP~~~~~~~~~~~~~~~p~~~~~~l~c~tgysfPSGHam~a~a~~~~l~~~l~~~~~~r 100 (235)
T cd03381 21 LWVAVIGDWLNLVFKWILFGQRPYWWVHETDYYSNSSVPKIEQFPLTCETGPGSPSGHAMGTTAVLLVMVTALLSHLAGR 100 (235)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCchhcccccccccccccccccccccCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 34444444478999999998887642110 112345 99999998888776655432 11
Q ss_pred CCch-----HHHHHHHHHHHHhhcccchhhhhhhhhHHHHHHhhcCCCCCCCCCCCCccccCC-CChhHHHHHHHHHHHH
Q 030450 96 SGSP-----SFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVV 169 (177)
Q Consensus 96 ~~s~-----~Faia~v~A~IVmyDA~GVRr~aG~qA~~lN~L~~~~~~~~~~~~~~~lre~lG-Htp~EVl~GallGivi 169 (177)
..+. ...+...+.+.|+++ |.|+| |+|.||++|.++|+++
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~V~~S----------------------------------RvYLgvHfpsDVlaG~~lGi~~ 146 (235)
T cd03381 101 KRSRFLRVMLWLVFWGVQLAVCLS----------------------------------RIYLAAHFPHQVIAGVISGIAV 146 (235)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHH----------------------------------HHhhcCCCHHHHHHHHHHHHHH
Confidence 1111 234455677789998 99999 9999999999999999
Q ss_pred HHhhc
Q 030450 170 AFLMR 174 (177)
Q Consensus 170 a~i~~ 174 (177)
+.++.
T Consensus 147 ~~~~~ 151 (235)
T cd03381 147 AETFS 151 (235)
T ss_pred HHHHH
Confidence 87653
No 22
>smart00014 acidPPc Acid phosphatase homologues.
Probab=99.28 E-value=2.8e-11 Score=90.00 Aligned_cols=99 Identities=25% Similarity=0.310 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccc---------ccccc-ccCCCCchhHHHHHHHHHHHHHHhCC---CchHHHHHHHH
Q 030450 41 SAFLAFALAQFLKIFTTWYKEKRWD---------SKKML-DSGGMPSSHSATVSALAVAIGLQEGS---GSPSFAIAVVL 107 (177)
Q Consensus 41 sal~a~~~AQ~iK~~i~~lr~~~~d---------~~~l~-~sGGMPSSHSA~v~aLat~igl~~G~---~s~~Faia~v~ 107 (177)
....+.++.+++|..+.+-||..++ ..... ...+|||+|+++.++.++.+...... +.......+++
T Consensus 3 ~~~~~~~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~~~~~~~sfPSgHa~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 82 (116)
T smart00014 3 LAVVSLLFTGVIKNYFGRPRPFFLDIGDACCTPNFLLTLEAGYSFPSGHTAFAFAFALFLLLYLPARAARKLLIILLLLL 82 (116)
T ss_pred HHHHHHHHHHHHHHHhCCCCcCcccccccccCcchhhhcCCCCCcChHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 3567778889999999998875432 11222 23499999999999999988865432 22334456778
Q ss_pred HHHHhhcccchhhhhhhhhHHHHHHhhcCCCCCCCCCCCCccccCC-CChhHHHHHHHHHHHHHHhh
Q 030450 108 ACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLM 173 (177)
Q Consensus 108 A~IVmyDA~GVRr~aG~qA~~lN~L~~~~~~~~~~~~~~~lre~lG-Htp~EVl~GallGivia~i~ 173 (177)
+..+++. |.|+| |+|.||++|+++|.+++.++
T Consensus 83 ~~~~~~s----------------------------------Ri~~g~H~~~Dv~~G~~lG~~v~~~~ 115 (116)
T smart00014 83 ALVVGFS----------------------------------RVYLGAHWPSDVLAGSLLGILIAAVL 115 (116)
T ss_pred HHHHHHH----------------------------------HHHhcccCHHHHHHHHHHHHHHHHHc
Confidence 8888887 89999 99999999999999998764
No 23
>cd01610 PAP2_like PAP2_like proteins, a super-family of histidine phosphatases and vanadium haloperoxidases, includes type 2 phosphatidic acid phosphatase or lipid phosphate phosphatase (LPP), Glucose-6-phosphatase, Phosphatidylglycerophosphatase B and bacterial acid phosphatase, vanadium chloroperoxidases, vanadium bromoperoxidases, and several other mostly uncharacterized subfamilies. Several members of this superfamily have been predicted to be transmembrane proteins.
Probab=99.27 E-value=4.2e-11 Score=86.45 Aligned_cols=100 Identities=27% Similarity=0.291 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccccccc------c-c-ccCCCCchhHHHHHHHHHHHHHHhCCCc---hHHHHHHHHH
Q 030450 40 ISAFLAFALAQFLKIFTTWYKEKRWDSKK------M-L-DSGGMPSSHSATVSALAVAIGLQEGSGS---PSFAIAVVLA 108 (177)
Q Consensus 40 ~sal~a~~~AQ~iK~~i~~lr~~~~d~~~------l-~-~sGGMPSSHSA~v~aLat~igl~~G~~s---~~Faia~v~A 108 (177)
........+.+.+|.++.+-||...+... . - ...+|||.|++..+++++.+....+... ....+...++
T Consensus 10 ~~~~~~~~~~~~~k~~~~~~rP~~~~~~~~~~~~~~~~~~~~sfPSgH~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 89 (122)
T cd01610 10 LALLAGLLLTGVLKYLFGRPRPYFLLRCGPDGDPLLLTEGGYSFPSGHAAFAFALALFLALLLPRRLLRLLLGLLLLLLA 89 (122)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCChHHhcCCccchhhhcCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444445789999998777765422211 1 1 2449999999999999999998876432 4455677888
Q ss_pred HHHhhcccchhhhhhhhhHHHHHHhhcCCCCCCCCCCCCccccCC-CChhHHHHHHHHHHHHHHhh
Q 030450 109 CIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLM 173 (177)
Q Consensus 109 ~IVmyDA~GVRr~aG~qA~~lN~L~~~~~~~~~~~~~~~lre~lG-Htp~EVl~GallGivia~i~ 173 (177)
..+++. |.++| |++.||++|.++|.+++.++
T Consensus 90 ~~~~~s----------------------------------ri~~g~H~~~Dv~~G~~lg~~~~~~~ 121 (122)
T cd01610 90 LLVGLS----------------------------------RVYLGVHYPSDVLAGALLGILVALLV 121 (122)
T ss_pred HHHHHH----------------------------------HHHhcccCHHHHHHHHHHHHHHHHHH
Confidence 999988 88999 99999999999999998765
No 24
>cd03396 PAP2_like_6 PAP2_like_6 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which mainly contains bacterial proteins, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.22 E-value=6.5e-11 Score=96.86 Aligned_cols=103 Identities=17% Similarity=0.123 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccccc-------c-------cccc-cCCCCchhHHHHHHHHHHHHHHhCCCc----h
Q 030450 39 LISAFLAFALAQFLKIFTTWYKEKRWDS-------K-------KMLD-SGGMPSSHSATVSALAVAIGLQEGSGS----P 99 (177)
Q Consensus 39 l~sal~a~~~AQ~iK~~i~~lr~~~~d~-------~-------~l~~-sGGMPSSHSA~v~aLat~igl~~G~~s----~ 99 (177)
+++...+..+.+++|..++|-||...+- . .-.+ ..+|||.|+++.++++....+...... .
T Consensus 73 ~~~~~~~~~v~~~lK~~~~r~RP~~~~~~gg~~~~~~~~~~~~~~~~~~~SFPSGHas~af~~~~~~~~~~~~~~~~~~~ 152 (197)
T cd03396 73 ILVIGLGLLVVAILKSHWGRPRPWDLTEFGGDAPYTPLFSGPSNGCGKGCSFPSGHASAGFALLALYFLFRRRRPRLARL 152 (197)
T ss_pred HHHHHHHHHHHHHHHhhcCCCChhhHHHhCCCCCCCcccccCCCCCCCCCcCCchhHHHHHHHHHHHHHHHHhcchHHHH
Confidence 4444555566788999998888764320 0 0112 239999999999998765444333222 2
Q ss_pred HHHHHHHHHHHHhhcccchhhhhhhhhHHHHHHhhcCCCCCCCCCCCCccccCC-CChhHHHHHHHHHHHHHHhhcc
Q 030450 100 SFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMRN 175 (177)
Q Consensus 100 ~Faia~v~A~IVmyDA~GVRr~aG~qA~~lN~L~~~~~~~~~~~~~~~lre~lG-Htp~EVl~GallGivia~i~~~ 175 (177)
...++++++.+|.++ |.+.| |.|.||++|+++|.+++++.|.
T Consensus 153 ~~~~~~~~~~~vg~s----------------------------------Ri~~G~Hf~SDvl~g~~ig~~~~~~~~~ 195 (197)
T cd03396 153 VLAAGLALGALMGLA----------------------------------RMARGAHFLSDVLWSLLLVWLIALLLYR 195 (197)
T ss_pred HHHHHHHHHHHHHHH----------------------------------HHHcCCchHHHHHHHHHHHHHHHHHHHH
Confidence 334567788999998 89999 9999999999999999998874
No 25
>PLN02731 Putative lipid phosphate phosphatase
Probab=99.16 E-value=1.5e-10 Score=103.67 Aligned_cols=103 Identities=21% Similarity=0.215 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccc-----cccc---------------cccccC--CCCchhHHHHHHHHHHHHHHh-C
Q 030450 39 LISAFLAFALAQFLKIFTTWYKEKR-----WDSK---------------KMLDSG--GMPSSHSATVSALAVAIGLQE-G 95 (177)
Q Consensus 39 l~sal~a~~~AQ~iK~~i~~lr~~~-----~d~~---------------~l~~sG--GMPSSHSA~v~aLat~igl~~-G 95 (177)
+++.+++.++.+++|..+.|.||.- +|.. ..+..| +|||+||++.++..+++++.. |
T Consensus 123 l~s~~~t~liT~ilK~~vGRpRPdfl~rC~P~~~~~~~~~~~~iCt~~~~~l~dg~~SFPSGHSS~sfagl~fLslyL~~ 202 (333)
T PLN02731 123 LYSVLVTAVLTDAIKNAVGRPRPDFFWRCFPDGKALYDSLGDVICHGDKSVIREGHKSFPSGHTSWSFSGLGFLSLYLSG 202 (333)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCchhhcCccccccccccccceecCchhcccccCCCCCchhHHHHHHHHHHHHHHHHH
Confidence 4455677778899999999888642 1211 112233 999999999999999988743 1
Q ss_pred C----C-----ch--HHHHHHHHHHHHhhcccchhhhhhhhhHHHHHHhhcCCCCCCCCCCCCccccCC-CChhHHHHHH
Q 030450 96 S----G-----SP--SFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGG 163 (177)
Q Consensus 96 ~----~-----s~--~Faia~v~A~IVmyDA~GVRr~aG~qA~~lN~L~~~~~~~~~~~~~~~lre~lG-Htp~EVl~Ga 163 (177)
. + .. ...+.+++|+.|+++ |.+.+ |.|.||++|+
T Consensus 203 kl~~~~~~~~~~rl~l~~lpll~A~lIalS----------------------------------RV~Dy~Hh~sDVlaG~ 248 (333)
T PLN02731 203 KIQAFDGKGHVAKLCIVILPLLFAALVGIS----------------------------------RVDDYWHHWQDVFAGG 248 (333)
T ss_pred hhhhhcccchhHHHHHHHHHHHHHHHHHHH----------------------------------HHhcCCCCHHHHHHHH
Confidence 1 0 11 123457789999998 88999 9999999999
Q ss_pred HHHHHHHHhhcc
Q 030450 164 ILGCVVAFLMRN 175 (177)
Q Consensus 164 llGivia~i~~~ 175 (177)
++|+++|++.|.
T Consensus 249 lLG~~iA~~~Y~ 260 (333)
T PLN02731 249 LLGLAISTICYL 260 (333)
T ss_pred HHHHHHHHHHHH
Confidence 999999998775
No 26
>PLN02250 lipid phosphate phosphatase
Probab=99.16 E-value=1.3e-10 Score=103.27 Aligned_cols=103 Identities=21% Similarity=0.197 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccc-----ccc----------------cccccC--CCCchhHHHHHHHHHHHHHHh-
Q 030450 39 LISAFLAFALAQFLKIFTTWYKEKRW-----DSK----------------KMLDSG--GMPSSHSATVSALAVAIGLQE- 94 (177)
Q Consensus 39 l~sal~a~~~AQ~iK~~i~~lr~~~~-----d~~----------------~l~~sG--GMPSSHSA~v~aLat~igl~~- 94 (177)
+++..++.++++++|..+.|.||.-+ |.. ..+..| +|||+||++.++..+++++..
T Consensus 104 l~sv~~t~lit~~lK~~vGRpRPdfl~rC~P~~~~~~~~~~~~~~Ctg~~~~l~dg~~SFPSGHSS~afa~~~fLslyL~ 183 (314)
T PLN02250 104 LFSVLITGVITDAIKDAVGRPRPDFFWRCFPDGKGVFHPVTTDVLCTGAKSVIKEGHKSFPSGHTSWSFAGLGFLSLYLS 183 (314)
T ss_pred HHHHHHHHHHHHHHHhhhCCCCCChhhhcCccccccccccccceeecCCcccccccCCCCCchhHHHHHHHHHHHHHHHH
Confidence 44556677888999999999886532 211 122233 999999999999999887743
Q ss_pred C----CC---c--hH--HHHHHHHHHHHhhcccchhhhhhhhhHHHHHHhhcCCCCCCCCCCCCccccCC-CChhHHHHH
Q 030450 95 G----SG---S--PS--FAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAG 162 (177)
Q Consensus 95 G----~~---s--~~--Faia~v~A~IVmyDA~GVRr~aG~qA~~lN~L~~~~~~~~~~~~~~~lre~lG-Htp~EVl~G 162 (177)
+ ++ . .. ..+.+++|++|+++ |.+.+ |.|.||++|
T Consensus 184 ~kl~~~~~~~~~~r~~l~~lpll~A~lVa~S----------------------------------RI~dy~Hh~sDVlaG 229 (314)
T PLN02250 184 GKIRVFDRRGHVAKLCIVFLPLLVAALVGVS----------------------------------RVDDYWHHWQDVFAG 229 (314)
T ss_pred HhhccccccchhHHHHHHHHHHHHHHHHHHH----------------------------------HHhcCCcCHHHHHHH
Confidence 1 11 1 11 23456788999998 88999 999999999
Q ss_pred HHHHHHHHHhhcc
Q 030450 163 GILGCVVAFLMRN 175 (177)
Q Consensus 163 allGivia~i~~~ 175 (177)
+++|+++|++.|.
T Consensus 230 ~lIG~~~A~~~y~ 242 (314)
T PLN02250 230 ALIGLTVASFCYL 242 (314)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988775
No 27
>COG0671 PgpB Membrane-associated phospholipid phosphatase [Lipid metabolism]
Probab=99.14 E-value=2e-10 Score=88.85 Aligned_cols=69 Identities=30% Similarity=0.461 Sum_probs=57.1
Q ss_pred cCCCCchhHHHHHHHHHHHHHHhCCCc------hHHHHHHHHHHHHhhcccchhhhhhhhhHHHHHHhhcCCCCCCCCCC
Q 030450 72 SGGMPSSHSATVSALAVAIGLQEGSGS------PSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSV 145 (177)
Q Consensus 72 sGGMPSSHSA~v~aLat~igl~~G~~s------~~Faia~v~A~IVmyDA~GVRr~aG~qA~~lN~L~~~~~~~~~~~~~ 145 (177)
..+|||+|++..++.++...+...... ....+.++++..|+++
T Consensus 133 ~~sfPSgHt~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~~S------------------------------- 181 (232)
T COG0671 133 GYSFPSGHAAGAAAAALLLALLLPLRRALLRRVLLLILLLLLAALVGLS------------------------------- 181 (232)
T ss_pred cCCCCChhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH-------------------------------
Confidence 348999999999998888887664322 2335778899999999
Q ss_pred CCccccCC-CChhHHHHHHHHHHHHHHhhc
Q 030450 146 RPLRELLG-HTPLQVVAGGILGCVVAFLMR 174 (177)
Q Consensus 146 ~~lre~lG-Htp~EVl~GallGivia~i~~ 174 (177)
|.|+| |+|.||++|.++|++++.+.+
T Consensus 182 ---Rv~lGvH~~~DVi~G~~~g~~~~~~~~ 208 (232)
T COG0671 182 ---RVYLGVHYPSDVIGGALLGALAALLLL 208 (232)
T ss_pred ---HHhcccccchHHHhhHHHHHHHHHHHH
Confidence 99999 999999999999999987654
No 28
>PLN02715 lipid phosphate phosphatase
Probab=99.11 E-value=3.1e-10 Score=101.37 Aligned_cols=103 Identities=22% Similarity=0.245 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcc-----cccccc---------------ccccC--CCCchhHHHHHHHHHHHHHHh-C
Q 030450 39 LISAFLAFALAQFLKIFTTWYKEK-----RWDSKK---------------MLDSG--GMPSSHSATVSALAVAIGLQE-G 95 (177)
Q Consensus 39 l~sal~a~~~AQ~iK~~i~~lr~~-----~~d~~~---------------l~~sG--GMPSSHSA~v~aLat~igl~~-G 95 (177)
+++.+++.++.+++|..+.|.||. .+|... .+..| +|||+||++.++.++++++.. +
T Consensus 129 ~~al~~t~lit~~lK~~vGRpRPdfl~rC~Pd~~~~~~~l~~~iCt~~~~~l~dg~~SFPSGHSS~sfagl~~Lsl~L~~ 208 (327)
T PLN02715 129 LFAVLITGVITDSIKVATGRPRPNFYWRCFPDGKELYDALGGVICHGKAAEVKEGHKSFPSGHTSWSFAGLTFLSLYLSG 208 (327)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCCchhhcCccccccccccccccccCccccccccCCCCCchhHHHHHHHHHHHHHHHHH
Confidence 445566778889999999988865 222211 12234 999999999999999988743 2
Q ss_pred C----C---c---h-HHHHHHHHHHHHhhcccchhhhhhhhhHHHHHHhhcCCCCCCCCCCCCccccCC-CChhHHHHHH
Q 030450 96 S----G---S---P-SFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGG 163 (177)
Q Consensus 96 ~----~---s---~-~Faia~v~A~IVmyDA~GVRr~aG~qA~~lN~L~~~~~~~~~~~~~~~lre~lG-Htp~EVl~Ga 163 (177)
. + . . +..+.+++|+.|+++ |.+.+ |.|.||++|+
T Consensus 209 kl~~~~~~~~~~k~~l~~lpll~A~lIalS----------------------------------Rv~Dy~Hh~sDVlaG~ 254 (327)
T PLN02715 209 KIKAFNGEGHVAKLCLVIFPLLAACLVGIS----------------------------------RVDDYWHHWQDVFAGA 254 (327)
T ss_pred hhccccccchHHHHHHHHHHHHHHHHHHHH----------------------------------HHHcCCCCHHHHHHHH
Confidence 1 1 0 1 223456788899988 88999 9999999999
Q ss_pred HHHHHHHHhhcc
Q 030450 164 ILGCVVAFLMRN 175 (177)
Q Consensus 164 llGivia~i~~~ 175 (177)
++|++++++.|.
T Consensus 255 lLG~~~a~~~y~ 266 (327)
T PLN02715 255 LIGILVAAFCYR 266 (327)
T ss_pred HHHHHHHHHHHH
Confidence 999999988765
No 29
>cd03380 PAP2_like_1 PAP2_like_1 proteins, a sub-family of PAP2, containing bacterial acid phosphatase, vanadium chloroperoxidases and vanadium bromoperoxidases.
Probab=99.05 E-value=1.5e-09 Score=89.36 Aligned_cols=90 Identities=21% Similarity=0.067 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHhhhccccc---ccccc-------ccCCCCchhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHhhccc
Q 030450 47 ALAQFLKIFTTWYKEKRWD---SKKML-------DSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDAS 116 (177)
Q Consensus 47 ~~AQ~iK~~i~~lr~~~~d---~~~l~-------~sGGMPSSHSA~v~aLat~igl~~G~~s~~Faia~v~A~IVmyDA~ 116 (177)
.++..+|..++|.||...+ +..+. ..++|||.|+++.+++++.+....+-. +...+.++..+.++
T Consensus 107 ~~~~~~K~~~~r~RP~~~~~~~~~~~~~~~~~~~~~~SfPSGHa~~a~a~a~~l~~~~~~~---~~~~~~~a~~~~~S-- 181 (209)
T cd03380 107 IATWDAKYHYNRPRPFVAIRLQWLPICTPEEGTPKHPSYPSGHATFGGAAALVLAELFPER---AAELLARAAEAGNS-- 181 (209)
T ss_pred HHHHHHHHHHCCCCchhhhccCCCcccCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH--
Confidence 3468899999999987655 44333 356999999999999999998877632 23335677778877
Q ss_pred chhhhhhhhhHHHHHHhhcCCCCCCCCCCCCccccCC-CChhHHHHHHHHHHHHHHhh
Q 030450 117 GVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLM 173 (177)
Q Consensus 117 GVRr~aG~qA~~lN~L~~~~~~~~~~~~~~~lre~lG-Htp~EVl~GallGivia~i~ 173 (177)
|.|.| |+|.||++|.++|..++-.+
T Consensus 182 --------------------------------Rv~~G~H~~sDv~aG~~lG~~i~~~~ 207 (209)
T cd03380 182 --------------------------------RVVAGVHWPSDVEAGRILGEAIAAAL 207 (209)
T ss_pred --------------------------------hhhCCeecHHHHHHHHHHHHHHHHHH
Confidence 89999 99999999999999987544
No 30
>cd03397 PAP2_acid_phosphatase PAP2, bacterial acid phosphatase or class A non-specific acid phosphatases. These enzymes catalyze phosphomonoester hydrolysis, with optimal activity in low pH conditions. They are secreted into the periplasmic space, and their physiological role remains to be determined.
Probab=98.94 E-value=6e-09 Score=88.21 Aligned_cols=91 Identities=16% Similarity=0.148 Sum_probs=69.1
Q ss_pred HHHHHHHHHhhhcccccccc---------ccccCCCCchhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHhhcccchh
Q 030450 49 AQFLKIFTTWYKEKRWDSKK---------MLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVR 119 (177)
Q Consensus 49 AQ~iK~~i~~lr~~~~d~~~---------l~~sGGMPSSHSA~v~aLat~igl~~G~~s~~Faia~v~A~IVmyDA~GVR 119 (177)
.+.+|..+++.||...+... .-..++|||+|++..++.++.+....+.. +...+.++..+.++
T Consensus 117 ~~~~K~~~~r~RP~~~~~~~~~~~~~~~~~~~~~SfPSGHa~~a~a~a~~La~~~p~~---~~~l~~~a~~~g~S----- 188 (232)
T cd03397 117 TYPAKKYYNRPRPFVLNDEPICTPPDESGLAKDGSYPSGHTAAGYAWALILAELVPER---ADEILARGSEYGQS----- 188 (232)
T ss_pred HHHHHhhhCCCCCCccCCCCcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH-----
Confidence 78899999998876533211 12467999999999999998887765422 22234567788887
Q ss_pred hhhhhhhHHHHHHhhcCCCCCCCCCCCCccccCC-CChhHHHHHHHHHHHHHHhhccC
Q 030450 120 LHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMRNS 176 (177)
Q Consensus 120 r~aG~qA~~lN~L~~~~~~~~~~~~~~~lre~lG-Htp~EVl~GallGivia~i~~~~ 176 (177)
|.+.| |+|.||++|.++|..+...+.++
T Consensus 189 -----------------------------Rv~~GvH~psDV~aG~~lG~~~~a~l~~~ 217 (232)
T cd03397 189 -----------------------------RIVCGVHWPSDVMGGRIMAAALVAALLAD 217 (232)
T ss_pred -----------------------------HHhcCCcCHHHHHHHHHHHHHHHHHHhcC
Confidence 99999 99999999999999987766543
No 31
>cd03398 PAP2_haloperoxidase PAP2, haloperoxidase_like subfamily. Haloperoxidases catalyze the oxidation of halides such as bromide or chloride by hydrogen peroxide, which results in subsequent halogenation of organic substrates, or halide-assisted disproportionation of hydrogen peroxide forming dioxygen. They are likely to participate in the biosynthesis of halogenated natural products, such as volatile halogenated hydrocarbons, chiral halogenated terpenes, acetogenins and indoles.
Probab=98.72 E-value=8.9e-08 Score=80.57 Aligned_cols=93 Identities=22% Similarity=0.093 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHhhhcccc----------------cccccc---ccCCCCchhHHHHHHHHHHHHHHhCCCch--------
Q 030450 47 ALAQFLKIFTTWYKEKRW----------------DSKKML---DSGGMPSSHSATVSALAVAIGLQEGSGSP-------- 99 (177)
Q Consensus 47 ~~AQ~iK~~i~~lr~~~~----------------d~~~l~---~sGGMPSSHSA~v~aLat~igl~~G~~s~-------- 99 (177)
+.+...|...++.||... +|..+. ..+++||.|+++.++.++.+....|.+..
T Consensus 100 ia~~~~K~~~~r~RP~~~~~~~~~~~~~~~~~~~~w~p~~~~p~~psyPSGHa~~a~a~a~vL~~~~~~~~~~~~~~~~~ 179 (232)
T cd03398 100 IAAWDAKYHYRRWRPVTAIRLADTDGNPATEADPYWLPLAGTPPHPSYPSGHATFAGAAATVLKALFGSDKVPDTVSEPD 179 (232)
T ss_pred HHHHHHHhhcCccCHHHHHHhhcccCCCCCCCCCcccccCCCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCCCCccccc
Confidence 345678999988886531 133333 35699999999999999999988775321
Q ss_pred ----------HHHHHHHHHHHHhhcccchhhhhhhhhHHHHHHhhcCCCCCCCCCCCCccccCC-CChhHHHHHHHHHHH
Q 030450 100 ----------SFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCV 168 (177)
Q Consensus 100 ----------~Faia~v~A~IVmyDA~GVRr~aG~qA~~lN~L~~~~~~~~~~~~~~~lre~lG-Htp~EVl~GallGiv 168 (177)
.+.....++..+.++ |.|.| |+|.||.+|..+|..
T Consensus 180 ~~~~~~~~~~~~~~~~~~a~~~~~S----------------------------------Rvy~GvH~~sDv~~G~~lG~~ 225 (232)
T cd03398 180 EGGPSTGVTRVWAELNELADEVAIS----------------------------------RVYAGVHFRSDDAAGAALGEQ 225 (232)
T ss_pred cCCCCCCCcccHhHHHHHHHHHHHH----------------------------------HHhccccChHHHHHHHHHHHH
Confidence 344455667777777 99999 999999999999999
Q ss_pred HHHhh
Q 030450 169 VAFLM 173 (177)
Q Consensus 169 ia~i~ 173 (177)
++-.+
T Consensus 226 va~~v 230 (232)
T cd03398 226 IGAAA 230 (232)
T ss_pred HHHHH
Confidence 98643
No 32
>KOG2822 consensus Sphingoid base-phosphate phosphatase [Lipid transport and metabolism]
Probab=98.69 E-value=3e-08 Score=90.36 Aligned_cols=100 Identities=19% Similarity=0.290 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccccccccc------ccCCCCchhHHHHHHHHHHH----HHHhCCCchHH----HHHHH
Q 030450 41 SAFLAFALAQFLKIFTTWYKEKRWDSKKML------DSGGMPSSHSATVSALAVAI----GLQEGSGSPSF----AIAVV 106 (177)
Q Consensus 41 sal~a~~~AQ~iK~~i~~lr~~~~d~~~l~------~sGGMPSSHSA~v~aLat~i----gl~~G~~s~~F----aia~v 106 (177)
.-..+.-+.|.+|..+-.-|++.+...|+= ..-||||+|+++.+|++... ...+....|.+ .++.+
T Consensus 119 i~~~~~Ylggc~KD~~~lPRP~sPPvvrltls~~~~~EYG~PStHt~natais~~~~~~ls~~d~~s~p~~~lgl~lv~~ 198 (407)
T KOG2822|consen 119 IWVLVMYLGGCIKDYWCLPRPSSPPVVRLTLSEDTTKEYGMPSTHTMNATAISFYFFLVLSTMDRESYPIQYLGLSLVLL 198 (407)
T ss_pred HHHHHHHHhhhhhheeecCCCCCCCeEEEEeccchhhhhCCCcchhhhhhHHHHHHHHHHHHhchhhhHHHHHHHHHHHH
Confidence 334566778999999988888876665542 23499999999999888773 22234444422 23444
Q ss_pred HHHHHhhcccchhhhhhhhhHHHHHHhhcCCCCCCCCCCCCccccCC-CChhHHHHHHHHHHHHHHhhc
Q 030450 107 LACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMR 174 (177)
Q Consensus 107 ~A~IVmyDA~GVRr~aG~qA~~lN~L~~~~~~~~~~~~~~~lre~lG-Htp~EVl~GallGivia~i~~ 174 (177)
+-..|+.. |.|.| |+..|+++|.++|+++..+.|
T Consensus 199 y~~lv~lg----------------------------------RiY~GMHgvlDi~sG~ligvl~~~~~~ 233 (407)
T KOG2822|consen 199 YYALVCLG----------------------------------RIYCGMHGVLDIVSGLLIGVLILILRY 233 (407)
T ss_pred HHHHHHHH----------------------------------HHHhcchHHHHHHhhhHHHHHHhhhhh
Confidence 55566666 89999 999999999999999987765
No 33
>cd03386 PAP2_Aur1_like PAP2_like proteins, Aur1_like subfamily. Yeast Aur1p or Ipc1p is necessary for the addition of inositol phosphate to ceramide, an essential step in yeast sphingolipid synthesis, and is the target of several antifungal compounds such as aureobasidin.
Probab=98.50 E-value=3e-07 Score=74.52 Aligned_cols=68 Identities=22% Similarity=0.213 Sum_probs=55.9
Q ss_pred cCCCCchhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHhhcccchhhhhhhhhHHHHHHhhcCCCCCCCCCCCCcccc
Q 030450 72 SGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLREL 151 (177)
Q Consensus 72 sGGMPSSHSA~v~aLat~igl~~G~~s~~Faia~v~A~IVmyDA~GVRr~aG~qA~~lN~L~~~~~~~~~~~~~~~lre~ 151 (177)
...|||.|++..+.++..+...... .+..+..+++++++++ +.+
T Consensus 116 ~~~fPS~H~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~i~~s----------------------------------~v~ 159 (186)
T cd03386 116 FNAFPSLHVAWAVLAALFLWRHRRR--LLRWLAVLWPLLIWLS----------------------------------TLY 159 (186)
T ss_pred cceeCcHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH----------------------------------HHH
Confidence 4499999999999888877665431 2455678889999988 899
Q ss_pred CC-CChhHHHHHHHHHHHHHHhhcc
Q 030450 152 LG-HTPLQVVAGGILGCVVAFLMRN 175 (177)
Q Consensus 152 lG-Htp~EVl~GallGivia~i~~~ 175 (177)
+| |++.||++|+++|.++..+.+.
T Consensus 160 ~~~H~~~Dv~~G~~l~~~~~~~~~~ 184 (186)
T cd03386 160 LGNHYFIDLVGGIALALLSFYLARR 184 (186)
T ss_pred HCCccHHHHHHHHHHHHHHHHHhhc
Confidence 99 9999999999999998877654
No 34
>KOG3030 consensus Lipid phosphate phosphatase and related enzymes of the PAP2 family [Lipid transport and metabolism]
Probab=98.38 E-value=1.2e-06 Score=78.26 Aligned_cols=103 Identities=21% Similarity=0.276 Sum_probs=72.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcc-----cccccc-------------ccccC-----------CCCchhHHHHHHHHHH
Q 030450 39 LISAFLAFALAQFLKIFTTWYKEK-----RWDSKK-------------MLDSG-----------GMPSSHSATVSALAVA 89 (177)
Q Consensus 39 l~sal~a~~~AQ~iK~~i~~lr~~-----~~d~~~-------------l~~sG-----------GMPSSHSA~v~aLat~ 89 (177)
++...+..++..++|..+.|+||. ++|+.. ..-+| .|||.|||+.++-+++
T Consensus 116 lfgl~~t~~~t~~~K~~vGRlRP~Fl~vC~P~~~~~~~~~~~~~yi~~~~Ctg~~~~~i~e~rkSFPSGHsS~s~y~~~f 195 (317)
T KOG3030|consen 116 LFGLAATQLFTDIIKLAVGRLRPHFLDVCQPDGTDGSTCSDSNLYIEDFICTGPDPDVVREGRKSFPSGHSSFSFYAMGF 195 (317)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCeeccccCCccCCCCCcccccccccceeCCCCHHHHHHHHcCCCCccHHHHHHHHHH
Confidence 445555666678899999998875 466643 11233 7999999999999999
Q ss_pred HHHHh-----CCC-c----hHHH-HHHHHHHHHhhcccchhhhhhhhhHHHHHHhhcCCCCCCCCCCCCccccCC-CChh
Q 030450 90 IGLQE-----GSG-S----PSFA-IAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLG-HTPL 157 (177)
Q Consensus 90 igl~~-----G~~-s----~~Fa-ia~v~A~IVmyDA~GVRr~aG~qA~~lN~L~~~~~~~~~~~~~~~lre~lG-Htp~ 157 (177)
+++.. ... + +... +.+.+|+.|..+ |..-- |-+.
T Consensus 196 lalyl~~~~~~~~~~rllr~~l~f~~l~~A~~v~lS----------------------------------RV~DYkHHws 241 (317)
T KOG3030|consen 196 LALYLQARLFWFGRGRLLRPLLQFLPLMLALLVGLS----------------------------------RVSDYKHHWS 241 (317)
T ss_pred HHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHeee----------------------------------hhcccccccH
Confidence 99643 222 2 2222 235567778776 44434 8899
Q ss_pred HHHHHHHHHHHHHHhhcc
Q 030450 158 QVVAGGILGCVVAFLMRN 175 (177)
Q Consensus 158 EVl~GallGivia~i~~~ 175 (177)
||++|+++|+.+|++.+.
T Consensus 242 DV~aG~liG~~~A~~~~~ 259 (317)
T KOG3030|consen 242 DVLAGALIGAFVAYFLYR 259 (317)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999999988653
No 35
>KOG4268 consensus Uncharacterized conserved protein containing PAP2 domain [Function unknown]
Probab=98.35 E-value=2.8e-06 Score=70.30 Aligned_cols=100 Identities=19% Similarity=0.228 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccccccccc----ccCCCCchhHHHHHHHHHHHHHHhCCCchHHHH-HHHHHHHHh
Q 030450 38 PLISAFLAFALAQFLKIFTTWYKEKRWDSKKML----DSGGMPSSHSATVSALAVAIGLQEGSGSPSFAI-AVVLACIVM 112 (177)
Q Consensus 38 ~l~sal~a~~~AQ~iK~~i~~lr~~~~d~~~l~----~sGGMPSSHSA~v~aLat~igl~~G~~s~~Fai-a~v~A~IVm 112 (177)
.++.-+.+.+.-.++|.+++|-||-+-.+..+- .--.|||+|++=++-++.+..-..-..-|...+ ...||++|.
T Consensus 69 llLgLlfDli~vaivk~~f~R~rP~~t~pS~l~~~t~DiYsFPsGHaSRaamv~~~~l~~a~~a~Plyv~l~~~walvvg 148 (189)
T KOG4268|consen 69 LLLGLLFDLITVAIVKKLFKRRRPYETSPSLLDYLTMDIYSFPSGHASRAAMVSKFFLSHAVLAVPLYVLLLVLWALVVG 148 (189)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcccCCHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHH
Confidence 345556666777899999998887764444332 345999999988776655443333333344443 678999999
Q ss_pred hcccchhhhhhhhhHHHHHHhhcCCCCCCCCCCCCccccCC-CChhHHHHHHHHHHHHHH
Q 030450 113 YDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAF 171 (177)
Q Consensus 113 yDA~GVRr~aG~qA~~lN~L~~~~~~~~~~~~~~~lre~lG-Htp~EVl~GallGivia~ 171 (177)
.+ |..+| |+..||++|+.+|++=+.
T Consensus 149 lS----------------------------------Rv~lGRHyvtDVlaG~fiGylear 174 (189)
T KOG4268|consen 149 LS----------------------------------RVMLGRHYVTDVLAGFFIGYLEAR 174 (189)
T ss_pred HH----------------------------------HHHHhhHHHHHHHHHHHHHHHHHH
Confidence 88 89999 999999999999998764
No 36
>PF14378 PAP2_3: PAP2 superfamily
Probab=97.12 E-value=0.0011 Score=53.63 Aligned_cols=62 Identities=23% Similarity=0.297 Sum_probs=43.8
Q ss_pred CCCchhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHhhcccchhhhhhhhhHHHHHHhhcCCCCCCCCCCCCccccCC
Q 030450 74 GMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLG 153 (177)
Q Consensus 74 GMPSSHSA~v~aLat~igl~~G~~s~~Faia~v~A~IVmyDA~GVRr~aG~qA~~lN~L~~~~~~~~~~~~~~~lre~lG 153 (177)
.|||-|.+...-.+..+.- .+.....+.+..+++.+++.+ -.+.|
T Consensus 127 afPSlH~a~a~l~~~~~~~-~~~~~~~~~~~~~~~~~i~~s----------------------------------tv~~~ 171 (191)
T PF14378_consen 127 AFPSLHVAWAVLCALALWR-VGRPRWLRALFLAFNVLILFS----------------------------------TVYTG 171 (191)
T ss_pred ccCchHHHHHHHHHHHHHH-ccccHHHHHHHHHHHHHHHHH----------------------------------HHHhC
Confidence 6999999986644444432 333333345677788777776 35667
Q ss_pred -CChhHHHHHHHHHHHHH
Q 030450 154 -HTPLQVVAGGILGCVVA 170 (177)
Q Consensus 154 -Htp~EVl~GallGivia 170 (177)
|+..|+++|++++.++-
T Consensus 172 ~HY~iDv~aG~~la~~~~ 189 (191)
T PF14378_consen 172 QHYVIDVIAGAALALLAI 189 (191)
T ss_pred cHHHHHHHHHHHHHHHHH
Confidence 99999999999988753
No 37
>PF14360 PAP2_C: PAP2 superfamily C-terminal
Probab=90.50 E-value=0.97 Score=32.16 Aligned_cols=18 Identities=22% Similarity=0.222 Sum_probs=15.4
Q ss_pred CCChhHHHHHHHHHHHHH
Q 030450 153 GHTPLQVVAGGILGCVVA 170 (177)
Q Consensus 153 GHtp~EVl~GallGivia 170 (177)
.|+-.||+.|..+...+=
T Consensus 52 ~HYTvDV~~a~~it~~~f 69 (74)
T PF14360_consen 52 KHYTVDVVLAYYITSLVF 69 (74)
T ss_pred CCceeehhhHHHHHHHHH
Confidence 499999999998887664
No 38
>COG4129 Predicted membrane protein [Function unknown]
Probab=77.82 E-value=3.2 Score=37.61 Aligned_cols=65 Identities=25% Similarity=0.343 Sum_probs=46.2
Q ss_pred CCCchhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHhhcccchhhhhhhhhHHHHHHhhcCCCCCCCCCCCCccccCC
Q 030450 74 GMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLG 153 (177)
Q Consensus 74 GMPSSHSA~v~aLat~igl~~G~~s~~Faia~v~A~IVmyDA~GVRr~aG~qA~~lN~L~~~~~~~~~~~~~~~lre~lG 153 (177)
|++.-+++..++||..++-..|.+.|.|| .+-| +++-..+ +..-.
T Consensus 10 g~RtlKt~ia~~La~~ia~~l~~~~~~~A--~i~A-V~~l~~t--------------------------------~~~s~ 54 (332)
T COG4129 10 GARTLKTGLAAGLALLIAHLLGLPQPAFA--GISA-VLCLSPT--------------------------------IKRSL 54 (332)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCchHHH--HHHH-hhcccCc--------------------------------chHHH
Confidence 67788999999999999999999888776 2333 3332210 22334
Q ss_pred CChhHHHHHHHHHHHHHHhh
Q 030450 154 HTPLQVVAGGILGCVVAFLM 173 (177)
Q Consensus 154 Htp~EVl~GallGivia~i~ 173 (177)
|+-.|-+.|..+|+++|.++
T Consensus 55 ~~~~~r~~g~~iG~~~a~l~ 74 (332)
T COG4129 55 KRALQRLLGNALGAILAVLF 74 (332)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 67788888888888888764
No 39
>COG4803 Predicted membrane protein [Function unknown]
Probab=51.01 E-value=11 Score=31.44 Aligned_cols=32 Identities=25% Similarity=0.426 Sum_probs=27.2
Q ss_pred CCCccccCCCChhHHHHHHHHHHHHHHhhccC
Q 030450 145 VRPLRELLGHTPLQVVAGGILGCVVAFLMRNS 176 (177)
Q Consensus 145 ~~~lre~lGHtp~EVl~GallGivia~i~~~~ 176 (177)
+.++|....-|-.-.+.|+++|.++|++|+|.
T Consensus 48 kvklkQ~~Nlt~aGa~sGafWG~LiGllFl~P 79 (170)
T COG4803 48 KVKLKQLMNLTGAGAVSGAFWGMLIGLLFLNP 79 (170)
T ss_pred CeeHHHHhhhhhhccccccHHHHHHHHHHHhH
Confidence 45678888888888899999999999999873
No 40
>TIGR00827 EIIC-GAT PTS system, galactitol-specific IIC component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains. The only characterized member of this family of PTS transporters is the E. coli galactitol transporter. Gat family PTS systems typically have 3 components: IIA, IIB and IIC. This family is specific for the IIC component of the PTS Gat family.
Probab=50.13 E-value=16 Score=34.29 Aligned_cols=47 Identities=19% Similarity=0.311 Sum_probs=33.3
Q ss_pred HHHHHHhhcCCCCCC-CCCCCCccccCCCChhHHHHHHHHHHHHHHhh
Q 030450 127 ELLNQIVCEFPPDHP-LSSVRPLRELLGHTPLQVVAGGILGCVVAFLM 173 (177)
Q Consensus 127 ~~lN~L~~~~~~~~~-~~~~~~lre~lGHtp~EVl~GallGivia~i~ 173 (177)
-.+|++.++++.-++ +.+.+++|+..|=----.+-|.++|+++|++-
T Consensus 184 ~~~n~i~dkIPglnki~~d~~~i~kk~GifGep~viG~iiG~~lGila 231 (407)
T TIGR00827 184 VLVDAIIEKIPGIKHWNADADTIQRRFGIFGEPVFIGLVLGLIIGLLA 231 (407)
T ss_pred HHHHHHHHhCcCcccCCCCHHHHhhhheeccchHHHHHHHHHHHHHHh
Confidence 478999998854322 33456789999955555788899998888653
No 41
>PRK11660 putative transporter; Provisional
Probab=49.73 E-value=57 Score=31.07 Aligned_cols=46 Identities=13% Similarity=0.177 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccccccc-ccc----------cCCCCchhHHHHHHH
Q 030450 41 SAFLAFALAQFLKIFTTWYKEKRWDSKK-MLD----------SGGMPSSHSATVSAL 86 (177)
Q Consensus 41 sal~a~~~AQ~iK~~i~~lr~~~~d~~~-l~~----------sGGMPSSHSA~v~aL 86 (177)
.++++...+-+....++....++.|..+ ++. .||||.+++-.-+++
T Consensus 288 iaiv~~iesl~~~~~~~~~~~~~~d~n~EL~a~G~aNi~~~~fgg~p~~~s~srSa~ 344 (568)
T PRK11660 288 MAMLGAIESLLCAVVLDGMTGTKHSANSELVGQGLGNIVAPFFGGITATAAIARSAA 344 (568)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHhHHHHHHHHhCcccccchHHHHHH
Confidence 3444444444445555555555556543 332 569999987444433
No 42
>PF14362 DUF4407: Domain of unknown function (DUF4407)
Probab=46.26 E-value=96 Score=26.81 Aligned_cols=35 Identities=26% Similarity=0.261 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHhCCCch-HHH--HHHHHHH-HHhhc
Q 030450 80 SATVSALAVAIGLQEGSGSP-SFA--IAVVLAC-IVMYD 114 (177)
Q Consensus 80 SA~v~aLat~igl~~G~~s~-~Fa--ia~v~A~-IVmyD 114 (177)
++.+.+++.+.++...++.+ +.+ ++++|++ |.++|
T Consensus 25 ta~la~~s~~~a~~~~~~~~~~~ai~~glvwgl~I~~lD 63 (301)
T PF14362_consen 25 TALLAGLSGGYALYTVFGGPVWAAIPFGLVWGLVIFNLD 63 (301)
T ss_pred HHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence 34455555556666666655 333 4566765 66677
No 43
>TIGR00815 sulP high affinity sulphate transporter 1. (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
Probab=41.88 E-value=61 Score=30.75 Aligned_cols=51 Identities=10% Similarity=0.102 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccccccc-ccc----------cCCCCchhHHHHHHHHHH
Q 030450 39 LISAFLAFALAQFLKIFTTWYKEKRWDSKK-MLD----------SGGMPSSHSATVSALAVA 89 (177)
Q Consensus 39 l~sal~a~~~AQ~iK~~i~~lr~~~~d~~~-l~~----------sGGMPSSHSA~v~aLat~ 89 (177)
+..++++.+-+-.+=..+......+.|..+ ++. -||||.+|+..-+++...
T Consensus 266 ~~ia~v~~~e~l~~a~~~~~~~~~~~d~n~El~a~G~~N~~~~~fg~~p~~~s~srs~~~~~ 327 (563)
T TIGR00815 266 IAIAIVGLIESIAIARSFARMTGYKIDANQELVAQGIANIVGSFFSCYPATGSLSRTAVNAK 327 (563)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHhhHHHHHHHHhCccCCCCcchHHHHHHh
Confidence 444445544443322233333444566553 332 459999998766544333
No 44
>PF06081 DUF939: Bacterial protein of unknown function (DUF939); InterPro: IPR010343 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=41.83 E-value=35 Score=26.74 Aligned_cols=34 Identities=29% Similarity=0.300 Sum_probs=22.8
Q ss_pred hHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHhhc
Q 030450 79 HSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYD 114 (177)
Q Consensus 79 HSA~v~aLat~igl~~G~~s~~Faia~v~A~IVmyD 114 (177)
-++..++++..++-..+.+.|.++ .+-|.+.+.+
T Consensus 9 KtaiA~~la~~ia~~l~~~~~~~A--~i~Ail~~q~ 42 (141)
T PF06081_consen 9 KTAIAAFLAILIAQLLGLQYPFFA--PIAAILSMQP 42 (141)
T ss_pred HHHHHHHHHHHHHHHHCCCchHHH--HHHHhheeeh
Confidence 456677777777777777766554 5566666765
No 45
>PF10261 Scs3p: Inositol phospholipid synthesis and fat-storage-inducing TM; InterPro: IPR019388 This entry represents the fat storage-inducing transmembrane (FIT) family of proteins, which play an important role in lipid droplet accumulation. They are endoplasmic reticulum resident membrane proteins that induce lipid droplet accumulation in cell culture and when expressed in mouse liver []; they mediate the partitioning of triglyceride from the ER into cytosolic fatty droplets by an as-yet undetermined mechanism. The FIT family of proteins are not involved in triglyceride biosynthesis []. FIT1 and FIT2 proteins are six-transmembrane-domain containing proteins with both the N and C termini residing in the cytosol. FIT2 is the more anciently conserved homologue of the FIT family; this family of proteins do not share sequence similarity to known proteins or domains.
Probab=40.98 E-value=19 Score=30.84 Aligned_cols=21 Identities=24% Similarity=0.419 Sum_probs=19.0
Q ss_pred CChhHHHHHHHHHHHHHHhhc
Q 030450 154 HTPLQVVAGGILGCVVAFLMR 174 (177)
Q Consensus 154 Htp~EVl~GallGivia~i~~ 174 (177)
||+.|=+.|.++|.++-++.|
T Consensus 218 HT~~EKl~Gl~~g~~~~~~~Y 238 (238)
T PF10261_consen 218 HTILEKLSGLLFGYLGWYITY 238 (238)
T ss_pred CCHHHHHHHHHHHHHhheeeC
Confidence 999999999999999887766
No 46
>PF01219 DAGK_prokar: Prokaryotic diacylglycerol kinase; InterPro: IPR000829 Diacylglycerol kinase (2.7.1.107 from EC) (DAGK) is an enzyme that catalyses the formation of phosphatidic acid from diacylglycerol and ATP, an important step in phospholipid biosynthesis. In bacteria DAGK is very small (13 to 15 kD) membrane protein which seems to contain three transmembrane domains []. The best conserved region, is a stretch of 12 residues which are located in a cytoplasmic loop between the second and third transmembrane domains.; GO: 0004143 diacylglycerol kinase activity, 0008654 phospholipid biosynthetic process, 0016020 membrane; PDB: 2KDC_B.
Probab=38.15 E-value=88 Score=23.70 Aligned_cols=44 Identities=20% Similarity=0.287 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHhCCCchHHHHHHHHHHHHhhcccchhhhhhhhhHHHHHHhhcCC
Q 030450 82 TVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFP 137 (177)
Q Consensus 82 ~v~aLat~igl~~G~~s~~Faia~v~A~IVmyDA~GVRr~aG~qA~~lN~L~~~~~ 137 (177)
....+....++..|.+...+.+...-...|+ -+|.+|.-+|.+-
T Consensus 23 ~~~~~v~~~~~~l~~s~~ew~~li~~~~~Vl------------~~EllNTAIE~~v 66 (104)
T PF01219_consen 23 VAAVLVLIAAFFLGLSPWEWALLILAIFLVL------------IAELLNTAIERLV 66 (104)
T ss_dssp HHHHHHHHHHHH-----SHHHHHHHHHHHHH------------HHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHHHH------------HHHHHHHHHHHHH
Confidence 3456667778888888777775544444444 3699999999764
No 47
>COG0472 Rfe UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase [Cell envelope biogenesis, outer membrane]
Probab=38.13 E-value=1.1e+02 Score=27.31 Aligned_cols=25 Identities=24% Similarity=0.410 Sum_probs=22.4
Q ss_pred CCChhHHHHHHHHHHHHHHhhccCC
Q 030450 153 GHTPLQVVAGGILGCVVAFLMRNSN 177 (177)
Q Consensus 153 GHtp~EVl~GallGivia~i~~~~~ 177 (177)
||....+++.+++|...|+++||.+
T Consensus 186 ~~~~~~~~~~al~ga~LGFL~~N~~ 210 (319)
T COG0472 186 GLGELALICAALAGACLGFLWFNFY 210 (319)
T ss_pred cchhHHHHHHHHHHHHHHHHHhcCC
Confidence 5888999999999999999999974
No 48
>PF11522 Pik1: Yeast phosphatidylinositol-4-OH kinase Pik1; InterPro: IPR021601 Pik1 is a regulator of membrane traffic and participates in the mating-pheromone signal-transduction cascade. The protein is localised to the nucleus and cytoplasm in the Golgi. Pik1 is thought to have an actin-independent role in membrane transport []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 2JU0_B.
Probab=35.67 E-value=45 Score=22.72 Aligned_cols=38 Identities=18% Similarity=0.308 Sum_probs=20.6
Q ss_pred HHHHHhhcCCCCC--CCCCCCCccccCCCChhHHHHHHHHHH
Q 030450 128 LLNQIVCEFPPDH--PLSSVRPLRELLGHTPLQVVAGGILGC 167 (177)
Q Consensus 128 ~lN~L~~~~~~~~--~~~~~~~lre~lGHtp~EVl~GallGi 167 (177)
++|++-.-+-... +....++.||.+ .|.=|++|++++-
T Consensus 10 v~NklQ~ilFn~~~~~~~~~~k~~ENv--~PalVL~s~v~as 49 (51)
T PF11522_consen 10 VINKLQHILFNTSSSDISKQQKFRENV--LPALVLCSAVLAS 49 (51)
T ss_dssp HHHHHT--SS-SS-----TT--SS-SH--HHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCcccccccccccccc--chHHHHHHHHHHh
Confidence 7888876664433 333344556654 7889999998864
No 49
>TIGR02005 PTS-IIBC-alpha PTS system, alpha-glucoside-specific IIBC component. This model represents a family of fused PTS enzyme II B and C domains. A gene from Clostridium has been partially characterized as a maltose transporter, while genes from Fusobacterium and Klebsiella have been proposed to transport the five non-standard isomers of sucrose.
Probab=35.24 E-value=1.7e+02 Score=28.27 Aligned_cols=89 Identities=13% Similarity=0.280 Sum_probs=48.6
Q ss_pred cCCCCchhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHhhcccchhhhhhhhhHHHHHHhhcCCCCCC--CC--C---
Q 030450 72 SGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHP--LS--S--- 144 (177)
Q Consensus 72 sGGMPSSHSA~v~aLat~igl~~G~~s~~Faia~v~A~IVmyDA~GVRr~aG~qA~~lN~L~~~~~~~~~--~~--~--- 144 (177)
.|+..=..=...+|+..++|+... +...-+++.+++.+++.-+ +|.+.+......+ .. .
T Consensus 57 ~g~~if~nLpllFAvgia~Glak~-~kg~Aalaa~v~ylv~~~~-------------~~~~l~~~~~~~~~~~~~~~~~~ 122 (524)
T TIGR02005 57 GGWTVFRQMPLIFVVGLPIGLAKK-AQGRACLAALMGYLTFNYF-------------INAILTQWGSSFGVNFTQGVGVG 122 (524)
T ss_pred hHHHHHhcchHHHHHHHHHHhccC-CcHHHHHHHHHHHHHHHHH-------------HHHHHHhcccccccchhhhcccc
Confidence 333334445577888888888754 3445567777787777652 3333321110000 00 0
Q ss_pred CCCccccCC-CC-hhHHHHHHHHHHHHHHhhc
Q 030450 145 VRPLRELLG-HT-PLQVVAGGILGCVVAFLMR 174 (177)
Q Consensus 145 ~~~lre~lG-Ht-p~EVl~GallGivia~i~~ 174 (177)
..-..+.+| .| -.-|++|+++|++++++..
T Consensus 123 ~~~~~~vlGi~tl~~gVfgGIi~G~i~a~l~N 154 (524)
T TIGR02005 123 VSGLTSIAGIKTLDTSIIGAIIISGIITYIHN 154 (524)
T ss_pred ccchhhhcccceecchhHHHHHHHHHHHHHHH
Confidence 000123355 22 2239999999999998754
No 50
>PF10066 DUF2304: Uncharacterized conserved protein (DUF2304); InterPro: IPR019277 This entry represents hypothetical archaeal and bacterial proteins that have no known function.
Probab=34.61 E-value=50 Score=24.99 Aligned_cols=51 Identities=12% Similarity=0.323 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHhCCCchHHHHHHHHHHHHhhcccchhhhhhhhhHHHHHHhhcC
Q 030450 82 TVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEF 136 (177)
Q Consensus 82 ~v~aLat~igl~~G~~s~~Faia~v~A~IVmyDA~GVRr~aG~qA~~lN~L~~~~ 136 (177)
...-+|..+|+.+|-| -.|.++.++-+++++. .=....+|.+-+++|.+++
T Consensus 52 ~~~~vA~~lGi~~~~n-~lf~~~i~~ll~~~~~---l~~~is~le~~i~~L~qei 102 (115)
T PF10066_consen 52 ILDWVAKLLGIGRPPN-LLFYLGILFLLVIIFS---LYVRISRLEEKIKRLAQEI 102 (115)
T ss_pred HHHHHHHHHCCCchhH-HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH
Confidence 4455566666666633 3455555555555554 2344567778888888877
No 51
>PF04632 FUSC: Fusaric acid resistance protein family; InterPro: IPR006726 This entry represents the p-hydroxybenzoic acid efflux pump subunit AaeB (pHBA efflux pump protein B) whose substrates are p-hydroxybenzoic acid (pHBA), 6-hydroxy-2-naphthoic and 2-hydroxycinnamate. It could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell []. This family also includes fusaric acid resistance proteins [], which are likely to be membrane transporter proteins, and uncharacterised transporter YdhK.; GO: 0006810 transport, 0005886 plasma membrane
Probab=33.08 E-value=1.1e+02 Score=28.84 Aligned_cols=33 Identities=24% Similarity=0.197 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHhhc
Q 030450 80 SATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYD 114 (177)
Q Consensus 80 SA~v~aLat~igl~~G~~s~~Faia~v~A~IVmyD 114 (177)
.+..+.+|..+++..+.+.|+++. +-.+||+.-
T Consensus 8 ~~lA~~lAl~ia~~l~l~~p~WA~--~tv~iV~qp 40 (650)
T PF04632_consen 8 TALAAMLALYIAFWLQLPHPYWAA--MTVFIVSQP 40 (650)
T ss_pred HHHHHHHHHHHHHHhCCCCcHHHH--HHHHhhccC
Confidence 356677888889999999998874 334455643
No 52
>PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related. These proteins are: Neurospora crassa sulphate permease II (gene cys-14). Yeast sulphate permeases (genes SUL1 and SUL2). Rat sulphate anion transporter 1 (SAT-1). Mammalian DTDST, a probable sulphate transporter which, in human, is involved in the genetic disease, diastrophic dysplasia (DTD). Sulphate transporters 1, 2 and 3 from the legume Stylosanthes hamata. Human pendrin (gene PDS), which is involved in a number of hearing loss genetic diseases. Human protein DRA (Down-Regulated in Adenoma). Soybean early nodulin 70. Escherichia coli hypothetical protein ychM. Caenorhabditis elegans hypothetical protein F41D9.5. These proteins are highly hydrophobic and seem to contain about 12 transmembrane domains.; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=31.18 E-value=1.5e+02 Score=24.71 Aligned_cols=25 Identities=36% Similarity=0.404 Sum_probs=16.5
Q ss_pred cCCCCchhHHHHHHHHHHHHHHhCC
Q 030450 72 SGGMPSSHSATVSALAVAIGLQEGS 96 (177)
Q Consensus 72 sGGMPSSHSA~v~aLat~igl~~G~ 96 (177)
.||||.+++-.-+++....|-....
T Consensus 198 ~gg~p~~~s~srs~~~~~~Ga~t~~ 222 (280)
T PF00916_consen 198 FGGMPGSGSFSRSAVNYRAGARTRL 222 (280)
T ss_pred hcccccccccccchHHHhcCcceee
Confidence 5699999987766555554444443
No 53
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=30.06 E-value=49 Score=26.14 Aligned_cols=19 Identities=16% Similarity=0.483 Sum_probs=16.0
Q ss_pred ChhHHHHHHHHHHHHHHhh
Q 030450 155 TPLQVVAGGILGCVVAFLM 173 (177)
Q Consensus 155 tp~EVl~GallGivia~i~ 173 (177)
--.|-++|.++|..+||+.
T Consensus 48 lssefIsGilVGa~iG~ll 66 (116)
T COG5336 48 LSSEFISGILVGAGIGWLL 66 (116)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3479999999999999874
No 54
>COG4575 ElaB Uncharacterized conserved protein [Function unknown]
Probab=28.48 E-value=46 Score=25.86 Aligned_cols=26 Identities=12% Similarity=0.218 Sum_probs=20.8
Q ss_pred cccCC-CChhHHHHHHHHHHHHHHhhc
Q 030450 149 RELLG-HTPLQVVAGGILGCVVAFLMR 174 (177)
Q Consensus 149 re~lG-Htp~EVl~GallGivia~i~~ 174 (177)
-+|++ |-+-=|=+|+.+|+++|+++-
T Consensus 76 D~yV~e~PWq~VGvaAaVGlllGlLls 102 (104)
T COG4575 76 DDYVRENPWQGVGVAAAVGLLLGLLLS 102 (104)
T ss_pred HHHHHcCCchHHHHHHHHHHHHHHHHh
Confidence 47888 666667789999999998874
No 55
>PF03611 EIIC-GAT: PTS system sugar-specific permease component; InterPro: IPR004703 This entry represents bacterial transmembrane proteins with a putative sugar-specific permease function, including the IIC component of the PTS system. It has been suggested that this permease may form part of an L-ascorbate utilisation pathway, with proposed specificity for 3-keto-L-gulonate (formed by hydrolysis of L-ascorbate) []. This family includes the IIC component of the galactitol specific GAT family PTS system.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane
Probab=26.45 E-value=58 Score=30.27 Aligned_cols=48 Identities=23% Similarity=0.318 Sum_probs=32.6
Q ss_pred hHHHHHHhhcC-CC-CCCCCCCCCccccCCCChhHHHHHHHHHHHHHHhh
Q 030450 126 AELLNQIVCEF-PP-DHPLSSVRPLRELLGHTPLQVVAGGILGCVVAFLM 173 (177)
Q Consensus 126 A~~lN~L~~~~-~~-~~~~~~~~~lre~lGHtp~EVl~GallGivia~i~ 173 (177)
+-.+|.+++++ ++ ++...|.+++++.+|=----.+.|+++|++++++.
T Consensus 187 ~~~l~~~i~ki~~~~~k~~~e~~~l~k~lg~~~d~~v~g~iig~ii~ii~ 236 (415)
T PF03611_consen 187 AYWLNWLIGKIFPGKNKISAEPEKLPKKLGFFGDPMVIGFIIGLIIGIIA 236 (415)
T ss_pred HHHHHHHHHhhcCCCCCCCCCHHHHhhhhhHhcCcHHHHHHHHHHHHHHH
Confidence 45888888888 44 33244556788888833344677888888877654
No 56
>PF00953 Glycos_transf_4: Glycosyl transferase family 4; InterPro: IPR000715 This entry represents a family of UDP-GlcNAc/MurNAc: polyisoprenol-P GlcNAc/MurNAc-1-P transferases. Members of the family include eukaryotic N-acetylglucosamine-1-phosphate transferases, which catalyse the conversion of UDP-N-acteyl-D-glucosamine and dolichyl phosphate to UMP and N-acetyl-D-glucosaminyl-diphosphodolichol in the glycosylation pathway; and bacterial phospho-N-acetylmuramoyl-pentapeptide-transferases, which catalyse the first step of the lipid cycle reactions in the biosynthesis of cell wall peptidoglycan.; GO: 0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity, 0016021 integral to membrane
Probab=23.80 E-value=3.1e+02 Score=21.58 Aligned_cols=23 Identities=26% Similarity=0.546 Sum_probs=10.2
Q ss_pred CCChhHHHHHHHHHHHHHHhhcc
Q 030450 153 GHTPLQVVAGGILGCVVAFLMRN 175 (177)
Q Consensus 153 GHtp~EVl~GallGivia~i~~~ 175 (177)
||++.-.+.-+++|.++++++||
T Consensus 109 ~~~~~~~~~~~l~~a~lgfl~~N 131 (159)
T PF00953_consen 109 GNYELAILCLALAGALLGFLIFN 131 (159)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444444444
No 57
>PF04632 FUSC: Fusaric acid resistance protein family; InterPro: IPR006726 This entry represents the p-hydroxybenzoic acid efflux pump subunit AaeB (pHBA efflux pump protein B) whose substrates are p-hydroxybenzoic acid (pHBA), 6-hydroxy-2-naphthoic and 2-hydroxycinnamate. It could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell []. This family also includes fusaric acid resistance proteins [], which are likely to be membrane transporter proteins, and uncharacterised transporter YdhK.; GO: 0006810 transport, 0005886 plasma membrane
Probab=23.58 E-value=2.3e+02 Score=26.70 Aligned_cols=21 Identities=33% Similarity=0.504 Sum_probs=15.4
Q ss_pred CChhHHHHHHHHHHHHHHhhc
Q 030450 154 HTPLQVVAGGILGCVVAFLMR 174 (177)
Q Consensus 154 Htp~EVl~GallGivia~i~~ 174 (177)
+....++.|+++|.++|++++
T Consensus 387 ~~~~~~~~G~l~~~~~a~~~~ 407 (650)
T PF04632_consen 387 PALRLFLIGALLGAVLAFLYL 407 (650)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 455778888888888877543
No 58
>PRK14654 mraY phospho-N-acetylmuramoyl-pentapeptide-transferase; Provisional
Probab=22.79 E-value=3.8e+02 Score=23.84 Aligned_cols=25 Identities=24% Similarity=0.100 Sum_probs=20.5
Q ss_pred CCChhHHHHHHHHHHHHHHhhccCC
Q 030450 153 GHTPLQVVAGGILGCVVAFLMRNSN 177 (177)
Q Consensus 153 GHtp~EVl~GallGivia~i~~~~~ 177 (177)
++...+.++.++.|.+.|+++||..
T Consensus 176 ~~~~~~~~~~~l~gallGFL~~N~~ 200 (302)
T PRK14654 176 ERGVSEDILLILGAGVLAFLVFNSK 200 (302)
T ss_pred cccHHHHHHHHHHHHHHHHHhhcCC
Confidence 5666677888999999999999963
No 59
>KOG4505 consensus Na+/H+ antiporter [Inorganic ion transport and metabolism]
Probab=22.14 E-value=73 Score=30.13 Aligned_cols=18 Identities=33% Similarity=0.767 Sum_probs=15.8
Q ss_pred hhHHHHHHHHHHHHHHhh
Q 030450 156 PLQVVAGGILGCVVAFLM 173 (177)
Q Consensus 156 p~EVl~GallGivia~i~ 173 (177)
..|++.|+++|.++|++-
T Consensus 209 Lyec~fg~llG~vIG~l~ 226 (467)
T KOG4505|consen 209 LYECFFGCLLGCVIGYLS 226 (467)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 369999999999999874
No 60
>TIGR02872 spore_ytvI sporulation integral membrane protein YtvI. Three lines of evidence show this protein to be involved in sporulation. First, it is under control of a sporulation-specific sigma factor, sigma-E. Second, mutation leads to a sporulation defect. Third, it if found in exactly those genomes whose bacteria are capable of sporulation, except for being absent in Clostridium acetobutylicum ATCC824. This protein has extensive hydrophobic regions and is likely an integral membrane protein.
Probab=21.53 E-value=5e+02 Score=21.98 Aligned_cols=39 Identities=15% Similarity=0.199 Sum_probs=26.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccCCCCchhHHHHH
Q 030450 36 NLPLISAFLAFALAQFLKIFTTWYKEKRWDSKKMLDSGGMPSSHSATVS 84 (177)
Q Consensus 36 N~~l~sal~a~~~AQ~iK~~i~~lr~~~~d~~~l~~sGGMPSSHSA~v~ 84 (177)
-+.+..-++|.+++=++.++.++++.|. |+|+.-++..+
T Consensus 20 ~p~l~p~l~A~vla~ll~pl~~~L~~~~----------~~~r~la~~l~ 58 (341)
T TIGR02872 20 LPYSLPFVIALILALILEPMVRFLEKKL----------KLPRALAVFIV 58 (341)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHc----------CCchHHHHHHH
Confidence 3455666677888888888888876432 46766666554
No 61
>COG3775 GatC Phosphotransferase system, galactitol-specific IIC component [Carbohydrate transport and metabolism]
Probab=21.16 E-value=80 Score=30.12 Aligned_cols=45 Identities=22% Similarity=0.325 Sum_probs=33.1
Q ss_pred HHHHHhhcCCCCCC-CCCCCCccccCCCChhHHHHHHHHHHHHHHh
Q 030450 128 LLNQIVCEFPPDHP-LSSVRPLRELLGHTPLQVVAGGILGCVVAFL 172 (177)
Q Consensus 128 ~lN~L~~~~~~~~~-~~~~~~lre~lGHtp~EVl~GallGivia~i 172 (177)
.+++++++++.-+. ..+.++++...|-.-.-++.|.++|+++|.+
T Consensus 195 ~~dkii~KiPgl~k~~~Da~~iqkk~G~fGep~~iG~ilG~~iGil 240 (446)
T COG3775 195 LLDKIIEKIPGLNKIDFDAETIQKKFGIFGEPMFIGFILGLLIGIL 240 (446)
T ss_pred hHHHHHHhCcCccccCCCHHHHHhhhcCccchhHHHHHHHHHHHHH
Confidence 57788888764332 2344567888897777789999999999875
No 62
>PF01034 Syndecan: Syndecan domain; InterPro: IPR001050 The syndecans are transmembrane proteoglycans which are involved in the organisation of cytoskeleton and/or actin microfilaments, and have important roles as cell surface receptors during cell-cell and/or cell-matrix interactions [, ]. Structurally, these proteins consist of four separate domains: A signal sequence; An extracellular domain (ectodomain) of variable length whose sequence is not evolutionary conserved in the various forms of syndecans. The ectodomain contains the sites of attachment of the heparan sulphate glycosaminoglycan side chains; A transmembrane region; A highly conserved cytoplasmic domain of about 30 to 35 residues, which could interact with cytoskeletal proteins. The proteins known to belong to this family are: Syndecan 1. Syndecan 2 or fibroglycan. Syndecan 3 or neuroglycan or N-syndecan. Syndecan 4 or amphiglycan or ryudocan. Drosophila syndecan. Caenorhabditis elegans probable syndecan (F57C7.3). Syndecan-4, a transmembrane heparan sulphate proteoglycan, is a coreceptor with integrins in cell adhesion. It has been suggested to form a ternary signalling complex with protein kinase Calpha and phosphatidylinositol 4,5-bisphosphate (PIP2). Structural studies have demonstrated that the cytoplasmic domain undergoes a conformational transition and forms a symmetric dimer in the presence of phospholipid activator PIP2, and whose overall structure in solution exhibits a twisted clamp shape having a cavity in the centre of dimeric interface. In addition, it has been observed that the syndecan-4 variable domain interacts, strongly, not only with fatty acyl groups but also the anionic head group of PIP2. These findings indicate that PIP2 promotes oligomerisation of the syndecan-4 cytoplasmic domain for transmembrane signalling and cell-matrix adhesion [, ].; GO: 0008092 cytoskeletal protein binding, 0016020 membrane; PDB: 1EJQ_B 1EJP_B 1YBO_C 1OBY_Q.
Probab=20.55 E-value=33 Score=24.45 Aligned_cols=13 Identities=46% Similarity=0.544 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHH
Q 030450 158 QVVAGGILGCVVA 170 (177)
Q Consensus 158 EVl~GallGivia 170 (177)
||++|.+.|.++|
T Consensus 9 ~vlaavIaG~Vvg 21 (64)
T PF01034_consen 9 EVLAAVIAGGVVG 21 (64)
T ss_dssp -------------
T ss_pred hHHHHHHHHHHHH
Confidence 4455555554444
Done!