BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 030452
         (177 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q5G234|P2OX_TRAPU Pyranose 2-oxidase OS=Trametes pubescens GN=p2ox PE=1 SV=1
          Length = 622

 Score = 31.6 bits (70), Expect = 3.1,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 21/34 (61%)

Query: 124 VEPAVFLSLYGINKKKFNKEACNCCSDTIKAIYG 157
           +EP + L L G ++  F+++  NCC DT   ++G
Sbjct: 541 MEPGLVLHLGGTHRMGFDEQEDNCCVDTDSRVFG 574


>sp|Q68RJ7|ACH92_ONCMY Neuronal acetylcholine receptor subunit alpha-9-II OS=Oncorhynchus
           mykiss PE=2 SV=1
          Length = 550

 Score = 31.2 bits (69), Expect = 3.3,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 24/52 (46%)

Query: 21  PQRRAKKLKKPNTKQNNKNSTSTSSSVGFGIEKMEPLWRCVQGCGACCKLDK 72
           PQR  K   + +  ++ KN  S+S   GF   +  PL  C +    CC  D+
Sbjct: 411 PQRHPKPRHQHHITRDEKNHLSSSKYEGFESNRNLPLGDCCKEAPPCCPEDE 462


>sp|P59097|P2OX_TRAHI Pyranose 2-oxidase OS=Trametes hirsuta GN=P2OX PE=1 SV=1
          Length = 622

 Score = 30.8 bits (68), Expect = 5.1,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 23/37 (62%)

Query: 124 VEPAVFLSLYGINKKKFNKEACNCCSDTIKAIYGSRS 160
           +EP + L L G ++  F+++A  CC DT   ++G ++
Sbjct: 539 MEPGLVLHLGGTHRMGFDEKADKCCVDTDSRVFGFKN 575


>sp|Q6UG02|P2OX_PHLGI Pyranose 2-oxidase OS=Phlebiopsis gigantea GN=p2ox PE=1 SV=1
          Length = 622

 Score = 30.8 bits (68), Expect = 5.1,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 23/37 (62%)

Query: 124 VEPAVFLSLYGINKKKFNKEACNCCSDTIKAIYGSRS 160
           +EP + L L G ++  F+++A  CC DT   ++G ++
Sbjct: 539 MEPGLVLHLGGTHRMGFDEKADKCCVDTDSRVFGFKN 575


>sp|Q10JL1|COBL5_ORYSJ COBRA-like protein 5 OS=Oryza sativa subsp. japonica GN=BC1 PE=2
           SV=1
          Length = 468

 Score = 30.4 bits (67), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 20/87 (22%)

Query: 87  SDVELYRSLIGPDGWCINYEKSTRK---------------CSIYPER-PYFCRVEPAVFL 130
           S+ ++YR ++ P GW + +  + ++               CS +    P+ C+  PA+  
Sbjct: 53  SNYQMYRQILAP-GWTVGWSWAKKEVIWSIVGAQATEQGDCSKFKGGIPHSCKRTPAIVD 111

Query: 131 SLYGINKKKFNKEACNCCSDTIKAIYG 157
            L G+    +N++  NCC   + + YG
Sbjct: 112 LLPGV---PYNQQIANCCKAGVVSAYG 135


>sp|A2XHZ9|COBL5_ORYSI COBRA-like protein 5 OS=Oryza sativa subsp. indica GN=BC1 PE=2 SV=1
          Length = 468

 Score = 30.4 bits (67), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 20/87 (22%)

Query: 87  SDVELYRSLIGPDGWCINYEKSTRK---------------CSIYPER-PYFCRVEPAVFL 130
           S+ ++YR ++ P GW + +  + ++               CS +    P+ C+  PA+  
Sbjct: 53  SNYQMYRQILAP-GWTVGWSWAKKEVIWSIVGAQATEQGDCSKFKGGIPHSCKRTPAIVD 111

Query: 131 SLYGINKKKFNKEACNCCSDTIKAIYG 157
            L G+    +N++  NCC   + + YG
Sbjct: 112 LLPGV---PYNQQIANCCKAGVVSAYG 135


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.319    0.133    0.422 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,269,211
Number of Sequences: 539616
Number of extensions: 2868619
Number of successful extensions: 6550
Number of sequences better than 100.0: 9
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 6545
Number of HSP's gapped (non-prelim): 9
length of query: 177
length of database: 191,569,459
effective HSP length: 110
effective length of query: 67
effective length of database: 132,211,699
effective search space: 8858183833
effective search space used: 8858183833
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)