Query 030454
Match_columns 177
No_of_seqs 162 out of 744
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 22:44:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030454.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030454hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2w2n_P Proprotein convertase s 99.5 5.6E-15 1.9E-19 111.6 6.2 77 81-163 37-113 (114)
2 2qtw_A Proprotein convertase s 99.2 6E-11 2.1E-15 91.1 7.6 77 81-163 47-123 (124)
3 3cnq_P Subtilisin BPN'; unclea 99.1 1.9E-10 6.5E-15 80.3 8.5 70 81-165 8-77 (80)
4 1v5i_B POIA1, IA-1=serine prot 98.4 1.3E-06 4.5E-11 61.0 8.6 70 82-163 3-75 (76)
5 2p4e_P Proprotein convertase s 97.9 1.7E-05 5.9E-10 75.7 6.9 76 82-163 76-151 (692)
6 3t41_A Epidermin leader peptid 96.9 0.0018 6.1E-08 57.3 6.7 76 71-165 34-110 (471)
7 3afg_A Subtilisin-like serine 95.9 0.0051 1.7E-07 56.4 4.1 44 121-165 60-114 (539)
8 2z30_B TK-subtilisin; thermoco 95.6 0.013 4.5E-07 39.3 4.2 42 119-161 21-62 (65)
9 2z2z_A TK-subtilisin precursor 95.6 0.0078 2.7E-07 52.5 3.5 43 121-164 24-66 (395)
10 3ftj_A MACB, macrolide export 30.1 28 0.00097 26.4 2.4 24 135-158 32-55 (226)
11 3e96_A Dihydrodipicolinate syn 29.1 1.5E+02 0.0052 24.7 7.0 49 96-157 120-168 (316)
12 3d0c_A Dihydrodipicolinate syn 25.3 1.6E+02 0.0055 24.5 6.5 48 96-156 120-167 (314)
13 2ofk_A 3-methyladenine DNA gly 24.4 12 0.00042 30.2 -0.7 29 125-153 54-86 (183)
14 2jg6_A DNA-3-methyladenine gly 22.5 15 0.0005 29.8 -0.6 29 125-153 54-86 (186)
No 1
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P
Probab=99.54 E-value=5.6e-15 Score=111.59 Aligned_cols=77 Identities=17% Similarity=0.122 Sum_probs=62.8
Q ss_pred ceEEEEEecCCCCCCCchHHHHHHHHHHHHHhhCChhhhhcceeEEecCcceeeeeecCHHHHHHhhCCCCeEEEeCCCC
Q 030454 81 YQHWLIVMEFPNPSELSEEEMINAYVKTLAAVVGSEEEAKKKIYSVCTTTYTGFGALIDEELSYKVKGQPGVLWVLPDSY 160 (177)
Q Consensus 81 ~ktYIV~M~~~~~~~~~~~~~~~~h~s~LaSVlgS~e~Ak~~IlYSYt~af~GFAA~LTeeEA~~Lk~~PGVlSVfPD~~ 160 (177)
.+.|||+|+.... ......|++|+.+++++ +.+...++|+|++.|+||+|+||++|+++|+++|+|+.|.||+.
T Consensus 37 p~~YIV~lk~~~~-----~~~~~~h~~~l~s~~~~-~~~~~~i~~sY~~~~~GFaa~Lt~~~~~~L~~~P~V~~VE~D~~ 110 (114)
T 2w2n_P 37 PGTYVVVLKEETH-----LSQSERTARRLQAQAAR-RGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSS 110 (114)
T ss_dssp EEEEEEEECTTCC-----HHHHHHHHHHHHHHHHH-TTCCCEEEEEECSSSSEEEEECCGGGHHHHHTSTTEEEEEEEEE
T ss_pred CCcEEEEECCCCC-----HHHHHHHHHHHHHHhhh-cccCCceEEEecccceEEEEEcCHHHHHHHHcCCCccEEEeCce
Confidence 4799999975432 24456788888887653 22456799999999999999999999999999999999999987
Q ss_pred ccC
Q 030454 161 IDV 163 (177)
Q Consensus 161 ~~L 163 (177)
++.
T Consensus 111 v~~ 113 (114)
T 2w2n_P 111 VFA 113 (114)
T ss_dssp EEE
T ss_pred Eec
Confidence 653
No 2
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P
Probab=99.17 E-value=6e-11 Score=91.08 Aligned_cols=77 Identities=17% Similarity=0.122 Sum_probs=57.1
Q ss_pred ceEEEEEecCCCCCCCchHHHHHHHHHHHHHhhCChhhhhcceeEEecCcceeeeeecCHHHHHHhhCCCCeEEEeCCCC
Q 030454 81 YQHWLIVMEFPNPSELSEEEMINAYVKTLAAVVGSEEEAKKKIYSVCTTTYTGFGALIDEELSYKVKGQPGVLWVLPDSY 160 (177)
Q Consensus 81 ~ktYIV~M~~~~~~~~~~~~~~~~h~s~LaSVlgS~e~Ak~~IlYSYt~af~GFAA~LTeeEA~~Lk~~PGVlSVfPD~~ 160 (177)
...|||.|..... ......|.+++.++... ......+.|+|++.|+||+|+|+++++++|+++|+|..|.||+.
T Consensus 47 p~~YIV~~K~~~~-----~~~~~~~~~~l~~~~~~-r~~g~~i~~~Y~~~~~GFaa~l~~~~~~~L~~~p~V~~VE~D~~ 120 (124)
T 2qtw_A 47 PGTYVVVLKEETH-----LSQSERTARRLQAQAAR-RGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSS 120 (124)
T ss_dssp EEEEEEEECTTCC-----HHHHHHHHHHHHHHHHH-TTCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEE
T ss_pred CCCEEEEECCCCC-----HHHHHHHHHHHHHHHhh-cccCCceEEEecccceEEEEEcCHHHHHHHHcCCCCcEEEeCce
Confidence 4789999975432 23345555666553210 00124699999999999999999999999999999999999987
Q ss_pred ccC
Q 030454 161 IDV 163 (177)
Q Consensus 161 ~~L 163 (177)
++.
T Consensus 121 v~a 123 (124)
T 2qtw_A 121 VFA 123 (124)
T ss_dssp EEE
T ss_pred Eec
Confidence 653
No 3
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=99.14 E-value=1.9e-10 Score=80.35 Aligned_cols=70 Identities=11% Similarity=0.082 Sum_probs=53.1
Q ss_pred ceEEEEEecCCCCCCCchHHHHHHHHHHHHHhhCChhhhhcceeEEecCcceeeeeecCHHHHHHhhCCCCeEEEeCCCC
Q 030454 81 YQHWLIVMEFPNPSELSEEEMINAYVKTLAAVVGSEEEAKKKIYSVCTTTYTGFGALIDEELSYKVKGQPGVLWVLPDSY 160 (177)
Q Consensus 81 ~ktYIV~M~~~~~~~~~~~~~~~~h~s~LaSVlgS~e~Ak~~IlYSYt~af~GFAA~LTeeEA~~Lk~~PGVlSVfPD~~ 160 (177)
.+.|||.+..... . ... +.. +... ....++|+|++ |+||+|+|+++++++|++.|+|..|.||+.
T Consensus 8 ~~~YIV~~k~~~~--~--~~~---~~~-~~~~------~g~~i~~~y~~-~~Gfaa~l~~~~~~~L~~~p~V~~Ve~D~~ 72 (80)
T 3cnq_P 8 EKKYIVGFKQGFK--S--CAK---KED-VISE------KGGKLQKCFKY-VDAASATLNEKAVEELKKDPSVAYVEEDKL 72 (80)
T ss_dssp CCEEEEEECTTCC--S--HHH---HHH-HHHT------TTCEEEEECSS-SSEEEEECCHHHHHHHHTCTTEEEEEECCE
T ss_pred CCCEEEEECCCCC--h--HHH---HHH-HHHH------cCCcceEEEcc-cEEEEEEcCHHHHHHHHhCCCccEEEeCcE
Confidence 4789999975432 1 111 222 2221 22469999998 999999999999999999999999999999
Q ss_pred ccCCC
Q 030454 161 IDVPN 165 (177)
Q Consensus 161 ~~L~~ 165 (177)
++++.
T Consensus 73 v~~~t 77 (80)
T 3cnq_P 73 YRALS 77 (80)
T ss_dssp EEECC
T ss_pred EEEee
Confidence 88764
No 4
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A
Probab=98.42 E-value=1.3e-06 Score=61.01 Aligned_cols=70 Identities=13% Similarity=0.107 Sum_probs=54.4
Q ss_pred eEEEEEecCCCCCCCchHHHHHHHHHHHHHhhCChhhhhcceeEEe-cCcceeeeeecCHHHHHHhhCC--CCeEEEeCC
Q 030454 82 QHWLIVMEFPNPSELSEEEMINAYVKTLAAVVGSEEEAKKKIYSVC-TTTYTGFGALIDEELSYKVKGQ--PGVLWVLPD 158 (177)
Q Consensus 82 ktYIV~M~~~~~~~~~~~~~~~~h~s~LaSVlgS~e~Ak~~IlYSY-t~af~GFAA~LTeeEA~~Lk~~--PGVlSVfPD 158 (177)
..|||.+.... + ....+.|.+++...- ..+.|.| .+.|+||+|.|++++++.|+.. |.|..|=+|
T Consensus 3 ~sYIV~lk~~~---~--~~~~~~~~~~~~~~g-------g~i~~~y~~~~~~Gfa~~~~~~~l~~l~~~~~p~V~~VE~D 70 (76)
T 1v5i_B 3 GKFIVIFKNDV---S--EDKIRETKDEVIAEG-------GTITNEYNMPGMKGFAGELTPQSLTKFQGLQGDLIDSIEED 70 (76)
T ss_dssp EEEEEEECTTC---C--HHHHHHHHHHHHHHT-------CCCCEEEEETTEEEEEEEECHHHHHHHHHTBTTTEEEEEEC
T ss_pred ceEEEEECCCC---C--HHHHHHHHHHHHhhC-------CceEEEEEcCceeEEEEEcCHHHHHHHHhcCCCCCcEEcCC
Confidence 67999995331 1 244566777665542 2588999 4899999999999999999999 889999999
Q ss_pred CCccC
Q 030454 159 SYIDV 163 (177)
Q Consensus 159 ~~~~L 163 (177)
+..++
T Consensus 71 ~~v~~ 75 (76)
T 1v5i_B 71 HVAHA 75 (76)
T ss_dssp CEEEC
T ss_pred cEEeC
Confidence 87654
No 5
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=97.88 E-value=1.7e-05 Score=75.69 Aligned_cols=76 Identities=17% Similarity=0.138 Sum_probs=54.0
Q ss_pred eEEEEEecCCCCCCCchHHHHHHHHHHHHHhhCChhhhhcceeEEecCcceeeeeecCHHHHHHhhCCCCeEEEeCCCCc
Q 030454 82 QHWLIVMEFPNPSELSEEEMINAYVKTLAAVVGSEEEAKKKIYSVCTTTYTGFGALIDEELSYKVKGQPGVLWVLPDSYI 161 (177)
Q Consensus 82 ktYIV~M~~~~~~~~~~~~~~~~h~s~LaSVlgS~e~Ak~~IlYSYt~af~GFAA~LTeeEA~~Lk~~PGVlSVfPD~~~ 161 (177)
..|||.+..... . ...+.+.+++...... .....++.|+|++.|+||+++|+++++++|+++|+|..|.||..+
T Consensus 76 g~YIV~lk~~~~----~-~~~~~~~~~l~a~~~~-~g~~~~v~~~y~~~~~Gfsv~l~~~~l~~L~~~P~V~~Vepd~~v 149 (692)
T 2p4e_P 76 GTYVVVLKEETH----L-SQSERTARRLQAQAAR-RGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSV 149 (692)
T ss_dssp EEEEEEECTTCC----H-HHHHHHHHHHHHHHHH-TTCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEE
T ss_pred CcEEEEECCCCC----H-HHHHHHHHHHHHHHhh-cccccceeeEeeccccEEEEEeCHHHHHHHHcCCCceEEEecccc
Confidence 489999974432 1 2233344444432210 011246899999999999999999999999999999999999866
Q ss_pred cC
Q 030454 162 DV 163 (177)
Q Consensus 162 ~L 163 (177)
..
T Consensus 150 ~~ 151 (692)
T 2p4e_P 150 FA 151 (692)
T ss_dssp EE
T ss_pred cc
Confidence 54
No 6
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=96.86 E-value=0.0018 Score=57.30 Aligned_cols=76 Identities=4% Similarity=0.061 Sum_probs=49.4
Q ss_pred ccceeecCCCceEEEEEecCCCCCCCchHHHHHHHHHHHHHhhCChhhhhcceeEEecCcceeeeeecCHHHHHHhhC-C
Q 030454 71 KETIMLDGCDYQHWLIVMEFPNPSELSEEEMINAYVKTLAAVVGSEEEAKKKIYSVCTTTYTGFGALIDEELSYKVKG-Q 149 (177)
Q Consensus 71 ~~~~l~~g~d~ktYIV~M~~~~~~~~~~~~~~~~h~s~LaSVlgS~e~Ak~~IlYSYt~af~GFAA~LTeeEA~~Lk~-~ 149 (177)
.+.+-+.|...+.|||..... . .-.+.+. ...-+++|.|. .++||+++++++++++|++ .
T Consensus 34 ~~~l~~~~~~~~~yiv~~~~~-------~----~~~~~~~-------~~g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~~ 94 (471)
T 3t41_A 34 HENLYFQGSEELYYSVEYKNT-------A----TFNKLVK-------KKSLNVVYNIP-ELHVAQIKMTKMHANALANYK 94 (471)
T ss_dssp ---------CCEEEEEEESCH-------H----HHHHHHH-------HHTCEEEEEEG-GGTEEEEEECHHHHHHHHTCT
T ss_pred cccceecCCCceEEEEEcCCH-------H----HHHHHHH-------hCCCEEEEecC-CccEEEEEeCHHHHHHHHhcC
Confidence 355667777888899965311 1 1112221 22345788985 4999999999999999999 9
Q ss_pred CCeEEEeCCCCccCCC
Q 030454 150 PGVLWVLPDSYIDVPN 165 (177)
Q Consensus 150 PGVlSVfPD~~~~L~~ 165 (177)
|+|.+|.||..+++..
T Consensus 95 p~V~~v~~~~~~~~~~ 110 (471)
T 3t41_A 95 NDIKYINATCSTCITS 110 (471)
T ss_dssp TTEEEEEECCSSCBCC
T ss_pred CCCcEEEecceecccc
Confidence 9999999998887754
No 7
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=95.94 E-value=0.0051 Score=56.41 Aligned_cols=44 Identities=16% Similarity=0.119 Sum_probs=39.0
Q ss_pred cceeEEecCcceeeeeecCHHHHHHh-----------hCCCCeEEEeCCCCccCCC
Q 030454 121 KKIYSVCTTTYTGFGALIDEELSYKV-----------KGQPGVLWVLPDSYIDVPN 165 (177)
Q Consensus 121 ~~IlYSYt~af~GFAA~LTeeEA~~L-----------k~~PGVlSVfPD~~~~L~~ 165 (177)
.+++|+|+ .|+||+++|+++|+++| ++.|+|..|.||..+++..
T Consensus 60 ~~v~~~~~-~~~g~~~~l~~~~~~~l~~~~~~~~~~~~~~~~V~~v~~d~~~~~~~ 114 (539)
T 3afg_A 60 AKIKYNYH-IIPALAVKIKVKDLLIIAGLMDTGYFGNAQLSGVQFIQEDYVVKVAV 114 (539)
T ss_dssp CEEEEECS-SSSEEEEEEEHHHHHHHTTCSCCC---CCCCTTEEEEEECCEEECC-
T ss_pred CeEEEEee-eeeEEEEEeCHHHHHHHHhhccccccccccCCCeeEEEecccccccC
Confidence 46899996 79999999999999999 8999999999999877654
No 8
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=95.62 E-value=0.013 Score=39.34 Aligned_cols=42 Identities=19% Similarity=0.012 Sum_probs=37.4
Q ss_pred hhcceeEEecCcceeeeeecCHHHHHHhhCCCCeEEEeCCCCc
Q 030454 119 AKKKIYSVCTTTYTGFGALIDEELSYKVKGQPGVLWVLPDSYI 161 (177)
Q Consensus 119 Ak~~IlYSYt~af~GFAA~LTeeEA~~Lk~~PGVlSVfPD~~~ 161 (177)
...+++|.|. .++|++|.|+++.+++|++.|||..|-+|...
T Consensus 21 ~gG~i~~~~~-~I~a~~~~lp~~~~~~L~~~p~V~yVE~D~~v 62 (65)
T 2z30_B 21 IGGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQA 62 (65)
T ss_dssp GTCEEEEECS-SSSEEEEEECGGGHHHHHTSTTEEEEEECCEE
T ss_pred CCCEEEEEec-CCcEEEEEeCHHHHHHHhcCCCceEEecCcEE
Confidence 3457899995 69999999999999999999999999999754
No 9
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=95.55 E-value=0.0078 Score=52.47 Aligned_cols=43 Identities=19% Similarity=0.000 Sum_probs=39.2
Q ss_pred cceeEEecCcceeeeeecCHHHHHHhhCCCCeEEEeCCCCccCC
Q 030454 121 KKIYSVCTTTYTGFGALIDEELSYKVKGQPGVLWVLPDSYIDVP 164 (177)
Q Consensus 121 ~~IlYSYt~af~GFAA~LTeeEA~~Lk~~PGVlSVfPD~~~~L~ 164 (177)
.++++.|.. ++||+++++++++++|++.|+|..|.||..+++.
T Consensus 24 ~~v~~~~~~-~~~~~~~~~~~~~~~L~~~p~V~~v~~~~~~~~~ 66 (395)
T 2z2z_A 24 GHIVYQFKL-IPAVVVDVPANAVGKLKKMPGVEKVEFDHQAVLL 66 (395)
T ss_dssp CEEEEECSS-SSEEEEEEEGGGHHHHHTSTTEEEEEECCEEEEC
T ss_pred CEEEEEecc-CCEEEEEECHHHHHHHHcCCCceEEEEeeeeccc
Confidence 468999975 9999999999999999999999999999988764
No 10
>3ftj_A MACB, macrolide export ATP-binding/permease protein MACB; macrolide-specific pump, ABC-type transporter; 2.00A {Actinobacillus actinomycetemcomitans}
Probab=30.06 E-value=28 Score=26.37 Aligned_cols=24 Identities=13% Similarity=-0.013 Sum_probs=21.3
Q ss_pred eeecCHHHHHHhhCCCCeEEEeCC
Q 030454 135 GALIDEELSYKVKGQPGVLWVLPD 158 (177)
Q Consensus 135 AA~LTeeEA~~Lk~~PGVlSVfPD 158 (177)
...||++++++|++.|||..|-|-
T Consensus 32 ~~~lt~~d~~~l~~~p~V~~v~~~ 55 (226)
T 3ftj_A 32 IQNLKISDANTLSKQSYIQSVTPN 55 (226)
T ss_dssp SCCCBHHHHHHHHTSTTEEEEEEE
T ss_pred cCCCCHHHHHHHhcCCCceEEEEE
Confidence 357999999999999999999885
No 11
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=29.13 E-value=1.5e+02 Score=24.72 Aligned_cols=49 Identities=6% Similarity=0.030 Sum_probs=32.5
Q ss_pred CchHHHHHHHHHHHHHhhCChhhhhcceeEEecCcceeeeeecCHHHHHHhhCCCCeEEEeC
Q 030454 96 LSEEEMINAYVKTLAAVVGSEEEAKKKIYSVCTTTYTGFGALIDEELSYKVKGQPGVLWVLP 157 (177)
Q Consensus 96 ~~~~~~~~~h~s~LaSVlgS~e~Ak~~IlYSYt~af~GFAA~LTeeEA~~Lk~~PGVlSVfP 157 (177)
++.+.+..+|......+ + .+-++|.+ ...|+++...+|.+.|+|+.|--
T Consensus 120 ~s~~~l~~~f~~va~a~-~-----lPiilYn~-------g~~l~~~~~~~La~~pnIvgiKd 168 (316)
T 3e96_A 120 VTAGGVYAYFRDIIEAL-D-----FPSLVYFK-------DPEISDRVLVDLAPLQNLVGVKY 168 (316)
T ss_dssp CCHHHHHHHHHHHHHHH-T-----SCEEEEEC-------CTTSCTHHHHHHTTCTTEEEEEE
T ss_pred CCHHHHHHHHHHHHHhC-C-----CCEEEEeC-------CCCCCHHHHHHHHcCCCEEEEEe
Confidence 44556666665544332 1 23355553 45799999999999999998763
No 12
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=25.31 E-value=1.6e+02 Score=24.55 Aligned_cols=48 Identities=6% Similarity=0.167 Sum_probs=31.0
Q ss_pred CchHHHHHHHHHHHHHhhCChhhhhcceeEEecCcceeeeeecCHHHHHHhhCCCCeEEEe
Q 030454 96 LSEEEMINAYVKTLAAVVGSEEEAKKKIYSVCTTTYTGFGALIDEELSYKVKGQPGVLWVL 156 (177)
Q Consensus 96 ~~~~~~~~~h~s~LaSVlgS~e~Ak~~IlYSYt~af~GFAA~LTeeEA~~Lk~~PGVlSVf 156 (177)
++.+.+..+|.....++ ..+-++|. .+|+ |+++...+|.+.|+|+.|-
T Consensus 120 ~s~~~l~~~f~~va~a~------~lPiilYn----~tg~---l~~~~~~~La~~pnIvgiK 167 (314)
T 3d0c_A 120 ITDAGAVEYYRNIIEAL------DAPSIIYF----KDAH---LSDDVIKELAPLDKLVGIK 167 (314)
T ss_dssp CCHHHHHHHHHHHHHHS------SSCEEEEE----CCTT---SCTHHHHHHTTCTTEEEEE
T ss_pred CCHHHHHHHHHHHHHhC------CCCEEEEe----CCCC---cCHHHHHHHHcCCCEEEEE
Confidence 34455555554433221 12335555 5664 9999999999999999875
No 13
>2ofk_A 3-methyladenine DNA glycosylase I, constitutive; DNA repair, base excision, helix-hairpin-helix, hydrolase; HET: PGE; 1.50A {Salmonella typhi} PDB: 2ofi_A* 1lmz_A 1nku_A 1p7m_A*
Probab=24.39 E-value=12 Score=30.20 Aligned_cols=29 Identities=17% Similarity=0.260 Sum_probs=25.8
Q ss_pred EEecCcceee----eeecCHHHHHHhhCCCCeE
Q 030454 125 SVCTTTYTGF----GALIDEELSYKVKGQPGVL 153 (177)
Q Consensus 125 YSYt~af~GF----AA~LTeeEA~~Lk~~PGVl 153 (177)
-.|..+|.|| .|.++|++.++|..-||++
T Consensus 54 e~fr~AF~~Fd~~~VA~~~e~~ve~Ll~d~~II 86 (183)
T 2ofk_A 54 ENYRACFHQFDPIRIAAMQEEDVERLLQNTGII 86 (183)
T ss_dssp HHHHHHTGGGCHHHHHTCCHHHHHHHTTCTTSC
T ss_pred HHHHHHHcCCCHHHHcCCCHHHHHHHhcCCcch
Confidence 3578899999 5899999999999999986
No 14
>2jg6_A DNA-3-methyladenine glycosidase; 3-methyladenine-DNA-glycosylase-I, hydrolase; 1.70A {Staphylococcus aureus} PDB: 4aia_A* 4ai5_A* 4ai4_A
Probab=22.53 E-value=15 Score=29.85 Aligned_cols=29 Identities=10% Similarity=0.185 Sum_probs=25.8
Q ss_pred EEecCcceee----eeecCHHHHHHhhCCCCeE
Q 030454 125 SVCTTTYTGF----GALIDEELSYKVKGQPGVL 153 (177)
Q Consensus 125 YSYt~af~GF----AA~LTeeEA~~Lk~~PGVl 153 (177)
-.|..+|.|| .|.++|++.++|..-||++
T Consensus 54 e~fR~AF~~FD~~~VA~~~e~dve~Ll~d~gII 86 (186)
T 2jg6_A 54 EAYEEAFYDFEPEKVAQMTAQDIDRLMTFPNIV 86 (186)
T ss_dssp HHHHHHTGGGCHHHHTTCCHHHHHHHTTCTTSC
T ss_pred HHHHHHHcCCCHHHHhCCCHHHHHHHhcCccch
Confidence 3578899999 6899999999999999986
Done!