Your job contains 1 sequence.
>030459
MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN
RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK
AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHIRLQNMPA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 030459
(177 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2183234 - symbol:AT5G19830 species:3702 "Arabi... 602 1.2e-58 1
TAIR|locus:2181412 - symbol:AT5G16140 species:3702 "Arabi... 422 1.4e-39 1
TAIR|locus:2173298 - symbol:AT5G38290 species:3702 "Arabi... 418 3.7e-39 1
TAIR|locus:2014134 - symbol:AT1G18440 species:3702 "Arabi... 417 4.8e-39 1
TIGR_CMR|CHY_0196 - symbol:CHY_0196 "peptidyl-tRNA hydrol... 246 6.3e-21 1
TIGR_CMR|BA_0050 - symbol:BA_0050 "peptidyl-tRNA hydrolas... 232 1.9e-19 1
UNIPROTKB|P65865 - symbol:pth "Peptidyl-tRNA hydrolase" s... 226 8.3e-19 1
TIGR_CMR|DET_0595 - symbol:DET_0595 "peptidyl-tRNA hydrol... 225 1.1e-18 1
TIGR_CMR|VC_2184 - symbol:VC_2184 "peptidyl-tRNA hydrolas... 203 2.3e-16 1
TIGR_CMR|GSU_0663 - symbol:GSU_0663 "peptidyl-tRNA hydrol... 197 9.8e-16 1
UNIPROTKB|P0A7D1 - symbol:pth "peptidyl-tRNA hydrolase" s... 181 4.9e-14 1
TIGR_CMR|SO_1184 - symbol:SO_1184 "peptidyl-tRNA hydrolas... 178 1.0e-13 1
TIGR_CMR|CPS_3559 - symbol:CPS_3559 "peptidyl-tRNA hydrol... 177 1.3e-13 1
TIGR_CMR|SPO_0811 - symbol:SPO_0811 "peptidyl-tRNA hydrol... 157 1.7e-11 1
TIGR_CMR|ECH_0141 - symbol:ECH_0141 "peptidyl-tRNA hydrol... 154 3.5e-11 1
UNIPROTKB|E1BK88 - symbol:PTRH1 "Uncharacterized protein"... 146 2.5e-10 1
TIGR_CMR|NSE_0307 - symbol:NSE_0307 "peptidyl-tRNA hydrol... 146 2.5e-10 1
UNIPROTKB|F1RS13 - symbol:PTRH1 "Uncharacterized protein"... 143 5.2e-10 1
UNIPROTKB|F1RS14 - symbol:PTRH1 "Uncharacterized protein"... 143 5.2e-10 1
TIGR_CMR|CBU_1841 - symbol:CBU_1841 "peptidyl-tRNA hydrol... 142 6.6e-10 1
UNIPROTKB|Q86Y79 - symbol:PTRH1 "Probable peptidyl-tRNA h... 134 4.7e-09 1
DICTYBASE|DDB_G0280507 - symbol:DDB_G0280507 "Peptidyl-tR... 140 8.5e-09 1
UNIPROTKB|E2RR88 - symbol:PTRH1 "Uncharacterized protein"... 128 2.5e-08 1
ZFIN|ZDB-GENE-050306-33 - symbol:ptrh1 "peptidyl-tRNA hyd... 131 2.6e-08 1
SGD|S000001232 - symbol:PTH1 "One of two mitochondrially-... 119 1.8e-07 1
TIGR_CMR|CJE_0357 - symbol:CJE_0357 "peptidyl-tRNA hydrol... 116 1.0e-06 1
MGI|MGI:1913779 - symbol:Ptrh1 "peptidyl-tRNA hydrolase 1... 116 2.1e-06 1
TIGR_CMR|APH_1301 - symbol:APH_1301 "peptidyl-tRNA hydrol... 104 0.00019 1
>TAIR|locus:2183234 [details] [associations]
symbol:AT5G19830 species:3702 "Arabidopsis thaliana"
[GO:0004045 "aminoacyl-tRNA hydrolase activity" evidence=IEA;ISS]
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0006412 "translation"
evidence=ISS] [GO:0006783 "heme biosynthetic process" evidence=RCA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 GO:GO:0005739 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0008380 GO:GO:0006397 GO:GO:0030529
GO:GO:0004045 HSSP:P0A7D1 eggNOG:COG0193 HOGENOM:HOG000004797
KO:K01056 Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178
TIGRFAMs:TIGR00447 EMBL:AF296838 EMBL:BT011605 EMBL:BT012252
EMBL:AK227887 IPI:IPI00521866 RefSeq:NP_197484.4 UniGene:At.31249
ProteinModelPortal:Q6NLS8 SMR:Q6NLS8 STRING:Q6NLS8
EnsemblPlants:AT5G19830.1 GeneID:832103 KEGG:ath:AT5G19830
TAIR:At5g19830 InParanoid:Q6NLS8 OMA:FRKNREF PhylomeDB:Q6NLS8
ProtClustDB:CLSN2681642 Genevestigator:Q6NLS8 Uniprot:Q6NLS8
Length = 219
Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
Identities = 121/171 (70%), Positives = 133/171 (77%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MID FAES GI MN V+ KA GQGFV D PV+LAKPQTYMNLSGES+GPLAAYYKLPLN
Sbjct: 42 MIDVFAESVGIQMNLVNFKAIMGQGFVADLPVILAKPQTYMNLSGESSGPLAAYYKLPLN 101
Query: 61 RVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
RVLV HDDM LPCGV KSVMN+FRGNREFARLRIGIG+PPGQMDPK
Sbjct: 102 RVLVVHDDMQLPCGVLRLQEKGGHGCHNGLKSVMNHFRGNREFARLRIGIGKPPGQMDPK 161
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHIR 171
AFLLQKF+ ARER+D AL EGV+ LKL+L+K ES R FN QKYKH++
Sbjct: 162 AFLLQKFSMPARERMDKALAEGVDALKLVLAKDFGESWRLFNVEQKYKHLK 212
>TAIR|locus:2181412 [details] [associations]
symbol:AT5G16140 species:3702 "Arabidopsis thaliana"
[GO:0004045 "aminoacyl-tRNA hydrolase activity" evidence=IEA;ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0006783 "heme biosynthetic process" evidence=RCA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009570 GO:GO:0008380 GO:GO:0006397 GO:GO:0030529
GO:GO:0004045 EMBL:AL391148 EMBL:BT010650 EMBL:AK175292
IPI:IPI00533319 PIR:T51484 RefSeq:NP_001078593.1 RefSeq:NP_197118.1
UniGene:At.31709 HSSP:P0A7D1 ProteinModelPortal:Q9LF14 SMR:Q9LF14
STRING:Q9LF14 PRIDE:Q9LF14 EnsemblPlants:AT5G16140.1
EnsemblPlants:AT5G16140.2 GeneID:831471 KEGG:ath:AT5G16140
GeneFarm:2616 TAIR:At5g16140 eggNOG:COG0193 HOGENOM:HOG000004797
InParanoid:Q9LF14 KO:K01056 OMA:SEFINDF PhylomeDB:Q9LF14
ProtClustDB:CLSN2686133 Genevestigator:Q9LF14 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447 Uniprot:Q9LF14
Length = 240
Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 81/168 (48%), Positives = 108/168 (64%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MID A +G+ MNT+ KA G G + D P+LLAKPQTYMN SGES G LA++Y++PL
Sbjct: 69 MIDVLARKEGVLMNTIQSKALIGIGAIEDVPILLAKPQTYMNFSGESVGSLASHYRVPLR 128
Query: 61 RVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+L+ +D+M LP GV KSVM + G R F RL IGIG+PPG MD K
Sbjct: 129 HILMIYDEMALPNGVLRLQPKGGQGYHNGVKSVMGHLDGRRNFPRLSIGIGKPPGNMDMK 188
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYK 168
AFLLQKF+ + +++I+ AL++G E +K L+ G + FN +QKYK
Sbjct: 189 AFLLQKFSPLEQKQIEEALEQGSEAVKTLVLNGFNQGISRFNLVQKYK 236
>TAIR|locus:2173298 [details] [associations]
symbol:AT5G38290 species:3702 "Arabidopsis thaliana"
[GO:0004045 "aminoacyl-tRNA hydrolase activity" evidence=IEA;ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0006783 "heme biosynthetic process" evidence=RCA]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0016556 "mRNA
modification" evidence=RCA] [GO:0030154 "cell differentiation"
evidence=RCA] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 EMBL:CP002688
GO:GO:0004045 HOGENOM:HOG000004797 KO:K01056
ProtClustDB:CLSN2686133 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 TIGRFAMs:TIGR00447 EMBL:AB011481 IPI:IPI00516328
RefSeq:NP_974860.1 UniGene:At.30420 ProteinModelPortal:A8MQQ3
SMR:A8MQQ3 STRING:A8MQQ3 PRIDE:A8MQQ3 EnsemblPlants:AT5G38290.2
GeneID:833811 KEGG:ath:AT5G38290 OMA:FEMIDHI Genevestigator:A8MQQ3
Uniprot:A8MQQ3
Length = 250
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 84/168 (50%), Positives = 108/168 (64%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MID A + ISMNT+ KA G G VG+ P+LL KPQ YMN SGES GPLAAYY++PL
Sbjct: 79 MIDHIARATDISMNTIQSKALVGIGSVGEVPILLVKPQGYMNFSGESVGPLAAYYQIPLR 138
Query: 61 RVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+L+ +DDMGL GV K+V + G R + RL IGIG PPG MD K
Sbjct: 139 HILMIYDDMGLSNGVLRLQPKGGHSQHNGLKNVTEHLNGCRGYPRLSIGIGNPPGNMDMK 198
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYK 168
AFLLQKF+ + R+++D L++GVE +K L+ +G ++S FN QKYK
Sbjct: 199 AFLLQKFSPLERKQMDEGLEQGVEGVKTLVEEGFSDSISRFNLGQKYK 246
>TAIR|locus:2014134 [details] [associations]
symbol:AT1G18440 species:3702 "Arabidopsis thaliana"
[GO:0004045 "aminoacyl-tRNA hydrolase activity" evidence=IEA;ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0006783 "heme biosynthetic process"
evidence=RCA] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009507 GO:GO:0009570 EMBL:AC013354
GO:GO:0004045 PIR:C86318 HSSP:P0A7D1 eggNOG:COG0193
HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447 EMBL:AK119054
EMBL:BT005284 IPI:IPI00539130 RefSeq:NP_173279.2 UniGene:At.22357
ProteinModelPortal:Q8GW64 SMR:Q8GW64 STRING:Q8GW64 PaxDb:Q8GW64
PRIDE:Q8GW64 EnsemblPlants:AT1G18440.1 GeneID:838424
KEGG:ath:AT1G18440 TAIR:At1g18440 InParanoid:Q8GW64 OMA:VINWVLK
PhylomeDB:Q8GW64 ProtClustDB:CLSN2918163 Genevestigator:Q8GW64
Uniprot:Q8GW64
Length = 288
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 77/163 (47%), Positives = 114/163 (69%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
M+DA A+++GISMNTV+ KA FG+G +G+ P++LAKPQT+MNLSGES G + ++YK+PL
Sbjct: 118 MVDALADAEGISMNTVNFKALFGKGVIGNIPIMLAKPQTFMNLSGESVGQIVSFYKIPLK 177
Query: 61 RVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+VLV +DD+ LP G +S+++ +G+R+F RLRIGIGRPPG+MD
Sbjct: 178 QVLVVYDDLDLPFGKLRLLPKGGHGGHNGMRSIIDRLKGSRDFPRLRIGIGRPPGKMDTA 237
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
F+L++FN +E +D Q G+E +++LL +G +SA NT
Sbjct: 238 NFVLRQFNRQEQEELDHTFQTGLEAIRILLLEGFNKSATFVNT 280
>TIGR_CMR|CHY_0196 [details] [associations]
symbol:CHY_0196 "peptidyl-tRNA hydrolase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR001328 InterPro:IPR018171
Pfam:PF01195 PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083
GO:GO:0005737 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0004045
eggNOG:COG0193 HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447
ProtClustDB:PRK05426 EMBL:AF244580 RefSeq:YP_359068.1
ProteinModelPortal:Q9F8Q3 STRING:Q9F8Q3 GeneID:3726668
KEGG:chy:CHY_0196 PATRIC:21273573 OMA:IKFKTGG
BioCyc:CHYD246194:GJCN-197-MONOMER Uniprot:Q9F8Q3
Length = 187
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 56/162 (34%), Positives = 87/162 (53%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A+ GI + K+ G+G + VLL KPQTYMNLSG + ++YKLPL+
Sbjct: 25 VVDELAKKHGILITKRKFKSLVGEGEILGVKVLLLKPQTYMNLSGTAVQEAVSFYKLPLS 84
Query: 61 RVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
R++V +DD+ LP G S+++ G+ E RL+IGIGRP D K
Sbjct: 85 RLVVVYDDLDLPLGKIRLRLKGSAGGHRGMGSIISCL-GSEEIPRLKIGIGRP-AVGDVK 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++LQ F RE ++ L+ E + + L++G ++ FN
Sbjct: 143 DYVLQPFTGAEREILEPTLKLAAEAITVALTEGFNKAMTDFN 184
>TIGR_CMR|BA_0050 [details] [associations]
symbol:BA_0050 "peptidyl-tRNA hydrolase" species:198094
"Bacillus anthracis str. Ames" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0004045
eggNOG:COG0193 HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447
ProtClustDB:PRK05426 RefSeq:NP_842619.1 RefSeq:YP_016653.1
RefSeq:YP_026337.1 ProteinModelPortal:Q81VY9 DNASU:1087397
EnsemblBacteria:EBBACT00000008195 EnsemblBacteria:EBBACT00000017228
EnsemblBacteria:EBBACT00000022310 GeneID:1087397 GeneID:2819040
GeneID:2853113 KEGG:ban:BA_0050 KEGG:bar:GBAA_0050 KEGG:bat:BAS0050
OMA:KPETFMN BioCyc:BANT260799:GJAJ-57-MONOMER
BioCyc:BANT261594:GJ7F-59-MONOMER Uniprot:Q81VY9
Length = 186
Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 53/162 (32%), Positives = 83/162 (51%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ +
Sbjct: 26 IDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVED 85
Query: 62 VLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+V +DD+ +P G KS +++ G +EF R+R+GI RP M
Sbjct: 86 FVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKNGMKVVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F + ++ ++++ + + L+K + FN+
Sbjct: 145 YVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQIMNTFNS 186
>UNIPROTKB|P65865 [details] [associations]
symbol:pth "Peptidyl-tRNA hydrolase" species:1773
"Mycobacterium tuberculosis" [GO:0004045 "aminoacyl-tRNA hydrolase
activity" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] InterPro:IPR001328
InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195 PROSITE:PS01196
HAMAP:MF_00083 GO:GO:0005886 GO:GO:0005737 GO:GO:0040007
EMBL:BX842575 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0004045 eggNOG:COG0193 KO:K01056
Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178
TIGRFAMs:TIGR00447 HOGENOM:HOG000004796 OMA:VINWVLK
ProtClustDB:PRK05426 PIR:A70622 RefSeq:NP_215530.1
RefSeq:NP_335479.1 RefSeq:YP_006514375.1 PDB:2JRC PDB:2Z2I PDB:2Z2J
PDB:2Z2K PDB:3TCK PDB:3TCN PDB:3TD2 PDB:3TD6 PDBsum:2JRC
PDBsum:2Z2I PDBsum:2Z2J PDBsum:2Z2K PDBsum:3TCK PDBsum:3TCN
PDBsum:3TD2 PDBsum:3TD6 ProteinModelPortal:P65865 SMR:P65865
PRIDE:P65865 EnsemblBacteria:EBMYCT00000001706
EnsemblBacteria:EBMYCT00000072150 GeneID:13319576 GeneID:886037
GeneID:925158 KEGG:mtc:MT1042 KEGG:mtu:Rv1014c KEGG:mtv:RVBD_1014c
PATRIC:18124034 TubercuList:Rv1014c EvolutionaryTrace:P65865
Uniprot:P65865
Length = 191
Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 47/129 (36%), Positives = 73/129 (56%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXK 91
++LAKP+ YMN SG GPLA +Y + ++V HDD+ L G +
Sbjct: 60 LVLAKPRCYMNESGRQIGPLAKFYSVAPANIIVIHDDLDLEFGRIRLKIGGGEGGHNGLR 119
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
SV+ G ++F R+RIGIGRPPG+ DP AF+L+ F R + T ++ + +LL+
Sbjct: 120 SVVAAL-GTKDFQRVRIGIGRPPGRKDPAAFVLENFTPAERAEVPTICEQAADATELLIE 178
Query: 152 KGLTESARH 160
+G+ E A++
Sbjct: 179 QGM-EPAQN 186
>TIGR_CMR|DET_0595 [details] [associations]
symbol:DET_0595 "peptidyl-tRNA hydrolase" species:243164
"Dehalococcoides ethenogenes 195" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001328 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0004045 eggNOG:COG0193
HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447 OMA:VINWVLK
ProtClustDB:PRK05426 RefSeq:YP_181337.1 ProteinModelPortal:Q3Z8W2
STRING:Q3Z8W2 GeneID:3230075 KEGG:det:DET0595 PATRIC:21608261
BioCyc:DETH243164:GJNF-596-MONOMER Uniprot:Q3Z8W2
Length = 189
Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 54/165 (32%), Positives = 81/165 (49%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+ FA+ IS + C + G G + D ++LAKPQTYMNLSG++ L Y L
Sbjct: 26 LSRFAKDNHISFDKKCCLSRTGSGRINDEEIVLAKPQTYMNLSGKAASQLLRRYNLKAAD 85
Query: 62 VLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V DD+ LP G S++ + G +EF RL+IGIG+P + +
Sbjct: 86 IIVVQDDLDLPAGKIRLRLGGSAGGHNGISSIITDI-GTKEFIRLKIGIGKPDSRNNGTE 144
Query: 122 FL---LQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
+ L F RE +D A+ E L LL+ GL ++ FN+
Sbjct: 145 VVDHVLGNFGGEEREIMDKAITRASEALTCLLTFGLDTASNRFNS 189
>TIGR_CMR|VC_2184 [details] [associations]
symbol:VC_2184 "peptidyl-tRNA hydrolase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0004045
eggNOG:COG0193 KO:K01056 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 TIGRFAMs:TIGR00447 ProtClustDB:PRK05426 OMA:IKFKTGG
PIR:C82107 RefSeq:NP_231815.1 ProteinModelPortal:Q9KQ21 SMR:Q9KQ21
DNASU:2613320 GeneID:2613320 KEGG:vch:VC2184 PATRIC:20083381
Uniprot:Q9KQ21
Length = 196
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 45/130 (34%), Positives = 71/130 (54%)
Query: 37 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNN 96
P T+MNLSG++ LA +Y++ ++V HD++ LP GV K ++
Sbjct: 66 PTTFMNLSGKAIAALANFYQIKPEEIMVAHDELDLPPGVAKFKQGGGHGGHNGLKDTISK 125
Query: 97 FRGNREFARLRIGIGRPPGQMDPKA-FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 155
N+EF RLR+GIG P G D A ++L K A +E +D A+ E V L++L+ GLT
Sbjct: 126 LGNNKEFYRLRLGIGHP-GHKDKVAGYVLGKAPAKEQECLDAAVDESVRCLEILMKDGLT 184
Query: 156 ESARHFNTIQ 165
++ +T +
Sbjct: 185 KAQNRLHTFK 194
>TIGR_CMR|GSU_0663 [details] [associations]
symbol:GSU_0663 "peptidyl-tRNA hydrolase" species:243231
"Geobacter sulfurreducens PCA" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0004045
eggNOG:COG0193 KO:K01056 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 TIGRFAMs:TIGR00447 HOGENOM:HOG000004796 OMA:VINWVLK
ProtClustDB:PRK05426 RefSeq:NP_951720.1 ProteinModelPortal:Q74FE6
GeneID:2685517 KEGG:gsu:GSU0663 PATRIC:22024085
BioCyc:GSUL243231:GH27-682-MONOMER Uniprot:Q74FE6
Length = 193
Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 54/164 (32%), Positives = 82/164 (50%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A + G S+ FG+G +LL KPQTYMNLSG S ++KLPL
Sbjct: 27 VLDRLAHAIGASVTRKSFSGVFGEGAWHGERLLLLKPQTYMNLSGRSVAEALRFHKLPLC 86
Query: 61 RVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+V HDD+ +P G +S++ G F R+R+GIGRP D
Sbjct: 87 DTIVIHDDLDIPFGRVKVKEGGGHGGHNGLRSLVQEL-GGAGFVRVRVGIGRPV-HGDVV 144
Query: 121 AFLLQKFNAIARERIDTA-LQEG-VEVLKLLLSKGLTESARHFN 162
++L F+ E D A L +G +++L+ LL+ GL ++ +N
Sbjct: 145 NYVLTNFSQ--DEMADLAHLLDGTLDLLESLLTAGLPKTMSLYN 186
>UNIPROTKB|P0A7D1 [details] [associations]
symbol:pth "peptidyl-tRNA hydrolase" species:83333
"Escherichia coli K-12" [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IDA;IMP]
[GO:0004045 "aminoacyl-tRNA hydrolase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR001328
InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195 PROSITE:PS01196
HAMAP:MF_00083 GO:GO:0005737 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0006515
GO:GO:0004045 eggNOG:COG0193 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447
HOGENOM:HOG000004796 EMBL:X61941 ProtClustDB:PRK05426 OMA:IKFKTGG
PIR:S16753 RefSeq:NP_415722.1 RefSeq:YP_489471.1 PDB:2PTH PDB:3VJR
PDBsum:2PTH PDBsum:3VJR ProteinModelPortal:P0A7D1 SMR:P0A7D1
DIP:DIP-35932N IntAct:P0A7D1 MINT:MINT-1225563 PRIDE:P0A7D1
EnsemblBacteria:EBESCT00000000501 EnsemblBacteria:EBESCT00000017627
GeneID:12933876 GeneID:945765 KEGG:ecj:Y75_p1176 KEGG:eco:b1204
PATRIC:32117660 EchoBASE:EB0778 EcoGene:EG10785
BioCyc:EcoCyc:EG10785-MONOMER BioCyc:ECOL316407:JW1195-MONOMER
BioCyc:MetaCyc:EG10785-MONOMER SABIO-RK:P0A7D1
EvolutionaryTrace:P0A7D1 Genevestigator:P0A7D1 Uniprot:P0A7D1
Length = 194
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 40/139 (28%), Positives = 69/139 (49%)
Query: 27 VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXX 86
+G V L P T+MNLSG++ +A+++++ + +LV HD++ LP GV
Sbjct: 54 LGGEDVRLLVPTTFMNLSGKAVAAMASFFRINPDEILVAHDELDLPPGVAKFKLGGGHGG 113
Query: 87 XXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 146
K +++ N F RLRIGIG P + F+L K ++ ID A+ E
Sbjct: 114 HNGLKDIISKLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCT 173
Query: 147 KLLLSKGLTESARHFNTIQ 165
++ + GLT++ + +
Sbjct: 174 EMWFTDGLTKATNRLHAFK 192
>TIGR_CMR|SO_1184 [details] [associations]
symbol:SO_1184 "peptidyl-tRNA hydrolase" species:211586
"Shewanella oneidensis MR-1" [GO:0004045 "aminoacyl-tRNA hydrolase
activity" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0004045 eggNOG:COG0193 KO:K01056
Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178
TIGRFAMs:TIGR00447 HOGENOM:HOG000004796 ProtClustDB:PRK05426
OMA:IKFKTGG RefSeq:NP_716809.1 ProteinModelPortal:Q8EHN5 SMR:Q8EHN5
GeneID:1169013 KEGG:son:SO_1184 PATRIC:23522008 Uniprot:Q8EHN5
Length = 195
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 39/134 (29%), Positives = 68/134 (50%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXK 91
V L P TYMNLSG++ G LA ++++ +LV HD++ +P GV K
Sbjct: 60 VRLLIPTTYMNLSGKAVGALANFFRITPEEILVAHDELDMPPGVAKFKLGGGHGGHNGLK 119
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
++ ++ F RLRIGIG P + ++L K A +E I+ A+ E V ++L
Sbjct: 120 DIIAKLANDKNFYRLRIGIGHPGDKNKVSGYVLGKAPAKEQELINAAVDEAVRSTEILFK 179
Query: 152 KGLTESARHFNTIQ 165
+ + ++ ++ +
Sbjct: 180 EDMVKAMTRLHSFK 193
>TIGR_CMR|CPS_3559 [details] [associations]
symbol:CPS_3559 "peptidyl-tRNA hydrolase" species:167879
"Colwellia psychrerythraea 34H" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0004045
eggNOG:COG0193 KO:K01056 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 TIGRFAMs:TIGR00447 HOGENOM:HOG000004796
ProtClustDB:PRK05426 OMA:IKFKTGG RefSeq:YP_270233.1
ProteinModelPortal:Q47Y87 SMR:Q47Y87 STRING:Q47Y87 GeneID:3518514
KEGG:cps:CPS_3559 PATRIC:21470049
BioCyc:CPSY167879:GI48-3587-MONOMER Uniprot:Q47Y87
Length = 194
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 44/166 (26%), Positives = 79/166 (47%)
Query: 2 IDAFAESQGISMNTVH-CKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++ A S IS+ +G+G + V L P T+MN SG++ PLA +YK+ ++
Sbjct: 28 VEELARSHNISLRPEKKYSGLYGKGLIAGNLVHLLIPTTFMNRSGQAVAPLANFYKISVD 87
Query: 61 RVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDP- 119
+LV HD++ + GV + +++ N++F RLRIGI P G D
Sbjct: 88 EILVAHDELDMLPGVCKIKKGGGHGGHNGLRDIIDRMANNKDFYRLRIGIDHP-GHRDKV 146
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQ 165
+L K + + +I+ A+ E L + L L ++ ++ +
Sbjct: 147 TGHVLGKAPSAEQAKIEQAIDEASRCLDIWLKDDLKKAQNRLHSFK 192
>TIGR_CMR|SPO_0811 [details] [associations]
symbol:SPO_0811 "peptidyl-tRNA hydrolase" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0004045 "aminoacyl-tRNA hydrolase
activity" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0004045 eggNOG:COG0193 KO:K01056
Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178
TIGRFAMs:TIGR00447 HOGENOM:HOG000004796 ProtClustDB:PRK05426
OMA:KPETFMN RefSeq:YP_166064.1 ProteinModelPortal:Q5LV91
GeneID:3195572 KEGG:sil:SPO0811 PATRIC:23374899 Uniprot:Q5LV91
Length = 239
Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 46/164 (28%), Positives = 76/164 (46%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D AE G V + +G +G VLL KP+T+MN SG+S G +YKL
Sbjct: 26 LDRIAEDHGFGPWRVKFQGQIAEGRLGREKVLLLKPETFMNRSGQSVGEAMRFYKLDSTD 85
Query: 62 VLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+ V HD++ L G +S+ ++ + R+R+GIG P G+ + A
Sbjct: 86 ITVLHDELDLAPGKVKVKAGGGHAGHNGLRSIHDHI--GAAYDRVRLGIGHP-GRKEAVA 142
Query: 122 -FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTI 164
++L F + ++ L+ GV L+ G + AR N++
Sbjct: 143 GYVLHDFARADEDWLEDVLR-GVSEGAPHLAAG--DGARFMNSV 183
>TIGR_CMR|ECH_0141 [details] [associations]
symbol:ECH_0141 "peptidyl-tRNA hydrolase" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0004045
eggNOG:COG0193 HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447
ProtClustDB:PRK05426 RefSeq:YP_506969.1 ProteinModelPortal:Q2GHW4
STRING:Q2GHW4 GeneID:3927185 KEGG:ech:ECH_0141 PATRIC:20575827
OMA:YVLKPPR BioCyc:ECHA205920:GJNR-141-MONOMER Uniprot:Q2GHW4
Length = 198
Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 49/175 (28%), Positives = 84/175 (48%)
Query: 1 MIDAFA-ESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPL 59
++DA A E S H A G + V+L KP T+MN SG +A+ YK+PL
Sbjct: 26 IVDAIASEFYFPSFRERH-NALISIGNIKSHRVILVKPWTFMNNSGAPIMSIASLYKIPL 84
Query: 60 NRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQ--- 116
+ +++FHD++ + KS+ +N G +++ R+R GIGRP +
Sbjct: 85 DNIIIFHDEVEINFCTIRVKKSGGNAGHNGLKSI-DNLLG-KDYWRVRFGIGRPINKTNL 142
Query: 117 -MDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHI 170
+D ++L +F+ I + ++ + VE + LLL K + + KY+ I
Sbjct: 143 KIDLSYYVLSQFHNI--KAVNNTILNIVEHITLLLEKKPSMFMEKVKNLIKYEDI 195
>UNIPROTKB|E1BK88 [details] [associations]
symbol:PTRH1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=IEA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01196
GO:GO:0005739 GO:GO:0004045 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 OMA:IKFKTGG GeneTree:ENSGT00390000004247
EMBL:DAAA02032156 IPI:IPI00689946 Ensembl:ENSBTAT00000016930
Uniprot:E1BK88
Length = 216
Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 36/131 (27%), Positives = 61/131 (46%)
Query: 18 CKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAY--YKLPLNRVLVFHDDMGLPCGV 75
C A Q +GDA ++L +P+ MNL+G S + L V + HD++ P G
Sbjct: 72 CAADLAQASLGDAQLVLLRPRRLMNLNGHSVAQAGQVELFGLTAEEVYLVHDELDKPLGK 131
Query: 76 XXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERI 135
+S M+ N RL++GIGRP + +A++L +F+ +E +
Sbjct: 132 VALKLGGSARGHNGVRSCMSCLNSNA-MPRLQVGIGRPTHRDAVQAYVLGRFSPAEQELL 190
Query: 136 DTALQEGVEVL 146
L+ V++L
Sbjct: 191 PPVLERAVDLL 201
>TIGR_CMR|NSE_0307 [details] [associations]
symbol:NSE_0307 "peptidyl-tRNA hydrolase" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737
GO:GO:0004045 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0193 HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447
ProtClustDB:PRK05426 RefSeq:YP_506197.1 ProteinModelPortal:Q2GE99
STRING:Q2GE99 GeneID:3931915 KEGG:nse:NSE_0307 PATRIC:22680705
OMA:LADIPIM BioCyc:NSEN222891:GHFU-333-MONOMER Uniprot:Q2GE99
Length = 194
Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 44/138 (31%), Positives = 61/138 (44%)
Query: 25 GFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXX 84
G V + L KP +MN SG L +YK+ L V+VFHDD+ L
Sbjct: 54 GRVSSFLLYLFKPVAFMNNSGRPLVQLVNFYKVELENVIVFHDDIDLDFAKVKIKRGGGS 113
Query: 85 XXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVE 144
KS+ +F R++ R R G+GR G DP +L +F A+ ER++
Sbjct: 114 GGHNGLKSL--DFNLGRDYWRFRFGVGRGVG--DPAEHVLSRFTALELERLNKLFGFIGT 169
Query: 145 VLKLLLSKGLTESARHFN 162
L LLLS T + N
Sbjct: 170 NLPLLLSDIATRKEKFLN 187
>UNIPROTKB|F1RS13 [details] [associations]
symbol:PTRH1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=IEA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01196
GO:GO:0005739 GO:GO:0004045 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 OMA:FSSKHNA GeneTree:ENSGT00390000004247
EMBL:CU407281 Ensembl:ENSSSCT00000006175 Uniprot:F1RS13
Length = 213
Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 35/129 (27%), Positives = 58/129 (44%)
Query: 18 CKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXX 77
C A +GDA V+L +P+ MN +G S A + L V + HD++ P G
Sbjct: 72 CAADLALASLGDAQVVLLRPRRLMNNNGRSVARAAELFGLTAEEVYLVHDELDKPLGKLA 131
Query: 78 XXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDT 137
+S ++ N RLR+GIGRP +A++L +F+ +E +
Sbjct: 132 LKLGGSARGHNGVRSCISCLNSNA-MPRLRVGIGRPTHPDTVQAYVLGRFSLAEQELLPP 190
Query: 138 ALQEGVEVL 146
L+ ++L
Sbjct: 191 LLERATDLL 199
>UNIPROTKB|F1RS14 [details] [associations]
symbol:PTRH1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004045 "aminoacyl-tRNA hydrolase activity"
evidence=IEA] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01196 GO:GO:0004045 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 GeneTree:ENSGT00390000004247 EMBL:CU407281
Ensembl:ENSSSCT00000006174 Uniprot:F1RS14
Length = 204
Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 35/129 (27%), Positives = 58/129 (44%)
Query: 18 CKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXX 77
C A +GDA V+L +P+ MN +G S A + L V + HD++ P G
Sbjct: 72 CAADLALASLGDAQVVLLRPRRLMNNNGRSVARAAELFGLTAEEVYLVHDELDKPLGKLA 131
Query: 78 XXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDT 137
+S ++ N RLR+GIGRP +A++L +F+ +E +
Sbjct: 132 LKLGGSARGHNGVRSCISCLNSNA-MPRLRVGIGRPTHPDTVQAYVLGRFSLAEQELLPP 190
Query: 138 ALQEGVEVL 146
L+ ++L
Sbjct: 191 LLERATDLL 199
>TIGR_CMR|CBU_1841 [details] [associations]
symbol:CBU_1841 "peptidyl-tRNA hydrolase" species:227377
"Coxiella burnetii RSA 493" [GO:0004045 "aminoacyl-tRNA hydrolase
activity" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0004045 eggNOG:COG0193 KO:K01056
Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178
TIGRFAMs:TIGR00447 HOGENOM:HOG000004796 ProtClustDB:PRK05426
OMA:FSSKHNA RefSeq:NP_820820.1 ProteinModelPortal:Q83AP0
PRIDE:Q83AP0 GeneID:1209753 KEGG:cbu:CBU_1841 PATRIC:17932413
BioCyc:CBUR227377:GJ7S-1815-MONOMER Uniprot:Q83AP0
Length = 187
Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 42/161 (26%), Positives = 73/161 (45%)
Query: 5 FAESQGISMNTVHCKATFGQGFVGDA-PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVL 63
F E+ N K GFV L KP T+MN SG++ LA +YK+ + +L
Sbjct: 29 FLETLAQQRNQSLAKENKFHGFVAKCNDYWLLKPTTFMNESGQAVAALAHFYKIKPSEIL 88
Query: 64 VFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKA-F 122
+ HD++ P G ++++ + G+ +F RLRIGI P G D +
Sbjct: 89 IAHDELDFPAGDIRLKEGGGHGGHNGLRNIIQHL-GSSDFYRLRIGINHP-GHKDRVTPY 146
Query: 123 LLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
+L + R I A+++G+ ++ L+ + R ++
Sbjct: 147 VLSPPSENDRIAILAAIEKGLRLIPELVQGDFQKVMRELHS 187
>UNIPROTKB|Q86Y79 [details] [associations]
symbol:PTRH1 "Probable peptidyl-tRNA hydrolase"
species:9606 "Homo sapiens" [GO:0004045 "aminoacyl-tRNA hydrolase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 GO:GO:0005739 GO:GO:0004045 eggNOG:COG0193
HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 OMA:KPETFMN EMBL:BC047012
IPI:IPI00048572 RefSeq:NP_001002913.1 UniGene:Hs.653265
ProteinModelPortal:Q86Y79 SMR:Q86Y79 IntAct:Q86Y79 STRING:Q86Y79
PhosphoSite:Q86Y79 DMDM:74750555 PaxDb:Q86Y79 PRIDE:Q86Y79
DNASU:138428 Ensembl:ENST00000419060 Ensembl:ENST00000543175
GeneID:138428 KEGG:hsa:138428 UCSC:uc004bro.3 CTD:138428
GeneCards:GC09M130475 HGNC:HGNC:27039 HPA:HPA021223
neXtProt:NX_Q86Y79 PharmGKB:PA134917129 HOVERGEN:HBG067636
InParanoid:Q86Y79 OrthoDB:EOG4X3H2J PhylomeDB:Q86Y79
GenomeRNAi:138428 NextBio:83788 ArrayExpress:Q86Y79 Bgee:Q86Y79
CleanEx:HS_PTRH1 Genevestigator:Q86Y79 GermOnline:ENSG00000187024
Uniprot:Q86Y79
Length = 214
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 34/130 (26%), Positives = 56/130 (43%)
Query: 17 HCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVX 76
HC A +GDA ++L +P+ MN +G S A + L V + HD++ P G
Sbjct: 71 HCAADLALAPLGDAQLVLLRPRRLMNANGRSVARAAELFGLTAEEVYLVHDELDKPLGRL 130
Query: 77 XXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERID 136
+S ++ N RLR+GIGRP +A +L F+ +E +
Sbjct: 131 ALKLGGSARGHNGVRSCISCLNSNA-MPRLRVGIGRPAHPEAVQAHVLGCFSPAEQELLP 189
Query: 137 TALQEGVEVL 146
L +++
Sbjct: 190 LLLDRATDLI 199
>DICTYBASE|DDB_G0280507 [details] [associations]
symbol:DDB_G0280507 "Peptidyl-tRNA hydrolase"
species:44689 "Dictyostelium discoideum" [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=IEA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
dictyBase:DDB_G0280507 EMBL:AAFI02000036 GO:GO:0004045
eggNOG:COG0193 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 RefSeq:XP_641213.1 ProteinModelPortal:Q54V95
STRING:Q54V95 EnsemblProtists:DDB0205243 GeneID:8622594
KEGG:ddi:DDB_G0280507 InParanoid:Q54V95 Uniprot:Q54V95
Length = 452
Score = 140 (54.3 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 35/111 (31%), Positives = 53/111 (47%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXK 91
V+L KP TYMN SG + Y +PL +LV DD+ GV +
Sbjct: 322 VILLKPMTYMNASGNPLRTIQQKYNVPLQNILVLVDDISTDIGVIKMRTKGGSAGQKGIE 381
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNA----IARERIDTA 138
SV++ G +F+R++ G+G P F+L+KF+ + +E ID A
Sbjct: 382 SVISRL-GTEKFSRIKFGVGVPNAGEIRSNFVLKKFSREKEHLLKESIDKA 431
>UNIPROTKB|E2RR88 [details] [associations]
symbol:PTRH1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0004045 "aminoacyl-tRNA hydrolase activity" evidence=IEA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01196
GO:GO:0005739 GO:GO:0004045 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 OMA:IKFKTGG GeneTree:ENSGT00390000004247
EMBL:AAEX03006864 Ensembl:ENSCAFT00000032028 Uniprot:E2RR88
Length = 215
Score = 128 (50.1 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 34/130 (26%), Positives = 58/130 (44%)
Query: 18 CKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCG-VX 76
C A + DA ++L +P+ MN +G S A + L V + HD++ P G +
Sbjct: 72 CAADLALASLDDAQLVLLRPRRLMNANGRSVARAAELFGLTAEEVYLVHDELDKPLGKLA 131
Query: 77 XXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERID 136
+S ++ + RLR+GIGRP KA++L F+A +E +
Sbjct: 132 LKLGGSSRRGHNGVRSCISCLNSSA-MPRLRVGIGRPTEPDTVKAYVLGCFSAAEQELLP 190
Query: 137 TALQEGVEVL 146
L+ ++L
Sbjct: 191 PLLERATDLL 200
>ZFIN|ZDB-GENE-050306-33 [details] [associations]
symbol:ptrh1 "peptidyl-tRNA hydrolase 1 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01196
ZFIN:ZDB-GENE-050306-33 GO:GO:0004045 eggNOG:COG0193
HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 HOVERGEN:HBG067636
OrthoDB:EOG4X3H2J GeneTree:ENSGT00390000004247 EMBL:BX001023
IPI:IPI00481323 RefSeq:NP_001119866.1 UniGene:Dr.88889
Ensembl:ENSDART00000142927 KEGG:dre:559192 InParanoid:A2BDR2
OMA:GKGLIGD NextBio:20882835 Uniprot:A2BDR2
Length = 266
Score = 131 (51.2 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 36/142 (25%), Positives = 67/142 (47%)
Query: 29 DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXX 88
D ++L +P+ MN++G S A+ Y + +L+ HD++ P G
Sbjct: 109 DVQLVLLRPKLLMNVNGVSVAKAASRYLIQPEHILLIHDELDKPLGKFGIKHGGSARGHN 168
Query: 89 XXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKL 148
+S ++ + + RLRIGIGRP + ++L +F+ + +D+ +++ ++VL
Sbjct: 169 GVRSCVDCLQTD-VMPRLRIGIGRPSDKTPIDRYVLGRFSKEEQNVLDSVIKQSLDVLLD 227
Query: 149 LL--SKGLTESARHFNTIQKYK 168
L S+ T A QK K
Sbjct: 228 YLTDSRSQTSPAEGRRAAQKKK 249
>SGD|S000001232 [details] [associations]
symbol:PTH1 "One of two mitochondrially-localized
peptidyl-tRNA hydrolases" species:4932 "Saccharomyces cerevisiae"
[GO:0004045 "aminoacyl-tRNA hydrolase activity"
evidence=IEA;IGI;IDA] [GO:0032543 "mitochondrial translation"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA;IDA] InterPro:IPR001328
InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195 PROSITE:PS01196
SGD:S000001232 GO:GO:0005739 EMBL:BK006934 GO:GO:0032543
EMBL:U00030 GO:GO:0004045 eggNOG:COG0193 HOGENOM:HOG000004797
KO:K01056 Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178
TIGRFAMs:TIGR00447 KO:K11270 RefSeq:NP_012061.3 GeneID:856598
KEGG:sce:YHR191C RefSeq:NP_012059.3 GeneID:856596 KEGG:sce:YHR189W
GeneTree:ENSGT00390000004247 OrthoDB:EOG4GXJXH PIR:S46683
ProteinModelPortal:P38876 SMR:P38876 DIP:DIP-5239N MINT:MINT-556852
STRING:P38876 PRIDE:P38876 EnsemblFungi:YHR189W CYGD:YHR189w
OMA:KYTLLQS NextBio:982484 Genevestigator:P38876 GermOnline:YHR189W
Uniprot:P38876
Length = 190
Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 34/112 (30%), Positives = 49/112 (43%)
Query: 33 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCG-VXXXXXXXXXXXXXXXK 91
+L YMNLSGE + A Y R +V HD++ + CG V +
Sbjct: 65 ILRSDGQYMNLSGEQVCKVWARYAKYQARHVVIHDELSVACGKVQLRAPSTSIRGHNGLR 124
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQM--DPKAFLLQKFNAIARERIDTALQE 141
S++ G FA+L IGIGR PG DP + A+ + + T L +
Sbjct: 125 SLLKCSGGRVPFAKLAIGIGREPGSRSRDPASVSRWVLGALTPQELQTLLTQ 176
>TIGR_CMR|CJE_0357 [details] [associations]
symbol:CJE_0357 "peptidyl-tRNA hydrolase" species:195099
"Campylobacter jejuni RM1221" [GO:0004045 "aminoacyl-tRNA hydrolase
activity" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0004045 eggNOG:COG0193
HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447
ProtClustDB:PRK05426 RefSeq:YP_178376.1 ProteinModelPortal:Q5HWF9
STRING:Q5HWF9 GeneID:3231119 KEGG:cjr:CJE0357 PATRIC:20042418
OMA:FSSKHNA BioCyc:CJEJ195099:GJC0-362-MONOMER Uniprot:Q5HWF9
Length = 181
Score = 116 (45.9 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 34/112 (30%), Positives = 54/112 (48%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID + + N + K G+ F + +LL KP TYMN SG S + +YK
Sbjct: 25 LIDLLLKESNFT-NLTNSKFK-GELFKIGSSLLLLKPSTYMNNSGLSVKAVNDFYKC--E 80
Query: 61 RVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGR 112
R++V HDD+ + G KS+ + GN ++ R+RIG+G+
Sbjct: 81 RMIVIHDDIDINLGALRFKKGGSSGGHNGLKSI-DTLCGN-DYERVRIGVGK 130
>MGI|MGI:1913779 [details] [associations]
symbol:Ptrh1 "peptidyl-tRNA hydrolase 1 homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 MGI:MGI:1913779 GO:GO:0005739 GO:GO:0004045
eggNOG:COG0193 HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 OMA:FSSKHNA CTD:138428
HOVERGEN:HBG067636 OrthoDB:EOG4X3H2J EMBL:AK075833 EMBL:BC098218
IPI:IPI00225955 RefSeq:NP_848710.1 UniGene:Mm.268037
ProteinModelPortal:Q8BW00 SMR:Q8BW00 STRING:Q8BW00
PhosphoSite:Q8BW00 PaxDb:Q8BW00 PRIDE:Q8BW00
Ensembl:ENSMUST00000066352 GeneID:329384 KEGG:mmu:329384
GeneTree:ENSGT00390000004247 ChiTaRS:PTRH1 NextBio:398724
Bgee:Q8BW00 CleanEx:MM_PTRH1 Genevestigator:Q8BW00
GermOnline:ENSMUSG00000053746 Uniprot:Q8BW00
Length = 204
Score = 116 (45.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 33/149 (22%), Positives = 62/149 (41%)
Query: 1 MIDAFAESQGISMNTVH---CKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL 57
++ A G++ N C A +GDA ++L +P+ MN++G S A + L
Sbjct: 42 VLGQIARRLGVAENWTRDSRCAADLALAPLGDAQLVLLRPRRLMNVNGRSVARAAELFGL 101
Query: 58 PLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQM 117
+ + HD++ P G +S ++ N RL +GIGRP
Sbjct: 102 TAEEIYLVHDELDKPLGKLALKLGGSARGHNGVRSCISCLNSNA-MPRLLVGIGRPTHPN 160
Query: 118 DPKAFLLQKFNAIARERIDTALQEGVEVL 146
+ +L F+ +E + + + ++L
Sbjct: 161 MVENHVLGCFSPEEQELLSPLMDQATDLL 189
>TIGR_CMR|APH_1301 [details] [associations]
symbol:APH_1301 "peptidyl-tRNA hydrolase" species:212042
"Anaplasma phagocytophilum HZ" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0004045
eggNOG:COG0193 HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447
RefSeq:YP_505815.1 ProteinModelPortal:Q2GII6 STRING:Q2GII6
GeneID:3930906 KEGG:aph:APH_1301 PATRIC:20951398 OMA:GDESGFM
ProtClustDB:PRK05426 BioCyc:APHA212042:GHPM-1303-MONOMER
Uniprot:Q2GII6
Length = 183
Score = 104 (41.7 bits), Expect = 0.00019, P = 0.00019
Identities = 30/108 (27%), Positives = 48/108 (44%)
Query: 25 GFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXX 84
G +G V+L KP YMN SG S + +K+ + VFHDD+ L G
Sbjct: 49 GNIGTHRVMLMKPLLYMNRSGTSVLSCTSMHKIAPEHITVFHDDVELQPGTIRVKLGGGS 108
Query: 85 XXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIAR 132
+S+ + + + R+R G+GR + ++L F IA+
Sbjct: 109 GGHNGLRSIDSAI--GKAYWRVRFGVGRAE-LCNLSDYVLSDFENIAQ 153
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.138 0.406 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 177 162 0.00079 107 3 11 22 0.48 31
30 0.44 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 28
No. of states in DFA: 561 (60 KB)
Total size of DFA: 131 KB (2083 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.52u 0.15s 13.67t Elapsed: 00:00:01
Total cpu time: 13.52u 0.15s 13.67t Elapsed: 00:00:01
Start: Sat May 11 02:05:07 2013 End: Sat May 11 02:05:08 2013