BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030459
(177 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449452694|ref|XP_004144094.1| PREDICTED: peptidyl-tRNA hydrolase, mitochondrial-like [Cucumis
sativus]
Length = 218
Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 151/177 (85%), Positives = 156/177 (88%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MID FAES GISMN VHCKA FG+GFVGD PV LAKPQTYMNLSGES GPLAAYYKLPLN
Sbjct: 42 MIDVFAESIGISMNRVHCKAVFGEGFVGDIPVFLAKPQTYMNLSGESAGPLAAYYKLPLN 101
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
RVLVFHDDM LPCGVLRL+HNGGHG HNGLKSV+ +FRGNREFARLRIGIGRPPGQMDPK
Sbjct: 102 RVLVFHDDMNLPCGVLRLQHNGGHGYHNGLKSVIYHFRGNREFARLRIGIGRPPGQMDPK 161
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHIRLQNMPA 177
AFLLQKFN A+ERIDTALQEGV LKLLLS L ESARHFN QKYKHIRLQ MP
Sbjct: 162 AFLLQKFNNTAQERIDTALQEGVGALKLLLSHSLFESARHFNHEQKYKHIRLQTMPV 218
>gi|449493540|ref|XP_004159339.1| PREDICTED: peptidyl-tRNA hydrolase, mitochondrial-like [Cucumis
sativus]
Length = 218
Score = 308 bits (789), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 150/177 (84%), Positives = 156/177 (88%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MID FAES GI MN VHCKA FG+GFVGD PV LAKPQTYMNLSGES GPLAAYYKLPLN
Sbjct: 42 MIDVFAESVGIPMNRVHCKAVFGEGFVGDIPVFLAKPQTYMNLSGESAGPLAAYYKLPLN 101
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
RVLVFHDDM LPCGVLRL+HNGGHG HNGLKSV+++FRGNREFARLRIGIGRPPGQMDPK
Sbjct: 102 RVLVFHDDMTLPCGVLRLQHNGGHGYHNGLKSVISHFRGNREFARLRIGIGRPPGQMDPK 161
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHIRLQNMPA 177
AFLLQKFN A+ERIDTALQEGV LKLLLS L ESARHFN QKYKHIRLQ MP
Sbjct: 162 AFLLQKFNNTAQERIDTALQEGVGALKLLLSHSLFESARHFNHEQKYKHIRLQTMPV 218
>gi|449493552|ref|XP_004159345.1| PREDICTED: peptidyl-tRNA hydrolase, mitochondrial-like [Cucumis
sativus]
Length = 218
Score = 306 bits (783), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 149/177 (84%), Positives = 155/177 (87%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MID FAES GISMN VHCKA FG+GFVGD PV LAKPQTYMNLSGES GPLAAYYKLPLN
Sbjct: 42 MIDVFAESIGISMNRVHCKAVFGEGFVGDVPVFLAKPQTYMNLSGESAGPLAAYYKLPLN 101
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
RVLVFHDDM LPCGVLRL+HNGGH H GLKSV+ +FRGNREFARLRIGIGRPPGQMD K
Sbjct: 102 RVLVFHDDMNLPCGVLRLQHNGGHDYHKGLKSVIYHFRGNREFARLRIGIGRPPGQMDSK 161
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHIRLQNMPA 177
AFLLQKFN A+ERIDTALQEGV LKLLLS GL+ESARHFN QKYKHIRLQ MP
Sbjct: 162 AFLLQKFNNTAQERIDTALQEGVGALKLLLSHGLSESARHFNHKQKYKHIRLQTMPV 218
>gi|449452658|ref|XP_004144076.1| PREDICTED: peptidyl-tRNA hydrolase, mitochondrial-like [Cucumis
sativus]
Length = 218
Score = 305 bits (781), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 149/177 (84%), Positives = 155/177 (87%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MID FAES GISMN VHCKA FG+GFVGD PV LAKPQTYMNLSGES GPLAAYYKLPLN
Sbjct: 42 MIDVFAESIGISMNRVHCKAVFGEGFVGDIPVFLAKPQTYMNLSGESAGPLAAYYKLPLN 101
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
RVLVFHDDM LPCGVLRL+HNGGH H GLKSV+ +FRGNREFARLRIGIGRPPGQMD K
Sbjct: 102 RVLVFHDDMNLPCGVLRLQHNGGHDYHKGLKSVIYHFRGNREFARLRIGIGRPPGQMDSK 161
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHIRLQNMPA 177
AFLLQKFN A+ERIDTALQEGV LKLLLS GL+ESARHFN QKYKHIRLQ MP
Sbjct: 162 AFLLQKFNNTAQERIDTALQEGVGALKLLLSHGLSESARHFNHKQKYKHIRLQTMPV 218
>gi|225435751|ref|XP_002283606.1| PREDICTED: peptidyl-tRNA hydrolase, mitochondrial [Vitis vinifera]
gi|297746470|emb|CBI16526.3| unnamed protein product [Vitis vinifera]
Length = 217
Score = 304 bits (779), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 148/175 (84%), Positives = 156/175 (89%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MI+AFAESQGI M+TVHCKA FGQGFV PV LAKPQTYMNLSGES GPLAAYYKLPLN
Sbjct: 41 MINAFAESQGIPMDTVHCKAIFGQGFVDAVPVFLAKPQTYMNLSGESAGPLAAYYKLPLN 100
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
RV+VFHDDM LPCGVLRL H GGHG HNGLKSV+ +FRGNREF RLRIGIG+PPGQMDPK
Sbjct: 101 RVVVFHDDMSLPCGVLRLHHKGGHGNHNGLKSVIYHFRGNREFPRLRIGIGKPPGQMDPK 160
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHIRLQNM 175
AFLLQKF+A ARERID ALQEGV VLKLL SKGLTESAR FNT QKYKHIR+QNM
Sbjct: 161 AFLLQKFSATARERIDAALQEGVGVLKLLSSKGLTESARCFNTEQKYKHIRVQNM 215
>gi|358248836|ref|NP_001239948.1| uncharacterized protein LOC100808506 [Glycine max]
gi|255645293|gb|ACU23143.1| unknown [Glycine max]
Length = 218
Score = 300 bits (767), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 143/177 (80%), Positives = 155/177 (87%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MIDAFAESQGI M+TVH KA FG+GFVG+ PV LAKPQTYMNLSGESTGPLAAYYKLPLN
Sbjct: 41 MIDAFAESQGIPMDTVHSKAIFGKGFVGEVPVFLAKPQTYMNLSGESTGPLAAYYKLPLN 100
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+VLVFHDDM LPCGVLRL GGHG H GLKSV+ NFRGNREF RLRIGIG PPGQMDPK
Sbjct: 101 QVLVFHDDMNLPCGVLRLHDKGGHGSHKGLKSVIYNFRGNREFPRLRIGIGSPPGQMDPK 160
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHIRLQNMPA 177
AFLLQKFN AR+RID ALQEG++ LKLLLSKGLTESA+ FN QKYKH+R+QN+P
Sbjct: 161 AFLLQKFNVTARQRIDEALQEGIDALKLLLSKGLTESAKRFNKEQKYKHLRVQNLPV 217
>gi|356512501|ref|XP_003524957.1| PREDICTED: peptidyl-tRNA hydrolase, mitochondrial-like [Glycine
max]
Length = 217
Score = 289 bits (739), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 139/177 (78%), Positives = 152/177 (85%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MIDAFAESQGI M+TVH KA G+GFVG+ PV LAKPQTYMNLSGESTGPLAAYYKLPLN
Sbjct: 41 MIDAFAESQGIPMDTVHSKAISGKGFVGEVPVFLAKPQTYMNLSGESTGPLAAYYKLPLN 100
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+VLVFHDDM LPCGVLRL GGHG H GLKSV+ +F+GNREF RLRIGIG PPGQMDPK
Sbjct: 101 QVLVFHDDMNLPCGVLRLHDKGGHGSHKGLKSVIYHFKGNREFPRLRIGIGSPPGQMDPK 160
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHIRLQNMPA 177
AFLLQKFN AR+RID ALQEGV+ LKLLLSKGL SA+ FN QKYKH+R+QN+P
Sbjct: 161 AFLLQKFNVTARQRIDEALQEGVDALKLLLSKGLAVSAKRFNKEQKYKHLRVQNLPV 217
>gi|224052908|ref|XP_002297632.1| predicted protein [Populus trichocarpa]
gi|222844890|gb|EEE82437.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 285 bits (729), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 139/175 (79%), Positives = 150/175 (85%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MIDAFA S GISMN CKA FG+GFVGDAPVLLAKPQTYMNLSGES GPLAAYYKLPLN
Sbjct: 46 MIDAFAGSLGISMNIPLCKALFGEGFVGDAPVLLAKPQTYMNLSGESAGPLAAYYKLPLN 105
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
RV+VFHDDM LPCGVLRL+ GGHG H GLKSV+N+FRGNREFARLRIGIGRPPGQMDPK
Sbjct: 106 RVIVFHDDMELPCGVLRLQEKGGHGCHRGLKSVINHFRGNREFARLRIGIGRPPGQMDPK 165
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHIRLQNM 175
AFLLQKFNA ARERID AL EGV L+ +L +GLT +AR FN QKYK+IR + M
Sbjct: 166 AFLLQKFNATARERIDAALPEGVVALRCILFEGLTRTARWFNQEQKYKYIRSETM 220
>gi|255582564|ref|XP_002532065.1| peptidyl-tRNA hydrolase, putative [Ricinus communis]
gi|223528269|gb|EEF30320.1| peptidyl-tRNA hydrolase, putative [Ricinus communis]
Length = 217
Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 136/177 (76%), Positives = 151/177 (85%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MIDAFA+ I M+ +H KA FG+GFVG+A VLLAKPQTYMNLSGES GPLAAYYKLPLN
Sbjct: 41 MIDAFAQLLQIPMDKLHSKAIFGEGFVGEASVLLAKPQTYMNLSGESAGPLAAYYKLPLN 100
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
RV+V HDDM LPCGVLRL+ GGHG HNGLKSV+++FRGNREFARLRIGIGRPPGQMDPK
Sbjct: 101 RVIVLHDDMDLPCGVLRLQPKGGHGSHNGLKSVIHHFRGNREFARLRIGIGRPPGQMDPK 160
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHIRLQNMPA 177
AFLLQKFNA A++RIDTA+ EG LK +L KGLTE+AR FN QKYKHIRLQ MP
Sbjct: 161 AFLLQKFNATAQKRIDTAIPEGAAALKSILFKGLTETARCFNQEQKYKHIRLQTMPT 217
>gi|297808049|ref|XP_002871908.1| aminoacyl-tRNA hydrolase [Arabidopsis lyrata subsp. lyrata]
gi|297317745|gb|EFH48167.1| aminoacyl-tRNA hydrolase [Arabidopsis lyrata subsp. lyrata]
Length = 218
Score = 273 bits (697), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/177 (76%), Positives = 146/177 (82%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MID FAES GI MN V+ KA GQGFV D PV+LAKPQTYMNLSGES+GPLAAYYKLPLN
Sbjct: 41 MIDVFAESVGIQMNLVNFKAIMGQGFVDDLPVILAKPQTYMNLSGESSGPLAAYYKLPLN 100
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
RVLV HDDM LPCGVLRL+ GGHG HNGLKSVMN+FRGNREFARLRIGIG PPGQMDPK
Sbjct: 101 RVLVVHDDMQLPCGVLRLQEKGGHGCHNGLKSVMNHFRGNREFARLRIGIGNPPGQMDPK 160
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHIRLQNMPA 177
AFLLQKF+ ARER+D AL EGV+ LKL+LSK ES R FN QKYKH+R + A
Sbjct: 161 AFLLQKFSVPARERMDKALAEGVDALKLVLSKDFGESWRLFNVEQKYKHLRQHTIIA 217
>gi|79517018|ref|NP_197484.4| Peptidyl-tRNA hydrolase [Arabidopsis thaliana]
gi|75291353|sp|Q6NLS8.1|PTHM_ARATH RecName: Full=Peptidyl-tRNA hydrolase, mitochondrial; AltName:
Full=M-PTH; AltName: Full=Mitochondrial CRS2-like
protein; AltName: Full=Mitochondrial RNA splicing
factor; Flags: Precursor
gi|44681342|gb|AAS47611.1| At5g19830 [Arabidopsis thaliana]
gi|45773870|gb|AAS76739.1| At5g19830 [Arabidopsis thaliana]
gi|110735763|dbj|BAE99859.1| peptidyl tRNA hydrolases-like putative protein [Arabidopsis
thaliana]
gi|332005370|gb|AED92753.1| Peptidyl-tRNA hydrolase [Arabidopsis thaliana]
Length = 219
Score = 272 bits (695), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 132/171 (77%), Positives = 145/171 (84%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MID FAES GI MN V+ KA GQGFV D PV+LAKPQTYMNLSGES+GPLAAYYKLPLN
Sbjct: 42 MIDVFAESVGIQMNLVNFKAIMGQGFVADLPVILAKPQTYMNLSGESSGPLAAYYKLPLN 101
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
RVLV HDDM LPCGVLRL+ GGHG HNGLKSVMN+FRGNREFARLRIGIG+PPGQMDPK
Sbjct: 102 RVLVVHDDMQLPCGVLRLQEKGGHGCHNGLKSVMNHFRGNREFARLRIGIGKPPGQMDPK 161
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHIR 171
AFLLQKF+ ARER+D AL EGV+ LKL+L+K ES R FN QKYKH++
Sbjct: 162 AFLLQKFSMPARERMDKALAEGVDALKLVLAKDFGESWRLFNVEQKYKHLK 212
>gi|224052914|ref|XP_002297633.1| predicted protein [Populus trichocarpa]
gi|222844891|gb|EEE82438.1| predicted protein [Populus trichocarpa]
Length = 210
Score = 271 bits (694), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 131/165 (79%), Positives = 142/165 (86%)
Query: 11 ISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMG 70
ISMN CKA FG+GFVGDAPVLLAKPQTYMNLSGES GPLAAYYKLPLNRV+VFHDDM
Sbjct: 44 ISMNIPLCKALFGEGFVGDAPVLLAKPQTYMNLSGESAGPLAAYYKLPLNRVIVFHDDME 103
Query: 71 LPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAI 130
LPCGVLRL+ GGHG H GLKSV+N+FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNA
Sbjct: 104 LPCGVLRLQEKGGHGCHRGLKSVINHFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAT 163
Query: 131 ARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHIRLQNM 175
ARERID AL EGV L+ +L +GLT +AR FN QKYK+IR + M
Sbjct: 164 ARERIDAALPEGVVALRCILFEGLTRTARWFNQEQKYKYIRSETM 208
>gi|326507536|dbj|BAK03161.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 237
Score = 251 bits (641), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 121/170 (71%), Positives = 142/170 (83%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MIDAFAESQGIS+ T H KA FG+G V PVLLAKPQTY+NLSGES G LAAYYKLPL+
Sbjct: 61 MIDAFAESQGISLTTHHFKALFGEGVVDGVPVLLAKPQTYINLSGESAGALAAYYKLPLH 120
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
RV+V +DD LPCGVLRL+ GG+G HNGLKSV+ +FR NREF RLRIGIGRPPGQMDPK
Sbjct: 121 RVIVAYDDTDLPCGVLRLQPKGGYGRHNGLKSVIYHFRKNREFGRLRIGIGRPPGQMDPK 180
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHI 170
AF+LQKFN RERID+A++EG +LK++++KGLTE+AR N QKYKH+
Sbjct: 181 AFVLQKFNKTGRERIDSAIKEGCGILKMVVTKGLTEAARVSNVDQKYKHL 230
>gi|414866788|tpg|DAA45345.1| TPA: hypothetical protein ZEAMMB73_274141 [Zea mays]
Length = 239
Score = 251 bits (641), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 122/171 (71%), Positives = 142/171 (83%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MIDAFA+SQGI + T + KA FG+G V PVLLAKPQTYMNLSGES GPLAAYYKLPLN
Sbjct: 60 MIDAFAQSQGIPLTTHYFKALFGEGMVDGVPVLLAKPQTYMNLSGESVGPLAAYYKLPLN 119
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
RVLV DDM LPCGVLRL+ GG G HNGLKSV+ +FR NREF RLRIGIGRP GQMDPK
Sbjct: 120 RVLVAFDDMDLPCGVLRLQPKGGSGRHNGLKSVIYHFRKNREFCRLRIGIGRPAGQMDPK 179
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHIR 171
AF+LQKFN RERID+A++EGV++LK++ ++GLTE+A+ N QKYKH+R
Sbjct: 180 AFVLQKFNRTGRERIDSAVREGVDILKMVAARGLTEAAKLTNADQKYKHLR 230
>gi|357112247|ref|XP_003557921.1| PREDICTED: peptidyl-tRNA hydrolase, mitochondrial-like
[Brachypodium distachyon]
Length = 234
Score = 249 bits (635), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 118/170 (69%), Positives = 141/170 (82%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MIDAFA+SQGIS+ T H KA FG+G V PVLLAKPQTY+NLSGES G LAAYYKLPLN
Sbjct: 58 MIDAFAQSQGISLTTHHFKALFGEGMVDGVPVLLAKPQTYINLSGESAGALAAYYKLPLN 117
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
RVLV +DD LPCGVLRL+ GG+G HNGLKSV+ +FR NREF RLRIGIGRPPGQMDP+
Sbjct: 118 RVLVAYDDTDLPCGVLRLQPKGGYGRHNGLKSVIYHFRKNREFGRLRIGIGRPPGQMDPR 177
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHI 170
AF+LQKFN RERID+A++EG ++LK+++ +G+TE+ R N QKYKH+
Sbjct: 178 AFVLQKFNKTGRERIDSAMKEGADILKMVVIRGVTEAGRLSNADQKYKHL 227
>gi|219363585|ref|NP_001137055.1| uncharacterized protein LOC100217227 [Zea mays]
gi|194698178|gb|ACF83173.1| unknown [Zea mays]
Length = 239
Score = 249 bits (635), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 121/171 (70%), Positives = 141/171 (82%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MIDAFA+SQGI + T + KA G+G V PVLLAKPQTYMNLSGES GPLAAYYKLPLN
Sbjct: 60 MIDAFAQSQGIPLTTHYFKALLGEGMVDGVPVLLAKPQTYMNLSGESVGPLAAYYKLPLN 119
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
RVLV DDM LPCGVLRL+ GG G HNGLKSV+ +FR NREF RLRIGIGRP GQMDPK
Sbjct: 120 RVLVAFDDMDLPCGVLRLQPKGGSGRHNGLKSVIYHFRKNREFCRLRIGIGRPAGQMDPK 179
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHIR 171
AF+LQKFN RERID+A++EGV++LK++ ++GLTE+A+ N QKYKH+R
Sbjct: 180 AFVLQKFNRTGRERIDSAVREGVDILKMVAARGLTEAAKLTNADQKYKHLR 230
>gi|125543850|gb|EAY89989.1| hypothetical protein OsI_11554 [Oryza sativa Indica Group]
gi|125586236|gb|EAZ26900.1| hypothetical protein OsJ_10828 [Oryza sativa Japonica Group]
Length = 274
Score = 246 bits (629), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 124/189 (65%), Positives = 144/189 (76%), Gaps = 14/189 (7%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MID FA+SQGIS+ KA FG+G V PVLLAKPQTYMNLSGES GPLAAYYKLPLN
Sbjct: 84 MIDMFAQSQGISLTRHPFKALFGEGMVEGVPVLLAKPQTYMNLSGESVGPLAAYYKLPLN 143
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNG--------------LKSVMNNFRGNREFARL 106
RVLV DDM LPCGVLRL+ GG+G HNG +KS++ +FR NREF RL
Sbjct: 144 RVLVAFDDMDLPCGVLRLQPKGGYGRHNGSVDFIIMCFNELIRVKSLIYHFRKNREFGRL 203
Query: 107 RIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 166
RIGIGRPPGQMDPKAF+LQKFN RERID+A++EGVE+LKL+++KGLTE+AR N QK
Sbjct: 204 RIGIGRPPGQMDPKAFVLQKFNKTGRERIDSAIEEGVEILKLVVTKGLTEAARSSNVDQK 263
Query: 167 YKHIRLQNM 175
YKH+ +M
Sbjct: 264 YKHLTTHDM 272
>gi|255642567|gb|ACU21547.1| unknown [Glycine max]
Length = 202
Score = 244 bits (624), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 118/159 (74%), Positives = 130/159 (81%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MIDA AESQGI M+TVH KA G+GFVG+ PV LAKPQTYMNLSGES GPLAAYYKLPLN
Sbjct: 41 MIDALAESQGIPMDTVHSKAISGKGFVGEVPVFLAKPQTYMNLSGESAGPLAAYYKLPLN 100
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+VLVFHDDM LPCGVLRL GGHG H GLKSV+ +F+GNREF RLRIGIG PPGQMDPK
Sbjct: 101 QVLVFHDDMNLPCGVLRLHDKGGHGSHKGLKSVIYHFKGNREFPRLRIGIGSPPGQMDPK 160
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 159
AFLLQKFN AR+RID ALQEGV+ L + + +E R
Sbjct: 161 AFLLQKFNVTARQRIDEALQEGVDALSSFIQRFGSECKR 199
>gi|357166670|ref|XP_003580792.1| PREDICTED: peptidyl-tRNA hydrolase, mitochondrial-like
[Brachypodium distachyon]
Length = 239
Score = 241 bits (616), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 120/170 (70%), Positives = 141/170 (82%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MIDAFA+SQGI + T H KA FG+G V PVLLAKPQTY+NLSGES LAAYYKLPL+
Sbjct: 62 MIDAFAQSQGIPLTTHHFKALFGEGMVDGVPVLLAKPQTYINLSGESAAALAAYYKLPLH 121
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
RVLV +DD LPCGVLRL+ GG G HNGLKSV+ +FR NREF RLRIGIGRPPGQMDPK
Sbjct: 122 RVLVAYDDTDLPCGVLRLQPKGGSGRHNGLKSVIYHFRKNREFGRLRIGIGRPPGQMDPK 181
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHI 170
AF+LQKFN ARERID+ ++EGV++LK++++KGLTE+AR N QKYKH+
Sbjct: 182 AFVLQKFNKTARERIDSGIKEGVDILKMVVTKGLTEAARVSNVNQKYKHL 231
>gi|242040937|ref|XP_002467863.1| hypothetical protein SORBIDRAFT_01g035470 [Sorghum bicolor]
gi|241921717|gb|EER94861.1| hypothetical protein SORBIDRAFT_01g035470 [Sorghum bicolor]
Length = 241
Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 110/177 (62%), Positives = 135/177 (76%), Gaps = 2/177 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MIDAFA+SQGI + T + KA FG+G V PVL+AKPQTYMNLSGES GPLAAYYKLPLN
Sbjct: 60 MIDAFAQSQGIPLTTHYFKALFGEGMVDGVPVLIAKPQTYMNLSGESVGPLAAYYKLPLN 119
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARL--RIGIGRPPGQMD 118
RVLV DDM LPCGVLRL+ GG G HNG+ ++ N+ +F +GIGRPPGQMD
Sbjct: 120 RVLVAFDDMDLPCGVLRLQPKGGFGRHNGILNLCNSTLPCVDFWNFFSLVGIGRPPGQMD 179
Query: 119 PKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHIRLQNM 175
PKAF+LQKFN RERID+A++EGV +LK++ ++GLTE+AR N QKYK +R ++
Sbjct: 180 PKAFVLQKFNRTGRERIDSAIREGVNILKMVATRGLTEAARLSNADQKYKLLRSHDI 236
>gi|162461597|ref|NP_001104963.1| chloroplastic group IIB intron splicing facilitator CRS2,
chloroplastic precursor [Zea mays]
gi|75312019|sp|Q9M5P4.1|CRS2_MAIZE RecName: Full=Chloroplastic group IIB intron splicing facilitator
CRS2, chloroplastic; AltName: Full=Chloroplastic RNA
splicing factor 2; AltName: Full=Protein CHLOROPLAST RNA
SPLICING 2; Flags: Precursor
gi|6752919|gb|AAF27939.1|AF225708_1 CRS2 [Zea mays]
Length = 256
Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 94/172 (54%), Positives = 128/172 (74%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
M+D A +GI+MNT+ K+ G G +G+ PVL+ KPQ+YMN SGE+ GPLAAYY++PL
Sbjct: 85 MVDRIAAEEGITMNTIQSKSLLGIGSIGEVPVLVVKPQSYMNYSGEAIGPLAAYYQVPLR 144
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+L+ +DD LP GVLRL+ GGHG HNGL++V+ + G REF RL IGIG PPG+MDP+
Sbjct: 145 HILLIYDDTSLPNGVLRLQKKGGHGRHNGLQNVIEHLDGRREFPRLSIGIGSPPGKMDPR 204
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHIRL 172
AFLLQKF++ R +IDTAL++GV+ ++ L+ KG + S FN +QKYK R+
Sbjct: 205 AFLLQKFSSEERVQIDTALEQGVDAVRTLVLKGFSGSTERFNLVQKYKFHRV 256
>gi|194698704|gb|ACF83436.1| unknown [Zea mays]
gi|413947310|gb|AFW79959.1| chloroplast RNA splicing2 [Zea mays]
Length = 256
Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 94/172 (54%), Positives = 128/172 (74%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
M+D A +GI+MNT+ K+ G G +G+ PVL+ KPQ+YMN SGE+ GPLAAYY++PL
Sbjct: 85 MVDRIAAEEGITMNTIQSKSLLGIGSIGEVPVLVVKPQSYMNYSGEAIGPLAAYYQVPLR 144
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+L+ +DD LP GVLRL+ GGHG HNGL++V+ + G REF RL IGIG PPG+MDP+
Sbjct: 145 HILLIYDDTSLPNGVLRLQKKGGHGRHNGLQNVIEHLDGRREFPRLSIGIGSPPGKMDPR 204
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHIRL 172
AFLLQKF++ R +IDTAL++GV+ ++ L+ KG + S FN +QKYK R+
Sbjct: 205 AFLLQKFSSEERVQIDTALEQGVDAVRTLVLKGFSGSTERFNLVQKYKFHRV 256
>gi|356513117|ref|XP_003525260.1| PREDICTED: peptidyl-tRNA hydrolase, chloroplastic [Glycine max]
Length = 259
Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 95/169 (56%), Positives = 126/169 (74%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
M+D AE++GISM TV K+ FG+GF+GD PV+LAKPQTYMN SGES G + +YYK+PL
Sbjct: 89 MVDTIAEAEGISMTTVSFKSLFGKGFIGDVPVILAKPQTYMNSSGESVGAIVSYYKIPLK 148
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+VLV DD+ LP LRL GGHGGHNG+KSV+N+F+GN F RLRIGIGRPPG+MDP
Sbjct: 149 QVLVIFDDLDLPFAKLRLLPKGGHGGHNGMKSVINHFKGNSGFPRLRIGIGRPPGKMDPV 208
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKH 169
AF+L+ F RE ++ LQ+G+E +++LL +G +SA N+ +K +
Sbjct: 209 AFVLRTFTKHEREELNFTLQDGLEAVRILLLEGFDKSATFVNSAKKIEQ 257
>gi|242056565|ref|XP_002457428.1| hypothetical protein SORBIDRAFT_03g007130 [Sorghum bicolor]
gi|241929403|gb|EES02548.1| hypothetical protein SORBIDRAFT_03g007130 [Sorghum bicolor]
Length = 256
Score = 206 bits (523), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 125/168 (74%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
M+D A +GI+MNT+ K+ G G +G+ PVL+ KPQ+YMN SGE+ GPLAAYY++PL
Sbjct: 85 MVDRIAGEEGITMNTIQSKSLLGIGSIGEVPVLVVKPQSYMNYSGEAIGPLAAYYQVPLR 144
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+L+ +DDM LP GVLRL+ GGHG HNGL++V+ N G REF RL IGIG PPG+MDP+
Sbjct: 145 HILLIYDDMSLPNGVLRLQKKGGHGRHNGLQNVIENLDGRREFPRLSIGIGSPPGKMDPR 204
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYK 168
AFLLQKF++ R +ID +L++GV+ ++ L+ KG S FN +QKYK
Sbjct: 205 AFLLQKFSSEERVQIDASLEQGVDAVRTLVLKGFCGSTERFNLVQKYK 252
>gi|294462383|gb|ADE76740.1| unknown [Picea sitchensis]
Length = 256
Score = 204 bits (520), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 94/174 (54%), Positives = 132/174 (75%), Gaps = 3/174 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MID A+++GIS++ + C+A FG+G + +PV+LAKPQT+MN SGES GPL AYYK+PLN
Sbjct: 85 MIDTIAQAEGISVSRIQCRALFGKGHINGSPVMLAKPQTFMNASGESVGPLVAYYKIPLN 144
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+VL+ DDM LP LRL GGHGGHNG+KSV+++F+GNREF RLRIGIGRPPG+MDP
Sbjct: 145 QVLLIFDDMDLPFAKLRLLPKGGHGGHNGMKSVIDHFKGNREFPRLRIGIGRPPGKMDPI 204
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHIRLQN 174
+++L+ F +E +D LQ+G++ +++L+++G +SA N QK R+QN
Sbjct: 205 SYVLRPFTKGEQEELDLTLQDGLDAIRILINQGFDKSATIVNRAQK---ARIQN 255
>gi|40889731|pdb|1RYM|A Chain A, Structure Of The Group Ii Intron Splicing Factor Crs2
Length = 212
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 94/172 (54%), Positives = 127/172 (73%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
M+D A +GI+MNT K+ G G +G+ PVL+ KPQ+YMN SGE+ GPLAAYY++PL
Sbjct: 41 MVDRIAAEEGITMNTEQSKSLLGIGSIGEVPVLVVKPQSYMNYSGEAIGPLAAYYQVPLR 100
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+L+ +DD LP GVLRL+ GGHG HNGL++V+ + G REF RL IGIG PPG+MDP+
Sbjct: 101 HILLIYDDTSLPNGVLRLQKKGGHGRHNGLQNVIEHLDGRREFPRLSIGIGSPPGKMDPR 160
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHIRL 172
AFLLQKF++ R +IDTAL++GV+ ++ L+ KG + S FN +QKYK R+
Sbjct: 161 AFLLQKFSSEERVQIDTALEQGVDAVRTLVLKGFSGSTERFNLVQKYKFHRV 212
>gi|449455782|ref|XP_004145630.1| PREDICTED: chloroplastic group IIB intron splicing facilitator
CRS2-B, chloroplastic-like [Cucumis sativus]
gi|449519774|ref|XP_004166909.1| PREDICTED: chloroplastic group IIB intron splicing facilitator
CRS2-B, chloroplastic-like [Cucumis sativus]
Length = 249
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/169 (57%), Positives = 125/169 (73%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MID+ A++QGI MNT+ KA G G +G+ P+LLAKPQTYMN GES GPLAA+Y++PL
Sbjct: 78 MIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLR 137
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
VL+ +D+M LP GVLRL+ GHG HNG+KSVM + G REF RL IGIG PPG MD K
Sbjct: 138 HVLLTYDEMNLPNGVLRLQPKAGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMK 197
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKH 169
AFLLQKF+++ R++ID AL++GVE ++ L G ++ FN QKYK+
Sbjct: 198 AFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQRVNRFNLSQKYKY 246
>gi|255631022|gb|ACU15875.1| unknown [Glycine max]
Length = 228
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 94/169 (55%), Positives = 125/169 (73%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
M+D AE++GISM TV K+ FG+GF+GD PV+LAKPQTYMN SGES G + +YYK+PL
Sbjct: 53 MVDTIAEAEGISMTTVSFKSLFGKGFIGDVPVILAKPQTYMNSSGESVGAIVSYYKIPLK 112
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+VL DD+ LP LRL GGHGGHNG+KSV+N+F+GN F RLRIGIGRPPG+MDP
Sbjct: 113 QVLEIFDDLDLPFAKLRLLPKGGHGGHNGVKSVINHFKGNSGFPRLRIGIGRPPGKMDPV 172
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKH 169
AF+L+ F RE ++ LQ+G+E +++LL +G +SA N+ +K +
Sbjct: 173 AFVLRTFTKHEREELNFTLQDGLEAVRILLLEGFDKSATFVNSAKKIEQ 221
>gi|224079329|ref|XP_002305823.1| predicted protein [Populus trichocarpa]
gi|222848787|gb|EEE86334.1| predicted protein [Populus trichocarpa]
Length = 244
Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 95/169 (56%), Positives = 124/169 (73%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MID A+++G+ MNT+ KA G G +G+ P+LLAKPQ YMN SGES GPLAA+YK+PL
Sbjct: 73 MIDRIAQAEGVLMNTIQSKALIGIGCIGEVPILLAKPQAYMNFSGESVGPLAAHYKIPLR 132
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+L+ +D+M LP G+LR++ GGHG HNG+KSVM++ G REF RL IGIG PPG MD K
Sbjct: 133 HILLIYDEMNLPNGILRVQPKGGHGHHNGVKSVMDHLDGCREFPRLCIGIGNPPGTMDMK 192
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKH 169
AFLLQKF+ RE+ID +L++GVE ++ L+ G T FN QKYK+
Sbjct: 193 AFLLQKFSPTEREQIDASLEQGVEAMRTLILGGFTNKITRFNLGQKYKY 241
>gi|116783352|gb|ABK22906.1| unknown [Picea sitchensis]
Length = 246
Score = 201 bits (512), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 89/169 (52%), Positives = 129/169 (76%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MID+ A+++GIS+N + K+ G+G++ + PVLLAKPQTY+NL+GES G LA YY++P
Sbjct: 75 MIDSIAKAEGISLNAIQSKSLIGKGYICNTPVLLAKPQTYINLTGESVGSLAVYYRIPFQ 134
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+L+ D M LP G+LR++ GGHG HNG+KSV+N+ +GNR F RL IGIG PPG MD K
Sbjct: 135 HILLMFDMMELPSGILRIQAKGGHGLHNGVKSVINHLKGNRNFPRLCIGIGNPPGSMDSK 194
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKH 169
A++LQ+F+ + RE+++ +LQEGV+ +LL+S+G ++S FN QKYK+
Sbjct: 195 AYVLQQFSTMEREKMNISLQEGVDATRLLISEGFSQSIDGFNKRQKYKY 243
>gi|357520293|ref|XP_003630435.1| Chloroplastic group IIB intron splicing facilitator CRS2-B
[Medicago truncatula]
gi|355524457|gb|AET04911.1| Chloroplastic group IIB intron splicing facilitator CRS2-B
[Medicago truncatula]
Length = 243
Score = 201 bits (511), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 93/172 (54%), Positives = 128/172 (74%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID+ ++SQGI MNT+ KA G G +G+ PVLLAKPQTYMN SGES GPLAAYY++PL
Sbjct: 72 IIDSLSQSQGILMNTIQSKALIGIGSIGEVPVLLAKPQTYMNFSGESVGPLAAYYRVPLR 131
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV +D+ LP GVL+L+ GGHG HNGLK+V+ + G+R+F RL IGIG PPG MD +
Sbjct: 132 HILVVYDETSLPSGVLKLQPKGGHGHHNGLKNVIGHLDGSRDFPRLAIGIGNPPGTMDLR 191
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHIRL 172
AFLLQKF+++ R+++D +L++GV+ ++ L+ G FN QKYK+ R+
Sbjct: 192 AFLLQKFSSVERKQVDESLEQGVQAVRTLVLNGFNHHVNRFNLGQKYKYNRV 243
>gi|115434354|ref|NP_001041935.1| Os01g0132800 [Oryza sativa Japonica Group]
gi|75288538|sp|Q5ZCL8.1|CRS2_ORYSJ RecName: Full=Chloroplastic group IIB intron splicing facilitator
CRS2, chloroplastic; AltName: Full=CRS2-like protein;
AltName: Full=Chloroplastic RNA splicing factor 2;
Flags: Precursor
gi|53792159|dbj|BAD52792.1| putative peptidyl-tRNA hydrolase [Oryza sativa Japonica Group]
gi|113531466|dbj|BAF03849.1| Os01g0132800 [Oryza sativa Japonica Group]
gi|215687059|dbj|BAG90905.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222617682|gb|EEE53814.1| hypothetical protein OsJ_00257 [Oryza sativa Japonica Group]
Length = 259
Score = 201 bits (511), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 92/168 (54%), Positives = 124/168 (73%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
M+D A +GI+MNT+ K+ G G +G+ PVLL KPQ+Y+N SGE+ GPLAAYY++PL
Sbjct: 88 MVDRIARDEGITMNTIQSKSLLGIGSIGEVPVLLVKPQSYINYSGEAIGPLAAYYQVPLR 147
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV +D+M LP GVLRL+ GGHG HNGL++VM +RE RL IGIG PPG+MD +
Sbjct: 148 HILVMYDEMSLPNGVLRLQRKGGHGRHNGLQNVMECLDSSRELPRLSIGIGSPPGKMDTR 207
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYK 168
AFLLQKF++ R +IDTAL++GV+ ++ L+ KG + S FN +QKYK
Sbjct: 208 AFLLQKFSSEERLQIDTALEQGVDAVRTLVLKGFSGSIERFNLVQKYK 255
>gi|357127248|ref|XP_003565295.1| PREDICTED: chloroplastic group IIB intron splicing facilitator
CRS2, chloroplastic-like [Brachypodium distachyon]
Length = 369
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 93/172 (54%), Positives = 126/172 (73%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
M+D A+ +GI MNT+ K+ G G +G+ PVLL KPQ+YMN GE+ GPLAAYY++PL
Sbjct: 198 MVDRIAQVEGIVMNTIQSKSLLGVGSIGEVPVLLVKPQSYMNYCGEAIGPLAAYYQVPLR 257
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV +D+M LP GVLRL+ GGHG HNGL++V+ + G REF RL IGIG PPG+MD +
Sbjct: 258 HILVIYDEMSLPNGVLRLQRKGGHGRHNGLQNVIEHLDGCREFPRLSIGIGSPPGKMDTR 317
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHIRL 172
AFLLQKF++ R +ID AL++GV+ ++ L+ KG + S FN +QKYK R+
Sbjct: 318 AFLLQKFSSEERVQIDIALEQGVDAVRTLVLKGFSGSIERFNLVQKYKFNRV 369
>gi|357508117|ref|XP_003624347.1| Chloroplastic group IIB intron splicing facilitator CRS2-B
[Medicago truncatula]
gi|355499362|gb|AES80565.1| Chloroplastic group IIB intron splicing facilitator CRS2-B
[Medicago truncatula]
Length = 251
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 92/172 (53%), Positives = 128/172 (74%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID+ ++S+GI MNT+ KA G G +G+ PVLLAKPQTYMN SGES GPLAAYY++PL
Sbjct: 80 IIDSLSQSEGILMNTIQSKALIGIGSIGEVPVLLAKPQTYMNFSGESVGPLAAYYRVPLR 139
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV +D+ LP GVL+L+ GGHG HNGLK+V+ + G+R+F RL IGIG PPG MD +
Sbjct: 140 HILVVYDETSLPNGVLKLQPKGGHGHHNGLKNVIGHLDGSRDFPRLAIGIGNPPGTMDLR 199
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHIRL 172
AFLLQKF+++ R+++D +L++GV+ +K L+ G FN QKYK+ ++
Sbjct: 200 AFLLQKFSSVERKQVDESLEQGVQAVKTLVLNGFNHHVNRFNLGQKYKYNKV 251
>gi|357521083|ref|XP_003630830.1| Peptidyl-tRNA hydrolase [Medicago truncatula]
gi|355524852|gb|AET05306.1| Peptidyl-tRNA hydrolase [Medicago truncatula]
Length = 258
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 91/169 (53%), Positives = 126/169 (74%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
M+DA AE++GISM++V KA FG+G++GD PV+LAKPQT+MNLSGES G + +YYK+PL
Sbjct: 88 MVDAIAEAEGISMSSVSFKALFGKGYIGDVPVILAKPQTFMNLSGESVGAIVSYYKIPLK 147
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+VLV DD+ LP LRL GGHGGHNG+KSV+N+ +GN F RLRIGIGRPPG+MDP
Sbjct: 148 QVLVIFDDLDLPFAKLRLLPKGGHGGHNGMKSVINHLKGNSGFPRLRIGIGRPPGKMDPV 207
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKH 169
AF+L+ F +E ++ LQ+G+E ++++L G + A N+ +K +
Sbjct: 208 AFVLRPFTKQEKEELNFTLQDGLEAVRIILLDGFDKGATFVNSAKKMEQ 256
>gi|218187457|gb|EEC69884.1| hypothetical protein OsI_00266 [Oryza sativa Indica Group]
Length = 259
Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 91/168 (54%), Positives = 124/168 (73%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
M+D A +GI+MNT+ K+ G G +G+ PVLL KPQ+Y+N SGE+ GPLAAYY++PL
Sbjct: 88 MVDRIARDEGITMNTIQSKSLLGIGSIGEVPVLLVKPQSYINYSGEAIGPLAAYYQVPLR 147
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV +D+M LP GVLRL+ GGHG HNGL++VM +RE RL IGIG PPG+MD +
Sbjct: 148 HILVMYDEMSLPNGVLRLQRKGGHGRHNGLQNVMECLDSSRELPRLSIGIGSPPGKMDTR 207
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYK 168
AFLLQKF++ + +IDTAL++GV+ ++ L+ KG + S FN +QKYK
Sbjct: 208 AFLLQKFSSEEQLQIDTALEQGVDAVRTLVLKGFSGSIERFNLVQKYK 255
>gi|270047872|pdb|1RYB|A Chain A, Crystal Structure Of The Chloroplast Group Ii Intron
Splicing Factor Crs2
Length = 205
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 90/165 (54%), Positives = 123/165 (74%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
M+D A +GI+MNT+ K+ G G +G+ PVL+ KPQ+YMN SGE+ GPLAAYY++PL
Sbjct: 41 MVDRIAAEEGITMNTIQSKSLLGIGSIGEVPVLVVKPQSYMNYSGEAIGPLAAYYQVPLR 100
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+L+ +DD LP GVLRL+ GGHG HNGL++V+ + G REF RL IGIG PPG+MDP+
Sbjct: 101 HILLIYDDTSLPNGVLRLQKKGGHGRHNGLQNVIEHLDGRREFPRLSIGIGSPPGKMDPR 160
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQ 165
AFLLQKF++ R +IDTAL++GV+ ++ L+ KG + S FN +Q
Sbjct: 161 AFLLQKFSSEERVQIDTALEQGVDAVRTLVLKGFSGSTERFNLVQ 205
>gi|388501072|gb|AFK38602.1| unknown [Lotus japonicus]
Length = 247
Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 90/172 (52%), Positives = 128/172 (74%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID+ + ++GI MNT+ KA G G +GD PVLLAKPQTYMN SGE+ GPLAAYY++PL
Sbjct: 76 IIDSLSRAEGILMNTIQSKALIGLGSIGDVPVLLAKPQTYMNFSGEAVGPLAAYYRIPLR 135
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+++ +D+ LP GVLRL+ GGHG HNG K+VM + G+R+F RL IGIG PPG MD +
Sbjct: 136 HIILVYDETSLPNGVLRLQPKGGHGHHNGSKNVMGHLDGSRDFPRLAIGIGNPPGSMDSR 195
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHIRL 172
AFLLQKF+++ R++ID +L++GV+ ++ L+ G ++ FN QKYK+ ++
Sbjct: 196 AFLLQKFSSVERQQIDDSLEQGVQAIRTLVLHGFSQHVSRFNLGQKYKYHKV 247
>gi|40889732|pdb|1RYN|A Chain A, Structure Of The Chloroplast Group Ii Intron Splicing
Factor Crs2
Length = 202
Score = 198 bits (504), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 91/166 (54%), Positives = 123/166 (74%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
M+D A +GI+MNT K+ G G +G+ PVL+ KPQ+YMN SGE+ GPLAAYY++PL
Sbjct: 29 MVDRIAAEEGITMNTNQFKSLLGTGSIGEVPVLVVKPQSYMNYSGEAIGPLAAYYQVPLR 88
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+L+ +DD LP GVLRL+ GGHG HNGL++V+ + G REF RL IGIG PPG+MDP+
Sbjct: 89 HILLIYDDTSLPNGVLRLQKKGGHGRHNGLQNVIEHLDGRREFPRLSIGIGSPPGKMDPR 148
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 166
AFLLQKF++ R +IDTAL++GV+ ++ L+ KG + S FN +QK
Sbjct: 149 AFLLQKFSSEERVQIDTALEQGVDAVRTLVLKGFSGSTERFNLVQK 194
>gi|297805938|ref|XP_002870853.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297316689|gb|EFH47112.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 241
Score = 198 bits (504), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 96/168 (57%), Positives = 120/168 (71%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MID A + ISMNT+ KA G G VG+ P+LL KPQ YMN SGES GPLAAYY++PL
Sbjct: 70 MIDHIARATEISMNTIQSKALVGIGSVGEVPILLVKPQAYMNFSGESVGPLAAYYQIPLR 129
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+L+ +DDMGLP GVLRL+ GGH HNGLK+V + G R + RL IGIG PPG MD K
Sbjct: 130 HILMIYDDMGLPNGVLRLQPKGGHSQHNGLKNVTEHLNGCRGYPRLSIGIGNPPGNMDMK 189
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYK 168
AFLLQKF+ + R++ID L++GVE +K L+ +G ++S FN QKYK
Sbjct: 190 AFLLQKFSPLERKQIDAGLEQGVEGVKTLVEEGFSDSISRFNLGQKYK 237
>gi|297844788|ref|XP_002890275.1| peptidyl-tRNA hydrolase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336117|gb|EFH66534.1| peptidyl-tRNA hydrolase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 129/170 (75%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
M+DA A ++GISMNTV+ KA FG+G +G+ P+++AKPQT+MNLSGES G + ++YK+PL
Sbjct: 111 MVDALANAEGISMNTVNFKALFGKGVIGNIPIMMAKPQTFMNLSGESVGQIVSFYKIPLK 170
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+VLV +DD+ LP G LRL GGHGGHNG++S+++ +G+R+F RLRIGIGRPPG+MD
Sbjct: 171 QVLVVYDDLDLPFGKLRLLPKGGHGGHNGMRSIIDRLKGSRDFPRLRIGIGRPPGKMDTA 230
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHI 170
F+L++FN +E +D Q G+E +++LL +G+ +SA NT + + +
Sbjct: 231 NFVLRQFNRQEQEELDYTFQTGIEAIRILLLEGINKSATFVNTRKSMEQL 280
>gi|225455878|ref|XP_002275254.1| PREDICTED: peptidyl-tRNA hydrolase, chloroplastic-like [Vitis
vinifera]
Length = 205
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 89/169 (52%), Positives = 126/169 (74%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
M+DA AE++GIS+++V K+ FG+GF+G+ PV+LAKPQT+MN+SGES G + +YYK+PL
Sbjct: 34 MVDAIAEAEGISISSVSFKSLFGKGFIGNVPVMLAKPQTFMNVSGESVGAIVSYYKIPLK 93
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+VLV DD+ LP LRL GGHGGHNG++SV+++F+G+R+F RLRIGIGRPPG+MD
Sbjct: 94 QVLVIFDDLDLPFSKLRLLPKGGHGGHNGMRSVIDHFKGSRDFPRLRIGIGRPPGKMDTA 153
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKH 169
F+L F+ RE +D Q GVE +++LL +G +SA NT + +
Sbjct: 154 NFVLSPFSKREREELDFTFQNGVEAVRILLLEGFNKSASFVNTAKSLEQ 202
>gi|30685853|ref|NP_173279.2| Peptidyl-tRNA hydrolase [Arabidopsis thaliana]
gi|134035412|sp|Q8GW64.2|PTHC_ARATH RecName: Full=Peptidyl-tRNA hydrolase, chloroplastic; AltName:
Full=C-PTH; Flags: Precursor
gi|332191593|gb|AEE29714.1| Peptidyl-tRNA hydrolase [Arabidopsis thaliana]
Length = 288
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 129/170 (75%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
M+DA A+++GISMNTV+ KA FG+G +G+ P++LAKPQT+MNLSGES G + ++YK+PL
Sbjct: 118 MVDALADAEGISMNTVNFKALFGKGVIGNIPIMLAKPQTFMNLSGESVGQIVSFYKIPLK 177
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+VLV +DD+ LP G LRL GGHGGHNG++S+++ +G+R+F RLRIGIGRPPG+MD
Sbjct: 178 QVLVVYDDLDLPFGKLRLLPKGGHGGHNGMRSIIDRLKGSRDFPRLRIGIGRPPGKMDTA 237
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHI 170
F+L++FN +E +D Q G+E +++LL +G +SA NT + + +
Sbjct: 238 NFVLRQFNRQEQEELDHTFQTGLEAIRILLLEGFNKSATFVNTRKSMEQL 287
>gi|297734182|emb|CBI15429.3| unnamed protein product [Vitis vinifera]
Length = 307
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 89/169 (52%), Positives = 126/169 (74%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
M+DA AE++GIS+++V K+ FG+GF+G+ PV+LAKPQT+MN+SGES G + +YYK+PL
Sbjct: 136 MVDAIAEAEGISISSVSFKSLFGKGFIGNVPVMLAKPQTFMNVSGESVGAIVSYYKIPLK 195
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+VLV DD+ LP LRL GGHGGHNG++SV+++F+G+R+F RLRIGIGRPPG+MD
Sbjct: 196 QVLVIFDDLDLPFSKLRLLPKGGHGGHNGMRSVIDHFKGSRDFPRLRIGIGRPPGKMDTA 255
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKH 169
F+L F+ RE +D Q GVE +++LL +G +SA NT + +
Sbjct: 256 NFVLSPFSKREREELDFTFQNGVEAVRILLLEGFNKSASFVNTAKSLEQ 304
>gi|224118918|ref|XP_002317938.1| predicted protein [Populus trichocarpa]
gi|222858611|gb|EEE96158.1| predicted protein [Populus trichocarpa]
Length = 271
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 126/170 (74%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
M+DA A+++GIS++ V KA FG+GF+G+ PV+ AKPQT+MN SGES G + +YYK+PL
Sbjct: 101 MVDALADAEGISISGVSFKALFGKGFIGNVPVMFAKPQTFMNASGESVGAIVSYYKIPLK 160
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+VL+ +DD+ LP LRL GGHGGHNG+KSV+N+F+GNR+F RLRIGIGRPPG+MD
Sbjct: 161 QVLLIYDDLDLPFAKLRLLPKGGHGGHNGMKSVINHFKGNRDFPRLRIGIGRPPGKMDTA 220
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHI 170
F+L+ F E +D Q+G+E +++LL +GL +SA N+ + + +
Sbjct: 221 NFVLRPFTKQEHEELDFMFQQGIEAVRILLLEGLNKSATFVNSTKSMEQL 270
>gi|26453108|dbj|BAC43630.1| unknown protein [Arabidopsis thaliana]
gi|28950849|gb|AAO63348.1| At1g18440 [Arabidopsis thaliana]
Length = 288
Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 129/170 (75%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
M+DA A+++GISMNTV+ KA FG+G +G+ P++LAKPQT+M+LSGES G + ++YK+PL
Sbjct: 118 MVDALADAEGISMNTVNFKALFGKGVIGNIPIMLAKPQTFMDLSGESVGQIVSFYKIPLK 177
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+VLV +DD+ LP G LRL GGHGGHNG++S+++ +G+R+F RLRIGIGRPPG+MD
Sbjct: 178 QVLVVYDDLDLPFGKLRLLPKGGHGGHNGMRSIIDRLKGSRDFPRLRIGIGRPPGKMDTA 237
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHI 170
F+L++FN +E +D Q G+E +++LL +G +SA NT + + +
Sbjct: 238 NFVLRQFNRQEQEELDHTFQTGLEAIRILLLEGFNKSATFVNTRKSMEQL 287
>gi|58743494|gb|AAW81735.1| Putative Putative Pepidyl-tRNA hydrolase family protein [Brassica
oleracea]
Length = 291
Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 86/170 (50%), Positives = 128/170 (75%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
M+DA AE++GISMNTV+ KA FG+G +G+ P++LAKPQT+MN SGES G + ++YK+PL
Sbjct: 121 MVDALAEAEGISMNTVNFKALFGKGVIGNIPIMLAKPQTFMNASGESVGQIVSFYKIPLK 180
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+VLV +DD+ LP G LRL GGHGGHNG++S+++ +G+R+F RLRIGIGRPPG+MD
Sbjct: 181 QVLVIYDDLDLPFGKLRLLPKGGHGGHNGMRSIIDRLKGSRDFPRLRIGIGRPPGKMDTA 240
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHI 170
++L++FN +E +D Q G+E ++++L +G +SA NT + + +
Sbjct: 241 NYVLRQFNKQEQEELDYTFQTGLEAIRIMLLEGFNKSATFVNTQKSMQQL 290
>gi|388522905|gb|AFK49514.1| unknown [Medicago truncatula]
Length = 258
Score = 195 bits (496), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 89/169 (52%), Positives = 124/169 (73%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
M+D AE++GISM++V KA FG+G++GD PV+LAKPQT+MNLSGES G + +YYK+PL
Sbjct: 88 MVDTIAEAEGISMSSVSFKALFGKGYIGDVPVILAKPQTFMNLSGESVGAIVSYYKIPLK 147
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+VLV D + LP LRL GGHGGHNG+KSV+N+ +GN F RLRIGIGRPPG+MDP
Sbjct: 148 QVLVIFDGLDLPFAKLRLLPKGGHGGHNGMKSVINHLKGNSGFPRLRIGIGRPPGKMDPV 207
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKH 169
AF+L+ F +E ++ LQ+G+E ++++L G + A N+ +K +
Sbjct: 208 AFVLRPFTKQEKEELNFTLQDGLEAVRIILLDGFDKGATFVNSAKKMEQ 256
>gi|42573527|ref|NP_974860.1| chloroplastic group IIB intron splicing facilitator CRS2-A
[Arabidopsis thaliana]
gi|332006907|gb|AED94290.1| chloroplastic group IIB intron splicing facilitator CRS2-A
[Arabidopsis thaliana]
Length = 250
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 119/168 (70%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MID A + ISMNT+ KA G G VG+ P+LL KPQ YMN SGES GPLAAYY++PL
Sbjct: 79 MIDHIARATDISMNTIQSKALVGIGSVGEVPILLVKPQGYMNFSGESVGPLAAYYQIPLR 138
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+L+ +DDMGL GVLRL+ GGH HNGLK+V + G R + RL IGIG PPG MD K
Sbjct: 139 HILMIYDDMGLSNGVLRLQPKGGHSQHNGLKNVTEHLNGCRGYPRLSIGIGNPPGNMDMK 198
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYK 168
AFLLQKF+ + R+++D L++GVE +K L+ +G ++S FN QKYK
Sbjct: 199 AFLLQKFSPLERKQMDEGLEQGVEGVKTLVEEGFSDSISRFNLGQKYK 246
>gi|449486844|ref|XP_004157420.1| PREDICTED: peptidyl-tRNA hydrolase, chloroplastic-like [Cucumis
sativus]
Length = 273
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 125/170 (73%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
M+DA AE++GIS++ V KA G+GF+GD PV+LAKPQT+MN SGES G + +YYK+PL
Sbjct: 103 MVDAVAEAEGISISNVSFKALIGKGFIGDVPVMLAKPQTFMNASGESVGAIVSYYKIPLK 162
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+VLV DD+ LP LR+ GGHGGHNG++S++++F+G+R+F RLRIGIGRPPG+MD
Sbjct: 163 QVLVIFDDLDLPFAKLRMLPKGGHGGHNGMRSIIDHFKGSRDFPRLRIGIGRPPGKMDAA 222
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHI 170
F+L+ FN RE ++ LQ G + +++LL +G +SA NT + + I
Sbjct: 223 NFVLRPFNKQEREELNFTLQVGEDAIRILLLEGFNKSATFVNTNKSLEQI 272
>gi|218188893|gb|EEC71320.1| hypothetical protein OsI_03361 [Oryza sativa Indica Group]
Length = 250
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 126/170 (74%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MID AE++GIS++++ KA G+G +GDAP++LAKPQT+MN SGES G L +Y+K+PLN
Sbjct: 79 MIDVIAEAEGISLSSMQFKAMVGKGRIGDAPIMLAKPQTFMNASGESVGQLVSYFKIPLN 138
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+VLV +DD+ LP LRL GGHGGHNG++S++N+ + NR+F RLRIGIGRPPG+MDP
Sbjct: 139 QVLVMYDDLDLPFAKLRLLPKGGHGGHNGMRSIINHLKQNRDFPRLRIGIGRPPGKMDPA 198
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHI 170
F+L+ FN +E +D A G+E ++++ +G +SA + NT Q + +
Sbjct: 199 NFVLRPFNRKEQEELDFAFHRGLEAVRIMALEGFNKSATYVNTAQSSEML 248
>gi|15240875|ref|NP_198645.1| chloroplastic group IIB intron splicing facilitator CRS2-A
[Arabidopsis thaliana]
gi|75309164|sp|Q9FKN4.1|CRS2A_ARATH RecName: Full=Chloroplastic group IIB intron splicing facilitator
CRS2-A, chloroplastic; AltName: Full=CRS2-like protein
A; AltName: Full=Chloroplastic RNA splicing factor 2-A;
Flags: Precursor
gi|9758861|dbj|BAB09443.1| unnamed protein product [Arabidopsis thaliana]
gi|90962962|gb|ABE02405.1| At5g38290 [Arabidopsis thaliana]
gi|332006908|gb|AED94291.1| chloroplastic group IIB intron splicing facilitator CRS2-A
[Arabidopsis thaliana]
Length = 246
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 119/168 (70%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MID A + ISMNT+ KA G G VG+ P+LL KPQ YMN SGES GPLAAYY++PL
Sbjct: 75 MIDHIARATDISMNTIQSKALVGIGSVGEVPILLVKPQGYMNFSGESVGPLAAYYQIPLR 134
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+L+ +DDMGL GVLRL+ GGH HNGLK+V + G R + RL IGIG PPG MD K
Sbjct: 135 HILMIYDDMGLSNGVLRLQPKGGHSQHNGLKNVTEHLNGCRGYPRLSIGIGNPPGNMDMK 194
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYK 168
AFLLQKF+ + R+++D L++GVE +K L+ +G ++S FN QKYK
Sbjct: 195 AFLLQKFSPLERKQMDEGLEQGVEGVKTLVEEGFSDSISRFNLGQKYK 242
>gi|297811751|ref|XP_002873759.1| peptidyl-tRNA hydrolase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297319596|gb|EFH50018.1| peptidyl-tRNA hydrolase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 239
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 91/168 (54%), Positives = 118/168 (70%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MID A +G+ MNT+ KA G G + D P+LL KPQTYMN SGES G LA++Y++PL
Sbjct: 68 MIDVLARKEGVLMNTIQSKALIGIGAIEDVPILLVKPQTYMNFSGESVGSLASHYRVPLR 127
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+L+ +D+M LP GVLRL+ GG G HNG+KSVM + G R F RL IGIG+PPG MD K
Sbjct: 128 HILMLYDEMALPNGVLRLQPKGGQGYHNGVKSVMGHLDGRRNFPRLSIGIGKPPGNMDMK 187
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYK 168
AFLLQKF+ + R++ID AL++G E +K L+ G + FN +QKYK
Sbjct: 188 AFLLQKFSPLERKQIDEALEQGSEAVKTLVLNGFNQGISRFNLVQKYK 235
>gi|255551384|ref|XP_002516738.1| peptidyl-tRNA hydrolase, putative [Ricinus communis]
gi|223544111|gb|EEF45636.1| peptidyl-tRNA hydrolase, putative [Ricinus communis]
Length = 253
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 89/169 (52%), Positives = 122/169 (72%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MID A+++ ++MNT+ KA G G + + P+LL KPQ YMN SGES GPLAA+Y++PL
Sbjct: 82 MIDKIAKAEAVAMNTIQSKALIGIGCIKEVPILLVKPQAYMNFSGESVGPLAAHYQVPLR 141
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+L+ +D+M LP GV+RL+ GGHG HNG+KSVM + G REF RL IGIG PPG MD +
Sbjct: 142 HILLIYDEMSLPNGVMRLQPKGGHGHHNGVKSVMEHLDGCREFPRLCIGIGNPPGTMDMR 201
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKH 169
AFLLQKF++ RE+ID AL +G++ ++ L+ G ++ FN QKYK+
Sbjct: 202 AFLLQKFSSTEREQIDAALGQGIDAVRTLVLSGFNQNITRFNLGQKYKY 250
>gi|115439337|ref|NP_001043948.1| Os01g0693900 [Oryza sativa Japonica Group]
gi|75285812|sp|Q5N9Q7.1|PTHM_ORYSJ RecName: Full=Peptidyl-tRNA hydrolase, mitochondrial; AltName:
Full=M-PTH; Flags: Precursor
gi|56785144|dbj|BAD81799.1| Peptidyl-tRNA hydrolase-like [Oryza sativa Japonica Group]
gi|113533479|dbj|BAF05862.1| Os01g0693900 [Oryza sativa Japonica Group]
gi|215704712|dbj|BAG94340.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222619093|gb|EEE55225.1| hypothetical protein OsJ_03102 [Oryza sativa Japonica Group]
Length = 250
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 126/170 (74%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MID AE++GIS++++ KA G+G +GDAP++LAKPQT+MN SGES G L +Y+K+PLN
Sbjct: 79 MIDVIAEAEGISLSSMQFKAMVGKGRIGDAPIMLAKPQTFMNASGESVGQLVSYFKIPLN 138
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+VLV +DD+ LP LRL GGHGGHNG++S++N+ + NR+F RLRIGIGRPPG+MDP
Sbjct: 139 QVLVMYDDLDLPFAKLRLLPKGGHGGHNGVRSIINHLKQNRDFPRLRIGIGRPPGKMDPA 198
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHI 170
F+L+ FN +E +D A G+E ++++ +G +SA + NT Q + +
Sbjct: 199 NFVLRPFNRKEQEELDFAFHRGLEAVRIMALEGFNKSATYVNTAQSSEML 248
>gi|449439389|ref|XP_004137468.1| PREDICTED: peptidyl-tRNA hydrolase, chloroplastic-like [Cucumis
sativus]
Length = 274
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 125/170 (73%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
M+DA AE++GIS++ V KA G+GF+GD PV+LAKPQT+MN SGES G + +YYK+PL
Sbjct: 104 MVDAVAEAEGISISNVSFKALIGKGFIGDVPVMLAKPQTFMNASGESVGAIVSYYKIPLK 163
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+VLV DD+ LP LR+ GGHGGHNG++S++++F+G+R+F RLRIGIGRPPG+MD
Sbjct: 164 QVLVIFDDLDLPFAKLRMLPKGGHGGHNGMRSIIDHFKGSRDFPRLRIGIGRPPGKMDAA 223
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHI 170
F+L+ FN RE ++ LQ G + +++LL +G +SA NT + + I
Sbjct: 224 NFVLRPFNKQEREELNFTLQVGEDAIRILLLEGFNKSATFVNTNKSLEQI 273
>gi|26451849|dbj|BAC43017.1| putative CRS2 [Arabidopsis thaliana]
Length = 246
Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 119/168 (70%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MID A + ISMNT+ KA G G VG+ P+LL KPQ YMN SGES GPLAAYY++PL
Sbjct: 75 MIDHIARATDISMNTIQSKALVGIGSVGEVPILLVKPQGYMNFSGESVGPLAAYYQIPLR 134
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+L+ +DD+GL GVLRL+ GGH HNGLK+V + G R + RL IGIG PPG MD K
Sbjct: 135 HILMIYDDLGLSNGVLRLQPKGGHSQHNGLKNVTEHLNGCRGYPRLSIGIGNPPGNMDMK 194
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYK 168
AFLLQKF+ + R+++D L++GVE +K L+ +G ++S FN QKYK
Sbjct: 195 AFLLQKFSPLERKQMDEGLEQGVEGVKTLVEEGFSDSISRFNLGQKYK 242
>gi|242058417|ref|XP_002458354.1| hypothetical protein SORBIDRAFT_03g031890 [Sorghum bicolor]
gi|241930329|gb|EES03474.1| hypothetical protein SORBIDRAFT_03g031890 [Sorghum bicolor]
Length = 247
Score = 191 bits (486), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 86/165 (52%), Positives = 125/165 (75%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MID AE++GIS++++ KA G+G +GDAP++LAKPQT+MN SGES G L +Y+K+PLN
Sbjct: 76 MIDVIAEAEGISLSSMQFKAMVGKGRIGDAPIMLAKPQTFMNASGESVGQLVSYFKIPLN 135
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+V+V +DD+ LP LRL GGHGGHNG++S++N+ + +R+F RLRIGIGRPPG+MDP
Sbjct: 136 QVVVMYDDLDLPFAKLRLLPKGGHGGHNGMRSIVNHLKQSRDFPRLRIGIGRPPGKMDPA 195
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQ 165
F+L+ FN +E +D AL G+E +++++ G +SA + NT Q
Sbjct: 196 NFVLRPFNKKEQEELDFALHRGLEAVRIMVLGGFNKSATYVNTAQ 240
>gi|15237280|ref|NP_197118.1| chloroplastic group IIB intron splicing facilitator CRS2-B
[Arabidopsis thaliana]
gi|145334495|ref|NP_001078593.1| chloroplastic group IIB intron splicing facilitator CRS2-B
[Arabidopsis thaliana]
gi|75311128|sp|Q9LF14.1|CRS2B_ARATH RecName: Full=Chloroplastic group IIB intron splicing facilitator
CRS2-B, chloroplastic; AltName: Full=CRS2-like protein
B; AltName: Full=Chloroplastic RNA splicing factor 2-B;
Flags: Precursor
gi|9755824|emb|CAC01855.1| CRS2-like protein [Arabidopsis thaliana]
gi|38016015|gb|AAR07514.1| At5g16140 [Arabidopsis thaliana]
gi|51968726|dbj|BAD43055.1| CRS2-like protein [Arabidopsis thaliana]
gi|332004868|gb|AED92251.1| chloroplastic group IIB intron splicing facilitator CRS2-B
[Arabidopsis thaliana]
gi|332004869|gb|AED92252.1| chloroplastic group IIB intron splicing facilitator CRS2-B
[Arabidopsis thaliana]
Length = 240
Score = 191 bits (485), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 90/168 (53%), Positives = 119/168 (70%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MID A +G+ MNT+ KA G G + D P+LLAKPQTYMN SGES G LA++Y++PL
Sbjct: 69 MIDVLARKEGVLMNTIQSKALIGIGAIEDVPILLAKPQTYMNFSGESVGSLASHYRVPLR 128
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+L+ +D+M LP GVLRL+ GG G HNG+KSVM + G R F RL IGIG+PPG MD K
Sbjct: 129 HILMIYDEMALPNGVLRLQPKGGQGYHNGVKSVMGHLDGRRNFPRLSIGIGKPPGNMDMK 188
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYK 168
AFLLQKF+ + +++I+ AL++G E +K L+ G + FN +QKYK
Sbjct: 189 AFLLQKFSPLEQKQIEEALEQGSEAVKTLVLNGFNQGISRFNLVQKYK 236
>gi|225452074|ref|XP_002284030.1| PREDICTED: chloroplastic group IIB intron splicing facilitator
CRS2, chloroplastic [Vitis vinifera]
gi|296087264|emb|CBI33638.3| unnamed protein product [Vitis vinifera]
Length = 246
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/169 (55%), Positives = 119/169 (70%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MID ++ +GI +NT+ KA G G +G+ P+LLAKPQ YMN SGES GPLAAYY++PL
Sbjct: 75 MIDRISQEEGILLNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAYYQVPLR 134
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV +D+M LP GVLRL GGHG HNGLK+VM + G REF RL IGIG PPG MD K
Sbjct: 135 HILVVYDEMNLPNGVLRLAPRGGHGYHNGLKNVMGHLDGCREFPRLCIGIGNPPGTMDMK 194
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKH 169
A+LLQKF+ R++ID A ++G+ ++ L+ G S FN QKYK+
Sbjct: 195 AYLLQKFSFEERKQIDAAQEQGIGAVRNLVLNGFNHSTTRFNLGQKYKY 243
>gi|255541798|ref|XP_002511963.1| peptidyl-tRNA hydrolase, putative [Ricinus communis]
gi|223549143|gb|EEF50632.1| peptidyl-tRNA hydrolase, putative [Ricinus communis]
Length = 272
Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 125/169 (73%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
M+DA A+S+GI +++V KA G+G++G+ PV+LAKPQT+MN SGES G + +YYK+PL
Sbjct: 102 MVDAVADSEGIPLSSVSFKALLGKGYIGNVPVMLAKPQTFMNASGESVGAIVSYYKIPLK 161
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+VL+ +DD+ LP LRL GGHGGHNG++SV+++F+G+R+F RLRIGIGRPPG+MD
Sbjct: 162 QVLLIYDDLDLPFAKLRLLPKGGHGGHNGMRSVIDHFKGSRDFPRLRIGIGRPPGKMDSA 221
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKH 169
F+L+ F+ E +D Q+G+E +++LL +G +SA N+ + +
Sbjct: 222 NFVLRPFSRQEHEELDFTFQQGLEAIRILLLEGFNKSATFVNSAKSMEQ 270
>gi|226531744|ref|NP_001148279.1| peptidyl-tRNA hydrolase [Zea mays]
gi|194697668|gb|ACF82918.1| unknown [Zea mays]
gi|195617118|gb|ACG30389.1| peptidyl-tRNA hydrolase [Zea mays]
gi|414880876|tpg|DAA58007.1| TPA: peptidyl-tRNA hydrolase [Zea mays]
Length = 247
Score = 188 bits (477), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 125/165 (75%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MID AE++GIS++++ KA G+G +GDA ++LAKPQT+MN SGES G L +Y+K+PL+
Sbjct: 76 MIDVIAEAEGISLSSMQFKAMVGKGRIGDASIMLAKPQTFMNASGESVGQLVSYFKIPLS 135
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+V+V +DD+ LP LRL GGHGGHNG++S++N+ + +R+F RLRIGIGRPPG+MDP
Sbjct: 136 QVVVMYDDLDLPFAKLRLLPKGGHGGHNGMRSIVNHLKQSRDFPRLRIGIGRPPGKMDPA 195
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQ 165
F+L+ FN ++ +D AL G+E +++++ +G +SA + NT Q
Sbjct: 196 NFVLRPFNKKEQQELDFALHRGLEAVRIMVPEGFNKSATYVNTAQ 240
>gi|357136028|ref|XP_003569608.1| PREDICTED: peptidyl-tRNA hydrolase, mitochondrial-like
[Brachypodium distachyon]
Length = 249
Score = 184 bits (468), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 82/165 (49%), Positives = 119/165 (72%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MID AE++GIS++++ KA G+G +GD P++LAKPQT+MN SGES G L +Y+K+PLN
Sbjct: 78 MIDVIAEAEGISLSSMQFKAMVGRGRIGDVPIMLAKPQTFMNASGESVGQLVSYFKIPLN 137
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+VLV +DD+ LP LRL GGHGGHNG++S++N+ + +F RLRIGIGRPPG+MDP
Sbjct: 138 QVLVMYDDLDLPFAKLRLLPKGGHGGHNGMRSIINHLKQTHDFPRLRIGIGRPPGKMDPA 197
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQ 165
F+L+ F +E +D G+E ++++ +G +SA NT+Q
Sbjct: 198 NFVLRPFTKKEQEELDFTFHRGLEAVRIMTVEGFNKSATFVNTVQ 242
>gi|358248120|ref|NP_001239818.1| uncharacterized protein LOC100804132 [Glycine max]
gi|255645504|gb|ACU23247.1| unknown [Glycine max]
Length = 244
Score = 184 bits (468), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 120/172 (69%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID+ + ++GI MNT+ KA G G +G+ P+LLAKPQTYMN SGES GPLAAYY++PL
Sbjct: 73 IIDSLSRAEGIQMNTIQSKALIGIGSIGEVPILLAKPQTYMNFSGESVGPLAAYYQVPLR 132
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+L+ D+ LP GVLRL+ GGHG HNGLK+VM + G F RL +GIG PPG MD +
Sbjct: 133 HILLVFDETSLPNGVLRLQPKGGHGHHNGLKNVMGHLDGCSAFPRLAVGIGNPPGTMDLR 192
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHIRL 172
A+LLQKF+ R++ID +L++ V ++ ++ G + FN QKYK+ ++
Sbjct: 193 AYLLQKFSVEERKQIDASLEQAVAAVRTVVLNGFDQHVNRFNLGQKYKYHKV 244
>gi|168038662|ref|XP_001771819.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676950|gb|EDQ63427.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 252
Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 85/166 (51%), Positives = 117/166 (70%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MIDA AE++ I + + K+ G+G++G PVLLAKPQTYMNLSGES GPL+AYYK+P
Sbjct: 82 MIDAIAEAENIPLRMIQHKSLLGKGYIGTTPVLLAKPQTYMNLSGESVGPLSAYYKIPRE 141
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
RVL DD+ L L+L GGHGGHNG++S++++F G ++F RLR GIGRP G M P
Sbjct: 142 RVLAIFDDLDLQFATLKLLPKGGHGGHNGMRSLIDHFGGKQDFPRLRFGIGRPAGSMPPS 201
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 166
A++LQKF++ E +D LQ GVE ++LL ++GL ++ +N K
Sbjct: 202 AYVLQKFSSKEIEELDVVLQRGVEGVRLLTTQGLEKAVSTWNKKSK 247
>gi|168050723|ref|XP_001777807.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670783|gb|EDQ57345.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 255
Score = 182 bits (461), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 82/168 (48%), Positives = 120/168 (71%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+IDA AE++ I + T+ ++ G+GF+G PVLLAKP TYMNLSGES GP++ YYK+P
Sbjct: 80 LIDAIAEAENIPLRTIQQRSLLGKGFIGPTPVLLAKPHTYMNLSGESVGPISTYYKIPRE 139
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
RVL +DD+ L +LR+ GGHGGHNG++S++ +F G ++F RLR G+GRP MDP
Sbjct: 140 RVLAIYDDLELEFAMLRILPRGGHGGHNGMRSLIEHFGGKQDFPRLRFGVGRPECNMDPS 199
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYK 168
A++LQKFN R+ +D LQ GVE ++LL+++GL ++ +N +K +
Sbjct: 200 AYVLQKFNPRERKELDEVLQRGVEGVRLLMTEGLQKTVTTWNLHRKSR 247
>gi|242088699|ref|XP_002440182.1| hypothetical protein SORBIDRAFT_09g027420 [Sorghum bicolor]
gi|241945467|gb|EES18612.1| hypothetical protein SORBIDRAFT_09g027420 [Sorghum bicolor]
Length = 262
Score = 179 bits (453), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 78/163 (47%), Positives = 119/163 (73%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MIDA AE++GIS+++ KA G+G +GD PV+LAKPQT+MN SGES G L +Y+K+PLN
Sbjct: 91 MIDAIAEAEGISVSSKQFKAIVGKGLIGDVPVMLAKPQTFMNASGESVGQLVSYFKIPLN 150
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+++V +DD+ LP LRL GGHGGHNG++S++++ + +R FARLRIGIGRPP +
Sbjct: 151 QLVVIYDDLDLPFAKLRLLPKGGHGGHNGMRSIIDHLKQSRNFARLRIGIGRPPEEQGAI 210
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
+F+LQ F +E ++ Q G++ +++++ +G +SA+ NT
Sbjct: 211 SFVLQSFTVQEKEELEVVFQRGLQAVRIMVQEGFNKSAQFVNT 253
>gi|356524077|ref|XP_003530659.1| PREDICTED: peptidyl-tRNA hydrolase, chloroplastic-like [Glycine
max]
Length = 184
Score = 179 bits (453), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 81/128 (63%), Positives = 101/128 (78%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
M+D AE++GISM TV KA FG+GF+GD PV+LAKPQT+MNLSGES G + +YYK+P+
Sbjct: 51 MVDTIAEAEGISMTTVSFKALFGKGFIGDVPVILAKPQTFMNLSGESVGTIVSYYKIPVK 110
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+VLV DD+ LP L+L GGHGGHNG+KSV+N+F+GN F RLRIGIGRPPG+MDP
Sbjct: 111 QVLVIVDDLDLPFAKLQLLPKGGHGGHNGMKSVINHFKGNTGFPRLRIGIGRPPGKMDPV 170
Query: 121 AFLLQKFN 128
AF+L F
Sbjct: 171 AFVLHTFT 178
>gi|413946361|gb|AFW79010.1| hypothetical protein ZEAMMB73_673090 [Zea mays]
Length = 256
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 118/165 (71%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MIDA AE++GIS+++ KA G+G +GD PV+LAKPQT+MN SGES G L +Y+K+PLN
Sbjct: 85 MIDAIAEAEGISVSSKQFKAIVGKGLIGDVPVMLAKPQTFMNASGESVGQLVSYFKIPLN 144
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+++V +DD+ LP LRL GGHGGHNG++S++++ +R+F RLRIGIGRPP ++
Sbjct: 145 QLVVIYDDLDLPFAKLRLLPKGGHGGHNGMRSIVDHLNQSRDFGRLRIGIGRPPEELGAI 204
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQ 165
F+L+ F +E ++ Q ++ +++++ +G +SA+ NT Q
Sbjct: 205 NFVLRSFTKQEKEELEVTFQRSLQAVRIMVREGFNKSAQFVNTPQ 249
>gi|326501542|dbj|BAK02560.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 257
Score = 172 bits (435), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 117/163 (71%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MIDA AE++GIS++T K+ G+G +GD PV+LAKPQT+MN SGES G L +Y+K+PLN
Sbjct: 80 MIDAIAEAEGISVSTKQFKSMVGKGLIGDVPVMLAKPQTFMNASGESVGQLVSYFKIPLN 139
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+V++ +DD+ LP LRL GGHGGHNG++SV+++ + +R+F RLRIGIGRP G M
Sbjct: 140 QVVLIYDDLDLPFAKLRLLPKGGHGGHNGVRSVIHHLKQSRDFPRLRIGIGRPTGMMGAI 199
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
F+L+ F+ +E +D+ G+ ++++L +G +SA NT
Sbjct: 200 GFVLRAFSKEEQEELDSTFLRGLRAVRIMLLEGFNKSATFVNT 242
>gi|125553210|gb|EAY98919.1| hypothetical protein OsI_20874 [Oryza sativa Indica Group]
Length = 235
Score = 171 bits (434), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 117/165 (70%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MIDA AE++GIS+++ K+ G+G +GD PV+LAKPQTYMN SGES L +Y+K+PL+
Sbjct: 64 MIDAIAEAEGISVSSKQFKSMVGKGLIGDVPVMLAKPQTYMNASGESVAQLVSYFKIPLS 123
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+VLV +DD+ +P LRL GGHGGHNG++S++N+ + +R+F RLRIGIGRP G++D
Sbjct: 124 QVLVIYDDLDIPFAKLRLLPKGGHGGHNGMRSIINHLKQSRDFPRLRIGIGRPTGKLDAI 183
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQ 165
F+L+ F +E ++ + ++ ++++L +G + A NT Q
Sbjct: 184 GFVLRSFTKEEQEELNLTINRSLQAVRIMLLEGFNKGATFVNTPQ 228
>gi|326514970|dbj|BAJ99846.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 231
Score = 171 bits (434), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 117/163 (71%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MIDA AE++GIS++T K+ G+G +GD PV+LAKPQT+MN SGES G L +Y+K+PLN
Sbjct: 54 MIDAIAEAEGISVSTKQFKSMVGKGLIGDVPVMLAKPQTFMNASGESVGQLVSYFKIPLN 113
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+V++ +DD+ LP LRL GGHGGHNG++SV+++ + +R+F RLRIGIGRP G M
Sbjct: 114 QVVLIYDDLDLPFAKLRLLPKGGHGGHNGVRSVIHHLKQSRDFPRLRIGIGRPTGMMGAI 173
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
F+L+ F+ +E +D+ G+ ++++L +G +SA NT
Sbjct: 174 GFVLRAFSKEEQEELDSTFLRGLRAVRIMLLEGFNKSATFVNT 216
>gi|357132680|ref|XP_003567957.1| PREDICTED: peptidyl-tRNA hydrolase, mitochondrial-like
[Brachypodium distachyon]
Length = 256
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/163 (47%), Positives = 117/163 (71%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MIDA AE++GIS++ KA G+G +GD PV+LAKPQT+MN SGES G L +Y+K+PLN
Sbjct: 85 MIDAIAEAEGISISNRQFKAMVGKGLIGDVPVMLAKPQTFMNASGESVGMLVSYFKIPLN 144
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+V+V +DD+ LP L L GGHGGHNG++SV+++F+ R+F RLRIGIGRP G +
Sbjct: 145 QVVVIYDDLDLPFAKLHLLPKGGHGGHNGMRSVIHHFKNTRDFPRLRIGIGRPTGMLGAI 204
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
F+L+ F+ +E +++ +G++ ++++L +G +SA NT
Sbjct: 205 NFVLRSFSQQEQEELNSTFCKGLQAVRIMLLEGFNKSATFVNT 247
>gi|357518883|ref|XP_003629730.1| Peptidyl-tRNA hydrolase [Medicago truncatula]
gi|355523752|gb|AET04206.1| Peptidyl-tRNA hydrolase [Medicago truncatula]
Length = 403
Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/111 (71%), Positives = 85/111 (76%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MIDAFAESQGI+M+TVHCKA FG+GFVGD PV LAKPQTYMNLSGES GPLAAYYKLPLN
Sbjct: 41 MIDAFAESQGIAMDTVHCKAIFGKGFVGDVPVFLAKPQTYMNLSGESAGPLAAYYKLPLN 100
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIG 111
+VLVFHDDM LPCGVLRL GGHG H G N R + + IG
Sbjct: 101 QVLVFHDDMNLPCGVLRLNDKGGHGSHKGKTMANNAIRSQKANTHISFPIG 151
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 71/88 (80%)
Query: 90 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 149
LKSV+ NFR N EF RLRIGIG+PPGQMDPKAFLLQKFN AR+RID ALQEGV+ LKLL
Sbjct: 250 LKSVIYNFRDNSEFPRLRIGIGKPPGQMDPKAFLLQKFNVTARQRIDEALQEGVDALKLL 309
Query: 150 LSKGLTESARHFNTIQKYKHIRLQNMPA 177
L GL SA+ FN QKYKH+++Q +P
Sbjct: 310 LFIGLEVSAKRFNKEQKYKHLKVQTLPV 337
>gi|302757433|ref|XP_002962140.1| hypothetical protein SELMODRAFT_71323 [Selaginella moellendorffii]
gi|300170799|gb|EFJ37400.1| hypothetical protein SELMODRAFT_71323 [Selaginella moellendorffii]
Length = 177
Score = 165 bits (417), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 102/153 (66%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A + I +NT+ CKA G+G + PVLL KPQTYMNLSG++ PLA YY++ +
Sbjct: 25 IDLLALQENIKLNTIQCKALVGKGMIEGVPVLLVKPQTYMNLSGDAVSPLALYYRVKPDN 84
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+LV HDDM L +++ GG GGHNG+++++ F+ N+ RLRIGIGRPPG MDPKA
Sbjct: 85 ILVIHDDMNLDVAAMKMVPKGGPGGHNGMRNIIERFKDNKNIPRLRIGIGRPPGAMDPKA 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 154
++LQKF + ID + G + ++L++S G
Sbjct: 145 YVLQKFTQREKVEIDVCYERGADAVRLIMSDGF 177
>gi|302763245|ref|XP_002965044.1| hypothetical protein SELMODRAFT_37138 [Selaginella moellendorffii]
gi|300167277|gb|EFJ33882.1| hypothetical protein SELMODRAFT_37138 [Selaginella moellendorffii]
Length = 177
Score = 165 bits (417), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 102/153 (66%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A + I +NT+ CKA G+G + PVLL KPQTYMNLSG++ PLA YY++ +
Sbjct: 25 IDLLALQENIKLNTIQCKALVGKGMIEGVPVLLVKPQTYMNLSGDAVSPLALYYRVKPDN 84
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+LV HDDM L +++ GG GGHNG+++++ F+ N+ RLRIGIGRPPG MDPKA
Sbjct: 85 ILVIHDDMDLDVAAMKMVPKGGPGGHNGMRNIIERFKDNKNIPRLRIGIGRPPGAMDPKA 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 154
++LQKF + ID + G + ++L++S G
Sbjct: 145 YVLQKFTQREKVEIDVCYERGADAVRLIMSDGF 177
>gi|6714302|gb|AAF25998.1|AC013354_17 F15H18.8 [Arabidopsis thaliana]
Length = 777
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/142 (50%), Positives = 99/142 (69%), Gaps = 17/142 (11%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
M+DA A+++GISMNTV+ KA FG+G +G+ P++LAKPQT+MNLSGES
Sbjct: 118 MVDALADAEGISMNTVNFKALFGKGVIGNIPIMLAKPQTFMNLSGESV------------ 165
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+DD+ LP G LRL GGHGGHNG++S+++ +G+R+F RLRIGIGRPPG+MD
Sbjct: 166 -----YDDLDLPFGKLRLLPKGGHGGHNGMRSIIDRLKGSRDFPRLRIGIGRPPGKMDTA 220
Query: 121 AFLLQKFNAIARERIDTALQEG 142
F+L++FN +E +D Q G
Sbjct: 221 NFVLRQFNRQEQEELDHTFQTG 242
>gi|356527496|ref|XP_003532345.1| PREDICTED: chloroplastic group IIB intron splicing facilitator
CRS2-B, chloroplastic-like, partial [Glycine max]
Length = 204
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 112/174 (64%), Gaps = 9/174 (5%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFV--GDAPVLLAKPQTYMNLSGESTG---PLAAYY 55
+ID + ++GI +NT+ KA G + + P+LLAKPQTYMN SGES PLAAYY
Sbjct: 32 IIDILSRAEGIQINTIQSKALIGISVLLEIEVPILLAKPQTYMNFSGESVSWAMPLAAYY 91
Query: 56 KLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPG 115
+LPL +L+ + + +LRL+ GGHG HNGLK+VM + G +F RL +GIG PPG
Sbjct: 92 QLPLRHILL----VCISYVILRLQPKGGHGHHNGLKNVMGHLDGCSDFPRLAVGIGNPPG 147
Query: 116 QMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKH 169
MD +A+LLQKF+ R++ID +L++ V ++ ++ G + FN QKYK+
Sbjct: 148 TMDLRAYLLQKFSVEERKQIDASLEQAVGAVRTVVLNGFDQHVNRFNLGQKYKY 201
>gi|374854021|dbj|BAL56914.1| aminoacyl-tRNA hydrolase [uncultured prokaryote]
Length = 235
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 102/163 (62%), Gaps = 1/163 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+++ FA++ ++ + +A +G + V+LAKPQT+MNLSG S PL +YY++PLN
Sbjct: 62 VVEVFAQAHQMAFRRILHQALIAEGRLAGQRVILAKPQTFMNLSGRSVRPLVSYYRVPLN 121
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
R+LV +DDM LP G +RLR G GGHNG+KS++ G EF RLRIGIGRPPG M+P
Sbjct: 122 RLLVVYDDMDLPLGAIRLRPRGSPGGHNGMKSIVQAL-GTMEFPRLRIGIGRPPGHMNPA 180
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++LQ F E ++ L + ++ + +GL + FN
Sbjct: 181 DYVLQDFRPDEEEILEGVLHRATQAIRTFIEEGLEAAMNRFNA 223
>gi|359476471|ref|XP_002265105.2| PREDICTED: uncharacterized protein LOC100244524 [Vitis vinifera]
Length = 313
Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 70/111 (63%), Positives = 82/111 (73%), Gaps = 2/111 (1%)
Query: 9 QGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDD 68
Q I M+TVH K F QG GD PV LAKP TYM+LSG+S GPLAAY KLPL+ V+VFHDD
Sbjct: 136 QEIPMDTVHYKEFFRQGCAGDVPVFLAKPWTYMDLSGKSAGPLAAYCKLPLDSVVVFHDD 195
Query: 69 MGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
+GLP G+LRL H GG HNGL SV+ FRGNREF R R+ +G+P +DP
Sbjct: 196 IGLPWGLLRLHHKGGRRNHNGLMSVILYFRGNREFLRPRVDVGKP--VIDP 244
>gi|90657669|gb|ABD96967.1| hypothetical protein [Cleome spinosa]
Length = 257
Score = 141 bits (356), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 76/161 (47%), Positives = 100/161 (62%), Gaps = 8/161 (4%)
Query: 20 ATFGQGFVGDAPVLLAKPQTYMNLSGE-STGPLAAYYKLPLN-------RVLVFHDDMGL 71
A F G + + PVLLAKPQTYMN SG S L++ ++ + +D+M L
Sbjct: 97 AAFSTGAIEEVPVLLAKPQTYMNFSGWISRCTLSSAFETHFAGKPHLVPHCSLIYDEMSL 156
Query: 72 PCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIA 131
P GVL+L GG+G HNGLKSV+ N G R F RL IGIG+PPG MD KAFLLQKF+ +
Sbjct: 157 PNGVLKLIPKGGYGHHNGLKSVIGNLNGRRHFPRLCIGIGKPPGMMDLKAFLLQKFSPVE 216
Query: 132 RERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHIRL 172
R+++D L++G E +K L+ G E FN +QKYK R+
Sbjct: 217 RKQMDEGLEQGAEAVKTLVLNGFNEGISRFNLVQKYKFHRV 257
>gi|320161445|ref|YP_004174669.1| peptidyl-tRNA hydrolase [Anaerolinea thermophila UNI-1]
gi|319995298|dbj|BAJ64069.1| peptidyl-tRNA hydrolase [Anaerolinea thermophila UNI-1]
Length = 208
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 95/161 (59%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A++ I+ V KA G ++LAKPQTYMNLSG+S LA +YK+P +
Sbjct: 42 IDRLAKALLITPGRVQSKAIIATGQYAGKRLILAKPQTYMNLSGQSVKGLAQFYKIPPEQ 101
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+LV HDD+ LP G LRLR GG G G+ S++ G +F RLRIGIGRPPGQMDP A
Sbjct: 102 ILVAHDDLDLPLGTLRLRPGGGSAGQKGVSSIIQQL-GTSQFCRLRIGIGRPPGQMDPAA 160
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++LQ F+ +E +D + V+ + G+ + FN
Sbjct: 161 YVLQDFSEKEKEILDEVMDRAVKAALRFVEAGIQTAMNEFN 201
>gi|384246371|gb|EIE19861.1| peptidyl-tRNA hydrolase [Coccomyxa subellipsoidea C-169]
Length = 198
Score = 138 bits (347), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 104/163 (63%), Gaps = 8/163 (4%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTG-----PLAAYY 55
++D A G S++ + A G+G VLLAKP T+MN SGES PLA
Sbjct: 32 LVDELARQLGASLDKLQHSAALGRGRFCGKRVLLAKPMTFMNNSGESANLKRLFPLA--- 88
Query: 56 KLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPG 115
++PL RVLV +DD+ L G +RLR GGHGGHNG++S+ +F G+++F RLRIGIGRPPG
Sbjct: 89 QVPLERVLVVYDDLDLDSGAVRLRAKGGHGGHNGMRSITQHFSGSKDFPRLRIGIGRPPG 148
Query: 116 QMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 158
+++LQ F R+ I A+QEG+++++ +L+ G+ ++
Sbjct: 149 SQQVVSYVLQGFGRKERDEIYVAIQEGIDIVRAVLTLGMEKAV 191
>gi|414866787|tpg|DAA45344.1| TPA: hypothetical protein ZEAMMB73_274141 [Zea mays]
Length = 151
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/91 (74%), Positives = 73/91 (80%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MIDAFA+SQGI + T + KA FG+G V PVLLAKPQTYMNLSGES GPLAAYYKLPLN
Sbjct: 60 MIDAFAQSQGIPLTTHYFKALFGEGMVDGVPVLLAKPQTYMNLSGESVGPLAAYYKLPLN 119
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
RVLV DDM LPCGVLRL+ GG G HNGL
Sbjct: 120 RVLVAFDDMDLPCGVLRLQPKGGSGRHNGLS 150
>gi|414866789|tpg|DAA45346.1| TPA: hypothetical protein ZEAMMB73_274141 [Zea mays]
Length = 152
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 67/89 (75%), Positives = 72/89 (80%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MIDAFA+SQGI + T + KA FG+G V PVLLAKPQTYMNLSGES GPLAAYYKLPLN
Sbjct: 60 MIDAFAQSQGIPLTTHYFKALFGEGMVDGVPVLLAKPQTYMNLSGESVGPLAAYYKLPLN 119
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNG 89
RVLV DDM LPCGVLRL+ GG G HNG
Sbjct: 120 RVLVAFDDMDLPCGVLRLQPKGGSGRHNG 148
>gi|72160821|ref|YP_288478.1| peptidyl-tRNA hydrolase [Thermobifida fusca YX]
gi|119391031|sp|Q47SW2.1|PTH_THEFY RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|71914553|gb|AAZ54455.1| peptidyl-tRNA hydrolase [Thermobifida fusca YX]
Length = 213
Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 101/157 (64%), Gaps = 1/157 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A +G A + VGDAPV+LAKP +YMNLSG L+A+YK+P++
Sbjct: 58 VVDELAAQRGERWRLHKAHAQVVETRVGDAPVVLAKPASYMNLSGGPVAKLSAFYKVPVD 117
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
R++V HD++ +P L+L+ GG GHNGL+S+ + G+ ++ R+R+GIGRPPG+MD
Sbjct: 118 RIIVVHDELDIPFARLKLKRGGGSAGHNGLRSITASL-GSPDYVRVRVGIGRPPGRMDAA 176
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 157
+F+LQ F+ R+ +D + + ++ +++ GL ++
Sbjct: 177 SFVLQDFSTAERKELDVHVARAADAVETVVTSGLEKA 213
>gi|115453001|ref|NP_001050101.1| Os03g0347800 [Oryza sativa Japonica Group]
gi|122247022|sp|Q10LI6.1|CRS2L_ORYSJ RecName: Full=CRS2-like protein, chloroplastic; AltName:
Full=Chloroplastic RNA splicing factor 2-like protein;
Flags: Precursor
gi|108708119|gb|ABF95914.1| Peptidyl-tRNA hydrolase, putative, expressed [Oryza sativa Japonica
Group]
gi|113548572|dbj|BAF12015.1| Os03g0347800 [Oryza sativa Japonica Group]
gi|215707163|dbj|BAG93623.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 186
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 66/89 (74%), Positives = 71/89 (79%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MID FA+SQGIS+ KA FG+G V PVLLAKPQTYMNLSGES GPLAAYYKLPLN
Sbjct: 84 MIDMFAQSQGISLTRHPFKALFGEGMVEGVPVLLAKPQTYMNLSGESVGPLAAYYKLPLN 143
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNG 89
RVLV DDM LPCGVLRL+ GG+G HNG
Sbjct: 144 RVLVAFDDMDLPCGVLRLQPKGGYGRHNG 172
>gi|159487239|ref|XP_001701641.1| predicted protein [Chlamydomonas reinhardtii]
gi|158280860|gb|EDP06616.1| predicted protein [Chlamydomonas reinhardtii]
Length = 172
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 88/140 (62%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A + GI + A G+G + VLL KP T+MN SGES LA +Y++P
Sbjct: 25 VIDELAAAAGIDCRKLEKSAAVGKGELQGKQVLLVKPVTFMNNSGESVAALAKFYRVPPG 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
RVLV DD+ P +RLR GGHGGHNGL+S+++ G ++F R++IGIGRP G +
Sbjct: 85 RVLVVADDLDQPTAQVRLRQRGGHGGHNGLRSIIDRMGGTQDFPRIKIGIGRPSGPIPIA 144
Query: 121 AFLLQKFNAIARERIDTALQ 140
+++LQ FN R IDTA+Q
Sbjct: 145 SYVLQPFNKAERPEIDTAVQ 164
>gi|325110026|ref|YP_004271094.1| peptidyl-tRNA hydrolase [Planctomyces brasiliensis DSM 5305]
gi|324970294|gb|ADY61072.1| peptidyl-tRNA hydrolase [Planctomyces brasiliensis DSM 5305]
Length = 192
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 91/145 (62%), Gaps = 1/145 (0%)
Query: 19 KATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRL 78
+A + V LL PQT+MNLSG S G L +YK+ L +LV DD+ LPCG LRL
Sbjct: 43 EAEIAEVHVAGEKTLLVAPQTFMNLSGRSVGSLVKFYKVDLEDLLVISDDLNLPCGQLRL 102
Query: 79 RHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTA 138
R +G GG G++ ++ + G +F RLR+GIGRPPG+MD F+L++F A RE +D
Sbjct: 103 RASGSSGGQKGIRDIIAHL-GTEDFPRLRVGIGRPPGRMDVSTFVLKRFLAEERETMDLT 161
Query: 139 LQEGVEVLKLLLSKGLTESARHFNT 163
+++ V+ ++L L +G+T + NT
Sbjct: 162 VRDAVDAVELWLREGVTAAMNKVNT 186
>gi|255634128|gb|ACU17427.1| unknown [Glycine max]
Length = 179
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/106 (57%), Positives = 78/106 (73%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID+ + ++GI MNT+ KA G G +G+ P+LLAKPQTYMN SGES GPLAAYY++PL
Sbjct: 73 IIDSLSRAEGIQMNTIQSKALIGIGSIGEVPILLAKPQTYMNFSGESVGPLAAYYQVPLR 132
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARL 106
+L+ D+ LP GVLRL+ NGGHG HNGLK+VM + G F RL
Sbjct: 133 HILLVFDETSLPNGVLRLQPNGGHGHHNGLKNVMGHLDGCSAFPRL 178
>gi|366163463|ref|ZP_09463218.1| peptidyl-tRNA hydrolase [Acetivibrio cellulolyticus CD2]
Length = 190
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 98/162 (60%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID ++ I++ V KA G G + A V+L KPQT+MNLSGES + +YK+P+
Sbjct: 29 IDRLSKKHNIAVTKVKHKAVIGDGTIEGARVILVKPQTFMNLSGESVREIMEWYKIPVEN 88
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+++ +DD+ LP G LR+R G G HNG++SV+ + + +F R+RIG+ +PP D
Sbjct: 89 IIIVYDDIDLPVGKLRVRPKGSAGTHNGMRSVIYQIQSD-DFPRIRIGVDKPPQGWDLAN 147
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
F+L KF+ R+ ++ A++ V ++ ++ G+ + FNT
Sbjct: 148 FVLSKFSPDERKNVEEAIENAVGAVETIIKSGVDNAMNRFNT 189
>gi|225433776|ref|XP_002268699.1| PREDICTED: uncharacterized protein LOC100253226 [Vitis vinifera]
Length = 518
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/81 (74%), Positives = 64/81 (79%)
Query: 13 MNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLP 72
M+ VH KA FGQGFVGD V LA P TYMNLSGES GPLAAYYKLPLNR++VFHDD LP
Sbjct: 1 MDIVHHKAIFGQGFVGDVLVFLANPHTYMNLSGESVGPLAAYYKLPLNRMVVFHDDKSLP 60
Query: 73 CGVLRLRHNGGHGGHNGLKSV 93
CGVL L H GGHG HNG + V
Sbjct: 61 CGVLCLHHKGGHGSHNGRRIV 81
>gi|389571465|ref|ZP_10161560.1| peptidyl-tRNA hydrolase [Bacillus sp. M 2-6]
gi|388428865|gb|EIL86655.1| peptidyl-tRNA hydrolase [Bacillus sp. M 2-6]
Length = 188
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 92/161 (57%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID ++ I +N +G GFV VLL KP TYMNLSGE PL YY++PL
Sbjct: 26 IDELSKKWDIPLNQSKFHGQYGTGFVSGQKVLLVKPLTYMNLSGECVRPLMDYYEIPLEH 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+ V +DD+ LP G +RLR G GGHNG+KS++ + G+ EF R RIGIGRP M
Sbjct: 86 LKVIYDDLDLPTGRIRLRTKGSAGGHNGIKSLIQHL-GSPEFDRFRIGIGRPQNGMKVVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F+ + I +A+Q VE + L+K E FN
Sbjct: 145 YVLGRFSEEEQPDISSAIQASVEACEAALTKPFLEVMNDFN 185
>gi|374711150|ref|ZP_09715584.1| peptidyl-tRNA hydrolase [Sporolactobacillus inulinus CASD]
Length = 189
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 96/164 (58%), Gaps = 2/164 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID +E + I + A FG+G +GD VLL KP TYMN SGE+ GPL ++KL
Sbjct: 25 VIDYLSEQESIRLTKNKFNALFGKGKIGDTDVLLVKPLTYMNASGEAVGPLLHFFKLDTA 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV DDM LP G +RLR G GGHNG+KSV+ + G +EFAR+++GIG P +
Sbjct: 85 DLLVIQDDMDLPIGKIRLRQKGSAGGHNGIKSVIQHV-GTQEFARIKVGIGHPQHTREAV 143
Query: 121 A-FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++LQ F R ID A++ +K L++ ++ +N+
Sbjct: 144 VRYVLQGFQGDDRAAIDAAIERSTSAVKAWLTQPFSQVMNMYNS 187
>gi|194017971|ref|ZP_03056578.1| peptidyl-tRNA hydrolase [Bacillus pumilus ATCC 7061]
gi|194010308|gb|EDW19883.1| peptidyl-tRNA hydrolase [Bacillus pumilus ATCC 7061]
Length = 188
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 91/161 (56%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID ++ I +N FG GFV VLL KP TYMNLSGE PL YY +PL
Sbjct: 26 IDELSKKWDIPLNQSKFNGLFGTGFVSGQKVLLVKPLTYMNLSGECVRPLMDYYDIPLEH 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+ V +DD+ LP G +RLR G GGHNG+KS++ + G+ EF R RIGIGRP M
Sbjct: 86 LKVIYDDLDLPTGRIRLRTKGSAGGHNGIKSLIQHL-GSPEFDRFRIGIGRPQNGMKVVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F+ + I +A+Q VE + L+K E FN
Sbjct: 145 YVLGRFSEEEQPDIASAIQASVEACEAALTKPFLEVMNDFN 185
>gi|157690835|ref|YP_001485297.1| peptidyl-tRNA hydrolase [Bacillus pumilus SAFR-032]
gi|167011990|sp|A8F920.1|PTH_BACP2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|157679593|gb|ABV60737.1| stage V sporulation aminoacyl-tRNA hydrolase [Bacillus pumilus
SAFR-032]
Length = 188
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 91/161 (56%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID ++ I +N FG GFV VLL KP TYMNLSGE PL YY +PL
Sbjct: 26 IDELSKKWDIPLNQSKFHGQFGTGFVSGQKVLLVKPLTYMNLSGECVRPLMDYYDIPLEH 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+ V +DD+ LP G +RLR G GGHNG+KS++ + G+ EF R RIGIGRP M
Sbjct: 86 LKVIYDDLDLPTGRIRLRTKGSAGGHNGIKSLIQHL-GSPEFDRFRIGIGRPQNGMKVVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F+ + I +A+Q VE + L+K E FN
Sbjct: 145 YVLGRFSEEEQPDIASAIQASVEACEAALTKPFLEVMNDFN 185
>gi|407979090|ref|ZP_11159912.1| peptidyl-tRNA hydrolase [Bacillus sp. HYC-10]
gi|407414306|gb|EKF35959.1| peptidyl-tRNA hydrolase [Bacillus sp. HYC-10]
Length = 188
Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 91/161 (56%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID ++ I +N +G GFV VLL KP TYMNLSGE PL YY +PL
Sbjct: 26 IDELSKKWDIPLNQSKFHGQYGTGFVSGQKVLLVKPLTYMNLSGECVRPLMDYYDIPLEN 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+ V +DD+ LP G +RLR G GGHNG+KS++ + G+ EF R RIGIGRP M
Sbjct: 86 LKVIYDDLDLPTGRIRLRTKGSAGGHNGIKSLIQHL-GSPEFDRFRIGIGRPQNGMKVVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F+ + I +A+Q VE + L+K E FN
Sbjct: 145 YVLGRFSDEEQPDISSAIQASVEACEAALTKPFLEVMNDFN 185
>gi|358061579|ref|ZP_09148233.1| peptidyl-tRNA hydrolase [Clostridium hathewayi WAL-18680]
gi|356700338|gb|EHI61844.1| peptidyl-tRNA hydrolase [Clostridium hathewayi WAL-18680]
Length = 191
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 102/163 (62%), Gaps = 1/163 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ GI ++ +A G+G + V+LAKPQT+MNLSGES + +YK+ +
Sbjct: 25 VIDVLADRIGIDVSEKKHRALCGKGMLEGQKVILAKPQTFMNLSGESVRAMVDFYKVSPD 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V++ +DD+ L G LR+R G GGHNG+K+++ + G +EF R+++G+G P MD
Sbjct: 85 EVIIVYDDISLEPGQLRIRTKGSAGGHNGIKNIIAHL-GTQEFPRIKVGVGEKPKYMDLA 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F+ +E +D A +E + + +++S+G+ + HFN
Sbjct: 144 DYVLSRFSKGEQELMDDAFREAADAVAMMISEGMDAAMNHFNA 186
>gi|302836311|ref|XP_002949716.1| hypothetical protein VOLCADRAFT_59597 [Volvox carteri f.
nagariensis]
gi|300265075|gb|EFJ49268.1| hypothetical protein VOLCADRAFT_59597 [Volvox carteri f.
nagariensis]
Length = 223
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 86/140 (61%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A GI + A G+G V VLL KP T+MN SGES LA +Y++P +
Sbjct: 82 VIDELARQAGIDCRKLEKSAAVGKGEVHGKQVLLVKPVTFMNNSGESVAALAKFYRVPPS 141
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
RVLV DD+ P +R+R GGHGGHNGL+S+++ G ++F R+++GIGRP G M
Sbjct: 142 RVLVVSDDLDQPVAQVRIRAKGGHGGHNGLRSIIDRMGGAQDFPRIKVGIGRPSGPMPIA 201
Query: 121 AFLLQKFNAIARERIDTALQ 140
++LQ F+ R ID A+Q
Sbjct: 202 TYVLQPFSKAERPDIDLAVQ 221
>gi|383763137|ref|YP_005442119.1| peptidyl-tRNA hydrolase [Caldilinea aerophila DSM 14535 = NBRC
104270]
gi|381383405|dbj|BAM00222.1| peptidyl-tRNA hydrolase [Caldilinea aerophila DSM 14535 = NBRC
104270]
Length = 193
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 101/166 (60%), Gaps = 7/166 (4%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDA----PVLLAKPQTYMNLSGESTGPLAAYYKL 57
I+ A+ GI+++ V +A G GFV VLL KP T+MN SGE+ PLA ++++
Sbjct: 29 IELCAQRWGIALDRVQMRAQTGSGFVMREGLRQKVLLVKPLTFMNASGEAVAPLARFHRI 88
Query: 58 PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQM 117
+ +LV HDD+ LP G LRLR G GG NG++S++ + G +EFAR+R+GIGRPP M
Sbjct: 89 DPSSILVIHDDLDLPAGKLRLRPGGSSGGQNGVRSIIEHL-GTQEFARIRVGIGRPPHGM 147
Query: 118 DPKAFLLQKFNAIARERIDTALQEG-VEVLKLLLSKGLTESARHFN 162
DP A++LQ F+ E I L+E VE L +G+ + FN
Sbjct: 148 DPAAYVLQNFSE-EEEAIFAPLRERVVEAAACWLFEGIERAMNRFN 192
>gi|291522022|emb|CBK80315.1| peptidyl-tRNA hydrolase [Coprococcus catus GD/7]
Length = 190
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 98/165 (59%), Gaps = 1/165 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A I + KA +G G++ V+LAKPQT+MNLSGES L+ YYK+P
Sbjct: 26 IDRIAAENQIRVEEKKHKALYGSGYIEGEKVILAKPQTFMNLSGESVRELSDYYKIPAEN 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DD+ L G LR+R G GGHNG+K+++ + G F R+++G+G P D
Sbjct: 86 IIVIYDDISLDVGQLRIREKGSAGGHNGIKNIILHL-GTEVFPRIKVGVGEKPKGWDLAD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 166
++L +++A R+ ID A +E E +K+++ + + +NT +K
Sbjct: 145 YVLGRYSAEDRKIIDEAQKEAAEAVKMMVMDDVRGAMNRYNTKKK 189
>gi|116751072|ref|YP_847759.1| peptidyl-tRNA hydrolase [Syntrophobacter fumaroxidans MPOB]
gi|116700136|gb|ABK19324.1| peptidyl-tRNA hydrolase [Syntrophobacter fumaroxidans MPOB]
Length = 201
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 97/162 (59%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A GI+M +A++G GFV VLLAKP TYMNLSG + G + Y+ P
Sbjct: 35 VVDRLAAGFGIAMQERKFRASWGTGFVEGRKVLLAKPLTYMNLSGAAVGEILKYFGFPSE 94
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
RVLV HDD+ LPCG +RL GG GGH G+ S+M + R+F RL++GIGRP +
Sbjct: 95 RVLVVHDDLDLPCGRVRLARKGGAGGHKGIASIMAHLN-TRDFPRLKLGIGRPLHGEPVE 153
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+++LQ A + + + G EV++ +L+ GL+ S +N
Sbjct: 154 SYVLQPPYAEDARKFEDMILLGEEVVRSVLAAGLSSSMNDYN 195
>gi|415883946|ref|ZP_11545975.1| peptidyl-tRNA hydrolase [Bacillus methanolicus MGA3]
gi|387591741|gb|EIJ84058.1| peptidyl-tRNA hydrolase [Bacillus methanolicus MGA3]
Length = 186
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 93/162 (57%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID +ES I ++ K +G GFV ++L KP TYMNLSGES + YY + L
Sbjct: 25 VIDRLSESLKIPLDQAKLKGIYGMGFVNGEKLILLKPLTYMNLSGESIRAVMDYYDIALE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV +DD+ LP G +RLR G GGHNG+KS + + G++EF R+R+GI RPP M
Sbjct: 85 DLLVIYDDLDLPVGKIRLRQKGSAGGHNGMKSTIAHL-GSQEFNRIRVGIDRPPAGMSVV 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F +E +D +++ E + L K + +N
Sbjct: 144 DYVLDRFREDEQEIMDDVIKKCAEACEAWLQKPFIQVMNEYN 185
>gi|218197382|gb|EEC79809.1| hypothetical protein OsI_21248 [Oryza sativa Indica Group]
gi|222632792|gb|EEE64924.1| hypothetical protein OsJ_19784 [Oryza sativa Japonica Group]
Length = 125
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 85/123 (69%), Gaps = 7/123 (5%)
Query: 37 PQTYMNLS--GES---TGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
P +NL+ GE+ GPLAAYYKLPLNRVLV D LPCG+LRL+ GG G HNG
Sbjct: 5 PTFILNLAKLGEAKTQVGPLAAYYKLPLNRVLVAFDGTDLPCGILRLQPKGGFGRHNG-- 62
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
SV E GIG PPGQMDPKAF+LQKFN + ERID+A++EGVE+LKL+++
Sbjct: 63 SVDFVTMCFNEVICHSKGIGCPPGQMDPKAFVLQKFNKTSLERIDSAIEEGVEILKLVVT 122
Query: 152 KGL 154
KGL
Sbjct: 123 KGL 125
>gi|288921323|ref|ZP_06415605.1| peptidyl-tRNA hydrolase [Frankia sp. EUN1f]
gi|288347297|gb|EFC81592.1| peptidyl-tRNA hydrolase [Frankia sp. EUN1f]
Length = 195
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 100/163 (61%), Gaps = 1/163 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D AE G + + +A Q + P +LA+P+T+MN+SG L A+YK+ +
Sbjct: 33 VVDLLAERTGARLRSHRSRADVDQVRLAGRPAVLARPRTFMNVSGPPAAALRAFYKVDVA 92
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V+V HD++ +P G +RL+ GG GHNGL+S+ ++ G+R++ R+R+GIGRPPG+MDP
Sbjct: 93 HVIVVHDELDIPFGAIRLKRGGGDNGHNGLRSITSSL-GSRDYLRVRVGIGRPPGRMDPA 151
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
F+L+ F+ + R+ + + + ++ LL + L+ F+
Sbjct: 152 DFVLRDFSTVERKELPLLVDSAADAVESLLQEELSAVQNRFHA 194
>gi|152973899|ref|YP_001373416.1| peptidyl-tRNA hydrolase [Bacillus cytotoxicus NVH 391-98]
gi|189038278|sp|A7GJW3.1|PTH_BACCN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|152022651|gb|ABS20421.1| Aminoacyl-tRNA hydrolase [Bacillus cytotoxicus NVH 391-98]
Length = 186
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 91/162 (56%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ L
Sbjct: 26 IDELAKRWNISLNEQKFKGMFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDLED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++ +DD+ LP G LRLR G GGHNG+KS + + G +EF R+R+GI RP M
Sbjct: 86 FIIMYDDLDLPVGKLRLRMKGSAGGHNGVKSTIAHL-GTQEFQRIRMGIDRPKNGMKVVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F A ++ A+++ + L+K + FN
Sbjct: 145 YVLGRFTAEEMVDVNHAIEKAANACEEWLNKSFLQVMNDFNN 186
>gi|291298816|ref|YP_003510094.1| peptidyl-tRNA hydrolase [Stackebrandtia nassauensis DSM 44728]
gi|290568036|gb|ADD41001.1| peptidyl-tRNA hydrolase [Stackebrandtia nassauensis DSM 44728]
Length = 213
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 99/168 (58%), Gaps = 4/168 (2%)
Query: 3 DAFAESQGISMN---TVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPL 59
D AE G SM V + G+ +G V+L KP TYMN+SG++ PLA ++K+P
Sbjct: 31 DLLAERVGGSMKRAAKVRAEVCQGRLSIGGPQVILVKPLTYMNVSGQAVAPLAVFFKVPA 90
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
R++V HD++ LP GV+RL+ GG GHNGLKS G++ + R R GIGRPPG++DP
Sbjct: 91 ERIIVVHDELDLPYGVVRLKAGGGENGHNGLKSTSQAL-GDKGYVRARFGIGRPPGRIDP 149
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKY 167
AF+L+ F+ ++ + + + + ++ GL ++ F+ + Y
Sbjct: 150 AAFVLRDFSPAEKKELPLFVDLTADAVSEVVESGLVKAQNKFHALSLY 197
>gi|117929151|ref|YP_873702.1| peptidyl-tRNA hydrolase [Acidothermus cellulolyticus 11B]
gi|117649614|gb|ABK53716.1| peptidyl-tRNA hydrolase [Acidothermus cellulolyticus 11B]
Length = 196
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 98/168 (58%), Gaps = 3/168 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D AE G+ + G + P +LAKP +YMN SG L Y+++P
Sbjct: 29 VVDLLAERAGMRFTVHRTRTQLANGRLAGQPAMLAKPLSYMNQSGGPVAGLLHYFRIPRE 88
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
R++V HD++ LP GVLR++ GG GHNGL+S+ RG ++ R+R GIGRPP +DP
Sbjct: 89 RLIVVHDELDLPFGVLRVKRGGGDAGHNGLRSITAALRGA-DYLRVRFGIGRPPPHLDPA 147
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL--TESARHFNTIQK 166
++L+ F+A R + L+E +V++ LLS GL T++A H Q+
Sbjct: 148 EYVLRDFSAAERAELGVHLEEAADVVESLLSVGLAATQNAVHGRGRQR 195
>gi|219849378|ref|YP_002463811.1| peptidyl-tRNA hydrolase [Chloroflexus aggregans DSM 9485]
gi|254783860|sp|B8G3X3.1|PTH_CHLAD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|219543637|gb|ACL25375.1| Aminoacyl-tRNA hydrolase [Chloroflexus aggregans DSM 9485]
Length = 188
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 94/164 (57%), Gaps = 2/164 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PLN 60
++ AE G++ K+ +G + V L KPQTYMNLSG++ L +YK+ P
Sbjct: 26 VETLAERHGLTFRNQRAKSEIAEGIIRGQRVALVKPQTYMNLSGQAVAALRQWYKIDPAR 85
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV +DD+ LP LRLR G G HNG++S++ G EF RLRIGIG+PPGQMD
Sbjct: 86 ELLVIYDDLDLPFAKLRLRERGSAGTHNGMRSIVGQL-GTTEFPRLRIGIGQPPGQMDAA 144
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTI 164
++L +F + L + +++++S+GLT + +N +
Sbjct: 145 DYVLSRFTPEEEAVLPEVLARVADAVEVVVSEGLTAAMNRYNPL 188
>gi|297745170|emb|CBI39162.3| unnamed protein product [Vitis vinifera]
Length = 92
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/79 (74%), Positives = 63/79 (79%)
Query: 13 MNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLP 72
M+ VH KA FGQGFVGD V LA P TYMNLSGES GPLAAYYKLPLNR++VFHDD LP
Sbjct: 1 MDIVHHKAIFGQGFVGDVLVFLANPHTYMNLSGESVGPLAAYYKLPLNRMVVFHDDKSLP 60
Query: 73 CGVLRLRHNGGHGGHNGLK 91
CGVL L H GGHG HNG +
Sbjct: 61 CGVLCLHHKGGHGSHNGYE 79
>gi|158312638|ref|YP_001505146.1| peptidyl-tRNA hydrolase [Frankia sp. EAN1pec]
gi|158108043|gb|ABW10240.1| Aminoacyl-tRNA hydrolase [Frankia sp. EAN1pec]
Length = 195
Score = 125 bits (314), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 101/163 (61%), Gaps = 1/163 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D AE G + + +A Q + V+LA+P+T+MN+SG + A+YK+ ++
Sbjct: 33 VVDLLAERTGARLRSHRSRAEIDQVRLAGRSVVLARPRTFMNVSGPPVAAVRAFYKIDVS 92
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
RV+V HD++ +P +RL+ GG GHNGL+S+ ++ G+R++ R+R+GIGRPPG+MDP
Sbjct: 93 RVIVVHDELDIPFDAIRLKRGGGDNGHNGLRSITSSL-GSRDYLRVRVGIGRPPGRMDPA 151
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
F+L+ F+ + R+ + + + ++ LL + L + F+
Sbjct: 152 DFVLRDFSPVERKALPLIVDNAADAVESLLQEELAAAQNRFHA 194
>gi|229083370|ref|ZP_04215721.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock3-44]
gi|228699935|gb|EEL52569.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock3-44]
Length = 186
Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 93/161 (57%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ GIS+N K +G GFV V+L KP TYMNLSGES PL YYK+ +
Sbjct: 26 IDELAKRWGISLNEQKFKGMYGSGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+V +DD+ +P G LRLR G GGHNG+KS +++ G +EF R+R+G+ RP M
Sbjct: 86 FVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGVDRPKNGMKVVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F A ++ ++++ + + L K + FN
Sbjct: 145 YVLGRFTAEELPEVNASIEKAADACEEWLKKPFLQIMNTFN 185
>gi|358463544|ref|ZP_09173579.1| Peptidyl-tRNA hydrolase [Frankia sp. CN3]
gi|357070066|gb|EHI79848.1| Peptidyl-tRNA hydrolase [Frankia sp. CN3]
Length = 195
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 100/164 (60%), Gaps = 1/164 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++DA AE G + + +A Q +G V+LA+ +TYMN+SG L A++K+
Sbjct: 32 VVDALAERHGARLRSHKARADADQIRLGGEAVVLARTRTYMNVSGPPVASLRAFFKVDPA 91
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
R++V HD++ +P G +RL+ GG GHNGL+S+ ++ G R++ R+R GIGRPPG+MDP
Sbjct: 92 RLIVVHDELDIPFGAVRLKRGGGDNGHNGLRSITSSL-GTRDYLRVRFGIGRPPGRMDPA 150
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTI 164
F+L+ F R+ + + + ++ L+ +GL + F+T+
Sbjct: 151 DFVLRDFAVPERKEVPFLVDRAADAVEALVGEGLEPAQNRFHTL 194
>gi|229074113|ref|ZP_04207160.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock4-18]
gi|229094773|ref|ZP_04225779.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock3-29]
gi|229100842|ref|ZP_04231654.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock3-28]
gi|229113726|ref|ZP_04243162.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock1-3]
gi|407708002|ref|YP_006831587.1| oligopeptide transporter, periplasmic-binding protein [Bacillus
thuringiensis MC28]
gi|423376674|ref|ZP_17353958.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG1O-2]
gi|423439768|ref|ZP_17416674.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG4X2-1]
gi|423450071|ref|ZP_17426950.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG5O-1]
gi|423462840|ref|ZP_17439608.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG6O-1]
gi|423532196|ref|ZP_17508614.1| peptidyl-tRNA hydrolase [Bacillus cereus HuB2-9]
gi|423542533|ref|ZP_17518923.1| peptidyl-tRNA hydrolase [Bacillus cereus HuB4-10]
gi|423548764|ref|ZP_17525122.1| peptidyl-tRNA hydrolase [Bacillus cereus HuB5-5]
gi|423621429|ref|ZP_17597207.1| peptidyl-tRNA hydrolase [Bacillus cereus VD148]
gi|228669723|gb|EEL25129.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock1-3]
gi|228682576|gb|EEL36641.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock3-28]
gi|228688641|gb|EEL42513.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock3-29]
gi|228709007|gb|EEL61133.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock4-18]
gi|401127078|gb|EJQ34808.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG5O-1]
gi|401168329|gb|EJQ75594.1| peptidyl-tRNA hydrolase [Bacillus cereus HuB4-10]
gi|401174295|gb|EJQ81506.1| peptidyl-tRNA hydrolase [Bacillus cereus HuB5-5]
gi|401263458|gb|EJR69583.1| peptidyl-tRNA hydrolase [Bacillus cereus VD148]
gi|401641313|gb|EJS59033.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG1O-2]
gi|402421811|gb|EJV54058.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG4X2-1]
gi|402422968|gb|EJV55189.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG6O-1]
gi|402465274|gb|EJV96956.1| peptidyl-tRNA hydrolase [Bacillus cereus HuB2-9]
gi|407385687|gb|AFU16188.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis MC28]
Length = 207
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 95/162 (58%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ ++
Sbjct: 47 IDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVDD 106
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+V +DD+ +P G LRLR G GGHNG+KS +++ G +EF R+R+GI RP M
Sbjct: 107 FVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKNGMKVVD 165
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F + ++ ++++ + + L+K + FN+
Sbjct: 166 YVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQIMNTFNS 207
>gi|163938059|ref|YP_001642943.1| peptidyl-tRNA hydrolase [Bacillus weihenstephanensis KBAB4]
gi|229131059|ref|ZP_04259972.1| Peptidyl-tRNA hydrolase [Bacillus cereus BDRD-ST196]
gi|423456682|ref|ZP_17433532.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG5X1-1]
gi|423471699|ref|ZP_17448443.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG6O-2]
gi|423485303|ref|ZP_17461990.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG6X1-2]
gi|423520191|ref|ZP_17496672.1| peptidyl-tRNA hydrolase [Bacillus cereus HuA2-4]
gi|423556952|ref|ZP_17533255.1| peptidyl-tRNA hydrolase [Bacillus cereus MC67]
gi|163860256|gb|ABY41315.1| Aminoacyl-tRNA hydrolase [Bacillus weihenstephanensis KBAB4]
gi|228652396|gb|EEL08320.1| Peptidyl-tRNA hydrolase [Bacillus cereus BDRD-ST196]
gi|401128429|gb|EJQ36119.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG5X1-1]
gi|401135880|gb|EJQ43476.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG6X1-2]
gi|401155456|gb|EJQ62866.1| peptidyl-tRNA hydrolase [Bacillus cereus HuA2-4]
gi|401194031|gb|EJR01028.1| peptidyl-tRNA hydrolase [Bacillus cereus MC67]
gi|402430797|gb|EJV62871.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG6O-2]
Length = 207
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 93/162 (57%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ +
Sbjct: 47 IDELAKRWSISLNEQKFKGVFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVED 106
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+V +DD+ +P G LRLR G GGHNG+KS +++ G +EF R+R+GI RP M
Sbjct: 107 FIVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKNGMKVVD 165
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F + ++ +++ + + L+K + FN+
Sbjct: 166 YVLGRFTSEEISGVNQSIENAADACEEWLNKPFLQIMNTFNS 207
>gi|228956493|ref|ZP_04118290.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|423632849|ref|ZP_17608594.1| peptidyl-tRNA hydrolase [Bacillus cereus VD154]
gi|228803183|gb|EEM50004.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|401258893|gb|EJR65074.1| peptidyl-tRNA hydrolase [Bacillus cereus VD154]
Length = 207
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 94/162 (58%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ +
Sbjct: 47 IDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVED 106
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+V +DD+ +P G LRLR G GGHNG+KS +++ G +EF R+R+GI RP M
Sbjct: 107 FVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKNGMKVVD 165
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F + ++ ++++ + + L+K + FN+
Sbjct: 166 YVLGRFTSEEITDVNHSIEKAADACEEWLNKPFLQIMNTFNS 207
>gi|423090602|ref|ZP_17078891.1| aminoacyl-tRNA hydrolase [Clostridium difficile 70-100-2010]
gi|357556306|gb|EHJ37921.1| aminoacyl-tRNA hydrolase [Clostridium difficile 70-100-2010]
Length = 186
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 95/162 (58%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ IS+ + KA G+G VG VLL KPQTYMNLSGE+ + YYK+ L+
Sbjct: 25 VIDILAKEYNISVTKIKHKALIGEGRVGTEKVLLVKPQTYMNLSGETLIDIYKYYKVDLS 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ L G +R+R G G HNG+KS+ N G+ +F R+R+G+ +P D
Sbjct: 85 NIVVVYDDIDLEVGKIRIRKKGSGGTHNGMKSITNCL-GSNDFPRVRVGVSKPEAGQDLA 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
F+L +F + I+ AL++ + + ++ + + S +N
Sbjct: 144 DFVLSRFRKEESDNINEALEKAADAIDSIIRENIDMSMNKYN 185
>gi|334338784|ref|YP_004543764.1| peptidyl-tRNA hydrolase [Desulfotomaculum ruminis DSM 2154]
gi|334090138|gb|AEG58478.1| peptidyl-tRNA hydrolase [Desulfotomaculum ruminis DSM 2154]
Length = 187
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 100/165 (60%), Gaps = 5/165 (3%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+IDA A G ++ KA GQ +G V+LAKPQTYMNLSG++ L +YKL
Sbjct: 25 VIDALARELGATVEKNQHKALVGQVNIGSEKVILAKPQTYMNLSGQAVVALMNWYKLLPE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPP-GQMDP 119
+LV DDM LP G LR+R NGG GG GLKS+M + G ++F+R+R+GIGRP G +D
Sbjct: 85 DLLVISDDMDLPPGRLRIRMNGGAGGQKGLKSIM-DLTGTQDFSRMRVGIGRPEHGAVD- 142
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTI 164
+L KF+ ++I A++ V+ K+ + +G E+ +N +
Sbjct: 143 --HVLGKFDDQELQQIQPAIEAAVKAAKIWVLEGPVEAMNQYNRV 185
>gi|423613678|ref|ZP_17589538.1| peptidyl-tRNA hydrolase [Bacillus cereus VD107]
gi|401241367|gb|EJR47758.1| peptidyl-tRNA hydrolase [Bacillus cereus VD107]
Length = 207
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 94/162 (58%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ +
Sbjct: 47 IDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVED 106
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+V +DD+ +P G LRLR G GGHNG+KS +++ G +EF R+R+GI RP M
Sbjct: 107 FIVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKNGMKVVD 165
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F + ++ ++++ + + L+K + FN+
Sbjct: 166 YVLGRFTSEEISGVNQSIEKAADACEEWLNKPFLQIMNTFNS 207
>gi|399046082|ref|ZP_10738619.1| peptidyl-tRNA hydrolase [Brevibacillus sp. CF112]
gi|398055867|gb|EJL47917.1| peptidyl-tRNA hydrolase [Brevibacillus sp. CF112]
Length = 191
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 94/165 (56%), Gaps = 1/165 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID ++ GI + +A G+G V VLL KPQTYMNLSGES + +YKL +
Sbjct: 28 IDKISDKWGIPVAQNKFRALVGEGRVEGEKVLLVKPQTYMNLSGESVAEVLKFYKLTPDE 87
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V DD+ LP G LRLR G GGHNG+KS++ + G +EF R+++GIGRP
Sbjct: 88 LVVIFDDLDLPTGQLRLREKGSAGGHNGIKSMIQHL-GTQEFKRIKVGIGRPEPGRSVSD 146
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 166
++LQ F A R +I A+ + + + + HFN++QK
Sbjct: 147 YVLQSFPAAERPQIQEAVGHAADAAAMWTREPFIKVMNHFNSLQK 191
>gi|365164150|ref|ZP_09360235.1| peptidyl-tRNA hydrolase [Bacillus sp. 7_6_55CFAA_CT2]
gi|423410723|ref|ZP_17387843.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG3O-2]
gi|423433493|ref|ZP_17410497.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG4O-1]
gi|363613165|gb|EHL64687.1| peptidyl-tRNA hydrolase [Bacillus sp. 7_6_55CFAA_CT2]
gi|401109954|gb|EJQ17871.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG3O-2]
gi|401111556|gb|EJQ19445.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG4O-1]
Length = 207
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 94/162 (58%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ +
Sbjct: 47 IDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVED 106
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+V +DD+ +P G LRLR G GGHNG+KS +++ G +EF R+R+GI RP M
Sbjct: 107 FVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKNGMKVVD 165
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F + ++ ++++ + + L+K + FN+
Sbjct: 166 YVLGRFTSEEIADVNHSIEKAADACEEWLNKPFLQIMNTFNS 207
>gi|229159225|ref|ZP_04287250.1| Peptidyl-tRNA hydrolase [Bacillus cereus R309803]
gi|228624240|gb|EEK81041.1| Peptidyl-tRNA hydrolase [Bacillus cereus R309803]
Length = 186
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 93/162 (57%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ +
Sbjct: 26 IDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+V +DD+ +P G LRLR G GGHNG+KS +++ G +EF R+R+GI RP M
Sbjct: 86 FVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKNGMKVVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F + ++ ++++ + + L K + FN+
Sbjct: 145 YVLARFTSEEIPDVNHSIEKAADACEEWLKKPFLQIMNTFNS 186
>gi|433543189|ref|ZP_20499601.1| peptidyl-tRNA hydrolase [Brevibacillus agri BAB-2500]
gi|432185548|gb|ELK43037.1| peptidyl-tRNA hydrolase [Brevibacillus agri BAB-2500]
Length = 189
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 94/165 (56%), Gaps = 1/165 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID ++ GI + +A G+G V VLL KPQTYMNLSGES + +YKL +
Sbjct: 26 IDKISDKWGIPVAQNKFRALVGEGRVEGEKVLLVKPQTYMNLSGESVAEVLKFYKLTPDE 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V DD+ LP G LRLR G GGHNG+KS++ + G +EF R+++GIGRP
Sbjct: 86 LVVIFDDLDLPTGQLRLREKGSAGGHNGIKSMIQHL-GTQEFKRIKVGIGRPEPGRSVSD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 166
++LQ F A R +I A+ + + + + HFN++QK
Sbjct: 145 YVLQSFPAAERPQIQEAVGHAADAAAMWTREPFIKVMNHFNSLQK 189
>gi|423520644|ref|ZP_17497117.1| peptidyl-tRNA hydrolase [Bacillus cereus HuA4-10]
gi|401180540|gb|EJQ87698.1| peptidyl-tRNA hydrolase [Bacillus cereus HuA4-10]
Length = 186
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 93/162 (57%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ +
Sbjct: 26 IDELAKRWSISLNEQKFKGVFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+V +DD+ +P G LRLR G GGHNG+KS +++ G +EF R+R+GI RP M
Sbjct: 86 FIVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKNGMKVVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F + ++ +++ + + L+K + FN+
Sbjct: 145 YVLGRFTSEEISGVNQSIENAADACEEWLNKPFLQIMNTFNS 186
>gi|301051787|ref|YP_003789998.1| peptidyl-tRNA hydrolase [Bacillus cereus biovar anthracis str. CI]
gi|300373956|gb|ADK02860.1| peptidyl-tRNA hydrolase [Bacillus cereus biovar anthracis str. CI]
Length = 207
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 94/162 (58%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ +
Sbjct: 47 IDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVED 106
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+V +DD+ +P G LRLR G GGHNG+KS +++ G +EF R+R+GI RP M
Sbjct: 107 FVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKNGMKVVD 165
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F + ++ ++++ + + L+K + FN+
Sbjct: 166 YVLGRFTSKEIPDVNHSIEKAADACEEWLNKPFLQIMNTFNS 207
>gi|218895187|ref|YP_002443598.1| peptidyl-tRNA hydrolase [Bacillus cereus G9842]
gi|228963151|ref|ZP_04124321.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|423364614|ref|ZP_17342083.1| peptidyl-tRNA hydrolase [Bacillus cereus VD022]
gi|423565591|ref|ZP_17541866.1| peptidyl-tRNA hydrolase [Bacillus cereus MSX-A1]
gi|218543107|gb|ACK95501.1| peptidyl-tRNA hydrolase [Bacillus cereus G9842]
gi|228796536|gb|EEM43974.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|401072726|gb|EJP81188.1| peptidyl-tRNA hydrolase [Bacillus cereus VD022]
gi|401193668|gb|EJR00672.1| peptidyl-tRNA hydrolase [Bacillus cereus MSX-A1]
Length = 207
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 95/162 (58%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ +
Sbjct: 47 IDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVED 106
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+V +DD+ +P G LRLR G GGHNG+KS++++ G +EF R+R+GI RP M
Sbjct: 107 FVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSMISHL-GTQEFQRIRMGIDRPKNGMKVVD 165
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F + ++ ++++ + + L+K + FN+
Sbjct: 166 YVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQIMNTFNS 207
>gi|160939695|ref|ZP_02087043.1| hypothetical protein CLOBOL_04587 [Clostridium bolteae ATCC
BAA-613]
gi|158437486|gb|EDP15250.1| hypothetical protein CLOBOL_04587 [Clostridium bolteae ATCC
BAA-613]
Length = 230
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 99/162 (61%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ G ++ K +G+G +G VLL KPQT+MNLSGES A +YK+
Sbjct: 66 VIDVLADRLGTTVEEKKFKGCYGRGIIGGQKVLLLKPQTFMNLSGESVRAAADFYKVDPE 125
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+++ +DD+ L G LR+R G GGHNG+K+++++ G +EF R+++G+G P +MD
Sbjct: 126 HIIIVYDDISLDVGQLRIRKKGSAGGHNGIKNIISHL-GTQEFPRIKVGVGDKPKKMDLA 184
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F+ R ++ A +E +++++++G + FN
Sbjct: 185 DYVLSRFSKEDRAVMEDAFREAAGAVEMMITQGADAAMNQFN 226
>gi|423618766|ref|ZP_17594599.1| peptidyl-tRNA hydrolase [Bacillus cereus VD115]
gi|401252608|gb|EJR58864.1| peptidyl-tRNA hydrolase [Bacillus cereus VD115]
Length = 207
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 95/162 (58%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ ++
Sbjct: 47 IDELAKRWSISLNEQKFKGVFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVDD 106
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+V +DD+ +P G LRLR G GGHNG+KS +++ G +EF R+R+GI RP M
Sbjct: 107 FVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKNGMKVVD 165
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F + ++ ++++ + + L+K + FN+
Sbjct: 166 YVLGRFTSEEIPDVNHSIEKAADACEGWLNKPFLQIMNTFNS 207
>gi|296271107|ref|YP_003653739.1| peptidyl-tRNA hydrolase [Thermobispora bispora DSM 43833]
gi|296093894|gb|ADG89846.1| peptidyl-tRNA hydrolase [Thermobispora bispora DSM 43833]
Length = 209
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 15 TVH-CKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPC 73
TVH +A +G + PV+LAKP +YMNLSG LA YYK+ ++V HD++ +P
Sbjct: 51 TVHKTRAQVAEGRLSGVPVVLAKPLSYMNLSGGPVKALADYYKIGPENIVVIHDELDIPF 110
Query: 74 GVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARE 133
G LR + GG GHNGLKS+ G R+++R+R GIGRPPG+MDP ++L+ F R+
Sbjct: 111 GALRAKTGGGDNGHNGLKSITKAL-GTRDYSRIRFGIGRPPGRMDPATYVLRDFATAERK 169
Query: 134 RIDTALQEGVEVLKLLLSKGLTESARHFNTIQKY 167
+ + ++++ LL++GL + F+ Y
Sbjct: 170 DLPFLIDRAADMVESLLTEGLAATQNKFHGSDLY 203
>gi|206977947|ref|ZP_03238834.1| peptidyl-tRNA hydrolase [Bacillus cereus H3081.97]
gi|217957627|ref|YP_002336169.1| peptidyl-tRNA hydrolase [Bacillus cereus AH187]
gi|218901253|ref|YP_002449087.1| peptidyl-tRNA hydrolase [Bacillus cereus AH820]
gi|228912791|ref|ZP_04076439.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228925305|ref|ZP_04088402.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228931554|ref|ZP_04094461.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228983307|ref|ZP_04143521.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229119714|ref|ZP_04248976.1| Peptidyl-tRNA hydrolase [Bacillus cereus 95/8201]
gi|229153830|ref|ZP_04281961.1| Peptidyl-tRNA hydrolase [Bacillus cereus ATCC 4342]
gi|229194442|ref|ZP_04321246.1| Peptidyl-tRNA hydrolase [Bacillus cereus m1293]
gi|384177957|ref|YP_005563719.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|423357805|ref|ZP_17335397.1| peptidyl-tRNA hydrolase [Bacillus cereus IS075]
gi|423554015|ref|ZP_17530341.1| peptidyl-tRNA hydrolase [Bacillus cereus ISP3191]
gi|423572002|ref|ZP_17548218.1| peptidyl-tRNA hydrolase [Bacillus cereus MSX-A12]
gi|423572806|ref|ZP_17548925.1| peptidyl-tRNA hydrolase [Bacillus cereus MSX-D12]
gi|423608124|ref|ZP_17584016.1| peptidyl-tRNA hydrolase [Bacillus cereus VD102]
gi|206743853|gb|EDZ55273.1| peptidyl-tRNA hydrolase [Bacillus cereus H3081.97]
gi|217064082|gb|ACJ78332.1| peptidyl-tRNA hydrolase [Bacillus cereus AH187]
gi|218535325|gb|ACK87723.1| peptidyl-tRNA hydrolase [Bacillus cereus AH820]
gi|228589032|gb|EEK47046.1| Peptidyl-tRNA hydrolase [Bacillus cereus m1293]
gi|228629634|gb|EEK86330.1| Peptidyl-tRNA hydrolase [Bacillus cereus ATCC 4342]
gi|228663739|gb|EEL19317.1| Peptidyl-tRNA hydrolase [Bacillus cereus 95/8201]
gi|228776421|gb|EEM24773.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228828106|gb|EEM73833.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228834352|gb|EEM79892.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228846851|gb|EEM91855.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|324324041|gb|ADY19301.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|401073986|gb|EJP82394.1| peptidyl-tRNA hydrolase [Bacillus cereus IS075]
gi|401182096|gb|EJQ89238.1| peptidyl-tRNA hydrolase [Bacillus cereus ISP3191]
gi|401199136|gb|EJR06046.1| peptidyl-tRNA hydrolase [Bacillus cereus MSX-A12]
gi|401216730|gb|EJR23436.1| peptidyl-tRNA hydrolase [Bacillus cereus MSX-D12]
gi|401238621|gb|EJR45057.1| peptidyl-tRNA hydrolase [Bacillus cereus VD102]
Length = 207
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 94/162 (58%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ +
Sbjct: 47 IDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVED 106
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+V +DD+ +P G LRLR G GGHNG+KS +++ G +EF R+R+GI RP M
Sbjct: 107 FVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKNGMKVVD 165
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F + ++ ++++ + + L+K + FN+
Sbjct: 166 YVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQIMNTFNS 207
>gi|423513015|ref|ZP_17489545.1| peptidyl-tRNA hydrolase [Bacillus cereus HuA2-1]
gi|402446363|gb|EJV78223.1| peptidyl-tRNA hydrolase [Bacillus cereus HuA2-1]
Length = 207
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 93/162 (57%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ +
Sbjct: 47 IDELAKRWSISLNEQKFKGVFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVED 106
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+V +DD+ +P G LRLR G GGHNG+KS +++ G +EF R+R+GI RP +
Sbjct: 107 FIVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKNGIKVVD 165
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F A ++ +++ + + L+K + FN+
Sbjct: 166 YVLGRFTAEEISGVNQSIENAADACEEWLNKPFLQIMNTFNS 207
>gi|30018322|ref|NP_829953.1| peptidyl-tRNA hydrolase [Bacillus cereus ATCC 14579]
gi|75759613|ref|ZP_00739699.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|29893862|gb|AAP07154.1| Peptidyl-tRNA hydrolase [Bacillus cereus ATCC 14579]
gi|74492904|gb|EAO56034.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar israelensis
ATCC 35646]
Length = 210
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 94/162 (58%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ +
Sbjct: 50 IDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVED 109
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+V +DD+ +P G LRLR G GGHNG+KS +++ G +EF R+R+GI RP M
Sbjct: 110 FVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKNGMKVVD 168
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F + ++ ++++ + + L+K + FN+
Sbjct: 169 YVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQIMNTFNS 210
>gi|228937354|ref|ZP_04100001.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228970240|ref|ZP_04130900.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228976810|ref|ZP_04137223.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis Bt407]
gi|384184134|ref|YP_005570030.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|410672423|ref|YP_006924794.1| peptidyl-tRNA hydrolase Pth [Bacillus thuringiensis Bt407]
gi|423387016|ref|ZP_17364271.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG1X1-2]
gi|423526650|ref|ZP_17503095.1| peptidyl-tRNA hydrolase [Bacillus cereus HuB1-1]
gi|452196427|ref|YP_007476508.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|228782906|gb|EEM31071.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis Bt407]
gi|228789475|gb|EEM37394.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228822312|gb|EEM68293.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|326937843|gb|AEA13739.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|401630270|gb|EJS48076.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG1X1-2]
gi|402455143|gb|EJV86927.1| peptidyl-tRNA hydrolase [Bacillus cereus HuB1-1]
gi|409171552|gb|AFV15857.1| peptidyl-tRNA hydrolase Pth [Bacillus thuringiensis Bt407]
gi|452101820|gb|AGF98759.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 207
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 94/162 (58%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ +
Sbjct: 47 IDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVED 106
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+V +DD+ +P G LRLR G GGHNG+KS +++ G +EF R+R+GI RP M
Sbjct: 107 FVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKNGMKVVD 165
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F + ++ ++++ + + L+K + FN+
Sbjct: 166 YVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQIMNTFNS 207
>gi|423399540|ref|ZP_17376736.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG2X1-1]
gi|423410232|ref|ZP_17387379.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG2X1-3]
gi|401643596|gb|EJS61292.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG2X1-1]
gi|401649041|gb|EJS66631.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG2X1-3]
Length = 207
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 94/162 (58%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ +
Sbjct: 47 IDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVED 106
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+V +DD+ +P G LRLR G GGHNG+KS +++ G +EF R+R+GI RP M
Sbjct: 107 FVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKNGMKVVD 165
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F + ++ ++++ + + L+K + FN+
Sbjct: 166 YVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQIMNTFNS 207
>gi|218232965|ref|YP_002364901.1| peptidyl-tRNA hydrolase [Bacillus cereus B4264]
gi|228898805|ref|ZP_04063088.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis IBL 4222]
gi|228905848|ref|ZP_04069746.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis IBL 200]
gi|228919002|ref|ZP_04082382.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228950600|ref|ZP_04112735.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|229039957|ref|ZP_04189721.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH676]
gi|229067816|ref|ZP_04201134.1| Peptidyl-tRNA hydrolase [Bacillus cereus F65185]
gi|229077330|ref|ZP_04210007.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock4-2]
gi|229107738|ref|ZP_04237375.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock1-15]
gi|229125569|ref|ZP_04254602.1| Peptidyl-tRNA hydrolase [Bacillus cereus BDRD-Cer4]
gi|229142857|ref|ZP_04271300.1| Peptidyl-tRNA hydrolase [Bacillus cereus BDRD-ST24]
gi|229148461|ref|ZP_04276718.1| Peptidyl-tRNA hydrolase [Bacillus cereus m1550]
gi|229176652|ref|ZP_04304057.1| Peptidyl-tRNA hydrolase [Bacillus cereus 172560W]
gi|229188337|ref|ZP_04315386.1| Peptidyl-tRNA hydrolase [Bacillus cereus ATCC 10876]
gi|296500884|ref|YP_003662584.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis BMB171]
gi|423427604|ref|ZP_17404635.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG3X2-2]
gi|423506593|ref|ZP_17483182.1| peptidyl-tRNA hydrolase [Bacillus cereus HD73]
gi|423583701|ref|ZP_17559812.1| peptidyl-tRNA hydrolase [Bacillus cereus VD014]
gi|423589350|ref|ZP_17565436.1| peptidyl-tRNA hydrolase [Bacillus cereus VD045]
gi|423633618|ref|ZP_17609271.1| peptidyl-tRNA hydrolase [Bacillus cereus VD156]
gi|423644688|ref|ZP_17620305.1| peptidyl-tRNA hydrolase [Bacillus cereus VD166]
gi|423658446|ref|ZP_17633745.1| peptidyl-tRNA hydrolase [Bacillus cereus VD200]
gi|449086717|ref|YP_007419158.1| SpoVC [Bacillus thuringiensis serovar kurstaki str. HD73]
gi|218160922|gb|ACK60914.1| aminoacyl-tRNA hydrolase [Bacillus cereus B4264]
gi|228595136|gb|EEK52906.1| Peptidyl-tRNA hydrolase [Bacillus cereus ATCC 10876]
gi|228606819|gb|EEK64235.1| Peptidyl-tRNA hydrolase [Bacillus cereus 172560W]
gi|228635003|gb|EEK91575.1| Peptidyl-tRNA hydrolase [Bacillus cereus m1550]
gi|228640620|gb|EEK97007.1| Peptidyl-tRNA hydrolase [Bacillus cereus BDRD-ST24]
gi|228657886|gb|EEL13691.1| Peptidyl-tRNA hydrolase [Bacillus cereus BDRD-Cer4]
gi|228675711|gb|EEL30918.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock1-15]
gi|228705986|gb|EEL58297.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock4-2]
gi|228715300|gb|EEL67158.1| Peptidyl-tRNA hydrolase [Bacillus cereus F65185]
gi|228727365|gb|EEL78558.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH676]
gi|228809075|gb|EEM55559.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228840651|gb|EEM85912.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228853788|gb|EEM98547.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis IBL 200]
gi|228860830|gb|EEN05207.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis IBL 4222]
gi|296321936|gb|ADH04864.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis BMB171]
gi|401107999|gb|EJQ15935.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG3X2-2]
gi|401208333|gb|EJR15100.1| peptidyl-tRNA hydrolase [Bacillus cereus VD014]
gi|401224003|gb|EJR30563.1| peptidyl-tRNA hydrolase [Bacillus cereus VD045]
gi|401269472|gb|EJR75502.1| peptidyl-tRNA hydrolase [Bacillus cereus VD166]
gi|401283328|gb|EJR89223.1| peptidyl-tRNA hydrolase [Bacillus cereus VD156]
gi|401287779|gb|EJR93550.1| peptidyl-tRNA hydrolase [Bacillus cereus VD200]
gi|402447418|gb|EJV79270.1| peptidyl-tRNA hydrolase [Bacillus cereus HD73]
gi|449020474|gb|AGE75637.1| SpoVC [Bacillus thuringiensis serovar kurstaki str. HD73]
Length = 207
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 94/162 (58%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ +
Sbjct: 47 IDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVED 106
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+V +DD+ +P G LRLR G GGHNG+KS +++ G +EF R+R+GI RP M
Sbjct: 107 FVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKNGMKVVD 165
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F + ++ ++++ + + L+K + FN+
Sbjct: 166 YVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQIMNTFNS 207
>gi|228989259|ref|ZP_04149252.1| Peptidyl-tRNA hydrolase [Bacillus pseudomycoides DSM 12442]
gi|229003057|ref|ZP_04160914.1| Peptidyl-tRNA hydrolase [Bacillus mycoides Rock1-4]
gi|228758215|gb|EEM07403.1| Peptidyl-tRNA hydrolase [Bacillus mycoides Rock1-4]
gi|228770469|gb|EEM19040.1| Peptidyl-tRNA hydrolase [Bacillus pseudomycoides DSM 12442]
Length = 186
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 93/161 (57%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ GIS++ K +G GFV V+L KP TYMNLSGES PL YYK+ +
Sbjct: 26 IDELAKRWGISLSEQKFKGMYGSGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+V +DD+ +P G LRLR G GGHNG+KS +++ G +EF R+R+GI RP M
Sbjct: 86 FVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKNGMKVVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F A ++ ++++ + + L K + FN
Sbjct: 145 YVLGRFTAEELPEVNQSIEKAADACEEWLKKPFLQIMNTFN 185
>gi|423438932|ref|ZP_17415913.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG4X12-1]
gi|401115420|gb|EJQ23272.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG4X12-1]
Length = 207
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 94/162 (58%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ +
Sbjct: 47 IDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVED 106
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+V +DD+ +P G LRLR G GGHNG+KS +++ G +EF R+R+GI RP M
Sbjct: 107 FVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKNGMKVVD 165
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F + ++ ++++ + + L+K + FN+
Sbjct: 166 YVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQIMNTFNS 207
>gi|402562857|ref|YP_006605581.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis HD-771]
gi|401791509|gb|AFQ17548.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis HD-771]
Length = 186
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 95/162 (58%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ +
Sbjct: 26 IDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+V +DD+ +P G LRLR G GGHNG+KS++++ G +EF R+R+GI RP M
Sbjct: 86 FVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSMISHL-GTQEFQRIRMGIDRPKNGMKVVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F + ++ ++++ + + L+K + FN+
Sbjct: 145 YVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQIMNTFNS 186
>gi|266619806|ref|ZP_06112741.1| aminoacyl-tRNA hydrolase [Clostridium hathewayi DSM 13479]
gi|288868592|gb|EFD00891.1| aminoacyl-tRNA hydrolase [Clostridium hathewayi DSM 13479]
Length = 192
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 99/165 (60%), Gaps = 1/165 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ G ++ KA +G+G++G V+LAKPQTYMNLSGES +A +YK+
Sbjct: 26 IDILADKAGTTVTEKKHKALYGKGYIGGQKVILAKPQTYMNLSGESIREIADFYKIEPEN 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+++ DD+ L G LR+R G GGHNGLK+++++ G +EF R+RIG+G P MD
Sbjct: 86 IIILCDDINLSEGQLRIRLKGSAGGHNGLKNIISHL-GTQEFPRIRIGVGEKPRGMDLAD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 166
++L +F + ++ A ++ + +++ +G + H+N K
Sbjct: 145 YVLGRFPKEQQAVMEEAYRDAADAACMMIEEGADAAMNHYNRKHK 189
>gi|296329555|ref|ZP_06872041.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305672752|ref|YP_003864423.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296153298|gb|EFG94161.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305410995|gb|ADM36113.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 188
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 88/162 (54%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ I +N +G GFV VLL KP TYMNLSGE PL YY +
Sbjct: 25 VIDQLAKEWNIELNQNKFNGLYGTGFVSGKKVLLVKPLTYMNLSGECLRPLMDYYDVDNG 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+ V +DD+ LP G +RLR G GGHNG+KS++ + G EF R+RIGIGRP M
Sbjct: 85 DLTVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQHL-GTSEFDRIRIGIGRPVNGMKVV 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L FN ID A+ + V+ + LSK E FN
Sbjct: 144 DYVLGSFNKEEVPDIDGAIDKSVKACEASLSKPFLEVMNEFN 185
>gi|355678112|ref|ZP_09060791.1| peptidyl-tRNA hydrolase [Clostridium citroniae WAL-17108]
gi|354812558|gb|EHE97173.1| peptidyl-tRNA hydrolase [Clostridium citroniae WAL-17108]
Length = 216
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 99/162 (61%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ G ++ K +G+G +G VLL KPQT+MNLSGES A +YK+
Sbjct: 52 VIDVLADMLGTTVEEKKFKGLYGRGIIGGEKVLLLKPQTFMNLSGESVKAAADFYKVDHE 111
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+++ +DD+ L G LR+R G GGHNG+K+++ + G +EF+R+R+G+G P +MD
Sbjct: 112 HIIIIYDDISLDVGQLRIRKKGSAGGHNGIKNIIAHL-GTQEFSRIRVGVGDKPKKMDLA 170
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F+ R ++ A ++ + + +++++ + + FN
Sbjct: 171 DYVLSRFSKEDRVLMEDAFKDASKAVNVMITESVDAAMNQFN 212
>gi|433460548|ref|ZP_20418177.1| peptidyl-tRNA hydrolase [Halobacillus sp. BAB-2008]
gi|432191390|gb|ELK48348.1| peptidyl-tRNA hydrolase [Halobacillus sp. BAB-2008]
Length = 187
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 92/163 (56%), Gaps = 1/163 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D AE G ++ F V V+L KPQTYMNLSGES PL YY + +
Sbjct: 25 IVDQLAEKNGWTLTQKKFNGLFTMERVDGEKVVLLKPQTYMNLSGESLRPLMEYYDMDVE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
VLV +DD+ LP G +RLR GGHGGHNG++++++ G +EF RLR+G+GRP G
Sbjct: 85 DVLVVYDDLDLPPGKIRLRQKGGHGGHNGIRNIIDQL-GTKEFKRLRVGVGRPNGSQTVI 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
+L F + ++ ++++ V+ + L++ E +N
Sbjct: 144 DHVLGDFYKEEWKAVEESIEQSVQACEAWLNQPFNEVMNDYNV 186
>gi|402299310|ref|ZP_10818932.1| peptidyl-tRNA hydrolase [Bacillus alcalophilus ATCC 27647]
gi|401725514|gb|EJS98792.1| peptidyl-tRNA hydrolase [Bacillus alcalophilus ATCC 27647]
Length = 185
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 95/162 (58%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID+ A++ GI +N K +G G V V L KP TYMNLSGES PL Y+++PL
Sbjct: 25 IIDSCAKTLGIELNQAKFKGIYGTGIVNGEKVYLLKPLTYMNLSGESVRPLMDYFQIPLE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ LP G +RLR G GGHNG+KS++ + G +EF R+R+G+ RP
Sbjct: 85 DLVVIYDDLDLPAGKIRLRKKGSAGGHNGIKSLIQHL-GTQEFNRIRVGVDRPKNGEPIV 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L K++ R+ I+ ++++ ++ S E FN
Sbjct: 144 HYVLGKYHPDERQAINESIEQATGAVEAWTSASFLEVMNKFN 185
>gi|118475822|ref|YP_892973.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis str. Al Hakam]
gi|254682322|ref|ZP_05146183.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. CNEVA-9066]
gi|254735453|ref|ZP_05193161.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. Western North
America USA6153]
gi|254744645|ref|ZP_05202324.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. Kruger B]
gi|254756350|ref|ZP_05208379.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. Vollum]
gi|254762406|ref|ZP_05214248.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. Australia 94]
gi|118415047|gb|ABK83466.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis str. Al Hakam]
Length = 210
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 94/162 (58%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ +
Sbjct: 50 IDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVED 109
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+V +DD+ +P G LRLR G GGHNG+KS +++ G +EF R+R+GI RP M
Sbjct: 110 FVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKNGMKVVD 168
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F + ++ ++++ + + L+K + FN+
Sbjct: 169 YVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQIMNTFNS 210
>gi|47569900|ref|ZP_00240567.1| peptidyl-tRNA hydrolase [Bacillus cereus G9241]
gi|52145164|ref|YP_081663.1| peptidyl-tRNA hydrolase [Bacillus cereus E33L]
gi|222093821|ref|YP_002527870.1| peptidyl-tRNA hydrolase [Bacillus cereus Q1]
gi|375282148|ref|YP_005102581.1| peptidyl-tRNA hydrolase [Bacillus cereus NC7401]
gi|402554362|ref|YP_006595633.1| peptidyl-tRNA hydrolase [Bacillus cereus FRI-35]
gi|68052912|sp|Q63HI2.1|PTH_BACCZ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783851|sp|B9IZD4.1|PTH_BACCQ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|47553434|gb|EAL11818.1| peptidyl-tRNA hydrolase [Bacillus cereus G9241]
gi|51978633|gb|AAU20183.1| aminoacyl-tRNA hydrolase (peptidyl-tRNA hydrolase);stage V
sporulation protein C [Bacillus cereus E33L]
gi|221237868|gb|ACM10578.1| aminoacyl-tRNA hydrolase (peptidyl-tRNA hydrolase);stage V
sporulation protein C [Bacillus cereus Q1]
gi|358350669|dbj|BAL15841.1| peptidyl-tRNA hydrolase [Bacillus cereus NC7401]
gi|401795572|gb|AFQ09431.1| peptidyl-tRNA hydrolase [Bacillus cereus FRI-35]
Length = 186
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 94/162 (58%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ +
Sbjct: 26 IDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+V +DD+ +P G LRLR G GGHNG+KS +++ G +EF R+R+GI RP M
Sbjct: 86 FVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKNGMKVVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F + ++ ++++ + + L+K + FN+
Sbjct: 145 YVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQIMNTFNS 186
>gi|65317511|ref|ZP_00390470.1| COG0193: Peptidyl-tRNA hydrolase [Bacillus anthracis str. A2012]
gi|165872550|ref|ZP_02217182.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0488]
gi|167635053|ref|ZP_02393370.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0442]
gi|167641506|ref|ZP_02399754.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0193]
gi|170688886|ref|ZP_02880088.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0465]
gi|170707529|ref|ZP_02897982.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0389]
gi|177655322|ref|ZP_02936851.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0174]
gi|190568956|ref|ZP_03021857.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. Tsiankovskii-I]
gi|196036361|ref|ZP_03103758.1| peptidyl-tRNA hydrolase [Bacillus cereus W]
gi|196041774|ref|ZP_03109064.1| aminoacyl-tRNA hydrolase [Bacillus cereus NVH0597-99]
gi|196047390|ref|ZP_03114603.1| peptidyl-tRNA hydrolase [Bacillus cereus 03BB108]
gi|225862104|ref|YP_002747482.1| peptidyl-tRNA hydrolase [Bacillus cereus 03BB102]
gi|227812725|ref|YP_002812734.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. CDC 684]
gi|228943858|ref|ZP_04106244.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|229089183|ref|ZP_04220465.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock3-42]
gi|229182446|ref|ZP_04309698.1| Peptidyl-tRNA hydrolase [Bacillus cereus BGSC 6E1]
gi|229602955|ref|YP_002864703.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0248]
gi|254724192|ref|ZP_05185977.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A1055]
gi|300119146|ref|ZP_07056847.1| peptidyl-tRNA hydrolase [Bacillus cereus SJ1]
gi|376264079|ref|YP_005116791.1| Peptidyl-tRNA hydrolase [Bacillus cereus F837/76]
gi|386733919|ref|YP_006207100.1| Peptidyl-tRNA hydrolase [Bacillus anthracis str. H9401]
gi|164711678|gb|EDR17223.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0488]
gi|167510491|gb|EDR85889.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0193]
gi|167529527|gb|EDR92277.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0442]
gi|170127525|gb|EDS96399.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0389]
gi|170667110|gb|EDT17871.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0465]
gi|172080163|gb|EDT65256.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0174]
gi|190559880|gb|EDV13864.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. Tsiankovskii-I]
gi|195990991|gb|EDX54962.1| peptidyl-tRNA hydrolase [Bacillus cereus W]
gi|196021792|gb|EDX60486.1| peptidyl-tRNA hydrolase [Bacillus cereus 03BB108]
gi|196027394|gb|EDX66011.1| aminoacyl-tRNA hydrolase [Bacillus cereus NVH0597-99]
gi|225790416|gb|ACO30633.1| aminoacyl-tRNA hydrolase [Bacillus cereus 03BB102]
gi|227002837|gb|ACP12580.1| aminoacyl-tRNA hydrolase [Bacillus anthracis str. CDC 684]
gi|228601026|gb|EEK58594.1| Peptidyl-tRNA hydrolase [Bacillus cereus BGSC 6E1]
gi|228694146|gb|EEL47827.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock3-42]
gi|228815815|gb|EEM62050.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|229267363|gb|ACQ49000.1| aminoacyl-tRNA hydrolase [Bacillus anthracis str. A0248]
gi|298723468|gb|EFI64209.1| peptidyl-tRNA hydrolase [Bacillus cereus SJ1]
gi|364509879|gb|AEW53278.1| Peptidyl-tRNA hydrolase [Bacillus cereus F837/76]
gi|384383771|gb|AFH81432.1| Peptidyl-tRNA hydrolase [Bacillus anthracis str. H9401]
Length = 207
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 94/162 (58%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ +
Sbjct: 47 IDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVED 106
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+V +DD+ +P G LRLR G GGHNG+KS +++ G +EF R+R+GI RP M
Sbjct: 107 FVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKNGMKVVD 165
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F + ++ ++++ + + L+K + FN+
Sbjct: 166 YVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQIMNTFNS 207
>gi|434378694|ref|YP_006613338.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis HD-789]
gi|38372414|sp|Q81J96.2|PTH_BACCR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|401877251|gb|AFQ29418.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis HD-789]
Length = 186
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 94/162 (58%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ +
Sbjct: 26 IDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+V +DD+ +P G LRLR G GGHNG+KS +++ G +EF R+R+GI RP M
Sbjct: 86 FVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKNGMKVVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F + ++ ++++ + + L+K + FN+
Sbjct: 145 YVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQIMNTFNS 186
>gi|423597225|ref|ZP_17573225.1| peptidyl-tRNA hydrolase [Bacillus cereus VD078]
gi|401239566|gb|EJR45991.1| peptidyl-tRNA hydrolase [Bacillus cereus VD078]
Length = 207
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 93/162 (57%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ +
Sbjct: 47 IDELAKRWSISLNEQKFKGVFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVED 106
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+V +DD+ +P G LRLR G GGHNG+KS +++ G +EF R+R+GI RP +
Sbjct: 107 FIVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKNGIKVVD 165
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F + ++ +++ + + L+K + FN+
Sbjct: 166 YVLGRFTSEEISGVNQSIENAADACEEWLNKPFIQIMNTFNS 207
>gi|239629011|ref|ZP_04672042.1| aminoacyl-tRNA hydrolase [Clostridiales bacterium 1_7_47_FAA]
gi|239519157|gb|EEQ59023.1| aminoacyl-tRNA hydrolase [Clostridiales bacterium 1_7_47FAA]
Length = 216
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 98/162 (60%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ G ++ K +G+G +G VLL KPQT+MNLSGES A +YK+
Sbjct: 52 VIDVLADMLGTTVEEKKFKGCYGRGIIGGEKVLLLKPQTFMNLSGESIRAAADFYKVDPE 111
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+++ +DD+ L G LR+R G GGHNG+K+++ + G +EF R+++G+G P +MD
Sbjct: 112 HIIIIYDDISLDVGQLRIRKKGSAGGHNGIKNIIAHL-GTQEFPRIKVGVGDKPKKMDLA 170
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F+ R ++ A + + ++++++ G+ + FN
Sbjct: 171 DYVLSRFSKEDRAAMEDAFKTAAKAVEVMITDGMDTAMNQFN 212
>gi|228995442|ref|ZP_04155112.1| Peptidyl-tRNA hydrolase [Bacillus mycoides Rock3-17]
gi|228764303|gb|EEM13180.1| Peptidyl-tRNA hydrolase [Bacillus mycoides Rock3-17]
Length = 186
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 93/161 (57%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ GIS++ K +G GFV V+L KP TYMNLSGES PL YYK+ +
Sbjct: 26 IDELAKRWGISLSEQKFKGMYGSGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIGVED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+V +DD+ +P G LRLR G GGHNG+KS +++ G +EF R+R+GI RP M
Sbjct: 86 FVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKNGMKVVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F A ++ ++++ + + L K + FN
Sbjct: 145 YVLGRFTAEELPEVNQSIEKAADACEEWLKKPFLQIMNTFN 185
>gi|229170902|ref|ZP_04298505.1| Peptidyl-tRNA hydrolase [Bacillus cereus MM3]
gi|423399629|ref|ZP_17376802.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG2X1-2]
gi|423461686|ref|ZP_17438482.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG5X2-1]
gi|423480173|ref|ZP_17456885.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG6X1-1]
gi|228612568|gb|EEK69787.1| Peptidyl-tRNA hydrolase [Bacillus cereus MM3]
gi|401135348|gb|EJQ42947.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG5X2-1]
gi|401658235|gb|EJS75732.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG2X1-2]
gi|402423676|gb|EJV55882.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG6X1-1]
Length = 207
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 93/162 (57%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ +
Sbjct: 47 IDELAKRWNISLNEQKFKGIFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVED 106
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+V +DD+ +P G LRLR G GGHNG+KS +++ G +EF R+R+GI RP M
Sbjct: 107 FVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKNGMKVVD 165
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F + + ++++ + + L+K + FN+
Sbjct: 166 YVLGRFTSEEIPDVSHSIEKAADACEEWLNKPFLQIMNTFNS 207
>gi|452972534|gb|EME72364.1| peptidyl-tRNA hydrolase [Bacillus sonorensis L12]
Length = 188
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 90/161 (55%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID ++ I+++ +G GFV VLL KP TYMNLSGE PL YY++P+
Sbjct: 26 IDELSKEWNIALDKTKFNGQYGIGFVSGRKVLLVKPLTYMNLSGECLRPLLDYYEIPIEN 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+ V +DD+ LP G +RLR G GGHNG+KS++ + G +F R+RIGIGRP M
Sbjct: 86 LKVIYDDLDLPAGKIRLRVKGSAGGHNGIKSMIQHL-GTSDFHRIRIGIGRPVNGMKIVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F A I A+Q+ V+ + L K E FN
Sbjct: 145 YVLGAFTADEEPAIQEAVQKTVKACEASLEKPFLEVMNEFN 185
>gi|42779130|ref|NP_976377.1| peptidyl-tRNA hydrolase [Bacillus cereus ATCC 10987]
gi|42735045|gb|AAS38985.1| peptidyl-tRNA hydrolase [Bacillus cereus ATCC 10987]
Length = 210
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 94/162 (58%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ +
Sbjct: 50 IDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVED 109
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+V +DD+ +P G LRLR G GGHNG+KS +++ G +EF R+R+GI RP M
Sbjct: 110 FVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKNGMKVVD 168
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F + ++ ++++ + + L+K + FN+
Sbjct: 169 YVLGRFTSEEIPGVNHSIEKAADACEEWLNKPFLQIMNTFNS 210
>gi|423374895|ref|ZP_17352232.1| peptidyl-tRNA hydrolase [Bacillus cereus AND1407]
gi|401093377|gb|EJQ01478.1| peptidyl-tRNA hydrolase [Bacillus cereus AND1407]
Length = 207
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 93/162 (57%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ +
Sbjct: 47 IDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVED 106
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+V +DD+ +P G LRLR G GGHNG+KS +++ G +EF R+R+GI RP M
Sbjct: 107 FVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKNGMKVVD 165
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F + ++ ++++ + + L+K FN+
Sbjct: 166 YVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLHIMNTFNS 207
>gi|169825683|ref|YP_001695841.1| peptidyl-tRNA hydrolase [Lysinibacillus sphaericus C3-41]
gi|168990171|gb|ACA37711.1| Peptidyl-tRNA hydrolase [Lysinibacillus sphaericus C3-41]
Length = 203
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 93/162 (57%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+IDA AE G + + + VLL KP TYMNLSGE GPL Y+ + +
Sbjct: 42 VIDALAEKWGTPLTNSKFNGMYTTVHRPEGKVLLVKPLTYMNLSGECVGPLMDYFDIDVE 101
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ L G LRLR G GGHNG+KS++ + G +EF R+R+GI RPP M
Sbjct: 102 DLIVIYDDLDLETGKLRLRQKGSAGGHNGIKSLIQHL-GTQEFNRIRVGISRPPAGMKVA 160
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L KF+ + ++ A+++ V +++ LSK + HFN
Sbjct: 161 DYVLGKFSKEDQVSMNEAIEKSVNAVEVSLSKPFLDVMNHFN 202
>gi|30260242|ref|NP_842619.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. Ames]
gi|47525304|ref|YP_016653.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. 'Ames Ancestor']
gi|49183085|ref|YP_026337.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. Sterne]
gi|49481760|ref|YP_034404.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|421510668|ref|ZP_15957557.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. UR-1]
gi|421640741|ref|ZP_16081319.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. BF1]
gi|38372419|sp|Q81VY9.1|PTH_BACAN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|68052958|sp|Q6HPW6.1|PTH_BACHK RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|30253563|gb|AAP24105.1| aminoacyl-tRNA hydrolase [Bacillus anthracis str. Ames]
gi|47500452|gb|AAT29128.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. 'Ames Ancestor']
gi|49177012|gb|AAT52388.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. Sterne]
gi|49333316|gb|AAT63962.1| aminoacyl-tRNA hydrolase (peptidyl-tRNA hydrolase);stage V
sporulation protein C [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|401819289|gb|EJT18470.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. UR-1]
gi|403392120|gb|EJY89378.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. BF1]
Length = 186
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 94/162 (58%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ +
Sbjct: 26 IDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+V +DD+ +P G LRLR G GGHNG+KS +++ G +EF R+R+GI RP M
Sbjct: 86 FVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKNGMKVVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F + ++ ++++ + + L+K + FN+
Sbjct: 145 YVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQIMNTFNS 186
>gi|78043715|ref|YP_359068.1| peptidyl-tRNA hydrolase [Carboxydothermus hydrogenoformans Z-2901]
gi|85681884|sp|Q9F8Q3.2|PTH_CARHZ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|77995830|gb|ABB14729.1| peptidyl-tRNA hydrolase [Carboxydothermus hydrogenoformans Z-2901]
Length = 187
Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 97/162 (59%), Gaps = 2/162 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A+ GI + K+ G+G + VLL KPQTYMNLSG + ++YKLPL+
Sbjct: 25 VVDELAKKHGILITKRKFKSLVGEGEILGVKVLLLKPQTYMNLSGTAVQEAVSFYKLPLS 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
R++V +DD+ LP G +RLR G GGH G+ S+++ G+ E RL+IGIGR P D K
Sbjct: 85 RLVVVYDDLDLPLGKIRLRLKGSAGGHRGMGSIISCL-GSEEIPRLKIGIGR-PAVGDVK 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++LQ F RE ++ L+ E + + L++G ++ FN
Sbjct: 143 DYVLQPFTGAEREILEPTLKLAAEAITVALTEGFNKAMTDFN 184
>gi|229009561|ref|ZP_04166788.1| Peptidyl-tRNA hydrolase [Bacillus mycoides DSM 2048]
gi|229053898|ref|ZP_04195333.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH603]
gi|229165040|ref|ZP_04292836.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH621]
gi|423490666|ref|ZP_17467348.1| peptidyl-tRNA hydrolase [Bacillus cereus BtB2-4]
gi|423496406|ref|ZP_17473050.1| peptidyl-tRNA hydrolase [Bacillus cereus CER057]
gi|423496800|ref|ZP_17473417.1| peptidyl-tRNA hydrolase [Bacillus cereus CER074]
gi|423595306|ref|ZP_17571336.1| peptidyl-tRNA hydrolase [Bacillus cereus VD048]
gi|423659630|ref|ZP_17634799.1| peptidyl-tRNA hydrolase [Bacillus cereus VDM022]
gi|423671082|ref|ZP_17646111.1| peptidyl-tRNA hydrolase [Bacillus cereus VDM034]
gi|423672695|ref|ZP_17647634.1| peptidyl-tRNA hydrolase [Bacillus cereus VDM062]
gi|228618425|gb|EEK75454.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH621]
gi|228721439|gb|EEL72959.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH603]
gi|228751705|gb|EEM01504.1| Peptidyl-tRNA hydrolase [Bacillus mycoides DSM 2048]
gi|401149136|gb|EJQ56615.1| peptidyl-tRNA hydrolase [Bacillus cereus CER057]
gi|401163981|gb|EJQ71321.1| peptidyl-tRNA hydrolase [Bacillus cereus CER074]
gi|401222232|gb|EJR28829.1| peptidyl-tRNA hydrolase [Bacillus cereus VD048]
gi|401293913|gb|EJR99546.1| peptidyl-tRNA hydrolase [Bacillus cereus VDM034]
gi|401304649|gb|EJS10199.1| peptidyl-tRNA hydrolase [Bacillus cereus VDM022]
gi|401311427|gb|EJS16728.1| peptidyl-tRNA hydrolase [Bacillus cereus VDM062]
gi|402429011|gb|EJV61102.1| peptidyl-tRNA hydrolase [Bacillus cereus BtB2-4]
Length = 207
Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 93/162 (57%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ +
Sbjct: 47 IDELAKRWSISLNEQKFKGVFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVED 106
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+V +DD+ +P G LRLR G GGHNG+KS +++ G +EF R+R+GI RP +
Sbjct: 107 FIVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKNGIKVVD 165
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F + ++ +++ + + L+K + FN+
Sbjct: 166 YVLGRFTSEEISGVNQSIENAADACEEWLNKPFLQIMNTFNS 207
>gi|387928177|ref|ZP_10130855.1| peptidyl-tRNA hydrolase [Bacillus methanolicus PB1]
gi|387587763|gb|EIJ80085.1| peptidyl-tRNA hydrolase [Bacillus methanolicus PB1]
Length = 186
Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 91/162 (56%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID +E I ++ K +G GFV ++L KP TYMNLSGES + YY + L
Sbjct: 25 VIDKLSELLNIPLDQAKLKGNYGMGFVNGEKLILLKPLTYMNLSGESICAVMDYYDIALE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV +DD+ LP G +RLR G GGHNG+KS + + G++EF R+R+GI RPP M
Sbjct: 85 DLLVIYDDLDLPVGKIRLRQKGSAGGHNGIKSTIAHL-GSQEFNRIRVGIDRPPAGMSVV 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F +E +D ++ E + L K + +N
Sbjct: 144 DYVLGRFREDEQEIMDDVIKTCAEACEAWLQKPFLQVMNEYN 185
>gi|423388179|ref|ZP_17365405.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG1X1-3]
gi|401644369|gb|EJS62061.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG1X1-3]
Length = 186
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 94/162 (58%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ +
Sbjct: 26 IDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDIED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+V +DD+ +P G LRLR G GGHNG+KS +++ G +EF R+R+GI RP M
Sbjct: 86 FIVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKNGMKVVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F + ++ ++++ + + L+K + FN+
Sbjct: 145 YVLGRFTSEELPGVNQSIEKTADACEEWLNKPFLQIMNTFNS 186
>gi|229027898|ref|ZP_04184053.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH1271]
gi|228733412|gb|EEL84239.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH1271]
Length = 207
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 93/162 (57%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ +
Sbjct: 47 IDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVED 106
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+V +DD+ +P G LRLR G GGHNG+KS +++ G +EF R+R+GI RP M
Sbjct: 107 FVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKNGMKVVD 165
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F + + ++++ + + L+K + FN+
Sbjct: 166 YVLGRFTSEEIPDVGHSIEKAADACEEWLNKPFLQIMNTFNS 207
>gi|68052974|sp|Q73FF7.2|PTH_BACC1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
Length = 186
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 94/162 (58%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ +
Sbjct: 26 IDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+V +DD+ +P G LRLR G GGHNG+KS +++ G +EF R+R+GI RP M
Sbjct: 86 FVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKNGMKVVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F + ++ ++++ + + L+K + FN+
Sbjct: 145 YVLGRFTSEEIPGVNHSIEKAADACEEWLNKPFLQIMNTFNS 186
>gi|229015454|ref|ZP_04172455.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH1273]
gi|229021659|ref|ZP_04178246.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH1272]
gi|228739662|gb|EEL90071.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH1272]
gi|228745838|gb|EEL95839.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH1273]
Length = 190
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 94/162 (58%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ +
Sbjct: 30 IDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVED 89
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+V +DD+ +P G LRLR G GGHNG+KS +++ G +EF R+R+GI RP M
Sbjct: 90 FIVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKNGMKVVD 148
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F + ++ ++++ + + L+K + FN+
Sbjct: 149 YVLGRFTSEELPGVNQSIEKTADACEEWLNKPFLQIMNTFNS 190
>gi|423370760|ref|ZP_17348164.1| peptidyl-tRNA hydrolase [Bacillus cereus VD142]
gi|401073347|gb|EJP81772.1| peptidyl-tRNA hydrolase [Bacillus cereus VD142]
Length = 207
Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 93/162 (57%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ +
Sbjct: 47 IDELAKRWSISLNEQKFKGVFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVED 106
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+V +DD+ +P G LRLR G GGHNG+KS +++ G +EF R+R+GI RP +
Sbjct: 107 FIVMYDDLDIPVGRLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKNGIKVVD 165
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F + ++ +++ + + L+K + FN+
Sbjct: 166 YVLGRFTSEEISGVNQSIENAADACEEWLNKPFLQIMNTFNS 207
>gi|86742630|ref|YP_483030.1| peptidyl-tRNA hydrolase [Frankia sp. CcI3]
gi|119390941|sp|Q2J5Z1.1|PTH_FRASC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|86569492|gb|ABD13301.1| peptidyl-tRNA hydrolase [Frankia sp. CcI3]
Length = 197
Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 104/167 (62%), Gaps = 7/167 (4%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAA---YYKL 57
++D AE G + + +A + + A +LA+P ++MNLSG GP+AA +YK+
Sbjct: 34 VVDLLAERTGSRLKSHRSRADVAETRLAGARAVLARPLSFMNLSG---GPVAAARSFYKV 90
Query: 58 PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQM 117
++R++V HD++ +P G +RL+ GG GHNGL+S+ + G R++ R+R+GIGRPPG+M
Sbjct: 91 EVSRLIVVHDELDIPFGAVRLKRGGGDNGHNGLRSISSAL-GTRDYLRVRVGIGRPPGRM 149
Query: 118 DPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTI 164
DP F+L+ F + R + L+ + +++L++ GL + ++ +
Sbjct: 150 DPADFVLRDFTSTERRELPLLLEHAADSVEMLIADGLEPAQNRYHAL 196
>gi|403238486|ref|ZP_10917072.1| peptidyl-tRNA hydrolase [Bacillus sp. 10403023]
Length = 187
Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 91/163 (55%), Gaps = 1/163 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID +E I ++ +GQG V VLL KP TYMNLSGES PL YY + +
Sbjct: 25 VIDELSEQLHIPLDKAKFNGVYGQGIVNGEKVLLLKPLTYMNLSGESIRPLMDYYDILVE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV +D++ LP G +RLR G GGHNG+KS++++ G +EF R+RIGI RP M
Sbjct: 85 DILVVYDELDLPVGKIRLREKGSAGGHNGMKSIIHHL-GTQEFKRIRIGISRPTNGMKIA 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F A + I +A+Q + +S + FN
Sbjct: 144 DYVLGRFQAEEVQDIKSAVQNSAVAAEKWVSAPFLQVMNEFNA 186
>gi|258513563|ref|YP_003189785.1| peptidyl-tRNA hydrolase [Desulfotomaculum acetoxidans DSM 771]
gi|257777268|gb|ACV61162.1| peptidyl-tRNA hydrolase [Desulfotomaculum acetoxidans DSM 771]
Length = 196
Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 93/164 (56%), Gaps = 4/164 (2%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID AE G+ + ++ GQG++G V+LAKP TYMNLSG+S L +YKL
Sbjct: 25 VIDQLAEKYGVDVQKKMMRSVLGQGWLGSQKVILAKPLTYMNLSGQSVQALMNWYKLTAQ 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRP--PGQMD 118
+LV DD+ L G LRLR G GGHNGLKS++ G +F RLR+GIGRP PGQ +
Sbjct: 85 ELLVICDDLNLEAGHLRLRKKGSDGGHNGLKSIIQAL-GTSDFPRLRLGIGRPSHPGQ-E 142
Query: 119 PKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+F+L KF E + + G + + + G+ + FN
Sbjct: 143 QVSFVLGKFAPQEAELLSQLIGRGEQAAAVWVENGIDAAMNEFN 186
>gi|423416555|ref|ZP_17393644.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG3X2-1]
gi|401110209|gb|EJQ18120.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG3X2-1]
Length = 186
Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 94/162 (58%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ +
Sbjct: 26 IDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+V +DD+ +P G LRLR G GGHNG+KS +++ G +EF R+R+GI RP M
Sbjct: 86 FIVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKNGMKVVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F + ++ ++++ + + L+K + FN+
Sbjct: 145 YVLGRFTSEELPGVNQSIEKTADACEEWLNKPFLQIMNTFNS 186
>gi|456012107|gb|EMF45824.1| Peptidyl-tRNA hydrolase [Planococcus halocryophilus Or1]
Length = 187
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 88/164 (53%), Gaps = 1/164 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A + K + + V+L KP TYMNLSGES G L YY + L
Sbjct: 25 VIDYLASQWNAPLTQSKFKGMYSVSHRPEGKVMLLKPLTYMNLSGESVGALMDYYNIDLK 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ LP G LRLR G GGHNG+KS++ + GN EF RLRIGI RPP M
Sbjct: 85 DIIVIYDDLDLPTGQLRLRQKGSAGGHNGIKSLIQHL-GNLEFNRLRIGISRPPAGMKVP 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTI 164
++LQ+F+ + A+++ + LSK E FN I
Sbjct: 144 DYVLQRFSKEEIPEMTAAIKKSAAACETWLSKPYVEVMNEFNGI 187
>gi|206972605|ref|ZP_03233548.1| peptidyl-tRNA hydrolase [Bacillus cereus AH1134]
gi|206732507|gb|EDZ49686.1| peptidyl-tRNA hydrolase [Bacillus cereus AH1134]
Length = 207
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 93/162 (57%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ +
Sbjct: 47 IDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVED 106
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+V +DD+ +P G LRLR G GGHNG+KS + + G +EF R+R+GI RP M
Sbjct: 107 FVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTILHL-GTQEFQRIRMGIDRPKNGMKVVD 165
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F + ++ ++++ + + L+K + FN+
Sbjct: 166 YVLGRFTSEEIADVNHSIEKAADACEEWLNKPFLQIMNTFNS 207
>gi|120405738|ref|YP_955567.1| peptidyl-tRNA hydrolase [Mycobacterium vanbaalenii PYR-1]
gi|166229427|sp|A1TEG1.1|PTH_MYCVP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119958556|gb|ABM15561.1| peptidyl-tRNA hydrolase [Mycobacterium vanbaalenii PYR-1]
Length = 192
Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 103/169 (60%), Gaps = 7/169 (4%)
Query: 1 MIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLP 58
++D A+ G VH K A G + PV+LAKP+ YMN SG GPLA +Y +
Sbjct: 28 VVDILADRMGEKFK-VHKKSGAEVATGRLAGRPVVLAKPRVYMNESGRQVGPLAKFYSVA 86
Query: 59 LNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMD 118
V++ HD++ + G +RL+ GG GHNGL+SV + GN +F R+R+GIGRPPG
Sbjct: 87 PADVVIVHDELDIDFGRIRLKAGGGVAGHNGLRSVASALGGN-DFQRVRVGIGRPPGHKS 145
Query: 119 PKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKY 167
+F+L+ FN++ R+ + T L++ + +LL+++GL E A+ NT+ +
Sbjct: 146 GASFVLENFNSVERKEVPTILEQAADATELLVAQGL-EPAQ--NTVHAW 191
>gi|326202451|ref|ZP_08192320.1| peptidyl-tRNA hydrolase [Clostridium papyrosolvens DSM 2782]
gi|325987569|gb|EGD48396.1| peptidyl-tRNA hydrolase [Clostridium papyrosolvens DSM 2782]
Length = 189
Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 96/161 (59%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID + I ++ + KA +G+G + +L KPQT+MNLSGES + +YKLP+ R
Sbjct: 29 IDYISAKYNIKLSRIGFKAVYGEGEIEGVRTILVKPQTFMNLSGESVREIVDWYKLPVER 88
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DD+ L G +R+R G G HNG+KS++ + +R F R+RIGIGR P + D
Sbjct: 89 LVVIYDDIDLEPGKIRVRPKGSSGTHNGMKSIIYQLQDDR-FPRVRIGIGRAPEKWDLAD 147
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L KF+ R+ ID ++++ + + G ++ +FN
Sbjct: 148 YVLSKFSKEDRQVIDQSVEKAAQAAIMTAKSGPEKAMNNFN 188
>gi|443635055|ref|ZP_21119225.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. inaquosorum KCTC
13429]
gi|443345108|gb|ELS59175.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. inaquosorum KCTC
13429]
Length = 188
Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 87/162 (53%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ I +N +G GFV VLL KP TYMNLSGE PL YY +
Sbjct: 25 VIDQLAKEWNIELNQNKFNGLYGTGFVSGKKVLLVKPLTYMNLSGECLRPLMDYYDVDNE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+ V +DD+ LP G +RLR G GGHNG+KS++ + G EF R+RIGIGRP M
Sbjct: 85 DLTVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQHL-GTSEFDRIRIGIGRPVNGMKVV 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F ID A+ + V+ + LSK E FN
Sbjct: 144 DYVLGSFTKEEAPEIDGAVDKSVKACEASLSKPFLEVMNEFN 185
>gi|423651372|ref|ZP_17626942.1| peptidyl-tRNA hydrolase [Bacillus cereus VD169]
gi|401278424|gb|EJR84357.1| peptidyl-tRNA hydrolase [Bacillus cereus VD169]
Length = 207
Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 94/162 (58%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ +
Sbjct: 47 IDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVED 106
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+V +DD+ +P G LRLR G GGHNG+KS +++ G +EF R+R+GI RP +
Sbjct: 107 FVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKNGIKVVD 165
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F + ++ ++++ + + L+K + FN+
Sbjct: 166 YVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQIMNTFNS 207
>gi|311070700|ref|YP_003975623.1| peptidyl-tRNA hydrolase [Bacillus atrophaeus 1942]
gi|419823436|ref|ZP_14346983.1| peptidyl-tRNA hydrolase [Bacillus atrophaeus C89]
gi|310871217|gb|ADP34692.1| peptidyl-tRNA hydrolase [Bacillus atrophaeus 1942]
gi|388472409|gb|EIM09185.1| peptidyl-tRNA hydrolase [Bacillus atrophaeus C89]
Length = 188
Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 86/161 (53%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ I +N +G GFV VLL KP TYMNLSGE PL YY +
Sbjct: 26 IDQLAKEWNIELNQTKFNGLYGTGFVSGQKVLLVKPLTYMNLSGECLRPLMDYYDVGNEE 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+ V +DD+ LP G +RLR G GGHNG+KS++ + G EF R+RIGIGRP M
Sbjct: 86 LKVIYDDLDLPAGKIRLRTKGSAGGHNGIKSLIQHL-GTSEFDRIRIGIGRPVNGMKVVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F ID A+ + V+ + LSK E FN
Sbjct: 145 YVLGAFTKEEAPAIDEAISKSVKACEASLSKPFLEVMNEFN 185
>gi|126701126|ref|YP_001090023.1| peptidyl-tRNA hydrolase [Clostridium difficile 630]
gi|254977127|ref|ZP_05273599.1| peptidyl-tRNA hydrolase [Clostridium difficile QCD-66c26]
gi|255094456|ref|ZP_05323934.1| peptidyl-tRNA hydrolase [Clostridium difficile CIP 107932]
gi|255102712|ref|ZP_05331689.1| peptidyl-tRNA hydrolase [Clostridium difficile QCD-63q42]
gi|255308533|ref|ZP_05352704.1| peptidyl-tRNA hydrolase [Clostridium difficile ATCC 43255]
gi|255316207|ref|ZP_05357790.1| peptidyl-tRNA hydrolase [Clostridium difficile QCD-76w55]
gi|255518869|ref|ZP_05386545.1| peptidyl-tRNA hydrolase [Clostridium difficile QCD-97b34]
gi|255652048|ref|ZP_05398950.1| peptidyl-tRNA hydrolase [Clostridium difficile QCD-37x79]
gi|260685022|ref|YP_003216307.1| peptidyl-tRNA hydrolase [Clostridium difficile CD196]
gi|260688680|ref|YP_003219814.1| peptidyl-tRNA hydrolase [Clostridium difficile R20291]
gi|306521785|ref|ZP_07408132.1| peptidyl-tRNA hydrolase [Clostridium difficile QCD-32g58]
gi|384362696|ref|YP_006200548.1| peptidyl-tRNA hydrolase [Clostridium difficile BI1]
gi|119390926|sp|Q181A2.1|PTH_CLOD6 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|115252563|emb|CAJ70406.1| Peptidyl-tRNA hydrolase (PTH) [Clostridium difficile 630]
gi|260211185|emb|CBA66658.1| peptidyl-tRNA hydrolase [Clostridium difficile CD196]
gi|260214697|emb|CBE07348.1| peptidyl-tRNA hydrolase [Clostridium difficile R20291]
Length = 186
Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 94/162 (58%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ IS+ + KA G+G VG VLL KPQTYMNLSGE+ + YYK+ L+
Sbjct: 25 VIDILAKEYNISVTKIKHKALIGEGRVGTEKVLLVKPQTYMNLSGETLIDIYKYYKVDLS 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ L G +R+R G G HNG+KS+ G+ +F R+R+G+ +P D
Sbjct: 85 NIVVVYDDIDLEVGKIRIRKKGSGGTHNGMKSITKCL-GSNDFPRVRVGVSKPEAGQDLA 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
F+L +F + I+ AL++ + + ++ + + S +N
Sbjct: 144 DFVLSRFRKEESDNINEALEKAADAIDSIIRENIDMSMNKYN 185
>gi|323490991|ref|ZP_08096185.1| peptidyl-tRNA hydrolase [Planococcus donghaensis MPA1U2]
gi|323395347|gb|EGA88199.1| peptidyl-tRNA hydrolase [Planococcus donghaensis MPA1U2]
Length = 187
Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 88/164 (53%), Gaps = 1/164 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A + K + + V+L KP TYMNLSGES L YY + L
Sbjct: 25 VIDYLASQWDAPLTQSKFKGMYSVSHRPEGKVILLKPLTYMNLSGESVAALMDYYNIELK 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ LP G LRLR G GGHNG+KS++ + GN+EF RLRIGI RPP M
Sbjct: 85 DIIVIYDDLDLPTGQLRLRQKGSAGGHNGIKSLIQHL-GNQEFNRLRIGISRPPAGMKVP 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTI 164
++LQ+F+ + A+++ + LSK E FN I
Sbjct: 144 DYVLQRFSTEEIPEMTAAIKKSAAACETWLSKPYIEVMNEFNGI 187
>gi|350264153|ref|YP_004875460.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|349597040|gb|AEP84828.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. spizizenii
TU-B-10]
Length = 188
Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 87/162 (53%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ I +N +G GFV VLL KP TYMNLSGE PL YY +
Sbjct: 25 VIDQLAKEWNIELNQNKFNGLYGTGFVSGKKVLLVKPLTYMNLSGECLRPLMDYYDVDNE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+ V +DD+ LP G +RLR G GGHNG+KS++ + G EF R+RIGIGRP M
Sbjct: 85 DLTVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQHL-GTSEFDRIRIGIGRPVNGMKVV 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F ID A+ + V+ + LSK E FN
Sbjct: 144 DYVLGSFTKEEAPDIDGAIDKSVKACEASLSKPFLEVMNEFN 185
>gi|126653273|ref|ZP_01725384.1| peptidyl-tRNA hydrolase [Bacillus sp. B14905]
gi|126589947|gb|EAZ84076.1| peptidyl-tRNA hydrolase [Bacillus sp. B14905]
Length = 186
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 92/162 (56%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+IDA AE G + + + VLL KP TYMNLSGE GPL Y+ + +
Sbjct: 25 VIDALAEKWGAPLTNSKFNGMYTTVHRPEGKVLLVKPLTYMNLSGECVGPLMDYFDIDVE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ L G LRLR G GGHNG+KS++ + G +EF R+R+GI RPP M
Sbjct: 85 DLIVIYDDLDLETGKLRLRQKGSAGGHNGIKSLIQHL-GTQEFNRIRVGISRPPAGMKVA 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L KF+ + + A+++ V +++ LSK + HFN
Sbjct: 144 DYVLAKFSKEDQVYMKEAIEKSVNAVEVSLSKPFLDVMNHFN 185
>gi|410461743|ref|ZP_11315388.1| peptidyl-tRNA hydrolase [Bacillus azotoformans LMG 9581]
gi|409925447|gb|EKN62660.1| peptidyl-tRNA hydrolase [Bacillus azotoformans LMG 9581]
Length = 187
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 91/162 (56%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID G+S+N K +G G + V+L KP TYMNLSGES PL YY++ +
Sbjct: 25 VIDELCRRWGLSLNKEKFKGIYGMGSINGEKVILLKPLTYMNLSGESIRPLLDYYEIDVE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ LP G +RLR G GGHNG+KS + + G + F RLRIGI RP M
Sbjct: 85 DLIVIYDDLDLPTGKIRLRTKGSAGGHNGIKSTIQHL-GTQNFNRLRIGINRPVNGMKVP 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F+A + I+ A+++ + + LS E FN
Sbjct: 144 DYVLGVFSAEEQPEIEGAIKQAADACEKWLSHTFLEVMNEFN 185
>gi|339442232|ref|YP_004708237.1| hypothetical protein CXIVA_11690 [Clostridium sp. SY8519]
gi|338901633|dbj|BAK47135.1| hypothetical protein CXIVA_11690 [Clostridium sp. SY8519]
Length = 206
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 2/166 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PLN 60
+D A GI+MN C+A G G+ VLLAKP TYMNLSG S L YY+L P
Sbjct: 26 VDVLARKCGITMNRRQCQALTGTGYCEGQKVLLAKPLTYMNLSGHSIRDLMRYYRLDPEQ 85
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ L G +R+R G GGHNG+K ++ G +F+R+RIG+G P D
Sbjct: 86 DLIVLYDDISLDPGSIRVRKKGSAGGHNGIKDII-AMTGTSDFSRVRIGVGAKPRDWDLA 144
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 166
++L + R++ D AL+E + + L+++ E+ FN +K
Sbjct: 145 DYVLGRMQGEDRKQADQALEEAAQAVGLMITGRTDEAMNRFNRKKK 190
>gi|145341531|ref|XP_001415860.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576083|gb|ABO94152.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 189
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 106/166 (63%), Gaps = 3/166 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++DA A GI + + +A G G +G + V+LAKPQT+MNLSG+S + +K+ +
Sbjct: 24 VVDALARRAGIELTSTKHRAVLGVGKLGRSAVVLAKPQTFMNLSGKSVREMMRAFKIGKS 83
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN-FRGNREFARLRIGIGRPPGQMDP 119
R+++ +DD+ G LR++ +G HGGHNG++SV+++ RG+R FAR++IGIGRP +
Sbjct: 84 RIVIVYDDLETKLGELRMKTSGSHGGHNGVRSVIDDATRGDRSFARVKIGIGRPKDENTA 143
Query: 120 -KAFLLQKFNAIARERIDTALQEGVEVLK-LLLSKGLTESARHFNT 163
++L +F+ +++ A+++ VE L+ +LL ++ +NT
Sbjct: 144 VYEYVLSRFDEDDAVKVNGAVEDAVEALQEVLLDNKFGDAMTRYNT 189
>gi|312194511|ref|YP_004014572.1| peptidyl-tRNA hydrolase [Frankia sp. EuI1c]
gi|311225847|gb|ADP78702.1| peptidyl-tRNA hydrolase [Frankia sp. EuI1c]
Length = 195
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 98/164 (59%), Gaps = 1/164 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D AE G + + +A Q + +LA+P+TYMN+SG L +++K+
Sbjct: 32 VVDLLAERHGARLRSHKARADAAQLRLAGVSAVLARPRTYMNVSGPPVAALRSFFKVDPA 91
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
RV+V HD++ +P G +RL+ GG GHNGL+S+ ++ G R++ R+R GIGRPPG+MDP
Sbjct: 92 RVIVVHDELDIPFGAVRLKRGGGDNGHNGLRSITSSL-GTRDYLRVRFGIGRPPGRMDPA 150
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTI 164
F+L+ F R+ + + + ++ L+++GL + F+ +
Sbjct: 151 DFVLRDFAVPERKELPFLVDRAADAVEALVAEGLEPAQNRFHAL 194
>gi|333977672|ref|YP_004515617.1| peptidyl-tRNA hydrolase [Desulfotomaculum kuznetsovii DSM 6115]
gi|333821153|gb|AEG13816.1| Peptidyl-tRNA hydrolase [Desulfotomaculum kuznetsovii DSM 6115]
Length = 190
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 99/164 (60%), Gaps = 2/164 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A I ++ V +A GQG V ++LAKP TYMN SGE+ L +YKL +
Sbjct: 25 VVDRLARDLDIKIDRVFLRALVGQGQVAGQRLVLAKPLTYMNRSGEAVAALLNWYKLTPS 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPG-QMDP 119
++LV DD+ LP G LRLR +GG GGH GL+S++ G+REFARLR+GIGRP G +
Sbjct: 85 QLLVVSDDLDLPTGRLRLRKSGGDGGHRGLRSII-ELVGSREFARLRVGIGRPSGPDCEV 143
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F ++ A+ + + +++ L++GL + FN
Sbjct: 144 VDWVLSRFTEEEGPLMEKAVADASKAVQVALTRGLDAAMNLFNA 187
>gi|311028984|ref|ZP_07707074.1| peptidyl-tRNA hydrolase [Bacillus sp. m3-13]
gi|311032272|ref|ZP_07710362.1| peptidyl-tRNA hydrolase [Bacillus sp. m3-13]
Length = 186
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 90/162 (55%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ I + K FGQG + VLL KP TYMNLSGE PL +YKL +
Sbjct: 25 VIDELADKWNIPLTQSKFKGIFGQGTINGEKVLLVKPLTYMNLSGECVRPLLDFYKLDVE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ LP G LRLR G GGHNG+KS++ + + + F R+R+GI RP
Sbjct: 85 DLVVIYDDLDLPAGKLRLRQKGSAGGHNGIKSLIQHLQ-TQNFNRIRMGIDRPKNGPSIS 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L KF R ID ++++ E + LSK + FN
Sbjct: 144 DYVLGKFQTEERPAIDDSIKKAAEACEENLSKEFLQVMNTFN 185
>gi|357053332|ref|ZP_09114428.1| peptidyl-tRNA hydrolase [Clostridium clostridioforme 2_1_49FAA]
gi|355385807|gb|EHG32855.1| peptidyl-tRNA hydrolase [Clostridium clostridioforme 2_1_49FAA]
Length = 216
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 97/162 (59%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ G ++ K +G+G +G VLL KPQT+MNLSGES A +YK+
Sbjct: 52 VIDVLADRLGTTVEEKKFKGCYGRGIIGGQKVLLLKPQTFMNLSGESVRAAADFYKVDPE 111
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+++ +DD+ L G LR+R G GGHNG+K+++ + G +EF R+++G+G P +MD
Sbjct: 112 HIIIVYDDISLDVGQLRIRKKGSAGGHNGIKNIIAHL-GTQEFPRIKVGVGDKPKKMDLA 170
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F+ R ++ A +E +++++ +G + FN
Sbjct: 171 DYVLSRFSKEDRAVMEDAFREAAGAVEMMIIQGADAAMNQFN 212
>gi|225028226|ref|ZP_03717418.1| hypothetical protein EUBHAL_02498 [Eubacterium hallii DSM 3353]
gi|224954538|gb|EEG35747.1| aminoacyl-tRNA hydrolase [Eubacterium hallii DSM 3353]
Length = 717
Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 67/169 (39%), Positives = 100/169 (59%), Gaps = 4/169 (2%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID AE+ I++N KA G G +G + VLL KP TYMNLSGES P+ +YKL L+
Sbjct: 547 IDRIAEANRININQHKFKAMVGSGIIGGSKVLLVKPLTYMNLSGESIRPIMDFYKLDLSD 606
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIG--RPPGQMDP 119
+LV +DD+ L G+LRLR G GGHNG+KS++ + G+ F R+R+GIG + PGQ D
Sbjct: 607 ILVIYDDISLEPGMLRLRTKGSAGGHNGMKSIIKHLGGD-TFPRIRVGIGGEKHPGQ-DL 664
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYK 168
++L F +E + AL + + +L +E+ ++ +K +
Sbjct: 665 ADYVLGHFKDDEKELLSDALDKAEKAAELFAQDEFSEAMNKYSVGKKKR 713
>gi|255524038|ref|ZP_05391000.1| Aminoacyl-tRNA hydrolase [Clostridium carboxidivorans P7]
gi|296186895|ref|ZP_06855296.1| peptidyl-tRNA hydrolase [Clostridium carboxidivorans P7]
gi|255512325|gb|EET88603.1| Aminoacyl-tRNA hydrolase [Clostridium carboxidivorans P7]
gi|296048609|gb|EFG88042.1| peptidyl-tRNA hydrolase [Clostridium carboxidivorans P7]
Length = 187
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 98/165 (59%), Gaps = 3/165 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID ++ IS+N K +G+G + V+L KP TYMNLSGES + +YK+
Sbjct: 25 IIDLVSDKYNISINREKFKGMYGEGSIASEKVILLKPSTYMNLSGESIREVVNFYKISNE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+V+V +DD+ L G LR+R G GGHNG+KS++ N G F R+++G+G+P ++
Sbjct: 85 QVIVLYDDISLEVGRLRIREKGSAGGHNGIKSIIANL-GTDVFPRIKVGVGQPKSEL--V 141
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQ 165
+ +L +FN RE++ A V+ ++ ++ G+ E+ FN+ +
Sbjct: 142 SHVLGRFNVEDREKVIKAFDVSVDAVEHIIKYGVDEAMNKFNSFK 186
>gi|307244017|ref|ZP_07526136.1| aminoacyl-tRNA hydrolase [Peptostreptococcus stomatis DSM 17678]
gi|306492541|gb|EFM64575.1| aminoacyl-tRNA hydrolase [Peptostreptococcus stomatis DSM 17678]
Length = 186
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 96/161 (59%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D AE GI ++ + KA G+G +G V+L KPQTYMNLSGES + +YK+ ++
Sbjct: 26 LDILAEEYGIKIDKIKHKALIGEGRIGSEKVVLVKPQTYMNLSGESVQSVFQFYKVDMDH 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DD+ L G LR+R G G HNG+KS++ G++EF R+R+G+ RP D
Sbjct: 86 LIVVYDDIDLDIGKLRIRKKGSAGSHNGMKSIIKCL-GSQEFPRVRVGVSRPDPNRDLAD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
F+L + + E + + L++ V+ ++ ++ + + +N
Sbjct: 145 FVLSRVSKDQAEDMKSGLEKAVKTVEEIIRTDIDMAMNKYN 185
>gi|300087756|ref|YP_003758278.1| peptidyl-tRNA hydrolase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299527489|gb|ADJ25957.1| peptidyl-tRNA hydrolase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 188
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 93/161 (57%), Gaps = 4/161 (2%)
Query: 5 FAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLV 64
FA IS N C++ G+G +GD PV+LAKPQTYMNLSG++ L YK+ ++V
Sbjct: 29 FARFHNISFNKRSCQSRIGEGKIGDQPVILAKPQTYMNLSGQAVAALIKRYKVTPKDIIV 88
Query: 65 FHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAF-- 122
HDD+ LP G +R+R GG GGHNG+KS++ + G F R+++GIGRP D
Sbjct: 89 IHDDLDLPIGKIRIRLEGGAGGHNGIKSIIQSI-GTICFTRIKVGIGRPTTTGDRIEIVD 147
Query: 123 -LLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+L +F+ E I+ + + + L+ ++S + FN
Sbjct: 148 HVLTQFSQDEAEMINKTVIDALGALETMISGDYNAAMNKFN 188
>gi|16077121|ref|NP_387934.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. subtilis str.
168]
gi|221307863|ref|ZP_03589710.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. subtilis str.
168]
gi|221312185|ref|ZP_03593990.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. subtilis str.
NCIB 3610]
gi|221317118|ref|ZP_03598412.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221321381|ref|ZP_03602675.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. subtilis str.
SMY]
gi|321313723|ref|YP_004206010.1| peptidyl-tRNA hydrolase [Bacillus subtilis BSn5]
gi|384173714|ref|YP_005555099.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|386756632|ref|YP_006229848.1| peptidyl-tRNA hydrolase [Bacillus sp. JS]
gi|402774296|ref|YP_006628240.1| peptidyl-tRNA hydrolase [Bacillus subtilis QB928]
gi|418030601|ref|ZP_12669086.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|428277468|ref|YP_005559203.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. natto BEST195]
gi|430757318|ref|YP_007211206.1| Stage V sporulatio protein SpoVC [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|452913216|ref|ZP_21961844.1| peptidyl-tRNA hydrolase [Bacillus subtilis MB73/2]
gi|586021|sp|P37470.1|PTH_BACSU RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH; AltName:
Full=Stage V sporulation protein C
gi|467442|dbj|BAA05288.1| stage V sporulation [Bacillus subtilis]
gi|2632320|emb|CAB11829.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. subtilis str.
168]
gi|291482425|dbj|BAI83500.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. natto BEST195]
gi|320019997|gb|ADV94983.1| peptidyl-tRNA hydrolase [Bacillus subtilis BSn5]
gi|349592938|gb|AEP89125.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|351471660|gb|EHA31773.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|384929914|gb|AFI26592.1| peptidyl-tRNA hydrolase [Bacillus sp. JS]
gi|402479482|gb|AFQ55991.1| Peptidyl-tRNA hydrolase [Bacillus subtilis QB928]
gi|407955744|dbj|BAM48984.1| peptidyl-tRNA hydrolase [Bacillus subtilis BEST7613]
gi|407963015|dbj|BAM56254.1| peptidyl-tRNA hydrolase [Bacillus subtilis BEST7003]
gi|430021838|gb|AGA22444.1| Stage V sporulatio protein SpoVC [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|452118244|gb|EME08638.1| peptidyl-tRNA hydrolase [Bacillus subtilis MB73/2]
Length = 188
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 87/162 (53%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ I +N +G GFV VLL KP TYMNLSGE PL YY +
Sbjct: 25 VIDQLAKEWNIELNQNKFNGLYGTGFVSGKKVLLVKPLTYMNLSGECLRPLMDYYDVDNE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+ V +DD+ LP G +RLR G GGHNG+KS++ + G EF R+RIGIGRP M
Sbjct: 85 DLTVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQHL-GTSEFDRIRIGIGRPVNGMKVV 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F I+ A+ + V+ + LSK E FN
Sbjct: 144 DYVLGSFTKEEAPEIEEAVDKSVKACEASLSKPFLEVMNEFN 185
>gi|187777478|ref|ZP_02993951.1| hypothetical protein CLOSPO_01046 [Clostridium sporogenes ATCC
15579]
gi|187774406|gb|EDU38208.1| aminoacyl-tRNA hydrolase [Clostridium sporogenes ATCC 15579]
Length = 189
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 97/164 (59%), Gaps = 3/164 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID AE I +N K ++G+G +G+ V+L KP TYMNLSGES A +YK+
Sbjct: 26 IDIIAEEYNIEINRQKFKGSYGEGRIGNEKVILLKPSTYMNLSGESVIEAANFYKINKEN 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DDM + G LR+R G GGHNG+K+++ + + F R+R+GIG+P G +
Sbjct: 86 IIVIYDDMSIDIGKLRIRGKGSAGGHNGIKNIIQHLNSDI-FPRVRVGIGQPDGNV--VN 142
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQ 165
++L KF+ RE I+ L V+ ++ G+TE+ +N ++
Sbjct: 143 YVLGKFSKEQREIIEKTLAMSVKACISIVEDGVTEAMNKYNGVK 186
>gi|240144342|ref|ZP_04742943.1| aminoacyl-tRNA hydrolase [Roseburia intestinalis L1-82]
gi|257203686|gb|EEV01971.1| aminoacyl-tRNA hydrolase [Roseburia intestinalis L1-82]
Length = 212
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 100/167 (59%), Gaps = 3/167 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PL 59
++DA AE IS++ KA G+G + V+LAKPQTYMNLSGES L YYK+ P
Sbjct: 45 VMDALAEKYNISISEKKHKALCGKGVINGVKVVLAKPQTYMNLSGESVAELVNYYKMDPE 104
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
++V +DD+ L G LR+R G GGHNG+K+++ G + F R+++G+G P D
Sbjct: 105 EEMIVIYDDISLAPGNLRIRKKGSAGGHNGIKNIIA-MTGTQNFLRIKVGVGEKPAGWDL 163
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 166
+L F+A R ++ A+ VE +++++ G T++A + ++K
Sbjct: 164 ADHVLGHFDAADRAEVEKAIGHAVEAAEMMIT-GETDAAMNRYNVKK 209
>gi|323691737|ref|ZP_08105997.1| peptidyl-tRNA hydrolase [Clostridium symbiosum WAL-14673]
gi|323504215|gb|EGB20017.1| peptidyl-tRNA hydrolase [Clostridium symbiosum WAL-14673]
Length = 202
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 94/161 (58%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D A+ I + KA G+G + V+L KPQTYMNLSGES + YYK +
Sbjct: 26 LDELADRYNIDVREKAHKALIGKGMIEGNKVILVKPQTYMNLSGESIRSVMDYYKTEPSE 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+V +DD+ L G +R+R G GGHNG+K+++ + G +EF R+RIG+G P +MD
Sbjct: 86 FIVIYDDISLEPGQIRIRKKGSAGGHNGIKNIIAHL-GTQEFPRIRIGVGEKPARMDLAD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F+ +ER++ A ++GV +++ G+ + FN
Sbjct: 145 YVLGHFSKEEKERMEQAFKDGVAAAVAMMNDGVDTAMNRFN 185
>gi|291561351|emb|CBL40150.1| peptidyl-tRNA hydrolase [butyrate-producing bacterium SS3/4]
Length = 191
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 100/168 (59%), Gaps = 1/168 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++DA AE G ++ KA G+G +G V+L KPQTYMN SGES A YYK+
Sbjct: 25 VMDALAEKIGADISEKKHKALCGKGVIGGEKVILMKPQTYMNSSGESIRAAADYYKVDPE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+L+ +DD+ L G LR+R G GGHNG+KS++ + G +EF R+++G+G P +MD
Sbjct: 85 DILIVYDDISLAPGQLRIRAKGSAGGHNGIKSIIAHL-GTQEFPRVKVGVGEKPSRMDLA 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYK 168
++L F+ + +D A++E + + +++ G+ ++ N ++ K
Sbjct: 144 DYVLGHFSKEEQATMDEAVKEAADAVCEIVNVGIAQAMNDHNRKKEEK 191
>gi|118444703|ref|YP_877115.1| peptidyl-tRNA hydrolase [Clostridium novyi NT]
gi|166199328|sp|A0PXL3.1|PTH_CLONN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|118135159|gb|ABK62203.1| peptidyl-tRNA hydrolase [Clostridium novyi NT]
Length = 188
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 94/162 (58%), Gaps = 2/162 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID +E I +N K +G G + + V+L KP TYMNLSGES + +YK+P
Sbjct: 25 IIDVISEKYNIDLNKKKFKGMYGDGTIANEKVILLKPLTYMNLSGESIKEVTDFYKIPKE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V+V +DD+ L G +R+R G GGHNG+K+++ +F G+ F R+++G+G+P Q D
Sbjct: 85 NVIVIYDDISLEVGRMRIREKGSAGGHNGIKNIIAHF-GSDVFPRIKVGVGQPV-QRDLV 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+ +L KFN RE + + + + ++ KG E+ FN
Sbjct: 143 SHVLGKFNKDDREILSKVFEAASDAAENIIEKGTAEAMNKFN 184
>gi|449092766|ref|YP_007425257.1| peptidyl-tRNA hydrolase [Bacillus subtilis XF-1]
gi|449026681|gb|AGE61920.1| peptidyl-tRNA hydrolase [Bacillus subtilis XF-1]
Length = 188
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 87/162 (53%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ I +N +G GFV VLL KP TYMNLSGE PL YY +
Sbjct: 25 VIDQLAKEWNIELNQNKFNGLYGTGFVSGKKVLLVKPLTYMNLSGECLRPLMDYYDVDNE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+ V +DD+ LP G +RLR G GGHNG+KS++ + G EF R+RIGIGRP M
Sbjct: 85 DLTVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQHL-GTSEFDRIRIGIGRPVNGMKVV 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F I+ A+ + V+ + LSK E FN
Sbjct: 144 DYVLGSFTKEEAPEIEGAVDKSVKACEASLSKPFLEVMNEFN 185
>gi|365926653|ref|ZP_09449416.1| peptidyl-tRNA hydrolase [Lactobacillus mali KCTC 3596 = DSM 20444]
gi|420264919|ref|ZP_14767518.1| peptidyl-tRNA hydrolase [Lactobacillus mali KCTC 3596 = DSM 20444]
gi|394429555|gb|EJF01983.1| peptidyl-tRNA hydrolase [Lactobacillus mali KCTC 3596 = DSM 20444]
Length = 187
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 95/169 (56%), Gaps = 7/169 (4%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A+ +GIS N V +AT ++LAKP TYMN SG S PL +YK+P+
Sbjct: 25 VLDELAKREGISFNKVKNEATLADFMFKGEKIILAKPLTYMNESGRSVRPLMDFYKIPVE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V+V HDDM LP G LRLR G GGHNG+KS++++ G +EF R++IGI P +M
Sbjct: 85 DVIVIHDDMDLPVGHLRLRQKGSAGGHNGIKSLISHL-GTQEFKRMKIGIDHPQ-RMSVV 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKH 169
++L +F + +++ + E + L ++ T+ KY H
Sbjct: 143 NWVLSRFTKEQQNQLERGINEALAAL-----DNWIDTDNFMGTMNKYNH 186
>gi|302669663|ref|YP_003829623.1| peptidyl-tRNA hydrolase Pth [Butyrivibrio proteoclasticus B316]
gi|302394136|gb|ADL33041.1| peptidyl-tRNA hydrolase Pth [Butyrivibrio proteoclasticus B316]
Length = 226
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 96/166 (57%), Gaps = 2/166 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PLN 60
IDA ++ GI + KA FG+G +G+ V+L KP TYMNLSGE+ P+ Y+K+
Sbjct: 59 IDALSDKYGIELTETKFKAAFGKGRIGNDRVILVKPLTYMNLSGEAIRPICDYFKVDSKE 118
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V DD+ L G +R+R G GGHNGLKS++ G+ EF R+R+G+G+ P + D
Sbjct: 119 ELIVISDDVELDVGNIRVRPKGSAGGHNGLKSIIAQL-GHSEFNRVRVGVGKKPKEWDMV 177
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 166
++L F I + V ++ +++ G+ + +NTI+K
Sbjct: 178 DWVLGTFQGEDAVSIKEGIDRAVAAVEEIMAAGVDSAMNKYNTIKK 223
>gi|167758783|ref|ZP_02430910.1| hypothetical protein CLOSCI_01125 [Clostridium scindens ATCC 35704]
gi|336421857|ref|ZP_08602012.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 5_1_57FAA]
gi|167663523|gb|EDS07653.1| aminoacyl-tRNA hydrolase [Clostridium scindens ATCC 35704]
gi|336009706|gb|EGN39697.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 5_1_57FAA]
Length = 194
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 97/163 (59%), Gaps = 2/163 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PL 59
+ID A IS++ +A G+G + V+LAKPQTYMNLSGES G L YYK+
Sbjct: 25 VIDTLAGKYNISVDGRKNRALIGKGIIEGKKVILAKPQTYMNLSGESLGGLVDYYKVDEE 84
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
+ LV +DD+ L G LR+R G GGHNG+K+++++ G F R+++G+G P + D
Sbjct: 85 SEFLVVYDDISLDVGQLRIRKKGSAGGHNGMKNIISHL-GTEVFPRIKVGVGEKPKKYDL 143
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F+ R ++ Q+ VE ++++L + E+ FN
Sbjct: 144 ADYVLSRFSKEERAIMEEGCQKAVEAVEMILRGEMEEAMNKFN 186
>gi|331090627|ref|ZP_08339478.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 2_1_46FAA]
gi|330401067|gb|EGG80662.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 2_1_46FAA]
Length = 190
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 99/167 (59%), Gaps = 2/167 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+IDA A+ I+M+ +A G+G + V+LAKPQTYMNLSGES L Y+K+
Sbjct: 25 VIDAIADKYNITMDIRKHRAFCGKGIIAGQKVILAKPQTYMNLSGESVRSLVDYFKIDEE 84
Query: 61 R-VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
+ ++V +DD+ L G LR+R G GGHNG+K+++ + G+ F R+++G+G P Q D
Sbjct: 85 QELIVIYDDISLDVGQLRIRKKGSAGGHNGIKNIIAHL-GHSVFPRIKVGVGEKPKQYDL 143
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 166
++L F+ RE ++ Q V+ ++L+++ + + FN K
Sbjct: 144 ADYVLGHFSKAEREVMEDGYQNAVKAIELMVNDEIETAMNEFNKKTK 190
>gi|210608665|ref|ZP_03287942.1| hypothetical protein CLONEX_00121 [Clostridium nexile DSM 1787]
gi|210152922|gb|EEA83928.1| hypothetical protein CLONEX_00121 [Clostridium nexile DSM 1787]
Length = 224
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 94/163 (57%), Gaps = 2/163 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PL 59
+ID AE IS++ C+A G+G + VLL KPQTYMNLSGES G + YYK+ P
Sbjct: 58 VIDVLAEKYNISVDARKCRAFCGKGVIAGQKVLLVKPQTYMNLSGESVGGIVNYYKIDPE 117
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
+ +LV +DD+ L G LR+R G GGHNG+KS++ + G F R+++G+G P D
Sbjct: 118 SDLLVIYDDISLDVGQLRIRKKGSAGGHNGIKSIIAHL-GTTVFPRIKVGVGEKPKNYDL 176
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F+ RE ++ + + ++ ++ + + FN
Sbjct: 177 ADYVLGHFSKQERELMEEGYEHASDAVEQIVQGEIEAAMNVFN 219
>gi|294496924|ref|YP_003560624.1| peptidyl-tRNA hydrolase [Bacillus megaterium QM B1551]
gi|384049328|ref|YP_005497345.1| peptidyl-tRNA hydrolase [Bacillus megaterium WSH-002]
gi|294346861|gb|ADE67190.1| peptidyl-tRNA hydrolase [Bacillus megaterium QM B1551]
gi|345447019|gb|AEN92036.1| Peptidyl-tRNA hydrolase [Bacillus megaterium WSH-002]
Length = 185
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 89/161 (55%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID AE IS++ +G G + V+L KP TYMNLSGES PL Y+ + +
Sbjct: 26 IDKIAEQFMISLDKTKFNGIYGTGIIKGEKVILLKPLTYMNLSGESIRPLMDYFDIDVED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+LV +DD+ LPCG +RLR G GGHNG+KS++ + + +EF R+RIGI RP M
Sbjct: 86 LLVIYDDLDLPCGKVRLRTKGSPGGHNGIKSIIQHLK-TQEFNRIRIGIDRPKNGMKVVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F ++ A++ V + L K E +N
Sbjct: 145 YVLGRFTEDEMVHMEEAMKTSVHASEDFLGKTFLEVMNRYN 185
>gi|291087007|ref|ZP_06345123.2| aminoacyl-tRNA hydrolase [Clostridium sp. M62/1]
gi|291076615|gb|EFE13979.1| aminoacyl-tRNA hydrolase [Clostridium sp. M62/1]
Length = 202
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 93/161 (57%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
IDA A+ GI + KA G+G + V+LAKPQTYMNLSGES L YYK+
Sbjct: 29 IDALADRYGIDVREKAHKALIGKGVIEGQKVILAKPQTYMNLSGESIRALVDYYKVTQEE 88
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+++ DD+ L G LR+R G GGHNG+KS++ + G +EF R+++G+G P +MD
Sbjct: 89 LVIIFDDISLEPGQLRIRKKGSAGGHNGIKSIIAHL-GTQEFTRIKVGVGEKPPRMDLAD 147
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F ++ + A + + ++++G + +N
Sbjct: 148 YVLGRFAKEEQDTMKEAFETAAKAAVAIMTEGADAAMNQYN 188
>gi|347532905|ref|YP_004839668.1| aminoacyl-tRNA hydrolase [Roseburia hominis A2-183]
gi|345503053|gb|AEN97736.1| aminoacyl-tRNA hydrolase [Roseburia hominis A2-183]
Length = 194
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 95/163 (58%), Gaps = 2/163 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PL 59
++DA AE IS++ KA FG+G +G V+LAKPQT+MNLSGES L YYK+ P
Sbjct: 25 VMDALAEKYNISISESGHKALFGKGMIGGQKVILAKPQTFMNLSGESVAELLHYYKIDPE 84
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
+LV DD+ L G +R+R G GGHNG+K+++ G F R+++G+G P D
Sbjct: 85 EELLVIFDDISLAPGNIRIRKKGSAGGHNGIKNII-AMTGTENFKRIKVGVGEKPAGWDL 143
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+L + + R + A++E V+ +++L + ++ FN
Sbjct: 144 ADHVLGRMSEEDRAAFEEAVKESVKAAEMILEDEIDQAMNDFN 186
>gi|52078548|ref|YP_077339.1| peptidyl-tRNA hydrolase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|319648577|ref|ZP_08002791.1| peptidyl-tRNA hydrolase [Bacillus sp. BT1B_CT2]
gi|404487418|ref|YP_006711524.1| peptidyl-tRNA hydrolase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|423680446|ref|ZP_17655285.1| peptidyl-tRNA hydrolase [Bacillus licheniformis WX-02]
gi|68052915|sp|Q65PG8.1|PTH_BACLD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|52001759|gb|AAU21701.1| peptidyl-tRNA hydrolase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52346412|gb|AAU39046.1| peptidyl-tRNA hydrolase Pth [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317389344|gb|EFV70157.1| peptidyl-tRNA hydrolase [Bacillus sp. BT1B_CT2]
gi|383441552|gb|EID49261.1| peptidyl-tRNA hydrolase [Bacillus licheniformis WX-02]
Length = 188
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 87/161 (54%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID ++ I ++ +G GFV VLL KP TYMNLSGE PL YY++P++
Sbjct: 26 IDELSKEWNIPLDKTKFNGQYGIGFVSGKKVLLVKPLTYMNLSGECLRPLLDYYEIPVDN 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+ V +DD+ LP G +RLR G GGHNG+KS + + G EF R+RIGIGRP M
Sbjct: 86 LKVIYDDLDLPTGRIRLRTKGSAGGHNGIKSTIQHL-GTSEFNRIRIGIGRPVNGMKVVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F I A+++ + + L K E FN
Sbjct: 145 YVLGAFTDEEEPAIKEAVRQSAKACEASLEKPFLEVMNEFN 185
>gi|10802611|gb|AAG23529.1|AF244580_1 peptidyl-tRNA hydrolase [Carboxydothermus hydrogenoformans]
Length = 186
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 96/162 (59%), Gaps = 2/162 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A+ GI + K+ G+G + VLL KPQTYMNLSG + ++YKLPL+
Sbjct: 24 VVDELAKKHGILITKRKFKSLVGEGEILGVKVLLLKPQTYMNLSGTAVQEAVSFYKLPLS 83
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
R++V +DD+ LP G + LR G GGH G+ S+++ G+ E RL+IGIGR P D K
Sbjct: 84 RLVVVYDDLDLPLGKICLRLKGSAGGHRGMGSIISCL-GSEEIPRLKIGIGR-PAVGDVK 141
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++LQ F RE ++ L+ E + + L++G ++ FN
Sbjct: 142 DYVLQPFTGAEREILEPTLKLAAEAITVALTEGFNKAMTDFN 183
>gi|423080832|ref|ZP_17069449.1| aminoacyl-tRNA hydrolase [Clostridium difficile 002-P50-2011]
gi|423087233|ref|ZP_17075622.1| aminoacyl-tRNA hydrolase [Clostridium difficile 050-P50-2011]
gi|357545171|gb|EHJ27151.1| aminoacyl-tRNA hydrolase [Clostridium difficile 050-P50-2011]
gi|357552321|gb|EHJ34095.1| aminoacyl-tRNA hydrolase [Clostridium difficile 002-P50-2011]
Length = 186
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 93/162 (57%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ IS+ + KA G+G VG VLL KPQTYMNLSGE+ + YYK+ L+
Sbjct: 25 VIDILAKEYNISVTKIKHKALIGEGRVGTEKVLLVKPQTYMNLSGETLIDIYKYYKIDLS 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ L G +R+R G G HNG+KS+ G+ +F R+R+G+ +P D
Sbjct: 85 NIVVVYDDIDLEVGKIRIRKKGSGGTHNGMKSITKCL-GSNDFPRVRVGVSKPEVGQDLA 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
F+L +F + I+ AL++ + ++ + + S +N
Sbjct: 144 DFVLSRFRKEESDNINEALEKAAYAIDSIIRENIDMSMNKYN 185
>gi|376263010|ref|YP_005149730.1| peptidyl-tRNA hydrolase [Clostridium sp. BNL1100]
gi|373947004|gb|AEY67925.1| peptidyl-tRNA hydrolase [Clostridium sp. BNL1100]
Length = 189
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 96/161 (59%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID + I ++ + KA +G+G + +L KPQT+MNLSGES + +YKLP+ R
Sbjct: 29 IDYISAKYNIKLSKIGFKAVYGEGEIEGVRTILVKPQTFMNLSGESVREIVDWYKLPIER 88
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+ V +DD+ L G +R+R G G HNG+KS++ + +R F R+RIGIGR P + D
Sbjct: 89 LTVIYDDIDLEPGKIRVRPKGSSGTHNGMKSIIYQLQDDR-FPRVRIGIGRAPEKWDLAD 147
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L KF+ R+ ID ++++ + ++ G ++ +FN
Sbjct: 148 YVLSKFSKEDRQVIDQSVEKAAQAAIMIAQSGPEKAMNNFN 188
>gi|295090935|emb|CBK77042.1| peptidyl-tRNA hydrolase [Clostridium cf. saccharolyticum K10]
gi|295116084|emb|CBL36931.1| peptidyl-tRNA hydrolase [butyrate-producing bacterium SM4/1]
Length = 199
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 93/161 (57%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
IDA A+ GI + KA G+G + V+LAKPQTYMNLSGES L YYK+
Sbjct: 26 IDALADRYGIDVREKAHKALIGKGVIEGQKVILAKPQTYMNLSGESIRALVDYYKVTQEE 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+++ DD+ L G LR+R G GGHNG+KS++ + G +EF R+++G+G P +MD
Sbjct: 86 LVIIFDDISLEPGQLRIRKKGSAGGHNGIKSIIAHL-GTQEFTRIKVGVGEKPPRMDLAD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F ++ + A + + ++++G + +N
Sbjct: 145 YVLGRFAKEEQDTMKEAFETAAKAAVAIMTEGADAAMNQYN 185
>gi|299536724|ref|ZP_07050034.1| peptidyl-tRNA hydrolase [Lysinibacillus fusiformis ZC1]
gi|424740017|ref|ZP_18168429.1| peptidyl-tRNA hydrolase [Lysinibacillus fusiformis ZB2]
gi|298727838|gb|EFI68403.1| peptidyl-tRNA hydrolase [Lysinibacillus fusiformis ZC1]
gi|422946389|gb|EKU40800.1| peptidyl-tRNA hydrolase [Lysinibacillus fusiformis ZB2]
Length = 188
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 89/163 (54%), Gaps = 1/163 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+IDA AE G + + + VLL KP TYMNLSGE GPL Y+ + +
Sbjct: 25 VIDALAEKWGTPLTNSKFNGMYTTVHRPEGKVLLVKPLTYMNLSGECVGPLMDYFDIEIE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ L G LRLR G GGHNG+KS++ + G +EF R+R+GI RPP M
Sbjct: 85 DLIVIYDDLDLETGKLRLRQKGSAGGHNGIKSLIQHL-GTQEFNRIRVGINRPPAGMKVA 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L KF+ + + A+ V ++ LSK + HFN
Sbjct: 144 DYVLAKFSKEDQVLMQDAIVNSVNAVEASLSKPFLDVMNHFNV 186
>gi|291540814|emb|CBL13925.1| peptidyl-tRNA hydrolase [Roseburia intestinalis XB6B4]
Length = 212
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 99/167 (59%), Gaps = 3/167 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PL 59
++DA AE IS++ KA G+G + V+LAKPQTYMNLSGES L YYK+ P
Sbjct: 45 VMDALAEKYNISISEKKHKALCGKGVINGVKVVLAKPQTYMNLSGESVAELVNYYKMDPE 104
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
++V +DD+ L G LR+R G GGHNG+K+++ G + F R+++G+G P D
Sbjct: 105 EEMIVIYDDISLAPGNLRIRKKGSAGGHNGIKNII-AMTGTQNFLRIKVGVGEKPAGWDL 163
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 166
+L F+ R ++ A+ VE +++++ G T++A + ++K
Sbjct: 164 ADHVLGHFDTADRAEVEKAIGHAVEAAEMMIT-GETDAAMNRYNVKK 209
>gi|255657459|ref|ZP_05402868.1| peptidyl-tRNA hydrolase [Clostridium difficile QCD-23m63]
gi|296449054|ref|ZP_06890844.1| aminoacyl-tRNA hydrolase [Clostridium difficile NAP08]
gi|296879877|ref|ZP_06903850.1| aminoacyl-tRNA hydrolase [Clostridium difficile NAP07]
gi|296262147|gb|EFH08952.1| aminoacyl-tRNA hydrolase [Clostridium difficile NAP08]
gi|296429166|gb|EFH15040.1| aminoacyl-tRNA hydrolase [Clostridium difficile NAP07]
Length = 186
Score = 119 bits (297), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 93/162 (57%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ IS+ + KA G+G VG VLL KPQTYMNLSGE+ + YYK+ L+
Sbjct: 25 VIDILAKEYNISVTKIKHKALIGEGRVGTEKVLLVKPQTYMNLSGETLIDIYKYYKVDLS 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ L G +R+R G G HNG+KS+ G+ +F R+R+G+ +P D
Sbjct: 85 NIVVVYDDIDLEVGKIRIRKKGSGGTHNGMKSITKCL-GSNDFPRVRVGVSKPEVGQDLA 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
F+L +F + I+ AL++ + ++ + + S +N
Sbjct: 144 DFVLSRFRKEESDNINEALEKAAYAIDSIIRENIDMSMNKYN 185
>gi|295093546|emb|CBK82637.1| peptidyl-tRNA hydrolase [Coprococcus sp. ART55/1]
Length = 185
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 93/162 (57%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D AE I ++T KA G+G + V+LA PQT+MNLSGES + +YK +
Sbjct: 25 VLDELAERHNIRIDTAKHKALIGKGIIDGEKVILAMPQTFMNLSGESVRAIMDFYKCTVE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ L G LR+R G GGHNG+K+++ + G++EF R+R+G+G+ P MD
Sbjct: 85 DLIVVYDDIDLDVGKLRIRQKGSAGGHNGMKNIIQHV-GSQEFVRIRVGVGKKPDHMDLA 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F I + + ++ +L+ G + FN
Sbjct: 144 DYVLSRFGKEDLANIRESCGNACDAVETILADGTVAAMNKFN 185
>gi|323485662|ref|ZP_08091000.1| peptidyl-tRNA hydrolase [Clostridium symbiosum WAL-14163]
gi|355624617|ref|ZP_09047811.1| peptidyl-tRNA hydrolase [Clostridium sp. 7_3_54FAA]
gi|323401012|gb|EGA93372.1| peptidyl-tRNA hydrolase [Clostridium symbiosum WAL-14163]
gi|354821779|gb|EHF06158.1| peptidyl-tRNA hydrolase [Clostridium sp. 7_3_54FAA]
Length = 202
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 93/161 (57%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D A+ I + KA G+G + V+L KPQTYMNLSGES + YYK +
Sbjct: 26 LDELADRYNIDVREKAHKALIGKGMIEGNKVILVKPQTYMNLSGESIRSVMDYYKTEPSE 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+V +DD+ L G +R+R G GGHNG+K+++ + G +EF R+RIG+G P +MD
Sbjct: 86 FIVIYDDISLEPGQIRIRKKGSAGGHNGIKNIIAHL-GTQEFPRIRIGVGEKPARMDLAD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F+ +ER++ A ++G +++ G+ + FN
Sbjct: 145 YVLGHFSKEEKERMEQAFKDGAAAAVAMMNDGVDTAMNRFN 185
>gi|163847223|ref|YP_001635267.1| peptidyl-tRNA hydrolase [Chloroflexus aurantiacus J-10-fl]
gi|222525064|ref|YP_002569535.1| peptidyl-tRNA hydrolase [Chloroflexus sp. Y-400-fl]
gi|189038282|sp|A9WBS1.1|PTH_CHLAA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783861|sp|B9LE93.1|PTH_CHLSY RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|163668512|gb|ABY34878.1| Aminoacyl-tRNA hydrolase [Chloroflexus aurantiacus J-10-fl]
gi|222448943|gb|ACM53209.1| Aminoacyl-tRNA hydrolase [Chloroflexus sp. Y-400-fl]
Length = 188
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 94/164 (57%), Gaps = 2/164 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PLN 60
+D AE G++ + +G + V+LAKPQTYMNLSG++ L +YK+ P
Sbjct: 26 VDTLAERHGLTFRPQRANSQLAEGNIYGQRVVLAKPQTYMNLSGQAVVALCNWYKIDPAR 85
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV +DD+ LP LR+R G G HNG++S++ G EF RLR+GIG+PPG+MD
Sbjct: 86 ELLVIYDDLDLPFAKLRIRERGSAGTHNGMRSIVAQL-GTTEFPRLRVGIGQPPGKMDAA 144
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTI 164
++L +F + L + ++++L +GLT + +N +
Sbjct: 145 DYVLGRFTPDEEAALPDLLGRIADAVEVILREGLTTAMNRYNPL 188
>gi|398309138|ref|ZP_10512612.1| peptidyl-tRNA hydrolase [Bacillus mojavensis RO-H-1]
Length = 188
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 87/162 (53%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID ++ I +N +G GFV VLL KP TYMNLSGE PL YY +
Sbjct: 26 IDQLSKEWNIELNQSKFNGLYGTGFVSGKKVLLVKPLTYMNLSGECLRPLMDYYDVDNED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+ V +DD+ LP G +RLR G GGHNG+KS++ + G EF R+RIGIGRP M
Sbjct: 86 LKVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQHL-GTPEFDRIRIGIGRPVNGMKVVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L F+ I+ A++ V+ + LSK E FN
Sbjct: 145 YVLGAFSKDEAPAIEEAIERSVKACEASLSKPFLEVMNEFNA 186
>gi|125975113|ref|YP_001039023.1| peptidyl-tRNA hydrolase [Clostridium thermocellum ATCC 27405]
gi|125715338|gb|ABN53830.1| peptidyl-tRNA hydrolase [Clostridium thermocellum ATCC 27405]
Length = 196
Score = 118 bits (296), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 101/161 (62%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
++ ++ I + + KA G G +G V+LAKPQT+MNLSGES + +YK+P+
Sbjct: 36 VEFLSKRHDIRLGKLKHKALIGDGEIGGRKVILAKPQTFMNLSGESVREIVEWYKIPVKN 95
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+++ +DD+ LP G LRLR G G HNG++SV+ + + EF R+RIGI +PP D +
Sbjct: 96 IIIIYDDIDLPVGKLRLRPKGSAGTHNGMRSVIYQLQ-SEEFPRIRIGIDKPPEGWDLIS 154
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F+A R++ID A+++ + ++ +L G+ + +N
Sbjct: 155 YVLSRFSADERKKIDEAVEKAADAVETILKSGIDSAMNKYN 195
>gi|331086146|ref|ZP_08335228.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 9_1_43BFAA]
gi|330406305|gb|EGG85819.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 192
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 2/166 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPL- 59
+ID E I+++T KA G+G + VLL KPQTYMNLSGES L YYK+
Sbjct: 25 VIDRLGEKYNIAVDTKKHKAYIGKGMIDGQKVLLVKPQTYMNLSGESVRELVEYYKVDAE 84
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
VLV +DD+ L G LR+R G GGHNG+K+++ + G + F R+++G+G P D
Sbjct: 85 EEVLVIYDDISLDVGQLRIRKKGSAGGHNGIKNIIAHL-GTQVFPRIKVGVGEKPKNYDL 143
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQ 165
++L F+ R +++ E ++L+L+ + + +N Q
Sbjct: 144 ADYVLGHFSKAERAQMEDGYDRATEAVRLILAGEIDAAMNQYNKKQ 189
>gi|218134567|ref|ZP_03463371.1| hypothetical protein BACPEC_02470 [[Bacteroides] pectinophilus ATCC
43243]
gi|217989952|gb|EEC55963.1| aminoacyl-tRNA hydrolase [[Bacteroides] pectinophilus ATCC 43243]
Length = 187
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 93/163 (57%), Gaps = 1/163 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A++ I+M+ K G+G +G VLL KPQT+MN SGE + YYK ++
Sbjct: 25 VIDELADAYNINMDMAKHKGICGKGMIGSNKVLLVKPQTFMNNSGECLREVLDYYKEDVD 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
VLV +DD+ L G LRLR G GGHNG+KS++ + G EF+R+R+G+G P D
Sbjct: 85 NVLVIYDDICLDVGRLRLRPKGSAGGHNGIKSIIAHL-GTEEFSRIRVGVGDKPKNYDLA 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L F + + + + V+ + ++L +G+ E FN
Sbjct: 144 DWVLGHFPKEQLDDVRAGIDKAVKAVPVVLDRGIEEGMNEFNA 186
>gi|226309688|ref|YP_002769582.1| peptidyl-tRNA hydrolase [Brevibacillus brevis NBRC 100599]
gi|254783855|sp|C0ZHD7.1|PTH_BREBN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226092636|dbj|BAH41078.1| peptidyl-tRNA hydrolase [Brevibacillus brevis NBRC 100599]
Length = 189
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 91/165 (55%), Gaps = 1/165 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID ++ GI + +A G+G + VLL KPQTYMNLSGES + +YKL +
Sbjct: 26 IDKISDKWGIPVTQNKFRALVGEGRIEGEKVLLVKPQTYMNLSGESVAEVLKFYKLIPDD 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DD+ LP G LRLR G GGHNG+KS++ + G +EF R+++GI RP
Sbjct: 86 LVVIYDDLDLPTGHLRLREKGSAGGHNGIKSMIQHL-GTQEFKRIKVGISRPEPGRSVSD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 166
++L F R I A+ + + + + HFN+++K
Sbjct: 145 YVLNTFPVAERADIQEAVSLAADACAMWTRESFLKVMNHFNSLKK 189
>gi|256003232|ref|ZP_05428224.1| peptidyl-tRNA hydrolase [Clostridium thermocellum DSM 2360]
gi|281418468|ref|ZP_06249487.1| peptidyl-tRNA hydrolase [Clostridium thermocellum JW20]
gi|385777599|ref|YP_005686764.1| peptidyl-tRNA hydrolase [Clostridium thermocellum DSM 1313]
gi|419722854|ref|ZP_14249991.1| Peptidyl-tRNA hydrolase [Clostridium thermocellum AD2]
gi|419726354|ref|ZP_14253377.1| Peptidyl-tRNA hydrolase [Clostridium thermocellum YS]
gi|255992923|gb|EEU03013.1| peptidyl-tRNA hydrolase [Clostridium thermocellum DSM 2360]
gi|281407552|gb|EFB37811.1| peptidyl-tRNA hydrolase [Clostridium thermocellum JW20]
gi|316939279|gb|ADU73313.1| peptidyl-tRNA hydrolase [Clostridium thermocellum DSM 1313]
gi|380770406|gb|EIC04303.1| Peptidyl-tRNA hydrolase [Clostridium thermocellum YS]
gi|380781234|gb|EIC10895.1| Peptidyl-tRNA hydrolase [Clostridium thermocellum AD2]
Length = 189
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 101/161 (62%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
++ ++ I + + KA G G +G V+LAKPQT+MNLSGES + +YK+P+
Sbjct: 29 VEFLSKRHDIRLGKLKHKALIGDGEIGGRKVILAKPQTFMNLSGESVREIVEWYKIPVKN 88
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+++ +DD+ LP G LRLR G G HNG++SV+ + + EF R+RIGI +PP D +
Sbjct: 89 IIIIYDDIDLPVGKLRLRPKGSAGTHNGMRSVIYQLQ-SEEFPRIRIGIDKPPEGWDLIS 147
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F+A R++ID A+++ + ++ +L G+ + +N
Sbjct: 148 YVLSRFSADERKKIDEAVEKAADAVETILKSGIDSAMNKYN 188
>gi|398817464|ref|ZP_10576082.1| peptidyl-tRNA hydrolase [Brevibacillus sp. BC25]
gi|398030018|gb|EJL23458.1| peptidyl-tRNA hydrolase [Brevibacillus sp. BC25]
Length = 189
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 91/165 (55%), Gaps = 1/165 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID ++ GI + +A G+G + VLL KPQTYMNLSGES + +YKL +
Sbjct: 26 IDKISDKWGIPVTQNKFRALVGEGRIEADKVLLVKPQTYMNLSGESVAEVLKFYKLIPDD 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DD+ LP G LRLR G GGHNG+KS++ + G +EF R+++GI RP
Sbjct: 86 LVVIYDDLDLPTGHLRLREKGSAGGHNGIKSMIQHL-GTQEFKRIKVGISRPESGRSVSD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 166
++L F R I A+ + + + + H+N+++K
Sbjct: 145 YVLNTFPVAERADIQEAVSLAADACAMWTRESFLKVMNHYNSLKK 189
>gi|295702291|ref|YP_003595366.1| peptidyl-tRNA hydrolase [Bacillus megaterium DSM 319]
gi|294799950|gb|ADF37016.1| peptidyl-tRNA hydrolase [Bacillus megaterium DSM 319]
Length = 185
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 89/161 (55%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID AE IS++ +G G + V+L KP TYMNLSGES PL Y+ + +
Sbjct: 26 IDKIAEQFMISLDKTKFNGIYGTGIIKGEKVILLKPLTYMNLSGESIRPLMDYFDIDVKD 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+LV +DD+ LPCG +RLR G GGHNG+KS++ + + +EF R+RIGI RP M
Sbjct: 86 LLVIYDDLDLPCGKVRLRTKGSPGGHNGIKSIIQHLK-TQEFNRIRIGIDRPKNGMKVVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F ++ A++ + + L K E +N
Sbjct: 145 YVLGRFTEDEMVHMEEAMKTSIHASEDFLGKPFLEVMNRYN 185
>gi|291535573|emb|CBL08685.1| peptidyl-tRNA hydrolase [Roseburia intestinalis M50/1]
Length = 212
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 99/167 (59%), Gaps = 3/167 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PL 59
++DA AE IS++ KA G+G + V+LAKPQTYMNLSGES L YYK+ P
Sbjct: 45 VMDALAEKYNISISEKKHKALCGKGVINGVKVVLAKPQTYMNLSGESVTELVNYYKMDPE 104
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
++V +DD+ L G LR+R G GGHNG+K+++ G + F R+++G+G P D
Sbjct: 105 EEMIVIYDDISLAPGNLRIRKKGSAGGHNGIKNII-AMTGTQNFLRIKVGVGEKPAGWDL 163
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 166
+L F+ R ++ A+ VE +++++ G T++A + ++K
Sbjct: 164 ADHVLGHFDTADRAEVEKAIGHAVEAAEMMIT-GETDAAMNRYNVKK 209
>gi|111225610|ref|YP_716404.1| peptidyl-tRNA hydrolase [Frankia alni ACN14a]
gi|123142574|sp|Q0RCD6.1|PTH_FRAAA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|111153142|emb|CAJ64889.1| Peptidyl-tRNA hydrolase (PTH) [Frankia alni ACN14a]
Length = 197
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 1/164 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D AE G + + +A + + +LA+P ++MNLSG + +YK+
Sbjct: 34 VVDLLAERAGSRLKSHRSRADVAEVRLAGTRAILARPLSFMNLSGGPVSAVRTFYKIDPA 93
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
RV+V HD++ +P G +RL+ GG GHNGL+S+ + G R++ R+R+GIGRPPG+MDP
Sbjct: 94 RVIVVHDELDIPFGSVRLKRGGGDNGHNGLRSISSAL-GTRDYLRVRVGIGRPPGRMDPA 152
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTI 164
++L+ F A R + L+ + +++L++ GL + ++ +
Sbjct: 153 DYVLRDFAAAERRELPLLLEHSADSVEMLITDGLEPTQNRYHAL 196
>gi|160878271|ref|YP_001557239.1| aminoacyl-tRNA hydrolase [Clostridium phytofermentans ISDg]
gi|189038285|sp|A9KR32.1|PTH_CLOPH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|160426937|gb|ABX40500.1| Aminoacyl-tRNA hydrolase [Clostridium phytofermentans ISDg]
Length = 191
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 92/161 (57%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
I A+ IS++T KA G+G +G V+LAKPQTYMNLSGES L +YK+
Sbjct: 26 ITRLADDNNISLDTKKHKAICGKGMIGGEKVILAKPQTYMNLSGESVRELIDFYKVTKEE 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DD+ L G LR+R G GGHNG+K+++ + G+ EF R++IG+G P D
Sbjct: 86 IIVIYDDISLDVGQLRIRTKGSAGGHNGIKNIIAHL-GSDEFCRIKIGVGDKPKNWDLAD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F I AL++ + + +L G + FN
Sbjct: 145 YVLARFPKEEEPAIREALEKVSKACETILRDGAKVAMNLFN 185
>gi|384263684|ref|YP_005419391.1| peptidyl-tRNA hydrolase SpoVC [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387896579|ref|YP_006326875.1| Peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens Y2]
gi|380497037|emb|CCG48075.1| peptidyl-tRNA hydrolase SpoVC [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387170689|gb|AFJ60150.1| Peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens Y2]
Length = 188
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 86/161 (53%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID ++ I +N +G GFV VLL KP TYMNLSGE PL YY
Sbjct: 26 IDELSKEWNIELNKTKFNGLYGMGFVSGKKVLLVKPLTYMNLSGECLRPLLDYYDADHED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+ V +DD+ LP G +RLR G GGHNG+KS++ + G EF R+RIGIGRP G M
Sbjct: 86 LKVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQHL-GTPEFDRVRIGIGRPAGGMKVVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F I+ A+ + V+ + L+K E FN
Sbjct: 145 YVLGAFTKEELPNINDAVSKTVKACEASLTKPFLEVMNEFN 185
>gi|225575739|ref|ZP_03784349.1| hypothetical protein RUMHYD_03832 [Blautia hydrogenotrophica DSM
10507]
gi|225037036|gb|EEG47282.1| aminoacyl-tRNA hydrolase [Blautia hydrogenotrophica DSM 10507]
Length = 194
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 93/165 (56%), Gaps = 2/165 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PLN 60
+D E + + V CK +G+G + V+L KP TYMNLSGES +A Y+K+ P +
Sbjct: 26 VDVLVEEYQVPQSGVRCKGMYGKGMIAGEKVILLKPLTYMNLSGESVRGIADYFKIDPES 85
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+++V +DD+ L G +R+R G GGHNG+K ++ G + F R++IG+G P D
Sbjct: 86 QLIVIYDDIDLEPGQIRIRKKGSAGGHNGIKDIIAKL-GTQNFIRIKIGVGAKPRGWDLA 144
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQ 165
+L +F+ RE ID A+ +K +L+ G+ + +N Q
Sbjct: 145 DHVLSRFSKEERELIDMAVSRAAAAVKKILTDGVDAAMNEYNRKQ 189
>gi|212637895|ref|YP_002314415.1| peptidyl-tRNA hydrolase SpoVC [Anoxybacillus flavithermus WK1]
gi|212559375|gb|ACJ32430.1| Peptidyl-tRNA hydrolase SpoVC [Anoxybacillus flavithermus WK1]
Length = 207
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 91/162 (56%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A G+S+N + F G + V+L KP TYMNLSGE PL YY + ++
Sbjct: 46 VIDELAHRWGLSLNQTKFQGIFTSGMISGEKVILCKPLTYMNLSGECVRPLMDYYNIDVD 105
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ L G +RLR G GGHNG+KS++++ + +F R+RIGI RP M
Sbjct: 106 DLIVIYDDLDLSTGTVRLRPKGSAGGHNGMKSLIHHLK-TEQFKRIRIGIDRPKNGMRVS 164
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L ++ A + +I+ A+Q+ + + L + FN
Sbjct: 165 DYVLGRWTAEEKIQIEQAIQKAADACERSLKISFAQVMNEFN 206
>gi|255281408|ref|ZP_05345963.1| aminoacyl-tRNA hydrolase [Bryantella formatexigens DSM 14469]
gi|255267896|gb|EET61101.1| aminoacyl-tRNA hydrolase [Marvinbryantia formatexigens DSM 14469]
Length = 191
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 96/162 (59%), Gaps = 2/162 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLP-LN 60
ID AE I + +A G G + VLL KP T+MNLSGES LA +YK+ +
Sbjct: 26 IDVLAEKYNIKVEYEKGRALTGSGRIEGQSVLLVKPLTFMNLSGESIRALADFYKIDGTS 85
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+++V +DD+ LP G LR+R G GGHNG+KS++++ G +EF R+++G+G P D
Sbjct: 86 QLIVIYDDISLPPGQLRIREKGSAGGHNGIKSIISHL-GGQEFLRIKVGVGEKPAGWDLA 144
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F+ R++++ AL+ + L++ G+ + +N
Sbjct: 145 DYVLSRFSQEERQKVEEALKRAADAAVCLMTDGVEAAMNEYN 186
>gi|57234607|ref|YP_181337.1| peptidyl-tRNA hydrolase [Dehalococcoides ethenogenes 195]
gi|119390932|sp|Q3Z8W2.1|PTH_DEHE1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|57225055|gb|AAW40112.1| peptidyl-tRNA hydrolase [Dehalococcoides ethenogenes 195]
Length = 189
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 91/162 (56%), Gaps = 4/162 (2%)
Query: 5 FAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLV 64
FA+ IS + C + G G + D ++LAKPQTYMNLSG++ L Y L ++V
Sbjct: 29 FAKDNHISFDKKCCLSRTGSGRINDEEIVLAKPQTYMNLSGKAASQLLRRYNLKAADIIV 88
Query: 65 FHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAF-- 122
DD+ LP G +RLR G GGHNG+ S++ + G +EF RL+IGIG+P + +
Sbjct: 89 VQDDLDLPAGKIRLRLGGSAGGHNGISSIITDI-GTKEFIRLKIGIGKPDSRNNGTEVVD 147
Query: 123 -LLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
+L F RE +D A+ E L LL+ GL ++ FN+
Sbjct: 148 HVLGNFGGEEREIMDKAITRASEALTCLLTFGLDTASNRFNS 189
>gi|313895642|ref|ZP_07829198.1| aminoacyl-tRNA hydrolase [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312975768|gb|EFR41227.1| aminoacyl-tRNA hydrolase [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 195
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++DA A+ G+S + + +G V L KPQTYMN SG + GP+ +YYK+
Sbjct: 25 LVDALAQRLGVSAWKKAFSSLVAEVRIGSEKVFLVKPQTYMNDSGSALGPMLSYYKIDTK 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V HDDM +P G +R+R GG GGHNG+KS++++ G EF R+RIGIGRPP
Sbjct: 85 DLIVVHDDMDIPAGAVRIRTKGGSGGHNGIKSIISHV-GTEEFPRVRIGIGRPPVGWTVI 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 166
+L F+ + A+ + ++ +++ G+ + FN +K
Sbjct: 144 NHVLAPFSTDDASLVGEAIGYLLPAVEYIVTDGVDMAMNRFNPRKK 189
>gi|424779781|ref|ZP_18206673.1| Peptidyl-tRNA hydrolase [Catellicoccus marimammalium M35/04/3]
gi|422843531|gb|EKU27961.1| Peptidyl-tRNA hydrolase [Catellicoccus marimammalium M35/04/3]
Length = 193
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 86/147 (58%), Gaps = 2/147 (1%)
Query: 1 MIDAFAESQGISMNTVHC-KATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPL 59
++D A+ +GIS ++ K +LL KP TYMNLSGES + +YK+PL
Sbjct: 25 VLDELAKKKGISFHSDRAFKGEIASFSEQGEKILLLKPSTYMNLSGESVRAVVDFYKIPL 84
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
+++ HDD+ LPCG LR R +G GGHNGLKS+ N G ++F RL+IGIGRP
Sbjct: 85 EDIMIVHDDLDLPCGSLRFRASGSAGGHNGLKSIFQNC-GTQKFLRLKIGIGRPHPGKTV 143
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVL 146
+L F+ R I+ A+Q GVE L
Sbjct: 144 VYHVLHPFSKEERMEIEFAIQNGVEAL 170
>gi|320529007|ref|ZP_08030099.1| peptidyl-tRNA hydrolase [Selenomonas artemidis F0399]
gi|320138637|gb|EFW30527.1| peptidyl-tRNA hydrolase [Selenomonas artemidis F0399]
Length = 195
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++DA A+ G+S + + +G V L KPQTYMN SG + GP+ +YYK+
Sbjct: 25 LVDALAQRLGVSAWKKAFSSLVAEVRIGSEKVFLVKPQTYMNDSGSALGPMLSYYKIDTK 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V HDDM +P G +R+R GG GGHNG+KS++++ G EF R+RIGIGRPP
Sbjct: 85 DLIVVHDDMDIPAGAVRIRTKGGSGGHNGIKSIISHV-GTEEFPRVRIGIGRPPVGWTVI 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 166
+L F+ + A+ + ++ +++ G+ + FN +K
Sbjct: 144 NHVLAPFSTDDASLVGEAIGYLLPAVEYIVTDGVDMAMNRFNPRKK 189
>gi|170755332|ref|YP_001783180.1| peptidyl-tRNA hydrolase [Clostridium botulinum B1 str. Okra]
gi|429244323|ref|ZP_19207788.1| peptidyl-tRNA hydrolase [Clostridium botulinum CFSAN001628]
gi|229470295|sp|B1IGZ7.1|PTH_CLOBK RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|169120544|gb|ACA44380.1| peptidyl-tRNA hydrolase [Clostridium botulinum B1 str. Okra]
gi|428758644|gb|EKX81051.1| peptidyl-tRNA hydrolase [Clostridium botulinum CFSAN001628]
Length = 189
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 96/165 (58%), Gaps = 3/165 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D AE I +N K ++G+G +G+ ++L KP TYMNLSGES A +YK+
Sbjct: 25 VVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLKPSTYMNLSGESVIEAANFYKIDKE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DDM + G LR+R G GGHNG+K+++ + + F R+R+GIG+P +
Sbjct: 85 NIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQHLNSDI-FPRVRVGIGQPDENV--V 141
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQ 165
++L KF+ RE ID L + ++ G+TE+ +N ++
Sbjct: 142 NYVLGKFSKDQREIIDKVLAMSAKACISIVEDGVTEAMNKYNGVK 186
>gi|357057647|ref|ZP_09118505.1| peptidyl-tRNA hydrolase [Selenomonas infelix ATCC 43532]
gi|355374895|gb|EHG22186.1| peptidyl-tRNA hydrolase [Selenomonas infelix ATCC 43532]
Length = 208
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 94/164 (57%), Gaps = 5/164 (3%)
Query: 7 ESQGISMNTVHCKATFGQGF----VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRV 62
ES + +N K F +G V L KP TYMN SGE+ GP+ +YYK+ + +
Sbjct: 27 ESLAVRLNAPAWKEDFFSAITEVRIGGEKVFLVKPLTYMNNSGEALGPMLSYYKIDADEL 86
Query: 63 LVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAF 122
+V HDDM +P G +R+R GG GGHNG+KS++ + G+ +FAR+RIGIGRPP
Sbjct: 87 VVVHDDMDIPAGTVRIRKKGGSGGHNGIKSILAHV-GSEDFARVRIGIGRPPAGWTVINH 145
Query: 123 LLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 166
+L F A +I TA+ + ++ +++ G+ + +N +K
Sbjct: 146 VLAPFAAEDVSKIRTAIDYLLPAVECIVTDGVDLAMNKYNPHKK 189
>gi|325662343|ref|ZP_08150952.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 4_1_37FAA]
gi|325471345|gb|EGC74568.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 4_1_37FAA]
Length = 192
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 93/166 (56%), Gaps = 2/166 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPL- 59
+ID E I+++T KA G+G + V+L KPQTYMNLSGES L YYK+
Sbjct: 25 VIDRLGEKYNIAVDTKKHKAYIGKGMIDGQKVILVKPQTYMNLSGESVRELVDYYKVDAE 84
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
VLV +DD+ L G LR+R G GGHNG+K+++ + G + F R+++G+G P D
Sbjct: 85 EEVLVIYDDISLDVGQLRIRKKGSAGGHNGIKNIIAHL-GTQVFPRIKVGVGEKPKNYDL 143
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQ 165
++L F+ R +++ E ++L+L+ + + +N Q
Sbjct: 144 ADYVLGHFSKAERAQMEEGYDRATEAVRLILAGEIDAAMNQYNKKQ 189
>gi|270307957|ref|YP_003330015.1| peptidyl-tRNA hydrolase [Dehalococcoides sp. VS]
gi|270153849|gb|ACZ61687.1| peptidyl-tRNA hydrolase [Dehalococcoides sp. VS]
Length = 189
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 92/162 (56%), Gaps = 4/162 (2%)
Query: 5 FAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLV 64
FA+ IS++ C + G G + D ++LAKPQTYMNLSG++ L Y L ++V
Sbjct: 29 FAKDNHISLDKKCCLSRTGSGRINDEEIVLAKPQTYMNLSGKAASQLLRRYNLKAADIIV 88
Query: 65 FHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAF-- 122
DD+ LP G +RLR G GGHNG+ S++ + G +EF RL+IGIG+P + +
Sbjct: 89 VQDDLDLPAGKIRLRLGGSAGGHNGISSIITDI-GTKEFIRLKIGIGKPDSRNNGTEVVD 147
Query: 123 -LLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
+L F RE ++ A+ E L LL+ GL ++ FN+
Sbjct: 148 HVLGNFGGEEREIMEKAITRASEALTCLLTCGLDTASNRFNS 189
>gi|402303199|ref|ZP_10822296.1| aminoacyl-tRNA hydrolase [Selenomonas sp. FOBRC9]
gi|400379134|gb|EJP31982.1| aminoacyl-tRNA hydrolase [Selenomonas sp. FOBRC9]
Length = 195
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 1/166 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++DA A+ G+S + +G V L KPQTYMN SG + GP+ +YYK+
Sbjct: 25 LVDALAQRLGVSAWKEAFSSLVAAVRIGSEKVFLVKPQTYMNDSGSALGPMLSYYKIDTK 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V HDDM +P G +R+R GG GGHNG+KS++++ G EF R+RIGIGRPP
Sbjct: 85 DLIVVHDDMDIPAGAVRIRTKGGSGGHNGIKSIISHV-GTEEFPRVRIGIGRPPVGWTVI 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 166
+L F+ + A+ + ++ L++ G+ + FN +K
Sbjct: 144 NHVLTPFSTDDASLVGEAIGYLLPAVEYLVTDGVDMAMNRFNPRKK 189
>gi|304436451|ref|ZP_07396425.1| aminoacyl-tRNA hydrolase [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304370497|gb|EFM24148.1| aminoacyl-tRNA hydrolase [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 208
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 94/168 (55%), Gaps = 1/168 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+IDA AE +S + ++ + +G + L KP TYMN SGE+ GP+ +YYKL
Sbjct: 25 LIDALAEHLNVSAWKEYFSSSVAEARIGGEKIFLVKPLTYMNNSGEAIGPMLSYYKLSSE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V HDDM +P G +R+R G GGHNG+KS++++ G+ FAR+RIGIGRPP
Sbjct: 85 DLIVVHDDMDIPVGTVRIRKKGSSGGHNGIKSILSHV-GSEAFARVRIGIGRPPAGWTVI 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYK 168
+L F +I A+ + + +++ G + +N +K K
Sbjct: 144 NHVLAPFAPEDTPKIREAIAYLLPAVTCIVTDGTDFAMNRYNPHRKKK 191
>gi|374294798|ref|YP_005044989.1| peptidyl-tRNA hydrolase [Clostridium clariflavum DSM 19732]
gi|359824292|gb|AEV67065.1| peptidyl-tRNA hydrolase [Clostridium clariflavum DSM 19732]
Length = 203
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 101/162 (62%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID ++ I++ V KA G G +G VLL KPQT+MNLSGES + +YK+P+
Sbjct: 42 IDRLSKKHNIAVTKVKYKAVIGDGNIGGHRVLLVKPQTFMNLSGESVREIIEWYKVPVKN 101
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+++ +DD+ LP G +R+R G G HNG++SV+ + + +F R+RIGI +PP +
Sbjct: 102 IIIIYDDIDLPVGKIRIRPKGSAGTHNGMRSVIYQIQ-SEDFPRIRIGIDKPPQGWELAD 160
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
F+L KF+A R+ ++ A++ + ++++L+ G+ ++ +N
Sbjct: 161 FVLSKFSADERKSVEEAIENAADAVEVILNSGIDKAMNRYNN 202
>gi|89100523|ref|ZP_01173384.1| peptidyl-tRNA hydrolase [Bacillus sp. NRRL B-14911]
gi|89084789|gb|EAR63929.1| peptidyl-tRNA hydrolase [Bacillus sp. NRRL B-14911]
Length = 187
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 87/162 (53%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID + I ++ K FG G V V L KP TYMNLSGES PL YY +
Sbjct: 25 VIDRLSGKLNIPLDQAKFKGVFGMGRVDGEKVFLLKPLTYMNLSGESIRPLMDYYDIDTE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+ V +DD+ LP G +RLR G GGHNG+KS + + G +EF+R+R+GIGRP G M
Sbjct: 85 DLAVIYDDLDLPPGKIRLRQKGSAGGHNGIKSTIAH-TGTQEFSRIRVGIGRPEGGMKVT 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F A ++ +D A + + K E +N
Sbjct: 144 DYVLGRFTAEEQKVMDEAADRSADACIDWIRKPFLEVMNQYN 185
>gi|392946237|ref|ZP_10311879.1| peptidyl-tRNA hydrolase [Frankia sp. QA3]
gi|392289531|gb|EIV95555.1| peptidyl-tRNA hydrolase [Frankia sp. QA3]
Length = 197
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 96/164 (58%), Gaps = 1/164 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D AE G + + +A + + +LA+P ++MNLSG + +YK+
Sbjct: 34 VVDLLAERAGSRLKSHRSRADVAEVRLAGERAVLARPLSFMNLSGGPVSAVRTFYKIDPA 93
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
RV+V HD++ +P G +RL+ GG GHNGL+S+ + G R++ R+R+GIGRPPG++DP
Sbjct: 94 RVIVVHDELDIPFGAVRLKRGGGDNGHNGLRSISSAL-GTRDYLRVRVGIGRPPGRLDPA 152
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTI 164
F+L+ F R + L+ + +++L++ GL + ++ +
Sbjct: 153 DFVLRDFGTAERRELPLLLEHAADSVEMLITDGLEPTQNRYHAL 196
>gi|440785115|ref|ZP_20962065.1| peptidyl-tRNA hydrolase [Clostridium pasteurianum DSM 525]
gi|440218487|gb|ELP57707.1| peptidyl-tRNA hydrolase [Clostridium pasteurianum DSM 525]
Length = 187
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 97/165 (58%), Gaps = 3/165 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D + I MN + K +G+G + + V+ KP T+MNLSGES + A+YK+P
Sbjct: 25 VLDLLCDKYNIDMNRIKFKGMYGEGKIENEKVIFLKPMTFMNLSGESVKEVCAFYKIPNK 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ L G +R+R +G GGHNG+K+++ N + F+R++IG+G P G D
Sbjct: 85 NIIVIYDDISLDIGRMRIRKSGSAGGHNGIKNIIFNLSTDI-FSRIKIGVGEPKG--DLV 141
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQ 165
+ +L KF+ R ++ V+ + +++ G+ E+ FN ++
Sbjct: 142 SHVLGKFSEDDRLEVEKVFNAAVKAINCIITDGVYEAMNSFNGLK 186
>gi|148381480|ref|YP_001256021.1| peptidyl-tRNA hydrolase [Clostridium botulinum A str. ATCC 3502]
gi|153931979|ref|YP_001385855.1| peptidyl-tRNA hydrolase [Clostridium botulinum A str. ATCC 19397]
gi|153936610|ref|YP_001389262.1| peptidyl-tRNA hydrolase [Clostridium botulinum A str. Hall]
gi|166199325|sp|A7FPJ7.1|PTH_CLOB1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166199326|sp|A5I7R5.1|PTH_CLOBH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|148290964|emb|CAL85100.1| peptidyl-tRNA hydrolase [Clostridium botulinum A str. ATCC 3502]
gi|152928023|gb|ABS33523.1| peptidyl-tRNA hydrolase [Clostridium botulinum A str. ATCC 19397]
gi|152932524|gb|ABS38023.1| aminoacyl-tRNA hydrolase [Clostridium botulinum A str. Hall]
Length = 189
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 96/165 (58%), Gaps = 3/165 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D AE I +N K ++G+G +G+ ++L KP TYMNLSGES A +YK+
Sbjct: 25 VVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLKPSTYMNLSGESVIEAANFYKIDKE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DDM + G LR+R G GGHNG+K+++ + + F R+R+GIG+P +
Sbjct: 85 NIIVIYDDMSIDIGKLRVRSKGSAGGHNGIKNIIQHLNSDI-FPRVRVGIGQPDENV--V 141
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQ 165
++L KF+ RE I+ L + ++ G+TE+ +N ++
Sbjct: 142 NYVLGKFSKDEREIIEKVLAMSAKACISIVEDGVTEAMNKYNGVK 186
>gi|172056087|ref|YP_001812547.1| peptidyl-tRNA hydrolase [Exiguobacterium sibiricum 255-15]
gi|229576703|sp|B1YGP7.1|PTH_EXIS2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|171988608|gb|ACB59530.1| Aminoacyl-tRNA hydrolase [Exiguobacterium sibiricum 255-15]
Length = 185
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 84/144 (58%), Gaps = 1/144 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
IDA A+ GI + KA FG G + V+L KP TYMNLSGE+ PL +YK+ +
Sbjct: 26 IDALAKEHGIKLTESKFKAVFGTGMIKGERVVLVKPLTYMNLSGEAVRPLLDFYKIAVED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
VLV +DD+ LP +RLR G GGHNG+KS++ + G ++ RL++G+GRPP +
Sbjct: 86 VLVIYDDLDLPLEKMRLRSKGSAGGHNGVKSLIQHL-GTQDIKRLKLGVGRPPAPIQVID 144
Query: 122 FLLQKFNAIARERIDTALQEGVEV 145
++L F + + L + V +
Sbjct: 145 WVLMPFAKSEQTTLQHVLSDSVNI 168
>gi|229136898|ref|ZP_04265526.1| Peptidyl-tRNA hydrolase [Bacillus cereus BDRD-ST26]
gi|228646563|gb|EEL02769.1| Peptidyl-tRNA hydrolase [Bacillus cereus BDRD-ST26]
Length = 177
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 81/136 (59%), Gaps = 12/136 (8%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ IS+N K FG GFV V+L KP TYMNLSGES PL YYK+ +
Sbjct: 47 IDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVED 106
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+V +DD+ +P G LRLR G GGHNG+KS +++ G +EF R+R+GI RP
Sbjct: 107 FVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRP-------- 157
Query: 122 FLLQKFNAIARERIDT 137
+K+N +R RI T
Sbjct: 158 ---KKWNEGSRLRIRT 170
>gi|269797672|ref|YP_003311572.1| peptidyl-tRNA hydrolase [Veillonella parvula DSM 2008]
gi|269094301|gb|ACZ24292.1| peptidyl-tRNA hydrolase [Veillonella parvula DSM 2008]
Length = 192
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 92/162 (56%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+IDA A+S + +A V VLL KPQT+MNLSGES GPL YYK+ +
Sbjct: 25 VIDAIADSAPHTPWREEQRAEVCSITVDGEKVLLVKPQTFMNLSGESVGPLMRYYKIDPS 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V +DDM LP G LR+R NG GGHNG+KS++++ G F R R+GIGRP Q
Sbjct: 85 DVYCIYDDMDLPIGKLRIRPNGSSGGHNGIKSLISHI-GTENFPRFRVGIGRPLPQWTVI 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+L F+ ++E++ +++ V+ + L G+ + FN
Sbjct: 144 DHVLAPFSEESQEKVQKGIKDTVKAVLGTLEVGIDKGMNQFN 185
>gi|134297988|ref|YP_001111484.1| aminoacyl-tRNA hydrolase [Desulfotomaculum reducens MI-1]
gi|172044208|sp|A4J0Q6.1|PTH_DESRM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|134050688|gb|ABO48659.1| peptidyl-tRNA hydrolase [Desulfotomaculum reducens MI-1]
Length = 206
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 91/154 (59%), Gaps = 5/154 (3%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ +S KA Q +G V+LAKPQTYMNLSG+S L +YKL +
Sbjct: 25 VIDRLADESRVSTEKNQHKAQICQITIGSEKVILAKPQTYMNLSGQSVVALMNWYKLSPD 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPP-GQMDP 119
+ V DDM LP GVLR+R NG GG GLK+++ G ++F R+R+GIGRP G +D
Sbjct: 85 ELFVITDDMDLPPGVLRIRKNGSAGGQRGLKNII-ELLGTQQFPRMRVGIGRPEHGAVD- 142
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 153
+L K + E I+ A+Q VE +K+ + +G
Sbjct: 143 --HVLGKISEAEAELINPAIQTAVEAVKVWVLEG 174
>gi|403382802|ref|ZP_10924859.1| peptidyl-tRNA hydrolase [Paenibacillus sp. JC66]
Length = 187
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 88/161 (54%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A GI ++ CKA G+G V V L KPQTYMNLSGES YYK+ L
Sbjct: 26 IDQIAREWGIDVSQKKCKALIGEGNVRGTKVWLIKPQTYMNLSGESLRAFLDYYKIELEN 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+ V +DD+ P G RLR+ GG GGHNG+KS++ + G + F R+RIGI RP +
Sbjct: 86 ITVLYDDLDTPFGKFRLRYQGGAGGHNGIKSIIQH-TGTQVFNRIRIGISRPAPGYNIAD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F+ + + L++ + +K L ++ FN
Sbjct: 145 YVLSPFSKEEFQSLPEVLEQIQKAVKYDLEHTFEQTMAAFN 185
>gi|332981375|ref|YP_004462816.1| peptidyl-tRNA hydrolase [Mahella australiensis 50-1 BON]
gi|332699053|gb|AEE95994.1| peptidyl-tRNA hydrolase [Mahella australiensis 50-1 BON]
Length = 188
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 94/162 (58%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ GI +N + KA +G+ ++G V+LAKPQT+MN SGES + Y+K PL
Sbjct: 25 VIDILAQRNGIKLNKLDYKALWGEAWIGAEKVILAKPQTFMNASGESVYDIVRYFKPPLE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ LP G +R+R G G HNG++S++ + F R+R+GI RP MD
Sbjct: 85 HLIVIYDDIDLPLGRIRIRTKGSAGTHNGMRSIIYMLDSD-AFPRIRVGIDRPGPGMDLV 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F+ + I A++ + + ++ G+ + +N
Sbjct: 144 NYVLSGFDEQEQPIIYKAMERAADAAEAIVKDGIEIAMSKYN 185
>gi|121534877|ref|ZP_01666696.1| Aminoacyl-tRNA hydrolase [Thermosinus carboxydivorans Nor1]
gi|121306476|gb|EAX47399.1| Aminoacyl-tRNA hydrolase [Thermosinus carboxydivorans Nor1]
Length = 185
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 89/162 (54%), Gaps = 2/162 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A G+S +A + + G VLL KPQTYMNLSG + G +A +YKL
Sbjct: 25 VVDELARRWGVSDWRRRHEAEVAE-YRGAEAVLLVKPQTYMNLSGRAVGEIARWYKLAAE 83
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V DD+ LP G LRLR G GGH G++S++ G FAR+R+GIGRPP
Sbjct: 84 DIIVVFDDLDLPVGRLRLRMKGSSGGHRGIESILAQL-GADTFARVRVGIGRPPQGWATA 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L KF I+ A+ + ++ +L GL ++ FN
Sbjct: 143 DYVLSKFTPDEAPLIEQAIVRAADAVETILKDGLNKAMNAFN 184
>gi|309789598|ref|ZP_07684179.1| aminoacyl-tRNA hydrolase [Oscillochloris trichoides DG-6]
gi|308228334|gb|EFO81981.1| aminoacyl-tRNA hydrolase [Oscillochloris trichoides DG6]
Length = 189
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 90/163 (55%), Gaps = 2/163 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PLN 60
+DA A+ G+ T + +G + V LAKPQTYMN SG + L ++YK+ P
Sbjct: 26 LDALAKRHGLEFRTKRANSLVAEGSIAGQRVALAKPQTYMNESGRAVSALRSWYKIEPAQ 85
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV +DD+ LP LRLR G G HNG++S++ G+ F RLR+GI +PPG+MD
Sbjct: 86 DLLVIYDDLDLPFARLRLRERGSSGTHNGMRSIVAQL-GSNAFPRLRVGIDQPPGKMDAA 144
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
A++L +FN +I + +++L G+ + +N
Sbjct: 145 AYVLSRFNKEEEAQIPDLCDRVADAAEVVLRDGVIAAMNRYNA 187
>gi|375087627|ref|ZP_09733973.1| peptidyl-tRNA hydrolase [Dolosigranulum pigrum ATCC 51524]
gi|374563903|gb|EHR35207.1| peptidyl-tRNA hydrolase [Dolosigranulum pigrum ATCC 51524]
Length = 186
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 87/148 (58%), Gaps = 1/148 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A GI++N ++T+G+ +G V+L KPQT+MN SG S P YY L +
Sbjct: 26 IDELAHQLGITLNKSKFESTYGEARIGTEKVILIKPQTFMNNSGRSVRPWLDYYDLSTDD 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
VLV +DD+ LP G +RLR GG GGHNG+KS++ N+ ++ F R++IGIGRP + +
Sbjct: 86 VLVIYDDLDLPVGKVRLREAGGSGGHNGIKSII-NYLSSKTFNRIKIGIGRPYAEQTVIS 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLL 149
++ F + + A++ V+ +
Sbjct: 145 HVMSTFPKETHDDMLVAVRSAVDATRFW 172
>gi|302342166|ref|YP_003806695.1| peptidyl-tRNA hydrolase [Desulfarculus baarsii DSM 2075]
gi|301638779|gb|ADK84101.1| peptidyl-tRNA hydrolase [Desulfarculus baarsii DSM 2075]
Length = 200
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 95/162 (58%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+++ A G+ + ++ +G+G V PV+ A PQTYMNLSGE+ L +YY+LP
Sbjct: 35 VVEELARRHGVGLVKSGHQSIWGKGLVEGRPVIAALPQTYMNLSGEAVAALLSYYRLPPT 94
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+++V HDD+ L G L++ GG GH G+ S++ + G EFARLR G+GRP +
Sbjct: 95 QLVVAHDDLDLELGRLKVAARGGAAGHKGVGSII-SLLGTDEFARLRFGVGRPRHDEPIE 153
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
F+L F A RE +Q + L+++L KGL E+ + F+
Sbjct: 154 QFVLNGFYADQRELGQKMVQVAADCLEVILGKGLAEAMQRFH 195
>gi|426404603|ref|YP_007023574.1| peptidyl-tRNA hydrolase [Bdellovibrio bacteriovorus str. Tiberius]
gi|425861271|gb|AFY02307.1| peptidyl-tRNA hydrolase [Bdellovibrio bacteriovorus str. Tiberius]
Length = 187
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 95/163 (58%), Gaps = 2/163 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D E G KA QG + D PV+ KPQT+MNLSGES PL +YK+PL R
Sbjct: 26 VDYLMEGLGNPPIKNQFKAEIAQGKIKDHPVIFCKPQTFMNLSGESVQPLMGFYKIPLER 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP-K 120
++V HD++ P ++++ N GHGGHNG+KSV + G+ ++ RLR+G+GRP P
Sbjct: 86 LIVIHDEIDQPFAQMKIQKNRGHGGHNGIKSV-SGLMGSMDYTRLRLGVGRPANPNIPVP 144
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L KF ++ L + + ++ ++ G+ +++ FNT
Sbjct: 145 DYVLGKFTKEEFAQMPDFLNKAGDAVESIILDGIQKASTKFNT 187
>gi|433649773|ref|YP_007294775.1| peptidyl-tRNA hydrolase [Mycobacterium smegmatis JS623]
gi|433299550|gb|AGB25370.1| peptidyl-tRNA hydrolase [Mycobacterium smegmatis JS623]
Length = 192
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 94/154 (61%), Gaps = 6/154 (3%)
Query: 16 VHCK--ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPC 73
VH K A G +G V+LAKP+ YMN SG GPLA +Y +P ++V HD++ +
Sbjct: 42 VHKKSGAEVATGRLGGQSVVLAKPRCYMNESGRQVGPLAKFYSVPPADIVVIHDELDIDF 101
Query: 74 GVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARE 133
G +RL+ GG GHNGL+SV ++ G +F R+RIGIGRPPG+M+ AF+L F
Sbjct: 102 GRIRLKFGGGVAGHNGLRSVGSSL-GTNDFQRVRIGIGRPPGRMEGAAFVLGNFTNAEWR 160
Query: 134 RIDTALQEGVEVLKLLLSKGLTESARHFNTIQKY 167
+ T ++ + +LL+S+GL E A+ NT+ +
Sbjct: 161 EVPTICEQAADATELLVSQGL-EPAQ--NTVHAW 191
>gi|294791582|ref|ZP_06756730.1| aminoacyl-tRNA hydrolase [Veillonella sp. 6_1_27]
gi|294456812|gb|EFG25174.1| aminoacyl-tRNA hydrolase [Veillonella sp. 6_1_27]
Length = 192
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 92/162 (56%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+IDA A+S + +A V VLL KPQT+MNLSGES GPL YYK+ +
Sbjct: 25 VIDAIADSVPHTPWREEQRAEVCSITVDGEKVLLVKPQTFMNLSGESVGPLMRYYKIDPS 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V +DDM LP G LR+R NG GGHNG+KS++++ G F R R+GIGRP Q
Sbjct: 85 DVYCIYDDMDLPIGKLRIRPNGSSGGHNGIKSLISHI-GTENFPRFRVGIGRPLPQWTVI 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+L F+ ++E++ +++ V+ + L G+ + FN
Sbjct: 144 DHVLAPFSEESQEKVQKGIKDTVKAVLGTLEVGIDKGMNQFN 185
>gi|225387032|ref|ZP_03756796.1| hypothetical protein CLOSTASPAR_00782 [Clostridium asparagiforme
DSM 15981]
gi|225046850|gb|EEG57096.1| hypothetical protein CLOSTASPAR_00782 [Clostridium asparagiforme
DSM 15981]
Length = 212
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 97/162 (59%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ S++ K +G+ +G V+L KPQT+MNLSGES A +YK+ +
Sbjct: 46 VIDVLADRLFTSVDEKKFKGYYGKAVIGGEKVILLKPQTFMNLSGESVRAAADFYKVDPD 105
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ L G LR+R G GGHNG+K+++ + G +EF R+++G+G P +MD
Sbjct: 106 HIIVVYDDVSLDVGQLRIRTKGSAGGHNGIKNIIAHL-GTQEFPRIKVGVGNKPPRMDLA 164
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F R ++ A +E E +++++ +G + FN
Sbjct: 165 DYVLGRFPREERGLMEDAFKEAAEAVEVMIQEGAGTAMNRFN 206
>gi|282848944|ref|ZP_06258333.1| aminoacyl-tRNA hydrolase [Veillonella parvula ATCC 17745]
gi|294793436|ref|ZP_06758573.1| aminoacyl-tRNA hydrolase [Veillonella sp. 3_1_44]
gi|416998853|ref|ZP_11939522.1| aminoacyl-tRNA hydrolase [Veillonella parvula ACS-068-V-Sch12]
gi|282581219|gb|EFB86613.1| aminoacyl-tRNA hydrolase [Veillonella parvula ATCC 17745]
gi|294455006|gb|EFG23378.1| aminoacyl-tRNA hydrolase [Veillonella sp. 3_1_44]
gi|333977006|gb|EGL77865.1| aminoacyl-tRNA hydrolase [Veillonella parvula ACS-068-V-Sch12]
Length = 192
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 92/162 (56%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+IDA A+S + +A V VLL KPQT+MNLSGES GPL YYK+ +
Sbjct: 25 VIDAIADSVPHTPWREEQRAEVCSITVDGEKVLLVKPQTFMNLSGESVGPLMRYYKIDPS 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V +DDM LP G LR+R NG GGHNG+KS++++ G F R R+GIGRP Q
Sbjct: 85 DVYCIYDDMDLPIGKLRIRPNGSSGGHNGIKSLISHI-GTENFPRFRVGIGRPLPQWTVI 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+L F+ ++E++ +++ V+ + L G+ + FN
Sbjct: 144 DHVLAPFSEESQEKVQKGIKDTVKAVLGTLEVGIDKGMNQFN 185
>gi|27262436|gb|AAN87499.1| Peptidyl-tRNA hydrolase [Heliobacillus mobilis]
Length = 190
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 93/166 (56%), Gaps = 1/166 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D AE G + +F + +G V L KPQTYMNLSG++ +AA+YKL
Sbjct: 25 VVDQLAERWGHDGFKAKFQGSFSEVRLGGQKVFLLKPQTYMNLSGQAASAMAAFYKLAPE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV +DD+ LP G LR R G GGHNG+KS++ G+ F RL++GIGRP +
Sbjct: 85 DILVVYDDLDLPPGKLRGRTKGSSGGHNGIKSLIACL-GSENFPRLKLGIGRPASRQPSA 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 166
+++L+ F A I A+ + ++L L +G+ E FN +K
Sbjct: 144 SYVLESFRAEELADIQKAIDLACDAVELWLERGMIEVMNRFNGGEK 189
>gi|424835857|ref|ZP_18260516.1| peptidyl-tRNA hydrolase [Clostridium sporogenes PA 3679]
gi|365977727|gb|EHN13825.1| peptidyl-tRNA hydrolase [Clostridium sporogenes PA 3679]
Length = 189
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 95/164 (57%), Gaps = 3/164 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID +E I +N K ++G+G +G+ V+L KP TYMNLSGES +YK+
Sbjct: 26 IDIISEKYNIKINRQKFKGSYGEGRIGNEKVILLKPSTYMNLSGESVIEAVNFYKINKEN 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DDM + G LR+R G GGHNG+K+++ + + F R+R+GIG+P G +
Sbjct: 86 IIVIYDDMSIDIGKLRIRGKGSAGGHNGIKNIIQHLNSDI-FPRVRVGIGQPDGNV--VN 142
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQ 165
++L KF+ RE I+ L + ++ G+TE+ +N ++
Sbjct: 143 YVLGKFSKEQREIIEKTLAMSAKACISIVEDGVTEAMNKYNGVK 186
>gi|167629343|ref|YP_001679842.1| peptidyl-tRNA hydrolase [Heliobacterium modesticaldum Ice1]
gi|167592083|gb|ABZ83831.1| peptidyl-tRNA hydrolase [Heliobacterium modesticaldum Ice1]
Length = 225
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 87/163 (53%), Gaps = 1/163 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D AE+ G + + V VLL KPQTYMNLSG+S LA +YKL
Sbjct: 52 VVDRLAEAWGAEGFRDRFQGLCSEARVEGEKVLLLKPQTYMNLSGQSVAALAVFYKLLPE 111
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV +DDM L G LR R GG GGHNG+KS++ G F RL++GIGRP +
Sbjct: 112 DILVIYDDMDLKLGRLRARAKGGSGGHNGMKSII-GLLGTEAFPRLKMGIGRPADRRLAA 170
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
A +L+ F +E + L +G E L + KG+ E FN
Sbjct: 171 AHVLESFTEEEQETVRAMLDQGREAAALWVDKGIIEVMNRFNA 213
>gi|387819821|ref|YP_005680168.1| peptidyl-tRNA hydrolase [Clostridium botulinum H04402 065]
gi|322807865|emb|CBZ05440.1| peptidyl-tRNA hydrolase [Clostridium botulinum H04402 065]
Length = 189
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 96/165 (58%), Gaps = 3/165 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D AE I +N K ++G+G +G+ ++L KP TYMNLSGES A +YK+
Sbjct: 25 VVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLKPSTYMNLSGESVIEAANFYKIDKE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DDM + G LR+R G GGHNG+K+++ + + F R+R+GIG+P +
Sbjct: 85 NIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQHLNSDI-FPRVRVGIGQPDENV--V 141
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQ 165
++L KF+ RE I+ L + ++ G+TE+ +N ++
Sbjct: 142 NYVLGKFSKDEREIIEKVLSMSAKACISIVEDGVTEAMNKYNGVK 186
>gi|226323671|ref|ZP_03799189.1| hypothetical protein COPCOM_01446 [Coprococcus comes ATCC 27758]
gi|225207855|gb|EEG90209.1| aminoacyl-tRNA hydrolase [Coprococcus comes ATCC 27758]
Length = 191
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 94/167 (56%), Gaps = 2/167 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PL 59
++D AE I+++T +A G+G + VLL KPQTYMNLSGES L YYK+ P
Sbjct: 25 VVDRLAEKYQIAIDTKKHRALIGKGVIEGQKVLLVKPQTYMNLSGESIRSLVEYYKIDPE 84
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
+LV +DD+ L G LR+R G GGHNG+K+++ N G+ F R+++G+G P D
Sbjct: 85 EELLVIYDDISLEVGQLRIRRKGSAGGHNGIKNIIANL-GSSVFPRIKVGVGEKPKGYDL 143
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 166
++L KF+ R ++ E L++ + ++ +N +K
Sbjct: 144 ADYVLGKFSKEDRVLMEEGYDLACEASALIMQGAIDQAMNEYNQKKK 190
>gi|289422642|ref|ZP_06424483.1| aminoacyl-tRNA hydrolase [Peptostreptococcus anaerobius 653-L]
gi|429728199|ref|ZP_19262937.1| aminoacyl-tRNA hydrolase [Peptostreptococcus anaerobius VPI 4330]
gi|289156942|gb|EFD05566.1| aminoacyl-tRNA hydrolase [Peptostreptococcus anaerobius 653-L]
gi|429150341|gb|EKX93261.1| aminoacyl-tRNA hydrolase [Peptostreptococcus anaerobius VPI 4330]
Length = 186
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 97/162 (59%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A+ +S++ + KA G+ +G V+L KPQTYMNLSGE+ ++ +YK+ L+
Sbjct: 25 VVDELAKRLNVSIDKIKHKALIGEARIGTEKVILVKPQTYMNLSGETAISISQFYKMDLD 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+++V +DD+ L G LR+R G G HNG+KS++ G+++F R+R+G+ +P D
Sbjct: 85 KLIVVYDDIDLDIGKLRIRKKGSAGSHNGMKSIIKCL-GSQDFPRVRVGVSKPEPGRDLA 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
F+L + + +D A+++ ++ ++ GL + +N
Sbjct: 144 DFVLSRVPKDRQNDMDLAIEKAASTVEEIIRSGLDVAMNKYN 185
>gi|56418581|ref|YP_145899.1| peptidyl-tRNA hydrolase [Geobacillus kaustophilus HTA426]
gi|375006854|ref|YP_004980483.1| peptidyl-tRNA hydrolase [Geobacillus thermoleovorans CCB_US3_UF5]
gi|448236355|ref|YP_007400413.1| peptidyl-tRNA hydrolase [Geobacillus sp. GHH01]
gi|68052880|sp|Q5L3U7.1|PTH_GEOKA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|56378423|dbj|BAD74331.1| stage V sporulation protein C (peptidyl-tRNA hydrolase)
[Geobacillus kaustophilus HTA426]
gi|359285699|gb|AEV17383.1| Peptidyl-tRNA hydrolase [Geobacillus thermoleovorans CCB_US3_UF5]
gi|445205197|gb|AGE20662.1| peptidyl-tRNA hydrolase [Geobacillus sp. GHH01]
Length = 186
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 88/162 (54%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ +S+ T + FG V V L KP TYMNLSGE PL YY + ++
Sbjct: 25 VIDELAKRWNVSLKTAKFRGLFGTASVSGEKVALCKPLTYMNLSGECVRPLMDYYDIAID 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V+V +DD+ LP G +RLR G GGHNG+KS++++ G +F R+RIGIGRP G
Sbjct: 85 DVIVIYDDLDLPPGKIRLRLKGSSGGHNGVKSLIHHL-GTEQFKRIRIGIGRPAGGQPVT 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F + +D A+ + + + + FN
Sbjct: 144 DYVLGRFTEEEKPAVDKAVLRAADACEQAVKAPFIQVMNDFN 185
>gi|403386102|ref|ZP_10928159.1| peptidyl-tRNA hydrolase [Kurthia sp. JC30]
Length = 188
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 84/161 (52%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
IDA A I +N A +G + V+L KP TYMNLSGE+ PL YY + +
Sbjct: 26 IDALANKWSIDLNQTKFNAVYGMSHRPEGKVILMKPLTYMNLSGEAVRPLMDYYDIDIED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DDM + LRLR G GGHNG+KS++ + G + F RLR+GIGRPP M
Sbjct: 86 IVVIYDDMDIDQASLRLRQKGSAGGHNGIKSLIQHL-GTQNFNRLRVGIGRPPQGMKVPD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F+ + A ++ + + K E FN
Sbjct: 145 YVLSHFSKEDWADMQAAYEKAADACEYFTQKPYAEVMNKFN 185
>gi|261417546|ref|YP_003251228.1| peptidyl-tRNA hydrolase [Geobacillus sp. Y412MC61]
gi|319765203|ref|YP_004130704.1| peptidyl-tRNA hydrolase [Geobacillus sp. Y412MC52]
gi|261374003|gb|ACX76746.1| peptidyl-tRNA hydrolase [Geobacillus sp. Y412MC61]
gi|317110069|gb|ADU92561.1| peptidyl-tRNA hydrolase [Geobacillus sp. Y412MC52]
Length = 186
Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 88/162 (54%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ +S+ T + FG V V L KP TYMNLSGE PL YY + ++
Sbjct: 25 VIDELAKRWNVSLKTAKFRGLFGTASVSGEKVALCKPLTYMNLSGECVRPLMDYYDIAID 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V+V +DD+ LP G +RLR G GGHNG+KS++++ G +F R+RIGIGRP G
Sbjct: 85 DVIVIYDDLDLPPGKIRLRLKGSSGGHNGVKSLIHHL-GTEQFKRIRIGIGRPTGGQPVT 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F + +D A+ + + + + FN
Sbjct: 144 DYVLGRFTEEEKPAVDKAVLRAADACEQAVKAPFIQVMNDFN 185
>gi|308171944|ref|YP_003918649.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens DSM 7]
gi|384157666|ref|YP_005539739.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens TA208]
gi|384162459|ref|YP_005543838.1| Peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens LL3]
gi|384166681|ref|YP_005548059.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens XH7]
gi|307604808|emb|CBI41179.1| Peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens DSM 7]
gi|328551754|gb|AEB22246.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens TA208]
gi|328910014|gb|AEB61610.1| Peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens LL3]
gi|341825960|gb|AEK87211.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens XH7]
Length = 188
Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 85/161 (52%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID ++ I +N +G GFV VLL KP TYMNLSGE PL YY
Sbjct: 26 IDELSKEWNIELNKTKFNGLYGMGFVSGKKVLLVKPLTYMNLSGECLRPLLDYYDADHED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+ V +DD+ LP G +RLR G GGHNG+KS++ + G EF R+RIGIGRP M
Sbjct: 86 LKVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQHL-GTPEFDRVRIGIGRPANGMKVVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F I+ A+ + V+ + L+K E FN
Sbjct: 145 YVLGAFTKEEAPHINDAVSKTVKACEASLTKPFLEVMNEFN 185
>gi|163815684|ref|ZP_02207056.1| hypothetical protein COPEUT_01864 [Coprococcus eutactus ATCC 27759]
gi|158448989|gb|EDP25984.1| aminoacyl-tRNA hydrolase [Coprococcus eutactus ATCC 27759]
Length = 186
Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 97/162 (59%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID AE I ++T KA G+G + V+LA PQT+MNLSGES + +YKL ++
Sbjct: 25 VIDELAERHNIKVDTCKHKALIGKGVINGEKVILAMPQTFMNLSGESVRAIMDFYKLTVD 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ L G +R+R G GGHNG+K+++ + G+++F R+R+G+G+ P MD
Sbjct: 85 DLIVVYDDIDLDVGKIRIREKGSAGGHNGMKNIILH-SGSQDFVRVRVGVGKKPEHMDLA 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+L +F+ + + + + L+++LS G + +N
Sbjct: 144 DHVLSRFSREDLPFMRESCGKACDALEVILSDGAVAAMNRYN 185
>gi|381210581|ref|ZP_09917652.1| peptidyl-tRNA hydrolase [Lentibacillus sp. Grbi]
Length = 186
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 84/132 (63%), Gaps = 1/132 (0%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
++L +PQT+MNLSGES PL +Y++ +LV DD+ LP G +RLR GGHGGHNG++
Sbjct: 56 IILLQPQTFMNLSGESVRPLMNFYQMKPEDILVIFDDLDLPTGKIRLRQKGGHGGHNGIR 115
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S++++ G +EF RLRIGIGRP + ++L+ F+ +E + +++++ + +
Sbjct: 116 SIIDHL-GTKEFNRLRIGIGRPDTAVPVVDYVLKPFSKAQQEDVQSSIEKSANACETWMQ 174
Query: 152 KGLTESARHFNT 163
K E FN+
Sbjct: 175 KPFAEVMNDFNS 186
>gi|224079331|ref|XP_002305824.1| predicted protein [Populus trichocarpa]
gi|222848788|gb|EEE86335.1| predicted protein [Populus trichocarpa]
Length = 161
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 68/89 (76%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MID A+++G+ MNT+ KA G G +G+ P+LLAKPQ YMN SGES GPLAA+YK+PL
Sbjct: 73 MIDRIAQAEGVLMNTIQSKALIGIGCIGEVPILLAKPQAYMNFSGESVGPLAAHYKIPLR 132
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNG 89
+L+ +D+M LP G+LR++ GGHG HNG
Sbjct: 133 HILLIYDEMNLPNGILRVQPKGGHGHHNG 161
>gi|168181009|ref|ZP_02615673.1| peptidyl-tRNA hydrolase [Clostridium botulinum NCTC 2916]
gi|226950996|ref|YP_002806087.1| peptidyl-tRNA hydrolase [Clostridium botulinum A2 str. Kyoto]
gi|421834409|ref|ZP_16269460.1| peptidyl-tRNA hydrolase [Clostridium botulinum CFSAN001627]
gi|254783862|sp|C1FNE6.1|PTH_CLOBJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|182668160|gb|EDT80139.1| peptidyl-tRNA hydrolase [Clostridium botulinum NCTC 2916]
gi|226842368|gb|ACO85034.1| aminoacyl-tRNA hydrolase [Clostridium botulinum A2 str. Kyoto]
gi|409744196|gb|EKN42857.1| peptidyl-tRNA hydrolase [Clostridium botulinum CFSAN001627]
Length = 189
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 96/165 (58%), Gaps = 3/165 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D AE I +N K ++G+G +G+ ++L KP TYMNLSGES A +YK+
Sbjct: 25 VVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLKPSTYMNLSGESVIEAANFYKIDKE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DDM + G LR+R G GGHNG+K+++ + + F R+R+GIG+P +
Sbjct: 85 NIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQHLNSDI-FPRVRVGIGQPDENV--V 141
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQ 165
++L KF+ RE I+ L + ++ G+TE+ +N ++
Sbjct: 142 NYVLGKFSKDEREIIEKVLAMSAKACISIVEDGVTEAMNKYNGVK 186
>gi|334564775|ref|ZP_08517766.1| hypothetical protein CbovD2_09386 [Corynebacterium bovis DSM 20582]
Length = 218
Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 90/135 (66%), Gaps = 6/135 (4%)
Query: 31 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 90
PV+LA+ + YMNLSG + G LA+++++P +V+V HD++ L GV+R++ GG GHNGL
Sbjct: 85 PVVLARSRGYMNLSGGAVGALASFFRVPPAQVVVVHDELDLDPGVVRVKLGGGENGHNGL 144
Query: 91 KSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 150
KS G R++ R+R+GIGRPPG+MDP A++L+ F + + + + + ++L++
Sbjct: 145 KSTTQAL-GTRDYVRVRVGIGRPPGRMDPAAYVLKPFTRAELDDLPVTVADAADAVRLVV 203
Query: 151 SKGLTES-----ARH 160
++G+ + ARH
Sbjct: 204 TRGVEAAQNEIHARH 218
>gi|339006645|ref|ZP_08639220.1| peptidyl-tRNA hydrolase [Brevibacillus laterosporus LMG 15441]
gi|421874172|ref|ZP_16305779.1| peptidyl-tRNA hydrolase [Brevibacillus laterosporus GI-9]
gi|338775854|gb|EGP35382.1| peptidyl-tRNA hydrolase [Brevibacillus laterosporus LMG 15441]
gi|372456827|emb|CCF15328.1| peptidyl-tRNA hydrolase [Brevibacillus laterosporus GI-9]
Length = 190
Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 85/143 (59%), Gaps = 1/143 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID ++ I ++T+ + G+G V VLL KPQTYMNLSGE+ G + ++YKL
Sbjct: 26 IDTLSKELQIPLSTMKFRGIIGEGNVQGEKVLLVKPQTYMNLSGETVGQIVSFYKLTAKD 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DD+ LP G LRLR G GGHNG+KS++ + G ++F+R++IGI RP
Sbjct: 86 IVVIYDDLDLPVGKLRLREKGSAGGHNGIKSIIAHL-GTQDFSRIKIGIDRPEPGKSVSD 144
Query: 122 FLLQKFNAIARERIDTALQEGVE 144
++L F+ I A+Q +
Sbjct: 145 YVLHSFSKSEWPHIQDAIQSAAK 167
>gi|317133015|ref|YP_004092329.1| peptidyl-tRNA hydrolase [Ethanoligenens harbinense YUAN-3]
gi|315470994|gb|ADU27598.1| peptidyl-tRNA hydrolase [Ethanoligenens harbinense YUAN-3]
Length = 208
Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 93/163 (57%), Gaps = 2/163 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D A G+ ++ KA G G V VLL KPQT+MNLSGE+ A +YKLP+ R
Sbjct: 47 LDMLAAKNGVRIDRAKFKALCGIGQVAGKRVLLLKPQTFMNLSGEAVAAAAHFYKLPVER 106
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIG-RPPGQMDPK 120
VLV DD+ LP G LR+R G GGHNG+KS++ G+ F R++IG+G +P D
Sbjct: 107 VLVLFDDISLPVGKLRVRRKGSAGGHNGIKSIIGEC-GSDGFPRVKIGVGDKPRPDYDLA 165
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
+++L KF+ R +L E ++ L+ G+ + +N+
Sbjct: 166 SWVLGKFSEAERPVFAQSLDRAAEAVEELIQNGVGSAMNLYNS 208
>gi|153940404|ref|YP_001392894.1| peptidyl-tRNA hydrolase [Clostridium botulinum F str. Langeland]
gi|384463854|ref|YP_005676449.1| aminoacyl-tRNA hydrolase [Clostridium botulinum F str. 230613]
gi|166199327|sp|A7GJD4.1|PTH_CLOBL RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|152936300|gb|ABS41798.1| aminoacyl-tRNA hydrolase [Clostridium botulinum F str. Langeland]
gi|295320871|gb|ADG01249.1| aminoacyl-tRNA hydrolase [Clostridium botulinum F str. 230613]
Length = 189
Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 96/165 (58%), Gaps = 3/165 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D AE I +N K ++G+G +G+ ++L KP TYMNLSGES A +YK+
Sbjct: 25 VVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLKPSTYMNLSGESVIEAANFYKIDKE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DDM + G LR+R G GGHNG+K+++ + + F R+R+GIG+P +
Sbjct: 85 NIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQHLNSDI-FPRVRVGIGQPDENV--V 141
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQ 165
++L KF+ RE I+ L + ++ G+TE+ +N ++
Sbjct: 142 NYVLGKFSKDQREIIEKVLAMSAKACISIVEDGVTEAMNKYNGVK 186
>gi|220930454|ref|YP_002507363.1| peptidyl-tRNA hydrolase [Clostridium cellulolyticum H10]
gi|220000782|gb|ACL77383.1| peptidyl-tRNA hydrolase [Clostridium cellulolyticum H10]
Length = 189
Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 85/138 (61%), Gaps = 1/138 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID + I ++ + KA +G+G + +L KPQT+MNLSGES + +YKLPL R
Sbjct: 29 IDYISVKYNIKLSKIGFKALYGEGSIEGIRTILVKPQTFMNLSGESVREIVDWYKLPLER 88
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DD+ L G +R+R G G HNG+KS++ + + F R+RIGIGR P + D
Sbjct: 89 LIVIYDDIDLEPGKMRVRPKGSSGTHNGMKSIIYQLQDD-SFPRVRIGIGRAPEKWDLAD 147
Query: 122 FLLQKFNAIARERIDTAL 139
++L KF+ R+ ID ++
Sbjct: 148 YVLSKFSKEDRQVIDQSI 165
>gi|383754964|ref|YP_005433867.1| putative peptidyl-tRNA hydrolase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381367016|dbj|BAL83844.1| putative peptidyl-tRNA hydrolase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 209
Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 87/160 (54%), Gaps = 20/160 (12%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++DA A+ GI A QGF+G +LL KP TYMN SG + GPL +YKL
Sbjct: 25 LVDALADKLGIDNWQDKFDAKVAQGFIGTEKILLVKPLTYMNESGRAIGPLLNFYKLDAE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRP-PG---- 115
++V HDDM +P G +R+R G GGHNG+KSV+ + G+ FAR+RIGIGRP PG
Sbjct: 85 DLIVVHDDMDIPAGTVRIRKKGSAGGHNGIKSVLAHL-GDEHFARVRIGIGRPLPGWTVV 143
Query: 116 ---------QMDPKA-----FLLQKFNAIARERIDTALQE 141
+ PK +LL I E +D A+ +
Sbjct: 144 NHVLAPFIDEDKPKIKEAIHYLLPAVECIVTEDVDMAMNK 183
>gi|406982008|gb|EKE03381.1| Peptidyl-tRNA hydrolase [uncultured bacterium]
Length = 198
Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 88/143 (61%)
Query: 20 ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 79
+ G+G + D VL+ +P TYMNLSG++ + +YK+ R+LV DD+ L G +R R
Sbjct: 45 SIIGKGVINDKEVLIVQPLTYMNLSGQAISKVLNWYKIEPTRLLVVFDDVSLEIGRIRFR 104
Query: 80 HNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTAL 139
+G GGHNG++S+++N G ++F+RL+IGIG PG K ++LQKF + ID +
Sbjct: 105 PSGSDGGHNGIRSIIDNLGGFKDFSRLKIGIGPDPGSDIRKTYVLQKFTKPEKNIIDKVV 164
Query: 140 QEGVEVLKLLLSKGLTESARHFN 162
+E ++ L +G+ ++ +N
Sbjct: 165 PVCIEGIEYYLKEGIEKAQNKYN 187
>gi|345858300|ref|ZP_08810697.1| peptidyl-tRNA hydrolase [Desulfosporosinus sp. OT]
gi|344328616|gb|EGW39997.1| peptidyl-tRNA hydrolase [Desulfosporosinus sp. OT]
Length = 185
Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 96/166 (57%), Gaps = 5/166 (3%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID AE+ + T + + +G V ++L KPQT+MNLSG S L +YK+
Sbjct: 25 LIDLLAEAYNLQFRT-KFQGLWTEGNVEGERLILLKPQTFMNLSGRSVSELTNFYKVLGG 83
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+L+ HDDM LP G +RLR GG GGHNG++S++ + G+ +F RL++G+GRPP + DP
Sbjct: 84 DLLIVHDDMDLPLGKIRLRDQGGAGGHNGIRSILAEY-GSEKFWRLKLGVGRPPREWDPA 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 166
++L F ++D L+ +V L + KG ES R N +
Sbjct: 143 RYVLSPFAEDELTQLDDLLERAEKVTNLWI-KG--ESGRAMNLYHR 185
>gi|168183620|ref|ZP_02618284.1| aminoacyl-tRNA hydrolase [Clostridium botulinum Bf]
gi|237797001|ref|YP_002864553.1| peptidyl-tRNA hydrolase [Clostridium botulinum Ba4 str. 657]
gi|259535145|sp|C3KW96.1|PTH_CLOB6 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|182673238|gb|EDT85199.1| aminoacyl-tRNA hydrolase [Clostridium botulinum Bf]
gi|229262516|gb|ACQ53549.1| aminoacyl-tRNA hydrolase [Clostridium botulinum Ba4 str. 657]
Length = 189
Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 96/165 (58%), Gaps = 3/165 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D AE I +N K ++G+G +G+ ++L KP TYMNLSGES A +YK+
Sbjct: 25 VVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLKPSTYMNLSGESVIEAANFYKIDKE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DDM + G LR+R G GGHNG+K+++ + + F R+R+GIG+P +
Sbjct: 85 NIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQHLNSDI-FPRVRVGIGQPDENV--V 141
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQ 165
++L KF+ RE I+ L + ++ G+TE+ +N ++
Sbjct: 142 NYVLGKFSKDQREIIEKVLAMSAKACISIVEDGVTEAMNKYNGVK 186
>gi|108801218|ref|YP_641415.1| peptidyl-tRNA hydrolase [Mycobacterium sp. MCS]
gi|119870369|ref|YP_940321.1| peptidyl-tRNA hydrolase [Mycobacterium sp. KMS]
gi|126437198|ref|YP_001072889.1| peptidyl-tRNA hydrolase [Mycobacterium sp. JLS]
gi|119390965|sp|Q1B425.1|PTH_MYCSS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166229423|sp|A3Q5H1.1|PTH_MYCSJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166229424|sp|A1UL23.1|PTH_MYCSK RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|108771637|gb|ABG10359.1| peptidyl-tRNA hydrolase [Mycobacterium sp. MCS]
gi|119696458|gb|ABL93531.1| peptidyl-tRNA hydrolase [Mycobacterium sp. KMS]
gi|126236998|gb|ABO00399.1| peptidyl-tRNA hydrolase [Mycobacterium sp. JLS]
Length = 192
Score = 115 bits (288), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 85/135 (62%), Gaps = 1/135 (0%)
Query: 20 ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 79
A G + V+LAKP+TYMN SG + GPLA +Y + V+V HD++ + G +RL+
Sbjct: 48 ADIATGRLAGRAVVLAKPRTYMNESGRNVGPLAKFYSVAPADVIVIHDELDIDFGRIRLK 107
Query: 80 HNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTAL 139
GG GHNGLKSV G ++F R+R+G+GRPPG+ D ++L+ F ++ R + T
Sbjct: 108 FGGGVAGHNGLKSVAAAL-GTKDFQRVRVGVGRPPGRKDAATYVLEPFTSVERPEVPTIC 166
Query: 140 QEGVEVLKLLLSKGL 154
++ + +LL+++GL
Sbjct: 167 EQAADATELLIAQGL 181
>gi|383819051|ref|ZP_09974330.1| peptidyl-tRNA hydrolase [Mycobacterium phlei RIVM601174]
gi|383337847|gb|EID16222.1| peptidyl-tRNA hydrolase [Mycobacterium phlei RIVM601174]
Length = 192
Score = 115 bits (288), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 81/123 (65%), Gaps = 1/123 (0%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+LAKP+TYMN SG GPLA +Y +P V+V HD++ + G +RL+ GG GHNGL+
Sbjct: 60 VVLAKPRTYMNESGRQVGPLAKFYSVPPADVIVIHDELDIDFGRIRLKFGGGIAGHNGLR 119
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
SV G +F R+R+GIG+PPG+M+ F+L F A + + T Q+ + ++LL+S
Sbjct: 120 SVGAAL-GTNDFHRVRVGIGKPPGRMEGAKFVLSTFTAAEWKEVPTICQQAADAVELLIS 178
Query: 152 KGL 154
+GL
Sbjct: 179 QGL 181
>gi|86605936|ref|YP_474699.1| peptidyl-tRNA hydrolase [Synechococcus sp. JA-3-3Ab]
gi|119391024|sp|Q2JV16.1|PTH_SYNJA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|86554478|gb|ABC99436.1| peptidyl-tRNA hydrolase [Synechococcus sp. JA-3-3Ab]
Length = 225
Score = 115 bits (288), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 97/178 (54%), Gaps = 3/178 (1%)
Query: 1 MIDAFAESQGISMN-TVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPL 59
++D AE GI + + ++G+GF L KP+TYMN SGE+ + +YKL
Sbjct: 38 VVDQLAERWGIPLALEKRFQGSYGEGFALGGKRRLLKPETYMNRSGEAVRAVLDWYKLDP 97
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
VLV +DDM LP G LRLR +G GGHNG+KSV+ + G+ F RLR+G+GRP G D
Sbjct: 98 ASVLVVYDDMDLPLGRLRLRGSGSAGGHNGMKSVIEHL-GSEAFPRLRLGVGRPKGNQDR 156
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHIRLQNMPA 177
+L F + +D L+ V ++ L +GL + FN + + Q+ PA
Sbjct: 157 VGHVLGSFEPAEQAVLDRVLRAAVAAVECCLQEGLKTAMNRFNPLD-FSGPDRQDQPA 213
>gi|170759071|ref|YP_001788880.1| peptidyl-tRNA hydrolase [Clostridium botulinum A3 str. Loch Maree]
gi|238688504|sp|B1KTE2.1|PTH_CLOBM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|169406060|gb|ACA54471.1| aminoacyl-tRNA hydrolase [Clostridium botulinum A3 str. Loch Maree]
Length = 189
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 96/165 (58%), Gaps = 3/165 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D AE I +N K ++G+G +G+ ++L KP TYMNLSGES A +YK+
Sbjct: 25 VVDIVAEKYNIEINRQKFKGSYGEGRIGNEKIILLKPSTYMNLSGESVIEAANFYKIDKE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DDM + G LR+R G GGHNG+K+++ + + F R+R+GIG+P +
Sbjct: 85 NIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQHLNSDI-FPRVRVGIGQPDENV--V 141
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQ 165
++L KF+ RE I+ L + ++ G+TE+ +N ++
Sbjct: 142 NYVLGKFSKDQREVIEKVLAMSAKACISIVEDGVTEAMNKYNGVK 186
>gi|297582392|ref|YP_003698172.1| peptidyl-tRNA hydrolase [Bacillus selenitireducens MLS10]
gi|297140849|gb|ADH97606.1| peptidyl-tRNA hydrolase [Bacillus selenitireducens MLS10]
Length = 191
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 89/163 (54%), Gaps = 1/163 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID ++ GI ++ K FG P L KP T+MNLSGES +A YY +P
Sbjct: 25 VIDHVSDQLGIPLDQNKFKGVFGTHRTPKGPFTLLKPMTFMNLSGESIRQIADYYDIPPE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV +DD+ LP G +RLR GGHGGHNG++S +++ F R+RIGIGRP
Sbjct: 85 DILVIYDDLDLPPGKIRLRTKGGHGGHNGIRSTLSHLN-TESFNRIRIGIGRPEPGTKVT 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
+L +F+ RE +D A+++ + ++ + FN+
Sbjct: 144 DHVLGRFSPDDRELVDEAVRQAAKAVEAWMDDSFILVMNDFNS 186
>gi|375360744|ref|YP_005128783.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|385267079|ref|ZP_10045166.1| peptidyl-tRNA hydrolase [Bacillus sp. 5B6]
gi|421729451|ref|ZP_16168583.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|451348557|ref|YP_007447188.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens IT-45]
gi|452854116|ref|YP_007495799.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
gi|371566738|emb|CCF03588.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|385151575|gb|EIF15512.1| peptidyl-tRNA hydrolase [Bacillus sp. 5B6]
gi|407076695|gb|EKE49676.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|449852315|gb|AGF29307.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens IT-45]
gi|452078376|emb|CCP20126.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
Length = 188
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 85/161 (52%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID ++ I +N +G GFV VLL KP TYMNLSGE PL YY
Sbjct: 26 IDELSKEWNIELNKTKFNGLYGMGFVSGKKVLLVKPLTYMNLSGECLRPLLDYYDADHED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+ V +DD+ LP G +RLR G GGHNG+KS++ + G EF R+RIGIGRP M
Sbjct: 86 LKVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQHL-GTPEFDRVRIGIGRPVNGMKVVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F I+ A+ + V+ + L+K E FN
Sbjct: 145 YVLGAFTKEEAPHINDAVSKTVKACEASLTKPFLEVMNEFN 185
>gi|220932953|ref|YP_002509861.1| Aminoacyl-tRNA hydrolase [Halothermothrix orenii H 168]
gi|219994263|gb|ACL70866.1| Aminoacyl-tRNA hydrolase [Halothermothrix orenii H 168]
Length = 187
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 1/145 (0%)
Query: 19 KATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRL 78
+A G+G + V+LA+P TYMN SG + + YY L+ +++ +DD+ LP G +R+
Sbjct: 44 EALCGRGMIRGQKVMLAQPLTYMNNSGRAVRKIIDYYDFSLDNIIIIYDDLDLPPGKIRI 103
Query: 79 RHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTA 138
R G GGHNG+KS++N REF R+RIGIGRPP ++ ++L F++ E +
Sbjct: 104 RKKGSSGGHNGVKSIINCL-DTREFPRIRIGIGRPPAGVNVVDYVLGYFSSEDSEVMSDV 162
Query: 139 LQEGVEVLKLLLSKGLTESARHFNT 163
L VE ++ +L KGL ++ FN+
Sbjct: 163 LDTTVEAVETILEKGLEQAMNIFNS 187
>gi|435852895|ref|YP_007314214.1| peptidyl-tRNA hydrolase [Halobacteroides halobius DSM 5150]
gi|433669306|gb|AGB40121.1| peptidyl-tRNA hydrolase [Halobacteroides halobius DSM 5150]
Length = 185
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 89/151 (58%), Gaps = 2/151 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D A++ +N KA + V ++LAKPQT+MN SG++ ++ YY +
Sbjct: 26 LDRLAKNYHTEINREEHKAMIEKIRVNGETIILAKPQTFMNKSGQAVKKISDYYDIDPKD 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+++ +DD+ L G +R+R GGHGGHNG+KS+ G +EF RLR+GIGRP QM
Sbjct: 86 IVIVYDDLDLAPGRIRVRPTGGHGGHNGIKSIFAGL-GTKEFPRLRVGIGRPK-QMSVVD 143
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSK 152
++L +F +ID AL E V+ LKL L +
Sbjct: 144 YVLDQFETEEWSKIDQALDEAVDALKLYLEQ 174
>gi|392417978|ref|YP_006454583.1| peptidyl-tRNA hydrolase [Mycobacterium chubuense NBB4]
gi|390617754|gb|AFM18904.1| peptidyl-tRNA hydrolase [Mycobacterium chubuense NBB4]
Length = 192
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 102/169 (60%), Gaps = 7/169 (4%)
Query: 1 MIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLP 58
+ D A+ G + VH K A G +G V+LAKP+TYMN SG GPLA +Y +
Sbjct: 28 VADVLADRIGAAFK-VHKKSGAEVVTGRLGGKSVVLAKPRTYMNESGRQVGPLAKFYSVA 86
Query: 59 LNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMD 118
++V HD++ + G +RL+ GG GHNGL+SV + G+ +F R+RIGIGRPPG+
Sbjct: 87 PADIIVIHDELDIDFGRIRLKSGGGVAGHNGLRSVGSAL-GSNDFQRVRIGIGRPPGRQS 145
Query: 119 PKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKY 167
+F+L+ FN+ R + T +++ + +LL++ G+ E A+ NT+ +
Sbjct: 146 GASFVLENFNSRERPELGTIVEQAADATELLIAHGI-EPAQ--NTVHAW 191
>gi|365845743|ref|ZP_09386497.1| aminoacyl-tRNA hydrolase [Flavonifractor plautii ATCC 29863]
gi|364559189|gb|EHM37180.1| aminoacyl-tRNA hydrolase [Flavonifractor plautii ATCC 29863]
Length = 198
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 93/162 (57%), Gaps = 2/162 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D AE + + + +A VG VLL KP TYMNLSGE+ G A +YKLP R
Sbjct: 37 VDELAERARVPVQKLKHRALTNTLEVGSVKVLLMKPVTYMNLSGEAVGEAARFYKLPPER 96
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPP-GQMDPK 120
VLV DD+ LP G LR+R G GGHNGLKS++ + G +F R+++G+G+ P D
Sbjct: 97 VLVISDDVSLPVGKLRIRKGGSAGGHNGLKSIIQHL-GTDQFPRIKVGVGQKPHPDYDMA 155
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L KF + I A+++ + ++ L+ +G ++ FN
Sbjct: 156 DWVLSKFAGEDLKTITEAIRKAADAVECLIQEGPDKAMNRFN 197
>gi|407475939|ref|YP_006789816.1| peptidyl-tRNA hydrolase [Exiguobacterium antarcticum B7]
gi|407060018|gb|AFS69208.1| Peptidyl-tRNA hydrolase [Exiguobacterium antarcticum B7]
Length = 185
Score = 115 bits (287), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 84/144 (58%), Gaps = 1/144 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+DA A+ GI + KA FG G + VLL KP TYMNLSGE+ PL +YK+ +
Sbjct: 26 VDALAKEHGIKLTESKFKAVFGTGMMKGERVLLVKPLTYMNLSGEAVRPLLDFYKIAVED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
VLV +DD+ LP +RLR G GGHNG+KS++ + G ++ RL++G+GRPP +
Sbjct: 86 VLVIYDDLDLPLEKMRLRSKGSAGGHNGVKSLIQHL-GTQDIKRLKLGVGRPPAPIQVID 144
Query: 122 FLLQKFNAIARERIDTALQEGVEV 145
++L F + + L + V +
Sbjct: 145 WVLMPFAKSEQVTLQHVLADSVNI 168
>gi|42524124|ref|NP_969504.1| peptidyl-tRNA hydrolase [Bdellovibrio bacteriovorus HD100]
gi|68052963|sp|Q6MJR3.1|PTH_BDEBA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|39576332|emb|CAE80497.1| pth [Bdellovibrio bacteriovorus HD100]
Length = 187
Score = 115 bits (287), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 94/163 (57%), Gaps = 2/163 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D E G KA Q + D PV+ KPQTYMNLSGES PL +YK+PL R
Sbjct: 26 VDFLMEGLGNPPIKNQFKAEIAQAKIKDHPVIFCKPQTYMNLSGESVQPLMGFYKIPLER 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP-K 120
++V HD++ P ++++ N GHGGHNG+KS+ + G+ ++ RLR+G+GRP P
Sbjct: 86 LIVIHDEIDQPFAQMKIQKNRGHGGHNGIKSI-SGLMGSMDYTRLRLGVGRPANPNIPVP 144
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L KF ++ L + + ++ ++ G+ +++ FNT
Sbjct: 145 DYVLGKFTKEEFAQMPDFLNKAGDAVESIILDGIQKASTKFNT 187
>gi|394994187|ref|ZP_10386915.1| peptidyl-tRNA hydrolase [Bacillus sp. 916]
gi|393804963|gb|EJD66354.1| peptidyl-tRNA hydrolase [Bacillus sp. 916]
Length = 188
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 85/161 (52%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID ++ I +N +G GFV VLL KP TYMNLSGE PL YY
Sbjct: 26 IDELSKEWNIELNKTKFNGLYGMGFVSGKKVLLVKPLTYMNLSGECLRPLLDYYDADHED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+ V +DD+ LP G +RLR G GGHNG+KS++ + G EF R+RIGIGRP M
Sbjct: 86 LKVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQHL-GTPEFDRVRIGIGRPVNGMKVVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F I+ A+ + V+ + L+K E FN
Sbjct: 145 YVLGAFTKEEAPHINDAVTKTVKACEASLTKPFLEVMNEFN 185
>gi|313893361|ref|ZP_07826935.1| aminoacyl-tRNA hydrolase [Veillonella sp. oral taxon 158 str.
F0412]
gi|313442130|gb|EFR60548.1| aminoacyl-tRNA hydrolase [Veillonella sp. oral taxon 158 str.
F0412]
Length = 192
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 92/162 (56%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++DA A+S + +A V VLL KPQT+MN+SGES GPL YYK+ +
Sbjct: 25 VVDAIADSVPHTPWREEQRAEVCSITVAGEKVLLVKPQTFMNVSGESVGPLMRYYKIDPS 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V +DDM LP G LR+R NG GGHNG+KS++++ G F R R+GIGRP Q
Sbjct: 85 DVYCIYDDMDLPVGKLRIRPNGSSGGHNGIKSLISHL-GTENFPRFRVGIGRPLPQWTVI 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+L F+ ++E++ +++ V+ + L G+ + FN
Sbjct: 144 DHVLAPFSEESQEKVQKGIKDTVKAVLGTLEVGIDKGMNQFN 185
>gi|297528421|ref|YP_003669696.1| peptidyl-tRNA hydrolase [Geobacillus sp. C56-T3]
gi|297251673|gb|ADI25119.1| peptidyl-tRNA hydrolase [Geobacillus sp. C56-T3]
Length = 186
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 87/162 (53%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ +S+ T + FG V V L KP TYMNLSGE PL YY + ++
Sbjct: 25 VIDELAKRWNVSLKTAKFRGLFGTASVSGEKVALCKPLTYMNLSGECVRPLMDYYDIAID 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V+V +DD+ LP G +RLR G GGHNG+KS++++ G +F R+RIGIGRP G
Sbjct: 85 DVIVIYDDLDLPPGKIRLRLKGSSGGHNGVKSLIHHL-GTEQFKRIRIGIGRPTGGQPVT 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F + +D A+ + + + FN
Sbjct: 144 DYVLGRFTEEEKPAVDKAVLRAANACEQAVKAPFIQVMNDFN 185
>gi|345020768|ref|ZP_08784381.1| peptidyl-tRNA hydrolase [Ornithinibacillus scapharcae TW25]
Length = 186
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 89/162 (54%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID + ++ K + + VLL +PQTYMNLSGES PL YY + +
Sbjct: 25 VIDELLSRHNLKLDKDKFKGKYTIATIHGEKVLLLEPQTYMNLSGESLRPLMDYYDVAVE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
VLV +D++ LP G +RLR GGHGGHNG++S++ + G ++F R+R+G+GRP +
Sbjct: 85 DVLVVYDELDLPTGKIRLRQKGGHGGHNGIRSIITHL-GTKDFKRIRLGVGRPTSSIPVV 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F +E + ++ + + + L K + FN
Sbjct: 144 DYVLGDFAKAEQELVQESIAKAADACENWLEKSFDKVMNDFN 185
>gi|315644368|ref|ZP_07897508.1| peptidyl-tRNA hydrolase [Paenibacillus vortex V453]
gi|315280245|gb|EFU43537.1| peptidyl-tRNA hydrolase [Paenibacillus vortex V453]
Length = 187
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 90/161 (55%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+DA AE G+ N CK+ +G +G + +L KP T+MNLSGE+ YYK+ L
Sbjct: 26 LDALAERHGMKFNQNKCKSVIAEGMIGGSKTVLIKPMTFMNLSGEAVRAYMDYYKVNLED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DD+ G +RLR+ G GGHNG+KS++ + G + F R+R+GI RP
Sbjct: 86 MIVVYDDLDTVVGKIRLRYQGSAGGHNGIKSIIQH-TGTQSFNRVRMGISRPEPGYAIVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F RE++ + ++E + L+ L ++ FN
Sbjct: 145 YVLGTFPKKEREQLQSMVEETCDALEFSLDHTFEQTMAKFN 185
>gi|325265260|ref|ZP_08131985.1| aminoacyl-tRNA hydrolase [Clostridium sp. D5]
gi|324029439|gb|EGB90729.1| aminoacyl-tRNA hydrolase [Clostridium sp. D5]
Length = 192
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 98/167 (58%), Gaps = 2/167 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A I+++T +A G+G +G V+LAKPQTYMNLSGES L YYK+
Sbjct: 25 VIDTIASKYNIAVDTKKHRAFIGKGVIGGQKVILAKPQTYMNLSGESIISLVEYYKIDEE 84
Query: 61 R-VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
+ ++V +DD+ L G LR+R G GGHNG+K+++++ G+ F R+++G+G P + D
Sbjct: 85 QELIVIYDDVSLGVGQLRIRAKGSAGGHNGIKNIISHL-GSEVFPRIKVGVGEKPPKYDL 143
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 166
++L F E ++ + V +++++S + + +N +K
Sbjct: 144 ADYVLGHFTKAEHELMEAGYENAVHAVEMIISGEIQAAMNEYNRKKK 190
>gi|145222528|ref|YP_001133206.1| peptidyl-tRNA hydrolase [Mycobacterium gilvum PYR-GCK]
gi|315442976|ref|YP_004075855.1| peptidyl-tRNA hydrolase [Mycobacterium gilvum Spyr1]
gi|189038156|sp|A4T6N5.1|PTH_MYCGI RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|145215014|gb|ABP44418.1| peptidyl-tRNA hydrolase [Mycobacterium gilvum PYR-GCK]
gi|315261279|gb|ADT98020.1| peptidyl-tRNA hydrolase [Mycobacterium gilvum Spyr1]
Length = 192
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 98/168 (58%), Gaps = 7/168 (4%)
Query: 3 DAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
D A+ G + VH K A G + PV+LAKP+ YMN SG GPLA +Y +
Sbjct: 30 DVLADRMGETFK-VHKKSGAEVTTGRLAGRPVVLAKPRVYMNESGRQVGPLAKFYSIAPT 88
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V++ HD++ + G +RL+ GG GHNGL+SV + N +F R+R+GIGRPPGQ
Sbjct: 89 DVVIIHDELDIDFGRIRLKAGGGVAGHNGLRSVGSALSTN-DFQRVRVGIGRPPGQKSGA 147
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYK 168
+F+L+ FN+ R + T +++ + +LL+ G+ E A+ NT+ +
Sbjct: 148 SFVLEPFNSRERPELGTIIEQAADATELLIELGI-EPAQ--NTVHAWS 192
>gi|303229597|ref|ZP_07316385.1| aminoacyl-tRNA hydrolase [Veillonella atypica ACS-134-V-Col7a]
gi|303231900|ref|ZP_07318609.1| aminoacyl-tRNA hydrolase [Veillonella atypica ACS-049-V-Sch6]
gi|401679444|ref|ZP_10811371.1| aminoacyl-tRNA hydrolase [Veillonella sp. ACP1]
gi|429760033|ref|ZP_19292525.1| aminoacyl-tRNA hydrolase [Veillonella atypica KON]
gi|302513429|gb|EFL55462.1| aminoacyl-tRNA hydrolase [Veillonella atypica ACS-049-V-Sch6]
gi|302515722|gb|EFL57676.1| aminoacyl-tRNA hydrolase [Veillonella atypica ACS-134-V-Col7a]
gi|400219378|gb|EJO50246.1| aminoacyl-tRNA hydrolase [Veillonella sp. ACP1]
gi|429178745|gb|EKY20017.1| aminoacyl-tRNA hydrolase [Veillonella atypica KON]
Length = 192
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 90/162 (55%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+IDA A+S + KA V VLL KPQT+MN SGES GPL YYK+ +
Sbjct: 25 VIDAIADSVSHTPWREEQKAEVCSINVAGEKVLLVKPQTFMNASGESVGPLMRYYKIDPS 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V +DDM LP G LR+R NG GGHNG+KS++++ G F R R+GIGRP Q
Sbjct: 85 DVYCIYDDMDLPVGKLRIRPNGSSGGHNGIKSLISHI-GTENFPRFRVGIGRPLPQWTVI 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+L F+ +E++ +++ V+ + L G+ + FN
Sbjct: 144 DHVLAPFSEENQEKVQKGIKDTVKAVLGTLEVGIDKGMNQFN 185
>gi|357014640|ref|ZP_09079639.1| Pth [Paenibacillus elgii B69]
Length = 186
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 89/161 (55%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D FA+ GI + CK G+G V V L KPQTYMNLSGES +YK +
Sbjct: 26 LDRFADKHGIKITQSKCKGLLGEGHVAGQKVYLLKPQTYMNLSGESIRAFMDFYKAAIED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DD+ P G +RLR+ G GGHNG+KS + + G + F R+R+GI RP D
Sbjct: 86 LIVIYDDLDTPYGQIRLRYQGSAGGHNGIKSAIAHL-GTQSFQRIRMGISRPAPGRDIAD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F+ +++ L + V+ ++ +L ++ FN
Sbjct: 145 YVLSTFSKEEFQQMPGLLDKTVDAMEHILEHPFEKTMAKFN 185
>gi|429503586|ref|YP_007184770.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|429485176|gb|AFZ89100.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
Length = 188
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 85/161 (52%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID ++ I +N +G GFV VLL KP TYMNLSGE PL YY
Sbjct: 26 IDELSKEWNIELNKTKFNGLYGIGFVSGKKVLLVKPLTYMNLSGECLRPLLDYYDADHED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+ V +DD+ LP G +RLR G GGHNG+KS++ + G EF R+RIGIGRP M
Sbjct: 86 LKVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQHL-GTPEFDRVRIGIGRPVNGMKVVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F I+ A+ + V+ + L+K E FN
Sbjct: 145 YVLGAFTKEEAPHINDAVSKTVKACEASLTKPFLEVMNEFN 185
>gi|154684572|ref|YP_001419733.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens FZB42]
gi|166199305|sp|A7Z0H6.1|PTH_BACA2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|154350423|gb|ABS72502.1| SpoVC [Bacillus amyloliquefaciens FZB42]
Length = 188
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 85/161 (52%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID ++ I +N +G GFV VLL KP TYMNLSGE P+ YY
Sbjct: 26 IDELSKEWNIELNKTKFNGLYGMGFVSGKKVLLVKPLTYMNLSGECLRPILDYYDADHED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+ V +DD+ LP G +RLR G GGHNG+KS++ + G EF R+RIGIGRP M
Sbjct: 86 LKVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQHL-GTPEFDRVRIGIGRPVNGMKVVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F I+ A+ + V+ + L+K E FN
Sbjct: 145 YVLGAFTKEEAPHINDAVSKTVKACEASLTKPFLEVMNEFN 185
>gi|373119607|ref|ZP_09533701.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 7_1_58FAA]
gi|371662163|gb|EHO27372.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 7_1_58FAA]
Length = 198
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 93/162 (57%), Gaps = 2/162 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D AE + + + +A VG VLL KP TYMNLSGE+ G A +YKLP R
Sbjct: 37 VDELAERARVPVQKLKHRALTNTLEVGGVKVLLMKPVTYMNLSGEAVGEAARFYKLPPER 96
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPP-GQMDPK 120
VLV DD+ LP G LR+R G GGHNGLKS++ + G +F R+++G+G+ P D
Sbjct: 97 VLVISDDVSLPVGKLRIRKGGSAGGHNGLKSIIQHL-GTDQFPRIKVGVGQKPHPDYDMA 155
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L KF + I A+++ + ++ L+ +G ++ FN
Sbjct: 156 DWVLSKFAGEDLKTITEAIRKAADAVECLIQEGPDKAMNRFN 197
>gi|374611741|ref|ZP_09684525.1| peptidyl-tRNA hydrolase [Mycobacterium tusciae JS617]
gi|373548709|gb|EHP75394.1| peptidyl-tRNA hydrolase [Mycobacterium tusciae JS617]
Length = 192
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 88/136 (64%), Gaps = 4/136 (2%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+LAKP+ YMN SG PLA +Y + ++V HD++ + G +RL+ GG GHNGL+
Sbjct: 60 VVLAKPRCYMNESGRQVAPLAKFYSVAPADIIVIHDELDIDFGRIRLKSGGGVAGHNGLR 119
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
SV + G +FAR+RIGIGRPPG+M+ AF+L FN+ + + T ++ + +LL+S
Sbjct: 120 SVGSAL-GTNDFARVRIGIGRPPGRMEGAAFVLGTFNSAEWKEVPTICEQAADATELLVS 178
Query: 152 KGLTESARHFNTIQKY 167
+GL E A+ NT+ +
Sbjct: 179 QGL-EPAQ--NTVHAW 191
>gi|238926854|ref|ZP_04658614.1| aminoacyl-tRNA hydrolase [Selenomonas flueggei ATCC 43531]
gi|238885386|gb|EEQ49024.1| aminoacyl-tRNA hydrolase [Selenomonas flueggei ATCC 43531]
Length = 208
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 92/168 (54%), Gaps = 1/168 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+IDA AE +S ++ + +G + L KP TYMN SGE+ GP+ +YYKL
Sbjct: 25 LIDALAEHLNVSAWKEDFSSSVAEARIGGEKIFLVKPLTYMNNSGEAIGPMLSYYKLSSE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V HDDM +P G +R+R G GGHNG+KS++++ G+ FAR+RIGIGRPP
Sbjct: 85 DLIVVHDDMDIPVGTVRIRKKGSSGGHNGIKSILSHV-GSEAFARVRIGIGRPPAGWTVI 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYK 168
+L F +I + + + +++ G + +N +K K
Sbjct: 144 NHVLAPFAPEDTPKIRETIAYLLPAVTCIVTDGTDFAMNRYNPHRKKK 191
>gi|404372896|ref|ZP_10978177.1| peptidyl-tRNA hydrolase [Clostridium sp. 7_2_43FAA]
gi|226914271|gb|EEH99472.1| peptidyl-tRNA hydrolase [Clostridium sp. 7_2_43FAA]
Length = 191
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 93/167 (55%), Gaps = 3/167 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID + I +N K +G+GF+ + V+L KP TYMNLSGES + +YKL +
Sbjct: 26 IDYISNKYNIDINRTKFKGVYGEGFINNNKVILLKPTTYMNLSGESIREVINFYKLENDE 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
V+V +DD+ L G LR+R G GGHNG+KS++ N G F R++IG+G+P D +
Sbjct: 86 VIVIYDDISLEVGKLRIREKGSAGGHNGIKSIIANI-GTDIFPRVKIGVGQPTS--DLVS 142
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYK 168
+L +FN + + + + +++++ G E+ FN + K
Sbjct: 143 HVLGRFNKEDMDSLIEVIDASSKAVEVIIKDGTKEAMNRFNGFKTSK 189
>gi|392939895|ref|ZP_10305539.1| peptidyl-tRNA hydrolase [Thermoanaerobacter siderophilus SR4]
gi|392291645|gb|EIW00089.1| peptidyl-tRNA hydrolase [Thermoanaerobacter siderophilus SR4]
Length = 185
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 94/162 (58%), Gaps = 3/162 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID AE GI++ + K+ G+G+ V+L KPQT++N SGE+ +YK+PL
Sbjct: 25 VIDELAEKLGINVTKLKFKSLVGEGYFKGEKVILLKPQTFVNSSGEALYDAVNFYKIPLE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V+V +DD L G +R+R G GGHNG+KS++ + EF R+RIGIG+P Q D
Sbjct: 85 NVIVIYDDKDLDVGKIRIRKKGSSGGHNGMKSII-YLLNSEEFPRVRIGIGKP--QKDLV 141
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+ +L KF ++ ID A+ + + + ++ G+ + FN
Sbjct: 142 SHVLGKFEESEKKLIDEAVIKAADAVIDIIENGIEHAMSKFN 183
>gi|319654944|ref|ZP_08009018.1| peptidyl-tRNA hydrolase [Bacillus sp. 2_A_57_CT2]
gi|317393369|gb|EFV74133.1| peptidyl-tRNA hydrolase [Bacillus sp. 2_A_57_CT2]
Length = 186
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 88/162 (54%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID ++ I +N K FG G+V V L KP TYMNLSGES + Y+++ +
Sbjct: 25 VIDVLSDRLNIPLNQAKLKGVFGTGYVNGEKVFLLKPLTYMNLSGESIRAVMDYFEINDD 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ LP G +RLR G GGHNG+KS + + G +EF R+R+GI RPP M
Sbjct: 85 ELVVIYDDLDLPVGKIRLRQKGSAGGHNGIKSTIAHL-GTQEFNRIRVGIDRPPSGMKVP 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F + +D ++ + + K + FN
Sbjct: 144 DYVLGRFTKEEQAIMDETAKKCADACEEWFKKPFLQVMNDFN 185
>gi|149907585|ref|ZP_01896332.1| peptidyl-tRNA hydrolase [Moritella sp. PE36]
gi|149809255|gb|EDM69184.1| peptidyl-tRNA hydrolase [Moritella sp. PE36]
Length = 196
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 84/139 (60%)
Query: 27 VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGG 86
V V L P T+MNLSG+S LA +Y++ + ++LV HD++ LP GV + + G HGG
Sbjct: 56 VAGQDVRLLVPTTFMNLSGKSVSALAKFYRIDVTQILVVHDELDLPPGVAKFKQGGSHGG 115
Query: 87 HNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 146
HNGLK +++ ++EF RLRIGIG P + ++L K A +E++D A+ E V +
Sbjct: 116 HNGLKDIISKMANSKEFYRLRIGIGHPGHKDKVTGYVLGKAQAKEQEQMDAAIDEAVRCI 175
Query: 147 KLLLSKGLTESARHFNTIQ 165
+L G+T++ +T +
Sbjct: 176 DILAKDGMTKAMTRLHTFK 194
>gi|51854332|gb|AAU10712.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 154
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/128 (51%), Positives = 77/128 (60%), Gaps = 22/128 (17%)
Query: 47 STGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARL 106
GPLAAYYKLPLNRVLV D LPCG+LRL+ GG G HNG SV E
Sbjct: 29 EVGPLAAYYKLPLNRVLVAFDGTDLPCGILRLQPKGGFGRHNG--SVDFVTMCFNEVICH 86
Query: 107 RIGIGRPPGQMDPKAFLLQKFNAIARER--------------------IDTALQEGVEVL 146
GIG PPGQMDPKAF+LQKFN + ER ID+A++EGVE+L
Sbjct: 87 SKGIGCPPGQMDPKAFVLQKFNKTSLERIHMTNSLKPWLYPAYVKTLKIDSAIEEGVEIL 146
Query: 147 KLLLSKGL 154
KL+++KGL
Sbjct: 147 KLVVTKGL 154
>gi|168187037|ref|ZP_02621672.1| peptidyl-tRNA hydrolase [Clostridium botulinum C str. Eklund]
gi|169295068|gb|EDS77201.1| peptidyl-tRNA hydrolase [Clostridium botulinum C str. Eklund]
Length = 190
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 91/162 (56%), Gaps = 2/162 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D +E I +N K +G G + V+L KP TYMNLSGES +YK+P
Sbjct: 25 IVDVISEKYNIDLNKKKFKGMYGSGIIAGEKVILLKPLTYMNLSGESVKEAMDFYKIPNE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V+V +DD+ L G +R+R G GGHNG+K+++ +F G+ F R+++G+G+P Q D
Sbjct: 85 NVIVIYDDISLEVGRMRIREKGSAGGHNGIKNIIAHF-GSDVFPRIKVGVGQPI-QKDLV 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+ +L KFN E + + + + ++ KG E+ FN
Sbjct: 143 SHVLGKFNIEDVEILSKVFEAANDATESIIEKGTAEAMNKFN 184
>gi|210623287|ref|ZP_03293704.1| hypothetical protein CLOHIR_01654 [Clostridium hiranonis DSM 13275]
gi|210153688|gb|EEA84694.1| hypothetical protein CLOHIR_01654 [Clostridium hiranonis DSM 13275]
Length = 186
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 92/162 (56%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ GIS+ + KA G+G VG V+L KP TYMNLSGES L +YK L+
Sbjct: 25 VIDRLADEYGISVTKIKHKALIGEGRVGTEKVVLVKPTTYMNLSGESVVSLYQFYKPDLD 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+++V +DD+ L G LR+R G G HNG++S+ G ++F R R+G+G+P D
Sbjct: 85 KLIVIYDDIDLDVGKLRIRKKGSPGTHNGMRSITQCL-GTKDFPRFRVGVGKPDKGRDLA 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
F+L + E ++ ++ + + ++ +G+ + +N
Sbjct: 144 DFVLSRVPKEQDEAMNEGFEKTAKAIDSMIREGIDMAMNKYN 185
>gi|336176810|ref|YP_004582185.1| peptidyl-tRNA hydrolase [Frankia symbiont of Datisca glomerata]
gi|334857790|gb|AEH08264.1| Peptidyl-tRNA hydrolase [Frankia symbiont of Datisca glomerata]
Length = 203
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 96/163 (58%), Gaps = 1/163 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D AE T +A + + LLAKP+++MN+SG L A++K+ +
Sbjct: 37 VLDLLAERVRDRFRTHRGRADVAEARLAGVRALLAKPRSFMNVSGSPVEALRAFFKVDIG 96
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V HD++ +P G +RL+ GG GHNGL+SV G+R++ R+R+GIGRPPG+M+P
Sbjct: 97 HIVVVHDELDIPFGTIRLKLGGGDNGHNGLRSVTAAL-GSRDYLRVRVGIGRPPGRMNPA 155
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
F+L+ F+A R+ + + + ++ LL +GL + F+
Sbjct: 156 DFVLRDFSAPERKELPFLVDRAADAVESLLDRGLEVTQNTFHV 198
>gi|429765477|ref|ZP_19297769.1| aminoacyl-tRNA hydrolase [Clostridium celatum DSM 1785]
gi|429186296|gb|EKY27247.1| aminoacyl-tRNA hydrolase [Clostridium celatum DSM 1785]
Length = 191
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 89/161 (55%), Gaps = 3/161 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D A+ I +N + K FG+G + V+L KP TYMNLSGES + +YK+
Sbjct: 26 VDYIADKYNIELNRIKFKGIFGEGLINGKKVILLKPTTYMNLSGESIREVVNFYKISNEE 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DD+ L G LR+R G HGGHNG+KS++ N G F R++IG+G P G + +
Sbjct: 86 IIVIYDDISLDVGRLRIREKGSHGGHNGIKSIIANL-GTDVFPRVKIGVGAPKGNL--VS 142
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+L KFN + L E + ++L + ++ FN
Sbjct: 143 HVLGKFNEEEINVLRKTLIATEEAVNVMLKNDVKDAMNKFN 183
>gi|336425952|ref|ZP_08605966.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 3_1_57FAA_CT1]
gi|336011417|gb|EGN41377.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 3_1_57FAA_CT1]
Length = 194
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 93/163 (57%), Gaps = 2/163 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PL 59
+IDA A+ GI + KA G+G++ V+LAKPQT+MNLSGES + YYK+ P
Sbjct: 25 VIDALADKYGIRVIERKHKALVGRGYIDGMKVVLAKPQTFMNLSGESIREIIDYYKVDPQ 84
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
++V DD+ L G LR+R G GGHNGLK+++ + G FAR+++G+G P D
Sbjct: 85 TELIVVCDDISLDLGQLRIRKKGSAGGHNGLKNIIAHL-GTDGFARIKMGVGNKPEGYDL 143
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F R+ +D + VE ++ KG E+ FN
Sbjct: 144 ADYVLGHFTGGERKIMDECIALAVEAAVTMMEKGPDEAMNRFN 186
>gi|333373028|ref|ZP_08464947.1| aminoacyl-tRNA hydrolase [Desmospora sp. 8437]
gi|332971075|gb|EGK10045.1| aminoacyl-tRNA hydrolase [Desmospora sp. 8437]
Length = 197
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 90/165 (54%), Gaps = 1/165 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D AE I + KA G+G V V+L KP+TYMNLSGES P + K +
Sbjct: 30 VVDRLAEEWKIPVEKERWKALVGEGRVNGEKVVLLKPETYMNLSGESVRPALEWLKCDVE 89
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV +DD+ LP G +RLR G GGH G++S++++ G +EF R++IGIGRP +
Sbjct: 90 SLLVIYDDLDLPPGRIRLRMKGSAGGHRGVQSLVDHL-GTQEFKRIKIGIGRPDVPIPIP 148
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQ 165
++L +F E I A++ E ++ + E FN Q
Sbjct: 149 DYVLSRFAREEEEPIAEAVERSAEAVQQWMEHPFPEVMNRFNRNQ 193
>gi|18311467|ref|NP_563401.1| peptidyl-tRNA hydrolase [Clostridium perfringens str. 13]
gi|110798942|ref|YP_697173.1| peptidyl-tRNA hydrolase [Clostridium perfringens ATCC 13124]
gi|168205745|ref|ZP_02631750.1| peptidyl-tRNA hydrolase [Clostridium perfringens E str. JGS1987]
gi|168209723|ref|ZP_02635348.1| peptidyl-tRNA hydrolase [Clostridium perfringens B str. ATCC 3626]
gi|168213409|ref|ZP_02639034.1| peptidyl-tRNA hydrolase [Clostridium perfringens CPE str. F4969]
gi|168217602|ref|ZP_02643227.1| peptidyl-tRNA hydrolase [Clostridium perfringens NCTC 8239]
gi|169343257|ref|ZP_02864268.1| peptidyl-tRNA hydrolase [Clostridium perfringens C str. JGS1495]
gi|182624327|ref|ZP_02952112.1| peptidyl-tRNA hydrolase [Clostridium perfringens D str. JGS1721]
gi|422347550|ref|ZP_16428461.1| peptidyl-tRNA hydrolase [Clostridium perfringens WAL-14572]
gi|422875430|ref|ZP_16921915.1| peptidyl-tRNA hydrolase [Clostridium perfringens F262]
gi|21263844|sp|Q8XHJ8.1|PTH_CLOPE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119390927|sp|Q0TMG7.1|PTH_CLOP1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|18146151|dbj|BAB82191.1| stage V sporulation protein C [Clostridium perfringens str. 13]
gi|110673589|gb|ABG82576.1| peptidyl-tRNA hydrolase [Clostridium perfringens ATCC 13124]
gi|169298555|gb|EDS80636.1| peptidyl-tRNA hydrolase [Clostridium perfringens C str. JGS1495]
gi|170662744|gb|EDT15427.1| peptidyl-tRNA hydrolase [Clostridium perfringens E str. JGS1987]
gi|170712152|gb|EDT24334.1| peptidyl-tRNA hydrolase [Clostridium perfringens B str. ATCC 3626]
gi|170715077|gb|EDT27259.1| peptidyl-tRNA hydrolase [Clostridium perfringens CPE str. F4969]
gi|177910545|gb|EDT72918.1| peptidyl-tRNA hydrolase [Clostridium perfringens D str. JGS1721]
gi|182380300|gb|EDT77779.1| peptidyl-tRNA hydrolase [Clostridium perfringens NCTC 8239]
gi|373223820|gb|EHP46164.1| peptidyl-tRNA hydrolase [Clostridium perfringens WAL-14572]
gi|380303610|gb|EIA15911.1| peptidyl-tRNA hydrolase [Clostridium perfringens F262]
Length = 188
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 93/164 (56%), Gaps = 3/164 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A I +N K G+GF+ + V+L KP TYMNLSGES LA +YKL +
Sbjct: 25 VIDYMANKYNIDVNREKFKGICGEGFIENKKVILLKPLTYMNLSGESIRELANFYKLEDD 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ L G LR+R G GGHNG+KS++ N G++ F R+++G+G+P +
Sbjct: 85 EIIVVYDDISLDIGRLRIREKGSAGGHNGIKSIIQNLGGDK-FPRVKVGVGQPKDNL--V 141
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTI 164
+L KF+ RE I+ + + + ++ ES FN +
Sbjct: 142 NHVLGKFSKEDREHIEKVIPVVSDAIVEIVKNDAKESMNKFNGV 185
>gi|312897815|ref|ZP_07757231.1| peptidyl-tRNA hydrolase [Megasphaera micronuciformis F0359]
gi|310621199|gb|EFQ04743.1| peptidyl-tRNA hydrolase [Megasphaera micronuciformis F0359]
Length = 187
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 85/162 (52%), Gaps = 2/162 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A G++ A V VLL KPQTYMN SG+S GPL +YK+
Sbjct: 23 VIDELARRWGVNTWQTRMDAEVAIANVDGEQVLLVKPQTYMNDSGKSVGPLMRWYKIDEK 82
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V V +DDM LP G LR+R NG GGHNG+KS+ N G R+F R R+GIGRP G MD
Sbjct: 83 DVYVVYDDMDLPIGKLRIRENGSDGGHNGIKSLFAN--GCRDFVRFRLGIGRPLGHMDVI 140
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+L F R+ E ++ L G+++ +N
Sbjct: 141 HHVLTPFPEEYRQTFADGAAYAAEAVEGCLKLGVSKGMNRYN 182
>gi|291518348|emb|CBK73569.1| peptidyl-tRNA hydrolase [Butyrivibrio fibrisolvens 16/4]
Length = 189
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 97/166 (58%), Gaps = 3/166 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PLN 60
IDA ++ GI +N K G+G + V+LAKPQTYMNLSGE PL YY++ P
Sbjct: 26 IDAISKKFGIEVNHKEHKGLVGKGIINGKKVILAKPQTYMNLSGECVLPLTDYYEIDPST 85
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V DD+ L G +R+R G GGHNGLK+++ G+ EF R+R+G+G D
Sbjct: 86 EMVVISDDVLLSTGNIRVRKKGSAGGHNGLKNII-ALIGSNEFPRIRVGVGECE-NGDMV 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 166
+ +L +++ RER+D ++++ + ++L L L + +N +K
Sbjct: 144 SHVLGRYDKEDRERVDASMEKVIGAVELFLDGDLDSAMNKYNVKEK 189
>gi|334128115|ref|ZP_08502014.1| aminoacyl-tRNA hydrolase [Centipeda periodontii DSM 2778]
gi|333388239|gb|EGK59421.1| aminoacyl-tRNA hydrolase [Centipeda periodontii DSM 2778]
Length = 212
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 87/140 (62%), Gaps = 1/140 (0%)
Query: 27 VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGG 86
+G V L KP TYMN SGE+ GP+ +YYK+ ++ + V HDDM +P G +R+R G GG
Sbjct: 51 IGGEKVFLVKPLTYMNNSGEALGPMLSYYKMDVDDLTVVHDDMDIPSGTVRIRRKGSSGG 110
Query: 87 HNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 146
HNG+KS++ + G+ +FAR+RIGIGRPP +L F+A +I A+ + +
Sbjct: 111 HNGIKSIIAHV-GSEDFARVRIGIGRPPAGWTVINHVLAPFSAEDAPKIRGAIDYLLPAV 169
Query: 147 KLLLSKGLTESARHFNTIQK 166
+ +++ G+ + H+N +K
Sbjct: 170 ECIVTNGVDFAMNHYNPHKK 189
>gi|375140499|ref|YP_005001148.1| peptidyl-tRNA hydrolase [Mycobacterium rhodesiae NBB3]
gi|359821120|gb|AEV73933.1| peptidyl-tRNA hydrolase [Mycobacterium rhodesiae NBB3]
Length = 192
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 88/137 (64%), Gaps = 4/137 (2%)
Query: 31 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 90
PV+LAKP+ YMN SG PLA +Y + ++V HD++ + G +RL+ GG GHNGL
Sbjct: 59 PVVLAKPRCYMNESGRQVAPLAKFYSVAPADIVVIHDELDIDFGRIRLKSGGGVAGHNGL 118
Query: 91 KSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 150
+S + + G+ EF R+RIGIGRPPG+M+ AF+L F + + + T ++ + +LLL
Sbjct: 119 RS-LGSALGSNEFQRVRIGIGRPPGRMEGAAFVLGTFTSAEWKEVPTICEQAADATELLL 177
Query: 151 SKGLTESARHFNTIQKY 167
S+GL E A+ NT+ +
Sbjct: 178 SQGL-EPAQ--NTVHAW 191
>gi|407984843|ref|ZP_11165451.1| peptidyl-tRNA hydrolase [Mycobacterium hassiacum DSM 44199]
gi|407373678|gb|EKF22686.1| peptidyl-tRNA hydrolase [Mycobacterium hassiacum DSM 44199]
Length = 186
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 86/143 (60%), Gaps = 4/143 (2%)
Query: 25 GFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGH 84
G +G V++AKP+ YMN SG GPLA +Y +P V++ HD++ + G +RL+ GG
Sbjct: 47 GRLGGRSVVVAKPRCYMNESGRQVGPLAKFYSVPPADVIIIHDELDIDFGRIRLKFGGGV 106
Query: 85 GGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVE 144
GHNGL+SV + G +F R+R+GIGRPPG+MD F+L F A + + T ++ +
Sbjct: 107 AGHNGLRSVSSAL-GTNDFHRVRVGIGRPPGRMDGARFVLSPFTAAEWKEVPTICEQAAD 165
Query: 145 VLKLLLSKGLTESARHFNTIQKY 167
+LL+ GL + NT+ +
Sbjct: 166 ATELLVQHGLVAAQ---NTVHAW 185
>gi|399888053|ref|ZP_10773930.1| peptidyl-tRNA hydrolase [Clostridium arbusti SL206]
Length = 187
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 97/165 (58%), Gaps = 3/165 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D ++ I+MN K +G G + D V+L KP T+MNLSGES + +YK+
Sbjct: 25 ILDLISDKYNINMNRTKFKGVYGDGKIDDERVILLKPATFMNLSGESVKAVCDFYKIKNE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ L G +R+R +G GGHNG+K++++N + F R+++G+G P G D
Sbjct: 85 NIIVIYDDISLSVGRMRIRKSGSAGGHNGIKNIISNLSSDV-FPRVKVGVGAPIG--DLI 141
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQ 165
+ +L +F+ R ++ + ++ +++KG E+ +FN I+
Sbjct: 142 SHVLGRFSTEDRIEVEKVFNVAADAVQCIITKGTCEAMNNFNGIK 186
>gi|300115102|ref|YP_003761677.1| peptidyl-tRNA hydrolase [Nitrosococcus watsonii C-113]
gi|299541039|gb|ADJ29356.1| peptidyl-tRNA hydrolase [Nitrosococcus watsonii C-113]
Length = 193
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 95/168 (56%), Gaps = 17/168 (10%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAP--------VLLAKPQTYMNLSGESTGPLA 52
+DA A GI G F GD + L KP T+MN SG++ L
Sbjct: 29 WLDAVASELGIDFKP-------GAKFFGDYARAHWRGHDLWLLKPTTFMNRSGQAVLALL 81
Query: 53 AYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGR 112
YY++PL R+L+ HDD+ LP G+ +L+ GGHGGHNGL+ ++N G R+F RLR+G+G
Sbjct: 82 NYYQIPLERLLIAHDDLDLPPGIAKLKRTGGHGGHNGLRDIINRL-GRRDFLRLRLGVGH 140
Query: 113 PPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARH 160
P D +++L + + R+ I+TA+ G EVL +L+ G TE A H
Sbjct: 141 PGSGQDVVSYVLNRPSREDRQAIETAIGAGFEVLPEVLA-GDTEKAMH 187
>gi|404421907|ref|ZP_11003612.1| peptidyl-tRNA hydrolase [Mycobacterium fortuitum subsp. fortuitum
DSM 46621]
gi|403658493|gb|EJZ13221.1| peptidyl-tRNA hydrolase [Mycobacterium fortuitum subsp. fortuitum
DSM 46621]
Length = 191
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/143 (44%), Positives = 97/143 (67%), Gaps = 4/143 (2%)
Query: 25 GFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGH 84
G + APV+LAKP+ YMN SG GPLA +Y +P R++V HD++ + G +RL+ GG
Sbjct: 53 GRLAGAPVVLAKPRCYMNESGRQVGPLAKFYSVPPGRIVVIHDELDIDFGRIRLKVGGGE 112
Query: 85 GGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVE 144
GGHNGL+SV + G+++F R+RIG+GRPPG+ DP AF+L+ F A R + T ++ +
Sbjct: 113 GGHNGLRSVASAL-GSKDFQRVRIGVGRPPGRKDPAAFVLEAFTAAERTELPTICEQAAD 171
Query: 145 VLKLLLSKGLTESARHFNTIQKY 167
+LL+++GL E A+ NT+ +
Sbjct: 172 ATELLIAQGL-EPAQ--NTVHAW 191
>gi|392958406|ref|ZP_10323918.1| peptidyl-tRNA hydrolase [Bacillus macauensis ZFHKF-1]
gi|391875576|gb|EIT84184.1| peptidyl-tRNA hydrolase [Bacillus macauensis ZFHKF-1]
Length = 186
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 83/162 (51%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID ++ GI +N +G G V V L KP TYMNLSGES P Y+KL +
Sbjct: 25 VIDELSKRFGIELNQAKFNGLYGSGMVNGEKVYLLKPLTYMNLSGESVRPFMDYFKLDVE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+ V +DD+ +PCG LRLR G GGHNG+KS++ + G F R+R GIGRP +
Sbjct: 85 DLAVIYDDLDMPCGKLRLRQKGSAGGHNGMKSLIQHL-GTDTFNRVRFGIGRPTNRQPVP 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
F+L F E + + + + + + L FN
Sbjct: 144 DFVLSTFAKAEEEAVASLVTKSADACEAFLEMPFNRVMNAFN 185
>gi|348176914|ref|ZP_08883808.1| peptidyl-tRNA hydrolase [Saccharopolyspora spinosa NRRL 18395]
Length = 191
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 91/162 (56%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ D A+ G A +G + A +L KP+++MNLSG +YK P
Sbjct: 31 VADELADRIGGKFKAHKAGAEVVEGRLAGARAVLVKPRSFMNLSGGPVAGAVKFYKAPPE 90
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V HD++ LP G +RL+ GG GHNGL+S+ + G R++ R+R GIGRPPG+MDP
Sbjct: 91 SLIVIHDELDLPFGTIRLKRGGGENGHNGLRSISKSL-GTRDYVRVRFGIGRPPGRMDPA 149
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L+ F+ R+ + + + ++ L++KGL + F+
Sbjct: 150 DYVLKDFSGTERKELAYFIDVCADAVEALVTKGLEAAQNQFH 191
>gi|443320067|ref|ZP_21049195.1| peptidyl-tRNA hydrolase [Gloeocapsa sp. PCC 73106]
gi|442790219|gb|ELR99824.1| peptidyl-tRNA hydrolase [Gloeocapsa sp. PCC 73106]
Length = 192
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 99/164 (60%), Gaps = 5/164 (3%)
Query: 1 MIDAFAESQGISMNTV-HCKATFGQGFV-GDAPVLLAKPQTYMNLSGESTGPLAAYYKLP 58
++D A++ G+S + F +G G V L KP TYMNLSG+S + +YKLP
Sbjct: 27 VLDTLAQAWGLSWQEEKRFQGLFSEGKARGGKKVYLLKPLTYMNLSGQSVRAVVDWYKLP 86
Query: 59 LNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMD 118
+ +LV +DD+ LP G LRLR +G GGHNG+KS++ + G ++F+RLRIGIG+ +
Sbjct: 87 TDSLLVVYDDLDLPVGRLRLRRSGSAGGHNGMKSIIAHL-GGQDFSRLRIGIGK--SNVP 143
Query: 119 PKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+ +L KF ++ ID ++ + VL+L L +GL ++ +N
Sbjct: 144 TISHVLGKFTPSEKKAIDEVMKVTIAVLELSLKEGLDQAMNQYN 187
>gi|329925502|ref|ZP_08280376.1| aminoacyl-tRNA hydrolase [Paenibacillus sp. HGF5]
gi|328939785|gb|EGG36125.1| aminoacyl-tRNA hydrolase [Paenibacillus sp. HGF5]
Length = 187
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 88/161 (54%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+DA AE G+ N CK+ +G +G +L KP T+MNLSGE+ YYK+ L
Sbjct: 26 LDALAERHGLKFNQNKCKSVIAEGMIGGTKTVLIKPMTFMNLSGEAVRAYMDYYKVSLED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DD+ G +RLR+ G GGHNG+KS++ + G + F R+R+GI RP
Sbjct: 86 MIVVYDDLDTVVGKIRLRYQGSAGGHNGIKSIIQH-TGTQSFNRVRMGISRPEPGYAIVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F RE++ ++E + L+ L ++ FN
Sbjct: 145 YVLGTFPKKEREQLQHMVEETCDALEFSLDHTFEQTMAKFN 185
>gi|347524854|ref|YP_004831602.1| peptidyl-tRNA hydrolase [Lactobacillus ruminis ATCC 27782]
gi|345283813|gb|AEN77666.1| Peptidyl-tRNA hydrolase [Lactobacillus ruminis ATCC 27782]
Length = 187
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 78/150 (52%), Gaps = 2/150 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID FAE N A G + V+LAKP TYMN SG S + +YKL
Sbjct: 26 IDRFAEKHAFEFNKQKFDAMIADGIINGEKVILAKPTTYMNESGRSVRQIVDFYKLDPED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
VL+ HDDM L G LRLR G GGHNG+KS++ + G +F RLRIGI P Q
Sbjct: 86 VLIVHDDMDLATGRLRLRQKGSAGGHNGIKSIIAHL-GTEKFKRLRIGIDHPAKQK-VVD 143
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLS 151
++L +F++ R D + E V+ + L
Sbjct: 144 WVLTRFSSDQRTEFDVGMNEAVDAIDDWLE 173
>gi|325678539|ref|ZP_08158150.1| aminoacyl-tRNA hydrolase [Ruminococcus albus 8]
gi|324109758|gb|EGC03963.1| aminoacyl-tRNA hydrolase [Ruminococcus albus 8]
Length = 208
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 95/163 (58%), Gaps = 2/163 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+DA + G S KA G +G L+ KP+T+MNLSG++ +YK+P+
Sbjct: 47 VDALEKKLGFSCERRKFKAKVGNTVIGGKNCLVMKPETFMNLSGDAVSEAMDFYKIPIEN 106
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPG-QMDPK 120
V+V DD+ L G LR+R G GGHNG+KS++ G+ +F R+++G+G+ P D
Sbjct: 107 VIVIFDDISLEPGQLRIRRKGSAGGHNGIKSIIAQC-GSEDFPRIKLGVGKKPNPAYDLA 165
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F+ R++ID A ++ + L+L+++ + E+ FN+
Sbjct: 166 KWVLGRFSEDDRKKIDIAAEKACDALELMVNGKIDEAMSRFNS 208
>gi|289579381|ref|YP_003478008.1| peptidyl-tRNA hydrolase [Thermoanaerobacter italicus Ab9]
gi|289529094|gb|ADD03446.1| peptidyl-tRNA hydrolase [Thermoanaerobacter italicus Ab9]
Length = 189
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 95/166 (57%), Gaps = 3/166 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ GI++ + K+ G+ + ++L KPQT+MN SGE+ +YK+PL
Sbjct: 25 VIDELAKKLGINVTKLKFKSLMGEDYFKGEKIILLKPQTFMNSSGEALYEAVNFYKIPLE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V+V +DD L G +R+R G GGHNG+ S++ + EF R+RIGIG+P Q D
Sbjct: 85 NVIVIYDDKDLDVGKIRIRKKGSSGGHNGMNSII-YLLNSEEFPRVRIGIGKP--QKDLV 141
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 166
+ +L KF ++ ID A+ + + + ++ G+ + FN +QK
Sbjct: 142 SHVLGKFEESEKKLIDEAVIKAADAVIDIIENGIEHAMSKFNGLQK 187
>gi|260584472|ref|ZP_05852219.1| aminoacyl-tRNA hydrolase [Granulicatella elegans ATCC 700633]
gi|260157990|gb|EEW93059.1| aminoacyl-tRNA hydrolase [Granulicatella elegans ATCC 700633]
Length = 186
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 86/146 (58%), Gaps = 1/146 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D FA + + N ATF Q + V+L KP TYMNLSG++ PL Y+K+ +
Sbjct: 26 VDEFAYQEKLEFNQALFDATFTQTHIDGEKVILMKPLTYMNLSGQAVRPLMNYFKIGIED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DDM LP G +RLR G GGHNG+KS+++ G+ +F R++IG+GRP
Sbjct: 86 IVVLYDDMDLPVGKIRLRQKGSAGGHNGIKSIISCL-GSDQFNRIKIGVGRPAPGRSVVN 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLK 147
+L F +E I +++ + VE L+
Sbjct: 145 HVLANFEKEEQEEILSSVSKSVEALR 170
>gi|160895087|ref|ZP_02075861.1| hypothetical protein CLOL250_02638 [Clostridium sp. L2-50]
gi|156863518|gb|EDO56949.1| aminoacyl-tRNA hydrolase [Clostridium sp. L2-50]
Length = 185
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 90/162 (55%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+I A+ I ++ KA +G+G + V+LA PQT+MNLSGES L YYK +
Sbjct: 25 VIVGLADKYNIELSEKKHKAIYGRGMIEGEKVILAMPQTFMNLSGESVRELVDYYKCDPS 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V+V +DD+ L G LR+R G GGHNG+K+++++ G +EF R+R+GIG+ P +MD
Sbjct: 85 DVIVAYDDIDLAVGKLRIREKGSAGGHNGMKNIISHL-GTQEFVRVRVGIGKKPDRMDLA 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F I + + L+L + +N
Sbjct: 144 DYVLSRFGKDELPEIKAGCDNAGDAIALILKDSAAAAMNKYN 185
>gi|304315713|ref|YP_003850858.1| peptidyl-tRNA hydrolase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|433653904|ref|YP_007297612.1| peptidyl-tRNA hydrolase [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|302777215|gb|ADL67774.1| peptidyl-tRNA hydrolase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|433292093|gb|AGB17915.1| peptidyl-tRNA hydrolase [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 190
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 93/162 (57%), Gaps = 3/162 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID +E I++ + K+ G+G + V+L KPQTYMN SGE+ + +YKLPL+
Sbjct: 25 VIDDLSEKLNIAVKKLRFKSLIGEGIYKEEKVILQKPQTYMNSSGEAVYDIVNFYKLPLS 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD L G +R+R G GGHNG+KS++ + +F R+R+GIG+P G M
Sbjct: 85 NLIVVYDDKDLDVGKIRIRKKGSSGGHNGMKSII-YLLNSEDFPRVRVGIGKPKGDM--I 141
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+L +FN + +D ++ + + ++ G+ + FN
Sbjct: 142 EHVLGRFNESDKTIVDNSIDRAADAIIDIIENGVEHAMNLFN 183
>gi|238019603|ref|ZP_04600029.1| hypothetical protein VEIDISOL_01472 [Veillonella dispar ATCC 17748]
gi|237863801|gb|EEP65091.1| hypothetical protein VEIDISOL_01472 [Veillonella dispar ATCC 17748]
Length = 192
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 91/162 (56%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+IDA A+S + +A V VLL KPQT+MN SGES GPL YYK+ +
Sbjct: 25 VIDAIADSVPHTPWKEEQRAEVCSITVDGEKVLLVKPQTFMNASGESVGPLMRYYKIDPS 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V +DDM LP G LR+R NG GGHNG+KS++++ G F R R+GIGRP Q
Sbjct: 85 DVYCIYDDMDLPVGKLRIRPNGSSGGHNGIKSLISHI-GTENFPRFRVGIGRPLPQWTVI 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+L F+ ++E++ +++ V+ + L G+ + FN
Sbjct: 144 DHVLAPFSEESQEKVQKGIKDTVKAVLGTLEVGIDKGMNLFN 185
>gi|357018984|ref|ZP_09081244.1| peptidyl-tRNA hydrolase [Mycobacterium thermoresistibile ATCC
19527]
gi|356481305|gb|EHI14413.1| peptidyl-tRNA hydrolase [Mycobacterium thermoresistibile ATCC
19527]
Length = 197
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 82/137 (59%), Gaps = 4/137 (2%)
Query: 31 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 90
PV+LAKP+ YMN SG GPLA +Y + ++V HD++ L G +RL+ GG GHNGL
Sbjct: 65 PVILAKPRCYMNESGRQVGPLAKFYSVAPADIVVIHDELDLEFGRIRLKFGGGVAGHNGL 124
Query: 91 KSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 150
+SV G +EF R+RIGIGRPPG+ ++LQ F+A R + T ++ +LLL
Sbjct: 125 RSVSAAL-GTQEFHRVRIGIGRPPGRKSAADYVLQNFSAAERGEVPTICEQAAHATELLL 183
Query: 151 SKGLTESARHFNTIQKY 167
GL + NT+ +
Sbjct: 184 EHGLEPAQ---NTVHAW 197
>gi|323701606|ref|ZP_08113278.1| peptidyl-tRNA hydrolase [Desulfotomaculum nigrificans DSM 574]
gi|333922333|ref|YP_004495913.1| peptidyl-tRNA hydrolase [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|323533379|gb|EGB23246.1| peptidyl-tRNA hydrolase [Desulfotomaculum nigrificans DSM 574]
gi|333747894|gb|AEF93001.1| Peptidyl-tRNA hydrolase [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 200
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 94/165 (56%), Gaps = 5/165 (3%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+IDA A GI + KA GQ ++G ++LAKPQTYMNLSG++ L +YKL
Sbjct: 25 VIDALARDLGIVVEKNQHKALTGQAYLGREKLILAKPQTYMNLSGQAVVALMNWYKLQPV 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPP-GQMDP 119
+LV +DDM LP G LR+R +G GG G+KS++ G +EF R+++GIGRP G +D
Sbjct: 85 DLLVIYDDMDLPPGRLRIRQSGSAGGQKGMKSII-ELLGTQEFTRMKVGIGRPEHGAID- 142
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTI 164
+L K + I+ A+ VE K+ + G + FN +
Sbjct: 143 --HVLGKIDDQEAALINPAIMAAVEAAKVWVLDGAPAAMNKFNRV 185
>gi|389819103|ref|ZP_10209144.1| peptidyl-tRNA hydrolase [Planococcus antarcticus DSM 14505]
gi|388463518|gb|EIM05870.1| peptidyl-tRNA hydrolase [Planococcus antarcticus DSM 14505]
Length = 187
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 85/162 (52%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A + K + + V+L KP TYMNLSGE+ L YY + L
Sbjct: 25 VVDYLASQWNAPLTQSKFKGMYSISHRPEGKVMLLKPLTYMNLSGETVSALMDYYGIELK 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ LP G LRLR G GGHNG+KS++ + G +EF RLRIGI RPP M
Sbjct: 85 DIIVIYDDLDLPAGQLRLRQKGSAGGHNGIKSLIQHL-GTQEFNRLRIGISRPPAGMKVP 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++LQ+F+ + A+++ + L K E FN
Sbjct: 144 DYVLQRFSKEEIPEVADAIKKSAAACETWLFKPYLEVMNQFN 185
>gi|261403913|ref|YP_003240154.1| peptidyl-tRNA hydrolase [Paenibacillus sp. Y412MC10]
gi|261280376|gb|ACX62347.1| peptidyl-tRNA hydrolase [Paenibacillus sp. Y412MC10]
Length = 187
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 88/161 (54%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+DA AE G+ N CK+ +G +G +L KP T+MNLSGE+ YYK+ L
Sbjct: 26 LDALAERHGLKFNQNKCKSVIAEGMIGGTKTVLIKPMTFMNLSGEAVRAYMDYYKVSLED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DD+ G +RLR+ G GGHNG+KS++ + G + F R+R+GI RP
Sbjct: 86 MIVVYDDLDTVVGKIRLRYQGSAGGHNGIKSIIQH-TGTQSFNRVRMGISRPEPGYAIVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F RE++ ++E + L+ L ++ FN
Sbjct: 145 YVLGTFPKKEREQLQHMVEETCDALEFSLGHTFEQTMAKFN 185
>gi|354585793|ref|ZP_09004624.1| peptidyl-tRNA hydrolase [Paenibacillus lactis 154]
gi|353184118|gb|EHB49646.1| peptidyl-tRNA hydrolase [Paenibacillus lactis 154]
Length = 187
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 87/161 (54%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+DA AE G+ N CK+ +G +G +L KP T+MNLSGE+ YYK PL
Sbjct: 26 LDALAERHGMKFNQSKCKSVIAEGMIGGTKTVLIKPMTFMNLSGEAVRAYMDYYKAPLED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DD+ G +RLR+ G GGHNG+KS++ + G + F R+R+GI RP
Sbjct: 86 MIVVYDDLDTAVGKIRLRYQGSAGGHNGIKSIIQH-TGTQTFNRVRMGISRPEPGYAIVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F RE++ + + + L+ L ++ FN
Sbjct: 145 YVLGAFPKGEREQLQSMVDMTCDALEFSLDHTFEQTMAKFN 185
>gi|86608210|ref|YP_476972.1| peptidyl-tRNA hydrolase [Synechococcus sp. JA-2-3B'a(2-13)]
gi|119391025|sp|Q2JNF7.1|PTH_SYNJB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|86556752|gb|ABD01709.1| peptidyl-tRNA hydrolase [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 224
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 93/165 (56%), Gaps = 2/165 (1%)
Query: 1 MIDAFAESQGISMN-TVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPL 59
++D A+ GI + + ++G+GF L KP+TYMN SG+S + +YKL L
Sbjct: 38 VVDRLAQRWGIPLVLEKRFQGSYGEGFALGGKRRLLKPETYMNRSGQSVRAVLDWYKLDL 97
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
VLV +DDM LP G LRLR +G GGHNG+KS++ + G+ F RLR+G+G+P G D
Sbjct: 98 ASVLVVYDDMDLPLGRLRLRGSGSAGGHNGMKSIIQHL-GSEAFPRLRLGVGKPKGSQDV 156
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTI 164
+L F +E ++ L VE ++ +GL + FN +
Sbjct: 157 VGHVLGGFAPAEQEVLERVLDVAVEAVECCWQEGLRTAMNRFNPL 201
>gi|225375821|ref|ZP_03753042.1| hypothetical protein ROSEINA2194_01453 [Roseburia inulinivorans DSM
16841]
gi|225212256|gb|EEG94610.1| hypothetical protein ROSEINA2194_01453 [Roseburia inulinivorans DSM
16841]
Length = 198
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 97/167 (58%), Gaps = 2/167 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PL 59
++DA A+ IS++ KA G+G + V+LAKPQTYMNLSGES L YYKL P
Sbjct: 33 VMDALADKYNISISENKHKALCGKGVIEGMKVVLAKPQTYMNLSGESVAELVNYYKLDPE 92
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
+ ++V DD+ L G +R+R G GGHNG+K+++ G + F R+++G+G P D
Sbjct: 93 SELIVVFDDISLEPGNIRIRKKGSAGGHNGIKNII-AMTGTQNFMRIKVGVGEKPKGWDL 151
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 166
++L F+ R +++ A+ ++ L++ + ++ +N+ K
Sbjct: 152 ADYVLGHFSTEDRAKVEEAIGHAMDATVLMMQGEVDKAMNDYNSKNK 198
>gi|392423512|ref|YP_006464506.1| peptidyl-tRNA hydrolase [Desulfosporosinus acidiphilus SJ4]
gi|391353475|gb|AFM39174.1| peptidyl-tRNA hydrolase [Desulfosporosinus acidiphilus SJ4]
Length = 185
Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 83/151 (54%), Gaps = 2/151 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
ID AE+ G+ T + + +G V +LL KP T+MNLSG S L +YK+
Sbjct: 25 FIDGLAEALGLQFRT-KFQGLWTEGSVQGERLLLLKPHTFMNLSGRSVRELVNFYKIAPE 83
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+L+ HDDM LP G LRLR +G GGHNG+KS+M G F RL++G+GRPP + DP
Sbjct: 84 DILIVHDDMDLPLGKLRLRDHGSAGGHNGIKSIMAEL-GTETFWRLKLGVGRPPKEWDPA 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
++L F I+ L+ + L L
Sbjct: 143 RYVLSPFGETELPAIEDLLERAEKAAGLWLK 173
>gi|297545522|ref|YP_003677824.1| peptidyl-tRNA hydrolase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296843297|gb|ADH61813.1| peptidyl-tRNA hydrolase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 189
Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 95/166 (57%), Gaps = 3/166 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ GI++ + K+ G+ + ++L KPQT+MN SGE+ +YK+PL
Sbjct: 25 VIDELAKKLGINVTKLKFKSLMGEDYFKGEKIILLKPQTFMNSSGEALYEAVNFYKIPLE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V++ +DD L G +R+R G GGHNG+ S++ + EF R+RIGIG+P Q D
Sbjct: 85 NVIIIYDDKDLDVGKIRIRKKGSSGGHNGMNSII-YLLNSEEFPRVRIGIGKP--QKDLV 141
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 166
+ +L KF ++ ID A+ + + + ++ G+ + FN +QK
Sbjct: 142 SHVLGKFEESEKKLIDEAVIKAADAVIDIIENGIEHAMSKFNGLQK 187
>gi|425738705|ref|ZP_18856962.1| peptidyl-tRNA hydrolase [Staphylococcus massiliensis S46]
gi|425478976|gb|EKU46158.1| peptidyl-tRNA hydrolase [Staphylococcus massiliensis S46]
Length = 190
Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 93/167 (55%), Gaps = 6/167 (3%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID E +++ + + +GD V+L +P T MNLSGE+ GPL YY + +
Sbjct: 25 VIDWLLERHNFNLDKQKFRGAYTIERMGDEKVMLIEPMTLMNLSGEAVGPLMDYYGVEVE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV +DDM L G +RLR G GGHNG+KS++ + G EF R+RIGIGRP M
Sbjct: 85 DLLVLYDDMDLEQGQIRLRQKGSAGGHNGMKSLIQHL-GTNEFKRVRIGIGRPTNGMSVP 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKY 167
++LQKF++ + +D ++ ++ + E++R + + Y
Sbjct: 144 DYVLQKFSSDEMKTMDKVIEHSARAVETFI-----ETSRFDHVMNNY 185
>gi|304405855|ref|ZP_07387513.1| peptidyl-tRNA hydrolase [Paenibacillus curdlanolyticus YK9]
gi|304345098|gb|EFM10934.1| peptidyl-tRNA hydrolase [Paenibacillus curdlanolyticus YK9]
Length = 186
Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 90/161 (55%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID+ A+ GIS+ CKA G+G VG V L KP TYMNLSGE+ YYK+ L
Sbjct: 26 IDSLAKRWGISVTQSKCKALIGEGNVGGTKVALIKPMTYMNLSGETVRAYMDYYKVALED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DD+ G +RLR+ G GGHNG+KS++ + G + F R+R+GI RP +
Sbjct: 86 LIVIYDDLDTEMGRIRLRYQGSPGGHNGIKSIIQH-TGTQTFNRIRMGITRPLPGGNIAD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F ++++ +++ + + L ++ FN
Sbjct: 145 YVLDNFPKAEQDKLAIMIEQTCDAAEFALKATFEQTMAKFN 185
>gi|323340105|ref|ZP_08080370.1| aminoacyl-tRNA hydrolase [Lactobacillus ruminis ATCC 25644]
gi|417974648|ref|ZP_12615455.1| peptidyl-tRNA hydrolase [Lactobacillus ruminis ATCC 25644]
gi|323092482|gb|EFZ35089.1| aminoacyl-tRNA hydrolase [Lactobacillus ruminis ATCC 25644]
gi|346328992|gb|EGX97304.1| peptidyl-tRNA hydrolase [Lactobacillus ruminis ATCC 25644]
Length = 187
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 78/150 (52%), Gaps = 2/150 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID FAE N A G + V+LAKP TYMN SG S + +YKL
Sbjct: 26 IDRFAEKHAFEFNKQKFDAMIADGIINGEKVILAKPTTYMNESGRSVRQIVDFYKLNPED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
VL+ HDDM L G LRLR G GGHNG+KS++ + G +F RLRIGI P Q
Sbjct: 86 VLIVHDDMDLATGRLRLRQKGSAGGHNGIKSIIAHL-GTEKFKRLRIGIDHPAKQK-VVD 143
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLS 151
++L +F++ R D + E V+ + L
Sbjct: 144 WVLTRFSSDQRTEFDVGMNEAVDAIDDWLE 173
>gi|402570690|ref|YP_006620033.1| peptidyl-tRNA hydrolase [Desulfosporosinus meridiei DSM 13257]
gi|402251887|gb|AFQ42162.1| peptidyl-tRNA hydrolase [Desulfosporosinus meridiei DSM 13257]
Length = 185
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 81/140 (57%), Gaps = 2/140 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID AE + + + +G + + L KPQT+MNLSG S L +YK+PL+
Sbjct: 25 LIDLIAEVHNLQFRS-KFQGLVAEGQIEGERLFLLKPQTFMNLSGRSVAELIKFYKIPLD 83
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+L+ DDM LP G LRLR G GGHNG+KS+ G+ + RL++G+GRPP + DP
Sbjct: 84 DLLIVQDDMDLPLGKLRLRDQGSAGGHNGIKSIQGEL-GSEKLWRLKLGVGRPPKEWDPA 142
Query: 121 AFLLQKFNAIARERIDTALQ 140
++L F+ + +D L+
Sbjct: 143 RYVLAPFSDDESQMLDDVLE 162
>gi|335998475|ref|ZP_08564386.1| peptidyl-tRNA hydrolase [Lactobacillus ruminis SPM0211]
gi|335348330|gb|EGM49836.1| peptidyl-tRNA hydrolase [Lactobacillus ruminis SPM0211]
Length = 187
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 78/150 (52%), Gaps = 2/150 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D FAE N A G + V+LAKP TYMN SG S + +YKL
Sbjct: 26 VDRFAEKHAFEFNKQKFDAMIADGIINGEKVILAKPTTYMNESGRSVRQIVDFYKLDPED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
VL+ HDDM L G LRLR G GGHNG+KS++ + G +F RLRIGI P Q
Sbjct: 86 VLIVHDDMDLATGRLRLRQKGSAGGHNGIKSIIAHL-GTEKFKRLRIGIDHPAKQK-VVD 143
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLS 151
++L +F++ R D + E V+ + L
Sbjct: 144 WVLTRFSSDQRTEFDVGMNEAVDAIDDWLE 173
>gi|389576690|ref|ZP_10166718.1| peptidyl-tRNA hydrolase [Eubacterium cellulosolvens 6]
gi|389312175|gb|EIM57108.1| peptidyl-tRNA hydrolase [Eubacterium cellulosolvens 6]
Length = 189
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 89/162 (54%), Gaps = 2/162 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PLN 60
I + I KA +G+G +G V+L KP TYMNLSGES YYK+ P +
Sbjct: 26 ITELVDRWNIPQGGTDMKAMYGKGLIGGQKVMLIKPLTYMNLSGESIAAYVNYYKVDPES 85
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV +DD+ L G LR+R G GGHNG+K+++ + G +FAR+R+GIG P D
Sbjct: 86 ELLVIYDDISLDPGQLRIRKKGSAGGHNGMKNIIQHL-GTDKFARIRVGIGDKPAGWDLA 144
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F+ RE +D + + +++++ + + FN
Sbjct: 145 DYVLAPFSKADRELVDAGIGRAADAAEMIVAGEIDRAMNTFN 186
>gi|433445433|ref|ZP_20409840.1| peptidyl-tRNA hydrolase [Anoxybacillus flavithermus TNO-09.006]
gi|432001081|gb|ELK21966.1| peptidyl-tRNA hydrolase [Anoxybacillus flavithermus TNO-09.006]
Length = 187
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 89/162 (54%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A G + N + F G + V+L KP TYMNLSGE PL YY + ++
Sbjct: 26 VIDELARRWGFTFNQTKFQGIFASGVISGEKVILCKPLTYMNLSGECVRPLMDYYNIDVD 85
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ L G +RLR G GGHNG+KS++++ + +F R+RIGI RP M
Sbjct: 86 DLIVIYDDLDLSTGTVRLRPKGSAGGHNGMKSLIHHLK-TEQFKRIRIGIDRPKNGMRVS 144
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L ++ A + +I+ A+++ + + L + FN
Sbjct: 145 DYVLGRWTAEEKIQIEQAIKKAADACERSLHVPFAQVMNEFN 186
>gi|325288388|ref|YP_004264569.1| peptidyl-tRNA hydrolase [Syntrophobotulus glycolicus DSM 8271]
gi|324963789|gb|ADY54568.1| peptidyl-tRNA hydrolase [Syntrophobotulus glycolicus DSM 8271]
Length = 185
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 82/132 (62%), Gaps = 1/132 (0%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
++L KP T+MNLSG+S L YYK+PL +LV HDDM + G LR R G GGHNG+K
Sbjct: 55 IILLKPYTFMNLSGQSVAELINYYKVPLEDMLVIHDDMDIALGRLRFREKGSAGGHNGIK 114
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S++ G +EF RL+IG+GRP + D + +L F+ +RE + L++ + + L L
Sbjct: 115 SIIQEL-GTQEFWRLKIGVGRPQKERDVVSHVLSGFDRESREVLSETLEKARKAVFLWLE 173
Query: 152 KGLTESARHFNT 163
E+ +++N+
Sbjct: 174 GKEAEAMQNYNS 185
>gi|28209961|ref|NP_780905.1| peptidyl-tRNA hydrolase [Clostridium tetani E88]
gi|46576800|sp|Q899I4.1|PTH_CLOTE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|28202396|gb|AAO34842.1| peptidyl-tRNA hydrolase [Clostridium tetani E88]
Length = 188
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 92/164 (56%), Gaps = 3/164 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D + I + K FG G + + V+L KP TYMNLSGES + YY +P+
Sbjct: 26 VDKISYEYNIPIKRERFKGVFGDGRISNEKVILLKPTTYMNLSGESLREIIEYYNIPITN 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
V+V +DD+ L G LR+R G GGHNG+KS++ N + +F RLRIG+G+P Q D +
Sbjct: 86 VIVIYDDVDLEVGRLRIRTKGSAGGHNGIKSIIYNL-NSEDFIRLRIGVGKP--QRDMVS 142
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQ 165
+L KF + I+ L+ E+ ++++G E+ +N +
Sbjct: 143 HVLGKFAKEDEKNIEEVLKIIPELAYTIINQGPQEAMNKYNNFR 186
>gi|259047961|ref|ZP_05738362.1| aminoacyl-tRNA hydrolase [Granulicatella adiacens ATCC 49175]
gi|259035381|gb|EEW36636.1| aminoacyl-tRNA hydrolase [Granulicatella adiacens ATCC 49175]
Length = 203
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 89/162 (54%), Gaps = 2/162 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D A + + A F QG +G V+ KP T+MNLSGE+ PL YYK+ +
Sbjct: 43 MDEVAYQEKFDFDKALFDAVFAQGQMGGEKVIFMKPLTFMNLSGEAIRPLMNYYKIGIED 102
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+LV +DDM LP G +RLR G GGHNG+KS+++ G EF R+++G+GRP
Sbjct: 103 LLVVYDDMDLPVGKIRLRQKGSAGGHNGMKSIISCL-GTSEFNRIKVGVGRPKEGRTVVG 161
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLL-SKGLTESARHFN 162
+L +F E I A+Q+ V+ ++ + + ++ FN
Sbjct: 162 HVLNRFEKEEEEDIIFAVQKSVDAIRSWIDTDDFVKTMNQFN 203
>gi|387131036|ref|YP_006293926.1| peptidyl-tRNA hydrolase [Methylophaga sp. JAM7]
gi|386272325|gb|AFJ03239.1| Peptidyl-tRNA hydrolase [Methylophaga sp. JAM7]
Length = 191
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 90/160 (56%), Gaps = 5/160 (3%)
Query: 1 MIDAFAESQGISMNTVH-CKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPL 59
M+D FAE G+S T + + Q + A L KP T+MN SG+S LA +YK+P
Sbjct: 27 MLDQFAEQAGLSFKTDNRFQGELVQQIMPQAKFWLLKPLTFMNRSGQSVAALANFYKIPP 86
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
R++V HD++ LP G +RL+ +GGHGGHNGL+ ++ G ++F R RIGIG P
Sbjct: 87 ERIVVLHDELDLPTGTVRLKKSGGHGGHNGLRDIIAQLGGQKDFLRCRIGIGHPGNSRQV 146
Query: 120 KAFLLQKFNAIARER----IDTALQEGVEVLKLLLSKGLT 155
++L + + R++ ID A+Q +V L K +
Sbjct: 147 SDYVLSRPSPDDRQQIMHGIDAAIQALPDVFNNQLDKAMN 186
>gi|427394339|ref|ZP_18887776.1| peptidyl-tRNA hydrolase [Alloiococcus otitis ATCC 51267]
gi|425730028|gb|EKU92875.1| peptidyl-tRNA hydrolase [Alloiococcus otitis ATCC 51267]
Length = 187
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 81/127 (63%), Gaps = 2/127 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPL-N 60
+D A G++ N ++ + +G +G V L KPQT+MNLSG+S P YY L +
Sbjct: 26 LDEIAFQMGLAFNKSQFQSVYAEGRMGSEKVFLIKPQTFMNLSGQSVRPWLDYYDLDEGS 85
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V HDD+ L G +RLR GGHGGHNGL+S++ G+++F R++IGIGRP G+M
Sbjct: 86 DMVVVHDDLDLAVGRVRLRDQGGHGGHNGLRSIIKE-TGSKKFNRIKIGIGRPKGKMSVV 144
Query: 121 AFLLQKF 127
+ +L KF
Sbjct: 145 SHVLSKF 151
>gi|296131719|ref|YP_003638966.1| peptidyl-tRNA hydrolase [Thermincola potens JR]
gi|296030297|gb|ADG81065.1| peptidyl-tRNA hydrolase [Thermincola potens JR]
Length = 187
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 96/162 (59%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+++ AE GI++N K+ FG+G + ++L KPQT+MNLSG++ +YKL
Sbjct: 25 VLEQLAEKWGIAVNKNRFKSLFGEGIFQEDKIVLLKPQTFMNLSGQAVLDAVRFYKLEST 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV +DDM LP G LRLR +GG GGH G++S++ F RLRIGIG+P D
Sbjct: 85 DILVIYDDMDLPTGRLRLRKSGGAGGHRGMESII-YLLNTENFPRLRIGIGKPGPDKDAV 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+L +F RER+ A+ + V ++L+L +G+ ++ N
Sbjct: 144 QHVLGRFGEEERERVVAAVSKAVAAVELVLKEGVEKAMNTVN 185
>gi|172040258|ref|YP_001799972.1| hypothetical protein cur_0578 [Corynebacterium urealyticum DSM
7109]
gi|448823229|ref|YP_007416394.1| peptidyl-tRNA hydrolase [Corynebacterium urealyticum DSM 7111]
gi|171851562|emb|CAQ04538.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
gi|448276726|gb|AGE36150.1| peptidyl-tRNA hydrolase [Corynebacterium urealyticum DSM 7111]
Length = 215
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 83/123 (67%), Gaps = 1/123 (0%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V++A+ ++YMNLSG + G LA ++K+P V+V HD++ L +R++ GG GHNGLK
Sbjct: 82 VIIARARSYMNLSGGAIGALAKFFKIPAEHVIVIHDELDLDPAAVRIKVGGGENGHNGLK 141
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S G R++ R+R+GIGRPPG+MDP +F+L+ F+ E + +L + + ++L +S
Sbjct: 142 STTQAL-GTRDYVRIRMGIGRPPGRMDPASFVLKPFSKQELEWLPLSLGDAADAVRLTVS 200
Query: 152 KGL 154
+G+
Sbjct: 201 RGV 203
>gi|291550021|emb|CBL26283.1| peptidyl-tRNA hydrolase [Ruminococcus torques L2-14]
Length = 192
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 96/167 (57%), Gaps = 2/167 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PL 59
+ID +E I + +A G+G + V+L KPQTYMNLSGES + YYK+ P
Sbjct: 25 VIDRLSERYNIDVTMEKHRALIGKGMIAGQKVILVKPQTYMNLSGESIRSVIDYYKVDPE 84
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
++V +DD+ L G LR+R G GGHNG+K+++ + G + F R+++G+G P + D
Sbjct: 85 KELIVIYDDISLGVGQLRIRAKGSAGGHNGIKNIIAHL-GGQVFPRIKVGVGEKPPKYDL 143
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 166
++L F+ +E + V+ ++L++S ++E+ +N +K
Sbjct: 144 ADYVLGHFSKAEQELMSEGYDNAVKAVELIVSDQISEAMNEYNRKKK 190
>gi|337751798|ref|YP_004645960.1| protein Pth [Paenibacillus mucilaginosus KNP414]
gi|336302987|gb|AEI46090.1| Pth [Paenibacillus mucilaginosus KNP414]
Length = 186
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 87/162 (53%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D FA+ GI ++ CK G+G V V L KPQT+MNLSGES +YK L
Sbjct: 26 LDRFADKHGIQISQNKCKGLLGEGHVAGQKVYLLKPQTFMNLSGESIRAFMDFYKASLED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DDM P G +RLR+ G GGHNG+KS + + G + F R+R+GI RP +
Sbjct: 86 LVVIYDDMDTPFGSIRLRYQGSAGGHNGIKSTIQHL-GTQSFQRIRMGISRPLPGRNIAD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L F+ + I L E ++ LL ++ FN
Sbjct: 145 YVLSTFSKEEVQGIPPVLDRTCEAMEHLLQHPFEKTMAVFNV 186
>gi|357399722|ref|YP_004911647.1| Peptidyl-tRNA hydrolase [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|337766131|emb|CCB74842.1| Peptidyl-tRNA hydrolase [Streptomyces cattleya NRRL 8057 = DSM
46488]
Length = 195
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 93/163 (57%), Gaps = 2/163 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D AE G + +A +G + V+LAKP TYMN SG L +YK+P+
Sbjct: 35 VVDLLAERIGGRFKSHRSRAQVVEGRIAGQRVVLAKPMTYMNTSGGPVTALRDFYKVPVA 94
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++ HD++ + LRL+ GG GHNGLKS+ E+ R+R GIGRPPG+M+
Sbjct: 95 NLVAVHDELDIGYATLRLKRGGGDNGHNGLKSITKAL--GPEYLRVRCGIGRPPGRMEVA 152
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
+F+L+ F++ R+ +D + + ++ L+++GL + +N+
Sbjct: 153 SFVLKDFSSAERKELDWFVDRAADAVEALIAEGLERAQSTYNS 195
>gi|256389403|ref|YP_003110967.1| peptidyl-tRNA hydrolase [Catenulispora acidiphila DSM 44928]
gi|256355629|gb|ACU69126.1| peptidyl-tRNA hydrolase [Catenulispora acidiphila DSM 44928]
Length = 198
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 96/159 (60%), Gaps = 3/159 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGF--VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLP 58
++D A G + +A +G VG V+LAKP+T+MNLSG L +YK+
Sbjct: 34 VVDLLAARVGGKFKSHKARADVVEGRLGVGGPRVVLAKPKTFMNLSGGPVKALRDFYKIE 93
Query: 59 LNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMD 118
+++ HD++ + GVLRL+ GG GHNGL+S+ ++ G +E+ R+R G+GRPPG+ D
Sbjct: 94 PAQIIAVHDELDVDYGVLRLKLGGGDNGHNGLRSITSSL-GTKEYHRVRFGVGRPPGRQD 152
Query: 119 PKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 157
P F+L+ F++ ++ +D + + ++ L+ +GL E+
Sbjct: 153 PADFVLKDFSSTEKKDLDYNVDRAADAVEDLIRRGLVEA 191
>gi|223974357|gb|ACN31366.1| unknown [Zea mays]
Length = 166
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 69/89 (77%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
MID AE++GIS++++ KA G+G +GDA ++LAKPQT+MN SGES G L +Y+K+PL+
Sbjct: 76 MIDVIAEAEGISLSSMQFKAMVGKGRIGDASIMLAKPQTFMNASGESVGQLVSYFKIPLS 135
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNG 89
+V+V +DD+ LP LRL GGHGGHNG
Sbjct: 136 QVVVMYDDLDLPFAKLRLLPKGGHGGHNG 164
>gi|404330858|ref|ZP_10971306.1| peptidyl-tRNA hydrolase [Sporolactobacillus vineae DSM 21990 =
SL153]
Length = 192
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 92/165 (55%), Gaps = 3/165 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PL 59
++D AE I ++ KA FG+G + V+L KP TYMN SGE+ GPL ++KL P
Sbjct: 27 VVDRLAEKYQIRLDHSKFKALFGKGTIDGNAVILVKPLTYMNASGEAVGPLLHFFKLVPD 86
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPP-GQMD 118
+ +LV HDDM L G LRLRH G GGHNG+KS++ + G FAR+++G+G P Q
Sbjct: 87 DDLLVIHDDMDLNMGRLRLRHKGSSGGHNGIKSLILHL-GTENFARIKVGVGHPERTQQA 145
Query: 119 PKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +FN + ++ + + LS +E FN
Sbjct: 146 VVNYVLSRFNREEQAIMEDTFERASDAAAAWLSLPFSELMNRFNA 190
>gi|386355761|ref|YP_006054007.1| peptidyl-tRNA hydrolase [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|365806269|gb|AEW94485.1| peptidyl-tRNA hydrolase [Streptomyces cattleya NRRL 8057 = DSM
46488]
Length = 200
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 93/163 (57%), Gaps = 2/163 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D AE G + +A +G + V+LAKP TYMN SG L +YK+P+
Sbjct: 40 VVDLLAERIGGRFKSHRSRAQVVEGRIAGQRVVLAKPMTYMNTSGGPVTALRDFYKVPVA 99
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++ HD++ + LRL+ GG GHNGLKS+ E+ R+R GIGRPPG+M+
Sbjct: 100 NLVAVHDELDIGYATLRLKRGGGDNGHNGLKSITKAL--GPEYLRVRCGIGRPPGRMEVA 157
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
+F+L+ F++ R+ +D + + ++ L+++GL + +N+
Sbjct: 158 SFVLKDFSSAERKELDWFVDRAADAVEALIAEGLERAQSTYNS 200
>gi|379724736|ref|YP_005316867.1| protein Pth [Paenibacillus mucilaginosus 3016]
gi|386727490|ref|YP_006193816.1| protein Pth [Paenibacillus mucilaginosus K02]
gi|378573408|gb|AFC33718.1| Pth [Paenibacillus mucilaginosus 3016]
gi|384094615|gb|AFH66051.1| protein Pth [Paenibacillus mucilaginosus K02]
Length = 186
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 87/162 (53%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D FA+ GI ++ CK G+G V V L KPQT+MNLSGES +YK L
Sbjct: 26 LDRFADKHGIQISQNKCKGLLGEGHVAGQKVYLLKPQTFMNLSGESIRAFMDFYKASLED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DDM P G +RLR+ G GGHNG+KS + + G + F R+R+GI RP +
Sbjct: 86 LVVIYDDMDTPFGSIRLRYQGSAGGHNGIKSTIQHL-GTQSFQRIRMGISRPLPGRNIAD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L F+ + I L E ++ LL ++ FN
Sbjct: 145 YVLSTFSKEEVQGIPPVLDRTCEAMEHLLQHPFEKTMAVFNA 186
>gi|153814528|ref|ZP_01967196.1| hypothetical protein RUMTOR_00742 [Ruminococcus torques ATCC 27756]
gi|317500571|ref|ZP_07958792.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 8_1_57FAA]
gi|331089328|ref|ZP_08338229.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 3_1_46FAA]
gi|336438725|ref|ZP_08618350.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 1_1_57FAA]
gi|145848022|gb|EDK24940.1| aminoacyl-tRNA hydrolase [Ruminococcus torques ATCC 27756]
gi|316898004|gb|EFV20054.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 8_1_57FAA]
gi|330405509|gb|EGG85041.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 3_1_46FAA]
gi|336018318|gb|EGN48069.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 1_1_57FAA]
Length = 193
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 97/167 (58%), Gaps = 2/167 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PL 59
+ID +E I ++ +A G+G + V+LAKPQTYMNLSGES L YYK+
Sbjct: 25 VIDRISEKYNIDVDAKKHRALIGKGIIQGQKVILAKPQTYMNLSGESVRSLLDYYKVDEE 84
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
+ ++V +DD+ L G LR+R G GGHNG+K+++ + G++ F R+++G+G P + D
Sbjct: 85 HELIVIYDDISLDVGQLRIRAKGSAGGHNGMKNIIAHL-GSQVFPRIKVGVGEKPAKYDL 143
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 166
++L F+ + +D V ++L++S + E+ +N +K
Sbjct: 144 ADYVLGHFSKGEAKLMDEGYDHAVHAVELIVSGQINEAMNEYNRKKK 190
>gi|260887179|ref|ZP_05898442.1| aminoacyl-tRNA hydrolase [Selenomonas sputigena ATCC 35185]
gi|330839054|ref|YP_004413634.1| peptidyl-tRNA hydrolase [Selenomonas sputigena ATCC 35185]
gi|260863241|gb|EEX77741.1| aminoacyl-tRNA hydrolase [Selenomonas sputigena ATCC 35185]
gi|329746818|gb|AEC00175.1| peptidyl-tRNA hydrolase [Selenomonas sputigena ATCC 35185]
Length = 218
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 95/167 (56%), Gaps = 3/167 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++DA AE G+ A +G +G VLL KP TYMN SG + GPL +YKL
Sbjct: 25 LVDALAERLGVDAWREKFNALTAEGRIGAQKVLLVKPLTYMNESGRAVGPLLDWYKLAPE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRP-PGQMDP 119
++V HDDM + G +RLR G GGHNG+KS++ + G+ +F+R+RIGIGRP PG
Sbjct: 85 DLIVAHDDMDIAAGTIRLRRKGSAGGHNGIKSLLAHI-GSEDFSRVRIGIGRPLPGWTVV 143
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 166
K +L F A +I A+ + ++ +++ G+ + +N +K
Sbjct: 144 K-HVLAPFPADDAPKIQEAISYLLPAVECIVTDGIDMAMNRYNPRRK 189
>gi|164688874|ref|ZP_02212902.1| hypothetical protein CLOBAR_02522 [Clostridium bartlettii DSM
16795]
gi|164602078|gb|EDQ95543.1| aminoacyl-tRNA hydrolase [Clostridium bartlettii DSM 16795]
Length = 183
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 88/162 (54%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ I ++ + KA G+G VG V+L KP TYMNLSGES + YY + L
Sbjct: 21 VIDLLAKEYSIDVSKIKHKALIGEGRVGTEKVILVKPMTYMNLSGESVADICNYYNIDLE 80
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ L G +R+R G G HNG++S++ G+ EF R+R+GI +P D
Sbjct: 81 NLIVIYDDIDLDVGKIRIRKKGSGGTHNGMRSIIKCL-GSNEFPRVRVGISKPKNGQDLA 139
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
F+L +F+ + + + + V + + L + +N
Sbjct: 140 DFVLSRFSKEDEKSLQESFENSVAAVDCAIRNDLDLAMNRYN 181
>gi|374987105|ref|YP_004962600.1| peptidyl-tRNA hydrolase [Streptomyces bingchenggensis BCW-1]
gi|297157757|gb|ADI07469.1| peptidyl-tRNA hydrolase [Streptomyces bingchenggensis BCW-1]
Length = 196
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 84/132 (63%), Gaps = 2/132 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V++AKP ++MNLSG T L +YK+P+ V+ HD++ + G LRL+ GG GHNGLK
Sbjct: 67 VIVAKPMSFMNLSGGPTTALRDFYKVPVGHVIAVHDELDIDYGALRLKLGGGDNGHNGLK 126
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ + + ++ R+R GIGRPPG+MD AF+L+ F+A R+ +D + + ++ L+
Sbjct: 127 SITKSL--SPDYFRVRFGIGRPPGRMDVAAFVLKDFSAAERKELDYFVDRAADAVETLIV 184
Query: 152 KGLTESARHFNT 163
GL + +N+
Sbjct: 185 DGLERAQSTYNS 196
>gi|302542982|ref|ZP_07295324.1| aminoacyl-tRNA hydrolase [Streptomyces hygroscopicus ATCC 53653]
gi|302460600|gb|EFL23693.1| aminoacyl-tRNA hydrolase [Streptomyces himastatinicus ATCC 53653]
Length = 198
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 83/132 (62%), Gaps = 2/132 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V++AKP ++MNLSG T L +YK+P + V+ HD++ + G LRL+ GG GHNGLK
Sbjct: 69 VIVAKPMSFMNLSGGPTTALRDFYKVPTSHVIAIHDELDIDYGALRLKLGGGDNGHNGLK 128
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ + G ++ R+R GIGRPPG+MD AF+L+ F+A R +D + + ++ L+
Sbjct: 129 SITKS--GGPDYFRIRFGIGRPPGRMDVAAFVLKDFSAAERRELDYFVDRAADAVETLIV 186
Query: 152 KGLTESARHFNT 163
GL + +N+
Sbjct: 187 DGLERAQGTYNS 198
>gi|374605014|ref|ZP_09677959.1| peptidyl-tRNA hydrolase [Paenibacillus dendritiformis C454]
gi|374389399|gb|EHQ60776.1| peptidyl-tRNA hydrolase [Paenibacillus dendritiformis C454]
Length = 186
Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 89/161 (55%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D AE I + CKA G+G VG ++L KP TYMNLSGE+ YYK
Sbjct: 26 VDRLAERHQIQVRDSKCKALVGEGRVGTEKIVLIKPMTYMNLSGEAVRAYMDYYKADPAD 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DDM G +RLR+ G GGHNG+KS++ + G + F R+R+GI RP +
Sbjct: 86 LIVLYDDMDTELGKVRLRYQGSSGGHNGIKSLIQHL-GTQTFNRVRMGISRPQPGREIVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F R++++ A+ + + ++ L+ ++ FN
Sbjct: 145 YVLSPFAKAERDKLEEAIDKTCDAVEFALTHPFDQTMAKFN 185
>gi|417002113|ref|ZP_11941502.1| aminoacyl-tRNA hydrolase [Anaerococcus prevotii ACS-065-V-Col13]
gi|325479254|gb|EGC82350.1| aminoacyl-tRNA hydrolase [Anaerococcus prevotii ACS-065-V-Col13]
Length = 193
Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 91/164 (55%), Gaps = 1/164 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A GI + K+ +GQG + V+L KPQTYMN SGE+ + +YK +++
Sbjct: 26 IDYLANKFGIDVKKSKFKSLYGQGVISGQKVMLVKPQTYMNNSGEAVREIINFYKFDIDK 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DD+ + G +R+R G G HNG+KS++ + ++ F R++I +G+ P MD
Sbjct: 86 LIVIYDDIDIEFGTIRIRKKGSAGTHNGMKSIIYQIQDDK-FPRIKIAVGKKPEYMDLAN 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQ 165
F+L F E I ++ + ++ ++ + S FN+++
Sbjct: 145 FVLSGFTEKEAEVIREEIKLASDSIETMIESSIDMSMNKFNSVK 188
>gi|354559302|ref|ZP_08978552.1| Peptidyl-tRNA hydrolase [Desulfitobacterium metallireducens DSM
15288]
gi|353542891|gb|EHC12351.1| Peptidyl-tRNA hydrolase [Desulfitobacterium metallireducens DSM
15288]
Length = 185
Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 79/138 (57%), Gaps = 7/138 (5%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V KP T+MNLSG S +A +YK+ +LV HDDM LP G +RLR +G GGHNG+K
Sbjct: 55 VFFLKPLTFMNLSGRSIREIAQFYKIASKDILVAHDDMDLPLGRIRLRQSGSAGGHNGIK 114
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S + G EF RL+IG+GRPP DP ++L F ++ L+ G EVL+L +
Sbjct: 115 STIAEV-GTEEFWRLKIGVGRPPAGWDPANYVLGSFGKEELSSLEDVLERGQEVLRLWIQ 173
Query: 152 KGLTESARHFNTIQKYKH 169
ES + N KY H
Sbjct: 174 ---GESNKAMN---KYNH 185
>gi|154503861|ref|ZP_02040921.1| hypothetical protein RUMGNA_01687 [Ruminococcus gnavus ATCC 29149]
gi|336432001|ref|ZP_08611841.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 2_1_58FAA]
gi|153795460|gb|EDN77880.1| putative aminoacyl-tRNA hydrolase [Ruminococcus gnavus ATCC 29149]
gi|336019445|gb|EGN49169.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 2_1_58FAA]
Length = 192
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 99/169 (58%), Gaps = 2/169 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+IDA A I ++T +A G+G + V+LAKPQTYMNLSGES L YYK+
Sbjct: 25 VIDALARKYNIDVDTKKHRAYIGKGMIEGQKVILAKPQTYMNLSGESVRSLLDYYKVDEE 84
Query: 61 R-VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
+ +LV +DD+ L G +R+R G GGHNG+K+++ + G + F R+++G+G P + D
Sbjct: 85 QELLVIYDDISLGVGQIRIRAKGSAGGHNGIKNIIAHL-GGQVFPRIKVGVGEKPPKWDL 143
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYK 168
++L F+ +E+++ + V +K +++ + + +N +K K
Sbjct: 144 ADYVLGHFSKEEQEQMEEGYEHAVCAVKEIVTGNIEAAMNEYNRKKKEK 192
>gi|359410005|ref|ZP_09202470.1| Peptidyl-tRNA hydrolase [Clostridium sp. DL-VIII]
gi|357168889|gb|EHI97063.1| Peptidyl-tRNA hydrolase [Clostridium sp. DL-VIII]
Length = 191
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 90/151 (59%), Gaps = 7/151 (4%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ I +N K +G+GF+ + V+L KP TYMNLSGES + +Y L +
Sbjct: 25 VIDNIAKEYNIEINRQKFKGVYGEGFINNNKVMLLKPTTYMNLSGESVREVVDFYNLENS 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
VLV +DD+ L G LR+R G GGHNG+KS++ + G+ F+R+++GIG+P +D
Sbjct: 85 EVLVIYDDISLEIGKLRIRDKGSAGGHNGIKSIIAHL-GSDIFSRIKVGIGQP--NVDLV 141
Query: 121 AFLLQKFN----AIARERIDTALQEGVEVLK 147
++L +F I E ID + + E+++
Sbjct: 142 KYVLGRFTKEEMTILSESIDASTKAAEEIIR 172
>gi|336066935|ref|YP_004561793.1| aminoacyl-tRNA hydrolase [Erysipelothrix rhusiopathiae str.
Fujisawa]
gi|334296881|dbj|BAK32752.1| aminoacyl-tRNA hydrolase [Erysipelothrix rhusiopathiae str.
Fujisawa]
Length = 182
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 88/151 (58%), Gaps = 8/151 (5%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A G+S++T KA + FVG V+L KPQT+MNLSGES G + YY + L
Sbjct: 25 VIDEVASKLGVSISTNKFKALIAETFVGTEKVVLVKPQTFMNLSGESVGEVMRYYDVDLE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV DDM + G LRLR G GG G+KS++++ G+ EF RL++GIG+ Q+
Sbjct: 85 DLLVISDDMDITVGSLRLREKGSSGGQKGVKSIIDHL-GSNEFLRLKVGIGKST-QIKTV 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
++L K + +TA+ G + + +S
Sbjct: 143 DWVLGKIDE------ETAISLGAQCVSDFIS 167
>gi|271969794|ref|YP_003343990.1| aminoacyl-tRNA hydrolase [Streptosporangium roseum DSM 43021]
gi|270512969|gb|ACZ91247.1| Aminoacyl-tRNA hydrolase [Streptosporangium roseum DSM 43021]
Length = 201
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 92/163 (56%), Gaps = 1/163 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A G +A +G + AP +LAKP ++MNLSG LA +YK+
Sbjct: 30 VLDELAARAGGRFKVHRSRAEVLEGRLAGAPAVLAKPLSFMNLSGGPVKALADFYKVDPA 89
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
RV+ HD++ +P G LR + GG GHNGLKS+ + +++ R+R GIGRPPG+MD
Sbjct: 90 RVIAVHDELDIPYGALRAKLGGGDNGHNGLKSITKSL-ATKDYLRVRFGIGRPPGRMDAA 148
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
A++L+ F R+ + + ++++ L++ GL + F+
Sbjct: 149 AYVLRDFATAERKDLPFLVDRAADMVESLITSGLEPTQNTFHA 191
>gi|187935710|ref|YP_001884405.1| peptidyl-tRNA hydrolase [Clostridium botulinum B str. Eklund 17B]
gi|238691600|sp|B2TI10.1|PTH_CLOBB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|187723863|gb|ACD25084.1| aminoacyl-tRNA hydrolase [Clostridium botulinum B str. Eklund 17B]
Length = 191
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 97/170 (57%), Gaps = 3/170 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID + I +N + +G+GF+ + V+L KP TYMNLSG+S +A +YK+
Sbjct: 25 VIDNISNEYNIDINRQKFRGVYGEGFIANNKVILLKPTTYMNLSGDSVREVANFYKISNE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ L G LR+R G GGHNG+KS++ N + F R+++G+G+P +D
Sbjct: 85 NIIVIYDDISLDIGRLRIREKGSAGGHNGIKSIIANLSTDV-FPRIKVGVGQP--NIDLV 141
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHI 170
++L KF+ +E + +++ ++ ++ + + + FN + K I
Sbjct: 142 NYVLGKFSKEEKEVLKESIEVATNSVEEIIKQDVNSAMNKFNGFKANKSI 191
>gi|188588535|ref|YP_001919597.1| peptidyl-tRNA hydrolase [Clostridium botulinum E3 str. Alaska E43]
gi|238689626|sp|B2UXS9.1|PTH_CLOBA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|188498816|gb|ACD51952.1| peptidyl-tRNA hydrolase [Clostridium botulinum E3 str. Alaska E43]
Length = 191
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 96/170 (56%), Gaps = 3/170 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID + I +N K +G+GF+ + V+L KP TYMNLSG+S +A +YK+
Sbjct: 25 VIDNISNEYNIDINRQKFKGVYGEGFIANNKVILLKPTTYMNLSGDSVREVANFYKISNE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ L G LR+R G GGHNG+KS++ N + F R+++G+G+P +
Sbjct: 85 NIIVIYDDISLDIGRLRIREKGSAGGHNGIKSIIANLSTDV-FPRIKVGVGQPNDNL--V 141
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHI 170
++L KF+ +E + +++ ++ ++ + + + FN + K I
Sbjct: 142 DYVLGKFSKEEKEVLKESIEAATNSVEEIIKQDINSAMNKFNGFKANKSI 191
>gi|402833543|ref|ZP_10882156.1| aminoacyl-tRNA hydrolase [Selenomonas sp. CM52]
gi|402280036|gb|EJU28806.1| aminoacyl-tRNA hydrolase [Selenomonas sp. CM52]
Length = 218
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 95/167 (56%), Gaps = 3/167 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++DA AE G+ A +G +G VLL KP TYMN SG + GPL +YKL
Sbjct: 25 LVDALAERLGVDAWREKFNALVAEGRIGAQKVLLVKPLTYMNESGRAVGPLLDWYKLAPE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRP-PGQMDP 119
++V HDDM + G +RLR G GGHNG+KS++ + G+ +F+R+RIGIGRP PG
Sbjct: 85 DLIVAHDDMDIAAGTIRLRRKGSAGGHNGIKSLLAHI-GSEDFSRVRIGIGRPLPGWTVV 143
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 166
K +L F A +I A+ + ++ +++ G+ + +N +K
Sbjct: 144 K-HVLAPFPAEDVLKIQEAISYLLPAVECIVTDGIDMAMNRYNPRRK 189
>gi|255659622|ref|ZP_05405031.1| aminoacyl-tRNA hydrolase [Mitsuokella multacida DSM 20544]
gi|260848183|gb|EEX68190.1| aminoacyl-tRNA hydrolase [Mitsuokella multacida DSM 20544]
Length = 216
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 91/163 (55%), Gaps = 3/163 (1%)
Query: 2 IDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPL 59
IDA A++ G+S + K A +G V+L KPQTYMN SG + GPL +YKL
Sbjct: 26 IDALADALGLSASDWKDKFEAKVADARIGTEKVVLVKPQTYMNESGRAVGPLMNWYKLAP 85
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
++V HDDM +P G +R+R G GGHNG+KS++ + G+ FAR+RIGIGRP
Sbjct: 86 EDLIVVHDDMDIPAGTIRIRKKGSAGGHNGIKSILAHV-GDEHFARVRIGIGRPLPGWTV 144
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+L F + +I A+ + ++ +++ + + FN
Sbjct: 145 VNHVLAGFPEEEQPKIREAIDYLIPAVECIVTHDVDMAMNQFN 187
>gi|452990576|emb|CCQ98195.1| peptidyl-tRNA hydrolase [Clostridium ultunense Esp]
Length = 189
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 84/162 (51%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A+ I M +A G+ +LL KP TYMN SG++ + +YKL +
Sbjct: 25 VVDLLAKEWSIPMRASKWQALIGEAKKEGERILLTKPLTYMNRSGDAVRKIMDWYKLSCD 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV +DD+ LP G LRLR G GGHNG+KS++ G +F R+R+GIG PP
Sbjct: 85 DLLVIYDDLDLPVGNLRLREKGSAGGHNGMKSIIQQL-GTEQFKRIRVGIGHPPAGASVP 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F +E++D ++ + LS + FN
Sbjct: 144 EYVLSPFEKEEKEKVDAGIKLAAQAANAWLSLPFPQVMNRFN 185
>gi|323342262|ref|ZP_08082494.1| aminoacyl-tRNA hydrolase [Erysipelothrix rhusiopathiae ATCC 19414]
gi|322463374|gb|EFY08568.1| aminoacyl-tRNA hydrolase [Erysipelothrix rhusiopathiae ATCC 19414]
Length = 186
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 88/151 (58%), Gaps = 8/151 (5%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A G+S++T KA + FVG V+L KPQT+MNLSGES G + YY + L
Sbjct: 29 VIDEVASKLGVSISTNKFKALIAETFVGTEKVVLVKPQTFMNLSGESVGEVMRYYDVDLE 88
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV DDM + G LRLR G GG G+KS++++ G+ EF RL++GIG+ Q+
Sbjct: 89 DLLVISDDMDITVGSLRLREKGSSGGQKGVKSIIDHL-GSNEFLRLKVGIGKST-QIKTV 146
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
++L K + +TA+ G + + +S
Sbjct: 147 DWVLGKIDE------ETAISLGAQCVSDFIS 171
>gi|365840561|ref|ZP_09381746.1| aminoacyl-tRNA hydrolase [Anaeroglobus geminatus F0357]
gi|364561178|gb|EHM39091.1| aminoacyl-tRNA hydrolase [Anaeroglobus geminatus F0357]
Length = 188
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 88/168 (52%), Gaps = 2/168 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A +S+ +A V LL KPQTYMN SG + GPL +YK+
Sbjct: 23 VVDELARKWDVSLWKSQMEALVASVAVDGETALLVKPQTYMNDSGRAVGPLMRWYKIAEE 82
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V V +DDM LP G LR+R NG GGHNG++S+ N G R F R R+GIGRP G+ D
Sbjct: 83 DVYVIYDDMDLPVGKLRIRENGSDGGHNGIRSLFAN--GCRNFVRFRLGIGRPLGRQDVI 140
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYK 168
+L F+ + + E ++ ++ G+++ +N +K K
Sbjct: 141 NHVLTPFSEAYCAQFADGVAYAAEAVEGVMKLGVSKGMNRYNPKRKSK 188
>gi|251779900|ref|ZP_04822820.1| aminoacyl-tRNA hydrolase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243084215|gb|EES50105.1| aminoacyl-tRNA hydrolase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 191
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 96/170 (56%), Gaps = 3/170 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID + I +N K +G+GF+ + V+L KP TYMNLSG+S +A +YK+
Sbjct: 25 VIDNISNEYNIDINRQKFKGVYGEGFIANNKVILLKPTTYMNLSGDSVREVANFYKISNE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ L G LR+R G GGHNG+KS++ N + F R+++G+G+P +
Sbjct: 85 NIIVIYDDISLDIGRLRIREKGSAGGHNGIKSIIANLSTDV-FPRIKVGVGQPNDNL--V 141
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHI 170
++L KF+ +E + +++ ++ ++ + + + FN + K I
Sbjct: 142 DYVLGKFSKEEKEVLKESIEAATNSVEEIIKQDVNSAMNKFNGFKANKSI 191
>gi|403670114|ref|ZP_10935280.1| peptidyl-tRNA hydrolase [Kurthia sp. JC8E]
Length = 187
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 85/161 (52%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
IDA A+ G+++N A + + V+L KP TYMN+SGE+ P+ Y+ + +
Sbjct: 26 IDALADKWGMTLNQEKFNAAYATAHRPEGKVMLMKPLTYMNISGEAVRPMMDYFDIDVED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DDM L G LRLR G GGHNG+KS++ + G + F R+R+GI RPP M
Sbjct: 86 IVVIYDDMDLDKGKLRLRQKGSAGGHNGIKSLIQHL-GTQNFNRVRVGISRPPQGMKVPD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F+ + A + L K E +N
Sbjct: 145 YVLSRFSKEEMPAMQEAFSTAADACAFFLEKPFAEVMNKYN 185
>gi|159896843|ref|YP_001543090.1| aminoacyl-tRNA hydrolase [Herpetosiphon aurantiacus DSM 785]
gi|229485507|sp|A9B7I9.1|PTH_HERA2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|159889882|gb|ABX02962.1| Aminoacyl-tRNA hydrolase [Herpetosiphon aurantiacus DSM 785]
Length = 206
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 90/162 (55%), Gaps = 2/162 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PLN 60
+ FA +S + A +G V V LA+PQT+MN SG+S L +YK+ P +
Sbjct: 26 VAEFARRHHLSFDGKRSDARIAEGLVNGQRVALARPQTFMNDSGKSVVGLVNWYKIDPAS 85
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV +DD+ LP G ++LR+ G GG G+ S++ G ++FARLR GIGRPP +
Sbjct: 86 ELLVVYDDLDLPFGTIKLRNQGSSGGQRGMNSIIQ-LLGTQKFARLRFGIGRPPEGWEVI 144
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
F+L +NA RE + VE +L LS G+T++ N
Sbjct: 145 NFVLGNWNAAERETLPKLYDRAVEACELCLSDGVTKAMNAVN 186
>gi|312109200|ref|YP_003987516.1| peptidyl-tRNA hydrolase [Geobacillus sp. Y4.1MC1]
gi|336233594|ref|YP_004586210.1| peptidyl-tRNA hydrolase [Geobacillus thermoglucosidasius C56-YS93]
gi|311214301|gb|ADP72905.1| peptidyl-tRNA hydrolase [Geobacillus sp. Y4.1MC1]
gi|335360449|gb|AEH46129.1| Peptidyl-tRNA hydrolase [Geobacillus thermoglucosidasius C56-YS93]
Length = 187
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 87/163 (53%), Gaps = 1/163 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ IS T + V+L KP TYMNLSGE PL YY++ +N
Sbjct: 26 VIDELAKRWNISFQTAKFNGMIASHIISGEKVILCKPLTYMNLSGECVRPLIDYYRIDIN 85
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V+V +DD+ LP G +RLR G GGHNG+KS++++ G +EF R+RIGIGRP
Sbjct: 86 DVVVIYDDLDLPVGKIRLRMKGSAGGHNGIKSLIHHL-GTQEFKRIRIGIGRPASGEKVI 144
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F+ I A+ + + +++ + FN
Sbjct: 145 DYVLGRFHEEESGAIMEAILRSADACEKAVTEPFLQVMNEFNV 187
>gi|73748435|ref|YP_307674.1| peptidyl-tRNA hydrolase [Dehalococcoides sp. CBDB1]
gi|289432482|ref|YP_003462355.1| peptidyl-tRNA hydrolase [Dehalococcoides sp. GT]
gi|452204875|ref|YP_007485004.1| peptidyl-tRNA hydrolase [Dehalococcoides mccartyi BTF08]
gi|119390933|sp|Q3ZX09.1|PTH_DEHSC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|73660151|emb|CAI82758.1| peptidyl-tRNA hydrolase [Dehalococcoides sp. CBDB1]
gi|288946202|gb|ADC73899.1| peptidyl-tRNA hydrolase [Dehalococcoides sp. GT]
gi|452111931|gb|AGG07662.1| peptidyl-tRNA hydrolase [Dehalococcoides mccartyi BTF08]
Length = 189
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 91/162 (56%), Gaps = 4/162 (2%)
Query: 5 FAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLV 64
FA+ IS + C + G G + D ++LAKPQTYMNLSG++ L Y L ++V
Sbjct: 29 FAKENHISFDKKCCLSRTGSGRINDEEIVLAKPQTYMNLSGKAVNQLLRRYNLKATDIIV 88
Query: 65 FHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAF-- 122
DD+ LP G LRLR G GGHNG+ S++ + G +EF RL+IGIG+P + +
Sbjct: 89 VQDDLDLPAGKLRLRLGGSAGGHNGVSSIITDI-GTKEFIRLKIGIGKPDARNNGAEVVD 147
Query: 123 -LLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
+L F RE I+TA+ E L L++ GL ++ FN
Sbjct: 148 HVLGNFGGEEREIIETAIARAAEALACLITSGLDTASNRFNC 189
>gi|256826844|ref|YP_003150803.1| peptidyl-tRNA hydrolase [Cryptobacterium curtum DSM 15641]
gi|256582987|gb|ACU94121.1| peptidyl-tRNA hydrolase [Cryptobacterium curtum DSM 15641]
Length = 185
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 87/161 (54%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ G C A +G + + V+LAKPQ+YMN SG L Y + +
Sbjct: 26 IDILADEAGARYWKNECGALSARGVLANEEVVLAKPQSYMNTSGGPVKQLCNTYGIAPDN 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V HDD+ + G +R++ GGH GHNGL+S+ + G R++ R+R GIGRPPG+M
Sbjct: 86 LIVIHDDLDIAPGRIRVKFGGGHAGHNGLRSICDKL-GTRDWFRVRCGIGRPPGRMSVSD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L + A++ E + L+ GL ++ + FN
Sbjct: 145 YVLSRPRHEAQDDFQVGCATAAEAVSFLIRNGLEKTQQEFN 185
>gi|423718317|ref|ZP_17692499.1| peptidyl-tRNA hydrolase [Geobacillus thermoglucosidans TNO-09.020]
gi|383365253|gb|EID42552.1| peptidyl-tRNA hydrolase [Geobacillus thermoglucosidans TNO-09.020]
Length = 186
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 87/163 (53%), Gaps = 1/163 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ IS T + V+L KP TYMNLSGE PL YY++ +N
Sbjct: 25 VIDELAKRWNISFQTAKFNGMIASHIISGEKVILCKPLTYMNLSGECVRPLIDYYRIDIN 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V+V +DD+ LP G +RLR G GGHNG+KS++++ G +EF R+RIGIGRP
Sbjct: 85 DVVVIYDDLDLPVGKIRLRMKGSAGGHNGIKSLIHHL-GTQEFKRIRIGIGRPASGEKVI 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F+ I A+ + + +++ + FN
Sbjct: 144 DYVLGRFHEEESGAIMEAILRSADACEKAVTEPFLQVMNEFNV 186
>gi|138893725|ref|YP_001124178.1| peptidyl-tRNA hydrolase [Geobacillus thermodenitrificans NG80-2]
gi|166199333|sp|A4IJC9.1|PTH_GEOTN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|134265238|gb|ABO65433.1| Peptidyl-tRNA hydrolase [Geobacillus thermodenitrificans NG80-2]
Length = 186
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 88/162 (54%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ +S+ T + FG V V L KP TYMNLSGE PL +Y + ++
Sbjct: 25 VIDELAKRWNVSLKTAKFRGLFGTASVFGEKVALCKPLTYMNLSGECVCPLIDFYDIAVD 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V++ +DD+ LP G +RLR GG GGHNG+KS++++ G +F R+RIGIGRP
Sbjct: 85 DVIIIYDDLDLPPGKIRLRLKGGSGGHNGVKSIIHHL-GTEQFKRIRIGIGRPTNGQPVA 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F + + A+ + + ++ + FN
Sbjct: 144 DYVLSRFTEEEKPAVMEAVLRAADACEQAVTTPFIQVMNDFN 185
>gi|196250766|ref|ZP_03149453.1| Aminoacyl-tRNA hydrolase [Geobacillus sp. G11MC16]
gi|196209716|gb|EDY04488.1| Aminoacyl-tRNA hydrolase [Geobacillus sp. G11MC16]
Length = 186
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 88/162 (54%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ +S+ T + FG V V L KP TYMNLSGE PL +Y + ++
Sbjct: 25 VIDELAKRWNVSLKTAKFRGLFGTASVFGEKVALCKPLTYMNLSGECVCPLIDFYDIAVD 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V++ +DD+ LP G +RLR GG GGHNG+KS++++ G +F R+RIGIGRP
Sbjct: 85 DVIIIYDDLDLPPGKIRLRLKGGSGGHNGVKSIIHHL-GTEQFKRIRIGIGRPTNGQPVA 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F + + A+ + + ++ + FN
Sbjct: 144 DYVLSRFTEEEKPVVMEAVLRAADACEQAVTTPFIQVMNDFN 185
>gi|403069020|ref|ZP_10910352.1| peptidyl-tRNA hydrolase [Oceanobacillus sp. Ndiop]
Length = 187
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 78/120 (65%), Gaps = 1/120 (0%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+L +PQTYMNLSGES PL YY L L+ VLV +DD+ LP G +RLR GGHGGHNG++
Sbjct: 56 VILLQPQTYMNLSGESIRPLMDYYNLDLDDVLVIYDDLDLPTGKIRLRQKGGHGGHNGVR 115
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S +++ G +EF R+R+G+GRP G + ++L F +E + +++ + + L
Sbjct: 116 STIDHL-GTKEFKRIRLGVGRPVGPIPVVDYVLGAFPKEEQEDVIISIKNAADACESWLK 174
>gi|294629796|ref|ZP_06708356.1| peptidyl-tRNA hydrolase [Streptomyces sp. e14]
gi|292833129|gb|EFF91478.1| peptidyl-tRNA hydrolase [Streptomyces sp. e14]
Length = 203
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 83/132 (62%), Gaps = 2/132 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+LAKP +YMNLSG L +YK+PL+ V+ HD++ + GVLRL+ GG GHNGLK
Sbjct: 74 VVLAKPMSYMNLSGGPVNALRDFYKVPLDHVVAVHDELDIDYGVLRLKRGGGDNGHNGLK 133
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ ++ R+R GIGRPPG+M F+L+ F++ R+ +D + + ++ LL+
Sbjct: 134 SMTKAM--GPDYHRVRFGIGRPPGRMQVADFVLKDFSSAERKELDYFVDRAADAVECLLA 191
Query: 152 KGLTESARHFNT 163
+GL + +N+
Sbjct: 192 EGLERAQSAYNS 203
>gi|455645250|gb|EMF24311.1| peptidyl-tRNA hydrolase [Streptomyces gancidicus BKS 13-15]
Length = 198
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 82/132 (62%), Gaps = 2/132 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+L KP +YMNLSG L +YK+P RV+ HD++ + G LRL+ GG GHNGLK
Sbjct: 69 VVLVKPMSYMNLSGGPVNALREFYKVPAQRVVAVHDELDIDYGTLRLKLGGGDNGHNGLK 128
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ F RE+ R+R GIGRPPG+M F+L+ F++ R+ +D + + ++ L++
Sbjct: 129 SLTGAF--GREYHRVRFGIGRPPGRMPVADFVLKDFSSAERKELDYFVDRTADAVECLVT 186
Query: 152 KGLTESARHFNT 163
+GL + +N+
Sbjct: 187 EGLERAQSAYNS 198
>gi|375087432|ref|ZP_09733804.1| peptidyl-tRNA hydrolase [Megamonas funiformis YIT 11815]
gi|374560760|gb|EHR32116.1| peptidyl-tRNA hydrolase [Megamonas funiformis YIT 11815]
Length = 202
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 89/154 (57%), Gaps = 1/154 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++DA AE I++ A +G +G +LL KPQTYMN SGE+ GPL +YK+
Sbjct: 25 LVDALAEHLNINLWKDKFNAQIAEGRIGTEKILLVKPQTYMNNSGEAVGPLMRWYKVTPE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V HDDM +P G +R+R G GGHNG+KS++ + G+ F R+R+G+GRP
Sbjct: 85 DIIVAHDDMDIPAGTIRIRKKGSSGGHNGIKSLIAHL-GSENFPRVRLGVGRPLPGWSVV 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 154
+L F + +D A++ + ++ +++ +
Sbjct: 144 NHVLAPFPQEDKTAVDEAIKYLIPAVECIVNDSV 177
>gi|229917411|ref|YP_002886057.1| peptidyl-tRNA hydrolase [Exiguobacterium sp. AT1b]
gi|259535188|sp|C4KZU9.1|PTH_EXISA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|229468840|gb|ACQ70612.1| peptidyl-tRNA hydrolase [Exiguobacterium sp. AT1b]
Length = 185
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 81/142 (57%), Gaps = 1/142 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID AE GIS+N A G G + V+L KP TYMNLSGE+ P+ YYK+ ++
Sbjct: 26 IDRLAEKHGISLNEAKFNALMGTGRINGERVVLVKPLTYMNLSGEAVRPILDYYKIEIDD 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+LV +DD+ + G LR R G GGHNG+KS++ + G EF RL++GIGRPP +
Sbjct: 86 LLVIYDDLDMVPGKLRFRPKGSAGGHNGIKSLIQHL-GTAEFKRLKLGIGRPPHPIKVVD 144
Query: 122 FLLQKFNAIARERIDTALQEGV 143
++L + ++ L V
Sbjct: 145 WVLMNYRKDELPELNETLDNAV 166
>gi|110803012|ref|YP_699741.1| peptidyl-tRNA hydrolase [Clostridium perfringens SM101]
gi|119390928|sp|Q0SQ66.1|PTH_CLOPS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|110683513|gb|ABG86883.1| peptidyl-tRNA hydrolase [Clostridium perfringens SM101]
Length = 188
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 91/165 (55%), Gaps = 3/165 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A I +N K G+GF+ + V+L KP TYMNLSGES +YKL +
Sbjct: 25 VIDYMANKYNIDVNREKFKGICGEGFIENKKVILLKPLTYMNLSGESIREFVNFYKLEDD 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ L G LR+R G GGHNG+KS++ N G++ F R+++G+G+P +
Sbjct: 85 EIIVVYDDISLDIGRLRIREKGSAGGHNGIKSIIQNLGGDK-FPRVKVGVGQPKDNL--V 141
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQ 165
+L KF+ RE I+ + + + ++ ES FN +
Sbjct: 142 NHVLGKFSKEDREHIEKVIPVVSDAIVEIVKNDAKESMNKFNGVN 186
>gi|345008848|ref|YP_004811202.1| peptidyl-tRNA hydrolase [Streptomyces violaceusniger Tu 4113]
gi|344035197|gb|AEM80922.1| Peptidyl-tRNA hydrolase [Streptomyces violaceusniger Tu 4113]
Length = 196
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 83/132 (62%), Gaps = 2/132 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V++AKP ++MNLSG L +YK+P+ V+ HD++ + G LRL+ GG GHNGLK
Sbjct: 67 VVVAKPMSFMNLSGGPVTALRDFYKVPVGHVVAVHDELDIDYGALRLKVGGGDNGHNGLK 126
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ + ++ R+R GIGRPPG+MD AF+L+ F+A R+ +D + + ++ L++
Sbjct: 127 SITKSL--GADYCRVRFGIGRPPGRMDVAAFVLKDFSAAERKELDYFVDRAADAVETLIA 184
Query: 152 KGLTESARHFNT 163
GL + +N+
Sbjct: 185 DGLERAQGTYNS 196
>gi|292670806|ref|ZP_06604232.1| aminoacyl-tRNA hydrolase [Selenomonas noxia ATCC 43541]
gi|422343852|ref|ZP_16424779.1| peptidyl-tRNA hydrolase [Selenomonas noxia F0398]
gi|292647427|gb|EFF65399.1| aminoacyl-tRNA hydrolase [Selenomonas noxia ATCC 43541]
gi|355378268|gb|EHG25459.1| peptidyl-tRNA hydrolase [Selenomonas noxia F0398]
Length = 211
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 82/140 (58%), Gaps = 1/140 (0%)
Query: 27 VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGG 86
+G V L KP TYMN SGE+ GP+ +YYKL ++V HDDM +P G +R+R GG GG
Sbjct: 51 IGGEKVFLVKPLTYMNNSGEALGPMLSYYKLDTEDLVVAHDDMDIPAGTVRIRKKGGSGG 110
Query: 87 HNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 146
HNG+KS++ + G+ FAR+RIGIGRPP +L F+A RI A+ + +
Sbjct: 111 HNGIKSIIAHV-GSENFARVRIGIGRPPAGWSVINHVLAPFSAEDVPRIREAIDYLLPAM 169
Query: 147 KLLLSKGLTESARHFNTIQK 166
+ + G + +N +K
Sbjct: 170 ECIAQDGTDLAMNRYNPHKK 189
>gi|238917834|ref|YP_002931351.1| hypothetical protein EUBELI_01915 [Eubacterium eligens ATCC 27750]
gi|259535178|sp|C4Z4L5.1|PTH_EUBE2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238873194|gb|ACR72904.1| Hypothetical protein EUBELI_01915 [Eubacterium eligens ATCC 27750]
Length = 186
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 88/162 (54%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ IS++T K G+G + V+L KP TYMN SGE + YYK ++
Sbjct: 25 VIDELADKYNISVDTAKHKGLIGKGVIAGQKVILVKPMTYMNNSGECIREVMDYYKCDID 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
LV DD+ L G LRLR G GGHNG+KS++ + G+ +F R++ G+G P D
Sbjct: 85 DFLVIFDDISLDVGKLRLRAKGSAGGHNGIKSIIAHL-GSDKFKRIKFGVGDKPKNWDLA 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L KF A + A ++ E ++ +L+ G+ +N
Sbjct: 144 DWVLGKFPAEEYATLREANKKACEAVECILTDGIESGMNKYN 185
>gi|147669215|ref|YP_001214033.1| peptidyl-tRNA hydrolase [Dehalococcoides sp. BAV1]
gi|452203439|ref|YP_007483572.1| peptidyl-tRNA hydrolase [Dehalococcoides mccartyi DCMB5]
gi|189038288|sp|A5FRL3.1|PTH_DEHSB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|146270163|gb|ABQ17155.1| peptidyl-tRNA hydrolase [Dehalococcoides sp. BAV1]
gi|452110498|gb|AGG06230.1| peptidyl-tRNA hydrolase [Dehalococcoides mccartyi DCMB5]
Length = 189
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 91/162 (56%), Gaps = 4/162 (2%)
Query: 5 FAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLV 64
FA+ IS + C + G G + D ++LAKPQTYMNLSG++ L Y L ++V
Sbjct: 29 FAKENHISFDKKCCLSRTGSGRINDEEIVLAKPQTYMNLSGKAVNQLLRRYNLKAADIIV 88
Query: 65 FHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAF-- 122
DD+ LP G LRLR G GGHNG+ S++ + G +EF RL+IGIG+P + +
Sbjct: 89 VQDDLDLPAGKLRLRLGGSAGGHNGVSSIITDI-GTKEFIRLKIGIGKPDARNNGAEVVD 147
Query: 123 -LLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
+L F RE I+TA+ E L L++ GL ++ FN
Sbjct: 148 HVLGNFGGEEREIIETAIARAAEALACLITSGLDTASNRFNC 189
>gi|441517715|ref|ZP_20999448.1| peptidyl-tRNA hydrolase [Gordonia hirsuta DSM 44140 = NBRC 16056]
gi|441455368|dbj|GAC57409.1| peptidyl-tRNA hydrolase [Gordonia hirsuta DSM 44140 = NBRC 16056]
Length = 165
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 99/149 (66%), Gaps = 4/149 (2%)
Query: 15 TVHCK--ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLP 72
TVH K A +GD PVL+AK +TYMN +G GPLA YY + + V+V HD++ +
Sbjct: 15 TVHRKSGAEVATVRIGDQPVLVAKARTYMNTTGRQIGPLAKYYGVTPDEVIVLHDELDID 74
Query: 73 CGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIAR 132
G +RL+ GG GGHNGL+S+ G+R++AR+R+GIGRPPG+ DP A++L+ F + R
Sbjct: 75 FGQVRLKRGGGEGGHNGLRSLSQAL-GSRDYARVRLGIGRPPGRQDPAAYVLKPFPSADR 133
Query: 133 ERIDTALQEGVEVLKLLLSKGLTESARHF 161
++ + GV+ +LL+ +GL ESA++
Sbjct: 134 AEVELLIGNGVDAAELLVRQGL-ESAQNV 161
>gi|427405711|ref|ZP_18895916.1| peptidyl-tRNA hydrolase [Selenomonas sp. F0473]
gi|425708552|gb|EKU71591.1| peptidyl-tRNA hydrolase [Selenomonas sp. F0473]
Length = 209
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 90/166 (54%), Gaps = 1/166 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++DA A G + G+ + V L KPQTYMN SG + GP+ +YYK
Sbjct: 25 LVDALANRIGGLTWKEAFSSLVGETRIAGEKVFLVKPQTYMNDSGTALGPMLSYYKCEPA 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V HDDM +P G +R+R GG GGHNG+KS++ + G +F R+RIGIGRPP
Sbjct: 85 ELIVVHDDMDIPAGTVRIRRKGGSGGHNGIKSIIAHI-GGEDFPRVRIGIGRPPAGWTVI 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 166
+L F+ RI A+ + ++ +++ G+ + +N +K
Sbjct: 144 NHVLAPFSEEDAPRIREAIAYLLPAMECIVTDGVDMAMNRYNPQKK 189
>gi|94986155|ref|YP_605519.1| peptidyl-tRNA hydrolase [Deinococcus geothermalis DSM 11300]
gi|119390934|sp|Q1IWN4.1|PTH_DEIGD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|94556436|gb|ABF46350.1| Aminoacyl-tRNA hydrolase [Deinococcus geothermalis DSM 11300]
Length = 214
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 85/139 (61%), Gaps = 4/139 (2%)
Query: 27 VGDAP---VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGG 83
+G AP VLL KPQT+MN SG + GPL A+YKL +LV DD+ P G+L+ R G
Sbjct: 50 MGAAPGEKVLLVKPQTFMNSSGRAVGPLFAFYKLEPAALLVVQDDLDSPFGLLKFRLGGR 109
Query: 84 HGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGV 143
HGG NG++ ++ G ++FARL+IGI RPP +P ++L ++ A E + ++ G
Sbjct: 110 HGGQNGVRDIIRVL-GTQDFARLKIGISRPPAGWNPADWVLSRWRAEEAETLAELVRLGA 168
Query: 144 EVLKLLLSKGLTESARHFN 162
+ +++ +S GL E FN
Sbjct: 169 DAVEVWVSHGLAEGQARFN 187
>gi|410865574|ref|YP_006980185.1| Peptidyl-tRNA hydrolase [Propionibacterium acidipropionici ATCC
4875]
gi|410822215|gb|AFV88830.1| Peptidyl-tRNA hydrolase [Propionibacterium acidipropionici ATCC
4875]
Length = 200
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 96/164 (58%), Gaps = 4/164 (2%)
Query: 3 DAFAESQGISMNTVHCK---ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPL 59
+ + ++G+ T + A G PV+L + +TYMN SG + +A + ++P+
Sbjct: 38 ETLSSARGLRAETARTRISDAGLGMPAAQAVPVVLMRSRTYMNDSGVAVRKVADFDRIPV 97
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
R++V HD++ L G +R++ GG GHNGL+S+ ++ R +F R+R+G+GRPPG+ DP
Sbjct: 98 GRIIVVHDEIDLDLGRIRIKAGGGDNGHNGLRSMRSHLRSG-DFLRVRVGVGRPPGRQDP 156
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L+KF A R D + + ++ L+++GL + FN+
Sbjct: 157 ADYVLKKFAAGERAEADLQVSLAADAVECLMTQGLGAAQNRFNS 200
>gi|291546532|emb|CBL19640.1| peptidyl-tRNA hydrolase [Ruminococcus sp. SR1/5]
Length = 192
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 89/162 (54%), Gaps = 2/162 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PLN 60
+D E I V A +G+G +G +L KP +YMNLSG ++ Y+K+ P
Sbjct: 26 VDCLVEKHNIPQGGVKFNAMYGKGIIGGEKAILMKPLSYMNLSGGPIQEMSGYFKIDPET 85
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ L G LR+R G GGHNG+K ++ G +F R+R+G+G P D
Sbjct: 86 ELIVIYDDIDLEPGQLRIRKKGSAGGHNGIKDIIRRL-GTEKFIRIRVGVGAKPKDWDLA 144
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
F+L F+ R+ +D + + E ++++LS+G+ + +N
Sbjct: 145 DFVLGHFSDSDRKLVDEGINDAAEAVEMILSEGVDAAMNKYN 186
>gi|77164044|ref|YP_342569.1| peptidyl-tRNA hydrolase [Nitrosococcus oceani ATCC 19707]
gi|254435162|ref|ZP_05048669.1| peptidyl-tRNA hydrolase [Nitrosococcus oceani AFC27]
gi|119390970|sp|Q3JDQ7.1|PTH_NITOC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|76882358|gb|ABA57039.1| peptidyl-tRNA hydrolase [Nitrosococcus oceani ATCC 19707]
gi|207088273|gb|EDZ65545.1| peptidyl-tRNA hydrolase [Nitrosococcus oceani AFC27]
Length = 193
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 95/168 (56%), Gaps = 17/168 (10%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAP--------VLLAKPQTYMNLSGESTGPLA 52
+DAFA GI+ G F GD + L KP T+MN SG++ L
Sbjct: 29 WLDAFASELGINFKP-------GAKFFGDYARANWRGHDLWLLKPATFMNRSGQAVLALL 81
Query: 53 AYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGR 112
YY++PL +L+ HDD+ LP GV +L+ GGHGGHNGL+ ++N G R+F RLR+G+G
Sbjct: 82 NYYQIPLEHLLIAHDDLDLPPGVAKLKRAGGHGGHNGLRDIINRL-GRRDFLRLRLGVGH 140
Query: 113 PPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARH 160
P D +++L + + R+ I+ A+ G+EVL +L+ G E A H
Sbjct: 141 PGSGQDVVSYVLNRPSREDRQAIEAAIGAGLEVLPEVLA-GEMEKAMH 187
>gi|326390844|ref|ZP_08212396.1| peptidyl-tRNA hydrolase [Thermoanaerobacter ethanolicus JW 200]
gi|325993103|gb|EGD51543.1| peptidyl-tRNA hydrolase [Thermoanaerobacter ethanolicus JW 200]
Length = 184
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 93/162 (57%), Gaps = 3/162 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ G+++ + K+ G+G ++L KPQT+MN SGE+ +YK+PL
Sbjct: 25 VIDELAKKLGMNVTKLKFKSLVGEGNFKGEKIILLKPQTFMNSSGEALYDAVNFYKIPLE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V+V +DD L G +R+R G GGHNG+KS++ + EF R+RIGIG+P Q D
Sbjct: 85 NVIVIYDDKDLDVGKIRIRTKGSSGGHNGMKSII-YLLNSEEFPRVRIGIGKP--QEDLV 141
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+ +L KF ++ ID A+ + + + ++ G+ S FN
Sbjct: 142 SHVLGKFEESEKKLIDEAVIKAADAVIDIIENGIEHSMSKFN 183
>gi|302560228|ref|ZP_07312570.1| peptidyl-tRNA hydrolase [Streptomyces griseoflavus Tu4000]
gi|302477846|gb|EFL40939.1| peptidyl-tRNA hydrolase [Streptomyces griseoflavus Tu4000]
Length = 202
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 82/132 (62%), Gaps = 2/132 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+LAKP +YMNLSG L +YK+P+ RV+ HD++ + G LRL+ GG GHNGLK
Sbjct: 73 VVLAKPMSYMNLSGGPVNALREFYKVPVERVVAVHDELDIDYGTLRLKLGGGDNGHNGLK 132
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ F R++ R+R GIGRPPG+M F+L+ F + R+ +D + + ++ L+
Sbjct: 133 SMTKAF--GRDYHRVRFGIGRPPGRMQVADFVLKDFASAERKELDYFVDRAADAVECLVI 190
Query: 152 KGLTESARHFNT 163
+GL + +N+
Sbjct: 191 EGLERAQGTYNS 202
>gi|197302597|ref|ZP_03167652.1| hypothetical protein RUMLAC_01326 [Ruminococcus lactaris ATCC
29176]
gi|197298495|gb|EDY33040.1| aminoacyl-tRNA hydrolase [Ruminococcus lactaris ATCC 29176]
Length = 192
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 98/167 (58%), Gaps = 2/167 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PL 59
+ID A I ++ +A G+G + V+LAKPQTYMNLSGES + YYK+ P
Sbjct: 25 VIDRLAVRYNIDVDVKKHRALIGKGMIAGQKVILAKPQTYMNLSGESIRSILDYYKVDPE 84
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
++V +DD+ L G LR+R G GGHNG+K+++ + G F R+++G+G P + D
Sbjct: 85 TELIVIYDDISLDVGKLRIRAKGSAGGHNGIKNIIAHV-GGPVFPRIKVGVGEKPPKYDL 143
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 166
++L F+ +E ++ ++ V+ +++++S ++ + +N +K
Sbjct: 144 ADYVLGHFSKAEQELMEEGYEDAVKAVEMIVSGDISGAMNEYNRKKK 190
>gi|429205501|ref|ZP_19196773.1| peptidyl-tRNA hydrolase [Lactobacillus saerimneri 30a]
gi|428146112|gb|EKW98356.1| peptidyl-tRNA hydrolase [Lactobacillus saerimneri 30a]
Length = 185
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 85/147 (57%), Gaps = 2/147 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A++ G + A + F+ VLL KP TYMN SG + PL +YK+P+
Sbjct: 25 VVDELAQAYGATFAKEKMNALVTEIFIAGEKVLLVKPTTYMNESGRAVRPLMDFYKIPVE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+++ HDDM L G LRLR G GGHNG+KS++++ G + F RLR+GIG P +M
Sbjct: 85 DIIICHDDMDLDIGKLRLRQKGSAGGHNGIKSIISHV-GTQSFKRLRVGIGHPD-KMTVV 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLK 147
++L +F+ + I + +GV ++
Sbjct: 143 DWVLSRFSQAQKAVITDTIADGVAAIE 169
>gi|334119291|ref|ZP_08493377.1| Peptidyl-tRNA hydrolase [Microcoleus vaginatus FGP-2]
gi|333458079|gb|EGK86698.1| Peptidyl-tRNA hydrolase [Microcoleus vaginatus FGP-2]
Length = 220
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 103/172 (59%), Gaps = 14/172 (8%)
Query: 2 IDAFAESQGISMN-TVHCKATFGQGFVGDAP----VLLAKPQTYMNLSGESTGPLAAYYK 56
+DA A+S I+++ + TFG+G + P + L KP TYMNLSG++ +YK
Sbjct: 41 VDALAKSWQIALSENRKFQGTFGEG---NRPRGQKIRLLKPLTYMNLSGQAIRAATDWYK 97
Query: 57 LPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRP--- 113
+P VL+ +DDM LP G LR+R G GGHNG+KS +++ G +F RLRIGIG+P
Sbjct: 98 IPAESVLIVYDDMDLPIGKLRMRLAGSAGGHNGMKSTISHL-GTDKFPRLRIGIGKPQND 156
Query: 114 --PGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
+ D +F+L KF++ + ++ L+ VE ++L L +G+ ++ +N+
Sbjct: 157 SAKNEKDTISFVLGKFSSEESQLVEKVLKLVVEAVELSLHQGVEKAMSLYNS 208
>gi|326790210|ref|YP_004308031.1| peptidyl-tRNA hydrolase [Clostridium lentocellum DSM 5427]
gi|326540974|gb|ADZ82833.1| peptidyl-tRNA hydrolase [Clostridium lentocellum DSM 5427]
Length = 190
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 91/162 (56%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID+ AE+ I + KA G+ + V+L KPQTYMNLSGE+ ++K+
Sbjct: 25 VIDSLAEAYNIQVTKSKYKALIGEANIKGERVILMKPQTYMNLSGEAVRACMDFHKITNE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V V DD+ L G LRLR NG GGHNG+KS++ + G ++F+RL+ G+G P D
Sbjct: 85 EVFVIFDDVSLEVGQLRLRKNGSAGGHNGIKSIIAHI-GTQDFSRLKFGVGEKPAGWDLA 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F+ + I ++ V+ + ++ G+ ++ +N
Sbjct: 144 NYVLGRFSEDDLKIIGPRFKDAVDATTMFVTDGIDKAMNKYN 185
>gi|374578788|ref|ZP_09651882.1| peptidyl-tRNA hydrolase [Desulfosporosinus youngiae DSM 17734]
gi|374414870|gb|EHQ87305.1| peptidyl-tRNA hydrolase [Desulfosporosinus youngiae DSM 17734]
Length = 185
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 87/158 (55%), Gaps = 3/158 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D AE + + + G+V +LL KPQT+MNLSG S L +YK+
Sbjct: 25 LVDLLAEVHKLQFRS-KFQGLLADGYVEGERLLLLKPQTFMNLSGRSVIELIHFYKVAQE 83
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+L+ DDM LP G LRLR GG GGHNG+KS+ G+ + RL++G+GRPP D
Sbjct: 84 NILIVQDDMDLPLGKLRLRDQGGSGGHNGIKSIQAEL-GSEKIWRLKMGVGRPPKDWDSA 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 158
++L F E +D AL+ + + L + KG TE A
Sbjct: 143 RYVLAPFAEGELELLDGALERAEKAVYLWI-KGETERA 179
>gi|357391539|ref|YP_004906380.1| putative peptidyl-tRNA hydrolase [Kitasatospora setae KM-6054]
gi|311898016|dbj|BAJ30424.1| putative peptidyl-tRNA hydrolase [Kitasatospora setae KM-6054]
Length = 195
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 94/163 (57%), Gaps = 2/163 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+++ A+ G +A +G + V+LA+P ++MNLSG L +YK+P +
Sbjct: 35 VVELLAQRAGAKFKAHKSRAQVAEGRLAGRRVVLAEPMSFMNLSGGPVTALRDFYKVPTS 94
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++ HD++ L LRL+ GG GHNGLKS+ + ++ R+R GIGRPPG+M+
Sbjct: 95 AIVAVHDELDLDYAALRLKTGGGDNGHNGLKSMTKSL--GPDYHRVRCGIGRPPGRMEVA 152
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
F+L+ F++ R+ +D + + ++ LLS GL + +++N+
Sbjct: 153 DFVLKDFSSTERKDLDWFVDRAADAVEALLSDGLERAQQNYNS 195
>gi|150014977|ref|YP_001307231.1| peptidyl-tRNA hydrolase [Clostridium beijerinckii NCIMB 8052]
gi|189038283|sp|A6LPJ5.1|PTH_CLOB8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|149901442|gb|ABR32275.1| Aminoacyl-tRNA hydrolase [Clostridium beijerinckii NCIMB 8052]
Length = 191
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 89/152 (58%), Gaps = 9/152 (5%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ I +N K +G+GF+ V+L KP TYMNLSGES + +Y L +
Sbjct: 25 VIDNIAKEYNIEINRQKFKGMYGEGFINGKKVMLLKPTTYMNLSGESVREVVDFYNLNND 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNRE-FARLRIGIGRPPGQMDP 119
+LV +DD+ L G LR+R G GGHNG+KS++ + N E F+R+++G+G+P G D
Sbjct: 85 EILVIYDDISLEVGKLRIREKGSAGGHNGIKSIIAHL--NSEIFSRIKVGVGQPNG--DL 140
Query: 120 KAFLLQKF----NAIARERIDTALQEGVEVLK 147
+L KF AI E I+ + + E++K
Sbjct: 141 VKHVLGKFTKEETAILSESIEASTKAAAEIIK 172
>gi|89073086|ref|ZP_01159625.1| peptidyl-tRNA hydrolase [Photobacterium sp. SKA34]
gi|89051039|gb|EAR56496.1| peptidyl-tRNA hydrolase [Photobacterium sp. SKA34]
Length = 196
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 80/129 (62%)
Query: 37 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 96
P T+MNLSG+S LA ++++ +LV HD++ LP GV + + +GGHGGHNGL+ ++N
Sbjct: 66 PSTFMNLSGKSVAALANFFQIKPEEILVAHDELDLPPGVAKFKKSGGHGGHNGLRDIINK 125
Query: 97 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 156
N++F RLRI IG P + ++L K A +E ID A+ E V + +LL GLT+
Sbjct: 126 MGNNKDFYRLRIAIGHPGDKNRVAGYVLGKAPAKEQELIDAAVDESVRCIDILLKDGLTK 185
Query: 157 SARHFNTIQ 165
+ +T +
Sbjct: 186 AQNRLHTFK 194
>gi|335040913|ref|ZP_08534033.1| Peptidyl-tRNA hydrolase [Caldalkalibacillus thermarum TA2.A1]
gi|334179217|gb|EGL81862.1| Peptidyl-tRNA hydrolase [Caldalkalibacillus thermarum TA2.A1]
Length = 191
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 94/162 (58%), Gaps = 3/162 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D AE GIS+N ++ G+ V VLL KP TYMN SGE+ + +++ P+
Sbjct: 26 VDRLAEKLGISINQEKWRSLVGETSVSGEKVLLLKPLTYMNRSGEAVIEVVRFFQCPVED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
VLV +DD+ LP G +RLR GGHGGHNG++S++++ G++ F R+R+GIGRP D
Sbjct: 86 VLVIYDDLDLPFGTMRLRLKGGHGGHNGVRSLIDHL-GSQTFKRIRMGIGRPENG-DVVH 143
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLL-SKGLTESARHFN 162
++L F+ R+++ + G + L + T+ +N
Sbjct: 144 YVLNPFHPQERQQLAEFIDRGASAAEAYLDTDDFTQVMNRYN 185
>gi|452956509|gb|EME61900.1| peptidyl-tRNA hydrolase [Rhodococcus ruber BKS 20-38]
Length = 190
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 83/126 (65%), Gaps = 1/126 (0%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V++AKP+TYMNLSG LA ++ + ++V HD++ L G +RL+ GG GHNGL+
Sbjct: 61 VIIAKPRTYMNLSGGPVAGLARFFSVEPADIVVVHDELDLDFGTVRLKLGGGENGHNGLR 120
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ + G + + R R+GIGRPPG+MDP ++L+ F++ R+ +D ++ + ++LLL
Sbjct: 121 SISSAL-GTKLYLRTRVGIGRPPGRMDPADYVLKPFSSTERKELDLIREQAADAVELLLR 179
Query: 152 KGLTES 157
GL E+
Sbjct: 180 VGLEEA 185
>gi|329941175|ref|ZP_08290454.1| aminoacyl-tRNA hydrolase [Streptomyces griseoaurantiacus M045]
gi|329299706|gb|EGG43605.1| aminoacyl-tRNA hydrolase [Streptomyces griseoaurantiacus M045]
Length = 199
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 83/136 (61%), Gaps = 2/136 (1%)
Query: 28 GDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGH 87
G V+L KP +YMNLSG L +YK+PL+ V+ HD++ + GVLRL+ GG GH
Sbjct: 66 GSRRVVLVKPMSYMNLSGGPVNALREFYKVPLSHVVAVHDELDIDYGVLRLKRGGGDNGH 125
Query: 88 NGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 147
NGLKS+ E+ R+R GIGRPPG+M F+L+ F++ R+ +D + + ++
Sbjct: 126 NGLKSMTKAM--GAEYHRVRCGIGRPPGRMQVADFVLKDFSSAERKELDWFVDRAADAVE 183
Query: 148 LLLSKGLTESARHFNT 163
L+++GL + +N+
Sbjct: 184 CLVAEGLERAQNTYNS 199
>gi|363890536|ref|ZP_09317863.1| peptidyl-tRNA hydrolase [Eubacteriaceae bacterium CM5]
gi|363892231|ref|ZP_09319399.1| peptidyl-tRNA hydrolase [Eubacteriaceae bacterium CM2]
gi|361964181|gb|EHL17225.1| peptidyl-tRNA hydrolase [Eubacteriaceae bacterium CM2]
gi|361964912|gb|EHL17912.1| peptidyl-tRNA hydrolase [Eubacteriaceae bacterium CM5]
Length = 187
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID ++ I ++ + KA G+G ++L KPQT+MNLSGES + ++YK+
Sbjct: 26 IDILSKKLNIKVDKIKFKALIGEGQYKGEKIILVKPQTFMNLSGESVQQIMSFYKVEHQN 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+ V +DD+ + G LR+R G G HNG+K+++ G +F R RIG+ +PP MD +
Sbjct: 86 LFVLYDDIDIDVGKLRIRQKGSSGTHNGMKNII-YLLGYDDFPRFRIGVSKPPQYMDLAS 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F + + L + E + KGL +S +N
Sbjct: 145 YVLSNFTSEETNILSDVLDKCSEACLYAIEKGLDKSMNKYN 185
>gi|116333177|ref|YP_794704.1| peptidyl-tRNA hydrolase [Lactobacillus brevis ATCC 367]
gi|122270134|sp|Q03SZ9.1|PTH_LACBA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|116098524|gb|ABJ63673.1| peptidyl-tRNA hydrolase [Lactobacillus brevis ATCC 367]
Length = 185
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 85/151 (56%), Gaps = 2/151 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++DAFA+ GI++ T A FG G V VL+ KP T+MN SG + P+ Y+K+ +
Sbjct: 25 VVDAFAQQHGIALTTRKMDARFGSGLVNGEKVLVVKPTTFMNESGRAVHPIMDYFKIDVA 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V+V DDM LP G +RLR +G GGHNG+KS++ + G + F RL++GI P Q
Sbjct: 85 DVMVVQDDMDLPLGRIRLRDHGSAGGHNGIKSIIAHV-GTQNFGRLKVGIAHPQ-QHTVV 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
++L KF R + A V L ++
Sbjct: 143 DYVLGKFTTDQRPVFNQAADRAVAALDDWVA 173
>gi|410726039|ref|ZP_11364299.1| peptidyl-tRNA hydrolase [Clostridium sp. Maddingley MBC34-26]
gi|410601471|gb|EKQ55982.1| peptidyl-tRNA hydrolase [Clostridium sp. Maddingley MBC34-26]
Length = 191
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 87/151 (57%), Gaps = 7/151 (4%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A I +N K +G+GF+ V+L KP TYMNLSGES + +Y L
Sbjct: 25 VIDNIAREYNIELNRQKFKGIYGEGFIEGKKVMLLKPATYMNLSGESIREVVDFYNLDNT 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV +DD+ L G LR+R G GGHNG+KS++ + G+ F+R+++G+G+P G D
Sbjct: 85 EILVIYDDISLEVGTLRIREKGSAGGHNGIKSIIAHL-GSDVFSRIKVGVGQPKG--DLI 141
Query: 121 AFLLQKF----NAIARERIDTALQEGVEVLK 147
++L KF I + I+ + + E++K
Sbjct: 142 KYVLGKFTKEETVILNQVIEVSTKATAEIIK 172
>gi|354613091|ref|ZP_09031024.1| Peptidyl-tRNA hydrolase [Saccharomonospora paurometabolica YIM
90007]
gi|353222563|gb|EHB86867.1| Peptidyl-tRNA hydrolase [Saccharomonospora paurometabolica YIM
90007]
Length = 198
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 93/162 (57%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A+ G S A +G + D V+LAKP++YMNLSG A +Y + ++
Sbjct: 38 VLDELADRLGGSFKAHKGGAEVLEGRLADRGVVLAKPRSYMNLSGGPVAGTARFYSIAVD 97
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V+V HD++ L G ++L+ GG GHNGL+S+ + G R++ R+R G+GRPPG+M P
Sbjct: 98 GVVVIHDELDLDFGAVKLKFGGGDNGHNGLRSITKSL-GTRDYYRVRFGVGRPPGRMSPA 156
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L+ F+ + R+ + + + + L+ GL + F+
Sbjct: 157 DYVLKDFSTVERKDLAVHIDRCADAVTELVRSGLAAAQNAFH 198
>gi|317126793|ref|YP_004093075.1| peptidyl-tRNA hydrolase [Bacillus cellulosilyticus DSM 2522]
gi|315471741|gb|ADU28344.1| peptidyl-tRNA hydrolase [Bacillus cellulosilyticus DSM 2522]
Length = 204
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 86/162 (53%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID + + ++ K +G + + L KP T+MNLSGES PL Y+K+P
Sbjct: 44 VIDRCQQLFQLDLDQSKFKGIYGYKVIEGEKIFLLKPLTFMNLSGESVIPLMKYFKIPTE 103
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV +DD+ L G +RLR GG GGHNG+KS++++ G EF R+RIGIGRPP
Sbjct: 104 DLLVIYDDLDLAPGKIRLRQKGGAGGHNGMKSIISHL-GTEEFNRIRIGIGRPPKGYAVP 162
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F+ R +D +++ + + FN
Sbjct: 163 DYVLGSFSNEERNAVDESIETAAKAVDAWTKDSFINVMNTFN 204
>gi|182420017|ref|ZP_02951251.1| peptidyl-tRNA hydrolase [Clostridium butyricum 5521]
gi|237669562|ref|ZP_04529542.1| aminoacyl-tRNA hydrolase [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182376054|gb|EDT73641.1| peptidyl-tRNA hydrolase [Clostridium butyricum 5521]
gi|237655006|gb|EEP52566.1| aminoacyl-tRNA hydrolase [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 191
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 94/170 (55%), Gaps = 3/170 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A+ I +N K G+GF+ V+L KP TYMNLSGES + +YKL +
Sbjct: 25 VVDNIAKEYNIEINRQKFKGVCGEGFINGEKVILLKPTTYMNLSGESIREVVDFYKLSND 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
VLV +DD+ L G LR+R G GGHNG+KS++ + G F R+++G+G+P +D
Sbjct: 85 DVLVIYDDISLDVGRLRIREKGSAGGHNGIKSIIAHL-GTDIFPRIKVGVGQP--NVDLV 141
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHI 170
++L KF E ++ ++ + K ++S + + +N + K I
Sbjct: 142 NYVLGKFTKEEMEVLNESIDASTKAAKEIISNDVKTAMNIYNGFKASKSI 191
>gi|442805917|ref|YP_007374066.1| peptidyl-tRNA hydrolase Pth [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442741767|gb|AGC69456.1| peptidyl-tRNA hydrolase Pth [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 191
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 91/161 (56%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID + I + KA G+GF+ V+L KPQTYMN SGES + Y+ L L+R
Sbjct: 26 IDYLSVLYNIPVAKAKFKALVGEGFIEGEKVMLVKPQTYMNNSGESLREIVDYFNLSLDR 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DD+ L G +R+R G G HNG++S++ + + +F R+RIGIG+P Q D +
Sbjct: 86 LVVIYDDIDLDLGTIRIRSRGSAGTHNGMRSILYHLE-SEDFPRIRIGIGKPGPQQDLVS 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L K N RE + ++ ++ ++ G+ + FN
Sbjct: 145 YVLGKLNDDEREIMTEVIKRVALSVREIIVSGVDMAMSKFN 185
>gi|365154887|ref|ZP_09351285.1| peptidyl-tRNA hydrolase [Bacillus smithii 7_3_47FAA]
gi|363628998|gb|EHL79691.1| peptidyl-tRNA hydrolase [Bacillus smithii 7_3_47FAA]
Length = 187
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 88/163 (53%), Gaps = 1/163 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A + T K + G +LL KP TYMNLSGES + YYK+ +
Sbjct: 26 VIDELAHRLQSPLTTAKHKGIYTIVRSGGHQLLLLKPLTYMNLSGESIAEVMRYYKIDIE 85
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV +DD+ LP G +RLR G GGHNG+KSV+ + G +F R+RIGIGRP G
Sbjct: 86 NLLVVYDDLDLPPGKIRLRQKGSAGGHNGIKSVIQH-TGTEQFKRIRIGIGRPDGNNTVI 144
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L KF+ R ++ A+++ + L K E FN+
Sbjct: 145 DYVLGKFDKEQRLIMNEAVKKSADACLEWLEKPFPEVMNQFNS 187
>gi|115465271|ref|NP_001056235.1| Os05g0549600 [Oryza sativa Japonica Group]
gi|113579786|dbj|BAF18149.1| Os05g0549600 [Oryza sativa Japonica Group]
Length = 128
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 79/115 (68%)
Query: 51 LAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGI 110
L +Y+K+PL++VLV +DD+ +P LRL GGHGGHNG++S++N+ + +R+F RLRIGI
Sbjct: 7 LVSYFKIPLSQVLVIYDDLDIPFAKLRLLPKGGHGGHNGMRSIINHLKQSRDFPRLRIGI 66
Query: 111 GRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQ 165
GRP G++D F+L+ F +E ++ + ++ ++++L +G + A NT Q
Sbjct: 67 GRPTGKLDAIGFVLRSFTKEEQEELNLTINRSLQAVRIMLLEGFNKGATFVNTPQ 121
>gi|15807362|ref|NP_296093.1| peptidyl-tRNA hydrolase [Deinococcus radiodurans R1]
gi|14195089|sp|Q9RRW3.1|PTH_DEIRA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|6460187|gb|AAF11918.1|AE002068_1 peptidyl-tRNA hydrolase [Deinococcus radiodurans R1]
Length = 215
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 92/165 (55%), Gaps = 5/165 (3%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAP---VLLAKPQTYMNLSGESTGPLAAYYKL 57
++D A G S +A + +G AP VLL KPQT+MN SG++ PL ++YKL
Sbjct: 25 VVDELARRAGGSWRK-DGEAEVCEVRLGTAPGEKVLLVKPQTFMNTSGKAVWPLMSFYKL 83
Query: 58 PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQM 117
++LV DD+ P G+LR R G HGG NG++ ++ G F RL+IGI RPP
Sbjct: 84 EGEQLLVVQDDLDSPFGLLRFRLGGRHGGQNGVRDIIARL-GYDRFPRLKIGISRPPAGR 142
Query: 118 DPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
DP ++L K+ RE + ++ GV +L +GL E+ + +N
Sbjct: 143 DPADWVLSKWRDEERETLAELVRLGVGAAELWAVQGLAEAQQMYN 187
>gi|218290673|ref|ZP_03494764.1| Aminoacyl-tRNA hydrolase [Alicyclobacillus acidocaldarius LAA1]
gi|218239338|gb|EED06536.1| Aminoacyl-tRNA hydrolase [Alicyclobacillus acidocaldarius LAA1]
Length = 191
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 85/166 (51%), Gaps = 2/166 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PLN 60
ID AE ++ A G VLL KP TYMN+SG S G + YY++ P
Sbjct: 26 IDILAEKLAARVDQADFHALVGDARYAGEKVLLVKPHTYMNVSGLSVGEIVRYYRIDPAE 85
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DDM P GV+RL+ G GGHNG+KS++ + G +F R+RIGIGRPP
Sbjct: 86 DLMVLYDDMDFPPGVVRLKVQGSAGGHNGIKSIIESL-GTEKFGRVRIGIGRPPKGAPIV 144
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 166
++L F+ R+ L+ E + +G E+ +N +
Sbjct: 145 PYVLGAFSREEEPRVRRGLETAAEAALYAVERGFAEAMTRYNAAAR 190
>gi|428317242|ref|YP_007115124.1| peptidyl-tRNA hydrolase [Oscillatoria nigro-viridis PCC 7112]
gi|428240922|gb|AFZ06708.1| peptidyl-tRNA hydrolase [Oscillatoria nigro-viridis PCC 7112]
Length = 220
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 102/172 (59%), Gaps = 14/172 (8%)
Query: 2 IDAFAESQGISMN-TVHCKATFGQGFVGDAP----VLLAKPQTYMNLSGESTGPLAAYYK 56
+DA A+S IS++ + FG+G + P + L KP TYMNLSG++ +YK
Sbjct: 41 VDALAKSWQISLSENRKFQGIFGEG---NRPRGQKIRLLKPLTYMNLSGQAIRAATDWYK 97
Query: 57 LPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRP--- 113
+P VL+ +DDM LP G LR+R G GGHNG+KS +++ G +F RLRIGIG+P
Sbjct: 98 IPAESVLIVYDDMDLPIGKLRMRLAGSAGGHNGMKSTISHL-GTDKFPRLRIGIGKPQND 156
Query: 114 --PGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
+ D +F+L KF++ + ++ L+ VE ++L L +G+ ++ +N+
Sbjct: 157 AAKNEKDTISFVLGKFSSEESQLVEKVLKLVVEAVELSLHQGVEKAMSLYNS 208
>gi|350546384|ref|ZP_08915773.1| peptidyl-tRNA hydrolase [Mycoplasma iowae 695]
gi|349504038|gb|EGZ31592.1| peptidyl-tRNA hydrolase [Mycoplasma iowae 695]
Length = 189
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 86/162 (53%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID+ + IS+ T F + + + V + KPQTYMNLSGE +YK+P+
Sbjct: 27 VIDSLCKKINISLLTSKFNGVFSKANLYNKEVYICKPQTYMNLSGEFVSKFVNFYKIPIE 86
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
VLV +DD+ G ++L+ G GG NG+K+++ N G R++IGI RP +
Sbjct: 87 NVLVIYDDLDSEIGKIKLKTKGSSGGQNGIKNII-NLLGTESIKRIKIGISRPERNISIS 145
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L KFN + +++ ++ + + + L T++ FN
Sbjct: 146 GYVLSKFNNEDKTKVEKSIDKASDAILFYLENDFTQAMNKFN 187
>gi|307150148|ref|YP_003885532.1| peptidyl-tRNA hydrolase [Cyanothece sp. PCC 7822]
gi|306980376|gb|ADN12257.1| peptidyl-tRNA hydrolase [Cyanothece sp. PCC 7822]
Length = 210
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 96/163 (58%), Gaps = 3/163 (1%)
Query: 2 IDAFAESQGISMN-TVHCKATFGQGF-VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPL 59
+D A+S +S + F +G D + L KP TYMN SGES + +YKLP
Sbjct: 37 VDVLAKSWQLSWQQNKRFQGLFTEGMGASDKKIRLLKPLTYMNRSGESVRAVLDWYKLPP 96
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
+LV +DDM LP G +RLR +G GGHNG+KS++++ G+++F RLRIGIG+ G+ +
Sbjct: 97 ESILVIYDDMDLPLGRIRLRLSGSAGGHNGIKSIISHV-GSQDFPRLRIGIGKSNGKKET 155
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+ +L +F+A E I LQ + +K + +G+ ++ +N
Sbjct: 156 ISHVLGRFSADETEVIAKILQLVEQTVKTSMKEGIEKAMSLYN 198
>gi|402838558|ref|ZP_10887063.1| aminoacyl-tRNA hydrolase [Eubacteriaceae bacterium OBRC8]
gi|402272772|gb|EJU21988.1| aminoacyl-tRNA hydrolase [Eubacteriaceae bacterium OBRC8]
Length = 187
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 86/161 (53%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID ++ I ++ + KA G+G ++L KPQT+MNLSGES + ++YK+
Sbjct: 26 IDILSKKLNIKVDKIKFKALIGEGQYKGEKIILVKPQTFMNLSGESVQQIMSFYKVEHQN 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+ V +DD+ + G LR+R G G HNG+K+++ G +F R RIG+ +PP MD +
Sbjct: 86 LFVLYDDIDIDVGKLRIRQKGSSGTHNGMKNII-YLLGYDDFPRFRIGVSKPPQYMDLAS 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F + + L E + KGL +S +N
Sbjct: 145 YVLSNFTSEETNILSDVLDNCSEACLYAIEKGLDKSMNKYN 185
>gi|157363318|ref|YP_001470085.1| peptidyl-tRNA hydrolase [Thermotoga lettingae TMO]
gi|172045981|sp|A8F4D7.1|PTH_THELT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|157313922|gb|ABV33021.1| Aminoacyl-tRNA hydrolase [Thermotoga lettingae TMO]
Length = 187
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 91/165 (55%), Gaps = 5/165 (3%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+D F E + S + TF Q + L KP T+MNLSG + + +
Sbjct: 25 FVDRFKEFKKCSTWQHRDRYTFSQC----KDIFLVKPNTFMNLSGIAVIKCQRDFHVTTT 80
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ LPCG LR++ GG GGH GL+S++ ++ G EF RLRIGIG P +D
Sbjct: 81 DIIVVYDDVDLPCGRLRIKAQGGSGGHRGLQSII-DYIGTNEFVRLRIGIGPKPENIDLA 139
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQ 165
++L+ F ID L + VE + ++L++GL+++ FN+ +
Sbjct: 140 DYVLEDFTEEELRLIDKVLDKAVEAVDVMLNEGLSKAMSVFNSYE 184
>gi|363422862|ref|ZP_09310935.1| peptidyl-tRNA hydrolase [Rhodococcus pyridinivorans AK37]
gi|359732579|gb|EHK81592.1| peptidyl-tRNA hydrolase [Rhodococcus pyridinivorans AK37]
Length = 190
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 77/115 (66%), Gaps = 1/115 (0%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V++AKP+TYMNLSG LA ++ + + V+V HD++ L G +RL+ GG GHNGL+
Sbjct: 61 VIIAKPRTYMNLSGGPVASLAKFFSVDPSNVIVLHDELDLDFGTIRLKLGGGENGHNGLR 120
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 146
S + G +++ R+R+GIGRPPG+ DP F+L+ F+A R+ +D +EG + +
Sbjct: 121 STSSAL-GTKDYLRVRMGIGRPPGRQDPADFVLKPFSATERKELDVWCEEGADAV 174
>gi|429219948|ref|YP_007181592.1| peptidyl-tRNA hydrolase [Deinococcus peraridilitoris DSM 19664]
gi|429130811|gb|AFZ67826.1| peptidyl-tRNA hydrolase [Deinococcus peraridilitoris DSM 19664]
Length = 214
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 78/136 (57%), Gaps = 1/136 (0%)
Query: 27 VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGG 86
+G VLL KPQT+MN SG + PL +YKL L+ +LV DD+ P G+L++R G GG
Sbjct: 50 LGAQKVLLVKPQTFMNTSGRAVVPLVRFYKLALSDLLVVQDDLDSPFGLLKVRLGGRSGG 109
Query: 87 HNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 146
NGLK ++ G+ +FARL+IGI RPP D ++L K+ A + T + G
Sbjct: 110 QNGLKDIIRGL-GSEDFARLKIGISRPPPGWDVSGWVLSKWRAEEEATLRTLIDLGTRAA 168
Query: 147 KLLLSKGLTESARHFN 162
+ GL E+ R FN
Sbjct: 169 AIWAESGLLEAQRAFN 184
>gi|406573308|ref|ZP_11049060.1| peptidyl-tRNA hydrolase [Janibacter hoylei PVAS-1]
gi|404557240|gb|EKA62690.1| peptidyl-tRNA hydrolase [Janibacter hoylei PVAS-1]
Length = 193
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 100/157 (63%), Gaps = 1/157 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID AE G + T A +G ++ P +YMNLSG T LA+++ +P
Sbjct: 29 VIDHLAERAGARLRTHKAGAAAESVRLGSTRAIIGIPSSYMNLSGGPTKGLASFFSVPPE 88
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
R +V HD++ +P G +RL+ GG GGHNGL+S+ ++F G +++ R+R+GIGRPPG+MD
Sbjct: 89 RTIVVHDELDIPFGEVRLKLGGGEGGHNGLRSITSSF-GTKDYLRVRVGIGRPPGRMDAA 147
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 157
A++L+ F+A R+ + + + + ++LL+ KGLT++
Sbjct: 148 AYVLKDFSATERKELPFLVDDAADAVELLIDKGLTDA 184
>gi|94264422|ref|ZP_01288212.1| Aminoacyl-tRNA hydrolase [delta proteobacterium MLMS-1]
gi|93455179|gb|EAT05397.1| Aminoacyl-tRNA hydrolase [delta proteobacterium MLMS-1]
Length = 196
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 81/134 (60%), Gaps = 2/134 (1%)
Query: 1 MIDAFAESQGISM-NTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPL 59
ID A GIS+ +A G+G + PV+L KP TYMNLSG + G LA +Y++
Sbjct: 25 FIDHLARRHGISLKEESKWEAASGRGTLWGQPVMLVKPLTYMNLSGRAVGRLARFYRIEA 84
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
V VFHD++ LP G R+ G GGHNG++S++++ G+R+F R R+G+GRPP Q
Sbjct: 85 EAVAVFHDELDLPFGSARVAKGRGAGGHNGVRSLIDHL-GSRDFVRFRLGVGRPPEQHPT 143
Query: 120 KAFLLQKFNAIARE 133
++L F+ R+
Sbjct: 144 AGYVLSSFSPAERQ 157
>gi|260589952|ref|ZP_05855865.1| aminoacyl-tRNA hydrolase [Blautia hansenii DSM 20583]
gi|331084271|ref|ZP_08333376.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 6_1_63FAA]
gi|260539759|gb|EEX20328.1| aminoacyl-tRNA hydrolase [Blautia hansenii DSM 20583]
gi|330401806|gb|EGG81383.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 6_1_63FAA]
Length = 195
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 99/169 (58%), Gaps = 2/169 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PL 59
++D + I + KA +G+G +G V++ KP TYMNLSGES YYK+ P
Sbjct: 25 VVDELIDRHEIPQAGIAHKALYGKGIIGGEKVIVEKPLTYMNLSGESVREFIDYYKMDPE 84
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
++V +DD+ L G +R+R G GGHNG+K+++ G + F R+++G+G P D
Sbjct: 85 TEMIVIYDDIDLEPGQIRIRKKGSAGGHNGIKNIIAQL-GTQNFYRIKVGVGAKPKGWDL 143
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYK 168
++L +F++ RE +D A+Q+ + +++++ KG+ + H+N K K
Sbjct: 144 ADYVLGRFSSKEREVVDAAIQDAADAVEMIIEKGIDAAMNHYNGSGKKK 192
>gi|20808916|ref|NP_624087.1| peptidyl-tRNA hydrolase [Thermoanaerobacter tengcongensis MB4]
gi|22095992|sp|Q8R757.1|PTH_THETN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|20517576|gb|AAM25691.1| Peptidyl-tRNA hydrolase [Thermoanaerobacter tengcongensis MB4]
Length = 185
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 93/162 (57%), Gaps = 2/162 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+IDA ++ GI ++ + K+ G+G V+L KPQT+MNLSGE+ +YK+PL
Sbjct: 25 VIDALSKKLGIEVSRLKFKSLMGEGHFKGEKVILLKPQTFMNLSGEALYDAVNFYKIPLE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V+V +DD L G +R+R G GGHNG+ S++ + +F R+RIGIG+P D
Sbjct: 85 NVIVVYDDKDLEVGKIRIRRKGSSGGHNGMNSII-YLLNSEDFPRVRIGIGKPE-DGDLV 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+L +F+ ++ ID A++ E + ++ G+ + FN
Sbjct: 143 RHVLGRFSDEEKKVIDEAVERAAEAVIDIMENGIEHAMSRFN 184
>gi|149182809|ref|ZP_01861271.1| peptidyl-tRNA hydrolase [Bacillus sp. SG-1]
gi|148849476|gb|EDL63664.1| peptidyl-tRNA hydrolase [Bacillus sp. SG-1]
Length = 185
Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 85/162 (52%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ +N K + V+L KP TYMNLSGES PL Y+ +
Sbjct: 25 VIDELAKRFDSPLNQSKFKGVYASVHHKGEKVILLKPLTYMNLSGESIVPLMDYFDIDEE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ LP G +RLR G GGHNG+KS++ + G ++F R+R+GI RPP M
Sbjct: 85 DLVVIYDDLDLPVGKIRLRQKGSPGGHNGMKSIIAHL-GTQQFNRIRVGIDRPPSGMKVP 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F RE + ++ + + L K E FN
Sbjct: 144 DYVLGRFTPEERETMQDVIKASADACEAWLEKPFLEVMNSFN 185
>gi|260893904|ref|YP_003240001.1| peptidyl-tRNA hydrolase [Ammonifex degensii KC4]
gi|260866045|gb|ACX53151.1| peptidyl-tRNA hydrolase [Ammonifex degensii KC4]
Length = 195
Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 88/166 (53%), Gaps = 2/166 (1%)
Query: 1 MIDAFAESQGISM-NTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPL 59
++D A G+S V + + D V L KPQTYMNLSGE+ L +L
Sbjct: 30 VLDRLARQVGVSFAKEVKLCSRLAVLRLEDREVYLLKPQTYMNLSGEAVKLLVEKKELFP 89
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
+LV +DD+ LP G L+L +G GGH G+ SV+ + G RLR+GIGRPP +DP
Sbjct: 90 EEILVIYDDLDLPLGRLKLALSGSSGGHRGMGSVLESL-GTTSVPRLRLGIGRPPAGLDP 148
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQ 165
++L F RE +D L+ V ++ L +G+ ++ FN Q
Sbjct: 149 ATYVLSPFAPEEREELDRVLERAVAAVECALQEGMAQAMNKFNRRQ 194
>gi|431807724|ref|YP_007234622.1| peptidyl tRNA hydrolase [Brachyspira pilosicoli P43/6/78]
gi|430781083|gb|AGA66367.1| putative peptidyl tRNA hydrolase [Brachyspira pilosicoli P43/6/78]
Length = 198
Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 93/163 (57%), Gaps = 2/163 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A++ + + K+ F + + + +L KPQT+MNLSGES ++ ++ +
Sbjct: 26 IIDKLAQNLSLKFDNNKKKSLFTRAKLNNTDFILLKPQTFMNLSGESAIYISKFFNIKPE 85
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DDM +P G+ +++ G GGHNG+KS++ + + +F RLR+GIGRP
Sbjct: 86 DIIVIYDDMDIPFGIFKIKKGGSSGGHNGIKSLIAQLQTD-DFIRLRVGIGRPSFGKKVN 144
Query: 121 AFLLQKFNAIARERIDTALQEGV-EVLKLLLSKGLTESARHFN 162
++L F+ RE ID L E V E +K +L + T + +N
Sbjct: 145 DYVLSSFSKSERENIDNDLGENVIEAIKTILFESYTIAQNKYN 187
>gi|261367662|ref|ZP_05980545.1| aminoacyl-tRNA hydrolase [Subdoligranulum variabile DSM 15176]
gi|282570454|gb|EFB75989.1| aminoacyl-tRNA hydrolase [Subdoligranulum variabile DSM 15176]
Length = 197
Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 90/162 (55%), Gaps = 2/162 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D AE +N + +G VG+ V+L KP TYMNLSG+S P A +YK+P N
Sbjct: 36 LDYLAEQWQCPLNKSKWQGLYGTTQVGEHKVVLLKPLTYMNLSGQSIAPTANFYKIPANH 95
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIG-RPPGQMDPK 120
++V DD+ G LR+R +G GGHNGLKS++ + G EF+R+RIGIG +P Q D
Sbjct: 96 IIVLCDDITQQPGHLRIRPHGSAGGHNGLKSIIASL-GTEEFSRIRIGIGAKPNPQYDLA 154
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L K R+ + + + +LL+ L + FN
Sbjct: 155 VWVLGKLPPEDRKAMTDRYPDIEQACRLLMDDNLQYAQNKFN 196
>gi|350268690|ref|YP_004879998.1| peptidyl-tRNA hydrolase [Oscillibacter valericigenes Sjm18-20]
gi|348593532|dbj|BAK97492.1| peptidyl-tRNA hydrolase [Oscillibacter valericigenes Sjm18-20]
Length = 199
Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 76/114 (66%), Gaps = 1/114 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D AE Q + +N V K+ + G A VL+ KPQT+MNLSGE+ A +YK+P +R
Sbjct: 36 VDLLAEKQSVKLNKVKFKSAYNILRFGGARVLVMKPQTFMNLSGEAVHEAAQFYKIPADR 95
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPG 115
VLV +DD+ LP G LR+R +G GGHNG+K+++ + G +F R++IGIG P G
Sbjct: 96 VLVIYDDVSLPVGKLRVRPSGSAGGHNGIKNII-AYLGTDQFPRVKIGIGDPGG 148
>gi|420160718|ref|ZP_14667490.1| peptidyl-tRNA hydrolase [Weissella koreensis KCTC 3621]
gi|394746010|gb|EJF34815.1| peptidyl-tRNA hydrolase [Weissella koreensis KCTC 3621]
Length = 188
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 80/141 (56%), Gaps = 3/141 (2%)
Query: 2 IDAFAESQGISMNTVHCKATF-GQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
IDAFA+ GI F +G++G VLL KP TYMNLSGE+ PL +YY L +
Sbjct: 26 IDAFAQELGIKFKQDGPHHAFVAEGWIGTDKVLLVKPTTYMNLSGEAVAPLMSYYNLAIE 85
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+L+ DDM + G LRLR G GGHNG+KS+++ G + F RL+ GI P +
Sbjct: 86 DILIIQDDMDMELGRLRLRTKGSAGGHNGIKSIISQL-GTQSFNRLKFGIAHPKHEKQAV 144
Query: 121 A-FLLQKFNAIARERIDTALQ 140
F+L KFN +D +++
Sbjct: 145 INFVLGKFNKDDAITVDQSIE 165
>gi|154483283|ref|ZP_02025731.1| hypothetical protein EUBVEN_00984 [Eubacterium ventriosum ATCC
27560]
gi|149735793|gb|EDM51679.1| aminoacyl-tRNA hydrolase [Eubacterium ventriosum ATCC 27560]
Length = 184
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 94/163 (57%), Gaps = 4/163 (2%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PL 59
+ID A G+ + T KA G G +G V+L KPQTYMNLSGES + +YKL P
Sbjct: 25 VIDELASQMGVEVKTKRHKALCGIGNIGGEKVILVKPQTYMNLSGESVRAVMDFYKLDPE 84
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
N ++V DD+ L G +R+R G GGHNGLKS++N+ G ++F R+R+G+G G +
Sbjct: 85 NDIIVISDDINLATGRIRIRAQGSAGGHNGLKSIINH-AGTQKFKRVRVGVGANEGNL-- 141
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+L KF+ R + +++ +++++ + + + FN
Sbjct: 142 VNHVLGKFSKGERVLAEQGIKDAASAVEVMILEDINTAMNKFN 184
>gi|154496045|ref|ZP_02034741.1| hypothetical protein BACCAP_00329 [Bacteroides capillosus ATCC
29799]
gi|150274600|gb|EDN01664.1| aminoacyl-tRNA hydrolase [Pseudoflavonifractor capillosus ATCC
29799]
Length = 196
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 91/161 (56%), Gaps = 2/161 (1%)
Query: 3 DAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRV 62
D AE + I + + KA +G A VLL KP TYMNLSGE+ A +YK+ + V
Sbjct: 37 DELAERKNIPVQRLKFKALTNTTQLGGAQVLLMKPVTYMNLSGEAVRQAADFYKVSPDHV 96
Query: 63 LVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIG-RPPGQMDPKA 121
LV DD+ LP G LR+R +G GGHNGLK+++ G +F RL++G+G +P D
Sbjct: 97 LVVSDDVSLPVGRLRIRKSGSAGGHNGLKNIIQQL-GTDQFPRLKVGVGEKPHPDYDLAD 155
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L KF ++ ID A++ + ++ + G ++ FN
Sbjct: 156 WVLGKFVGEDKKTIDAAIKRAADAVECYIQDGPDKAMSRFN 196
>gi|336326183|ref|YP_004606149.1| peptidyl-tRNA hydrolase [Corynebacterium resistens DSM 45100]
gi|336102165|gb|AEI09985.1| Peptidyl-tRNA hydrolase [Corynebacterium resistens DSM 45100]
Length = 239
Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 85/140 (60%), Gaps = 1/140 (0%)
Query: 24 QGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGG 83
Q +G+ PV+LA+P+TYMN SG LA ++K+P RV+V +D++ L +R+R GG
Sbjct: 99 QSRIGETPVILARPRTYMNESGAPVANLAKFFKVPAERVIVIYDELDLDPEKVRVRMGGG 158
Query: 84 HGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGV 143
GHNGL+S+ G +E+ R+ +GIGRPPG+MD +++L+ F+ + A+ +
Sbjct: 159 DHGHNGLRSITKAL-GTKEYVRIALGIGRPPGRMDVASYVLKPFSKAENAWLPIAVADAA 217
Query: 144 EVLKLLLSKGLTESARHFNT 163
+ + + +G+ R+ +
Sbjct: 218 DATRACVQQGVEAGMRYAES 237
>gi|328949925|ref|YP_004367260.1| peptidyl-tRNA hydrolase [Marinithermus hydrothermalis DSM 14884]
gi|328450249|gb|AEB11150.1| Peptidyl-tRNA hydrolase [Marinithermus hydrothermalis DSM 14884]
Length = 194
Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 87/167 (52%), Gaps = 10/167 (5%)
Query: 1 MIDAFAESQGISMNTV--HCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLP 58
++D + G+ T A +G G+ L KP TYMNLSGE+ P YY++P
Sbjct: 27 ILDRLDQDLGLDWRTRGNALVARWGAGW-------LMKPLTYMNLSGEAVAPFVRYYRIP 79
Query: 59 LNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMD 118
L R+LV HDD+ LP G LR R G GG G+ S++ + G+ F RL++GIGRPP
Sbjct: 80 LARLLVVHDDLDLPLGRLRFRARGSSGGQRGVASIIAHL-GSEAFPRLKVGIGRPPAGWS 138
Query: 119 PKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQ 165
++L FN + + E +++ L +GL + + +N +
Sbjct: 139 APDWVLSPFNPEELPLVTRVVDRAAEGVRVWLEEGLARAQQRYNGLD 185
>gi|335424593|ref|ZP_08553601.1| peptidyl-tRNA hydrolase [Salinisphaera shabanensis E1L3A]
gi|334888931|gb|EGM27226.1| peptidyl-tRNA hydrolase [Salinisphaera shabanensis E1L3A]
Length = 196
Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 91/164 (55%), Gaps = 3/164 (1%)
Query: 1 MIDAFAESQGISMNTVH-CKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPL 59
+ D AE ++ ++ K + +G+A V L KP T+MN SG++ PL A++KL
Sbjct: 29 LADRLAERWRVAFSSERKFKGDLARRGMGEASVWLLKPATFMNRSGDAVQPLCAFHKLAP 88
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
VLV HD++ LP G R + +GGHGGHNGL+ + ++ RLRIGIG P +
Sbjct: 89 ESVLVVHDELDLPAGTARFKQSGGHGGHNGLRDITRVI--GTQYKRLRIGIGHPGDRSQV 146
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
+++L + R ID A+ G++ L++ L KG A+ N+
Sbjct: 147 LSYVLGTPSPDDRIEIDNAIDAGIDALEIALDKGWDYGAQKLNS 190
>gi|238922869|ref|YP_002936382.1| aminoacyl-tRNA hydrolase [Eubacterium rectale ATCC 33656]
gi|259535182|sp|C4ZBV8.1|PTH_EUBR3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238874541|gb|ACR74248.1| aminoacyl-tRNA hydrolase [Eubacterium rectale ATCC 33656]
gi|291523767|emb|CBK89354.1| peptidyl-tRNA hydrolase [Eubacterium rectale DSM 17629]
gi|291528768|emb|CBK94354.1| peptidyl-tRNA hydrolase [Eubacterium rectale M104/1]
Length = 186
Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 93/159 (58%), Gaps = 3/159 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PL 59
+IDA A+ IS+ KA G G + VLL KPQTYMNLSGES + +YKL P
Sbjct: 25 VIDALADKYNISVTDKKHKALCGSGVIEGMKVLLVKPQTYMNLSGESVAEVMNFYKLDPD 84
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
++V DD+ L G +R+R G GGHNG+KS++ G + F+R+++G+G P D
Sbjct: 85 EEMIVIFDDISLEPGRIRIRKKGSAGGHNGIKSIIA-MTGTQGFSRIKVGVGEKPQGWDL 143
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 158
+L +F++ R +++ A+ ++ +L+ +G T+ A
Sbjct: 144 ADHVLGRFSSEDRAKVEEAIGHAMDA-AVLMMQGETDKA 181
>gi|325282473|ref|YP_004255014.1| Peptidyl-tRNA hydrolase [Deinococcus proteolyticus MRP]
gi|324314282|gb|ADY25397.1| Peptidyl-tRNA hydrolase [Deinococcus proteolyticus MRP]
Length = 210
Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 87/148 (58%), Gaps = 4/148 (2%)
Query: 18 CKATFGQGFVGDA--PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGV 75
C+ GQG G A VLL KPQT+MN SG + PL +YY+L + +LV DD+ P G+
Sbjct: 46 CEVRLGQGG-GQAGEKVLLVKPQTFMNSSGRAVAPLLSYYRLAPDDLLVVQDDLDSPFGL 104
Query: 76 LRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERI 135
L+LR G HGG NGL+ ++ G ++F RL+IGI RPP DP ++L ++ R +
Sbjct: 105 LKLRRGGRHGGQNGLRDII-RLLGTQDFDRLKIGISRPPPGRDPADWVLSRWAEAERPVL 163
Query: 136 DTALQEGVEVLKLLLSKGLTESARHFNT 163
+ + G + ++ +G+ E+ FN+
Sbjct: 164 ERLVDLGAQAAEVWTLQGMQEAQGRFNS 191
>gi|429123607|ref|ZP_19184140.1| putative peptidyl-tRNA hydrolase [Brachyspira hampsonii 30446]
gi|426280440|gb|EKV57454.1| putative peptidyl-tRNA hydrolase [Brachyspira hampsonii 30446]
Length = 298
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 91/151 (60%), Gaps = 2/151 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID AE+ I+ + K+ + + + +L KPQT+MNLSGES ++ ++ +
Sbjct: 27 LIDKIAENFNINFDNNKKKSLYARSKENNIEYILLKPQTFMNLSGESAIFISKFFNIKPE 86
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V+V +DDM +P G +++ G GGHNG+KS++++ + + +F R+RIGIGRP
Sbjct: 87 DVIVIYDDMDIPFGTFKIKKGGSSGGHNGIKSLISHLQSD-DFTRIRIGIGRPSAGKKVN 145
Query: 121 AFLLQKFNAIARERIDTALQEG-VEVLKLLL 150
++L F+ RE +DTA+ + ++ +K+ L
Sbjct: 146 DYVLSNFSKKEREELDTAIADDIIDAVKIAL 176
>gi|363893678|ref|ZP_09320773.1| peptidyl-tRNA hydrolase [Eubacteriaceae bacterium ACC19a]
gi|361963480|gb|EHL16552.1| peptidyl-tRNA hydrolase [Eubacteriaceae bacterium ACC19a]
Length = 187
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 87/164 (53%), Gaps = 7/164 (4%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID ++ I ++ + KA G+G ++L KPQT+MNLSGES + ++YK
Sbjct: 26 IDILSKKLNIKVDKIKFKALIGEGQYKGEKIILVKPQTFMNLSGESVQQIMSFYKAEHQN 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+ V +DD+ + G LR+R G G HNG+K+++ G +F R RIG+ RPP MD +
Sbjct: 86 LFVLYDDIDIDIGKLRIRQKGSSGTHNGMKNII-YLLGYDDFPRFRIGVSRPPQYMDLAS 144
Query: 122 FLLQKFNAIARERID---TALQEGVEVLKLLLSKGLTESARHFN 162
++L F +E ID L E + KGL +S +N
Sbjct: 145 YVLSNF---TKEEIDILLNVLDNCSEACLYAIEKGLDKSMNKYN 185
>gi|288554662|ref|YP_003426597.1| peptidyl-tRNA hydrolase [Bacillus pseudofirmus OF4]
gi|288545822|gb|ADC49705.1| peptidyl-tRNA hydrolase [Bacillus pseudofirmus OF4]
Length = 185
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 87/162 (53%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ G+ ++ K +G + V KP TYMNLSGES PL Y+ + +
Sbjct: 25 IIDYCAKELGVELDQAKFKGVYGTKVINGEKVFFLKPLTYMNLSGESVRPLLDYFNIDIE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ LP G +RLR G GGHNG+KS++ + G +F R+R+GI RP
Sbjct: 85 DLVVIYDDLDLPAGKIRLRQKGSAGGHNGIKSLIQHL-GTDKFKRIRVGIDRPKNGEPIV 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L ++ RE ++ ++ + + ++ K E FN
Sbjct: 144 NYVLGTYHPDEREAVNESIVQAAKAVEAWTEKPFLEVMNQFN 185
>gi|256374802|ref|YP_003098462.1| peptidyl-tRNA hydrolase [Actinosynnema mirum DSM 43827]
gi|255919105|gb|ACU34616.1| peptidyl-tRNA hydrolase [Actinosynnema mirum DSM 43827]
Length = 189
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 91/162 (56%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A+ G A +G + V+LAKP+ YMN SG A +YK
Sbjct: 29 VLDELADRVGGRFKAHKGGAEVVEGRLAGQRVVLAKPRGYMNNSGGPVSGTAKFYKAQPA 88
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V+V HD++ LP G +RL+ GG GHNGL+S+ + G +++ R+R G+ RPPG+MDP
Sbjct: 89 SVIVVHDELDLPFGAVRLKLGGGDNGHNGLRSITRSL-GTKDYLRVRFGVDRPPGRMDPA 147
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L+ F+ + R+++ L + ++ L+S GL + F+
Sbjct: 148 DYVLKDFSVVERKQLALELDRAADAVEALVSSGLEAAQNQFH 189
>gi|402814487|ref|ZP_10864081.1| peptidyl-tRNA hydrolase Pth [Paenibacillus alvei DSM 29]
gi|402508334|gb|EJW18855.1| peptidyl-tRNA hydrolase Pth [Paenibacillus alvei DSM 29]
Length = 186
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID+ A+ GI + CKA G+G VG ++L KP TYMNLSGE+ YYK +
Sbjct: 26 IDSLADRFGIQVRESKCKALIGEGRVGTEKIVLIKPMTYMNLSGEAVRAYMDYYKADIED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+V +DDM G +RLR+ G GGHNG+KS++ + G + F R+R+GI RP
Sbjct: 86 FIVLYDDMDTELGKIRLRYQGSAGGHNGIKSLIQHL-GTQSFNRIRMGISRPEPGRSIVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F + + ++ + ++ L ++ +N
Sbjct: 145 YVLSTFPKAGADDLRQTIERTCDAVEFSLKHSFEQTMAKYN 185
>gi|373107098|ref|ZP_09521398.1| peptidyl-tRNA hydrolase [Stomatobaculum longum]
gi|371652037|gb|EHO17463.1| peptidyl-tRNA hydrolase [Stomatobaculum longum]
Length = 190
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 91/162 (56%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A +S KA G+ +LL KPQTYMNLSGES AA+Y++ +
Sbjct: 25 VIDRLAAKLEVSSWEKKHKALAGKAMYAGEKLLLLKPQTYMNLSGESLLSAAAFYRVTPD 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV DD+ L G LR+R +G GGHNGLKS+++N G+ +F R+R+G+G P D
Sbjct: 85 HILVISDDIDLAEGRLRIRKSGSAGGHNGLKSIISNL-GSGDFIRVRVGVGSKPAGFDLA 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L + E+++ A ++ E + +L +G+ + N
Sbjct: 144 DYVLGRAKGEDAEKMEQAYRDAAEAVLSILEEGVDRTMNKVN 185
>gi|429736222|ref|ZP_19270137.1| aminoacyl-tRNA hydrolase [Selenomonas sp. oral taxon 138 str.
F0429]
gi|429155820|gb|EKX98469.1| aminoacyl-tRNA hydrolase [Selenomonas sp. oral taxon 138 str.
F0429]
Length = 209
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 91/170 (53%), Gaps = 9/170 (5%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGF----VGDAPVLLAKPQTYMNLSGESTGPLAAYYK 56
++DA AE +N K F +G V L KP TYMN SGE+ GP+ +YYK
Sbjct: 25 LVDALAER----LNAPAWKEDFFSAVTEVRIGGEKVFLVKPLTYMNNSGEAIGPMLSYYK 80
Query: 57 LPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQ 116
+ + + V HDDM +P G +R+R G GGHNG+KS++ + G FAR+RIGIGRPP
Sbjct: 81 MAADDLTVVHDDMDIPAGTVRIRKKGSSGGHNGIKSIIAHV-GGENFARVRIGIGRPPAG 139
Query: 117 MDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 166
+L F A +I A+ + ++ +++ G+ +N +K
Sbjct: 140 WTVINHVLSPFLAEDVPKIREAISYLLPAVECIVTDGVDLVMNRYNPHKK 189
>gi|158338610|ref|YP_001519787.1| peptidyl-tRNA hydrolase [Acaryochloris marina MBIC11017]
gi|158308851|gb|ABW30468.1| peptidyl-tRNA hydrolase [Acaryochloris marina MBIC11017]
Length = 206
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 95/165 (57%), Gaps = 5/165 (3%)
Query: 2 IDAFAESQGISMNTVH-CKATFGQGFVGDAP-VLLAKPQTYMNLSGESTGPLAAYYKLPL 59
ID A+ IS+ + + +G+G G V L KP TYMN SG+S + ++KL
Sbjct: 33 IDRLAQHWQISLTSERRFQGEYGEGLGGQGRRVRLLKPHTYMNNSGQSIRAVIDWFKLEP 92
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQ--M 117
VLV +D+M LP G LRLR G GGHNG++S++++ G E RLRIGIG PP +
Sbjct: 93 TSVLVIYDEMALPVGKLRLRLKGSAGGHNGMRSIISHL-GTPEVPRLRIGIGSPPPERGK 151
Query: 118 DPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
D +F+L +F + + + L GV+ +++ L KG+ +S FN
Sbjct: 152 DTISFVLGRFAPLENQLLPAVLDLGVDAVEMALKKGIEQSMTLFN 196
>gi|403389193|ref|ZP_10931250.1| peptidyl-tRNA hydrolase [Clostridium sp. JC122]
Length = 190
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 92/162 (56%), Gaps = 3/162 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A I +N K +G+ + V+L KPQT+MNLSGES + +YK+P +
Sbjct: 25 IIDLLANEYNIDVNRQKFKGMYGETNINGEKVILLKPQTFMNLSGESVREVCDFYKIPND 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V+V +DD+ L G +R+R G GGHNG+K+++ + G F R++IG+G P G D
Sbjct: 85 NVIVIYDDISLEVGNIRIRPKGSAGGHNGIKNIIAHL-GTDVFPRVKIGVGGPAG--DLV 141
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+L KF+ RE ++ + + ++ ++S+ E+ FN
Sbjct: 142 NHVLGKFSKEERESLEKTFKPAIGAVETIISESTAEAMNKFN 183
>gi|153854682|ref|ZP_01995932.1| hypothetical protein DORLON_01930 [Dorea longicatena DSM 13814]
gi|149752786|gb|EDM62717.1| aminoacyl-tRNA hydrolase [Dorea longicatena DSM 13814]
Length = 194
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 91/163 (55%), Gaps = 2/163 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PL 59
+ID A+ IS++ +A G+G + VLL KPQTYMNLSGES L YYK+
Sbjct: 25 VIDMLADRYNISVDGRKGRALVGKGIIEGQKVLLVKPQTYMNLSGESLRELVNYYKIDEE 84
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
+ +LV +DD+ L G LR+R G GGHNG+K+++ N G F R++IG+G P + D
Sbjct: 85 HELLVIYDDISLDVGQLRIRKKGSAGGHNGIKNIIANL-GTDVFPRIKIGVGEKPKKYDL 143
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F+ RE ++ + ++L+ + + +N
Sbjct: 144 ADYVLGHFSKEDRELMEEGYDRADHAVGMILNGEIEAAMNQYN 186
>gi|406987407|gb|EKE07767.1| hypothetical protein ACD_17C00525G0003 [uncultured bacterium]
Length = 202
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 91/162 (56%), Gaps = 3/162 (1%)
Query: 2 IDAFAESQGISMNT-VHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+D A +S + K +G +G A VL+ KPQTYMNLSG + + YYK+ L+
Sbjct: 29 LDLLARKYNLSFQSKSDLKGLIAKGTLGGASVLMLKPQTYMNLSGHAVVAVMNYYKIELS 88
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
R+LV DD +P G LR+R N GGHNGLKSV + +ARLRIG+G P D
Sbjct: 89 RLLVLADDAAIPFGELRIRANSSSGGHNGLKSVEEAIHTDG-YARLRIGVGSPEAG-DLS 146
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F+ ++ + L V+ +++ L KGLT + + N
Sbjct: 147 DYVLGQFSKEEKKLLPEILGRVVQAVEIWLDKGLTSAMNYAN 188
>gi|427735456|ref|YP_007055000.1| peptidyl-tRNA hydrolase [Rivularia sp. PCC 7116]
gi|427370497|gb|AFY54453.1| peptidyl-tRNA hydrolase [Rivularia sp. PCC 7116]
Length = 219
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 96/167 (57%), Gaps = 7/167 (4%)
Query: 2 IDAFAESQGISMN-TVHCKATFGQGFV-GDAPVLLAKPQTYMNLSGESTGPLAAYYKLPL 59
IDA + S S++ K + + G V L KP TYMNLSG+S G + ++YKL
Sbjct: 41 IDALSRSWQASLSENRKFKGEYAETTAPGGKKVYLLKPLTYMNLSGQSIGAVLSWYKLKP 100
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRP--PGQM 117
VL+ +DDM LP G +RLR +G GGHNG+KS +++ G++ F RLRIGIGRP P
Sbjct: 101 ESVLIIYDDMDLPVGRVRLRLSGAAGGHNGMKSTISHL-GSKNFPRLRIGIGRPKNPATS 159
Query: 118 D--PKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
D + +L KF+ E + + L VE ++L L KG+ ++ N
Sbjct: 160 DNGTVSHVLGKFSPEENEVMSSVLNYVVECVELCLKKGVEKAMNDCN 206
>gi|258510198|ref|YP_003183632.1| peptidyl-tRNA hydrolase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257476924|gb|ACV57243.1| peptidyl-tRNA hydrolase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 191
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 85/166 (51%), Gaps = 2/166 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PLN 60
ID AE ++ A G VLL KP TYMN+SG S G + YY++ P
Sbjct: 26 IDILAEKLAARVDQADFHALVGDARYAGEKVLLVKPHTYMNVSGLSVGEIVRYYRIDPAE 85
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DDM P GV+RL+ G GGHNG+KS++ + G +F R+RIGIGRPP
Sbjct: 86 DLMVLYDDMDFPPGVVRLKAQGSAGGHNGIKSIIESL-GTEKFGRVRIGIGRPPKGAPIV 144
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 166
++L F+ + AL+ + + +G E+ +N +
Sbjct: 145 PYVLGAFSREEEPHVRRALETAADAALYAVERGFAEAMTRYNAAAR 190
>gi|300871524|ref|YP_003786397.1| putative peptidyl tRNA hydrolase [Brachyspira pilosicoli 95/1000]
gi|404476577|ref|YP_006708008.1| peptidyl tRNA hydrolase [Brachyspira pilosicoli B2904]
gi|434381585|ref|YP_006703368.1| putative peptidyl tRNA hydrolase [Brachyspira pilosicoli WesB]
gi|300689225|gb|ADK31896.1| putative peptidyl tRNA hydrolase [Brachyspira pilosicoli 95/1000]
gi|404430234|emb|CCG56280.1| putative peptidyl tRNA hydrolase [Brachyspira pilosicoli WesB]
gi|404438066|gb|AFR71260.1| putative peptidyl tRNA hydrolase [Brachyspira pilosicoli B2904]
Length = 198
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 92/163 (56%), Gaps = 2/163 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A++ + + K+ F + + + +L KPQT+MNLSGES ++ ++ +
Sbjct: 26 IIDKLAQNLSLKFDNNKKKSLFTRAKLNNTDFILLKPQTFMNLSGESAIYISKFFNIKPE 85
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DDM +P G +++ G GGHNG+KS++ + + +F RLR+GIGRP
Sbjct: 86 DIIVIYDDMDIPFGTFKIKKGGSSGGHNGIKSLIAQLQTD-DFIRLRVGIGRPSFGKKVN 144
Query: 121 AFLLQKFNAIARERIDTALQEGV-EVLKLLLSKGLTESARHFN 162
++L F+ RE ID L E V E +K +L + T + +N
Sbjct: 145 DYVLSSFSKSERENIDNDLGENVIEAIKTILFESYTIAQNKYN 187
>gi|348025512|ref|YP_004765316.1| peptidyl-tRNA hydrolase [Megasphaera elsdenii DSM 20460]
gi|341821565|emb|CCC72489.1| peptidyl-tRNA hydrolase [Megasphaera elsdenii DSM 20460]
Length = 189
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 86/166 (51%), Gaps = 2/166 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A+ +++ A Q V ++L KPQTYMN SG + GPL +YK+
Sbjct: 25 VVDELAKRWNVTLWQDKMDALVAQTTVNGEKIILVKPQTYMNESGRAVGPLMRWYKIDQP 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V V +DDM L G LR+R NG GGHNG+KS+ N G +F R R+GIGRP D
Sbjct: 85 DVYVAYDDMDLAVGRLRIRKNGSDGGHNGIKSLFAN--GCTDFTRFRVGIGRPLPHHDVV 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 166
+L F RE +++ ++ LS G+ + +N +K
Sbjct: 143 DHVLTPFPEELREAYQQGIEDAATAIEGCLSLGVDKGMNRYNPKKK 188
>gi|251794073|ref|YP_003008804.1| peptidyl-tRNA hydrolase [Paenibacillus sp. JDR-2]
gi|247541699|gb|ACS98717.1| peptidyl-tRNA hydrolase [Paenibacillus sp. JDR-2]
Length = 186
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A I + CKA G+G V V+L KP TYMNLSGES Y+K L
Sbjct: 25 VIDELARRWNIQVTQSKCKALIGEGNVQGTKVVLIKPMTYMNLSGESVRGFMDYFKADLE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
L+ +DDM G +RLR+ G GGHNG+KS++ + G ++F R+R+G+ RP +
Sbjct: 85 DGLIVYDDMDTEVGKVRLRYQGSAGGHNGIKSLIQHL-GTQQFNRIRMGVSRPQPGRNIA 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F +E + + +++ + ++ L + FN
Sbjct: 144 DYVLDNFPKSEQEALKSMIEQACDAVEYSLKASFDNTMAKFN 185
>gi|347751667|ref|YP_004859232.1| peptidyl-tRNA hydrolase [Bacillus coagulans 36D1]
gi|347584185|gb|AEP00452.1| peptidyl-tRNA hydrolase [Bacillus coagulans 36D1]
Length = 185
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 86/152 (56%), Gaps = 1/152 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+++ AE K + V VLL KP TYMNLSGES + YY+L
Sbjct: 25 VVNLLAERLQAPFKQSKFKGLCAETTVNSGKVLLLKPMTYMNLSGESVKAVMDYYRLGTG 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV +DD+ LP G +RLR G GGHNG+KS++++ G +EF R+RIGIGRP
Sbjct: 85 DLLVVYDDLDLPPGKIRLRQKGSAGGHNGIKSIIHHL-GTQEFNRIRIGIGRPDRDAYMP 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSK 152
++L +F+ RE++ A+++G + + L K
Sbjct: 144 DYVLGRFSKEDREKMQLAVEKGADACEAWLEK 175
>gi|441214878|ref|ZP_20976323.1| peptidyl-tRNA hydrolase [Mycobacterium smegmatis MKD8]
gi|440624998|gb|ELQ86851.1| peptidyl-tRNA hydrolase [Mycobacterium smegmatis MKD8]
Length = 191
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 99/154 (64%), Gaps = 6/154 (3%)
Query: 16 VHCK--ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPC 73
VH K A G + V+LAKP+ YMN SG GPLA +Y +P +++V HD++ +
Sbjct: 42 VHKKSGAEVVTGRLAGTSVVLAKPRCYMNESGRQVGPLAKFYSVPPQQIVVIHDELDIDF 101
Query: 74 GVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARE 133
G +RL+ GG GGHNGL+SV + G ++F R+RIG+GRPPG+ DP AF+L+ F A R
Sbjct: 102 GRIRLKLGGGEGGHNGLRSVASAL-GTKDFHRVRIGVGRPPGRKDPAAFVLENFTAAERA 160
Query: 134 RIDTALQEGVEVLKLLLSKGLTESARHFNTIQKY 167
+ T +++ + +LL+++GL E A+ NT+ +
Sbjct: 161 EVPTIVEQAADATELLIAQGL-EPAQ--NTVHAW 191
>gi|398785298|ref|ZP_10548322.1| peptidyl-tRNA hydrolase [Streptomyces auratus AGR0001]
gi|396994564|gb|EJJ05598.1| peptidyl-tRNA hydrolase [Streptomyces auratus AGR0001]
Length = 195
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 92/169 (54%), Gaps = 9/169 (5%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAP------VLLAKPQTYMNLSGESTGPLAAY 54
+ D AE G +A +G G AP V++AKP +YMN+SG T L +
Sbjct: 30 VADLLAERMGGRFKAHKARAQVVEGRCG-APGPESRRVVVAKPSSYMNVSGGPTTALRDF 88
Query: 55 YKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPP 114
YK+P+ ++ HD++ + G LRL+ GG GHNGLKS+ + E+ R+R GIGRPP
Sbjct: 89 YKVPVANIIAIHDELDIDYGALRLKLGGGDNGHNGLKSITKSL--GAEYHRVRFGIGRPP 146
Query: 115 GQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
G+M F+L+ F++ R +D + + ++ L+ GL + +N+
Sbjct: 147 GRMQVADFVLKDFSSAERRELDYFVDRAADAVETLIVDGLERAQSTYNS 195
>gi|302876605|ref|YP_003845238.1| peptidyl-tRNA hydrolase [Clostridium cellulovorans 743B]
gi|307687279|ref|ZP_07629725.1| peptidyl-tRNA hydrolase [Clostridium cellulovorans 743B]
gi|302579462|gb|ADL53474.1| peptidyl-tRNA hydrolase [Clostridium cellulovorans 743B]
Length = 188
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 93/164 (56%), Gaps = 3/164 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A+ I +N V K G+GF+ + V+L KP TYMNLSGE + +YK+P
Sbjct: 25 VVDILADKYNIQVNRVKFKGEIGEGFINNEKVILVKPTTYMNLSGECVREVMDFYKIPKE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ L G LR+R G GGHNG+K+++ + GN F R+++G+G P G +
Sbjct: 85 NLIVIYDDISLDVGKLRIRQKGSAGGHNGIKNILLHL-GNDVFPRVKVGVGAPKGNL--I 141
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTI 164
+L +F +E ++ + + +L+ G+ ++ +N I
Sbjct: 142 NHVLGRFQKEEQETMNKVYDVAAQGVLDILNLGVLDAMNKYNGI 185
>gi|163791050|ref|ZP_02185471.1| peptidyl-tRNA hydrolase [Carnobacterium sp. AT7]
gi|159873695|gb|EDP67778.1| peptidyl-tRNA hydrolase [Carnobacterium sp. AT7]
Length = 191
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 86/162 (53%), Gaps = 2/162 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D FA + N +A + + F+G VLL KPQT+MN SG + PL Y+ + +
Sbjct: 26 LDEFAFQHKMVFNKTKFEAIYAEAFIGSEKVLLVKPQTFMNDSGRAVRPLMDYFNVEIED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DD+ LP G LRLR G GGHNG+KS++ + +F R+RIGI RP G+
Sbjct: 86 LIVVYDDLDLPVGKLRLRQKGSAGGHNGIKSLIQHL-ATADFNRVRIGIDRPLGKQTVVQ 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLS-KGLTESARHFN 162
+L F E + A+++ V L + ++ FN
Sbjct: 145 HVLSGFPKNQHEELLLAIKDSVAALDYWIEGHSFSDVMNQFN 186
>gi|166031179|ref|ZP_02234008.1| hypothetical protein DORFOR_00865 [Dorea formicigenerans ATCC
27755]
gi|166029026|gb|EDR47783.1| aminoacyl-tRNA hydrolase [Dorea formicigenerans ATCC 27755]
Length = 203
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 90/163 (55%), Gaps = 2/163 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PL 59
+ID AE I+++ +A G+G + VLL KPQTYMNLSGES L Y+K+ P
Sbjct: 34 VIDKIAEKYNIAVDAKKGRAYVGKGIIEGQKVLLVKPQTYMNLSGESIRELVDYFKVDPK 93
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
+LV +DD+ L G +R+R G GGHNG+K+++ G F R+++G+G P D
Sbjct: 94 EELLVIYDDISLNPGQIRIRKKGSAGGHNGIKNIIAQL-GTDTFQRIKVGVGEKPKGYDL 152
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
A++L F+ E ++ ++ + + +L + + +N
Sbjct: 153 AAYVLGHFHGEDLELVEEGYEKAISATEEILKGEIDAAMNEYN 195
>gi|114565645|ref|YP_752799.1| aminoacyl-tRNA hydrolase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|119391030|sp|Q0B0S6.1|PTH_SYNWW RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|114336580|gb|ABI67428.1| peptidyl-tRNA hydrolase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 183
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 94/163 (57%), Gaps = 5/163 (3%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+++ A I A G + +LL KP T+MNLSG++ PL ++KL L+
Sbjct: 25 VLEELARRHQIEKEESRYDAIVGHLRINQEKLLLVKPLTFMNLSGKAVRPLFNWFKLELS 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPP-GQMDP 119
+LV +DDM LP G +R+R +GG GGH G++S+ + G+R+F R+RIGIGRPP G +D
Sbjct: 85 ELLVVYDDMDLPPGTVRIRASGGTGGHKGMQSICESL-GSRDFPRIRIGIGRPPGGAID- 142
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F+ + + A+++ ++ + G+ S +N
Sbjct: 143 --WVLGEFSESEKPLMQDAIEKAASAIECWVKSGIDASMNAYN 183
>gi|296169882|ref|ZP_06851494.1| aminoacyl-tRNA hydrolase [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295895438|gb|EFG75140.1| aminoacyl-tRNA hydrolase [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 191
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/124 (49%), Positives = 84/124 (67%), Gaps = 1/124 (0%)
Query: 31 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 90
PVL+AKP+ YMN SG GPLA +Y +P ++V HDD+ L G +RL+ GG GGHNGL
Sbjct: 59 PVLVAKPRCYMNESGRQVGPLAKFYSVPPADIVVVHDDLDLDFGRIRLKIGGGEGGHNGL 118
Query: 91 KSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 150
+SV + G +EF R+RIGIGRPPG+ DP AF+L+ F+A R + T ++ + +LL+
Sbjct: 119 RSVASAL-GTKEFQRVRIGIGRPPGRKDPAAFVLENFSAAERGDVPTICEQAADATELLV 177
Query: 151 SKGL 154
GL
Sbjct: 178 ELGL 181
>gi|410453264|ref|ZP_11307222.1| peptidyl-tRNA hydrolase [Bacillus bataviensis LMG 21833]
gi|409933387|gb|EKN70315.1| peptidyl-tRNA hydrolase [Bacillus bataviensis LMG 21833]
Length = 186
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 84/162 (51%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID + I +N K +G G VLL KP TYMNLSGES + YY++ L
Sbjct: 25 VIDTLSNQFSIPLNQSKFKGLYGIGHYKGEKVLLLKPLTYMNLSGESIRAVMDYYQIELE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ LP G RLR G GGHNG+KS + + G +EF R+RIGI RP M
Sbjct: 85 DLVVIYDDLDLPVGKTRLRQKGSPGGHNGIKSTVAHL-GTQEFNRIRIGIDRPQAGMSVP 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F + + A++ + L K + +N
Sbjct: 144 DYVLGRFRPDEKPLTEEAVKRSADACSSWLEKPFLQVMNEYN 185
>gi|302519767|ref|ZP_07272109.1| peptidyl-tRNA hydrolase [Streptomyces sp. SPB78]
gi|302428662|gb|EFL00478.1| peptidyl-tRNA hydrolase [Streptomyces sp. SPB78]
Length = 267
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 82/132 (62%), Gaps = 2/132 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V++AKP +YMNLSG L +YK+PL RV+ HD++ + GVLRL+ GG GHNGLK
Sbjct: 73 VVVAKPLSYMNLSGGPVTALRDFYKVPLERVVAVHDELDIDYGVLRLKLGGGDNGHNGLK 132
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ + R+R GIGRPPG+M F+L+ F++ R+ +D + + ++ L++
Sbjct: 133 SMTKAM--GPAYHRVRFGIGRPPGRMQVADFVLKDFSSSERKELDYFVDRAADAVEALVT 190
Query: 152 KGLTESARHFNT 163
+GL + FN+
Sbjct: 191 QGLERAQGSFNS 202
>gi|227509304|ref|ZP_03939353.1| peptidyl-tRNA hydrolase [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
gi|227191234|gb|EEI71301.1| peptidyl-tRNA hydrolase [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
Length = 189
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 82/151 (54%), Gaps = 1/151 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+++ FA+ GIS+ T A G FV VL+ +P T+MN SG + PL +Y+++
Sbjct: 28 VVEEFAKKHGISIKTRKMNAKMGSAFVNGQKVLVVEPTTFMNDSGIAVKPLMSYFEIENK 87
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V+V HDDM LP G +R++ G GGHNG+KS++NN G F+R+R+GI P
Sbjct: 88 DVIVVHDDMDLPIGKIRIKDKGSAGGHNGIKSLINNL-GTEHFSRIRVGIAHPDKNNTVV 146
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
++L +F+ A V L+ L
Sbjct: 147 NYVLGRFSKSQLPEFKIATDNAVNALEDWLD 177
>gi|337286885|ref|YP_004626358.1| peptidyl-tRNA hydrolase [Thermodesulfatator indicus DSM 15286]
gi|335359713|gb|AEH45394.1| peptidyl-tRNA hydrolase [Thermodesulfatator indicus DSM 15286]
Length = 189
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 76/130 (58%), Gaps = 1/130 (0%)
Query: 33 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 92
L KPQT+MNLSGE+ P + K+ R+LV HDD+ LP G L+ GG GGH G+KS
Sbjct: 57 FLVKPQTFMNLSGEAVAPWSRKLKISSERILVIHDDLDLPLGRLKFVPKGGAGGHRGVKS 116
Query: 93 VMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 152
V++ G +EF RL++GIGRPP + + ++L F+ + L+ VE L LL
Sbjct: 117 VIDAL-GTKEFPRLKLGIGRPPQGVTVREYVLSPFSESEIPLVKKVLERAVEALDYLLEH 175
Query: 153 GLTESARHFN 162
L ++ FN
Sbjct: 176 DLPKTMSTFN 185
>gi|404214056|ref|YP_006668250.1| Peptidyl-tRNA hydrolase [Gordonia sp. KTR9]
gi|403644855|gb|AFR48095.1| Peptidyl-tRNA hydrolase [Gordonia sp. KTR9]
Length = 186
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 103/167 (61%), Gaps = 7/167 (4%)
Query: 3 DAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
D S G VH K A + +G PVL+AKP+TYMN SG GPLA +Y + ++
Sbjct: 25 DGLVASAGARWK-VHKKSGAEVAEVRLGGQPVLVAKPRTYMNESGRQIGPLAKFYSVSVD 83
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V HD++ + G +RL+ GG GGHNGL+S+ G R++ R+RIGIGRPPG+ DP
Sbjct: 84 DLIVVHDELDIDFGAVRLKRGGGEGGHNGLRSLSQAL-GTRDYLRVRIGIGRPPGRQDPA 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKY 167
F+L+ F + AR ++ + G + ++LL+ + L ESA+ NT+ +
Sbjct: 143 DFVLKPFPSSARSEVELLIANGCDAVELLVGQDL-ESAQ--NTVHAW 186
>gi|291453573|ref|ZP_06592963.1| peptidyl-tRNA hydrolase [Streptomyces albus J1074]
gi|359149694|ref|ZP_09182663.1| peptidyl-tRNA hydrolase [Streptomyces sp. S4]
gi|421744064|ref|ZP_16182071.1| peptidyl-tRNA hydrolase [Streptomyces sp. SM8]
gi|291356522|gb|EFE83424.1| peptidyl-tRNA hydrolase [Streptomyces albus J1074]
gi|406687525|gb|EKC91539.1| peptidyl-tRNA hydrolase [Streptomyces sp. SM8]
Length = 195
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 84/146 (57%), Gaps = 2/146 (1%)
Query: 18 CKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLR 77
+A G G ++LAKPQ+YMNLSG L +YK+P R++ HD++ + G LR
Sbjct: 52 LEARIGAPGPGSRRIVLAKPQSYMNLSGGPVTALRDFYKVPTERIVAVHDELDIDYGALR 111
Query: 78 LRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDT 137
L+ GG GHNGLKS+ + ++ R+R GIGRPPG+M F+L+ F++ R+ +D
Sbjct: 112 LKLGGGDNGHNGLKSMTKSL--GPDYHRVRFGIGRPPGRMQVADFVLKDFSSTERKELDY 169
Query: 138 ALQEGVEVLKLLLSKGLTESARHFNT 163
+ + ++ L+ GL + +N
Sbjct: 170 FVDRAADAVEALVVAGLERAQSSYNA 195
>gi|94265982|ref|ZP_01289705.1| Aminoacyl-tRNA hydrolase [delta proteobacterium MLMS-1]
gi|93453448|gb|EAT03864.1| Aminoacyl-tRNA hydrolase [delta proteobacterium MLMS-1]
Length = 196
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 81/134 (60%), Gaps = 2/134 (1%)
Query: 1 MIDAFAESQGISM-NTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPL 59
ID A GIS+ +A G+G + PV+L KP TYMNLSG + G LA +Y++
Sbjct: 25 FIDHLALRHGISLKEESKWEAASGRGTLWGQPVMLVKPLTYMNLSGRAVGRLARFYRIEA 84
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
V VFHD++ LP G R+ G GGHNG++S++++ G+R+F R R+G+GRPP Q
Sbjct: 85 EAVAVFHDELDLPFGSARVAKGRGAGGHNGVRSLIDHL-GSRDFVRFRLGVGRPPEQHPT 143
Query: 120 KAFLLQKFNAIARE 133
++L F+ R+
Sbjct: 144 AGYVLSSFSPEERQ 157
>gi|253681331|ref|ZP_04862129.1| aminoacyl-tRNA hydrolase [Clostridium botulinum D str. 1873]
gi|416348999|ref|ZP_11680559.1| peptidyl-tRNA hydrolase [Clostridium botulinum C str. Stockholm]
gi|253562569|gb|EES92020.1| aminoacyl-tRNA hydrolase [Clostridium botulinum D str. 1873]
gi|338196606|gb|EGO88792.1| peptidyl-tRNA hydrolase [Clostridium botulinum C str. Stockholm]
Length = 190
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 92/162 (56%), Gaps = 2/162 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID AE I +N K +G G + V+L KP TYMNLSGES + +YK+
Sbjct: 25 VIDLLAEKHNIELNRKKFKGMYGDGNIAGEKVILLKPLTYMNLSGESVREIMDFYKITNE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ L G +R+R G GGHNG+K+++ + N F+R+++G+G+P + +
Sbjct: 85 DIIVIYDDISLEVGRMRIREKGSAGGHNGIKNIIAHLN-NDYFSRVKVGVGQPV-KTNLV 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+ +L KF +++ + + +++++ KG E+ FN
Sbjct: 143 SHVLGKFEKEDECKLNKTFEAACKAVQIIIEKGTAEAMNKFN 184
>gi|403743480|ref|ZP_10953064.1| peptidyl-tRNA hydrolase [Alicyclobacillus hesperidum URH17-3-68]
gi|403122724|gb|EJY56923.1| peptidyl-tRNA hydrolase [Alicyclobacillus hesperidum URH17-3-68]
Length = 190
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 89/164 (54%), Gaps = 2/164 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ G+ ++ ++ G+ + PVLL KPQTYMN+SG + + +YKL + +
Sbjct: 26 IDNAAQRLGVVVDRAKFQSLIGEARIAGEPVLLVKPQTYMNVSGVAAAEIVRFYKLDVEQ 85
Query: 62 -VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV +DDM P G L+LR G GGHNG+KS++ + G F R+RIGIGRPP D
Sbjct: 86 DILVIYDDMDFPPGQLKLRARGSAGGHNGVKSLIQSL-GTDTFCRIRIGIGRPPRGSDII 144
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTI 164
++L F R R++ A E + G + +N +
Sbjct: 145 PYVLGTFPEEERVRVEKAAAAAAEAAMHAVEHGFEHAMNQYNRV 188
>gi|379734255|ref|YP_005327760.1| peptidyl-tRNA hydrolase [Blastococcus saxobsidens DD2]
gi|378782061|emb|CCG01718.1| peptidyl-tRNA hydrolase [Blastococcus saxobsidens DD2]
Length = 195
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 98/157 (62%), Gaps = 4/157 (2%)
Query: 1 MIDAFAESQGISM---NTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL 57
++D A GI+ +A G+G + V+LA+P TYMN SG L YYKL
Sbjct: 29 VLDELARRAGITPAPGKGARARAVAGEGRLAGRRVVLAQPLTYMNESGSPVRGLLDYYKL 88
Query: 58 PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQM 117
P ++++V HD++ +P G +RL+ GG GGHNGL+S+ + G +E+ R+R+GIGRPPG+
Sbjct: 89 PADQLVVLHDELDIPFGSVRLKRGGGEGGHNGLRSITRSA-GTKEYLRVRVGIGRPPGRQ 147
Query: 118 DPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 154
DP F+L+ F+A R+ +D L E + ++ LL+ GL
Sbjct: 148 DPADFVLKDFSATERKELDLLLVEAADAVEELLTLGL 184
>gi|440704383|ref|ZP_20885236.1| aminoacyl-tRNA hydrolase [Streptomyces turgidiscabies Car8]
gi|440273959|gb|ELP62625.1| aminoacyl-tRNA hydrolase [Streptomyces turgidiscabies Car8]
Length = 198
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 83/132 (62%), Gaps = 2/132 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+LAKP +YMNLSG L +YK+ L+RV+ HD++ + GVLRL+ GG GHNGLK
Sbjct: 69 VILAKPMSYMNLSGGPVNALREFYKVSLDRVVAVHDELDIDYGVLRLKLGGGDNGHNGLK 128
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ ++ R+R GIGRPPG+M F+L+ F++ R+ +D + + ++ L++
Sbjct: 129 SMTKAM--GPDYHRVRFGIGRPPGRMQVADFVLKDFSSAERKELDYFVDRATDAVESLVT 186
Query: 152 KGLTESARHFNT 163
+GL + +N+
Sbjct: 187 EGLERAQGAYNS 198
>gi|325295184|ref|YP_004281698.1| peptidyl-tRNA hydrolase [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325065632|gb|ADY73639.1| Peptidyl-tRNA hydrolase [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 189
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 84/154 (54%), Gaps = 2/154 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAP-VLLAKPQTYMNLSGESTGPLAAYYKLPL 59
++D AE G + K + D + L KP TYMNLSGES G LA +YK+
Sbjct: 26 VLDRLAEVLGTDFSKEKFKGKIAELRNDDGKKIFLLKPITYMNLSGESVGELAKFYKIKP 85
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
LV +DD+ LP G LRLR G GGH G+ S+ F G++ F+RLRIGIGRP + +
Sbjct: 86 EETLVIYDDLDLPLGKLRLRLKGSSGGHKGVASIEQCF-GSQNFSRLRIGIGRPQTKEEV 144
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 153
++L F E + A+ + V LK ++ KG
Sbjct: 145 VNYVLSPFREDELEALGKAIDKAVSCLKEVIKKG 178
>gi|146296228|ref|YP_001179999.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|167011991|sp|A4XIS3.1|PTH_CALS8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|145409804|gb|ABP66808.1| Aminoacyl-tRNA hydrolase [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 189
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 90/161 (55%), Gaps = 3/161 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A++ ++ + K G D VLL KP TYMN SG+S +YK+ +
Sbjct: 27 IDYLAQAFNTKVDKIKFKGLTGSFEYADKKVLLLKPMTYMNSSGDSIVEAVNFYKVKPEK 86
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DD+ GV+++R G GGHNG+KS++ G EF R+RIGIG P + D
Sbjct: 87 LIVIYDDIAFDVGVVKMRKKGSDGGHNGVKSIIQRL-GTEEFPRIRIGIGVP--KEDMVK 143
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F +++I A+++ + +K+LL G+ + + N
Sbjct: 144 YVLSEFEDYEKQKIFRAIEKAAQGIKILLESGIDRAMNYIN 184
>gi|421770634|ref|ZP_16207325.1| Peptidyl-tRNA hydrolase [Lactobacillus rhamnosus LRHMDP2]
gi|421772806|ref|ZP_16209459.1| Peptidyl-tRNA hydrolase [Lactobacillus rhamnosus LRHMDP3]
gi|411181740|gb|EKS48903.1| Peptidyl-tRNA hydrolase [Lactobacillus rhamnosus LRHMDP2]
gi|411183220|gb|EKS50360.1| Peptidyl-tRNA hydrolase [Lactobacillus rhamnosus LRHMDP3]
Length = 185
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 84/151 (55%), Gaps = 2/151 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A+ G+++N + A V D V L KPQTYMN SG + L YY++ L+
Sbjct: 25 VVDGLAQRMGLTLNKLEFDAATATTCVDDEKVFLVKPQTYMNASGRAVRQLMMYYQIRLD 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV HDDM L G LRLR G GGHNG+K +++ G+ EF RL+IGI P Q
Sbjct: 85 EILVVHDDMDLTLGKLRLRQRGSAGGHNGIKDIISA-TGSDEFYRLKIGIQHPQRQR-VV 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
++L F + ID AL + + L+ L+
Sbjct: 143 DWVLTPFAKTDQPVIDAALTKADDALEDWLN 173
>gi|374321392|ref|YP_005074521.1| peptidyl-tRNA hydrolase [Paenibacillus terrae HPL-003]
gi|357200401|gb|AET58298.1| peptidyl-tRNA hydrolase [Paenibacillus terrae HPL-003]
Length = 186
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 86/161 (53%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+DA A I +N CKA G+G +G +L KP TYMNLSGES YYK ++
Sbjct: 26 LDALAARHNIQINQSKCKALIGEGHIGGMKTVLIKPMTYMNLSGESLRAYMDYYKADIDD 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DD+ G +RLR+ G GGHNG+KS++ + G + F R+R+GI RP
Sbjct: 86 LVVVYDDLDTEVGKIRLRYQGSAGGHNGIKSIIQH-TGTQSFNRVRMGISRPEPGYAIVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F +E + +++ + L+ L + FN
Sbjct: 145 YVLGTFPKKEKELLAGMIEDTCDALEYSLGHPFERTMAEFN 185
>gi|336437123|ref|ZP_08616832.1| hypothetical protein HMPREF0988_02417 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336006257|gb|EGN36293.1| hypothetical protein HMPREF0988_02417 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 245
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 95/167 (56%), Gaps = 2/167 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PL 59
+ID AE I+++ +A G+G +G V+LAKPQTYMNLSGES L YYK+
Sbjct: 78 VIDRIAEKYNIAVDGKKHRALIGKGMIGGQKVILAKPQTYMNLSGESVRSLLDYYKVDET 137
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
+LV +DD+ + G +R+R G GGHNG+K+++ + G + F R+++G+G P + D
Sbjct: 138 EELLVIYDDISMENGQIRIRAKGSAGGHNGIKNIIAHLNG-QVFPRIKVGVGEKPPRYDL 196
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 166
++L F+ +E ++ + + ++ +T + +N +K
Sbjct: 197 ADYVLGHFSKAEQELMEEGYDHALHAAEQIIDGEITAAMNEYNRKKK 243
>gi|407275963|ref|ZP_11104433.1| peptidyl-tRNA hydrolase [Rhodococcus sp. P14]
Length = 190
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 83/126 (65%), Gaps = 1/126 (0%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V++AKP+T+MNLSG LA ++ + ++V HD++ L G +RL+ GG GHNGL+
Sbjct: 61 VIIAKPRTFMNLSGGPVAGLARFFSVEPADIVVVHDELDLDFGTVRLKLGGGENGHNGLR 120
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ + G + + R R+GIGRPPG+MDP ++L+ F++ R+ +D ++ + ++LLL
Sbjct: 121 SISSAL-GTKLYLRTRVGIGRPPGRMDPADYVLKPFSSTERKELDLIREQAADAVELLLR 179
Query: 152 KGLTES 157
GL ++
Sbjct: 180 VGLEDA 185
>gi|373464508|ref|ZP_09556045.1| aminoacyl-tRNA hydrolase [Lactobacillus kisonensis F0435]
gi|371762363|gb|EHO50897.1| aminoacyl-tRNA hydrolase [Lactobacillus kisonensis F0435]
Length = 186
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 86/157 (54%), Gaps = 2/157 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+++ FA++ GI++ T A +G GF+ + V++ +P T+MN SG + PL Y+ +P+
Sbjct: 25 VVEQFAQAHGINIKTRKMNAKYGSGFINNEKVIVVEPTTFMNDSGIAVKPLMDYFDIPVE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+ + HDDM LP G +R++ G GGHNG+KS++ N G F R+R+G G P
Sbjct: 85 NIAIVHDDMDLPVGKIRVKDKGSAGGHNGIKSIIYNL-GTENFTRVRVGTGHPDKANSVV 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 157
++L +F+ A V L + GLT S
Sbjct: 144 NYVLGRFSKDQVPVFKQAADHAVNALDDWVD-GLTIS 179
>gi|427440724|ref|ZP_18924996.1| aminoacyl-tRNA hydrolase [Pediococcus lolii NGRI 0510Q]
gi|425787431|dbj|GAC45784.1| aminoacyl-tRNA hydrolase [Pediococcus lolii NGRI 0510Q]
Length = 185
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 84/151 (55%), Gaps = 2/151 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++DA A+ G+ +H +A G+ F+ VLL KP TYMN SG + PL YY L L
Sbjct: 25 VVDALAKKYGVDHFKIHHEAMVGEFFLNGEKVLLVKPTTYMNDSGRAVRPLMDYYDLALT 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DDM +P G +RLR G GGHNG+KS++ + G +F RLR+GI P Q
Sbjct: 85 DLIVVYDDMDMPVGKIRLRQKGSAGGHNGIKSLIAHL-GTEKFRRLRVGIEHPAHQ-KVV 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
++L +F + + +Q + L L+
Sbjct: 143 DYVLGRFTKEQKADFEIGVQNAIAALDDWLA 173
>gi|452958433|gb|EME63786.1| peptidyl-tRNA hydrolase [Amycolatopsis decaplanina DSM 44594]
Length = 198
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 92/163 (56%), Gaps = 1/163 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A G A +G + V+LAKP++YMNLSG A +YK+P
Sbjct: 36 VLDELAGRVGGKFKAHKSGAEILEGRLAGQRVVLAKPRSYMNLSGGPVVGAARFYKIPPA 95
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V+V HD++ + G L+++ GG GHNGL+S+ + G +++ R+R G+GRPPG+ DP
Sbjct: 96 GVVVVHDELDVDFGALKMKLGGGDNGHNGLRSITKSL-GTKDYYRVRFGVGRPPGRQDPA 154
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
F+L+ F+ + R+ + + + ++ L+S GL + F+
Sbjct: 155 DFVLKDFSTVERKELAFEIDRCADAVEALISTGLAAAQNTFHA 197
>gi|359462044|ref|ZP_09250607.1| peptidyl-tRNA hydrolase [Acaryochloris sp. CCMEE 5410]
Length = 206
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 95/165 (57%), Gaps = 5/165 (3%)
Query: 2 IDAFAESQGISMNTVH-CKATFGQGFVGDAP-VLLAKPQTYMNLSGESTGPLAAYYKLPL 59
ID A+ IS+ + + +G+G G + V L KP TYMN SG+S + ++KL
Sbjct: 33 IDRLAQHWQISLTSERRFQGEYGEGLGGQSRRVRLLKPHTYMNNSGQSIRAVIDWFKLEP 92
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQ--M 117
VLV +D+M LP G LRLR G GGHNG++S++++ G E RLRIGIG PP +
Sbjct: 93 TSVLVIYDEMALPVGKLRLRLKGSAGGHNGMRSIISHL-GTPEVPRLRIGIGSPPPERGK 151
Query: 118 DPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
D +F+L +F + + L GV+ +++ L KG+ +S FN
Sbjct: 152 DTISFVLGRFAPPENQLLPAVLDLGVDAVEMALKKGIEQSMTLFN 196
>gi|167747444|ref|ZP_02419571.1| hypothetical protein ANACAC_02164 [Anaerostipes caccae DSM 14662]
gi|317471173|ref|ZP_07930544.1| peptidyl-tRNA hydrolase [Anaerostipes sp. 3_2_56FAA]
gi|167652806|gb|EDR96935.1| aminoacyl-tRNA hydrolase [Anaerostipes caccae DSM 14662]
gi|316901388|gb|EFV23331.1| peptidyl-tRNA hydrolase [Anaerostipes sp. 3_2_56FAA]
Length = 190
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 91/161 (56%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A I +++ KA G G++G VLL KPQT+MNLSGES + +YKL +
Sbjct: 26 IDYIAGKNQIEISSKKHKALIGSGYLGGQKVLLVKPQTFMNLSGESLRGVMDFYKLEPSD 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+V DD+ L G LR+R G GGHNG+KS++++ G+ +F R++IG+G P D
Sbjct: 86 FIVIFDDISLDVGQLRIRRKGSAGGHNGIKSIISHL-GSMDFPRIKIGVGEKPKGYDLAD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F+ E D + + +KL++ ++ + +N
Sbjct: 145 YVLGHFSKGEIEIYDDVFPDVDDAVKLMVMDDISGAMNQYN 185
>gi|297200253|ref|ZP_06917650.1| peptidyl-tRNA hydrolase [Streptomyces sviceus ATCC 29083]
gi|197716993|gb|EDY61027.1| peptidyl-tRNA hydrolase [Streptomyces sviceus ATCC 29083]
Length = 200
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 82/132 (62%), Gaps = 2/132 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+LAKP ++MNLSG L +YK+P+ ++ HD++ + GVLRL+ GG GHNGLK
Sbjct: 71 VVLAKPMSFMNLSGGPVNALKDFYKVPVANIVAIHDELDIDYGVLRLKLGGGDNGHNGLK 130
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ F E+ R+R GIGRPPG+M F+L+ F++ R+ +D + + ++ L+
Sbjct: 131 SMTKAF--GAEYHRVRFGIGRPPGRMQVADFVLKDFSSSERKELDYFVDRAADAVEALVI 188
Query: 152 KGLTESARHFNT 163
+GL + +N+
Sbjct: 189 EGLERAQSTYNS 200
>gi|167039250|ref|YP_001662235.1| peptidyl-tRNA hydrolase [Thermoanaerobacter sp. X514]
gi|300913890|ref|ZP_07131207.1| peptidyl-tRNA hydrolase [Thermoanaerobacter sp. X561]
gi|307725425|ref|YP_003905176.1| peptidyl-tRNA hydrolase [Thermoanaerobacter sp. X513]
gi|238687630|sp|B0K466.1|PTH_THEPX RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166853490|gb|ABY91899.1| Aminoacyl-tRNA hydrolase [Thermoanaerobacter sp. X514]
gi|300890575|gb|EFK85720.1| peptidyl-tRNA hydrolase [Thermoanaerobacter sp. X561]
gi|307582486|gb|ADN55885.1| peptidyl-tRNA hydrolase [Thermoanaerobacter sp. X513]
Length = 184
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 92/162 (56%), Gaps = 3/162 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ G+++ + K+ G+G ++L KPQT+MN SGE+ +YK+PL
Sbjct: 25 VIDELAKKLGMNVTKLKFKSLVGEGNFKGEKIILLKPQTFMNSSGEALYDAVNFYKIPLE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V+V +DD L G +R+R G GGHNG+ S++ + EF R+RIGIG+P Q D
Sbjct: 85 NVIVIYDDKDLDLGKIRIRKKGSSGGHNGMNSII-YLLNSEEFPRVRIGIGKP--QKDLV 141
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+ +L KF ++ ID A+ + + + ++ G+ + FN
Sbjct: 142 SHVLGKFEESEKKLIDEAVIKAADAVIDIIENGIEHAMSKFN 183
>gi|46579984|ref|YP_010792.1| peptidyl-tRNA hydrolase [Desulfovibrio vulgaris str. Hildenborough]
gi|120602604|ref|YP_967004.1| peptidyl-tRNA hydrolase [Desulfovibrio vulgaris DP4]
gi|387153574|ref|YP_005702510.1| peptidyl-tRNA hydrolase [Desulfovibrio vulgaris RCH1]
gi|68052972|sp|Q72BR1.1|PTH_DESVH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166199329|sp|A1VDR1.1|PTH_DESVV RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|46449400|gb|AAS96051.1| peptidyl-tRNA hydrolase [Desulfovibrio vulgaris str. Hildenborough]
gi|120562833|gb|ABM28577.1| peptidyl-tRNA hydrolase [Desulfovibrio vulgaris DP4]
gi|311234018|gb|ADP86872.1| peptidyl-tRNA hydrolase [Desulfovibrio vulgaris RCH1]
Length = 201
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 85/138 (61%), Gaps = 1/138 (0%)
Query: 28 GDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGH 87
G AP LLAKPQT+MNLSGE+ +A++Y++ ++V HD++ LP G +R + GG+ GH
Sbjct: 64 GQAPWLLAKPQTFMNLSGEAVLAIASFYRVKPAAMVVAHDELDLPLGRMRFKMGGGNAGH 123
Query: 88 NGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 147
NGLKS+ G +F RLR+GIG+PP + ++L +F+ +D L+ ++ ++
Sbjct: 124 NGLKSITQCL-GTPDFHRLRLGIGKPPAGGETTGWVLGRFSQSDTAMVDAVLEAAIQGIR 182
Query: 148 LLLSKGLTESARHFNTIQ 165
++G + ++ N +
Sbjct: 183 TFATEGDVAATQYINAFR 200
>gi|403508638|ref|YP_006640276.1| peptidyl-tRNA hydrolase [Nocardiopsis alba ATCC BAA-2165]
gi|402803467|gb|AFR10877.1| peptidyl-tRNA hydrolase [Nocardiopsis alba ATCC BAA-2165]
Length = 211
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 99/163 (60%), Gaps = 1/163 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++DA A +G A + + A V+LAKP+T+MN+SG LA +YK+P+
Sbjct: 48 VVDALAADKGERWKAHKANADVVETRIDGASVVLAKPRTFMNVSGGPIAGLAKFYKVPME 107
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
R++V HD+M + G L+L+ GG GGHNGLKS + G ++ R+R G+GRPPG+MDP
Sbjct: 108 RIVVVHDEMDIDYGALKLKRGGGSGGHNGLKSTTASLSGP-DYLRVRFGVGRPPGRMDPA 166
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
+L+ F++ R ++ ++ + ++ +L++GL + F+T
Sbjct: 167 VHVLRDFSSTERPELELNVERAADAVRTILTEGLGRAQNVFHT 209
>gi|383827088|ref|ZP_09982203.1| peptidyl-tRNA hydrolase [Mycobacterium xenopi RIVM700367]
gi|383331666|gb|EID10162.1| peptidyl-tRNA hydrolase [Mycobacterium xenopi RIVM700367]
Length = 191
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/137 (45%), Positives = 87/137 (63%), Gaps = 3/137 (2%)
Query: 18 CKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLR 77
C+ GQ +G V+LAKP++YMN SG PLA +Y +P ++V HDD+ L G +R
Sbjct: 48 CEIVTGQ--LGGRSVVLAKPRSYMNESGRQVAPLAKFYSVPPADIIVIHDDLDLDFGRIR 105
Query: 78 LRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDT 137
L+ GG GGHNGL+SV G ++F R+RIGIGRPPG+ DP AF+L+ F A R + T
Sbjct: 106 LKLGGGEGGHNGLRSVAAAL-GTKDFQRVRIGIGRPPGRKDPAAFVLENFTAAERAEVPT 164
Query: 138 ALQEGVEVLKLLLSKGL 154
++ + +LL+ GL
Sbjct: 165 ICEQAADATELLIELGL 181
>gi|16331675|ref|NP_442403.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 6803]
gi|383323417|ref|YP_005384271.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383326586|ref|YP_005387440.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383492470|ref|YP_005410147.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384437738|ref|YP_005652463.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 6803]
gi|451815827|ref|YP_007452279.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 6803]
gi|2499989|sp|Q59989.1|PTH_SYNY3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|1001232|dbj|BAA10473.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 6803]
gi|339274771|dbj|BAK51258.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 6803]
gi|359272737|dbj|BAL30256.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359275907|dbj|BAL33425.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359279077|dbj|BAL36594.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407960691|dbj|BAM53931.1| peptidyl-tRNA hydrolase [Bacillus subtilis BEST7613]
gi|451781796|gb|AGF52765.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 6803]
Length = 194
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 91/163 (55%), Gaps = 2/163 (1%)
Query: 1 MIDAFAESQGISM-NTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPL 59
++DA A + S + + FG+G + L KP+TYMN SG++ + +YKL
Sbjct: 27 VVDALAITWQCSWYDHKRFQGWFGEGLMAGQKTCLLKPRTYMNRSGQAVRAVVDWYKLDP 86
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
VLV +DDM LP G LRLR G GGHNG+KS++++ G ++F RLR+GIG+ G D
Sbjct: 87 QSVLVVYDDMDLPLGRLRLRQTGSAGGHNGMKSLISHL-GTQDFPRLRLGIGKSDGSKDT 145
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
A +L KF+ ++ +L E + L G+ ++ FN
Sbjct: 146 IAHVLGKFSPSELPIVEKSLDLATEAIAHSLHHGIAKTMSLFN 188
>gi|291286017|ref|YP_003502833.1| peptidyl-tRNA hydrolase [Denitrovibrio acetiphilus DSM 12809]
gi|290883177|gb|ADD66877.1| peptidyl-tRNA hydrolase [Denitrovibrio acetiphilus DSM 12809]
Length = 197
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 89/152 (58%), Gaps = 10/152 (6%)
Query: 20 ATFGQGFVGDAPVL--------LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGL 71
A+F +GF G+ + KP TYMNLSGES PLAAYYK+P+ ++ HDD+ +
Sbjct: 34 ASFSKGFKGEYAEFFMDGGKHYILKPYTYMNLSGESVQPLAAYYKIPVEDIIAVHDDLDI 93
Query: 72 PCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIA 131
G L+L+ G GGH G++S M G+++F RL++GIG+ G+ D +L KF+
Sbjct: 94 EFGRLKLKKGGNDGGHKGIRS-MAQMLGDKDFIRLKMGIGK-DGRRDTIGHVLGKFSPQE 151
Query: 132 RERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
E++D + GV+ + + +GL + FNT
Sbjct: 152 SEKLDEFIDIGVKAVVCCIKEGLRPAMNVFNT 183
>gi|358067113|ref|ZP_09153597.1| peptidyl-tRNA hydrolase [Johnsonella ignava ATCC 51276]
gi|356694755|gb|EHI56412.1| peptidyl-tRNA hydrolase [Johnsonella ignava ATCC 51276]
Length = 195
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 91/165 (55%), Gaps = 5/165 (3%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A I +N V K+ G GF+G+ VLL KPQTYMN SGE+ YYKL +
Sbjct: 26 IDRLAFKYEIPLNEVKHKSICGSGFMGNERVLLMKPQTYMNRSGEAIAKALHYYKLKPSD 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V DD+ L G +R+R G GGHNG++S++ GN FAR++IGIG+ G+
Sbjct: 86 LIVVFDDVNLMPGQIRVRLRGSSGGHNGMRSIIYCISGN-VFARVKIGIGKEDGKT-LSG 143
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 166
++L KF +D A V ++LL+S E+ R N K
Sbjct: 144 YVLGKFTRAESVLLDEAYSNAVSAIELLIS---GEADRAMNVFNK 185
>gi|339443834|ref|YP_004709838.1| peptidyl-tRNA hydrolase [Eggerthella sp. YY7918]
gi|338903586|dbj|BAK43437.1| peptidyl-tRNA hydrolase [Eggerthella sp. YY7918]
Length = 185
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 90/161 (55%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+DA A G C A +G D ++LAKPQ++MN SG L Y + +
Sbjct: 26 VDAIAAEVGARYWKTECGALTAKGVFRDHDLVLAKPQSFMNTSGGPVKQLMNAYGIDADH 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+++ HD++ + G +R++ GGH GHNGL+S+ + G R++ R+RIGIGRPPG+M
Sbjct: 86 LIIIHDELDIDPGTIRVKFGGGHAGHNGLRSICDKL-GTRDWFRVRIGIGRPPGRMPVVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L + A + A+ G + L+++GL ++ + FN
Sbjct: 145 WVLSRPRKEAADDFTFAVDRGAQAALSLVNEGLEKTQQAFN 185
>gi|227522402|ref|ZP_03952451.1| peptidyl-tRNA hydrolase [Lactobacillus hilgardii ATCC 8290]
gi|227090460|gb|EEI25772.1| peptidyl-tRNA hydrolase [Lactobacillus hilgardii ATCC 8290]
Length = 189
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 82/151 (54%), Gaps = 1/151 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+++ FA+ GIS+ T A G FV VL+ +P T+MN SG + PL +Y+++
Sbjct: 28 VVEEFAKKYGISIKTRKMNAKMGSAFVNGQKVLVVEPTTFMNDSGIAVKPLMSYFEIENK 87
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V+V HDDM LP G +R++ G GGHNG+KS++NN G F+R+R+GI P
Sbjct: 88 DVIVVHDDMDLPIGKIRIKDKGSAGGHNGIKSLINNL-GTEHFSRIRVGIAHPDKNNTVV 146
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
++L +F+ A V L+ L
Sbjct: 147 NYVLGRFSKSQLPEFKIATDNAVNALEDWLD 177
>gi|428210015|ref|YP_007094368.1| peptidyl-tRNA hydrolase [Chroococcidiopsis thermalis PCC 7203]
gi|428011936|gb|AFY90499.1| peptidyl-tRNA hydrolase [Chroococcidiopsis thermalis PCC 7203]
Length = 225
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 94/167 (56%), Gaps = 7/167 (4%)
Query: 2 IDAFAESQGISM-NTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+DA A + I + + + FG+G + L KP TYMN SG++ + +YKLP
Sbjct: 43 VDAIARAWQIPLADNRKFQGIFGEGRSNAGKIRLLKPLTYMNNSGQAIRAVTDWYKLPPE 102
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
VL +DDM LP G +RLR +G GGHNG+KS + + G + F RLRIGIGRP G +
Sbjct: 103 SVLAIYDDMDLPLGKIRLRLSGSAGGHNGMKSAIAHL-GTQNFPRLRIGIGRPQGNNTKE 161
Query: 121 -----AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+++L +F++ + LQ +E ++L L +G+ ++ +N
Sbjct: 162 DASTISYVLGRFSSDQTPLVAEVLQMALEAVELSLKQGVAQAMNRYN 208
>gi|168334868|ref|ZP_02692990.1| peptidyl-tRNA hydrolase [Epulopiscium sp. 'N.t. morphotype B']
Length = 187
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 87/163 (53%), Gaps = 1/163 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D A GI+MN + G+G + +LL KP T+MNLSGES +YKL
Sbjct: 26 VDYLAHYYGIAMNKNRFRGISGEGIIEGEKILLLKPLTFMNLSGESLIECMNFYKLTAEE 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+LV +DD GV++++ G GGHNG+K+++ + + + F R RIGIGRPP
Sbjct: 86 ILVIYDDTAFETGVIKMKRTGSAGGHNGIKNIIEHIK-TQNFPRARIGIGRPPEGYLLVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTI 164
++L KF + E+I ++ + + ++K + + N I
Sbjct: 145 YVLSKFTDMEIEKIKDSMPSFKDAVTTFVTKDIEAAMNKLNAI 187
>gi|408678666|ref|YP_006878493.1| Peptidyl-tRNA hydrolase [Streptomyces venezuelae ATCC 10712]
gi|328882995|emb|CCA56234.1| Peptidyl-tRNA hydrolase [Streptomyces venezuelae ATCC 10712]
Length = 198
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 81/132 (61%), Gaps = 2/132 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+LAKP +YMNLSG L +YK+P V+ HD++ + GVLRL+ GG GHNGLK
Sbjct: 69 VILAKPMSYMNLSGGPVTALRDFYKVPTANVVAVHDELDIDYGVLRLKIGGGDNGHNGLK 128
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ E+ R+R GIGRPPG+M F+L+ F++ R+ +D + + ++ L++
Sbjct: 129 SMTKAM--GAEYHRVRCGIGRPPGRMQVADFVLKDFSSTERKDLDWFVDRAADSVECLVA 186
Query: 152 KGLTESARHFNT 163
+GL + +N+
Sbjct: 187 EGLERAQSAYNS 198
>gi|418071052|ref|ZP_12708326.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus R0011]
gi|423078395|ref|ZP_17067078.1| aminoacyl-tRNA hydrolase [Lactobacillus rhamnosus ATCC 21052]
gi|357538546|gb|EHJ22566.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus R0011]
gi|357551252|gb|EHJ33046.1| aminoacyl-tRNA hydrolase [Lactobacillus rhamnosus ATCC 21052]
Length = 185
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 84/151 (55%), Gaps = 2/151 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A+ G+++N + A V D V L KPQTYMN SG + L YY++ L+
Sbjct: 25 VVDGLAQRMGLTLNKLEFDAATATARVDDEKVFLVKPQTYMNASGRAVRQLMMYYQIRLD 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV HDDM L G LRLR G GGHNG+K +++ G+ EF RL+IGI P Q
Sbjct: 85 EILVVHDDMDLTLGKLRLRQRGSAGGHNGIKDIISA-TGSDEFYRLKIGIQHPQRQR-VV 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
++L F + ID A+ + + L+ L+
Sbjct: 143 DWVLTPFAKTDQPVIDAAITKADDALEDWLN 173
>gi|338733704|ref|YP_004672177.1| peptidyl-tRNA hydrolase [Simkania negevensis Z]
gi|336483087|emb|CCB89686.1| peptidyl-tRNA hydrolase [Simkania negevensis Z]
Length = 190
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 95/163 (58%), Gaps = 6/163 (3%)
Query: 1 MIDAFAESQGISMNT-VHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPL 59
++ AFAE QG + + + G V ++ V+L P+TYMNLSG+S + YYK+ L
Sbjct: 29 VVKAFAEKQGWTFKADSNLQGEIASGTVSESKVILLLPKTYMNLSGQSVRKVLDYYKIDL 88
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIG-RPPGQMD 118
LV DD+ L G LR R G GGHNGLK + ++ G +E+ RLR+GIG R G ++
Sbjct: 89 THFLVVADDIALDFGTLRFREKGSSGGHNGLKDIESHL-GTQEYQRLRLGIGDRDHGYLE 147
Query: 119 PKAFLLQKFNAIARERIDTALQEGVEVL-KLLLSKGLTESARH 160
++L F+A ++ + ++EGV+ L K L+ + +SA+
Sbjct: 148 D--YVLSPFSAEEQKDLPKVIEEGVDFLDKWLMKETYEKSAKE 188
>gi|339626511|ref|YP_004718154.1| peptidyl-tRNA hydrolase [Sulfobacillus acidophilus TPY]
gi|379005968|ref|YP_005255419.1| peptidyl-tRNA hydrolase [Sulfobacillus acidophilus DSM 10332]
gi|339284300|gb|AEJ38411.1| peptidyl-tRNA hydrolase [Sulfobacillus acidophilus TPY]
gi|361052230|gb|AEW03747.1| Peptidyl-tRNA hydrolase [Sulfobacillus acidophilus DSM 10332]
Length = 182
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 90/163 (55%), Gaps = 8/163 (4%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPV-LLAKPQTYMNLSGESTGPLAAYYKLPL 59
++DA+A +G+ G++ D+ L KP T+MNLSG++ GP Y+L
Sbjct: 26 VLDAYARHRGLRFRLGRY------GYLADSDQGWLMKPMTFMNLSGDAVGPFVRRYRLTP 79
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
++VLV HDD+ LP G +R+R +G GGHNG+KS++ G F R+R+GI RPP M
Sbjct: 80 DQVLVVHDDLDLPLGRIRIRAHGSSGGHNGIKSIIQAL-GTDRFPRMRLGISRPPASMPV 138
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F+A R + + VE L + +GL + +N
Sbjct: 139 IDWVLAPFSADERRVLQDTIARAVEALDGIGQEGLEWAMSRYN 181
>gi|434388107|ref|YP_007098718.1| peptidyl-tRNA hydrolase [Chamaesiphon minutus PCC 6605]
gi|428019097|gb|AFY95191.1| peptidyl-tRNA hydrolase [Chamaesiphon minutus PCC 6605]
Length = 205
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 100/164 (60%), Gaps = 3/164 (1%)
Query: 2 IDAFAESQGISM-NTVHCKATFGQGFVG-DAPVLLAKPQTYMNLSGESTGPLAAYYKLPL 59
ID+ A+ IS+ + + +G+GF +A + + KPQT+MNLSG+S ++KL
Sbjct: 33 IDSLAKRWQISLTDRKQFQGIYGEGFGSHNAKIRMLKPQTFMNLSGQSVRATLDWFKLSP 92
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
VLV +DD+ LP G +RLR +G GGHNG+KS++++ G ++F R+RIGIG G+ D
Sbjct: 93 ESVLVIYDDLDLPLGKIRLRLSGSAGGHNGMKSIISHL-GTQKFPRVRIGIGTSVGEKDT 151
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
+ +L KF+AI + + + +++ L +G+ ++ +N+
Sbjct: 152 ISHVLGKFSAIETPIVSEVIYLVNDAIEMSLKQGVEKAMSLYNS 195
>gi|346307074|ref|ZP_08849219.1| peptidyl-tRNA hydrolase [Dorea formicigenerans 4_6_53AFAA]
gi|345907020|gb|EGX76738.1| peptidyl-tRNA hydrolase [Dorea formicigenerans 4_6_53AFAA]
Length = 194
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 90/163 (55%), Gaps = 2/163 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PL 59
+ID AE I+++ +A G+G + VLL KPQTYMNLSGES L Y+K+ P
Sbjct: 25 VIDKIAEKYNIAVDAKKGRAYVGKGIIEGQKVLLVKPQTYMNLSGESIRELVDYFKVDPK 84
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
+LV +DD+ L G +R+R G GGHNG+K+++ G F R+++G+G P D
Sbjct: 85 EELLVIYDDISLNPGQIRIRKKGSAGGHNGIKNIIAQL-GTDTFQRIKVGVGEKPKGYDL 143
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
A++L F+ E ++ ++ + + +L + + +N
Sbjct: 144 AAYVLGHFHGEDLELMEEGYEKAISATEEILKGEIDAAMNEYN 186
>gi|118473398|ref|YP_889671.1| peptidyl-tRNA hydrolase [Mycobacterium smegmatis str. MC2 155]
gi|399989670|ref|YP_006570020.1| peptidyl-tRNA hydrolase [Mycobacterium smegmatis str. MC2 155]
gi|166229422|sp|A0R3D3.1|PTH_MYCS2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|399124831|pdb|2LGJ|A Chain A, Solution Structure Of Mspth
gi|118174685|gb|ABK75581.1| peptidyl-tRNA hydrolase [Mycobacterium smegmatis str. MC2 155]
gi|399234232|gb|AFP41725.1| Peptidyl-tRNA hydrolase [Mycobacterium smegmatis str. MC2 155]
Length = 191
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 98/154 (63%), Gaps = 6/154 (3%)
Query: 16 VHCK--ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPC 73
VH K A G + V+LAKP+ YMN SG GPLA +Y +P +++V HD++ +
Sbjct: 42 VHKKSGAEVVTGRLAGTSVVLAKPRCYMNESGRQVGPLAKFYSVPPQQIVVIHDELDIDF 101
Query: 74 GVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARE 133
G +RL+ GG GGHNGL+SV + G + F R+RIG+GRPPG+ DP AF+L+ F A R
Sbjct: 102 GRIRLKLGGGEGGHNGLRSVASAL-GTKNFHRVRIGVGRPPGRKDPAAFVLENFTAAERA 160
Query: 134 RIDTALQEGVEVLKLLLSKGLTESARHFNTIQKY 167
+ T +++ + +LL+++GL E A+ NT+ +
Sbjct: 161 EVPTIVEQAADATELLIAQGL-EPAQ--NTVHAW 191
>gi|373471303|ref|ZP_09562360.1| aminoacyl-tRNA hydrolase [Lachnospiraceae bacterium oral taxon 082
str. F0431]
gi|371760469|gb|EHO49153.1| aminoacyl-tRNA hydrolase [Lachnospiraceae bacterium oral taxon 082
str. F0431]
Length = 202
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 95/168 (56%), Gaps = 2/168 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+++ A G + K F + +G+ +L +PQTYMN SGES Y+K+
Sbjct: 37 VVEKLAYELGEDITERKYKGLFAKARIGNEKAILLEPQTYMNNSGESVRAFMDYFKIEAK 96
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V+V +DD+ L G LR+R G GGHNG+KS++ + G +F R+++G+G P +MD
Sbjct: 97 DVIVVYDDINLEPGNLRIRLKGSAGGHNGIKSLIAHM-GTSDFPRVKMGVGEKPARMDLA 155
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYK 168
+L FNA ++++D A +E +KL++ G ++A + ++K K
Sbjct: 156 DHVLGHFNAEDKKKLDEAASHAIEAIKLMVD-GQYDTAMNKYNVKKTK 202
>gi|308066874|ref|YP_003868479.1| peptidyl-tRNA hydrolase [Paenibacillus polymyxa E681]
gi|305856153|gb|ADM67941.1| Peptidyl-tRNA hydrolase (PTH) [Paenibacillus polymyxa E681]
Length = 186
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 85/161 (52%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+DA A I +N CKA G+G +G +L KP TYMNLSGES YYK +
Sbjct: 26 LDALASRHNIQINQSKCKALIGEGHIGGVKTVLIKPMTYMNLSGESLRAYMDYYKADMED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DD+ G +RLR+ G GGHNG+KS++ + G + F R+R+GI RP
Sbjct: 86 LVVVYDDLDTEVGKIRLRYQGSAGGHNGIKSIIQH-TGTQSFNRIRMGISRPEPGHAIVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F ++ + +++ L+ LS + FN
Sbjct: 145 YVLGTFPKKEKDLLAGMIEDTCNALEYSLSHPFERTMAEFN 185
>gi|418069810|ref|ZP_12707087.1| peptidyl-tRNA hydrolase [Pediococcus acidilactici MA18/5M]
gi|357536341|gb|EHJ20372.1| peptidyl-tRNA hydrolase [Pediococcus acidilactici MA18/5M]
Length = 185
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 83/151 (54%), Gaps = 2/151 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++DA A+ G+ +H +A G+ F VLL KP TYMN SG + PL YY L L
Sbjct: 25 VVDALAKKYGVDHFKIHHEAMVGEFFSNGEKVLLVKPTTYMNDSGRAVRPLMDYYDLALT 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DDM +P G +RLR G GGHNG+KS++ + G +F RLR+GI P Q
Sbjct: 85 DLIVVYDDMDMPVGKIRLRQKGSAGGHNGIKSLIAHL-GTEKFRRLRVGIEHPAHQ-KVV 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
++L +F + + +Q + L L+
Sbjct: 143 DYVLGRFTKEQKADFEIGVQNAIAALDDWLA 173
>gi|384208211|ref|YP_005593931.1| peptidyl-tRNA hydrolase [Brachyspira intermedia PWS/A]
gi|343385861|gb|AEM21351.1| putative peptidyl-tRNA hydrolase [Brachyspira intermedia PWS/A]
Length = 298
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 90/151 (59%), Gaps = 2/151 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID AE+ I+ + K+ + + D +L KPQT+MNLSGES ++ ++ +
Sbjct: 27 LIDKIAENFNINFDNNKKKSLYARAKEKDIEYILLKPQTFMNLSGESAIFISKFFNIKPE 86
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DDM +P G +++ G GGHNG+KS++++ + + +F R+RIGIGRP
Sbjct: 87 DIIVIYDDMDIPFGTFKIKKGGSSGGHNGIKSLISHLQSD-DFTRIRIGIGRPSAGKKVN 145
Query: 121 AFLLQKFNAIARERIDTAL-QEGVEVLKLLL 150
++L F+ RE +DT + + ++ +K+ L
Sbjct: 146 DYVLSNFSKKEREDLDTVIANDIIDAVKISL 176
>gi|229816292|ref|ZP_04446601.1| hypothetical protein COLINT_03344 [Collinsella intestinalis DSM
13280]
gi|229808143|gb|EEP43936.1| hypothetical protein COLINT_03344 [Collinsella intestinalis DSM
13280]
Length = 209
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 91/168 (54%), Gaps = 8/168 (4%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAP-------VLLAKPQTYMNLSGESTGPLAAY 54
ID AE G+S A V DA V+L KPQ+YMN SG L A
Sbjct: 34 IDVLAEKAGVSYWKNQAGAEVAVINVNDAEAEGGKREVVLVKPQSYMNTSGGPISKLCAQ 93
Query: 55 YKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPP 114
YK+ +LV HD++ +P G +R++ GGH GHNGL+S+++ G+R+F+R+R GIG PP
Sbjct: 94 YKVKPEELLVIHDELDIPAGDVRVKVGGGHAGHNGLRSIIDKL-GSRDFSRIRAGIGNPP 152
Query: 115 GQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
G+M F+L++ + E + + E L +++G+ + H N
Sbjct: 153 GRMPVADFVLKQLRSREAEDFEVMTHQAAEAAALAVTRGVVFARDHVN 200
>gi|318061240|ref|ZP_07979961.1| peptidyl-tRNA hydrolase [Streptomyces sp. SA3_actG]
gi|318075755|ref|ZP_07983087.1| peptidyl-tRNA hydrolase [Streptomyces sp. SA3_actF]
Length = 202
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 82/132 (62%), Gaps = 2/132 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V++AKP +YMNLSG L +YK+PL RV+ HD++ + GVLRL+ GG GHNGLK
Sbjct: 73 VVVAKPLSYMNLSGGPVTALRDFYKVPLERVVAVHDELDIDYGVLRLKLGGGDNGHNGLK 132
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ + R+R GIGRPPG+M F+L+ F++ R+ +D + + ++ L++
Sbjct: 133 SMTKAM--GPAYHRVRFGIGRPPGRMQVADFVLKDFSSSERKELDYFVDRAADAVEALVT 190
Query: 152 KGLTESARHFNT 163
+GL + +N+
Sbjct: 191 QGLERAQGSYNS 202
>gi|342215333|ref|ZP_08707980.1| aminoacyl-tRNA hydrolase [Peptoniphilus sp. oral taxon 375 str.
F0436]
gi|341586223|gb|EGS29623.1| aminoacyl-tRNA hydrolase [Peptoniphilus sp. oral taxon 375 str.
F0436]
Length = 193
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 88/162 (54%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID +++ I +N CK +GQG + L KPQTYMN SGES Y+ +P+
Sbjct: 25 VIDLLSQTLSIPVNKAKCKGLYGQGTRNGEKIFLLKPQTYMNNSGESVQEFIRYFNIPIQ 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
VLV DD+ + ++++ G G HNGLKS++ G+++F RL+IG+G+ + +
Sbjct: 85 DVLVLVDDIDIDFTEIKIKAKGSAGTHNGLKSII-AMTGSQDFPRLKIGVGKKHPEENLA 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
F+L +F +E ++ L E +L G++ HFN
Sbjct: 144 NFVLGRFPRDQQEEMEQCLDRAAEAAIAILDHGVSYGMNHFN 185
>gi|339634732|ref|YP_004726373.1| peptidyl-tRNA hydrolase [Weissella koreensis KACC 15510]
gi|338854528|gb|AEJ23694.1| peptidyl-tRNA hydrolase [Weissella koreensis KACC 15510]
Length = 188
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 80/141 (56%), Gaps = 3/141 (2%)
Query: 2 IDAFAESQGISMNTVHCKATF-GQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
IDAFA+ GI+ F +G++G VLL KP TYMNLSGE+ PL YY L +
Sbjct: 26 IDAFAQELGINFKQDGPHHAFVAEGWIGTDKVLLVKPTTYMNLSGEAVAPLMKYYNLVIE 85
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+L+ DDM + G LRLR G GGHNG+KS+++ G + F RL+ GI P +
Sbjct: 86 DLLIIQDDMDMELGRLRLRTKGSAGGHNGIKSIISQL-GTQNFNRLKFGIAHPKHEKQAV 144
Query: 121 A-FLLQKFNAIARERIDTALQ 140
F+L KFN +D +++
Sbjct: 145 INFVLGKFNKDDAITVDQSIE 165
>gi|119508860|ref|ZP_01628012.1| peptidyl-tRNA hydrolase [Nodularia spumigena CCY9414]
gi|119466389|gb|EAW47274.1| peptidyl-tRNA hydrolase [Nodularia spumigena CCY9414]
Length = 209
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 95/166 (57%), Gaps = 5/166 (3%)
Query: 2 IDAFAESQGISM-NTVHCKATFGQGFV-GDAPVLLAKPQTYMNLSGESTGPLAAYYKLPL 59
IDA + S I + + +G+G G + L KP TYMN SG+S + ++YKLP
Sbjct: 38 IDALSRSWHIPLGENRKFQGEYGEGIAPGSRKIRLLKPLTYMNRSGQSIQAVTSWYKLPP 97
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
VLV +DDM LP G RLR +G GGHNG+KS +++ + F RLRIGIG+P +
Sbjct: 98 ESVLVIYDDMDLPLGKTRLRLSGSAGGHNGMKSTISHL-NTQNFPRLRIGIGKPNDSDNS 156
Query: 120 KAF--LLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++ +L KF+A + I LQ VE ++L L +G+ ++ N+
Sbjct: 157 ESISHVLGKFSAAETQLISVLLQFVVECVELSLKQGVEKAMNRCNS 202
>gi|365903692|ref|ZP_09441515.1| peptidyl-tRNA hydrolase [Lactobacillus malefermentans KCTC 3548]
Length = 185
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 83/151 (54%), Gaps = 2/151 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D+FAE ++ T +A GF+ VLL KP T+MN SG + PL +YKL
Sbjct: 25 VVDSFAEKNNLTFTTRKMEAKLASGFINGEKVLLVKPTTFMNESGRAVRPLMDFYKLTPE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V HDDM LP G +RLR G GGHNG++S++++ G F R+R+G+ P +
Sbjct: 85 DIIVVHDDMDLPLGKIRLRQKGSAGGHNGIRSLISHV-GTENFKRIRVGV-EHPAKSTVV 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
++L KF + D E + L+ +S
Sbjct: 143 DYVLGKFTKEQQPLFDEGKDEAIGALEDWIS 173
>gi|333921147|ref|YP_004494728.1| peptidyl-tRNA hydrolase [Amycolicicoccus subflavus DQS3-9A1]
gi|333483368|gb|AEF41928.1| Peptidyl-tRNA hydrolase [Amycolicicoccus subflavus DQS3-9A1]
Length = 189
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 74/113 (65%), Gaps = 1/113 (0%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+LAKP TYMNLSG A ++ +P V+ HDD+ L GV+RL+ GG GGHNGL+
Sbjct: 58 VVLAKPHTYMNLSGGPISATAKFFSVPPENVIAVHDDLDLDFGVVRLKRAGGEGGHNGLR 117
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVE 144
S+ + R++ R+R+G+GRPPGQM +++L+ F+A R+ + ++E +
Sbjct: 118 SLTAHLH-TRDYLRVRLGVGRPPGQMAAASYVLKPFSATERKELGVIVEEAAD 169
>gi|223936332|ref|ZP_03628244.1| Aminoacyl-tRNA hydrolase [bacterium Ellin514]
gi|223894850|gb|EEF61299.1| Aminoacyl-tRNA hydrolase [bacterium Ellin514]
Length = 197
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 83/132 (62%), Gaps = 2/132 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
+LL KPQT+MN SGE+ G +A++Y+LPL +++V DD LP G +R+R NG GGH+GL+
Sbjct: 60 ILLCKPQTFMNASGETVGAMASFYRLPLPQLVVAVDDADLPFGQIRMRANGSSGGHHGLE 119
Query: 92 SVMNNFRGNREFARLRIGIGRPP-GQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 150
S+ + G REFARLR+GIGR + + ++L F+ + +D L + ++ L
Sbjct: 120 SIEKHL-GTREFARLRLGIGRAADDRREITDYVLAPFSGAEAKTVDKVLNTASDQIECWL 178
Query: 151 SKGLTESARHFN 162
G+ ++ FN
Sbjct: 179 DGGIQKAMSQFN 190
>gi|317490360|ref|ZP_07948844.1| peptidyl-tRNA hydrolase [Eggerthella sp. 1_3_56FAA]
gi|325833603|ref|ZP_08166052.1| aminoacyl-tRNA hydrolase [Eggerthella sp. HGA1]
gi|316910495|gb|EFV32120.1| peptidyl-tRNA hydrolase [Eggerthella sp. 1_3_56FAA]
gi|325485527|gb|EGC87996.1| aminoacyl-tRNA hydrolase [Eggerthella sp. HGA1]
Length = 185
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 86/161 (53%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D AE G C A +G D ++LAKPQ+YMN SG L Y +
Sbjct: 26 VDLIAEEVGARYWKTECGALTTKGVYRDHDLVLAKPQSYMNTSGGPVKQLMNAYGVDAEH 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V HD++ + G +R++ GGH GHNGL+S+ + G R++ R+R+GIGRPPG+M
Sbjct: 86 LIVVHDELDIDPGTVRVKFGGGHAGHNGLRSICDKL-GTRDWHRVRVGIGRPPGRMPVVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L K A + A G + L+ GL ++ + FN
Sbjct: 145 WVLSKPKKDAADDFAQATDRGAQAALSLVQVGLEKTQQAFN 185
>gi|304385534|ref|ZP_07367878.1| aminoacyl-tRNA hydrolase [Pediococcus acidilactici DSM 20284]
gi|304328038|gb|EFL95260.1| aminoacyl-tRNA hydrolase [Pediococcus acidilactici DSM 20284]
Length = 185
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 83/151 (54%), Gaps = 2/151 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++DA A+ G+ +H +A G+ F VLL KP TYMN SG + PL YY L L
Sbjct: 25 VVDALAKKYGVDHFKIHHEAMVGEFFSNGEKVLLVKPTTYMNDSGRAVRPLMDYYDLALT 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DDM +P G +RLR G GGHNG+KS++ + G +F RLR+GI P Q
Sbjct: 85 DLIVVYDDMDMPVGKIRLRQKGSAGGHNGIKSLIAHL-GTEKFRRLRVGIEHPAHQ-KVV 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
++L +F + + +Q + L L+
Sbjct: 143 DYVLGRFTKEQKADFEIGVQNAIAALDDWLA 173
>gi|218248401|ref|YP_002373772.1| aminoacyl-tRNA hydrolase [Cyanothece sp. PCC 8801]
gi|257061467|ref|YP_003139355.1| peptidyl-tRNA hydrolase [Cyanothece sp. PCC 8802]
gi|218168879|gb|ACK67616.1| Aminoacyl-tRNA hydrolase [Cyanothece sp. PCC 8801]
gi|256591633|gb|ACV02520.1| peptidyl-tRNA hydrolase [Cyanothece sp. PCC 8802]
Length = 202
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 98/164 (59%), Gaps = 3/164 (1%)
Query: 1 MIDAFAESQGISM-NTVHCKATFGQGFV-GDAPVLLAKPQTYMNLSGESTGPLAAYYKLP 58
+IDA AE+ +S+ + F +G G+ + L KP TYMN SG+S ++ +YKL
Sbjct: 34 VIDALAETWQLSLKENRRFQGLFAEGMARGNHKIYLLKPLTYMNRSGQSVRAVSDWYKLY 93
Query: 59 LNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMD 118
N +LV +DDM LP G +R+R G GGHNG+KS++++ G+++F RLR+GIG+ +
Sbjct: 94 PNSMLVIYDDMDLPVGRMRMRLEGSAGGHNGMKSIISHV-GSQDFPRLRLGIGKSNQSKE 152
Query: 119 PKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+ +L KF +E I L V+ +++ L +G+ ++ +N
Sbjct: 153 TISHVLGKFAPQEQEIIAKVLSLAVDAVEMSLKEGVAKAMSLYN 196
>gi|401564385|ref|ZP_10805280.1| aminoacyl-tRNA hydrolase [Selenomonas sp. FOBRC6]
gi|400188883|gb|EJO23017.1| aminoacyl-tRNA hydrolase [Selenomonas sp. FOBRC6]
Length = 209
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 92/170 (54%), Gaps = 9/170 (5%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGF----VGDAPVLLAKPQTYMNLSGESTGPLAAYYK 56
++DA A+ +N K F +G V L KP TYMN SGE+ GP+ +YYK
Sbjct: 25 LVDALADR----LNAPAWKEDFFSAVTEVRIGGEKVFLVKPLTYMNNSGEAVGPMLSYYK 80
Query: 57 LPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQ 116
+ + + V HDDM +P G +R+R G GGHNG+KS++ + G FAR+RIG+GRPP
Sbjct: 81 MTADDLTVVHDDMDIPAGTVRIRKKGSSGGHNGIKSIIAHV-GGENFARVRIGVGRPPAG 139
Query: 117 MDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 166
+L F A +I A+ + ++ +++ G+ + +N +K
Sbjct: 140 WTVINHVLAPFLAEDAPKIREAIGYLLPAVECIVTDGVELAMNRYNPHKK 189
>gi|441161197|ref|ZP_20967906.1| peptidyl-tRNA hydrolase [Streptomyces rimosus subsp. rimosus ATCC
10970]
gi|440616781|gb|ELQ79907.1| peptidyl-tRNA hydrolase [Streptomyces rimosus subsp. rimosus ATCC
10970]
Length = 197
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 79/132 (59%), Gaps = 2/132 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V++AKP TYMNLSG L +YK+P+ ++ HD++ + G LRL+ GG GHNGLK
Sbjct: 68 VVIAKPMTYMNLSGGPVTALRDFYKVPVGNIVAVHDELDIDYGALRLKLGGGDNGHNGLK 127
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ + E+ R+R GIGRPPG+M F+L+ F+ R+ +D + + ++ L+
Sbjct: 128 SITKSL--GAEYHRVRFGIGRPPGRMQVADFVLKDFSGAERKELDYFVDRAADAVEALIV 185
Query: 152 KGLTESARHFNT 163
GL + +N+
Sbjct: 186 DGLERAQSAYNS 197
>gi|386385802|ref|ZP_10071045.1| peptidyl-tRNA hydrolase [Streptomyces tsukubaensis NRRL18488]
gi|385666740|gb|EIF90240.1| peptidyl-tRNA hydrolase [Streptomyces tsukubaensis NRRL18488]
Length = 203
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 81/132 (61%), Gaps = 2/132 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+LAKP +YMNLSG L +YK+P+ ++ HD++ + GVLRL+ GG GHNGLK
Sbjct: 74 VVLAKPMSYMNLSGGPVTALRDFYKIPVANIVAVHDELDIDYGVLRLKIGGGDNGHNGLK 133
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ + E+ R+R GIGRPPG+M F+L+ F+ R+ +D + + ++ L+
Sbjct: 134 SITKSL--GPEYHRVRFGIGRPPGRMPVADFVLKDFSGAERKELDYFVDRAADAVEALVI 191
Query: 152 KGLTESARHFNT 163
+GL + +N+
Sbjct: 192 EGLERAQSTYNS 203
>gi|302390886|ref|YP_003826706.1| peptidyl-tRNA hydrolase [Acetohalobium arabaticum DSM 5501]
gi|302202963|gb|ADL11641.1| peptidyl-tRNA hydrolase [Acetohalobium arabaticum DSM 5501]
Length = 185
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 101/162 (62%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID FA+ + I + +A G + V+LAKPQTYMN SG + G L +Y +
Sbjct: 25 VIDNFADKKQIKIEKEEQEALTGSLYFKGEKVILAKPQTYMNNSGRAVGKLVNWYDIAPE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V++ +DD+ L G LR++ +GGHGGHNG+KSV N+ G+ + +R++IGIGRPP M
Sbjct: 85 NVIIIYDDLDLNTGHLRIKSSGGHGGHNGVKSVFNHL-GSTDISRIKIGIGRPPEYMTVP 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L KF+ R++ A++E VE + ++L +G+ ++ +N
Sbjct: 144 DYVLGKFDKEERDKAARAVREAVEAIGVILDQGIEQAMNKYN 185
>gi|253576882|ref|ZP_04854207.1| peptidyl-tRNA hydrolase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251843749|gb|EES71772.1| peptidyl-tRNA hydrolase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 186
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 84/161 (52%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D A GI + CKA G+G + V+L KP TYMNLSGE+ YYK +
Sbjct: 26 VDELARRHGIEIKQSKCKALIGEGMLPGGKVVLIKPMTYMNLSGEAVRAYMDYYKASIED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DD+ G RLR+ G GGHNG+KS++ + G + F R+R+GI RP
Sbjct: 86 MIVVYDDLDTELGRNRLRYQGSAGGHNGIKSIIQHI-GTQTFNRIRMGISRPEPGYAVVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F + +D ++Q + L+ L ++ FN
Sbjct: 145 YVLSPFPKKDKPLLDQSIQAACDALEYSLDHTFEQTMAKFN 185
>gi|417043747|ref|ZP_11948575.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus MTCC 5462]
gi|328478087|gb|EGF47960.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus MTCC 5462]
Length = 185
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 84/151 (55%), Gaps = 2/151 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A+ G+++N + A V D V L KPQTYMN SG + L YY++ L+
Sbjct: 25 VVDGLAQRMGLTLNKLEFDAATATTRVDDEKVFLVKPQTYMNASGRAVRQLMMYYQIRLD 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV HDDM L G LRLR G GGHNG+K +++ G+ EF RL+IGI P Q
Sbjct: 85 EILVVHDDMDLTLGKLRLRQRGSAGGHNGIKDIISA-TGSDEFYRLKIGIQHPQRQR-VV 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
++L F + ID A+ + + L+ L+
Sbjct: 143 DWVLTPFAKTDQPVIDAAITKADDALEDWLN 173
>gi|349687298|ref|ZP_08898440.1| peptidyl-tRNA hydrolase [Gluconacetobacter oboediens 174Bp2]
Length = 190
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 78/139 (56%), Gaps = 1/139 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D A+ G S + +G +G VLL KP TYMNLSGES AA+YKLP +
Sbjct: 26 VDRIADRHGFSPWRKRFRGEIAEGMIGRHKVLLLKPMTYMNLSGESVQQAAAFYKLPADA 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+ FHD++ L G +R++ GG GHNGL+S M+ G +E+ R+R+GIG P +
Sbjct: 86 ITAFHDELDLEPGRIRVKRGGGAAGHNGLRS-MDRMLGTKEYWRVRLGIGHPGSRERVTG 144
Query: 122 FLLQKFNAIARERIDTALQ 140
+L F+ RE +D L
Sbjct: 145 HVLGDFSRTDREWLDPMLD 163
>gi|451816996|ref|YP_007453197.1| peptidyl-tRNA hydrolase Pth [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451782975|gb|AGF53943.1| peptidyl-tRNA hydrolase Pth [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 191
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 89/162 (54%), Gaps = 3/162 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A+ I +N K +G+GF+ V+L KP TYMNLSGES + +Y + +
Sbjct: 25 VVDNIAKEYNIQINRQKFKGIYGEGFINGQKVILLKPTTYMNLSGESVREVVNFYNIEND 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+L+ +DD+ L G LR+R G GGHNG+KS++ + G+ F+R++IG+G+P D
Sbjct: 85 EILIIYDDISLDVGKLRIREKGSAGGHNGIKSIIAHL-GSEVFSRIKIGVGQP--NSDLV 141
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+L KF+ +D +++ ++ + + FN
Sbjct: 142 KHVLGKFSKEEMVTLDESIEAATNATAEIIKNDVKTAMNQFN 183
>gi|375091417|ref|ZP_09737710.1| peptidyl-tRNA hydrolase [Helcococcus kunzii ATCC 51366]
gi|374563517|gb|EHR34830.1| peptidyl-tRNA hydrolase [Helcococcus kunzii ATCC 51366]
Length = 191
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 90/165 (54%), Gaps = 1/165 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ G+ ++ + K ++ Q + ++L KP+T+MN SGES P Y+ +
Sbjct: 25 VIDKLADHFGVKLDKLKFKGSYAQVRYENEKIILLKPETFMNASGESVQPFMNYFGIEPE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V DD+ + G +R+R NG G HNGLKSV+N N+ F R+++ + + P MD
Sbjct: 85 NLIVIVDDIDIKFGTVRIRANGSAGTHNGLKSVINRI-NNKNFTRIKLAVNQKPTYMDLA 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQ 165
F+L KF R+ +D ++ + + +L + + N+I+
Sbjct: 144 DFVLSKFTDSERKIVDKEVELAKDAVLEILKSDVNTAMNKINSIE 188
>gi|375306204|ref|ZP_09771505.1| peptidyl-tRNA hydrolase [Paenibacillus sp. Aloe-11]
gi|375081791|gb|EHS59998.1| peptidyl-tRNA hydrolase [Paenibacillus sp. Aloe-11]
Length = 186
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 84/161 (52%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+DA A I +N CKA G+G +G +L KP TYMNLSGES YYK L
Sbjct: 26 LDALASRHNIQINQSKCKALIGEGHIGGVKTVLIKPMTYMNLSGESLRAYMDYYKADLED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DD+ G +RLR+ G GGHNG+KS++ + G + F R+R+GI RP
Sbjct: 86 LIVVYDDLDTEVGKIRLRYQGSAGGHNGIKSIIQH-TGTQSFNRIRMGISRPEPGHAIVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F ++ + +++ L+ L + FN
Sbjct: 145 YVLGTFPKKEKDLLTGMIEDTCNALEYSLGHPFERTMAEFN 185
>gi|41407076|ref|NP_959912.1| peptidyl-tRNA hydrolase [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|254774033|ref|ZP_05215549.1| peptidyl-tRNA hydrolase [Mycobacterium avium subsp. avium ATCC
25291]
gi|417747057|ref|ZP_12395535.1| peptidyl-tRNA hydrolase [Mycobacterium avium subsp.
paratuberculosis S397]
gi|440776568|ref|ZP_20955408.1| peptidyl-tRNA hydrolase [Mycobacterium avium subsp.
paratuberculosis S5]
gi|68052977|sp|Q741V9.1|PTH_MYCPA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|41395427|gb|AAS03295.1| Pth [Mycobacterium avium subsp. paratuberculosis K-10]
gi|336461343|gb|EGO40214.1| peptidyl-tRNA hydrolase [Mycobacterium avium subsp.
paratuberculosis S397]
gi|436723246|gb|ELP47092.1| peptidyl-tRNA hydrolase [Mycobacterium avium subsp.
paratuberculosis S5]
Length = 191
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 83/123 (67%), Gaps = 1/123 (0%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V++AKP+ YMN SG GPLA +Y +P ++V HDD+ L G +RL+ GG GGHNGL+
Sbjct: 60 VVVAKPRCYMNESGRQVGPLAKFYSVPPGDIIVIHDDLDLDFGRIRLKIGGGEGGHNGLR 119
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
SV N G+++F R+RIGIGRPPG+ DP AF+L+ F + R + T ++ + +LL+
Sbjct: 120 SVANAL-GSKDFQRVRIGIGRPPGRKDPAAFVLENFTSTERADVPTICEQAADATELLIE 178
Query: 152 KGL 154
GL
Sbjct: 179 LGL 181
>gi|199598793|ref|ZP_03212205.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus HN001]
gi|199590298|gb|EDY98392.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus HN001]
Length = 183
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 84/151 (55%), Gaps = 2/151 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A+ G+++N + A V D V L KPQTYMN SG + L YY++ L+
Sbjct: 23 VVDGLAQRMGLTLNKLEFDAATATTRVDDEKVFLVKPQTYMNASGRAVRQLMMYYQIRLD 82
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV HDDM L G LRLR G GGHNG+K +++ G+ EF RL+IGI P Q
Sbjct: 83 EILVVHDDMDLTLGKLRLRQRGSAGGHNGIKDIISA-TGSDEFYRLKIGIQHPQRQR-VV 140
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
++L F + ID A+ + + L+ L+
Sbjct: 141 DWVLTPFAKTDQPVIDAAITKADDALEDWLN 171
>gi|333026423|ref|ZP_08454487.1| putative peptidyl-tRNA hydrolase [Streptomyces sp. Tu6071]
gi|332746275|gb|EGJ76716.1| putative peptidyl-tRNA hydrolase [Streptomyces sp. Tu6071]
Length = 202
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 82/132 (62%), Gaps = 2/132 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V++AKP +YMNLSG L +YK+PL RV+ HD++ + GVLRL+ GG GHNGLK
Sbjct: 73 VVVAKPLSYMNLSGGPVTALRDFYKVPLERVVAVHDELDIDYGVLRLKLGGGDNGHNGLK 132
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ + R+R GIGRPPG+M F+L+ F++ R+ +D + + ++ L++
Sbjct: 133 SMTKAM--GPAYHRVRFGIGRPPGRMQVADFVLKDFSSGERKELDYFVDRAADAVEALVT 190
Query: 152 KGLTESARHFNT 163
+GL + +N+
Sbjct: 191 QGLERAQGSYNS 202
>gi|427727442|ref|YP_007073679.1| peptidyl-tRNA hydrolase [Nostoc sp. PCC 7524]
gi|427363361|gb|AFY46082.1| peptidyl-tRNA hydrolase [Nostoc sp. PCC 7524]
Length = 211
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 93/169 (55%), Gaps = 8/169 (4%)
Query: 2 IDAFAESQGISM-NTVHCKATFGQGFV-GDAPVLLAKPQTYMNLSGESTGPLAAYYKLPL 59
++A A S I + + FG+G G V L KP TYMN SG++ + ++YKLP
Sbjct: 38 VEALARSWQIPLAENRKFQGEFGEGIAPGGVKVRLLKPLTYMNRSGQAIQAVTSWYKLPA 97
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQM-- 117
VLV +DDM LP G RLR +G GGHNG+KS + + + F RLRIGIG+P +
Sbjct: 98 ESVLVIYDDMDLPIGKTRLRLSGSAGGHNGMKSAIAHLN-TQNFPRLRIGIGKPKNAVNG 156
Query: 118 ---DPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
D +++L KF + + LQ VE ++L L +G+ ++ N+
Sbjct: 157 DNSDTVSYVLGKFTTTETQLMSLVLQFVVECVELSLKQGVEKAMNRCNS 205
>gi|410656906|ref|YP_006909277.1| Peptidyl-tRNA hydrolase [Dehalobacter sp. DCA]
gi|410659944|ref|YP_006912315.1| Peptidyl-tRNA hydrolase [Dehalobacter sp. CF]
gi|409019261|gb|AFV01292.1| Peptidyl-tRNA hydrolase [Dehalobacter sp. DCA]
gi|409022300|gb|AFV04330.1| Peptidyl-tRNA hydrolase [Dehalobacter sp. CF]
Length = 190
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 84/162 (51%), Gaps = 2/162 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A +G+S + + D + KP TYMNLSG + G L +YYK+
Sbjct: 25 LLDRIAAQEGLSFRN-DFRGKVAEMRNKDERIFFLKPITYMNLSGLAVGELISYYKINTQ 83
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV HDDM LP G +RLR G GGHNGLKS++ G++EF RL+IG+GRP + D
Sbjct: 84 NILVVHDDMDLPLGRIRLRAKGSAGGHNGLKSIIAEL-GSQEFWRLKIGVGRPKAEFDVV 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+L F + +D L + L + E+ FN
Sbjct: 143 NHVLSTFAKEEKAVLDGTLDRAQRAVGLWIEGHGDEAMNLFN 184
>gi|118465371|ref|YP_880401.1| peptidyl-tRNA hydrolase [Mycobacterium avium 104]
gi|166227336|sp|A0QBW3.1|PTH_MYCA1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|118166658|gb|ABK67555.1| peptidyl-tRNA hydrolase [Mycobacterium avium 104]
Length = 191
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 83/123 (67%), Gaps = 1/123 (0%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V++AKP+ YMN SG GPLA +Y +P ++V HDD+ L G +RL+ GG GGHNGL+
Sbjct: 60 VVVAKPRCYMNESGRQVGPLAKFYSVPPGDIIVIHDDLDLDFGRIRLKIGGGEGGHNGLR 119
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
SV N G+++F R+RIGIGRPPG+ DP AF+L+ F + R + T ++ + +LL+
Sbjct: 120 SVSNAL-GSKDFQRVRIGIGRPPGRKDPAAFVLENFTSTERADVPTICEQAADATELLIE 178
Query: 152 KGL 154
GL
Sbjct: 179 LGL 181
>gi|453049720|gb|EME97295.1| peptidyl-tRNA hydrolase [Streptomyces mobaraensis NBRC 13819 = DSM
40847]
Length = 198
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 93/169 (55%), Gaps = 9/169 (5%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAP------VLLAKPQTYMNLSGESTGPLAAY 54
+ D AE G +A +G +G AP V++AKP ++MNLSG T L +
Sbjct: 33 VADLLAERIGAKFKAHKARAQVVEGRLG-APGPSSRRVVVAKPMSFMNLSGGPTAALRDF 91
Query: 55 YKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPP 114
YK+P+ R++ HD++ + G LRL+ GG GHNGLKS+ ++ R+R GIGRPP
Sbjct: 92 YKVPVGRIVAVHDELDIDFGQLRLKLGGGDNGHNGLKSITKAL--GSDYCRVRFGIGRPP 149
Query: 115 GQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
G+M F+L+ F+A R+ + + + ++ L+ GL + +N+
Sbjct: 150 GRMQVADFVLKDFSAAERKDLAFEVDRAADAVESLIVDGLERAQGTYNS 198
>gi|15896464|ref|NP_349813.1| peptidyl-tRNA hydrolase [Clostridium acetobutylicum ATCC 824]
gi|337738423|ref|YP_004637870.1| peptidyl-tRNA hydrolase [Clostridium acetobutylicum DSM 1731]
gi|384459933|ref|YP_005672353.1| peptidyl-tRNA hydrolase [Clostridium acetobutylicum EA 2018]
gi|21263854|sp|Q97E97.1|PTH_CLOAB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|15026289|gb|AAK81153.1|AE007817_7 Stage V sporulation protein C, peptidyl-tRNA hydrolase [Clostridium
acetobutylicum ATCC 824]
gi|325510622|gb|ADZ22258.1| peptidyl-tRNA hydrolase [Clostridium acetobutylicum EA 2018]
gi|336291901|gb|AEI33035.1| peptidyl-tRNA hydrolase [Clostridium acetobutylicum DSM 1731]
Length = 187
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 93/164 (56%), Gaps = 3/164 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
I+ A IS++ K +G+G + V+L KP TYMNLSGES A YYK+
Sbjct: 26 IENIAAKHNISIDKKGFKGLYGKGIIDGEKVILLKPYTYMNLSGESVVEAANYYKINKEN 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DD+ L G +R+R G GGHNG+K+++ + + EF R+++G+G P +
Sbjct: 86 IVVIYDDISLDVGKIRIRTKGSAGGHNGIKNIVLHLS-SEEFPRVKVGVGEPTENL--VN 142
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQ 165
++L KF+ R++I+ L E ++ ++ G+ + FN ++
Sbjct: 143 YVLGKFSQDERKKIEEVLNIVTEAVECMVVDGVQNAMNKFNGLK 186
>gi|443626834|ref|ZP_21111244.1| putative Peptidyl-tRNA hydrolase [Streptomyces viridochromogenes
Tue57]
gi|443339688|gb|ELS53920.1| putative Peptidyl-tRNA hydrolase [Streptomyces viridochromogenes
Tue57]
Length = 200
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 81/132 (61%), Gaps = 2/132 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+LAKP +YMNLSG G L +YK+P+ ++ HD++ + G LRL+ GG GHNGLK
Sbjct: 71 VILAKPMSYMNLSGGPVGALRDFYKVPVGNIVAVHDELDIDFGTLRLKLGGGDNGHNGLK 130
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ ++ R+R GIGRPPG+M F+L+ F++ R+ +D + + ++ L+
Sbjct: 131 SMTKAM--GSDYHRVRFGIGRPPGRMPVADFVLKDFSSAERKELDYFVDRAADAVECLVI 188
Query: 152 KGLTESARHFNT 163
+GL + +N+
Sbjct: 189 EGLERAQSTYNS 200
>gi|390457080|ref|ZP_10242608.1| peptidyl-tRNA hydrolase [Paenibacillus peoriae KCTC 3763]
Length = 186
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 84/161 (52%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+DA A I +N CKA G+G +G +L KP TYMNLSGES YYK L
Sbjct: 26 LDALASRHNIQINQSKCKALIGEGHIGGVKTVLIKPMTYMNLSGESLRAYMDYYKADLED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DD+ G +RLR+ G GGHNG+KS++ + G + F R+R+GI RP
Sbjct: 86 LIVVYDDLDTEVGKIRLRYQGSAGGHNGIKSIIQH-TGTQSFNRIRMGISRPEPGYAIVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F ++ + +++ L+ L + FN
Sbjct: 145 YVLGTFPRKEKDLLIGMIEDTCSALEYSLGHPFERTMAEFN 185
>gi|345018829|ref|YP_004821182.1| peptidyl-tRNA hydrolase [Thermoanaerobacter wiegelii Rt8.B1]
gi|344034172|gb|AEM79898.1| Peptidyl-tRNA hydrolase [Thermoanaerobacter wiegelii Rt8.B1]
Length = 184
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 92/162 (56%), Gaps = 3/162 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ G+++ + K+ G+G ++L KPQT+MN SGE+ +YK+ L
Sbjct: 25 VIDELAKKLGMNVTKLKFKSLVGEGNFKGEKIILLKPQTFMNSSGEALYDAVNFYKILLE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V+V +DD L G +R+R G GGHNG+KS++ + EF R+RIGIG+P Q D
Sbjct: 85 NVIVIYDDKDLDVGKIRIRKKGSSGGHNGMKSII-YLLNSEEFPRVRIGIGKP--QKDLV 141
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+ +L KF ++ ID A+ + + + ++ G+ + FN
Sbjct: 142 SHVLGKFEESEKKLIDEAVIKAADAVIDIIENGIEHAMSKFN 183
>gi|445063566|ref|ZP_21375748.1| peptidyl-tRNA hydrolase [Brachyspira hampsonii 30599]
gi|444505055|gb|ELV05635.1| peptidyl-tRNA hydrolase [Brachyspira hampsonii 30599]
Length = 298
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 90/151 (59%), Gaps = 2/151 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID AE+ I+ + K+ + + + +L KPQT+MNLSGES ++ ++ +
Sbjct: 27 LIDKIAENFNINFDNNKKKSLYARSKEKNIEYILLKPQTFMNLSGESAIFISKFFNIKPE 86
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DDM +P G +++ G GGHNG+KS++++ + + +F R+RIGIGRP
Sbjct: 87 DIIVIYDDMDIPFGTFKIKKGGSSGGHNGIKSLISHLQSD-DFTRIRIGIGRPSAGKKVN 145
Query: 121 AFLLQKFNAIARERIDTALQEG-VEVLKLLL 150
++L F+ RE +DT + + ++ +K+ L
Sbjct: 146 DYVLSNFSKKEREELDTVIADDIIDAVKIAL 176
>gi|377571476|ref|ZP_09800594.1| peptidyl-tRNA hydrolase [Gordonia terrae NBRC 100016]
gi|377531306|dbj|GAB45759.1| peptidyl-tRNA hydrolase [Gordonia terrae NBRC 100016]
Length = 188
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 100/154 (64%), Gaps = 6/154 (3%)
Query: 16 VHCK--ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPC 73
VH K A + +G VL+AKP+TYMN SG GPLA +Y + ++ ++V HD++ +
Sbjct: 39 VHKKSGAEVAEVRLGGQSVLVAKPRTYMNESGRQIGPLAKFYSVTVDDLIVVHDELDIDF 98
Query: 74 GVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARE 133
G +RL+ GG GGHNGL+S+ + G R++ R+RIGIGRPPG+ DP F+L+ F + AR
Sbjct: 99 GAVRLKRGGGEGGHNGLRSI-SQVLGTRDYLRVRIGIGRPPGRQDPADFVLKPFPSSARN 157
Query: 134 RIDTALQEGVEVLKLLLSKGLTESARHFNTIQKY 167
++ + G + ++LLL + L ESA+ NT+ +
Sbjct: 158 EVELLIANGCDAVELLLGQDL-ESAQ--NTVHAW 188
>gi|300864784|ref|ZP_07109634.1| Peptidyl-tRNA hydrolase [Oscillatoria sp. PCC 6506]
gi|300337188|emb|CBN54782.1| Peptidyl-tRNA hydrolase [Oscillatoria sp. PCC 6506]
Length = 211
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 96/167 (57%), Gaps = 6/167 (3%)
Query: 2 IDAFAESQGISMN-TVHCKATFGQGF-VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPL 59
+DA A S IS++ +A FG+G + L KP TYMNLSG++ +YKLP
Sbjct: 38 VDALANSWQISLSENRKFQAEFGEGMGPQREKIRLLKPLTYMNLSGQAIRAAIDWYKLPP 97
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
VL +DDM LP G LRLR +G GGHNG+KS + + G +F RLRIGIG+P +
Sbjct: 98 ESVLAVYDDMDLPVGRLRLRLSGSAGGHNGMKSAIAHL-GTDKFPRLRIGIGKPQSSSND 156
Query: 120 K---AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
K + +L KF+ + +D L+ VE ++L +G+ ++ +N+
Sbjct: 157 KETISHVLGKFSLEESQLMDKVLKLVVEAVELSQKQGVEKAMSLYNS 203
>gi|153952804|ref|YP_001393569.1| peptidyl-tRNA hydrolase [Clostridium kluyveri DSM 555]
gi|219853469|ref|YP_002470591.1| hypothetical protein CKR_0126 [Clostridium kluyveri NBRC 12016]
gi|189038284|sp|A5N4J0.1|PTH_CLOK5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783863|sp|B9DY52.1|PTH_CLOK1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|146345685|gb|EDK32221.1| Pth [Clostridium kluyveri DSM 555]
gi|219567193|dbj|BAH05177.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 187
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 96/162 (59%), Gaps = 3/162 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
ID ++ I++N K +G+GF+G V+L KP TYMNLSGES +YK+ +
Sbjct: 25 FIDLVSKKYNITLNREKFKGNYGEGFIGQNKVILLKPGTYMNLSGESVREAVNFYKIEND 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
R+++ +DD+ + G R+RH G GGHNG+K+++ N G F R++IGIG P +D
Sbjct: 85 RMIIIYDDIDIDIGRFRIRHRGSAGGHNGIKNIILNL-GTDVFPRIKIGIGHP--NVDLV 141
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+++L KF+ R I+ L+ VE L+ ++ G+ + FN
Sbjct: 142 SYVLGKFSEDDRINIEKVLKTSVEALECIMDFGIEVAMNKFN 183
>gi|270290198|ref|ZP_06196424.1| peptidyl-tRNA hydrolase [Pediococcus acidilactici 7_4]
gi|270281735|gb|EFA27567.1| peptidyl-tRNA hydrolase [Pediococcus acidilactici 7_4]
Length = 185
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 82/150 (54%), Gaps = 2/150 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++DA A+ G+ +H +A G+ F VLL KP TYMN SG + PL YY L L
Sbjct: 25 VVDALAKKYGVDHFKIHHEAMVGEFFSNGEKVLLVKPTTYMNDSGRAVRPLMDYYDLALT 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DDM +P G +RLR G GGHNG+KS++ + G +F RLR+GI P Q
Sbjct: 85 DLIVVYDDMDMPVGKIRLRQKGSAGGHNGIKSLIAHL-GTEKFRRLRVGIEHPAHQ-KVV 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLL 150
++L +F + + +Q + L L
Sbjct: 143 DYVLGRFTKEQKADFEIGVQNAIAALDDWL 172
>gi|146329537|ref|YP_001208995.1| peptidyl-tRNA hydrolase [Dichelobacter nodosus VCS1703A]
gi|172047324|sp|A5EWU9.1|PTH_DICNV RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|146233007|gb|ABQ13985.1| peptidyl-tRNA hydrolase [Dichelobacter nodosus VCS1703A]
Length = 189
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 88/142 (61%), Gaps = 2/142 (1%)
Query: 20 ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 79
A FG+ + + L KPQT+MN SG+S + +Y + ++L+ HD++ LP G ++L+
Sbjct: 46 AEFGEIAINQQKIFLLKPQTFMNASGKSLAAVCRFYHIEPQQILIIHDELDLPEGKIKLK 105
Query: 80 HNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTAL 139
+GGHGGHNGL+ ++ +++F RLRIGIGRP ++L+ +A ER++ +L
Sbjct: 106 KSGGHGGHNGLRDIIAAL-ASQDFYRLRIGIGRPENSTQVIDYVLKAPSATHMERLNESL 164
Query: 140 QEGVEVLKLLLSKGLTESARHF 161
G + ++ L+++G E A H+
Sbjct: 165 SYGKKAIEKLITEG-DEKAMHW 185
>gi|395772729|ref|ZP_10453244.1| peptidyl-tRNA hydrolase [Streptomyces acidiscabies 84-104]
Length = 199
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 83/132 (62%), Gaps = 2/132 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
+LAKP ++MNLSG L +YK+PL+ ++ HD++ + G LRL+ GG GHNGLK
Sbjct: 70 AVLAKPMSFMNLSGGPVNALRDFYKVPLSNIVAIHDELDIDYGTLRLKLGGGDNGHNGLK 129
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ + ++ R+R GIGRPPG+M F+L+ F++ R+ +D + + ++ L++
Sbjct: 130 SMTKSM--GPDYHRIRCGIGRPPGRMQVADFVLKDFSSTERKELDWFVDRAADAVEALVT 187
Query: 152 KGLTESARHFNT 163
+GL + + +N+
Sbjct: 188 EGLERAQQSYNS 199
>gi|392531775|ref|ZP_10278912.1| peptidyl-tRNA hydrolase [Carnobacterium maltaromaticum ATCC 35586]
gi|414082571|ref|YP_006991271.1| peptidyl-tRNA hydrolase [Carnobacterium maltaromaticum LMA28]
gi|412996147|emb|CCO09956.1| peptidyl-tRNA hydrolase [Carnobacterium maltaromaticum LMA28]
Length = 189
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 87/163 (53%), Gaps = 4/163 (2%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D A + N A + + F+G VLL KPQT+MN SG++ PL YY L +
Sbjct: 26 MDEMAFQHKLQFNKSKFDAVYAEAFIGTEKVLLVKPQTFMNDSGQAVRPLMDYYDLGIED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRP-PGQMDPK 120
++V +DD+ LP G +RLR G GGHNG+KS++ + G +F R+RIGI RP PGQ
Sbjct: 86 LVVVYDDLDLPVGKIRLRQKGSAGGHNGIKSLIQHL-GTSDFNRIRIGIDRPFPGQTVIN 144
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLS-KGLTESARHFN 162
+L F E I A+++ E L + E+ FN
Sbjct: 145 H-VLGAFPKEHHEDILFAVKDAAEALNYWIEGHTFLETMNQFN 186
>gi|225621396|ref|YP_002722655.1| peptidyl-tRNA hydrolase [Brachyspira hyodysenteriae WA1]
gi|225216217|gb|ACN84951.1| putative peptidyl-tRNA hydrolase [Brachyspira hyodysenteriae WA1]
Length = 297
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 90/151 (59%), Gaps = 2/151 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A++ I+ + K+ + + D +L KPQT+MNLSGES ++ ++ +
Sbjct: 26 LIDKIAQNFNINFDNNKKKSLYARSKEKDIEYILLKPQTFMNLSGESAIFISKFFNIKPE 85
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DDM +P G +++ G GGHNG+KS++++ + + +F R+RIGIGRP
Sbjct: 86 DIIVIYDDMDIPFGTFKIKKGGSSGGHNGIKSLISHLQSD-DFTRIRIGIGRPSAGKKVN 144
Query: 121 AFLLQKFNAIARERIDTAL-QEGVEVLKLLL 150
++L F+ RE +DT + + ++ +K+ L
Sbjct: 145 DYVLSNFSKKEREELDTIIANDIIDAVKIAL 175
>gi|220908888|ref|YP_002484199.1| aminoacyl-tRNA hydrolase [Cyanothece sp. PCC 7425]
gi|219865499|gb|ACL45838.1| Aminoacyl-tRNA hydrolase [Cyanothece sp. PCC 7425]
Length = 213
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 94/159 (59%), Gaps = 16/159 (10%)
Query: 1 MIDAFAESQGISMNT-VHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPL 59
++DA A+ IS++ +A FG+G V A V L KP TYMN SG+S + +YK
Sbjct: 36 VVDALADRWHISLSPHKRFQAEFGEGAVRGATVQLLKPTTYMNNSGQSVRAVLDWYKRSP 95
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPP---GQ 116
VLV +DDM LP G LRLR NG GGHNG++S++ + G ++F RLR+GIG P G+
Sbjct: 96 QSVLVVYDDMDLPLGKLRLRLNGSAGGHNGMRSLIAHL-GTQDFPRLRLGIGNPRQAGGE 154
Query: 117 MDPKAFLLQKFN-----------AIARERIDTALQEGVE 144
D +L KF+ +A + I+T+L++GVE
Sbjct: 155 KDAIPHVLGKFSPAEGPIVAEVLELATKAIETSLRDGVE 193
>gi|167036598|ref|YP_001664176.1| peptidyl-tRNA hydrolase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|320115025|ref|YP_004185184.1| peptidyl-tRNA hydrolase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|238687682|sp|B0KBG1.1|PTH_THEP3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166855432|gb|ABY93840.1| Aminoacyl-tRNA hydrolase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|319928116|gb|ADV78801.1| peptidyl-tRNA hydrolase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 184
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 92/162 (56%), Gaps = 3/162 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ G+++ + K+ G+G ++L KPQT++N SGE+ +YK+PL
Sbjct: 25 VIDELAKKLGMNVTKLKFKSLVGEGNFKGEKIILLKPQTFVNSSGEALYDAVNFYKIPLE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V+V +DD L G +R+R G GGHNG+ S++ + EF R+RIGIG+P Q D
Sbjct: 85 NVIVIYDDKDLDVGKIRIRKKGSSGGHNGMNSII-YLLNSEEFPRVRIGIGKP--QKDLV 141
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+ +L KF ++ ID A+ + + + ++ G+ + FN
Sbjct: 142 SHVLGKFEESEKKLIDEAVIKAADAVIDIIENGIEHAMSKFN 183
>gi|404483818|ref|ZP_11019035.1| peptidyl-tRNA hydrolase [Clostridiales bacterium OBRC5-5]
gi|404343177|gb|EJZ69544.1| peptidyl-tRNA hydrolase [Clostridiales bacterium OBRC5-5]
Length = 209
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 92/163 (56%), Gaps = 1/163 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+++ A G ++ K F + +G+ ++ +PQTYMN SGES Y+K+
Sbjct: 44 VVEKLAYELGEEISERKYKGLFAKVRIGNEKAIILEPQTYMNNSGESVRAFMDYFKIEAA 103
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V+V +DD+ L G LR+R G GGHNG+KS++ + G +F R+++G+G P +MD
Sbjct: 104 DVIVVYDDINLEPGNLRIRLKGSAGGHNGIKSLIAHM-GTSDFPRVKVGVGEKPARMDLA 162
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
+L +F+ ++ +D A + +EV+KL++ + +NT
Sbjct: 163 DHVLGRFSDTDKKLLDEAASDAIEVIKLMVDGQYDTAMNRYNT 205
>gi|282898618|ref|ZP_06306606.1| Peptidyl-tRNA hydrolase [Cylindrospermopsis raciborskii CS-505]
gi|281196486|gb|EFA71395.1| Peptidyl-tRNA hydrolase [Cylindrospermopsis raciborskii CS-505]
Length = 210
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 97/169 (57%), Gaps = 8/169 (4%)
Query: 2 IDAFAESQGISMN-TVHCKATFGQGF-VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPL 59
IDA + + I++ + FG+G +G + + KP TYMN SGES + ++YKLP
Sbjct: 38 IDAISRNWHIAVTENRKFQGQFGEGLALGSKKIRILKPLTYMNRSGESIQAVTSWYKLPP 97
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPG---- 115
VLV +DDM LP G +RLR +G GGHNG+KS +++ ++ F RLRIGIG+P
Sbjct: 98 ESVLVIYDDMDLPLGKIRLRLSGSAGGHNGMKSTISHLN-SQNFPRLRIGIGKPKNLPNN 156
Query: 116 -QMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
D + +L KF+ + ID L VE ++L L +G+ ++ N+
Sbjct: 157 DDGDTVSHVLGKFSPQEAKLIDPILAFVVECVELTLKQGVEKAMNRCNS 205
>gi|254384996|ref|ZP_05000331.1| peptidyl-tRNA hydrolase [Streptomyces sp. Mg1]
gi|194343876|gb|EDX24842.1| peptidyl-tRNA hydrolase [Streptomyces sp. Mg1]
Length = 196
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 82/132 (62%), Gaps = 2/132 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+LAKP ++MNLSG L +YK+PL R++ HD++ + LRL+ GG GHNGLK
Sbjct: 67 VVLAKPMSFMNLSGGPVTALRDFYKVPLERIVAIHDELDIDYPTLRLKLGGGDNGHNGLK 126
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ + ++ R+R GIGRPPG+M F+L+ F++ R+ +D + + ++ L++
Sbjct: 127 SMTKSM--GPDYHRVRCGIGRPPGRMQVADFVLKDFSSTERKELDWFVDRAADAVECLIA 184
Query: 152 KGLTESARHFNT 163
+GL + +N+
Sbjct: 185 EGLERAQSSYNS 196
>gi|327399266|ref|YP_004340135.1| peptidyl-tRNA hydrolase [Hippea maritima DSM 10411]
gi|327181895|gb|AEA34076.1| Peptidyl-tRNA hydrolase [Hippea maritima DSM 10411]
Length = 193
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 92/148 (62%), Gaps = 4/148 (2%)
Query: 19 KATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRL 78
K FG+ +G V + KP TYMNLSG S G + ++YK+PLNR++V HDD+ LP G +++
Sbjct: 45 KGFFGEFSLGSYKVGVLKPITYMNLSGISVGEVFSFYKIPLNRLIVIHDDVDLPLGRIKI 104
Query: 79 RHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTA 138
+ N GGH G++S++ +++FAR++IG+GR D ++L+ F E ++ A
Sbjct: 105 KKNSSSGGHKGVESIIQTL-SSKDFARVKIGVGREGNVRD---YVLRNFKENELEIVNQA 160
Query: 139 LQEGVEVLKLLLSKGLTESARHFNTIQK 166
++ + + ++ +GL ++ +N++ +
Sbjct: 161 VRLSADAVVCIIKEGLNKAMNEYNSLNR 188
>gi|366090578|ref|ZP_09456944.1| peptidyl-tRNA hydrolase [Lactobacillus acidipiscis KCTC 13900]
Length = 185
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 84/151 (55%), Gaps = 2/151 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+++ A + N C+A F+ + VLL KP T+MN SG + GPL Y+K+ +
Sbjct: 25 VVEELANRYNVDFNKEKCEALIATAFISNEKVLLVKPTTFMNDSGRAVGPLLDYFKIEVE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+++ HDDM L G +RLR G GGHNG+KSV+ + + F R+++GI P QM
Sbjct: 85 DLIIIHDDMDLQLGRIRLRQKGSAGGHNGIKSVIAHVH-TQAFKRIKVGIDHPQ-QMSVV 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
++L +F+ + + A+ + + ++ L+
Sbjct: 143 NWVLSRFSVTEQALMKDAVTQACDAVEYWLA 173
>gi|300790049|ref|YP_003770340.1| peptidyl-tRNA hydrolase, PTH1 family [Amycolatopsis mediterranei
U32]
gi|384153572|ref|YP_005536388.1| peptidyl-tRNA hydrolase [Amycolatopsis mediterranei S699]
gi|399541929|ref|YP_006554591.1| peptidyl-tRNA hydrolase, PTH1 family [Amycolatopsis mediterranei
S699]
gi|299799563|gb|ADJ49938.1| peptidyl-tRNA hydrolase, PTH1 family [Amycolatopsis mediterranei
U32]
gi|340531726|gb|AEK46931.1| peptidyl-tRNA hydrolase [Amycolatopsis mediterranei S699]
gi|398322699|gb|AFO81646.1| peptidyl-tRNA hydrolase, PTH1 family [Amycolatopsis mediterranei
S699]
Length = 197
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 89/163 (54%), Gaps = 1/163 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A G T +G + V+L KP++YMNLSG A +YK+ +
Sbjct: 35 VLDELAARIGGKFKTHKSGGEVLEGRLAGRRVVLVKPRSYMNLSGGPVAGAAKFYKIEPS 94
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V+V HD++ + G L+L+ GG GHNGL+S+ + G R++ R+R GIGRPPG+ DP
Sbjct: 95 GVVVVHDELDVDFGTLKLKFGGGDNGHNGLRSISKSL-GTRDYYRVRFGIGRPPGRQDPA 153
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
F+L+ F+ + R+ + + + + L+ GL + F+
Sbjct: 154 DFVLKDFSTVERKELPLEVDRCADATEALIGTGLAAAQNSFHA 196
>gi|229829773|ref|ZP_04455842.1| hypothetical protein GCWU000342_01870 [Shuttleworthia satelles DSM
14600]
gi|229791762|gb|EEP27876.1| hypothetical protein GCWU000342_01870 [Shuttleworthia satelles DSM
14600]
Length = 212
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 89/165 (53%), Gaps = 2/165 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PLN 60
ID A+ GI + + +A +G+G + VLL KP TYMN SG S +Y+L PL
Sbjct: 38 IDRLADQYGICLREMKFEALYGKGLIEGRQVLLVKPTTYMNDSGRSLQQFVRFYQLDPLE 97
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV DD+ L CGV+R+R G GGHNGLKS++ G F R+R+G+G+ P D
Sbjct: 98 DMLVISDDVTLDCGVIRVRKQGSAGGHNGLKSIIACL-GTDCFPRVRVGVGKVPTGGDMI 156
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQ 165
A +L + RE + + E +++ + E+ +N ++
Sbjct: 157 AHVLGRIRPEERENMALGEEHAAEAAVMVMEGQIVEAMNRYNGMR 201
>gi|169335435|ref|ZP_02862628.1| hypothetical protein ANASTE_01849 [Anaerofustis stercorihominis DSM
17244]
gi|169258173|gb|EDS72139.1| aminoacyl-tRNA hydrolase [Anaerofustis stercorihominis DSM 17244]
Length = 186
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 87/161 (54%), Gaps = 2/161 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D ++ I +N KA +G+G + V L KP+TYMNLSGES Y+K+P
Sbjct: 26 VDYISDEYNIKINKTKFKADYGKGKLAGEEVFLIKPRTYMNLSGESVKLFKDYFKIPEEN 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+ V +DD+ LP G LR+R NGG G HNG+KS++ G + F R R+G+G P D
Sbjct: 86 IFVIYDDIELPKGKLRIRKNGGPGTHNGMKSIVKEI-GTKNFPRFRMGVGSPE-HGDLVN 143
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F+A I + + + L K L ++ +N
Sbjct: 144 YVLGRFSAEELPVIKDMVIMTSKAIFTALDKDLDKAMNMYN 184
>gi|302530285|ref|ZP_07282627.1| peptidyl-tRNA hydrolase [Streptomyces sp. AA4]
gi|302439180|gb|EFL10996.1| peptidyl-tRNA hydrolase [Streptomyces sp. AA4]
Length = 197
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 90/154 (58%), Gaps = 1/154 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A G A +G + A V+L KP+++MNLSG A ++K+P +
Sbjct: 35 VLDELAGRIGGKFKAHRSGAEVLEGRLAGARVVLVKPRSFMNLSGGPVVGAARFFKVPPS 94
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V+V HD++ + G L+L+ GG GHNGL+S+ + G R++ R+R GIGRPPG+ DP
Sbjct: 95 GVVVVHDELDVDFGALKLKLGGGDNGHNGLRSITKSL-GTRDYYRVRFGIGRPPGRQDPA 153
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 154
F+L+ F+ + R+ + + + + L+S+GL
Sbjct: 154 DFVLKDFSTVERKELPFEIDRCADATEALISRGL 187
>gi|229551615|ref|ZP_04440340.1| aminoacyl-tRNA hydrolase [Lactobacillus rhamnosus LMS2-1]
gi|258509517|ref|YP_003172268.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus GG]
gi|258540717|ref|YP_003175216.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus Lc 705]
gi|385829140|ref|YP_005866912.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus GG]
gi|385836346|ref|YP_005874121.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus ATCC 8530]
gi|229315019|gb|EEN80992.1| aminoacyl-tRNA hydrolase [Lactobacillus rhamnosus LMS2-1]
gi|257149444|emb|CAR88417.1| Peptidyl-tRNA hydrolase [Lactobacillus rhamnosus GG]
gi|257152393|emb|CAR91365.1| Peptidyl-tRNA hydrolase [Lactobacillus rhamnosus Lc 705]
gi|259650785|dbj|BAI42947.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus GG]
gi|355395838|gb|AER65268.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus ATCC 8530]
Length = 185
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 84/151 (55%), Gaps = 2/151 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A+ G+++N + A V D V L KPQTYMN SG + L YY++ L+
Sbjct: 25 VVDGLAQRMGLTLNKLEFDAATATTRVHDEKVFLVKPQTYMNASGRAVRQLMMYYQIRLD 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV HDDM L G LRLR G GGHNG+K +++ G+ EF RL+IGI P Q
Sbjct: 85 EILVVHDDMDLTLGKLRLRQRGSAGGHNGIKDIISA-TGSDEFYRLKIGIQHPQRQR-VV 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
++L F + ID A+ + + L+ L+
Sbjct: 143 DWVLTPFAKTDQPVIDAAITKADDALEDWLN 173
>gi|296125816|ref|YP_003633068.1| peptidyl-tRNA hydrolase [Brachyspira murdochii DSM 12563]
gi|296017632|gb|ADG70869.1| peptidyl-tRNA hydrolase [Brachyspira murdochii DSM 12563]
Length = 205
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 88/151 (58%), Gaps = 2/151 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID AE+ ++ +T K+ + +G D +L KPQT+MNLSGES ++ ++ + +
Sbjct: 27 LIDKIAENLSLNFDTNKKKSLYTRGKSKDIEYILLKPQTFMNLSGESAIYISKFFNVKTD 86
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DDM +P G +++ G GGHNG+KS++ + +F R+RIGIGRP
Sbjct: 87 DIIVIYDDMDIPFGTFKIKKGGSSGGHNGIKSLIAQLHSD-DFTRIRIGIGRPNAGKKVN 145
Query: 121 AFLLQKFNAIARERIDTALQEGV-EVLKLLL 150
++L F+ E ++T + + V E +K L
Sbjct: 146 DYVLSNFSKKEMEELNTVIADNVIEAVKTAL 176
>gi|94971564|ref|YP_593612.1| peptidyl-tRNA hydrolase [Candidatus Koribacter versatilis Ellin345]
gi|94553614|gb|ABF43538.1| peptidyl-tRNA hydrolase [Candidatus Koribacter versatilis Ellin345]
Length = 228
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 91/162 (56%), Gaps = 2/162 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D AE GI + +CKA G+G + V+LAKP+TYMNLSG S L + ++ +
Sbjct: 53 VDRIAEKYGIRVANRNCKALTGRGVIEGVDVVLAKPETYMNLSGASVQELVSELEIDGTK 112
Query: 62 -VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ LP G +R+R G GGHNG++S++ +EF R+RIGI D
Sbjct: 113 DMIVIYDDLDLPYGSIRVRERGSAGGHNGVQSIIGAL-DTQEFLRIRIGIAPEFKLSDGA 171
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+++L + +D AL + E +K++L +G + FN
Sbjct: 172 SYVLSQLKKSQLPVVDQALDDAAEAVKVILREGPGPAMNRFN 213
>gi|223933456|ref|ZP_03625441.1| Aminoacyl-tRNA hydrolase [Streptococcus suis 89/1591]
gi|302023114|ref|ZP_07248325.1| peptidyl-tRNA hydrolase [Streptococcus suis 05HAS68]
gi|330831856|ref|YP_004400681.1| peptidyl-tRNA hydrolase [Streptococcus suis ST3]
gi|386583134|ref|YP_006079537.1| peptidyl-tRNA hydrolase [Streptococcus suis D9]
gi|223897894|gb|EEF64270.1| Aminoacyl-tRNA hydrolase [Streptococcus suis 89/1591]
gi|329306079|gb|AEB80495.1| peptidyl-tRNA hydrolase [Streptococcus suis ST3]
gi|353735280|gb|AER16289.1| peptidyl-tRNA hydrolase [Streptococcus suis D9]
Length = 189
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 1 MIDAFAESQGISMNTVHCK---ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL 57
++D A+ + ++ N H K A G F+ + L KP T+MN SG++ L AYY L
Sbjct: 26 LLDKIAKRENVTFN--HDKIFQADIGTTFIDGEKIYLVKPTTFMNESGKAVHALMAYYGL 83
Query: 58 PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQM 117
+LV +DD+ + G +R R G GGHNG+KS++ + G +EF R++IGIGRP G+M
Sbjct: 84 DATDILVAYDDLDMAVGKIRFRQKGSAGGHNGIKSIVKHI-GTQEFDRIKIGIGRPKGKM 142
Query: 118 DPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA-RHFN 162
+L F+ R ID AL + + + + L + ++ R FN
Sbjct: 143 SVVNHVLSGFDTEDRIEIDLALDKLDKAVNVYLEEDDFDTVMRKFN 188
>gi|227873323|ref|ZP_03991585.1| aminoacyl-tRNA hydrolase [Oribacterium sinus F0268]
gi|227840838|gb|EEJ51206.1| aminoacyl-tRNA hydrolase [Oribacterium sinus F0268]
Length = 197
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 93/170 (54%), Gaps = 2/170 (1%)
Query: 1 MIDAFAESQG-ISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPL 59
+ID + G +S+ + + + + +G VLL KP TYMNLSGES PLA Y+K+P
Sbjct: 25 VIDVLCKELGNLSLESTKFRGAYTKTRIGSEEVLLLKPLTYMNLSGESIVPLAQYFKIPK 84
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
+LV D++ G +R+R G GGHNGLK+++ + + EF R+R+G+G + D
Sbjct: 85 EHILVLSDEISFAPGDIRIRKKGSAGGHNGLKNIIAHLH-SEEFPRIRLGVGAKGEKEDL 143
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKH 169
+L F+ + ++ A + + ++ KG+ ++ FN +K K
Sbjct: 144 AHHVLSPFSKAEQAEMEDAYERAAKACIAIVEKGIDQAMNEFNQKKKGKE 193
>gi|302388385|ref|YP_003824207.1| peptidyl-tRNA hydrolase [Clostridium saccharolyticum WM1]
gi|302199013|gb|ADL06584.1| peptidyl-tRNA hydrolase [Clostridium saccharolyticum WM1]
Length = 188
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 96/161 (59%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D A+ G + +A G G +G V+L+KPQT+MNLSGES +A +YK+ +
Sbjct: 26 VDILADKLGARVTEKKHRAFCGTGRIGPEKVILSKPQTFMNLSGESIRAMADFYKVEPDH 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+++ DD+ L G LR+R G GGHNGLK+++N+ G +EF+R+R+G+G P +MD
Sbjct: 86 IIIICDDINLAEGQLRIRTKGSAGGHNGLKNIINHL-GTQEFSRIRVGVGEKPKEMDLAD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F +D A Q+ E +++++G + FN
Sbjct: 145 YVLGRFPREQEGVMDQAYQDAAEAAIMMVTEGAEAAMNFFN 185
>gi|404417268|ref|ZP_10999071.1| peptidyl-tRNA hydrolase [Staphylococcus arlettae CVD059]
gi|403490366|gb|EJY95908.1| peptidyl-tRNA hydrolase [Staphylococcus arlettae CVD059]
Length = 190
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 87/167 (52%), Gaps = 6/167 (3%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID +++ K + +G V+ +P T MNLSGE+ PL YY + +
Sbjct: 25 VIDYMLAQHNFTLDKQKFKGAYTIERIGQEKVMFIEPLTMMNLSGEAVAPLMDYYNIEVE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ LP G +RLR G GGHNG+KS++ G +F R+RIG+ RP M
Sbjct: 85 DLIVLYDDLDLPQGEIRLRQKGSAGGHNGMKSIIQML-GTDQFKRIRIGVDRPSNGMAIV 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKY 167
++LQKF+ R +D + ++ + E++R N + +Y
Sbjct: 144 DYVLQKFSKTERVIMDKVIDHSARAVEAFI-----ETSRFDNVMNEY 185
>gi|331003612|ref|ZP_08327108.1| peptidyl-tRNA hydrolase [Lachnospiraceae oral taxon 107 str. F0167]
gi|330412332|gb|EGG91724.1| peptidyl-tRNA hydrolase [Lachnospiraceae oral taxon 107 str. F0167]
Length = 211
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 91/163 (55%), Gaps = 1/163 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+++ A G ++ K F + +G+ ++ +P TYMN SGES Y+K+ +
Sbjct: 46 VVEKLAYELGEDISERKYKGVFTRVRIGNEKAIILEPLTYMNNSGESVRAFMDYFKIDAS 105
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V+V +DD+ L G LR+R G GGHNG+KS++ + G +F R+++G+G P +MD
Sbjct: 106 DVIVIYDDINLEPGNLRIRLKGSAGGHNGIKSLIAHM-GTSDFPRIKVGVGEKPAKMDLA 164
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
+L +FN ++ +D A + +E +KL++ + +NT
Sbjct: 165 DHVLGRFNDTDKKLLDEAASDAIEAIKLMVEDQYDTAMNRYNT 207
>gi|227512316|ref|ZP_03942365.1| peptidyl-tRNA hydrolase [Lactobacillus buchneri ATCC 11577]
gi|227084491|gb|EEI19803.1| peptidyl-tRNA hydrolase [Lactobacillus buchneri ATCC 11577]
Length = 189
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 81/151 (53%), Gaps = 1/151 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+++ FA+ GIS+ A G FV VL+ +P T+MN SG + PL +Y+++
Sbjct: 28 VVEEFAKKHGISIKIRKMNAKMGSAFVNGQKVLVVEPTTFMNDSGIAVKPLMSYFEIENK 87
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V+V HDDM LP G +R++ G GGHNG+KS++NN G F+R+R+GI P
Sbjct: 88 DVIVVHDDMDLPIGKIRIKDKGSAGGHNGIKSLINNL-GTEHFSRIRVGIAHPDKNNTVV 146
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
++L +F+ A V L+ L
Sbjct: 147 NYVLGRFSKSQLPEFKIATDNAVNALEDWLD 177
>gi|167766178|ref|ZP_02438231.1| hypothetical protein CLOSS21_00672 [Clostridium sp. SS2/1]
gi|317499347|ref|ZP_07957617.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 5_1_63FAA]
gi|429762584|ref|ZP_19294972.1| aminoacyl-tRNA hydrolase [Anaerostipes hadrus DSM 3319]
gi|167712258|gb|EDS22837.1| aminoacyl-tRNA hydrolase [Clostridium sp. SS2/1]
gi|291560115|emb|CBL38915.1| peptidyl-tRNA hydrolase [butyrate-producing bacterium SSC/2]
gi|316893382|gb|EFV15594.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 5_1_63FAA]
gi|429181404|gb|EKY22567.1| aminoacyl-tRNA hydrolase [Anaerostipes hadrus DSM 3319]
Length = 188
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 98/165 (59%), Gaps = 9/165 (5%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D A+ +GIS+NT KA G G++G VLL KPQT+MNLSGES P+ +YKL
Sbjct: 26 LDYIADKEGISINTGKHKALIGTGYMGGEKVLLVKPQTFMNLSGESLRPIMDFYKLEPED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++ HDD+ L G LR+R G GGHNGLKS++++ G+ +F R++IG+G P D
Sbjct: 86 FIIIHDDIDLDVGRLRIRRKGSAGGHNGLKSIISHL-GSMDFPRVKIGVGEKPKGYDLAD 144
Query: 122 FLLQKFN----AIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F AI ER D E + ++L++ +TE+ N
Sbjct: 145 YVLGHFTKEEQAIFAERFD----EVYDAVQLIVMGDITEAMNRHN 185
>gi|227832719|ref|YP_002834426.1| peptidyl-tRNA hydrolase [Corynebacterium aurimucosum ATCC 700975]
gi|227453735|gb|ACP32488.1| Peptidyl-tRNA hydrolase [Corynebacterium aurimucosum ATCC 700975]
Length = 182
Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 79/123 (64%), Gaps = 2/123 (1%)
Query: 28 GDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGH 87
GDA V++AKP+++MNLSG LA Y+ +P + ++V HD++ L ++ R GG GH
Sbjct: 60 GDAKVIVAKPRSFMNLSGGPIKALAQYFNVPHDHIIVVHDELELDFATIKRRLGGGDHGH 119
Query: 88 NGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGV-EVL 146
NGL+S + G +++ RL +GIGRPPG+MDP AF+L+ +N + I + V E+L
Sbjct: 120 NGLRSTTKSL-GTKDYQRLSVGIGRPPGRMDPAAFVLKPWNKQEAQEIPIICADAVDEIL 178
Query: 147 KLL 149
+ L
Sbjct: 179 RAL 181
>gi|383639358|ref|ZP_09951764.1| peptidyl-tRNA hydrolase [Streptomyces chartreusis NRRL 12338]
Length = 200
Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 81/132 (61%), Gaps = 2/132 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V++AKP +YMNLSG L +YK+P+ V+ HD++ + G LRL+ GG GHNGLK
Sbjct: 71 VIVAKPMSYMNLSGGPVNALRDFYKVPVAHVVAIHDELDIDYGTLRLKLGGGDNGHNGLK 130
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ F ++ R+R GIGRPPG+M F+L+ F++ R+ +D + + ++ L+
Sbjct: 131 SMTKAF--GADYHRVRFGIGRPPGRMPVADFVLRDFSSAERKELDYFVDRAADAVECLVI 188
Query: 152 KGLTESARHFNT 163
+GL + +N+
Sbjct: 189 EGLERAQSTYNS 200
>gi|295108813|emb|CBL22766.1| peptidyl-tRNA hydrolase [Ruminococcus obeum A2-162]
Length = 192
Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 90/163 (55%), Gaps = 2/163 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PL 59
+ID E + V A +G+G +G PV+L KP +YMNLSG +A Y+K+ P
Sbjct: 25 VIDKLVEEYQVPQAGVKFNAMYGKGRIGGQPVILMKPLSYMNLSGGPIREMANYFKIDPE 84
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
++V +DD+ L G LR+R G GGHNG+K ++ G + F R+++G+G P D
Sbjct: 85 TEMIVVYDDIDLDPGQLRIRKKGSAGGHNGIKHIIQQL-GTQNFVRIKVGVGAKPKGWDL 143
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F+ R I+ A + + ++L+L+ + + +N
Sbjct: 144 ADYVLGRFDKEDRALIEEAQERACKAVELILTDSVDAAMNEYN 186
>gi|262182792|ref|ZP_06042213.1| peptidyl-tRNA hydrolase [Corynebacterium aurimucosum ATCC 700975]
Length = 179
Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 79/123 (64%), Gaps = 2/123 (1%)
Query: 28 GDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGH 87
GDA V++AKP+++MNLSG LA Y+ +P + ++V HD++ L ++ R GG GH
Sbjct: 57 GDAKVIVAKPRSFMNLSGGPIKALAQYFNVPHDHIIVVHDELELDFATIKRRLGGGDHGH 116
Query: 88 NGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGV-EVL 146
NGL+S + G +++ RL +GIGRPPG+MDP AF+L+ +N + I + V E+L
Sbjct: 117 NGLRSTTKSL-GTKDYQRLSVGIGRPPGRMDPAAFVLKPWNKQEAQEIPIICADAVDEIL 175
Query: 147 KLL 149
+ L
Sbjct: 176 RAL 178
>gi|313112803|ref|ZP_07798450.1| peptidyl-tRNA hydrolase [Faecalibacterium cf. prausnitzii KLE1255]
gi|310624873|gb|EFQ08181.1| peptidyl-tRNA hydrolase [Faecalibacterium cf. prausnitzii KLE1255]
Length = 192
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 91/162 (56%), Gaps = 2/162 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D A+ GIS++ + +GQG V V+L KP TYMNLSG+S P A ++K+P +
Sbjct: 31 LDYLADKWGISVSKTKFEGLWGQGEVDGHKVVLLKPLTYMNLSGDSIAPTAGFFKIPADH 90
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIG-RPPGQMDPK 120
V+V DD+ G LR+R +G GGHNGLKS++ G F R+RIG+G +P D
Sbjct: 91 VIVLCDDITQSPGKLRIRPSGSAGGHNGLKSIIARL-GGENFPRIRIGVGAKPHPDYDLA 149
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
A++L KF A + + + KL++ L+ + +N
Sbjct: 150 AWVLGKFPAEDAKALSGRYPDLEAAAKLIMDGKLSLAQSKYN 191
>gi|268608428|ref|ZP_06142155.1| peptidyl-tRNA hydrolase [Ruminococcus flavefaciens FD-1]
Length = 208
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 89/164 (54%), Gaps = 2/164 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A G +N + K + +GD LL KP TYMN SGES +YK+ ++
Sbjct: 46 VLDMLASQLGEEINRLRFKGKTAEVMIGDKRCLLLKPTTYMNNSGESIVQALEFYKIDVD 105
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPG-QMDP 119
++V DD+ L G LR+R G HGGHNGL+S+ + G ++ R+++G+G+ P D
Sbjct: 106 HLIVVCDDISLDAGKLRIRRKGSHGGHNGLRSIC-DLTGRDDYQRIKMGVGKKPHPDYDL 164
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L KF E++ + + E LKL++ E+ +N+
Sbjct: 165 AKWVLGKFGKEDAEKMKQSAENACECLKLMVQGKTDEAMNKYNS 208
>gi|119390906|sp|Q1IHW2.2|PTH_ACIBL RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
Length = 201
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 91/162 (56%), Gaps = 2/162 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D AE GI + +CKA G+G + V+LAKP+TYMNLSG S L + ++ +
Sbjct: 26 VDRIAEKYGIRVANRNCKALTGRGVIEGVDVVLAKPETYMNLSGASVQELVSELEIDGTK 85
Query: 62 -VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ LP G +R+R G GGHNG++S++ +EF R+RIGI D
Sbjct: 86 DMIVIYDDLDLPYGSIRVRERGSAGGHNGVQSIIGALD-TQEFLRIRIGIAPEFKLSDGA 144
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+++L + +D AL + E +K++L +G + FN
Sbjct: 145 SYVLSQLKKSQLPVVDQALDDAAEAVKVILREGPGPAMNRFN 186
>gi|328956570|ref|YP_004373956.1| peptidyl-tRNA hydrolase [Carnobacterium sp. 17-4]
gi|328672894|gb|AEB28940.1| peptidyl-tRNA hydrolase [Carnobacterium sp. 17-4]
Length = 191
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 81/150 (54%), Gaps = 1/150 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D FA + + +A + + FVG VLL KPQT+MN SG + L Y+ + +
Sbjct: 26 VDEFAIQHKMEFSKTKFEALYAEAFVGTEKVLLVKPQTFMNDSGRAVRQLMDYFNVEVED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DD+ LP G LRLR G GGHNG+KS++ + +F R+RIGI RP G+
Sbjct: 86 LVVIYDDLDLPVGKLRLRQKGSAGGHNGIKSIIQHI-DTSDFNRIRIGIDRPMGKQTVIQ 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLS 151
+L F+ E + +++ V L +
Sbjct: 145 HVLSGFHKSQHEELLITIKDSVAALDYWIE 174
>gi|295104238|emb|CBL01782.1| peptidyl-tRNA hydrolase [Faecalibacterium prausnitzii SL3/3]
Length = 192
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 78/127 (61%), Gaps = 2/127 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+DA A+ IS+ + +GQG V V+L KP TYMNLSG+S P+A ++K+P +
Sbjct: 31 LDALADKWNISVGKTKFQGLWGQGEVNGHKVVLLKPLTYMNLSGDSIAPMAGFFKIPADH 90
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIG-RPPGQMDPK 120
VLV DD+ G LR+R +G GGHNGLKS++ G F R+RIGIG +P D
Sbjct: 91 VLVLCDDITQAPGKLRIRPSGSAGGHNGLKSIIARL-GGENFPRIRIGIGAKPHPDYDLA 149
Query: 121 AFLLQKF 127
A++L KF
Sbjct: 150 AWVLGKF 156
>gi|160944869|ref|ZP_02092096.1| hypothetical protein FAEPRAM212_02385 [Faecalibacterium prausnitzii
M21/2]
gi|158444053|gb|EDP21057.1| aminoacyl-tRNA hydrolase [Faecalibacterium prausnitzii M21/2]
Length = 206
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 78/127 (61%), Gaps = 2/127 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+DA A+ IS+ + +GQG V V+L KP TYMNLSG+S P+A ++K+P +
Sbjct: 45 LDALADKWNISVGKTKFQGLWGQGEVNGHKVVLLKPLTYMNLSGDSIAPMAGFFKIPADH 104
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIG-RPPGQMDPK 120
VLV DD+ G LR+R +G GGHNGLKS++ G F R+RIGIG +P D
Sbjct: 105 VLVLCDDITQAPGKLRIRPSGSAGGHNGLKSIIARL-GGENFPRIRIGIGAKPHPDYDLA 163
Query: 121 AFLLQKF 127
A++L KF
Sbjct: 164 AWVLGKF 170
>gi|148655155|ref|YP_001275360.1| peptidyl-tRNA hydrolase [Roseiflexus sp. RS-1]
gi|166229447|sp|A5US07.1|PTH_ROSS1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|148567265|gb|ABQ89410.1| peptidyl-tRNA hydrolase [Roseiflexus sp. RS-1]
Length = 217
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 88/163 (53%), Gaps = 2/163 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PL 59
++ A+ + A +G + V LA PQTYMNLSG++ L +YK+ P
Sbjct: 25 VVSELAQRHRLEFTHKRAHARIAEGIIAGQRVALALPQTYMNLSGQAVVGLRQWYKIDPA 84
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
+LV +DD+ LP GVLRLR G G HNG++S++ G++ F RLRIGI RPP D
Sbjct: 85 TELLVVYDDVDLPFGVLRLRERGSAGTHNGMRSII-TLLGSQVFPRLRIGIDRPPPAWDL 143
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F ++ +Q+ + L+ ++ +G+ + N
Sbjct: 144 ADYVLGRFTPEQEAQLPDIMQKAADALETVVREGMAVAMNRIN 186
>gi|352518631|ref|YP_004887948.1| peptidyl-tRNA hydrolase [Tetragenococcus halophilus NBRC 12172]
gi|348602738|dbj|BAK95784.1| peptidyl-tRNA hydrolase [Tetragenococcus halophilus NBRC 12172]
Length = 186
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 89/165 (53%), Gaps = 8/165 (4%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
++ A++ ++ +A FV +LL KPQTYMN SG + GPL Y+ +
Sbjct: 26 VERLAKTHEVTFKKNPFEAEVADFFVNGEKILLVKPQTYMNDSGRAVGPLMTYFGIYKEE 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V HDD+ L G +RLR G GGHNG+KS++++ G+ EF RL+IGIG P
Sbjct: 86 LIVVHDDLDLTVGKIRLRQKGSAGGHNGIKSIISHL-GSNEFGRLKIGIGHPQEHTTVVN 144
Query: 122 FLLQKFN----AIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+LQ FN A+ E ID A +E ++ + + T+ FN
Sbjct: 145 HVLQPFNKQQQAVMTESIDKA-KEAIDY--FIETNNFTQVMNRFN 186
>gi|225568649|ref|ZP_03777674.1| hypothetical protein CLOHYLEM_04727 [Clostridium hylemonae DSM
15053]
gi|225162577|gb|EEG75196.1| hypothetical protein CLOHYLEM_04727 [Clostridium hylemonae DSM
15053]
Length = 194
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 94/163 (57%), Gaps = 2/163 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PL 59
+ID A IS++ +A G+G + VLLAKPQTYMNLSGES L YYK+
Sbjct: 25 VIDTVARKYNISVDYRKNRAYIGKGIIAGQKVLLAKPQTYMNLSGESIRGLVDYYKVDEE 84
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
+++LV +DD+ L G LR+R G GGHNG+KS+++ G F R+++G+G P + D
Sbjct: 85 SQLLVIYDDVSLGAGQLRIRKKGSAGGHNGIKSIISCL-GTDIFPRIKVGVGEKPKRYDL 143
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F+ RE ++ E ++++++ + + +N
Sbjct: 144 ADYVLGHFSREEREMMEEGYGHAAEAVEMIVAGEIDAAMNEYN 186
>gi|340357160|ref|ZP_08679785.1| aminoacyl-tRNA hydrolase [Sporosarcina newyorkensis 2681]
gi|339618569|gb|EGQ23165.1| aminoacyl-tRNA hydrolase [Sporosarcina newyorkensis 2681]
Length = 207
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 77/131 (58%), Gaps = 1/131 (0%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+L KP TYMNLSGE PLA ++++ ++V +DD+ LP G +RLR G GGHNG+K
Sbjct: 76 VILLKPMTYMNLSGECVRPLADFFEVNDEEIVVLYDDLDLPVGKIRLRQKGSAGGHNGMK 135
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S++ + G EF R+RIG+ RP G M ++L F+A + I+ A+Q+ + +
Sbjct: 136 SLIAHL-GTTEFNRIRIGVDRPSGGMKVSDYVLAPFSADEQPLIEEAVQKSADACEEWQK 194
Query: 152 KGLTESARHFN 162
E FN
Sbjct: 195 TPFIEVMNKFN 205
>gi|89892925|ref|YP_516412.1| peptidyl-tRNA hydrolase [Desulfitobacterium hafniense Y51]
gi|89332373|dbj|BAE81968.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 196
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 86/162 (53%), Gaps = 2/162 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D AE + + + +G V L KPQT+MNLSG S LA +YK+
Sbjct: 36 LLDCLAEELKLDFRP-KFQGLVAETMMGGEKVYLLKPQTFMNLSGRSIRELAQFYKIAPK 94
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DDM LP G LRLR +G GGHNG+KS + G +F RL++GIGRP D
Sbjct: 95 DIMVVYDDMDLPIGRLRLRSSGSAGGHNGIKSTIAEL-GTEDFWRLKVGIGRPTAGWDSA 153
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F ++ L +G++ + L +G ++ +N
Sbjct: 154 RYVLASFTKEELPVLEEILDKGIKAVTLWAKEGGDKAMNLYN 195
>gi|56961863|ref|YP_173585.1| peptidyl-tRNA hydrolase [Bacillus clausii KSM-K16]
gi|68052898|sp|Q5WAD6.1|PTH_BACSK RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|56908097|dbj|BAD62624.1| peptidyl-tRNA hydrolase stage V sporulation protein C [Bacillus
clausii KSM-K16]
Length = 185
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 89/162 (54%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ + ++ KA +G+ +G V+L KP TYMNLSGE+ P Y+ + +
Sbjct: 25 IIDRCAQKLDLPLDKQKFKAIYGEKRIGSEKVVLLKPLTYMNLSGEAVRPFMDYFNISND 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ LP G +RLR G GGHNG+KS++ + G +F R+R+GIGRP
Sbjct: 85 ELVVIYDDLDLPVGKIRLRKKGSAGGHNGIKSLIAHL-GTEDFNRIRVGIGRPAHGEPVV 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L + ++ A ++ + ++ L K E FN
Sbjct: 144 HYVLDTYRKEELAFMNEAAEKSAKAIEAWLEKPFLEVMNTFN 185
>gi|317057761|ref|YP_004106228.1| peptidyl-tRNA hydrolase [Ruminococcus albus 7]
gi|315450030|gb|ADU23594.1| peptidyl-tRNA hydrolase [Ruminococcus albus 7]
Length = 208
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 89/163 (54%), Gaps = 2/163 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
I+A + G S + KA G +G L+ KP+T+MNLSG++ +YK+PL
Sbjct: 47 IEALEKKLGFSCDRHKFKAKVGNTVIGGKSCLVMKPETFMNLSGDAVSEAMDFYKIPLEN 106
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPG-QMDPK 120
V+V DD+ L G +R+R G GGHNG+KS++ G +F R+++G+G+ P D
Sbjct: 107 VIVIFDDISLDVGHMRIRRKGSAGGHNGIKSIIAQC-GGEDFPRIKLGVGKKPNPAYDLA 165
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L KF E++ A + + L+L++ + E+ +N
Sbjct: 166 KWVLSKFGDEDMEKLGNAADKACDALELMVQGKIDEAMNKYNA 208
>gi|219666189|ref|YP_002456624.1| peptidyl-tRNA hydrolase [Desulfitobacterium hafniense DCB-2]
gi|423075769|ref|ZP_17064483.1| aminoacyl-tRNA hydrolase [Desulfitobacterium hafniense DP7]
gi|119390936|sp|Q251S4.2|PTH_DESHY RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783865|sp|B8FZA5.1|PTH_DESHD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|219536449|gb|ACL18188.1| Aminoacyl-tRNA hydrolase [Desulfitobacterium hafniense DCB-2]
gi|361853181|gb|EHL05362.1| aminoacyl-tRNA hydrolase [Desulfitobacterium hafniense DP7]
Length = 185
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 86/162 (53%), Gaps = 2/162 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D AE + + + +G V L KPQT+MNLSG S LA +YK+
Sbjct: 25 LLDCLAEELKLDFRP-KFQGLVAETMMGGEKVYLLKPQTFMNLSGRSIRELAQFYKIAPK 83
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DDM LP G LRLR +G GGHNG+KS + G +F RL++GIGRP D
Sbjct: 84 DIMVVYDDMDLPIGRLRLRSSGSAGGHNGIKSTIAEL-GTEDFWRLKVGIGRPTAGWDSA 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F ++ L +G++ + L +G ++ +N
Sbjct: 143 RYVLASFTKEELPVLEEILDKGIKAVTLWAKEGGDKAMNLYN 184
>gi|239825632|ref|YP_002948256.1| peptidyl-tRNA hydrolase [Geobacillus sp. WCH70]
gi|259535195|sp|C5D374.1|PTH_GEOSW RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|239805925|gb|ACS22990.1| peptidyl-tRNA hydrolase [Geobacillus sp. WCH70]
Length = 186
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 83/162 (51%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ IS T + V L KP TYMNLSGE PL YY + ++
Sbjct: 25 VIDELAKRWNISFQTTKFHGMMASTVIFGEKVALCKPLTYMNLSGECVRPLMDYYHIDVD 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V+V +DD+ LP G +RLR G GGHNG+KS++++ G +EF R+RIGIGRP
Sbjct: 85 DVIVIYDDLDLPPGKIRLRMKGSSGGHNGIKSLIHHL-GTQEFKRVRIGIGRPANGQKIT 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F + + A+ + + + + FN
Sbjct: 144 DYVLGRFTKEESDAVMEAILRAADACEKAVVTPFLQVMNEFN 185
>gi|373495518|ref|ZP_09586101.1| peptidyl-tRNA hydrolase [Eubacterium infirmum F0142]
gi|371964655|gb|EHO82166.1| peptidyl-tRNA hydrolase [Eubacterium infirmum F0142]
Length = 190
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 94/165 (56%), Gaps = 6/165 (3%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A +S++ K+ G+ +G V+L KPQTYMNLSGE+ +YK+ L
Sbjct: 25 VIDELARRNSVSVDKSKFKSLTGEFKLGGEKVILMKPQTYMNLSGEAIREAVNFYKIDLK 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIG--RPPGQMD 118
+LV +DD+ +P G LR+R +G G HNG+KSV++ G+R+F R+RIGIG + +D
Sbjct: 85 NLLVIYDDLDIPMGALRIRTSGSSGTHNGMKSVVSQL-GSRDFPRVRIGIGSNKDDNLID 143
Query: 119 PKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
F++ K + + + E ++ ++ G+ ++ FN+
Sbjct: 144 ---FVIGKPSKSEEAVLSDTVSEAAHAVECYIADGIDKAMNRFNS 185
>gi|363897751|ref|ZP_09324289.1| peptidyl-tRNA hydrolase [Oribacterium sp. ACB7]
gi|361958216|gb|EHL11518.1| peptidyl-tRNA hydrolase [Oribacterium sp. ACB7]
Length = 189
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 92/165 (55%), Gaps = 6/165 (3%)
Query: 1 MIDAFAE---SQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL 57
+IDA E +G+ H F + +G V++ KP TYMNLSG+S P+ +YK+
Sbjct: 25 VIDALLEMLGGKGLESTKFH--GAFTKLRIGTEEVVILKPLTYMNLSGDSIAPMVNFYKI 82
Query: 58 PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQM 117
P +VLV D++ L G +R+R G GGHNGLKS++ G +F R+R+G+G +
Sbjct: 83 PAEQVLVISDEISLSPGSIRIRKKGSAGGHNGLKSIIARL-GTEDFPRIRLGVGEKKERE 141
Query: 118 DPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
D A +L +F +R++ A E + ++++G+ ++ +N
Sbjct: 142 DLAAHVLGRFEKEDEKRMEEAYTEAAKACICIVTEGIEKAMNLYN 186
>gi|147791610|emb|CAN77398.1| hypothetical protein VITISV_043931 [Vitis vinifera]
Length = 301
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 70/116 (60%), Gaps = 23/116 (19%)
Query: 25 GFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGH 84
G +G+ P+LLAKPQ YMN SGES +D+M LP GVLRL GGH
Sbjct: 78 GSIGEVPILLAKPQAYMNFSGESV-----------------YDEMNLPNGVLRLAPRGGH 120
Query: 85 GGHNG------LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARER 134
G HNG LK+VM + G REF RL IGIG PPG MD KA+LLQKF+ R++
Sbjct: 121 GYHNGYIYNNTLKNVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQKFSFEERKQ 176
>gi|295106616|emb|CBL04159.1| peptidyl-tRNA hydrolase [Gordonibacter pamelaeae 7-10-1-b]
Length = 185
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 88/161 (54%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+DA A G C + +G D ++LAKPQ+YMN SG L Y +
Sbjct: 26 VDAIAGEVGARYWKTECGSLTAKGAYRDVDLVLAKPQSYMNTSGGPVKQLMNAYGVDAEH 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V HD++ + G +R++ GGH GHNGL+S+ + G R+++R+R+GIGRPPG+M
Sbjct: 86 LIVIHDELDIDPGTVRVKFGGGHAGHNGLRSICDKL-GTRDWSRVRVGIGRPPGRMPVVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L A + A+ G + L++ GL ++ + +N
Sbjct: 145 WVLSLPKKEAADDFAYAVDRGAQAALSLVTAGLEKTQQAYN 185
>gi|205371996|ref|ZP_03224814.1| peptidyl-tRNA hydrolase [Bacillus coahuilensis m4-4]
Length = 185
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 87/162 (53%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ ++++ K + +L KP TYMNLSGES PL YY + +
Sbjct: 25 VIDELAKRFNVALDQSKFKGVYSIVRHEGEKFILLKPLTYMNLSGESIRPLMDYYDIDIE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ LP G LRLR G GGHNG+KS + + G+++F R+R+G+ RPP M
Sbjct: 85 DLVVIYDDLDLPVGKLRLRQKGSAGGHNGMKSTIAHL-GSQQFNRIRLGVDRPPSGMTVP 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L KF A + ++ ++ + + L + FN
Sbjct: 144 NYVLGKFTASEQPLVEEVVKASADACEAWLKEPFLSVMNKFN 185
>gi|335049997|ref|ZP_08542978.1| aminoacyl-tRNA hydrolase [Megasphaera sp. UPII 199-6]
gi|333761904|gb|EGL39430.1| aminoacyl-tRNA hydrolase [Megasphaera sp. UPII 199-6]
Length = 190
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 79/165 (47%), Gaps = 2/165 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+DA A G A +LL KPQTYMN SG + GPL +YKL +
Sbjct: 26 VDALAADMGADRWQQKMAALVASVSFRGETILLVKPQTYMNDSGRAVGPLMRWYKLAEPQ 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
V + +DDM LP G LR+R +G GGHNG+KS+ N G EF R RIGIGRP Q
Sbjct: 86 VYIVYDDMDLPVGRLRIRKSGSDGGHNGIKSIFAN--GCTEFIRFRIGIGRPLPQWSVVD 143
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 166
+L F + V +K L G+ + FN +K
Sbjct: 144 HVLAPFTPDVLPAFQEGVAAAVAAIKGCLELGVDKGMNRFNPKKK 188
>gi|379745757|ref|YP_005336578.1| peptidyl-tRNA hydrolase [Mycobacterium intracellulare ATCC 13950]
gi|379753049|ref|YP_005341721.1| peptidyl-tRNA hydrolase [Mycobacterium intracellulare MOTT-02]
gi|379760484|ref|YP_005346881.1| peptidyl-tRNA hydrolase [Mycobacterium intracellulare MOTT-64]
gi|387874437|ref|YP_006304741.1| peptidyl-tRNA hydrolase [Mycobacterium sp. MOTT36Y]
gi|406029370|ref|YP_006728261.1| peptidyl-tRNA hydrolase [Mycobacterium indicus pranii MTCC 9506]
gi|443304369|ref|ZP_21034157.1| peptidyl-tRNA hydrolase [Mycobacterium sp. H4Y]
gi|378798121|gb|AFC42257.1| peptidyl-tRNA hydrolase [Mycobacterium intracellulare ATCC 13950]
gi|378803265|gb|AFC47400.1| peptidyl-tRNA hydrolase [Mycobacterium intracellulare MOTT-02]
gi|378808426|gb|AFC52560.1| peptidyl-tRNA hydrolase [Mycobacterium intracellulare MOTT-64]
gi|386787895|gb|AFJ34014.1| peptidyl-tRNA hydrolase [Mycobacterium sp. MOTT36Y]
gi|405127917|gb|AFS13172.1| peptidyl-tRNA hydrolase [Mycobacterium indicus pranii MTCC 9506]
gi|442765933|gb|ELR83927.1| peptidyl-tRNA hydrolase [Mycobacterium sp. H4Y]
Length = 191
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 83/123 (67%), Gaps = 1/123 (0%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V++AKP+ YMN SG GPLA +Y + ++V HDD+ L G +RL+ GG GGHNGL+
Sbjct: 60 VVVAKPRCYMNESGRQVGPLAKFYSVTPGDIIVIHDDLDLDFGRIRLKIGGGEGGHNGLR 119
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ N G+++F R+RIGIGRPPG+ DP AF+L+ FNA R + T ++ + +LL+
Sbjct: 120 SLANAL-GSKDFQRVRIGIGRPPGRKDPAAFVLENFNAAERTEVPTICEQAADATELLIE 178
Query: 152 KGL 154
GL
Sbjct: 179 LGL 181
>gi|290967809|ref|ZP_06559362.1| aminoacyl-tRNA hydrolase [Megasphaera genomosp. type_1 str. 28L]
gi|290782168|gb|EFD94743.1| aminoacyl-tRNA hydrolase [Megasphaera genomosp. type_1 str. 28L]
Length = 188
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 79/165 (47%), Gaps = 2/165 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+DA A G A +LL KPQTYMN SG + GPL +YKL +
Sbjct: 24 VDALAADMGADRWQQKMAALVASVSFRGETILLVKPQTYMNDSGRAVGPLMRWYKLAEPQ 83
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
V + +DDM LP G LR+R +G GGHNG+KS+ N G EF R RIGIGRP Q
Sbjct: 84 VYIVYDDMDLPVGRLRIRKSGSDGGHNGIKSIFAN--GCTEFIRFRIGIGRPLPQWSVVD 141
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 166
+L F + V +K L G+ + FN +K
Sbjct: 142 HVLAPFTPDVLPAFQEGVAAAVAAIKGCLELGVDKGMNRFNPKKK 186
>gi|227497784|ref|ZP_03927970.1| aminoacyl-tRNA hydrolase [Actinomyces urogenitalis DSM 15434]
gi|226832784|gb|EEH65167.1| aminoacyl-tRNA hydrolase [Actinomyces urogenitalis DSM 15434]
Length = 198
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 98/171 (57%), Gaps = 9/171 (5%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAP-------VLLAKPQTYMNLSGESTGPLAA 53
+ID A G ++ +A + +G AP V+LA+P T+MNLSG T LA
Sbjct: 28 VIDVLAGRAGSRLSKHKARAQVAEVRLGMAPGGAPGPRVILAEPATFMNLSGGPTAALAK 87
Query: 54 YYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGR 112
+Y + P +LV HD++ LP LRL+ GG GGHNGL+S+ G+R +ARLR+GIGR
Sbjct: 88 FYGIDPATNLLVIHDELDLPAHTLRLKRGGGEGGHNGLRSISQAV-GSRNYARLRVGIGR 146
Query: 113 PPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
PPG+ DP F+L F A R +D L+ + ++ ++S G + + N+
Sbjct: 147 PPGRQDPADFVLSDFPARERAELDVTLELAADAVEAVVSAGFEAAQQQVNS 197
>gi|257792490|ref|YP_003183096.1| peptidyl-tRNA hydrolase [Eggerthella lenta DSM 2243]
gi|257476387|gb|ACV56707.1| peptidyl-tRNA hydrolase [Eggerthella lenta DSM 2243]
Length = 185
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 86/161 (53%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D AE G C A +G D ++LAKPQ+YMN SG L Y +
Sbjct: 26 VDLIAEEVGARYWKTECGALTAKGAYRDHDLVLAKPQSYMNTSGGPVKQLMNAYGVDAEH 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V HD++ + G +R++ GGH GHNGL+++ + G R++ R+R+GIGRPPG+M
Sbjct: 86 LIVVHDELDIDPGTVRVKFGGGHAGHNGLRAICDKL-GTRDWHRVRVGIGRPPGRMPVVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L K A + A G + L+ GL ++ + FN
Sbjct: 145 WVLSKPKKDAADDFVQATDRGAQAALSLVQVGLEKTQQAFN 185
>gi|430751827|ref|YP_007214735.1| peptidyl-tRNA hydrolase [Thermobacillus composti KWC4]
gi|430735792|gb|AGA59737.1| peptidyl-tRNA hydrolase [Thermobacillus composti KWC4]
Length = 186
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 87/162 (53%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A IS+ KA G+G V V L KP TYMNLSGES +YK +
Sbjct: 25 VIDELARRWNISVTQSKFKALVGEGHVKGEKVHLLKPMTYMNLSGESLRAFLDFYKADIA 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ P G +RLR+ G GGHNG++S++ + G ++F R+R+GI RP +
Sbjct: 85 DLIVVYDDLDTPLGKIRLRYQGSSGGHNGVRSIIQHL-GTQQFNRIRMGISRPAPGREIV 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F+ E++ T + + ++ L ++ FN
Sbjct: 144 DYVLSPFDKAEAEQLKTMIAAACDAVEYALEHPFEKAMAKFN 185
>gi|343468473|gb|AEM43532.1| peptidyl-tRNA hydrolase [Streptomyces chattanoogensis]
Length = 167
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 93/168 (55%), Gaps = 7/168 (4%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVG-----DAPVLLAKPQTYMNLSGESTGPLAAYY 55
+ D AE G +A +G +G V++AKP ++MNLSG T L +Y
Sbjct: 2 VADLLAERVGGRFKAHKARAQVVEGRIGVPGPGSRRVVVAKPMSFMNLSGGPTTALRDFY 61
Query: 56 KLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPG 115
K+P++ ++ HD++ + G LRL+ GG GHNGLKS+ + E+ R+R GIGRPPG
Sbjct: 62 KVPVSHIVAVHDELDIDYGALRLKLGGGDNGHNGLKSITKSL--GAEYHRVRFGIGRPPG 119
Query: 116 QMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
+M F+L+ F++ R+ +D + + ++ L+ GL + +N+
Sbjct: 120 RMPVADFVLKDFSSGERKELDYFVDRAADAVEALVVDGLERAQGTYNS 167
>gi|254821213|ref|ZP_05226214.1| peptidyl-tRNA hydrolase [Mycobacterium intracellulare ATCC 13950]
Length = 191
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 83/123 (67%), Gaps = 1/123 (0%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V++AKP+ YMN SG GPLA +Y + ++V HDD+ L G +RL+ GG GGHNGL+
Sbjct: 60 VVVAKPRCYMNESGRQVGPLAKFYSVTPGDIIVIHDDLDLDFGRIRLKIGGGEGGHNGLR 119
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ N G+++F R+RIGIGRPPG+ DP AF+L+ FNA R + T ++ + +LL+
Sbjct: 120 SLANAL-GSKDFQRVRIGIGRPPGRKDPAAFVLENFNAAERTEVPTICEQAADATELLIE 178
Query: 152 KGL 154
GL
Sbjct: 179 LGL 181
>gi|212703169|ref|ZP_03311297.1| hypothetical protein DESPIG_01210 [Desulfovibrio piger ATCC 29098]
gi|212673435|gb|EEB33918.1| aminoacyl-tRNA hydrolase [Desulfovibrio piger ATCC 29098]
Length = 197
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 84/135 (62%), Gaps = 3/135 (2%)
Query: 25 GFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGH 84
G GD L A PQT+MNLSG+ PL A++K+ ++++V HD++ +P G LR + GG+
Sbjct: 62 GLPGD--WLAAMPQTFMNLSGQCVQPLLAWHKIRPDQLVVVHDELDIPAGELRFKKGGGN 119
Query: 85 GGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVE 144
GHNGLKS+ +F RLRIGIGRPP + D ++L + + ++I TA + +E
Sbjct: 120 AGHNGLKSITQML-ATPDFYRLRIGIGRPPQKGDVINWVLGRPCSEDADKIRTATDKALE 178
Query: 145 VLKLLLSKGLTESAR 159
VL++ KGL + R
Sbjct: 179 VLEIFAKKGLEAAVR 193
>gi|91204544|emb|CAJ70772.1| similar to peptidyl-tRNA hydrolase [Candidatus Kuenenia
stuttgartiensis]
Length = 186
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 90/164 (54%), Gaps = 6/164 (3%)
Query: 1 MIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLP 58
+ID F SQ + M V K + F + V ++L KPQT+MNLSG + +A YK
Sbjct: 27 VIDEF--SQQLEMGGVQHKFQSLFCKKEVEHEEIILLKPQTFMNLSGIAVQEVANMYKCQ 84
Query: 59 LNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMD 118
V+V DD+ LP G LR+R +GG GGH GL+SV ++ G +F RLRIGIGRP D
Sbjct: 85 PRDVMVVCDDLDLPLGKLRIRRSGGCGGHRGLESVASSL-GTADFPRLRIGIGRPKFN-D 142
Query: 119 PKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
F+L F+A I +LQE + LK + KG+ N
Sbjct: 143 TSRFVLSMFSAEEDVEIAKSLQEACKALKTWVYKGIESCMNENN 186
>gi|374992834|ref|YP_004968333.1| peptidyl-tRNA hydrolase [Desulfosporosinus orientis DSM 765]
gi|357211200|gb|AET65818.1| peptidyl-tRNA hydrolase [Desulfosporosinus orientis DSM 765]
Length = 185
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 85/158 (53%), Gaps = 3/158 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D AE + + + +G + + L KPQT+MNLSG S L+ +YKL
Sbjct: 25 LVDLLAEVHKLQFRS-KFQGLLAEGNIEGERLFLLKPQTFMNLSGRSVSELSRFYKLSQE 83
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV DDM LP G +RLR +G GGHNG+KS+ G+ RL++G+GRPP + DP
Sbjct: 84 DLLVVQDDMDLPLGKIRLRDHGSSGGHNGIKSIQFEL-GSERLWRLKLGVGRPPKEWDPA 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 158
++L F + +D L + + L + KG E A
Sbjct: 143 RYVLSPFAEDETKLLDDVLGRAEKAVYLWI-KGEYERA 179
>gi|383767710|ref|YP_005446692.1| peptidyl-tRNA hydrolase [Phycisphaera mikurensis NBRC 102666]
gi|381387979|dbj|BAM04795.1| peptidyl-tRNA hydrolase [Phycisphaera mikurensis NBRC 102666]
Length = 191
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 91/166 (54%), Gaps = 6/166 (3%)
Query: 1 MIDAFAESQGIS--MNTVHCKATFGQGFVGDAP--VLLAKPQTYMNLSGESTGPLAAYYK 56
+++ FA G++ H G VG AP +LL +P TYMN SG+S +YK
Sbjct: 25 VLERFATRHGLAGPRQRFHAGTIDGSVTVGGAPHKLLLVQPLTYMNRSGQSVREAVDFYK 84
Query: 57 LPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQ 116
+ + VL+ DD+ CG LRL+ G GGHNGLK V G R +ARLRIGI PG+
Sbjct: 85 VAVKDVLIVVDDIAFGCGDLRLKAMGSAGGHNGLKDV-ERVLGTRAYARLRIGID-APGR 142
Query: 117 MDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+ ++L +F A RER+D AL E + ++ L+ G+ ++ N
Sbjct: 143 IPQVDYVLGRFTADQRERLDPALDEACQAVEAWLTLGIEKAMNKVN 188
>gi|186684439|ref|YP_001867635.1| peptidyl-tRNA hydrolase [Nostoc punctiforme PCC 73102]
gi|238689436|sp|B2JA15.1|PTH_NOSP7 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|186466891|gb|ACC82692.1| peptidyl-tRNA hydrolase [Nostoc punctiforme PCC 73102]
Length = 213
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 96/169 (56%), Gaps = 8/169 (4%)
Query: 2 IDAFAESQGISM-NTVHCKATFGQGFV-GDAPVLLAKPQTYMNLSGESTGPLAAYYKLPL 59
++A + S IS+ + +G+G G + L KP TYMN SG+S + ++YKLP
Sbjct: 38 VEALSRSWRISLAENRKFQGEYGEGMAPGGGKIRLLKPLTYMNRSGQSIQAVTSWYKLPP 97
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
VL+ +DDM LP G RLR +G GGHNG+KS + + + F RLRIGIG+P G D
Sbjct: 98 ESVLIIYDDMDLPLGKTRLRLSGSAGGHNGMKSAIAHL-STQNFPRLRIGIGKPKGAADN 156
Query: 120 K-----AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
+ +L +F++ +++ LQ VE ++L L +G+ ++ N+
Sbjct: 157 DDSNTVSHVLGRFSSAENQQMSLVLQFVVECIELSLKQGVEKAMNVCNS 205
>gi|386840683|ref|YP_006245741.1| peptidyl-tRNA hydrolase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374100984|gb|AEY89868.1| peptidyl-tRNA hydrolase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451793975|gb|AGF64024.1| peptidyl-tRNA hydrolase [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 198
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 80/132 (60%), Gaps = 2/132 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+LAKP +YMNLSG L +YK+PL V+ HD++ + LRL+ GG GHNGLK
Sbjct: 69 VVLAKPMSYMNLSGGPVNALRDFYKVPLGNVVAVHDELDIDYATLRLKLGGGDNGHNGLK 128
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ ++ R+R GIGRPPG+M F+L+ F++ R+ +D + + ++ L++
Sbjct: 129 SMTKAM--GPDYHRVRCGIGRPPGRMQVADFVLKDFSSAERKELDWFVDRAADAVECLVT 186
Query: 152 KGLTESARHFNT 163
+GL + +N+
Sbjct: 187 EGLERAQSAYNS 198
>gi|320335350|ref|YP_004172061.1| peptidyl-tRNA hydrolase [Deinococcus maricopensis DSM 21211]
gi|319756639|gb|ADV68396.1| Peptidyl-tRNA hydrolase [Deinococcus maricopensis DSM 21211]
Length = 203
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 76/136 (55%), Gaps = 1/136 (0%)
Query: 27 VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGG 86
+G VLL KPQT+MN SG + PL +YKL +LV DD+ P G+++ R G HGG
Sbjct: 50 LGTEKVLLVKPQTFMNSSGRAVAPLMTFYKLDGAHLLVVQDDLDSPFGLMKFRLGGRHGG 109
Query: 87 HNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 146
NG++ ++ G F RL++GI RPP DP ++L K+ R +D ++ G +
Sbjct: 110 QNGVRDIITRL-GTDAFPRLKLGISRPPTGWDPAGWVLSKWRDEERTTVDELVRLGANAV 168
Query: 147 KLLLSKGLTESARHFN 162
+ + GL E+ FN
Sbjct: 169 EAWATLGLLEAQARFN 184
>gi|289449607|ref|YP_003474745.1| aminoacyl-tRNA hydrolase [Clostridiales genomosp. BVAB3 str.
UPII9-5]
gi|289184154|gb|ADC90579.1| aminoacyl-tRNA hydrolase [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 192
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 89/161 (55%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
++ A+ I + T K+ G+G + P LL PQT+MNLSGE+ + +YKLPL++
Sbjct: 29 LEYLAQKYDIPIRTAKHKSLIGKGIIVGKPTLLVCPQTFMNLSGEAVRAIRDFYKLPLDK 88
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+++ +DD+ LP G RLR G G HNG++S++ G+ +F R+R+GIG P +
Sbjct: 89 IMIVYDDLDLPVGATRLRLQGSAGTHNGMRSIVQQL-GSGDFPRMRLGIGPKPEYLPLVD 147
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L K + + A++ L+ LS + + R N
Sbjct: 148 YVLSKVGKAQEKPLFAAIEHAAAGLEAWLSGDIDSAMRLSN 188
>gi|294813077|ref|ZP_06771720.1| Peptidyl-tRNA hydrolase [Streptomyces clavuligerus ATCC 27064]
gi|294325676|gb|EFG07319.1| Peptidyl-tRNA hydrolase [Streptomyces clavuligerus ATCC 27064]
Length = 212
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 80/132 (60%), Gaps = 2/132 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+LAKP ++MNLSG L +YK+P R++ HD++ + G LRL+ GG GHNGLK
Sbjct: 83 VVLAKPMSFMNLSGGPVVALRDFYKVPTERIVAIHDELDIDYGTLRLKLGGGDNGHNGLK 142
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ ++ RLR GIGRPPG+M F+L+ F+ R+ +D + + ++ L++
Sbjct: 143 SMTKAM--GPDYHRLRFGIGRPPGRMQVADFVLKDFSGAERKELDYFVDRAADAVEALVT 200
Query: 152 KGLTESARHFNT 163
+GL + +N+
Sbjct: 201 EGLERAQSAYNS 212
>gi|134097415|ref|YP_001103076.1| peptidyl-tRNA hydrolase [Saccharopolyspora erythraea NRRL 2338]
gi|291004595|ref|ZP_06562568.1| peptidyl-tRNA hydrolase [Saccharopolyspora erythraea NRRL 2338]
gi|133910038|emb|CAM00150.1| peptidyl-tRNA hydrolase [Saccharopolyspora erythraea NRRL 2338]
Length = 191
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 89/162 (54%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ D A G A +G +G +LAKP+++MNLSG A +YK+
Sbjct: 31 VADELAARVGGKFKAHKSGAEIVEGRLGGVRAVLAKPRSFMNLSGGPVAGAAKFYKVQPG 90
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V HD++ LP G +RL+ GG GHNGL+S+ + G +++ R+R GI RPPG+MDP
Sbjct: 91 SLIVIHDELDLPYGTVRLKRGGGENGHNGLRSISKSL-GTKDYLRVRFGIDRPPGRMDPA 149
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L+ F+ R+ + + + ++ L +GL + F+
Sbjct: 150 DYVLKDFSGAERKELAYFVDLCADAVESLAKEGLEAAQNRFH 191
>gi|290959808|ref|YP_003490990.1| aminoacyl-tRNA hydrolase [Streptomyces scabiei 87.22]
gi|260649334|emb|CBG72449.1| aminoacyl-tRNA hydrolase [Streptomyces scabiei 87.22]
Length = 200
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 81/132 (61%), Gaps = 2/132 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+LAKP ++MNLSG L +YK+P+ ++ HD++ + GVLRL+ GG GHNGLK
Sbjct: 71 VILAKPMSFMNLSGGPVTALRDFYKVPVANIVAIHDELDIDYGVLRLKLGGGDNGHNGLK 130
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ ++ R+R GIGRPPG+M F+L+ F+A R+ +D + + ++ L+
Sbjct: 131 SMTKAM--GSDYHRVRFGIGRPPGRMQVADFVLKDFSATERKELDYFVDRAADAVECLVI 188
Query: 152 KGLTESARHFNT 163
+GL + +N+
Sbjct: 189 EGLERAQGTYNS 200
>gi|254388784|ref|ZP_05004016.1| peptidyl-tRNA hydrolase [Streptomyces clavuligerus ATCC 27064]
gi|326441621|ref|ZP_08216355.1| peptidyl-tRNA hydrolase [Streptomyces clavuligerus ATCC 27064]
gi|197702503|gb|EDY48315.1| peptidyl-tRNA hydrolase [Streptomyces clavuligerus ATCC 27064]
Length = 199
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 80/132 (60%), Gaps = 2/132 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+LAKP ++MNLSG L +YK+P R++ HD++ + G LRL+ GG GHNGLK
Sbjct: 70 VVLAKPMSFMNLSGGPVVALRDFYKVPTERIVAIHDELDIDYGTLRLKLGGGDNGHNGLK 129
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ ++ RLR GIGRPPG+M F+L+ F+ R+ +D + + ++ L++
Sbjct: 130 SMTKAM--GPDYHRLRFGIGRPPGRMQVADFVLKDFSGAERKELDYFVDRAADAVEALVT 187
Query: 152 KGLTESARHFNT 163
+GL + +N+
Sbjct: 188 EGLERAQSAYNS 199
>gi|400537666|ref|ZP_10801188.1| peptidyl-tRNA hydrolase [Mycobacterium colombiense CECT 3035]
gi|400328710|gb|EJO86221.1| peptidyl-tRNA hydrolase [Mycobacterium colombiense CECT 3035]
Length = 191
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 83/123 (67%), Gaps = 1/123 (0%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V++AKP+ YMN SG GPLA +Y + ++V HDD+ L G +RL+ GG GGHNGL+
Sbjct: 60 VVVAKPRCYMNESGRQVGPLAKFYSVTPGDIIVIHDDLDLDFGRIRLKIGGGEGGHNGLR 119
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
SV N G+++F R+RIGIGRPPG+ DP AF+L+ F+A R + T ++ + +LL+
Sbjct: 120 SVANAL-GSKDFQRVRIGIGRPPGRKDPAAFVLEAFSAAERPEVPTICEQAADATELLIE 178
Query: 152 KGL 154
GL
Sbjct: 179 LGL 181
>gi|300857301|ref|YP_003782285.1| peptidyl-tRNA hydrolase [Clostridium ljungdahlii DSM 13528]
gi|300437416|gb|ADK17183.1| peptidyl-tRNA hydrolase [Clostridium ljungdahlii DSM 13528]
Length = 191
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 99/164 (60%), Gaps = 3/164 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D + I +N K T+G+G + D V+L KP TYMNLSGES A ++K+ +
Sbjct: 26 VDLISSKYNIPINREKFKGTYGEGIIADNKVMLLKPSTYMNLSGESVIEAANFFKIKSSN 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+++ +DD+ L G +R+R +G GGHNG+KSV+ N G F R+++GIG+P G D +
Sbjct: 86 IIIIYDDIDLEIGRIRIRKHGSAGGHNGIKSVIANL-GTDVFPRIKVGIGQPKG--DLVS 142
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQ 165
+L KF+ R I+ L+ +VL+ L++ G+ E+ FN ++
Sbjct: 143 HVLGKFDINERNDIEKVLETSADVLECLINCGVEEAMNKFNGLK 186
>gi|187736599|ref|YP_001878711.1| Aminoacyl-tRNA hydrolase [Akkermansia muciniphila ATCC BAA-835]
gi|238691875|sp|B2UPQ2.1|PTH_AKKM8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|187426651|gb|ACD05930.1| Aminoacyl-tRNA hydrolase [Akkermansia muciniphila ATCC BAA-835]
Length = 190
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 82/147 (55%), Gaps = 7/147 (4%)
Query: 18 CKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLR 77
C+ G G VLL KP T+MN SG GP+ ++KL V V HD++ P GV++
Sbjct: 49 CEVAAGPG------VLLVKPSTFMNESGLCVGPMMRFFKLDPRSVFVIHDEVDFPLGVIK 102
Query: 78 LRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDT 137
LR G GGHNG+KS++ + G +EF RLR GIG+P G+ + +L KF RE +D
Sbjct: 103 LREKGSAGGHNGIKSLIAHM-GTQEFPRLRFGIGQPRGKGEMIGHVLGKFRPEERELLDV 161
Query: 138 ALQEGVEVLKLLLSKGLTESARHFNTI 164
L + + + + G+T + FN +
Sbjct: 162 TLGKAEDAVLYTMEHGITRAGNIFNAV 188
>gi|302534902|ref|ZP_07287244.1| peptidyl-tRNA hydrolase [Streptomyces sp. C]
gi|302443797|gb|EFL15613.1| peptidyl-tRNA hydrolase [Streptomyces sp. C]
Length = 197
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 3 DAFAESQGISMNTVHCKATFGQGFVG-----DAPVLLAKPQTYMNLSGESTGPLAAYYKL 57
D AE G +A +G +G + V++AKP ++MNLSG L +YK+
Sbjct: 34 DLLAERIGGKFKAHKARAQVVEGRMGPPGPLNRRVVIAKPLSFMNLSGGPVTALRDFYKV 93
Query: 58 PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQM 117
PL R++ HD++ + LRL+ GG GHNGLKS+ + ++ R+R GIGRPPG+M
Sbjct: 94 PLERIVAVHDELDIDYATLRLKLGGGDNGHNGLKSMTKSM--GADYHRVRCGIGRPPGRM 151
Query: 118 DPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
F+L+ F++ R+ +D + + ++ L+ +GL + +N+
Sbjct: 152 QVADFVLRDFSSTERKELDWFVDRSADAVECLVQEGLERAQSAYNS 197
>gi|310639512|ref|YP_003944270.1| peptidyl-tRNA hydrolase [Paenibacillus polymyxa SC2]
gi|386038726|ref|YP_005957680.1| peptidyl-tRNA hydrolase [Paenibacillus polymyxa M1]
gi|309244462|gb|ADO54029.1| Peptidyl-tRNA hydrolase [Paenibacillus polymyxa SC2]
gi|343094764|emb|CCC82973.1| peptidyl-tRNA hydrolase [Paenibacillus polymyxa M1]
Length = 186
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 84/161 (52%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+DA A I + CKA G+G +G +L KP TYMNLSGES YYK +
Sbjct: 26 LDALALRHNIQITQSKCKALIGEGHIGGVKTVLIKPMTYMNLSGESLRAYMDYYKADMED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DD+ G +RLR+ G GGHNG+KS++ + G + F R+R+GI RP
Sbjct: 86 LIVVYDDLDTEVGKIRLRYQGSAGGHNGIKSIIQH-TGTQSFNRIRMGISRPEPGHAIVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F +E + +++ L+ L+ + FN
Sbjct: 145 YVLGTFPKKEKELLTGMIEDTCNALEYSLNHPFERTMAEFN 185
>gi|427414474|ref|ZP_18904664.1| peptidyl-tRNA hydrolase [Veillonella ratti ACS-216-V-Col6b]
gi|425714434|gb|EKU77439.1| peptidyl-tRNA hydrolase [Veillonella ratti ACS-216-V-Col6b]
Length = 192
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 86/162 (53%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+IDA A + + KA + VLL KPQT+MN SGES GPL YYK+ +
Sbjct: 25 VIDAMAAKEAHTPWREDFKALITTITIDGEKVLLVKPQTFMNASGESVGPLMRYYKIDAS 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V +DDM LP G +R+R NG GGHNG+KS++ + G EF R GIGRP Q
Sbjct: 85 DVYCVYDDMDLPVGKIRIRPNGSAGGHNGIKSLIAHM-GTSEFPHFRFGIGRPLPQWTVI 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+L F +++++ +++ + + L GL + +N
Sbjct: 144 DHVLAPFPEEQQDKVNKGIEDMAKAILGTLEVGLDKGMNLYN 185
>gi|15612631|ref|NP_240934.1| peptidyl-tRNA hydrolase [Bacillus halodurans C-125]
gi|14195082|sp|Q9KGJ3.1|PTH_BACHD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|10172680|dbj|BAB03787.1| stage V sporulation protein C (peptidyl-tRNA hydrolase) [Bacillus
halodurans C-125]
Length = 185
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 86/163 (52%), Gaps = 3/163 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++DA A I + +G+G + + L KPQT+MN SGES P YY + +
Sbjct: 25 VVDAVARRLNIEIKQSKANGLYGEGRIDGEKIFLLKPQTFMNRSGESVRPFLEYYNMEVE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRP-PGQMDP 119
+LV +DD+ LP G +RLR G GGHNG+KS++ + G +F R+R+G+ RP PG+
Sbjct: 85 DLLVIYDDLDLPVGKIRLRQKGSAGGHNGMKSLIAHL-GTSDFKRIRVGVDRPAPGETVV 143
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+ +L ++ ++ I A+ E + K E FN
Sbjct: 144 Q-HVLGRYRPEEKDAISEAIDLSAEAAEAFTKKPFLEVMNTFN 185
>gi|21221563|ref|NP_627342.1| peptidyl-tRNA hydrolase [Streptomyces coelicolor A3(2)]
gi|289771144|ref|ZP_06530522.1| peptidyl-tRNA hydrolase [Streptomyces lividans TK24]
gi|22095998|sp|Q9K3T8.1|PTH_STRCO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|8894758|emb|CAB95918.1| peptidyl-tRNA hydrolase [Streptomyces coelicolor A3(2)]
gi|289701343|gb|EFD68772.1| peptidyl-tRNA hydrolase [Streptomyces lividans TK24]
Length = 200
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 82/132 (62%), Gaps = 2/132 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+LAKP ++MN+SG L +YK+P+ ++ HD++ + GVLRL+ GG GHNGLK
Sbjct: 71 VILAKPMSFMNVSGGPVTALRDFYKVPVGNIVAVHDELDIDYGVLRLKLGGGDNGHNGLK 130
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ + ++ R+R GIGRPPG+M F+L+ F++ R+ +D + + ++ L+
Sbjct: 131 SITKSL--GADYHRVRFGIGRPPGRMPVADFVLRDFSSTERKELDYFVDRAADAVEALVI 188
Query: 152 KGLTESARHFNT 163
+GL + +N+
Sbjct: 189 EGLERAQSAYNS 200
>gi|296122873|ref|YP_003630651.1| peptidyl-tRNA hydrolase [Planctomyces limnophilus DSM 3776]
gi|296015213|gb|ADG68452.1| peptidyl-tRNA hydrolase [Planctomyces limnophilus DSM 3776]
Length = 191
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 77/138 (55%), Gaps = 1/138 (0%)
Query: 31 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 90
PV+L +PQT+MNLSG S G +A +YK+ L+ DD+ LP G LR+R G GG GL
Sbjct: 55 PVILLEPQTFMNLSGRSVGQIAKFYKMSPADFLIVCDDLNLPLGKLRVRAGGSSGGQKGL 114
Query: 91 KSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 150
++ G RLR+G+GRPPG MD A++L +F R +D A+ + ++ L
Sbjct: 115 ADILQVL-GTDAVPRLRLGVGRPPGTMDAAAYVLAQFRKDERIEVDLAVATAADAAEVWL 173
Query: 151 SKGLTESARHFNTIQKYK 168
+ G+ + FN K
Sbjct: 174 ADGVDSAMNRFNVSSDQK 191
>gi|349700869|ref|ZP_08902498.1| peptidyl-tRNA hydrolase [Gluconacetobacter europaeus LMG 18494]
Length = 190
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 85/155 (54%), Gaps = 2/155 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D A+ G + + +G +G VLL KP TYMNLSGES AA+YKLP
Sbjct: 26 VDRIADRHGFAPWRKRFRGEVAEGMIGRHKVLLLKPMTYMNLSGESVQQAAAFYKLPAEA 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+ FHD++ L G +R++ GG GHNGL+S M+ G +E+ R+R+GIG P +
Sbjct: 86 ITAFHDELDLEPGRIRVKRGGGAAGHNGLRS-MDRMLGTKEYWRVRLGIGHPGSRERVTG 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 156
+L F+ RE +D L + + +LL+ G E
Sbjct: 145 HVLGDFSRTDREWLDPML-DALADEAVLLADGKPE 178
>gi|408355419|ref|YP_006843950.1| peptidyl-tRNA hydrolase [Amphibacillus xylanus NBRC 15112]
gi|407726190|dbj|BAM46188.1| peptidyl-tRNA hydrolase [Amphibacillus xylanus NBRC 15112]
Length = 186
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 88/162 (54%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID G S++ + + V+L +PQTYMNLSG+S PL +Y++ +
Sbjct: 26 VIDELLNRHGWSLDKKKFNGHYCLESLHGEKVVLLQPQTYMNLSGDSVKPLLDFYQIEPS 85
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++LV +DD+ LP G +RLR GGHGGHNG++S++ G ++F R+RIGI RP +
Sbjct: 86 QLLVIYDDLDLPIGKVRLRQTGGHGGHNGMRSIIQTV-GTKQFNRIRIGIDRPQTGITVT 144
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L KF+ + ++ + + + K + +N
Sbjct: 145 DYVLGKFSKAENGLVSDSISIAADACEAWMDKPFLDVMNAYN 186
>gi|389580922|ref|ZP_10170949.1| peptidyl-tRNA hydrolase [Desulfobacter postgatei 2ac9]
gi|389402557|gb|EIM64779.1| peptidyl-tRNA hydrolase [Desulfobacter postgatei 2ac9]
Length = 192
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 1/163 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++DA A+ G +N A + +G + L KP +YMN SG LA Y+K+ +
Sbjct: 29 VVDALADRSGCRLNKEKFNAAYTGVRMGLQEIFLVKPLSYMNRSGIPLQKLADYFKIDIE 88
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V HDDM LP G +++ GHGGHNG++S+++ F G + R+R+GIGRP
Sbjct: 89 NIIVVHDDMDLPFGKIKIVQGRGHGGHNGIRSIIDAF-GQKACVRVRVGIGRPESDRSVT 147
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
+L K+ + +D L + + +L KG+ ++ N+
Sbjct: 148 GHVLGKYTPDEQACLDHVLNDACDACLAILEKGVVKAMNFVNS 190
>gi|385800629|ref|YP_005837033.1| peptidyl-tRNA hydrolase [Halanaerobium praevalens DSM 2228]
gi|309389993|gb|ADO77873.1| peptidyl-tRNA hydrolase [Halanaerobium praevalens DSM 2228]
Length = 185
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 82/140 (58%), Gaps = 1/140 (0%)
Query: 23 GQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNG 82
G F+G V++ +P YMN SG+ L Y+ + +LV HDD+ L G ++ + NG
Sbjct: 46 GDFFLGSEKVIIFQPLQYMNKSGQPIYKLLDYFNIESENLLVIHDDLDLDLGKIKFKQNG 105
Query: 83 GHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEG 142
GGHNG+KS++NN G +EF RL+IGIGRPP + F+L F + +++ + + +
Sbjct: 106 SSGGHNGIKSIINNL-GTKEFKRLKIGIGRPPENVPVPDFVLTTFKSESKKIAEQTVAKA 164
Query: 143 VEVLKLLLSKGLTESARHFN 162
++L+L + + ++ +N
Sbjct: 165 ASAVELMLKEDIMKAMNKYN 184
>gi|414154399|ref|ZP_11410718.1| Peptidyl-tRNA hydrolase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
gi|411454190|emb|CCO08622.1| Peptidyl-tRNA hydrolase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
Length = 203
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 88/153 (57%), Gaps = 10/153 (6%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID+ A G ++ KA GQ +G V+LAKPQTYMNLSG++ L +YKL
Sbjct: 25 VIDSLARQLGAEVSKEQHKALVGQAVIGGTRVILAKPQTYMNLSGQAVVALMNWYKLTPE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPP-GQMD- 118
+LV DD+ LP G LR+R G GG GL++++ G +EF RLR+GIGRP G ++
Sbjct: 85 DLLVIADDLDLPPGRLRMRKKGSDGGQKGLRNII-ELLGTQEFTRLRLGIGRPVHGAVEY 143
Query: 119 -------PKAFLLQKFNAIARERIDTALQEGVE 144
P+A LLQ+ A A E T + EG +
Sbjct: 144 VLGKIAGPEAELLQEAVARAAEAAKTWVLEGTD 176
>gi|384456479|ref|YP_005669077.1| peptidyl-tRNA hydrolase [Candidatus Arthromitus sp. SFB-mouse-Yit]
gi|418015483|ref|ZP_12655048.1| peptidyl-tRNA hydrolase [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|345505818|gb|EGX28112.1| peptidyl-tRNA hydrolase [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|346984825|dbj|BAK80501.1| peptidyl-tRNA hydrolase [Candidatus Arthromitus sp. SFB-mouse-Yit]
Length = 191
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 90/162 (55%), Gaps = 2/162 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
M+D E IS++ + + +G G + ++ KP+T+MNLSG + + Y+K+ ++
Sbjct: 32 MLDRICEDLNISLDNENDTSYYGTGIISGKNIMCMKPKTFMNLSGSAVLEIINYFKISID 91
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV +DD+ L +R++ G HGGHNG+K ++N ++ F R++IGIG +D
Sbjct: 92 DLLVIYDDIYLDVSKIRIKQRGSHGGHNGIKDIINKINTDK-FKRIKIGIGENK-NIDLS 149
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L KF +D+ ++ +++++ L E+ FN
Sbjct: 150 NYVLSKFTYDEMRMLDSKYEDISTCIRMIIEGKLVEAMNLFN 191
>gi|342733111|ref|YP_004771950.1| peptidyl-tRNA hydrolase [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|417958990|ref|ZP_12601868.1| Peptidyl-tRNA hydrolase [Candidatus Arthromitus sp. SFB-1]
gi|417961555|ref|ZP_12603958.1| Peptidyl-tRNA hydrolase [Candidatus Arthromitus sp. SFB-2]
gi|417966804|ref|ZP_12608081.1| Peptidyl-tRNA hydrolase [Candidatus Arthromitus sp. SFB-5]
gi|417968853|ref|ZP_12609830.1| Peptidyl-tRNA hydrolase [Candidatus Arthromitus sp. SFB-co]
gi|418373370|ref|ZP_12965459.1| Peptidyl-tRNA hydrolase [Candidatus Arthromitus sp. SFB-mouse-SU]
gi|342330566|dbj|BAK57208.1| peptidyl-tRNA hydrolase [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|380333028|gb|EIA23695.1| Peptidyl-tRNA hydrolase [Candidatus Arthromitus sp. SFB-2]
gi|380334443|gb|EIA24850.1| Peptidyl-tRNA hydrolase [Candidatus Arthromitus sp. SFB-1]
gi|380338858|gb|EIA27697.1| Peptidyl-tRNA hydrolase [Candidatus Arthromitus sp. SFB-co]
gi|380339671|gb|EIA28372.1| Peptidyl-tRNA hydrolase [Candidatus Arthromitus sp. SFB-5]
gi|380341206|gb|EIA29699.1| Peptidyl-tRNA hydrolase [Candidatus Arthromitus sp. SFB-mouse-SU]
Length = 184
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 90/162 (55%), Gaps = 2/162 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
M+D E IS++ + + +G G + ++ KP+T+MNLSG + + Y+K+ ++
Sbjct: 25 MLDRICEDLNISLDNENDTSYYGTGIISGKNIMCMKPKTFMNLSGSAVLEIINYFKISID 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV +DD+ L +R++ G HGGHNG+K ++N ++ F R++IGIG +D
Sbjct: 85 DLLVIYDDIYLDVSKIRIKQRGSHGGHNGIKDIINKINTDK-FKRIKIGIGENK-NIDLS 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L KF +D+ ++ +++++ L E+ FN
Sbjct: 143 NYVLSKFTYDEMRMLDSKYEDISTCIRMIIEGKLVEAMNLFN 184
>gi|37520107|ref|NP_923484.1| peptidyl-tRNA hydrolase [Gloeobacter violaceus PCC 7421]
gi|46576719|sp|Q7NN75.1|PTH_GLOVI RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|35211099|dbj|BAC88479.1| peptidyl-tRNA hydrolase [Gloeobacter violaceus PCC 7421]
Length = 198
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 92/163 (56%), Gaps = 2/163 (1%)
Query: 2 IDAFAESQGIS-MNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+DA A+ S + K +G +L KP TYMN SG+S +A Y++LP
Sbjct: 28 VDALAKRWQCSWVEKSRFKGYLAEGAGPGGRAILLKPTTYMNHSGQSVRAVADYFRLPPQ 87
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++LV +D++ LP G +RLR G GHNG+KS++ + G +FARLRIGIGR P
Sbjct: 88 QLLVLYDEVALPLGKIRLRPEGSAAGHNGIKSLIEHL-GTNQFARLRIGIGREPPPPVLT 146
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L KF +E++ L VE ++ +L+KGL ++ +N
Sbjct: 147 NYVLGKFAPEEQEQLPAILDGCVEAVEAVLAKGLEKAMSIYNA 189
>gi|51894373|ref|YP_077064.1| peptidyl-tRNA hydrolase [Symbiobacterium thermophilum IAM 14863]
gi|68052923|sp|Q67JD0.1|PTH_SYMTH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|51858062|dbj|BAD42220.1| Stage V sporulation protein C, peptidyl-tRNA hydrolase
[Symbiobacterium thermophilum IAM 14863]
Length = 189
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 89/165 (53%), Gaps = 3/165 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAP--VLLAKPQTYMNLSGESTGPLAAYYKLP 58
++DAFA G+++ + +G+ G V+L KP TYMNLSG S A +Y++
Sbjct: 26 LLDAFARKHGVAIEQRGFEGLYGELRWGAEAEKVILLKPLTYMNLSGRSVAQAARFYRIA 85
Query: 59 LNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMD 118
+LV DD+ L G LRLR G GGHNG+KSV+ G EF RLRIGIGRP +
Sbjct: 86 PADILVLFDDLDLEPGRLRLRAKGSAGGHNGVKSVIAEL-GTAEFPRLRIGIGRPAPGWE 144
Query: 119 PKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L F + AL VE ++ L++G+ + +NT
Sbjct: 145 VIDWVLAPFGPDDAAAVAAALPRAVEAVECFLTEGILAAMNRYNT 189
>gi|319934922|ref|ZP_08009367.1| peptidyl-tRNA hydrolase [Coprobacillus sp. 29_1]
gi|319810299|gb|EFW06661.1| peptidyl-tRNA hydrolase [Coprobacillus sp. 29_1]
Length = 184
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 94/162 (58%), Gaps = 2/162 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D ++ +S++T K + + V+L KP TYMN SGES + Y+K+ +
Sbjct: 25 VMDRLSDVMNVSISTTKFKGEYVKFKYHGEDVILLKPMTYMNNSGESVRQVMDYFKIDVE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV +DDM +P G LRLR +G GGHNG+KS++ + G + F R+R+GI + P ++
Sbjct: 85 DLLVVYDDMDMPVGKLRLRQSGSAGGHNGVKSIIAHV-GTQSFQRIRVGIDKHP-RIKVV 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F + ID +++ V+ ++ L+KG + +N
Sbjct: 143 DYVLGRFQKDEQPLIDQGVEDAVKAIETYLNKGFVAAMNVYN 184
>gi|405983988|ref|ZP_11042293.1| peptidyl-tRNA hydrolase [Slackia piriformis YIT 12062]
gi|404388803|gb|EJZ83885.1| peptidyl-tRNA hydrolase [Slackia piriformis YIT 12062]
Length = 185
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 86/161 (53%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID AE + C A + ++LAKPQ+YMN+SG L A Y++
Sbjct: 26 IDDLAEQLRATYWKTECGALTAKVKYRGEELILAKPQSYMNVSGGPVKQLCATYRIAPAD 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V HD++ + G +R++ GG GHNGLKS+ + + +++ R+R GIGRPPG+M
Sbjct: 86 IVVIHDELDIDPGTVRVKFGGGLAGHNGLKSIADKLQ-TKDWTRVRTGIGRPPGRMPVAD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L AR+ D A E + LL GL ++ + FN
Sbjct: 145 WVLSLPKKEARDDFDQATHLAAEAVLFLLENGLEKTQQRFN 185
>gi|332798113|ref|YP_004459612.1| peptidyl-tRNA hydrolase [Tepidanaerobacter acetatoxydans Re1]
gi|438001016|ref|YP_007270759.1| Peptidyl-tRNA hydrolase [Tepidanaerobacter acetatoxydans Re1]
gi|332695848|gb|AEE90305.1| Peptidyl-tRNA hydrolase [Tepidanaerobacter acetatoxydans Re1]
gi|432177810|emb|CCP24783.1| Peptidyl-tRNA hydrolase [Tepidanaerobacter acetatoxydans Re1]
Length = 189
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 73/126 (57%), Gaps = 1/126 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D AE + +N V K G+ +LL KP T+MNLSG+S +YK+ L +
Sbjct: 26 LDVIAEKLDVKINKVKFKGLLGETVYNKEKILLLKPLTFMNLSGQSVADALNFYKISLEQ 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DDM LP G LR++ GG GGH G+ S++ ++ R+RIGIGRP Q DP
Sbjct: 86 LIVIYDDMDLPVGRLRIKPEGGSGGHRGMDSIIYQLASDK-ICRIRIGIGRPDEQKDPVG 144
Query: 122 FLLQKF 127
+L +F
Sbjct: 145 HVLGRF 150
>gi|333989611|ref|YP_004522225.1| peptidyl-tRNA hydrolase Pth [Mycobacterium sp. JDM601]
gi|333485579|gb|AEF34971.1| peptidyl-tRNA hydrolase Pth [Mycobacterium sp. JDM601]
Length = 194
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 94/156 (60%), Gaps = 4/156 (2%)
Query: 1 MIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLP 58
++D AE G S +H K A G + V+LA+P+ YMN SG PLA +Y +P
Sbjct: 30 VVDLLAERIG-SGFKLHKKSGADVATGRLSGRAVVLARPRCYMNESGRQVWPLAKFYSVP 88
Query: 59 LNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMD 118
V+V HDD+ L G +RL+ GG GGHNGL+S+ G+++F R+R GIGRPPG+ D
Sbjct: 89 PAGVVVIHDDLDLDFGRIRLKQGGGEGGHNGLRSIATVL-GSKDFQRVRWGIGRPPGRQD 147
Query: 119 PKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 154
P AF+LQ F + RE + T ++ + +LL+ GL
Sbjct: 148 PAAFVLQAFGSREREEVPTICEQAADATELLIELGL 183
>gi|408829563|ref|ZP_11214453.1| peptidyl-tRNA hydrolase [Streptomyces somaliensis DSM 40738]
Length = 198
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 81/132 (61%), Gaps = 2/132 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+LAKP +YMNLSG L +YK+P ++ HD++ + GVLRL+ GG GHNGLK
Sbjct: 69 VVLAKPMSYMNLSGGPLTALRDFYKVPTGNIVAVHDELDIDYGVLRLKLGGGDNGHNGLK 128
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ ++ R+R GIGRPPG+M F+L+ F++ R+ +D + + ++ L++
Sbjct: 129 SMTKAM--GPDYHRVRFGIGRPPGRMPVADFVLKDFSSAERKELDYFVDRAADAVEALVT 186
Query: 152 KGLTESARHFNT 163
+GL + +N+
Sbjct: 187 EGLERAQSAYNS 198
>gi|306820707|ref|ZP_07454335.1| aminoacyl-tRNA hydrolase [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|402310282|ref|ZP_10829248.1| aminoacyl-tRNA hydrolase [Eubacterium sp. AS15]
gi|304551317|gb|EFM39280.1| aminoacyl-tRNA hydrolase [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|400368734|gb|EJP21741.1| aminoacyl-tRNA hydrolase [Eubacterium sp. AS15]
Length = 187
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 86/162 (53%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D +E I ++ + A G+G V+L KPQT+MNLSG++ + +YK+
Sbjct: 26 LDLLSEKLNIKIDRIKFNALIGEGNYKGEKVILVKPQTFMNLSGQAVNQIMNFYKVERQN 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+ V +DD+ + G LR+R G G HNG+K+++ G +F R RIG+ +PP MD +
Sbjct: 86 LFVLYDDIDIDIGKLRIRKKGSSGTHNGMKNII-YLLGYDDFPRFRIGVSKPPAYMDLAS 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L KF +++ L + V+ + + +S +N
Sbjct: 145 YVLSKFTDEEVKKLIPVLNDTVDACLYAIETDVDKSMNKYNV 186
>gi|328952986|ref|YP_004370320.1| peptidyl-tRNA hydrolase [Desulfobacca acetoxidans DSM 11109]
gi|328453310|gb|AEB09139.1| Peptidyl-tRNA hydrolase [Desulfobacca acetoxidans DSM 11109]
Length = 199
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 89/162 (54%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID ++ GIS+N C A +G+G V+LA+P+TYMNLSG + L A+++L
Sbjct: 25 IIDVLSQRWGISLNRHTCSAQWGRGGWAGQEVVLAQPETYMNLSGRAVFRLLAFFQLSAA 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+L+ HDD+ LP G L+ GG GGH G+ S++N EF RL++GIGRP +
Sbjct: 85 DLLIIHDDLDLPLGRLKFVLRGGAGGHRGVASIINTIH-TTEFLRLKVGIGRPQYGETVE 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L + + + + L+ +L GL ++ F+
Sbjct: 144 NYVLSPCYPAEIDTYASMIDRTADALEAVLKVGLNQAMSLFH 185
>gi|402311684|ref|ZP_10830620.1| aminoacyl-tRNA hydrolase [Lachnospiraceae bacterium ICM7]
gi|400371208|gb|EJP24172.1| aminoacyl-tRNA hydrolase [Lachnospiraceae bacterium ICM7]
Length = 209
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 90/163 (55%), Gaps = 1/163 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+++ A G ++ K F + +G+ ++ +PQTYMN SGES Y+K+
Sbjct: 44 VVEKLAYELGEDISERKYKGLFAKVRIGNEKAIILEPQTYMNNSGESVRAFMDYFKIEAA 103
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V+V +DD+ L G LR+R G GGHNG+KS++ + G +F R+++G+G P +MD
Sbjct: 104 DVIVVYDDINLEPGNLRIRLKGSAGGHNGIKSLIAHM-GTSDFPRVKVGVGEKPAKMDLA 162
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
+L +F ++ +D A + +E +KL++ + +NT
Sbjct: 163 DHVLGRFGDTDKKLLDEAASDAIEAIKLMVEGQYDTAMNRYNT 205
>gi|392972512|ref|ZP_10337901.1| peptidyl-tRNA hydrolase [Staphylococcus equorum subsp. equorum Mu2]
gi|403047727|ref|ZP_10903185.1| peptidyl-tRNA hydrolase [Staphylococcus sp. OJ82]
gi|392509485|emb|CCI61208.1| peptidyl-tRNA hydrolase [Staphylococcus equorum subsp. equorum Mu2]
gi|402762468|gb|EJX16572.1| peptidyl-tRNA hydrolase [Staphylococcus sp. OJ82]
Length = 190
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 90/167 (53%), Gaps = 6/167 (3%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID + S++ K + +G V+ +P T MNLSGE+ GPL YY + ++
Sbjct: 25 VIDYMLDQNQFSLDKQKFKGAYTIERIGGEKVMFIEPLTMMNLSGEAVGPLMKYYDIDID 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ LP G +RLR G GGHNG+KS++ G +F R+RIG+ RP M
Sbjct: 85 DLVVLYDDLDLPQGEIRLRQKGSAGGHNGIKSMIQVL-GTDQFKRIRIGVDRPSNGMSIV 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKY 167
++LQKF+ + ++ ++ ++ + ES+R + +Y
Sbjct: 144 DYVLQKFSKQEMQIMNKVIEHSARAVEAYI-----ESSRFDRVMNEY 185
>gi|451335537|ref|ZP_21906104.1| Peptidyl-tRNA hydrolase [Amycolatopsis azurea DSM 43854]
gi|449421942|gb|EMD27333.1| Peptidyl-tRNA hydrolase [Amycolatopsis azurea DSM 43854]
Length = 198
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 82/132 (62%), Gaps = 1/132 (0%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+L KP++YMNLSG A ++K+P V+V HD++ + G L+++ GG GHNGL+
Sbjct: 67 VVLVKPRSYMNLSGGPVVGAARFFKIPPAGVVVVHDELDVDFGALKMKLGGGDNGHNGLR 126
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ + G +++ R+R G+GRPPG+ DP F+L+ F+ + R+ + + + ++ L+S
Sbjct: 127 SITKSL-GTKDYYRVRFGVGRPPGRQDPADFVLKDFSTVERKELAFEIDRCADAVEALIS 185
Query: 152 KGLTESARHFNT 163
GL + F+
Sbjct: 186 TGLVAAQNTFHA 197
>gi|404442255|ref|ZP_11007435.1| peptidyl-tRNA hydrolase [Mycobacterium vaccae ATCC 25954]
gi|403657201|gb|EJZ11982.1| peptidyl-tRNA hydrolase [Mycobacterium vaccae ATCC 25954]
Length = 192
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 101/169 (59%), Gaps = 7/169 (4%)
Query: 1 MIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLP 58
++D A+ G VH K A G + V+LAKP+ YMN SG GPLA +Y +
Sbjct: 28 VVDVLADRMGEKFK-VHKKSGAEVATGRLAGRSVVLAKPRVYMNESGRQVGPLAKFYSVA 86
Query: 59 LNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMD 118
V+V HD++ + G +RL+ GG GHNGL+SV + G+ +F R+R+GIGRPPGQ
Sbjct: 87 PAEVVVIHDELDIDFGRIRLKGGGGVAGHNGLRSVSSAL-GSNDFHRVRVGIGRPPGQKS 145
Query: 119 PKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKY 167
F+L+ FN++ R+ + T +++ + +LL++ GL E A+ NT+ +
Sbjct: 146 GATFVLENFNSVERKEVPTIIEQAADATELLIAHGL-EPAQ--NTVHAW 191
>gi|225016416|ref|ZP_03705608.1| hypothetical protein CLOSTMETH_00319 [Clostridium methylpentosum
DSM 5476]
gi|224950801|gb|EEG32010.1| hypothetical protein CLOSTMETH_00319 [Clostridium methylpentosum
DSM 5476]
Length = 209
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 87/163 (53%), Gaps = 2/163 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D AE G ++ + K+ G+ VG LL KP TYMN SGE+ +YK+P+
Sbjct: 48 LDQLAEKSGAAVKKIKFKSLTGEAVVGSRRCLLMKPSTYMNNSGEAVVEAMNFYKIPIEN 107
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPG-QMDPK 120
VLV +DD+ L G LR+R G GGHNG+KS++ G F R+++G+G+ P + D
Sbjct: 108 VLVLYDDISLEPGKLRIRRKGSDGGHNGIKSII-YLTGKDTFPRIKLGVGKKPDPRYDLA 166
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L F+ E ++ A E L++ + ++ +N
Sbjct: 167 KWVLSAFSKEEFEAMEQAFSNAGEAAALIVDGKIDQAMNLYNA 209
>gi|113476455|ref|YP_722516.1| peptidyl-tRNA hydrolase [Trichodesmium erythraeum IMS101]
gi|119391035|sp|Q110N1.1|PTH_TRIEI RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|110167503|gb|ABG52043.1| peptidyl-tRNA hydrolase [Trichodesmium erythraeum IMS101]
Length = 219
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 96/169 (56%), Gaps = 9/169 (5%)
Query: 2 IDAFAESQGISMN-TVHCKATFGQGFVGDAP-VLLAKPQTYMNLSGESTGPLAAYYKLPL 59
ID A +S++ K FG+G A + L KP TYMN SGE+ + +YKLP
Sbjct: 38 IDTIANIWQVSLSENRKFKGEFGEGRRPKAEKIYLLKPLTYMNRSGEAISAVVNWYKLPP 97
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPP----- 114
+ VL+ +DDM LP G LRLR +G GGHNG+KS + + G +EF RLRIGIG+P
Sbjct: 98 SCVLIIYDDMDLPMGRLRLRLSGSAGGHNGMKSAIAHL-GTQEFPRLRIGIGKPKNITAE 156
Query: 115 -GQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
G+ + +L KF+ + + L+ V+ ++L L +G+ ++ +N
Sbjct: 157 RGEAKTISHVLGKFSPKENKLMTQVLELVVDAVELSLKQGIEKAMSLYN 205
>gi|359767553|ref|ZP_09271339.1| peptidyl-tRNA hydrolase [Gordonia polyisoprenivorans NBRC 16320]
gi|378716897|ref|YP_005281786.1| peptidyl-tRNA hydrolase Pth [Gordonia polyisoprenivorans VH2]
gi|359314948|dbj|GAB24172.1| peptidyl-tRNA hydrolase [Gordonia polyisoprenivorans NBRC 16320]
gi|375751600|gb|AFA72420.1| peptidyl-tRNA hydrolase Pth [Gordonia polyisoprenivorans VH2]
Length = 188
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 93/136 (68%), Gaps = 4/136 (2%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
VL+AK +TYMN G GPLA +Y + + ++V HD++ + G++RL+ GG GGHNGL+
Sbjct: 57 VLVAKARTYMNTVGRQIGPLAKFYSVTPDDLIVLHDELDIDFGLVRLKRGGGEGGHNGLR 116
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
SV + G R++ R+R+GIGRPPG+ DP F+L+ F + AR +D ++ G + ++LLL+
Sbjct: 117 SVSQSV-GTRDYLRVRLGIGRPPGRQDPADFVLKPFPSAARAEVDLLIEHGADAVELLLT 175
Query: 152 KGLTESARHFNTIQKY 167
GL E+A+ NT+ +
Sbjct: 176 AGL-EAAQ--NTVHAW 188
>gi|188997589|ref|YP_001931840.1| peptidyl-tRNA hydrolase [Sulfurihydrogenibium sp. YO3AOP1]
gi|259535276|sp|B2V6V4.1|PTH_SULSY RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|188932656|gb|ACD67286.1| Aminoacyl-tRNA hydrolase [Sulfurihydrogenibium sp. YO3AOP1]
Length = 189
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 78/134 (58%), Gaps = 1/134 (0%)
Query: 29 DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHN 88
D V++AKPQTYMNLSG + + YK+ + +LV +DD+ LP G +RLR G GGHN
Sbjct: 53 DYDVIIAKPQTYMNLSGNAVLNILKDYKIKPSEILVVYDDLDLPLGAVRLRLKGSSGGHN 112
Query: 89 GLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKL 148
G+KS++N + EF RL+IGIGRP + + ++L F + +D L E +
Sbjct: 113 GIKSIINTIK-TEEFPRLKIGIGRPEKKEEVSDYVLSPFTKEEKFLLDKVLAHANECILN 171
Query: 149 LLSKGLTESARHFN 162
+L G+ +S N
Sbjct: 172 VLKYGIEKSMNMCN 185
>gi|399923900|ref|ZP_10781258.1| peptidyl-tRNA hydrolase [Peptoniphilus rhinitidis 1-13]
Length = 189
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 90/162 (55%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
IDA A+ I +N + K G+G + V+L KP T+MN SGES + +YKL
Sbjct: 26 IDALADKLNIKVNKIKFKGLVGEGRIAGEKVILLKPHTFMNNSGESVVEILNFYKLKPEN 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+LV DD+ + L+++ NG G HNGLKS++ N G+++FAR +IG+G+ D +
Sbjct: 86 LLVVVDDIDIEFAQLKIKKNGSAGTHNGLKSIV-NLIGSKDFARFKIGVGKKHPNEDLAS 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
F+L F + ++ I+ A+ E + ++ G+ + +N
Sbjct: 145 FVLSNFPSRDKKHIEDAVDACSESIIKTVTDGIDVAMNFYNN 186
>gi|295694756|ref|YP_003587994.1| peptidyl-tRNA hydrolase [Kyrpidia tusciae DSM 2912]
gi|295410358|gb|ADG04850.1| peptidyl-tRNA hydrolase [Kyrpidia tusciae DSM 2912]
Length = 184
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 87/157 (55%), Gaps = 1/157 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A +S+ + + VG+ VLL KPQT+MN SG + G +Y+L
Sbjct: 25 VIDRLAARWSVSVTSRGFHSLTASTRVGEEQVLLLKPQTFMNESGLAVGEAVRWYRLGPE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
R++V +DD+ LP G +RLR+ G GGHNG+KS++ + G F R+RIGIGRP
Sbjct: 85 RLIVVYDDLDLPLGKIRLRYKGSSGGHNGMKSILQHL-GTETFGRVRIGIGRPLKGRSVI 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 157
+L F+ + AL VE++++ + +G ++
Sbjct: 144 DHVLSPFSPDELSTVRPALNRAVELIEIAVQEGFEKA 180
>gi|418475414|ref|ZP_13044815.1| peptidyl-tRNA hydrolase [Streptomyces coelicoflavus ZG0656]
gi|371543979|gb|EHN72738.1| peptidyl-tRNA hydrolase [Streptomyces coelicoflavus ZG0656]
Length = 198
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 82/132 (62%), Gaps = 2/132 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+LAKP ++MN+SG L +YK+P+ ++ HD++ + GVLRL+ GG GHNGLK
Sbjct: 69 VILAKPMSFMNVSGGPVTVLRDFYKVPVGNIVAVHDELDIDYGVLRLKLGGGDNGHNGLK 128
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ + ++ R+R GIGRPPG+M F+L+ F++ R+ +D + + ++ L+
Sbjct: 129 SITKSL--GADYHRVRFGIGRPPGRMPVADFVLRDFSSAERKELDYFVDRAADAVEALVI 186
Query: 152 KGLTESARHFNT 163
+GL + +N+
Sbjct: 187 EGLERAQSAYNS 198
>gi|359424657|ref|ZP_09215769.1| peptidyl-tRNA hydrolase [Gordonia amarae NBRC 15530]
gi|358239954|dbj|GAB05351.1| peptidyl-tRNA hydrolase [Gordonia amarae NBRC 15530]
Length = 188
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 102/169 (60%), Gaps = 7/169 (4%)
Query: 1 MIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLP 58
++DA S G VH K A + PVL+A+P TYMN +G GPLA +Y +
Sbjct: 25 VVDALVASAGERWK-VHKKSGAQVATARLAGEPVLIARPTTYMNTTGRQVGPLAKFYSVA 83
Query: 59 LNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMD 118
++V HD++ + G++RL+ GG GGHNGL+S+ G R++ R+R+GIGRPPG+ D
Sbjct: 84 PEDLIVVHDELDIDFGLVRLKRGGGEGGHNGLRSISQAI-GTRDYLRVRLGIGRPPGRQD 142
Query: 119 PKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKY 167
P ++L+ F + A+ ++ + G E ++LL +GL E+A+ NT+ +
Sbjct: 143 PADYVLKPFPSAAKADVELLIGNGAEAVELLARQGL-EAAQ--NTVHAW 188
>gi|440681983|ref|YP_007156778.1| peptidyl-tRNA hydrolase [Anabaena cylindrica PCC 7122]
gi|428679102|gb|AFZ57868.1| peptidyl-tRNA hydrolase [Anabaena cylindrica PCC 7122]
Length = 214
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 95/169 (56%), Gaps = 8/169 (4%)
Query: 2 IDAFAESQGISM-NTVHCKATFGQGFV-GDAPVLLAKPQTYMNLSGESTGPLAAYYKLPL 59
+DA A + I + + +FG+G G V L KP TYMN SG+S + ++YKLP
Sbjct: 38 VDALARAWQIPLAENRKFQGSFGEGIAPGGGKVRLLKPLTYMNRSGQSIQAVTSWYKLPP 97
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
VL+ +DDM LP G RLR +G GGHNG+KS +++ ++ F RLRIGIG+P G D
Sbjct: 98 ESVLIIYDDMDLPLGKTRLRLSGSAGGHNGMKSTISHL-SSQNFPRLRIGIGKPKGVGDD 156
Query: 120 K-----AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
+ +L +F+A + + L VE ++L +G+ ++ N+
Sbjct: 157 DNSETVSHVLGRFSAAENKLMSLVLDFVVECVELSFKQGVEKAMNRCNS 205
>gi|428781502|ref|YP_007173288.1| peptidyl-tRNA hydrolase [Dactylococcopsis salina PCC 8305]
gi|428695781|gb|AFZ51931.1| peptidyl-tRNA hydrolase [Dactylococcopsis salina PCC 8305]
Length = 190
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 93/164 (56%), Gaps = 3/164 (1%)
Query: 1 MIDAFAESQGISM-NTVHCKATFGQGFVGD-APVLLAKPQTYMNLSGESTGPLAAYYKLP 58
++DA A+ G+ K + +GFV + + L KP TYMN SG++ + +YK+
Sbjct: 28 VVDAIAKDWGLEWRENNRFKGNYSEGFVPNLGKIRLLKPTTYMNHSGQAVRSVCDWYKIA 87
Query: 59 LNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMD 118
VL+ +DD+ LP G LRLR +G GGHNG+KS++ + G ++F RLRIGI + D
Sbjct: 88 PESVLIIYDDLDLPVGKLRLRLSGSAGGHNGIKSIIAHL-GTQQFPRLRIGIKKTDTVKD 146
Query: 119 PKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+ +L KF+ + I AL +VL+ +LS G ++ +N
Sbjct: 147 TISHVLGKFSPDEQPYIKEALAIAPKVLETVLSDGFEKAMNLYN 190
>gi|421077189|ref|ZP_15538160.1| Peptidyl-tRNA hydrolase [Pelosinus fermentans JBW45]
gi|392524577|gb|EIW47732.1| Peptidyl-tRNA hydrolase [Pelosinus fermentans JBW45]
Length = 185
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 93/157 (59%), Gaps = 2/157 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A+ GI +A + + G+ +LL KPQTYMNLSG + G LA +YK+P+
Sbjct: 25 VVDELAQRLGIDRWRNQKEALVAE-YKGNDTILLVKPQTYMNLSGVAVGELARWYKVPVE 83
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+++ DDM LP G LRLR GG GGH G++S++ + + F R+R+GIGRPP
Sbjct: 84 DIIIIFDDMDLPTGRLRLRMKGGSGGHRGIESLLTHLSKD-SFPRVRVGIGRPPAGWQVV 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 157
++L F A + + A+++ + + +L +G+ ++
Sbjct: 143 DYVLSSFTAEEKSLLKAAIEKAADATESILEQGMNKA 179
>gi|392391781|ref|YP_006428383.1| peptidyl-tRNA hydrolase [Desulfitobacterium dehalogenans ATCC
51507]
gi|390522859|gb|AFL98589.1| peptidyl-tRNA hydrolase [Desulfitobacterium dehalogenans ATCC
51507]
Length = 185
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 81/149 (54%), Gaps = 2/149 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D AE + + + +G V L KPQT+MNLSG S LA +YK+
Sbjct: 25 LLDCLAEELKLDFRP-KFQGLVAETMMGGEKVYLLKPQTFMNLSGRSIRELAQFYKITPK 83
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DDM LP G LRLR +G GGHNG+KS + G F RL++GIGRPP D
Sbjct: 84 DIIVVYDDMDLPLGRLRLRSSGSAGGHNGIKSTIAEL-GTEGFWRLKVGIGRPPAGWDSA 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLL 149
++L F ++ +L +G++ + L
Sbjct: 143 RYVLASFTKEEIPVLEESLDKGMKAVALW 171
>gi|158522829|ref|YP_001530699.1| aminoacyl-tRNA hydrolase [Desulfococcus oleovorans Hxd3]
gi|158511655|gb|ABW68622.1| Aminoacyl-tRNA hydrolase [Desulfococcus oleovorans Hxd3]
Length = 193
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 87/157 (55%), Gaps = 1/157 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID AE +++ +G G + V+ KPQ +MN SG LA Y K+
Sbjct: 30 VIDRLAERFSFAIDRTKGSCLYGTGGIEGQRVVAVKPQGFMNSSGPPLFRLAQYLKISSK 89
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
R+LV HDD+ L G L+++ GGHGGHNG+KS+++ F G +F R+RIGI P +
Sbjct: 90 RMLVVHDDIDLAFGKLKIKTKGGHGGHNGIKSIIDTF-GTDDFVRVRIGIDHPGAREGVV 148
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 157
+L +F+A E +D +Q+ E + +L +G T +
Sbjct: 149 GHVLGRFSAEELEHLDGLIQQAGETVTAILKEGATAA 185
>gi|70727508|ref|YP_254424.1| peptidyl-tRNA hydrolase [Staphylococcus haemolyticus JCSC1435]
gi|119391015|sp|Q4L3F9.1|PTH_STAHJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|68448234|dbj|BAE05818.1| peptidyl-tRNA hydrolase [Staphylococcus haemolyticus JCSC1435]
Length = 190
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 89/167 (53%), Gaps = 6/167 (3%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID + S++ K + + VL +P T MNLSGE+ GPL YY + +
Sbjct: 25 VIDYILKKHNFSLDKQKFKGAYTIERLNGDKVLFIEPMTMMNLSGEAVGPLMDYYNVEVE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ L G +RLR G GGHNG+KS++ + G +F R+RIG+GRP M
Sbjct: 85 DLIVLYDDLDLSQGQIRLRQKGSAGGHNGMKSIIKHL-GTDQFKRIRIGVGRPTNGMSVP 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKY 167
++LQKF+ +D ++ ++ + ES+R + + +Y
Sbjct: 144 DYVLQKFSKEEMITMDKVIEHSAHAVEAFI-----ESSRFDHVMNQY 185
>gi|326383811|ref|ZP_08205496.1| peptidyl-tRNA hydrolase [Gordonia neofelifaecis NRRL B-59395]
gi|326197575|gb|EGD54764.1| peptidyl-tRNA hydrolase [Gordonia neofelifaecis NRRL B-59395]
Length = 188
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 93/141 (65%), Gaps = 4/141 (2%)
Query: 27 VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGG 86
+G PVL+AK +TYMN++G GPLA+YY + ++V HD++ + G +RL+ GG GG
Sbjct: 52 IGGEPVLVAKSRTYMNVTGRQIGPLASYYSVAPQDLIVLHDELDIDFGAVRLKLGGGEGG 111
Query: 87 HNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 146
HNGL+S+ G R++ R+R+GIGRPPG+ DP F+L+ F A ++ + GV+
Sbjct: 112 HNGLRSISQTI-GTRDYLRVRLGIGRPPGRQDPADFVLKPFPGSAAAEVELLVANGVDAA 170
Query: 147 KLLLSKGLTESARHFNTIQKY 167
+LL+ +GL E+A+ NT+ +
Sbjct: 171 ELLVEQGL-EAAQ--NTVHAW 188
>gi|156741710|ref|YP_001431839.1| peptidyl-tRNA hydrolase [Roseiflexus castenholzii DSM 13941]
gi|189038162|sp|A7NK01.1|PTH_ROSCS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|156233038|gb|ABU57821.1| Aminoacyl-tRNA hydrolase [Roseiflexus castenholzii DSM 13941]
Length = 214
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 88/164 (53%), Gaps = 2/164 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PL 59
++ A+ + KA +G + V LA PQTYMNLSG++ L +YK+ P
Sbjct: 25 VVTELAQRHHLRFTHKRAKAEIAEGEIAGQRVALALPQTYMNLSGQAVVGLRQWYKIDPA 84
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
+LV +DD+ LP GVLRLR G G HNG++S++ G++ F RLRIGI RPP +
Sbjct: 85 TELLVVYDDVDLPFGVLRLRERGSAGTHNGMRSIV-ALLGSQVFPRLRIGIDRPPVAWNL 143
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F ++ + + L+L+L +G+ + N
Sbjct: 144 ADYVLARFTPEQEAQLPEVTRRAADALELVLREGIVVAMNRINA 187
>gi|429193741|ref|ZP_19185885.1| aminoacyl-tRNA hydrolase [Streptomyces ipomoeae 91-03]
gi|428670549|gb|EKX69428.1| aminoacyl-tRNA hydrolase [Streptomyces ipomoeae 91-03]
Length = 198
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 82/136 (60%), Gaps = 2/136 (1%)
Query: 28 GDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGH 87
G+ V+LAKP +YMNLSG L +YK+P+ ++ HD++ + G LRL+ GG GH
Sbjct: 65 GNRRVILAKPMSYMNLSGGPVNALRDFYKVPVANIVAIHDELDIDYGTLRLKLGGGDNGH 124
Query: 88 NGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 147
NGLKS+ ++ R+R GIGRPPG+M F+L+ F++ R+ +D + + ++
Sbjct: 125 NGLKSMTKAM--GSDYHRVRFGIGRPPGRMPVADFVLKDFSSAERKELDYFVDRAADAVE 182
Query: 148 LLLSKGLTESARHFNT 163
L+ +GL + +N+
Sbjct: 183 CLVIEGLERAQGTYNS 198
>gi|150388005|ref|YP_001318054.1| peptidyl-tRNA hydrolase [Alkaliphilus metalliredigens QYMF]
gi|167011987|sp|A6TJM7.1|PTH_ALKMQ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|149947867|gb|ABR46395.1| Aminoacyl-tRNA hydrolase [Alkaliphilus metalliredigens QYMF]
Length = 185
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 92/162 (56%), Gaps = 2/162 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A GI++N + KA +G+ +G V+LAKPQT+MNLSGES + +YK+
Sbjct: 25 VIDLLAHRLGITVNKLKHKALYGEARIGGEKVILAKPQTFMNLSGESIREMMQFYKIDPE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ + G LR+R +G G HNG+KS + + + F R+RIG+GRP D
Sbjct: 85 NLIVIYDDIDVKVGSLRIRQSGSAGTHNGMKSTIYQLQTD-AFPRIRIGVGRPEFG-DLS 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F + +L+ ++ ++ G+ ++ +N
Sbjct: 143 NYVLGSFTKDEIPLMKESLERATLTVESIVIDGIDKAMNRYN 184
>gi|453363029|dbj|GAC81140.1| peptidyl-tRNA hydrolase [Gordonia malaquae NBRC 108250]
Length = 188
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 93/141 (65%), Gaps = 4/141 (2%)
Query: 27 VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGG 86
+G PVL+AK + YMN++G GPLAAYY + ++V HD++ + G +RL+ GG GG
Sbjct: 52 IGGEPVLVAKARAYMNVTGRQIGPLAAYYSVAPADLIVLHDELDIDFGQVRLKQGGGEGG 111
Query: 87 HNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 146
HNGL+S+ + G R++ R+R+GIGRPPG+ DP F+L+ F + A+ ++ + GV+
Sbjct: 112 HNGLRSITSAV-GTRDYLRVRLGIGRPPGRQDPADFVLKPFPSAAKSDVELLIANGVDAA 170
Query: 147 KLLLSKGLTESARHFNTIQKY 167
+LL+ GL E A+ NT+ +
Sbjct: 171 ELLVQNGL-EGAQ--NTVHAW 188
>gi|408418649|ref|YP_006760063.1| peptidyl-tRNA hydrolase Pth [Desulfobacula toluolica Tol2]
gi|405105862|emb|CCK79359.1| Pth: peptidyl-tRNA hydrolase [Desulfobacula toluolica Tol2]
Length = 193
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 91/163 (55%), Gaps = 1/163 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+++A A ++++ ++ + +G + D V + KP TYMNLSG S A+YYK+ +
Sbjct: 30 VVEALASKSHLTIDKTRFESHYVKGRIKDQDVFIIKPLTYMNLSGFSIHRFASYYKVGIE 89
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+++ HDDM L G +++ + GHGGHNG++S++ F G ++ R+R+G+G P D
Sbjct: 90 DIIIVHDDMDLAFGKIKIVKSRGHGGHNGVRSILEVF-GKKDCIRIRVGVGHPGSGKDVT 148
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
+L F+ + +D + + +L G+T + FNT
Sbjct: 149 GHVLGGFSPDEIKILDHCIDTASDACLYVLENGVTSAMNLFNT 191
>gi|453381134|dbj|GAC84239.1| peptidyl-tRNA hydrolase [Gordonia paraffinivorans NBRC 108238]
Length = 206
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 106/169 (62%), Gaps = 7/169 (4%)
Query: 1 MIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLP 58
++D A S G VH K A + +G PVLLAK + YMN SG GPLA +Y +
Sbjct: 43 VVDGLASSAGERWK-VHKKSGAEVAEVRLGGLPVLLAKARVYMNESGRQIGPLAKFYSVD 101
Query: 59 LNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMD 118
++V HD++ + G++RL+ GG GGHNGL+S+ + G +++ R+R+GIGRPPG+ D
Sbjct: 102 PADLIVVHDELDIDFGLVRLKKGGGEGGHNGLRSI-SQVMGTKDYLRVRMGIGRPPGRQD 160
Query: 119 PKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKY 167
P F+L+ F A R ++ ++ G + ++LL+++GL E+A+ NT+ +
Sbjct: 161 PADFVLKPFPAADRAEVELLVRNGCDAVELLVTQGL-EAAQ--NTVHAW 206
>gi|218441393|ref|YP_002379722.1| aminoacyl-tRNA hydrolase [Cyanothece sp. PCC 7424]
gi|218174121|gb|ACK72854.1| Aminoacyl-tRNA hydrolase [Cyanothece sp. PCC 7424]
Length = 210
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 90/157 (57%), Gaps = 18/157 (11%)
Query: 24 QGFV--GDAP----VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLR 77
QGF G P + L KP TYMN SGES + +YKLP+ +LV +DDM LP G +R
Sbjct: 55 QGFFTEGTGPNHQKIRLLKPLTYMNRSGESVRAVIDWYKLPVESILVIYDDMDLPLGRIR 114
Query: 78 LRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNA-------- 129
LR +G GGHNG+KS++++ G + F RLRIGIG+ + + + +L +F+A
Sbjct: 115 LRLSGSAGGHNGIKSIISHV-GGQNFPRLRIGIGKSNQKKETISHVLGRFSADENQIMSE 173
Query: 130 ---IARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
+ E T+L+EGVE L + + ES+ NT
Sbjct: 174 VLQLVEEATKTSLKEGVEKAMSLYNNRVIESSIFENT 210
>gi|289551699|ref|YP_003472603.1| peptidyl-tRNA hydrolase [Staphylococcus lugdunensis HKU09-01]
gi|315660331|ref|ZP_07913184.1| aminoacyl-tRNA hydrolase [Staphylococcus lugdunensis M23590]
gi|385785246|ref|YP_005761419.1| putative peptidyl-tRNA hydrolase [Staphylococcus lugdunensis
N920143]
gi|418416035|ref|ZP_12989237.1| peptidyl-tRNA hydrolase [Staphylococcus lugdunensis ACS-027-V-Sch2]
gi|418635169|ref|ZP_13197553.1| aminoacyl-tRNA hydrolase [Staphylococcus lugdunensis VCU139]
gi|289181230|gb|ADC88475.1| Peptidyl-tRNA hydrolase [Staphylococcus lugdunensis HKU09-01]
gi|315494620|gb|EFU82962.1| aminoacyl-tRNA hydrolase [Staphylococcus lugdunensis M23590]
gi|339895502|emb|CCB54831.1| putative peptidyl-tRNA hydrolase [Staphylococcus lugdunensis
N920143]
gi|374842118|gb|EHS05565.1| aminoacyl-tRNA hydrolase [Staphylococcus lugdunensis VCU139]
gi|410872945|gb|EKS20882.1| peptidyl-tRNA hydrolase [Staphylococcus lugdunensis ACS-027-V-Sch2]
Length = 190
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 85/151 (56%), Gaps = 1/151 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D + +++ K + +G+ V+ +P T MNLSG++ GPL YY + ++
Sbjct: 25 VVDYLLDKYNFNLDKQKFKGAYTIERIGNDKVMFIEPMTMMNLSGQAVGPLMDYYNVAID 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ L G +RLR G GGHNG+KS++ + G +F R+RIG+GRP M
Sbjct: 85 ELIVLYDDLDLNQGQVRLRQKGSAGGHNGMKSIIQHL-GTEQFKRIRIGVGRPTNGMSVP 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
++LQKF+ +D ++ + ++ +
Sbjct: 144 DYVLQKFSKEEMMTMDHVVEHAAQAVEAFID 174
>gi|451980524|ref|ZP_21928913.1| Peptidyl-tRNA hydrolase [Nitrospina gracilis 3/211]
gi|451762260|emb|CCQ90147.1| Peptidyl-tRNA hydrolase [Nitrospina gracilis 3/211]
Length = 189
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 90/157 (57%), Gaps = 1/157 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D AE I +N ++ +GQG +G PV++AKP TYMN SG + L + +P +
Sbjct: 25 VVDNLAEKHRIPLNQHKHRSLYGQGKIGGHPVVIAKPMTYMNESGRAAQALLDAWNIPPH 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
R++V HDD+ L G ++ + GG G G+ S M G FAR+R+GIGRP +
Sbjct: 85 RMVVVHDDIDLVLGKIKRKFQGGDAGQKGVLSCMERL-GTDRFARIRVGIGRPENKHQIV 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 157
++L F+ E ++ ++E VE ++ +L++ T++
Sbjct: 144 DYVLSPFSEGEMEPLNHMIEEAVERVEAILTEIETQA 180
>gi|158321664|ref|YP_001514171.1| peptidyl-tRNA hydrolase [Alkaliphilus oremlandii OhILAs]
gi|167011988|sp|A8MK43.1|PTH_ALKOO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|158141863|gb|ABW20175.1| Aminoacyl-tRNA hydrolase [Alkaliphilus oremlandii OhILAs]
Length = 185
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 93/164 (56%), Gaps = 8/164 (4%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ I + + KA G+G +G VLL KPQT+MNLSG+S + +YK+
Sbjct: 26 IDMLAKRNNIEVKKLKHKALCGEGTIGGNKVLLVKPQTFMNLSGQSLLDIVQFYKVDPKN 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DD+ +P G LR+R G G HNG+KS++ + + +F R+RIG+G+P D
Sbjct: 86 IVVLYDDIDIPVGTLRIREKGSSGTHNGMKSIIYLLQTD-QFPRIRIGVGKPQFG-DLAD 143
Query: 122 FLLQKFNAIARERIDT---ALQEGVEVLKLLLSKGLTESARHFN 162
++L +F +E I T L+ + ++ L+ G+ S +N
Sbjct: 144 YVLGRF---PKEEIPTMLETLERASQAVETLVKDGIAVSMNRYN 184
>gi|456385230|gb|EMF50798.1| pth protein [Streptomyces bottropensis ATCC 25435]
Length = 200
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 80/132 (60%), Gaps = 2/132 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+LAKP ++MNLSG L +YK+P+ ++ HD++ + G LRL+ GG GHNGLK
Sbjct: 71 VILAKPMSFMNLSGGPVTALRDFYKVPVANIVAIHDELDIDYGALRLKFGGGDNGHNGLK 130
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ ++ R+R GIGRPPG+M F+L+ F+A R+ +D + + ++ L+
Sbjct: 131 SMTKAM--GPDYHRVRFGIGRPPGRMQVADFVLKDFSATERKELDYFVDRAADAVECLVI 188
Query: 152 KGLTESARHFNT 163
+GL + +N+
Sbjct: 189 EGLERAQGTYNS 200
>gi|291296895|ref|YP_003508293.1| peptidyl-tRNA hydrolase [Meiothermus ruber DSM 1279]
gi|290471854|gb|ADD29273.1| peptidyl-tRNA hydrolase [Meiothermus ruber DSM 1279]
Length = 192
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 78/133 (58%), Gaps = 1/133 (0%)
Query: 33 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 92
LL KP T+ N +GE+ PLA YY++P R+LV HD++ LP G LR + G + G+ GL+S
Sbjct: 57 LLVKPTTFYNATGEAVAPLARYYRVPPERILVVHDELDLPPGRLRFKAGGSNAGNYGLES 116
Query: 93 VMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 152
+ + G R+F RLRIGIG+PP ++L F+ +D + E KL ++
Sbjct: 117 ITAHL-GTRDFHRLRIGIGKPPSPEAGAGWVLSGFHPEVVPIMDKVISTAAEAAKLWATE 175
Query: 153 GLTESARHFNTIQ 165
GL + + +N ++
Sbjct: 176 GLEAAQKKYNGLK 188
>gi|418047100|ref|ZP_12685188.1| Peptidyl-tRNA hydrolase [Mycobacterium rhodesiae JS60]
gi|353192770|gb|EHB58274.1| Peptidyl-tRNA hydrolase [Mycobacterium rhodesiae JS60]
Length = 191
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 92/141 (65%), Gaps = 2/141 (1%)
Query: 20 ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 79
A G +G PV+LAKP+TYMN SG GPLA +Y + ++V HD++ + G +RL+
Sbjct: 48 AEIVTGRLGHRPVVLAKPRTYMNESGRQVGPLAKFYSVMPTDLIVIHDELDIDFGRIRLK 107
Query: 80 HNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTAL 139
GG GGHNGL+SV ++ G + F R+RIG+GRPPG+ DP A++L+ F+A R +
Sbjct: 108 LGGGEGGHNGLRSVASSL-GTKNFQRVRIGVGRPPGRKDPAAYVLETFSAAERPEVPAIC 166
Query: 140 QEGVEVLKLLLSKGLTESARH 160
++ + +LL+ GL E+A++
Sbjct: 167 EQAADATELLIEVGL-ETAQN 186
>gi|328956314|ref|YP_004373647.1| peptidyl-tRNA hydrolase [Coriobacterium glomerans PW2]
gi|328456638|gb|AEB07832.1| peptidyl-tRNA hydrolase [Coriobacterium glomerans PW2]
Length = 212
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 69/96 (71%), Gaps = 1/96 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+L KPQ++MN SG LAA Y + +LV HD++ +P G +R++ GGH GHNGL+
Sbjct: 71 VVLVKPQSFMNTSGGPISKLAAAYGIEPGELLVIHDELDIPAGDVRVKIGGGHAGHNGLR 130
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKF 127
S+++ G+R+FAR+R+GIG+PPG+M F+L++F
Sbjct: 131 SIIDKL-GSRDFARIRVGIGKPPGKMSVADFVLRRF 165
>gi|291445313|ref|ZP_06584703.1| peptidyl-tRNA hydrolase [Streptomyces roseosporus NRRL 15998]
gi|291348260|gb|EFE75164.1| peptidyl-tRNA hydrolase [Streptomyces roseosporus NRRL 15998]
Length = 197
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 80/132 (60%), Gaps = 2/132 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+L KP +YMNLSG L +YK+P + V+V HD++ + G LRL+ GG GHNGLK
Sbjct: 68 VVLVKPMSYMNLSGGPVTALRDFYKVPTDHVVVVHDELDVDYGALRLKLGGGDNGHNGLK 127
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ ++ R+R GIGRPPG+M F+L+ F++ R+ + + + ++ LL+
Sbjct: 128 SMTKAM--GPDYHRVRFGIGRPPGRMQVADFVLKDFSSTERKELAFLVDRSADAVECLLA 185
Query: 152 KGLTESARHFNT 163
+GL + +N+
Sbjct: 186 EGLERAQSAYNS 197
>gi|29830107|ref|NP_824741.1| peptidyl-tRNA hydrolase [Streptomyces avermitilis MA-4680]
gi|46576777|sp|Q82HE5.1|PTH_STRAW RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|29607217|dbj|BAC71276.1| putative peptidyl-tRNA hydrolase [Streptomyces avermitilis MA-4680]
Length = 203
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 79/132 (59%), Gaps = 2/132 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+LAKP +YMNLSG L +YK+P+ ++ HD++ + GVLRL+ GG GHNGLK
Sbjct: 74 VILAKPMSYMNLSGGPVNALREFYKVPVANIVAVHDELDIDYGVLRLKLGGGDNGHNGLK 133
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ ++ R+R GIGRPPG+M F+L+ F + R+ +D + + + L+
Sbjct: 134 SMTKAM--GPDYHRVRFGIGRPPGRMQVADFVLKDFASAERKELDYLVDRAADAAECLVI 191
Query: 152 KGLTESARHFNT 163
+GL + +N+
Sbjct: 192 EGLERAQGTYNS 203
>gi|335357789|ref|ZP_08549659.1| peptidyl-tRNA hydrolase [Lactobacillus animalis KCTC 3501]
Length = 188
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/147 (41%), Positives = 84/147 (57%), Gaps = 2/147 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D FA++ G+S N A G VG VLLAKP TYMN SG + + YY L L+
Sbjct: 25 IVDRFADANGLSFNREKFDAQLADGMVGGQKVLLAKPTTYMNESGRAVRQIVDYYDLDLD 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V++ +DDM L CG LRLR G GGHNG+KS++ + G ++F RLR+GI P Q
Sbjct: 85 DVIIVYDDMDLDCGRLRLRQKGSAGGHNGIKSLIAHL-GTQQFDRLRVGIDHPK-QTKVV 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLK 147
++L +F RE D + V L+
Sbjct: 143 DWVLGRFTPEQRENFDLGAADAVAALE 169
>gi|333896009|ref|YP_004469883.1| peptidyl-tRNA hydrolase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333111274|gb|AEF16211.1| Peptidyl-tRNA hydrolase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 190
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 91/162 (56%), Gaps = 3/162 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID+ ++ I++N + K+ G+G ++L KPQT+MN SGE+ + +YKLPL+
Sbjct: 25 VIDSLSKKLDIAVNKIKFKSLIGEGIYKGEKIVLQKPQTFMNSSGEAVYDIVDFYKLPLS 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD L G +R+R G GGHNG+KS++ + +F R+R+GIG+P G M
Sbjct: 85 NLIVVYDDKDLDVGKIRVRKKGSAGGHNGMKSII-YILNSEDFPRVRLGIGKPKGDM--I 141
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+L KF + + ++ + ++ G+ + +N
Sbjct: 142 QHVLGKFEGRDMDIVANSIDNAANAVLDIIENGVEHAMNLYN 183
>gi|303324919|pdb|3KJZ|A Chain A, Crystal Structure Of Native Peptidyl-Trna Hydrolase From
Mycobacterium Smegmatis
gi|311772055|pdb|3KK0|A Chain A, Crystal Structure Of Partially Folded Intermediate State
Of Peptidyl- Trna Hydrolase From Mycobacterium Smegmatis
gi|312208144|pdb|3P2J|A Chain A, Crystal Structure Of Peptidyl-Trna Hydrolase From
Mycobacterium Smegmatis At 2.2 A Resolution
Length = 191
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 97/154 (62%), Gaps = 6/154 (3%)
Query: 16 VHCK--ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPC 73
VH K A G + V+LAKP+ MN SG GPLA +Y +P +++V HD++ +
Sbjct: 42 VHKKSGAEVVTGRLAGTTVVLAKPRISMNESGRQVGPLAKFYSVPPQQIVVIHDELDIDF 101
Query: 74 GVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARE 133
G +RL+ GG GGHNGL+SV + G + F R+RIG+GRPPG+ DP AF+L+ F + R
Sbjct: 102 GRIRLKLGGGEGGHNGLRSVASAL-GTKNFHRVRIGVGRPPGRKDPAAFVLENFTSAERA 160
Query: 134 RIDTALQEGVEVLKLLLSKGLTESARHFNTIQKY 167
+ T +++ + +LL+++GL E A+ NT+ +
Sbjct: 161 EVPTIVEQAADATELLIAQGL-EPAQ--NTVHAW 191
>gi|254423495|ref|ZP_05037213.1| peptidyl-tRNA hydrolase [Synechococcus sp. PCC 7335]
gi|196190984|gb|EDX85948.1| peptidyl-tRNA hydrolase [Synechococcus sp. PCC 7335]
Length = 220
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 94/168 (55%), Gaps = 7/168 (4%)
Query: 1 MIDAFAES-QGISMN-TVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLP 58
+IDA A S +S+ + G+ + V+L KP TYMN SG++ + +YKL
Sbjct: 48 IIDALANSFSNVSLTPNKRFQGATGEFWSAGERVVLLKPTTYMNRSGQAVRAVLDWYKLE 107
Query: 59 LNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMD 118
VLV +DDM LP G LR+R +GG GGHNG+KS++++ G +EF RLR+G+G D
Sbjct: 108 PTAVLVIYDDMDLPTGRLRMRLSGGAGGHNGMKSIISHL-GTKEFPRLRVGVGSADKSGD 166
Query: 119 PK----AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+ +L +F+ R+ +D + V+ + L L KG+ S +N
Sbjct: 167 RDGAVVSHVLGRFSPSDRKIVDAVIPMAVDAVDLSLRKGVERSMNLYN 214
>gi|347731173|ref|ZP_08864275.1| peptidyl-tRNA hydrolase [Desulfovibrio sp. A2]
gi|347520060|gb|EGY27203.1| peptidyl-tRNA hydrolase [Desulfovibrio sp. A2]
Length = 202
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 81/134 (60%), Gaps = 1/134 (0%)
Query: 31 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 90
P L+AKPQT+MNLSGE+ +A+YY++ +LV HD++ +P G ++ + GG+ GHNGL
Sbjct: 67 PWLVAKPQTFMNLSGEAVLAIASYYRVKPASILVVHDELDIPFGRMKFKTGGGNAGHNGL 126
Query: 91 KSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 150
KS+ G +F RLR+GIGRPP + ++L + + ++ +D L V + L
Sbjct: 127 KSI-TQLLGTPDFHRLRLGIGRPPHGGETTNWVLGRLSGPEQDLLDKLLPAAVRAMTLFA 185
Query: 151 SKGLTESARHFNTI 164
++G T + + N
Sbjct: 186 AQGATATTQFANAF 199
>gi|261343915|ref|ZP_05971560.1| aminoacyl-tRNA hydrolase [Providencia rustigianii DSM 4541]
gi|282568301|gb|EFB73836.1| aminoacyl-tRNA hydrolase [Providencia rustigianii DSM 4541]
Length = 196
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 80/131 (61%)
Query: 27 VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGG 86
+G + L P T+MNLSG+S +A +Y++ L+ +LV HD++ LP GV +++ G +GG
Sbjct: 55 IGGDDIRLLVPTTFMNLSGKSVAAVANFYRINLDEILVAHDELDLPPGVAKMKLGGSNGG 114
Query: 87 HNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 146
HNGLK + + F N F RLRIGIG P + F+L K ++ ID A+ E +
Sbjct: 115 HNGLKDIQSKFANNPNFYRLRIGIGHPGDKNKVVGFVLGKPPMSEQKLIDDAIDEALRCT 174
Query: 147 KLLLSKGLTES 157
++LLS G+ ++
Sbjct: 175 EILLSDGMDKA 185
>gi|406837953|ref|ZP_11097547.1| peptidyl-tRNA hydrolase [Lactobacillus vini DSM 20605]
Length = 189
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 87/167 (52%), Gaps = 3/167 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A+ G++ +A + +LLAKP TYMN SG S L YY L N
Sbjct: 25 VLDHLAQQAGLTFTGPRQEAMIAKDHCYQQTILLAKPTTYMNESGRSVRALLNYYDLEPN 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV HDD+ LP G LRLR G GGHNG+KS++ G + F R+RIGI P Q
Sbjct: 85 DLLVVHDDLDLPTGQLRLRQKGSAGGHNGIKSIIAAVNG-QNFKRIRIGIDHPNKQT-VV 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLL-SKGLTESARHFNTIQK 166
++L +F+A + I + + + ++ L + ++ FN +K
Sbjct: 143 DWVLSRFDAQQHDLITQGIDQAIAAIRFWLETDDFNQAMNRFNHKEK 189
>gi|357412970|ref|YP_004924706.1| peptidyl-tRNA hydrolase [Streptomyces flavogriseus ATCC 33331]
gi|320010339|gb|ADW05189.1| peptidyl-tRNA hydrolase [Streptomyces flavogriseus ATCC 33331]
Length = 197
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 81/132 (61%), Gaps = 2/132 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+LAKP +YMNLSG L +YK+P + V+ HD++ + G+LRL+ GG GHNGLK
Sbjct: 68 VVLAKPMSYMNLSGGPVTALRDFYKVPTDHVVAVHDELDIDFGMLRLKLGGGDNGHNGLK 127
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ ++ R+R GIGRPPG+M F+L+ F++ R+ + + + ++ LL+
Sbjct: 128 SMTKAM--GPDYHRVRFGIGRPPGRMQVADFVLKDFSSAERKELAYLVDRSADAVESLLA 185
Query: 152 KGLTESARHFNT 163
+GL + +N+
Sbjct: 186 EGLERAQSAYNS 197
>gi|153811641|ref|ZP_01964309.1| hypothetical protein RUMOBE_02033 [Ruminococcus obeum ATCC 29174]
gi|149832382|gb|EDM87467.1| aminoacyl-tRNA hydrolase [Ruminococcus obeum ATCC 29174]
Length = 192
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 90/163 (55%), Gaps = 2/163 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PL 59
+ID E + + V A +G+G + PV+L KP +YMNLSG +A Y+K+ P
Sbjct: 25 VIDKLVEEYNVPQSGVKFNAMYGKGRIEGQPVILMKPLSYMNLSGGPVRDMANYFKIDPE 84
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
++V +DD+ L G LR+R G GGHNG+K ++ G + F R+++G+G P D
Sbjct: 85 TEMIVIYDDIDLEPGQLRIRKKGSAGGHNGIKHIIQQL-GTQTFVRIKVGVGAKPKGWDL 143
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+L +F + R+ ++ A + + ++++L+ + + FN
Sbjct: 144 ADHVLGRFGSNERKLVEEAQERACKAVEMILADSVDAAMNQFN 186
>gi|374620518|ref|ZP_09693052.1| peptidyl-tRNA hydrolase [gamma proteobacterium HIMB55]
gi|374303745|gb|EHQ57929.1| peptidyl-tRNA hydrolase [gamma proteobacterium HIMB55]
Length = 200
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 87/162 (53%), Gaps = 6/162 (3%)
Query: 13 MNTVHCKAT------FGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFH 66
+N + KA G+G V L P T+MN SG++ G A Y+++ +L+ H
Sbjct: 36 LNAIELKADKKVAGRIGRGIVNGQDTRLLIPDTFMNHSGKAVGLAAKYFQISPEHILIAH 95
Query: 67 DDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQK 126
D++ +P G R + +GGHGGHNGL+ ++ G+R F RLR+GIG P A++L K
Sbjct: 96 DELDMPPGASRFKFDGGHGGHNGLRDIIPALGGSRAFWRLRVGIGHPGNANKVSAWVLNK 155
Query: 127 FNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYK 168
+ I + ID + E + L+LL++ ++ ++ K K
Sbjct: 156 ASKIEQALIDQSQNEAIRALELLMAGDDVKAMTQLHSNDKTK 197
>gi|393198756|ref|YP_006460598.1| peptidyl-tRNA hydrolase [Solibacillus silvestris StLB046]
gi|327438087|dbj|BAK14452.1| peptidyl-tRNA hydrolase [Solibacillus silvestris StLB046]
Length = 187
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 88/162 (54%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A +N + + + V+L KP TYMNLSGE PL Y+ + +
Sbjct: 25 VIDELANRWNAPLNQTKFNGMYATVYRPEGKVILLKPLTYMNLSGECVRPLMDYFDIEIE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ L G LRLR G GGHNG+KS++ + G +EF R+R+G+ RPP M
Sbjct: 85 DIIVIYDDLDLETGKLRLRGKGSAGGHNGIKSLIQHL-GTQEFNRIRVGVSRPPAGMKVA 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L KF+ + + A+++ + ++ L+K E FN
Sbjct: 144 DYVLAKFSKEDQPIVKEAVEKSCDAVETALTKPFLEVMNKFN 185
>gi|433602543|ref|YP_007034912.1| Peptidyl-tRNA hydrolase [Saccharothrix espanaensis DSM 44229]
gi|407880396|emb|CCH28039.1| Peptidyl-tRNA hydrolase [Saccharothrix espanaensis DSM 44229]
Length = 189
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 89/162 (54%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A G A +G +G V+LAKP+ YMN SG A +YK+
Sbjct: 29 VLDELAGRIGGRFKAHKGGAEVLEGRLGGRRVVLAKPRGYMNTSGGPVAGTANFYKVEPA 88
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V HD++ LP +R++ GG GHNGL+S+ + G +++ R+R G+ RPPG+MDP
Sbjct: 89 NIVVVHDELDLPFATVRMKLGGGDNGHNGLRSITKSL-GTKDYHRVRFGVDRPPGRMDPA 147
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L+ F+ + R+ + L + ++ LL GL + F+
Sbjct: 148 DYVLRNFSLVERKELAFELDRAADAVEALLELGLEAAQNKFH 189
>gi|295101118|emb|CBK98663.1| peptidyl-tRNA hydrolase [Faecalibacterium prausnitzii L2-6]
Length = 192
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 89/162 (54%), Gaps = 2/162 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D A GIS++ + +GQG V V+L KP TYMNLSG+S GPLA ++K+P +
Sbjct: 31 LDYLAGKWGISVSKTKFQGLWGQGEVDGHKVVLLKPLTYMNLSGDSIGPLAGFFKIPSDH 90
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIG-RPPGQMDPK 120
V+V DD+ G LR+R +G GGHNGLKS++ G F R+RIG+G +P D
Sbjct: 91 VIVLCDDITQDPGKLRIRPSGSAGGHNGLKSIIARL-GGENFPRIRIGVGAKPRPDYDLA 149
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L KF + + + V L++ L + +N
Sbjct: 150 DWVLGKFPPDDAKALADRCPDIAAVATLIMDGKLGLAQSKYN 191
>gi|434405779|ref|YP_007148664.1| peptidyl-tRNA hydrolase [Cylindrospermum stagnale PCC 7417]
gi|428260034|gb|AFZ25984.1| peptidyl-tRNA hydrolase [Cylindrospermum stagnale PCC 7417]
Length = 213
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 87/148 (58%), Gaps = 7/148 (4%)
Query: 22 FGQGFV-GDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRH 80
+G+G G V L KP TYMN SG+S + ++YKLP VLV +DDM LP G RLR
Sbjct: 59 YGEGMAPGGGKVRLLKPLTYMNRSGQSIQAVTSWYKLPAESVLVIYDDMDLPLGKTRLRL 118
Query: 81 NGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK-----AFLLQKFNAIARERI 135
+G GGHNG+KS + + +++F RLRIGIG+P G + + +L +F+ + +
Sbjct: 119 SGSAGGHNGMKSTIAHL-SSQDFPRLRIGIGKPKGAANSDDSETVSHVLGRFSGAETKLM 177
Query: 136 DTALQEGVEVLKLLLSKGLTESARHFNT 163
LQ VE ++L L +G+ ++ N+
Sbjct: 178 SLVLQFVVECVELSLKQGVEKAMNRCNS 205
>gi|295838327|ref|ZP_06825260.1| aminoacyl-tRNA hydrolase [Streptomyces sp. SPB74]
gi|197695880|gb|EDY42813.1| aminoacyl-tRNA hydrolase [Streptomyces sp. SPB74]
Length = 200
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 81/132 (61%), Gaps = 2/132 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V++AKP ++MNLSG L +YK+PL RV+ HD++ + GVLRL+ GG GHNGLK
Sbjct: 71 VVIAKPLSFMNLSGGPVTALRDFYKVPLERVVAVHDELDVDYGVLRLKLGGGDNGHNGLK 130
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ + R+R GIGRPPG+ F+L+ F++ R+ +D + + ++ L++
Sbjct: 131 SMTKAM--GPGYHRVRFGIGRPPGRTQVADFVLRDFSSAERKELDYFVDRAADAVEALVT 188
Query: 152 KGLTESARHFNT 163
+GL + +N+
Sbjct: 189 EGLERAQGSYNS 200
>gi|312144319|ref|YP_003995765.1| peptidyl-tRNA hydrolase [Halanaerobium hydrogeniformans]
gi|311904970|gb|ADQ15411.1| peptidyl-tRNA hydrolase [Halanaerobium hydrogeniformans]
Length = 185
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 78/141 (55%), Gaps = 1/141 (0%)
Query: 22 FGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHN 81
+G F +++ +P YMN SG+ L YY + L +LV HDD+ L G +R + N
Sbjct: 45 YGDYFFAGEKIIIFQPMKYMNRSGQPIAKLLRYYDIELEDLLVIHDDLDLDLGKIRFKRN 104
Query: 82 GGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQE 141
G GGHNG+KS++N +++F RL++G+GRPPG + ++L F ++ +
Sbjct: 105 GSSGGHNGIKSIINRL-DSKDFKRLKVGVGRPPGNIPVSDYVLTTFQGEEKKIASEVIDR 163
Query: 142 GVEVLKLLLSKGLTESARHFN 162
V ++L+L + + + +N
Sbjct: 164 SVSAVELMLKEDIVRAMNMYN 184
>gi|258654662|ref|YP_003203818.1| peptidyl-tRNA hydrolase [Nakamurella multipartita DSM 44233]
gi|258557887|gb|ACV80829.1| peptidyl-tRNA hydrolase [Nakamurella multipartita DSM 44233]
Length = 195
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 96/157 (61%), Gaps = 1/157 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ D A G + A +G +G V+LAKP++YMNLSG +T LA ++ +
Sbjct: 33 VADVLAGRLGAGFKSHKAGADVVEGRLGARRVILAKPRSYMNLSGGATAALAKFFSVVPA 92
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
RV+ HD++ LP +R++ GG GGHNGL+S+ + G +++ R+R GIGRPPG+MDP
Sbjct: 93 RVIAVHDELDLPPSTIRVKQGGGEGGHNGLRSISASL-GTKDYLRVRFGIGRPPGRMDPA 151
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 157
F+L+ F+A R+ + L+ + ++LL+ +GL +
Sbjct: 152 DFVLRDFSAAERKDLGVDLEHAADAVELLVEQGLEAT 188
>gi|404259526|ref|ZP_10962835.1| peptidyl-tRNA hydrolase [Gordonia namibiensis NBRC 108229]
gi|403401873|dbj|GAC01245.1| peptidyl-tRNA hydrolase [Gordonia namibiensis NBRC 108229]
Length = 165
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 103/167 (61%), Gaps = 7/167 (4%)
Query: 3 DAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
D +S G VH K A + +G VL+AKP+ YMN SG GPLA +Y +
Sbjct: 4 DGLVDSAGERWK-VHKKSGAEVAEVRLGGQSVLVAKPRVYMNESGRQIGPLAKFYSVAPT 62
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V HD++ + G++RL+ GG GGHNGL+S+ + G R++ R+R+GIGRPPG+ DP
Sbjct: 63 DLIVIHDELDIDFGLVRLKRGGGEGGHNGLRSI-SQVMGTRDYLRVRMGIGRPPGRQDPA 121
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKY 167
F+L+ F + R ++ ++ G + ++LL+S+ L ESA+ NT+ +
Sbjct: 122 DFVLKPFPSADRAEVELMIRNGCDAVELLVSQDL-ESAQ--NTVHAW 165
>gi|366087295|ref|ZP_09453780.1| peptidyl-tRNA hydrolase [Lactobacillus zeae KCTC 3804]
Length = 185
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 84/151 (55%), Gaps = 2/151 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A+ G+ ++ + A + D V L KPQTYMN SG + L +Y++ L+
Sbjct: 25 VVDGLAKRLGLKLDKLEFDAATATTRIHDEKVFLVKPQTYMNASGRAVRELMMFYQIRLD 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV HDDM L G LRLR G GGHNG+K +++ G+ EF RL+IGI P Q
Sbjct: 85 EILVVHDDMDLTLGKLRLRQRGSAGGHNGIKDIISA-TGSDEFYRLKIGIQHPQRQR-VV 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
++L F+ ++ ID A+ + L+ L+
Sbjct: 143 DWVLTPFSQADQQTIDEAITRADDALEDWLN 173
>gi|334134032|ref|ZP_08507561.1| aminoacyl-tRNA hydrolase [Paenibacillus sp. HGF7]
gi|333608379|gb|EGL19677.1| aminoacyl-tRNA hydrolase [Paenibacillus sp. HGF7]
Length = 189
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 84/161 (52%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID FAE G+S CK + V L KP TYMNLSGES +YK+ ++
Sbjct: 26 IDRFAEKWGVSSFQNKCKGHLAEVRVNGTKAYLLKPMTYMNLSGESIRAFMDFYKVDVSD 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+++ +DDM P G +RLR+ G GGHNG+KSV+ + G F R+R+GI RP
Sbjct: 86 LVILYDDMDTPFGNIRLRYQGSAGGHNGIKSVIAH-TGTSTFNRIRMGINRPNPGYPIVD 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F+ + L + E ++ LS+ ++ FN
Sbjct: 145 YVLSNFSKAETGALPAVLDKTCEAMEHCLSEPFEKTMAVFN 185
>gi|68536582|ref|YP_251287.1| peptidyl-tRNA hydrolase [Corynebacterium jeikeium K411]
gi|260577725|ref|ZP_05845660.1| peptidyl-tRNA hydrolase 2 (PTH 2) [Corynebacterium jeikeium ATCC
43734]
gi|119390905|sp|Q4JU38.1|PTH2_CORJK RecName: Full=Peptidyl-tRNA hydrolase 2; Short=PTH 2
gi|68264181|emb|CAI37669.1| pthB [Corynebacterium jeikeium K411]
gi|258604120|gb|EEW17362.1| peptidyl-tRNA hydrolase 2 (PTH 2) [Corynebacterium jeikeium ATCC
43734]
Length = 240
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 87/147 (59%), Gaps = 8/147 (5%)
Query: 27 VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGG 86
V + PVLL + TYMN SGE+ GPLA+ LP R++V HD++ + G +R++ GG GG
Sbjct: 98 VEETPVLLLRSTTYMNNSGEAVGPLASALSLPAERIIVCHDELDIAAGQVRIKDKGGEGG 157
Query: 87 HNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNA--IARER--IDTALQEG 142
HNGL+S+ G + + R+R+GIGRPP F+L F I E ++ L++
Sbjct: 158 HNGLRSMTAEL-GTQHYVRVRMGIGRPPKGTSVIDFVLSPFEEADIDAENGWMENTLRDS 216
Query: 143 VEVLKLLLSKGLTESARHFNTIQKYKH 169
V+ + L+++ G T+ AR N I KH
Sbjct: 217 VDSVTLIVNNG-TDIAR--NDIHTRKH 240
>gi|428300098|ref|YP_007138404.1| peptidyl-tRNA hydrolase [Calothrix sp. PCC 6303]
gi|428236642|gb|AFZ02432.1| peptidyl-tRNA hydrolase [Calothrix sp. PCC 6303]
Length = 209
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 93/168 (55%), Gaps = 7/168 (4%)
Query: 2 IDAFAESQGISMN-TVHCKATFGQGFVGDAPVL-LAKPQTYMNLSGESTGPLAAYYKLPL 59
IDA + I ++ + +G+G L L KP TYMN SG+S + ++YKL
Sbjct: 37 IDALSRGWKIPLSENRKFQGDYGEGIAPSGGKLRLLKPMTYMNRSGQSMQAVTSWYKLAP 96
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPG---- 115
VLV +DDM LP G RLR +G GGHNG+KS + + GN +F RLRIGIG+P
Sbjct: 97 ESVLVIYDDMDLPIGKTRLRLSGSAGGHNGMKSAIAHL-GNDQFPRLRIGIGKPKNVSAE 155
Query: 116 QMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
D + +L KFNA + ++ L +E ++L + +G+ ++ N+
Sbjct: 156 DKDTVSHVLGKFNAAETQLMEQVLTFVIECVELSIQQGVEKAMNRCNS 203
>gi|310657788|ref|YP_003935509.1| peptidyl-tRNA hydrolase [[Clostridium] sticklandii]
gi|308824566|emb|CBH20604.1| peptidyl-tRNA hydrolase [[Clostridium] sticklandii]
Length = 186
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 87/162 (53%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D A GI +N + K+ G+G +G V+L KPQTYMNLSGE+ +YK ++
Sbjct: 26 VDVLAGQLGIKVNKLKFKSLIGEGNIGSEKVVLIKPQTYMNLSGEAVMQAINFYKPDHDK 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+ V +DD+ L G LR+R G G HNG+++++ G +F R RIG+ +P D +
Sbjct: 86 IFVIYDDIDLDVGRLRIRKKGSGGTHNGMRNII-YLTGFDDFPRFRIGVSKPKNGQDLAS 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
F+ FN + + A+ + + L + + + ++ +N
Sbjct: 145 FVTSGFNKDEIKPLCEAIDNAADAIVLAIKEDIDKAMNKYNV 186
>gi|254491100|ref|ZP_05104281.1| peptidyl-tRNA hydrolase [Methylophaga thiooxidans DMS010]
gi|224463613|gb|EEF79881.1| peptidyl-tRNA hydrolase [Methylophaga thiooxydans DMS010]
Length = 190
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 82/132 (62%), Gaps = 1/132 (0%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V L KP T+MN SG+S LA +YK+PL +LV HD++ L GV+RL+ +GGHGGHNGL+
Sbjct: 59 VYLLKPLTFMNRSGQSVAALANFYKIPLQNILVVHDELDLEPGVVRLKRDGGHGGHNGLR 118
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
++ G + F R R+GIG P ++L K + R++++TA+ +++L +LS
Sbjct: 119 DIIAQ-TGGKNFLRCRLGIGHPGHSKLVSDYVLSKPSPTDRQQVETAIDNVLQILPDVLS 177
Query: 152 KGLTESARHFNT 163
L ++ ++
Sbjct: 178 DKLDKAMNWLHS 189
>gi|428304795|ref|YP_007141620.1| peptidyl-tRNA hydrolase [Crinalium epipsammum PCC 9333]
gi|428246330|gb|AFZ12110.1| peptidyl-tRNA hydrolase [Crinalium epipsammum PCC 9333]
Length = 217
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 92/163 (56%), Gaps = 3/163 (1%)
Query: 2 IDAFAESQGISMN-TVHCKATFGQGFVGDAP-VLLAKPQTYMNLSGESTGPLAAYYKLPL 59
+DA + S IS++ +A FG+G + L KP TYMNLSG++ +YKLP
Sbjct: 46 VDALSRSWQISLSENRKFQALFGEGRSPKGEKIRLIKPLTYMNLSGQAIRAAIDWYKLPP 105
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
VLV +DDM LP G LR+R +G GGHNG+KS + + G F RLRIGIGR +
Sbjct: 106 ESVLVIYDDMDLPVGRLRMRLSGSAGGHNGMKSAIAHL-GTDNFPRLRIGIGRASSEKGS 164
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+ +L KF+A I L+ + +++ + +G+ ++ +N
Sbjct: 165 VSHVLGKFSADENPLISEVLKIVSDAVEISIKQGVEKAMNLYN 207
>gi|307111354|gb|EFN59588.1| hypothetical protein CHLNCDRAFT_132968 [Chlorella variabilis]
Length = 301
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 93/157 (59%), Gaps = 1/157 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++ A A ++++ A + + VLLAKP T MNLSGE+ LA +Y +P
Sbjct: 72 VVAAVARLLDVAVDRFQANAEVARSRLAGKSVLLAKPLTTMNLSGEAVAGLADFYHIPPE 131
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
RVLV +DD+ LP G +RLR GG GGH G+KSV + +G+ F R+R+GIGRPP
Sbjct: 132 RVLVVYDDLDLPTGTVRLRPRGGPGGHGGMKSVAAHLQGD-NFPRIRLGIGRPPAGTTVL 190
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 157
+LQ F R ++D A+Q+ V V++ +LS GL +
Sbjct: 191 DHVLQDFGEAERLQVDAAVQQAVGVIRAVLSVGLERA 227
>gi|335046927|ref|ZP_08539950.1| aminoacyl-tRNA hydrolase [Oribacterium sp. oral taxon 108 str.
F0425]
gi|333760713|gb|EGL38270.1| aminoacyl-tRNA hydrolase [Oribacterium sp. oral taxon 108 str.
F0425]
Length = 208
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 91/165 (55%), Gaps = 6/165 (3%)
Query: 1 MIDAFAE---SQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL 57
+IDA E +G+ H F + +G V++ KP TYMNLSG+S P+A +YK+
Sbjct: 44 VIDALLEMLGGKGLESTKFH--GAFTKLRIGTEEVVILKPLTYMNLSGDSIAPMANFYKI 101
Query: 58 PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQM 117
P +VLV D++ L G +R+R G GGHNGLKS++ G +F R+R+G+G +
Sbjct: 102 PAEQVLVVSDEISLSPGSIRIRKKGSAGGHNGLKSIIARL-GTEDFPRIRLGVGEKRERE 160
Query: 118 DPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
D A +L F +R++ A + + +++G+ ++ +N
Sbjct: 161 DLAAHVLGHFEKEDEKRMEEAYTDAAKACICTVTEGIEKAMNLYN 205
>gi|238855037|ref|ZP_04645365.1| aminoacyl-tRNA hydrolase [Lactobacillus jensenii 269-3]
gi|260664821|ref|ZP_05865672.1| peptidyl-tRNA hydrolase [Lactobacillus jensenii SJ-7A-US]
gi|313472623|ref|ZP_07813112.1| aminoacyl-tRNA hydrolase [Lactobacillus jensenii 1153]
gi|238832281|gb|EEQ24590.1| aminoacyl-tRNA hydrolase [Lactobacillus jensenii 269-3]
gi|239529424|gb|EEQ68425.1| aminoacyl-tRNA hydrolase [Lactobacillus jensenii 1153]
gi|260561304|gb|EEX27277.1| peptidyl-tRNA hydrolase [Lactobacillus jensenii SJ-7A-US]
Length = 185
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 86/150 (57%), Gaps = 2/150 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D + G+S+N + F + + V+L +PQTYMN SG S +A ++K+ +
Sbjct: 26 LDNYMAKNGLSLNQNKFEGLFTKEKIAGEDVILLEPQTYMNESGRSISQVANFFKIDPSD 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+L+ DDM +P G +R+R NG GGHNG+KS++ + G +F RL+IGI R P +
Sbjct: 86 ILIIQDDMDMPIGKIRIRANGKSGGHNGIKSIIRDL-GTEKFNRLKIGI-RHPENTTVVS 143
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLS 151
++L FN ++ +DTA ++L +S
Sbjct: 144 WVLTPFNNEQQKLMDTAFSTSEDILADFIS 173
>gi|257438136|ref|ZP_05613891.1| aminoacyl-tRNA hydrolase [Faecalibacterium prausnitzii A2-165]
gi|257199467|gb|EEU97751.1| aminoacyl-tRNA hydrolase [Faecalibacterium prausnitzii A2-165]
Length = 257
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 78/127 (61%), Gaps = 2/127 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D+ A GIS++ + +GQG V V+L KP TYMNLSG+S PLA ++K+P +
Sbjct: 96 LDSLAGKWGISVSKTKFQGLWGQGEVDGHKVVLLKPLTYMNLSGDSIAPLAGFFKIPADH 155
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIG-RPPGQMDPK 120
V+V DD+ G LR+R +G GGHNGLKS++ G F R+RIG+G +P D
Sbjct: 156 VIVLCDDITQAPGKLRIRPSGSAGGHNGLKSIIARL-GGENFPRIRIGVGAKPRPDYDLA 214
Query: 121 AFLLQKF 127
++L KF
Sbjct: 215 DWVLGKF 221
>gi|260577724|ref|ZP_05845659.1| aminoacyl-tRNA hydrolase [Corynebacterium jeikeium ATCC 43734]
gi|258604119|gb|EEW17361.1| aminoacyl-tRNA hydrolase [Corynebacterium jeikeium ATCC 43734]
Length = 209
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 69/96 (71%), Gaps = 1/96 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+LA+P+T+MN+SG LAA++K+P ++V +DD+ G ++LR +GG GHNGLK
Sbjct: 88 VVLAQPRTFMNVSGGPVQQLAAFFKIPAENIIVAYDDLEGDPGAVKLRQSGGDKGHNGLK 147
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKF 127
S+ + G +++ RL GIGRPPG+MDP A++L+ F
Sbjct: 148 SITKSL-GTKDYWRLSCGIGRPPGRMDPAAYVLKPF 182
>gi|389855717|ref|YP_006357960.1| peptidyl-tRNA hydrolase [Streptococcus suis ST1]
gi|353739435|gb|AER20442.1| peptidyl-tRNA hydrolase [Streptococcus suis ST1]
Length = 189
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 89/164 (54%), Gaps = 3/164 (1%)
Query: 1 MIDAFAESQGISMNTVHC-KATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPL 59
++D A+ + ++ N +A F+ + L KP T+MN SG++ L YY L
Sbjct: 26 LLDKIAKRENVTFNQDKIFQADIATTFIDGEKIYLVKPTTFMNESGKAVHALMTYYGLDA 85
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
+LV +DD+ + G +R R G GGHNG+KS++ + G +EF R++IGIGRP G+M
Sbjct: 86 TDILVAYDDLDMAVGKIRFRQKGSAGGHNGIKSIVKHI-GTQEFDRIKIGIGRPKGKMSV 144
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA-RHFN 162
+L F+ R ID AL + + + + L + ++ R FN
Sbjct: 145 VNHVLSGFDIEDRIEIDLALDKLDKAVNVYLEEDDFDTVMRKFN 188
>gi|403732120|ref|ZP_10949630.1| peptidyl-tRNA hydrolase [Gordonia rhizosphera NBRC 16068]
gi|403201948|dbj|GAB93961.1| peptidyl-tRNA hydrolase [Gordonia rhizosphera NBRC 16068]
Length = 188
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 89/136 (65%), Gaps = 4/136 (2%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
VL+AKP+TYMN SG GPLA +Y + + ++V HD++ + G++RL+ GG GGHNGL+
Sbjct: 57 VLVAKPRTYMNESGRQIGPLAKFYSVKPDDLIVLHDELDIDFGLVRLKRGGGEGGHNGLR 116
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ + G R++ R+R+GIGRPPG+ DP F+L+ F AR +D + G + +LL++
Sbjct: 117 SISQSL-GTRDYLRVRLGIGRPPGRQDPADFVLKPFPTSARADVDLLITHGCDAAELLVA 175
Query: 152 KGLTESARHFNTIQKY 167
GL + NT+ +
Sbjct: 176 HGLEPAQ---NTVHAW 188
>gi|417643151|ref|ZP_12293212.1| aminoacyl-tRNA hydrolase [Staphylococcus warneri VCU121]
gi|445060521|ref|YP_007385925.1| peptidyl-tRNA hydrolase [Staphylococcus warneri SG1]
gi|330686062|gb|EGG97684.1| aminoacyl-tRNA hydrolase [Staphylococcus epidermidis VCU121]
gi|443426578|gb|AGC91481.1| peptidyl-tRNA hydrolase [Staphylococcus warneri SG1]
Length = 190
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 89/167 (53%), Gaps = 6/167 (3%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID E +++ K + + VLL +P T MNLSGE+ PL YY + ++
Sbjct: 25 VIDYILERHNFTLDKQKFKGAYTIERMNGDKVLLIEPMTMMNLSGEAVAPLMDYYNIDVD 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ L G +RLR G GGHNG+KS++ G +F R+RIG+GRP M
Sbjct: 85 DLIVLYDDLDLEQGQVRLRQKGSAGGHNGMKSIIKML-GTDQFKRIRIGVGRPTNGMSVP 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKY 167
++LQ+F+ ++ ++ ++ + E++R N + +Y
Sbjct: 144 DYVLQRFSKEEMTTMEKVIEHSANAVEAFI-----ETSRFDNVMNEY 185
>gi|428310537|ref|YP_007121514.1| peptidyl-tRNA hydrolase [Microcoleus sp. PCC 7113]
gi|428252149|gb|AFZ18108.1| peptidyl-tRNA hydrolase [Microcoleus sp. PCC 7113]
Length = 206
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 90/164 (54%), Gaps = 5/164 (3%)
Query: 2 IDAFAESQGISMNT---VHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLP 58
+DA A++ IS + GQG GD V L KP TYMN SG++ +YKLP
Sbjct: 38 VDALAKTWQISWSENRRFQALIGEGQGANGD-KVRLLKPLTYMNRSGQAIRSATDWYKLP 96
Query: 59 LNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMD 118
L+ +DDM L G LRLR +G GGHNG+KS + + G + F RLRIGIG+ D
Sbjct: 97 PESTLIIYDDMDLSVGRLRLRLSGSAGGHNGMKSAIAHL-GTQNFPRLRIGIGKSRADKD 155
Query: 119 PKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+ +L KF+ + + LQ V+ ++L L +G+ ++ +N
Sbjct: 156 SVSHVLGKFSPEETQIMSEVLQLVVDAVELALKQGVEKAMSLYN 199
>gi|411003251|ref|ZP_11379580.1| peptidyl-tRNA hydrolase [Streptomyces globisporus C-1027]
Length = 197
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 80/132 (60%), Gaps = 2/132 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+L KP +YMNLSG L +YK+P + V+ HD++ + G LRL+ GG GHNGLK
Sbjct: 68 VVLVKPMSYMNLSGGPVTALRDFYKVPTDHVVAVHDELDVDYGSLRLKLGGGDNGHNGLK 127
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ ++ R+R GIGRPPG+M F+L+ F++ R+ ++ + + ++ LL+
Sbjct: 128 SMTKAM--GPDYHRVRFGIGRPPGRMQVADFVLKDFSSTERKELEFLVDRSADAVECLLA 185
Query: 152 KGLTESARHFNT 163
+GL + +N+
Sbjct: 186 EGLERAQSAYNS 197
>gi|406915161|gb|EKD54269.1| hypothetical protein ACD_60C00100G0006 [uncultured bacterium]
Length = 193
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 76/124 (61%), Gaps = 2/124 (1%)
Query: 37 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 96
P T+MN+SG S A YYK+ +LV HD++ +P G +RL+ +GGHGGHNGL+ ++
Sbjct: 65 PATFMNVSGTSVNTYAKYYKILPEDILVAHDEIDIPVGDIRLKFDGGHGGHNGLRDIIQC 124
Query: 97 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 156
G +F RLRIG+GRP D ++L+ RE+ID+ALQ +L LL KG +
Sbjct: 125 M-GTNKFHRLRIGVGRPLRSKDVVDYVLKPPKKTEREKIDSALQNAFCILPDLL-KGEFQ 182
Query: 157 SARH 160
A H
Sbjct: 183 KAMH 186
>gi|297587542|ref|ZP_06946186.1| aminoacyl-tRNA hydrolase [Finegoldia magna ATCC 53516]
gi|297574231|gb|EFH92951.1| aminoacyl-tRNA hydrolase [Finegoldia magna ATCC 53516]
Length = 190
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 88/151 (58%), Gaps = 5/151 (3%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ I +N + K+ G+GF+G+ V+L KP TYMN SG++ YY L
Sbjct: 25 VIDDLAKKLNIKVNKLKFKSLIGEGFIGNEKVILMKPSTYMNDSGKAILDCFNYYNLSAE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V DD+ +P G +R++ G G HNGLKS++ + ++FAR+++ +G+ D K
Sbjct: 85 NLIVICDDIDIPFGTIRIKKKGSAGTHNGLKSIIYLIQS-QDFARIKVSVGQNDNNYDLK 143
Query: 121 AFLLQKFN----AIARERIDTALQEGVEVLK 147
F+L +F+ + ++ ID + +++++
Sbjct: 144 DFVLSQFSKKEFEVLKKEIDMSSDACIKIVE 174
>gi|68536581|ref|YP_251286.1| peptidyl-tRNA hydrolase [Corynebacterium jeikeium K411]
gi|68264180|emb|CAI37668.1| pthA [Corynebacterium jeikeium K411]
Length = 209
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 69/96 (71%), Gaps = 1/96 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+LA+P+T+MN+SG LAA++K+P ++V +DD+ G ++LR +GG GHNGLK
Sbjct: 88 VVLAQPRTFMNVSGGPVQQLAAFFKIPAENIIVAYDDLEGDPGAVKLRQSGGDKGHNGLK 147
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKF 127
S+ + G +++ RL GIGRPPG+MDP A++L+ F
Sbjct: 148 SITKSL-GTKDYWRLSCGIGRPPGRMDPAAYVLKPF 182
>gi|339449334|ref|ZP_08652890.1| peptidyl-tRNA hydrolase [Lactobacillus fructivorans KCTC 3543]
Length = 185
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 85/151 (56%), Gaps = 2/151 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D FA+ GI +N A +G G V V++ KP T MN SG + PL +YKL L+
Sbjct: 25 VVDQFADQNGIEINKQKLDAMYGTGIVNGEKVMVVKPTTMMNDSGRAVHPLMQFYKLDLD 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+++ +DDM LP G +RLR++G GGHNG+KS++ + G +F R+++G P +
Sbjct: 85 DLVIVYDDMDLPVGRIRLRNHGSAGGHNGIKSMIAHL-GTDQFNRIKVGTSHPKRE-SVV 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
++L KF+ R A V+ L +S
Sbjct: 143 NYVLGKFSLEQRAPFGEAKDHAVKALNEWVS 173
>gi|336112718|ref|YP_004567485.1| peptidyl-tRNA hydrolase [Bacillus coagulans 2-6]
gi|335366148|gb|AEH52099.1| peptidyl-tRNA hydrolase [Bacillus coagulans 2-6]
Length = 185
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 84/152 (55%), Gaps = 1/152 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+++ AE K + V VLL KP TYMNLSGES YY+L
Sbjct: 25 VVNLLAERLQAPFKQSKFKGLCAETTVNGEKVLLLKPMTYMNLSGESVKAAMDYYRLGTG 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV +DD+ LP G +RLR G GGHNG+KS++++ G +EF R+RIGIGRP +
Sbjct: 85 DLLVVYDDLDLPPGKIRLRQKGSAGGHNGIKSIIHHL-GTQEFNRIRIGIGRPDRDIYMP 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSK 152
++L +F+ R ++ A+++ + + L K
Sbjct: 144 DYVLGRFSKEDRVKMQLAVEKSADACEAWLEK 175
>gi|390933856|ref|YP_006391361.1| Peptidyl-tRNA hydrolase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389569357|gb|AFK85762.1| Peptidyl-tRNA hydrolase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 190
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 92/162 (56%), Gaps = 3/162 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID+ ++ I++ + K+ G+G ++L KPQT+MN SGE+ + +YKLPL+
Sbjct: 25 VIDSLSKKLDIAVKKIKFKSLIGEGLYKGEKIVLQKPQTFMNSSGEAVYDIVDFYKLPLS 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD L G +R+R G GGHNG+KS++ + +F R+R+GIG+P G M
Sbjct: 85 NLIVVYDDKDLDVGKIRVRKKGSAGGHNGMKSII-YILNSEDFLRVRLGIGKPKGDM--I 141
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+L +F + ++ ++ + + ++ G+ + +N
Sbjct: 142 EHVLGRFEESDMDIVENSIDNAAKAVLDIIENGVEHAMNLYN 183
>gi|297193931|ref|ZP_06911329.1| peptidyl-tRNA hydrolase [Streptomyces pristinaespiralis ATCC 25486]
gi|197720294|gb|EDY64202.1| peptidyl-tRNA hydrolase [Streptomyces pristinaespiralis ATCC 25486]
Length = 197
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 79/132 (59%), Gaps = 2/132 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+LAKP +YMNLSG L +YK+P + ++ HD++ + G LRL+ GG GHNGLK
Sbjct: 68 VILAKPMSYMNLSGGPVTALRDFYKVPTSNIVAVHDELDIDYGTLRLKLGGGDNGHNGLK 127
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ ++ R+R GIGRPPG+M F+L+ F++ R+ +D + + ++ L+
Sbjct: 128 SMTKAM--GPDYHRVRFGIGRPPGRMQVADFVLKDFSSAERKELDYFVDRAADAVECLVI 185
Query: 152 KGLTESARHFNT 163
GL + +N+
Sbjct: 186 DGLERAQGTYNS 197
>gi|312623039|ref|YP_004024652.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor kronotskyensis 2002]
gi|312203506|gb|ADQ46833.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor kronotskyensis 2002]
Length = 189
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 86/161 (53%), Gaps = 3/161 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ ++ + K G VLL KP TYMN SGES +YK+ +
Sbjct: 27 IDYLAQLFNTKVDKIKFKGLVGSFEYAGKKVLLLKPMTYMNASGESIIEAVNFYKIKTEK 86
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DD+ GV+++R G GGHNG+KS++ G EF R+RIGIG P + D
Sbjct: 87 LIVIYDDIAFDVGVVKMRKKGSDGGHNGVKSIIQCL-GTEEFPRIRIGIGVP--KYDMVK 143
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F +E+I A+++ +K+LL + + + N
Sbjct: 144 YVLSEFEDGEKEKIFRAIEKASNGIKILLESDIDRAMNYIN 184
>gi|293115400|ref|ZP_05791311.2| aminoacyl-tRNA hydrolase [Butyrivibrio crossotus DSM 2876]
gi|292810128|gb|EFF69333.1| aminoacyl-tRNA hydrolase [Butyrivibrio crossotus DSM 2876]
Length = 198
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 91/164 (55%), Gaps = 1/164 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+IDA A ISM K G+G +G V+L KP TYMNLSGE P+ YYK+ +
Sbjct: 36 IIDALAGRFNISMTEQKHKGLIGKGIIGGNKVILVKPLTYMNLSGECIRPVCDYYKVDPS 95
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+V DD+ L G +R+R G GGHNG+KS+++ G F RL+ G+G P QMD
Sbjct: 96 ECIVAFDDISLEPGKIRIRKKGSAGGHNGIKSIISCL-GTDAFPRLKFGVGDKPKQMDLA 154
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTI 164
++L +FN+ + L++ ++ ++++G + +N +
Sbjct: 155 DYVLGRFNSEDEAIVAKELEKACNAIECMVTEGYDAAMNKYNGV 198
>gi|365865380|ref|ZP_09405031.1| peptidyl-tRNA hydrolase [Streptomyces sp. W007]
gi|364005213|gb|EHM26302.1| peptidyl-tRNA hydrolase [Streptomyces sp. W007]
Length = 204
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 81/132 (61%), Gaps = 2/132 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+L KP +YMNLSG L +YK+P + ++ HD++ + G+LRL+ GG GHNGLK
Sbjct: 75 VILVKPMSYMNLSGGPVTALRDFYKVPTDHIVAVHDELDVDYGMLRLKLGGGDNGHNGLK 134
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ ++ R+R GIGRPPG+M F+L+ F++ R+ ++ + + ++ LL+
Sbjct: 135 SMTKAM--GPDYHRVRFGIGRPPGRMQVADFVLKDFSSTERKELEFLVDRSADSVECLLA 192
Query: 152 KGLTESARHFNT 163
+GL + +N+
Sbjct: 193 EGLERAQSAYNS 204
>gi|227504130|ref|ZP_03934179.1| peptidyl-tRNA hydrolase [Corynebacterium striatum ATCC 6940]
gi|227199262|gb|EEI79310.1| peptidyl-tRNA hydrolase [Corynebacterium striatum ATCC 6940]
Length = 198
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 85/161 (52%), Gaps = 3/161 (1%)
Query: 3 DAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRV 62
D AES + T V D PVL+ + T+MNLSG+ PLA +P RV
Sbjct: 39 DLLAESGELLQPVAGHSLTAAPLNVADTPVLVVRSATFMNLSGDPIAPLAQQLGIPAERV 98
Query: 63 LVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAF 122
LV HD++ LP +R++ G GHNGLKS+ G R++ R+RIGIGRPP +
Sbjct: 99 LVIHDELDLPPNKIRIKVGGNENGHNGLKSLTERL-GTRDYPRVRIGIGRPPKGSSIPDY 157
Query: 123 LLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
+L +A A D A++ + ++L++S G+ + ++
Sbjct: 158 VLGPIDADA--GFDAAIETAADAVRLIVSSGIQSAQNEIHS 196
>gi|443315580|ref|ZP_21045063.1| peptidyl-tRNA hydrolase [Leptolyngbya sp. PCC 6406]
gi|442784815|gb|ELR94672.1| peptidyl-tRNA hydrolase [Leptolyngbya sp. PCC 6406]
Length = 213
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 95/167 (56%), Gaps = 6/167 (3%)
Query: 1 MIDAFAESQGISMNT-VHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPL 59
++D A +++ + + +G+G+ V L KPQTYMN SG+S + +YK+
Sbjct: 37 VVDTLAHRWQVALASQAKFQGIYGEGWAAGHKVGLLKPQTYMNRSGQSVRAVLDWYKVEP 96
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGR----PPG 115
VLV +DDM L G LRLR +G GGHNG+KS++ + G ++F RLR+GIGR PG
Sbjct: 97 EAVLVIYDDMDLATGRLRLRLSGSAGGHNGMKSLIAHL-GGQDFPRLRLGIGRTATGEPG 155
Query: 116 QMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
A +L + +A R ++ + +V+++ L +G+ ++ FN
Sbjct: 156 DRAVVAHVLGRPSAAERAHMEEVVTLAADVVEMALREGVEKAMSRFN 202
>gi|332654762|ref|ZP_08420504.1| aminoacyl-tRNA hydrolase [Ruminococcaceae bacterium D16]
gi|332516105|gb|EGJ45713.1| aminoacyl-tRNA hydrolase [Ruminococcaceae bacterium D16]
Length = 197
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 86/161 (53%), Gaps = 2/161 (1%)
Query: 3 DAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRV 62
D E + + + KA + VL+ KP TYMNLSGE+ P A +YK+P +
Sbjct: 37 DQLGERYRLPIQKLKFKALTNVFTISGEKVLVMKPVTYMNLSGEAVRPAADFYKIPPEHI 96
Query: 63 LVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPP-GQMDPKA 121
+V DD L G LR+R +G GGHNGLKS++ + G +F R+R+G+G+ P D
Sbjct: 97 IVISDDTALDVGKLRIRKSGSAGGHNGLKSIIQHL-GTDQFPRIRVGVGKKPHPDYDLAD 155
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L KF R+ I A++ + ++ + +G + FN
Sbjct: 156 WVLGKFQGEDRKAIAAAVERCADAVECYIKEGPDRAMNKFN 196
>gi|406938635|gb|EKD71826.1| hypothetical protein ACD_46C00088G0002 [uncultured bacterium]
Length = 192
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 86/142 (60%), Gaps = 2/142 (1%)
Query: 22 FGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHN 81
+GQ L P T+MNLSG+S AY+KL +L+ HDD+ LP G ++L+ +
Sbjct: 51 YGQAKFDHRACHLLIPTTFMNLSGQSVRACMAYHKLTPANILIAHDDVDLPVGTIKLKLD 110
Query: 82 GGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQE 141
GG GGHNGLK ++ + ++F RLRIG+GRP D ++L+K + +++I+ ALQ
Sbjct: 111 GGDGGHNGLKDIIRHLN-TKQFYRLRIGVGRPT-HGDVADYVLEKPSKADKQKIEQALQS 168
Query: 142 GVEVLKLLLSKGLTESARHFNT 163
++VL ++++ + ++ +T
Sbjct: 169 AIDVLPMIVAGDIQKAMMTLHT 190
>gi|409392938|ref|ZP_11244452.1| peptidyl-tRNA hydrolase [Gordonia rubripertincta NBRC 101908]
gi|403197238|dbj|GAB87686.1| peptidyl-tRNA hydrolase [Gordonia rubripertincta NBRC 101908]
Length = 189
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 103/167 (61%), Gaps = 7/167 (4%)
Query: 3 DAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
D +S G VH K A + +G VL+AKP+ YMN SG GPLA +Y +
Sbjct: 28 DGLVDSAGERWK-VHKKSGAEVAEVRLGGQSVLVAKPRVYMNESGRQIGPLAKFYSVAPT 86
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V HD++ + G++RL+ GG GGHNGL+S+ + G R++ R+R+GIGRPPG+ DP
Sbjct: 87 DLIVVHDELDIDFGLVRLKRGGGEGGHNGLRSI-SQVMGTRDYLRVRMGIGRPPGRQDPA 145
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKY 167
F+L+ F + R ++ ++ G + ++LL+S+ L ESA+ NT+ +
Sbjct: 146 DFVLKPFPSADRAEVELMIRNGCDAVELLVSQDL-ESAQ--NTVHAW 189
>gi|154507724|ref|ZP_02043366.1| hypothetical protein ACTODO_00206 [Actinomyces odontolyticus ATCC
17982]
gi|153797358|gb|EDN79778.1| aminoacyl-tRNA hydrolase [Actinomyces odontolyticus ATCC 17982]
Length = 200
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 84/132 (63%), Gaps = 1/132 (0%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+LA+ +YMN SG LA ++K+ +R+LV HDDM LP LRL+ GG GGHNGLK
Sbjct: 68 VILARSDSYMNTSGGPISALATFHKIDPSRILVIHDDMDLPAHTLRLKVGGGEGGHNGLK 127
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ + G R++ARLRIG+GRPPG+MDP ++L + R D ++ +V++ +++
Sbjct: 128 SLSQHL-GTRDYARLRIGVGRPPGRMDPADYVLATLPSKERSEWDVTFEQAADVVEDIVT 186
Query: 152 KGLTESARHFNT 163
KG + +T
Sbjct: 187 KGFAPTQMALHT 198
>gi|94987180|ref|YP_595113.1| peptidyl-tRNA hydrolase [Lawsonia intracellularis PHE/MN1-00]
gi|442556018|ref|YP_007365843.1| peptidyl-tRNA hydrolase [Lawsonia intracellularis N343]
gi|119390955|sp|Q1MQD5.1|PTH_LAWIP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|94731429|emb|CAJ54792.1| Peptidyl-tRNA hydrolase [Lawsonia intracellularis PHE/MN1-00]
gi|441493465|gb|AGC50159.1| peptidyl-tRNA hydrolase [Lawsonia intracellularis N343]
Length = 201
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 61/82 (74%), Gaps = 1/82 (1%)
Query: 33 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 92
LLAKPQTYMNLSGE+ PL +Y + + +LV HD++ LP G ++L+ GG GHNGLKS
Sbjct: 61 LLAKPQTYMNLSGEAIHPLVEWYNITKDNLLVIHDELDLPIGKMKLQQGGGTAGHNGLKS 120
Query: 93 VMNNFRGNREFARLRIGIGRPP 114
+++N G ++F RLRIGIGR P
Sbjct: 121 IIHNL-GTKDFYRLRIGIGRSP 141
>gi|217967892|ref|YP_002353398.1| Aminoacyl-tRNA hydrolase [Dictyoglomus turgidum DSM 6724]
gi|217336991|gb|ACK42784.1| Aminoacyl-tRNA hydrolase [Dictyoglomus turgidum DSM 6724]
Length = 193
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 80/142 (56%), Gaps = 3/142 (2%)
Query: 21 TFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRH 80
TFG+ + + V L KPQTYMNLSG + +LV HDD+ LP G +R++
Sbjct: 49 TFGK--ISNTKVYLVKPQTYMNLSGIGVKEFIEKFAFAPEELLVIHDDLDLPIGTIRIKF 106
Query: 81 NGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQ 140
NG GGHNG+KS++ + F RLRIGIG+P + ++L KFN + I+ LQ
Sbjct: 107 NGKDGGHNGIKSIIKEINTSN-FYRLRIGIGKPQDKNQIVEYVLGKFNEDELKTIEKILQ 165
Query: 141 EGVEVLKLLLSKGLTESARHFN 162
++++ ++ +G ++ +N
Sbjct: 166 SSHQIIETIIKEGWDKAQNLYN 187
>gi|302871261|ref|YP_003839897.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor obsidiansis OB47]
gi|302574120|gb|ADL41911.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor obsidiansis OB47]
Length = 207
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 86/161 (53%), Gaps = 3/161 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ ++ + K G VLL KP TYMN SGES +YK+ +
Sbjct: 45 IDYLAQFFNTKVDKIKFKGLVGSFEYAGKKVLLLKPMTYMNASGESIIEAVNFYKIKPEK 104
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DD+ GV+++R G GGHNG+KS++ G EF R+RIGIG P + D
Sbjct: 105 LIVIYDDIAFDVGVVKMRKKGSDGGHNGVKSIIQRL-GTEEFPRIRIGIGVP--KYDMVK 161
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F +E+I A+++ +K+LL + + + N
Sbjct: 162 YVLSEFEDGEKEKIFRAIEKASNGIKILLESDIDRAMNYIN 202
>gi|269125254|ref|YP_003298624.1| peptidyl-tRNA hydrolase [Thermomonospora curvata DSM 43183]
gi|268310212|gb|ACY96586.1| peptidyl-tRNA hydrolase [Thermomonospora curvata DSM 43183]
Length = 206
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 97/157 (61%), Gaps = 1/157 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A G +A +G + V+LAKP+++MN SG L ++K+PL
Sbjct: 41 VVDVLAGRMGGRFKAHKARAEVLEGRLAGRRVVLAKPRSFMNDSGGPVARLRDFFKVPLE 100
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
R+++ HD++ +P G +RL+ GG GGHNGL+S+ + G ++ R+R G+GRPPG+MD
Sbjct: 101 RIVIVHDELDIPYGAVRLKQGGGAGGHNGLRSISKSL-GAPDYLRVRFGVGRPPGRMDAA 159
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 157
AF+L+ F+A R ++ LQ + +++LL++GL +
Sbjct: 160 AFVLRDFSAAERRDLELHLQVAADAVEMLLTQGLQAA 196
>gi|365133371|ref|ZP_09342706.1| peptidyl-tRNA hydrolase [Subdoligranulum sp. 4_3_54A2FAA]
gi|363615647|gb|EHL67106.1| peptidyl-tRNA hydrolase [Subdoligranulum sp. 4_3_54A2FAA]
Length = 195
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 87/162 (53%), Gaps = 3/162 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D AE G+ + A G G VLL KPQT+MNLSG++ A +YK+P R
Sbjct: 35 LDHVAEKWGVRVTKAKFDALTGTGTAAGVKVLLMKPQTFMNLSGDAVRKAADFYKVPPER 94
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIG-RPPGQMDPK 120
++V DD+ L G LR+R G GGHNG+KS++ N ++F R++IG+G +P + D
Sbjct: 95 IIVLFDDISLAPGRLRIRKTGSAGGHNGIKSIIGNI--GQDFPRVKIGVGEKPRPEYDLA 152
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L + ++ ++ + L+L++ + +N
Sbjct: 153 DWVLSRLTQAEKKAVEARYDDICGALELMMKGQFDTAMSRYN 194
>gi|386585209|ref|YP_006081611.1| peptidyl-tRNA hydrolase [Streptococcus suis D12]
gi|353737355|gb|AER18363.1| peptidyl-tRNA hydrolase [Streptococcus suis D12]
Length = 190
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 1 MIDAFAESQGISMNTVHCK---ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL 57
++D A+ + ++ N H K A F+ + L KP T+MN SG++ L YY L
Sbjct: 26 LLDKIAKRENVTFN--HDKIFQADIATTFIDGEKIYLVKPTTFMNESGKAVHALMTYYGL 83
Query: 58 PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQM 117
+LV +DD+ + G +R R G GGHNG+KS++ + G +EF R++IGIGRP G+M
Sbjct: 84 DATDILVAYDDLDMAVGKIRFRQKGSAGGHNGIKSIVKHI-GTQEFDRIKIGIGRPKGKM 142
Query: 118 DPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA-RHFN 162
+L F+ R ID AL + + + + L + ++ R FN
Sbjct: 143 SVVNHVLSGFDIEDRIEIDLALDKLDKAVNVYLEEDDFDTVMRKFN 188
>gi|333394473|ref|ZP_08476292.1| peptidyl-tRNA hydrolase [Lactobacillus coryniformis subsp.
coryniformis KCTC 3167]
Length = 188
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 83/146 (56%), Gaps = 2/146 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A + ++ + +A + F D V L KPQT+MN SG + PL YY++ L
Sbjct: 26 IDRMAAAHQVTFSHNQFEANYATYFENDEKVYLVKPQTFMNDSGRAVKPLMTYYQIQLAE 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DDM L G LRLR +G GGHNG+KS++ +F +F R+RIG G P +
Sbjct: 86 LMVVYDDMDLVPGRLRLREHGSAGGHNGIKSLI-SFLQTSDFNRVRIGTGHPE-RRSVVD 143
Query: 122 FLLQKFNAIARERIDTALQEGVEVLK 147
++L F+ AR +D ++ +E L+
Sbjct: 144 WVLSPFSDEARPLVDRSIDTAIEALE 169
>gi|183598957|ref|ZP_02960450.1| hypothetical protein PROSTU_02399 [Providencia stuartii ATCC 25827]
gi|386745306|ref|YP_006218485.1| peptidyl-tRNA hydrolase [Providencia stuartii MRSN 2154]
gi|188021171|gb|EDU59211.1| aminoacyl-tRNA hydrolase [Providencia stuartii ATCC 25827]
gi|384481999|gb|AFH95794.1| peptidyl-tRNA hydrolase [Providencia stuartii MRSN 2154]
Length = 196
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 80/134 (59%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V L P T+MNLSG+S +A +Y++ + +LV HD++ LP GV +++ G +GGHNGLK
Sbjct: 60 VRLLVPTTFMNLSGKSVLAVANFYRINPDEILVAHDELDLPPGVAKMKLGGSNGGHNGLK 119
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
+ N F N F RLRIGIG P + F+L K A ++ ID A+ E + +LLS
Sbjct: 120 DIQNKFSNNPNFYRLRIGIGHPGDKNKVVGFVLGKPPASEQKLIDEAIDESLRCTDILLS 179
Query: 152 KGLTESARHFNTIQ 165
G+ ++ ++ +
Sbjct: 180 DGMDKAINRLHSFK 193
>gi|342215023|ref|ZP_08707692.1| aminoacyl-tRNA hydrolase [Veillonella sp. oral taxon 780 str.
F0422]
gi|341590129|gb|EGS33378.1| aminoacyl-tRNA hydrolase [Veillonella sp. oral taxon 780 str.
F0422]
Length = 192
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 83/146 (56%), Gaps = 5/146 (3%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++DA A+ + KA + VLL KPQT+MNLSGES GPL YYKL
Sbjct: 25 VVDAIADGVSHTPWREDYKAELCSCTIAGEKVLLVKPQTFMNLSGESVGPLMRYYKLTPE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V V +DDM LP G +R+R NG GGHNG+KS++++ G F R GIGRP +
Sbjct: 85 DVYVIYDDMDLPVGKIRIRPNGSAGGHNGIKSMISHL-GTDGFPHFRFGIGRPLPEWTVV 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVL 146
+L +F E+ DT +++GV+ +
Sbjct: 144 DHVLSRF---PEEQQDT-VKKGVKAM 165
>gi|83588952|ref|YP_428961.1| peptidyl-tRNA hydrolase [Moorella thermoacetica ATCC 39073]
gi|119390960|sp|Q2RMC1.1|PTH_MOOTA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|83571866|gb|ABC18418.1| peptidyl-tRNA hydrolase [Moorella thermoacetica ATCC 39073]
Length = 190
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 93/163 (57%), Gaps = 2/163 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A+ GI+++ +A GQG VG+ VLL KPQTYMN SG++ PLA +Y +
Sbjct: 28 VVDLLADDLGITLDRTREQALTGQGLVGNNRVLLVKPQTYMNNSGQAVAPLARWYGIAPE 87
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV HDD+ L G LRLR G GGH GL+S++ + G RL+IGIGRPP +
Sbjct: 88 AILVIHDDLDLAPGRLRLRRGGSSGGHRGLQSIITHL-GTTAVPRLKIGIGRPPLGQNVI 146
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKG-LTESARHFN 162
++L+ F+ E I L E + LL G + E+ FN
Sbjct: 147 DYVLKPFSEGDWELIRPVLLEAARAARFLLEGGSMDEAMNRFN 189
>gi|399523773|ref|ZP_10764379.1| aminoacyl-tRNA hydrolase [Atopobium sp. ICM58]
gi|398375191|gb|EJN52638.1| aminoacyl-tRNA hydrolase [Atopobium sp. ICM58]
Length = 200
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 85/132 (64%), Gaps = 1/132 (0%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+LA+ +YMN SG LA+++K+ +R+LV HDDM LP LRL+ GG GGHNGLK
Sbjct: 68 VILARSDSYMNTSGGPISALASFHKIEPSRILVIHDDMDLPAHTLRLKVGGGEGGHNGLK 127
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ + G R++ARLRIG+GRPPG+MDP ++L + R D ++ +V++ +++
Sbjct: 128 SLTQHL-GTRDYARLRIGVGRPPGRMDPADYVLAALPSKERPDWDVTFEQAADVVEDIVT 186
Query: 152 KGLTESARHFNT 163
KG + +T
Sbjct: 187 KGFAPTQMALHT 198
>gi|298530962|ref|ZP_07018363.1| peptidyl-tRNA hydrolase [Desulfonatronospira thiodismutans ASO3-1]
gi|298508985|gb|EFI32890.1| peptidyl-tRNA hydrolase [Desulfonatronospira thiodismutans ASO3-1]
Length = 216
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 79/130 (60%), Gaps = 1/130 (0%)
Query: 34 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 93
L KP TYMN SG++ +A + +LV HD++ LP G ++L+ GG GHNGL+S+
Sbjct: 79 LLKPMTYMNRSGKAVARVADRLNILAESILVVHDEVDLPLGRVKLKFGGGLAGHNGLRSI 138
Query: 94 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 153
++ G+R+FARLRIG+GRP Q+ ++LQKF + + +L V L+LL + G
Sbjct: 139 ADHL-GSRDFARLRIGVGRPEDQISLSEYVLQKFTPEEQNDLKDSLDRSVAALRLLFTHG 197
Query: 154 LTESARHFNT 163
+ +H N+
Sbjct: 198 KQPALQHINS 207
>gi|357040090|ref|ZP_09101880.1| Peptidyl-tRNA hydrolase [Desulfotomaculum gibsoniae DSM 7213]
gi|355357070|gb|EHG04849.1| Peptidyl-tRNA hydrolase [Desulfotomaculum gibsoniae DSM 7213]
Length = 191
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 89/162 (54%), Gaps = 2/162 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D AE ++ ++ GQG ++LAKPQTYMNLSG++ L +YKL
Sbjct: 26 VDRLAERLDTPVDRNFLRSLVGQGVWAGEKIILAKPQTYMNLSGQAVVALLNWYKLAPAD 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DD+ LP G LR+R G GGH GL S++ N G +F R+RIGIGRPP A
Sbjct: 86 LIVIYDDLDLPPGRLRIRDRGSAGGHRGLASII-NLLGTGDFIRVRIGIGRPPVPGPEVA 144
Query: 122 -FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L + + E I L+ V++ ++ G+ + FN
Sbjct: 145 DWVLARPASEDMEAIHRVLETVPGVVEEIVRAGVVSAMNKFN 186
>gi|146317669|ref|YP_001197381.1| peptidyl-tRNA hydrolase [Streptococcus suis 05ZYH33]
gi|146319858|ref|YP_001199569.1| peptidyl-tRNA hydrolase [Streptococcus suis 98HAH33]
gi|253750930|ref|YP_003024071.1| peptidyl-tRNA hydrolase [Streptococcus suis SC84]
gi|253752829|ref|YP_003025969.1| peptidyl-tRNA hydrolase [Streptococcus suis P1/7]
gi|253754654|ref|YP_003027794.1| peptidyl-tRNA hydrolase [Streptococcus suis BM407]
gi|386577009|ref|YP_006073414.1| Peptidyl-tRNA hydrolase [Streptococcus suis GZ1]
gi|386578987|ref|YP_006075392.1| peptidyl-tRNA hydrolase [Streptococcus suis JS14]
gi|386581054|ref|YP_006077458.1| peptidyl-tRNA hydrolase [Streptococcus suis SS12]
gi|386587288|ref|YP_006083689.1| peptidyl-tRNA hydrolase [Streptococcus suis A7]
gi|403060710|ref|YP_006648926.1| peptidyl-tRNA hydrolase [Streptococcus suis S735]
gi|166229459|sp|A4VYI0.1|PTH_STRS2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166229461|sp|A4VS92.1|PTH_STRSY RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|145688475|gb|ABP88981.1| Peptidyl-tRNA hydrolase [Streptococcus suis 05ZYH33]
gi|145690664|gb|ABP91169.1| Peptidyl-tRNA hydrolase [Streptococcus suis 98HAH33]
gi|251815219|emb|CAZ50783.1| peptidyl-tRNA hydrolase [Streptococcus suis SC84]
gi|251817118|emb|CAZ54839.1| peptidyl-tRNA hydrolase [Streptococcus suis BM407]
gi|251819074|emb|CAR44088.1| peptidyl-tRNA hydrolase [Streptococcus suis P1/7]
gi|292557471|gb|ADE30472.1| Peptidyl-tRNA hydrolase [Streptococcus suis GZ1]
gi|319757179|gb|ADV69121.1| peptidyl-tRNA hydrolase [Streptococcus suis JS14]
gi|353733200|gb|AER14210.1| peptidyl-tRNA hydrolase [Streptococcus suis SS12]
gi|354984449|gb|AER43347.1| peptidyl-tRNA hydrolase [Streptococcus suis A7]
gi|402808036|gb|AFQ99527.1| peptidyl-tRNA hydrolase [Streptococcus suis S735]
Length = 189
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 1 MIDAFAESQGISMNTVHCK---ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL 57
++D A+ + ++ N H K A F+ + L KP T+MN SG++ L YY L
Sbjct: 26 LLDKIAKRENVTFN--HDKIFQADIATTFIDGEKIYLVKPTTFMNESGKAVHALMTYYGL 83
Query: 58 PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQM 117
+LV +DD+ + G +R R G GGHNG+KS++ + G +EF R++IGIGRP G+M
Sbjct: 84 DATDILVAYDDLDMAVGKIRFRQKGSAGGHNGIKSIVKHI-GTQEFDRIKIGIGRPKGKM 142
Query: 118 DPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA-RHFN 162
+L F+ R ID AL + + + + L + ++ R FN
Sbjct: 143 SVVNHVLSGFDIEDRIEIDLALDKLDKAVNVYLEEDDFDTVMRKFN 188
>gi|172036669|ref|YP_001803170.1| peptidyl-tRNA hydrolase [Cyanothece sp. ATCC 51142]
gi|354554483|ref|ZP_08973787.1| peptidyl-tRNA hydrolase [Cyanothece sp. ATCC 51472]
gi|171698123|gb|ACB51104.1| peptidyl-tRNA hydrolase [Cyanothece sp. ATCC 51142]
gi|353553292|gb|EHC22684.1| peptidyl-tRNA hydrolase [Cyanothece sp. ATCC 51472]
Length = 204
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 99/170 (58%), Gaps = 13/170 (7%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFV--GDAP----VLLAKPQTYMNLSGESTGPLAAY 54
++D AE+ G+S + QG + G++P + L KP TYMN SG+S + +
Sbjct: 36 IVDILAETWGLSWK----ENRRFQGLIAEGNSPTYQKIYLLKPLTYMNRSGQSVRAVTDW 91
Query: 55 YKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPP 114
YKL VLV +DDM LP G +R+R +G GGHNG+KS++++ G + F RLRIGIG+
Sbjct: 92 YKLIATDVLVIYDDMDLPIGRMRMRLSGSAGGHNGMKSIISHL-GEQNFPRLRIGIGK-S 149
Query: 115 GQMDPK-AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
GQ+D + +L +F R+ +D V+ ++ L +G+ ++ FN+
Sbjct: 150 GQLDNTVSHVLGRFAPEERKIVDKTFPLVVDAIETSLKEGIEKAMSLFNS 199
>gi|182438174|ref|YP_001825893.1| peptidyl-tRNA hydrolase [Streptomyces griseus subsp. griseus NBRC
13350]
gi|178466690|dbj|BAG21210.1| putative peptidyl-tRNA hydrolase [Streptomyces griseus subsp.
griseus NBRC 13350]
Length = 204
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 80/132 (60%), Gaps = 2/132 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+L KP +YMNLSG L +YK+P + V+ HD++ + G+LRL+ GG GHNGLK
Sbjct: 75 VVLVKPMSYMNLSGGPVTALRDFYKVPTDHVVAVHDELDVDYGMLRLKLGGGDNGHNGLK 134
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ ++ R+R GIGRPPG+M F+L+ F++ R+ + + + ++ LL+
Sbjct: 135 SMTKAM--GPDYHRVRFGIGRPPGRMQVADFVLKDFSSTERKELAFLVDRSADAVECLLA 192
Query: 152 KGLTESARHFNT 163
+GL + +N+
Sbjct: 193 EGLERAQSAYNS 204
>gi|326778824|ref|ZP_08238089.1| peptidyl-tRNA hydrolase [Streptomyces griseus XylebKG-1]
gi|326659157|gb|EGE44003.1| peptidyl-tRNA hydrolase [Streptomyces griseus XylebKG-1]
Length = 197
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 80/132 (60%), Gaps = 2/132 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+L KP +YMNLSG L +YK+P + V+ HD++ + G+LRL+ GG GHNGLK
Sbjct: 68 VVLVKPMSYMNLSGGPVTALRDFYKVPTDHVVAVHDELDVDYGMLRLKLGGGDNGHNGLK 127
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ ++ R+R GIGRPPG+M F+L+ F++ R+ + + + ++ LL+
Sbjct: 128 SMTKAM--GPDYHRVRFGIGRPPGRMQVADFVLKDFSSTERKELAFLVDRSADAVECLLA 185
Query: 152 KGLTESARHFNT 163
+GL + +N+
Sbjct: 186 EGLERAQSAYNS 197
>gi|253580890|ref|ZP_04858152.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251847732|gb|EES75700.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 193
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 89/162 (54%), Gaps = 2/162 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PLN 60
+D E + V A +G+ +G V+L KP ++MNLSG +A Y+K+ P +
Sbjct: 26 VDRLVEDYNVPQGGVKFNAMYGKTMIGGEKVILMKPLSFMNLSGGPVREMANYFKIDPES 85
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ L G LR+R G GGHNG+K ++ G +F R+++G+G P D
Sbjct: 86 ELIVIYDDIDLEPGQLRIRKQGSAGGHNGIKDIIRQL-GTEKFLRIKVGVGAKPKGWDLA 144
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+L +F+ R+ +D A+ + + + +++S+G + +N
Sbjct: 145 DHVLGRFSTEDRKLVDEAIAKAAKAVDIIISQGTDAAMNEYN 186
>gi|312128224|ref|YP_003993098.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor hydrothermalis 108]
gi|311778243|gb|ADQ07729.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor hydrothermalis 108]
Length = 189
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 86/161 (53%), Gaps = 3/161 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ ++ + K G VLL KP TYMN SGES +YK+ +
Sbjct: 27 IDYLAQLFNTKVDKIKFKGLVGSFEYAGKKVLLLKPMTYMNASGESIIEAVNFYKIKPEK 86
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DD+ GV+++R G GGHNG+KS++ G EF R+RIGIG P + D
Sbjct: 87 LIVIYDDIAFDVGVVKMRKKGSDGGHNGVKSIIQRL-GTEEFPRIRIGIGVP--KYDMVK 143
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F +E+I A+++ +K+LL + + + N
Sbjct: 144 YVLSEFEDGEKEKIFRAIEKASNGIKILLESDMDRAMNYIN 184
>gi|37525972|ref|NP_929316.1| peptidyl-tRNA hydrolase [Photorhabdus luminescens subsp. laumondii
TTO1]
gi|46576711|sp|Q7N5A1.1|PTH_PHOLL RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|36785401|emb|CAE14348.1| peptidyl-tRNA hydrolase [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 196
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 79/134 (58%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V L P T+MNLSG+S LA++Y++ + +LV HD++ LP GV +++ G HGGHNGLK
Sbjct: 60 VRLLVPTTFMNLSGKSVVALASFYRIQPDEILVAHDELDLPPGVAKMKLGGSHGGHNGLK 119
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
+ N F N F RLRIGIG P + F+L K A ++ ID A+ E +L+
Sbjct: 120 DIQNKFGNNPNFYRLRIGIGHPGDKNKVVGFVLGKPPASEQQLIDDAIDEARRCTDILMK 179
Query: 152 KGLTESARHFNTIQ 165
+ + ++ ++ +
Sbjct: 180 QDMDKAINRLHSFK 193
>gi|314937291|ref|ZP_07844633.1| aminoacyl-tRNA hydrolase [Staphylococcus hominis subsp. hominis
C80]
gi|418619051|ref|ZP_13181893.1| aminoacyl-tRNA hydrolase [Staphylococcus hominis VCU122]
gi|313654587|gb|EFS18337.1| aminoacyl-tRNA hydrolase [Staphylococcus hominis subsp. hominis
C80]
gi|374825757|gb|EHR89680.1| aminoacyl-tRNA hydrolase [Staphylococcus hominis VCU122]
Length = 190
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 90/167 (53%), Gaps = 6/167 (3%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID + +++ K + + VL +P T MNLSGE+ GPL YY + +
Sbjct: 25 VIDYILDKNQFTLDKQKFKGAYTIERLNGDKVLFIEPMTMMNLSGEAVGPLMDYYNVEVE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DDM L G +RLR G GGHNG+KS++ + G +F R+RIG+GRP M
Sbjct: 85 DLIVLYDDMDLSQGNIRLRQKGSAGGHNGMKSIIKHL-GTDQFKRIRIGVGRPTNGMSVP 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKY 167
++LQKF+ ++ ++ + ++ + E++R + + +Y
Sbjct: 144 DYVLQKFSNEEMMTMEKVIEHAAQAVEAFI-----ETSRFDHVMNEY 185
>gi|226365172|ref|YP_002782955.1| peptidyl-tRNA hydrolase [Rhodococcus opacus B4]
gi|254783884|sp|C1AY15.1|PTH_RHOOB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226243662|dbj|BAH54010.1| peptidyl-tRNA hydrolase [Rhodococcus opacus B4]
Length = 190
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 90/135 (66%), Gaps = 1/135 (0%)
Query: 20 ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 79
A QG + P +LAKP+++MNLSG + LA ++ + ++V HD++ L G +RL+
Sbjct: 49 AEIVQGRLEGRPTILAKPRSFMNLSGSAVAGLARFFSVDPGNIVVIHDELDLDFGTIRLK 108
Query: 80 HNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTAL 139
GG GGHNGL+S+ + G +++ R R+GIGRPPG+MDP +++L+ F+++ R+ +D
Sbjct: 109 QGGGEGGHNGLRSISQSL-GTKDYLRTRVGIGRPPGRMDPASYVLKPFSSVERKELDLVC 167
Query: 140 QEGVEVLKLLLSKGL 154
+E + ++L+L GL
Sbjct: 168 EESADAVELVLRLGL 182
>gi|347761435|ref|YP_004868996.1| peptidyl-tRNA hydrolase [Gluconacetobacter xylinus NBRC 3288]
gi|347580405|dbj|BAK84626.1| peptidyl-tRNA hydrolase [Gluconacetobacter xylinus NBRC 3288]
Length = 190
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 75/139 (53%), Gaps = 1/139 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D A G S + +G VG VLL KP TYMNLSGES AA+YKLP
Sbjct: 26 VDRIAGRHGFSPWRRRFRGEVAEGMVGRHKVLLLKPMTYMNLSGESVQQAAAFYKLPAES 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+ FHD++ L G +R++ GG GHNGL+S M+ G +E+ R+R+GIG P +
Sbjct: 86 ITAFHDELDLAPGRIRVKRGGGAAGHNGLRS-MDRMLGTKEYWRVRLGIGHPGSRERVTG 144
Query: 122 FLLQKFNAIARERIDTALQ 140
+L F+ E +D L
Sbjct: 145 HVLGDFSRADHEWLDPMLD 163
>gi|443311858|ref|ZP_21041481.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 7509]
gi|442778094|gb|ELR88364.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 7509]
Length = 211
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 95/168 (56%), Gaps = 7/168 (4%)
Query: 2 IDAFAESQGISMN-TVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
ID A + I+++ + FG+G V L KP TYMN SG+S + ++KLP
Sbjct: 37 IDELARAWQINLSENRKYQGEFGEGQKQLNKVRLLKPLTYMNCSGQSIRAVIDWFKLPPT 96
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQM--- 117
VL+ +DDM LP G LRLR +G GGHNG+KS + + G + F RLRIGIG+P
Sbjct: 97 SVLIIYDDMDLPLGKLRLRLSGSAGGHNGMKSAIAHL-GLQNFPRLRIGIGKPQNAASGD 155
Query: 118 DPK--AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
D K +++L +F+A + L V+ ++L L +G+ ++ +N+
Sbjct: 156 DAKTISYVLGQFDAKESPIVTEVLNVVVDCVELCLKQGVEQAMNRYNS 203
>gi|119390904|sp|Q4JU39.2|PTH1_CORJK RecName: Full=Peptidyl-tRNA hydrolase 1; Short=PTH 1
Length = 193
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 69/96 (71%), Gaps = 1/96 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+LA+P+T+MN+SG LAA++K+P ++V +DD+ G ++LR +GG GHNGLK
Sbjct: 72 VVLAQPRTFMNVSGGPVQQLAAFFKIPAENIIVAYDDLEGDPGAVKLRQSGGDKGHNGLK 131
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKF 127
S+ + G +++ RL GIGRPPG+MDP A++L+ F
Sbjct: 132 SITKSL-GTKDYWRLSCGIGRPPGRMDPAAYVLKPF 166
>gi|222528652|ref|YP_002572534.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor bescii DSM 6725]
gi|254783849|sp|B9MPK0.1|PTH_ANATD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|222455499|gb|ACM59761.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor bescii DSM 6725]
Length = 189
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 86/161 (53%), Gaps = 3/161 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ ++ + K G VLL KP TYMN SGES +YK+ +
Sbjct: 27 IDYLAQFFNTKVDKIKFKGLVGSFEYAGKKVLLLKPMTYMNASGESIIEAVNFYKIKPEK 86
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DD+ GV+++R G GGHNG+KS++ G EF R+RIGIG P + D
Sbjct: 87 LIVIYDDIAFDVGVVKMRKKGSDGGHNGIKSIIQCL-GTEEFPRIRIGIGVP--KYDMVK 143
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F +E+I A+++ +K+LL + + + N
Sbjct: 144 YVLSEFEDGEKEKIFRAIEKASNGIKILLESDIDRAMNYIN 184
>gi|363900456|ref|ZP_09326961.1| peptidyl-tRNA hydrolase [Oribacterium sp. ACB1]
gi|395208890|ref|ZP_10398055.1| aminoacyl-tRNA hydrolase [Oribacterium sp. ACB8]
gi|361956330|gb|EHL09648.1| peptidyl-tRNA hydrolase [Oribacterium sp. ACB1]
gi|394705491|gb|EJF13017.1| aminoacyl-tRNA hydrolase [Oribacterium sp. ACB8]
Length = 189
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 89/162 (54%), Gaps = 2/162 (1%)
Query: 2 IDAF-AESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
IDA E G + + F + +G V++ KP TYMNLSG+S P+A +YK+P
Sbjct: 26 IDALLDELGGKGLESTKFHGAFTKLRIGAEEVIILKPLTYMNLSGDSIAPMANFYKIPAE 85
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+VLV D++ L G +R+R G GGHNGLKS++ G +F R+R+G+G D
Sbjct: 86 QVLVISDEISLSPGSIRIRKKGSAGGHNGLKSIIARL-GTEDFPRIRLGVGDKDENRDLA 144
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
A +L F+ +R++ A E + +++G+ ++ +N
Sbjct: 145 AHVLGHFSKEEEKRMEEAYAEVAKACICTVTEGIEKAMNLYN 186
>gi|239988327|ref|ZP_04708991.1| peptidyl-tRNA hydrolase [Streptomyces roseosporus NRRL 11379]
Length = 197
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 79/132 (59%), Gaps = 2/132 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+L KP +YMNLSG L +YK+P + V+ HD++ + G LRL+ GG GHNGLK
Sbjct: 68 VVLVKPMSYMNLSGGPVTALRDFYKVPTDHVVAVHDELDVDYGALRLKLGGGDNGHNGLK 127
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ ++ R+R GIGRPPG+M F+L+ F++ R+ + + + ++ LL+
Sbjct: 128 SMTKAM--GPDYHRVRFGIGRPPGRMQVADFVLKDFSSTERKELAFLVDRSADAVECLLA 185
Query: 152 KGLTESARHFNT 163
+GL + +N+
Sbjct: 186 EGLERAQSAYNS 197
>gi|410696651|gb|AFV75719.1| peptidyl-tRNA hydrolase [Thermus oshimai JL-2]
Length = 187
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 78/147 (53%), Gaps = 1/147 (0%)
Query: 19 KATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRL 78
+A +G VG+ KP TY NL+G+ PLA +YK+P R+LV HD+M LP G LRL
Sbjct: 38 EALLAEGAVGEEKGFFLKPLTYYNLTGQVVAPLARFYKIPPERILVVHDEMDLPLGRLRL 97
Query: 79 RHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTA 138
+ G G+ G+ S+ G F RLRIGIG+PP + A++L F R ++
Sbjct: 98 KAGGRPAGNRGVASIGEAL-GTWAFHRLRIGIGKPPRPEEGAAYVLSPFREEERPLVERV 156
Query: 139 LQEGVEVLKLLLSKGLTESARHFNTIQ 165
L+ E + +GL A FN +
Sbjct: 157 LEVAKEAVLCWAERGLLPCADRFNGLD 183
>gi|397736067|ref|ZP_10502751.1| peptidyl-tRNA hydrolase [Rhodococcus sp. JVH1]
gi|396927910|gb|EJI95135.1| peptidyl-tRNA hydrolase [Rhodococcus sp. JVH1]
Length = 190
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 94/142 (66%), Gaps = 3/142 (2%)
Query: 15 TVHCKA--TFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLP 72
+VH K+ QG + P +LAKP+++MNLSG + LA ++ + ++V HD++ L
Sbjct: 42 SVHKKSGAEIVQGRLEGRPTILAKPRSFMNLSGSAVAGLARFFSVDPGNIVVIHDELDLD 101
Query: 73 CGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIAR 132
G +RL+ GG GGHNGL+S+ + G +++ R R+GIGRPPG+MDP +++L+ F+++ R
Sbjct: 102 FGTIRLKQGGGEGGHNGLRSISSAL-GTKDYLRTRVGIGRPPGRMDPASYVLKPFSSVER 160
Query: 133 ERIDTALQEGVEVLKLLLSKGL 154
+ +D +E + ++L+L GL
Sbjct: 161 KELDLVCEESADAVELVLRVGL 182
>gi|399527966|ref|ZP_10767638.1| aminoacyl-tRNA hydrolase [Actinomyces sp. ICM39]
gi|398361495|gb|EJN45252.1| aminoacyl-tRNA hydrolase [Actinomyces sp. ICM39]
Length = 172
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 84/132 (63%), Gaps = 1/132 (0%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+LA+ +YMN SG LA ++K+ +R+LV HDDM LP LRL+ GG GGHNGLK
Sbjct: 40 VILARSDSYMNTSGGPISALATFHKIEPSRILVIHDDMDLPAHTLRLKVGGGEGGHNGLK 99
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ + G R++ARLRIG+GRPPG+MDP ++L + R D ++ +V++ +++
Sbjct: 100 SLSQHL-GTRDYARLRIGVGRPPGRMDPADYVLATLPSKERPDWDVTFEQAADVVEDIVT 158
Query: 152 KGLTESARHFNT 163
KG + +T
Sbjct: 159 KGFAPTQMALHT 170
>gi|255325404|ref|ZP_05366508.1| aminoacyl-tRNA hydrolase [Corynebacterium tuberculostearicum SK141]
gi|255297490|gb|EET76803.1| aminoacyl-tRNA hydrolase [Corynebacterium tuberculostearicum SK141]
Length = 197
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 77/132 (58%), Gaps = 3/132 (2%)
Query: 15 TVHCKAT--FGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLP 72
+VH K +G G ++ AKP+++MNLSG LA Y+ L ++V HD++ L
Sbjct: 61 SVHKKTNTEVAEGMAGGRKIICAKPRSFMNLSGGPIKALAQYFHLSAADIIVVHDELELD 120
Query: 73 CGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIAR 132
G ++LR GG GHNGL+S + G +++ RL +GIGRPPG+MDP +F+L+ + +
Sbjct: 121 FGTIKLRQGGGDHGHNGLRSTTKSL-GTKDYQRLSVGIGRPPGRMDPASFVLKPWAKQEK 179
Query: 133 ERIDTALQEGVE 144
I + VE
Sbjct: 180 AEIPILCADAVE 191
>gi|228476232|ref|ZP_04060935.1| aminoacyl-tRNA hydrolase [Staphylococcus hominis SK119]
gi|228269717|gb|EEK11216.1| aminoacyl-tRNA hydrolase [Staphylococcus hominis SK119]
Length = 190
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 90/167 (53%), Gaps = 6/167 (3%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID + +++ K + + VL +P T MNLSGE+ GPL YY + +
Sbjct: 25 VIDYILDKNQFTLDKQKFKGAYTIERLNGDKVLFIEPMTMMNLSGEAVGPLMDYYNVEVE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DDM L G +RLR G GGHNG+KS++ + G +F R+RIG+GRP M
Sbjct: 85 DLIVLYDDMDLSQGHIRLRQKGSAGGHNGMKSIIKHL-GTDQFKRIRIGVGRPTNGMSVP 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKY 167
++LQKF+ ++ ++ + ++ + E++R + + +Y
Sbjct: 144 DYVLQKFSNEEMMTMEKVIEHAAQAVEAFI-----ETSRFDHVMNEY 185
>gi|408531356|emb|CCK29530.1| Peptidyl-tRNA hydrolase [Streptomyces davawensis JCM 4913]
Length = 198
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 79/132 (59%), Gaps = 2/132 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+LAKP ++MNLSG L +YK+P+ ++ HD++ + G LRL+ GG GHNGLK
Sbjct: 69 VILAKPMSFMNLSGGPVNALKDFYKVPVANIVAIHDELDIDHGTLRLKLGGGDNGHNGLK 128
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ ++ R+R GIGRPPG+M F+L+ F+ R+ +D + + ++ L+
Sbjct: 129 SMTKAM--GSDYHRVRFGIGRPPGRMQVADFVLKDFSGAERKELDYFVDRAADAVECLVI 186
Query: 152 KGLTESARHFNT 163
+GL + +N+
Sbjct: 187 EGLERAQGTYNS 198
>gi|343925285|ref|ZP_08764812.1| peptidyl-tRNA hydrolase [Gordonia alkanivorans NBRC 16433]
gi|343764882|dbj|GAA11738.1| peptidyl-tRNA hydrolase [Gordonia alkanivorans NBRC 16433]
Length = 189
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 102/167 (61%), Gaps = 7/167 (4%)
Query: 3 DAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
D +S G VH K A + +G VL+AKP+ YMN SG GPLA +Y +
Sbjct: 28 DGLVDSAG-ERWKVHKKSGAEVAEVRLGGQSVLVAKPRVYMNESGRQIGPLAKFYSVAPA 86
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V HD++ + G++RL+ GG GGHNGL+S+ G R++ R+R+GIGRPPG+ DP
Sbjct: 87 DLIVVHDELDIDFGLVRLKRGGGEGGHNGLRSISQAI-GTRDYLRVRMGIGRPPGRQDPA 145
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKY 167
F+L+ F + R ++ ++ G + ++LL+S+ L ESA+ NT+ +
Sbjct: 146 DFVLKPFPSADRAEVELMIRNGCDAIELLVSQDL-ESAQ--NTVHAW 189
>gi|293189924|ref|ZP_06608604.1| aminoacyl-tRNA hydrolase [Actinomyces odontolyticus F0309]
gi|292821143|gb|EFF80090.1| aminoacyl-tRNA hydrolase [Actinomyces odontolyticus F0309]
Length = 200
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 84/132 (63%), Gaps = 1/132 (0%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+LA+ +YMN SG LA ++K+ +R+LV HDDM LP LRL+ GG GGHNGLK
Sbjct: 68 VILARSDSYMNTSGGPISALATFHKIDPSRILVIHDDMDLPAHTLRLKVGGGEGGHNGLK 127
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ + G R++ARLRIG+GRPPG+MDP ++L + R D ++ +V++ +++
Sbjct: 128 SLSQHL-GTRDYARLRIGVGRPPGRMDPADYVLATLPSKERPEWDVTFEQAADVVEDIVT 186
Query: 152 KGLTESARHFNT 163
KG + +T
Sbjct: 187 KGFAPTQMALHT 198
>gi|290475208|ref|YP_003468094.1| peptidyl-tRNA hydrolase [Xenorhabdus bovienii SS-2004]
gi|289174527|emb|CBJ81321.1| peptidyl-tRNA hydrolase [Xenorhabdus bovienii SS-2004]
Length = 196
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 77/126 (61%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V L P T+MNLSG+S LA +Y++ + +LV HD++ LP GV +++ G +GGHNGLK
Sbjct: 60 VRLLVPTTFMNLSGKSVLALAGFYRIQPDEILVAHDELDLPPGVAKMKLGGSNGGHNGLK 119
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
+ N F N F RLRIGIG P + F+L K A ++ ID A+ E + +L+
Sbjct: 120 DIQNKFSNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPASEQKLIDEAIDEALSCTDILMK 179
Query: 152 KGLTES 157
+G+ ++
Sbjct: 180 EGMNKA 185
>gi|73663563|ref|YP_302344.1| peptidyl-tRNA hydrolase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|418577117|ref|ZP_13141244.1| peptidyl-tRNA hydrolase [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|119391016|sp|Q49V11.1|PTH_STAS1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|72496078|dbj|BAE19399.1| peptidyl-tRNA hydrolase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|379324397|gb|EHY91548.1| peptidyl-tRNA hydrolase [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
Length = 190
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 86/167 (51%), Gaps = 6/167 (3%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID E S++ K + + V+ +P T MNLSGE+ PL YY + +
Sbjct: 25 VIDFMLEQNRFSLDKQKFKGAYTIERLAGEKVMFIEPMTMMNLSGEAVAPLMKYYDIDIE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ LP G +RLR G GGHNG+KS++ G +F R+RIG+ RP M
Sbjct: 85 DLIVLYDDLDLPQGEIRLRQKGSAGGHNGMKSIIQML-GTDQFKRIRIGVDRPSNGMAIV 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKY 167
++LQKF+ E ++ ++ ++ + ES R + +Y
Sbjct: 144 DYVLQKFSNQEMETMNKVIEHSARAIEAYI-----ESNRFDRVMNEY 185
>gi|424851136|ref|ZP_18275533.1| peptidyl-tRNA hydrolase [Rhodococcus opacus PD630]
gi|356665801|gb|EHI45872.1| peptidyl-tRNA hydrolase [Rhodococcus opacus PD630]
Length = 190
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 90/135 (66%), Gaps = 1/135 (0%)
Query: 20 ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 79
A QG + P +LAKP+++MNLSG + LA ++ + ++V HD++ L G +RL+
Sbjct: 49 AEIVQGRLEGRPTILAKPRSFMNLSGSAVAGLARFFSVDPGNIVVIHDELDLDFGTIRLK 108
Query: 80 HNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTAL 139
GG GGHNGL+S+ + G +++ R R+GIGRPPG+MDP +++L+ F+++ R+ +D
Sbjct: 109 QGGGEGGHNGLRSISSAL-GTKDYLRTRVGIGRPPGRMDPASYVLKPFSSVERKELDLVC 167
Query: 140 QEGVEVLKLLLSKGL 154
+E + ++L+L GL
Sbjct: 168 EESADAVELVLRVGL 182
>gi|429729369|ref|ZP_19264028.1| aminoacyl-tRNA hydrolase [Corynebacterium durum F0235]
gi|429149393|gb|EKX92371.1| aminoacyl-tRNA hydrolase [Corynebacterium durum F0235]
Length = 199
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 79/127 (62%), Gaps = 1/127 (0%)
Query: 28 GDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGH 87
GD ++LAKP+++MNLSG L +YK+P ++V HD++ L +RL+ GG GH
Sbjct: 64 GDKKIILAKPRSFMNLSGGPIAALIQFYKVPKENIIVVHDELDLDFDTVRLKLGGGDNGH 123
Query: 88 NGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 147
NGL+S + G +++ R+R+GIGRPPG+ P ++L+ F+ E + + E +
Sbjct: 124 NGLRSTTKSL-GTKDYYRIRVGIGRPPGRQTPANYVLRPFSKEEFEGLPLICEHAAEGAE 182
Query: 148 LLLSKGL 154
L++++GL
Sbjct: 183 LIINQGL 189
>gi|297616312|ref|YP_003701471.1| peptidyl-tRNA hydrolase [Syntrophothermus lipocalidus DSM 12680]
gi|297144149|gb|ADI00906.1| peptidyl-tRNA hydrolase [Syntrophothermus lipocalidus DSM 12680]
Length = 191
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 79/131 (60%), Gaps = 1/131 (0%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V++AKP TYMN SG++ PL + KL L VLV DD+ L G +R+R GG GGH GL
Sbjct: 56 VVVAKPLTYMNRSGQAVKPLVSALKLNLEDVLVICDDLDLETGRIRIRPRGGSGGHRGLA 115
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
SV+++ G EFARLR+GIGRPP D ++L F A E + A+ + ++ +
Sbjct: 116 SVISSL-GTEEFARLRVGIGRPPTGEDVIDYVLDGFTASETETMARAIARAADAVETWIG 174
Query: 152 KGLTESARHFN 162
+G+ ++ +N
Sbjct: 175 QGIEKAMNTYN 185
>gi|416381169|ref|ZP_11684175.1| Peptidyl-tRNA hydrolase [Crocosphaera watsonii WH 0003]
gi|357265569|gb|EHJ14318.1| Peptidyl-tRNA hydrolase [Crocosphaera watsonii WH 0003]
Length = 204
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 92/165 (55%), Gaps = 3/165 (1%)
Query: 1 MIDAFAESQGISM-NTVHCKATFGQGFV-GDAPVLLAKPQTYMNLSGESTGPLAAYYKLP 58
++D AE+ +S T + +G + L KP TYMN SG+S + +YKL
Sbjct: 36 IVDILAETWQLSWKETRRFQGMIAEGNSRNQQKIYLLKPSTYMNRSGQSVRAVTDWYKLE 95
Query: 59 LNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMD 118
VLV +DDM LP G LR+R +G GGHNG+KS++++ G + F RLRIGIG+ +
Sbjct: 96 SENVLVIYDDMDLPIGRLRMRLSGSAGGHNGMKSIISHL-GGQNFPRLRIGIGKSNQVDN 154
Query: 119 PKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
+ +L +F+ R+ ID V+ ++ L +G+ ++ FN+
Sbjct: 155 TISHVLGRFSPEERKIIDKTYPLVVDAIETTLKEGVEKAMSQFNS 199
>gi|373859319|ref|ZP_09602049.1| peptidyl-tRNA hydrolase [Bacillus sp. 1NLA3E]
gi|372450988|gb|EHP24469.1| peptidyl-tRNA hydrolase [Bacillus sp. 1NLA3E]
Length = 186
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 86/163 (52%), Gaps = 1/163 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+I+ +E I ++ K FG G V +LL KP T+MNLSGES + YY++ +
Sbjct: 25 VIEKLSEQLNIRLDQAKFKGIFGMGNVEGEKILLLKPLTFMNLSGESIRVVMDYYQVQIE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ LP G +RLR G GGHNG+KS + + G + F R+R+GI RP +
Sbjct: 85 DLVVIYDDLDLPVGRIRLRQQGSAGGHNGIKSTIAHL-GTQNFNRIRVGIDRPRTGTNVA 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F R ++ + + + L + + FN
Sbjct: 144 DYVLGRFTKDERVLMEDVIVKCSGACEQWLKRPFLQVMNEFNV 186
>gi|268317961|ref|YP_003291680.1| peptidyl-tRNA hydrolase [Rhodothermus marinus DSM 4252]
gi|345304241|ref|YP_004826143.1| peptidyl-tRNA hydrolase [Rhodothermus marinus SG0.5JP17-172]
gi|262335495|gb|ACY49292.1| peptidyl-tRNA hydrolase [Rhodothermus marinus DSM 4252]
gi|345113474|gb|AEN74306.1| peptidyl-tRNA hydrolase [Rhodothermus marinus SG0.5JP17-172]
Length = 194
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 84/165 (50%), Gaps = 1/165 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D AE GI+ + + G G + P L KP TYMN SG + + YY++PL
Sbjct: 28 VVDRLAERYGIAWRSEKGPSLLGWGQLEGCPAGLMKPLTYMNRSGAAVAEVVRYYRIPLE 87
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
R+LV +DD+ LP G +RLR G GGHNG++ ++ G F RLRIGIG +
Sbjct: 88 RLLVVYDDIHLPPGRIRLRPGGSAGGHNGVEDIIRAL-GTTAFPRLRIGIGSNFERGRQA 146
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQ 165
++L F ID AL+ + +G+ + +N ++
Sbjct: 147 DYVLSPFTREEWPLIDEALERACQAAVTFACEGIEAAMNRYNRVE 191
>gi|210634808|ref|ZP_03298314.1| hypothetical protein COLSTE_02241 [Collinsella stercoris DSM 13279]
gi|210158612|gb|EEA89583.1| aminoacyl-tRNA hydrolase [Collinsella stercoris DSM 13279]
Length = 209
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 80/135 (59%), Gaps = 1/135 (0%)
Query: 28 GDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGH 87
G V+L KPQ+YMN SG L A YK+ +LV HD++ +P G +R++ GGH GH
Sbjct: 67 GKREVVLVKPQSYMNTSGGPISKLCAQYKVKPEELLVIHDELDIPAGDVRVKVGGGHAGH 126
Query: 88 NGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 147
NGL+S+++ G+R+F+R+R GIG PPG+M F+L++ + E + E
Sbjct: 127 NGLRSIIDKL-GSRDFSRIRAGIGDPPGRMPVADFVLKQLRSREAEDFAVMTSQAAEAAA 185
Query: 148 LLLSKGLTESARHFN 162
L +++G+ + H N
Sbjct: 186 LAITRGVVFARDHVN 200
>gi|300723043|ref|YP_003712341.1| peptidyl-tRNA hydrolase [Xenorhabdus nematophila ATCC 19061]
gi|297629558|emb|CBJ90161.1| peptidyl-tRNA hydrolase [Xenorhabdus nematophila ATCC 19061]
Length = 196
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 76/126 (60%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
+ L P T+MNLSG+S LA +Y++ + +LV HD++ LP GV +++ G +GGHNGLK
Sbjct: 60 IRLLVPTTFMNLSGKSVLTLAGFYRIEPDEILVAHDELDLPPGVAKMKLGGSNGGHNGLK 119
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
+ N F N F RLRIGIG P + F+L K A ++ ID A+ E + +L+
Sbjct: 120 DIQNKFSNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPASEQQLIDDAIDEALRCTDILIK 179
Query: 152 KGLTES 157
G+ ++
Sbjct: 180 DGMNKA 185
>gi|406027394|ref|YP_006726226.1| peptidyl-tRNA hydrolase, PTH1 family [Lactobacillus buchneri CD034]
gi|405125883|gb|AFS00644.1| peptidyl-tRNA hydrolase, PTH1 family [Lactobacillus buchneri CD034]
Length = 186
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 78/128 (60%), Gaps = 1/128 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+++ FA+S IS+ T A +G GFV + V++ +P T+MN SG + PL Y+ + +
Sbjct: 25 VVEQFAKSHDISIKTRKMNAKYGSGFVNNTKVMVVEPTTFMNDSGLAVRPLMDYFDVSIE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+++ HDDM LP G +R++ G GGHNG+KS++ + G + F R+R+GI P
Sbjct: 85 DLIIVHDDMDLPVGKIRIKDKGSAGGHNGIKSIIASV-GTQNFDRIRVGIDHPDHGNTVV 143
Query: 121 AFLLQKFN 128
++L +F+
Sbjct: 144 NYVLGRFS 151
>gi|312792830|ref|YP_004025753.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312179970|gb|ADQ40140.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 189
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 86/161 (53%), Gaps = 3/161 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ ++ + K G VLL KP TYMN SG+S +YK+ +
Sbjct: 27 IDYLAQFFNTKVDKIKFKGLVGSFEYSGKKVLLLKPMTYMNASGDSIIEAVNFYKIKPEK 86
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DD+ GV+++R G GGHNG+KS++ G EF R+RIGIG P + D
Sbjct: 87 LIVIYDDIAFDVGVVKMRKKGSDGGHNGVKSIIQRL-GTEEFPRIRIGIGVP--KYDMVK 143
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F +E+I A+++ +K+LL + + + N
Sbjct: 144 YVLSEFEDGEKEKIFKAIEKAANGIKILLESDIDRAMNYIN 184
>gi|312134558|ref|YP_004001896.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor owensensis OL]
gi|311774609|gb|ADQ04096.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor owensensis OL]
Length = 189
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 86/161 (53%), Gaps = 3/161 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ ++ + K G VLL KP TYMN SGES +YK+ +
Sbjct: 27 IDYLAQFFNTKVDKIKFKGLVGSFEYAGKKVLLLKPMTYMNASGESIKEAVNFYKIKPEK 86
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DD+ G++++R G GGHNG+KS++ G EF R+RIGIG P + D
Sbjct: 87 LIVIYDDIAFDVGIVKMRKKGSDGGHNGVKSIIQCL-GTEEFPRIRIGIGIP--KYDMVK 143
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F +E+I A+++ +K+LL + + + N
Sbjct: 144 YVLSEFEDGEKEKIFRAIEKASNGIKILLESDIDRAMNYIN 184
>gi|297568583|ref|YP_003689927.1| peptidyl-tRNA hydrolase [Desulfurivibrio alkaliphilus AHT2]
gi|296924498|gb|ADH85308.1| peptidyl-tRNA hydrolase [Desulfurivibrio alkaliphilus AHT2]
Length = 197
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 88/148 (59%), Gaps = 5/148 (3%)
Query: 3 DAFAESQGISM-NTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
D A+ GIS+ N A G+G + PV+L KP TYMN SG + G +A +++L
Sbjct: 27 DYLADRHGISLKNEKKWDAEVGRGTLWGQPVMLVKPLTYMNRSGLAVGKIARFFQLEPTS 86
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
V+VF D++ LP G RL G GGHNG+KS+M++ +R+F R RIG+GRPP
Sbjct: 87 VVVFQDELDLPLGACRLVQGRGAGGHNGIKSLMDHL-ASRDFVRFRIGVGRPPAARAAAG 145
Query: 122 FLLQKFNAIARERIDTA---LQEGVEVL 146
F+L +F+ + +D L+EGVE+L
Sbjct: 146 FVLARFSPAELQVVDKLLPFLEEGVEML 173
>gi|322433961|ref|YP_004216173.1| peptidyl-tRNA hydrolase [Granulicella tundricola MP5ACTX9]
gi|321161688|gb|ADW67393.1| peptidyl-tRNA hydrolase [Granulicella tundricola MP5ACTX9]
Length = 206
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 94/168 (55%), Gaps = 8/168 (4%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLP-LN 60
ID AE G ++N KA G+ + VLLAKP+T+MNLSG S L L +
Sbjct: 26 IDRLAEVFGTAVNNRRGKALTGKAVISGQEVLLAKPETFMNLSGLSVAALLQELGLSHQS 85
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQM--D 118
++V +D++ +P G LR+R G GGHNG+KS+ + G+ E+ R+RIG+G+ P + +
Sbjct: 86 DLIVLYDELAIPLGQLRIRERGSAGGHNGVKSI-SGVLGSEEWTRIRIGVGKQPTETGRE 144
Query: 119 PKA----FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
KA +LL + + +D L E V+ ++ +L +G+ + FN
Sbjct: 145 IKAGGVDYLLSPMRRMMLQELDLVLDETVKAVETILKEGVKAAMNKFN 192
>gi|344345141|ref|ZP_08775997.1| Peptidyl-tRNA hydrolase [Marichromatium purpuratum 984]
gi|343803232|gb|EGV21142.1| Peptidyl-tRNA hydrolase [Marichromatium purpuratum 984]
Length = 194
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 81/151 (53%), Gaps = 2/151 (1%)
Query: 1 MIDAFAESQGISMN-TVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPL 59
+D+ A S G+ + +G + L KP TYMN SG S +A Y+ +PL
Sbjct: 30 FVDSLARSAGVDFRPESRFHGELCRCVIGGRDLRLLKPSTYMNHSGRSVAAVARYFDIPL 89
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
+L+ HD++ LP G +RL+ GGH GHNGL+ ++ G R+F RLRIGI P +
Sbjct: 90 ESILIAHDELDLPVGAVRLKQGGGHAGHNGLRDSISAL-GGRDFWRLRIGIDHPGDRSLV 148
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLL 150
++L + + R+ ID AL E VL LL
Sbjct: 149 TGYVLGRPSGSDRQAIDDALFETERVLDDLL 179
>gi|189095922|pdb|2JRC|A Chain A, Solution Structure Of Peptidyl-Trna Hydrolase From
Mycobacterium Tuberculosis H37rv
Length = 204
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 86/137 (62%), Gaps = 4/137 (2%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
++LAKP+ YMN SG GPLA +Y + ++V HDD+ L G +RL+ GG GGHNGL+
Sbjct: 60 LVLAKPRCYMNESGRQIGPLAKFYSVAPANIIVIHDDLDLEFGRIRLKIGGGEGGHNGLR 119
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
SV+ G ++F R+RIGIGRPPG+ DP AF+L+ F R + T ++ + +LL+
Sbjct: 120 SVVAAL-GTKDFQRVRIGIGRPPGRKDPAAFVLENFTPAERAEVPTICEQAADATELLIE 178
Query: 152 KGLTESARHFNTIQKYK 168
+G+ + N + +K
Sbjct: 179 QGMEPAQ---NRVHAWK 192
>gi|298490956|ref|YP_003721133.1| peptidyl-tRNA hydrolase ['Nostoc azollae' 0708]
gi|298232874|gb|ADI64010.1| peptidyl-tRNA hydrolase ['Nostoc azollae' 0708]
Length = 209
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 95/169 (56%), Gaps = 8/169 (4%)
Query: 2 IDAFAESQGISM-NTVHCKATFGQGFV-GDAPVLLAKPQTYMNLSGESTGPLAAYYKLPL 59
IDA + I + + FG+G G + L KP TYMN SG S + ++YKLP
Sbjct: 38 IDALSRPWQIPLAENRKFQGQFGEGTAPGGGKIGLLKPLTYMNRSGHSVQAVRSWYKLPP 97
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPG---- 115
VLV +DDM LP G RLR +G GGHNG+KS++++ ++ F RL+IGIG+P G
Sbjct: 98 ESVLVIYDDMDLPLGKTRLRLSGSAGGHNGMKSIISHLS-SQNFPRLKIGIGKPKGAANE 156
Query: 116 -QMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
D + +L +F+A + + L+ +E ++L L +G+ ++ N+
Sbjct: 157 DNTDTVSHVLGRFSATETKLMTLVLEFVIECVELTLKQGVEKAMNCCNS 205
>gi|431792122|ref|YP_007219027.1| peptidyl-tRNA hydrolase [Desulfitobacterium dichloroeliminans LMG
P-21439]
gi|430782348|gb|AGA67631.1| peptidyl-tRNA hydrolase [Desulfitobacterium dichloroeliminans LMG
P-21439]
Length = 185
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 83/154 (53%), Gaps = 13/154 (8%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D AE + + + + +G + L KPQT+MNLSG S + +YK+
Sbjct: 25 LLDCLAEELNLDFRS-KFQGLVSETQIGGEKIYLLKPQTFMNLSGRSIREVVQFYKIAPQ 83
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV +DDM L G LRLR +G GGHNG+KS + G+ +F RL++GIGRPP D
Sbjct: 84 DILVIYDDMDLAVGRLRLRSSGSAGGHNGIKSTIAEL-GSEDFWRLKVGIGRPPTGWDSA 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 154
++L F +E + VL+ +L KG+
Sbjct: 143 RYVLASFA-----------KEEIPVLEEVLDKGM 165
>gi|54026867|ref|YP_121109.1| peptidyl-tRNA hydrolase [Nocardia farcinica IFM 10152]
gi|68052906|sp|Q5YPZ6.1|PTH_NOCFA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|54018375|dbj|BAD59745.1| putative peptidyl-tRNA hydrolase [Nocardia farcinica IFM 10152]
Length = 193
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 92/154 (59%), Gaps = 4/154 (2%)
Query: 3 DAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
D AE G VH K A Q + VL+AKP++YMNLSG LA ++ +P
Sbjct: 34 DVLAERVGDRF-AVHKKSGADLLQARLDGRQVLIAKPRSYMNLSGRPVAALARFFSVPPT 92
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V+V HD++ LP G +RL+ GG GGHNGL+S+ + +++ R RIGIGRPPG+ DP
Sbjct: 93 EVIVVHDELDLPFGAVRLKRGGGEGGHNGLRSISSAL-TTKDYLRTRIGIGRPPGRQDPA 151
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 154
F+L+ F A R+ + +++ + ++LLL GL
Sbjct: 152 DFVLKPFAAAERKEVPVIVEQAADAVELLLRVGL 185
>gi|169830289|ref|YP_001716271.1| aminoacyl-tRNA hydrolase [Candidatus Desulforudis audaxviator
MP104C]
gi|238688211|sp|B1I197.1|PTH_DESAP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|169637133|gb|ACA58639.1| Aminoacyl-tRNA hydrolase [Candidatus Desulforudis audaxviator
MP104C]
Length = 195
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 89/165 (53%), Gaps = 4/165 (2%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A + G ++N C + G+G + V+LAKPQTYMNLSG + L +Y+L L
Sbjct: 25 VVDRLAGAAGTTVNRRRCFSLVGEGRLNGVRVVLAKPQTYMNLSGLAVSALCRHYRLELA 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV DD+ L G +RLR GG GGH GL S++ G+ +F R+RIGIG+ D
Sbjct: 85 DLLVICDDLDLEFGRIRLRPKGGSGGHRGLASIIAAL-GSSDFPRVRIGIGKAE---DAS 140
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQ 165
A +L +F + ++ L +GL E+ FN+ +
Sbjct: 141 AHVLGEFAPEDQSGLEEILSTAALAAACACREGLDEAMSRFNSWR 185
>gi|331701923|ref|YP_004398882.1| peptidyl-tRNA hydrolase [Lactobacillus buchneri NRRL B-30929]
gi|329129266|gb|AEB73819.1| Peptidyl-tRNA hydrolase [Lactobacillus buchneri NRRL B-30929]
Length = 186
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 72/113 (63%), Gaps = 1/113 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+++ FA+S IS+ T A +G GFV + V++ +P T+MN SG + PL Y+ + +
Sbjct: 25 VVEQFAKSHDISIKTRKMNAKYGSGFVNNTKVMVVEPTTFMNDSGLAVRPLMDYFDVSIE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRP 113
+++ HDDM LP G +R++ G GGHNG+KS++ + G + F R+R+GI P
Sbjct: 85 DLIIVHDDMDLPVGKIRIKDKGSAGGHNGIKSIIASV-GTQNFDRIRVGIDHP 136
>gi|293395768|ref|ZP_06640050.1| aminoacyl-tRNA hydrolase [Serratia odorifera DSM 4582]
gi|291421705|gb|EFE94952.1| aminoacyl-tRNA hydrolase [Serratia odorifera DSM 4582]
Length = 196
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 77/126 (61%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V L P T+MNLSG++ +A +Y++ + +LV HD++ LP GV +L+ G +GGHNGLK
Sbjct: 60 VRLLVPTTFMNLSGKAVAAMATFYRIQADEILVAHDELDLPPGVAKLKLGGSNGGHNGLK 119
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
+ + N F RLRIGIG P + F+L K A + ID A+ E + +LLL
Sbjct: 120 DIQSKMANNPNFYRLRIGIGHPGDRNKVVGFVLGKPPASEQTLIDDAIDESLRCTELLLK 179
Query: 152 KGLTES 157
+G+T++
Sbjct: 180 EGMTKA 185
>gi|187251695|ref|YP_001876177.1| aminoacyl-tRNA hydrolase [Elusimicrobium minutum Pei191]
gi|226723254|sp|B2KE94.1|PTH_ELUMP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|186971855|gb|ACC98840.1| Aminoacyl-tRNA hydrolase [Elusimicrobium minutum Pei191]
Length = 187
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 87/162 (53%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A G++ N + + +G V LAKP T+MNLSG LA +YK+
Sbjct: 26 IVDNLAVKLGVNFNAYKNLGEYVKTTIGGQDVFLAKPLTFMNLSGRMVTHLAGFYKIKPQ 85
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV DD+ + G +R+R +G GG NG+K+++ F G ++ RLR G+G P + D
Sbjct: 86 EILVCFDDISINLGAVRIRKDGSAGGQNGMKNIIELF-GTQDIPRLRFGVGPKPERFDSA 144
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L KF+ + ++ +++ VE + + GL + FN
Sbjct: 145 DYVLSKFSKSDEKLLNESIEAAVEAAESCVKDGLERAMNKFN 186
>gi|434399577|ref|YP_007133581.1| Peptidyl-tRNA hydrolase [Stanieria cyanosphaera PCC 7437]
gi|428270674|gb|AFZ36615.1| Peptidyl-tRNA hydrolase [Stanieria cyanosphaera PCC 7437]
Length = 205
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 94/167 (56%), Gaps = 11/167 (6%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGD--AP----VLLAKPQTYMNLSGESTGPLAAYY 55
+DA A+S G++ K QG + + AP + L KP TYMN SG++ + +Y
Sbjct: 37 VDALADSWGLNWE----KNQRFQGLIAEGLAPNRSKIRLLKPLTYMNRSGQAVRAVIDWY 92
Query: 56 KLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPG 115
K+ VLV +DDM LP G LR+R +G GGHNG+KS++++ G + F RLRIGIG+ G
Sbjct: 93 KIAPESVLVIYDDMDLPIGKLRMRLSGSAGGHNGMKSIISHL-GTQNFPRLRIGIGKSDG 151
Query: 116 QMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+ + +L KF + + L+ ++ + L +G+ ++ +N
Sbjct: 152 NKETISHVLGKFAPTETKVVTDVLELAIKAVNFSLQEGVEKAMSLYN 198
>gi|441522688|ref|ZP_21004330.1| peptidyl-tRNA hydrolase [Gordonia sihwensis NBRC 108236]
gi|441457701|dbj|GAC62291.1| peptidyl-tRNA hydrolase [Gordonia sihwensis NBRC 108236]
Length = 188
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 91/135 (67%), Gaps = 2/135 (1%)
Query: 27 VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGG 86
+G PVL+AK +TYMN++G GPLA+YY + ++V HD++ + G +RL+ GG GG
Sbjct: 52 IGGEPVLVAKSRTYMNVTGRQIGPLASYYSVAPGDLIVLHDELDIDFGSVRLKLGGGEGG 111
Query: 87 HNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 146
HNGL+S+ G R++ R+R+GIGRPPG+ DP ++L+ F A+ ++ + GV+
Sbjct: 112 HNGLRSISQTL-GTRDYLRVRLGIGRPPGRQDPADYVLKPFPGSAKAEVELLVANGVDAA 170
Query: 147 KLLLSKGLTESARHF 161
+LL+ +GL E+A++
Sbjct: 171 ELLVKQGL-EAAQNV 184
>gi|417091647|ref|ZP_11956453.1| peptidyl-tRNA hydrolase [Streptococcus suis R61]
gi|353532953|gb|EHC02621.1| peptidyl-tRNA hydrolase [Streptococcus suis R61]
Length = 189
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 91/166 (54%), Gaps = 7/166 (4%)
Query: 1 MIDAFAESQGISMNTVHCK---ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL 57
++D A+ + ++ + H K A F+ + L KP T+MN SG++ L AYY L
Sbjct: 26 LLDKIAKRENVTFS--HDKIFQADIATTFIDGEKIYLVKPTTFMNESGKAVHALMAYYGL 83
Query: 58 PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQM 117
+LV +DD+ + G +R R G GGHNG+KS++ + G +EF R++IGIGRP G+M
Sbjct: 84 DATDILVAYDDLDMAVGKIRFRQKGSAGGHNGIKSIVKHI-GTQEFDRIKIGIGRPKGKM 142
Query: 118 DPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA-RHFN 162
+L F+ R ID AL + + + + L + ++ R FN
Sbjct: 143 SVVNHVLSGFDIEDRIEIDLALDKLDKAVNVYLEEDDFDTIMRKFN 188
>gi|408794222|ref|ZP_11205827.1| aminoacyl-tRNA hydrolase [Leptospira meyeri serovar Hardjo str.
Went 5]
gi|408461457|gb|EKJ85187.1| aminoacyl-tRNA hydrolase [Leptospira meyeri serovar Hardjo str.
Went 5]
Length = 188
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 87/151 (57%), Gaps = 3/151 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++DA A S G+S GD V L KP +MNLSG++T LA YK+P +
Sbjct: 27 ILDALASSFGVSFKDSKKYMETTHSLEGDK-VHLLKPLEFMNLSGKATQTLANLYKIPPS 85
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPP-GQMDP 119
R+LV D++ LP G ++ + GG GHNGLK ++ G+++F RLR G+G+P G M+
Sbjct: 86 RILVIQDEVDLPFGKIKNKIGGGTAGHNGLKDIVAKL-GSQDFHRLRFGVGKPEKGGMEV 144
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLL 150
F+LQ FN+ + +D ++E V ++ L
Sbjct: 145 ADFVLQNFNSEEKNSLDALIKESVTKIEDWL 175
>gi|384105379|ref|ZP_10006296.1| peptidyl-tRNA hydrolase [Rhodococcus imtechensis RKJ300]
gi|419962569|ref|ZP_14478559.1| peptidyl-tRNA hydrolase [Rhodococcus opacus M213]
gi|383835342|gb|EID74768.1| peptidyl-tRNA hydrolase [Rhodococcus imtechensis RKJ300]
gi|414571977|gb|EKT82680.1| peptidyl-tRNA hydrolase [Rhodococcus opacus M213]
Length = 190
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 89/135 (65%), Gaps = 1/135 (0%)
Query: 20 ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 79
A QG + P +LAKP+++MNLSG + LA ++ + ++V HD++ L G +RL+
Sbjct: 49 AEIVQGRLEGRPTILAKPRSFMNLSGSAVAGLARFFSVDPGNIVVIHDELDLDFGTIRLK 108
Query: 80 HNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTAL 139
GG GGHNGL+S+ + G +E+ R R+GIGRPPG+MDP +++L+ F++ R+ +D
Sbjct: 109 QGGGEGGHNGLRSISSAL-GTKEYLRTRVGIGRPPGRMDPASYVLKPFSSAERKELDLVC 167
Query: 140 QEGVEVLKLLLSKGL 154
+E + ++L+L GL
Sbjct: 168 EESADAVELVLRVGL 182
>gi|282898185|ref|ZP_06306176.1| Peptidyl-tRNA hydrolase [Raphidiopsis brookii D9]
gi|281196716|gb|EFA71621.1| Peptidyl-tRNA hydrolase [Raphidiopsis brookii D9]
Length = 213
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 96/172 (55%), Gaps = 11/172 (6%)
Query: 2 IDAFAESQGISMN-TVHCKATFGQGF-VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPL 59
IDA + + I + + FG+G +G + + KP TYMN SGES + ++YKLP
Sbjct: 38 IDALSRNWHIPVTENRKFQGQFGEGLALGSKKIRILKPLTYMNRSGESIQAVTSWYKLPP 97
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRP---PGQ 116
VLV +DDM LP G RLR +G GGHNG+KS +++ ++ F RLRIGIG+P P
Sbjct: 98 ESVLVIYDDMDLPLGKTRLRLSGSAGGHNGMKSTISHLN-SQNFPRLRIGIGKPKNLPNN 156
Query: 117 MDPK-----AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
+ + +L KF+ + ID L VE ++L L +G+ ++ N+
Sbjct: 157 SNNDDGGTVSHVLGKFSPQEAKLIDPILAFVVECVELTLKQGVEKAMNRCNS 208
>gi|218283271|ref|ZP_03489326.1| hypothetical protein EUBIFOR_01915 [Eubacterium biforme DSM 3989]
gi|218215961|gb|EEC89499.1| hypothetical protein EUBIFOR_01915 [Eubacterium biforme DSM 3989]
Length = 186
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 89/162 (54%), Gaps = 4/162 (2%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ + N A F + + ++L KP TYMN SG + +YK+
Sbjct: 26 IDKLAQMLEMDFNQEKFSAYFSKKKIDGEDIILLKPTTYMNNSGIALRQCMDFYKVSAED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+LV +DDM +P G LRLR G GGHNG+KS++++ G +EF R+RIGIG+ +M P
Sbjct: 86 ILVLYDDMDMPVGKLRLRQKGSAGGHNGIKSIISHI-GTQEFDRIRIGIGKD--KMIPVV 142
Query: 122 -FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L KF +E ++ AL++ + K + +++ +N
Sbjct: 143 DWVLGKFPQEQQEDLNHALEQAAKAAKFSIKHSFSDTMNRYN 184
>gi|332711589|ref|ZP_08431520.1| peptidyl-tRNA hydrolase [Moorea producens 3L]
gi|332349567|gb|EGJ29176.1| peptidyl-tRNA hydrolase [Moorea producens 3L]
Length = 214
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 93/164 (56%), Gaps = 3/164 (1%)
Query: 1 MIDAFAESQGISMNT-VHCKATFGQGF-VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLP 58
++DA A IS + + FGQG + + L KP TYMN SG++ + +YKL
Sbjct: 37 VVDAIAGRLQISGSEHRRFQGWFGQGIGLKGNKLSLLKPLTYMNRSGQAIRAVTDWYKLK 96
Query: 59 LNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMD 118
VL+ +DDM LP G LRLR +G GGHNG+KS + + G + F RLRIGIG+ + D
Sbjct: 97 PESVLIIYDDMDLPVGRLRLRLSGSAGGHNGMKSAIAHL-GTQNFPRLRIGIGKSSQKPD 155
Query: 119 PKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+ +L KF+ E + +Q VE ++L L +G+ ++ +N
Sbjct: 156 TISHVLGKFSPQEAELMSEVVQLAVEAVELSLKQGVEKAMSLYN 199
>gi|373454831|ref|ZP_09546693.1| peptidyl-tRNA hydrolase [Dialister succinatiphilus YIT 11850]
gi|371935415|gb|EHO63162.1| peptidyl-tRNA hydrolase [Dialister succinatiphilus YIT 11850]
Length = 190
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 86/166 (51%), Gaps = 1/166 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A +++ KA GQ V VLL KP TYMN SGE+ G +A YYK+ L+
Sbjct: 25 VIDELARRWHVTLWKEDMKAEIGQTLVNGEKVLLVKPLTYMNNSGEAVGAIARYYKVDLD 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+ + DD+ LP G R+R G GGHNG+KS++ + G+ F R RIG+G P
Sbjct: 85 DIYIICDDLDLPPGKTRIRKKGASGGHNGIKSLIAHL-GSENFNRFRIGVGHPQDGHTVV 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 166
+L + ++I+ A + ++ L G+ + FN +K
Sbjct: 144 EHVLSRPYGEDIQKIEDAKIHTADSIESALKDGVDHAMNVFNPKRK 189
>gi|386004018|ref|YP_005922297.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis RGTB423]
gi|380724506|gb|AFE12301.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis RGTB423]
Length = 191
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 81/123 (65%), Gaps = 1/123 (0%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
++LAKP+ YMN SG GPLA +Y + ++V HDD+ L G +RL+ GG GGHNGL+
Sbjct: 60 LVLAKPRCYMNESGRQIGPLAKFYSVAPANIIVIHDDLDLEFGRIRLKIGGGEGGHNGLR 119
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
SV+ G ++F R+RIGIGRPPG+ DP AF+L+ F R + T ++ + +LL+
Sbjct: 120 SVVAAL-GTKDFQRVRIGIGRPPGRKDPAAFVLENFTPAERAEVPTICEQAADATELLIE 178
Query: 152 KGL 154
+G+
Sbjct: 179 QGM 181
>gi|383788979|ref|YP_005473548.1| peptidyl-tRNA hydrolase [Caldisericum exile AZM16c01]
gi|381364616|dbj|BAL81445.1| peptidyl-tRNA hydrolase [Caldisericum exile AZM16c01]
Length = 189
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 91/166 (54%), Gaps = 6/166 (3%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVG----DAPVLLAKPQTYMNLSGESTGPLAAYYK 56
+ID +++ I +N A +G+G V + ++LAKP TYMNLSG + L +
Sbjct: 25 VIDELSKAWKIKVNFAKFNALYGKGTVNISGNEYNIILAKPLTYMNLSGRAVKQLMDGFL 84
Query: 57 LPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQ 116
+P ++V HDD+ LP G LR++ G GH G++S+ R+RIGIGRP +
Sbjct: 85 VPSTHIIVIHDDLDLPLGTLRIKVGGSDAGHKGVRSIKELVED--PIIRVRIGIGRPINK 142
Query: 117 MDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+ ++L++F + I ++ V+ ++ ++SKG+ + R FN
Sbjct: 143 EEVVNYVLEEFGKDEKFAILDVIKRSVKAIETIISKGVEVAQREFN 188
>gi|311740786|ref|ZP_07714613.1| aminoacyl-tRNA hydrolase [Corynebacterium pseudogenitalium ATCC
33035]
gi|311304306|gb|EFQ80382.1| aminoacyl-tRNA hydrolase [Corynebacterium pseudogenitalium ATCC
33035]
Length = 197
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 79/136 (58%), Gaps = 3/136 (2%)
Query: 11 ISMNTVHCKAT--FGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDD 68
+S +VH K +G G ++ AKP+++MNLSG L+ Y+ L ++V HD+
Sbjct: 57 MSSFSVHKKTNTEVAEGMAGGRKIICAKPRSFMNLSGGPIKALSQYFHLSPTDIIVVHDE 116
Query: 69 MGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFN 128
+ L G ++LR GG GHNGL+S + G +++ RL IGIGRPPG+MDP +F+L+ +
Sbjct: 117 LELDFGTVKLRKGGGDHGHNGLRSTTKSL-GTKDYQRLSIGIGRPPGRMDPASFVLKPWA 175
Query: 129 AIARERIDTALQEGVE 144
+ I + VE
Sbjct: 176 KQEKAEIPILCADAVE 191
>gi|346311930|ref|ZP_08853928.1| peptidyl-tRNA hydrolase [Collinsella tanakaei YIT 12063]
gi|345899667|gb|EGX69506.1| peptidyl-tRNA hydrolase [Collinsella tanakaei YIT 12063]
Length = 209
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 80/135 (59%), Gaps = 1/135 (0%)
Query: 28 GDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGH 87
G VLL KPQ++MN SG L A K+ + +LV HD++ +P G +R++ GGH GH
Sbjct: 67 GRREVLLVKPQSFMNTSGGPISKLCAQNKITVEELLVIHDELDIPEGDVRVKVGGGHAGH 126
Query: 88 NGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 147
NGL+S+++ G+R+F+R+R GIG PPG+M F+L++F E + +
Sbjct: 127 NGLRSIIDKM-GSRDFSRIRTGIGNPPGRMAVADFVLKQFRPKELEDFENTCARAADAAG 185
Query: 148 LLLSKGLTESARHFN 162
L L++G+ + H N
Sbjct: 186 LALTQGVVYARDHVN 200
>gi|393762744|ref|ZP_10351370.1| peptidyl-tRNA hydrolase [Alishewanella agri BL06]
gi|392606366|gb|EIW89251.1| peptidyl-tRNA hydrolase [Alishewanella agri BL06]
Length = 200
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 75/129 (58%)
Query: 37 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 96
P TYMNLSG++ +A +YKL ++LV HD++ LP G + + GGH GHNGL+ + +
Sbjct: 70 PTTYMNLSGKAVLAMAQFYKLAPEQILVVHDELALPPGSAKFKFAGGHAGHNGLRDITSK 129
Query: 97 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 156
N F RLR+GIG P + F+L K +A ++ ID +++E V +L GL +
Sbjct: 130 LGNNPNFYRLRLGIGHPGHKDQVTGFVLGKASASEQKLIDQSIEEAVACFAILARDGLVK 189
Query: 157 SARHFNTIQ 165
+ ++ Q
Sbjct: 190 AQSRLHSFQ 198
>gi|396585884|ref|ZP_10486049.1| aminoacyl-tRNA hydrolase [Actinomyces sp. ICM47]
gi|395546512|gb|EJG14133.1| aminoacyl-tRNA hydrolase [Actinomyces sp. ICM47]
Length = 200
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 81/126 (64%), Gaps = 1/126 (0%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
VLLA+ +YMN SG LA++ K+P R+LV HDDM LP LRL+ GG GGHNGLK
Sbjct: 68 VLLARSDSYMNTSGGPISALASFLKVPPARILVIHDDMDLPAHTLRLKVGGGEGGHNGLK 127
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ + R++ARLRIG+GRPPG+MDP ++L + R D ++ +V++ +++
Sbjct: 128 SLTQHLH-TRDYARLRIGVGRPPGRMDPADYVLAALPSKERPDWDVTFEQAADVVEDIVT 186
Query: 152 KGLTES 157
KG +
Sbjct: 187 KGFAPT 192
>gi|15608154|ref|NP_215530.1| Probable peptidyl-tRNA hydrolase Pth [Mycobacterium tuberculosis
H37Rv]
gi|15840442|ref|NP_335479.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis CDC1551]
gi|31792205|ref|NP_854698.1| peptidyl-tRNA hydrolase [Mycobacterium bovis AF2122/97]
gi|121636943|ref|YP_977166.1| peptidyl-tRNA hydrolase [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148660796|ref|YP_001282319.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis H37Ra]
gi|148822223|ref|YP_001286977.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis F11]
gi|167968127|ref|ZP_02550404.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis H37Ra]
gi|224989415|ref|YP_002644102.1| peptidyl-tRNA hydrolase [Mycobacterium bovis BCG str. Tokyo 172]
gi|253799956|ref|YP_003032957.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis KZN 1435]
gi|254231308|ref|ZP_04924635.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis C]
gi|254363930|ref|ZP_04979976.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis str.
Haarlem]
gi|254549999|ref|ZP_05140446.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|289442435|ref|ZP_06432179.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis T46]
gi|289446595|ref|ZP_06436339.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis CPHL_A]
gi|289568992|ref|ZP_06449219.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis T17]
gi|289573654|ref|ZP_06453881.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis K85]
gi|289744750|ref|ZP_06504128.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis 02_1987]
gi|289749544|ref|ZP_06508922.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis T92]
gi|289753075|ref|ZP_06512453.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis EAS054]
gi|289757096|ref|ZP_06516474.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis T85]
gi|289761150|ref|ZP_06520528.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis GM 1503]
gi|294995203|ref|ZP_06800894.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis 210]
gi|297633540|ref|ZP_06951320.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis KZN 4207]
gi|297730525|ref|ZP_06959643.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis KZN R506]
gi|298524510|ref|ZP_07011919.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis 94_M4241A]
gi|306775149|ref|ZP_07413486.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu001]
gi|306781936|ref|ZP_07420273.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu002]
gi|306783709|ref|ZP_07422031.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu003]
gi|306788064|ref|ZP_07426386.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu004]
gi|306792397|ref|ZP_07430699.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu005]
gi|306796800|ref|ZP_07435102.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu006]
gi|306802686|ref|ZP_07439354.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu008]
gi|306806865|ref|ZP_07443533.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu007]
gi|306967066|ref|ZP_07479727.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu009]
gi|306971256|ref|ZP_07483917.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu010]
gi|307083545|ref|ZP_07492658.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu012]
gi|313657854|ref|ZP_07814734.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis KZN V2475]
gi|339631075|ref|YP_004722717.1| peptidyl-tRNA hydrolase [Mycobacterium africanum GM041182]
gi|340626025|ref|YP_004744477.1| putative peptidyl-tRNA hydrolase PTH [Mycobacterium canettii CIPT
140010059]
gi|375297194|ref|YP_005101461.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis KZN 4207]
gi|378770777|ref|YP_005170510.1| peptidyl-tRNA hydrolase [Mycobacterium bovis BCG str. Mexico]
gi|383306895|ref|YP_005359706.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis RGTB327]
gi|385990463|ref|YP_005908761.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis CCDC5180]
gi|385994062|ref|YP_005912360.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis CCDC5079]
gi|385997794|ref|YP_005916092.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis CTRI-2]
gi|392385721|ref|YP_005307350.1| pth [Mycobacterium tuberculosis UT205]
gi|392433397|ref|YP_006474441.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis KZN 605]
gi|397672840|ref|YP_006514375.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis H37Rv]
gi|422811973|ref|ZP_16860367.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis CDC1551A]
gi|424805483|ref|ZP_18230914.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis W-148]
gi|424946763|ref|ZP_18362459.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis NCGM2209]
gi|433626110|ref|YP_007259739.1| Putative peptidyl-tRNA hydrolase Pth [Mycobacterium canettii CIPT
140060008]
gi|449063061|ref|YP_007430144.1| Peptidyl-tRNA hydrolase [Mycobacterium bovis BCG str. Korea 1168P]
gi|54038905|sp|P65866.1|PTH_MYCBO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|54041591|sp|P65865.1|PTH_MYCTU RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166229421|sp|A1KHF2.1|PTH_MYCBP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166229425|sp|A5U157.1|PTH_MYCTA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783880|sp|C1AM05.1|PTH_MYCBT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|157836744|pdb|2Z2I|A Chain A, Crystal Structure Of Peptidyl-Trna Hydrolase From
Mycobacterium Tuberculosis
gi|157836745|pdb|2Z2J|A Chain A, Crystal Structure Of Peptidyl-trna Hydrolase From
Mycobacterium Tuberculosis
gi|157836746|pdb|2Z2J|B Chain B, Crystal Structure Of Peptidyl-trna Hydrolase From
Mycobacterium Tuberculosis
gi|157836747|pdb|2Z2K|A Chain A, Crystal Structure Of Peptidyl-Trna Hydrolase From
Mycobacterium Tuberculosis
gi|375332471|pdb|3TCK|A Chain A, Crystal Structure Of Peptidyl-Trna Hydrolase From
Mycobacterium Tuberculosis - Form 4
gi|375332472|pdb|3TCN|A Chain A, Crystal Structures Of Peptidyl-Trna Hydrolase From
Mycobacterium Tuberculosis - Form 2 Grown In Presence Of
Pentaglycine
gi|375332473|pdb|3TCN|B Chain B, Crystal Structures Of Peptidyl-Trna Hydrolase From
Mycobacterium Tuberculosis - Form 2 Grown In Presence Of
Pentaglycine
gi|375332474|pdb|3TD2|A Chain A, Crystal Structures Of Peptidyl-Trna Hydrolase From
Mycobacterium Tuberculosis - Form 5
gi|375332475|pdb|3TD6|A Chain A, Peptidyl-Trna Hydrolase From Mycobacterium Tuberculosis
From Trigonal Partially Dehydrated Crystal
gi|13880613|gb|AAK45293.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis CDC1551]
gi|31617793|emb|CAD93902.1| PROBABLE PEPTIDYL-TRNA HYDROLASE PTH [Mycobacterium bovis
AF2122/97]
gi|121492590|emb|CAL71058.1| Probable peptidyl-trna hydrolase pth [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|124600367|gb|EAY59377.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis C]
gi|134149444|gb|EBA41489.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis str.
Haarlem]
gi|148504948|gb|ABQ72757.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis H37Ra]
gi|148720750|gb|ABR05375.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis F11]
gi|224772528|dbj|BAH25334.1| peptidyl-tRNA hydrolase [Mycobacterium bovis BCG str. Tokyo 172]
gi|253321459|gb|ACT26062.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis KZN 1435]
gi|289415354|gb|EFD12594.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis T46]
gi|289419553|gb|EFD16754.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis CPHL_A]
gi|289538085|gb|EFD42663.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis K85]
gi|289542746|gb|EFD46394.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis T17]
gi|289685278|gb|EFD52766.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis 02_1987]
gi|289690131|gb|EFD57560.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis T92]
gi|289693662|gb|EFD61091.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis EAS054]
gi|289708656|gb|EFD72672.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis GM 1503]
gi|289712660|gb|EFD76672.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis T85]
gi|298494304|gb|EFI29598.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis 94_M4241A]
gi|308216299|gb|EFO75698.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu001]
gi|308325327|gb|EFP14178.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu002]
gi|308331492|gb|EFP20343.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu003]
gi|308335298|gb|EFP24149.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu004]
gi|308339106|gb|EFP27957.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu005]
gi|308342778|gb|EFP31629.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu006]
gi|308346687|gb|EFP35538.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu007]
gi|308350602|gb|EFP39453.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu008]
gi|308355235|gb|EFP44086.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu009]
gi|308359190|gb|EFP48041.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu010]
gi|308366756|gb|EFP55607.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu012]
gi|323720514|gb|EGB29596.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis CDC1551A]
gi|326904759|gb|EGE51692.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis W-148]
gi|328459699|gb|AEB05122.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis KZN 4207]
gi|339294016|gb|AEJ46127.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis CCDC5079]
gi|339297656|gb|AEJ49766.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis CCDC5180]
gi|339330431|emb|CCC26096.1| putative peptidyl-tRNA hydrolase PTH [Mycobacterium africanum
GM041182]
gi|340004215|emb|CCC43355.1| putative peptidyl-tRNA hydrolase PTH [Mycobacterium canettii CIPT
140010059]
gi|341600959|emb|CCC63630.1| probable peptidyl-trna hydrolase pth [Mycobacterium bovis BCG str.
Moreau RDJ]
gi|344218840|gb|AEM99470.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis CTRI-2]
gi|356593098|gb|AET18327.1| Peptidyl-tRNA hydrolase [Mycobacterium bovis BCG str. Mexico]
gi|358231278|dbj|GAA44770.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis NCGM2209]
gi|378544272|emb|CCE36545.1| pth [Mycobacterium tuberculosis UT205]
gi|380720848|gb|AFE15957.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis RGTB327]
gi|392054806|gb|AFM50364.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis KZN 605]
gi|395137745|gb|AFN48904.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis H37Rv]
gi|432153716|emb|CCK50939.1| Putative peptidyl-tRNA hydrolase Pth [Mycobacterium canettii CIPT
140060008]
gi|440580484|emb|CCG10887.1| putative PEPTIDYL-TRNA HYDROLASE PTH [Mycobacterium tuberculosis
7199-99]
gi|444894509|emb|CCP43764.1| Probable peptidyl-tRNA hydrolase Pth [Mycobacterium tuberculosis
H37Rv]
gi|449031569|gb|AGE66996.1| Peptidyl-tRNA hydrolase [Mycobacterium bovis BCG str. Korea 1168P]
Length = 191
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 81/123 (65%), Gaps = 1/123 (0%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
++LAKP+ YMN SG GPLA +Y + ++V HDD+ L G +RL+ GG GGHNGL+
Sbjct: 60 LVLAKPRCYMNESGRQIGPLAKFYSVAPANIIVIHDDLDLEFGRIRLKIGGGEGGHNGLR 119
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
SV+ G ++F R+RIGIGRPPG+ DP AF+L+ F R + T ++ + +LL+
Sbjct: 120 SVVAAL-GTKDFQRVRIGIGRPPGRKDPAAFVLENFTPAERAEVPTICEQAADATELLIE 178
Query: 152 KGL 154
+G+
Sbjct: 179 QGM 181
>gi|256828486|ref|YP_003157214.1| peptidyl-tRNA hydrolase [Desulfomicrobium baculatum DSM 4028]
gi|256577662|gb|ACU88798.1| peptidyl-tRNA hydrolase [Desulfomicrobium baculatum DSM 4028]
Length = 198
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 81/131 (61%), Gaps = 1/131 (0%)
Query: 33 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 92
++AKP T+MNLSG+ G L+ ++P +R+LV HD++ L G +RL+ +GG GHNGLKS
Sbjct: 68 IVAKPLTFMNLSGQVVGELSRKNEIPADRILVAHDELDLALGTVRLKFSGGLAGHNGLKS 127
Query: 93 VMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 152
V + G R+FAR+R+GIGRP G ++L+ F E++ AL + + S+
Sbjct: 128 VAAHL-GTRDFARIRLGIGRPEGSEAMADYVLRSFMPAEWEQVAQALGIARDAVLHYCSE 186
Query: 153 GLTESARHFNT 163
GLT + ++
Sbjct: 187 GLTAATSRLHS 197
>gi|427430893|ref|ZP_18920607.1| Peptidyl-tRNA hydrolase [Caenispirillum salinarum AK4]
gi|425878384|gb|EKV27101.1| Peptidyl-tRNA hydrolase [Caenispirillum salinarum AK4]
Length = 255
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 87/162 (53%), Gaps = 5/162 (3%)
Query: 3 DAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRV 62
D G S +A + G +G V++ KP TYMNLSG+S G ++K+ V
Sbjct: 27 DEIVRRHGFSAWKSKFQADYADGMIGGEKVMVLKPMTYMNLSGQSVGDACRFFKILPRDV 86
Query: 63 LVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAF 122
+V +D++ L G +R++ GGH GHNGL+S+ + +++ R+R+G+GRPPG+ +
Sbjct: 87 IVLYDEIELAPGKIRVKQGGGHAGHNGLRSIDQHI--GKDYWRVRLGVGRPPGKEQVAKY 144
Query: 123 LLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTI 164
+L F+ A E T L E V L+ KG + R N +
Sbjct: 145 VLHDFSK-AEEAWLTPLLESVATHMPLMVKG--DEGRFMNKV 183
>gi|331268337|ref|YP_004394829.1| aminoacyl-tRNA hydrolase [Clostridium botulinum BKT015925]
gi|329124887|gb|AEB74832.1| Aminoacyl-tRNA hydrolase [Clostridium botulinum BKT015925]
Length = 186
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 87/161 (54%), Gaps = 2/161 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
I+ AE I N K +G G + V+L KP TYMNLSGES + +YK+
Sbjct: 22 IELLAEKYNIEFNRKKFKGMYGDGTIAGEKVILLKPLTYMNLSGESVREVMDFYKITNED 81
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DD+ L G +R+R G GGHNG+K+++ + + F R+++G+G P + + +
Sbjct: 82 IIVIYDDISLEVGRMRIREKGSAGGHNGIKNIIAHLNTDH-FPRVKVGVGHPV-KTNLVS 139
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+L KF +++ + +++++ KG E+ FN
Sbjct: 140 HVLGKFEKEDECKLNKTFEAACNAVQIIIEKGTAEAMNKFN 180
>gi|218885593|ref|YP_002434914.1| peptidyl-tRNA hydrolase [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|226723248|sp|B8DKL7.1|PTH_DESVM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|218756547|gb|ACL07446.1| Aminoacyl-tRNA hydrolase [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 202
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 78/123 (63%), Gaps = 1/123 (0%)
Query: 31 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 90
P L+AKPQT+MNLSGE+ +A+YY++ + +LV HD++ +P G ++ + GG+ GHNGL
Sbjct: 67 PWLVAKPQTFMNLSGEAVLAIASYYRIKPDAILVVHDELDIPLGRMKFKTGGGNAGHNGL 126
Query: 91 KSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 150
KS+ G +F RLR+GIGR P + ++L + + + +DT L V+ + +
Sbjct: 127 KSI-TQLLGTPDFHRLRLGIGRSPHGGETTNWVLGRLSGPEQTLLDTLLPAAVQAMTIFA 185
Query: 151 SKG 153
S+G
Sbjct: 186 SQG 188
>gi|365852726|ref|ZP_09393083.1| aminoacyl-tRNA hydrolase [Lactobacillus parafarraginis F0439]
gi|363714302|gb|EHL97835.1| aminoacyl-tRNA hydrolase [Lactobacillus parafarraginis F0439]
Length = 186
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 84/151 (55%), Gaps = 8/151 (5%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+++AFA+ GI++ T A G F+ VL+ +P T+MN SG + PL Y+ +
Sbjct: 25 VVEAFAKKHGINIKTRKMNAKLGSDFLNGTKVLVVEPTTFMNDSGIAVKPLMDYFDVKPE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V+V HDDM LP G +R++ G GGHNG+KS++ N G+ F R+R+GI P
Sbjct: 85 DVIVVHDDMDLPIGKIRIKDKGSAGGHNGIKSIIANL-GSENFCRIRVGIQHPAKNNTVV 143
Query: 121 AFLLQKFN-------AIARERIDTALQEGVE 144
++L +F+ +A + AL++ V+
Sbjct: 144 NYVLGRFSKDQLPEFKMASDHAVNALEDWVD 174
>gi|212711985|ref|ZP_03320113.1| hypothetical protein PROVALCAL_03061 [Providencia alcalifaciens DSM
30120]
gi|422018287|ref|ZP_16364844.1| peptidyl-tRNA hydrolase [Providencia alcalifaciens Dmel2]
gi|212685507|gb|EEB45035.1| hypothetical protein PROVALCAL_03061 [Providencia alcalifaciens DSM
30120]
gi|414104579|gb|EKT66144.1| peptidyl-tRNA hydrolase [Providencia alcalifaciens Dmel2]
Length = 196
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 78/131 (59%)
Query: 27 VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGG 86
+G + L P T+MNLSG+S +A +Y++ + +LV HD++ LP GV +++ G +GG
Sbjct: 55 IGGNDIRLLVPTTFMNLSGKSVAAVANFYRINPDEILVAHDELDLPPGVAKMKLGGSNGG 114
Query: 87 HNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 146
HNGLK + + F N F RLRIGIG P + F+L K ++ ID A+ E V
Sbjct: 115 HNGLKDIQSKFANNPNFYRLRIGIGHPGDKNKVVGFVLGKPPLSEQKLIDDAIDESVRCT 174
Query: 147 KLLLSKGLTES 157
+LLS G+ ++
Sbjct: 175 DILLSDGMDKA 185
>gi|432333917|ref|ZP_19585651.1| peptidyl-tRNA hydrolase, partial [Rhodococcus wratislaviensis IFP
2016]
gi|430779160|gb|ELB94349.1| peptidyl-tRNA hydrolase, partial [Rhodococcus wratislaviensis IFP
2016]
Length = 154
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 88/131 (67%), Gaps = 1/131 (0%)
Query: 24 QGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGG 83
QG + P +LAKP+++MNLSG + LA ++ + ++V HD++ L G +RL+ GG
Sbjct: 17 QGRLEGRPTILAKPRSFMNLSGSAVAGLARFFSVDPGNIVVIHDELDLDFGTIRLKQGGG 76
Query: 84 HGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGV 143
GGHNGL+S+ + G +E+ R R+GIGRPPG+MDP +++L+ F++ R+ +D +E
Sbjct: 77 EGGHNGLRSISSAL-GTKEYLRTRVGIGRPPGRMDPASYVLKPFSSAERKELDLVCEESA 135
Query: 144 EVLKLLLSKGL 154
+ ++L+L GL
Sbjct: 136 DAVELVLRVGL 146
>gi|302877723|ref|YP_003846287.1| peptidyl-tRNA hydrolase [Gallionella capsiferriformans ES-2]
gi|302580512|gb|ADL54523.1| peptidyl-tRNA hydrolase [Gallionella capsiferriformans ES-2]
Length = 192
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 90/162 (55%), Gaps = 9/162 (5%)
Query: 1 MIDAFAESQGISMNTVHCKATF----GQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYK 56
+D AE ++ + +A F +G V ++L KPQT+MNLSG S G LA +YK
Sbjct: 28 WVDELAEEAELNFKS---EAKFHGLSARGLVLGRELILLKPQTFMNLSGRSVGALAQFYK 84
Query: 57 LPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQ 116
+ ++LV HD++ L G+ RL+ G HGGHNGLK ++ G REF RLR+GIG P +
Sbjct: 85 IAPAQILVVHDELDLQPGIARLKLGGSHGGHNGLKDIIAQL-GGREFWRLRLGIGHPGDR 143
Query: 117 MDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 158
F+L RE + A + ++VL +L G E+A
Sbjct: 144 AQVSDFVLGHPREAERELMLEAQHQSMQVLPSVLD-GKMEAA 184
>gi|397690859|ref|YP_006528113.1| peptidyl-tRNA hydrolase [Melioribacter roseus P3M]
gi|395812351|gb|AFN75100.1| peptidyl-tRNA hydrolase [Melioribacter roseus P3M]
Length = 192
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 93/165 (56%), Gaps = 3/165 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D FA+ Q ++ N + +G +G + +L KP T+MNLSG + L + Y++P
Sbjct: 25 VLDRFAKLQKLNFNPEYNYLK-SEGSIGSSDFILVKPTTFMNLSGLAAKNLLSNYEIPTE 83
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV DD+ L G LR+R +GG GGHNGLKS++ + F RLR GIG P +
Sbjct: 84 EMLVITDDIYLESGKLRIRRSGGDGGHNGLKSIIEHLE-TTNFPRLRFGIG-DPAESTLS 141
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQ 165
++L F+ + ID ++++ V++L+ ++ G HF+ I
Sbjct: 142 EYVLSPFSENELKIIDISVEKAVQLLEYFVAGGYKAMLDHFSKIS 186
>gi|308274566|emb|CBX31165.1| Peptidyl-tRNA hydrolase [uncultured Desulfobacterium sp.]
Length = 201
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 87/162 (53%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A++ I + + +G+G + V+LAKP +MN SG L+ YYK+
Sbjct: 32 VIDELADAFSIPVEKNKYETIYGRGLIKGIDVILAKPVAFMNRSGPPIYSLSNYYKILQK 91
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+L+ HDD+ L G +++ GG GGH G+KS+++ F GN +R+RIGIGR +
Sbjct: 92 DILIIHDDVDLAFGRIKINPKGGSGGHKGIKSLIDTF-GNNNISRIRIGIGRSESGISVA 150
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L KFN ++ + + ++ G+TE+ FN
Sbjct: 151 DYVLGKFNIKENNELNLINKAARDAAVTIIYSGITEAMNIFN 192
>gi|406667824|ref|ZP_11075576.1| Peptidyl-tRNA hydrolase [Bacillus isronensis B3W22]
gi|405384339|gb|EKB43786.1| Peptidyl-tRNA hydrolase [Bacillus isronensis B3W22]
Length = 191
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 87/162 (53%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A +N + + V+L KP TYMNLSGE PL Y+ + +
Sbjct: 29 VIDELANRWNAPLNQTKFNGMYATVHRPEGKVILLKPLTYMNLSGECVRPLMDYFDIEIE 88
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ L G LRLR G GGHNG+KS++ + G +EF R+R+G+ RPP M
Sbjct: 89 DIIVIYDDLDLETGKLRLRGKGSAGGHNGIKSLIQHL-GTQEFNRIRVGVSRPPAGMKVA 147
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L KF+ + + A+++ + ++ L+K E FN
Sbjct: 148 DYVLAKFSKEDQPIVKEAVEKSCDAVETALTKPFLEVMNKFN 189
>gi|403738636|ref|ZP_10951237.1| peptidyl-tRNA hydrolase [Austwickia chelonae NBRC 105200]
gi|403191286|dbj|GAB78007.1| peptidyl-tRNA hydrolase [Austwickia chelonae NBRC 105200]
Length = 119
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 71/114 (62%), Gaps = 1/114 (0%)
Query: 41 MNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGN 100
MN SG T LAA++ +P V+V HDD+ P G +RLR G GHNGL+S+ + R
Sbjct: 1 MNESGAPTAALAAFFSVPAASVIVVHDDLETPFGQVRLRRGGSEAGHNGLRSISSALR-T 59
Query: 101 REFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 154
R++ R+R+GIGRPPG+M F+L+ F A R+ + L + V+V++ L+ G
Sbjct: 60 RDYVRVRVGIGRPPGRMSVADFVLRDFGATERKELPFVLGDAVDVIEELVLHGF 113
>gi|111022659|ref|YP_705631.1| peptidyl-tRNA hydrolase [Rhodococcus jostii RHA1]
gi|119390996|sp|Q0S4R3.1|PTH_RHOSR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|110822189|gb|ABG97473.1| aminoacyl-tRNA hydrolase [Rhodococcus jostii RHA1]
Length = 190
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 89/135 (65%), Gaps = 1/135 (0%)
Query: 20 ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 79
A QG P +LAKP+++MNLSG + LA ++ + ++V HD++ L G +RL+
Sbjct: 49 AEIVQGRFEGRPTILAKPRSFMNLSGSAVAGLARFFSVDPGNIVVIHDELDLDFGTIRLK 108
Query: 80 HNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTAL 139
GG GGHNGL+S+ + G +++ R R+GIGRPPG+MDP +++L+ F+++ R+ +D
Sbjct: 109 QGGGEGGHNGLRSISSAL-GTKDYLRTRVGIGRPPGRMDPASYVLKPFSSVERKELDLVC 167
Query: 140 QEGVEVLKLLLSKGL 154
+E + ++L+L GL
Sbjct: 168 EESADAVELVLRVGL 182
>gi|339022202|ref|ZP_08646163.1| peptidyl-tRNA hydrolase [Acetobacter tropicalis NBRC 101654]
gi|338750781|dbj|GAA09467.1| peptidyl-tRNA hydrolase [Acetobacter tropicalis NBRC 101654]
Length = 193
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 83/155 (53%), Gaps = 1/155 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+DA AE G S K +G VG+ VLL +P TYMNLSG S AA+YK+ ++
Sbjct: 26 VDAIAERYGFSPWRNRFKGEVAEGRVGNQRVLLLRPMTYMNLSGTSVQEAAAFYKIAPDQ 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+ FHD++ L G +R++ GG GHNGL+S M+ G ++ R+RIGIG P +
Sbjct: 86 ITAFHDELDLAAGKVRVKRGGGAAGHNGLRS-MDKMLGTPDYWRVRIGIGHPGAKERVHG 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 156
++L F R+ L + + LL+ G E
Sbjct: 145 WVLGNFTESDRQDWLEPLLDKMAAAAPLLADGQPE 179
>gi|183220682|ref|YP_001838678.1| peptidyl-tRNA hydrolase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189910783|ref|YP_001962338.1| peptidyl-tRNA hydrolase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167775459|gb|ABZ93760.1| Peptidyl -tRNA hydrolase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167779104|gb|ABZ97402.1| Peptidyl-tRNA hydrolase (PTH) [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 188
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 86/148 (58%), Gaps = 3/148 (2%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A G+S A + GD + L KP +MNLSG++T LA YK+P +
Sbjct: 27 ILDRLATEFGVSFKDAKKYAETTYSWEGDK-IHLLKPLEFMNLSGKATQTLANLYKIPPS 85
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPP-GQMDP 119
++LV D++ LP G ++ + GG GHNGLK ++ G+++F RLR G+G+P G M+
Sbjct: 86 QILVVQDEVDLPFGKIKNKIGGGTAGHNGLKDIVAKL-GSQDFHRLRFGVGKPEKGGMEV 144
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLK 147
F+LQ FNA R +D+ + E V L+
Sbjct: 145 ADFVLQNFNAEERNTLDSLITESVSKLQ 172
>gi|451943682|ref|YP_007464318.1| peptidyl-tRNA hydrolase [Corynebacterium halotolerans YIM 70093 =
DSM 44683]
gi|451903069|gb|AGF71956.1| peptidyl-tRNA hydrolase [Corynebacterium halotolerans YIM 70093 =
DSM 44683]
Length = 184
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 74/119 (62%), Gaps = 6/119 (5%)
Query: 15 TVHCK-----ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDM 69
TVH + A G +G V+LA+ +++MNLSG LA Y+ + V+V HD++
Sbjct: 45 TVHKRSNTEIAELPAGRLGARKVVLARTRSFMNLSGGPVKALATYFAVAPADVIVIHDEL 104
Query: 70 GLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFN 128
L GV+RLR GG GHNGLKSV + G +++ RL IGIGRPPG+MDP F+L+ F
Sbjct: 105 ELDFGVVRLRTGGGDHGHNGLKSVTKSL-GTKDYQRLAIGIGRPPGRMDPAGFVLKPFT 162
>gi|380031550|ref|YP_004888541.1| peptidyl-tRNA hydrolase [Lactobacillus plantarum WCFS1]
gi|38257843|sp|Q88Z39.1|PTH_LACPL RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|342240793|emb|CCC78027.1| peptidyl-tRNA hydrolase [Lactobacillus plantarum WCFS1]
Length = 185
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 77/138 (55%), Gaps = 2/138 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A ++ T +A F +LL KP TYMN SG + GPL +YY +
Sbjct: 25 IVDELASKLNVTFQTSKFEAQVATAFQDGEKILLVKPATYMNDSGRAVGPLMSYYNVDPA 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV HDD+ LP G +RL+ G GGHNG+KS++++ G++ F R+++GI P +M
Sbjct: 85 DLLVIHDDLDLPLGKVRLKQKGSAGGHNGIKSIISHV-GDQHFKRVKVGIDHPQ-KMSVV 142
Query: 121 AFLLQKFNAIARERIDTA 138
++L KF + D A
Sbjct: 143 DYVLGKFTPAEVAKFDDA 160
>gi|418016904|ref|ZP_12656463.1| peptidyl-tRNA hydrolase [Streptococcus salivarius M18]
gi|345527597|gb|EGX30905.1| peptidyl-tRNA hydrolase [Streptococcus salivarius M18]
Length = 189
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 80/146 (54%), Gaps = 9/146 (6%)
Query: 2 IDAFAESQGISMNTVHC-KATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
ID A+ G++ + KA F+ D V KP T+MNLSG + L AYY +P+
Sbjct: 27 IDLMAKELGLTFSEEKTFKAEVASTFLNDEKVYFVKPTTFMNLSGLAVRALLAYYNIPME 86
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+V +DD+ + G LR R G GGHNG+KS++ G +EF R++IGIGRP M
Sbjct: 87 DFIVIYDDLDMEVGKLRFRQKGSAGGHNGIKSIIAE-TGTQEFDRIKIGIGRPQKGMTVV 145
Query: 121 AFLLQKFNA-------IARERIDTAL 139
+L KF+ + ++++TAL
Sbjct: 146 NHVLGKFSEDDYATILLTLDKVETAL 171
>gi|160914797|ref|ZP_02077011.1| hypothetical protein EUBDOL_00804 [Eubacterium dolichum DSM 3991]
gi|158433337|gb|EDP11626.1| aminoacyl-tRNA hydrolase [Eubacterium dolichum DSM 3991]
Length = 186
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 88/162 (54%), Gaps = 2/162 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++DA A+ + +N KA Q +G VLL KPQTYMNLSGE+ +Y + +
Sbjct: 25 VMDAIAKECNVEINQKKFKALVAQTRIGKESVLLMKPQTYMNLSGEALIQAVNFYHIDIK 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV +DD+ LP G +RLR G GG NG+K+++ + +EF R+R+GIG+ ++
Sbjct: 85 DILVIYDDLDLPVGKIRLREKGSAGGQNGMKNIIQHLH-TQEFNRIRVGIGK-DARVPVI 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L K +E + A+++ + S ++ +N
Sbjct: 143 DWVLGKIRKEEQEAYEQAIKQACDAAIYSCSHSFIDTMSAYN 184
>gi|229819487|ref|YP_002881013.1| peptidyl-tRNA hydrolase [Beutenbergia cavernae DSM 12333]
gi|229565400|gb|ACQ79251.1| peptidyl-tRNA hydrolase [Beutenbergia cavernae DSM 12333]
Length = 199
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 91/158 (57%), Gaps = 8/158 (5%)
Query: 3 DAFAESQGISMNTVHCKATFGQGFVGDAP-------VLLAKPQTYMNLSGESTGPLAAYY 55
D A G + T +A G +G P V++AKP TY+NLSG L+ +Y
Sbjct: 31 DVLASRIGSAFTTHKARAAVVDGRLGTLPGGVPGPRVIVAKPATYVNLSGGPVAALSTFY 90
Query: 56 KLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPG 115
+P R+LV +D++ LP LRL+ GG GGHNGL+S+ G R++ RLRIGIGRPPG
Sbjct: 91 DIPAERLLVVYDELDLPAHTLRLKLGGGEGGHNGLRSISAAL-GTRDYVRLRIGIGRPPG 149
Query: 116 QMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 153
+ DP F+L+ F+A R + L++ + ++ ++ G
Sbjct: 150 RQDPADFVLRDFSAAERVELGVTLEQAADAVEDVVVHG 187
>gi|319789279|ref|YP_004150912.1| peptidyl-tRNA hydrolase [Thermovibrio ammonificans HB-1]
gi|317113781|gb|ADU96271.1| peptidyl-tRNA hydrolase [Thermovibrio ammonificans HB-1]
Length = 188
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 83/151 (54%), Gaps = 1/151 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A+ G+S+N K +G+ + V+L KP TYMN SGES Y+K+
Sbjct: 26 VLDRLADKLGVSLNREKFKGLYGEYRGENGKVILLKPLTYMNRSGESVSQFLRYFKIAPE 85
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ LP G LRL+ G GGH G++S++ G F RL++GIGRP + +
Sbjct: 86 EMVVVYDDLDLPLGKLRLKPKGSSGGHRGVESIIREL-GTSNFPRLKVGIGRPARKEEVV 144
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
++L F I+ A+ + L LL+S
Sbjct: 145 DYVLSPFGREQWPAIEEAVDRASDCLNLLIS 175
>gi|433630118|ref|YP_007263746.1| Putative peptidyl-tRNA hydrolase Pth [Mycobacterium canettii CIPT
140070010]
gi|433634075|ref|YP_007267702.1| Putative peptidyl-tRNA hydrolase Pth [Mycobacterium canettii CIPT
140070017]
gi|433641145|ref|YP_007286904.1| Putative peptidyl-tRNA hydrolase Pth [Mycobacterium canettii CIPT
140070008]
gi|432157693|emb|CCK54971.1| Putative peptidyl-tRNA hydrolase Pth [Mycobacterium canettii CIPT
140070008]
gi|432161711|emb|CCK59056.1| Putative peptidyl-tRNA hydrolase Pth [Mycobacterium canettii CIPT
140070010]
gi|432165668|emb|CCK63146.1| Putative peptidyl-tRNA hydrolase Pth [Mycobacterium canettii CIPT
140070017]
Length = 191
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 81/123 (65%), Gaps = 1/123 (0%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
++LAKP+ YMN SG GPLA +Y + ++V HDD+ L G +RL+ GG GGHNGL+
Sbjct: 60 LVLAKPRCYMNESGRQIGPLAKFYSVAPANIIVIHDDLDLEFGRIRLKIGGGEGGHNGLR 119
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
SV+ G ++F R+RIGIGRPPG+ DP AF+L+ F R + T ++ + +LL+
Sbjct: 120 SVVAAL-GTKDFQRVRIGIGRPPGRKDPAAFVLENFTPAERAEVPTICEQAADATELLIE 178
Query: 152 KGL 154
+G+
Sbjct: 179 QGM 181
>gi|254555606|ref|YP_003062023.1| peptidyl-tRNA hydrolase [Lactobacillus plantarum JDM1]
gi|300768956|ref|ZP_07078847.1| aminoacyl-tRNA hydrolase [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|308179636|ref|YP_003923764.1| peptidyl-tRNA hydrolase [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|418274205|ref|ZP_12889703.1| peptidyl-tRNA hydrolase [Lactobacillus plantarum subsp. plantarum
NC8]
gi|448820207|ref|YP_007413369.1| Peptidyl-tRNA hydrolase [Lactobacillus plantarum ZJ316]
gi|254044533|gb|ACT61326.1| peptidyl-tRNA hydrolase [Lactobacillus plantarum JDM1]
gi|300493477|gb|EFK28654.1| aminoacyl-tRNA hydrolase [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|308045127|gb|ADN97670.1| peptidyl-tRNA hydrolase [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|376009771|gb|EHS83097.1| peptidyl-tRNA hydrolase [Lactobacillus plantarum subsp. plantarum
NC8]
gi|448273704|gb|AGE38223.1| Peptidyl-tRNA hydrolase [Lactobacillus plantarum ZJ316]
Length = 185
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 77/138 (55%), Gaps = 2/138 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A ++ T +A F +LL KP TYMN SG + GPL +YY +
Sbjct: 25 IVDELASKLNVTFQTSKFEAQVATAFQDGEKILLVKPATYMNDSGRAVGPLMSYYNVDPA 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV HDD+ LP G +RL+ G GGHNG+KS++++ G++ F R+++GI P +M
Sbjct: 85 DLLVIHDDLDLPLGKVRLKQKGSAGGHNGIKSIISHV-GDQHFKRVKVGIDHPQ-KMSVV 142
Query: 121 AFLLQKFNAIARERIDTA 138
++L KF + D A
Sbjct: 143 DYVLGKFTPAEVAKFDDA 160
>gi|392963302|ref|ZP_10328728.1| Peptidyl-tRNA hydrolase [Pelosinus fermentans DSM 17108]
gi|392451126|gb|EIW28120.1| Peptidyl-tRNA hydrolase [Pelosinus fermentans DSM 17108]
Length = 185
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 93/157 (59%), Gaps = 2/157 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A+ GI +A + + G+ +LL KPQTYMNLSG + G LA +YK+ +
Sbjct: 25 VVDELAQRLGIDRWRNQKEALVAE-YKGNDTILLVKPQTYMNLSGVAVGELARWYKVAVE 83
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+++ DDM LP G LRLR GG GGH G++S++ + + F R+R+GIGRPP
Sbjct: 84 DIIIIFDDMDLPTGRLRLRMKGGSGGHRGIESLLTHLSKD-SFPRVRVGIGRPPAGWQVV 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 157
++L F A + + +A+++ + + +L +G+ ++
Sbjct: 143 DYVLSSFTAEEQPLVKSAIEKAADATESILEQGMNKA 179
>gi|421056860|ref|ZP_15519777.1| peptidyl-tRNA hydrolase [Pelosinus fermentans B4]
gi|421057209|ref|ZP_15520081.1| Peptidyl-tRNA hydrolase [Pelosinus fermentans B3]
gi|421064964|ref|ZP_15526779.1| Peptidyl-tRNA hydrolase [Pelosinus fermentans A12]
gi|421069319|ref|ZP_15530491.1| Peptidyl-tRNA hydrolase [Pelosinus fermentans A11]
gi|392438040|gb|EIW15902.1| peptidyl-tRNA hydrolase [Pelosinus fermentans B4]
gi|392450339|gb|EIW27392.1| Peptidyl-tRNA hydrolase [Pelosinus fermentans A11]
gi|392459996|gb|EIW36351.1| Peptidyl-tRNA hydrolase [Pelosinus fermentans A12]
gi|392463575|gb|EIW39493.1| Peptidyl-tRNA hydrolase [Pelosinus fermentans B3]
Length = 185
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 93/157 (59%), Gaps = 2/157 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A+ GI +A + + G+ +LL KPQTYMNLSG + G LA +YK+ +
Sbjct: 25 VVDELAQRLGIDRWRNQKEALVAE-YKGNDTILLVKPQTYMNLSGVAVGELARWYKVAVE 83
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+++ DDM LP G LRLR GG GGH G++S++ + + F R+R+GIGRPP
Sbjct: 84 DIIIIFDDMDLPTGRLRLRMKGGSGGHRGIESLLTHLSKD-SFPRVRVGIGRPPAGWQVV 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 157
++L F A + + +A+++ + + +L +G+ ++
Sbjct: 143 DYVLSSFTAEEQPLVKSAIEKAADATESILEQGMNKA 179
>gi|261416826|ref|YP_003250509.1| peptidyl-tRNA hydrolase [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261373282|gb|ACX76027.1| peptidyl-tRNA hydrolase [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 184
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 78/131 (59%), Gaps = 2/131 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
LL KPQTYMNLSGE+ L +YK+ ++ +LVF DD+ L G +R R +G HGG NGL+
Sbjct: 54 CLLVKPQTYMNLSGEAVQALMTWYKVKVDHLLVFSDDINLDVGRIRCRKDGSHGGQNGLR 113
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
+++ + +F R+R G+G+ P + D ++L KF+ R + D A+ + +++
Sbjct: 114 NIIEHV--GDKFPRIRFGVGKCPPKFDLSNWVLAKFSPEDRPKFDEAIAKVPALVECYFK 171
Query: 152 KGLTESARHFN 162
G+ + +N
Sbjct: 172 LGIEKCMERYN 182
>gi|422735113|ref|ZP_16791393.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX1341]
gi|315168149|gb|EFU12166.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX1341]
Length = 188
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 87/163 (53%), Gaps = 4/163 (2%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D A Q +S N + +A + F+G VLL KP T+MN SG S GPL Y+ + +
Sbjct: 26 LDEIAYRQNVSFNNSNFEADIAEFFIGTEKVLLVKPLTFMNESGRSIGPLLTYFGVDVED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DD+ L G +RLR G GGHNG+KS++ + G F R++IGIGRP
Sbjct: 86 LIVIYDDLDLEVGKIRLRQKGSAGGHNGIKSLIAHL-GTNVFPRIKIGIGRPSKNDTVIH 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT--ESARHFN 162
+L F E + A+++ + L +G T E+ FN
Sbjct: 145 HVLSTFPKETHEEMLLAVKKAADA-ALYACEGHTFVETMNQFN 186
>gi|427718430|ref|YP_007066424.1| peptidyl-tRNA hydrolase [Calothrix sp. PCC 7507]
gi|427350866|gb|AFY33590.1| peptidyl-tRNA hydrolase [Calothrix sp. PCC 7507]
Length = 213
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 96/172 (55%), Gaps = 14/172 (8%)
Query: 2 IDAFAESQGISM-NTVHCKATFGQGFVGDAPV----LLAKPQTYMNLSGESTGPLAAYYK 56
+DA + + I + + FG+G AP+ L KP TYMN SG++ + ++YK
Sbjct: 38 VDALSRTWQIPLAENRKFQGEFGEGI---APIGGKIRLLKPSTYMNRSGQAIQAVTSWYK 94
Query: 57 LPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPG- 115
LP VL+ +DDM LP G RLR +G GGHNG+KS + + ++F RLRIGIG+P G
Sbjct: 95 LPPESVLIIYDDMDLPLGKTRLRLSGSAGGHNGMKSAIAHL-STQDFPRLRIGIGKPKGA 153
Query: 116 ----QMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
+ + +L +F++ + + LQ VE ++L L +G+ ++ N+
Sbjct: 154 GNVEESGTVSHVLGRFSSTETQLMSLVLQFVVECIELSLKQGVEKAMNRCNS 205
>gi|317120948|ref|YP_004100951.1| peptidyl-tRNA hydrolase [Thermaerobacter marianensis DSM 12885]
gi|315590928|gb|ADU50224.1| peptidyl-tRNA hydrolase [Thermaerobacter marianensis DSM 12885]
Length = 220
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 87/162 (53%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++DA A + + + +G PV L KPQTYMN SGE+ +++P
Sbjct: 26 VVDALARRLRTAGWRRGFASLWAEGSWRGQPVALLKPQTYMNASGEAVQQACRAWRVPPA 85
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
VLV +DD+ LP G LRLR G GGH G+ S++ G +F RLRIGIGRPP +D
Sbjct: 86 EVLVVYDDLDLPPGHLRLRPRGSAGGHRGVASIIAAL-GGEDFPRLRIGIGRPPAGVDAA 144
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F+ + ++ A+Q E + +L+ GL + +N
Sbjct: 145 EYVLAPFDPAEQPLMEAAVQRAAEAVLAVLATGLQLAMSRYN 186
>gi|344996980|ref|YP_004799323.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor lactoaceticus 6A]
gi|343965199|gb|AEM74346.1| Peptidyl-tRNA hydrolase [Caldicellulosiruptor lactoaceticus 6A]
Length = 189
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 86/161 (53%), Gaps = 3/161 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ ++ + K G VLL KP TYMN SG+S +YK+ +
Sbjct: 27 IDYLAQFFNTKVDKIKFKGLVGSFEYSGKKVLLLKPMTYMNASGDSIIEAVNFYKIKPEK 86
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DD+ GV+++R G GGHNG+KS++ G EF R+RIGIG P + D
Sbjct: 87 LIVIYDDIAFDVGVVKMRKKGSDGGHNGVKSIIQRL-GTEEFPRIRIGIGIP--KHDMVK 143
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L +F +E+I A+++ +K+LL + + + N
Sbjct: 144 YVLSEFEDGEKEKIFKAIEKAANGIKILLESDIDRAMNYIN 184
>gi|330993036|ref|ZP_08316974.1| Peptidyl-tRNA hydrolase [Gluconacetobacter sp. SXCC-1]
gi|329759806|gb|EGG76312.1| Peptidyl-tRNA hydrolase [Gluconacetobacter sp. SXCC-1]
Length = 190
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 78/148 (52%), Gaps = 1/148 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D A G + + +G VG VLL +P TYMNLSGES AA+YKLP
Sbjct: 26 VDRIAARHGFAPWRRRFRGEVAEGMVGRHKVLLLRPMTYMNLSGESVQQAAAFYKLPAES 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+ FHD++ L G +R++ GG GHNGL+S M+ G +E+ R+R+GIG P +
Sbjct: 86 ITAFHDELDLDPGRIRVKRGGGAAGHNGLRS-MDRMLGTKEYWRVRLGIGHPGSRERVTG 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLL 149
+L F+ E +D L + LL
Sbjct: 145 HVLGDFSRADHEWLDPMLDTLADEATLL 172
>gi|169824177|ref|YP_001691788.1| peptidyl-tRNA hydrolase [Finegoldia magna ATCC 29328]
gi|238687728|sp|B0S0D9.1|PTH_FINM2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|167830982|dbj|BAG07898.1| peptidyl-tRNA hydrolase [Finegoldia magna ATCC 29328]
Length = 189
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 91/162 (56%), Gaps = 2/162 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ I +N + K+ G+GF+GD V+L KP TYMN SG++ YY L
Sbjct: 25 VIDDLAKKLNIKVNKLKFKSLIGEGFIGDEKVILMKPSTYMNDSGKAILDCFNYYNLSAE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V DD+ +P G +R++ G G HNGLKS++ +++FAR+++ +G+ + D K
Sbjct: 85 NLIVICDDIDIPFGTIRIKKKGSAGTHNGLKSIIYLIE-SQDFARIKVSVGQND-KYDLK 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
F+L +F+ E ++ + + ++ + + + +FN
Sbjct: 143 DFVLSQFSKKEFEVLEKEIDMSSDAAIKIVEENVDYAMNNFN 184
>gi|392988401|ref|YP_006486994.1| peptidyl-tRNA hydrolase [Enterococcus hirae ATCC 9790]
gi|392335821|gb|AFM70103.1| peptidyl-tRNA hydrolase [Enterococcus hirae ATCC 9790]
Length = 186
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 86/163 (52%), Gaps = 2/163 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D AE Q +A + F +LL KPQT+MN SG + GPL Y+ +
Sbjct: 25 VVDRMAEKQQAVFKKNTFEAEVAEFFYQGEKILLVKPQTFMNESGRAVGPLMTYFGIYPE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ L G +RLR G GGHNG+KS++++ N F R+++GIGRP G
Sbjct: 85 ELVVVYDDLDLVTGKIRLRQKGSAGGHNGIKSIISHLNTNV-FDRIKVGIGRPEGNKTVV 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLS-KGLTESARHFN 162
+L F+ + I+ ++ + V L+ +L ++ FN
Sbjct: 144 QHVLSPFSKEVQPLIEASIDQSVAALEFMLDGHSFIDTMNKFN 186
>gi|295425672|ref|ZP_06818359.1| aminoacyl-tRNA hydrolase [Lactobacillus amylolyticus DSM 11664]
gi|295064688|gb|EFG55609.1| aminoacyl-tRNA hydrolase [Lactobacillus amylolyticus DSM 11664]
Length = 185
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 85/150 (56%), Gaps = 2/150 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D + E S++ + + + + V+L +PQTYMN SG S + ++K+
Sbjct: 26 LDHYLEENNFSLDKDKFEGLWTKQKINGEDVILLEPQTYMNDSGRSIAQVVNFFKIDPAD 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+LV DDM +P G +R+R NG GGHNG+KS++ + G +F RL+IGI P +M +
Sbjct: 86 ILVIQDDMDMPIGKIRIRANGKSGGHNGIKSIIRDL-GTEKFNRLKIGISHPQ-KMTVVS 143
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLS 151
++L FN ++ +D A + G E++ ++
Sbjct: 144 WVLTPFNEEQQKLMDDAFETGTEIIDDFIN 173
>gi|379710861|ref|YP_005266066.1| Peptidyl-tRNA hydrolase (PTH) [Nocardia cyriacigeorgica GUH-2]
gi|374848360|emb|CCF65432.1| Peptidyl-tRNA hydrolase (PTH) [Nocardia cyriacigeorgica GUH-2]
Length = 191
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 87/129 (67%), Gaps = 2/129 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
VL+AKP++YMNLSG LA ++ +P V+V HD++ LP G +RL+ GG GGHNGL+
Sbjct: 62 VLIAKPRSYMNLSGRPVAALARFFSVPATEVIVVHDELDLPFGAIRLKRGGGEGGHNGLR 121
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
SV +++ R RIGIGRPPG+ DP ++L+ F+A R+ + +++ + ++LLL
Sbjct: 122 SVSQAL-TTKDYLRTRIGIGRPPGRQDPADYVLKPFSAPERKEVPVLVEQAADAVELLLR 180
Query: 152 KGLTESARH 160
GL E+A++
Sbjct: 181 VGL-ETAQN 188
>gi|269217261|ref|ZP_06161115.1| aminoacyl-tRNA hydrolase [Slackia exigua ATCC 700122]
gi|402829076|ref|ZP_10877957.1| aminoacyl-tRNA hydrolase [Slackia sp. CM382]
gi|269129398|gb|EEZ60483.1| aminoacyl-tRNA hydrolase [Slackia exigua ATCC 700122]
gi|402284830|gb|EJU33323.1| aminoacyl-tRNA hydrolase [Slackia sp. CM382]
Length = 185
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A +S C A G+ ++LAKPQ+YMN SG LAA Y +
Sbjct: 25 VIDLLAGELRVSYWKSECGALTGKTAYRGEDIVLAKPQSYMNASGGPVKQLAAAYGATPD 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V HD++ + G +R++ GG GHNGLKS+ + +++AR+RIGIGRPPG+M
Sbjct: 85 DIVVIHDELDIDPGTIRVKFGGGLAGHNGLKSIAEKLQ-TKDWARVRIGIGRPPGRMPVV 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L A + A G + + L GL ++ + +N
Sbjct: 144 DWVLGTPRKEAWDDFQQAAHLGSQAVLYFLEHGLAKTQQEYN 185
>gi|220904722|ref|YP_002480034.1| Aminoacyl-tRNA hydrolase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|254783864|sp|B8J0S9.1|PTH_DESDA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|219869021|gb|ACL49356.1| Aminoacyl-tRNA hydrolase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 229
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 77/131 (58%), Gaps = 1/131 (0%)
Query: 29 DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHN 88
D L AKPQT+MNLSG+ PL +++KL ++V HD++ +P G LR + GG+ GHN
Sbjct: 63 DGCWLAAKPQTFMNLSGQCVQPLLSWHKLKAADLVVAHDELDIPPGELRFKFGGGNAGHN 122
Query: 89 GLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKL 148
GLKS+ G +F RLR+GIGRPP + D ++L + E +D L ++VL
Sbjct: 123 GLKSI-TELLGTPDFYRLRMGIGRPPHKGDVTNWVLGRPQGEDAENLDHILPLALDVLFA 181
Query: 149 LLSKGLTESAR 159
KGL + R
Sbjct: 182 FADKGLDSAVR 192
>gi|443328965|ref|ZP_21057557.1| peptidyl-tRNA hydrolase [Xenococcus sp. PCC 7305]
gi|442791510|gb|ELS01005.1| peptidyl-tRNA hydrolase [Xenococcus sp. PCC 7305]
Length = 201
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 101/179 (56%), Gaps = 15/179 (8%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGD------APVLLAKPQTYMNLSGESTGPLAAYY 55
+D+ A++ G S F QG V + + + L KP TYMN SG++ + +Y
Sbjct: 32 VDSLAKTWGFSWRE---NKRF-QGLVAEGVSPYGSKMRLLKPLTYMNRSGQAVRAVIDWY 87
Query: 56 KLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPG 115
K+ + VLV +DDM LP G LR+R +G GGHNG+KS++ + G ++F RLRIGIG+ G
Sbjct: 88 KIAPDSVLVIYDDMDLPVGRLRIRRSGSAGGHNGMKSIIAHL-GKQDFPRLRIGIGKSDG 146
Query: 116 QMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHIRLQN 174
+ +L KF ++ I+ L V+ ++ L +G+ ++ +N+ K ++++N
Sbjct: 147 KRQTIGHVLGKFAPEEQKVIEEMLDISVKAVEKSLKEGVEKAMNIYNS----KQLKIEN 201
>gi|149177253|ref|ZP_01855859.1| peptidyl-tRNA hydrolase [Planctomyces maris DSM 8797]
gi|148843967|gb|EDL58324.1| peptidyl-tRNA hydrolase [Planctomyces maris DSM 8797]
Length = 189
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 82/164 (50%), Gaps = 2/164 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++ AE G + +A + G VLL PQT+MNLSG S +A ++KLP
Sbjct: 25 VLSQLAEWHGAPGSRSQFEAEVTEISCGGDKVLLVAPQTFMNLSGRSVAAVAKFFKLPAT 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V+V DDM LP G LRLR +G GG GL+ ++ G ++ RLR+G+GRPP
Sbjct: 85 DVMVVCDDMNLPVGRLRLRGSGSAGGQKGLQDIIQKL-GTQDVPRLRVGVGRPPAGFSAA 143
Query: 121 AFLLQKFNAIAR-ERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L +F E I TA+ ++ + GL + N
Sbjct: 144 DYVLGRFQGKQEFELIATAVDNAARGIECWVQSGLEMAMNQVNA 187
>gi|209527283|ref|ZP_03275793.1| Aminoacyl-tRNA hydrolase [Arthrospira maxima CS-328]
gi|376003251|ref|ZP_09781065.1| peptidyl-tRNA hydrolase (PTH) [Arthrospira sp. PCC 8005]
gi|423066186|ref|ZP_17054976.1| Aminoacyl-tRNA hydrolase [Arthrospira platensis C1]
gi|209492271|gb|EDZ92616.1| Aminoacyl-tRNA hydrolase [Arthrospira maxima CS-328]
gi|375328411|emb|CCE16818.1| peptidyl-tRNA hydrolase (PTH) [Arthrospira sp. PCC 8005]
gi|406712228|gb|EKD07417.1| Aminoacyl-tRNA hydrolase [Arthrospira platensis C1]
Length = 201
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 95/169 (56%), Gaps = 8/169 (4%)
Query: 2 IDAFAESQGISMN-TVHCKATFGQGFVGDAPVL-LAKPQTYMNLSGESTGPLAAYYKLPL 59
+D A+ G +++ + FG+ + L L KP TYMN SG++ + +YKLP
Sbjct: 30 VDFLADKWGATLSENRRFQGVFGEAKMRSHDKLYLLKPLTYMNRSGQAIRSVVDWYKLPP 89
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQM-- 117
VLV +DDM LP G LRLR +G GGHNG+KS + + G + F RLR+GI +P +
Sbjct: 90 ESVLVIYDDMDLPVGRLRLRLSGSAGGHNGMKSAIAHL-GTQNFPRLRLGIDKPQAAVLN 148
Query: 118 ---DPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
+ + +L KF R+ +D LQ+ +E ++L L G+ ++ +N+
Sbjct: 149 HDRETISHVLGKFPPNERQTMDKLLQQVLEAIELALEDGVEKAMSLYNS 197
>gi|239637488|ref|ZP_04678462.1| peptidyl-tRNA hydrolase [Staphylococcus warneri L37603]
gi|239596933|gb|EEQ79456.1| peptidyl-tRNA hydrolase [Staphylococcus warneri L37603]
Length = 190
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 88/167 (52%), Gaps = 6/167 (3%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID E +++ K + + VLL +P T MNLSGE+ PL YY + ++
Sbjct: 25 VIDYILERHRFTLDKQKFKGAYTIERMNGDKVLLIEPMTMMNLSGEAVAPLMDYYNVDVD 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ L G +RLR G GGHNG+KS++ G +F R+RIG+GRP M
Sbjct: 85 DLIVLYDDLDLEQGQVRLRQKGSAGGHNGMKSIIKML-GTDQFKRIRIGVGRPTNGMSVP 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKY 167
++LQ+F+ ++ ++ + + E++R N + +Y
Sbjct: 144 DYVLQRFSKEEMITMEKVIEHSANAV-----ESFIETSRFDNVMNEY 185
>gi|159902816|ref|YP_001550160.1| peptidyl-tRNA hydrolase [Prochlorococcus marinus str. MIT 9211]
gi|159887992|gb|ABX08206.1| Peptidyl-tRNA hydrolase [Prochlorococcus marinus str. MIT 9211]
Length = 206
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 94/172 (54%), Gaps = 11/172 (6%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGF---VGDAPVLLAKPQTYMNLSGESTGPLAAYYKL 57
+++ A + S +T K FGQ +G L P TYMN SG + ++ L
Sbjct: 31 VLEKLATKECASFST--SKKLFGQLAEIGIGAQKRRLLMPDTYMNESGRAVKAAMHWFGL 88
Query: 58 PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRP---- 113
N +L+ DD+ LP G LRLR+ GG GGHNGLKS++NN G + F+RLR+GIG+P
Sbjct: 89 QPNHILIIVDDIDLPLGKLRLRYQGGAGGHNGLKSIINNL-GTQNFSRLRVGIGKPVIAF 147
Query: 114 -PGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTI 164
Q+ + +L FN+ + + + L E V L L+ GL ++A H N++
Sbjct: 148 EEKQVRTVSHVLGAFNSKEQLVMQSVLNEVVLGLNLIQEVGLEKAANHLNSM 199
>gi|296532496|ref|ZP_06895213.1| aminoacyl-tRNA hydrolase [Roseomonas cervicalis ATCC 49957]
gi|296267180|gb|EFH13088.1| aminoacyl-tRNA hydrolase [Roseomonas cervicalis ATCC 49957]
Length = 190
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 88/159 (55%), Gaps = 9/159 (5%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+DA A G + K +G + +LL KPQTYMNLSGES P AA++K+PL+
Sbjct: 26 LDAIARRHGFTPWRQRYKGLVAEGSIDGRKLLLLKPQTYMNLSGESVQPAAAFHKIPLSD 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+ FHD++ L G +R++ GG GHNGL+ M+ G ++ R+R+GIG P +
Sbjct: 86 ITAFHDELDLAPGKIRVKKGGGAAGHNGLRD-MDRRLGAPDYWRVRLGIGHPGSKEKVTG 144
Query: 122 FLLQKFNAIARERIDTALQ---EGVEVLKLLLSKGLTES 157
+L F ++DT L+ + V LL++G TE+
Sbjct: 145 HVLGNF-----AKVDTWLEPMLDAVAEAAPLLARGETEA 178
>gi|67925084|ref|ZP_00518461.1| Peptidyl-tRNA hydrolase [Crocosphaera watsonii WH 8501]
gi|67853058|gb|EAM48440.1| Peptidyl-tRNA hydrolase [Crocosphaera watsonii WH 8501]
Length = 204
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 91/165 (55%), Gaps = 3/165 (1%)
Query: 1 MIDAFAESQGISM-NTVHCKATFGQGFV-GDAPVLLAKPQTYMNLSGESTGPLAAYYKLP 58
++D AE+ +S T + +G + L KP TYMN SG+S + +YKL
Sbjct: 36 IVDILAETWQLSWKETRRFQGMIAEGNSRNQQKIYLLKPSTYMNRSGQSVRAVTDWYKLK 95
Query: 59 LNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMD 118
VLV +DDM LP G LR+R +G GGHNG+KS++++ G + F RLRIGIG+ +
Sbjct: 96 SENVLVIYDDMDLPIGRLRMRLSGSAGGHNGMKSIISHL-GGQNFPRLRIGIGKSNQVDN 154
Query: 119 PKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
+L +F+ R+ ID V+ ++ L +G+ ++ FN+
Sbjct: 155 TIPHVLGRFSPEERKIIDKTYPLVVDAIETTLKEGVEKAMSQFNS 199
>gi|345851996|ref|ZP_08804953.1| peptidyl-tRNA hydrolase [Streptomyces zinciresistens K42]
gi|345636548|gb|EGX58098.1| peptidyl-tRNA hydrolase [Streptomyces zinciresistens K42]
Length = 200
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 78/132 (59%), Gaps = 2/132 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+L KP YMNLSG L +YK+PL V+ HD++ + G LRL+ GG GHNGLK
Sbjct: 71 VVLVKPMAYMNLSGGPLNALRDFYKVPLEHVVAVHDELDIEYGTLRLKLGGGDNGHNGLK 130
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S M G ++ R+R GIGRPPG+M F+L+ F+ R+ +D + + ++ L+
Sbjct: 131 S-MTKVMGA-DYHRVRFGIGRPPGRMQVADFVLRDFSVAERKELDYFVDRAADGVESLVI 188
Query: 152 KGLTESARHFNT 163
+GL + +N+
Sbjct: 189 EGLERAQSTYNS 200
>gi|313888220|ref|ZP_07821894.1| aminoacyl-tRNA hydrolase [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845910|gb|EFR33297.1| aminoacyl-tRNA hydrolase [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 189
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 90/162 (55%), Gaps = 1/162 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A+ I +N + K G+G +G+ V+L KP T+MN SGES + +YKL
Sbjct: 26 IDVLADKLNIKVNKIKFKGLVGEGRIGNEKVILLKPHTFMNNSGESIVEILNFYKLKPED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V DD+ + L+++ NG G HNGLKS++ N G+++FAR +IG+G+ D +
Sbjct: 86 LMVIVDDIDIEFAQLKIKKNGSAGTHNGLKSIV-NLTGSKDFARFKIGVGKKHPNEDLAS 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
F+L F + R+ I A+ + + + G+ +S +N
Sbjct: 145 FVLSNFPSKDRKHIADAIDACADAVIDAVDSGIDKSMNSYNN 186
>gi|427706338|ref|YP_007048715.1| peptidyl-tRNA hydrolase [Nostoc sp. PCC 7107]
gi|427358843|gb|AFY41565.1| peptidyl-tRNA hydrolase [Nostoc sp. PCC 7107]
Length = 212
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 96/170 (56%), Gaps = 10/170 (5%)
Query: 2 IDAFAESQGISMN-TVHCKATFGQG--FVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLP 58
+DA A + IS+ + +G+G F G+ + L KP TYMN SG++ + ++YKLP
Sbjct: 38 VDALARAWQISVTENRKFQGEYGEGMAFAGNK-IRLLKPLTYMNRSGQAIQSVTSWYKLP 96
Query: 59 LNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPP---- 114
VL+ +DDM LP G RLR +G GGHNG+KS + + + F RLRIGIG+P
Sbjct: 97 PESVLIIYDDMDLPLGKTRLRLSGSAGGHNGMKSAIAHLN-TQNFPRLRIGIGKPKDAAN 155
Query: 115 -GQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
+ + +L KF+A + + LQ V+ +++ L +G+ ++ N+
Sbjct: 156 GDNSETVSHVLGKFSATETQLMSAVLQFVVDCVEMSLKQGVEKAMNRCNS 205
>gi|411119817|ref|ZP_11392193.1| peptidyl-tRNA hydrolase [Oscillatoriales cyanobacterium JSC-12]
gi|410709973|gb|EKQ67484.1| peptidyl-tRNA hydrolase [Oscillatoriales cyanobacterium JSC-12]
Length = 216
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 93/168 (55%), Gaps = 6/168 (3%)
Query: 1 MIDAFAESQGISMNTVH-CKATFGQGFV-GDAPVLLAKPQTYMNLSGESTGPLAAYYKLP 58
++D A+ IS++ FG+G G + L KPQT+MN SG++ + +YKLP
Sbjct: 42 VVDLLAQYWHISLSEQKKFHGIFGEGIAPGAQKIRLLKPQTFMNNSGQAMRAVVDWYKLP 101
Query: 59 LNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRP---PG 115
VLV +DDM LP G LR+R +G GGHNG+KS + + G + F RLRIGIG G
Sbjct: 102 PESVLVIYDDMDLPIGKLRMRLSGSAGGHNGMKSAIAHL-GTQHFPRLRIGIGSAKAEKG 160
Query: 116 QMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
D + +L KF + + +Q + ++ L++G+ ++ +N+
Sbjct: 161 DKDTISHVLGKFAPMEAAMMTEVVQLAADAIECSLTQGIAKAMSLYNS 208
>gi|420146319|ref|ZP_14653745.1| Peptidyl-tRNA hydrolase (PTH) [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
gi|398401981|gb|EJN55386.1| Peptidyl-tRNA hydrolase (PTH) [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
Length = 188
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 83/146 (56%), Gaps = 2/146 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID A + ++ + +A + F D V L KPQT+MN SG + PL YY++ L
Sbjct: 26 IDRMAAAHQVTFSHNQFEANYATYFENDEKVYLVKPQTFMNDSGRAVKPLMTYYQIQLAE 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DDM L G LRLR +G GGHNG+KS++ +F +F R+RIG G P +
Sbjct: 86 LMVVYDDMDLVPGRLRLREHGSAGGHNGIKSLI-SFLQTSDFNRVRIGTGHPE-RRSVVD 143
Query: 122 FLLQKFNAIARERIDTALQEGVEVLK 147
++L F+ A+ +D ++ +E L+
Sbjct: 144 WVLSPFSDEAQPLVDRSIDTAIEALE 169
>gi|365137730|ref|ZP_09344442.1| peptidyl-tRNA hydrolase [Klebsiella sp. 4_1_44FAA]
gi|363655843|gb|EHL94639.1| peptidyl-tRNA hydrolase [Klebsiella sp. 4_1_44FAA]
Length = 194
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 77/134 (57%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V L P T+MNLSG++ +A +Y++ + +LV HD++ LP GV + + G HGGHNGLK
Sbjct: 59 VRLLVPTTFMNLSGKAVAAMATFYRINPDEILVAHDELDLPPGVAKFKLGGSHGGHNGLK 118
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
+++ N F RLR+GIG P + F+L K A ++ ID A+ E ++ L
Sbjct: 119 DIISKLGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPASEQKLIDDAVDEAARCTEIWLK 178
Query: 152 KGLTESARHFNTIQ 165
GLT++ + +
Sbjct: 179 DGLTKATNRLHAFK 192
>gi|308379937|ref|ZP_07488154.2| putative aminoacyl-tRNA hydrolase [Mycobacterium tuberculosis
SUMu011]
gi|308363124|gb|EFP51975.1| putative aminoacyl-tRNA hydrolase [Mycobacterium tuberculosis
SUMu011]
Length = 130
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 79/121 (65%), Gaps = 1/121 (0%)
Query: 34 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 93
+AKP+ YMN SG GPLA +Y + ++V HDD+ L G +RL+ GG GGHNGL+SV
Sbjct: 1 MAKPRCYMNESGRQIGPLAKFYSVAPANIIVIHDDLDLEFGRIRLKIGGGEGGHNGLRSV 60
Query: 94 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 153
+ G ++F R+RIGIGRPPG+ DP AF+L+ F R + T ++ + +LL+ +G
Sbjct: 61 VAAL-GTKDFQRVRIGIGRPPGRKDPAAFVLENFTPAERAEVPTICEQAADATELLIEQG 119
Query: 154 L 154
+
Sbjct: 120 M 120
>gi|422008525|ref|ZP_16355509.1| peptidyl-tRNA hydrolase [Providencia rettgeri Dmel1]
gi|414094998|gb|EKT56661.1| peptidyl-tRNA hydrolase [Providencia rettgeri Dmel1]
Length = 196
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 78/131 (59%)
Query: 27 VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGG 86
+G + L P T+MNLSG+S +A +Y++ L+ +LV HD++ LP GV +++ G +GG
Sbjct: 55 MGGNDIRLLVPTTFMNLSGKSVAAIANFYRINLDEILVAHDELDLPPGVAKMKLGGSNGG 114
Query: 87 HNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 146
HNGLK + + F N F RLRIGIG P + F+L K ++ ID A+ E
Sbjct: 115 HNGLKDIQSKFANNPNFYRLRIGIGHPGDKNKVVGFVLGKPPLSEQKLIDDAIDEAARCT 174
Query: 147 KLLLSKGLTES 157
+LL+ G+ ++
Sbjct: 175 DILLADGMDKA 185
>gi|354568542|ref|ZP_08987706.1| Peptidyl-tRNA hydrolase [Fischerella sp. JSC-11]
gi|353540265|gb|EHC09742.1| Peptidyl-tRNA hydrolase [Fischerella sp. JSC-11]
Length = 216
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 84/147 (57%), Gaps = 6/147 (4%)
Query: 22 FGQGFV-GDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRH 80
+G+G + + L KP TYMN SG++ + +YKLP VLV +DDM LP G RLR
Sbjct: 59 YGEGIAPTNDKIRLLKPLTYMNRSGQAIQAVTNWYKLPPESVLVIYDDMDLPLGKTRLRL 118
Query: 81 NGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQM----DPKAFLLQKFNAIARERID 136
+G GGHNG+KS + + G + F RLRIGIGRP G + +++L KF+ + +
Sbjct: 119 SGSAGGHNGMKSAIAHL-GTQNFPRLRIGIGRPKGATNGDENTVSYVLGKFSTTETKFVS 177
Query: 137 TALQEGVEVLKLLLSKGLTESARHFNT 163
L E ++L L +G+ ++ N+
Sbjct: 178 EVLNFVCECVELCLKQGVEKAMNRCNS 204
>gi|395238730|ref|ZP_10416639.1| Peptidyl-tRNA hydrolase [Lactobacillus gigeriorum CRBIP 24.85]
gi|394477251|emb|CCI86616.1| Peptidyl-tRNA hydrolase [Lactobacillus gigeriorum CRBIP 24.85]
Length = 185
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
ID + +G+S++ + + + V ++L +PQT+MN SG S +A ++K+
Sbjct: 26 IDTYLAKKGLSLDKDKFEGLWTKVKVAGEDIILLEPQTFMNESGRSIAQVANFFKVEPQD 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
VLV HDDM +P G +R+R NG GGHNG+KS++ + G +F RL+IGI R P + +
Sbjct: 86 VLVIHDDMDMPIGKIRIRANGKSGGHNGIKSIIRDL-GTEKFNRLKIGI-RHPEKTSVVS 143
Query: 122 FLLQKFNAIARERIDTALQEGVEVL 146
++L F + +D A E++
Sbjct: 144 WVLSPFTTEQQALMDEAFATSCEII 168
>gi|425461201|ref|ZP_18840681.1| Peptidyl-tRNA hydrolase [Microcystis aeruginosa PCC 9808]
gi|389826004|emb|CCI23853.1| Peptidyl-tRNA hydrolase [Microcystis aeruginosa PCC 9808]
Length = 208
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 94/167 (56%), Gaps = 12/167 (7%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFV--GDAPVL----LAKPQTYMNLSGESTGPLAAYY 55
+D+ A G+S F QGF+ GD+P+L L KPQTYMN SG+S + +Y
Sbjct: 37 VDSLARDWGLSWQE---NKRF-QGFIAEGDSPLLGKIRLLKPQTYMNRSGQSVRAVLDWY 92
Query: 56 KLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPG 115
KL +LV +DDM LP G LR+R +G GGHNG+KS++ + G FARLRIGIG+
Sbjct: 93 KLAPESILVIYDDMDLPLGRLRIRLSGSAGGHNGIKSMIAHV-GTENFARLRIGIGKST- 150
Query: 116 QMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+ + +L +F E I L + ++L L +GL ++ +N
Sbjct: 151 EKATISHVLGRFTPQENEVILKVLDLSRKAIELGLKQGLQKAMSLYN 197
>gi|345000160|ref|YP_004803014.1| peptidyl-tRNA hydrolase [Streptomyces sp. SirexAA-E]
gi|344315786|gb|AEN10474.1| peptidyl-tRNA hydrolase [Streptomyces sp. SirexAA-E]
Length = 197
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 79/132 (59%), Gaps = 2/132 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+L KP +YMNLSG L +YK+P + V+ HD++ + G LRL+ GG GHNGLK
Sbjct: 68 VVLVKPMSYMNLSGGPVTALRDFYKVPTDHVVAVHDELDIDYGTLRLKLGGGDNGHNGLK 127
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ ++ R+R GIGRPPG+M F+L+ F++ R+ + + + ++ L++
Sbjct: 128 SMTKAM--GPDYHRVRFGIGRPPGRMQVADFVLKDFSSGERKELGYLVDRAADAVEALVA 185
Query: 152 KGLTESARHFNT 163
+GL + +N+
Sbjct: 186 EGLERAQSAYNS 197
>gi|414075566|ref|YP_006994884.1| peptidyl-tRNA hydrolase [Anabaena sp. 90]
gi|413968982|gb|AFW93071.1| peptidyl-tRNA hydrolase [Anabaena sp. 90]
Length = 213
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 91/163 (55%), Gaps = 8/163 (4%)
Query: 2 IDAFAESQGISM-NTVHCKATFGQG-FVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPL 59
ID A + IS+ + FG+G G + L KP TYMNLSG++ + +YK+P
Sbjct: 39 IDTLARAWQISLAENRKFQGEFGEGNAAGKGKIRLLKPLTYMNLSGQAIQAVTNWYKIPP 98
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
+L+ +DD+ LP G RLR +G GGHNG+KS++++ + F RLRIGIG+P +D
Sbjct: 99 ESILIIYDDLDLPLGKTRLRLSGSAGGHNGMKSIISHLN-TQNFPRLRIGIGKPKNAIDG 157
Query: 120 K-----AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 157
+ +L +F+A + + L VE ++ +G+ +S
Sbjct: 158 DNSHTVSHVLGRFSATENKVMSQVLNFVVECVEFSFKQGIEKS 200
>gi|422698802|ref|ZP_16756687.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX1346]
gi|315172644|gb|EFU16661.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX1346]
Length = 188
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 86/163 (52%), Gaps = 4/163 (2%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D A Q IS N + +A + F+G VLL KP T+MN SG S GPL Y+ +
Sbjct: 26 LDEIAYRQNISFNNSNFEADIAEFFIGTEKVLLVKPLTFMNESGRSVGPLLTYFGVDEED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DD+ L G +RLR G GGHNG+KS++ + G F R++IGIGRP
Sbjct: 86 LIVIYDDLDLEVGKIRLRQKGSAGGHNGIKSLIAHL-GTNVFPRIKIGIGRPSKNDTVIH 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT--ESARHFN 162
+L F E + A+++ + L +G T E+ FN
Sbjct: 145 HVLSTFPKETHEEMLLAVKKAADA-ALYACEGHTFVETMNQFN 186
>gi|375097142|ref|ZP_09743407.1| peptidyl-tRNA hydrolase [Saccharomonospora marina XMU15]
gi|374657875|gb|EHR52708.1| peptidyl-tRNA hydrolase [Saccharomonospora marina XMU15]
Length = 199
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 95/163 (58%), Gaps = 1/163 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D A G A QG + +LAKP+++MN+SG A ++K+P +
Sbjct: 37 VLDELAARVGGKFKAHKSGAEVVQGLLAGRKAVLAKPRSFMNVSGGPVAGAARFFKVPAD 96
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V HD++ LP G +RL+ GG GGHNGL+S+ + G +F R+R GIGRPPG+MDP
Sbjct: 97 GIVVVHDELDLPYGSVRLKFGGGAGGHNGLRSIAKSL-GTGDFYRVRFGIGRPPGRMDPA 155
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
F+L+ F+A R+ + + + + LL +GLT + F+T
Sbjct: 156 DFVLKDFSATERKELALNIDLCADAVTELLGRGLTAAQNTFHT 198
>gi|347755343|ref|YP_004862907.1| peptidyl-tRNA hydrolase [Candidatus Chloracidobacterium
thermophilum B]
gi|347587861|gb|AEP12391.1| peptidyl-tRNA hydrolase [Candidatus Chloracidobacterium
thermophilum B]
Length = 187
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 88/166 (53%), Gaps = 6/166 (3%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PL 59
++DA AE G + C+A G+ +G VLLAKPQT+MN SG++ L A Y P
Sbjct: 25 VVDALAERAGRPIKLAECEALTGRITLGTEVVLLAKPQTFMNASGQAVALLCAKYDCNPQ 84
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIG--RPPGQM 117
+ +L DD+ LP G LRLR G GGHNGLKS+ + +ARLR+GIG P G +
Sbjct: 85 HDLLAVVDDVALPFGRLRLRAKGSAGGHNGLKSLNAKLK-TEHYARLRVGIGPAHPVGNL 143
Query: 118 DPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
F+L +F+A + + + ++ + G+ + FN
Sbjct: 144 AD--FVLSRFSAAEQSELPALTARAADAVEAWVCHGIELAMARFNA 187
>gi|441514194|ref|ZP_20996015.1| peptidyl-tRNA hydrolase [Gordonia amicalis NBRC 100051]
gi|441450959|dbj|GAC53976.1| peptidyl-tRNA hydrolase [Gordonia amicalis NBRC 100051]
Length = 189
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 102/167 (61%), Gaps = 7/167 (4%)
Query: 3 DAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
DA +S G VH K A + +G VL+AK + YMN SG GPLA +Y +
Sbjct: 28 DALVDSAGERWK-VHKKSGAEVAEVRLGGQSVLVAKSRVYMNESGRQIGPLAKFYSVTPA 86
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V HD++ + G +RL+ GG GGHNGL+S+ + G R++ R+R+GIGRPPG+ DP
Sbjct: 87 DLIVVHDELDIDFGAVRLKRGGGEGGHNGLRSI-SQVMGTRDYLRVRMGIGRPPGRQDPA 145
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKY 167
F+L+ F + R ++ ++ G + ++LL+S+ L ESA+ NT+ +
Sbjct: 146 DFVLKPFPSADRAEVELMIRNGCDAVELLVSQDL-ESAQ--NTVHAW 189
>gi|253990020|ref|YP_003041376.1| peptidyl-tRNA hydrolase [Photorhabdus asymbiotica]
gi|253781470|emb|CAQ84633.1| peptidyl-tRNA hydrolase [Photorhabdus asymbiotica]
Length = 196
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 75/126 (59%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V L P T+MNLSG+S LA++Y++ + +LV HD++ LP GV +++ G HGGHNGLK
Sbjct: 60 VRLLVPTTFMNLSGKSVAALASFYRIQPDEILVAHDELDLPPGVAKMKLGGSHGGHNGLK 119
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
+ N F N F RLRIGIG P + F+L ++ ID A+ E + +L+
Sbjct: 120 DIQNKFGNNPNFYRLRIGIGHPGDKNKVVGFVLGTPPTNEKKLIDDAIDEALRCTDILIK 179
Query: 152 KGLTES 157
+ + ++
Sbjct: 180 QDMDKA 185
>gi|225848301|ref|YP_002728464.1| peptidyl-tRNA hydrolase [Sulfurihydrogenibium azorense Az-Fu1]
gi|225643316|gb|ACN98366.1| peptidyl-tRNA hydrolase [Sulfurihydrogenibium azorense Az-Fu1]
Length = 189
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 74/129 (57%), Gaps = 1/129 (0%)
Query: 29 DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHN 88
D V++AKPQTYMNLSG + L Y L + +LV HDD+ L G +RLR G GGHN
Sbjct: 53 DYDVIIAKPQTYMNLSGNAVLNLLEDYNLKPSEILVVHDDLDLNLGTIRLRTKGSSGGHN 112
Query: 89 GLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKL 148
GLKS++ + EF RL+IGIGRP + + ++L F + +D + E +
Sbjct: 113 GLKSIIGMIK-TEEFPRLKIGIGRPARKEEVSDYVLSPFTKEEKFVLDKVIAASTECILN 171
Query: 149 LLSKGLTES 157
+L G+ +S
Sbjct: 172 VLKYGIEKS 180
>gi|58336611|ref|YP_193196.1| peptidyl-tRNA hydrolase [Lactobacillus acidophilus NCFM]
gi|227903168|ref|ZP_04020973.1| peptidyl-tRNA hydrolase [Lactobacillus acidophilus ATCC 4796]
gi|68052870|sp|Q5FMA9.1|PTH_LACAC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|58253928|gb|AAV42165.1| peptidyl-tRNA hydrolase [Lactobacillus acidophilus NCFM]
gi|227868973|gb|EEJ76394.1| peptidyl-tRNA hydrolase [Lactobacillus acidophilus ATCC 4796]
Length = 185
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 86/150 (57%), Gaps = 2/150 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D + + +G+++N + + + + V+ +PQTYMN SG S +A ++K+
Sbjct: 26 MDHYLDKKGLTLNKDKFEGHWTKEKINGEDVIFLEPQTYMNESGRSVSQIANFFKVAPED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
VL+ DDM +P G +R+R NG GGHNG+KS++ + G +F RL+IGI R P +
Sbjct: 86 VLIIQDDMDMPIGKIRIRANGKSGGHNGIKSIIRDL-GTEKFNRLKIGI-RHPKNATVVS 143
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLS 151
++L FN ++ +D A V+++ ++
Sbjct: 144 WVLTPFNDEQQKLMDDAFDTSVDIIDDFIA 173
>gi|335047037|ref|ZP_08540058.1| aminoacyl-tRNA hydrolase [Parvimonas sp. oral taxon 110 str. F0139]
gi|333760845|gb|EGL38400.1| aminoacyl-tRNA hydrolase [Parvimonas sp. oral taxon 110 str. F0139]
Length = 195
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 88/162 (54%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ I+M K+ +GQ + + KP TYMNLSGE+ Y+K+
Sbjct: 29 VIDILADKYSINMKKEKFKSFYGQINMFRKKCVFLKPLTYMNLSGEAVIDAVNYFKIKPE 88
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V DD+ +P G +R++ G G HNGL+S++ + +F R+RI +G+ P MD K
Sbjct: 89 NIIVVLDDIDIPFGTVRIKKKGSAGTHNGLRSIIYHLE-TEDFPRVRISVGKCPDYMDLK 147
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
F+L KF++ + + L+ + ++ ++ + ++ +N
Sbjct: 148 DFVLSKFSSTEEKILKKELEIAADAVEEIIKSDVDKTMCKYN 189
>gi|409992238|ref|ZP_11275440.1| peptidyl-tRNA hydrolase [Arthrospira platensis str. Paraca]
gi|291569168|dbj|BAI91440.1| peptidyl-tRNA hydrolase [Arthrospira platensis NIES-39]
gi|409936902|gb|EKN78364.1| peptidyl-tRNA hydrolase [Arthrospira platensis str. Paraca]
Length = 201
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 87/151 (57%), Gaps = 12/151 (7%)
Query: 24 QGFVGDAP------VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLR 77
QG G+A + L KP TYMN SG++ + +YKLP VLV +DDM LP G LR
Sbjct: 48 QGVFGEAKMRSHNKLYLLKPLTYMNRSGQAIRSVVDWYKLPPESVLVIYDDMDLPVGRLR 107
Query: 78 LRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGR--PPGQMDPK---AFLLQKFNAIAR 132
LR +G GGHNG+KS + + G + F RLR+GI + PP + + +L KF R
Sbjct: 108 LRLSGSAGGHNGMKSAIAHL-GTQNFPRLRLGIDKPQPPASSSDRETISHVLGKFPPNER 166
Query: 133 ERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
+ +D LQ+ +E ++L L G+ ++ +N+
Sbjct: 167 QTMDKLLQQVLEAIELALEDGVEKAMSLYNS 197
>gi|428775477|ref|YP_007167264.1| peptidyl-tRNA hydrolase [Halothece sp. PCC 7418]
gi|428689756|gb|AFZ43050.1| peptidyl-tRNA hydrolase [Halothece sp. PCC 7418]
Length = 193
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 78/130 (60%), Gaps = 1/130 (0%)
Query: 34 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 93
L KP TYMN SG++ + +YK VL+ +DD+ LP G LRLR +G GGHNG+KS+
Sbjct: 63 LLKPNTYMNHSGQAVRAVCDWYKFSPESVLIIYDDLDLPVGRLRLRLSGSAGGHNGMKSI 122
Query: 94 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 153
+++ G +F RLRIGI + G D +L KF+ + ID AL+ EV++ L+ G
Sbjct: 123 ISHL-GTDKFPRLRIGIKKTDGAKDTIGHVLGKFSPEEQPYIDEALKVAPEVVEKALTDG 181
Query: 154 LTESARHFNT 163
L ++ +N
Sbjct: 182 LEKAMSLYNA 191
>gi|222054665|ref|YP_002537027.1| peptidyl-tRNA hydrolase [Geobacter daltonii FRC-32]
gi|254783870|sp|B9M5U5.1|PTH_GEOSF RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|221563954|gb|ACM19926.1| Aminoacyl-tRNA hydrolase [Geobacter daltonii FRC-32]
Length = 191
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 92/163 (56%), Gaps = 2/163 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D + GI+++ G+G ++L KPQT+MNLSG S ++KLP+
Sbjct: 27 VLDRLSHLAGIAISKKTFSGVCGEGNWQGERLILLKPQTFMNLSGRSAAEAIRFHKLPIE 86
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V HDD+ +P G ++L+ GGH GHNGL+S+ G+ +F R+R+GIGRP D
Sbjct: 87 DLIVIHDDLDIPFGRVKLKQGGGHAGHNGLRSLAQEL-GSGDFVRVRVGIGRPV-HGDVV 144
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
++L F+ + L V+++++L +GL ++ +N
Sbjct: 145 NYVLNNFSPEEMASLPRLLDGVVDLVEMLAREGLPKTMSLYNN 187
>gi|85859732|ref|YP_461934.1| peptidyl-tRNA hydrolase [Syntrophus aciditrophicus SB]
gi|119391023|sp|Q2LUK5.1|PTH_SYNAS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|85722823|gb|ABC77766.1| peptidyl-tRNA hydrolase [Syntrophus aciditrophicus SB]
Length = 196
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 83/128 (64%), Gaps = 1/128 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D AE Q I M+ A +G+G + VLLAKPQT+MNLSG+S LA ++K+ +
Sbjct: 25 VLDQLAEDQDIMMSQTGFDALWGKGVIAGQSVLLAKPQTFMNLSGKSVRKLADFFKIVVE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
VLV HDD+ LP GV+RL+ GG GGH GL S+ ++ G EF R+R+GIG+P + +
Sbjct: 85 DVLVVHDDLDLPFGVIRLKAGGGQGGHKGLISICDSL-GGPEFQRVRLGIGKPAQRSAVE 143
Query: 121 AFLLQKFN 128
++L+ F
Sbjct: 144 RYVLEPFT 151
>gi|90962333|ref|YP_536249.1| peptidyl-tRNA hydrolase [Lactobacillus salivarius UCC118]
gi|119390953|sp|Q1WSG3.1|PTH_LACS1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|90821527|gb|ABE00166.1| Peptidyl-tRNA hydrolase [Lactobacillus salivarius UCC118]
Length = 185
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 86/167 (51%), Gaps = 7/167 (4%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+++ F E G + N + + F+ +++ KP TYMN SG + PL Y+ L
Sbjct: 25 VVERFVEEHGGNFNKEKFDSLISELFINGEKIIVIKPTTYMNESGRAVRPLMDYFNLTTE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+++ HDDM L G LRLR G GGHNG+KS++++ G +F R+R+GI P +M
Sbjct: 85 DIIICHDDMDLEIGHLRLRQKGSAGGHNGIKSIISHV-GTEKFKRVRVGIDHPQ-KMSVV 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKY 167
++L +F ++D L V L + E+ NT+ ++
Sbjct: 143 DWVLSRFTKEQEAKLDDGLTRAVAALDDWI-----ENDDFMNTMNRF 184
>gi|417809763|ref|ZP_12456444.1| peptidyl-tRNA hydrolase [Lactobacillus salivarius GJ-24]
gi|335350687|gb|EGM52183.1| peptidyl-tRNA hydrolase [Lactobacillus salivarius GJ-24]
Length = 200
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 7/167 (4%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+++ F E G + N + + F+ +++ KP TYMN SG + PL Y+ L
Sbjct: 40 VVERFVEEHGGNFNKEKFDSLISELFINGEKIIVIKPTTYMNESGRAVRPLMDYFNLTTE 99
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+++ HDDM L G LRLR G GGHNG+KS++++ G +F R+R+GI P +M
Sbjct: 100 DIIICHDDMDLEIGHLRLRQKGSAGGHNGIKSIISHV-GTEKFKRVRVGIDHPQ-KMSVV 157
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKY 167
++L +F ++D L V L E+ NT+ ++
Sbjct: 158 DWVLSRFTKEQEAKLDDGLTRAVAAL-----DDWIENDDFMNTMNRF 199
>gi|317507884|ref|ZP_07965582.1| peptidyl-tRNA hydrolase [Segniliparus rugosus ATCC BAA-974]
gi|316253813|gb|EFV13185.1| peptidyl-tRNA hydrolase [Segniliparus rugosus ATCC BAA-974]
Length = 181
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 76/123 (61%), Gaps = 1/123 (0%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+L KP YMN+ G LA Y+ +P V+ HD++ + G++RL+ GG GHNGL+
Sbjct: 51 VILGKPTAYMNVCGPQIAKLARYFSVPPTDVVAVHDELDIGFGLVRLKRGGGEAGHNGLR 110
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ ++ G +++AR+R+G+GRPP M+ F+L F A+ R + ++ + ++ L+
Sbjct: 111 SLSSSL-GTKDYARIRVGVGRPPVGMETADFVLAGFTAVERRELPDLVERSADAVEWLVR 169
Query: 152 KGL 154
+G+
Sbjct: 170 EGV 172
>gi|315037510|ref|YP_004031078.1| peptidyl-tRNA hydrolase [Lactobacillus amylovorus GRL 1112]
gi|325955974|ref|YP_004286584.1| peptidyl-tRNA hydrolase [Lactobacillus acidophilus 30SC]
gi|385816868|ref|YP_005853258.1| peptidyl-tRNA hydrolase [Lactobacillus amylovorus GRL1118]
gi|312275643|gb|ADQ58283.1| peptidyl-tRNA hydrolase [Lactobacillus amylovorus GRL 1112]
gi|325332539|gb|ADZ06447.1| peptidyl-tRNA hydrolase [Lactobacillus acidophilus 30SC]
gi|327182806|gb|AEA31253.1| peptidyl-tRNA hydrolase [Lactobacillus amylovorus GRL1118]
Length = 185
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 87/150 (58%), Gaps = 2/150 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D + + +G+S++ + + + + V+L +PQTYMN SG S +A ++K+
Sbjct: 26 MDHYLDEKGLSLDKDKFEGLWTKQKINGEDVILLEPQTYMNESGRSVSQVANFFKVDPED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+L+ DDM +P G +R+R NG GGHNG+KS++ + G +F RL+IGI R P +
Sbjct: 86 ILIIQDDMDMPIGKIRIRANGKSGGHNGIKSIIRDL-GTEKFNRLKIGI-RHPKNATVVS 143
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLS 151
++L FN ++ +D A V+++ ++
Sbjct: 144 WVLTPFNDEQQKLMDDAFDTSVKIIDDFIA 173
>gi|260102335|ref|ZP_05752572.1| aminoacyl-tRNA hydrolase [Lactobacillus helveticus DSM 20075]
gi|417013575|ref|ZP_11946660.1| peptidyl-tRNA hydrolase [Lactobacillus helveticus MTCC 5463]
gi|260083844|gb|EEW67964.1| aminoacyl-tRNA hydrolase [Lactobacillus helveticus DSM 20075]
gi|328463459|gb|EGF35110.1| peptidyl-tRNA hydrolase [Lactobacillus helveticus MTCC 5463]
Length = 185
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 86/150 (57%), Gaps = 2/150 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D + +G+S++ + + + + V+L +PQTYMN SG S +A ++K+
Sbjct: 26 MDHYLNEKGLSLDKDKFEGHWTKQKINGEDVILLEPQTYMNESGRSVSQIANFFKVAPED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
VL+ DDM +P G +R+R NG GGHNG+KS++ + G +F RL+IGI R P +
Sbjct: 86 VLIIQDDMDMPIGKIRIRANGKSGGHNGIKSIIRDL-GTEKFNRLKIGI-RHPKNTTVVS 143
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLS 151
++L FN ++ +D A V+++ ++
Sbjct: 144 WVLTPFNDEQQKLMDDAFDTSVKIIDDFIT 173
>gi|385840862|ref|YP_005864186.1| Peptidyl-tRNA hydrolase (PTH) [Lactobacillus salivarius CECT 5713]
gi|300214983|gb|ADJ79399.1| Peptidyl-tRNA hydrolase (PTH) [Lactobacillus salivarius CECT 5713]
Length = 185
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 86/167 (51%), Gaps = 7/167 (4%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+++ F E G + N + + F+ +++ KP TYMN SG + PL Y+ L
Sbjct: 25 VVERFVEEHGGNFNKEKFDSLIAELFINGEKIIVIKPTTYMNESGRAVRPLMDYFNLTTE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+++ HDDM L G LRLR G GGHNG+KS++++ G +F R+R+GI P +M
Sbjct: 85 DIIICHDDMDLEIGHLRLRQKGSAGGHNGIKSIISHV-GTEKFKRVRVGIDHPQ-KMSVV 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKY 167
++L +F ++D L V L + E+ NT+ ++
Sbjct: 143 DWVLSRFTKEQEAKLDDGLTRAVAALDDWI-----ENDDFMNTMNRF 184
>gi|406658908|ref|ZP_11067048.1| aminoacyl-tRNA hydrolase [Streptococcus iniae 9117]
gi|405579123|gb|EKB53237.1| aminoacyl-tRNA hydrolase [Streptococcus iniae 9117]
Length = 189
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 7/167 (4%)
Query: 2 IDAFAESQGISMNTV-HCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
ID A+ GI+ + KA G F+ + L KP T+MN SG S L YY + +N
Sbjct: 27 IDQMAKKHGINFTEEKNFKALIGSTFINHEKIYLVKPITFMNNSGISVKALLTYYNISVN 86
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+++ +DD+ + G +R R G GGHNG+KS++ + G +EF R++IGIGRP M
Sbjct: 87 DMIIIYDDLDMEVGKIRFRQKGSAGGHNGIKSIIAHI-GTQEFDRIKIGIGRPKQGMTVI 145
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKY 167
+L KF++ I L++ + + L + E T+QKY
Sbjct: 146 NHVLGKFDSDDSITIALTLEKVSDAVAFYLQENNFEK-----TMQKY 187
>gi|315650058|ref|ZP_07903137.1| aminoacyl-tRNA hydrolase [Lachnoanaerobaculum saburreum DSM 3986]
gi|315487687|gb|EFU77991.1| aminoacyl-tRNA hydrolase [Lachnoanaerobaculum saburreum DSM 3986]
Length = 211
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 90/163 (55%), Gaps = 1/163 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+++ A G ++ K F + +G+ ++ +P TYMN SGES Y+K+ +
Sbjct: 46 VVEKLAYELGEDISERKYKGVFTRVRIGNEKAIILEPLTYMNNSGESVRAFMDYFKIDAS 105
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
V+V +DD+ L G LR+R G GGHNG+KS++ + G +F R+++G+G P +MD
Sbjct: 106 DVIVIYDDINLEPGNLRIRLKGSAGGHNGIKSLIAHM-GTSDFPRIKVGVGEKPTKMDLA 164
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
+L FN ++ +D A + +E ++LL++ + +N
Sbjct: 165 DHVLGHFNDEDKKLLDEAASDAIEAIRLLVAGEYDMAMNRYNV 207
>gi|227891597|ref|ZP_04009402.1| peptidyl-tRNA hydrolase [Lactobacillus salivarius ATCC 11741]
gi|227866744|gb|EEJ74165.1| peptidyl-tRNA hydrolase [Lactobacillus salivarius ATCC 11741]
Length = 200
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 7/167 (4%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+++ F E G + N + + F+ +++ KP TYMN SG + PL Y+ L
Sbjct: 40 VVERFVEEHGGNFNKEKFDSLISELFINGEKIIVIKPTTYMNESGRAVRPLMDYFNLTTE 99
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+++ HDDM L G LRLR G GGHNG+KS++++ G +F R+R+GI P +M
Sbjct: 100 DIIICHDDMDLEIGHLRLRQKGSAGGHNGIKSIISHV-GTEKFKRVRVGIDHPQ-KMSVV 157
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKY 167
++L +F ++D L V L E+ NT+ ++
Sbjct: 158 DWVLSRFTKEQEAKLDDGLTRAVAAL-----DDWIENDDFMNTMNRF 199
>gi|293388110|ref|ZP_06632637.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis S613]
gi|291082486|gb|EFE19449.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis S613]
Length = 188
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 85/163 (52%), Gaps = 4/163 (2%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D A Q +S N + +A + F+G VLL KP T+MN SG S GPL Y+
Sbjct: 26 LDEIAYRQNVSFNNSNFEADIAEFFIGTEKVLLVKPLTFMNESGRSVGPLLTYFGADEED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DD+ L G +RLR G GGHNG+KS++ + G F R++IGIGRP
Sbjct: 86 LIVIYDDLDLEVGKIRLRQKGSAGGHNGIKSLIAHL-GTNVFPRIKIGIGRPSKNDTVIH 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT--ESARHFN 162
+L F E I A+++ + L +G T E+ FN
Sbjct: 145 HVLSTFPKETHEEILLAVKKAADA-ALYACEGHTFVETMNQFN 186
>gi|403514293|ref|YP_006655113.1| peptidyl-tRNA hydrolase [Lactobacillus helveticus R0052]
gi|403079731|gb|AFR21309.1| peptidyl-tRNA hydrolase [Lactobacillus helveticus R0052]
Length = 185
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 86/150 (57%), Gaps = 2/150 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D + +G+S++ + + + + V+L +PQTYMN SG S +A ++K+
Sbjct: 26 MDHYLNEKGLSLDKDKFEGHWTKQKINGEDVILLEPQTYMNESGRSVSQIANFFKVDPED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
VL+ DDM +P G +R+R NG GGHNG+KS++ + G +F RL+IGI R P +
Sbjct: 86 VLIIQDDMDMPIGKIRIRANGKSGGHNGIKSIIRDL-GTEKFNRLKIGI-RHPKNTTVVS 143
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLS 151
++L FN ++ +D A V+++ ++
Sbjct: 144 WVLTPFNDEQQKLMDDAFDTSVKIIDDFIA 173
>gi|301300312|ref|ZP_07206519.1| aminoacyl-tRNA hydrolase [Lactobacillus salivarius ACS-116-V-Col5a]
gi|417787490|ref|ZP_12435173.1| peptidyl-tRNA hydrolase [Lactobacillus salivarius NIAS840]
gi|418961004|ref|ZP_13512891.1| peptidyl-tRNA hydrolase [Lactobacillus salivarius SMXD51]
gi|300852085|gb|EFK79762.1| aminoacyl-tRNA hydrolase [Lactobacillus salivarius ACS-116-V-Col5a]
gi|334307667|gb|EGL98653.1| peptidyl-tRNA hydrolase [Lactobacillus salivarius NIAS840]
gi|380344671|gb|EIA33017.1| peptidyl-tRNA hydrolase [Lactobacillus salivarius SMXD51]
Length = 185
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 86/167 (51%), Gaps = 7/167 (4%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+++ F E G + N + + F+ +++ KP TYMN SG + PL Y+ L
Sbjct: 25 VVERFVEEHGGNFNKEKFDSLISELFINGEKIIVIKPTTYMNESGRAVRPLMDYFNLTTE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+++ HDDM L G LRLR G GGHNG+KS++++ G +F R+R+GI P +M
Sbjct: 85 DIIICHDDMDLEIGHLRLRQKGSAGGHNGIKSIISHV-GTEKFKRVRVGIDHPQ-KMSVV 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKY 167
++L +F ++D L V L + E+ NT+ ++
Sbjct: 143 DWVLSRFTKEQEAKLDDGLTRAVAALDDWI-----ENDDFMNTMNRF 184
>gi|335042006|ref|ZP_08535033.1| peptidyl-tRNA hydrolase [Methylophaga aminisulfidivorans MP]
gi|333788620|gb|EGL54502.1| peptidyl-tRNA hydrolase [Methylophaga aminisulfidivorans MP]
Length = 190
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 81/132 (61%), Gaps = 1/132 (0%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V L KP T+MN SG+S PLA ++K+PL +LV HD++ L G ++L+ +GGHGGHNGL+
Sbjct: 59 VFLLKPLTFMNRSGQSVAPLANFFKIPLENILVIHDELDLSPGTVKLKRDGGHGGHNGLR 118
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
++ G ++F R R+GIG P ++L K + R++I+ A+ + +L +LS
Sbjct: 119 DIIAQ-TGGKQFLRCRLGIGHPGHSKLVSDYVLSKPSPTDRQQIEQAIDNVLRILPEVLS 177
Query: 152 KGLTESARHFNT 163
+ ++ ++
Sbjct: 178 GNMDKAMNWLHS 189
>gi|119715157|ref|YP_922122.1| peptidyl-tRNA hydrolase [Nocardioides sp. JS614]
gi|119535818|gb|ABL80435.1| peptidyl-tRNA hydrolase [Nocardioides sp. JS614]
Length = 217
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 82/132 (62%), Gaps = 1/132 (0%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+L + + YMN +G LA +YK+P R++ HD++ + +R++ GG GHNGL+
Sbjct: 87 VVLMRARCYMNETGGPVKQLAGFYKVPPERIIAVHDELDIAFDTMRVKLGGGDNGHNGLR 146
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ ++ G +F R+R+GIGRPPG+ DP F+L +++ R+ + + + ++ L++
Sbjct: 147 SMRSSL-GTGDFYRVRVGIGRPPGRQDPADFVLSNYSSSERKVLPFQVDRAADAVEALVT 205
Query: 152 KGLTESARHFNT 163
+GL + + FN+
Sbjct: 206 EGLERTQQRFNS 217
>gi|375111019|ref|ZP_09757231.1| peptidyl-tRNA hydrolase [Alishewanella jeotgali KCTC 22429]
gi|397169688|ref|ZP_10493119.1| peptidyl-tRNA hydrolase [Alishewanella aestuarii B11]
gi|374568849|gb|EHR40020.1| peptidyl-tRNA hydrolase [Alishewanella jeotgali KCTC 22429]
gi|396088676|gb|EJI86255.1| peptidyl-tRNA hydrolase [Alishewanella aestuarii B11]
Length = 200
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 74/129 (57%)
Query: 37 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 96
P TYMNLSG++ +A +YKL ++LV HD++ LP G + + GGH GHNGL+ + +
Sbjct: 70 PTTYMNLSGKAVLAMAQFYKLAPEQILVVHDELALPPGSAKFKFAGGHAGHNGLRDITSK 129
Query: 97 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 156
N F RLR+GIG P + F+L K A ++ ID +++E V +L GL +
Sbjct: 130 LGNNPNFYRLRLGIGHPGHKDQVTGFVLGKAPASEQKLIDQSIEEAVACFAILARDGLVK 189
Query: 157 SARHFNTIQ 165
+ ++ Q
Sbjct: 190 AQSRLHSFQ 198
>gi|256372366|ref|YP_003110190.1| peptidyl-tRNA hydrolase [Acidimicrobium ferrooxidans DSM 10331]
gi|256008950|gb|ACU54517.1| peptidyl-tRNA hydrolase [Acidimicrobium ferrooxidans DSM 10331]
Length = 192
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 91/162 (56%), Gaps = 3/162 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PLN 60
+D A + + H ++ G G +GD +LA PQTYMN SG + G + Y+ P+
Sbjct: 25 VDLLARRLDVRLTPGH-RSIVGSGRLGDHRAVLAVPQTYMNDSGAAVGAVLRYFHADPVT 83
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+++V HD++ L G ++L++ GG GHNGL+S++ + G R+F R+RIGIGRP G+
Sbjct: 84 QLVVVHDELDLVLGRVQLKYGGGLAGHNGLRSIVAHI-GTRDFWRVRIGIGRPAGRQAVV 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L + R D ++ G + + L+S G + +N
Sbjct: 143 DWVLTEVRGPERTSFDVGVERGADAVVDLVSLGPERAMTTYN 184
>gi|161506854|ref|YP_001576808.1| peptidyl-tRNA hydrolase [Lactobacillus helveticus DPC 4571]
gi|172048360|sp|A8YXI6.1|PTH_LACH4 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|160347843|gb|ABX26517.1| Peptidyl-trna hydrolase_290 [Lactobacillus helveticus DPC 4571]
Length = 185
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 86/150 (57%), Gaps = 2/150 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D + +G+S++ + + + + V+L +PQTYMN SG S +A ++K+
Sbjct: 26 LDHYLNEKGLSLDKDKFEGHWTKQKINGEDVILLEPQTYMNESGRSVSQIANFFKVAPED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
VL+ DDM +P G +R+R NG GGHNG+KS++ + G +F RL+IGI R P +
Sbjct: 86 VLIIQDDMDMPIGKIRIRANGKSGGHNGIKSIIRDL-GTEKFNRLKIGI-RHPKNTTVVS 143
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLS 151
++L FN ++ +D A V+++ ++
Sbjct: 144 WVLTPFNDEQQKLMDDAFDTSVKIIDDFIA 173
>gi|17228339|ref|NP_484887.1| peptidyl-tRNA hydrolase [Nostoc sp. PCC 7120]
gi|21263848|sp|Q8YYK4.1|PTH_ANASP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|17130189|dbj|BAB72801.1| peptidyl-tRNA hydrolase [Nostoc sp. PCC 7120]
Length = 203
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 94/169 (55%), Gaps = 8/169 (4%)
Query: 2 IDAFAESQGISM-NTVHCKATFGQGFV-GDAPVLLAKPQTYMNLSGESTGPLAAYYKLPL 59
+DA A + IS+ + +G+G G + L KP TYMN SG++ + ++YKL
Sbjct: 28 VDALARAWNISLAENRKFQGQYGEGTAPGGVKIRLLKPLTYMNRSGQAIQAVTSWYKLSG 87
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQM-- 117
VLV +DD+ LP G RLR +G GGHNG+KS + + + F RLRIGIG+P +
Sbjct: 88 ESVLVIYDDLDLPLGKTRLRLSGSAGGHNGMKSAIAHL-STQNFPRLRIGIGKPKNAVNG 146
Query: 118 ---DPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
+ + +L KF+A + + LQ VE ++L L +G+ ++ N+
Sbjct: 147 DNSETVSHVLGKFSATETQLMSLVLQFVVECVELSLKQGVEKAMNRCNS 195
>gi|227520042|ref|ZP_03950091.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0104]
gi|229550503|ref|ZP_04439228.1| peptidyl-tRNA hydrolase [Enterococcus faecalis ATCC 29200]
gi|256618333|ref|ZP_05475179.1| peptidyl-tRNA hydrolase [Enterococcus faecalis ATCC 4200]
gi|256762051|ref|ZP_05502631.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T3]
gi|256956815|ref|ZP_05560986.1| peptidyl-tRNA hydrolase [Enterococcus faecalis DS5]
gi|256964179|ref|ZP_05568350.1| peptidyl-tRNA hydrolase [Enterococcus faecalis HIP11704]
gi|257078485|ref|ZP_05572846.1| peptidyl-tRNA hydrolase [Enterococcus faecalis JH1]
gi|257081544|ref|ZP_05575905.1| peptidyl-tRNA hydrolase [Enterococcus faecalis E1Sol]
gi|257084192|ref|ZP_05578553.1| peptidyl-tRNA hydrolase [Enterococcus faecalis Fly1]
gi|257088019|ref|ZP_05582380.1| peptidyl-tRNA hydrolase [Enterococcus faecalis D6]
gi|257088696|ref|ZP_05583057.1| peptidyl-tRNA hydrolase [Enterococcus faecalis CH188]
gi|257417622|ref|ZP_05594616.1| peptidyl-tRNA hydrolase [Enterococcus faecalis ARO1/DG]
gi|294779318|ref|ZP_06744721.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis PC1.1]
gi|300862116|ref|ZP_07108196.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis TUSoD Ef11]
gi|307268509|ref|ZP_07549884.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX4248]
gi|307274220|ref|ZP_07555428.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0855]
gi|307276445|ref|ZP_07557568.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX2134]
gi|307286965|ref|ZP_07567040.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0109]
gi|312901072|ref|ZP_07760361.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0470]
gi|312904635|ref|ZP_07763790.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0635]
gi|384512164|ref|YP_005707257.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis OG1RF]
gi|397698778|ref|YP_006536566.1| peptidyl-tRNA hydrolase [Enterococcus faecalis D32]
gi|422687623|ref|ZP_16745799.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0630]
gi|422700061|ref|ZP_16757917.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX1342]
gi|422702616|ref|ZP_16760445.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX1302]
gi|422708809|ref|ZP_16766330.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0027]
gi|422719760|ref|ZP_16776384.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0017]
gi|422723128|ref|ZP_16779666.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX2137]
gi|422728432|ref|ZP_16784850.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0012]
gi|422733278|ref|ZP_16789599.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0645]
gi|422738808|ref|ZP_16793995.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX2141]
gi|422867413|ref|ZP_16913998.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis TX1467]
gi|424671698|ref|ZP_18108689.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis 599]
gi|424678903|ref|ZP_18115741.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV103]
gi|424679718|ref|ZP_18116532.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV116]
gi|424684125|ref|ZP_18120851.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV129]
gi|424688434|ref|ZP_18125040.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV25]
gi|424691550|ref|ZP_18128073.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV31]
gi|424695120|ref|ZP_18131504.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV37]
gi|424696490|ref|ZP_18132835.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV41]
gi|424701878|ref|ZP_18138044.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV62]
gi|424704936|ref|ZP_18141022.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV63]
gi|424706359|ref|ZP_18142366.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV65]
gi|424719050|ref|ZP_18148278.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV68]
gi|424719970|ref|ZP_18149096.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV72]
gi|424722745|ref|ZP_18151770.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV73]
gi|424733454|ref|ZP_18162014.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV81]
gi|424735226|ref|ZP_18163696.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV85]
gi|424754570|ref|ZP_18182479.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV93]
gi|424755706|ref|ZP_18183567.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis R508]
gi|428765877|ref|YP_007151988.1| peptidyl-tRNA hydrolase [Enterococcus faecalis str. Symbioflor 1]
gi|430362591|ref|ZP_19427135.1| peptidyl-tRNA hydrolase [Enterococcus faecalis OG1X]
gi|430368664|ref|ZP_19428345.1| peptidyl-tRNA hydrolase [Enterococcus faecalis M7]
gi|227072590|gb|EEI10553.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0104]
gi|229304360|gb|EEN70356.1| peptidyl-tRNA hydrolase [Enterococcus faecalis ATCC 29200]
gi|256597860|gb|EEU17036.1| peptidyl-tRNA hydrolase [Enterococcus faecalis ATCC 4200]
gi|256683302|gb|EEU22997.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T3]
gi|256947311|gb|EEU63943.1| peptidyl-tRNA hydrolase [Enterococcus faecalis DS5]
gi|256954675|gb|EEU71307.1| peptidyl-tRNA hydrolase [Enterococcus faecalis HIP11704]
gi|256986515|gb|EEU73817.1| peptidyl-tRNA hydrolase [Enterococcus faecalis JH1]
gi|256989574|gb|EEU76876.1| peptidyl-tRNA hydrolase [Enterococcus faecalis E1Sol]
gi|256992222|gb|EEU79524.1| peptidyl-tRNA hydrolase [Enterococcus faecalis Fly1]
gi|256996049|gb|EEU83351.1| peptidyl-tRNA hydrolase [Enterococcus faecalis D6]
gi|256997508|gb|EEU84028.1| peptidyl-tRNA hydrolase [Enterococcus faecalis CH188]
gi|257159450|gb|EEU89410.1| peptidyl-tRNA hydrolase [Enterococcus faecalis ARO1/DG]
gi|294453604|gb|EFG22003.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis PC1.1]
gi|295112542|emb|CBL31179.1| peptidyl-tRNA hydrolase [Enterococcus sp. 7L76]
gi|300848641|gb|EFK76398.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis TUSoD Ef11]
gi|306501911|gb|EFM71200.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0109]
gi|306506925|gb|EFM76072.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX2134]
gi|306509182|gb|EFM78244.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0855]
gi|306515170|gb|EFM83710.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX4248]
gi|310631987|gb|EFQ15270.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0635]
gi|311291818|gb|EFQ70374.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0470]
gi|315026786|gb|EFT38718.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX2137]
gi|315032976|gb|EFT44908.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0017]
gi|315036611|gb|EFT48543.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0027]
gi|315145386|gb|EFT89402.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX2141]
gi|315151126|gb|EFT95142.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0012]
gi|315160776|gb|EFU04793.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0645]
gi|315165852|gb|EFU09869.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX1302]
gi|315171411|gb|EFU15428.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX1342]
gi|315579375|gb|EFU91566.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0630]
gi|327534053|gb|AEA92887.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis OG1RF]
gi|329577442|gb|EGG58891.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis TX1467]
gi|397335417|gb|AFO43089.1| peptidyl-tRNA hydrolase [Enterococcus faecalis D32]
gi|402350606|gb|EJU85508.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV103]
gi|402355673|gb|EJU90435.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV116]
gi|402357966|gb|EJU92654.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis 599]
gi|402360878|gb|EJU95472.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV25]
gi|402362105|gb|EJU96645.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV31]
gi|402362682|gb|EJU97200.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV129]
gi|402368967|gb|EJV03266.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV37]
gi|402370842|gb|EJV05031.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV62]
gi|402377532|gb|EJV11430.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV41]
gi|402380126|gb|EJV13895.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV68]
gi|402380546|gb|EJV14296.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV63]
gi|402388167|gb|EJV21616.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV65]
gi|402391822|gb|EJV25102.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV81]
gi|402394933|gb|EJV28080.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV72]
gi|402400927|gb|EJV33732.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV73]
gi|402403019|gb|EJV35711.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV93]
gi|402404116|gb|EJV36747.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV85]
gi|402408991|gb|EJV41437.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis R508]
gi|427184050|emb|CCO71274.1| peptidyl-tRNA hydrolase [Enterococcus faecalis str. Symbioflor 1]
gi|429512105|gb|ELA01724.1| peptidyl-tRNA hydrolase [Enterococcus faecalis OG1X]
gi|429516108|gb|ELA05603.1| peptidyl-tRNA hydrolase [Enterococcus faecalis M7]
Length = 188
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 86/163 (52%), Gaps = 4/163 (2%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D A Q +S N + +A + F+G VLL KP T+MN SG S GPL Y+ +
Sbjct: 26 LDEIAYRQNVSFNNSNFEADIAEFFIGTEKVLLVKPLTFMNESGRSVGPLLTYFGVDEED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DD+ L G +RLR G GGHNG+KS++ + G F R++IGIGRP
Sbjct: 86 LIVIYDDLDLEVGKIRLRQKGSAGGHNGIKSLIAHL-GTNVFPRIKIGIGRPSKNDTVIH 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT--ESARHFN 162
+L F E + A+++ + L +G T E+ FN
Sbjct: 145 HVLSTFPKETHEEMLLAVKKAADA-ALYACEGHTFVETMNQFN 186
>gi|227894500|ref|ZP_04012305.1| peptidyl-tRNA hydrolase [Lactobacillus ultunensis DSM 16047]
gi|227863659|gb|EEJ71080.1| peptidyl-tRNA hydrolase [Lactobacillus ultunensis DSM 16047]
Length = 185
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 86/150 (57%), Gaps = 2/150 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D + +G+S++ + + + V V+L +PQTYMN SG S +A ++K+
Sbjct: 26 MDHYLNEKGLSLDKDKFEGHWTKQKVNGEDVILLEPQTYMNESGRSVSQVANFFKVDPED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
VL+ DDM +P G +R+R NG GGHNG+KS++ + G +F RL+IGI R P +
Sbjct: 86 VLIIQDDMDMPIGKIRIRANGKSGGHNGIKSIIRDL-GTEKFNRLKIGI-RHPKNATVVS 143
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLS 151
++L FN ++ +D A V+++ ++
Sbjct: 144 WVLTPFNDEQQKLMDDAFDTSVKIIDDFIA 173
>gi|75910645|ref|YP_324941.1| peptidyl-tRNA hydrolase [Anabaena variabilis ATCC 29413]
gi|119390911|sp|Q3M4P0.1|PTH_ANAVT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|75704370|gb|ABA24046.1| peptidyl-tRNA hydrolase [Anabaena variabilis ATCC 29413]
Length = 213
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 94/169 (55%), Gaps = 8/169 (4%)
Query: 2 IDAFAESQGISM-NTVHCKATFGQGFV-GDAPVLLAKPQTYMNLSGESTGPLAAYYKLPL 59
+DA A + IS+ + +G+G G + L KP TYMN SG++ + ++YKL
Sbjct: 38 VDALARAWNISLAENRKFQGQYGEGTAPGGVKIRLLKPLTYMNRSGQAIQAVTSWYKLSG 97
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQM-- 117
VLV +DD+ LP G RLR +G GGHNG+KS + + + F RLRIGIG+P +
Sbjct: 98 ESVLVIYDDLDLPLGKTRLRLSGSAGGHNGMKSAIAHL-STQNFPRLRIGIGKPKNAVNG 156
Query: 118 ---DPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
+ + +L KF+A + + LQ VE ++L L +G+ ++ N+
Sbjct: 157 DNSETVSHVLGKFSATETQLMSLVLQFVVECVELSLKQGVEKAMNRCNS 205
>gi|311743168|ref|ZP_07716976.1| aminoacyl-tRNA hydrolase [Aeromicrobium marinum DSM 15272]
gi|311313848|gb|EFQ83757.1| aminoacyl-tRNA hydrolase [Aeromicrobium marinum DSM 15272]
Length = 188
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 91/163 (55%), Gaps = 2/163 (1%)
Query: 1 MIDAFAESQGISMNTVHC-KATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPL 59
+ D AE G + +A +G + V+L + ++YMN SG +A ++ +
Sbjct: 26 VTDVLAERVGGRWKSHRASRAEVVEGRLAGERVVLGRSRSYMNESGGPVKAMATFFDVEP 85
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
++V HD++ + G LRL+ GG GHNGLKS+ + G +F R+R+GIGRPPGQ
Sbjct: 86 EHLVVVHDELDIDFGQLRLKLGGGDNGHNGLKSIRGSL-GTGDFHRVRVGIGRPPGQQTV 144
Query: 120 KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L+ ++A R+ +D + E + ++ LL++GL + FN
Sbjct: 145 HDYVLKPWSAAERKELDLNVVEAADAVESLLTRGLEATQSAFN 187
>gi|403250962|ref|ZP_10917341.1| peptidyl-tRNA hydrolase [actinobacterium SCGC AAA027-L06]
gi|402915761|gb|EJX36705.1| peptidyl-tRNA hydrolase [actinobacterium SCGC AAA027-L06]
Length = 187
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 83/132 (62%), Gaps = 1/132 (0%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
++LAK + YMN +G L+ +YK+ +++++V HD++ LP LR++ GG GHNGLK
Sbjct: 57 LVLAKSRGYMNETGGPAKALSDFYKIEVSKIIVVHDELDLPFNSLRIKLGGGDNGHNGLK 116
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ +++ ++ R+R+GIGRP G+ DP F+L+ F+ R+ + G + ++ L+
Sbjct: 117 SLTSSY-STSDYYRIRMGIGRPIGEQDPADFVLKPFSKEERKELQEFNSRGAQAIQSLVV 175
Query: 152 KGLTESARHFNT 163
G+ ++ FN+
Sbjct: 176 NGMDKAQTAFNS 187
>gi|395241897|ref|ZP_10418897.1| Peptidyl-tRNA hydrolase [Lactobacillus pasteurii CRBIP 24.76]
gi|394480645|emb|CCI85137.1| Peptidyl-tRNA hydrolase [Lactobacillus pasteurii CRBIP 24.76]
Length = 200
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 86/145 (59%), Gaps = 2/145 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
++ + + ++++ + + + V V+L +PQT+MN SG S +A ++K+
Sbjct: 41 LETYLKKNSLTLDKNKFEGLWTKFRVNGEDVVLLEPQTFMNESGRSISQVANFFKVDPED 100
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+LV HDDM +P G +R+R NG GGHNG+KS++ + G +F RL+IGI R P ++ +
Sbjct: 101 ILVIHDDMDMPIGKIRIRANGKSGGHNGIKSIIRDL-GTEKFNRLKIGI-RHPEKVSVVS 158
Query: 122 FLLQKFNAIARERIDTALQEGVEVL 146
++L FN +E +D A + V ++
Sbjct: 159 WVLTPFNKEQQELMDQAFEASVNII 183
>gi|29374897|ref|NP_814050.1| peptidyl-tRNA hydrolase [Enterococcus faecalis V583]
gi|227555902|ref|ZP_03985949.1| peptidyl-tRNA hydrolase [Enterococcus faecalis HH22]
gi|257418652|ref|ZP_05595646.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T11]
gi|422712942|ref|ZP_16769702.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0309A]
gi|422718240|ref|ZP_16774911.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0309B]
gi|46576784|sp|Q839C0.1|PTH_ENTFA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|29342355|gb|AAO80121.1| peptidyl-tRNA hydrolase [Enterococcus faecalis V583]
gi|227174959|gb|EEI55931.1| peptidyl-tRNA hydrolase [Enterococcus faecalis HH22]
gi|257160480|gb|EEU90440.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T11]
gi|315573563|gb|EFU85754.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0309B]
gi|315582089|gb|EFU94280.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0309A]
Length = 188
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 86/163 (52%), Gaps = 4/163 (2%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D A Q +S N + +A + F+G VLL KP T+MN SG S GPL Y+ +
Sbjct: 26 LDEIAYRQNVSFNNSNFEADIAEFFIGTEKVLLVKPLTFMNESGRSVGPLLTYFGVDEED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DD+ L G +RLR G GGHNG+KS++ + G F R++IGIGRP
Sbjct: 86 LIVIYDDLDLEIGKIRLRQKGSAGGHNGIKSLIAHL-GTNVFPRIKIGIGRPSKNDTVIH 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT--ESARHFN 162
+L F E + A+++ + L +G T E+ FN
Sbjct: 145 HVLSTFPKETHEEMLLAVKKAADA-ALYACEGHTFVETMNQFN 186
>gi|257064879|ref|YP_003144551.1| peptidyl-tRNA hydrolase [Slackia heliotrinireducens DSM 20476]
gi|256792532|gb|ACV23202.1| peptidyl-tRNA hydrolase [Slackia heliotrinireducens DSM 20476]
Length = 190
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 88/166 (53%), Gaps = 2/166 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PLN 60
+ AE ++ C A + VLLAKPQ++MN+SG L A Y++ P
Sbjct: 26 VSLLAEELRVNYWKTECGALTAKTTYRGEDVLLAKPQSFMNVSGGPVKQLCAKYEVDPKT 85
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V HD++ + G +R++ GG GHNGLKS+ + R++ R+RIGIGRPPG+M
Sbjct: 86 DLIVIHDELDIDPGTIRVKFGGGLAGHNGLKSIDAKLQ-TRDWLRIRIGIGRPPGRMPVT 144
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 166
++L K A + Q G E + + GL ++ + +N+ K
Sbjct: 145 DWVLSKPKKEAWDDFVQGTQLGCEAVLYYMDNGLDKAQQKYNSSAK 190
>gi|268592702|ref|ZP_06126923.1| aminoacyl-tRNA hydrolase [Providencia rettgeri DSM 1131]
gi|291311844|gb|EFE52297.1| aminoacyl-tRNA hydrolase [Providencia rettgeri DSM 1131]
Length = 196
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 76/126 (60%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
+ L P T+MNLSG+S +A +Y++ L+ +LV HD++ LP GV +++ G +GGHNGLK
Sbjct: 60 IRLLVPTTFMNLSGKSVAAIANFYRINLDEILVAHDELDLPPGVAKMKLGGSNGGHNGLK 119
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
+ + F N F RLRIGIG P + F+L K ++ ID A+ E +LL+
Sbjct: 120 DIQSKFANNPNFYRLRIGIGHPGDKNKVVGFVLGKPPLSEQKLIDDAIDEAARCTDILLA 179
Query: 152 KGLTES 157
G+ ++
Sbjct: 180 DGMGKA 185
>gi|302336342|ref|YP_003801549.1| peptidyl-tRNA hydrolase [Olsenella uli DSM 7084]
gi|301320182|gb|ADK68669.1| peptidyl-tRNA hydrolase [Olsenella uli DSM 7084]
Length = 197
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 71/130 (54%), Gaps = 1/130 (0%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
VLLAKPQ YMN+SG L + VLV HD++ LP GV+R++ GG HNGL+
Sbjct: 68 VLLAKPQAYMNVSGGPLSKLMRQRGISAQEVLVVHDEVDLPSGVVRVKSGGGLNAHNGLR 127
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ + G R+FAR+R GIGRPPG+M F L++ + Q + +L L
Sbjct: 128 SIADKL-GTRDFARVRCGIGRPPGRMSVADFALRQLKGSFLADFELGAQRAADACELCLD 186
Query: 152 KGLTESARHF 161
+G+ +
Sbjct: 187 QGVARAVEQL 196
>gi|88861338|ref|ZP_01135968.1| peptidyl-tRNA hydrolase [Pseudoalteromonas tunicata D2]
gi|88816604|gb|EAR26429.1| peptidyl-tRNA hydrolase [Pseudoalteromonas tunicata D2]
Length = 189
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 88/143 (61%)
Query: 23 GQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNG 82
G+ F+ D LL P TYMNLSG+S LA ++K+P+ +LV HD+M LP GV + + G
Sbjct: 46 GKIFIQDQEFLLLIPTTYMNLSGKSVSALANFFKIPVENILVAHDEMDLPTGVAKFKRGG 105
Query: 83 GHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEG 142
GHGGHNGLK ++ N+EF RLR+GIG P + ++L K + +E++D A+ E
Sbjct: 106 GHGGHNGLKDIIAKMANNKEFLRLRVGIGHPGHREMVTGWVLGKASKAEQEQMDAAVDEA 165
Query: 143 VEVLKLLLSKGLTESARHFNTIQ 165
V +++L G+ ++ ++ +
Sbjct: 166 VRCMEILAKDGVLKAQNRLHSFK 188
>gi|373251528|ref|ZP_09539646.1| peptidyl-tRNA hydrolase [Nesterenkonia sp. F]
Length = 187
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 79/130 (60%)
Query: 28 GDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGH 87
G +L A + YMN SG+ L YY + R++V HD++ L ++L+ G GGH
Sbjct: 51 GGPKMLFAVSEGYMNTSGQPIRRLMDYYDVDPARLIVVHDEVDLDFERIKLKRGGSEGGH 110
Query: 88 NGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 147
NGLKS+ + G+R++ R+R+G+ RPPG+MD ++LQ F+A R+ + LQ + ++
Sbjct: 111 NGLKSITQHLGGDRDYIRVRVGVSRPPGRMDTADYVLQNFSAEERKALPQLLQRAGDAVE 170
Query: 148 LLLSKGLTES 157
+++ GLT +
Sbjct: 171 NVITDGLTAA 180
>gi|440231212|ref|YP_007345005.1| peptidyl-tRNA hydrolase [Serratia marcescens FGI94]
gi|440052917|gb|AGB82820.1| peptidyl-tRNA hydrolase [Serratia marcescens FGI94]
Length = 191
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 77/126 (61%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V L P T+MNLSG++ +A++Y++ + +LV HD++ LP G+ +L+ G +GGHNGLK
Sbjct: 55 VRLLVPTTFMNLSGKAVAAMASFYRIQPDEILVAHDELDLPPGIAKLKLGGSNGGHNGLK 114
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
+ + N F RLRIGIG P + F+L K A + ID A+ E + ++LL
Sbjct: 115 DIQSKMANNPNFYRLRIGIGHPGDRNKVVGFVLGKPPASEQSLIDDAIDESLRCTEVLLK 174
Query: 152 KGLTES 157
G+T++
Sbjct: 175 DGMTKA 180
>gi|425433736|ref|ZP_18814214.1| Peptidyl-tRNA hydrolase [Microcystis aeruginosa PCC 9432]
gi|389675713|emb|CCH95215.1| Peptidyl-tRNA hydrolase [Microcystis aeruginosa PCC 9432]
Length = 208
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 94/167 (56%), Gaps = 12/167 (7%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFV--GDAP----VLLAKPQTYMNLSGESTGPLAAYY 55
+D+ A G+S F QGF+ GD+P + L KPQTYMN SG+S + +Y
Sbjct: 37 VDSLARDWGLSWQE---NKRF-QGFIAEGDSPLPGKIRLLKPQTYMNRSGQSVRAVLDWY 92
Query: 56 KLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPG 115
KL +LV +DDM LP G LR+R +G GGHNG+KS++ + G +FARLRIGIG+
Sbjct: 93 KLAPESILVIYDDMDLPLGRLRIRLSGSAGGHNGIKSMIAHV-GTEKFARLRIGIGK-SS 150
Query: 116 QMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+ + +L +F E I L + ++L L +GL ++ +N
Sbjct: 151 EKATISHVLGRFTPQENEVILKVLDLSRKAIELGLKQGLQKAMSLYN 197
>gi|255974756|ref|ZP_05425342.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T2]
gi|256855210|ref|ZP_05560571.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T8]
gi|307278655|ref|ZP_07559725.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0860]
gi|307290198|ref|ZP_07570116.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0411]
gi|422686434|ref|ZP_16744631.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX4000]
gi|255967628|gb|EET98250.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T2]
gi|256709723|gb|EEU24770.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T8]
gi|306498754|gb|EFM68253.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0411]
gi|306504715|gb|EFM73915.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0860]
gi|315028826|gb|EFT40758.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX4000]
Length = 188
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 68/112 (60%), Gaps = 1/112 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D A Q +S N + +A + F+G VLL KP T+MN SG S GPL Y+ +
Sbjct: 26 LDEIAYRQNVSFNNSNFEADIAEFFIGTEKVLLVKPLTFMNESGRSVGPLLTYFGVDEED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRP 113
++V +DD+ L G +RLR G GGHNG+KS++ + G F R++IGIGRP
Sbjct: 86 LIVIYDDLDLEVGKIRLRQKGSAGGHNGIKSLIAHL-GTNVFPRIKIGIGRP 136
>gi|338536293|ref|YP_004669627.1| peptidyl-tRNA hydrolase [Myxococcus fulvus HW-1]
gi|337262389|gb|AEI68549.1| peptidyl-tRNA hydrolase [Myxococcus fulvus HW-1]
Length = 191
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 96/165 (58%), Gaps = 4/165 (2%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+++A +N A GQG +G VL +PQT+MNLSG S G A +YK+P+
Sbjct: 25 VVEALLSRARAELNQGKFAARAGQGTLGGERVLFLEPQTFMNLSGRSVGEAARFYKVPVA 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPG---QM 117
VLV HD++ LP G L+L+ GG GGHNGLKS++++ G+ F RLR GIG+P G +
Sbjct: 85 DVLVIHDELDLPLGRLQLKAGGGSGGHNGLKSIVSSL-GDEGFIRLRFGIGKPEGPNARE 143
Query: 118 DPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F+ R +D + +++ +L L +GL+ + FN
Sbjct: 144 RVSGYVLSNFDDGERRELDALIDRAMDMTELWLREGLSVAMNRFN 188
>gi|326332303|ref|ZP_08198583.1| aminoacyl-tRNA hydrolase [Nocardioidaceae bacterium Broad-1]
gi|325950009|gb|EGD42069.1| aminoacyl-tRNA hydrolase [Nocardioidaceae bacterium Broad-1]
Length = 203
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 82/132 (62%), Gaps = 1/132 (0%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+LA+ +TYMN SG LA +YK+ + V+ HD++ + +R++ GG GHNGLK
Sbjct: 73 VVLARSRTYMNESGGPVKALATFYKVQPDHVIAIHDELDIAFDTMRVKLGGGDNGHNGLK 132
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ ++ G +F R+R+GIGRPPG+ + F+L F+ R+ + + + ++ L++
Sbjct: 133 SMRSSL-GTGDFHRVRVGIGRPPGRQEVHDFVLSNFSTTERKVLPFVVDTAADAIETLIT 191
Query: 152 KGLTESARHFNT 163
+GL ++ + FN+
Sbjct: 192 EGLEKTQQRFNS 203
>gi|315606043|ref|ZP_07881074.1| aminoacyl-tRNA hydrolase [Actinomyces sp. oral taxon 180 str.
F0310]
gi|315312325|gb|EFU60411.1| aminoacyl-tRNA hydrolase [Actinomyces sp. oral taxon 180 str.
F0310]
Length = 203
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 84/130 (64%), Gaps = 1/130 (0%)
Query: 34 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 93
LA+ +YMN SG LA++ K+ +R+LV HDDM LP LRL+ GG GGHNGLKS+
Sbjct: 70 LARADSYMNTSGGPIAALASFLKILPSRILVIHDDMDLPAHTLRLKVGGGEGGHNGLKSL 129
Query: 94 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 153
++ G R++ARLRIG+GRPPG+MDP ++L A R D ++ +V++ ++++G
Sbjct: 130 SSHL-GTRDYARLRIGVGRPPGRMDPADYVLSALPAKERPDWDVTFEQASDVVEDIVTRG 188
Query: 154 LTESARHFNT 163
+ + +T
Sbjct: 189 FAPTQQDLHT 198
>gi|374290018|ref|YP_005037103.1| Peptidyl-tRNA hydrolase [Bacteriovorax marinus SJ]
gi|301168559|emb|CBW28149.1| Peptidyl-tRNA hydrolase [Bacteriovorax marinus SJ]
Length = 190
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 78/131 (59%), Gaps = 2/131 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+ KPQT+MNLSGES PLA ++K+P+ +LV HD++ L G + + GG GHNGLK
Sbjct: 57 VIFLKPQTFMNLSGESVAPLANFFKIPVEDILVVHDELDLNFGTIAYKDGGGLAGHNGLK 116
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ G + F RLR+GIGRP ++L ++ E +++ L+ + ++ +
Sbjct: 117 SIAQCL-GKQNFKRLRVGIGRPV-HGSVSNWVLSGYHGEDAEFLESYLKGAAKAVEAYIE 174
Query: 152 KGLTESARHFN 162
KG +AR ++
Sbjct: 175 KGFQSAARTYS 185
>gi|422390012|ref|ZP_16470109.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes HL103PA1]
gi|422464039|ref|ZP_16540652.1| putative peptidyl-tRNA hydrolase [Propionibacterium acnes HL060PA1]
gi|422468927|ref|ZP_16545458.1| putative peptidyl-tRNA hydrolase [Propionibacterium acnes HL110PA3]
gi|422566349|ref|ZP_16641988.1| putative peptidyl-tRNA hydrolase [Propionibacterium acnes HL082PA2]
gi|422577151|ref|ZP_16652688.1| putative peptidyl-tRNA hydrolase [Propionibacterium acnes HL001PA1]
gi|314922166|gb|EFS85997.1| putative peptidyl-tRNA hydrolase [Propionibacterium acnes HL001PA1]
gi|314965249|gb|EFT09348.1| putative peptidyl-tRNA hydrolase [Propionibacterium acnes HL082PA2]
gi|314982386|gb|EFT26479.1| putative peptidyl-tRNA hydrolase [Propionibacterium acnes HL110PA3]
gi|315094009|gb|EFT65985.1| putative peptidyl-tRNA hydrolase [Propionibacterium acnes HL060PA1]
gi|327329539|gb|EGE71299.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes HL103PA1]
Length = 136
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 80/132 (60%), Gaps = 1/132 (0%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+L + +TYMN SG + +A++ + + ++V HD++ L G LRL+ GG GHNGLK
Sbjct: 6 VILMRSRTYMNESGIAVSKVASFAGMTPDHLIVVHDEIDLDPGRLRLKKGGGDNGHNGLK 65
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
SV + R +F R+R+G+GRPPG+ DP ++L + R +D + + ++ ++
Sbjct: 66 SVRAHMRTG-DFIRVRVGVGRPPGRQDPADWVLARVPVRQRTDMDVQVALAADAVETIIK 124
Query: 152 KGLTESARHFNT 163
+GLT + FN+
Sbjct: 125 QGLTVAQNRFNS 136
>gi|453076382|ref|ZP_21979158.1| peptidyl-tRNA hydrolase [Rhodococcus triatomae BKS 15-14]
gi|452761248|gb|EME19558.1| peptidyl-tRNA hydrolase [Rhodococcus triatomae BKS 15-14]
Length = 192
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 83/123 (67%), Gaps = 1/123 (0%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+LAKP++YMNLSG LA ++ + ++V HD++ L G LRL+ GG GGHNGL+
Sbjct: 63 VILAKPRSYMNLSGRPVAALARFFSVDPGNLVVVHDELDLDYGTLRLKLGGGEGGHNGLR 122
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ G +++ R R+GIGRPPG+MDP ++L+ F+++ R+ +D +E + ++LLL
Sbjct: 123 SISQAL-GTKDYLRTRVGIGRPPGRMDPADYVLKPFSSVERKELDLVCEEAADAVELLLR 181
Query: 152 KGL 154
GL
Sbjct: 182 VGL 184
>gi|384134026|ref|YP_005516740.1| peptidyl-tRNA hydrolase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
gi|339288111|gb|AEJ42221.1| peptidyl-tRNA hydrolase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length = 191
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 72/128 (56%), Gaps = 2/128 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PLN 60
ID AE ++ A G VLL KP TYMN+SG G + YY++ P
Sbjct: 26 IDTLAEKLAARVDQADFHALVGDARYAGEKVLLVKPHTYMNVSGLCVGEIVRYYRIDPAE 85
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DDM P GV+RL+ G GGHNG+KS++ ++ G +F R+RIGIGRPP
Sbjct: 86 DLMVLYDDMDFPPGVVRLKAQGSAGGHNGIKSII-DWLGTEKFGRVRIGIGRPPKGAPIV 144
Query: 121 AFLLQKFN 128
++L F+
Sbjct: 145 PYVLGAFS 152
>gi|444431725|ref|ZP_21226889.1| peptidyl-tRNA hydrolase [Gordonia soli NBRC 108243]
gi|443887565|dbj|GAC68610.1| peptidyl-tRNA hydrolase [Gordonia soli NBRC 108243]
Length = 190
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 96/154 (62%), Gaps = 6/154 (3%)
Query: 16 VHCK--ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPC 73
VH K A +G VL+AKP+TYMN SG PL +Y + ++V HD++ +
Sbjct: 41 VHKKSGAELASLVLGGEQVLVAKPRTYMNESGRQVAPLMKFYSVAAADLVVVHDELDIDF 100
Query: 74 GVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARE 133
G +RL+ GG GGHNGL+S+ + G ++F R+R+GIGRPPG+ DP F+L+ F AR
Sbjct: 101 GAVRLKSGGGEGGHNGLRSIAQSI-GTKDFLRVRMGIGRPPGRQDPADFVLRPFPTSARA 159
Query: 134 RIDTALQEGVEVLKLLLSKGLTESARHFNTIQKY 167
++ ++ G + ++LL+S+ L E+A+ NT+ +
Sbjct: 160 DVELLVEHGCDAVELLVSRPL-ETAQ--NTVHTW 190
>gi|224368791|ref|YP_002602952.1| protein Pth [Desulfobacterium autotrophicum HRM2]
gi|223691507|gb|ACN14790.1| Pth [Desulfobacterium autotrophicum HRM2]
Length = 193
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 83/145 (57%), Gaps = 1/145 (0%)
Query: 19 KATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRL 78
+++ +G + V++A+PQ YMN SG LAAY+K+ ++V HDD+ L G + +
Sbjct: 48 NSSYTRGVINGLNVVVARPQAYMNRSGPPVQQLAAYFKIQTRNIIVVHDDLDLDFGRMLI 107
Query: 79 RHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTA 138
N GHGGHNG++S++ G +EF R+R+G+GRP G + +L +F +D
Sbjct: 108 AVNRGHGGHNGIRSIIEAL-GTKEFNRVRVGVGRPQGDQEVTGHVLGRFAPSEACDLDRL 166
Query: 139 LQEGVEVLKLLLSKGLTESARHFNT 163
+ GV+ ++ +G++ + +N
Sbjct: 167 ISLGVDACLAIMERGVSAAMNLYNA 191
>gi|268318832|ref|YP_003292488.1| aminoacyl-tRNA aminoacylhydrolase [Lactobacillus johnsonii FI9785]
gi|262397207|emb|CAX66221.1| aminoacyl-tRNA aminoacylhydrolase [Lactobacillus johnsonii FI9785]
Length = 185
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D + E G++++ + + + + V+ +PQT+MN SG+S +A ++K+
Sbjct: 26 LDHYLEKNGLTLDKDKFEGLWTKQKINGEDVIFLEPQTFMNDSGKSIAQVANFFKIKPED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+LV HDDM +P G +R+R NG GGHNG+KS+M G F RL+IGI R P +
Sbjct: 86 ILVIHDDMDMPIGKIRIRANGKSGGHNGIKSIMACL-GTNNFNRLKIGI-RHPKNESVVS 143
Query: 122 FLLQKFNAIARERIDTALQEGVEVL 146
++L FN ++ +DTA + V+
Sbjct: 144 WVLSPFNNDQQKLMDTAFETSENVI 168
>gi|320109098|ref|YP_004184688.1| peptidyl-tRNA hydrolase [Terriglobus saanensis SP1PR4]
gi|319927619|gb|ADV84694.1| peptidyl-tRNA hydrolase [Terriglobus saanensis SP1PR4]
Length = 201
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 90/168 (53%), Gaps = 8/168 (4%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PLN 60
ID AE + ++ +A G+ + LLAKP+TYMN SG S L +L P
Sbjct: 26 IDRIAEDRNAVVSNRRGRALTGKAILAGHECLLAKPETYMNSSGASVAALVQELELDPQK 85
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRP--PGQMD 118
++V +D++ P G LRL+ NG GHNG+KS+ ++ G E+ R+RIG+GRP P +
Sbjct: 86 DLIVLYDELAFPLGELRLKQNGSANGHNGVKSISSSL-GTEEWMRVRIGVGRPNAPDGRE 144
Query: 119 PKA----FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
KA +LLQ ++D L ++ ++ +L G+ ++ +N
Sbjct: 145 VKAGGKDYLLQPMRKADLAQMDEVLDRALQAVEAILKDGIAKAMTQYN 192
>gi|407797378|ref|ZP_11144321.1| peptidyl-tRNA hydrolase [Salimicrobium sp. MJ3]
gi|407018261|gb|EKE30990.1| peptidyl-tRNA hydrolase [Salimicrobium sp. MJ3]
Length = 185
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 84/162 (51%), Gaps = 2/162 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ ++ + F V ++L KPQTYMNLSG + Y+ L
Sbjct: 25 VIDELAKRNNWTVEKKKFNSLFTTEHVRGEKIILLKPQTYMNLSGGAVRSFMDYFGLGEE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV +DD+ L G +RLR GGHGGHNG++ +++ G +EF RLR+GIG+P
Sbjct: 85 DLLVIYDDLDLLPGKIRLRQKGGHGGHNGIRDIIDQL-GTKEFKRLRVGIGKPKSD-SVI 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+L F+ ++ ++ ++ VE + + + E +N
Sbjct: 143 NHVLDTFSKEEKKYMEDSIDRSVEACEAWMERSFDEVMNEYN 184
>gi|407474826|ref|YP_006789226.1| peptidyl-tRNA hydrolase Pth [Clostridium acidurici 9a]
gi|407051334|gb|AFS79379.1| peptidyl-tRNA hydrolase Pth [Clostridium acidurici 9a]
Length = 186
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 95/162 (58%), Gaps = 1/162 (0%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A + +N + K+ +G+ +G+ V+ KPQT+MN SGES ++ ++K+P+
Sbjct: 25 VIDILANRHNVKINKIKFKSVYGEVNLGNEKVMFVKPQTFMNRSGESVLEISNFFKVPVE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V DD+ + G LR+R G G HNG+KS++ + + F R++IG+G+P D
Sbjct: 85 NIIVIVDDIDIGLGALRIRSKGSAGSHNGMKSIIYLLQKDN-FPRVKIGVGKPEVGRDLA 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
F+L +FN + +D AL + + ++ L+ +G+ S +N
Sbjct: 144 DFVLGRFNKEEQIIMDEALNKAADSIECLIKEGIDSSMNKYN 185
>gi|443674200|ref|ZP_21139237.1| Peptidyl-tRNA hydrolase [Rhodococcus sp. AW25M09]
gi|443413212|emb|CCQ17576.1| Peptidyl-tRNA hydrolase [Rhodococcus sp. AW25M09]
Length = 201
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 88/131 (67%), Gaps = 1/131 (0%)
Query: 24 QGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGG 83
Q +G V++AKP+T+MNLSG+ LA ++ + ++V HD++ + G LRL+ GG
Sbjct: 62 QARLGSRSVVIAKPRTFMNLSGQPVAALARFFSIDPANIVVVHDELDIDFGSLRLKLGGG 121
Query: 84 HGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGV 143
GGHNGL+S+ + +++ R+R+G+GRPPG+MDP +F+L+ F+A R+ + ++E
Sbjct: 122 EGGHNGLRSISQHL-STKDYLRVRVGVGRPPGRMDPASFVLKPFSAPERKDLGVVVEEAA 180
Query: 144 EVLKLLLSKGL 154
+ +LLLS GL
Sbjct: 181 DAAELLLSAGL 191
>gi|306835688|ref|ZP_07468694.1| aminoacyl-tRNA hydrolase [Corynebacterium accolens ATCC 49726]
gi|304568406|gb|EFM43965.1| aminoacyl-tRNA hydrolase [Corynebacterium accolens ATCC 49726]
Length = 177
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 82/142 (57%), Gaps = 3/142 (2%)
Query: 11 ISMNTVHCKAT--FGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDD 68
+S +VH K +G + V+ AKP+++MNLSG LA Y+ L ++V HD+
Sbjct: 36 MSSFSVHKKTNTEVAEGMLSGRKVICAKPRSFMNLSGGPIKALAQYFHLTPADIVVVHDE 95
Query: 69 MGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFN 128
+ L G ++LR GG GHNGL+S + G +++ RL IGIGRPPG+MDP +F+L+ ++
Sbjct: 96 LELDFGTVKLRQGGGDHGHNGLRSTTKSL-GTKDYQRLSIGIGRPPGRMDPASFVLKPWS 154
Query: 129 AIARERIDTALQEGVEVLKLLL 150
+ I + V ++ L
Sbjct: 155 KQEKVEIPILCADAVAEIRSAL 176
>gi|313884481|ref|ZP_07818242.1| aminoacyl-tRNA hydrolase [Eremococcus coleocola ACS-139-V-Col8]
gi|312620265|gb|EFR31693.1| aminoacyl-tRNA hydrolase [Eremococcus coleocola ACS-139-V-Col8]
Length = 186
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 88/163 (53%), Gaps = 2/163 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID F + G++M +A + VLL KP TYMN SGE+ P+ +YY + +
Sbjct: 25 VIDQFMQDHGLAMTKQKFRADYEIWHSPKEKVLLLKPFTYMNASGEAVLPIMSYYGIGME 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ L G +RLR G GGHNG+KS++ + G+ +F R+R+GIGRP
Sbjct: 85 DLVVVYDDLDLDPGRIRLRQKGSSGGHNGMKSII-SILGSDQFNRIRVGIGRPHPGWKVV 143
Query: 121 AFLLQKFNAIARERIDTALQEGVEVL-KLLLSKGLTESARHFN 162
+L F+ + ID A+ + L L ++ ++ FN
Sbjct: 144 DHVLAPFDKTEQVLIDQAVGQAASALTDYLDNEDFIQTMNKFN 186
>gi|303234870|ref|ZP_07321495.1| aminoacyl-tRNA hydrolase [Finegoldia magna BVS033A4]
gi|302493988|gb|EFL53769.1| aminoacyl-tRNA hydrolase [Finegoldia magna BVS033A4]
Length = 189
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 92/162 (56%), Gaps = 2/162 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ I +N + K+ G+GF+G+ V+L KP TYMN SG++ YY L
Sbjct: 25 VIDDLAKKLNIKVNKLKFKSLIGEGFIGNEKVILMKPSTYMNDSGKAILDCFNYYNLSAE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V DD+ +P G +R++ G G HNGLKS++ + +++FAR+++ +G+ + D K
Sbjct: 85 NLIVICDDIDIPFGTIRIKKKGSAGTHNGLKSIIYLIQ-SQDFARIKVSVGQND-KYDLK 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
F+L +F+ E ++ + + ++ + + + +FN
Sbjct: 143 DFVLSQFSKKEFEVLEKEIDMSSDAAIKIVEENVDYAMNNFN 184
>gi|421512583|ref|ZP_15959386.1| Peptidyl-tRNA hydrolase [Enterococcus faecalis ATCC 29212]
gi|401674271|gb|EJS80626.1| Peptidyl-tRNA hydrolase [Enterococcus faecalis ATCC 29212]
Length = 188
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 86/163 (52%), Gaps = 4/163 (2%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D A Q +S N + +A + F+G VLL KP T+MN SG S GPL Y+ +
Sbjct: 26 LDEIAYRQNVSFNNSNFEADIAEFFIGTEKVLLVKPLTFMNESGRSVGPLLTYFGVDEED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DD+ L G +RLR G GGHNG+KS++ + N F R++IGIGRP
Sbjct: 86 LIVIYDDLDLEVGKIRLRQKGSAGGHNGIKSLIAHLVTNV-FPRIKIGIGRPSKNDTVIH 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT--ESARHFN 162
+L F E + A+++ + L +G T E+ FN
Sbjct: 145 HVLSTFPKETHEEMLLAVKKAADA-ALYACEGHTFVETMNQFN 186
>gi|425439499|ref|ZP_18819821.1| Peptidyl-tRNA hydrolase [Microcystis aeruginosa PCC 9717]
gi|389720261|emb|CCH96014.1| Peptidyl-tRNA hydrolase [Microcystis aeruginosa PCC 9717]
Length = 208
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 93/167 (55%), Gaps = 12/167 (7%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFV--GDAP----VLLAKPQTYMNLSGESTGPLAAYY 55
+D+ A G+S F QGF+ GD+P + L KPQTYMN SG+S + +Y
Sbjct: 37 VDSLARDWGLSWQE---NKRF-QGFIAEGDSPLPGKIRLLKPQTYMNRSGQSVRAVLDWY 92
Query: 56 KLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPG 115
KL +LV +DDM LP G LR+R +G GGHNG+KS++ + G FARLRIGIG+
Sbjct: 93 KLEPESILVIYDDMDLPLGRLRIRLSGSAGGHNGIKSMIAHV-GTESFARLRIGIGK-SS 150
Query: 116 QMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+ + +L +F E I L + ++L L +GL ++ +N
Sbjct: 151 EKATISHVLGRFTPQENEVILKVLDLSRKAIELGLKQGLQKAMSLYN 197
>gi|227487498|ref|ZP_03917814.1| peptidyl-tRNA hydrolase [Corynebacterium glucuronolyticum ATCC
51867]
gi|227541226|ref|ZP_03971275.1| peptidyl-tRNA hydrolase [Corynebacterium glucuronolyticum ATCC
51866]
gi|227092480|gb|EEI27792.1| peptidyl-tRNA hydrolase [Corynebacterium glucuronolyticum ATCC
51867]
gi|227182999|gb|EEI63971.1| peptidyl-tRNA hydrolase [Corynebacterium glucuronolyticum ATCC
51866]
Length = 168
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 73/134 (54%), Gaps = 10/134 (7%)
Query: 30 APVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 89
A V KPQTYMN SGE+ PLA YK+P R++V HD++ LP G +++R G GHNG
Sbjct: 43 AGVKFCKPQTYMNRSGEAVAPLARRYKVPPERIIVVHDELDLPEGRIKVRLGGNENGHNG 102
Query: 90 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 149
LKSV G R++ R+R+GIGRPP ++L IA E ++ +
Sbjct: 103 LKSVSECL-GTRDYIRVRVGIGRPPAGTGVADWVLGTGGPIA---------GAPEAVRAI 152
Query: 150 LSKGLTESARHFNT 163
L +G + H N
Sbjct: 153 LEEGFATAQSHINA 166
>gi|229546914|ref|ZP_04435639.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX1322]
gi|255971756|ref|ZP_05422342.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T1]
gi|257421546|ref|ZP_05598536.1| peptidyl-tRNA hydrolase [Enterococcus faecalis X98]
gi|312952656|ref|ZP_07771520.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0102]
gi|384517336|ref|YP_005704641.1| peptidyl-tRNA hydrolase [Enterococcus faecalis 62]
gi|422691669|ref|ZP_16749698.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0031]
gi|422695395|ref|ZP_16753381.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX4244]
gi|422706365|ref|ZP_16764066.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0043]
gi|422726416|ref|ZP_16782863.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0312]
gi|229307842|gb|EEN73829.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX1322]
gi|255962774|gb|EET95250.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T1]
gi|257163370|gb|EEU93330.1| peptidyl-tRNA hydrolase [Enterococcus faecalis X98]
gi|310629444|gb|EFQ12727.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0102]
gi|315147121|gb|EFT91137.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX4244]
gi|315153560|gb|EFT97576.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0031]
gi|315156260|gb|EFU00277.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0043]
gi|315158595|gb|EFU02612.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0312]
gi|323479469|gb|ADX78908.1| peptidyl-tRNA hydrolase [Enterococcus faecalis 62]
Length = 188
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 68/112 (60%), Gaps = 1/112 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D A Q +S N + +A + F+G VLL KP T+MN SG S GPL Y+ +
Sbjct: 26 LDEIAYRQNVSFNNSNFEADIAEFFIGTEKVLLVKPLTFMNESGRSVGPLLTYFGVDEED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRP 113
++V +DD+ L G +RLR G GGHNG+KS++ + G F R++IGIGRP
Sbjct: 86 LIVIYDDLDLEVGKIRLRQKGSAGGHNGIKSLIAHL-GTNVFPRIKIGIGRP 136
>gi|227888874|ref|ZP_04006679.1| peptidyl-tRNA hydrolase [Lactobacillus johnsonii ATCC 33200]
gi|227850567|gb|EEJ60653.1| peptidyl-tRNA hydrolase [Lactobacillus johnsonii ATCC 33200]
Length = 185
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D + E G++++ + + + + V+ +PQT+MN SG+S +A ++K+
Sbjct: 26 LDHYLEKNGLTLDKDKFEGLWTKQKINGEDVIFLEPQTFMNDSGKSIAQVANFFKIKPED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+LV HDDM +P G +R+R NG GGHNG+KS+M G F RL+IGI R P +
Sbjct: 86 ILVIHDDMDMPIGKIRIRANGKSGGHNGIKSIMACL-GTNNFNRLKIGI-RHPENESVVS 143
Query: 122 FLLQKFNAIARERIDTALQEGVEVL 146
++L FN ++ +DTA + V+
Sbjct: 144 WVLSPFNNDQQKLMDTAFETSENVI 168
>gi|282882227|ref|ZP_06290866.1| aminoacyl-tRNA hydrolase [Peptoniphilus lacrimalis 315-B]
gi|281297992|gb|EFA90449.1| aminoacyl-tRNA hydrolase [Peptoniphilus lacrimalis 315-B]
Length = 192
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 88/161 (54%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D AE ++MN + K G+ +G ++L KPQT+MN SGES +YK+ +
Sbjct: 29 VDKIAEKLSVNMNKIKFKGLLGETRIGQNRLILLKPQTFMNNSGESIRMCLDFYKVDVKN 88
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V DD+ + G L+++ G G HNGLKS++N+ ++ F R+++GIG+ D
Sbjct: 89 LIVIVDDIDINFGQLKIKKEGSAGTHNGLKSIVNHL-SSKSFPRIKVGIGQKKEGEDLAN 147
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
F+L F++ + ID A + ++ KG+ + +N
Sbjct: 148 FVLSNFSSNDAKHIDKATDAARDAAIDIVEKGIEYTMNAYN 188
>gi|167772370|ref|ZP_02444423.1| hypothetical protein ANACOL_03747 [Anaerotruncus colihominis DSM
17241]
gi|167665473|gb|EDS09603.1| aminoacyl-tRNA hydrolase [Anaerotruncus colihominis DSM 17241]
Length = 203
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 85/163 (52%), Gaps = 2/163 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
++ A G+ ++ + K+ G VLL KP T+MN SGE+ +YK+P R
Sbjct: 42 VERIAGKCGVKIDRLKFKSLCADTTFGGQRVLLMKPSTFMNCSGEAVREAMQFYKIPAER 101
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQ-MDPK 120
VLV DD+ L G LR+R G GGHNG+K+ M G F R++IG+G+ P D
Sbjct: 102 VLVLFDDVSLDPGRLRIRRQGSDGGHNGIKN-MIYLTGKDTFPRIKIGVGKKPHPGYDLA 160
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
A++L KF + +D A + E +L++ + E+ +N
Sbjct: 161 AWVLGKFPKELADTMDKAYERAAEAAQLIIEGKIDEAMNRYNA 203
>gi|183984443|ref|YP_001852734.1| peptidyl-tRNA hydrolase [Mycobacterium marinum M]
gi|238689227|sp|B2HDJ5.1|PTH_MYCMM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|183177769|gb|ACC42879.1| peptidyl-tRNA hydrolase Pth [Mycobacterium marinum M]
Length = 191
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 80/123 (65%), Gaps = 1/123 (0%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+LAKP+ YMN SG PLA +Y +P ++V HD++ L G +RL+ GG GGHNGL+
Sbjct: 60 VVLAKPRCYMNESGRQVAPLAKFYSVPPADLIVIHDELDLDFGRIRLKFGGGEGGHNGLR 119
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
SV G ++F R+RIGIGRPPG+ DP F+L+ F++ R + T ++ + +LL+
Sbjct: 120 SVAAAL-GTKDFQRVRIGIGRPPGRKDPATFVLENFSSPERPEVPTICEQAADATELLVE 178
Query: 152 KGL 154
GL
Sbjct: 179 IGL 181
>gi|82701725|ref|YP_411291.1| peptidyl-tRNA hydrolase [Nitrosospira multiformis ATCC 25196]
gi|119390969|sp|Q2YBH2.1|PTH_NITMU RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|82409790|gb|ABB73899.1| peptidyl-tRNA hydrolase [Nitrosospira multiformis ATCC 25196]
Length = 191
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 77/130 (59%), Gaps = 4/130 (3%)
Query: 20 ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 79
A GQG ++ L PQTYMN SG + L +Y++ ++LV HD++ LP GV RL+
Sbjct: 48 ARIGQG---ESESWLLNPQTYMNASGRAVAALCRFYRIQPEQMLVVHDELDLPPGVSRLK 104
Query: 80 HNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTAL 139
+GG GGHNGLK ++ + G REF RLRIGIG P + ++LQ IDTA+
Sbjct: 105 LDGGLGGHNGLKDIVAHL-GTREFWRLRIGIGHPGEKHAVVNYVLQPPRKEEAALIDTAI 163
Query: 140 QEGVEVLKLL 149
+ +EV L+
Sbjct: 164 NDSLEVWPLI 173
>gi|434393133|ref|YP_007128080.1| peptidyl-tRNA hydrolase [Gloeocapsa sp. PCC 7428]
gi|428264974|gb|AFZ30920.1| peptidyl-tRNA hydrolase [Gloeocapsa sp. PCC 7428]
Length = 212
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 95/169 (56%), Gaps = 7/169 (4%)
Query: 2 IDAFAESQGISMN-TVHCKATFGQGFVGD-APVLLAKPQTYMNLSGESTGPLAAYYKLPL 59
+DA A S + ++ + FG+G + + L KP TYMN SG++ + ++KLP
Sbjct: 37 VDALARSWKMPLSENRKFQGEFGEGVSPNREKIRLLKPLTYMNNSGQAIRAVVDWFKLPP 96
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
+LV +DDM LP G +RLR +G GGHNG+KS + + G + F RLRIGIG+P +
Sbjct: 97 ESILVIYDDMDLPVGKIRLRLSGSAGGHNGMKSAIAHL-GTQNFPRLRIGIGKPEQAVSN 155
Query: 120 K----AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTI 164
+ +L +F+ + + L V+ ++L L +G+ ++ +NT+
Sbjct: 156 NGKTISHVLGRFSPTENQVVTKLLPLVVDCVELCLKQGVEKAMNRYNTV 204
>gi|408501196|ref|YP_006865115.1| peptidyl-tRNA hydrolase [Bifidobacterium asteroides PRL2011]
gi|408466020|gb|AFU71549.1| peptidyl-tRNA hydrolase [Bifidobacterium asteroides PRL2011]
Length = 199
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 93/168 (55%), Gaps = 9/168 (5%)
Query: 3 DAFAESQGISMNTVHCKATFGQGFVG----DAPVLLAKPQTYMNLSGESTGPLAAYYKLP 58
D AE +++ A G+G + P LAKP T+MN SG++ + +YY +P
Sbjct: 31 DLLAERWSVNLRDHKGLAQLGRGTLDLEGRRIPFFLAKPLTFMNDSGDALASICSYYHIP 90
Query: 59 LNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGR----PP 114
+ RV+V HDDM L G ++++ G GGHNG++S+ + G+ +AR+R+G+G P
Sbjct: 91 VGRVVVIHDDMDLEFGRIKVKAGGSSGGHNGIRSIDRSL-GSNAYARVRMGVGHARRGPD 149
Query: 115 GQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L F R+R+ L +G + +++++KGL+++ FN
Sbjct: 150 AHRRTVDWVLGTFVGDQRKRLPEFLADGADAAEIVITKGLSQAQELFN 197
>gi|282853610|ref|ZP_06262947.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes J139]
gi|386071074|ref|YP_005985970.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes ATCC 11828]
gi|422458336|ref|ZP_16534990.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL050PA2]
gi|422465323|ref|ZP_16541926.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL110PA4]
gi|282583063|gb|EFB88443.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes J139]
gi|315092573|gb|EFT64549.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL110PA4]
gi|315104559|gb|EFT76535.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL050PA2]
gi|353455440|gb|AER05959.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes ATCC 11828]
Length = 200
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 83/146 (56%), Gaps = 1/146 (0%)
Query: 18 CKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLR 77
A G V V+L + +TYMN SG + +A++ + + ++V HD++ L G LR
Sbjct: 56 SSAGLGVPAVDAQTVILMRSRTYMNESGIAVSKVASFAGMTPDHLIVVHDEIDLDPGRLR 115
Query: 78 LRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDT 137
L+ GG GHNGLKSV + R +F R+R+G+GRPPG+ DP ++L + R +D
Sbjct: 116 LKKGGGDNGHNGLKSVRAHMRTG-DFIRVRVGVGRPPGRQDPADWVLARVPVRQRTDMDV 174
Query: 138 ALQEGVEVLKLLLSKGLTESARHFNT 163
+ + ++ ++ +GLT + FN+
Sbjct: 175 QVALAADAVETIIKQGLTVAQNRFNS 200
>gi|406830799|ref|ZP_11090393.1| peptidyl-tRNA hydrolase [Schlesneria paludicola DSM 18645]
Length = 200
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 75/132 (56%), Gaps = 1/132 (0%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
VLLA PQT+MN+SG S + ++++ L V+V DD+ L G LRLR +G GG GL
Sbjct: 56 VLLAAPQTFMNISGRSVQQIVKFFQISLGDVMVVCDDLNLKVGQLRLRGSGSAGGQKGLL 115
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S++ G+ RLRIGIGRPP +D F+L KF +ID A++ ++L +
Sbjct: 116 SIL-QVCGSDAVPRLRIGIGRPPDSVDAANFVLSKFRKDEHPKIDQAIRGAASGIELWIK 174
Query: 152 KGLTESARHFNT 163
G++ + N
Sbjct: 175 DGISAAMNVVNV 186
>gi|383786542|ref|YP_005471111.1| peptidyl-tRNA hydrolase [Fervidobacterium pennivorans DSM 9078]
gi|383109389|gb|AFG34992.1| peptidyl-tRNA hydrolase [Fervidobacterium pennivorans DSM 9078]
Length = 177
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 84/134 (62%), Gaps = 8/134 (5%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V L KP TYMNLSGE + LP + ++V +DD+ LP G +R+R +G GGHNG+K
Sbjct: 50 VKLVKPLTYMNLSGE------VFKYLPHDDIIVVYDDLDLPLGRIRIRKDGSAGGHNGIK 103
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+++ ++F R+RIGIG P ++D ++L +F+ E++ + ++ ++ ++S
Sbjct: 104 SIISYI--GQDFPRIRIGIGPKPKEIDAANYVLSEFSPEEFEKLRKVIDLTLQAIETIVS 161
Query: 152 KGLTESARHFNTIQ 165
+G+ ++ +N+IQ
Sbjct: 162 EGIDKAMNKYNSIQ 175
>gi|313889528|ref|ZP_07823174.1| aminoacyl-tRNA hydrolase [Streptococcus pseudoporcinus SPIN 20026]
gi|313122140|gb|EFR45233.1| aminoacyl-tRNA hydrolase [Streptococcus pseudoporcinus SPIN 20026]
Length = 189
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 87/163 (53%), Gaps = 3/163 (1%)
Query: 2 IDAFAESQGISMN-TVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+D A++ +S + KA G F+ V KP T+MN SG + L YY + ++
Sbjct: 27 VDQLAKNFDVSFTEDKNFKALIGWAFINQEKVYFVKPTTFMNNSGIAVRALLTYYNIAIS 86
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ + G LR R G GGHNG+KS++ N G++EF R++IGIGRP M
Sbjct: 87 DLIVIYDDLDMEVGKLRFRQKGSAGGHNGIKSIIANI-GSQEFDRVKIGIGRPHSGMTVI 145
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE-SARHFN 162
+L KF RI L++ V + L +G E + + FN
Sbjct: 146 NHVLGKFEKEDGIRIALTLEKVVMAVNFYLQEGNFELTMQKFN 188
>gi|386618888|ref|YP_006138468.1| Peptidyl-tRNA hydrolase [Escherichia coli NA114]
gi|387829233|ref|YP_003349170.1| peptidyl-tRNA hydrolase [Escherichia coli SE15]
gi|432421473|ref|ZP_19664023.1| peptidyl-tRNA hydrolase [Escherichia coli KTE178]
gi|432499677|ref|ZP_19741440.1| peptidyl-tRNA hydrolase [Escherichia coli KTE216]
gi|432558335|ref|ZP_19795021.1| peptidyl-tRNA hydrolase [Escherichia coli KTE49]
gi|432694070|ref|ZP_19929279.1| peptidyl-tRNA hydrolase [Escherichia coli KTE162]
gi|432710232|ref|ZP_19945296.1| peptidyl-tRNA hydrolase [Escherichia coli KTE6]
gi|432918533|ref|ZP_20122874.1| peptidyl-tRNA hydrolase [Escherichia coli KTE173]
gi|432926308|ref|ZP_20128089.1| peptidyl-tRNA hydrolase [Escherichia coli KTE175]
gi|432980724|ref|ZP_20169502.1| peptidyl-tRNA hydrolase [Escherichia coli KTE211]
gi|433096091|ref|ZP_20282299.1| peptidyl-tRNA hydrolase [Escherichia coli KTE139]
gi|433105354|ref|ZP_20291366.1| peptidyl-tRNA hydrolase [Escherichia coli KTE148]
gi|281178390|dbj|BAI54720.1| peptidyl-tRNA hydrolase [Escherichia coli SE15]
gi|333969389|gb|AEG36194.1| Peptidyl-tRNA hydrolase [Escherichia coli NA114]
gi|430945727|gb|ELC65793.1| peptidyl-tRNA hydrolase [Escherichia coli KTE178]
gi|431030375|gb|ELD43389.1| peptidyl-tRNA hydrolase [Escherichia coli KTE216]
gi|431093186|gb|ELD98856.1| peptidyl-tRNA hydrolase [Escherichia coli KTE49]
gi|431235428|gb|ELF30679.1| peptidyl-tRNA hydrolase [Escherichia coli KTE162]
gi|431250801|gb|ELF44860.1| peptidyl-tRNA hydrolase [Escherichia coli KTE6]
gi|431445665|gb|ELH26588.1| peptidyl-tRNA hydrolase [Escherichia coli KTE173]
gi|431446943|gb|ELH27686.1| peptidyl-tRNA hydrolase [Escherichia coli KTE175]
gi|431493619|gb|ELH73213.1| peptidyl-tRNA hydrolase [Escherichia coli KTE211]
gi|431618490|gb|ELI87463.1| peptidyl-tRNA hydrolase [Escherichia coli KTE139]
gi|431631916|gb|ELJ00221.1| peptidyl-tRNA hydrolase [Escherichia coli KTE148]
Length = 194
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 79/139 (56%)
Query: 27 VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGG 86
+G V L P T+MNLSG++ +A+++++ + +LV HD++ LP GV + + GHGG
Sbjct: 54 LGGEDVRLLVPTTFMNLSGKAVAAMASFFRINPDEILVAHDELDLPPGVAKFKLGSGHGG 113
Query: 87 HNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 146
HNGLK +++ N F RLRIGIG P + F+L K ++ ID A+ E
Sbjct: 114 HNGLKDIISKLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCT 173
Query: 147 KLLLSKGLTESARHFNTIQ 165
++ + GLT++ + +
Sbjct: 174 EMWFTDGLTKATNRLHAFK 192
>gi|32476152|ref|NP_869146.1| peptidyl-tRNA hydrolase [Rhodopirellula baltica SH 1]
gi|46576732|sp|Q7UKV0.1|PTH_RHOBA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|32446696|emb|CAD76532.1| peptidyl-tRNA hydrolase [Rhodopirellula baltica SH 1]
Length = 190
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 75/131 (57%), Gaps = 1/131 (0%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
VL+ PQTYMN SG+S +YKL +LV DD+ L G +RLR +G GG GL
Sbjct: 56 VLVLCPQTYMNASGQSVRKAMDFYKLSPEDILVICDDLNLETGRVRLRRSGSAGGQKGLV 115
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
++ + G+ ++ARL+IGIGRPP + ++L KF+ E ++ A+ + ++
Sbjct: 116 DIIRHL-GSEQWARLKIGIGRPPAKWQVSDYVLGKFDKTELEEMEHAIVHSCDATACWVA 174
Query: 152 KGLTESARHFN 162
G+TE+ +N
Sbjct: 175 DGVTEAMNRYN 185
>gi|408790657|ref|ZP_11202272.1| Peptidyl-tRNA hydrolase [Lactobacillus florum 2F]
gi|408519998|gb|EKK20102.1| Peptidyl-tRNA hydrolase [Lactobacillus florum 2F]
Length = 185
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 73/115 (63%), Gaps = 1/115 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
++ FA++ I +N + A FG G + VLL +P TYMN SG++ PL YYKL L+
Sbjct: 26 LEDFAKAHQIELNQHNQNAQFGSGLLEGEKVLLVEPLTYMNESGQAVRPLLDYYKLSLDD 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQ 116
++V +DDM L G +RLR++G GGHNG+KS++ + G +F R++IG P Q
Sbjct: 86 LVVVYDDMDLHVGRIRLRNHGSSGGHNGIKSLIAHL-GTNQFNRIKIGTDHPQRQ 139
>gi|347757712|ref|YP_004865274.1| peptidyl-tRNA hydrolase [Micavibrio aeruginosavorus ARL-13]
gi|347590230|gb|AEP09272.1| peptidyl-tRNA hydrolase [Micavibrio aeruginosavorus ARL-13]
Length = 196
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 85/150 (56%), Gaps = 1/150 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
IDA A+ G + +G +G V L KPQTYMN SG + G A ++K+ NR
Sbjct: 26 IDAIADKHGFPDFRTKFQGLLTEGRIGGEKVALLKPQTYMNESGMAVGAAAKFFKVTPNR 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++VFHD++ L LR++ GGH GHNGL+S+ ++ G ++ R+R+GIG P +
Sbjct: 86 IVVFHDELDLAASKLRIKVGGGHAGHNGLRSIDSHL-GRADYMRVRLGIGHPGDKDRVHG 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLS 151
+L F+ ++ +D ++ + + L+LS
Sbjct: 145 HVLGDFSKEEQKWVDAMMKSIPDHVGLILS 174
>gi|124268411|ref|YP_001022415.1| peptidyl-tRNA hydrolase [Methylibium petroleiphilum PM1]
gi|166199361|sp|A2SKU1.1|PTH_METPP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|124261186|gb|ABM96180.1| peptidyl-tRNA hydrolase [Methylibium petroleiphilum PM1]
Length = 232
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 79/133 (59%), Gaps = 1/133 (0%)
Query: 31 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 90
PV L +PQTYMN+SG+S LA ++K+ +LV HD++ LP G ++L+ GGH GHNGL
Sbjct: 57 PVWLLEPQTYMNVSGKSVAALARFFKIAPEEILVAHDELDLPPGEMKLKQGGGHAGHNGL 116
Query: 91 KSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 150
+ + G+ ++ RLR+GIG P + + ++L K RE ID + + + LL
Sbjct: 117 RDIHAQL-GSTDYWRLRLGIGHPGVKAEVANYVLGKPMREHREAIDACIVRSLTAVDALL 175
Query: 151 SKGLTESARHFNT 163
S ++++ +T
Sbjct: 176 SGDMSKATLRLHT 188
>gi|425468460|ref|ZP_18847478.1| Peptidyl-tRNA hydrolase [Microcystis aeruginosa PCC 9701]
gi|389884881|emb|CCI34861.1| Peptidyl-tRNA hydrolase [Microcystis aeruginosa PCC 9701]
Length = 208
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 93/167 (55%), Gaps = 12/167 (7%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFV--GDAP----VLLAKPQTYMNLSGESTGPLAAYY 55
+DA A G+S F QGF+ GD+P + L KPQTYMN SG+S + +Y
Sbjct: 37 VDALARDWGLSWQE---NKRF-QGFIAEGDSPPWGKIRLLKPQTYMNRSGQSVRAVLDWY 92
Query: 56 KLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPG 115
KL +LV +DDM LP G LR+R +G GGHNG+KS++ + G FARLRIGIG+
Sbjct: 93 KLEPESILVIYDDMDLPLGRLRIRLSGSAGGHNGIKSMIAHV-GTESFARLRIGIGK-SS 150
Query: 116 QMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+ + +L +F + I L + ++L L +GL ++ +N
Sbjct: 151 EKATISHVLGRFTPQENQVILKVLDLSRKAIELGLKQGLQKAMSLYN 197
>gi|162446906|ref|YP_001620038.1| peptidyl-tRNA hydrolase [Acholeplasma laidlawii PG-8A]
gi|189038277|sp|A9NE82.1|PTH_ACHLI RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|161985013|gb|ABX80662.1| peptidyl-tRNA hydrolase [Acholeplasma laidlawii PG-8A]
Length = 191
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 68/112 (60%), Gaps = 2/112 (1%)
Query: 18 CKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLR 77
+A + + + V++AKP TYMNLSG++ L +YK+ + +LV DD LP G +R
Sbjct: 43 LQAAYTKTKIEGEDVIIAKPLTYMNLSGDAVTKLMNFYKIDVEDILVILDDTALPLGKIR 102
Query: 78 LRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNA 129
+R G HGG NGLK ++N G ++F RLRIGIG MD ++L KF+
Sbjct: 103 IRQTGSHGGQNGLKDIINKL-GTKDFKRLRIGIGE-HAHMDKVDYVLGKFST 152
>gi|347534134|ref|YP_004840804.1| peptidyl-tRNA hydrolase [Lactobacillus sanfranciscensis TMW 1.1304]
gi|345504190|gb|AEN98872.1| Peptidyl-tRNA hydrolase [Lactobacillus sanfranciscensis TMW 1.1304]
Length = 185
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 83/150 (55%), Gaps = 2/150 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
++ FA I +N A FG G V V++ +P TYMN SG + PL +YKL L+
Sbjct: 26 VEKFAAEHDIEINKQKMDAMFGTGMVDGEKVMVVEPTTYMNESGRAVHPLMQFYKLDLDD 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
V++ +DDM L G +RLR++G GGHNG+KS++ + G +F R++IG P Q
Sbjct: 86 VVIVYDDMDLHVGRIRLRNHGSAGGHNGIKSLIAHL-GTDQFNRIKIGTDHPKRQ-SVVD 143
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLS 151
++L KF + + A + V+ L ++
Sbjct: 144 YVLGKFTLEQQGPLSEAFDKTVKALDEWVA 173
>gi|284033575|ref|YP_003383506.1| peptidyl-tRNA hydrolase [Kribbella flavida DSM 17836]
gi|283812868|gb|ADB34707.1| peptidyl-tRNA hydrolase [Kribbella flavida DSM 17836]
Length = 191
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 83/137 (60%), Gaps = 1/137 (0%)
Query: 27 VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGG 86
+G A +LAKP++YMN SG L ++K+ +++ HD++ L LR++ GG G
Sbjct: 56 IGGARTVLAKPRSYMNESGGPVAGLLRFFKVEPAQLIAVHDELDLDFATLRVKFGGGDNG 115
Query: 87 HNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 146
HNGL+S+ + G ++ R+R G+GRPPG+ +P F+L +F+A R+ + AL + +
Sbjct: 116 HNGLRSIRKSV-GTGDYHRVRFGVGRPPGRQNPADFVLNEFSAAERKDLPFALDRTADAV 174
Query: 147 KLLLSKGLTESARHFNT 163
+ L++ GL + +N+
Sbjct: 175 ESLIADGLEVTQGKYNS 191
>gi|139439413|ref|ZP_01772854.1| Hypothetical protein COLAER_01874 [Collinsella aerofaciens ATCC
25986]
gi|133775192|gb|EBA39012.1| aminoacyl-tRNA hydrolase [Collinsella aerofaciens ATCC 25986]
Length = 209
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 76/135 (56%), Gaps = 1/135 (0%)
Query: 28 GDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGH 87
G ++L KPQ+YMN SG L YK+ +LV HD++ +P G +R++ GGH GH
Sbjct: 67 GKRQIVLVKPQSYMNTSGGPISKLCREYKIKAEELLVIHDELDIPAGDVRVKVGGGHAGH 126
Query: 88 NGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 147
NGL+S+++ G+R+F+R+R GIG PPG+M ++L++ A E +
Sbjct: 127 NGLRSIIDKM-GSRDFSRIRTGIGNPPGKMAVADYVLKQLRAREAEDFQDTCARAADAAG 185
Query: 148 LLLSKGLTESARHFN 162
L + G+ + H N
Sbjct: 186 LAIVHGVVYARDHVN 200
>gi|422014442|ref|ZP_16361053.1| peptidyl-tRNA hydrolase [Providencia burhodogranariea DSM 19968]
gi|414100886|gb|EKT62495.1| peptidyl-tRNA hydrolase [Providencia burhodogranariea DSM 19968]
Length = 196
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 81/134 (60%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V L P T+MNLSG+S +A +Y++ + +LV HD++ LP GV +++ G +GGHNGLK
Sbjct: 60 VRLLVPTTFMNLSGKSVLAIANFYRINPDEILVAHDELDLPPGVAKMKLGGSNGGHNGLK 119
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
+ + F N F RLRIGIG P + F+L K + ++ ID A+ E + +LL+
Sbjct: 120 DIQSKFSNNPNFYRLRIGIGHPGDKNKVVGFVLGKPPSSEQKLIDEAIDESLRCTDILLN 179
Query: 152 KGLTESARHFNTIQ 165
+G+ ++ ++ +
Sbjct: 180 EGMDKAINRLHSFK 193
>gi|384515282|ref|YP_005710374.1| Peptidyl-tRNA hydrolase [Corynebacterium ulcerans 809]
gi|397653607|ref|YP_006494290.1| peptidyl-tRNA hydrolase [Corynebacterium ulcerans 0102]
gi|334696483|gb|AEG81280.1| Peptidyl-tRNA hydrolase [Corynebacterium ulcerans 809]
gi|393402563|dbj|BAM27055.1| peptidyl-tRNA hydrolase [Corynebacterium ulcerans 0102]
Length = 186
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 81/127 (63%), Gaps = 1/127 (0%)
Query: 27 VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGG 86
+G V+LA P+++MNLSG +A ++ +P+++V+V DD+ L ++ + GG G
Sbjct: 58 IGTTKVILATPRSFMNLSGGPVRSIANFFNVPVSQVIVLFDDLELGFSEVKAKRGGGDHG 117
Query: 87 HNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 146
HNGL+S+ + G +++ R+ IGIGRPPG+M+PKAF+L+ F+ I A + + +
Sbjct: 118 HNGLRSITQSL-GTKDYIRVGIGIGRPPGRMEPKAFVLKPFSKKELVEIPIACADAADEV 176
Query: 147 KLLLSKG 153
+ +++ G
Sbjct: 177 ERIITNG 183
>gi|310829354|ref|YP_003961711.1| peptidyl-tRNA hydrolase [Eubacterium limosum KIST612]
gi|308741088|gb|ADO38748.1| peptidyl-tRNA hydrolase [Eubacterium limosum KIST612]
Length = 203
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 84/161 (52%), Gaps = 1/161 (0%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D A + + + + G F V+L KP TYMN SG L +YY +PL
Sbjct: 26 VDYIAGQKNVQITKDEHEGLTGVYFENGEKVMLVKPMTYMNNSGLCVEELVSYYDVPLEN 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
LV +DD+ L G +R+R G G HNG++S++ + ++ F R+RIGIG+ P Q D
Sbjct: 86 TLVIYDDIDLDPGKIRIRKKGSAGTHNGMRSIIYQLQ-DQNFPRIRIGIGKKPPQWDLAN 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
++L KF E + A+++ E ++ +++ + + N
Sbjct: 145 YVLSKFTPDETEVMREAVKKTAEAVEFYINEDIDFAMNRLN 185
>gi|82544342|ref|YP_408289.1| peptidyl-tRNA hydrolase [Shigella boydii Sb227]
gi|119391006|sp|Q31ZP7.1|PTH_SHIBS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|81245753|gb|ABB66461.1| peptidyl-tRNA hydrolase [Shigella boydii Sb227]
Length = 194
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 79/139 (56%)
Query: 27 VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGG 86
+G V L P T+MNLSG++ +A+++++ + +LV HD++ LP GV + + G HGG
Sbjct: 54 LGGEDVRLLVPTTFMNLSGKAVAAMASFFRINPDEILVAHDELDLPPGVAKFKLAGAHGG 113
Query: 87 HNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 146
HNGLK +++ N F RLRIGIG P + F+L K ++ ID A+ E
Sbjct: 114 HNGLKDIISKLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCT 173
Query: 147 KLLLSKGLTESARHFNTIQ 165
++ + GLT++ + +
Sbjct: 174 EMWFTDGLTKATNRLHAFK 192
>gi|297626905|ref|YP_003688668.1| peptidyl-tRNA hydrolase [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
gi|296922670|emb|CBL57247.1| Peptidyl-tRNA hydrolase (aminoacyl-tRNA hydrolase)
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
Length = 197
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 91/161 (56%), Gaps = 4/161 (2%)
Query: 5 FAESQGISMNTVHCKATFGQGFVGDAP--VLLAKPQTYMNLSGESTGPLAAYYKLPLNRV 62
F+ S+G+ T + QG G AP ++LAKP+T+MN SG + L+ + + + +
Sbjct: 39 FSASRGMHAETASTRIGP-QGIGGPAPEKLVLAKPRTFMNESGRAVRKLSDFLDIEPDHI 97
Query: 63 LVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAF 122
+V HD++ L G LR++ GG GHNGLKS+ + G +F R+R+GIGRP G +
Sbjct: 98 IVVHDELDLDPGRLRIKLGGGDNGHNGLKSIRAHL-GTGDFYRVRLGIGRPQGHRAGADY 156
Query: 123 LLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 163
+L +F+ RE + + +G E + L++ GL + FN
Sbjct: 157 VLGRFSKAEREELAIEVDDGAEAVISLINAGLGPTQNRFNN 197
>gi|254447715|ref|ZP_05061180.1| peptidyl-tRNA hydrolase [gamma proteobacterium HTCC5015]
gi|198262495|gb|EDY86775.1| peptidyl-tRNA hydrolase [gamma proteobacterium HTCC5015]
Length = 197
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 77/126 (61%), Gaps = 2/126 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
+ L KP T+MN SG S +A +YK+P+ +LV HD++ L GV RL+ GGHGGHNGL+
Sbjct: 67 IRLLKPTTFMNHSGRSISAMARFYKIPVEHILVAHDELDLDPGVARLKRAGGHGGHNGLR 126
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
+ ++F RLRIGIG P + D ++L+ + R++I +L + +VL LLS
Sbjct: 127 DTIAAM--GKDFWRLRIGIGHPGHRDDVVGYVLKNASKSERQQITNSLMDVDDVLDTLLS 184
Query: 152 KGLTES 157
L ++
Sbjct: 185 GQLEKA 190
>gi|291439150|ref|ZP_06578540.1| peptidyl-tRNA hydrolase [Streptomyces ghanaensis ATCC 14672]
gi|291342045|gb|EFE69001.1| peptidyl-tRNA hydrolase [Streptomyces ghanaensis ATCC 14672]
Length = 200
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 83/132 (62%), Gaps = 2/132 (1%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
V+LAKP +YMNLSG L +YK+P+ V+ HD++ + GVLRL+ GG GHNGLK
Sbjct: 71 VVLAKPMSYMNLSGGPVNALREFYKVPVAHVVAVHDELDIGYGVLRLKLGGGDNGHNGLK 130
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ F ++ R+R GIGRPPG+M F+L+ F++ R+ +D + + ++ L+S
Sbjct: 131 SMTKAF--GADYHRVRFGIGRPPGRMQVADFVLRDFSSAERKELDYFVDRAADAVECLVS 188
Query: 152 KGLTESARHFNT 163
+GL + +N+
Sbjct: 189 EGLERAQSAYNS 200
>gi|319945977|ref|ZP_08020226.1| aminoacyl-tRNA hydrolase [Streptococcus australis ATCC 700641]
gi|417919214|ref|ZP_12562751.1| aminoacyl-tRNA hydrolase [Streptococcus australis ATCC 700641]
gi|319747785|gb|EFW00030.1| aminoacyl-tRNA hydrolase [Streptococcus australis ATCC 700641]
gi|342834344|gb|EGU68618.1| aminoacyl-tRNA hydrolase [Streptococcus australis ATCC 700641]
Length = 189
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 90/170 (52%), Gaps = 11/170 (6%)
Query: 1 MIDAFAESQGISMNTVHCK---ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL 57
++D A+S ++ + H K A F+ V L KP T+MN SG++ L YY L
Sbjct: 26 LVDQLAKSLNLTFS--HDKIFQADVTSTFIDGEKVFLVKPTTFMNESGKAVHALLTYYGL 83
Query: 58 PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQM 117
+ ++V +DD+ + G +RLR G GGHNG+KS++N+ G + F R++IGIGRP M
Sbjct: 84 EVEDLVVIYDDLDMEVGKIRLRTKGSAGGHNGIKSIINHI-GTQTFNRIKIGIGRPKQGM 142
Query: 118 DPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKY 167
+L KF+ I A+ + E L+ L G E T+Q+Y
Sbjct: 143 SVVHHVLGKFDQDDYATILLAIDKSEEALRFYLKDGQFEK-----TMQQY 187
>gi|256960621|ref|ZP_05564792.1| peptidyl-tRNA hydrolase [Enterococcus faecalis Merz96]
gi|293382708|ref|ZP_06628633.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis R712]
gi|312908604|ref|ZP_07767546.1| peptidyl-tRNA hydrolase [Enterococcus faecalis DAPTO 512]
gi|312909248|ref|ZP_07768105.1| peptidyl-tRNA hydrolase [Enterococcus faecalis DAPTO 516]
gi|256951117|gb|EEU67749.1| peptidyl-tRNA hydrolase [Enterococcus faecalis Merz96]
gi|291079868|gb|EFE17232.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis R712]
gi|310625391|gb|EFQ08674.1| peptidyl-tRNA hydrolase [Enterococcus faecalis DAPTO 512]
gi|311290490|gb|EFQ69046.1| peptidyl-tRNA hydrolase [Enterococcus faecalis DAPTO 516]
Length = 188
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 85/163 (52%), Gaps = 4/163 (2%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D A Q +S N + +A + F+G VLL KP T+MN SG S GPL Y+
Sbjct: 26 LDEIAYRQNVSFNNSNFEADIAEFFIGTEKVLLVKPLTFMNESGRSVGPLLTYFGADEED 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
++V +DD+ L G +RLR G GGHNG+KS++ + G F R++IGIGRP
Sbjct: 86 LIVIYDDLDLEVGKIRLRQKGSAGGHNGIKSLIAHL-GTNVFPRIKIGIGRPSKNDTVIH 144
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT--ESARHFN 162
+L F E + A+++ + L +G T E+ FN
Sbjct: 145 HVLSTFPKETHEEMLLAVKKAADA-ALYACEGHTFVETMNQFN 186
>gi|299820652|ref|ZP_07052541.1| aminoacyl-tRNA hydrolase [Listeria grayi DSM 20601]
gi|299817673|gb|EFI84908.1| aminoacyl-tRNA hydrolase [Listeria grayi DSM 20601]
Length = 184
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 2/162 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D + + V G +G VLL KP T+MN SG GPL YY + +
Sbjct: 25 VVDELSYRYQLPWKKVKQNGMVATGMIGSEKVLLVKPLTFMNESGLCVGPLMDYYDIAVE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ LP G +RLR G GGHNG+KS++ + + +EF R+R+G+ RP +
Sbjct: 85 DLIVIYDDLDLPVGKIRLRTKGSAGGHNGMKSIIQHLK-TQEFNRIRVGVDRPRNG-EVI 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+L +F+ + I A+Q + ++ E FN
Sbjct: 143 HHVLGEFSKAEQPTIIEAIQTSADAVEAFAEHSFVEVMNKFN 184
>gi|424864670|ref|ZP_18288573.1| aminoacyl-tRNA hydrolase [SAR86 cluster bacterium SAR86B]
gi|400759416|gb|EJP73598.1| aminoacyl-tRNA hydrolase [SAR86 cluster bacterium SAR86B]
Length = 187
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 78/135 (57%), Gaps = 1/135 (0%)
Query: 29 DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHN 88
+ ++ A P+ Y+N SG + + Y LP ++++FHDD+ L G ++++ NGGH GHN
Sbjct: 54 EEKIMWAIPENYVNNSGLTVEKIKKYTGLPYKKIIIFHDDLDLEPGEVKIKVNGGHAGHN 113
Query: 89 GLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKL 148
GLK + G +EF R+RIGIG P + +++++KF + I+ A V V +
Sbjct: 114 GLKDIFQK-SGTKEFIRVRIGIGHPGDKSIMNSWVVKKFKPQEKVLIEKAYDSFVSVFDM 172
Query: 149 LLSKGLTESARHFNT 163
+ + ++E+ + +T
Sbjct: 173 ICEQNISEAQKELHT 187
>gi|416851418|ref|ZP_11908563.1| aminoacyl-tRNA hydrolase [Streptococcus pseudoporcinus LQ 940-04]
gi|356738907|gb|EHI64139.1| aminoacyl-tRNA hydrolase [Streptococcus pseudoporcinus LQ 940-04]
Length = 186
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 87/163 (53%), Gaps = 3/163 (1%)
Query: 2 IDAFAESQGISMN-TVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+D A++ +S + KA G F+ V KP T+MN SG + L YY + ++
Sbjct: 24 VDQLAKNFDVSFTEDKNFKALIGWAFINQEKVYFVKPTTFMNNSGIAVRALLTYYNIAIS 83
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DD+ + G LR R G GGHNG+KS++ N G++EF R++IGIGRP M
Sbjct: 84 DLIVIYDDLDMEVGKLRFRQKGSAGGHNGIKSIIANI-GSQEFDRVKIGIGRPHSGMTVI 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE-SARHFN 162
+L KF RI L++ V + L +G E + + FN
Sbjct: 143 NHVLGKFEKEDGIRIALTLEKVVMAVNFYLQEGNFELTMQKFN 185
>gi|329117398|ref|ZP_08246115.1| aminoacyl-tRNA hydrolase [Streptococcus parauberis NCFD 2020]
gi|333904255|ref|YP_004478126.1| peptidyl-tRNA hydrolase [Streptococcus parauberis KCTC 11537]
gi|326907803|gb|EGE54717.1| aminoacyl-tRNA hydrolase [Streptococcus parauberis NCFD 2020]
gi|333119520|gb|AEF24454.1| peptidyl-tRNA hydrolase [Streptococcus parauberis KCTC 11537]
gi|456369930|gb|EMF48830.1| Peptidyl-tRNA hydrolase [Streptococcus parauberis KRS-02109]
gi|457093933|gb|EMG24488.1| Peptidyl-tRNA hydrolase [Streptococcus parauberis KRS-02083]
Length = 189
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 80/151 (52%), Gaps = 6/151 (3%)
Query: 17 HCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVL 76
+ KA G F+ V KP T+MN SG + L YY + ++ ++V +DD+ + G +
Sbjct: 43 NFKALIGSSFLNQEKVYFVKPTTFMNNSGIAVKALLTYYNIAIDDLIVIYDDLDMEVGKI 102
Query: 77 RLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERID 136
R R G GGHNG+KS++ + G++EF R++IGIGRP M +L KF+ ID
Sbjct: 103 RFRQRGSAGGHNGIKSIIAHI-GSQEFDRIKIGIGRPQNGMTVINHVLGKFDKDDAITID 161
Query: 137 TALQEGVEVLKLLLSKGLTESARHFNTIQKY 167
L + + + L + E T+QKY
Sbjct: 162 LTLDKVTDAVDFYLKEADFEK-----TMQKY 187
>gi|433448300|ref|ZP_20411273.1| peptidyl-tRNA hydrolase [Weissella ceti NC36]
gi|429539931|gb|ELA07964.1| peptidyl-tRNA hydrolase [Weissella ceti NC36]
Length = 188
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 80/149 (53%), Gaps = 5/149 (3%)
Query: 2 IDAFAESQGIS--MNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPL 59
+DA AE + ++ M++ H + G+ +LL KP TYMN SG + GPL YY L
Sbjct: 26 LDALAERENLTFKMDSAHHAMIADWRYKGE-KILLVKPTTYMNESGRAVGPLMKYYNLEN 84
Query: 60 NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 119
VLV HDDM + G LRLR G GGHNG+KS++ G +EF RL+ GI P +
Sbjct: 85 EDVLVIHDDMDMDLGRLRLRATGSAGGHNGIKSLIQAL-GTKEFTRLKFGISHPKYESQA 143
Query: 120 KA-FLLQKFNAIARERIDTALQEGVEVLK 147
F+L KF + + +E+++
Sbjct: 144 VIDFVLGKFTKDEMPDVMLGIDRTIEIIE 172
>gi|7388025|sp|O85235.1|PTH_LACSK RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|3511016|gb|AAD03811.1| unknown [Lactobacillus sakei]
Length = 177
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 86/152 (56%), Gaps = 6/152 (3%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID E +++N +A +G VLL KP T+MN SG S GPL +YY++ ++
Sbjct: 25 VIDQLCEKYNVTLNKHDFEAEYGSFKYEGETVLLVKPLTFMNDSGRSVGPLMSYYQVGID 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV DDM L G LRLR G GGHNG+KS++ + + ++ F RL+IGI + P +
Sbjct: 85 ELLVIQDDMDLTMGKLRLRQKGSAGGHNGIKSIIAHTK-SQTFKRLKIGI-QHPQKSTVV 142
Query: 121 AFLLQKFNA----IARERIDTALQEGVEVLKL 148
++L F+ + + ID A +E +K+
Sbjct: 143 NWVLTPFDKDGAPVINQAIDQACEESTTGVKM 174
>gi|261855770|ref|YP_003263053.1| peptidyl-tRNA hydrolase [Halothiobacillus neapolitanus c2]
gi|261836239|gb|ACX96006.1| peptidyl-tRNA hydrolase [Halothiobacillus neapolitanus c2]
Length = 194
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 86/165 (52%), Gaps = 6/165 (3%)
Query: 1 MIDAFAESQG--ISMNT-VHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL 57
ID A G +S +T HC+ + FV L KPQT+MNLSG+S +A +YK+
Sbjct: 27 FIDELARHWGGHLSSDTKFHCEML--RIFVKQVDRRLIKPQTFMNLSGKSVAAVANFYKI 84
Query: 58 PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQM 117
P +LV HD++ L G ++L+ G HGGHNGLK + G F RLRIGIG P +
Sbjct: 85 PAESILVVHDELDLLPGKMKLKIGGSHGGHNGLKDIQAQL-GTPNFWRLRIGIGHPGHRD 143
Query: 118 DPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
F+L A R ID +++ V + LL +S + N
Sbjct: 144 QVVGFVLTNPPASERTLIDASIRHAVNEIDALLDIDPEKSTQRIN 188
>gi|166363429|ref|YP_001655702.1| peptidyl-tRNA hydrolase [Microcystis aeruginosa NIES-843]
gi|166085802|dbj|BAG00510.1| peptidyl-tRNA hydrolase [Microcystis aeruginosa NIES-843]
Length = 208
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 93/167 (55%), Gaps = 12/167 (7%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFV--GDAP----VLLAKPQTYMNLSGESTGPLAAYY 55
+D+ A G+S F QGF+ GD+P + L KPQTYMN SG+S + +Y
Sbjct: 37 VDSLARDWGLSWQE---NKRF-QGFIAEGDSPLPGKIRLLKPQTYMNRSGQSVRSVLDWY 92
Query: 56 KLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPG 115
KL +LV +DDM LP G LR+R +G GGHNG+KS++ + G FARLRIGIG+
Sbjct: 93 KLAPESILVIYDDMDLPLGRLRIRLSGSAGGHNGIKSMIAHV-GTENFARLRIGIGKST- 150
Query: 116 QMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+ + +L +F E I L + ++L L +GL ++ +N
Sbjct: 151 EKATISHVLGRFTPQENEVILKVLDLSRKAIELGLKQGLQKAMSLYN 197
>gi|226354902|ref|YP_002784642.1| peptidyl-tRNA hydrolase [Deinococcus deserti VCD115]
gi|259535153|sp|C1CXT2.1|PTH_DEIDV RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226316892|gb|ACO44888.1| putative Peptidyl-tRNA hydrolase [Deinococcus deserti VCD115]
Length = 220
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 83/140 (59%), Gaps = 4/140 (2%)
Query: 27 VGDAP---VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGG 83
+G AP VLL KPQT+MN SG++ P +++KL +LV DD+ P G++++R G
Sbjct: 50 LGPAPGVKVLLVKPQTFMNASGKAVVPRLSFFKLDPGALLVVQDDLDSPFGLMKVRLGGR 109
Query: 84 HGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGV 143
HGG NG++ ++ G FARL++GI RPP DP ++L ++ + + ++ G
Sbjct: 110 HGGQNGVRDII-RLLGTEAFARLKLGISRPPAGRDPADWVLSRWRDEEQSTLGDLVRLGA 168
Query: 144 EVLKLLLSKGLTESARHFNT 163
+ ++ + GL E+ + FN+
Sbjct: 169 DAVERWATAGLAEAQQAFNS 188
>gi|342218861|ref|ZP_08711464.1| aminoacyl-tRNA hydrolase [Megasphaera sp. UPII 135-E]
gi|341588808|gb|EGS32183.1| aminoacyl-tRNA hydrolase [Megasphaera sp. UPII 135-E]
Length = 197
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 81/168 (48%), Gaps = 2/168 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+IDA A + +A G VLL KPQTYMN SG + L +YK+ +
Sbjct: 23 VIDALAARMDNTRWKCEMEALVATTTYGGEKVLLVKPQTYMNDSGRAVRALLHWYKIEAD 82
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+ V +DDM LP G LR+R NG GGHNG+KS++ +G +F R R+GIGRP
Sbjct: 83 HIYVVYDDMDLPIGRLRIRKNGSAGGHNGIKSILE--QGCHDFIRFRLGIGRPLPHWTVV 140
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYK 168
+L F + + + + L G+ + FN +K K
Sbjct: 141 NHVLSPFPSATYTVFKDGVSYAADAVLGCLELGIDKGMNRFNIKKKAK 188
>gi|302380851|ref|ZP_07269314.1| aminoacyl-tRNA hydrolase [Finegoldia magna ACS-171-V-Col3]
gi|417925593|ref|ZP_12569012.1| aminoacyl-tRNA hydrolase [Finegoldia magna SY403409CC001050417]
gi|302311346|gb|EFK93364.1| aminoacyl-tRNA hydrolase [Finegoldia magna ACS-171-V-Col3]
gi|341591219|gb|EGS34427.1| aminoacyl-tRNA hydrolase [Finegoldia magna SY403409CC001050417]
Length = 189
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 88/151 (58%), Gaps = 6/151 (3%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A+ I +N + K+ G+GF+G+ V+L KP TYMN SG++ YY L
Sbjct: 25 VIDDLAKKLNIKVNKLKFKSLIGEGFIGNEKVILMKPSTYMNDSGKAILDCFNYYNLSAE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V DD+ +P G +R++ G G HNGLKS++ +++FAR+++ +G+ + D K
Sbjct: 85 NLIVICDDIDIPFGTIRIKKKGSAGTHNGLKSIIYLIE-SQDFARIKVSVGQND-KYDLK 142
Query: 121 AFLLQKFN----AIARERIDTALQEGVEVLK 147
F+L +F+ + + ID + +++++
Sbjct: 143 DFVLSQFSKNEFEVLEKEIDMSSDAAIKIVE 173
>gi|332685797|ref|YP_004455571.1| peptidyl-tRNA hydrolase [Melissococcus plutonius ATCC 35311]
gi|332369806|dbj|BAK20762.1| peptidyl-tRNA hydrolase [Melissococcus plutonius ATCC 35311]
Length = 188
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 2/162 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D A + N +A F+ ++L KP TYMN SG S GPL YY L L+
Sbjct: 26 LDEIATRYKVDFNKNQFEAVTTDFFIDSEKIMLIKPLTYMNESGRSIGPLVDYYGLNLSD 85
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
+++ +DD+ LP G +R+R G GGHNG+KS++ + G +F R+++GI RP
Sbjct: 86 LIIIYDDLDLPVGKVRVRAKGSAGGHNGIKSLIAHL-GTNDFTRIKVGISRPENNDTVIH 144
Query: 122 FLLQKFNAIARERIDTALQEGVE-VLKLLLSKGLTESARHFN 162
+L F I A++ + + + S + ++ FN
Sbjct: 145 HVLSAFKKEQHTEIQKAIKTAADAAIYMCSSHTVIDAMNQFN 186
>gi|345865809|ref|ZP_08817978.1| peptidyl-tRNA hydrolase [endosymbiont of Tevnia jerichonana (vent
Tica)]
gi|345877598|ref|ZP_08829340.1| putative exported LysM bacterial cell wall protein [endosymbiont of
Riftia pachyptila (vent Ph05)]
gi|344225346|gb|EGV51707.1| putative exported LysM bacterial cell wall protein [endosymbiont of
Riftia pachyptila (vent Ph05)]
gi|345123075|gb|EGW52986.1| peptidyl-tRNA hydrolase [endosymbiont of Tevnia jerichonana (vent
Tica)]
Length = 197
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 76/124 (61%), Gaps = 1/124 (0%)
Query: 34 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 93
L P T+MN SG+S LA+Y+K+ +LV HD++ LP G RL+ GGH GHNGL+ +
Sbjct: 67 LLMPSTFMNRSGQSVSSLASYFKIAPEEILVAHDELDLPTGQARLKRGGGHAGHNGLRDI 126
Query: 94 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 153
M+ G+R+F RLRIGI RP + ++L + + R I+ A+ + + L+LL+
Sbjct: 127 MSAI-GSRDFLRLRIGIDRPQQKGPVTNYVLGRPSKQQRSEIEDAIDKAADCLELLIQGE 185
Query: 154 LTES 157
L ++
Sbjct: 186 LPQA 189
>gi|302388650|ref|YP_003824471.1| peptidyl-tRNA hydrolase [Thermosediminibacter oceani DSM 16646]
gi|302199278|gb|ADL06848.1| peptidyl-tRNA hydrolase [Thermosediminibacter oceani DSM 16646]
Length = 187
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 90/165 (54%), Gaps = 3/165 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
++D+ A GI ++ V K G+G +LL KP TYMN SG+S +YK+P
Sbjct: 25 VLDSLAAELGIKVDKVKFKGLLGEGVYEGKKLLLLKPMTYMNNSGQSVVEAVKFYKIPPE 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
++V +DDM LP G LR+R +G GG G++S++ + F R+RIGIGRP G D
Sbjct: 85 NLVVIYDDMDLPVGRLRVRGSGSSGGQKGMESIIYHI-ATEGFPRIRIGIGRPKG--DVI 141
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQ 165
+L +F+ R++ID + V ++ G+ E+ +N +
Sbjct: 142 NHVLGRFDKEERKKIDAVIDAAVGAALTIVQHGVQEAMNRYNGFE 186
>gi|159027229|emb|CAO89324.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 223
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 92/167 (55%), Gaps = 12/167 (7%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFV--GDAP----VLLAKPQTYMNLSGESTGPLAAYY 55
+D+ A G+S F QGF+ GD P + L KPQTYMN SG+S + +Y
Sbjct: 52 VDSLARDWGLSWQE---NKRF-QGFIAEGDGPFPGKIRLLKPQTYMNRSGQSVRSVLDWY 107
Query: 56 KLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPG 115
KL +LV +DDM LP G LR+R +G GGHNG+KS++ + G FARLRIGIG+
Sbjct: 108 KLAPESILVIYDDMDLPLGRLRIRLSGSAGGHNGIKSMIAHV-GTENFARLRIGIGK-SS 165
Query: 116 QMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 162
+ + +L +F E I L + ++L L +GL ++ +N
Sbjct: 166 EKATISHVLGRFTPQENEVILKVLDLSRKAIELGLKQGLQKAMSLYN 212
>gi|338812330|ref|ZP_08624509.1| peptidyl-tRNA hydrolase [Acetonema longum DSM 6540]
gi|337275680|gb|EGO64138.1| peptidyl-tRNA hydrolase [Acetonema longum DSM 6540]
Length = 200
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 82/135 (60%), Gaps = 1/135 (0%)
Query: 28 GDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGH 87
G PV+L KPQTYMNLSG + + +YKL V+V DDM LP G LRLR GG GGH
Sbjct: 66 GAEPVILVKPQTYMNLSGVAVASVLNWYKLKPEDVVVVFDDMDLPTGKLRLRLQGGSGGH 125
Query: 88 NGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 147
G++S++ + + F R+R+GIGRPP + ++L +F A + ++ ++ V+ ++
Sbjct: 126 KGIESLLVHLDKD-TFIRMRVGIGRPPAGWETANYVLGRFTAEEKAPMEASITRAVDAVE 184
Query: 148 LLLSKGLTESARHFN 162
+L G T++ FN
Sbjct: 185 YILKHGATKAMNEFN 199
>gi|385813084|ref|YP_005849477.1| Peptidyl-tRNA hydrolase [Lactobacillus helveticus H10]
gi|323465803|gb|ADX69490.1| Peptidyl-tRNA hydrolase [Lactobacillus helveticus H10]
Length = 162
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 86/150 (57%), Gaps = 2/150 (1%)
Query: 2 IDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNR 61
+D + +G+S++ + + + + V+L +P+TYMN SG S +A ++K+
Sbjct: 3 MDHYLNEKGLSLDKDKFEGHWTKQQINGEDVILLEPKTYMNESGRSVSQIANFFKVAPED 62
Query: 62 VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA 121
VL+ DDM +P G +R+R NG GGHNG+KS++ + G +F RL+IGI R P +
Sbjct: 63 VLIIQDDMDMPIGKIRIRANGKSGGHNGIKSIIRDL-GTEKFNRLKIGI-RHPKNTTVVS 120
Query: 122 FLLQKFNAIARERIDTALQEGVEVLKLLLS 151
++L FN ++ +D A V+++ ++
Sbjct: 121 WVLTPFNDEQQKLMDDAFDTSVKIIDDFIA 150
>gi|392947771|ref|ZP_10313398.1| Peptidyl-tRNA hydrolase [Lactobacillus pentosus KCA1]
gi|334882368|emb|CCB83367.1| peptidyl-tRNA hydrolase (PTH) [Lactobacillus pentosus MP-10]
gi|339637645|emb|CCC16599.1| peptidyl-tRNA hydrolase (Pth) [Lactobacillus pentosus IG1]
gi|392437010|gb|EIW14907.1| Peptidyl-tRNA hydrolase [Lactobacillus pentosus KCA1]
Length = 185
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 80/151 (52%), Gaps = 2/151 (1%)
Query: 1 MIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLN 60
+ID A T +A F +LL KP TYMN SG + GPL +YY +
Sbjct: 25 IIDELAAKLNADFQTSKFEAQVATAFQNGEKILLVKPSTYMNDSGRAVGPLMSYYNIEPA 84
Query: 61 RVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPK 120
+LV HDD+ LP G +RL+ G GGHNG+KS++++ G++ F R+++GI P +M
Sbjct: 85 DLLVIHDDLDLPLGKVRLKQKGSAGGHNGIKSIISHV-GDQHFKRVKVGIDHPQ-KMSVV 142
Query: 121 AFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
++L KF + + A + ++ L+
Sbjct: 143 DYVLGKFKPAEVAQFEDAKTTALAAIEAWLA 173
>gi|257457974|ref|ZP_05623133.1| peptidyl-tRNA hydrolase [Treponema vincentii ATCC 35580]
gi|257444687|gb|EEV19771.1| peptidyl-tRNA hydrolase [Treponema vincentii ATCC 35580]
Length = 205
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 77/138 (55%), Gaps = 8/138 (5%)
Query: 22 FGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHN 81
F G V KP+TYMNLSGES G A ++K+P +L+ HD++ LP L L+ +
Sbjct: 49 FPAAVTGGQAVHALKPETYMNLSGESVGEAAQFFKIPPAEILIVHDELELPPAALSLKWS 108
Query: 82 GGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA-------FLLQKFNAIARER 134
GG GGHNGL+SV G +F RLRIGIGRP G+ A ++L F+
Sbjct: 109 GGLGGHNGLRSVKAAL-GTADFWRLRIGIGRPGGKKSSSADHPDIAGYVLSPFSQEEFAL 167
Query: 135 IDTALQEGVEVLKLLLSK 152
+DTAL + + L+++
Sbjct: 168 LDTALPQLEPLFTALITE 185
>gi|227548220|ref|ZP_03978269.1| peptidyl-tRNA hydrolase [Corynebacterium lipophiloflavum DSM 44291]
gi|227079694|gb|EEI17657.1| peptidyl-tRNA hydrolase [Corynebacterium lipophiloflavum DSM 44291]
Length = 200
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 71/126 (56%), Gaps = 5/126 (3%)
Query: 32 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 91
+ A+P TYMN SG + GPLAA +P RV+V HD++ LP G +RLR G GHNGLK
Sbjct: 72 IAYARPLTYMNESGAAVGPLAARLNVPAERVIVLHDELDLPPGRVRLRRGGSENGHNGLK 131
Query: 92 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 151
S+ + G R++ R+RIGIGRPPG ++L + A Q +L++
Sbjct: 132 SLSEHL-GTRDYVRVRIGIGRPPGGTAVPDWVLSAVTGDVSAETEKAAQAA----RLVIV 186
Query: 152 KGLTES 157
GL +
Sbjct: 187 DGLERA 192
>gi|303327049|ref|ZP_07357491.1| aminoacyl-tRNA hydrolase [Desulfovibrio sp. 3_1_syn3]
gi|345890987|ref|ZP_08841848.1| peptidyl-tRNA hydrolase [Desulfovibrio sp. 6_1_46AFAA]
gi|302863037|gb|EFL85969.1| aminoacyl-tRNA hydrolase [Desulfovibrio sp. 3_1_syn3]
gi|345048712|gb|EGW52535.1| peptidyl-tRNA hydrolase [Desulfovibrio sp. 6_1_46AFAA]
Length = 205
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 75/122 (61%), Gaps = 1/122 (0%)
Query: 33 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 92
L A PQT+MNLSG+ PL ++KL +++V HD++ +P G LR + GG+ GHNGLKS
Sbjct: 67 LAAMPQTFMNLSGQCVQPLLVWHKLKPEQLVVAHDELDIPAGELRFKRGGGNAGHNGLKS 126
Query: 93 VMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 152
+ G +F RLR+GIGRPP + D ++L + +A ER+ L + ++ L K
Sbjct: 127 I-TELLGTPDFYRLRLGIGRPPHKGDVINWVLGRPDAEDAERLRAVLPKALDTLFAFADK 185
Query: 153 GL 154
GL
Sbjct: 186 GL 187
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.139 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,871,945,491
Number of Sequences: 23463169
Number of extensions: 121296171
Number of successful extensions: 233076
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3845
Number of HSP's successfully gapped in prelim test: 132
Number of HSP's that attempted gapping in prelim test: 225926
Number of HSP's gapped (non-prelim): 4028
length of query: 177
length of database: 8,064,228,071
effective HSP length: 133
effective length of query: 44
effective length of database: 9,238,593,890
effective search space: 406498131160
effective search space used: 406498131160
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 71 (32.0 bits)