Citrus Sinensis ID: 030461

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------

MGCPNWLEDKPCTSTTSMQEYESNQAGSGIIMVSHVGCGTWTKKLSNSQTWESLPLSALFNAKNDADNIGDDEILLVPTCCGSLCKYLMVATGRASVFILRARAQTIIKAWDHAVGIICVHEAGGKVTDWRGSPIDLDADQAERRAIFPSGGILVTNDNLHHQIVEMISSRSSIFLW

cccccccccccccccccccccccccccccEEEEEEccccEEEEccccccccccccEEEEEccccccccccccccccccccccccccEEEEEEcccEEEEEEccccccccHHHHHHHHHHHHHcccEEEcccccccccccHHHHHcccccccEEEEEcHHHHHHHHHHHHHccccccc

ccccccccccccccccccccccccccccEEEEEEEEcccccEcccccccccccccHHHHccccHHHcccccHHccccccEcccHHEEEEEEcccccEEEEccccccccEHHHcHHHHHHHHHcccEEEccccccccccccccccEEEccccEEEEccHHHHHHHHHHHHHccccccc

mgcpnwledkpctsttsmqeyesnqagsgIIMVSHVgcgtwtkklsnsqtweslplsalfnakndadnigddeillvPTCCGSLCKYLMVATGRASVFILRARAQTIIKAWDHAVGIICvheaggkvtdwrgspidldadqaerraifpsggilvtndnLHHQIVEMISsrssiflw

mgcpnwledkpctSTTSMQEYESNQAGSGIIMVSHVGCGTWTKKLSNSQTWESLPLSALFNAKNDADNIGDDEILLVPTCCGSLCKYLMVATGRASVFILRARAQTIIKAWDHAVGIICVHEaggkvtdwrgSPIDLDADQAERRAIFPsggilvtndnLHHQIVEmissrssiflw

MGCPNWLEDKPCTSTTSMQEYESNQAGSGIIMVSHVGCGTWTKKLSNSQTWESLPLSALFNAKNDADNIGDDEILLVPTCCGSLCKYLMVATGRASVFILRARAQTIIKAWDHAVGIICVHEAGGKVTDWRGSPIDLDADQAERRAIFPSGGILVTNDNLHHQIVEMISSRSSIFLW

***************************SGIIMVSHVGCGTWTKKLSNSQTWESLPLSALFNAKNDADNIGDDEILLVPTCCGSLCKYLMVATGRASVFILRARAQTIIKAWDHAVGIICVHEAGGKVTDWRGSPIDLDADQAERRAIFPSGGILVTNDNLHHQIVEMIS********

MGCPNWLEDKPCTSTTSMQEYESNQAGSGIIMVSHVGCGTWTKKL************ALFNAKNDADNIGDDEILLVPTCCGSLCKYLMVATGRASVFILRARAQTIIKAWDHAVGIICVHEAGGKVTDWRGSPIDLDADQAERRAIFPSGGILVTNDNLHHQIVEMISSRSSIF*W

MGCPNWLEDKPCTSTTSMQEYESNQAGSGIIMVSHVGCGTWTKKLSNSQTWESLPLSALFNAKNDADNIGDDEILLVPTCCGSLCKYLMVATGRASVFILRARAQTIIKAWDHAVGIICVHEAGGKVTDWRGSPIDLDADQAERRAIFPSGGILVTNDNLHHQIVEMISSRSSIFLW

*GC**WLED****************AGSGIIMVSHVGCGTWTKKLSNSQTWESLPLSALFNAKNDADNIGDDEILLVPTCCGSLCKYLMVATGRASVFILRARAQTIIKAWDHAVGIICVHEAGGKVTDWRGSPIDLDADQAERRAIFPSGGILVTNDNLHHQIVEMISSRSSIF**

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MGCPNWLEDKPCTSTTSMQEYESNQAGSGIIMVSHVGCGTWTKKLSNSQTWESLPLSALFNAKNDADNIGDDEILLVPTCCGSLCKYLMVATGRASVFILRARAQTIIKAWDHAVGIICVHEAGGKVTDWRGSPIDLDADQAERRAIFPSGGILVTNDNLHHQIVEMISSRSSIFLW

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		177	2.2.26 [Sep-21-2011]
Q9M0Y6		397	Putative PAP-specific pho	yes	no	0.898	0.400	0.542	2e-56
Q5BCG1		352	3'(2'),5'-bisphosphate nu	yes	no	0.926	0.465	0.251	2e-08
Q38945		373	PAP-specific phosphatase	no	no	0.898	0.426	0.295	1e-07
Q8GY63		357	Probable SAL3 phosphatase	no	no	0.864	0.428	0.284	2e-06
Q42546		353	SAL1 phosphatase OS=Arabi	no	no	0.909	0.456	0.233	3e-06
Q55F34		332	3'(2'),5'-bisphosphate nu	yes	no	0.694	0.370	0.282	7e-06
Q59XQ1		358	3'(2'),5'-bisphosphate nu	N/A	no	0.463	0.229	0.284	1e-05
P0CY21		364	3'(2'),5'-bisphosphate nu	N/A	no	0.463	0.225	0.272	3e-05
P0CY20		364	3'(2'),5'-bisphosphate nu	N/A	no	0.463	0.225	0.272	3e-05
O94505		353	3'(2'),5'-bisphosphate nu	yes	no	0.519	0.260	0.288	3e-05

>sp\|Q9M0Y6\|DPNPM_ARATH Putative PAP-specific phosphatase, mitochondrial OS=Arabidopsis thaliana GN=At4g05090 PE=2 SV=1	Back alignment and function desciption

 Score =  218 bits (555), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 109/201 (54%), Positives = 134/201 (66%), Gaps = 42/201 (20%)

Query: 1   MGCPNWLEDKPCTSTTSMQEYESNQAGSGIIMVSHVGCGTWTKKLSN------------- 47
           MGCPNW  D             S+   +G +M+SH+GCGTWTKKL N             
Sbjct: 207 MGCPNWPGD-------------SSDGSTGTLMLSHIGCGTWTKKLQNVSGNVAGDWIRCF 253

Query: 48  ----------------SQTWESLPLSALFNAKNDADNIGDDEILLVPTCCGSLCKYLMVA 91
                           SQTWESLPLS  F+A   ++++   EILL+PTCCGSLCKYLMVA
Sbjct: 254 VDACVLMNKARFCIQESQTWESLPLSGFFDASTVSEDLKHKEILLLPTCCGSLCKYLMVA 313

Query: 92  TGRASVFILRARAQTIIKAWDHAVGIICVHEAGGKVTDWRGSPIDLDADQAERRAIFPSG 151
           +GRASVF+LRA+ Q  IK+WDHAVGIICVHEAGGKVTDW G  I+L+ DQ+ERR IFP+G
Sbjct: 314 SGRASVFLLRAKTQRTIKSWDHAVGIICVHEAGGKVTDWEGDEINLEEDQSERRLIFPAG 373

Query: 152 GILVTNDNLHHQIVEMISSRS 172
           G++V+N +LH+QI+EMISS S
Sbjct: 374 GVVVSNGSLHNQILEMISSAS 394

Converts adenosine 3'-phosphate 5'-phosphosulfate (PAPS) to adenosine 5'-phosphosulfate (APS) and 3'(2')-phosphoadenosine 5'- phosphate (PAP) to AMP.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 7

>sp\|Q5BCG1\|DPNP_EMENI 3'(2'),5'-bisphosphate nucleotidase OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=AN1769 PE=1 SV=1	Back alignment and function description

>sp\|Q38945\|DPNPH_ARATH PAP-specific phosphatase HAL2-like OS=Arabidopsis thaliana GN=AHL PE=2 SV=1	Back alignment and function description

>sp\|Q8GY63\|DPNP3_ARATH Probable SAL3 phosphatase OS=Arabidopsis thaliana GN=SAL3 PE=2 SV=1	Back alignment and function description

>sp\|Q42546\|DPNP1_ARATH SAL1 phosphatase OS=Arabidopsis thaliana GN=SAL1 PE=1 SV=1	Back alignment and function description

>sp\|Q55F34\|DPNP_DICDI 3'(2'),5'-bisphosphate nucleotidase OS=Dictyostelium discoideum GN=DDB_G0268652 PE=3 SV=1	Back alignment and function description

>sp\|Q59XQ1\|HAL22_CANAL 3'(2'),5'-bisphosphate nucleotidase 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=HAL22 PE=3 SV=2	Back alignment and function description

>sp\|P0CY21\|HAL21_CANAW 3'(2'),5'-bisphosphate nucleotidase 1 OS=Candida albicans (strain WO-1) GN=HAL21 PE=3 SV=1	Back alignment and function description

>sp\|P0CY20\|HAL21_CANAL 3'(2'),5'-bisphosphate nucleotidase 1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=HAL21 PE=3 SV=1	Back alignment and function description

>sp\|O94505\|DPNP_SCHPO 3'(2'),5'-bisphosphate nucleotidase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tol1 PE=3 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		177
224078840		411	predicted protein [Populus trichocarpa]	0.971	0.418	0.607	4e-63
255567433		414	diphosphonucleoside phosphohydrolase, pu	0.966	0.413	0.597	4e-63
359495718		437	PREDICTED: putative PAP-specific phospha	0.960	0.389	0.587	1e-59
356554991		403	PREDICTED: putative PAP-specific phospha	0.983	0.431	0.554	6e-59
15234590		397	putative PAP-specific phosphatase [Arabi	0.898	0.400	0.542	7e-55
297809703		393	inositol monophosphatase family protein	0.915	0.412	0.529	7e-55
356546680		423	PREDICTED: LOW QUALITY PROTEIN: putative	0.983	0.411	0.514	2e-50
449433900		411	PREDICTED: putative PAP-specific phospha	0.977	0.420	0.519	8e-50
449479384		411	PREDICTED: putative PAP-specific phospha	0.977	0.420	0.519	2e-49
357122442		424	PREDICTED: putative PAP-specific phospha	0.932	0.389	0.507	7e-48

>gi\|224078840\|ref\|XP_002305648.1\| predicted protein [Populus trichocarpa] gi\|222848612\|gb\|EEE86159.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score =  245 bits (626), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 124/204 (60%), Positives = 143/204 (70%), Gaps = 32/204 (15%)

Query: 1   MGCPNWLEDKPCTSTTSMQEYESNQAGSGIIMVSHVGCGTWTKKLSN------------- 47
           MGCPNW E     ST  +Q  ES  + SGI+MV+HVGCGTW ++LS+             
Sbjct: 208 MGCPNWKEASSYNSTIDVQGSESVPSRSGILMVAHVGCGTWARQLSDLMGVSAKVPNGWT 267

Query: 48  -------------------SQTWESLPLSALFNAKNDADNIGDDEILLVPTCCGSLCKYL 88
                              SQTWES+PLSA F+A +DA  + D EILL+PTCCGSLCKYL
Sbjct: 268 RCFVDGCHLVPKARFCISDSQTWESVPLSAFFSATSDAGGVSDKEILLLPTCCGSLCKYL 327

Query: 89  MVATGRASVFILRARAQTIIKAWDHAVGIICVHEAGGKVTDWRGSPIDLDADQAERRAIF 148
           MVA+GRASVFILRARAQT IKAWDHAVGIICVHEAGGKVTDW+GS IDL ADQ ERR +F
Sbjct: 328 MVASGRASVFILRARAQTTIKAWDHAVGIICVHEAGGKVTDWKGSDIDLAADQVERRILF 387

Query: 149 PSGGILVTNDNLHHQIVEMISSRS 172
           PS G+LVTN  +H+QI+EMISS S
Sbjct: 388 PSMGVLVTNGTIHNQILEMISSTS 411

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|255567433\|ref\|XP_002524696.1\| diphosphonucleoside phosphohydrolase, putative [Ricinus communis] gi\|223536057\|gb\|EEF37715.1\| diphosphonucleoside phosphohydrolase, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|359495718\|ref\|XP_003635071.1\| PREDICTED: putative PAP-specific phosphatase, mitochondrial-like [Vitis vinifera] gi\|297745650\|emb\|CBI40861.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356554991\|ref\|XP_003545824.1\| PREDICTED: putative PAP-specific phosphatase, mitochondrial-like [Glycine max]	Back alignment and taxonomy information

>gi|15234590|ref|NP_192418.1| putative PAP-specific phosphatase [Arabidopsis thaliana] gi|34395727|sp|Q9M0Y6.1|DPNPM_ARATH RecName: Full=Putative PAP-specific phosphatase, mitochondrial; AltName: Full=3'(2'),5'-bisphosphate nucleotidase; AltName: Full=3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase; AltName: Full=DPNPase; Flags: Precursor gi|7267268|emb|CAB81051.1| 3'(2'), 5'-BISPHOSPHATE NUCLEOTIDASE-like protein [Arabidopsis thaliana] gi|21553719|gb|AAM62812.1| 3(2),5-BISPHOSPHATE NUCLEOTIDASE-like protein [Arabidopsis thaliana] gi|51968744|dbj|BAD43064.1| 3'(2'),5'-bisphosphate nucleotidase-like protein [Arabidopsis thaliana] gi|332657076|gb|AEE82476.1| putative PAP-specific phosphatase [Arabidopsis thaliana]

Back alignment and taxonomy information

>gi\|297809703\|ref\|XP_002872735.1\| inositol monophosphatase family protein [Arabidopsis lyrata subsp. lyrata] gi\|297318572\|gb\|EFH48994.1\| inositol monophosphatase family protein [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|356546680\|ref\|XP_003541751.1\| PREDICTED: LOW QUALITY PROTEIN: putative PAP-specific phosphatase, mitochondrial-like [Glycine max]	Back alignment and taxonomy information

>gi\|449433900\|ref\|XP_004134734.1\| PREDICTED: putative PAP-specific phosphatase, mitochondrial-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|449479384\|ref\|XP_004155585.1\| PREDICTED: putative PAP-specific phosphatase, mitochondrial-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|357122442\|ref\|XP_003562924.1\| PREDICTED: putative PAP-specific phosphatase, mitochondrial-like isoform 1 [Brachypodium distachyon]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		177
TAIR\|locus:2115698		397	AT4G05090 "AT4G05090" [Arabido	0.966	0.430	0.550	2e-47
TAIR\|locus:2147279		373	HL "HAL2-like" [Arabidopsis th	0.457	0.217	0.373	3.4e-09
ASPGD\|ASPL0000065989		352	AN7034 [Emericella nidulans (t	0.446	0.224	0.297	1.3e-06
CGD\|CAL0002967		358	HAL22 [Candida albicans (taxid	0.463	0.229	0.295	1.2e-05
UNIPROTKB\|Q59XQ1		358	HAL22 "3'(2'),5'-bisphosphate	0.463	0.229	0.295	1.2e-05
POMBASE\|SPCC1753.04		353	tol1 "3'(2'),5'-bisphosphate n	0.519	0.260	0.288	4.2e-05
CGD\|CAL0000710		364	HAL21 [Candida albicans (taxid	0.463	0.225	0.284	4.4e-05
UNIPROTKB\|P0CY20		364	HAL21 "3'(2'),5'-bisphosphate	0.463	0.225	0.284	4.4e-05
TAIR\|locus:2160831		357	AT5G63990 [Arabidopsis thalian	0.514	0.254	0.329	6.1e-05
DICTYBASE\|DDB_G0268652		332	ippB "inositol polyphosphate p	0.903	0.481	0.290	7.2e-05

TAIR\|locus:2115698 AT4G05090 "AT4G05090" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
 Identities = 104/189 (55%), Positives = 126/189 (66%)

Query:     1 MGCPNWLEDKP-------------C-TSTTSMQEYESNQAGSGIIMVSHVGCGTWTKK-- 44
             MGCPNW  D               C T T  +Q    N AG  I       C    K   
Sbjct:   207 MGCPNWPGDSSDGSTGTLMLSHIGCGTWTKKLQNVSGNVAGDWIRCFVDA-CVLMNKARF 265

Query:    45 -LSNSQTWESLPLSALFNAKNDADNIGDDEILLVPTCCGSLCKYLMVATGRASVFILRAR 103
              +  SQTWESLPLS  F+A   ++++   EILL+PTCCGSLCKYLMVA+GRASVF+LRA+
Sbjct:   266 CIQESQTWESLPLSGFFDASTVSEDLKHKEILLLPTCCGSLCKYLMVASGRASVFLLRAK 325

Query:   104 AQTIIKAWDHAVGIICVHEAGGKVTDWRGSPIDLDADQAERRAIFPSGGILVTNDNLHHQ 163
              Q  IK+WDHAVGIICVHEAGGKVTDW G  I+L+ DQ+ERR IFP+GG++V+N +LH+Q
Sbjct:   326 TQRTIKSWDHAVGIICVHEAGGKVTDWEGDEINLEEDQSERRLIFPAGGVVVSNGSLHNQ 385

Query:   164 IVEMISSRS 172
             I+EMISS S
Sbjct:   386 ILEMISSAS 394

GO:0006790 "sulfur compound metabolic process" evidence=ISS

GO:0008441 "3'(2'),5'-bisphosphate nucleotidase activity" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0046854 "phosphatidylinositol phosphorylation" evidence=IEA

TAIR\|locus:2147279 HL "HAL2-like" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

ASPGD\|ASPL0000065989 AN7034 [Emericella nidulans (taxid:162425)]	Back alignment and assigned GO terms

CGD\|CAL0002967 HAL22 [Candida albicans (taxid:5476)]	Back alignment and assigned GO terms

UNIPROTKB\|Q59XQ1 HAL22 "3'(2'),5'-bisphosphate nucleotidase 2" [Candida albicans SC5314 (taxid:237561)]	Back alignment and assigned GO terms

POMBASE\|SPCC1753.04 tol1 "3'(2'),5'-bisphosphate nucleotidase/inositol-1,4- bisphosphate 1-phosphatase" [Schizosaccharomyces pombe (taxid:4896)]	Back alignment and assigned GO terms

CGD\|CAL0000710 HAL21 [Candida albicans (taxid:5476)]	Back alignment and assigned GO terms

UNIPROTKB\|P0CY20 HAL21 "3'(2'),5'-bisphosphate nucleotidase 1" [Candida albicans SC5314 (taxid:237561)]	Back alignment and assigned GO terms

TAIR\|locus:2160831 AT5G63990 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

DICTYBASE\|DDB_G0268652 ippB "inositol polyphosphate phosphatase B" [Dictyostelium discoideum (taxid:44689)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.3	LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	gw1.IV.2193.1	hypothetical protein (372 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	grail3.0175000802	hypothetical protein (462 aa)	•	0.899
	fgenesh4_pg.C_LG_II000227	SubName- Full=Putative uncharacterized protein; (426 aa)	•	0.899
	estExt_fgenesh4_pg.C_LG_V1509	hypothetical protein (427 aa)	•	0.899
	estExt_Genewise1_v1.C_LG_VIII2439	hypothetical protein (462 aa)	•	0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		177
cd01517		274	cd01517, PAP_phosphatase, PAP-phosphatase_like dom	7e-29
pfam00459		269	pfam00459, Inositol_P, Inositol monophosphatase fa	3e-12
TIGR01330		353	TIGR01330, bisphos_HAL2, 3'(2'),5'-bisphosphate nu	1e-10
COG0483		260	COG0483, SuhB, Archaeal fructose-1,6-bisphosphatas	5e-10
TIGR02067		251	TIGR02067, his_9_HisN, histidinol-phosphatase, ino	2e-09
cd01637		238	cd01637, IMPase_like, Inositol-monophosphatase-lik	2e-08
COG1218		276	COG1218, CysQ, 3'-Phosphoadenosine 5'-phosphosulfa	4e-08
cd01641		248	cd01641, Bacterial_IMPase_like_1, Predominantly ba	5e-08
cd01639		244	cd01639, IMPase, IMPase, inositol monophosphatase	3e-06
PRK12676		263	PRK12676, PRK12676, bifunctional inositol-1 monoph	4e-06
cd01636		184	cd01636, FIG, FIG, FBPase/IMPase/glpX-like domain	7e-06
cd01638		242	cd01638, CysQ, CysQ, a 3'-Phosphoadenosine-5'-phos	2e-05
cd01640		293	cd01640, IPPase, IPPase; Inositol polyphosphate-1-	5e-05
TIGR01331		249	TIGR01331, bisphos_cysQ, 3'(2'),5'-bisphosphate nu	1e-04
PRK14076		569	PRK14076, pnk, inorganic polyphosphate/ATP-NAD kin	1e-04
cd01515		257	cd01515, Arch_FBPase_1, Archaeal fructose-1,6-bisp	2e-04
PLN02737		363	PLN02737, PLN02737, inositol monophosphatase famil	3e-04
PLN02553		270	PLN02553, PLN02553, inositol-phosphate phosphatase	0.003

>gnl\|CDD\|238775 cd01517, PAP_phosphatase, PAP-phosphatase_like domains	Back alignment and domain information

 Score =  107 bits (269), Expect = 7e-29
 Identities = 47/184 (25%), Positives = 71/184 (38%), Gaps = 34/184 (18%)

Query: 1   MGCPNWLEDKPCTSTTSMQEYESNQAGSGIIMVSHVGCGTWTKKLSNSQTWE----SLPL 56
           +GCPN   D                 G G +  +  G G W + L  S         L  
Sbjct: 109 IGCPNLPLD---------------DGGGGDLFSAVRGQGAWLRPLDGSSLQPLSVRQLTN 153

Query: 57  SALF------NAKNDADNIGDDEILLV----PTCCGSLCKYLMVATGRASVFILRARAQT 106
           +A         + + +  +      L     P    S  KY  VA G A  ++    + +
Sbjct: 154 AARASFCESVESAHSSHRLQAAIKALGGTPQPVRLDSQAKYAAVARGAADFYLRLPLSMS 213

Query: 107 I-IKAWDHAVGIICVHEAGGKVTDWRGSPIDLDADQAERRAIFPSGGILVTNDNLHHQIV 165
              K WDHA G++ V EAGGKVTD  G P+D        R +  +GG++     +H Q++
Sbjct: 214 YREKIWDHAAGVLIVEEAGGKVTDADGKPLDFGKG----RKLLNNGGLIAAPGEIHEQVL 269

Query: 166 EMIS 169
           E + 
Sbjct: 270 EALR 273

PAP-phosphatase is a member of the inositol monophosphatase family, and catalyses the hydrolysis of 3'-phosphoadenosine-5'-phosphate (PAP) to AMP. In Saccharomyces cerevisiae, HAL2 (MET22) is involved in methionine biosynthesis and provides increased salt tolerance when over-expressed. Bacterial members of this domain family may differ in their substrate specificity and dephosphorylate different targets, as the substrate binding site does not appear to be conserved in that sub-set. Length = 274

>gnl\|CDD\|215930 pfam00459, Inositol_P, Inositol monophosphatase family	Back alignment and domain information

>gnl\|CDD\|233360 TIGR01330, bisphos_HAL2, 3'(2'),5'-bisphosphate nucleotidase, HAL2 family	Back alignment and domain information

>gnl\|CDD\|223559 COG0483, SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family [Carbohydrate transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|213680 TIGR02067, his_9_HisN, histidinol-phosphatase, inositol monophosphatase family	Back alignment and domain information

>gnl\|CDD\|238815 cd01637, IMPase_like, Inositol-monophosphatase-like domains	Back alignment and domain information

>gnl\|CDD\|224139 COG1218, CysQ, 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase [Inorganic ion transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|238819 cd01641, Bacterial_IMPase_like_1, Predominantly bacterial family of Mg++ dependend phosphatases, related to inositol monophosphatases	Back alignment and domain information

>gnl\|CDD\|238817 cd01639, IMPase, IMPase, inositol monophosphatase and related domains	Back alignment and domain information

>gnl\|CDD\|183673 PRK12676, PRK12676, bifunctional inositol-1 monophosphatase/fructose-1,6-bisphosphatase; Reviewed	Back alignment and domain information

>gnl\|CDD\|238814 cd01636, FIG, FIG, FBPase/IMPase/glpX-like domain	Back alignment and domain information

>gnl\|CDD\|238816 cd01638, CysQ, CysQ, a 3'-Phosphoadenosine-5'-phosphosulfate (PAPS) 3'-phosphatase, is a bacterial member of the inositol monophosphatase family	Back alignment and domain information

>gnl\|CDD\|238818 cd01640, IPPase, IPPase; Inositol polyphosphate-1-phosphatase, a member of the Mg++ dependent family of inositol monophosphatase-like domains, hydrolyzes the 1' position phosphate from inositol 1,3,4-trisphosphate and inositol 1,4-bisphosphate	Back alignment and domain information

>gnl\|CDD\|130398 TIGR01331, bisphos_cysQ, 3'(2'),5'-bisphosphate nucleotidase, bacterial	Back alignment and domain information

>gnl\|CDD\|237601 PRK14076, pnk, inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>gnl\|CDD\|238773 cd01515, Arch_FBPase_1, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family (FBPase class IV)	Back alignment and domain information

>gnl\|CDD\|215392 PLN02737, PLN02737, inositol monophosphatase family protein	Back alignment and domain information

>gnl\|CDD\|178168 PLN02553, PLN02553, inositol-phosphate phosphatase	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		177
PLN02553		270	inositol-phosphate phosphatase	99.96
PRK10757		267	inositol monophosphatase; Provisional	99.95
COG0483		260	SuhB Archaeal fructose-1,6-bisphosphatase and rela	99.95
PLN02911		296	inositol-phosphate phosphatase	99.95
TIGR02067		251	his_9_proposed histidinol-phosphate phosphatase Hi	99.95
PLN02737		363	inositol monophosphatase family protein	99.95
KOG1528		351	consensus Salt-sensitive 3'-phosphoadenosine-5'-ph	99.95
cd01641		248	Bacterial_IMPase_like_1 Predominantly bacterial fa	99.94
KOG2951		279	consensus Inositol monophosphatase [Carbohydrate t	99.94
PRK12676		263	bifunctional inositol-1 monophosphatase/fructose-1	99.94
cd01515		257	Arch_FBPase_1 Archaeal fructose-1,6-bisphosphatase	99.94
cd01517		274	PAP_phosphatase PAP-phosphatase_like domains. PAP-	99.93
TIGR01330		353	bisphos_HAL2 3'(2'),5'-bisphosphate nucleotidase,	99.92
cd01643		242	Bacterial_IMPase_like_2 Bacterial family of Mg++ d	99.92
cd01638		242	CysQ CysQ, a 3'-Phosphoadenosine-5'-phosphosulfate	99.91
PRK14076		569	pnk inorganic polyphosphate/ATP-NAD kinase; Provis	99.91
cd01639		244	IMPase IMPase, inositol monophosphatase and relate	99.91
PF00459		270	Inositol_P: Inositol monophosphatase family; Inter	99.91
TIGR01331		249	bisphos_cysQ 3'(2'),5'-bisphosphate nucleotidase,	99.9
cd01640		293	IPPase IPPase; Inositol polyphosphate-1-phosphatas	99.9
cd01637		238	IMPase_like Inositol-monophosphatase-like domains.	99.89
COG1218		276	CysQ 3'-Phosphoadenosine 5'-phosphosulfate (PAPS)	99.89
PRK10931		246	adenosine-3'(2'),5'-bisphosphate nucleotidase; Pro	99.88
cd01642		244	Arch_FBPase_2 Putative fructose-1,6-bisphosphatase	99.68
KOG3853		350	consensus Inositol monophosphatase [Signal transdu	99.23
cd01636		184	FIG FIG, FBPase/IMPase/glpX-like domain. A superfa	99.23
KOG3099		340	consensus Bisphosphate 3'-nucleotidase BPNT1/Inosi	98.71

>PLN02553 inositol-phosphate phosphatase	Back alignment and domain information

Probab=99.96  E-value=8.7e-29  Score=199.65  Aligned_cols=150  Identities=24%  Similarity=0.240  Sum_probs=120.5

Q ss_pred             CCCCCCCCCCCCCCCcccccccccCCCCcEEEEEcCCcEEee--ccCCCCcCCcccccceEEeccCCCCcc----cc---
Q 030461            2 GCPNWLEDKPCTSTTSMQEYESNQAGSGIIMVSHVGCGTWTK--KLSNSQTWESLPLSALFNAKNDADNIG----DD---   72 (177)
Q Consensus         2 ~~pn~~~~~~~~~~~~~~~gvi~~P~~~~~~~A~~G~Ga~~n--~l~~~~~~~~~~l~~~~~~~~~~~~~~----~~---   72 (177)
                      |.|.|.++.+.....++.+||||+|.++++|+|.+|+|||+|  ++++++.   .++..+++.++.+....    ..   
T Consensus       102 g~p~~avsIal~~~g~pv~GvV~~P~~~e~~~A~~G~Ga~~ng~~l~~~~~---~~l~~~~i~~~~~~~~~~~~~~~~~~  178 (270)
T PLN02553        102 GFPFVCVSIGLTIGKVPVVGVVYNPILDELFTAVKGKGAFLNGKPIKASSQ---SELGKALLATEVGTKRDKATVDATTN  178 (270)
T ss_pred             cCCceEEEEEEEECCEEEEEEEecCCCCCeEEEEcCccccCCCccccCCCC---CCHhHcEEEeCCCccccchhHHHHHH
Confidence            679999999988899999999999999999999999999999  7776554   34556666554332111    10   


Q ss_pred             cc-----c-ccccccchH-hhHHHHHhCCccEEEEecccCCCC-ceeeHhHHHHHHHhcCCEEeccCCCCCCCCchhhhh
Q 030461           73 EI-----L-LVPTCCGSL-CKYLMVATGRASVFILRARAQTII-KAWDHAVGIICVHEAGGKVTDWRGSPIDLDADQAER  144 (177)
Q Consensus        73 ~l-----~-~~~~~~Gs~-~~~~~VA~G~~d~~v~~~~~~~~~-~~WD~AAg~lI~~EAGG~vtd~~G~~~~~~~~~~~~  144 (177)
                      .+     . ...|.+||+ +++|+||+|++|+|+.     .+. ++||+|||.+|++||||.++|++|+++.+.      
T Consensus       179 ~~~~l~~~~~~~R~~Gs~al~l~~VA~G~~D~~~~-----~~~~~~WD~AAg~li~~EAGG~v~~~~G~~~~~~------  247 (270)
T PLN02553        179 RINALLYKVRSLRMSGSCALNLCGVACGRLDIFYE-----IGFGGPWDVAAGAVIVKEAGGLVFDPSGGPFDIM------  247 (270)
T ss_pred             HHHHHHHhhceeccccHHHHHHHHHHcCCcCEEEE-----cCCCCcHHHHHHHHHHHhCCCEEECCCCCccccC------
Confidence            11     0 135778986 7999999999999995     345 699999999999999999999999997552      


Q ss_pred             hcccCCCcEEEeChHHHHHHHHHHhc
Q 030461          145 RAIFPSGGILVTNDNLHHQIVEMISS  170 (177)
Q Consensus       145 ~~~~~~~~~vAa~~~~~~~i~~~l~~  170 (177)
                           ...++|+++++|+++++.+++
T Consensus       248 -----~~~~ia~~~~l~~~l~~~l~~  268 (270)
T PLN02553        248 -----SRRVAASNGHLKDAFVEALRQ  268 (270)
T ss_pred             -----CCcEEEECHHHHHHHHHHhhc
Confidence                 446899999999999998865

>PRK10757 inositol monophosphatase; Provisional	Back alignment and domain information

>COG0483 SuhB Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family [Carbohydrate transport and metabolism]	Back alignment and domain information

>PLN02911 inositol-phosphate phosphatase	Back alignment and domain information

>TIGR02067 his_9_proposed histidinol-phosphate phosphatase HisN, inositol monophosphatase family	Back alignment and domain information

>PLN02737 inositol monophosphatase family protein	Back alignment and domain information

>KOG1528 consensus Salt-sensitive 3'-phosphoadenosine-5'-phosphatase HAL2/SAL1 [Nucleotide transport and metabolism; Inorganic ion transport and metabolism]	Back alignment and domain information

>cd01641 Bacterial_IMPase_like_1 Predominantly bacterial family of Mg++ dependend phosphatases, related to inositol monophosphatases	Back alignment and domain information

>KOG2951 consensus Inositol monophosphatase [Carbohydrate transport and metabolism]	Back alignment and domain information

>PRK12676 bifunctional inositol-1 monophosphatase/fructose-1,6-bisphosphatase; Reviewed	Back alignment and domain information

>cd01515 Arch_FBPase_1 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family (FBPase class IV)	Back alignment and domain information

>cd01517 PAP_phosphatase PAP-phosphatase_like domains	Back alignment and domain information

>TIGR01330 bisphos_HAL2 3'(2'),5'-bisphosphate nucleotidase, HAL2 family	Back alignment and domain information

>cd01643 Bacterial_IMPase_like_2 Bacterial family of Mg++ dependent phosphatases, related to inositol monophosphatases	Back alignment and domain information

>cd01638 CysQ CysQ, a 3'-Phosphoadenosine-5'-phosphosulfate (PAPS) 3'-phosphatase, is a bacterial member of the inositol monophosphatase family	Back alignment and domain information

>PRK14076 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>cd01639 IMPase IMPase, inositol monophosphatase and related domains	Back alignment and domain information

>PF00459 Inositol_P: Inositol monophosphatase family; InterPro: IPR000760 It has been shown that several proteins share two sequence motifs []	Back alignment and domain information

>TIGR01331 bisphos_cysQ 3'(2'),5'-bisphosphate nucleotidase, bacterial	Back alignment and domain information

>cd01640 IPPase IPPase; Inositol polyphosphate-1-phosphatase, a member of the Mg++ dependent family of inositol monophosphatase-like domains, hydrolyzes the 1' position phosphate from inositol 1,3,4-trisphosphate and inositol 1,4-bisphosphate	Back alignment and domain information

>cd01637 IMPase_like Inositol-monophosphatase-like domains	Back alignment and domain information

>COG1218 CysQ 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase [Inorganic ion transport and metabolism]	Back alignment and domain information

>PRK10931 adenosine-3'(2'),5'-bisphosphate nucleotidase; Provisional	Back alignment and domain information

>cd01642 Arch_FBPase_2 Putative fructose-1,6-bisphosphatase or related enzymes of inositol monophosphatase family	Back alignment and domain information

>KOG3853 consensus Inositol monophosphatase [Signal transduction mechanisms]	Back alignment and domain information

>cd01636 FIG FIG, FBPase/IMPase/glpX-like domain	Back alignment and domain information

>KOG3099 consensus Bisphosphate 3'-nucleotidase BPNT1/Inositol polyphosphate 1-phosphatase [Nucleotide transport and metabolism]	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		177
1qgx_A		357	X-Ray Structure Of Yeast Hal2p Length = 357		4e-05

>pdb|1QGX|A Chain A, X-Ray Structure Of Yeast Hal2p Length = 357

Back alignment and structure

Iteration: 1

Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 23/154 (14%) Query: 1 MGCPNWLEDKPCTSTTSMQEYESNQAGSGIIMVSHVGCGTWTKKLSNSQTWESLPLSALF 60 +GCPN + S+ Q+ + +++ G I + G G + S++++W + + L Sbjct: 173 IGCPNLV-----LSSYGAQDLKGHES-FGYIFRAVRGLGAFYSPSSDAESWTKIHVRHLK 226 Query: 61 NAKN-------DADNIGDDEILLVPTCCG--------SLCKYLMVATGRASVFI-LRARA 104 + K+ + + DE + S KY ++A G A V++ L + Sbjct: 227 DTKDMITLEGVEKGHSSHDEQTAIKNKLNISKSLHLDSQAKYCLLALGLADVYLRLPIKL 286 Query: 105 QTIIKAWDHAVGIICVHEAGGKVTD-WRGSPIDL 137 K WDHA G + VHEAGG TD P+D Sbjct: 287 SYQEKIWDHAAGNVIVHEAGGIHTDAMEDVPLDF 320

PyMOL of 1qgx

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		177
1ka1_A		357	Halotolerance protein HAL2; nucleotidase, salt tol	3e-26
3ryd_A		273	Inositol monophosphatase family protein; impase fo	1e-12
3t0j_A		283	Impase II, inositol monophosphatase family protein	2e-12
1lbv_A		252	Fbpase/impase, fructose 1,6-bisphosphatase/inosito	1e-11
1g0h_A		252	Inositol monophosphatase; homodimer, complexed wit	2e-11
2p3n_A		256	Inositol-1-monophosphatase; tetramer, hydrolase; 2	4e-11
2fvz_A		273	Inositol monophosphatase 2; inositol metabolism, s	4e-11
1vdw_A		254	Hypothetical protein PH1897; homodimer, riken stru	5e-11
1jp4_A		308	3'(2'),5'-bisphosphate nucleotidase; protein-produ	1e-10
1xi6_A		262	Extragenic suppressor; structural genomics, southe	2e-10
2bji_A		277	Inositol-1(OR 4)-monophosphatase; hydrolase, aspar	2e-10
2qfl_A		267	Inositol-1-monophosphatase; impase extragenic supp	4e-10
3lv0_A		267	Extragenic suppressor protein SUHB; niaid, seattle	5e-10
2q74_A		299	Inositol-1-monophosphatase; alpha-beta-alpha-beta-	4e-09
1inp_A		400	Inositol polyphosphate 1-phosphatase; hydrolase(ph	7e-09
2pcr_A		264	Inositol-1-monophosphatase; bipolar disorder, stru	3e-08

>1ka1_A Halotolerance protein HAL2; nucleotidase, salt tolerance, inositol, hydrolase; HET: A3P; 1.30A {Saccharomyces cerevisiae} SCOP: e.7.1.1 PDB: 1k9y_A 1ka0_A* 1k9z_A* 1qgx_A* Length = 357	Back alignment and structure

 Score =  101 bits (252), Expect = 3e-26
 Identities = 44/196 (22%), Positives = 78/196 (39%), Gaps = 34/196 (17%)

Query: 1   MGCPNWLEDKPCTSTTSMQEYESNQAGSGIIMVSHVGCGTWTKKLSNSQTWESLPLSALF 60
           +GCPN         ++   +        G I  +  G G +    S++++W  + +  L 
Sbjct: 173 IGCPNL------VLSSYGAQDLKGHESFGYIFRAVRGLGAFYSPSSDAESWTKIHVRHLK 226

Query: 61  NAKN---------------DADNIGDDEILLVPTCCGSLCKYLMVATGRASVFI-LRARA 104
           + K+               +   I +   +       S  KY ++A G A V++ L  + 
Sbjct: 227 DTKDMITLEGVEKGHSSHDEQTAIKNKLNISKSLHLDSQAKYCLLALGLADVYLRLPIKL 286

Query: 105 QTIIKAWDHAVGIICVHEAGGKVTDW-RGSPIDLDADQAERRAIFPSGGILVTNDN--LH 161
               K WDHA G + VHEAGG  TD     P+D             + G++ ++    LH
Sbjct: 287 SYQEKIWDHAAGNVIVHEAGGIHTDAMEDVPLDFG-----NGRTLATKGVIASSGPRELH 341

Query: 162 HQIV----EMISSRSS 173
             +V    ++I SR++
Sbjct: 342 DLVVSTSCDVIQSRNA 357

PyMOL of 1ka1

>3ryd_A Inositol monophosphatase family protein; impase fold, FIG superfamily protein, hydrolase; HET: SRT; 2.37A {Staphylococcus aureus} PDB: 3qmf_A Length = 273	Back alignment and structure

>3t0j_A Impase II, inositol monophosphatase family protein; FIG superfamily, hydrolase; HET: PG4; 2.59A {Staphylococcus aureus} Length = 283	Back alignment and structure

>1lbv_A Fbpase/impase, fructose 1,6-bisphosphatase/inositol monophosphatase; dual activity, archaeal phosphatase, APO- form, hydrolase; 1.80A {Archaeoglobus fulgidus} SCOP: e.7.1.1 PDB: 1lbw_A 1lbx_A* 1lby_A* 1lbz_A* Length = 252	Back alignment and structure

>1g0h_A Inositol monophosphatase; homodimer, complexed with Ca2+ and I-1-P, hydrolase; HET: IPD; 2.30A {Methanocaldococcus jannaschii} SCOP: e.7.1.1 PDB: 1dk4_A* 1g0i_A* Length = 252	Back alignment and structure

>2p3n_A Inositol-1-monophosphatase; tetramer, hydrolase; 2.20A {Thermotoga maritima} PDB: 2p3v_A* Length = 256	Back alignment and structure

>2fvz_A Inositol monophosphatase 2; inositol metabolism, structural genomics, structural genomics consortium, SGC, hydrolase; 2.40A {Homo sapiens} PDB: 2czh_A 2czi_A 2czk_A 2ddk_A Length = 273	Back alignment and structure

>1vdw_A Hypothetical protein PH1897; homodimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; 1.30A {Pyrococcus horikoshii} SCOP: e.7.1.1 Length = 254	Back alignment and structure

>1jp4_A 3'(2'),5'-bisphosphate nucleotidase; protein-product complex, sugar nucleotidase fold, hydrolase; HET: AMP; 1.69A {Rattus norvegicus} SCOP: e.7.1.1 PDB: 2wef_A* Length = 308	Back alignment and structure

>1xi6_A Extragenic suppressor; structural genomics, southeast collaboratory for structural genomics hyperthermophIle, PSI; 2.80A {Pyrococcus furiosus} SCOP: e.7.1.1 Length = 262	Back alignment and structure

>2bji_A Inositol-1(OR 4)-monophosphatase; hydrolase, aspartic proteinase mechanism, aspartyl protease, succinimide, zymogen; 1.30A {Bos taurus} PDB: 1imb_A* 1ima_A* 1imc_A 1imd_A 1ime_A 1imf_A 2hhm_A 1awb_A Length = 277	Back alignment and structure

>2qfl_A Inositol-1-monophosphatase; impase extragenic suppressor, dimerization, hydrolase; 1.90A {Escherichia coli} Length = 267	Back alignment and structure

>3lv0_A Extragenic suppressor protein SUHB; niaid, seattle structural genomics center for infectious disease, ssgcid, CAT scratch disease; 1.85A {Bartonella henselae} PDB: 3luz_A Length = 267	Back alignment and structure

>2q74_A Inositol-1-monophosphatase; alpha-beta-alpha-beta-alpha sandwich, hydrolase; 2.60A {Mycobacterium tuberculosis} Length = 299	Back alignment and structure

>1inp_A Inositol polyphosphate 1-phosphatase; hydrolase(phosphoric monoester); 2.30A {Bos taurus} SCOP: e.7.1.1 Length = 400	Back alignment and structure

>2pcr_A Inositol-1-monophosphatase; bipolar disorder, struct genomics, NPPSFA, national project on protein structural AN functional analyses; 2.60A {Aquifex aeolicus} Length = 264	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		177
3lv0_A		267	Extragenic suppressor protein SUHB; niaid, seattle	99.97
3ryd_A		273	Inositol monophosphatase family protein; impase fo	99.97
3t0j_A		283	Impase II, inositol monophosphatase family protein	99.96
2p3n_A		256	Inositol-1-monophosphatase; tetramer, hydrolase; 2	99.96
2bji_A		277	Inositol-1(OR 4)-monophosphatase; hydrolase, aspar	99.96
2fvz_A		273	Inositol monophosphatase 2; inositol metabolism, s	99.95
1lbv_A		252	Fbpase/impase, fructose 1,6-bisphosphatase/inosito	99.95
2pcr_A		264	Inositol-1-monophosphatase; bipolar disorder, stru	99.95
1g0h_A		252	Inositol monophosphatase; homodimer, complexed wit	99.95
2qfl_A		267	Inositol-1-monophosphatase; impase extragenic supp	99.95
2q74_A		299	Inositol-1-monophosphatase; alpha-beta-alpha-beta-	99.95
1vdw_A		254	Hypothetical protein PH1897; homodimer, riken stru	99.95
1xi6_A		262	Extragenic suppressor; structural genomics, southe	99.94
1jp4_A		308	3'(2'),5'-bisphosphate nucleotidase; protein-produ	99.93
3b8b_A		292	CYSQ, sulfite synthesis pathway protein; 3'-phosph	99.92
1ka1_A		357	Halotolerance protein HAL2; nucleotidase, salt tol	99.91
1inp_A		400	Inositol polyphosphate 1-phosphatase; hydrolase(ph	99.9
1nuw_A		337	Fructose-1,6-bisphosphatase; allosteric enzymes, g	99.8
2gq1_A		332	Fructose-1,6-bisphosphatase; allosteric activator	99.4
2fhy_A		374	Fructose-1,6-bisphosphatase 1; allosteric inhibito	98.73
1dcu_A		357	Fructose-1,6-bisphosphatase; chloroplast, photosyn	97.87

>3lv0_A Extragenic suppressor protein SUHB; niaid, seattle structural genomics center for infectious disease, ssgcid, CAT scratch disease; 1.85A {Bartonella henselae} SCOP: e.7.1.0 PDB: 3luz_A	Back alignment and structure

Probab=99.97  E-value=3.6e-31  Score=212.12  Aligned_cols=151  Identities=21%  Similarity=0.220  Sum_probs=123.8

Q ss_pred             CCCCCCCCCCCCCCCcccccccccCCCCcEEEEEcCCcEEee--ccCCCCcCCcccccceEEeccCCCCcc---cc---c
Q 030461            2 GCPNWLEDKPCTSTTSMQEYESNQAGSGIIMVSHVGCGTWTK--KLSNSQTWESLPLSALFNAKNDADNIG---DD---E   73 (177)
Q Consensus         2 ~~pn~~~~~~~~~~~~~~~gvi~~P~~~~~~~A~~G~Ga~~n--~l~~~~~~~~~~l~~~~~~~~~~~~~~---~~---~   73 (177)
                      |.|.|.++.+.....++.+||||+|.++++|+|.+|+|||+|  +++++..   .++..+++.++++....   +.   .
T Consensus       101 g~p~f~vsIAl~~~g~pv~GvV~~P~~~e~~~A~~G~GA~~ng~~i~vs~~---~~l~~~~v~~~~~~~~~~~~~~~~~~  177 (267)
T 3lv0_A          101 GIPFFAVSIALESQGKIVAGVIYNPINDELFTAERGSGAFFNDRRCRVSAR---RRLEDCVIATGMPHLGRPGHGTYLIE  177 (267)
T ss_dssp             TCSCCEEEEEEEETTEEEEEEEEETTTTEEEEEETTTEEEETTEECCCCCC---CSGGGCEEEECCCCC--CCHHHHHHH
T ss_pred             CCCceEEEEEEEECCEEEEEEEecCCCccEEEEECCccccCCCeecccCCC---CChhhcEEEEecCcccccchHHHHHH
Confidence            679999999999899999999999999999999999999999  7877654   35667777666554221   11   1


Q ss_pred             cc------ccccccchH-hhHHHHHhCCccEEEEecccCCCCceeeHhHHHHHHHhcCCEEeccCCCCCCCCchhhhhhc
Q 030461           74 IL------LVPTCCGSL-CKYLMVATGRASVFILRARAQTIIKAWDHAVGIICVHEAGGKVTDWRGSPIDLDADQAERRA  146 (177)
Q Consensus        74 l~------~~~~~~Gs~-~~~~~VA~G~~d~~v~~~~~~~~~~~WD~AAg~lI~~EAGG~vtd~~G~~~~~~~~~~~~~~  146 (177)
                      +.      ...|++||+ +++|+||+|++|+|++     .++++||+|||.+|++||||.++|++|+|+.+         
T Consensus       178 ~~~l~~~~~~~r~~Gsaal~l~~vA~G~~d~y~~-----~~~~~WD~AAg~liv~eAGG~vtd~~G~~~~~---------  243 (267)
T 3lv0_A          178 LRNVMAEVSGIRRFGTAALDLAYVAAGRTDGFWE-----DNLQIWDMAAGILMVREAGGFVTDKEGGNDIF---------  243 (267)
T ss_dssp             HHHHHTTCSEEEBCSCSHHHHHHHHTTSSSEEEE-----SSCCHHHHHHHHHHHHHTTCEEECTTSSSCHH---------
T ss_pred             HHHHHHhcCeEEEecHHHHHHHHHhCcCccEEEE-----CCCCHHHHHHHHHHHHhCCCEEECCCCCcccC---------
Confidence            11      134678885 7999999999999995     56999999999999999999999999998643         


Q ss_pred             ccCCCcEEEeChHHHHHHHHHHhcc
Q 030461          147 IFPSGGILVTNDNLHHQIVEMISSR  171 (177)
Q Consensus       147 ~~~~~~~vAa~~~~~~~i~~~l~~~  171 (177)
                        .+..++|+|+.+|+++++.+++.
T Consensus       244 --~~~~iia~~~~l~~~l~~~l~~~  266 (267)
T 3lv0_A          244 --RKKNIIAGNEHIRIKLERALKKG  266 (267)
T ss_dssp             --HHTCEEEECHHHHHHHHHHHHTT
T ss_pred             --CCCEEEEECHHHHHHHHHHHhcc
Confidence              25568999999999999998753

PyMOL of 3lv0

>3ryd_A Inositol monophosphatase family protein; impase fold, FIG superfamily protein, hydrolase; HET: SRT; 2.37A {Staphylococcus aureus} PDB: 3qmf_A	Back alignment and structure

>3t0j_A Impase II, inositol monophosphatase family protein; FIG superfamily, hydrolase; HET: PG4; 2.59A {Staphylococcus aureus}	Back alignment and structure

>2p3n_A Inositol-1-monophosphatase; tetramer, hydrolase; 2.20A {Thermotoga maritima} PDB: 2p3v_A*	Back alignment and structure

>2bji_A Inositol-1(OR 4)-monophosphatase; hydrolase, aspartic proteinase mechanism, aspartyl protease, succinimide, zymogen; 1.30A {Bos taurus} PDB: 1imb_A* 1ima_A* 1imc_A 1imd_A 1ime_A 1imf_A 2hhm_A 1awb_A	Back alignment and structure

>2fvz_A Inositol monophosphatase 2; inositol metabolism, structural genomics, structural genomics consortium, SGC, hydrolase; 2.40A {Homo sapiens} PDB: 2czh_A 2czi_A 2czk_A 2ddk_A	Back alignment and structure

>1lbv_A Fbpase/impase, fructose 1,6-bisphosphatase/inositol monophosphatase; dual activity, archaeal phosphatase, APO- form, hydrolase; 1.80A {Archaeoglobus fulgidus} SCOP: e.7.1.1 PDB: 1lbw_A 1lbx_A* 1lby_A* 1lbz_A*	Back alignment and structure

>2pcr_A Inositol-1-monophosphatase; bipolar disorder, struct genomics, NPPSFA, national project on protein structural AN functional analyses; 2.60A {Aquifex aeolicus}	Back alignment and structure

>1g0h_A Inositol monophosphatase; homodimer, complexed with Ca2+ and I-1-P, hydrolase; HET: IPD; 2.30A {Methanocaldococcus jannaschii} SCOP: e.7.1.1 PDB: 1dk4_A* 1g0i_A*	Back alignment and structure

>2qfl_A Inositol-1-monophosphatase; impase extragenic suppressor, dimerization, hydrolase; 1.90A {Escherichia coli}	Back alignment and structure

>2q74_A Inositol-1-monophosphatase; alpha-beta-alpha-beta-alpha sandwich, hydrolase; 2.60A {Mycobacterium tuberculosis}	Back alignment and structure

>1vdw_A Hypothetical protein PH1897; homodimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; 1.30A {Pyrococcus horikoshii} SCOP: e.7.1.1	Back alignment and structure

>1xi6_A Extragenic suppressor; structural genomics, southeast collaboratory for structural genomics hyperthermophIle, PSI; 2.80A {Pyrococcus furiosus} SCOP: e.7.1.1	Back alignment and structure

>1jp4_A 3'(2'),5'-bisphosphate nucleotidase; protein-product complex, sugar nucleotidase fold, hydrolase; HET: AMP; 1.69A {Rattus norvegicus} SCOP: e.7.1.1 PDB: 2wef_A*	Back alignment and structure

>3b8b_A CYSQ, sulfite synthesis pathway protein; 3'-phosphoadenosine-5'-phosphosulfate (PAPS) 3'-phosphatase, structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}	Back alignment and structure

>1ka1_A Halotolerance protein HAL2; nucleotidase, salt tolerance, inositol, hydrolase; HET: A3P; 1.30A {Saccharomyces cerevisiae} SCOP: e.7.1.1 PDB: 1k9y_A 1ka0_A* 1k9z_A* 1qgx_A*	Back alignment and structure

>1inp_A Inositol polyphosphate 1-phosphatase; hydrolase(phosphoric monoester); 2.30A {Bos taurus} SCOP: e.7.1.1	Back alignment and structure

>1nuw_A Fructose-1,6-bisphosphatase; allosteric enzymes, gluconeogenesis, hydrola; HET: F6P; 1.30A {Sus scrofa} SCOP: e.7.1.1 PDB: 1eyi_A* 1eyj_A* 1cnq_A* 1eyk_A* 1nux_A* 1nuy_A* 1nuz_A* 1nv0_A* 1nv1_A* 1nv2_A* 1nv3_A* 1nv4_A* 1nv5_A* 1nv6_A* 1nv7_A* 1q9d_A* 2qvu_A* 2qvv_A* 1fj6_A* 1fj9_A* ...	Back alignment and structure

>2gq1_A Fructose-1,6-bisphosphatase; allosteric activator site, quaternary conformation, hydrolas; 1.45A {Escherichia coli} PDB: 2owz_A* 2ox3_A* 2q8m_A* 2qvr_A*	Back alignment and structure

>2fhy_A Fructose-1,6-bisphosphatase 1; allosteric inhibitors human fbpase, benzoxazole, intersubunit allosteric inhibition of human fpbase, hydrolase; HET: A37; 2.95A {Homo sapiens}	Back alignment and structure

>1dcu_A Fructose-1,6-bisphosphatase; chloroplast, photosynthesis, redox regulation, thioredoxin, allostery, hydrolase; 2.20A {Pisum sativum} SCOP: e.7.1.1 PDB: 1d9q_A 1dbz_A 1spi_A	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		177
d1inpa_		400	e.7.1.1 (A:) Inositol polyphosphate 1-phosphatase	8e-14
d1ka1a_		354	e.7.1.1 (A:) 3';5'-adenosine bisphosphatase, PAP p	1e-11
d1jp4a_		304	e.7.1.1 (A:) PIPase {Rat (Rattus norvegicus) [TaxI	1e-10
d1lbva_		252	e.7.1.1 (A:) Archaeal inositol monophosphatase/fru	2e-09
d2hhma_		272	e.7.1.1 (A:) Inositol monophosphatase {Human (Homo	6e-09
d1vdwa_		253	e.7.1.1 (A:) Archaeal inositol monophosphatase/fru	2e-08
d1g0ha_		252	e.7.1.1 (A:) Archaeal inositol monophosphatase/fru	4e-08
d1xi6a_		249	e.7.1.1 (A:) Archaeal inositol monophosphatase/fru	2e-07

>d1inpa_ e.7.1.1 (A:) Inositol polyphosphate 1-phosphatase {Cow (Bos taurus), brain [TaxId: 9913]} Length = 400	Back information, alignment and structure


class: Multi-domain proteins (alpha and beta)
fold: Carbohydrate phosphatase
superfamily: Carbohydrate phosphatase
family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like
domain: Inositol polyphosphate 1-phosphatase
species: Cow (Bos taurus), brain [TaxId: 9913]

 Score = 65.8 bits (159), Expect = 8e-14
 Identities = 14/108 (12%), Positives = 29/108 (26%), Gaps = 19/108 (17%)

Query: 77  VPTCCGSLCKYLMVATGRASVFILRARAQTIIKAWDHAVGIICVHEAGGKVTDWRGSPID 136
           +    G+  K L V  G A ++I           WD       +   GG + D +     
Sbjct: 285 IFRAAGAGYKSLCVILGLADIYIFSEDT---TFKWDSCAAHAILRAMGGGMVDLKECLER 341

Query: 137 LDADQAERRAIFP---------------SGGILVT-NDNLHHQIVEMI 168
                 +   +                  GG++   ++      +  +
Sbjct: 342 NPDTGLDLPQLVYHVGNEGAAGVDQWANKGGLIAYRSEKQLETFLSRL 389

PyMOL of d1inpa_

>d1ka1a_ e.7.1.1 (A:) 3';5'-adenosine bisphosphatase, PAP phosphatase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 354	Back information, alignment and structure

>d1jp4a_ e.7.1.1 (A:) PIPase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 304	Back information, alignment and structure

>d1lbva_ e.7.1.1 (A:) Archaeal inositol monophosphatase/fructose-1,6-bisphosphatase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 252	Back information, alignment and structure

>d2hhma_ e.7.1.1 (A:) Inositol monophosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 272	Back information, alignment and structure

>d1vdwa_ e.7.1.1 (A:) Archaeal inositol monophosphatase/fructose-1,6-bisphosphatase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 253	Back information, alignment and structure

>d1g0ha_ e.7.1.1 (A:) Archaeal inositol monophosphatase/fructose-1,6-bisphosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 252	Back information, alignment and structure

>d1xi6a_ e.7.1.1 (A:) Archaeal inositol monophosphatase/fructose-1,6-bisphosphatase {Pyrococcus furiosus [TaxId: 2261]} Length = 249	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		177
d1lbva_		252	Archaeal inositol monophosphatase/fructose-1,6-bis	99.94
d2hhma_		272	Inositol monophosphatase {Human (Homo sapiens) [Ta	99.93
d1g0ha_		252	Archaeal inositol monophosphatase/fructose-1,6-bis	99.92
d1vdwa_		253	Archaeal inositol monophosphatase/fructose-1,6-bis	99.92
d1xi6a_		249	Archaeal inositol monophosphatase/fructose-1,6-bis	99.92
d1ka1a_		354	3';5'-adenosine bisphosphatase, PAP phosphatase {B	99.91
d1inpa_		400	Inositol polyphosphate 1-phosphatase {Cow (Bos tau	99.89
d1jp4a_		304	PIPase {Rat (Rattus norvegicus) [TaxId: 10116]}	99.85

>d1lbva_ e.7.1.1 (A:) Archaeal inositol monophosphatase/fructose-1,6-bisphosphatase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}	Back information, alignment and structure

class: Multi-domain proteins (alpha and beta)
fold: Carbohydrate phosphatase
superfamily: Carbohydrate phosphatase
family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like
domain: Archaeal inositol monophosphatase/fructose-1,6-bisphosphatase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.94  E-value=5.1e-27  Score=184.56  Aligned_cols=154  Identities=18%  Similarity=0.206  Sum_probs=116.5

Q ss_pred             CCCCCCCCCCCCCCCc---ccccccccCCCCcEEEEEcCCcEEee--ccCCCCcCCcccccceEEeccCCCCcccccccc
Q 030461            2 GCPNWLEDKPCTSTTS---MQEYESNQAGSGIIMVSHVGCGTWTK--KLSNSQTWESLPLSALFNAKNDADNIGDDEILL   76 (177)
Q Consensus         2 ~~pn~~~~~~~~~~~~---~~~gvi~~P~~~~~~~A~~G~Ga~~n--~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~   76 (177)
                      |.|.|.++.+.....+   +.+|+||+|.++++|+|. |.|+|+|  ++++++.   .++....+..........    .
T Consensus        93 g~p~f~v~ial~~~~~~~~pv~Gvi~~P~~~~~~~a~-~~ga~~n~~~i~vs~~---~~~~~~~~~~~~~~~~~~----~  164 (252)
T d1lbva_          93 GIPVYSVSLCFSYSDKLKDAFFGYVYNLATGDEYYAD-SSGAYRNGERIEVSDA---EELYCNAIIYYPDRKFPF----K  164 (252)
T ss_dssp             TCSCCEEEEEEESSSBGGGEEEEEEEETTTCCEEEEE-TTEEEETTEEECCCCC---CSSSSEEEEECCCSCCCC----S
T ss_pred             ccchhcceeeEEecccccCccchhhhhhhhhhhhhcc-cccccccCcccccccc---cchhhhhccccccccchh----h
Confidence            6788888877776644   679999999999999995 8899998  7776654   234344332221111111    1


Q ss_pred             cccccchH-hhHHHHHhCCccEEEEecccCCCCceeeHhHHHHHHHhcCCEEeccCCCCCCCCchhhhhhcccCCCcEEE
Q 030461           77 VPTCCGSL-CKYLMVATGRASVFILRARAQTIIKAWDHAVGIICVHEAGGKVTDWRGSPIDLDADQAERRAIFPSGGILV  155 (177)
Q Consensus        77 ~~~~~Gs~-~~~~~VA~G~~d~~v~~~~~~~~~~~WD~AAg~lI~~EAGG~vtd~~G~~~~~~~~~~~~~~~~~~~~~vA  155 (177)
                      ..|.+||+ +++|+||+|++|+|+++.+ ....++||+|||.+|++||||.++|++|+++.++...     .....+++|
T Consensus       165 ~~r~~Gs~~~~~~~vA~G~~d~yi~~~~-~~~~~~WD~aAg~~I~~eAGG~vtd~~G~~l~~~~~~-----~~~~~~iia  238 (252)
T d1lbva_         165 RMRIFGSAATELCFFADGSFDCFLDIRP-GKMLRIYDAAAGVFIAEKAGGKVTELDGESLGNKKFD-----MQERLNIVA  238 (252)
T ss_dssp             EEEBCSCHHHHHHHHHTTSSSEEEECCS-SCCBCHHHHHHHHHHHHHTTCEEECTTSCCCTTCBSS-----SCCCBCEEE
T ss_pred             heeehhhHHHHhhhhhhhhcchhhhccC-cccCcHHHHHHHHHHHHHCCCEEECCCCCCCcCCccc-----ccCCCEEEE
Confidence            24667875 7999999999999997653 2457899999999999999999999999999886521     224556889


Q ss_pred             eChHHHHHHHHHHh
Q 030461          156 TNDNLHHQIVEMIS  169 (177)
Q Consensus       156 a~~~~~~~i~~~l~  169 (177)
                      +|+.+|++++++|+
T Consensus       239 ~n~~l~~~ll~~lr  252 (252)
T d1lbva_         239 ANEKLHPKLLELIK  252 (252)
T ss_dssp             ECTTTHHHHHHHHC
T ss_pred             ECHHHHHHHHHHhC
Confidence            99999999999875

PyMOL of d1lbva_

>d2hhma_ e.7.1.1 (A:) Inositol monophosphatase {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1g0ha_ e.7.1.1 (A:) Archaeal inositol monophosphatase/fructose-1,6-bisphosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}	Back information, alignment and structure

>d1vdwa_ e.7.1.1 (A:) Archaeal inositol monophosphatase/fructose-1,6-bisphosphatase {Archaeon Pyrococcus horikoshii [TaxId: 53953]}	Back information, alignment and structure

>d1xi6a_ e.7.1.1 (A:) Archaeal inositol monophosphatase/fructose-1,6-bisphosphatase {Pyrococcus furiosus [TaxId: 2261]}	Back information, alignment and structure

>d1ka1a_ e.7.1.1 (A:) 3';5'-adenosine bisphosphatase, PAP phosphatase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1inpa_ e.7.1.1 (A:) Inositol polyphosphate 1-phosphatase {Cow (Bos taurus), brain [TaxId: 9913]}	Back information, alignment and structure

>d1jp4a_ e.7.1.1 (A:) PIPase {Rat (Rattus norvegicus) [TaxId: 10116]}	Back information, alignment and structure