BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>030462
MVKLLLFLLIFATATIFSHAGSSIISPTEIKSFEPKTVQFIAIQKIYPLQLQVAAKSCSY
TVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYD
ICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCRRGSGSAVV

High Scoring Gene Products

Symbol, full name Information P value
AT2G41475 protein from Arabidopsis thaliana 2.0e-47
AT5G62200 protein from Arabidopsis thaliana 5.2e-42
AT5G62210 protein from Arabidopsis thaliana 1.2e-26
ATS3
AT5G07190
protein from Arabidopsis thaliana 4.8e-23

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  030462
        (177 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:4515102981 - symbol:AT2G41475 "AT2G41475" spec...   496  2.0e-47   1
TAIR|locus:2167908 - symbol:AT5G62200 "AT5G62200" species...   445  5.2e-42   1
TAIR|locus:2167928 - symbol:AT5G62210 "AT5G62210" species...   300  1.2e-26   1
TAIR|locus:2182865 - symbol:ATS3 "AT5G07190" species:3702...   266  4.8e-23   1


>TAIR|locus:4515102981 [details] [associations]
            symbol:AT2G41475 "AT2G41475" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0009506 "plasmodesma"
            evidence=IDA] InterPro:IPR001024 GO:GO:0009506 EMBL:CP002685
            Gene3D:2.60.60.20 InterPro:IPR008976 SUPFAM:SSF49723 EMBL:AK175164
            EMBL:AK175615 EMBL:AK175765 EMBL:AK221826 EMBL:AK221888
            EMBL:AK228257 IPI:IPI00521526 RefSeq:NP_001118501.1
            UniGene:At.43627 ProteinModelPortal:Q681K2 PRIDE:Q681K2
            EnsemblPlants:AT2G41475.1 GeneID:6240499 KEGG:ath:AT2G41475
            TAIR:At2g41475 OMA:CYLYLLR PhylomeDB:Q681K2 ProtClustDB:CLSN2925507
            Genevestigator:Q681K2 InterPro:IPR010417 Pfam:PF06232
            Uniprot:Q681K2
        Length = 179

 Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
 Identities = 90/138 (65%), Positives = 108/138 (78%)

Query:    37 TVQFIAIQKIYPLQLQVAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLD 96
             T + + I    P      A +CSYTVIIKTSCSS SYTRDKIS++FGD YGNEVY+KRLD
Sbjct:    27 TTKPLPIDSFIPKPKLENAAACSYTVIIKTSCSSVSYTRDKISISFGDVYGNEVYVKRLD 86

Query:    97 DPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTF 156
             DP SRTFE CS+DT++ISGPC  D+CY YLLR GSDGWKPE+VKI G +IR+VTF+YN F
Sbjct:    87 DPSSRTFEKCSSDTYKISGPCMRDVCYLYLLRQGSDGWKPENVKIYGSSIRSVTFYYNLF 146

Query:   157 IPDGVWFGFNQCRRGSGS 174
             +P+ VW+GFN C  G G+
Sbjct:   147 LPNSVWYGFNVCN-GIGN 163


>TAIR|locus:2167908 [details] [associations]
            symbol:AT5G62200 "AT5G62200" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0031225 "anchored to
            membrane" evidence=TAS] [GO:0005774 "vacuolar membrane"
            evidence=IDA] [GO:0009611 "response to wounding" evidence=RCA]
            [GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA]
            InterPro:IPR001024 GO:GO:0005774 EMBL:CP002688 GO:GO:0031225
            Gene3D:2.60.60.20 InterPro:IPR008976 SUPFAM:SSF49723
            InterPro:IPR010417 Pfam:PF06232 EMBL:BT010895 EMBL:AK175131
            EMBL:AK176035 IPI:IPI00523516 RefSeq:NP_201026.1 UniGene:At.29064
            ProteinModelPortal:Q6NPM5 STRING:Q6NPM5 PRIDE:Q6NPM5
            EnsemblPlants:AT5G62200.1 GeneID:836341 KEGG:ath:AT5G62200
            OMA:NGPCTYQ ProtClustDB:CLSN2916759 Genevestigator:Q6NPM5
            Uniprot:Q6NPM5
        Length = 190

 Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
 Identities = 77/127 (60%), Positives = 95/127 (74%)

Query:    51 LQVAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDT 110
             +Q    +C+YTVII TSCSS  YTRD+IS+AFGD YGN++Y  RLDDP ++TFE CS+DT
Sbjct:    41 IQKLGNTCAYTVIISTSCSSTRYTRDQISVAFGDGYGNQIYAPRLDDPSTKTFEQCSSDT 100

Query:   111 FQISGPCTYDICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCRR 170
             FQI+GPCTY ICY YL RSG DGW P +VKI     + VTF YNT++P+ VW+GFN C  
Sbjct:   101 FQINGPCTYQICYVYLYRSGPDGWIPNTVKIYSHGSKAVTFPYNTYVPESVWYGFNYCNS 160

Query:   171 GSGSAVV 177
              S S V+
Sbjct:   161 ASDSNVL 167


>TAIR|locus:2167928 [details] [associations]
            symbol:AT5G62210 "AT5G62210" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0031225
            "anchored to membrane" evidence=TAS] [GO:0080167 "response to
            karrikin" evidence=IEP] [GO:0009611 "response to wounding"
            evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
            evidence=RCA] [GO:0009718 "anthocyanin-containing compound
            biosynthetic process" evidence=RCA] [GO:0009744 "response to
            sucrose stimulus" evidence=RCA] [GO:0010224 "response to UV-B"
            evidence=RCA] InterPro:IPR001024 EMBL:CP002688 GO:GO:0031225
            GO:GO:0080167 EMBL:AB019235 Gene3D:2.60.60.20 InterPro:IPR008976
            SUPFAM:SSF49723 InterPro:IPR010417 Pfam:PF06232 EMBL:AY086825
            IPI:IPI00532880 RefSeq:NP_201027.1 UniGene:At.8930
            ProteinModelPortal:Q9LVB5 SMR:Q9LVB5 PRIDE:Q9LVB5 ProMEX:Q9LVB5
            EnsemblPlants:AT5G62210.1 GeneID:836342 KEGG:ath:AT5G62210
            TAIR:At5g62210 InParanoid:Q9LVB5 OMA:HEEESCP PhylomeDB:Q9LVB5
            ProtClustDB:CLSN2687047 Genevestigator:Q9LVB5 Uniprot:Q9LVB5
        Length = 223

 Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
 Identities = 54/115 (46%), Positives = 77/115 (66%)

Query:    56 KSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRT--FESCSTDTFQI 113
             +SC YTVI+ TSC S  ++RD++++A GDA  N+V   RLD P S    FE CS+DTFQ+
Sbjct:    38 ESCPYTVIVTTSCFSPDWSRDQVTIALGDADDNQVVAPRLDKPLSGGGGFEKCSSDTFQV 97

Query:   114 SGPCTYDICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQC 168
              G C   IC  Y+ RSG+DGW PE+V+I  +  ++V F +N  +P+ +W+G N C
Sbjct:    98 KGKCLNTICSVYIYRSGTDGWIPETVEIYKEGSKSVKFDFNKNVPENIWYGNNYC 152


>TAIR|locus:2182865 [details] [associations]
            symbol:ATS3 "AT5G07190" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0009793 "embryo development ending in seed
            dormancy" evidence=RCA;TAS] [GO:0031225 "anchored to membrane"
            evidence=TAS] [GO:0016020 "membrane" evidence=IDA] [GO:0009737
            "response to abscisic acid stimulus" evidence=RCA] [GO:0009845
            "seed germination" evidence=RCA] [GO:0010162 "seed dormancy
            process" evidence=RCA] EMBL:CP002688 GO:GO:0031225 EMBL:AL163652
            GO:GO:0009793 InterPro:IPR008976 SUPFAM:SSF49723 InterPro:IPR010417
            Pfam:PF06232 ProtClustDB:CLSN2687047 IPI:IPI00523243 PIR:T48490
            RefSeq:NP_196336.1 UniGene:At.5049 ProteinModelPortal:Q9LYP6
            STRING:Q9LYP6 PRIDE:Q9LYP6 ProMEX:Q9LYP6 EnsemblPlants:AT5G07190.1
            GeneID:830610 KEGG:ath:AT5G07190 TAIR:At5g07190 OMA:SIEIYSE
            PhylomeDB:Q9LYP6 Genevestigator:Q9LYP6 Uniprot:Q9LYP6
        Length = 213

 Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
 Identities = 54/134 (40%), Positives = 78/134 (58%)

Query:    40 FIAIQKIYPLQL-QVAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDP 98
             FI +   + L + Q+   +C YTV++ TSC S   TRD+IS+ FGDA GN+VY  +L   
Sbjct:    15 FIFVTHAFDLSIIQMQQGTCPYTVVVMTSCLSPESTRDQISIVFGDADGNKVYAPKLGGL 74

Query:    99 YSRT--FESCSTDTFQISGPCTYD-ICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNT 155
                      CST+TFQ+ G C  D IC  Y+ R+G DGW PES++I  +  ++V F ++ 
Sbjct:    75 VRGPGGLGKCSTNTFQVRGQCLNDPICSLYINRNGPDGWVPESIEIYSEGSKSVKFDFSK 134

Query:   156 FIPD-GVWFGFNQC 168
              +P    W+G N C
Sbjct:   135 SVPQLNTWYGHNNC 148


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.135   0.417    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      177       163   0.00084  107 3  11 22  0.50    31
                                                     30  0.44    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  587 (62 KB)
  Total size of DFA:  157 KB (2094 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.48u 0.14s 16.62t   Elapsed:  00:00:01
  Total cpu time:  16.48u 0.14s 16.62t   Elapsed:  00:00:01
  Start:  Sat May 11 02:07:58 2013   End:  Sat May 11 02:07:59 2013

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