BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030467
(177 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8BZJ7|DCNL2_MOUSE DCN1-like protein 2 OS=Mus musculus GN=Dcun1d2 PE=2 SV=3
Length = 259
Score = 147 bits (371), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 108/166 (65%), Gaps = 7/166 (4%)
Query: 1 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLT 54
MHKL + +DK++QF++ T ASE+ A+ L ++W L+ A D F+ P++ KS
Sbjct: 1 MHKLKSAQKDKVRQFMACTQASERTAIYCLTQNEWKLDEATDSFFQNPEAFHRESMKSSV 60
Query: 55 DTRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
D + LE+LY+RYKDP + I +DGI C+DL +DP I +LV++W +AAT CEFSK+
Sbjct: 61 DQKKLEQLYSRYKDPQDENKIGIDGIQQFCDDLSLDPASISVLVIAWKFRAATQCEFSKK 120
Query: 114 EFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAK 159
EF+ G+ LG DS ++ + + + ELKD KF+++Y F F +AK
Sbjct: 121 EFVDGMTELGCDSTERLKALLPRLEQELKDPAKFKDLYQFTFTFAK 166
>sp|Q96GG9|DCNL1_HUMAN DCN1-like protein 1 OS=Homo sapiens GN=DCUN1D1 PE=1 SV=1
Length = 259
Score = 146 bits (369), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 106/166 (63%), Gaps = 7/166 (4%)
Query: 1 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ------SKSLT 54
M+KL S +DK++QF+ T +SEK A+ L +DW L+ A D F+ P+ K
Sbjct: 1 MNKLKSSQKDKVRQFMIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSL 60
Query: 55 DTRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
D + LE+LYNRYKDP + I +DGI C+DL +DP I +L+++W +AAT CEFSKQ
Sbjct: 61 DRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQ 120
Query: 114 EFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAK 159
EF+ G+ LG DS++K + +I M ELK+ +F++ Y F F +AK
Sbjct: 121 EFMDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAK 166
>sp|Q6PH85|DCNL2_HUMAN DCN1-like protein 2 OS=Homo sapiens GN=DCUN1D2 PE=1 SV=1
Length = 259
Score = 145 bits (365), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 104/166 (62%), Gaps = 7/166 (4%)
Query: 1 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLT 54
MHKL S +DK++QF++ T A E+ A+ L ++W L+ A D F+ P S ++
Sbjct: 1 MHKLKSSQKDKVRQFMACTQAGERTAIYCLTQNEWRLDEATDSFFQNPDSLHRESMRNAV 60
Query: 55 DTRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
D + LE LY RYKDP + I VDGI C+DL +DP I +LV++W +AAT CEFS++
Sbjct: 61 DKKKLERLYGRYKDPQDENKIGVDGIQQFCDDLSLDPASISVLVIAWKFRAATQCEFSRK 120
Query: 114 EFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAK 159
EF+ G+ LG DS++K + + + ELKD KF++ Y F F +AK
Sbjct: 121 EFLDGMTELGCDSMEKLKALLPRLEQELKDTAKFKDFYQFTFTFAK 166
>sp|Q5ZKU1|DCNL1_CHICK DCN1-like protein 1 OS=Gallus gallus GN=DCUN1D1 PE=2 SV=1
Length = 259
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 105/166 (63%), Gaps = 7/166 (4%)
Query: 1 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ------SKSLT 54
M+KL S +DK++QF+ T +SEK A+ L +DW L+ A D F+ P+ K
Sbjct: 1 MNKLKSSQKDKVRQFMVFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSL 60
Query: 55 DTRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
D + LE+LYNRYKDP + I +DGI C+DL +DP I +L+++W +AAT CEFSK
Sbjct: 61 DRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASITVLIIAWKFRAATQCEFSKL 120
Query: 114 EFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAK 159
EF+ G+ LG DS++K + +I M ELK+ +F++ Y F F +AK
Sbjct: 121 EFMDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAK 166
>sp|Q9QZ73|DCNL1_MOUSE DCN1-like protein 1 OS=Mus musculus GN=Dcun1d1 PE=2 SV=1
Length = 259
Score = 144 bits (363), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 105/166 (63%), Gaps = 7/166 (4%)
Query: 1 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ------SKSLT 54
M+KL S +DK++QF+ T +SEK A+ L +DW L+ A D F+ P+ K
Sbjct: 1 MNKLKSSQKDKVRQFMIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSL 60
Query: 55 DTRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
D + LE+LY RYKDP + I +DGI C+DL +DP I +L+++W +AAT CEFSKQ
Sbjct: 61 DRKKLEQLYTRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQ 120
Query: 114 EFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAK 159
EF+ G+ LG DS++K + +I M ELK+ +F++ Y F F +AK
Sbjct: 121 EFMDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAK 166
>sp|Q9VUQ8|DCN1L_DROME DCN1-like protein OS=Drosophila melanogaster GN=CG7427 PE=1 SV=2
Length = 288
Score = 117 bits (293), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 99/163 (60%), Gaps = 3/163 (1%)
Query: 1 MHKL-SRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLT-DTRH 58
M+KL S ++RDK+++F+S+T E+ A+ L+ +DW E A D ++ P+ D +
Sbjct: 1 MNKLKSSTHRDKVKKFISLTHTGEQTAIFCLQQNDWKFELASDNYFQNPEYYYRELDRKR 60
Query: 59 LEELYNRYKDPYLDM-ILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIG 117
+E+L+ RY+DP + I G+ DL + P ++L+++W A CEFS+ EFI
Sbjct: 61 IEQLFMRYRDPSDPLKIGSQGVIHFLEDLDLKPDSKLVLIIAWKFHAEVQCEFSRDEFIN 120
Query: 118 GLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKE 160
G+ LGIDS+DK + ++ + EL D KF++ Y+F F +AK+
Sbjct: 121 GMCDLGIDSIDKLKTKLPILEQELNDAGKFKDFYHFTFNYAKD 163
>sp|A4IHK8|DCNL3_XENTR DCN1-like protein 3 OS=Xenopus tropicalis GN=dcun1d3 PE=2 SV=1
Length = 303
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 87/162 (53%), Gaps = 11/162 (6%)
Query: 2 HKLSRSNRDKLQQFVSITG-ASEKAALQALKASDWHLE-------GAFDVFYSQPQSKSL 53
HK S S++D + +SI G AS + + K D LE G Q L
Sbjct: 28 HKRSSSHKD---EHLSICGKASREILVNGTKKGDVSLEASQPLAAGGDTKKKEQGTGAEL 84
Query: 54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
+ + +EEL+ RYKD D IL +G+ CNDL VDP + +LV++W +AATMC+F+++
Sbjct: 85 SSVQRIEELFWRYKDEREDAILEEGMERFCNDLYVDPTEFRVLVLAWKFQAATMCKFTRR 144
Query: 114 EFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAF 155
EF G +++ D ++ R + E K E KF+++Y F F
Sbjct: 145 EFFEGCKAINADGIEGICARFPSLLNEAKQEDKFKDLYRFTF 186
>sp|Q9U3C8|DCN1_CAEEL Defective in cullin neddylation protein 1 OS=Caenorhabditis elegans
GN=dcn-1 PE=1 SV=2
Length = 295
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 96/184 (52%), Gaps = 11/184 (5%)
Query: 1 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ------SKSLT 54
M++L + KL+QFV T +E +L L ++W++E A +++ P +
Sbjct: 1 MNRLKSDQKTKLRQFVQWTQVTEAVSLNFLAKANWNIEYAMTLYFDNPNLFAGSTPQPSV 60
Query: 55 DTRHLEELYNRYKDPYLDM----ILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEF 110
D ++E L+N+Y DP + + GI L DL + D +LV++W A T CEF
Sbjct: 61 DRSNIERLFNQYVDPKDKVGEKRMGPHGINRLLTDLGYEATDRRVLVLAWKFTAQTQCEF 120
Query: 111 SKQEFIGGLQSLGIDSLDKFRERISFMRAELK-DEQKFREIYNFAFAWAKEKVIVFLFLR 169
S E++ G+ +L D++ R+RI + + L+ D+ KF E+Y FAF +AK L L
Sbjct: 121 SLDEWVKGMTALQADTVQNLRQRIDSINSGLESDKAKFHELYLFAFNYAKSAACRNLDLE 180
Query: 170 ISTC 173
+ C
Sbjct: 181 TAIC 184
>sp|Q8K0V2|DCNL3_MOUSE DCN1-like protein 3 OS=Mus musculus GN=Dcun1d3 PE=2 SV=1
Length = 304
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 64/99 (64%)
Query: 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFI 116
+ LEEL+ RYKD D IL +G+ CNDL VDP + +L+++W +AATMC+F+++EF
Sbjct: 89 QRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEFF 148
Query: 117 GGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAF 155
G +++ DS+D R + E K E KF+++Y F F
Sbjct: 149 DGCKAISADSIDGICARFPSLLTEAKQEDKFKDLYRFTF 187
>sp|Q5E9V1|DCNL3_BOVIN DCN1-like protein 3 OS=Bos taurus GN=DCUN1D3 PE=2 SV=1
Length = 304
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
Query: 47 QPQSKSLTDT-RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAA 105
+P+S + + + LEEL+ RYKD D IL +G+ CNDL VDP + +L+++W +AA
Sbjct: 78 EPKSNAEESSLQRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAA 137
Query: 106 TMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAF 155
TMC+F+++EF G +++ DS+D R + E K E KF+++Y F F
Sbjct: 138 TMCKFTRKEFFDGCKAISADSIDGICARFPSLLTEAKQEDKFKDLYRFTF 187
>sp|Q4V8B2|DCNL3_RAT DCN1-like protein 3 OS=Rattus norvegicus GN=Dcun1d3 PE=2 SV=1
Length = 304
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 64/99 (64%)
Query: 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFI 116
+ LEEL+ RYKD D IL +G+ CNDL VDP + +L+++W +AATMC+F+++EF
Sbjct: 89 QRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEFF 148
Query: 117 GGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAF 155
G +++ DS+D R + E K E KF+++Y F F
Sbjct: 149 DGCKAISADSIDGICARFPSLLTEAKQEDKFKDLYRFTF 187
>sp|Q8IWE4|DCNL3_HUMAN DCN1-like protein 3 OS=Homo sapiens GN=DCUN1D3 PE=1 SV=1
Length = 304
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 64/99 (64%)
Query: 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFI 116
+ LEEL+ RYKD D IL +G+ CNDL VDP + +L+++W +AATMC+F+++EF
Sbjct: 89 QRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEFF 148
Query: 117 GGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAF 155
G +++ DS+D R + E K E KF+++Y F F
Sbjct: 149 DGCKAISADSIDGICARFPSLLTEAKQEDKFKDLYRFTF 187
>sp|Q5R9G1|DCNL3_PONAB DCN1-like protein 3 OS=Pongo abelii GN=DCUN1D3 PE=2 SV=1
Length = 304
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 64/99 (64%)
Query: 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFI 116
+ LEEL+ RYKD D IL +G+ CNDL VDP + +L+++W +AATMC+F+++EF
Sbjct: 89 QRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEFF 148
Query: 117 GGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAF 155
G +++ DS+D R + E K E KF+++Y F F
Sbjct: 149 DGCKAISADSIDGICARFPSLLTEAKQEDKFKDLYRFTF 187
>sp|Q6DFA1|DCNL3_XENLA DCN1-like protein 3 OS=Xenopus laevis GN=dcun1d3 PE=2 SV=1
Length = 303
Score = 93.2 bits (230), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 11/165 (6%)
Query: 2 HKLSRSNRDKLQQFVSITG-ASEKAALQALKASDWHLEGAFDVFYS-------QPQSKSL 53
HK S S++ ++ +SI G AS + + K D LE + + Q L
Sbjct: 28 HKRSSSHK---EEHMSICGKASGEILVNGTKKGDASLEASQPLAVGVDTKKKEQGVGAEL 84
Query: 54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
+ + +EEL+ RYKD D IL +G+ C+DL VDP + +LV++W +AATMC+F+++
Sbjct: 85 SSLQRIEELFRRYKDEREDAILEEGMERFCDDLCVDPTEFRVLVLAWKFQAATMCKFTRR 144
Query: 114 EFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWA 158
EF G +S+ D ++ + + E K E KF+++Y F F +
Sbjct: 145 EFFEGCKSINADGIESICSQFPGLLNEAKQEDKFKDLYRFTFQFG 189
>sp|Q60YT5|DCN1_CAEBR Defective in cullin neddylation protein 1 OS=Caenorhabditis
briggsae GN=dcn-1 PE=3 SV=3
Length = 367
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 89/171 (52%), Gaps = 9/171 (5%)
Query: 12 LQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ-----SKSLTDTRHLEELYNRY 66
L+QFV T A+E +L L ++W++E A ++Y P + + D +L+ +Y
Sbjct: 87 LRQFVQWTQATEPVSLNFLAKANWNIEYAMTLYYDNPNLFSSSAPATVDQSKTIQLFTQY 146
Query: 67 ---KDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG 123
+D + I G+ L DL +P D +L+++W KA T CEFS QEF G+ SL
Sbjct: 147 VDKRDGLGERIGPHGMQRLLIDLGYEPIDRRVLILAWVFKAETQCEFSLQEFTNGMASLQ 206
Query: 124 IDSLDKFRERISFMRAELK-DEQKFREIYNFAFAWAKEKVIVFLFLRISTC 173
+DS+ +++I + A +K D K R++ F F + K L L ++ C
Sbjct: 207 VDSIQGLKQKIDALDAGMKADLTKTRDLCIFTFNYGKSAASRSLDLEMAIC 257
>sp|Q5RHX6|DCNL4_DANRE DCN1-like protein 4 OS=Danio rerio GN=dcun1d4 PE=2 SV=2
Length = 280
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 65/105 (61%)
Query: 72 DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFR 131
D++ +G+ C D+ V+P+++VMLV++W + A +M F+ QE++ G+ SL DS +K R
Sbjct: 106 DVVGPEGMEKFCEDIGVEPENVVMLVLAWKLDAQSMGYFTLQEWLKGMGSLQCDSTEKLR 165
Query: 132 ERISFMRAELKDEQKFREIYNFAFAWAKEKVIVFLFLRISTCKLS 176
+ ++R+ L D F+ IY +AF +A+EK L L + C L
Sbjct: 166 NSLDYLRSVLNDATSFKLIYRYAFDFAREKDQRSLDLNTAKCMLG 210
>sp|Q1RMX9|DCNL5_BOVIN DCN1-like protein 5 OS=Bos taurus GN=DCUN1D5 PE=2 SV=1
Length = 236
Score = 80.5 bits (197), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 73/121 (60%), Gaps = 6/121 (4%)
Query: 46 SQPQSKSLTDTRHLEE-----LYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSW 100
SQP ++ ++ H + Y P +++ +G+ C D+ V+P++I+MLV++W
Sbjct: 32 SQPPARLISGEEHFSSKKCLAWFYEYAGP-DEVVGPEGMEKFCEDIGVEPENIIMLVLAW 90
Query: 101 HMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKE 160
++A +M F+K+E++ G+ SL D +K + + F+R++L D F+ IY +AF +A++
Sbjct: 91 KLEAESMGFFTKEEWLKGMTSLQCDCTEKLQNKFDFLRSQLNDISSFKNIYRYAFDFARD 150
Query: 161 K 161
K
Sbjct: 151 K 151
>sp|Q9BTE7|DCNL5_HUMAN DCN1-like protein 5 OS=Homo sapiens GN=DCUN1D5 PE=1 SV=1
Length = 237
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 73/121 (60%), Gaps = 6/121 (4%)
Query: 46 SQPQSKSLTDTRHLEE-----LYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSW 100
SQP ++ ++ H + Y P +++ +G+ C D+ V+P++I+MLV++W
Sbjct: 33 SQPPARLISGEEHFSSKKCLAWFYEYAGP-DEVVGPEGMEKFCEDIGVEPENIIMLVLAW 91
Query: 101 HMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKE 160
++A +M F+K+E++ G+ SL D +K + + F+R++L D F+ IY +AF +A++
Sbjct: 92 KLEAESMGFFTKEEWLKGMTSLQCDCTEKLQNKFDFLRSQLNDISSFKNIYRYAFDFARD 151
Query: 161 K 161
K
Sbjct: 152 K 152
>sp|Q5RDF9|DCNL5_PONAB DCN1-like protein 5 OS=Pongo abelii GN=DCUN1D5 PE=2 SV=1
Length = 237
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 73/121 (60%), Gaps = 6/121 (4%)
Query: 46 SQPQSKSLTDTRHLEE-----LYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSW 100
SQP ++ ++ H + Y P +++ +G+ C D+ V+P++I+MLV++W
Sbjct: 33 SQPPARLISGEEHFSSKKCLAWFYEYAGP-DEVVGPEGMEKFCEDIGVEPENIIMLVLAW 91
Query: 101 HMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKE 160
++A +M F+K+E++ G+ SL D +K + + F+R++L D F+ IY +AF +A++
Sbjct: 92 KLEAESMGFFTKEEWLKGMTSLQCDCTEKLQNKFDFLRSQLNDISSFKNIYRYAFDFARD 151
Query: 161 K 161
K
Sbjct: 152 K 152
>sp|Q92564|DCNL4_HUMAN DCN1-like protein 4 OS=Homo sapiens GN=DCUN1D4 PE=1 SV=2
Length = 292
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 64/105 (60%)
Query: 72 DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFR 131
D++ +G+ C D+ V+P+++VMLV++W + A M F+ QE++ G+ SL D+ +K R
Sbjct: 118 DVVGPEGMEKFCEDIGVEPENVVMLVLAWKLDAQNMGYFTLQEWLKGMTSLQCDTTEKLR 177
Query: 132 ERISFMRAELKDEQKFREIYNFAFAWAKEKVIVFLFLRISTCKLS 176
+ ++R+ L D F+ IY +AF +A+EK L + + C L
Sbjct: 178 NTLDYLRSFLNDSTNFKLIYRYAFDFAREKDQRSLDINTAKCMLG 222
>sp|Q8CCA0|DCNL4_MOUSE DCN1-like protein 4 OS=Mus musculus GN=Dcun1d4 PE=2 SV=1
Length = 292
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 63/105 (60%)
Query: 72 DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFR 131
D + +G+ C D+ V+P+++VMLV++W + A M F+ QE++ G+ SL D+ +K R
Sbjct: 118 DAVGPEGMEKFCEDIGVEPENVVMLVLAWKLDAQNMGYFTLQEWLKGMTSLQCDTTEKLR 177
Query: 132 ERISFMRAELKDEQKFREIYNFAFAWAKEKVIVFLFLRISTCKLS 176
+ ++R+ L D F+ IY +AF +A+EK L + + C L
Sbjct: 178 TTLDYLRSLLNDTTNFKLIYRYAFDFAREKDQRSLDINTAKCMLG 222
>sp|Q9CXV9|DCNL5_MOUSE DCN1-like protein 5 OS=Mus musculus GN=Dcun1d5 PE=2 SV=1
Length = 237
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 62/90 (68%)
Query: 72 DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFR 131
+++ +G+ C D+ V+P++I+MLV++W ++A +M F+K+E++ G+ SL D +K +
Sbjct: 63 EVVGPEGMEKFCEDIGVEPENIIMLVLAWKLEAESMGFFTKEEWLKGMTSLQCDCTEKLQ 122
Query: 132 ERISFMRAELKDEQKFREIYNFAFAWAKEK 161
R F+R++L D F+ IY +AF +A++K
Sbjct: 123 SRFDFLRSQLNDISSFKNIYRYAFDFARDK 152
>sp|Q5PPL2|DCNL5_RAT DCN1-like protein 5 OS=Rattus norvegicus GN=Dcun1d5 PE=2 SV=1
Length = 237
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 62/90 (68%)
Query: 72 DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFR 131
+++ +G+ C D+ V+P++I+MLV++W ++A +M F+K+E++ G+ SL D +K +
Sbjct: 63 EVVGPEGMEKFCEDIGVEPENIIMLVLAWKLEAESMGFFTKEEWLKGMTSLQCDCTEKLQ 122
Query: 132 ERISFMRAELKDEQKFREIYNFAFAWAKEK 161
R F+R++L D F+ IY +AF +A++K
Sbjct: 123 SRFDFLRSQLNDISSFKNIYRYAFDFARDK 152
>sp|P0CN06|DCN1_CRYNJ Defective in cullin neddylation protein 1 OS=Cryptococcus
neoformans var. neoformans serotype D (strain JEC21 /
ATCC MYA-565) GN=DCN1 PE=3 SV=1
Length = 279
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 87/162 (53%), Gaps = 10/162 (6%)
Query: 7 SNRDKL--QQFVSITGASEKAALQALKASDWHLEGAFDVFYS-QPQSKS-LTDTRHLEEL 62
S +D L QF +ITG S A + +K H+E A D FY+ +P ++ R L E+
Sbjct: 9 STKDSLLVTQFRAITGTSSAEAAKYIKRYK-HIEAAVDAFYNNEPAPRADPAQERKLGEI 67
Query: 63 YNRYKDPY-LDMILVDGITLLCNDLQVDP-QDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120
+ ++KDP +I +DG LC +L +DP D V+ ++ + + E+ K F+ G+
Sbjct: 68 WEKFKDPSDPKLIKIDGTMELCEELDIDPGTDAVLFCLAADLGSKATGEWEKAPFVAGIA 127
Query: 121 SL--GIDSLDKFRERISFMRAEL-KDEQKFREIYNFAFAWAK 159
S IDSL K + + +R +L D + F+++YN AF A+
Sbjct: 128 SYPGNIDSLPKLKAYLPTLRKKLVSDPEYFKKVYNHAFQLAR 169
>sp|P0CN07|DCN1_CRYNB Defective in cullin neddylation protein 1 OS=Cryptococcus
neoformans var. neoformans serotype D (strain B-3501A)
GN=DCN1 PE=3 SV=1
Length = 279
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 87/162 (53%), Gaps = 10/162 (6%)
Query: 7 SNRDKL--QQFVSITGASEKAALQALKASDWHLEGAFDVFYS-QPQSKS-LTDTRHLEEL 62
S +D L QF +ITG S A + +K H+E A D FY+ +P ++ R L E+
Sbjct: 9 STKDSLLVTQFRAITGTSSAEAAKYIKRYK-HIEAAVDAFYNNEPAPRADPAQERKLGEI 67
Query: 63 YNRYKDPY-LDMILVDGITLLCNDLQVDP-QDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120
+ ++KDP +I +DG LC +L +DP D V+ ++ + + E+ K F+ G+
Sbjct: 68 WEKFKDPSDPKLIKIDGTMELCEELDIDPGTDAVLFCLAADLGSKATGEWEKAPFVAGIA 127
Query: 121 SL--GIDSLDKFRERISFMRAEL-KDEQKFREIYNFAFAWAK 159
S IDSL K + + +R +L D + F+++YN AF A+
Sbjct: 128 SYPGNIDSLPKLKAYLPTLRKKLVSDPEYFKKVYNHAFQLAR 169
>sp|Q54GP1|DCN1L_DICDI DCN1-like protein 1 OS=Dictyostelium discoideum GN=DDB_G0290025
PE=3 SV=1
Length = 249
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 84/165 (50%), Gaps = 8/165 (4%)
Query: 1 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS-KSLTDTRHL 59
M++L + K +F+SIT A+E A+Q LK + W + A D FYS P + + D + +
Sbjct: 1 MYRLPADQKLKCTEFMSITEATEAKAIQYLKDASWRTDAAVDNFYSNPSNFANKFDKKAI 60
Query: 60 EELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL 119
E ++N+YKD + I + + D+ ++ + ++ L V W K M +K EF+ +
Sbjct: 61 ETIFNKYKDSGEEQI-SEKLPEFVKDININDE-MMELAVLWKFKTKQMGVITKNEFMETM 118
Query: 120 QSLGIDSLDKFRERISFMR-----AELKDEQKFREIYNFAFAWAK 159
+ L D++ +++ +R +L + F+E Y F F K
Sbjct: 119 ERLRCDNISSLEKQMETVRQQLSSKDLNNNSAFKEFYMFVFDLGK 163
>sp|Q4PF67|DCN1_USTMA Defective in cullin neddylation protein 1 OS=Ustilago maydis
(strain 521 / FGSC 9021) GN=DCN1 PE=3 SV=1
Length = 319
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 86/167 (51%), Gaps = 30/167 (17%)
Query: 12 LQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ-------SKSLTDTR------- 57
L+QF +T A+ + A + LKA + +E A D F++ Q S S D +
Sbjct: 11 LRQFRQLTNATPQDANRILKAHGYRIEPATDAFFNNEQAQINASISSSTLDRKSEREVKE 70
Query: 58 HLEELYNRYKDPYLD---------------MILVDGITLLCNDLQVDPQDIVMLVVSWHM 102
L L++R++D D +I + G +C L+V P+D+V L +S+++
Sbjct: 71 RLNALFDRFRDAGADSDEEDDEASQPEDRDLISIGGALKMCEALEVSPEDVVFLPLSYYL 130
Query: 103 KAATMCEFSKQEFIGGLQSLGI-DSLDKFRERISFMRAELKDEQKFR 148
K+A+M F+++ +I G + L + D++DK ++ + +R EL D + R
Sbjct: 131 KSASMGTFTREGYINGWKMLDLSDTIDKQKKTLEKLRQELLDNKPLR 177
>sp|Q86JM4|DCN1M_DICDI DCN1-like protein 2 OS=Dictyostelium discoideum GN=DDB_G0272016
PE=4 SV=1
Length = 267
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 49 QSKSLTDTRHLEELYNRYKDPYLD---MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAA 105
+ K++ H LY + +LD I +GI C+D+ + P +LV++W M A+
Sbjct: 66 KGKNIIKAIHYTYLYTYIFNVHLDDDETIGPEGIARFCSDIGLAPDSFEILVLAWTMNAS 125
Query: 106 TMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELK-DEQKFREIYNFAFAWAKE 160
M FSK EF G + L L +++++ +LK D KF ++Y +AF +A E
Sbjct: 126 KMGYFSKNEFSSGFEKLQCSDLSTLKKQLNSTSQKLKHDSTKFTDLYKYAFGFASE 181
>sp|Q6C0B6|DCN1_YARLI Defective in cullin neddylation protein 1 OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=DCN1 PE=3 SV=1
Length = 240
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 78/153 (50%), Gaps = 17/153 (11%)
Query: 11 KLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPY 70
++++ ++ TG+ EK A AL+ DW++E A D + PQ D +++++Y++
Sbjct: 10 EIRRVMTFTGSKEKTARDALEKFDWNVEVAIDHILNTPQ----VDLSGASKVFDKYRNAD 65
Query: 71 LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLD-- 128
D I +DG DL + ++ +L V+ + ++ F+++ F+ G ++G D+L
Sbjct: 66 SDEIDLDGTIQYITDLGLSLEEPTVLAVAMTAGSPSVGTFTRKPFVEGWAAIGGDTLPAQ 125
Query: 129 -----KFRERISFMRAELKDEQKFREIYNFAFA 156
F E ++ + A+ F++IY F +
Sbjct: 126 QKLCRSFAESMTSLNAD------FQKIYKFTYG 152
>sp|Q5AWS1|DCN1_EMENI Defective in cullin neddylation protein 1 OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=dcn1 PE=3 SV=1
Length = 308
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 82/200 (41%), Gaps = 44/200 (22%)
Query: 1 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ--PQSKSL----T 54
M + + + ++ QFVS T A+ A + L+ S W+ E A D F ++ P S L
Sbjct: 1 MPPYTAAQKQQITQFVSFTQANNTTAAKFLRQSRWNTEEAIDAFKNRIAPASMGLIFRPC 60
Query: 55 DTRHLEE----------------------------------LYNRYKDP---YLDMILVD 77
T + E L ++D D I ++
Sbjct: 61 ATAGVREAVLRISIFQKLIPGLPAGNDALADWVLYLYGFTFLLKEFRDSPEENPDTIGIE 120
Query: 78 GITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFM 137
G D++V+ ++ L ++ +++ +M EF+++ F+ G +S+ DS+ K + +
Sbjct: 121 GAMRYLGDIEVELDEVTCLAIAELLQSPSMGEFTREGFLNGWRSVQCDSIAKMAAHAANL 180
Query: 138 RAELKDEQK-FREIYNFAFA 156
R + E FR +Y + F
Sbjct: 181 RTRIPSEPDLFRRVYRYTFP 200
>sp|Q8WZK4|DCN1_SCHPO Defective in cullin neddylation protein 1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=dcn1 PE=3 SV=1
Length = 251
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 12/154 (7%)
Query: 15 FVSITGASEKAALQALKASDWHLEGAFDVFYSQ-PQSKSLTDT-RHLEELYNRYKDPY-L 71
F T S KAAL LK ++ +DV Y++ Q KS + + L +++++
Sbjct: 12 FSKATSTSSKAALSWLKKYNFD----YDVAYTKWIQQKSREEAEKQLNNVFSQFSSKEDK 67
Query: 72 DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKF- 130
D+I +DG L L + +D L+VS+ +K+ M EF ++ F+ G +L SLD+
Sbjct: 68 DLIELDGSVQLFTALDISLEDPETLLVSYFLKSPRMGEFHRESFVEGALNLSTTSLDQLK 127
Query: 131 ---RERISFMRAELKDEQKFREIYNFAFAWAKEK 161
+E++ R++ QK IY + A K K
Sbjct: 128 LAIKEKVQVWRSD-ASLQKAIYIYTYPLACDKGK 160
>sp|Q52DM9|DCN1_MAGO7 Defective in cullin neddylation protein 1 OS=Magnaporthe oryzae
(strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=DCN1 PE=3
SV=1
Length = 281
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 75/154 (48%), Gaps = 7/154 (4%)
Query: 14 QFVSITGASEKAALQALKASDWHLEGAFDVFY-SQPQ-SKSLTDTRHLEELYNRYKDPYL 71
QFV +T ++K A + LK ++W L+ A D ++ S P + S + L+++++ +D
Sbjct: 13 QFVHMTATNDKVAQKFLKNANWKLDIAADAYFNSNPNMATSSSSKPKLDKMFSDLQDTQE 72
Query: 72 DMI--LVDGITL-LCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLD 128
D L G + + L VDP+ + + V+ +KA ++ F+ G Q+ +
Sbjct: 73 DSPDELGAGSAIEYASSLGVDPESVGIFVLMELVKAPAFGVITRSGFVEGWQATNAPASK 132
Query: 129 KFRERI--SFMRAELKDEQKFREIYNFAFAWAKE 160
++ S +R +D + F+ +Y AF +E
Sbjct: 133 SGQKDYIQSVIRNLPQDHELFKRVYRHAFIAGRE 166
>sp|Q5ADL9|DCN1_CANAL Defective in cullin neddylation protein 1 OS=Candida albicans
(strain SC5314 / ATCC MYA-2876) GN=DCN1 PE=3 SV=1
Length = 304
Score = 37.4 bits (85), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 83/184 (45%), Gaps = 29/184 (15%)
Query: 6 RSNRDKL-QQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLE---- 60
+S++ +L QQF +TG S A + L++ + L A D +Y++ +K+ + ++
Sbjct: 9 KSSKTQLRQQFCELTGTSNTTATKYLESVRYDLARAIDNYYNKHPNKAQVTKKPVKVKID 68
Query: 61 ----ELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEF 115
+++++YKD + I ++G DL + P I L ++ +K+ F+++ F
Sbjct: 69 DRLIQIFDKYKDSEDPNKIDIEGTLTYLGDLGISPDQIESLSLALLLKSPKTGVFTRENF 128
Query: 116 IGGLQSLGIDSLDKFRERISFMRAEL--------------KDEQ-----KFREIYNFAFA 156
+ Q + E I+ +L DE KF+++YNF F
Sbjct: 129 LHIWQYYQCFDIGAMSEFITRFNKDLVNNIGGFKDISTVSDDENKSVPLKFQDLYNFTFK 188
Query: 157 WAKE 160
++ E
Sbjct: 189 FSLE 192
>sp|F1NW29|TYDP2_CHICK Tyrosyl-DNA phosphodiesterase 2 OS=Gallus gallus GN=TDP2 PE=3
SV=2
Length = 369
Score = 36.2 bits (82), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 27/52 (51%)
Query: 3 KLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLT 54
+L++ + +F ++T + E A L S WHLE A D ++ P ++ T
Sbjct: 28 RLAKRRKVLCSEFAAVTSSDEAVASGFLAGSGWHLERALDAYFEAPMNEQTT 79
>sp|Q750Y3|DCN1_ASHGO Defective in cullin neddylation protein 1 OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=DCN1 PE=3 SV=2
Length = 255
Score = 35.4 bits (80), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 68/153 (44%), Gaps = 6/153 (3%)
Query: 8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTD--TRHLEELYNR 65
R+ +++F+++T A+ AA L+ + W L+ A D FY+Q + + L + R
Sbjct: 6 QRELIREFLAVTSATSAAAETYLERNHWSLDHALDDFYTQSGGGGRAEQYSAELVATFER 65
Query: 66 YKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATM-CEFSKQEFIGGLQSLGI 124
Y + + + DL +D+ L ++ +K + + S+ +F+ LG
Sbjct: 66 YAAG--GAMDTEALVRYVGDLGFQLEDVATLCLARLLKVEELTADISRFQFLSTWHGLGC 123
Query: 125 DSLDKFRERISFMRAELK-DEQKFREIYNFAFA 156
SL R + + L+ D FR +Y + F
Sbjct: 124 SSLPDMRAAVDALELRLRTDAAYFRALYAYTFG 156
>sp|Q12395|DCN1_YEAST Defective in cullin neddylation protein 1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=DCN1 PE=1
SV=1
Length = 269
Score = 34.7 bits (78), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/167 (19%), Positives = 77/167 (46%), Gaps = 18/167 (10%)
Query: 3 KLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTD------- 55
K + ++ ++ F S+T K + + L+ + W++ A + +Y + + + TD
Sbjct: 9 KDASPEQEAIESFTSLTKCDPKVSRKYLQRNHWNINYALNDYYDK-EIGTFTDEVSTVAH 67
Query: 56 ----TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCE-- 109
+ L +++ Y + ++ +D + +L + +D+ L ++ H+ E
Sbjct: 68 PPVYPKELTQVFEHYINN--NLFDIDSLVKFIEELGYNLEDLATLCLA-HLLGYKKLEEP 124
Query: 110 FSKQEFIGGLQSLGIDSLDKFRERISFMRAEL-KDEQKFREIYNFAF 155
+++F+ G ++ +E I + +L +D Q F +IYN+AF
Sbjct: 125 LKREDFLSTWFMQGCSTISDMQECIKTLDVKLHEDLQYFTQIYNYAF 171
>sp|Q9XWG3|TYDP2_CAEEL 5'-tyrosyl-DNA phosphodiesterase OS=Caenorhabditis elegans
GN=Y63D3A.4 PE=1 SV=1
Length = 362
Score = 34.7 bits (78), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 22/42 (52%)
Query: 5 SRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYS 46
S S+ KL +F IT E A L+ DW L+ A DVFY
Sbjct: 42 SMSDEQKLHEFAIITATDEAFAQSILQDVDWDLKKALDVFYG 83
>sp|B8FB83|PURA_DESAA Adenylosuccinate synthetase OS=Desulfatibacillum alkenivorans
(strain AK-01) GN=purA PE=3 SV=1
Length = 430
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 92 DIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI-DSLDKFRERISFMRAELKDEQKFREI 150
D+V+L + + T +K + +GGL SL I + + E ++F A+LK K + +
Sbjct: 311 DMVLLEATARLNGLTGVAITKLDVLGGLDSLNICTAYECEGETLNFFPADLKVLAKCKPV 370
Query: 151 YNFAFAWAKE 160
Y W ++
Sbjct: 371 YETMPGWTED 380
>sp|A9L9E4|NU5C_LEMMI NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Lemna
minor GN=ndhF PE=3 SV=1
Length = 742
Score = 31.6 bits (70), Expect = 2.5, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 11/76 (14%)
Query: 8 NRDKLQQFVSITGASEKAALQALK--ASDW-HLEGAFDVFYSQPQSKSLTDTRHLEELYN 64
N D + V I +++ +L + +W H G D+FY+ ++S+ + L + ++
Sbjct: 630 NLDLMNLLVKIGTKTKRVSLDKIANIVYNWSHNRGYIDIFYTNVVTQSIRELAKLTQFFD 689
Query: 65 RYKDPYLDMILVDGIT 80
RY ++DGIT
Sbjct: 690 RY--------IIDGIT 697
>sp|O35987|NSF1C_RAT NSFL1 cofactor p47 OS=Rattus norvegicus GN=Nsfl1c PE=1 SV=1
Length = 370
Score = 31.2 bits (69), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 4 LSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFY 45
++ +D L++FV++TGA E A L+++ W L+ A FY
Sbjct: 1 MAEERQDALREFVAVTGAEEDRARFFLESAGWDLQIALASFY 42
>sp|Q3SZC4|NSF1C_BOVIN NSFL1 cofactor p47 OS=Bos taurus GN=NSFL1C PE=2 SV=1
Length = 370
Score = 30.8 bits (68), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFY 45
+D L++FV++TGA E A L+++ W L+ A FY
Sbjct: 6 QDALREFVAVTGAEEDRARFFLESAGWDLQIALASFY 42
>sp|A6VNL0|PURR_ACTSZ HTH-type transcriptional repressor PurR OS=Actinobacillus
succinogenes (strain ATCC 55618 / 130Z) GN=purR PE=3
SV=1
Length = 336
Score = 30.8 bits (68), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 17/110 (15%)
Query: 40 AFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDP-------QD 92
+ +F Q+ HLE L + VDGI ++C++ D D
Sbjct: 89 GYSLFLCNTQNNPEKIKNHLEMLAKKR---------VDGILVMCSEYTADSLDLMKSFSD 139
Query: 93 IVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELK 142
+ M+V+ W F GG + G +D + I+++ AELK
Sbjct: 140 LPMVVMDWGPVNPNTDRILDNSFEGGYLA-GKHLVDNGHKEIAYLSAELK 188
>sp|A8XU68|TYDP2_CAEBR 5'-tyrosyl-DNA phosphodiesterase OS=Caenorhabditis briggsae
GN=CBG18823 PE=3 SV=2
Length = 337
Score = 30.4 bits (67), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 6 RSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRH 58
+S+ K+++F IT E A L+ W L+ A DVF+ S + +TR+
Sbjct: 31 QSDEAKMREFAEITATDEIMAQSILQDVGWDLKRALDVFFG---SDAFKETRN 80
>sp|A3DM71|KTHY_STAMF Probable thymidylate kinase OS=Staphylothermus marinus (strain
ATCC 43588 / DSM 3639 / F1) GN=tmk PE=3 SV=1
Length = 199
Score = 30.0 bits (66), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 17 SITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMI 74
I GA + + A K D+ +E F+V Y+ +L L++ YN Y+D YLD +
Sbjct: 13 GIDGAGKTSI--AFKLRDFLVEKGFNVHYTYEPYNTLY-VEALKKKYNEYRDAYLDAL 67
>sp|A5N4D3|PURA_CLOK5 Adenylosuccinate synthetase OS=Clostridium kluyveri (strain ATCC
8527 / DSM 555 / NCIMB 10680) GN=purA PE=3 SV=1
Length = 428
Score = 30.0 bits (66), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 92 DIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRER-ISFMRAELKDEQKFREI 150
D+V+L S + T +K + +GGL+ + + + KF + I ++ A L+D K +
Sbjct: 312 DLVILKTSSRVSGLTNFAITKIDTLGGLEKVKVCTGYKFNGKIIDYVPASLQDLAKCEPV 371
Query: 151 YNFAFAWAKE 160
Y W K+
Sbjct: 372 YEEFDGWDKD 381
>sp|Q5ZK10|NSF1C_CHICK NSFL1 cofactor p47 OS=Gallus gallus GN=NSFL1C PE=2 SV=1
Length = 369
Score = 29.6 bits (65), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 10 DKLQQFVSITGASEKAALQALKASDWHLEGAFDVFY 45
+ L++FV++TGA E+ A L+++ W L+ A FY
Sbjct: 6 EALREFVAVTGAEEERARFFLESAGWDLQIALASFY 41
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,700,294
Number of Sequences: 539616
Number of extensions: 2172689
Number of successful extensions: 8222
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 8153
Number of HSP's gapped (non-prelim): 63
length of query: 177
length of database: 191,569,459
effective HSP length: 110
effective length of query: 67
effective length of database: 132,211,699
effective search space: 8858183833
effective search space used: 8858183833
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 57 (26.6 bits)