BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030481
(176 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|302142363|emb|CBI19566.3| unnamed protein product [Vitis vinifera]
Length = 324
Score = 303 bits (775), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 153/189 (80%), Positives = 162/189 (85%), Gaps = 19/189 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSS GGYASNGA QS+GDS NTTIFV
Sbjct: 142 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSHGGYASNGA---SVQSDGDSMNTTIFV 198
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV+DEDLRQPFSQYGEI SVKIPVGKGCGFVQFANR NAE+AL KLNGTVIGKQ+
Sbjct: 199 GGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEDALQKLNGTVIGKQT 258
Query: 121 -------------FRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 167
RAD+GNQWSGAYYGGQVYDGYGYA+PPP+DP+MY AAAYGAYPV
Sbjct: 259 VRLSWGRNPANKQMRADFGNQWSGAYYGGQVYDGYGYALPPPHDPTMY---AAAYGAYPV 315
Query: 168 YGSHQQQVS 176
YG+HQQQVS
Sbjct: 316 YGNHQQQVS 324
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQF 98
G + + + +IFVG L +V+D L + F+ +Y + + K+ KG GFV+F
Sbjct: 73 GDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRF 132
Query: 99 ANRENAEEALHKLNGTVIGKQSFR 122
+ +A+ ++NG + R
Sbjct: 133 GDENERSQAMTEMNGVYCSSRPMR 156
>gi|359492060|ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Vitis vinifera]
Length = 418
Score = 302 bits (774), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 153/189 (80%), Positives = 162/189 (85%), Gaps = 19/189 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSS GGYASNGA QS+GDS NTTIFV
Sbjct: 236 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSHGGYASNGA---SVQSDGDSMNTTIFV 292
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV+DEDLRQPFSQYGEI SVKIPVGKGCGFVQFANR NAE+AL KLNGTVIGKQ+
Sbjct: 293 GGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEDALQKLNGTVIGKQT 352
Query: 121 -------------FRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 167
RAD+GNQWSGAYYGGQVYDGYGYA+PPP+DP+MY AAAYGAYPV
Sbjct: 353 VRLSWGRNPANKQMRADFGNQWSGAYYGGQVYDGYGYALPPPHDPTMY---AAAYGAYPV 409
Query: 168 YGSHQQQVS 176
YG+HQQQVS
Sbjct: 410 YGNHQQQVS 418
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAE 105
++ N TI+VG L + + L F+ GE+AS+K+ K G GFV+F + AE
Sbjct: 80 NADNRTIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAAE 139
Query: 106 EALHKLNGTVI--GKQSFRADY 125
+ L G ++ Q FR ++
Sbjct: 140 KVLQGYAGVLMPNTDQPFRLNW 161
Score = 38.9 bits (89), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQF 98
G + + + +IFVG L +V+D L + F+ +Y + + K+ KG GFV+F
Sbjct: 167 GDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRF 226
Query: 99 ANRENAEEALHKLNGTVIGKQSFR 122
+ +A+ ++NG + R
Sbjct: 227 GDENERSQAMTEMNGVYCSSRPMR 250
>gi|147856810|emb|CAN81343.1| hypothetical protein VITISV_008697 [Vitis vinifera]
Length = 536
Score = 298 bits (762), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 151/192 (78%), Positives = 160/192 (83%), Gaps = 24/192 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSS GGYASNGA QS+GDS NTTIFV
Sbjct: 124 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSHGGYASNGA---SVQSDGDSMNTTIFV 180
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV+DEDLRQPFSQYGEI SVKIPVGKGCGFVQFANR NAE+AL KLNGTVIGKQ+
Sbjct: 181 GGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEDALQKLNGTVIGKQT 240
Query: 121 ------------------FRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAY 162
RAD+GNQWSGAYYGGQVYDGYGYA+PPP+DP+MY AAAY
Sbjct: 241 VRLSWGRNPANKQANSLFMRADFGNQWSGAYYGGQVYDGYGYALPPPHDPTMY---AAAY 297
Query: 163 GAYPVYGSHQQQ 174
GAYPVYG+HQQQ
Sbjct: 298 GAYPVYGNHQQQ 309
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQF 98
G + + + +IFVG L +V+D L + F+ +Y + + K+ KG GFV+F
Sbjct: 55 GDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRF 114
Query: 99 ANRENAEEALHKLNGTVIGKQSFR 122
+ +A+ ++NG + R
Sbjct: 115 GDENERSQAMTEMNGVYCSSRPMR 138
>gi|255538402|ref|XP_002510266.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223550967|gb|EEF52453.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 443
Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 145/190 (76%), Positives = 157/190 (82%), Gaps = 21/190 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSR MRIGAATPRKS+GYQ Q GGY SNGA GQ Q++GDS+NTTIFV
Sbjct: 261 MTEMNGVYCSSRAMRIGAATPRKSTGYQHQ----GGYVSNGASGQAFQADGDSTNTTIFV 316
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNVTDEDL+QPFSQYGEI SVKIPVGKGCGFVQFA+R NAEEAL KLNGTVIGKQ+
Sbjct: 317 GGLDPNVTDEDLKQPFSQYGEIVSVKIPVGKGCGFVQFASRSNAEEALQKLNGTVIGKQT 376
Query: 121 --------------FRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYP 166
R+D+GNQW GAYYGGQ+YDGYGYA+PPP+DPSMY AA YGAYP
Sbjct: 377 VRLSWGRNPANKQQLRSDFGNQWGGAYYGGQIYDGYGYALPPPHDPSMY---AAPYGAYP 433
Query: 167 VYGSHQQQVS 176
VYGSHQQQVS
Sbjct: 434 VYGSHQQQVS 443
Score = 42.4 bits (98), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQF 98
G + ++ + +IFVG L +VTD L + F S+Y + + K+ KG GFV+F
Sbjct: 192 GDKRSDNAPDLSIFVGDLAADVTDSLLHETFVSRYPSVKAAKVVFDANTGRSKGYGFVRF 251
Query: 99 ANRENAEEALHKLNGTVIGKQSFR 122
+ +A+ ++NG ++ R
Sbjct: 252 GDDNERTQAMTEMNGVYCSSRAMR 275
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEAL 108
N T+++G L + + L F+ GEI S+K+ + +G GFV+F AE+ L
Sbjct: 108 NRTVWIGDLHHWMDENYLHTCFASTGEIVSIKVIRNKQTGLSEGYGFVEFYTHATAEKVL 167
Query: 109 HKLNGTVI--GKQSFRADY 125
G ++ +Q FR ++
Sbjct: 168 QNYAGILMPNTEQPFRLNW 186
>gi|224137382|ref|XP_002327112.1| predicted protein [Populus trichocarpa]
gi|222835427|gb|EEE73862.1| predicted protein [Populus trichocarpa]
Length = 429
Score = 287 bits (734), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 154/189 (81%), Positives = 165/189 (87%), Gaps = 17/189 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSRPMRIGAATPRKSSGYQQQ GGY SNGA QG QS+GDS+NTTIFV
Sbjct: 245 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQ----GGYGSNGASAQGFQSDGDSNNTTIFV 300
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNVTDEDL+QPFSQYGEI SVKIPVGKGCGFVQFANR+NAEEAL KLNGTVIGKQ+
Sbjct: 301 GGLDPNVTDEDLKQPFSQYGEIVSVKIPVGKGCGFVQFANRDNAEEALQKLNGTVIGKQT 360
Query: 121 -------------FRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 167
FRAD+G+ W+GAYYGGQVYDGYGYA+PPP+DPSMYAAAAAAYGAYP+
Sbjct: 361 VRLSWGRNPANKQFRADFGSPWNGAYYGGQVYDGYGYALPPPHDPSMYAAAAAAYGAYPI 420
Query: 168 YGSHQQQVS 176
YGSHQQQVS
Sbjct: 421 YGSHQQQVS 429
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQF 98
Q Q EG N TI++G L + + L F GEIAS+K+ K G GFV+F
Sbjct: 82 QKQQREGSGENKTIWIGDLHHWMDENYLHSCFVSTGEIASIKVIRNKQTGLSEGYGFVEF 141
Query: 99 ANRENAEEALHKLNGTVI--GKQSFRADY 125
AE+ L G ++ +Q FR ++
Sbjct: 142 LTHATAEKVLQNYGGILMPNTEQPFRLNW 170
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQF 98
G + ++ + +IFVG L +VTD L++ F S+Y + + K+ KG GFV+F
Sbjct: 176 GDKRSDNAPDLSIFVGDLAADVTDSLLQETFVSKYPSVKAAKVVFDANTGRSKGYGFVRF 235
Query: 99 ANRENAEEALHKLNGTVIGKQSFR 122
+ +A+ ++NG + R
Sbjct: 236 GDDSERTQAMTEMNGVYCSSRPMR 259
>gi|359492062|ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 409
Score = 285 bits (729), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 145/189 (76%), Positives = 154/189 (81%), Gaps = 28/189 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSS QS+GDS NTTIFV
Sbjct: 236 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSH------------VQSDGDSMNTTIFV 283
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV+DEDLRQPFSQYGEI SVKIPVGKGCGFVQFANR NAE+AL KLNGTVIGKQ+
Sbjct: 284 GGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEDALQKLNGTVIGKQT 343
Query: 121 -------------FRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 167
RAD+GNQWSGAYYGGQVYDGYGYA+PPP+DP+MY AAAYGAYPV
Sbjct: 344 VRLSWGRNPANKQMRADFGNQWSGAYYGGQVYDGYGYALPPPHDPTMY---AAAYGAYPV 400
Query: 168 YGSHQQQVS 176
YG+HQQQVS
Sbjct: 401 YGNHQQQVS 409
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAE 105
++ N TI+VG L + + L F+ GE+AS+K+ K G GFV+F + AE
Sbjct: 80 NADNRTIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAAE 139
Query: 106 EALHKLNGTVI--GKQSFRADY 125
+ L G ++ Q FR ++
Sbjct: 140 KVLQGYAGVLMPNTDQPFRLNW 161
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQF 98
G + + + +IFVG L +V+D L + F+ +Y + + K+ KG GFV+F
Sbjct: 167 GDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRF 226
Query: 99 ANRENAEEALHKLNGTVIGKQSFR 122
+ +A+ ++NG + R
Sbjct: 227 GDENERSQAMTEMNGVYCSSRPMR 250
>gi|449446975|ref|XP_004141245.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
gi|449498692|ref|XP_004160607.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
Length = 426
Score = 285 bits (729), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 144/188 (76%), Positives = 157/188 (83%), Gaps = 16/188 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG-YASNGAPGQGPQSEGDSSNTTIF 59
MTEMNG+YCSSRPMRIGAATPRKSSGYQQQ+SSQGG Y++NG QG QSEGDS+NTTIF
Sbjct: 236 MTEMNGIYCSSRPMRIGAATPRKSSGYQQQHSSQGGGYSTNGYFSQGLQSEGDSANTTIF 295
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQ 119
VGGLDPNVTDEDLRQPFSQYGEI SVKIPVGKGCGFVQFANR +AEEAL KLNGTVIGKQ
Sbjct: 296 VGGLDPNVTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVIGKQ 355
Query: 120 SFRA------------DYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 167
+ R D+GNQW+GAYYGG +YDGYGY + P+DPSMY AAYGAY V
Sbjct: 356 TVRLSWGRNPANKQFRDFGNQWNGAYYGGHIYDGYGYGLASPHDPSMY---HAAYGAYTV 412
Query: 168 YGSHQQQV 175
YG+HQQQV
Sbjct: 413 YGNHQQQV 420
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEE 106
S N TI+VG L + + L FS GEI+S+K+ K G GFV+F + AE+
Sbjct: 81 SENKTIWVGDLHHWMDESYLHSCFSSVGEISSMKVIRNKQTGLSEGYGFVEFLSHTTAEK 140
Query: 107 ALHKLNGTVI--GKQSFRADY 125
L +G + +Q+FR ++
Sbjct: 141 VLQNYSGMFMPSTEQTFRLNW 161
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQF 98
G + + + +IFVG L +VTD L + FS ++ + + K+ + KG GFV+F
Sbjct: 167 GDKRSDNDPDLSIFVGDLAADVTDSLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRF 226
Query: 99 ANRENAEEALHKLNGTVIGKQSFR 122
+ +A+ ++NG + R
Sbjct: 227 GDDNERSQAMTEMNGIYCSSRPMR 250
>gi|224067280|ref|XP_002302445.1| predicted protein [Populus trichocarpa]
gi|222844171|gb|EEE81718.1| predicted protein [Populus trichocarpa]
Length = 429
Score = 285 bits (728), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 146/189 (77%), Positives = 156/189 (82%), Gaps = 20/189 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSRPMRIGAATPRKSSGYQQQ GGY SNGA QG QS+GDSSN TIFV
Sbjct: 248 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQ----GGYGSNGASSQGFQSDGDSSNATIFV 303
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNVTDEDL+QPFSQYGEI SVKIPV KGCGFVQFANR NAEEAL KLNGTVIGKQ+
Sbjct: 304 GGLDPNVTDEDLKQPFSQYGEIVSVKIPVSKGCGFVQFANRNNAEEALQKLNGTVIGKQT 363
Query: 121 F-------------RADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 167
RAD+ + W+GAYYGGQVYDGYGYA+PPP+DPS Y AAAYGAYP+
Sbjct: 364 VRLSWGRNPGHKQHRADFSSPWNGAYYGGQVYDGYGYALPPPHDPSTY---AAAYGAYPM 420
Query: 168 YGSHQQQVS 176
YG+HQQQVS
Sbjct: 421 YGNHQQQVS 429
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQF 98
G + ++ + +IFVG L +VTD L++ F S+Y + S K+ KG GFV+F
Sbjct: 179 GDKRSDNTPDLSIFVGDLAADVTDSLLQETFASKYQSVKSAKVVFDANTGRSKGYGFVRF 238
Query: 99 ANRENAEEALHKLNGTVIGKQSFR 122
+ +A+ ++NG + R
Sbjct: 239 GDDTERTQAMTEMNGVYCSSRPMR 262
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRE 102
S GD N TI +G L + + L F+ GEIAS+K+ + +G GFV+F
Sbjct: 91 SSGD--NKTICIGDLHHWMDENYLHTCFASTGEIASIKVIRSKQTGLSEGYGFVEFFTHA 148
Query: 103 NAEEALHKLNGTVI--GKQSFRADY 125
AE+ L G ++ +Q FR ++
Sbjct: 149 TAEKVLQNYGGILMPNTEQPFRLNW 173
>gi|356562301|ref|XP_003549410.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 401
Score = 259 bits (662), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 135/189 (71%), Positives = 148/189 (78%), Gaps = 25/189 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MT+MNGVYCSSRPMRIGAATPRKSSG+QQ G SNG Q SE DS+NTTIFV
Sbjct: 225 MTQMNGVYCSSRPMRIGAATPRKSSGHQQ------GGLSNGTANQ---SEADSTNTTIFV 275
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV+DEDLRQPFSQYGEI SVKIPVGKGCGFVQFANR NAEEAL KLNGT IGKQ+
Sbjct: 276 GGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQT 335
Query: 121 -------------FRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 167
FR D+G+ W+GAYYG +YDGYGYA+PP +DPS+Y AAAYGAYP+
Sbjct: 336 VRLSWGRNPANKQFRMDFGSPWTGAYYGAPMYDGYGYALPPRHDPSIY---AAAYGAYPL 392
Query: 168 YGSHQQQVS 176
YG HQQQVS
Sbjct: 393 YGGHQQQVS 401
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 16/107 (14%)
Query: 27 YQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVK 86
Y QY++Q P Q+ N TI++G L + + L + F+ GEI+S+K
Sbjct: 52 YHHQYAAQ--------PQHQHQNGSGGENKTIWIGDLHHWMDENYLHRCFASTGEISSIK 103
Query: 87 IPVGK------GCGFVQFANRENAEEALHKLNGTVI--GKQSFRADY 125
+ K G GFV+F + AE+ L G ++ +Q FR ++
Sbjct: 104 VIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPNAEQPFRLNW 150
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEA 107
+ +IFVG L +VTD L + F S Y + + K+ KG GFV+F + +A
Sbjct: 165 DLSIFVGDLAADVTDSLLHETFASVYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERTQA 224
Query: 108 LHKLNGTVIGKQSFR 122
+ ++NG + R
Sbjct: 225 MTQMNGVYCSSRPMR 239
>gi|356552180|ref|XP_003544447.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 425
Score = 257 bits (657), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 135/189 (71%), Positives = 147/189 (77%), Gaps = 25/189 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MT+MNGVYCSSRPMRIGAATPRKSSG+QQ G SNG Q SE DS+NTTIFV
Sbjct: 249 MTQMNGVYCSSRPMRIGAATPRKSSGHQQ------GGQSNGTANQ---SEADSTNTTIFV 299
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV+DEDLRQPFSQYGEI SVKIPVGKGCGFVQFANR NAEEAL KLNGT IGKQ+
Sbjct: 300 GGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTSIGKQT 359
Query: 121 -------------FRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 167
FR D+GN W+GAYYG +YDGYGYA+ P +DPS+Y AAAYGAYP+
Sbjct: 360 VRLSWGRNPANKQFRMDFGNPWTGAYYGAPMYDGYGYALTPRHDPSIY---AAAYGAYPL 416
Query: 168 YGSHQQQVS 176
YG HQQQVS
Sbjct: 417 YGGHQQQVS 425
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEAL 108
N TI++G L + + L + F+ GEI+S+K+ K G GFV+F + AE+ L
Sbjct: 96 NKTIWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVL 155
Query: 109 HKLNGTVI--GKQSFRADY 125
G ++ +Q FR ++
Sbjct: 156 QNYAGILMPNTEQPFRLNW 174
Score = 38.9 bits (89), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEA 107
+ +IFVG L +VTD L + F S Y + + K+ KG GFV+F + +A
Sbjct: 189 DLSIFVGDLAADVTDSLLHETFASVYPSVKAAKVVFDANTGRSKGYGFVRFGDDNQRTQA 248
Query: 108 LHKLNGTVIGKQSFR 122
+ ++NG + R
Sbjct: 249 MTQMNGVYCSSRPMR 263
>gi|15594035|emb|CAC69852.1| nucleic acid binding protein [Nicotiana tabacum]
Length = 456
Score = 256 bits (655), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 140/189 (74%), Positives = 151/189 (79%), Gaps = 14/189 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY SNG P QG Q + DS+NTTIFV
Sbjct: 269 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY-SNGGPAQGSQPDADSTNTTIFV 327
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV+DEDLRQPF QYGEI SVKIPV + QFANR +AEEAL KLNGT IGKQ+
Sbjct: 328 GGLDPNVSDEDLRQPFVQYGEIVSVKIPVEERVWVWQFANRNDAEEALQKLNGTFIGKQT 387
Query: 121 FRA-------------DYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 167
R D+GNQW+G YYGG YDGYGYA PP +DP MYAAAAAAYGAYP+
Sbjct: 388 VRLFWGRNPANKQSRGDFGNQWTGPYYGGHFYDGYGYAFPPQHDPGMYAAAAAAYGAYPI 447
Query: 168 YGSHQQQVS 176
YG+HQQQVS
Sbjct: 448 YGTHQQQVS 456
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQF 98
G + + S+ +IFVG L +VTD L + F ++Y + + K+ KG GFV+F
Sbjct: 200 GDKRANNGSDLSIFVGDLAADVTDTLLHETFATKYPSVKAAKVVFDANTGRSKGYGFVRF 259
Query: 99 ANRENAEEALHKLNGTVIGKQSFR 122
+ +A+ ++NG + R
Sbjct: 260 GDDNERSQAMTEMNGVYCSSRPMR 283
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 10/78 (12%)
Query: 57 TIFVGGLDPNVTDED-LRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALH 109
TI+VG L N DED LR F+ E+AS+K+ K G GFV+F AE+ L
Sbjct: 118 TIWVGDL-LNWMDEDYLRNCFASTNEVASIKVIRNKQTGFSEGYGFVEFFTHAAAEKVLQ 176
Query: 110 KLNGTVI--GKQSFRADY 125
+ + Q FR ++
Sbjct: 177 TYSCMTMPNVDQPFRLNW 194
>gi|356510359|ref|XP_003523906.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 409
Score = 250 bits (639), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 139/189 (73%), Positives = 147/189 (77%), Gaps = 24/189 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSRPMRIGAATPRK+SGYQQ G SNG Q SE DS+NTTIFV
Sbjct: 232 MTEMNGVYCSSRPMRIGAATPRKTSGYQQ------GSQSNGTSSQ---SEADSTNTTIFV 282
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQ- 119
GGLDPNVT EDL+QPFSQYGEI SVKIPVGKGCGFVQFANR NAEEAL KLNGT IGKQ
Sbjct: 283 GGLDPNVTAEDLKQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQM 342
Query: 120 ------------SFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 167
FRAD+GN WSGAYYGG VYDGYGYA+PPP DPS+YAAAA AYP+
Sbjct: 343 VRLSWGRSPANKQFRADFGNAWSGAYYGGPVYDGYGYALPPPYDPSIYAAAAYG--AYPI 400
Query: 168 YGSHQQQVS 176
YG +QQQVS
Sbjct: 401 YGGYQQQVS 409
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEE 106
+ N T++VG L + + L + F+ GEI+S+K+ K G GFV+F + A++
Sbjct: 77 AENKTVWVGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHGTADK 136
Query: 107 ALHKLNGTVI--GKQSFRADY 125
L G ++ +Q FR ++
Sbjct: 137 VLQNYAGILMPNTEQPFRLNW 157
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQF 98
G + + + +IFVG L +VTD L + F+ +Y + + K+ KG GFV+F
Sbjct: 163 GDKRSDNVPDLSIFVGDLAADVTDSMLHETFTNRYPSVKAAKVVFDANTGRSKGYGFVRF 222
Query: 99 ANRENAEEALHKLNGTVIGKQSFR 122
+ +A+ ++NG + R
Sbjct: 223 GDDNERSQAMTEMNGVYCSSRPMR 246
>gi|356519168|ref|XP_003528246.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 410
Score = 248 bits (632), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 134/193 (69%), Positives = 144/193 (74%), Gaps = 29/193 (15%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSRPMRIGAATPRK+SGYQQ G SNG Q SE DS+NTTIFV
Sbjct: 230 MTEMNGVYCSSRPMRIGAATPRKTSGYQQ------GSQSNGISSQ---SEADSTNTTIFV 280
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANR----ENAEEALHKLNGTVI 116
GGLD NVT EDL+QPFSQYGEI SVKIPVGKGCGF +R +NAEEAL KLNGT I
Sbjct: 281 GGLDSNVTAEDLKQPFSQYGEIVSVKIPVGKGCGFTICNSRSPGPKNAEEALQKLNGTTI 340
Query: 117 GKQ-------------SFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYG 163
GKQ FRAD+GN WSGAYYGG VYDGYGYA+PP +DPS+Y AAAYG
Sbjct: 341 GKQMVRLSWGRNPANKQFRADFGNAWSGAYYGGPVYDGYGYALPPSHDPSIY---AAAYG 397
Query: 164 AYPVYGSHQQQVS 176
AYP+YG HQQQVS
Sbjct: 398 AYPIYGGHQQQVS 410
Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFV 96
G G + + + +IFVG L +VTD L + FS +Y + + K+ KG GFV
Sbjct: 159 GTGDKRSDNVPDLSIFVGDLAADVTDSMLHETFSNRYPSVKAAKVVFDANTGRSKGYGFV 218
Query: 97 QFANRENAEEALHKLNGTVIGKQSFR 122
+F + + +A+ ++NG + R
Sbjct: 219 RFGDDDERSQAMTEMNGVYCSSRPMR 244
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEE 106
+ N T++VG L + + L + F+ GEI+S+K+ K G GFV+F + AE+
Sbjct: 75 AENKTVWVGDLHHWMDENYLHRCFASNGEISSIKVIRNKQTGLSEGYGFVEFYSHGTAEK 134
Query: 107 ALHKLNGTVI--GKQSFRADY 125
L G ++ +Q FR ++
Sbjct: 135 VLQNYAGILMPNTEQPFRLNW 155
>gi|449470045|ref|XP_004152729.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
gi|449496017|ref|XP_004160013.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
Length = 429
Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 142/190 (74%), Positives = 159/190 (83%), Gaps = 18/190 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+YCSSRPMRIGAATP+KSSGYQQQYSSQG YASNG+ G QS+GD +NTTIF+
Sbjct: 244 MTEMNGIYCSSRPMRIGAATPKKSSGYQQQYSSQG-YASNGSFSHGHQSDGDFTNTTIFI 302
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNVTDEDL+Q FSQ+GEI SVKIPVGKGCGF+QFANR+NAEEAL KLNGTVIGKQ+
Sbjct: 303 GGLDPNVTDEDLKQLFSQHGEIVSVKIPVGKGCGFIQFANRKNAEEALQKLNGTVIGKQT 362
Query: 121 -------------FRADYGNQWSGAYYGGQVYDGYGYAIPPPND-PSMYAAAAAAYGAYP 166
+R DYGN WSGAYYGGQVY GYGYA+P P D P+MY AAAYGAYP
Sbjct: 363 VRLSWGRSPTNKQYRGDYGNHWSGAYYGGQVYGGYGYALPLPYDPPTMY---AAAYGAYP 419
Query: 167 VYGSHQQQVS 176
+YG+HQQQV+
Sbjct: 420 MYGTHQQQVN 429
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 8/82 (9%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEE 106
S N TI+VG L + + L F+ GEI+S+K+ + +G GFV+F + AE+
Sbjct: 89 SENKTIWVGDLQHWMDENYLHSCFASTGEISSLKVIRNKQTGISEGYGFVEFFSHTTAEK 148
Query: 107 ALHKLNGTVI--GKQSFRADYG 126
L + ++ +Q+FR ++
Sbjct: 149 VLQNYSSILMPNTEQAFRLNWA 170
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQF 98
G + + S+ +IFVG L +VTD L + F S+Y + + K+ KG GFV+F
Sbjct: 175 GDKRSENGSDLSIFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRF 234
Query: 99 ANRENAEEALHKLNGTVIGKQSFR 122
+ +A+ ++NG + R
Sbjct: 235 GDDNERSQAMTEMNGIYCSSRPMR 258
>gi|357465449|ref|XP_003603009.1| RNA-binding protein [Medicago truncatula]
gi|355492057|gb|AES73260.1| RNA-binding protein [Medicago truncatula]
Length = 420
Score = 234 bits (598), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 127/190 (66%), Positives = 141/190 (74%), Gaps = 29/190 (15%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ EMNGV+CSSR MRIGAATPRKSSGYQQ G SNG P Q S+ DS+NTTIFV
Sbjct: 246 LNEMNGVFCSSRAMRIGAATPRKSSGYQQ------GGQSNGTPSQ---SDTDSTNTTIFV 296
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDP+ T EDLRQPFSQYGEI SVKIPVGKGCGFVQFANR NAEEAL KLNGT +GKQ+
Sbjct: 297 GGLDPSATAEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTVGKQT 356
Query: 121 -------------FRADYGNQWSG-AYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYP 166
FR+++G+ W+G AYYGG YDGYGYA+P P D SMYAA AYP
Sbjct: 357 VRLSWGRNPANKQFRSEFGSPWNGPAYYGGPAYDGYGYAMPHPYDQSMYAA------AYP 410
Query: 167 VYGSHQQQVS 176
+YG HQQQVS
Sbjct: 411 MYGGHQQQVS 420
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 7/75 (9%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEA 107
+ +IFVG L +VTD L + FS +Y + + K+ KG GFV+F + +A
Sbjct: 186 DLSIFVGDLAADVTDTMLLETFSDKYPSVKAAKVVFDANTGRSKGYGFVRFGDDGERSKA 245
Query: 108 LHKLNGTVIGKQSFR 122
L+++NG ++ R
Sbjct: 246 LNEMNGVFCSSRAMR 260
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEE 106
+ N T++VG L + + L + F+ GEI S+K+ K G GFV+F + AE+
Sbjct: 90 ADNKTLWVGDLHHWMDENYLHRCFASTGEIFSIKVIRNKQTCQTEGYGFVEFTSHGTAEK 149
Query: 107 ALHKLNGTVI--GKQSFRADY 125
L G ++ +Q FR ++
Sbjct: 150 VLQTYAGMLMPNTEQPFRLNW 170
>gi|388494114|gb|AFK35123.1| unknown [Medicago truncatula]
Length = 425
Score = 233 bits (593), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 124/189 (65%), Positives = 138/189 (73%), Gaps = 25/189 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MT+MNGVYCSSRPMRIGAATPRKSSG+Q GG + G QSE DS+NTTIFV
Sbjct: 249 MTQMNGVYCSSRPMRIGAATPRKSSGHQP-----GGQTN----GTSSQSEADSTNTTIFV 299
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLD NVTDEDL+Q FSQYGEIASVKIPVGKGCGFVQFANR NAEEAL KLNGT+IGKQ+
Sbjct: 300 GGLDSNVTDEDLKQTFSQYGEIASVKIPVGKGCGFVQFANRNNAEEALQKLNGTMIGKQT 359
Query: 121 FRADYGNQ------------WSGAYYGGQVYDGYGYAIPPP-NDPSMYAAAAAAYGAYPV 167
R +G W+G Y+ +YDGYGYA+P P +DPSMY AYG YP+
Sbjct: 360 VRLSWGRNPAYKQFRLDVGSWAGPYFPSPIYDGYGYAMPSPHHDPSMY---PLAYGGYPI 416
Query: 168 YGSHQQQVS 176
YG H QQVS
Sbjct: 417 YGGHSQQVS 425
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 8/81 (9%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEAL 108
N T+++G L + + L + F+ GEI SVK+ + +G GF +F + AE+ L
Sbjct: 96 NKTLWIGDLHSWMDESYLHRCFASTGEITSVKVIRNKHSGISEGYGFAEFFSHATAEKVL 155
Query: 109 HKLNGTVI--GKQSFRADYGN 127
G ++ Q+FR ++
Sbjct: 156 QNYAGILMPNADQAFRLNWAT 176
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQF 98
G + + ++ +IFVG L +VTD L + FS Y + + K+ KG GFV+F
Sbjct: 180 GDKGSDNVTDLSIFVGDLAADVTDSVLHETFSSSYPSVKAAKVVYDANTGRSKGYGFVRF 239
Query: 99 ANRENAEEALHKLNGTVIGKQSFR 122
+ +A+ ++NG + R
Sbjct: 240 GDESERSQAMTQMNGVYCSSRPMR 263
>gi|15220241|ref|NP_175181.1| RNA-binding protein 47C' [Arabidopsis thaliana]
gi|75337808|sp|Q9SX80.1|R47CP_ARATH RecName: Full=Polyadenylate-binding protein RBP47C';
Short=Poly(A)-binding protein RBP47C'; AltName:
Full=RNA-binding protein 47C'; Short=AtRBP47C prime;
Short=AtRBP47C'
gi|5668811|gb|AAD46037.1|AC007519_22 Contains 3 PF|00076 RNA recognition motif domains. EST gb|T20424
comes from this gene [Arabidopsis thaliana]
gi|110743035|dbj|BAE99410.1| hypothetical protein [Arabidopsis thaliana]
gi|124301030|gb|ABN04767.1| At1g47500 [Arabidopsis thaliana]
gi|332194057|gb|AEE32178.1| RNA-binding protein 47C' [Arabidopsis thaliana]
Length = 434
Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 124/189 (65%), Positives = 137/189 (72%), Gaps = 25/189 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGV CSSR MRIG ATPRK++GYQQQ GGY +GA +SEGD+ NTTIFV
Sbjct: 258 MTEMNGVKCSSRAMRIGPATPRKTNGYQQQ----GGYMPSGA---FTRSEGDTINTTIFV 310
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLD +VTDEDL+QPFS++GEI SVKIPVGKGCGFVQF NR NAEEAL KLNGTVIGKQ+
Sbjct: 311 GGLDSSVTDEDLKQPFSEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQT 370
Query: 121 FRA-------------DYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 167
R YGNQW YYGGQ Y+GYGY +P P DP MY AA YP+
Sbjct: 371 VRLSWGRNPANKQPRDKYGNQWVDPYYGGQFYNGYGYMVPQP-DPRMYPAAP----YYPM 425
Query: 168 YGSHQQQVS 176
YG HQQQVS
Sbjct: 426 YGGHQQQVS 434
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQFANRE 102
E + + +IFVG L P+V+D L + FS+ Y + + K+ + KG GFV+F +
Sbjct: 193 ENNGPDLSIFVGDLAPDVSDALLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDEN 252
Query: 103 NAEEALHKLNGTVIGKQSFR 122
+A+ ++NG ++ R
Sbjct: 253 ERTKAMTEMNGVKCSSRAMR 272
>gi|15220233|ref|NP_175180.1| RNA-binding protein 47C [Arabidopsis thaliana]
gi|75337807|sp|Q9SX79.1|RB47C_ARATH RecName: Full=Polyadenylate-binding protein RBP47C;
Short=Poly(A)-binding protein RBP47C; AltName:
Full=RNA-binding protein 47C; Short=AtRBP47C
gi|5668812|gb|AAD46038.1|AC007519_23 Contains 3 PF|00076 RNA recognition motif domains. ESTs gb|R30092,
gb|R30093, gb|AA394338, gb|N65719 and gb|AA597577 come
from this gene [Arabidopsis thaliana]
gi|12744993|gb|AAK06876.1|AF344325_1 putative DNA binding protein [Arabidopsis thaliana]
gi|14334552|gb|AAK59684.1| putative DNA binding protein [Arabidopsis thaliana]
gi|17065624|gb|AAL33806.1| putative DNA binding protein [Arabidopsis thaliana]
gi|332194053|gb|AEE32174.1| RNA-binding protein 47C [Arabidopsis thaliana]
Length = 432
Score = 226 bits (576), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 122/189 (64%), Positives = 134/189 (70%), Gaps = 25/189 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGV CSSR MRIG ATPRK++GYQQQ GGY NG + EGD NTTIFV
Sbjct: 256 MTEMNGVKCSSRAMRIGPATPRKTNGYQQQ----GGYMPNGTLTR---PEGDIMNTTIFV 308
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLD +VTDEDL+QPF+++GEI SVKIPVGKGCGFVQF NR NAEEAL KLNGTVIGKQ+
Sbjct: 309 GGLDSSVTDEDLKQPFNEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQT 368
Query: 121 FRA-------------DYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 167
R YGNQW YYGGQ Y+GYGY +P P DP MY AA YP+
Sbjct: 369 VRLSWGRNPANKQPRDKYGNQWVDPYYGGQFYNGYGYMVPQP-DPRMYPAAP----YYPM 423
Query: 168 YGSHQQQVS 176
YG HQQQVS
Sbjct: 424 YGGHQQQVS 432
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQFANRE 102
E + + +IFVG L P+V+D L + FS+ Y + + K+ + KG GFV+F +
Sbjct: 191 ENNGPDLSIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDEN 250
Query: 103 NAEEALHKLNGTVIGKQSFR 122
+A+ ++NG ++ R
Sbjct: 251 ERTKAMTEMNGVKCSSRAMR 270
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS--QYGEIASVKIPVGK------GCGF 95
G Q+ + N TI+VG L + + L F+ EI SVK+ K G GF
Sbjct: 89 GNKHQNAFNGENKTIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGF 148
Query: 96 VQFANRENAEEALHKLNGTVI--GKQSFRADY 125
V+F + + A++ L + NGT + Q FR ++
Sbjct: 149 VEFESHDVADKVLREFNGTTMPNTDQPFRLNW 180
>gi|356521484|ref|XP_003529385.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 431
Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 111/173 (64%), Positives = 131/173 (75%), Gaps = 14/173 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
MTEMNGVYCSSRPMRIG ATP+K+ GYQQQYSSQ GG+A+NGA QG SEGD +N
Sbjct: 254 MTEMNGVYCSSRPMRIGVATPKKTYGYQQQYSSQAVLLAGGHAANGAVAQGSHSEGDLNN 313
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TTIFVGGLD + +DEDLRQPF Q+GE+ SVKIPVGKGCGFVQFA+R+NAEEA+H LNGTV
Sbjct: 314 TTIFVGGLDSDTSDEDLRQPFLQFGEVVSVKIPVGKGCGFVQFADRKNAEEAIHALNGTV 373
Query: 116 IGKQSFRADYG-----NQW----SGAYYGGQVYDGYGYAIPPPNDPSMYAAAA 159
IGKQ+ R +G W +G Y+GGQ Y G+G+A+ D +M A A
Sbjct: 374 IGKQTVRLSWGRSPGNKHWRSDSNGGYFGGQSYGGHGFAVRQNQDIAMQPATA 426
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + + L F+ GE+ S K+ K G GFV+F +R AE+ L
Sbjct: 102 TVWLGDLHHWMDENYLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFVEFYSRATAEKVLQN 161
Query: 111 LNGTVI--GKQSFRADY 125
NGT++ Q+FR ++
Sbjct: 162 YNGTMMPNTDQAFRLNW 178
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFAN 100
+S +S+ +IFVG L +VTD L++ F+ +Y I K+ + KG GFV+F +
Sbjct: 187 RSSDATSDLSIFVGDLAIDVTDAMLQETFAGRYSSIKGAKVVIDSNTGRSKGYGFVRFGD 246
Query: 101 RENAEEALHKLNGTVIGKQSFR 122
A+ ++NG + R
Sbjct: 247 ENERTRAMTEMNGVYCSSRPMR 268
>gi|224105517|ref|XP_002313840.1| predicted protein [Populus trichocarpa]
gi|222850248|gb|EEE87795.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 138/179 (77%), Gaps = 18/179 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
+TEMNG YCSSRPMRIG ATP+K S YQQQYSSQ GG+ASNG QG QS+GDS+N
Sbjct: 231 ITEMNGAYCSSRPMRIGVATPKKPSAYQQQYSSQALVLAGGHASNGTMAQGSQSDGDSNN 290
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TTIFVGG+D +VTDEDLRQPFSQ+GE+ SVK+P GKGC FVQFANR+NAE+AL LNGT
Sbjct: 291 TTIFVGGIDSDVTDEDLRQPFSQFGEVVSVKMPTGKGCAFVQFANRKNAEDALQSLNGTT 350
Query: 116 IGKQS-------------FRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAA 161
IGKQ+ +R D+GNQW GAY+GGQ Y GYGYA+PP DP MY AAAA+
Sbjct: 351 IGKQTVRLSWGRTPANKQWRGDHGNQWHGAYFGGQGYAGYGYAMPPNQDPGMYVAAAAS 409
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Query: 37 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------ 89
+ N A G + S+ +IFVG L +VTD L++ F ++Y + K+
Sbjct: 153 FRLNWASFAGERRADAGSDLSIFVGDLAADVTDAMLQETFATKYASVKGAKVVADSNTGR 212
Query: 90 GKGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
KG GFV+F + A+ ++NG + R
Sbjct: 213 SKGYGFVRFGDENEKTRAITEMNGAYCSSRPMR 245
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T++VG L + + L FS GE++SVKI K G GFV+F + AE+ L
Sbjct: 81 TVWVGDLLHWMDETYLHNCFSHTGEVSSVKIIRNKQTGQLEGYGFVEFYSHAAAEKVLQS 140
Query: 111 LNGTVI--GKQSFRADY 125
+G+++ Q FR ++
Sbjct: 141 YSGSMMPNTDQPFRLNW 157
>gi|224123466|ref|XP_002330321.1| predicted protein [Populus trichocarpa]
gi|222871356|gb|EEF08487.1| predicted protein [Populus trichocarpa]
Length = 397
Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 121/179 (67%), Positives = 138/179 (77%), Gaps = 18/179 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
M EMNG +CSSRPMRIG ATP+K S YQQQYSSQ GG+ASNGA QG QS+GDS+N
Sbjct: 216 MMEMNGAFCSSRPMRIGVATPKKPSAYQQQYSSQALVLAGGHASNGAMAQGSQSDGDSNN 275
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TTIFVGG+D +VTDEDLRQPFSQ+GE+ SVKIPVGKGC FVQFANR+NAE+AL LNGT
Sbjct: 276 TTIFVGGIDSDVTDEDLRQPFSQFGEVVSVKIPVGKGCAFVQFANRKNAEDALQSLNGTT 335
Query: 116 IGKQS-------------FRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAA 161
IGKQ+ +R D+GNQW G Y+GGQ Y GYGYA+PP DP MY AAAA+
Sbjct: 336 IGKQTVRLSWGRTPANKQWRGDHGNQWHGGYFGGQGYAGYGYAMPPNQDPGMYVAAAAS 394
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
TI+VG L + + L FS GE++SVKI K G GFV+F +R AE+ L
Sbjct: 66 TIWVGDLLHWMDEAYLHNCFSHTGEVSSVKIIRNKQTGQLEGYGFVEFYSRAAAEKVLQS 125
Query: 111 LNGTVI--GKQSFRADY 125
+G+++ +Q FR ++
Sbjct: 126 YSGSMMPNTEQPFRLNW 142
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 37 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------ 89
+ N A G + S+ +IFVG L +VTD L++ F+ +Y + K+ +
Sbjct: 138 FRLNWASFAGERRADPGSDLSIFVGDLAADVTDSMLQETFAGKYPSVKGAKVVIDSNTGR 197
Query: 90 GKGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
KG GFV+F + A+ ++NG + R
Sbjct: 198 SKGYGFVRFGDENEKTRAMMEMNGAFCSSRPMR 230
>gi|297741313|emb|CBI32444.3| unnamed protein product [Vitis vinifera]
Length = 342
Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 123/182 (67%), Positives = 137/182 (75%), Gaps = 19/182 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
M EMNG+YCSSRPMRIG ATP+K+SGYQQQYSSQ GG ASNGA QG Q+ GDS+N
Sbjct: 161 MNEMNGIYCSSRPMRIGVATPKKASGYQQQYSSQALVLAGGNASNGAVAQGSQANGDSTN 220
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TTIFVGGLD VTDEDLRQ FSQ+GE+ SVKIPVGKGCGFVQFANR +AE+AL +LNGTV
Sbjct: 221 TTIFVGGLDSEVTDEDLRQSFSQFGEVVSVKIPVGKGCGFVQFANRNSAEDALQRLNGTV 280
Query: 116 IGKQSFRADYG-------------NQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAY 162
IGKQ+ R +G NQW+GAYYGGQ Y G P NDP+MY AAAA Y
Sbjct: 281 IGKQTVRLSWGRNPASKQWRNDSNNQWNGAYYGGQGYGGGYGYAMPQNDPNMY-AAAATY 339
Query: 163 GA 164
GA
Sbjct: 340 GA 341
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 8/77 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T++VG L + D LR F GE++S+KI K G GFV+F +R AE+ LH
Sbjct: 10 TLWVGDLHQWMDDNYLRTCFGHTGEVSSIKIIRNKQTGQSEGYGFVEFFSRATAEKILHS 69
Query: 111 LNGTVI--GKQSFRADY 125
NGT++ +Q FR ++
Sbjct: 70 YNGTLMPNTEQPFRLNW 86
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEE 106
S+ +IFVG L +VTD L++ F ++Y + K+ KG GFV+F +
Sbjct: 100 SDLSIFVGDLASDVTDALLQETFATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSR 159
Query: 107 ALHKLNGTVIGKQSFR 122
A++++NG + R
Sbjct: 160 AMNEMNGIYCSSRPMR 175
>gi|225428741|ref|XP_002285031.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 416
Score = 219 bits (557), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 123/182 (67%), Positives = 137/182 (75%), Gaps = 19/182 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
M EMNG+YCSSRPMRIG ATP+K+SGYQQQYSSQ GG ASNGA QG Q+ GDS+N
Sbjct: 235 MNEMNGIYCSSRPMRIGVATPKKASGYQQQYSSQALVLAGGNASNGAVAQGSQANGDSTN 294
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TTIFVGGLD VTDEDLRQ FSQ+GE+ SVKIPVGKGCGFVQFANR +AE+AL +LNGTV
Sbjct: 295 TTIFVGGLDSEVTDEDLRQSFSQFGEVVSVKIPVGKGCGFVQFANRNSAEDALQRLNGTV 354
Query: 116 IGKQSFRADYG-------------NQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAY 162
IGKQ+ R +G NQW+GAYYGGQ Y G P NDP+MY AAAA Y
Sbjct: 355 IGKQTVRLSWGRNPASKQWRNDSNNQWNGAYYGGQGYGGGYGYAMPQNDPNMY-AAAATY 413
Query: 163 GA 164
GA
Sbjct: 414 GA 415
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 10/79 (12%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEI--ASVKIPVGK------GCGFVQFANRENAEEAL 108
T++VG L + D LR F GE+ +S+KI K G GFV+F +R AE+ L
Sbjct: 82 TLWVGDLHQWMDDNYLRTCFGHTGEVKVSSIKIIRNKQTGQSEGYGFVEFFSRATAEKIL 141
Query: 109 HKLNGTVI--GKQSFRADY 125
H NGT++ +Q FR ++
Sbjct: 142 HSYNGTLMPNTEQPFRLNW 160
Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEE 106
S+ +IFVG L +VTD L++ F ++Y + K+ KG GFV+F +
Sbjct: 174 SDLSIFVGDLASDVTDALLQETFATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSR 233
Query: 107 ALHKLNGTVIGKQSFR 122
A++++NG + R
Sbjct: 234 AMNEMNGIYCSSRPMR 249
>gi|147781769|emb|CAN74486.1| hypothetical protein VITISV_029928 [Vitis vinifera]
Length = 434
Score = 218 bits (556), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 123/182 (67%), Positives = 137/182 (75%), Gaps = 19/182 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
M EMNG+YCSSRPMRIG ATP+K+SGYQQQYSSQ GG ASNGA QG Q+ GDS+N
Sbjct: 253 MNEMNGIYCSSRPMRIGVATPKKASGYQQQYSSQALVLAGGNASNGAVAQGSQANGDSTN 312
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TTIFVGGLD VTDEDLRQ FSQ+GE+ SVKIPVGKGCGFVQFANR +AE+AL +LNGTV
Sbjct: 313 TTIFVGGLDSEVTDEDLRQSFSQFGEVVSVKIPVGKGCGFVQFANRNSAEDALQRLNGTV 372
Query: 116 IGKQSFRADYG-------------NQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAY 162
IGKQ+ R +G NQW+GAYYGGQ Y G P NDP+MY AAAA Y
Sbjct: 373 IGKQTVRLSWGRNPASKQWRNDSNNQWNGAYYGGQGYGGGYGYAMPQNDPNMY-AAAATY 431
Query: 163 GA 164
GA
Sbjct: 432 GA 433
Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEE 106
S+ +IFVG L +VTD L++ F ++Y + K+ KG GFV+F +
Sbjct: 192 SDLSIFVGDLASDVTDALLQETFATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSR 251
Query: 107 ALHKLNGTVIGKQSFR 122
A++++NG + R
Sbjct: 252 AMNEMNGIYCSSRPMR 267
>gi|2708532|gb|AAB92518.1| putative RNA binding protein [Nicotiana tabacum]
Length = 482
Score = 215 bits (547), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 116/194 (59%), Positives = 136/194 (70%), Gaps = 19/194 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
MTEMNGVYCSSR MRIG ATP+K S QQQYSSQ GGYASNGA G QS+GD+SN
Sbjct: 290 MTEMNGVYCSSRAMRIGVATPKKPSA-QQQYSSQAVILSGGYASNGAATHGSQSDGDASN 348
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TTIFVGGLD +VTDE+LRQ F+Q+GE+ SVKIP GKGCGFVQF++R +A+EA+ KL+G +
Sbjct: 349 TTIFVGGLDSDVTDEELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAI 408
Query: 116 IGKQS-------------FRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAY 162
IGKQ+ RAD G+QW+G Y G Q Y GYGY D MYA AA
Sbjct: 409 IGKQAVRLSWGRSPANKQMRADSGSQWNGGYNGRQNYGGYGYGASQNQDSGMYATGAAYG 468
Query: 163 GAYPVYGSHQQQVS 176
+ YG+HQQ VS
Sbjct: 469 ASSNGYGNHQQPVS 482
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC------GFVQFANRENAEEAL 108
N TI++G L + + L FSQ GE+ SVKI K GFV+F AE+ L
Sbjct: 137 NKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVL 196
Query: 109 HKLNGTVI--GKQSFRADY 125
NGT++ +Q FR ++
Sbjct: 197 QSYNGTMMPNAEQPFRLNW 215
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEE 106
S+ +IFVG L +VTD LR F S+Y + K+ V KG GFV+F +
Sbjct: 229 SDFSIFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSR 288
Query: 107 ALHKLNGTVIGKQSFR 122
A+ ++NG ++ R
Sbjct: 289 AMTEMNGVYCSSRAMR 304
>gi|82621116|gb|ABB86246.1| DNA-binding protein-like [Solanum tuberosum]
Length = 423
Score = 214 bits (545), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 113/189 (59%), Positives = 132/189 (69%), Gaps = 15/189 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+YCSSR MRIG ATP+K S QQYSSQGG+ASNGA Q Q++ D SNTT+FV
Sbjct: 237 MTEMNGIYCSSRAMRIGVATPKKPSA-MQQYSSQGGHASNGAATQTSQTDSDLSNTTVFV 295
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLD +VTDE+LRQ FSQ+G + SVKIP GKGCGFVQF+ R AE+A+ KLNGTVIG Q+
Sbjct: 296 GGLDSDVTDEELRQSFSQFGNVVSVKIPAGKGCGFVQFSERSAAEDAIEKLNGTVIGTQT 355
Query: 121 -------------FRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 167
FR D G+QW+G YYG Q Y GYGY D SMY A AA +
Sbjct: 356 VRLSWGRNPANKQFRTDSGSQWNGGYYGRQNYGGYGYGASQSQD-SMYGAGAAHGASSNG 414
Query: 168 YGSHQQQVS 176
YG+H+Q VS
Sbjct: 415 YGNHEQSVS 423
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 57/119 (47%), Gaps = 13/119 (10%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC------GFVQFANRENA 104
G N TI++G L + + L F+Q GE+ SVK+ K GF++F E A
Sbjct: 74 GSEDNRTIWIGDLQQWMDEGYLHTCFAQAGEVISVKVIRNKQTGQSERYGFIEFNTHEAA 133
Query: 105 EEALHKLNGTVI--GKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAA 161
E+ L NGT++ +Q FR + WS A+ G+ G A +D S++ A+
Sbjct: 134 EKVLQSYNGTMMPNAEQPFRLN----WS-AFSTGEKRADVGAAAGSGSDLSIFVGDLAS 187
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANREN 103
G S+ +IFVG L +VTD LR F S+Y + K+ + KG GFV+F +
Sbjct: 173 GSGSDLSIFVGDLASDVTDTMLRDTFSSRYPSVKGAKVVIDSNTGRSKGYGFVRFDDESE 232
Query: 104 AEEALHKLNGTVIGKQSFR 122
A+ ++NG ++ R
Sbjct: 233 RSRAMTEMNGIYCSSRAMR 251
>gi|75334879|sp|Q9LEB3.1|RBP47_NICPL RecName: Full=Polyadenylate-binding protein RBP47;
Short=Poly(A)-binding protein RBP47; AltName:
Full=RNA-binding protein 47; Short=NplRBP47
gi|9663769|emb|CAC01238.1| RNA Binding Protein 47 [Nicotiana plumbaginifolia]
Length = 428
Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 114/194 (58%), Positives = 134/194 (69%), Gaps = 19/194 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
MTEMNGVYCSSR MRIG ATP+K S ++Q YSSQ GGYASNGA G QS+GDSSN
Sbjct: 236 MTEMNGVYCSSRAMRIGVATPKKPSAHEQ-YSSQAVILSGGYASNGAATHGSQSDGDSSN 294
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TTIFVGGLD VTDE+LRQ F+Q+GE+ SVKIP GKGCGFVQF++R +A+EA+ KL+G +
Sbjct: 295 TTIFVGGLDSEVTDEELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAI 354
Query: 116 IGKQS-------------FRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAY 162
IGKQ+ R D G+QW+G Y G Q Y GYGY D MYA AA
Sbjct: 355 IGKQAVRLSWGRSPANKQMRTDSGSQWNGGYNGRQNYGGYGYGASQNQDSGMYATGAAYG 414
Query: 163 GAYPVYGSHQQQVS 176
+ YG+HQQ VS
Sbjct: 415 ASSNRYGNHQQPVS 428
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC------GFVQFANRENAEEAL 108
N TI++G L + + L FSQ GE+ SVKI K GFV+F AE+ L
Sbjct: 83 NKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVL 142
Query: 109 HKLNGTVI--GKQSFRADY 125
NGT++ +Q FR ++
Sbjct: 143 QSYNGTMMPNTEQPFRLNW 161
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEE 106
S+ +IFVG L +VTD LR F S+Y + K+ V KG GFV+F +
Sbjct: 175 SDFSIFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSR 234
Query: 107 ALHKLNGTVIGKQSFR 122
A+ ++NG ++ R
Sbjct: 235 AMTEMNGVYCSSRAMR 250
>gi|255555523|ref|XP_002518798.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223542179|gb|EEF43723.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 438
Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 138/179 (77%), Gaps = 18/179 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
M EMNGVYCSSRPMRIG ATP+KS YQQQYSSQ GG+A NG+ QG QS+GDS+N
Sbjct: 257 MMEMNGVYCSSRPMRIGVATPKKSPAYQQQYSSQALVLAGGHAPNGSMAQGSQSDGDSNN 316
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TTIFVGG+D +++DEDLRQPFSQ+GE+ SVKIP GKGCGFVQFA+R++AE+AL LNGT
Sbjct: 317 TTIFVGGIDSDISDEDLRQPFSQFGEVVSVKIPAGKGCGFVQFADRKSAEDALQSLNGTT 376
Query: 116 IGKQS-------------FRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAA 161
IGKQ+ +R D+ NQW+GAY+GGQ Y GYGYA+ P D +MY AAAA+
Sbjct: 377 IGKQTVRLSWGRSPANKQWRGDHNNQWNGAYFGGQGYGGYGYAMAPNQDQNMYVAAAAS 435
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
TI+VG L + + L FS GE+ SVK+ K G GF++F + AE+ L
Sbjct: 107 TIWVGDLLHWMDETYLHSCFSHTGEVTSVKVIRNKQTGQPEGYGFIEFYSHATAEKVLQN 166
Query: 111 LNGTVI--GKQSFRADY 125
NG+++ Q FR ++
Sbjct: 167 YNGSMMPNADQPFRLNW 183
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Query: 37 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------ 89
+ N A G + S+ +IFVG L +VTD L++ F S+Y + K+
Sbjct: 179 FRLNWASFAGERRTETGSDLSIFVGDLAADVTDAMLQETFSSKYLSVKGAKVVTDLNTGR 238
Query: 90 GKGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
KG GFV+F + A+ ++NG + R
Sbjct: 239 SKGYGFVRFGDENERSRAMMEMNGVYCSSRPMR 271
>gi|1899188|gb|AAC49850.1| DNA binding protein ACBF [Nicotiana tabacum]
Length = 428
Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 120/194 (61%), Positives = 139/194 (71%), Gaps = 19/194 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
MTEMNGVYCSSR MRIG ATP+K S QQQYSSQ GGYASNGA G QS+GD+SN
Sbjct: 236 MTEMNGVYCSSRAMRIGVATPKKPSA-QQQYSSQAVILSGGYASNGAATHGSQSDGDASN 294
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TTIFVGGLD +VTDE+LRQ F+Q+GE+ SVKIP GKGCGFVQF++R +A+EA+ KL+G +
Sbjct: 295 TTIFVGGLDSDVTDEELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAI 354
Query: 116 IGKQS------------FRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYG 163
IGKQ+ RAD G+QW+G Y G Q Y GYGY D MYA AAAYG
Sbjct: 355 IGKQAVRLSWGRTANKQMRADSGSQWNGGYNGRQNYGGYGYGASQNQDSGMYATGAAAYG 414
Query: 164 AYPV-YGSHQQQVS 176
A YG+HQQ VS
Sbjct: 415 ASSNGYGNHQQPVS 428
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC------GFVQFANRENAEEAL 108
N TI++G L + + L FSQ GE+ SVKI K GFV+F AE+ L
Sbjct: 83 NKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVL 142
Query: 109 HKLNGTVI--GKQSFRADY 125
NGT++ +Q FR ++
Sbjct: 143 QSYNGTMMPNAEQPFRLNW 161
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEE 106
S+ +IFVG L +VTD LR F S+Y + K+ V KG GFV+F +
Sbjct: 175 SDFSIFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSR 234
Query: 107 ALHKLNGTVIGKQSFR 122
A+ ++NG ++ R
Sbjct: 235 AMTEMNGVYCSSRAMR 250
>gi|224286528|gb|ACN40970.1| unknown [Picea sitchensis]
Length = 430
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 108/176 (61%), Positives = 125/176 (71%), Gaps = 24/176 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCS+RPMRI AATPRKS+G Q QYS + G + G+ QG S+ D +NTTIFV
Sbjct: 244 MTEMNGVYCSTRPMRISAATPRKSAGVQHQYSGRAG--NGGSHAQGFPSDNDLNNTTIFV 301
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G LDPN TDEDLRQ F QYGE+ SVKIPVGKGCGFVQF NR +AEEAL +L+GTVI +Q+
Sbjct: 302 GRLDPNATDEDLRQVFGQYGELVSVKIPVGKGCGFVQFGNRASAEEALQRLHGTVIRQQT 361
Query: 121 FRADYG--------------------NQWSGAYYGGQVYDGYGYAIPPPNDPSMYA 156
R +G NQW+GAYY GQ Y+ YGYA PPP DP+MYA
Sbjct: 362 VRLSWGRSPANKQQPQPQGQQPQSDPNQWNGAYY-GQGYESYGYA-PPPQDPAMYA 415
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 14/103 (13%)
Query: 47 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFAN 100
PQS + T++VG L + + L FS GE+ S KI K G GF++F
Sbjct: 85 PQSSDEVK--TLWVGDLQFWMDEGYLHTCFSHTGELVSAKIIRNKYTGQSEGYGFMEFIT 142
Query: 101 RENAEEALHKLNGTVI--GKQSFRADYGNQWSGAYYGGQVYDG 141
R AE+ + NGT++ +Q FR + W+ G + DG
Sbjct: 143 RTAAEKIMQTYNGTLMPNTEQVFRMN----WATFSMGERRLDG 181
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALH 109
+IFVG LD +V+D L++ F S+Y + + K+ + KG GFV+F A+
Sbjct: 186 SIFVGDLDSDVSDLVLQETFQSRYSSVKAAKVVMDANTGRSKGYGFVRFGEESERARAMT 245
Query: 110 KLNGTVIGKQSFR 122
++NG + R
Sbjct: 246 EMNGVYCSTRPMR 258
>gi|222641726|gb|EEE69858.1| hypothetical protein OsJ_29658 [Oryza sativa Japonica Group]
Length = 310
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 112/191 (58%), Positives = 132/191 (69%), Gaps = 31/191 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCS+RPMRIG ATPRK+SG ++G G +S+GD +NTT+FV
Sbjct: 136 MTEMNGVYCSTRPMRIGPATPRKTSG------------TSGPTGSAARSDGDLTNTTVFV 183
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV+++DLRQ FSQYGEI+SVKIPVGK CGFVQF R+NAE+AL LNG+ IGKQ+
Sbjct: 184 GGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQCGFVQFVQRKNAEDALQGLNGSTIGKQT 243
Query: 121 -------------FRADYGNQW-SGAYYGGQ-VYDGYGYAIPPPNDPSMYAAAAAAYGAY 165
R+D G+QW +G YY Y GYGY P P DP MY AAAYGAY
Sbjct: 244 VRLSWGRNPANKQLRSDNGSQWNNGMYYAASPFYSGYGYPAPFPADPGMY---AAAYGAY 300
Query: 166 PVYGSHQQQVS 176
P YG +QQQVS
Sbjct: 301 PFYG-NQQQVS 310
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +V D L + FS+ Y + K+ + KG GFV+F +
Sbjct: 74 ASDHSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDANTGRSKGYGFVRFGDDNEKT 133
Query: 106 EALHKLNGTVIGKQSFR 122
A+ ++NG + R
Sbjct: 134 HAMTEMNGVYCSTRPMR 150
>gi|224284226|gb|ACN39849.1| unknown [Picea sitchensis]
Length = 429
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 108/176 (61%), Positives = 125/176 (71%), Gaps = 25/176 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCS+RPMRI AATPRKS+G Q QYS +G + G+ QG S+ D +NTTIFV
Sbjct: 244 MTEMNGVYCSTRPMRISAATPRKSAGVQHQYSGRG---NGGSHAQGFPSDNDLNNTTIFV 300
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G LDPN TDEDLRQ F QYGE+ SVKIPVGKGCGFVQF NR +AEEAL +L+GTVI +Q+
Sbjct: 301 GRLDPNATDEDLRQVFGQYGELVSVKIPVGKGCGFVQFGNRASAEEALQRLHGTVIRQQT 360
Query: 121 FRADYG--------------------NQWSGAYYGGQVYDGYGYAIPPPNDPSMYA 156
R +G NQW+GAYY GQ Y+ YGYA PPP DP+MYA
Sbjct: 361 VRLSWGRSPANKQQPQPQGQQPQSDPNQWNGAYY-GQGYESYGYA-PPPQDPAMYA 414
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 14/103 (13%)
Query: 47 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFAN 100
PQS + T++VG L + + L FS GE+ S KI K G GF++F
Sbjct: 85 PQSSDEVK--TLWVGDLQFWMDEGYLHTCFSHTGELVSAKIIRNKYTGQSEGYGFMEFIT 142
Query: 101 RENAEEALHKLNGTVI--GKQSFRADYGNQWSGAYYGGQVYDG 141
R AE+ + NGT++ +Q FR + W+ G + DG
Sbjct: 143 RTAAEKIMQTYNGTLMPNTEQVFRMN----WATFSMGERRLDG 181
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALH 109
+IFVG LD +V+D L++ F S+Y + + K+ + KG GFV+F A+
Sbjct: 186 SIFVGDLDSDVSDLVLQETFQSRYSSVKAAKVVMDANTGRSKGYGFVRFGEESERARAMT 245
Query: 110 KLNGTVIGKQSFR 122
++NG + R
Sbjct: 246 EMNGVYCSTRPMR 258
>gi|50725189|dbj|BAD33940.1| putative nucleic acid binding protein [Oryza sativa Japonica Group]
gi|51535291|dbj|BAD38554.1| putative nucleic acid binding protein [Oryza sativa Japonica Group]
Length = 316
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 112/191 (58%), Positives = 132/191 (69%), Gaps = 31/191 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCS+RPMRIG ATPRK+SG ++G G +S+GD +NTT+FV
Sbjct: 142 MTEMNGVYCSTRPMRIGPATPRKTSG------------TSGPTGSAARSDGDLTNTTVFV 189
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV+++DLRQ FSQYGEI+SVKIPVGK CGFVQF R+NAE+AL LNG+ IGKQ+
Sbjct: 190 GGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQCGFVQFVQRKNAEDALQGLNGSTIGKQT 249
Query: 121 -------------FRADYGNQW-SGAYYGGQ-VYDGYGYAIPPPNDPSMYAAAAAAYGAY 165
R+D G+QW +G YY Y GYGY P P DP MY AAAYGAY
Sbjct: 250 VRLSWGRNPANKQLRSDNGSQWNNGMYYAASPFYSGYGYPAPFPADPGMY---AAAYGAY 306
Query: 166 PVYGSHQQQVS 176
P YG +QQQVS
Sbjct: 307 PFYG-NQQQVS 316
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +V D L + FS+ Y + K+ + KG GFV+F +
Sbjct: 80 ASDHSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDANTGRSKGYGFVRFGDDNEKT 139
Query: 106 EALHKLNGTVIGKQSFR 122
A+ ++NG + R
Sbjct: 140 HAMTEMNGVYCSTRPMR 156
>gi|215765810|dbj|BAG87507.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 345
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 112/191 (58%), Positives = 132/191 (69%), Gaps = 31/191 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCS+RPMRIG ATPRK+SG ++G G +S+GD +NTT+FV
Sbjct: 171 MTEMNGVYCSTRPMRIGPATPRKTSG------------TSGPTGSAARSDGDLTNTTVFV 218
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV+++DLRQ FSQYGEI+SVKIPVGK CGFVQF R+NAE+AL LNG+ IGKQ+
Sbjct: 219 GGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQCGFVQFVQRKNAEDALQGLNGSTIGKQT 278
Query: 121 -------------FRADYGNQW-SGAYYGGQ-VYDGYGYAIPPPNDPSMYAAAAAAYGAY 165
R+D G+QW +G YY Y GYGY P P DP MY AAAYGAY
Sbjct: 279 VRLSWGRNPANKQLRSDNGSQWNNGMYYAASPFYSGYGYPAPFPADPGMY---AAAYGAY 335
Query: 166 PVYGSHQQQVS 176
P YG +QQQVS
Sbjct: 336 PFYG-NQQQVS 345
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +V D L + FS+ Y + K+ + KG GFV+F +
Sbjct: 109 ASDHSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDANTGRSKGYGFVRFGDDNEKT 168
Query: 106 EALHKLNGTVIGKQSFR 122
A+ ++NG + R
Sbjct: 169 HAMTEMNGVYCSTRPMR 185
Score = 36.6 bits (83), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEAL 108
N TI+VG L + + L F GE+ ++K+ K G GFV+F + AE+ L
Sbjct: 18 NKTIWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVL 77
Query: 109 HKLNGTVI--GKQSFRADY 125
G ++ Q FR ++
Sbjct: 78 EGFAGHIMPNTDQPFRINW 96
>gi|115479619|ref|NP_001063403.1| Os09g0462700 [Oryza sativa Japonica Group]
gi|113631636|dbj|BAF25317.1| Os09g0462700, partial [Oryza sativa Japonica Group]
Length = 441
Score = 202 bits (513), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 112/191 (58%), Positives = 132/191 (69%), Gaps = 31/191 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCS+RPMRIG ATPRK+SG ++G G +S+GD +NTT+FV
Sbjct: 267 MTEMNGVYCSTRPMRIGPATPRKTSG------------TSGPTGSAARSDGDLTNTTVFV 314
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV+++DLRQ FSQYGEI+SVKIPVGK CGFVQF R+NAE+AL LNG+ IGKQ+
Sbjct: 315 GGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQCGFVQFVQRKNAEDALQGLNGSTIGKQT 374
Query: 121 -------------FRADYGNQW-SGAYYGGQ-VYDGYGYAIPPPNDPSMYAAAAAAYGAY 165
R+D G+QW +G YY Y GYGY P P DP MY AAAYGAY
Sbjct: 375 VRLSWGRNPANKQLRSDNGSQWNNGMYYAASPFYSGYGYPAPFPADPGMY---AAAYGAY 431
Query: 166 PVYGSHQQQVS 176
P YG +QQQVS
Sbjct: 432 PFYG-NQQQVS 441
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +V D L + FS+ Y + K+ + KG GFV+F +
Sbjct: 205 ASDHSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDANTGRSKGYGFVRFGDDNEKT 264
Query: 106 EALHKLNGTVIGKQSFR 122
A+ ++NG + R
Sbjct: 265 HAMTEMNGVYCSTRPMR 281
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Query: 47 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFAN 100
P+ G N TI+VG L + + L F GE+ ++K+ K G GFV+F +
Sbjct: 106 PRGGGQEENKTIWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYS 165
Query: 101 RENAEEALHKLNGTVI--GKQSFRADY 125
AE+ L G ++ Q FR ++
Sbjct: 166 HAAAEKVLEGFAGHIMPNTDQPFRINW 192
>gi|218202287|gb|EEC84714.1| hypothetical protein OsI_31675 [Oryza sativa Indica Group]
Length = 377
Score = 202 bits (513), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 111/191 (58%), Positives = 132/191 (69%), Gaps = 31/191 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCS+RPMRIG ATPRK+SG ++G G +S+GD +NTT+FV
Sbjct: 203 MTEMNGVYCSTRPMRIGPATPRKTSG------------TSGPTGSAARSDGDLTNTTVFV 250
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV+++DLRQ FSQYGEI+SVKIPVGK CGFVQF R+NAE+AL LNG+ IGKQ+
Sbjct: 251 GGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQCGFVQFVQRKNAEDALQGLNGSTIGKQT 310
Query: 121 -------------FRADYGNQW-SGAYYGGQ-VYDGYGYAIPPPNDPSMYAAAAAAYGAY 165
R+D G+QW +G +Y Y GYGY P P DP MY AAAYGAY
Sbjct: 311 VRLSWGRNPANKQLRSDNGSQWNNGMFYAASPFYSGYGYPAPFPADPGMY---AAAYGAY 367
Query: 166 PVYGSHQQQVS 176
P YG +QQQVS
Sbjct: 368 PFYG-NQQQVS 377
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQ 97
G + +S+ +IFVG L +V D L + FS+ Y + K+ + KG GFV+
Sbjct: 133 MGDRRSDIASDHSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDANTGRSKGYGFVR 192
Query: 98 FANRENAEEALHKLNGTVIGKQSFR 122
F + A+ ++NG + R
Sbjct: 193 FGDDNEKTHAMTEMNGVYCSTRPMR 217
>gi|350536139|ref|NP_001234487.1| DNA-binding protein [Solanum lycopersicum]
gi|40804404|gb|AAR91698.1| DNA-binding protein [Solanum lycopersicum]
Length = 428
Score = 201 bits (512), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 109/193 (56%), Positives = 128/193 (66%), Gaps = 18/193 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ----GGYASNGAPGQGPQSEGDSSNT 56
MTEMNG+YCSSR MRIG ATP+K S QQ + GG+ASNGA Q Q++ D SNT
Sbjct: 237 MTEMNGIYCSSRAMRIGVATPKKPSPMQQYFPQAVILAGGHASNGAATQTSQTDSDLSNT 296
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
T+FVGGLD VTDE+LRQ FSQ+G + SVKIP GKGCGFVQF+ R AE+A+ KLNGTVI
Sbjct: 297 TVFVGGLDSEVTDEELRQSFSQFGNVVSVKIPAGKGCGFVQFSERSAAEDAIEKLNGTVI 356
Query: 117 GKQS-------------FRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYG 163
G Q+ FR D G+QW+G YYG Q Y GYGY D SMY A AA
Sbjct: 357 GAQTVRLSWGRNPANKQFRTDSGSQWNGGYYGRQNYGGYGYGASQSQD-SMYGAGAAHGA 415
Query: 164 AYPVYGSHQQQVS 176
+ YG+H+Q VS
Sbjct: 416 SSNGYGNHEQSVS 428
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC------GFVQFANRENAEEAL 108
N TI++G L + + L F+Q GE+ SVK+ K GF++F E AE+ L
Sbjct: 78 NRTIWIGDLQQWMDEGYLHTCFAQAGEVISVKVIRNKQTGQSERYGFIEFNTHEAAEKVL 137
Query: 109 HKLNGTVI--GKQSFRADY 125
NGT++ +Q FR ++
Sbjct: 138 QSYNGTMMPNAEQPFRLNW 156
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANREN 103
G S+ +IFVG L +VTD LR F S+Y + K+ + KG GFV+F +
Sbjct: 173 GSGSDLSIFVGDLASDVTDTMLRDTFSSRYPSVKGAKVVIDSNTGRSKGYGFVRFDDESE 232
Query: 104 AEEALHKLNGTVIGKQSFR 122
A+ ++NG ++ R
Sbjct: 233 RSRAMTEMNGIYCSSRAMR 251
>gi|356500047|ref|XP_003518846.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 431
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 94/131 (71%), Positives = 110/131 (83%), Gaps = 5/131 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
MTEMNGVYCSSRPMRIG ATP+K+ G+QQQYSSQ GG+++NGA QG SEGD +N
Sbjct: 253 MTEMNGVYCSSRPMRIGVATPKKTYGFQQQYSSQAVVLAGGHSANGAVAQGSHSEGDINN 312
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TTIFVGGLD + +DEDLRQPF Q+GE+ SVKIPVGKGCGFVQFA+R+NAEEA+ LNGTV
Sbjct: 313 TTIFVGGLDSDTSDEDLRQPFLQFGEVVSVKIPVGKGCGFVQFADRKNAEEAIQGLNGTV 372
Query: 116 IGKQSFRADYG 126
IGKQ+ R +G
Sbjct: 373 IGKQTVRLSWG 383
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + + L F+ GE+ S K+ K G GFV+F +R AE+ L
Sbjct: 101 TVWLGDLHHWMDENYLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFVEFYSRGTAEKVLQN 160
Query: 111 LNGTVI--GKQSFRADY 125
NGT++ Q+FR ++
Sbjct: 161 YNGTMMPNTDQAFRLNW 177
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFAN 100
+S +S+ +IFVG L +VTD L+ F+ +Y I K+ + KG GFV+F +
Sbjct: 186 RSSDATSDLSIFVGDLAIDVTDAMLQDTFAGRYSSIKGAKVVIDSNTGRSKGYGFVRFGD 245
Query: 101 RENAEEALHKLNGTVIGKQSFR 122
A+ ++NG + R
Sbjct: 246 ENERTRAMTEMNGVYCSSRPMR 267
>gi|388505308|gb|AFK40720.1| unknown [Medicago truncatula]
Length = 454
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 93/132 (70%), Positives = 108/132 (81%), Gaps = 6/132 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ------GGYASNGAPGQGPQSEGDSS 54
MTEMNGVYCSSRPMR+G ATP+K+ G QQYSSQ GG SNGA QG QSEGDS+
Sbjct: 273 MTEMNGVYCSSRPMRVGVATPKKTYGNPQQYSSQAVVLAGGGGHSNGAMAQGSQSEGDSN 332
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
NTTIFVGGLD +++DEDLRQPF Q+G++ SVKIPVGKGCGFVQ A+R+NAEEA+ LNGT
Sbjct: 333 NTTIFVGGLDSDISDEDLRQPFLQFGDVISVKIPVGKGCGFVQLADRKNAEEAIQGLNGT 392
Query: 115 VIGKQSFRADYG 126
VIGKQ+ R +G
Sbjct: 393 VIGKQTVRLSWG 404
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
TI++G L + + L F+ GE+AS K+ K G GFV+F R AE+ L
Sbjct: 117 TIWLGDLHHWMDETFLHNCFAHTGEVASAKVIRNKQTGQSEGYGFVEFYTRAMAEKVLQN 176
Query: 111 LNGTVI--GKQSFRADY 125
NGT++ Q+FR ++
Sbjct: 177 FNGTMMPNTDQAFRLNW 193
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 11/114 (9%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P ++ +++ +++ G G+ SE +S+ ++FVG L +VTD L++ F
Sbjct: 179 GTMMPNTDQAFRLNWAT---FSAAGGGGERRSSEA-TSDLSVFVGDLAIDVTDAMLQETF 234
Query: 77 -SQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSFRA 123
S++ I K+ + KG GFV+F + A+ ++NG + R
Sbjct: 235 ASKFSSIKGAKVVIDSNTGRSKGYGFVRFGDESERTRAMTEMNGVYCSSRPMRV 288
>gi|357475467|ref|XP_003608019.1| RNA Binding Protein [Medicago truncatula]
gi|355509074|gb|AES90216.1| RNA Binding Protein [Medicago truncatula]
Length = 454
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 93/132 (70%), Positives = 108/132 (81%), Gaps = 6/132 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ------GGYASNGAPGQGPQSEGDSS 54
MTEMNGVYCSSRPMR+G ATP+K+ G QQYSSQ GG SNGA QG QSEGDS+
Sbjct: 273 MTEMNGVYCSSRPMRVGVATPKKTYGNPQQYSSQAVVLAGGGGHSNGAMAQGSQSEGDSN 332
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
NTTIFVGGLD +++DEDLRQPF Q+G++ SVKIPVGKGCGFVQ A+R+NAEEA+ LNGT
Sbjct: 333 NTTIFVGGLDSDISDEDLRQPFLQFGDVISVKIPVGKGCGFVQLADRKNAEEAIQGLNGT 392
Query: 115 VIGKQSFRADYG 126
VIGKQ+ R +G
Sbjct: 393 VIGKQTVRLSWG 404
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
TI++G L + + L F+ GE+AS K+ K G GFV+F R AE+ L
Sbjct: 117 TIWLGDLHHWMDETFLHNCFAHTGEVASAKVIRNKQTGQSEGYGFVEFYTRAMAEKVLQN 176
Query: 111 LNGTVI--GKQSFRADY 125
NGT++ Q+FR ++
Sbjct: 177 FNGTMMPNTDQAFRLNW 193
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 11/114 (9%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P ++ +++ +++ G G+ SE +S+ ++FVG L +VTD L++ F
Sbjct: 179 GTMMPNTDQAFRLNWAT---FSAAGGGGERRSSEA-TSDLSVFVGDLAIDVTDAMLQETF 234
Query: 77 -SQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSFRA 123
S++ I K+ + KG GFV+F + A+ ++NG + R
Sbjct: 235 ASKFSSIKGAKVVIDSNTGRSKGYGFVRFGDESERTRAMTEMNGVYCSSRPMRV 288
>gi|116788528|gb|ABK24911.1| unknown [Picea sitchensis]
Length = 397
Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 106/180 (58%), Positives = 120/180 (66%), Gaps = 27/180 (15%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNG----APGQGPQSEGDSSNT 56
MTEMNGVYC SRPMRI ATP+KS G QQ YS +G Y + GQG QS+ D +NT
Sbjct: 204 MTEMNGVYCCSRPMRINEATPKKSLGLQQSYSMKGNYYTQAYGGAVAGQGFQSDNDPNNT 263
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
TIFVGGLDPN TDEDLRQ F +GEI VKIPVGKGCGFVQF NR +AEEAL KL+GT+I
Sbjct: 264 TIFVGGLDPNATDEDLRQVFGPFGEIVYVKIPVGKGCGFVQFTNRSSAEEALQKLHGTII 323
Query: 117 GKQSFRADYG-------------------NQWS--GAYYG-GQVYDGYGYAIPPPNDPSM 154
G+QS R +G NQW+ GAYY GQ Y+ YGYA PP DP+M
Sbjct: 324 GQQSIRLSWGRSPANKQTASWGVQPQPDPNQWNGGGAYYSYGQGYEAYGYA-PPAQDPTM 382
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFANRENAEEALH 109
+IFVG L P V D L++ F S+Y + S K+ + KG GFV+F + A+
Sbjct: 146 SIFVGDLGPEVIDILLQETFQSRYSSVKSAKVVIDANTGRTKGYGFVRFGDENEKNRAMT 205
Query: 110 KLNGTVIGKQSFRAD 124
++NG + R +
Sbjct: 206 EMNGVYCCSRPMRIN 220
Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIA-SVKIPVGK------GCGF 95
P G GD T ++VG L + + L+ FS GE+ SVKI K G GF
Sbjct: 39 PFHGELQSGDEIKT-LWVGDLQYWMDENYLQTCFSSNGEVVVSVKIIRNKQTGQPEGYGF 97
Query: 96 VQFANRENAEEALHKLNGT 114
V+ +R +AE L L+GT
Sbjct: 98 VELDSRASAERILQTLHGT 116
>gi|297846966|ref|XP_002891364.1| ATRBP47C [Arabidopsis lyrata subsp. lyrata]
gi|297337206|gb|EFH67623.1| ATRBP47C [Arabidopsis lyrata subsp. lyrata]
Length = 443
Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 121/189 (64%), Positives = 134/189 (70%), Gaps = 22/189 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGV CSSR MRIG ATPRK++GYQQQ GGY NGA + EGD+ NTTIFV
Sbjct: 264 MTEMNGVKCSSRAMRIGPATPRKTTGYQQQ----GGYMPNGALTR---PEGDTLNTTIFV 316
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLD +VTD+DLRQPFS++GEI SVKIPVGKGCGFVQF NR +AEEAL KLNGTVIGKQ+
Sbjct: 317 GGLDSSVTDDDLRQPFSEFGEIVSVKIPVGKGCGFVQFVNRPSAEEALEKLNGTVIGKQT 376
Query: 121 FRA-------------DYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 167
R YGNQW YYGGQ Y+GYGY +P P DP MY A G +
Sbjct: 377 VRLSWGRNQANKQPRDKYGNQWVAPYYGGQYYNGYGYMVPQP-DPRMYPATPYGGGYR-M 434
Query: 168 YGSHQQQVS 176
YG HQQQVS
Sbjct: 435 YGGHQQQVS 443
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQFANRE 102
E + + +IFVG L P+V+D L + FS+ Y + + K+ + KG GFV+F +
Sbjct: 199 ENNGPDLSIFVGDLAPDVSDTLLHETFSEKYPSVKAAKVVIDANTGRSKGYGFVRFGDEN 258
Query: 103 NAEEALHKLNGTVIGKQSFR 122
+A+ ++NG ++ R
Sbjct: 259 ERTKAMTEMNGVKCSSRAMR 278
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 27 YQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASV 85
Y Q S + S G Q+ + N TI+VG L + + L F S GEI V
Sbjct: 79 YHQYPSHHLHHQSRGNNNNKHQNASNGENKTIWVGDLHHWMDETYLNSSFASADGEIQIV 138
Query: 86 KIPV--------GKGCGFVQFANRENAEEALHKLNGTVI--GKQSFRADYG 126
+ V +G GFV+F + + A++ L + NGT + +Q FR ++
Sbjct: 139 SVKVIRNKHNGLSEGYGFVEFDSHDVADKVLQEFNGTTMPDTEQPFRLNWA 189
>gi|357158812|ref|XP_003578248.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 431
Score = 191 bits (485), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 112/191 (58%), Positives = 129/191 (67%), Gaps = 30/191 (15%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCS+RPMRIG ATPRKSSG S +S+GD +NTT+FV
Sbjct: 256 MTEMNGVYCSTRPMRIGPATPRKSSGNSGSTGSSA------------RSDGDLTNTTVFV 303
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV+++DLRQ FSQYGEI+SVKIPVGK CGFVQF R+NAE+AL LNG+ IGKQ+
Sbjct: 304 GGLDPNVSEDDLRQSFSQYGEISSVKIPVGKQCGFVQFLQRKNAEDALQGLNGSTIGKQT 363
Query: 121 -------------FRADYGNQW-SGAYYGGQ-VYDGYGYAIPPPNDPSMYAAAAAAYGAY 165
R+D GNQW +G YY Y+GYGY P DP MY AAAYGAY
Sbjct: 364 VRLSWGRNPANKQLRSDNGNQWNNGMYYAASPFYNGYGYPAAPFPDPGMY--TAAAYGAY 421
Query: 166 PVYGSHQQQVS 176
P YG +QQQVS
Sbjct: 422 PFYG-NQQQVS 431
Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +V D L + FS +Y + K+ + KG GFV+F +
Sbjct: 194 ASDHSIFVGDLASDVNDATLLEIFSSRYSSVKGAKVVIDANTGRSKGYGFVRFGDDSEKT 253
Query: 106 EALHKLNGTVIGKQSFR 122
A+ ++NG + R
Sbjct: 254 HAMTEMNGVYCSTRPMR 270
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENA 104
G N TI+VG L + + L F GE+ ++K+ K G GFV+F + A
Sbjct: 99 GQEENKTIWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAA 158
Query: 105 EEALHKLNGTVI--GKQSFRADYGN 127
E+ L G ++ Q FR ++ +
Sbjct: 159 EKVLDGFAGHIMPNTDQPFRINWAS 183
>gi|326495566|dbj|BAJ85879.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 479
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 111/191 (58%), Positives = 130/191 (68%), Gaps = 31/191 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCS+RPMRIG ATPRKSSG S +S+GD +NTT+FV
Sbjct: 305 MTEMNGVYCSTRPMRIGPATPRKSSGTSGSTGSSA------------RSDGDLTNTTVFV 352
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV+++DL+Q FSQYGEI+SVKIPVGK CGFVQF R+NAE+AL LNG+ IGKQ+
Sbjct: 353 GGLDPNVSEDDLKQTFSQYGEISSVKIPVGKQCGFVQFLQRKNAEDALQGLNGSTIGKQT 412
Query: 121 -------------FRADYGNQW-SGAYYG-GQVYDGYGYAIPPPNDPSMYAAAAAAYGAY 165
R+D GNQW +G YY Y+GYGY P DP MY AAAYGAY
Sbjct: 413 VRLSWGRNPANKQLRSDNGNQWNNGMYYAPSPFYNGYGYPAAPFPDPGMY---AAAYGAY 469
Query: 166 PVYGSHQQQVS 176
P+YG +QQQVS
Sbjct: 470 PLYG-NQQQVS 479
Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +V D L + FS +Y + K+ + KG GFV+F +
Sbjct: 243 ASDHSIFVGDLASDVNDTALLETFSSRYSSVKGAKVVIDANTGRSKGYGFVRFGDDSEKT 302
Query: 106 EALHKLNGTVIGKQSFR 122
A+ ++NG + R
Sbjct: 303 NAMTEMNGVYCSTRPMR 319
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENA 104
G N TI+VG L + + L F GE+ ++K+ K G GFV+F + A
Sbjct: 148 GQEENKTIWVGDLHYWMDENYLHTCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAA 207
Query: 105 EEALHKLNGTVI--GKQSFRADYGN 127
E+ L G ++ Q FR ++ +
Sbjct: 208 EKVLDGFAGHIMPNTDQPFRINWAS 232
>gi|165935740|gb|ABY75165.1| RNA binding protein [Arachis diogoi]
Length = 142
Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 104/143 (72%), Positives = 113/143 (79%), Gaps = 17/143 (11%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
QSE DS+NTTIFVGGLDPNVTDEDLRQ FSQYGEI SVK+PVGKGCGFVQFA R NAEEA
Sbjct: 3 QSEADSTNTTIFVGGLDPNVTDEDLRQQFSQYGEIVSVKVPVGKGCGFVQFAIRNNAEEA 62
Query: 108 LHKLNGTVIGKQS-------------FRADY-GNQWSGAYYGGQVYDGYGYAIPPPNDPS 153
L KLNGTVIGKQ+ FR D+ GN WSG YYG VYDGYGYA+PPP+DPS
Sbjct: 63 LQKLNGTVIGKQTVRLSWGRNPANKQFRMDFGGNHWSGTYYGAPVYDGYGYALPPPHDPS 122
Query: 154 MYAAAAAAYGAYPVYGSHQQQVS 176
+YAAA A AYP+YG HQQQV+
Sbjct: 123 IYAAAYA---AYPIYGGHQQQVN 142
>gi|449523756|ref|XP_004168889.1| PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis
sativus]
Length = 437
Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 99/180 (55%), Positives = 125/180 (69%), Gaps = 19/180 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG----QGPQSEGDSSNT 56
MTEMNG+YCSSRPMRIG ATP+K+SGYQQ Y+SQ + G P QG QS+ +S+NT
Sbjct: 252 MTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQGSQSDSESNNT 311
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
TIFVGGLD +V+DEDL+Q FS++G++ SVKIP+GKGCGFVQFANR+NAE+A+ LNGTVI
Sbjct: 312 TIFVGGLDSDVSDEDLKQAFSKFGDVVSVKIPIGKGCGFVQFANRKNAEDAIQGLNGTVI 371
Query: 117 GKQSFRADYG-------------NQWS--GAYYGGQVYDGYGYAIPPPNDPSMYAAAAAA 161
GKQ+ R +G NQW+ G Y++P DP+M+ AAAA
Sbjct: 372 GKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYSVPQHQDPNMHPTAAAA 431
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 47 PQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFA 99
P+ +G + T+++G L P + + L F+ GE++SVK+ K G GFV+F
Sbjct: 90 PRRQGSTDEVKTLWIGDLQPWMDETYLNNCFAHTGEVSSVKVICNKQTGQSEGYGFVEFF 149
Query: 100 NRENAEEALHKLNGTVI 116
+ AE+ L NGT++
Sbjct: 150 SHTTAEKVLQNYNGTIM 166
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEE 106
S+ +IFVG L +VTD L++ F S+Y + K+ + KG GFV+F +
Sbjct: 191 SDLSIFVGDLAADVTDAILQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTR 250
Query: 107 ALHKLNGTVIGKQSFR 122
A+ ++NG + R
Sbjct: 251 AMTEMNGIYCSSRPMR 266
>gi|449455232|ref|XP_004145357.1| PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis
sativus]
Length = 436
Score = 188 bits (478), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 99/180 (55%), Positives = 125/180 (69%), Gaps = 19/180 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG----QGPQSEGDSSNT 56
MTEMNG+YCSSRPMRIG ATP+K+SGYQQ Y+SQ + G P QG QS+ +S+NT
Sbjct: 251 MTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQGSQSDSESNNT 310
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
TIFVGGLD +V+DEDL+Q FS++G++ SVKIP+GKGCGFVQFANR+NAE+A+ LNGTVI
Sbjct: 311 TIFVGGLDSDVSDEDLKQAFSKFGDVVSVKIPIGKGCGFVQFANRKNAEDAIQGLNGTVI 370
Query: 117 GKQSFRADYG-------------NQWS--GAYYGGQVYDGYGYAIPPPNDPSMYAAAAAA 161
GKQ+ R +G NQW+ G Y++P DP+M+ AAAA
Sbjct: 371 GKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYSVPQHQDPNMHPTAAAA 430
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 47 PQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFA 99
P+ +G + T+++G L P + + L F+ GE++SVK+ K G GFV+F
Sbjct: 90 PRRQGSTDEVKTLWIGDLQPWMDETYLNNCFAHTGEVSSVKVICNKQTGQSEGYGFVEFF 149
Query: 100 NRENAEEALHKLNGTVI--GKQSFRADY 125
+ AE+ L NGT++ + FR ++
Sbjct: 150 SHTTAEKVLQNYNGTIMPNTELPFRLNW 177
>gi|194697962|gb|ACF83065.1| unknown [Zea mays]
gi|414885795|tpg|DAA61809.1| TPA: hypothetical protein ZEAMMB73_995180 [Zea mays]
Length = 320
Score = 188 bits (478), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 117/193 (60%), Positives = 131/193 (67%), Gaps = 31/193 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSRPMRIG ATPRKSSG S S+G GD +NTT+FV
Sbjct: 142 MTEMNGVYCSSRPMRIGPATPRKSSGTSGSNGSAA--RSDG---------GDLTNTTVFV 190
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV++EDLRQ FSQYGEI+SVKIP+GK CGFVQFA R+NAE+AL LNG+ IGKQ+
Sbjct: 191 GGLDPNVSEEDLRQTFSQYGEISSVKIPIGKQCGFVQFAQRKNAEDALQGLNGSTIGKQN 250
Query: 121 -------------FRADYGNQWS--GAYYGG-QVYDGYGY-AIPPPNDPSMYAAAAAAYG 163
FR D GNQW+ G YY Y+GYGY A P DP MY AA AYG
Sbjct: 251 VRLSWGRNPANKQFRGDNGNQWNNGGMYYAAPPFYNGYGYPAAAPFPDPGMY--AAPAYG 308
Query: 164 AYPVYGSHQQQVS 176
AYP YG +QQQVS
Sbjct: 309 AYPFYG-NQQQVS 320
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQF 98
G + +S+ +IFVG L +V D L + FS +Y + K+ + KG GFV+F
Sbjct: 73 GDRRSDSASDHSIFVGDLASDVNDATLLEAFSSRYSSVKGAKVVIDANTGRSKGYGFVRF 132
Query: 99 ANRENAEEALHKLNGTVIGKQSFR 122
+ +A+ ++NG + R
Sbjct: 133 GDDSEKTQAMTEMNGVYCSSRPMR 156
>gi|226492692|ref|NP_001144988.1| uncharacterized protein LOC100278143 [Zea mays]
gi|195649537|gb|ACG44236.1| hypothetical protein [Zea mays]
Length = 436
Score = 188 bits (477), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 117/193 (60%), Positives = 131/193 (67%), Gaps = 31/193 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSRPMRIG ATPRKSSG S S+G GD +NTT+FV
Sbjct: 258 MTEMNGVYCSSRPMRIGPATPRKSSGTSGSNGSAA--RSDG---------GDLTNTTVFV 306
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV++EDLRQ FSQYGEI+SVKIP+GK CGFVQFA R+NAE+AL LNG+ IGKQ+
Sbjct: 307 GGLDPNVSEEDLRQTFSQYGEISSVKIPIGKQCGFVQFAQRKNAEDALQGLNGSTIGKQN 366
Query: 121 -------------FRADYGNQWS--GAYYGG-QVYDGYGY-AIPPPNDPSMYAAAAAAYG 163
FR D GNQW+ G YY Y+GYGY A P DP MY AA AYG
Sbjct: 367 VRLSWGRNPANKQFRGDNGNQWNNGGMYYAAPPFYNGYGYPAAAPFPDPGMY--AAPAYG 424
Query: 164 AYPVYGSHQQQVS 176
AYP YG+ QQQVS
Sbjct: 425 AYPFYGN-QQQVS 436
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +V D L + FS +Y + K+ + KG GFV+F +
Sbjct: 196 ASDHSIFVGDLASDVNDATLLEAFSSRYSSVKGAKVVIDANTGRSKGYGFVRFGDDSEKT 255
Query: 106 EALHKLNGTVIGKQSFR 122
+A+ ++NG + R
Sbjct: 256 QAMTEMNGVYCSSRPMR 272
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 47 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFAN 100
P G N +++VG L + + L F GE+ ++K+ K G GFV+F +
Sbjct: 97 PHQPGQEENKSVWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYS 156
Query: 101 RENAEEALHKLNGTVI--GKQSFRADYGN 127
AE+ L +G ++ Q FR ++ +
Sbjct: 157 HAAAEKVLEGFSGHIMPNTDQPFRLNWAS 185
>gi|194707750|gb|ACF87959.1| unknown [Zea mays]
gi|414885794|tpg|DAA61808.1| TPA: hypothetical protein ZEAMMB73_995180 [Zea mays]
Length = 433
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 117/193 (60%), Positives = 131/193 (67%), Gaps = 31/193 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSRPMRIG ATPRKSSG S S+G GD +NTT+FV
Sbjct: 255 MTEMNGVYCSSRPMRIGPATPRKSSGTSGSNGSAA--RSDG---------GDLTNTTVFV 303
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV++EDLRQ FSQYGEI+SVKIP+GK CGFVQFA R+NAE+AL LNG+ IGKQ+
Sbjct: 304 GGLDPNVSEEDLRQTFSQYGEISSVKIPIGKQCGFVQFAQRKNAEDALQGLNGSTIGKQN 363
Query: 121 -------------FRADYGNQWS--GAYYGG-QVYDGYGY-AIPPPNDPSMYAAAAAAYG 163
FR D GNQW+ G YY Y+GYGY A P DP MY AA AYG
Sbjct: 364 VRLSWGRNPANKQFRGDNGNQWNNGGMYYAAPPFYNGYGYPAAAPFPDPGMY--AAPAYG 421
Query: 164 AYPVYGSHQQQVS 176
AYP YG+ QQQVS
Sbjct: 422 AYPFYGN-QQQVS 433
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQF 98
G + +S+ +IFVG L +V D L + FS +Y + K+ + KG GFV+F
Sbjct: 186 GDRRSDSASDHSIFVGDLASDVNDATLLEAFSSRYSSVKGAKVVIDANTGRSKGYGFVRF 245
Query: 99 ANRENAEEALHKLNGTVIGKQSFR 122
+ +A+ ++NG + R
Sbjct: 246 GDDSEKTQAMTEMNGVYCSSRPMR 269
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Query: 47 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFAN 100
P G N +++VG L + + L F GE+ ++K+ K G GFV+F +
Sbjct: 94 PHQPGQEENKSVWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYS 153
Query: 101 RENAEEALHKLNGTVI--GKQSFRADY 125
AE+ L +G ++ Q FR ++
Sbjct: 154 HAAAEKVLEGFSGHIMPNTDQPFRLNW 180
>gi|82621158|gb|ABB86267.1| DNA binding protein ACBF-like [Solanum tuberosum]
Length = 372
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/131 (67%), Positives = 108/131 (82%), Gaps = 6/131 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
MTEMNG+YCSSRPMR+G ATP+K S QQQ+SSQ GGYASNG+ G QS+GDSSN
Sbjct: 185 MTEMNGIYCSSRPMRVGVATPKKPSA-QQQFSSQAVILSGGYASNGSATHGSQSDGDSSN 243
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TTIFVGGLD +VTDE+LRQ F+Q+GE+ SVKIP GKGCGFVQF++R +A+EA+ KL+G +
Sbjct: 244 TTIFVGGLDSDVTDEELRQSFTQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAI 303
Query: 116 IGKQSFRADYG 126
IGKQ+ R +G
Sbjct: 304 IGKQAVRLSWG 314
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC------GFVQFANRENAEEAL 108
N TI++G L + + L FS GE+ SVKI K GFV+F AE+ L
Sbjct: 32 NKTIWIGDLQQWMDENYLHSCFSHAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVL 91
Query: 109 HKLNGTVI--GKQSFRADY 125
NGT++ +Q FR ++
Sbjct: 92 QSYNGTMMPNAEQPFRLNW 110
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEE 106
S+ +IFVG L +VTD LR F S++ + K+ V KG GFV+F +
Sbjct: 124 SDFSIFVGDLASDVTDTMLRDTFASRFPSVKGAKVVVDANTGHSKGYGFVRFGDESERSR 183
Query: 107 ALHKLNGTVIGKQSFRA 123
A+ ++NG + R
Sbjct: 184 AMTEMNGIYCSSRPMRV 200
>gi|15230291|ref|NP_188544.1| RNA-binding protein 47B [Arabidopsis thaliana]
gi|122246579|sp|Q0WW84.1|RB47B_ARATH RecName: Full=Polyadenylate-binding protein RBP47B;
Short=Poly(A)-binding protein RBP47B; AltName:
Full=RNA-binding protein 47B; Short=AtRBP47B
gi|110741040|dbj|BAE98614.1| putative nuclear acid binding protein [Arabidopsis thaliana]
gi|111074446|gb|ABH04596.1| At3g19130 [Arabidopsis thaliana]
gi|332642675|gb|AEE76196.1| RNA-binding protein 47B [Arabidopsis thaliana]
Length = 435
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/150 (59%), Positives = 113/150 (75%), Gaps = 17/150 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
+TEMNG YCS+R MR+G ATP+++ QQQ+SSQ GG+ SNG+ G G QS+G+S+N
Sbjct: 261 LTEMNGAYCSNRQMRVGIATPKRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTN 320
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TIFVGG+DP+V DEDLRQPFSQ+GE+ SVKIPVGKGCGFVQFA+R++AE+A+ LNGTV
Sbjct: 321 ATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKGCGFVQFADRKSAEDAIESLNGTV 380
Query: 116 IGKQS------------FRADYGNQWSGAY 133
IGK + +R D G QW+G Y
Sbjct: 381 IGKNTVRLSWGRSPNKQWRGDSGQQWNGGY 410
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEA 107
+ ++FVG L P+VTD L + FS +Y + S K+ + KG GFV+F + A
Sbjct: 201 DLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRA 260
Query: 108 LHKLNGTVIGKQSFRA 123
L ++NG + R
Sbjct: 261 LTEMNGAYCSNRQMRV 276
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T++VG L + + L FS GE++SVK+ K G GFV+F +R AEE L
Sbjct: 109 TLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQN 168
Query: 111 LNGTVI--GKQSFRADY 125
+G+V+ Q FR ++
Sbjct: 169 YSGSVMPNSDQPFRINW 185
>gi|21618243|gb|AAM67293.1| nuclear acid binding protein, putative [Arabidopsis thaliana]
Length = 392
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/150 (59%), Positives = 113/150 (75%), Gaps = 17/150 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
+TEMNG YCS+R MR+G ATP+++ QQQ+SSQ GG+ SNG+ G G QS+G+S+N
Sbjct: 218 LTEMNGAYCSNRQMRVGIATPKRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTN 277
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TIFVGG+DP+V DEDLRQPFSQ+GE+ SVKIPVGKGCGFVQFA+R++AE+A+ LNGTV
Sbjct: 278 ATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKGCGFVQFADRKSAEDAIESLNGTV 337
Query: 116 IGKQS------------FRADYGNQWSGAY 133
IGK + +R D G QW+G Y
Sbjct: 338 IGKNTVRLSWGRSPNKQWRGDSGQQWNGGY 367
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEA 107
+ ++FVG L P+VTD L + FS +Y + S K+ + KG GFV+F + A
Sbjct: 158 DLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRA 217
Query: 108 LHKLNGTVIGKQSFRA 123
L ++NG + R
Sbjct: 218 LTEMNGAYCSNRQMRV 233
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T++VG L + + L FS GE++SVK+ K G GFV+F +R AEE L
Sbjct: 66 TLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQN 125
Query: 111 LNGTVI--GKQSFRADY 125
+G+V+ Q FR ++
Sbjct: 126 YSGSVMPNSDQPFRINW 142
>gi|9294614|dbj|BAB02953.1| DNA/RNA binding protein-like [Arabidopsis thaliana]
Length = 489
Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 84/131 (64%), Positives = 107/131 (81%), Gaps = 5/131 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
+TEMNG YCS+R MR+G ATP+++ QQQ+SSQ GG+ SNG+ G G QS+G+S+N
Sbjct: 261 LTEMNGAYCSNRQMRVGIATPKRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTN 320
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TIFVGG+DP+V DEDLRQPFSQ+GE+ SVKIPVGKGCGFVQFA+R++AE+A+ LNGTV
Sbjct: 321 ATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKGCGFVQFADRKSAEDAIESLNGTV 380
Query: 116 IGKQSFRADYG 126
IGK + R +G
Sbjct: 381 IGKNTVRLSWG 391
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEA 107
+ ++FVG L P+VTD L + FS +Y + S K+ + KG GFV+F + A
Sbjct: 201 DLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRA 260
Query: 108 LHKLNGTVIGKQSFRA 123
L ++NG + R
Sbjct: 261 LTEMNGAYCSNRQMRV 276
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T++VG L + + L FS GE++SVK+ K G GFV+F +R AEE L
Sbjct: 109 TLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQN 168
Query: 111 LNGTVI--GKQSFRADYGN 127
+G+V+ Q FR ++ +
Sbjct: 169 YSGSVMPNSDQPFRINWAS 187
>gi|357149687|ref|XP_003575198.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 421
Score = 181 bits (460), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 102/189 (53%), Positives = 131/189 (69%), Gaps = 31/189 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCS+RP+RIG ATPR++SG S +P + QS+GD +N T++V
Sbjct: 251 MTEMNGVYCSTRPIRIGPATPRRTSG-----------DSGSSPPR--QSDGDLTNRTVYV 297
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV++++LR+ F++YG++ASVKIPVGK CGFVQF NR +AEEAL L+G+ IGKQ+
Sbjct: 298 GGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCGFVQFVNRADAEEALQALSGSTIGKQA 357
Query: 121 FRA-------------DYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 167
R D G++ +G YYG Y GYGYA P P+ P+MY AAAYGAYP
Sbjct: 358 VRLSWGRSPASKQPRGDSGHRRNGMYYGTPFYGGYGYASPVPH-PNMY---AAAYGAYPF 413
Query: 168 YGSHQQQVS 176
YG+ QQ VS
Sbjct: 414 YGN-QQLVS 421
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +VTD+ L + F+ +Y + K+ + +G GFV+F + +
Sbjct: 189 ASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDRT 248
Query: 106 EALHKLNGTVIGKQSFR 122
A+ ++NG + R
Sbjct: 249 HAMTEMNGVYCSTRPIR 265
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHK 110
TI+VG L + + L F GE+ ++K+ V +G GFV+F + +AE+AL
Sbjct: 100 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN 159
Query: 111 LNGTVI 116
G V+
Sbjct: 160 FAGHVM 165
>gi|297834824|ref|XP_002885294.1| RNA-binding protein 47B [Arabidopsis lyrata subsp. lyrata]
gi|297331134|gb|EFH61553.1| RNA-binding protein 47B [Arabidopsis lyrata subsp. lyrata]
Length = 435
Score = 181 bits (460), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 87/150 (58%), Positives = 111/150 (74%), Gaps = 17/150 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
+TEMNG YCS+R MR+G ATP+++ QQQ+SSQ GG+ +NG+ G QS+G+S+N
Sbjct: 261 LTEMNGAYCSNRQMRVGVATPKRAIANQQQHSSQALILAGGHGANGSMAHGSQSDGESTN 320
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TIFVGG+D +VTDEDLRQPFSQ+GE+ SVKIPVGKGCGFVQFA R++AE+A+ LNGTV
Sbjct: 321 ATIFVGGIDADVTDEDLRQPFSQFGEVVSVKIPVGKGCGFVQFAERKSAEDAIETLNGTV 380
Query: 116 IGKQS------------FRADYGNQWSGAY 133
IGK + +R D G QW+G Y
Sbjct: 381 IGKNTVRLSWGRSPNKQWRGDSGQQWNGGY 410
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEA 107
+ +IFVG L P+VTD L + F +Y + S K+ + KG GFV+F + A
Sbjct: 201 DLSIFVGDLSPDVTDALLHETFFDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRA 260
Query: 108 LHKLNGTVIGKQSFRA 123
L ++NG + R
Sbjct: 261 LTEMNGAYCSNRQMRV 276
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T++VG L + + L FS GE++SVK+ K G GF++F +R AEE L
Sbjct: 109 TLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFIEFLSRAAAEEVLQN 168
Query: 111 LNGTVI--GKQSFRADY 125
+G+++ Q FR ++
Sbjct: 169 YSGSLMPNSDQPFRINW 185
>gi|297852632|ref|XP_002894197.1| hypothetical protein ARALYDRAFT_474095 [Arabidopsis lyrata subsp.
lyrata]
gi|297340039|gb|EFH70456.1| hypothetical protein ARALYDRAFT_474095 [Arabidopsis lyrata subsp.
lyrata]
Length = 450
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/167 (56%), Positives = 119/167 (71%), Gaps = 16/167 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG +CSSR MR+G ATP++++ Y QQ SQ + G G G S+G+S+N+TIFV
Sbjct: 277 MTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQALTLAGGHGGNGSLSDGESNNSTIFV 336
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLD +VT+EDL QPFSQ+GE+ SVKIPVGKGCGFVQFANR++AEEA+ LNGTVIGK +
Sbjct: 337 GGLDADVTEEDLMQPFSQFGEVVSVKIPVGKGCGFVQFANRQSAEEAIGNLNGTVIGKNT 396
Query: 121 ------------FRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMY 155
+R+D GNQW+G Y GQ Y+ GYA D +MY
Sbjct: 397 VRLSWGRSPNKQWRSDTGNQWNGGYSRGQGYNN-GYA---NQDSNMY 439
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T++VG L + + L FS E++SVK+ K G GFV+F +R AEEAL
Sbjct: 125 TLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQS 184
Query: 111 LNGTVI--GKQSFRADY 125
+G + +Q FR ++
Sbjct: 185 FSGVTMPNAEQPFRLNW 201
Score = 42.4 bits (98), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEA 107
+ +IFVG L P+V+D L + F+ +Y + K+ + KG GFV+F + A
Sbjct: 217 DLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRA 276
Query: 108 LHKLNGTVIGKQSFRADYGNQWSGAYYGGQ 137
+ ++NG + R A YG Q
Sbjct: 277 MTEMNGAFCSSRQMRVGIATPKRAAAYGQQ 306
>gi|255544854|ref|XP_002513488.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223547396|gb|EEF48891.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 412
Score = 179 bits (453), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 101/189 (53%), Positives = 125/189 (66%), Gaps = 22/189 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG---YASNGAPGQGPQSEGDSSNTT 57
MTEMNGV+CS+RPMRI AATP+K++ YQQQY++ + AP Q ++ D +NTT
Sbjct: 174 MTEMNGVFCSTRPMRISAATPKKTAAYQQQYATAKAIYPLPAYTAPVQVVPADNDITNTT 233
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIG 117
IFVG LDPNVT+E+LR F Q+GEI VKIPVG+GCGFVQFA R +AEEA+ ++ G VIG
Sbjct: 234 IFVGNLDPNVTEEELRPIFLQFGEIVYVKIPVGRGCGFVQFATRASAEEAIQRMQGHVIG 293
Query: 118 KQSFRADYG----------NQWSGAYYG-GQVYDGYGYAIPPPNDPSMYAAAAAAYGAYP 166
+Q R +G +QWS AYYG GQ YD Y Y DPS+Y AYGAY
Sbjct: 294 QQPVRISWGRKQARSTLILDQWS-AYYGYGQGYDAYAYG--ATQDPSLY-----AYGAYA 345
Query: 167 VYGSHQQQV 175
Y + QQV
Sbjct: 346 GYPQYPQQV 354
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L V + L F+ GE+ S+KI K G GFV+F + AE L
Sbjct: 23 TLWIGDLQYWVDENYLSSCFAHTGEVLSIKIIRNKITGQPEGYGFVEFVSHVAAERILQT 82
Query: 111 LNGTVI--GKQSFRADYGN 127
NGT + +Q+FR ++ +
Sbjct: 83 YNGTQMPGTEQTFRLNWAS 101
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALH 109
+IFVG L P+VTD L++ F + Y + K+ KG GFV+F + A+
Sbjct: 116 SIFVGDLSPDVTDYLLQETFRANYPSVRGAKVVTDPNTGRSKGYGFVKFGDENERNRAMT 175
Query: 110 KLNGTVIGKQSFR 122
++NG + R
Sbjct: 176 EMNGVFCSTRPMR 188
>gi|15222783|ref|NP_175383.1| RNA-binding protein 47A [Arabidopsis thaliana]
gi|378522727|sp|F4I3B3.1|RB47A_ARATH RecName: Full=Polyadenylate-binding protein RBP47A;
Short=Poly(A)-binding protein RBP47A; AltName:
Full=RNA-binding protein 47A; Short=AtRBP47A
gi|332194327|gb|AEE32448.1| RNA-binding protein 47A [Arabidopsis thaliana]
Length = 445
Score = 178 bits (452), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 94/167 (56%), Positives = 118/167 (70%), Gaps = 16/167 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG +CSSR MR+G ATP++++ Y QQ SQ + G G G S+G+S+N+TIFV
Sbjct: 272 MTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQALTLAGGHGGNGSMSDGESNNSTIFV 331
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLD +VT+EDL QPFS +GE+ SVKIPVGKGCGFVQFANR++AEEA+ LNGTVIGK +
Sbjct: 332 GGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQFANRQSAEEAIGNLNGTVIGKNT 391
Query: 121 ------------FRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMY 155
+R+D GNQW+G Y GQ Y+ GYA D +MY
Sbjct: 392 VRLSWGRSPNKQWRSDSGNQWNGGYSRGQGYNN-GYA---NQDSNMY 434
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T++VG L + + L FS E++SVK+ K G GFV+F +R AEEAL
Sbjct: 120 TLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQS 179
Query: 111 LNGTVI--GKQSFRADY 125
+G + +Q FR ++
Sbjct: 180 FSGVTMPNAEQPFRLNW 196
Score = 42.4 bits (98), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEA 107
+ +IFVG L P+V+D L + F+ +Y + K+ + KG GFV+F + A
Sbjct: 212 DLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRA 271
Query: 108 LHKLNGTVIGKQSFRADYGNQWSGAYYGGQ 137
+ ++NG + R A YG Q
Sbjct: 272 MTEMNGAFCSSRQMRVGIATPKRAAAYGQQ 301
>gi|224104133|ref|XP_002313332.1| predicted protein [Populus trichocarpa]
gi|222849740|gb|EEE87287.1| predicted protein [Populus trichocarpa]
Length = 415
Score = 178 bits (451), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 100/192 (52%), Positives = 125/192 (65%), Gaps = 25/192 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY---ASNGAPGQGPQSEGDSSNTT 57
MTEMNGV+CS+RPMRI ATP+K++ +QQQY+ + + AP Q ++GD +NTT
Sbjct: 172 MTEMNGVFCSTRPMRISMATPKKTTSFQQQYAVPKAFYPAPAYTAPVQVVSADGDVTNTT 231
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIG 117
IFVG LDPN T+EDLRQ F Q GEIASVKIP G+GCGFVQFA R +AEEA+ ++ G VIG
Sbjct: 232 IFVGNLDPNATEEDLRQTFLQLGEIASVKIPAGRGCGFVQFATRTSAEEAIQRMQGHVIG 291
Query: 118 KQSFRADYG-------------NQWSGAYYG-GQVYDGYGYAIPPPNDPSMYAAAAAAYG 163
+Q R +G +QW+ AYYG GQ YD Y Y +DPS+Y AY
Sbjct: 292 QQPVRISWGKKQDLTATWGQQVDQWN-AYYGYGQGYDAYAYG--GTHDPSLY-----AYN 343
Query: 164 AYPVYGSHQQQV 175
AY Y + QQV
Sbjct: 344 AYAGYPQYPQQV 355
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEALH 109
+IFVG L P+VTD L++ F Y + K+ KG GFV+FA+ A+
Sbjct: 114 SIFVGDLAPDVTDYLLQETFRVHYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMT 173
Query: 110 KLNGTVIGKQSFR 122
++NG + R
Sbjct: 174 EMNGVFCSTRPMR 186
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 38 ASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------ 91
A+ APG Q T+++G L + L F+ GE+ S+KI K
Sbjct: 2 AAPTAPGGYHQPATLEEVRTLWIGDLQYWADESYLTSCFAHTGEVVSIKIIRNKLTGQPE 61
Query: 92 GCGFVQFANRENAEEALHKLNGTVI--GKQSFRADYGN 127
G GFV+F + AE L NGT + +Q+FR ++ +
Sbjct: 62 GYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWAS 99
>gi|414589689|tpg|DAA40260.1| TPA: hypothetical protein ZEAMMB73_589753 [Zea mays]
Length = 424
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/195 (58%), Positives = 126/195 (64%), Gaps = 33/195 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSRPMRIG ATPRKSSG S GD +NTT+FV
Sbjct: 244 MTEMNGVYCSSRPMRIGPATPRKSSGTSGSNGSSAR-----------PDGGDLTNTTVFV 292
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDP+V++EDLRQ FSQYGEI+SVKIPVGK CGFVQFA R+NAE+AL LNG+ IGKQ+
Sbjct: 293 GGLDPDVSEEDLRQAFSQYGEISSVKIPVGKQCGFVQFAQRKNAEDALQGLNGSTIGKQA 352
Query: 121 -------------FRADYGN-QWS--GAYYGGQVY--DGYGY-AIPPPNDPSMYAAAAAA 161
FR D GN QW G YY + GYGY A P DP MY AA A
Sbjct: 353 VRLSWGRNPANKQFRGDNGNMQWKNGGVYYAAPPFYNGGYGYPAAAPFPDPGMY--AAPA 410
Query: 162 YGAYPVYGSHQQQVS 176
YGAYP YG +QQQVS
Sbjct: 411 YGAYPFYG-NQQQVS 424
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Query: 47 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFAN 100
P G N TI+VG L + + L F GE+ ++K+ K G GFV+F +
Sbjct: 83 PHQAGQEENKTIWVGDLHFWMDENYLHNCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYS 142
Query: 101 RENAEEALHKLNGTVI--GKQSFRADYGN 127
AE L +G ++ Q FR ++ +
Sbjct: 143 HAAAERVLEGFSGHIMPNTDQPFRLNWAS 171
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +V D L + FS +Y + K+ + KG GFV+F +
Sbjct: 182 ASDHSIFVGDLASDVNDATLLEVFSSRYSSVKGAKVVIDANTGRSKGYGFVRFGDDSEKT 241
Query: 106 EALHKLNGTVIGKQSFR 122
A+ ++NG + R
Sbjct: 242 HAMTEMNGVYCSSRPMR 258
>gi|219888851|gb|ACL54800.1| unknown [Zea mays]
gi|414589690|tpg|DAA40261.1| TPA: hypothetical protein ZEAMMB73_589753 [Zea mays]
Length = 322
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/195 (58%), Positives = 126/195 (64%), Gaps = 33/195 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSRPMRIG ATPRKSSG S GD +NTT+FV
Sbjct: 142 MTEMNGVYCSSRPMRIGPATPRKSSGTSGSNGSSA-----------RPDGGDLTNTTVFV 190
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDP+V++EDLRQ FSQYGEI+SVKIPVGK CGFVQFA R+NAE+AL LNG+ IGKQ+
Sbjct: 191 GGLDPDVSEEDLRQAFSQYGEISSVKIPVGKQCGFVQFAQRKNAEDALQGLNGSTIGKQA 250
Query: 121 -------------FRADYGN-QWS--GAYYGGQVY--DGYGY-AIPPPNDPSMYAAAAAA 161
FR D GN QW G YY + GYGY A P DP MY AA A
Sbjct: 251 VRLSWGRNPANKQFRGDNGNMQWKNGGVYYAAPPFYNGGYGYPAAAPFPDPGMY--AAPA 308
Query: 162 YGAYPVYGSHQQQVS 176
YGAYP YG +QQQVS
Sbjct: 309 YGAYPFYG-NQQQVS 322
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +V D L + FS +Y + K+ + KG GFV+F +
Sbjct: 80 ASDHSIFVGDLASDVNDATLLEVFSSRYSSVKGAKVVIDANTGRSKGYGFVRFGDDSEKT 139
Query: 106 EALHKLNGTVIGKQSFR 122
A+ ++NG + R
Sbjct: 140 HAMTEMNGVYCSSRPMR 156
>gi|359478387|ref|XP_003632115.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Vitis vinifera]
Length = 438
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 98/190 (51%), Positives = 123/190 (64%), Gaps = 23/190 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGA-----PGQGPQSEGDSSN 55
MTEMNGVYCS+RPMRI AATP+K++G+QQQY++ P Q ++ D +N
Sbjct: 193 MTEMNGVYCSTRPMRISAATPKKTTGFQQQYAAAAKALYPAPAYTTPPLQALPADNDINN 252
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TTIFVG LDPNVT+E+L+Q FSQ+GE+ VKIP G+GCGFVQF R +AEEA+ ++ GTV
Sbjct: 253 TTIFVGNLDPNVTEEELKQIFSQFGELVYVKIPAGRGCGFVQFGTRTSAEEAIQRMQGTV 312
Query: 116 IGKQSFRADYG----------NQWSGAYYG-GQVYDGYGYAIPPPNDPSMYAAAAAAYGA 164
IG+ R +G +QWS AYYG GQ YD Y Y DPS+Y AYGA
Sbjct: 313 IGQLVVRISWGRSPTAKQADPSQWSSAYYGYGQGYDAYPYG--ATQDPSLY-----AYGA 365
Query: 165 YPVYGSHQQQ 174
Y Y + QQ
Sbjct: 366 YAGYLQYPQQ 375
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L V + L F+ GE+ S+KI K G GFV+F + AE L
Sbjct: 42 TLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQA 101
Query: 111 LNGTVI--GKQSFRADYGN 127
NGT + +Q+FR ++ +
Sbjct: 102 YNGTQMPGTEQTFRLNWAS 120
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFANRENAEEALH 109
+IFVG L P+VTD L++ F +QY + K+ KG GFV+F++ A+
Sbjct: 135 SIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMT 194
Query: 110 KLNGTVIGKQSFR 122
++NG + R
Sbjct: 195 EMNGVYCSTRPMR 207
>gi|148910710|gb|ABR18422.1| unknown [Picea sitchensis]
Length = 418
Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 104/189 (55%), Positives = 125/189 (66%), Gaps = 28/189 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG++CSSRPMR G AT +K++G+QQ Y A+ P Q S+ D +NTTIFV
Sbjct: 231 MTEMNGMFCSSRPMRTGPATTKKTTGFQQPYPKA---AAAAVPPQVVASDNDPNNTTIFV 287
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDP+VTDE LRQ F Q+GE+ VKIPVGK CGFVQF NR +AEEAL L+GTV+G+Q+
Sbjct: 288 GGLDPSVTDEMLRQLFGQFGELVHVKIPVGKRCGFVQFNNRASAEEALQMLHGTVLGQQA 347
Query: 121 FRADYG---------------------NQWSG-AYYG-GQVYD-GYGYAIPPPNDPSMYA 156
R +G NQW+G AYYG GQ YD GYGYA P P DP+MY+
Sbjct: 348 IRLSWGRSPANKQVQTPGWVQPQQPDPNQWNGAAYYGYGQGYDAGYGYA-PQPQDPNMYS 406
Query: 157 AAAAAYGAY 165
A AYG Y
Sbjct: 407 YAPYAYGNY 415
Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Query: 58 IFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALHK 110
IFVG L +VTD L++ F S+Y + K+ KG GFV+F + A+ +
Sbjct: 174 IFVGDLASDVTDYLLQETFRSRYQTVKGAKVVSDRVTGRSKGYGFVRFGDENEQVRAMTE 233
Query: 111 LNGTVIGKQSFRA 123
+NG + R
Sbjct: 234 MNGMFCSSRPMRT 246
>gi|116789456|gb|ABK25253.1| unknown [Picea sitchensis]
Length = 487
Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 99/179 (55%), Positives = 119/179 (66%), Gaps = 29/179 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG++CSSRPMR G AT +K++G+QQ Y A+ P Q S+ D +NTTIFV
Sbjct: 231 MTEMNGMFCSSRPMRTGPATTKKTTGFQQPYPK----AAAAVPPQVVASDNDPNNTTIFV 286
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDP+VTDE LRQ F Q+GE+ VKIPVGK CGFVQF NR +AEEAL L+GTV+G+Q+
Sbjct: 287 GGLDPSVTDEMLRQLFGQFGELVHVKIPVGKRCGFVQFNNRASAEEALQMLHGTVLGQQA 346
Query: 121 FRADYG---------------------NQWSG-AYYG-GQVYD-GYGYAIPPPNDPSMY 155
R +G NQW+G AYYG GQ YD GYGYA P P DP+MY
Sbjct: 347 IRLSWGRSPANKQVQTPGWVQPQQPDPNQWNGAAYYGYGQGYDAGYGYA-PQPQDPNMY 404
Score = 36.6 bits (83), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 16/114 (14%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
GA P Y+ +++ G P GP + IFVG L +VTD L++ F
Sbjct: 142 GAQMPNTEQFYRLNWATFG--IGEKRPEMGP-------DYPIFVGDLASDVTDYLLQETF 192
Query: 77 -SQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSFRA 123
S+Y + K+ KG GFV+F + A+ ++NG + R
Sbjct: 193 RSRYQTVKGAKVVSDRVTGRSKGYGFVRFGDENEQVRAMTEMNGMFCSSRPMRT 246
>gi|222628961|gb|EEE61093.1| hypothetical protein OsJ_14988 [Oryza sativa Japonica Group]
Length = 373
Score = 175 bits (443), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 101/185 (54%), Positives = 128/185 (69%), Gaps = 30/185 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCS+RP+RIG ATPR+SSG + PG S+GDS+N T++V
Sbjct: 203 MTEMNGAYCSTRPIRIGPATPRRSSGDSGSST----------PGH---SDGDSTNRTVYV 249
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV++++LR+ F++YG++ASVKIP+GK CGFVQF +R +AEEAL LNG+VIGKQ+
Sbjct: 250 GGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSVIGKQA 309
Query: 121 F-------------RADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 167
RAD G++ + YYG Y GYGYA P P+ P+MY AAAYGAYPV
Sbjct: 310 VRLSWGRSPSHKQSRADSGSRRNNMYYGTPFYGGYGYASPVPH-PNMY---AAAYGAYPV 365
Query: 168 YGSHQ 172
YGS Q
Sbjct: 366 YGSQQ 370
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +VTDE L + F+ +Y + K+ + +G GFV+F + +
Sbjct: 141 ASDYSIFVGDLAADVTDEMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKS 200
Query: 106 EALHKLNGTVIGKQSFR 122
A+ ++NG + R
Sbjct: 201 HAMTEMNGAYCSTRPIR 217
>gi|125548504|gb|EAY94326.1| hypothetical protein OsI_16094 [Oryza sativa Indica Group]
Length = 426
Score = 175 bits (443), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 101/185 (54%), Positives = 128/185 (69%), Gaps = 30/185 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCS+RP+RIG ATPR+SSG + PG S+GDS+N T++V
Sbjct: 256 MTEMNGAYCSTRPIRIGPATPRRSSGDSGSST----------PGH---SDGDSTNRTVYV 302
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV++++LR+ F++YG++ASVKIP+GK CGFVQF +R +AEEAL LNG+VIGKQ+
Sbjct: 303 GGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSVIGKQA 362
Query: 121 F-------------RADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 167
RAD G++ + YYG Y GYGYA P P+ P+MY AAAYGAYPV
Sbjct: 363 VRLSWGRSPSHKQSRADSGSRRNNMYYGTPFYGGYGYASPVPH-PNMY---AAAYGAYPV 418
Query: 168 YGSHQ 172
YGS Q
Sbjct: 419 YGSQQ 423
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +VTDE L + F+ +Y + K+ + +G GFV+F + +
Sbjct: 194 ASDYSIFVGDLAADVTDEMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKS 253
Query: 106 EALHKLNGTVIGKQSFR 122
A+ ++NG + R
Sbjct: 254 HAMTEMNGAYCSTRPIR 270
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENA 104
G N TI+VG L + + L F GE+ ++K+ + G GFV+F + +A
Sbjct: 99 GCEENKTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFYSHGSA 158
Query: 105 EEALHKLNGTVI 116
E+AL G V+
Sbjct: 159 EKALQNFTGHVM 170
>gi|116310076|emb|CAH67097.1| H0818E04.14 [Oryza sativa Indica Group]
Length = 426
Score = 175 bits (443), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 101/185 (54%), Positives = 128/185 (69%), Gaps = 30/185 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCS+RP+RIG ATPR+SSG + PG S+GDS+N T++V
Sbjct: 256 MTEMNGAYCSTRPIRIGPATPRRSSGDSGSST----------PGH---SDGDSTNRTVYV 302
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV++++LR+ F++YG++ASVKIP+GK CGFVQF +R +AEEAL LNG+VIGKQ+
Sbjct: 303 GGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSVIGKQA 362
Query: 121 F-------------RADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 167
RAD G++ + YYG Y GYGYA P P+ P+MY AAAYGAYPV
Sbjct: 363 VRLSWGRSPSHKQSRADSGSRRNNMYYGTPFYGGYGYASPVPH-PNMY---AAAYGAYPV 418
Query: 168 YGSHQ 172
YGS Q
Sbjct: 419 YGSQQ 423
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +VTDE L + F+ +Y + K+ + +G GFV+F + +
Sbjct: 194 ASDYSIFVGDLAADVTDEMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKS 253
Query: 106 EALHKLNGTVIGKQSFR 122
A+ ++NG + R
Sbjct: 254 HAMTEMNGAYCSTRPIR 270
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENA 104
G N TI+VG L + + L F GE+ ++K+ + G GFV+F + +A
Sbjct: 99 GCEENKTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFYSHGSA 158
Query: 105 EEALHKLNGTVI 116
E+AL G V+
Sbjct: 159 EKALQNFTGHVM 170
>gi|242073268|ref|XP_002446570.1| hypothetical protein SORBIDRAFT_06g018280 [Sorghum bicolor]
gi|241937753|gb|EES10898.1| hypothetical protein SORBIDRAFT_06g018280 [Sorghum bicolor]
Length = 423
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/189 (54%), Positives = 132/189 (69%), Gaps = 31/189 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M+EMNGVYCS+RP+RIG ATPR+SSG + PG S+GDSSN T++V
Sbjct: 253 MSEMNGVYCSTRPIRIGPATPRRSSGDSGSST----------PGH---SDGDSSNRTVYV 299
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV++++LR+ F++YG++ASVKIP+GK CGFVQFA+R +AEEAL LNG++IGKQ+
Sbjct: 300 GGLDPNVSEDELRKAFAKYGDLASVKIPLGKQCGFVQFASRTDAEEALQGLNGSLIGKQA 359
Query: 121 FRA-------------DYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 167
R D GN+ + YYG Y GYGYA P P+ P+MY AAAYGAYP+
Sbjct: 360 VRLSWGRSPSHKQSRGDSGNRRNNMYYGTPFYGGYGYASPVPH-PNMY---AAAYGAYPM 415
Query: 168 YGSHQQQVS 176
YG +QQ VS
Sbjct: 416 YG-NQQLVS 423
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +VTDE L + F S+Y + K+ + +G GFV+F + +
Sbjct: 191 ASDHSIFVGDLAADVTDEMLLELFSSKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKS 250
Query: 106 EALHKLNGTVIGKQSFR 122
A+ ++NG + R
Sbjct: 251 HAMSEMNGVYCSTRPIR 267
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFV 96
P G G N TI+VG L + + L F GE+ ++K+ + G GFV
Sbjct: 88 PAAGSGGNGCEENKTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGYGFV 147
Query: 97 QFANRENAEEALHKLNGTVI 116
+F + +AE+AL G V+
Sbjct: 148 EFFSHASAEKALQNFTGHVM 167
>gi|297602825|ref|NP_001052934.2| Os04g0449900 [Oryza sativa Japonica Group]
gi|255675510|dbj|BAF14848.2| Os04g0449900 [Oryza sativa Japonica Group]
Length = 387
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/189 (55%), Positives = 131/189 (69%), Gaps = 31/189 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCS+RP+RIG ATPR+SSG + PG S+GDS+N T++V
Sbjct: 217 MTEMNGAYCSTRPIRIGPATPRRSSGDSGSST----------PGH---SDGDSTNRTVYV 263
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV++++LR+ F++YG++ASVKIP+GK CGFVQF +R +AEEAL LNG+VIGKQ+
Sbjct: 264 GGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSVIGKQA 323
Query: 121 F-------------RADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 167
RAD G++ + YYG Y GYGYA P P+ P+MY AAAYGAYPV
Sbjct: 324 VRLSWGRSPSHKQSRADSGSRRNNMYYGTPFYGGYGYASPVPH-PNMY---AAAYGAYPV 379
Query: 168 YGSHQQQVS 176
YGS QQ VS
Sbjct: 380 YGS-QQLVS 387
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +VTDE L + F+ +Y + K+ + +G GFV+F + +
Sbjct: 155 ASDYSIFVGDLAADVTDEMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKS 214
Query: 106 EALHKLNGTVIGKQSFR 122
A+ ++NG + R
Sbjct: 215 HAMTEMNGAYCSTRPIR 231
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENA 104
G N TI+VG L + + L F GE+ ++K+ + G GFV+F + +A
Sbjct: 60 GCEENKTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFYSHGSA 119
Query: 105 EEALHKLNGTVI 116
E+AL G V+
Sbjct: 120 EKALQNFTGHVM 131
>gi|449469386|ref|XP_004152401.1| PREDICTED: polyadenylate-binding protein RBP47B'-like [Cucumis
sativus]
Length = 422
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/199 (51%), Positives = 124/199 (62%), Gaps = 34/199 (17%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQ-----SEGDSSN 55
M+EMNGVYCS+RPMRI AATP+K+ G QQQYS G A P ++ D++N
Sbjct: 172 MSEMNGVYCSTRPMRISAATPKKTIGVQQQYSL--GKAMYPVPAYTTSVPVLPADYDANN 229
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TTIFVG LDPN+T+E+L+Q F Q+GEIA VKIP GKGCGFVQF R +AEEA+ K+ G +
Sbjct: 230 TTIFVGNLDPNITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKI 289
Query: 116 IGKQSFRADYG------------------NQWSGAYYG-GQVYDGYGYAIPPPNDPSMYA 156
IG+Q R +G NQWS AYYG G YD YGY + DPS+Y
Sbjct: 290 IGQQVVRTSWGRNPAAKQDLTTWGQQVDPNQWS-AYYGYGGTYDAYGYGV--VQDPSLY- 345
Query: 157 AAAAAYGAYPVYGSHQQQV 175
YGAY Y S+ QQV
Sbjct: 346 ----GYGAYSGYASYPQQV 360
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALH 109
+IFVG L P+VTD L++ F +QY + K+ KG GFV+FA+ A+
Sbjct: 114 SIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMS 173
Query: 110 KLNGTVIGKQSFR 122
++NG + R
Sbjct: 174 EMNGVYCSTRPMR 186
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L V + L F+ GE+ S+KI K G GFV+F + AE L
Sbjct: 21 TLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQT 80
Query: 111 LNGTVI--GKQSFRADYGN 127
NGT + +Q+FR ++ +
Sbjct: 81 YNGTQMPGTEQTFRLNWAS 99
>gi|294463675|gb|ADE77364.1| unknown [Picea sitchensis]
Length = 253
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/198 (52%), Positives = 125/198 (63%), Gaps = 30/198 (15%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY---ASNGAPGQGPQSEGDSSNTT 57
MTEMN VYCS+RPMRI AATP+KS+G+QQQY+ + Y A + P Q QS+ D +NTT
Sbjct: 1 MTEMNNVYCSTRPMRISAATPKKSAGFQQQYTPKVAYQTPAYSAPPAQVFQSD-DQNNTT 59
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIG 117
IFVGGLDP V+DEDLRQ F Q+GE+ VKIPV KGCGFVQF NR AEEAL +++GTVIG
Sbjct: 60 IFVGGLDPTVSDEDLRQIFGQFGELVYVKIPVNKGCGFVQFGNRACAEEALQRVHGTVIG 119
Query: 118 KQSFRADYG--------------------NQWSGAYYGGQVYDGYGYAIPPPNDPSMYAA 157
+Q+ R +G NQW+GAYYG P DPS Y
Sbjct: 120 QQTVRLSWGRSPATKQDQPAGWGQAQADANQWNGAYYGYGQGYDAYGYA-APQDPSTY-- 176
Query: 158 AAAAYGAYPVYGSHQQQV 175
YGAYP G++QQQ
Sbjct: 177 ---GYGAYPSSGNYQQQT 191
>gi|297746331|emb|CBI16387.3| unnamed protein product [Vitis vinifera]
Length = 445
Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 98/199 (49%), Positives = 123/199 (61%), Gaps = 32/199 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGA-----PGQGPQSEGDSSN 55
MTEMNGVYCS+RPMRI AATP+K++G+QQQY++ P Q ++ D +N
Sbjct: 193 MTEMNGVYCSTRPMRISAATPKKTTGFQQQYAAAAKALYPAPAYTTPPLQALPADNDINN 252
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TTIFVG LDPNVT+E+L+Q FSQ+GE+ VKIP G+GCGFVQF R +AEEA+ ++ GTV
Sbjct: 253 TTIFVGNLDPNVTEEELKQIFSQFGELVYVKIPAGRGCGFVQFGTRTSAEEAIQRMQGTV 312
Query: 116 IGKQSFRADYG-------------------NQWSGAYYG-GQVYDGYGYAIPPPNDPSMY 155
IG+ R +G +QWS AYYG GQ YD Y Y DPS+Y
Sbjct: 313 IGQLVVRISWGRSPTAKQDLPGSWGQQADPSQWSSAYYGYGQGYDAYPYG--ATQDPSLY 370
Query: 156 AAAAAAYGAYPVYGSHQQQ 174
AYGAY Y + QQ
Sbjct: 371 -----AYGAYAGYLQYPQQ 384
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L V + L F+ GE+ S+KI K G GFV+F + AE L
Sbjct: 42 TLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQA 101
Query: 111 LNGTVI--GKQSFRADYGN 127
NGT + +Q+FR ++ +
Sbjct: 102 YNGTQMPGTEQTFRLNWAS 120
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFANRENAEEALH 109
+IFVG L P+VTD L++ F +QY + K+ KG GFV+F++ A+
Sbjct: 135 SIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMT 194
Query: 110 KLNGTVIGKQSFR 122
++NG + R
Sbjct: 195 EMNGVYCSTRPMR 207
>gi|225435468|ref|XP_002285479.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 447
Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 98/199 (49%), Positives = 123/199 (61%), Gaps = 32/199 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGA-----PGQGPQSEGDSSN 55
MTEMNGVYCS+RPMRI AATP+K++G+QQQY++ P Q ++ D +N
Sbjct: 193 MTEMNGVYCSTRPMRISAATPKKTTGFQQQYAAAAKALYPAPAYTTPPLQALPADNDINN 252
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TTIFVG LDPNVT+E+L+Q FSQ+GE+ VKIP G+GCGFVQF R +AEEA+ ++ GTV
Sbjct: 253 TTIFVGNLDPNVTEEELKQIFSQFGELVYVKIPAGRGCGFVQFGTRTSAEEAIQRMQGTV 312
Query: 116 IGKQSFRADYG-------------------NQWSGAYYG-GQVYDGYGYAIPPPNDPSMY 155
IG+ R +G +QWS AYYG GQ YD Y Y DPS+Y
Sbjct: 313 IGQLVVRISWGRSPTAKQDLPGSWGQQADPSQWSSAYYGYGQGYDAYPYG--ATQDPSLY 370
Query: 156 AAAAAAYGAYPVYGSHQQQ 174
AYGAY Y + QQ
Sbjct: 371 -----AYGAYAGYLQYPQQ 384
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L V + L F+ GE+ S+KI K G GFV+F + AE L
Sbjct: 42 TLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQA 101
Query: 111 LNGTVI--GKQSFRADYGN 127
NGT + +Q+FR ++ +
Sbjct: 102 YNGTQMPGTEQTFRLNWAS 120
Score = 42.0 bits (97), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFANRENAEEALH 109
+IFVG L P+VTD L++ F +QY + K+ KG GFV+F++ A+
Sbjct: 135 SIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMT 194
Query: 110 KLNGTVIGKQSFR 122
++NG + R
Sbjct: 195 EMNGVYCSTRPMR 207
>gi|218193173|gb|EEC75600.1| hypothetical protein OsI_12307 [Oryza sativa Indica Group]
Length = 406
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/185 (54%), Positives = 123/185 (66%), Gaps = 26/185 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCSSRPMRIG A+ +K+ G QQQ S+ Y + QG S+ D +NTT+FV
Sbjct: 219 MTEMNGQYCSSRPMRIGPASNKKNIGGQQQPSAT--YQNT----QGTDSDSDPNNTTVFV 272
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDP+VTDE L+Q FS YGE+ VKIPVGK CGFVQ++NR +AEEA+ LNG+ +G QS
Sbjct: 273 GGLDPSVTDEVLKQAFSPYGELVYVKIPVGKRCGFVQYSNRASAEEAIRMLNGSQLGGQS 332
Query: 121 FRADYG------------NQWSGAYYG--GQVYDGYGYAIPPPNDPSMYAAAAAAYGAYP 166
R +G NQW+ YYG Q YD YGYA PP DP+MY AY AYP
Sbjct: 333 IRLSWGRSPGNKQPQQDQNQWNAGYYGYPPQGYDPYGYAR-PPQDPAMY-----AYAAYP 386
Query: 167 VYGSH 171
YG++
Sbjct: 387 GYGNY 391
Score = 42.4 bits (98), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFV 96
G G + D S+ TIFVG L +VTD L+ F + Y + K+ KG GFV
Sbjct: 148 GAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAHYQSVKGAKVVFDRSTGRSKGYGFV 207
Query: 97 QFANRENAEEALHKLNGTVIGKQSFR 122
+F + + A+ ++NG + R
Sbjct: 208 KFGDLDEQTRAMTEMNGQYCSSRPMR 233
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 11/98 (11%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + + L FSQ GE+ S KI K G GF++F + AE+ L
Sbjct: 68 TLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQVLQG 127
Query: 111 LNGTVI--GKQSFRADYGNQWSGAYYGGQVYDGYGYAI 146
NG ++ G Q F+ ++ +G G DG Y I
Sbjct: 128 YNGQMMPNGNQVFKLNWATSGAGEKRGD---DGSDYTI 162
>gi|108709398|gb|ABF97193.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 406
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/185 (54%), Positives = 123/185 (66%), Gaps = 26/185 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCSSRPMRIG A+ +K+ G QQQ S+ Y + QG S+ D +NTT+FV
Sbjct: 219 MTEMNGQYCSSRPMRIGPASNKKNIGGQQQPSAT--YQNT----QGTDSDSDPNNTTVFV 272
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDP+VTDE L+Q FS YGE+ VKIPVGK CGFVQ++NR +AEEA+ LNG+ +G QS
Sbjct: 273 GGLDPSVTDEVLKQAFSPYGELVYVKIPVGKRCGFVQYSNRASAEEAIRMLNGSQLGGQS 332
Query: 121 FRADYG------------NQWSGAYYG--GQVYDGYGYAIPPPNDPSMYAAAAAAYGAYP 166
R +G NQW+ YYG Q YD YGY + PP DP+MY AY AYP
Sbjct: 333 IRLSWGRSPGNKQPQQDQNQWNAGYYGYPPQGYDPYGY-VRPPQDPAMY-----AYAAYP 386
Query: 167 VYGSH 171
YG++
Sbjct: 387 GYGNY 391
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFV 96
G G + D S+ TIFVG L +VTD L+ F + Y + K+ KG GFV
Sbjct: 148 GAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAHYQSVKGAKVVFDRSTGRSKGYGFV 207
Query: 97 QFANRENAEEALHKLNGTVIGKQSFR 122
+F + + A+ ++NG + R
Sbjct: 208 KFGDLDEQTRAMTEMNGQYCSSRPMR 233
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 11/98 (11%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + + L FSQ GE+ S KI K G GF++F + AE+ L
Sbjct: 68 TLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQVLQG 127
Query: 111 LNGTVI--GKQSFRADYGNQWSGAYYGGQVYDGYGYAI 146
NG ++ G Q F+ ++ +G G DG Y I
Sbjct: 128 YNGQMMPNGNQVFKLNWATSGAGEKRGD---DGSDYTI 162
>gi|12583812|gb|AAG59664.1|AC084319_22 putative RNA binding protein [Oryza sativa Japonica Group]
gi|108709397|gb|ABF97192.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|215678704|dbj|BAG95141.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 402
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/185 (54%), Positives = 123/185 (66%), Gaps = 26/185 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCSSRPMRIG A+ +K+ G QQQ S+ Y + QG S+ D +NTT+FV
Sbjct: 219 MTEMNGQYCSSRPMRIGPASNKKNIGGQQQPSAT--YQNT----QGTDSDSDPNNTTVFV 272
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDP+VTDE L+Q FS YGE+ VKIPVGK CGFVQ++NR +AEEA+ LNG+ +G QS
Sbjct: 273 GGLDPSVTDEVLKQAFSPYGELVYVKIPVGKRCGFVQYSNRASAEEAIRMLNGSQLGGQS 332
Query: 121 FRADYG------------NQWSGAYYG--GQVYDGYGYAIPPPNDPSMYAAAAAAYGAYP 166
R +G NQW+ YYG Q YD YGY + PP DP+MY AY AYP
Sbjct: 333 IRLSWGRSPGNKQPQQDQNQWNAGYYGYPPQGYDPYGY-VRPPQDPAMY-----AYAAYP 386
Query: 167 VYGSH 171
YG++
Sbjct: 387 GYGNY 391
Score = 42.4 bits (98), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFV 96
G G + D S+ TIFVG L +VTD L+ F + Y + K+ KG GFV
Sbjct: 148 GAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAHYQSVKGAKVVFDRSTGRSKGYGFV 207
Query: 97 QFANRENAEEALHKLNGTVIGKQSFR 122
+F + + A+ ++NG + R
Sbjct: 208 KFGDLDEQTRAMTEMNGQYCSSRPMR 233
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 11/98 (11%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + + L FSQ GE+ S KI K G GF++F + AE+ L
Sbjct: 68 TLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQVLQG 127
Query: 111 LNGTVI--GKQSFRADYGNQWSGAYYGGQVYDGYGYAI 146
NG ++ G Q F+ ++ +G G DG Y I
Sbjct: 128 YNGQMMPNGNQVFKLNWATSGAGEKRGD---DGSDYTI 162
>gi|115453831|ref|NP_001050516.1| Os03g0569900 [Oryza sativa Japonica Group]
gi|113548987|dbj|BAF12430.1| Os03g0569900, partial [Oryza sativa Japonica Group]
Length = 446
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/185 (54%), Positives = 123/185 (66%), Gaps = 26/185 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCSSRPMRIG A+ +K+ G QQQ S+ Y + QG S+ D +NTT+FV
Sbjct: 263 MTEMNGQYCSSRPMRIGPASNKKNIGGQQQPSAT--YQNT----QGTDSDSDPNNTTVFV 316
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDP+VTDE L+Q FS YGE+ VKIPVGK CGFVQ++NR +AEEA+ LNG+ +G QS
Sbjct: 317 GGLDPSVTDEVLKQAFSPYGELVYVKIPVGKRCGFVQYSNRASAEEAIRMLNGSQLGGQS 376
Query: 121 FRADYG------------NQWSGAYYG--GQVYDGYGYAIPPPNDPSMYAAAAAAYGAYP 166
R +G NQW+ YYG Q YD YGY + PP DP+MY AY AYP
Sbjct: 377 IRLSWGRSPGNKQPQQDQNQWNAGYYGYPPQGYDPYGY-VRPPQDPAMY-----AYAAYP 430
Query: 167 VYGSH 171
YG++
Sbjct: 431 GYGNY 435
Score = 42.0 bits (97), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFV 96
G G + D S+ TIFVG L +VTD L+ F + Y + K+ KG GFV
Sbjct: 192 GAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAHYQSVKGAKVVFDRSTGRSKGYGFV 251
Query: 97 QFANRENAEEALHKLNGTVIGKQSFR 122
+F + + A+ ++NG + R
Sbjct: 252 KFGDLDEQTRAMTEMNGQYCSSRPMR 277
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 11/98 (11%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + + L FSQ GE+ S KI K G GF++F + AE+ L
Sbjct: 112 TLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQVLQG 171
Query: 111 LNGTVI--GKQSFRADYGNQWSGAYYGGQVYDGYGYAI 146
NG ++ G Q F+ ++ +G G DG Y I
Sbjct: 172 YNGQMMPNGNQVFKLNWATSGAGEKRGD---DGSDYTI 206
>gi|10120421|gb|AAG13046.1|AC011807_5 Putative RNA binding protein [Arabidopsis thaliana]
Length = 468
Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 121/190 (63%), Gaps = 39/190 (20%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQG--------------------GYA-- 38
MTEMNG +CSSR MR+G ATP++++ Y QQ SQG G A
Sbjct: 272 MTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQGLITCLDALNIASEVNCNVFIGLALT 331
Query: 39 -SNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQ 97
+ G G G S+G+S+N+TIFVGGLD +VT+EDL QPFS +GE+ SVKIPVGKGCGFVQ
Sbjct: 332 LAGGHGGNGSMSDGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQ 391
Query: 98 FANRENAEEALHKLNGTVIGKQS------------FRADYGNQWSGAYYGGQVYDGYGYA 145
FANR++AEEA+ LNGTVIGK + +R+D GNQW+G Y GQ Y+ GYA
Sbjct: 392 FANRQSAEEAIGNLNGTVIGKNTVRLSWGRSPNKQWRSDSGNQWNGGYSRGQGYNN-GYA 450
Query: 146 IPPPNDPSMY 155
D +MY
Sbjct: 451 ---NQDSNMY 457
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T++VG L + + L FS E++SVK+ K G GFV+F +R AEEAL
Sbjct: 120 TLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQS 179
Query: 111 LNGTVI--GKQSFRADY 125
+G + +Q FR ++
Sbjct: 180 FSGVTMPNAEQPFRLNW 196
Score = 42.4 bits (98), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEA 107
+ +IFVG L P+V+D L + F+ +Y + K+ + KG GFV+F + A
Sbjct: 212 DLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRA 271
Query: 108 LHKLNGTVIGKQSFRADYGNQWSGAYYGGQ 137
+ ++NG + R A YG Q
Sbjct: 272 MTEMNGAFCSSRQMRVGIATPKRAAAYGQQ 301
>gi|168064363|ref|XP_001784132.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664332|gb|EDQ51056.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 453
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/204 (49%), Positives = 121/204 (59%), Gaps = 36/204 (17%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQ--------QYSSQGGYASNGAPGQGPQSEGD 52
M+EMNG+YCSSRPMRI AATP+KS G Q ++ Y + +P P ++ D
Sbjct: 195 MSEMNGIYCSSRPMRISAATPKKSLGPNQLNPKVSPVAVATYAAYGAQPSPQAFP-TDND 253
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
+NTTIFVGGLDP V DEDLR F Q+GE+ VKIP GKGCGFVQF +R AEEAL +L+
Sbjct: 254 PNNTTIFVGGLDPAVGDEDLRNVFGQFGELVYVKIPAGKGCGFVQFTHRACAEEALQRLH 313
Query: 113 GTVIGKQSFRADYG-------------------NQWSGA-YYGG--QVYDGYGYAIPPPN 150
TVIG Q+ R +G NQW+ A YY G Q YD YGY P P
Sbjct: 314 QTVIGTQAVRLSWGRSPGNKQTSDPAWGHHQDPNQWNAAGYYQGYAQGYDQYGYPAPAPQ 373
Query: 151 DPSMYAAAAAAYGAYPVYGSHQQQ 174
DP A A YG YP YG++ QQ
Sbjct: 374 DP-----AYAQYGNYPGYGNYPQQ 392
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFA 99
G Q + T++VG L + + L F GE+ SVKI K G GFV+F
Sbjct: 33 GMQPQHHEEVKTLWVGDLQYWMDENYLHTAFVHTGEVQSVKIIRNKQTGYSEGYGFVEFV 92
Query: 100 NRENAEEALHKLNGTVI--GKQSFRADYGN 127
+ AE+ L NGT + +Q FR ++ +
Sbjct: 93 SHVAAEKILQAYNGTQMPNTEQPFRLNWAS 122
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALH 109
+IFVG L P+VTD L++ F ++Y + K+ KG GFV+F + A+
Sbjct: 137 SIFVGDLAPDVTDYMLQETFRTRYPSVKGAKVVTDANTGRSKGYGFVRFGDEMERNRAMS 196
Query: 110 KLNGTVIGKQSFR 122
++NG + R
Sbjct: 197 EMNGIYCSSRPMR 209
>gi|168049769|ref|XP_001777334.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168061528|ref|XP_001782740.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665773|gb|EDQ52446.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671310|gb|EDQ57864.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 416
Score = 165 bits (417), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 102/207 (49%), Positives = 120/207 (57%), Gaps = 39/207 (18%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQ-----------QYSSQGGYASNGAPGQGPQS 49
M+EMNGVYCSSRPMRI AATP+KS G Q ++ Y + +P P
Sbjct: 160 MSEMNGVYCSSRPMRISAATPKKSLGPAQLNPKVDAVSPVAVATYAAYGAQPSPQAFP-V 218
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 109
+ D +NTTIFVGGLDP V DEDLR F Q+GE+ VKIP GKGCGFVQF +R AEEAL
Sbjct: 219 DNDPNNTTIFVGGLDPAVGDEDLRNVFGQFGELVYVKIPAGKGCGFVQFTHRACAEEALQ 278
Query: 110 KLNGTVIGKQSFRADYG-------------------NQW-SGAYYGG--QVYDGYGYAIP 147
+L+ TVIG Q+ R +G NQW +G YY G Q YD YGY
Sbjct: 279 RLHQTVIGTQAVRLSWGRSPGNKQTADPGWGQHQDPNQWNAGGYYQGYAQGYDQYGYPAQ 338
Query: 148 PPNDPSMYAAAAAAYGAYPVYGSHQQQ 174
PP DP A A YG YP YG++ QQ
Sbjct: 339 PPQDP-----AYAQYGNYPGYGNYPQQ 360
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 10/89 (11%)
Query: 47 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFAN 100
PQS + T++VG L + + L F GE+ SVKI K G GFV+F +
Sbjct: 1 PQSHEEVK--TLWVGDLQYWMDENYLHTAFVHTGEVQSVKIIRNKQTGYSEGYGFVEFVS 58
Query: 101 RENAEEALHKLNGTVI--GKQSFRADYGN 127
AE+ L NGT + +Q FR ++ +
Sbjct: 59 HAAAEKILQAYNGTQMPNTEQPFRLNWAS 87
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALH 109
+IFVG L P+VTD L++ F ++Y + K+ KG GFV+F + A+
Sbjct: 102 SIFVGDLAPDVTDYMLQETFRTRYPSVKGAKVVTDANTGRSKGYGFVRFGDEMERNRAMS 161
Query: 110 KLNGTVIGKQSFR 122
++NG + R
Sbjct: 162 EMNGVYCSSRPMR 174
>gi|357480263|ref|XP_003610417.1| RNA-binding protein [Medicago truncatula]
gi|355511472|gb|AES92614.1| RNA-binding protein [Medicago truncatula]
Length = 411
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 114/181 (62%), Gaps = 23/181 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEM GV CS+RPMRIG A+ + +Q AS P G Q+E D +NTTIFV
Sbjct: 226 MTEMQGVLCSTRPMRIGPAS-------NKNLGTQTSKASYQNPQGGAQNENDPNNTTIFV 278
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G LDPNVTDE L+Q F+QYGE+ VKIP GK CGFVQFA+R +AEEAL LNGT++G Q+
Sbjct: 279 GNLDPNVTDEHLKQVFTQYGELVHVKIPSGKRCGFVQFADRSSAEEALRVLNGTLLGGQN 338
Query: 121 FRADYG------------NQWSG--AYYGG--QVYDGYGYAIPPPNDPSMYAAAAAAYGA 164
R +G NQW+G +Y+GG Q Y+ Y YA P DP+MY + A Y +
Sbjct: 339 VRLSWGRSPANKQTQQDPNQWNGSSSYFGGYAQGYENYAYAPPAGQDPNMYGSYPAGYAS 398
Query: 165 Y 165
Y
Sbjct: 399 Y 399
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 13/107 (12%)
Query: 37 YASNGAPGQG----PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK- 91
+A N P Q P S D T +++G L + + L FS GE+ SVK+ K
Sbjct: 52 WAPNAQPPQQSAVPPPSSADEVKT-LWIGDLQYWMDENYLYNCFSHTGEVGSVKVIRNKQ 110
Query: 92 -----GCGFVQFANRENAEEALHKLNGTVI--GKQSFRADYGNQWSG 131
G GF++F +R AE L NGT++ G Q+FR ++ SG
Sbjct: 111 TNQSEGYGFLEFISRAGAERVLQTFNGTIMPNGGQNFRLNWATFSSG 157
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQF 98
G + DS + TIFVG L +V+D L + F ++Y + K+ + KG GFV+F
Sbjct: 157 GEKRHDDSPDYTIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRTTGRTKGYGFVRF 216
Query: 99 ANRENAEEALHKLNGTVIGKQSFR 122
A+ A+ ++ G + + R
Sbjct: 217 ADESEQMRAMTEMQGVLCSTRPMR 240
>gi|388507756|gb|AFK41944.1| unknown [Medicago truncatula]
Length = 411
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 114/181 (62%), Gaps = 23/181 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEM GV CS+RPMRIG A+ + +Q AS P G Q+E D +NTTIFV
Sbjct: 226 MTEMQGVLCSTRPMRIGPAS-------NKNLGTQTSKASYQNPQGGAQNENDPNNTTIFV 278
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G LDPNVTDE L+Q F+QYGE+ VKIP GK CGFVQFA+R +AEEAL LNGT++G Q+
Sbjct: 279 GNLDPNVTDEHLKQVFTQYGELVHVKIPSGKRCGFVQFADRSSAEEALRVLNGTLLGGQN 338
Query: 121 FRADYG------------NQWSG--AYYGG--QVYDGYGYAIPPPNDPSMYAAAAAAYGA 164
R +G NQW+G +Y+GG Q Y+ Y YA P DP+MY + A Y +
Sbjct: 339 VRLSWGRSPANKQTQQDPNQWNGSSSYFGGYAQGYENYAYAPPAGQDPNMYGSYPAGYAS 398
Query: 165 Y 165
Y
Sbjct: 399 Y 399
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 13/107 (12%)
Query: 37 YASNGAPGQG----PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK- 91
+A N P Q P S D T +++G L + + L FS GE+ SVK+ K
Sbjct: 52 WAPNAQPPQQSAVPPPSSADEVET-LWIGDLQYWMDENYLYNCFSHTGEVGSVKVIRNKQ 110
Query: 92 -----GCGFVQFANRENAEEALHKLNGTVI--GKQSFRADYGNQWSG 131
G GF++F +R AE L NGT++ G Q+FR ++ SG
Sbjct: 111 TNQSEGYGFLEFISRAGAERVLQTFNGTIMPNGGQNFRLNWATFSSG 157
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQF 98
G + DS + TIFVG L +V+D L + F ++Y + K+ + KG GFV+F
Sbjct: 157 GEKRHDDSPDYTIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRTTGRTKGYGFVRF 216
Query: 99 ANRENAEEALHKLNGTVIGKQSFR 122
A+ A+ ++ G + + R
Sbjct: 217 ADESEQMRAMTEMQGVLCSTRPMR 240
>gi|365192966|gb|AEW68341.1| putative nuclear acid binding protein [Medicago sativa]
Length = 409
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 114/181 (62%), Gaps = 23/181 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEM GV CS+RPMRIG A+ + +Q AS P G Q+E D +NTTIFV
Sbjct: 224 MTEMQGVLCSTRPMRIGPAS-------NKNLGTQTSKASYQNPQGGAQNENDPNNTTIFV 276
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G LDPNVTDE L+Q F+QYGE+ VKIP GK CGFVQFA+R +AEEAL LNGT++G Q+
Sbjct: 277 GNLDPNVTDEHLKQVFTQYGELVHVKIPSGKRCGFVQFADRSSAEEALRVLNGTLLGGQN 336
Query: 121 FRADYG------------NQWSGA--YYGG--QVYDGYGYAIPPPNDPSMYAAAAAAYGA 164
R +G NQW+G+ Y+GG Q Y+ Y YA P DP+MY + A Y +
Sbjct: 337 VRLSWGRSPANKQTQQDPNQWNGSSGYFGGYAQGYENYAYAPPAGQDPNMYGSYPAGYAS 396
Query: 165 Y 165
Y
Sbjct: 397 Y 397
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + + L FS GE+ SVK+ K G GF++F +R AE L
Sbjct: 73 TLWIGDLQYWMDENYLYNCFSHTGEVGSVKVIRNKLNNQSEGYGFLEFISRAGAERVLQT 132
Query: 111 LNGTVI--GKQSFRADYGNQWSG 131
NGT++ G Q+FR ++ SG
Sbjct: 133 YNGTIMPNGGQNFRLNWATFSSG 155
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQF 98
G + DS + TIFVG L +V+D L + F ++Y + K+ + KG GFV+F
Sbjct: 155 GEKRHDDSPDYTIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRNTGRSKGYGFVRF 214
Query: 99 ANRENAEEALHKLNGTVIGKQSFR 122
A+ A+ ++ G + + R
Sbjct: 215 ADESEQMRAMTEMQGVLCSTRPMR 238
>gi|225461001|ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Vitis vinifera]
Length = 417
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/186 (55%), Positives = 118/186 (63%), Gaps = 26/186 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M EMNG++CS+RPMRIG A +K G QQ Q N QG Q E D +NTTIFV
Sbjct: 242 MNEMNGMFCSTRPMRIGPAATKKPVGGQQ---FQKASFQNT---QGNQGESDPNNTTIFV 295
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLD NVTD+ LRQ FSQYGE+ VKIPVGK CGFVQFANR AE+AL LNGT +G QS
Sbjct: 296 GGLDSNVTDDYLRQVFSQYGELVHVKIPVGKRCGFVQFANRACAEQALAGLNGTQLGAQS 355
Query: 121 FRADYGN------------QWS-GAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 167
R +G QW+ G Y Q Y+ YGYA PPP DP+MY YGAYP
Sbjct: 356 IRLSWGRSPSNKQAQPDQAQWNGGYYGYAQGYEAYGYA-PPPQDPNMY------YGAYPG 408
Query: 168 YGSHQQ 173
YG++QQ
Sbjct: 409 YGNYQQ 414
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 8/128 (6%)
Query: 47 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFAN 100
PQ+ ++++G L P + + L FSQ GE+ SVK+ K G GF++ A
Sbjct: 81 PQASNPEEIRSLWIGDLQPWMEENYLWGCFSQTGEVVSVKVIRNKQTGQCEGYGFIELAT 140
Query: 101 RENAEEALHKLNGTVI--GKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAA 158
R AE L NGT++ +Q+FR ++ +G D + +D + Y
Sbjct: 141 RAAAERILQTYNGTLMPNSEQNFRLNWATLGAGERRADDTPDYTIFVGDLASDVTDYVLQ 200
Query: 159 AAAYGAYP 166
G YP
Sbjct: 201 ETFRGHYP 208
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFV 96
G G + D+ + TIFVG L +VTD L++ F Y + K+ KG GFV
Sbjct: 171 GAGERRADDTPDYTIFVGDLASDVTDYVLQETFRGHYPSVKGAKVVTDRTTGRSKGYGFV 230
Query: 97 QFANRENAEEALHKLNGTVIGKQSFR 122
+F + A++++NG + R
Sbjct: 231 RFGDEGEQLRAMNEMNGMFCSTRPMR 256
>gi|357163840|ref|XP_003579863.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 428
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/189 (53%), Positives = 131/189 (69%), Gaps = 29/189 (15%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCS+RP+RIG ATPR+++G + + PG S+GDS+N T++V
Sbjct: 256 MTEMNGVYCSTRPIRIGPATPRRTAGD----------SGSSTPGH---SDGDSTNRTVYV 302
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV++++LR+ F++YG++ASVKIP GK CGFVQ+ NR +AEEAL LNG+VIGKQ+
Sbjct: 303 GGLDPNVSEDELRKSFAKYGDVASVKIPQGKQCGFVQYVNRTDAEEALQGLNGSVIGKQA 362
Query: 121 FRA-------------DYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 167
R D GN+ + YYG Y GYGYA P P+ P+M AAAAAYGAYP
Sbjct: 363 VRLSWGRSPSHKQPRGDSGNRRNNMYYGTPFYGGYGYASPVPH-PNM-YAAAAAYGAYPF 420
Query: 168 YGSHQQQVS 176
YG +QQ VS
Sbjct: 421 YG-NQQLVS 428
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEE 106
S+ +IFVG L +VTDE L + F S+Y + K+ + +G GFV+F +
Sbjct: 195 SDHSIFVGDLAADVTDEMLMELFASKYRSVKGAKVIIDANTGRSRGYGFVRFGEDSDKSR 254
Query: 107 ALHKLNGTVIGKQSFR 122
A+ ++NG + R
Sbjct: 255 AMTEMNGVYCSTRPIR 270
>gi|297791731|ref|XP_002863750.1| hypothetical protein ARALYDRAFT_331131 [Arabidopsis lyrata subsp.
lyrata]
gi|297309585|gb|EFH40009.1| hypothetical protein ARALYDRAFT_331131 [Arabidopsis lyrata subsp.
lyrata]
Length = 400
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/187 (54%), Positives = 113/187 (60%), Gaps = 45/187 (24%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M EMNGV C R MRIG ATPRK SGY QQ
Sbjct: 243 MLEMNGVKCCGRAMRIGPATPRKPSGYHQQ------------------------------ 272
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GLD +VTD+DLRQPF+ YGEI SVKIPVGKGCGF+QF NRENAEEAL KLNG++IGKQ+
Sbjct: 273 -GLDSSVTDDDLRQPFAGYGEIVSVKIPVGKGCGFIQFVNRENAEEALEKLNGSMIGKQT 331
Query: 121 FRA-------------DYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 167
R +Y +QW YYGGQ Y+GYGY +PPP DP MYAAA G YPV
Sbjct: 332 VRLSWGRNPGNKQPRGEYADQWVEPYYGGQYYNGYGYMMPPPVDPRMYAAAPYG-GGYPV 390
Query: 168 YGSHQQQ 174
Y HQQQ
Sbjct: 391 YSGHQQQ 397
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 8/86 (9%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANR 101
Q+ ++ N TI+VG L + + L FS GEI+SVK+ K G GFV+F +
Sbjct: 83 QNASNTENKTIWVGDLLHWMDENYLNSSFSSAGEISSVKVIRNKHTGLTEGYGFVEFVSH 142
Query: 102 ENAEEALHKLNGTVI--GKQSFRADY 125
+ AE+ L +LNG + +Q FR ++
Sbjct: 143 DVAEKVLQELNGEAMLNAEQPFRLNW 168
Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 7/75 (9%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQFANRENAEEA 107
+ +IFVG L P VTD L Q FS+ Y + + K+ + KG GFV+F + +A
Sbjct: 183 DLSIFVGDLAPEVTDTMLEQIFSEKYPSVKNAKVVIDGNTGRSKGYGFVRFGDDSERSKA 242
Query: 108 LHKLNGTVIGKQSFR 122
+ ++NG ++ R
Sbjct: 243 MLEMNGVKCCGRAMR 257
>gi|194703366|gb|ACF85767.1| unknown [Zea mays]
Length = 420
Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 99/189 (52%), Positives = 128/189 (67%), Gaps = 32/189 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M+EMNGVYCS+RP+RIG ATPR+SSG + PG S+GDSSN T++V
Sbjct: 251 MSEMNGVYCSTRPIRIGPATPRRSSGDSGSST----------PGH---SDGDSSNRTVYV 297
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV++++LR+ F++Y ++ASVKIP+GK CGFVQF +R +AEEAL LNG++IGKQ+
Sbjct: 298 GGLDPNVSEDELRKAFAKY-DLASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSLIGKQA 356
Query: 121 FRA-------------DYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 167
R D N+ + YYG Y GYGYA P P+ P+MY AAAYG YP+
Sbjct: 357 VRLSWVRSPSHKQSRGDSVNRRNNMYYGTPFYGGYGYASPVPH-PNMY---AAAYGTYPL 412
Query: 168 YGSHQQQVS 176
YG +QQ VS
Sbjct: 413 YG-NQQLVS 420
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +VTDE L + F S+Y + K+ + +G GFV+F + +
Sbjct: 189 ASDHSIFVGDLAADVTDEMLLELFSSKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKS 248
Query: 106 EALHKLNGTVIGKQSFR 122
A+ ++NG + R
Sbjct: 249 HAMSEMNGVYCSTRPIR 265
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFV 96
P G G N TI+VG L + + L F GE+ ++K+ + G GFV
Sbjct: 86 PSSGSGGNGCEENKTIWVGDLQYWMDENYLHNCFGPSGEVVTIKVIRNRQTGQSEGYGFV 145
Query: 97 QFANRENAEEALHKLNGTVI 116
+F + +AE+AL G V+
Sbjct: 146 EFFSHASAEKALQNFTGHVM 165
>gi|226495169|ref|NP_001150649.1| nucleic acid binding protein [Zea mays]
gi|195640856|gb|ACG39896.1| nucleic acid binding protein [Zea mays]
Length = 420
Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 99/189 (52%), Positives = 128/189 (67%), Gaps = 32/189 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M+EMNGVYCS+RP+RIG ATPR+SSG + PG S+GDSSN T++V
Sbjct: 251 MSEMNGVYCSTRPIRIGPATPRRSSGDSGSST----------PGH---SDGDSSNRTVYV 297
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV++++LR+ F++Y ++ASVKIP+GK CGFVQF +R +AEEAL LNG++IGKQ+
Sbjct: 298 GGLDPNVSEDELRKAFAKY-DLASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSLIGKQA 356
Query: 121 FRA-------------DYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 167
R D N+ + YYG Y GYGYA P P+ P+MY AAAYG YP+
Sbjct: 357 VRLSWVRSPSHKQSRGDSVNRRNNMYYGTPFYGGYGYASPVPH-PNMY---AAAYGTYPL 412
Query: 168 YGSHQQQVS 176
YG +QQ VS
Sbjct: 413 YG-NQQLVS 420
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +VTDE L + F S+Y + K+ + +G GFV+F + +
Sbjct: 189 ASDHSIFVGDLAADVTDEMLLELFSSKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKS 248
Query: 106 EALHKLNGTVIGKQSFR 122
A+ ++NG + R
Sbjct: 249 HAMSEMNGVYCSTRPIR 265
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFV 96
P G G N TI+VG L + + L F GE+ ++K+ + G GFV
Sbjct: 86 PSSGSGGNGCEENKTIWVGDLQYWMDENYLHNCFGPSGEVVTIKVIRNRQTGQSEGYGFV 145
Query: 97 QFANRENAEEALHKLNGTVI 116
+F + +AE+AL G V+
Sbjct: 146 EFFSHASAEKALQNFTGHVM 165
>gi|195620484|gb|ACG32072.1| nucleic acid binding protein [Zea mays]
gi|195625400|gb|ACG34530.1| nucleic acid binding protein [Zea mays]
Length = 369
Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 99/189 (52%), Positives = 128/189 (67%), Gaps = 32/189 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M+EMNGVYCS+RP+RIG ATPR+SSG + PG S+GDSSN T++V
Sbjct: 200 MSEMNGVYCSTRPIRIGPATPRRSSGDSGSST----------PGH---SDGDSSNRTVYV 246
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV++++LR+ F++Y ++ASVKIP+GK CGFVQF +R +AEEAL LNG++IGKQ+
Sbjct: 247 GGLDPNVSEDELRKAFAKY-DLASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSLIGKQA 305
Query: 121 FRA-------------DYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 167
R D N+ + YYG Y GYGYA P P+ P+MY AAAYG YP+
Sbjct: 306 VRLSWVRSPSHKQSRGDSVNRRNNMYYGTPFYGGYGYASPVPH-PNMY---AAAYGTYPL 361
Query: 168 YGSHQQQVS 176
YG +QQ VS
Sbjct: 362 YG-NQQLVS 369
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +VTDE L + F S+Y + K+ + +G GFV+F + +
Sbjct: 138 ASDHSIFVGDLAADVTDEMLLELFSSKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKS 197
Query: 106 EALHKLNGTVIGKQSFR 122
A+ ++NG + R
Sbjct: 198 HAMSEMNGVYCSTRPIR 214
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFV 96
P G G N TI+VG L + + L F GE+ ++K+ + G GFV
Sbjct: 35 PSSGSGGNGCEENKTIWVGDLQYWMDENYLHNCFGPSGEVVTIKVIRNRQTGQSEGYGFV 94
Query: 97 QFANRENAEEALHKLNGTVI 116
+F + +AE+AL G V+
Sbjct: 95 EFFSHASAEKALQNFTGHVM 114
>gi|147859325|emb|CAN83958.1| hypothetical protein VITISV_039907 [Vitis vinifera]
Length = 410
Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 100/186 (53%), Positives = 116/186 (62%), Gaps = 32/186 (17%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M EMNG++CS+RPMRIG A +K G Q + QG Q E D +NTTIFV
Sbjct: 227 MNEMNGMFCSTRPMRIGPAATKKPVGASFQNT------------QGXQGESDPNNTTIFV 274
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLD NVTD+ LRQ FSQYGE+ VKIPVGK CGFVQFANR AE+AL LNGT +G QS
Sbjct: 275 GGLDSNVTDDYLRQVFSQYGELVHVKIPVGKRCGFVQFANRACAEQALAGLNGTQLGAQS 334
Query: 121 FRADYGN------------QWS-GAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 167
R +G QW+ G Y Q Y+ YGYA PPP DP+MY YGAYP
Sbjct: 335 IRLSWGRSPSNKQAQPDQAQWNGGYYGYAQGYEAYGYA-PPPQDPNMY------YGAYPG 387
Query: 168 YGSHQQ 173
YG++QQ
Sbjct: 388 YGNYQQ 393
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 8/128 (6%)
Query: 47 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFAN 100
PQ+ ++++G L P + + FSQ GE+ SVK+ K G GF++ A
Sbjct: 66 PQASNPEEIRSLWIGDLQPWMEENYXWGCFSQTGEVVSVKVIRNKQTGQCEGYGFIELAT 125
Query: 101 RENAEEALHKLNGTVI--GKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAA 158
R AE L NGT++ +Q+FR ++ +G D + +D + Y
Sbjct: 126 RAAAERILQTYNGTLMPNSEQNFRLNWATLGAGERRADDTPDYTIFVGDLASDVTDYVLQ 185
Query: 159 AAAYGAYP 166
G YP
Sbjct: 186 ETFRGHYP 193
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFV 96
G G + D+ + TIFVG L +VTD L++ F Y + K+ KG GFV
Sbjct: 156 GAGERRADDTPDYTIFVGDLASDVTDYVLQETFRGHYPSVKGAKVVTDRTTGRSKGYGFV 215
Query: 97 QFANRENAEEALHKLNGTVIGKQSFR 122
+F + A++++NG + R
Sbjct: 216 RFGDEGEQLRAMNEMNGMFCSTRPMR 241
>gi|326528543|dbj|BAJ93453.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 416
Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 94/189 (49%), Positives = 116/189 (61%), Gaps = 29/189 (15%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQY-SSQGGYASNG---APGQGPQSEGDSSNT 56
M+EMNGVYCS+RPMRI AA P+KSSG Q QY +++ Y + Q + D +NT
Sbjct: 169 MSEMNGVYCSTRPMRISAAIPKKSSGSQLQYGAAKAMYPATAYAIPQAQTVLPDSDLTNT 228
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
TIF+G LDPNVT+E+LRQ Q+GE+ VKIPVGKGCGFVQ+A+R +AEEA+ +L+GTVI
Sbjct: 229 TIFIGNLDPNVTEEELRQICVQFGELIYVKIPVGKGCGFVQYASRASAEEAVQRLHGTVI 288
Query: 117 GKQSFRADYG-------------------NQWSGAYYGGQVYDGYGYAIPPPNDPSMYAA 157
G+Q R +G NQWS Y G YD YGY P DPS
Sbjct: 289 GQQVVRLSWGRSPANKQDQSAAWGQQADPNQWSAYYSYG--YDPYGY----PQDPSYAYG 342
Query: 158 AAAAYGAYP 166
A A Y YP
Sbjct: 343 AYAGYAQYP 351
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEA 107
+ +IFVG L P+VTD L++ F Y + K+ KG GFV+FA+ A
Sbjct: 109 DHSIFVGDLAPDVTDYLLQETFRVNYSSVRGAKVVTDPNTGRSKGYGFVKFADENEKTRA 168
Query: 108 LHKLNGTVIGKQSFR 122
+ ++NG + R
Sbjct: 169 MSEMNGVYCSTRPMR 183
>gi|222623094|gb|EEE57226.1| hypothetical protein OsJ_07197 [Oryza sativa Japonica Group]
Length = 459
Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/176 (50%), Positives = 114/176 (64%), Gaps = 23/176 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK-----SSGY----QQQYSSQGGYASNGAPGQGPQSEG 51
MTEMNG YCS+RP+RIG ATPR +S Y + + + G Y + QS+
Sbjct: 267 MTEMNGAYCSTRPIRIGPATPRDLQPTSASAYGLVAKARANIWGEYVGDSGSSPPRQSDS 326
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
DS+N TI+VGGLDPN T+++LR+ F++YG++ASVKIPVGK CGFVQF NR +AEEAL L
Sbjct: 327 DSTNRTIYVGGLDPNATEDELRKAFAKYGDLASVKIPVGKQCGFVQFVNRPDAEEALQGL 386
Query: 112 NGTVIGKQSFRA-------------DYGNQWSGAYYGGQVYDGYGYAIPPPNDPSM 154
NG+ IGKQ+ R D G++ +G YYG Y GYGYA P P+ P+M
Sbjct: 387 NGSTIGKQAVRLSWGRSPASKQSRGDSGHRRNGMYYGTPFYGGYGYASPLPH-PNM 441
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +VTDE L F+ +Y + K+ + +G GFV+F + +
Sbjct: 205 ASDHSIFVGDLAVDVTDEMLMDLFAKKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKT 264
Query: 106 EALHKLNGTVIGKQSFR 122
A+ ++NG + R
Sbjct: 265 HAMTEMNGAYCSTRPIR 281
>gi|413922759|gb|AFW62691.1| hypothetical protein ZEAMMB73_026342 [Zea mays]
Length = 430
Score = 158 bits (400), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 86/171 (50%), Positives = 111/171 (64%), Gaps = 31/171 (18%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCS+RP+R+G ATPR+S G S +P + QS DS+N T++V
Sbjct: 256 MTEMNGVYCSTRPIRVGPATPRRSQG-----------DSGTSPPR--QSHVDSTNRTVYV 302
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV++++LR+ F++YG++ASVKIP GK CGFVQF NR +AEEALH LNG+ IGKQ+
Sbjct: 303 GGLDPNVSEDELRKAFAKYGDLASVKIPFGKQCGFVQFVNRVDAEEALHGLNGSTIGKQA 362
Query: 121 FRADYGN-----------------QWSGAYYGGQVYDGYGYAIPPPNDPSM 154
R +G +G YYG Y GYGYA P P+ P+M
Sbjct: 363 VRLSWGRSPASKQSRGDSGHRRNGNCNGMYYGTPFYGGYGYASPIPH-PNM 412
Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 105
SS+ +IFVG L +VTD L + FS +Y + K+ + +G GFV+F + +
Sbjct: 194 SSDHSIFVGDLAVDVTDAMLLELFSNKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKI 253
Query: 106 EALHKLNGTVIGKQSFRA 123
A+ ++NG + R
Sbjct: 254 HAMTEMNGVYCSTRPIRV 271
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENA 104
G N TI+VG L + + L F GE+ ++K+ V +G GF++F +A
Sbjct: 99 GGEDNRTIWVGDLQYWMDENYLHSCFGSSGEVVNIKVIRNRHSGVSEGYGFIEFYTHVSA 158
Query: 105 EEALHKLNGTVI 116
E+AL +G V+
Sbjct: 159 EKALQNFSGHVM 170
>gi|449513289|ref|XP_004164285.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
RBP47B'-like [Cucumis sativus]
Length = 427
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/202 (46%), Positives = 120/202 (59%), Gaps = 35/202 (17%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQ------QQYSSQGGYASNGAPGQGPQ--SEGD 52
M+EMNG YCS+RPMRI AATP+K + + +++ Y P ++ D
Sbjct: 172 MSEMNGXYCSTRPMRISAATPKKPLVFSSNTVXVKVMNNESMYPVPAYTTSVPVLPADYD 231
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
++NTTIFVG LDPN+T+E+L+Q F Q+GEIA VKIP GKGCGFVQF R +AEEA+ K+
Sbjct: 232 ANNTTIFVGNLDPNITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQ 291
Query: 113 GTVIGKQSFRADYG------------------NQWSGAYYG-GQVYDGYGYAIPPPNDPS 153
G +IG+Q R +G NQWS AYYG G YD YGY + DPS
Sbjct: 292 GKIIGQQVVRTSWGRNPAAKQDLTTWGQQVDPNQWS-AYYGYGGTYDAYGYGV--VQDPS 348
Query: 154 MYAAAAAAYGAYPVYGSHQQQV 175
+Y YGAY Y S+ QQV
Sbjct: 349 LY-----GYGAYSGYASYPQQV 365
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALH 109
+IFVG L P+VTD L++ F +QY + K+ KG GFV+FA+ A+
Sbjct: 114 SIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMS 173
Query: 110 KLNGTVIGKQSFR 122
++NG + R
Sbjct: 174 EMNGXYCSTRPMR 186
Score = 42.7 bits (99), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L V + L F+ GE+ S+KI K G GFV+F + AE L
Sbjct: 21 TLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQT 80
Query: 111 LNGTVI--GKQSFRADYGN 127
NGT + +Q+FR ++ +
Sbjct: 81 YNGTQMPGTEQTFRLNWAS 99
>gi|302784144|ref|XP_002973844.1| hypothetical protein SELMODRAFT_100454 [Selaginella moellendorffii]
gi|302803590|ref|XP_002983548.1| hypothetical protein SELMODRAFT_118305 [Selaginella moellendorffii]
gi|300148791|gb|EFJ15449.1| hypothetical protein SELMODRAFT_118305 [Selaginella moellendorffii]
gi|300158176|gb|EFJ24799.1| hypothetical protein SELMODRAFT_100454 [Selaginella moellendorffii]
Length = 350
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 115/190 (60%), Gaps = 26/190 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEM GVYCS+RPMRI ATP+KS G+ + G P P ++ D SNTT+FV
Sbjct: 173 MTEMAGVYCSTRPMRISTATPKKSLAT----IPPKGFQNFGVP---PLTDNDPSNTTVFV 225
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLD +V DEDL+Q FSQ+G+I VKIP GK CGFVQF R +AEEAL KL+G+ IG+Q+
Sbjct: 226 GGLDHSVKDEDLKQVFSQFGDIQYVKIPAGKNCGFVQFYTRASAEEALQKLHGSTIGQQT 285
Query: 121 FRADYG-------------NQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYP- 166
R +G NQW+G YYG PPP DP Y AYG +P
Sbjct: 286 IRLSWGRSPANKQQVQPEFNQWNGPYYGYGQGYECYGFAPPPQDPGAY-----AYGNFPQ 340
Query: 167 VYGSHQQQVS 176
YG++ QQVS
Sbjct: 341 AYGTYPQQVS 350
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGF 95
P QGP + +IFVG L P+VTD L++ F S+Y + K+ + KG GF
Sbjct: 108 PDQGP-------DFSIFVGDLAPDVTDYMLQETFQSRYSSVKGAKVVMDTTTARSKGYGF 160
Query: 96 VQFANRENAEEALHKLNGTVIGKQSFR 122
V+F + A+ ++ G + R
Sbjct: 161 VRFGDEAEKMRAMTEMAGVYCSTRPMR 187
>gi|242062048|ref|XP_002452313.1| hypothetical protein SORBIDRAFT_04g023540 [Sorghum bicolor]
gi|241932144|gb|EES05289.1| hypothetical protein SORBIDRAFT_04g023540 [Sorghum bicolor]
Length = 435
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/171 (49%), Positives = 110/171 (64%), Gaps = 31/171 (18%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCS+RP+R+G ATPR+S G S +P + QS+ DS+N T++V
Sbjct: 261 MTEMNGVYCSTRPIRVGPATPRRSQG-----------DSGSSPPR--QSDVDSTNRTVYV 307
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV++++LR+ F++YG++ASVKIP GK CGFVQF NR +AEEAL LNG IGKQ+
Sbjct: 308 GGLDPNVSEDELRKAFAKYGDLASVKIPFGKQCGFVQFVNRADAEEALQGLNGATIGKQA 367
Query: 121 FRADYGN-----------------QWSGAYYGGQVYDGYGYAIPPPNDPSM 154
R +G +G YYG Y GYGYA P P+ P+M
Sbjct: 368 VRLSWGRSPASKQSRGDSGHRRNGNGNGMYYGTPFYSGYGYASPVPH-PNM 417
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 105
SS+ +IFVG L +VTDE L + FS +Y + K+ + +G GFV+F + +
Sbjct: 199 SSDHSIFVGDLAVDVTDEMLLELFSNKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKT 258
Query: 106 EALHKLNGTVIGKQSFRA 123
A+ ++NG + R
Sbjct: 259 HAMTEMNGVYCSTRPIRV 276
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEAL 108
N TI+VG L + + L F GE+ ++K+ V +G GFV+F + +AE+AL
Sbjct: 108 NRTIWVGDLQYWMDENYLHSCFGPSGEVVNIKVIRNRHSGVSEGYGFVEFYSHVSAEKAL 167
Query: 109 HKLNGTVI 116
+G V+
Sbjct: 168 QNFSGHVM 175
>gi|242033859|ref|XP_002464324.1| hypothetical protein SORBIDRAFT_01g016170 [Sorghum bicolor]
gi|241918178|gb|EER91322.1| hypothetical protein SORBIDRAFT_01g016170 [Sorghum bicolor]
Length = 409
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/185 (53%), Positives = 121/185 (65%), Gaps = 25/185 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCSSRPMR+G A+ +K++G Q Q SS Y + QG S+ D +NTT+FV
Sbjct: 224 MTEMNGQYCSSRPMRLGPASNKKNTGGQPQPSSTI-YQNT----QGTDSDSDPNNTTVFV 278
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDP+VTDE L+Q FS YGE+ VKIPVGK CGFVQ++NR +AEEA+ LNG+ +G QS
Sbjct: 279 GGLDPSVTDELLKQTFSPYGELLYVKIPVGKRCGFVQYSNRASAEEAIRMLNGSQLGGQS 338
Query: 121 FRADYG------------NQWS--GAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYP 166
R +G NQWS G Y Q YD YGYA PP DP+MY AY YP
Sbjct: 339 IRLSWGRSPANKQPQQEQNQWSGGGYYGYPQGYDPYGYAR-PPQDPAMY-----AYTPYP 392
Query: 167 VYGSH 171
YG++
Sbjct: 393 GYGNY 397
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 10/93 (10%)
Query: 37 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------ 89
+A++GA G + D S+ TIFVG L +VTD L+ F S+Y + S K+
Sbjct: 149 WATSGA---GEKRGDDGSDYTIFVGDLASDVTDFILQDTFKSRYPSVKSAKVVFDRTTGR 205
Query: 90 GKGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
KG GFV+FA+ + A+ ++NG + R
Sbjct: 206 SKGYGFVKFADLDEQTRAMTEMNGQYCSSRPMR 238
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 11/98 (11%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + + L FSQ GE+ SVKI K G GF++F N AE+ L
Sbjct: 73 TLWIGDLQYWMDENYLYSCFSQAGEVISVKIIRNKQTGQPEGYGFIEFGNHALAEQVLQN 132
Query: 111 LNGTVIG--KQSFRADYGNQWSGAYYGGQVYDGYGYAI 146
NG ++ Q F+ ++ +G G DG Y I
Sbjct: 133 YNGQMMPNVNQPFKLNWATSGAGEKRGD---DGSDYTI 167
>gi|255554923|ref|XP_002518499.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223542344|gb|EEF43886.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 430
Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/184 (50%), Positives = 117/184 (63%), Gaps = 25/184 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MT+MNG +CS+RPMRIG AT K++ QQY + Y ++ G+ +E D +NTTIFV
Sbjct: 240 MTDMNGAFCSTRPMRIGLAT-NKNAVTGQQYP-KASYQNSQTQGE---NENDPNNTTIFV 294
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G LD NVTD++LR+ F +YG++ VKIP GK CGFVQFA+R AEEAL LNGT + QS
Sbjct: 295 GNLDSNVTDDNLRELFGRYGQLLHVKIPAGKRCGFVQFADRSCAEEALRLLNGTSLSGQS 354
Query: 121 FRADYG------------NQWSGAYYG-GQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 167
R +G NQW+ YYG Q Y+ YGYA P P DP+MY YG YP
Sbjct: 355 IRLSWGRSPSNKQPQPDANQWNAGYYGYAQGYENYGYA-PAPQDPNMY------YGNYPG 407
Query: 168 YGSH 171
YG++
Sbjct: 408 YGNY 411
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + + + F+ GE+ SVK+ K G GF++F + AE L
Sbjct: 90 TLWIGDLQYWMDENYINSCFAHTGEVTSVKVIRNKQTGQVEGYGFIEFGSHGTAERILQT 149
Query: 111 LNGTVI--GKQSFRADY 125
NGT + G+Q+FR ++
Sbjct: 150 YNGTPMPNGEQNFRLNW 166
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 7/93 (7%)
Query: 37 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPVG----- 90
+ N A G D+ + TIFVG L +VTD L+ F Y + K+ +
Sbjct: 162 FRLNWASFSGGDKRDDTPDFTIFVGDLAADVTDYILQDTFRVHYPSVKGAKVVIDRLTGR 221
Query: 91 -KGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
KG GFV+F + A+ +NG + R
Sbjct: 222 TKGYGFVRFGDESEQVRAMTDMNGAFCSTRPMR 254
>gi|212275334|ref|NP_001130489.1| uncharacterized protein LOC100191587 [Zea mays]
gi|194689276|gb|ACF78722.1| unknown [Zea mays]
Length = 417
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/162 (51%), Positives = 109/162 (67%), Gaps = 28/162 (17%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCS+RP+R+G ATPR+S G S +P + QS+ DS+N T++V
Sbjct: 245 MTEMNGVYCSTRPIRVGLATPRRSQG-----------DSGSSPPR--QSDVDSTNRTVYV 291
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV++++LR+ F++YG++ASVKIP GK CGFVQF NR +AEEAL LNG+ IGKQ+
Sbjct: 292 GGLDPNVSEDELRKAFAKYGDLASVKIPFGKQCGFVQFVNRVDAEEALQGLNGSTIGKQA 351
Query: 121 FRA-------------DYGNQW--SGAYYGGQVYDGYGYAIP 147
R DYG++ +G YYG Y GYGYA P
Sbjct: 352 IRLSWGRSPTSKQSRGDYGHRRNGNGMYYGTPFYGGYGYASP 393
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEA 107
+ +IFVG L +VTDE L + FS +Y + K+ + +G GFV+F + + A
Sbjct: 185 DHSIFVGDLAVDVTDEMLLELFSNKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKTLA 244
Query: 108 LHKLNGTVIGKQSFRA 123
+ ++NG + R
Sbjct: 245 MTEMNGVYCSTRPIRV 260
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHK 110
TI+VG L + + L F GE+ ++K+ V +G GFV+F + +AE+AL
Sbjct: 94 TIWVGDLQYWMDENYLHSCFGPGGEVVNIKVIRNRHSGVSEGYGFVEFYSHVSAEKALQN 153
Query: 111 LNGTVI--GKQSFRADY 125
+G V+ +++F+ ++
Sbjct: 154 FSGHVMPNTERAFKLNW 170
>gi|212722984|ref|NP_001132004.1| uncharacterized protein LOC100193409 [Zea mays]
gi|194693170|gb|ACF80669.1| unknown [Zea mays]
Length = 422
Score = 155 bits (391), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 82/127 (64%), Positives = 94/127 (74%), Gaps = 11/127 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSRPMRIG ATPRKSSG S +G GD +NTT+FV
Sbjct: 244 MTEMNGVYCSSRPMRIGPATPRKSSGTSGSNGSSA--RPDG---------GDLTNTTVFV 292
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDP+V++EDLRQ FSQYGEI+SVKIPVGK CGFVQFA R+NAE+AL LNG+ IGKQ+
Sbjct: 293 GGLDPDVSEEDLRQAFSQYGEISSVKIPVGKQCGFVQFAQRKNAEDALQGLNGSTIGKQA 352
Query: 121 FRADYGN 127
R +G
Sbjct: 353 VRLSWGR 359
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFA 99
P G N TI+VG L + + L F GE+ ++K+ K G GFV+F
Sbjct: 82 APHQAGQEENKTIWVGDLHFWMDENYLHNCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFY 141
Query: 100 NRENAEEALHKLNGTVI--GKQSFRADYGN 127
+ AE L +G ++ Q FR ++ +
Sbjct: 142 SHAAAERVLEGFSGHIMPNTDQPFRLNWAS 171
Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +V D L + FS +Y + K+ + KG GFV+F +
Sbjct: 182 ASDHSIFVGDLASDVNDATLLEVFSSRYSSVKGAKVVIDANTGRSKGYGFVRFGDDSEKT 241
Query: 106 EALHKLNGTVIGKQSFR 122
A+ ++NG + R
Sbjct: 242 HAMTEMNGVYCSSRPMR 258
>gi|356550323|ref|XP_003543537.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Glycine max]
Length = 410
Score = 154 bits (390), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 118/194 (60%), Gaps = 29/194 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSG--------YQQQYSSQGGYASNGAPGQGPQSEGD 52
MTEMNGVYCS+RPMRI AATP+K++G + Y S Q P + D
Sbjct: 166 MTEMNGVYCSTRPMRISAATPKKTTGAYAAPAAPVPKPVYPVPAYTSPVVQVQPP--DYD 223
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
+NTTIFVG LD NV++E+L+Q Q+GEI SVKI GKG GFVQF R +AEEA+ K+
Sbjct: 224 VNNTTIFVGNLDLNVSEEELKQNSLQFGEIVSVKIQPGKGFGFVQFGTRASAEEAIQKMQ 283
Query: 113 GTVIGKQSFRADYG----------NQWSGAYYG-GQVYDGYGYAIPPPNDPSMYAAAAAA 161
G +IG+Q R +G NQWS AYYG GQ Y+ Y Y P +DPS+Y A
Sbjct: 284 GKMIGQQVVRISWGRTLTARQMDPNQWS-AYYGYGQGYEAYAYG--PAHDPSLY-----A 335
Query: 162 YGAYPVYGSHQQQV 175
YGAYP Y + QQV
Sbjct: 336 YGAYPGYAQYPQQV 349
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L V + L F GE+ S+KI K G GFV+F + AE L
Sbjct: 15 TLWIGDLQYWVDEGYLSHCFGHTGEVISIKIIRNKLTGQPEGYGFVEFVSHAAAERVLQT 74
Query: 111 LNGTVI--GKQSFRADYGN 127
NGT + Q+FR ++ +
Sbjct: 75 YNGTQMPATDQTFRLNWAS 93
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALH 109
+IFVG L P+VTD L++ F + Y + K+ KG GFV+F++ A+
Sbjct: 108 SIFVGDLAPDVTDYLLQETFRAHYPSVRGAKVVTDPNTARSKGYGFVKFSDENERNRAMT 167
Query: 110 KLNGTVIGKQSFR 122
++NG + R
Sbjct: 168 EMNGVYCSTRPMR 180
>gi|115446801|ref|NP_001047180.1| Os02g0567900 [Oryza sativa Japonica Group]
gi|113536711|dbj|BAF09094.1| Os02g0567900, partial [Oryza sativa Japonica Group]
Length = 259
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/167 (52%), Positives = 110/167 (65%), Gaps = 27/167 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCS+RP+RIG ATPR+SSG + QS+ DS+N TI+V
Sbjct: 89 MTEMNGAYCSTRPIRIGPATPRRSSGDSGSSPPR-------------QSDSDSTNRTIYV 135
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPN T+++LR+ F++YG++ASVKIPVGK CGFVQF NR +AEEAL LNG+ IGKQ+
Sbjct: 136 GGLDPNATEDELRKAFAKYGDLASVKIPVGKQCGFVQFVNRPDAEEALQGLNGSTIGKQA 195
Query: 121 FRA-------------DYGNQWSGAYYGGQVYDGYGYAIPPPNDPSM 154
R D G++ +G YYG Y GYGYA P P+ P+M
Sbjct: 196 VRLSWGRSPASKQSRGDSGHRRNGMYYGTPFYGGYGYASPLPH-PNM 241
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +VTDE L F+ +Y + K+ + +G GFV+F + +
Sbjct: 27 ASDHSIFVGDLAVDVTDEMLMDLFAKKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKT 86
Query: 106 EALHKLNGTVIGKQSFR 122
A+ ++NG + R
Sbjct: 87 HAMTEMNGAYCSTRPIR 103
>gi|218191015|gb|EEC73442.1| hypothetical protein OsI_07730 [Oryza sativa Indica Group]
Length = 312
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/167 (52%), Positives = 110/167 (65%), Gaps = 27/167 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCS+RP+RIG ATPR+SSG + QS+ DS+N TI+V
Sbjct: 142 MTEMNGAYCSTRPIRIGPATPRRSSGDSGSSPPR-------------QSDSDSTNRTIYV 188
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPN T+++LR+ F++YG++ASVKIPVGK CGFVQF NR +AEEAL LNG+ IGKQ+
Sbjct: 189 GGLDPNATEDELRKAFAKYGDLASVKIPVGKQCGFVQFVNRPDAEEALQGLNGSTIGKQA 248
Query: 121 FRA-------------DYGNQWSGAYYGGQVYDGYGYAIPPPNDPSM 154
R D G++ +G YYG Y GYGYA P P+ P+M
Sbjct: 249 VRLSWGRSPASKQSRGDSGHRRNGMYYGTPFYGGYGYASPLPH-PNM 294
Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +VTDE L F+ +Y + K+ + +G GFV+F + +
Sbjct: 80 ASDHSIFVGDLAVDVTDEMLMDLFAKKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKT 139
Query: 106 EALHKLNGTVIGKQSFR 122
A+ ++NG + R
Sbjct: 140 HAMTEMNGAYCSTRPIR 156
>gi|46806694|dbj|BAD17764.1| putative nucleic acid binding protein [Oryza sativa Japonica Group]
Length = 396
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/167 (52%), Positives = 110/167 (65%), Gaps = 27/167 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCS+RP+RIG ATPR+SSG + QS+ DS+N TI+V
Sbjct: 226 MTEMNGAYCSTRPIRIGPATPRRSSGDSGSSPPR-------------QSDSDSTNRTIYV 272
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPN T+++LR+ F++YG++ASVKIPVGK CGFVQF NR +AEEAL LNG+ IGKQ+
Sbjct: 273 GGLDPNATEDELRKAFAKYGDLASVKIPVGKQCGFVQFVNRPDAEEALQGLNGSTIGKQA 332
Query: 121 FRA-------------DYGNQWSGAYYGGQVYDGYGYAIPPPNDPSM 154
R D G++ +G YYG Y GYGYA P P+ P+M
Sbjct: 333 VRLSWGRSPASKQSRGDSGHRRNGMYYGTPFYGGYGYASPLPH-PNM 378
Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +VTDE L F+ +Y + K+ + +G GFV+F + +
Sbjct: 164 ASDHSIFVGDLAVDVTDEMLMDLFAKKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKT 223
Query: 106 EALHKLNGTVIGKQSFR 122
A+ ++NG + R
Sbjct: 224 HAMTEMNGAYCSTRPIR 240
>gi|449454734|ref|XP_004145109.1| PREDICTED: polyadenylate-binding protein RBP45B-like [Cucumis
sativus]
Length = 404
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/169 (56%), Positives = 110/169 (65%), Gaps = 21/169 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGV+CSSRPMRIG A + +SG QQ S+ Y + QG Q+E D +NTTIFV
Sbjct: 216 MTEMNGVHCSSRPMRIGPAANKNTSGGQQ--FSKTSYQN----PQGAQNENDPNNTTIFV 269
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G LD NVTDE LRQ F QYGE+ VKIPVGK CGFVQFA+R AEEAL LNGT IG Q+
Sbjct: 270 GNLDANVTDEHLRQVFGQYGELVHVKIPVGKRCGFVQFADRNCAEEALRVLNGTQIGGQN 329
Query: 121 FRADYG------------NQWS--GAYYGGQVYDGYGYAIPPPNDPSMY 155
R +G NQW+ G Y GQ Y+ Y YA P P DP+M+
Sbjct: 330 IRLSWGRSPSNKQPQADPNQWNGGGYYGYGQGYENYSYA-PAPQDPNMF 377
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 41 GAP-GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GC 93
G+P GQ PQS T+++G L + + + F+ GE++SVK+ K G
Sbjct: 50 GSPQGQPPQSANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGY 109
Query: 94 GFVQFANRENAEEALHKLNGTVI--GKQSFRADY 125
GF++F R AE L NGT + G Q+FR ++
Sbjct: 110 GFIEFLTRPAAERVLQTYNGTAMPNGAQNFRLNW 143
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQF 98
G + + DS + TIFVG L +VTD L++ F ++Y + K+ + KG GFV+F
Sbjct: 147 GEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKF 206
Query: 99 ANRENAEEALHKLNGTVIGKQSFR 122
+ A+ ++NG + R
Sbjct: 207 GDESEQMRAMTEMNGVHCSSRPMR 230
>gi|226504372|ref|NP_001141359.1| uncharacterized protein LOC100273450 [Zea mays]
gi|194704160|gb|ACF86164.1| unknown [Zea mays]
gi|413921127|gb|AFW61059.1| hypothetical protein ZEAMMB73_234884 [Zea mays]
Length = 453
Score = 151 bits (382), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 111/181 (61%), Gaps = 23/181 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+ CSSRPMRIG A +K++ Q++ S QG QS+ D +NTTIFV
Sbjct: 270 MTEMNGMLCSSRPMRIGPAANKKATVVQEKVPS----------AQGVQSDNDPNNTTIFV 319
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNVT++ L+Q F+ YG++ VKIPVGK CGFVQ+ANR +AEEAL L GT++G Q+
Sbjct: 320 GGLDPNVTEDMLKQVFTPYGDVVHVKIPVGKRCGFVQYANRSSAEEALVILQGTLVGGQN 379
Query: 121 FRADYG-----------NQWSG--AYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 167
R +G NQW+G A Y G Y P DP+MY A AY YP
Sbjct: 380 VRLSWGRSPSNKQVQDSNQWAGANAGYYGYGQGYEAYGYPQSQDPNMYNYGAGAYAGYPN 439
Query: 168 Y 168
Y
Sbjct: 440 Y 440
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFAN 100
+ D+ + TIFVG L +VTD L++ F + Y + K+ KG GFV+F +
Sbjct: 203 EKRDDTPDYTIFVGDLAADVTDYVLQETFRAHYPSVKGAKVVTDKLTMRTKGYGFVKFGD 262
Query: 101 RENAEEALHKLNGTVIGKQSFR 122
A+ ++NG + + R
Sbjct: 263 PNEQARAMTEMNGMLCSSRPMR 284
Score = 38.9 bits (89), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENA 104
G S T+++G L + D + F+ GE+ +VK+ K G GF++F +R A
Sbjct: 116 GPSEVRTLWIGDLQYWMDDNYIYGCFASTGEVQNVKLIRDKHTGQLQGYGFIEFISRAAA 175
Query: 105 EEALHKLNGTVIG--KQSFRADYGN 127
E L NGT++ + FR ++ +
Sbjct: 176 ERVLQTYNGTMMPNVELPFRLNWAS 200
>gi|356550321|ref|XP_003543536.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Glycine max]
Length = 419
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/203 (47%), Positives = 118/203 (58%), Gaps = 38/203 (18%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSG--------YQQQYSSQGGYASNGAPGQGPQSEGD 52
MTEMNGVYCS+RPMRI AATP+K++G + Y S Q P + D
Sbjct: 166 MTEMNGVYCSTRPMRISAATPKKTTGAYAAPAAPVPKPVYPVPAYTSPVVQVQPP--DYD 223
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
+NTTIFVG LD NV++E+L+Q Q+GEI SVKI GKG GFVQF R +AEEA+ K+
Sbjct: 224 VNNTTIFVGNLDLNVSEEELKQNSLQFGEIVSVKIQPGKGFGFVQFGTRASAEEAIQKMQ 283
Query: 113 GTVIGKQSFRADYG-------------------NQWSGAYYG-GQVYDGYGYAIPPPNDP 152
G +IG+Q R +G NQWS AYYG GQ Y+ Y Y P +DP
Sbjct: 284 GKMIGQQVVRISWGRTLTARQDLPGGWGPQMDPNQWS-AYYGYGQGYEAYAYG--PAHDP 340
Query: 153 SMYAAAAAAYGAYPVYGSHQQQV 175
S+Y AYGAYP Y + QQV
Sbjct: 341 SLY-----AYGAYPGYAQYPQQV 358
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L V + L F GE+ S+KI K G GFV+F + AE L
Sbjct: 15 TLWIGDLQYWVDEGYLSHCFGHTGEVISIKIIRNKLTGQPEGYGFVEFVSHAAAERVLQT 74
Query: 111 LNGTVI--GKQSFRADYGN 127
NGT + Q+FR ++ +
Sbjct: 75 YNGTQMPATDQTFRLNWAS 93
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALH 109
+IFVG L P+VTD L++ F + Y + K+ KG GFV+F++ A+
Sbjct: 108 SIFVGDLAPDVTDYLLQETFRAHYPSVRGAKVVTDPNTARSKGYGFVKFSDENERNRAMT 167
Query: 110 KLNGTVIGKQSFR 122
++NG + R
Sbjct: 168 EMNGVYCSTRPMR 180
>gi|356538950|ref|XP_003537963.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Glycine max]
Length = 392
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 117/189 (61%), Gaps = 22/189 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYS---SQGGYASNGAPGQGPQSEGDSSNTT 57
MTEMNGVYCS+RPMRI AATP+K++ +Q QY+ + + + AP E D +NTT
Sbjct: 156 MTEMNGVYCSTRPMRISAATPKKNASFQHQYAPPKAMYQFPAYSAPVSAVAPENDVNNTT 215
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIG 117
+ +G LD NVT+E+L+Q F Q+G+I VKI GKG G+VQF R +AE+A+ ++ G VIG
Sbjct: 216 VCIGNLDLNVTEEELKQTFMQFGDIVLVKIYAGKGYGYVQFGTRVSAEDAIQRMQGKVIG 275
Query: 118 KQSFRADYG----------NQWSGAYYG-GQVYDGYGYAIPPPNDPSMYAAAAAAYGAYP 166
+Q + +G +QWS AYYG GQ Y+ Y Y DPS+Y YGAY
Sbjct: 276 QQVIQISWGSSMTARQMDPSQWS-AYYGYGQGYEAYAYG--ATQDPSIY-----TYGAYA 327
Query: 167 VYGSHQQQV 175
Y + QQV
Sbjct: 328 GYAQYPQQV 336
Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L V + L Q F+ GE+ S+KI K G GFV+F + +AE L
Sbjct: 11 TLWIGDLQYWVDESYLSQCFAHNGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAFLRT 70
Query: 111 LNGTVI--GKQSFRADYGN 127
NG + +Q+FR ++ +
Sbjct: 71 YNGAQMPGTEQTFRLNWAS 89
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 49 SEGDSS-NTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFAN 100
S GDS + +IFVG L P+VTD L++ F + Y + K+ KG GFV+FA+
Sbjct: 89 SFGDSGPDHSIFVGDLAPDVTDFLLQETFRAHYPSVKGAKVVTDPATGRSKGYGFVKFAD 148
Query: 101 RENAEEALHKLNGTVIGKQSFR 122
A+ ++NG + R
Sbjct: 149 EAQRNRAMTEMNGVYCSTRPMR 170
>gi|293337265|ref|NP_001168324.1| uncharacterized protein LOC100382091 [Zea mays]
gi|223947441|gb|ACN27804.1| unknown [Zea mays]
gi|223947469|gb|ACN27818.1| unknown [Zea mays]
gi|413933766|gb|AFW68317.1| hypothetical protein ZEAMMB73_975236, partial [Zea mays]
Length = 406
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/185 (51%), Positives = 119/185 (64%), Gaps = 26/185 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCSSR MR+G A+ +K++G Q S Y + QG S+ D +NTT+FV
Sbjct: 222 MTEMNGQYCSSRAMRLGPASNKKNTGGPQ--PSSAIYQNT----QGTDSDSDPNNTTVFV 275
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDP+VTDE L+Q FS YGE+ VKIPVGK CGFVQ++NR +AEEA+ LNG+ +G QS
Sbjct: 276 GGLDPSVTDELLKQTFSPYGELLYVKIPVGKRCGFVQYSNRASAEEAIRVLNGSQLGGQS 335
Query: 121 FRADYG------------NQWS--GAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYP 166
R +G +QWS G Y Q YD YGYA PP DP+MY AY AYP
Sbjct: 336 IRLSWGRSPANKQPQQEQSQWSGGGYYGYPQGYDPYGYA-RPPQDPAMY-----AYAAYP 389
Query: 167 VYGSH 171
YG++
Sbjct: 390 GYGNY 394
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFV 96
G G + D S+ TIFVG L +VTD L+ F S+Y + K+ KG GFV
Sbjct: 151 GAGEKRGDDGSDYTIFVGDLASDVTDFILQDTFKSRYPSVKGAKVVFDRTTGRSKGYGFV 210
Query: 97 QFANRENAEEALHKLNGTVIGKQSFR 122
+FA+ + A+ ++NG ++ R
Sbjct: 211 KFADSDEQTRAMTEMNGQYCSSRAMR 236
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 11/98 (11%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + + L FSQ GE+ SVKI K G GF++F+N AE+ L
Sbjct: 71 TLWIGDLQYWMDENYLYSCFSQAGEVISVKIIRNKQTGQPEGYGFIEFSNHAVAEQVLQN 130
Query: 111 LNGTVIG--KQSFRADYGNQWSGAYYGGQVYDGYGYAI 146
NG ++ Q F+ ++ +G G DG Y I
Sbjct: 131 YNGQMMPNVNQPFKLNWATSGAGEKRGD---DGSDYTI 165
>gi|242042043|ref|XP_002468416.1| hypothetical protein SORBIDRAFT_01g045570 [Sorghum bicolor]
gi|241922270|gb|EER95414.1| hypothetical protein SORBIDRAFT_01g045570 [Sorghum bicolor]
Length = 415
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/130 (56%), Positives = 95/130 (73%), Gaps = 4/130 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG----QGPQSEGDSSNT 56
MTEMNGVYCS+RPMRI AA P+KS+G Q QYS+ A Q + D +NT
Sbjct: 167 MTEMNGVYCSTRPMRISAAIPKKSTGSQLQYSAAKAVYPATAYAMPQLQAVLPDSDPTNT 226
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
TIF+G LDPNVT+++LRQ Q+GE+ VKIPVGKGCGFVQ+A+R +AEEA+ +L+GT+I
Sbjct: 227 TIFIGNLDPNVTEDELRQICVQFGELIYVKIPVGKGCGFVQYASRASAEEAVQRLHGTMI 286
Query: 117 GKQSFRADYG 126
G+Q+ R +G
Sbjct: 287 GQQAVRLSWG 296
Score = 42.7 bits (99), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEE 106
S+ +IFVG L P+VTD L++ F Y + K+ KG GFV+FA+
Sbjct: 106 SDHSIFVGDLAPDVTDYLLQETFRVNYPSVRGAKVVTDPNTGRSKGYGFVKFADENEKNR 165
Query: 107 ALHKLNGTVIGKQSFR 122
A+ ++NG + R
Sbjct: 166 AMTEMNGVYCSTRPMR 181
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 10/84 (11%)
Query: 57 TIFVGGLDPNVTDED-LRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALH 109
T+++G L TDE+ L F+ GE+ SVKI K G GF++F + E AE+ L
Sbjct: 16 TLWIGDLQ-YWTDENYLYSCFAHTGEVQSVKIIRNKVTSLPEGYGFIEFVSHEAAEKILQ 74
Query: 110 KLNGTVI--GKQSFRADYGNQWSG 131
NGT + + +FR ++ + SG
Sbjct: 75 TYNGTQMPGTEHTFRLNWASFSSG 98
>gi|222640040|gb|EEE68172.1| hypothetical protein OsJ_26296 [Oryza sativa Japonica Group]
Length = 329
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/184 (50%), Positives = 111/184 (60%), Gaps = 28/184 (15%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+ CSSRPMRIG A +K++G Q++ S QG QS+ D SNTTIFV
Sbjct: 139 MTEMNGMVCSSRPMRIGPAANKKATGVQEKVPS----------AQGVQSDSDPSNTTIFV 188
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDP+VTD+ L+Q F+ YG++ VKIPVGK CGFVQFANR +A+EAL L GT+IG Q+
Sbjct: 189 GGLDPSVTDDMLKQVFTPYGDVVHVKIPVGKRCGFVQFANRASADEALVLLQGTLIGGQN 248
Query: 121 FRADYG--------------NQWSG--AYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGA 164
R +G NQW G A Y G GY P DP+MY AY
Sbjct: 249 VRLSWGRSPSNRQAQPQQDSNQWGGANAGYYGYGQGYEGYGYAQPQDPNMY--GYGAYAG 306
Query: 165 YPVY 168
YP Y
Sbjct: 307 YPNY 310
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 19/113 (16%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
GA P Y+ ++S G + D+ + TIFVG L +VTD L++ F
Sbjct: 53 GAMMPNVEQTYRLNWASAG------------EKRDDTPDYTIFVGDLAADVTDYILQETF 100
Query: 77 S-QYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
Y + K+ KG GFV+F + A+ ++NG V + R
Sbjct: 101 RVHYPSVKGAKVVTDKMTMRSKGYGFVKFGDPSEQARAMTEMNGMVCSSRPMR 153
>gi|194702946|gb|ACF85557.1| unknown [Zea mays]
gi|413921126|gb|AFW61058.1| hypothetical protein ZEAMMB73_234884 [Zea mays]
Length = 456
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/184 (48%), Positives = 111/184 (60%), Gaps = 26/184 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+ CSSRPMRIG A +K++ Q++ S QG QS+ D +NTTIFV
Sbjct: 270 MTEMNGMLCSSRPMRIGPAANKKATVVQEKVPS----------AQGVQSDNDPNNTTIFV 319
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNVT++ L+Q F+ YG++ VKIPVGK CGFVQ+ANR +AEEAL L GT++G Q+
Sbjct: 320 GGLDPNVTEDMLKQVFTPYGDVVHVKIPVGKRCGFVQYANRSSAEEALVILQGTLVGGQN 379
Query: 121 FRADYG--------------NQWSG--AYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGA 164
R +G NQW+G A Y G Y P DP+MY A AY
Sbjct: 380 VRLSWGRSPSNKQVQPQQDSNQWAGANAGYYGYGQGYEAYGYPQSQDPNMYNYGAGAYAG 439
Query: 165 YPVY 168
YP Y
Sbjct: 440 YPNY 443
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFAN 100
+ D+ + TIFVG L +VTD L++ F + Y + K+ KG GFV+F +
Sbjct: 203 EKRDDTPDYTIFVGDLAADVTDYVLQETFRAHYPSVKGAKVVTDKLTMRTKGYGFVKFGD 262
Query: 101 RENAEEALHKLNGTVIGKQSFR 122
A+ ++NG + + R
Sbjct: 263 PNEQARAMTEMNGMLCSSRPMR 284
Score = 38.9 bits (89), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENA 104
G S T+++G L + D + F+ GE+ +VK+ K G GF++F +R A
Sbjct: 116 GPSEVRTLWIGDLQYWMDDNYIYGCFASTGEVQNVKLIRDKHTGQLQGYGFIEFISRAAA 175
Query: 105 EEALHKLNGTVIG--KQSFRADYGN 127
E L NGT++ + FR ++ +
Sbjct: 176 ERVLQTYNGTMMPNVELPFRLNWAS 200
>gi|413921124|gb|AFW61056.1| hypothetical protein ZEAMMB73_234884 [Zea mays]
Length = 453
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/184 (48%), Positives = 111/184 (60%), Gaps = 26/184 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+ CSSRPMRIG A +K++ Q++ S QG QS+ D +NTTIFV
Sbjct: 260 MTEMNGMLCSSRPMRIGPAANKKATVVQEKVPS----------AQGVQSDNDPNNTTIFV 309
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNVT++ L+Q F+ YG++ VKIPVGK CGFVQ+ANR +AEEAL L GT++G Q+
Sbjct: 310 GGLDPNVTEDMLKQVFTPYGDVVHVKIPVGKRCGFVQYANRSSAEEALVILQGTLVGGQN 369
Query: 121 FRADYG--------------NQWSG--AYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGA 164
R +G NQW+G A Y G Y P DP+MY A AY
Sbjct: 370 VRLSWGRSPSNKQVQPQQDSNQWAGANAGYYGYGQGYEAYGYPQSQDPNMYNYGAGAYAG 429
Query: 165 YPVY 168
YP Y
Sbjct: 430 YPNY 433
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFAN 100
+ D+ + TIFVG L +VTD L++ F + Y + K+ KG GFV+F +
Sbjct: 193 EKRDDTPDYTIFVGDLAADVTDYVLQETFRAHYPSVKGAKVVTDKLTMRTKGYGFVKFGD 252
Query: 101 RENAEEALHKLNGTVIGKQSFR 122
A+ ++NG + + R
Sbjct: 253 PNEQARAMTEMNGMLCSSRPMR 274
Score = 38.9 bits (89), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENA 104
G S T+++G L + D + F+ GE+ +VK+ K G GF++F +R A
Sbjct: 106 GPSEVRTLWIGDLQYWMDDNYIYGCFASTGEVQNVKLIRDKHTGQLQGYGFIEFISRAAA 165
Query: 105 EEALHKLNGTVIG--KQSFRADYGN 127
E L NGT++ + FR ++ +
Sbjct: 166 ERVLQTYNGTMMPNVELPFRLNWAS 190
>gi|40253807|dbj|BAD05744.1| putative RNA Binding Protein 45 [Oryza sativa Japonica Group]
gi|40253847|dbj|BAD05783.1| putative RNA Binding Protein 45 [Oryza sativa Japonica Group]
Length = 427
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/184 (50%), Positives = 111/184 (60%), Gaps = 28/184 (15%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+ CSSRPMRIG A +K++G Q++ S QG QS+ D SNTTIFV
Sbjct: 244 MTEMNGMVCSSRPMRIGPAANKKATGVQEKVPS----------AQGVQSDSDPSNTTIFV 293
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDP+VTD+ L+Q F+ YG++ VKIPVGK CGFVQFANR +A+EAL L GT+IG Q+
Sbjct: 294 GGLDPSVTDDMLKQVFTPYGDVVHVKIPVGKRCGFVQFANRASADEALVLLQGTLIGGQN 353
Query: 121 FRADYG--------------NQWSG--AYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGA 164
R +G NQW G A Y G GY P DP+MY AY
Sbjct: 354 VRLSWGRSPSNRQAQPQQDSNQWGGANAGYYGYGQGYEGYGYAQPQDPNMY--GYGAYAG 411
Query: 165 YPVY 168
YP Y
Sbjct: 412 YPNY 415
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 19/113 (16%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
GA P Y+ ++S G + D+ + TIFVG L +VTD L++ F
Sbjct: 158 GAMMPNVEQTYRLNWASAG------------EKRDDTPDYTIFVGDLAADVTDYILQETF 205
Query: 77 S-QYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
Y + K+ KG GFV+F + A+ ++NG V + R
Sbjct: 206 RVHYPSVKGAKVVTDKMTMRSKGYGFVKFGDPSEQARAMTEMNGMVCSSRPMR 258
>gi|357113824|ref|XP_003558701.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 418
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 74/131 (56%), Positives = 97/131 (74%), Gaps = 4/131 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQY-SSQGGY--ASNGAPGQGPQ-SEGDSSNT 56
M+EMNGVYCS+RPMRI AA P+KSSG Q QY +++ Y A+ P P + D +NT
Sbjct: 169 MSEMNGVYCSTRPMRISAAIPKKSSGSQLQYGTAKAMYPAAAYAVPQAQPALPDSDLTNT 228
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
TIF+G LDPN T+E+LRQ Q+GE+ VKIPVGKGCGFVQ+A+R +AEEA+ +L+GT+I
Sbjct: 229 TIFIGNLDPNATEEELRQLCVQFGELIYVKIPVGKGCGFVQYASRASAEEAVQRLHGTMI 288
Query: 117 GKQSFRADYGN 127
G+Q R +G
Sbjct: 289 GQQVVRLSWGR 299
Score = 42.4 bits (98), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEA 107
+ +IFVG L P+VTD L++ F Y + K+ KG GFV+FA+ A
Sbjct: 109 DHSIFVGDLAPDVTDYLLQETFRVNYSSVRGAKVVTDPNTGRSKGYGFVKFADENEKTRA 168
Query: 108 LHKLNGTVIGKQSFR 122
+ ++NG + R
Sbjct: 169 MSEMNGVYCSTRPMR 183
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + L F+ GE+ SVKI K G GF++F + E AE+ L
Sbjct: 18 TLWIGDLQFWADEAYLYNCFAHTGEVQSVKIIRNKVTNLPEGYGFIEFISHEAAEKVLQT 77
Query: 111 LNGTVI--GKQSFRADYGNQWSG 131
NG + + +FR ++ + SG
Sbjct: 78 YNGAQMPGSEHTFRLNWASFSSG 100
>gi|226506980|ref|NP_001152183.1| LOC100285821 [Zea mays]
gi|195653617|gb|ACG46276.1| RNA-binding post-transcriptional regulator csx1 [Zea mays]
Length = 415
Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 72/130 (55%), Positives = 94/130 (72%), Gaps = 4/130 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG----QGPQSEGDSSNT 56
MTEMNGVYCS+RPMRI AA P+KS+G Q QYS+ A Q + D +NT
Sbjct: 167 MTEMNGVYCSTRPMRISAAIPKKSTGSQLQYSAAKAVYPATAYAMPQLQAVLPDSDPTNT 226
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
TIF+G LDPNV +++LRQ Q+GE+ VKIPVGKGCGFVQ+A+R +AEEA+ +L+GT+I
Sbjct: 227 TIFIGNLDPNVIEDELRQICVQFGELIYVKIPVGKGCGFVQYASRASAEEAVQRLHGTMI 286
Query: 117 GKQSFRADYG 126
G+Q+ R +G
Sbjct: 287 GQQAVRLSWG 296
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEE 106
S+ +IFVG L P+VTD L++ F Y + K+ KG GFV+FA+
Sbjct: 106 SDHSIFVGDLAPDVTDYLLQETFRVNYSSVRGAKVVTDPNTGRSKGYGFVKFADENEKNR 165
Query: 107 ALHKLNGTVIGKQSFR 122
A+ ++NG + R
Sbjct: 166 AMTEMNGVYCSTRPMR 181
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + L F+ GE+ SVKI K G GF++F + E AE+ L
Sbjct: 16 TLWIGDLQYWTDENYLYSCFAHTGEVQSVKIIRNKVTSLPEGYGFIEFVSHEAAEKILQT 75
Query: 111 LNGTVI--GKQSFRADYGNQWSG 131
NGT + + +FR ++ + SG
Sbjct: 76 YNGTQMPGTEHTFRLNWASFSSG 98
>gi|238005936|gb|ACR34003.1| unknown [Zea mays]
gi|414865083|tpg|DAA43640.1| TPA: RNA-binding post-transcriptional regulator csx1 [Zea mays]
Length = 415
Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 72/130 (55%), Positives = 94/130 (72%), Gaps = 4/130 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG----QGPQSEGDSSNT 56
MTEMNGVYCS+RPMRI AA P+KS+G Q QYS+ A Q + D +NT
Sbjct: 167 MTEMNGVYCSTRPMRISAAIPKKSTGSQLQYSAAKAVYPATAYAMPQLQAVLPDSDPTNT 226
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
TIF+G LDPNV +++LRQ Q+GE+ VKIPVGKGCGFVQ+A+R +AEEA+ +L+GT+I
Sbjct: 227 TIFIGNLDPNVIEDELRQICVQFGELIYVKIPVGKGCGFVQYASRASAEEAVQRLHGTMI 286
Query: 117 GKQSFRADYG 126
G+Q+ R +G
Sbjct: 287 GQQAVRLSWG 296
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEE 106
S+ +IFVG L P+VTD L++ F Y + K+ KG GFV+FA+
Sbjct: 106 SDHSIFVGDLAPDVTDYLLQETFRVNYSSVRGAKVVTDPNTGRSKGYGFVKFADENEKNR 165
Query: 107 ALHKLNGTVIGKQSFR 122
A+ ++NG + R
Sbjct: 166 AMTEMNGVYCSTRPMR 181
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + L F+ GE+ SVKI K G GF++F + E AE+ L
Sbjct: 16 TLWIGDLQYWTDENYLYSCFAHTGEVQSVKIIRNKVTSLPEGYGFIEFVSHEAAEKILQT 75
Query: 111 LNGTVI--GKQSFRADYGNQWSG 131
NGT + + +FR ++ + SG
Sbjct: 76 YNGTQMPGTEHTFRLNWASFSSG 98
>gi|414886904|tpg|DAA62918.1| TPA: hypothetical protein ZEAMMB73_604225 [Zea mays]
Length = 484
Score = 148 bits (374), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 86/171 (50%), Positives = 108/171 (63%), Gaps = 21/171 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+ S+R MRIGAA +K+ QQ Y++ G Y S+ +G SE D +NTT+FV
Sbjct: 268 MTEMNGMLLSTRQMRIGAAANKKNRDAQQTYATDGAYQSS----KGNSSENDPNNTTVFV 323
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLD NV +E LRQ F+ YGEI+ VKIPVGK CGFVQF +R AEEA+ LNG+ +G Q
Sbjct: 324 GGLDSNVNEEYLRQIFTPYGEISYVKIPVGKHCGFVQFTSRSCAEEAIRMLNGSQVGGQK 383
Query: 121 FRADYG--------------NQWSG-AYYGGQV--YDGYGYAIPPPNDPSM 154
R +G NQ++G +YYG Q Y+GYGY DPSM
Sbjct: 384 VRLSWGRSPQNRQASQHDANNQYNGNSYYGYQQPGYEGYGYGASSAQDPSM 434
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 37 YASNGAPGQGPQSEGDS-SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG---- 90
+ N A GDS S+ TIFVG L +VTD L F ++Y + + V
Sbjct: 189 FKLNWASASTGDKRGDSGSDRTIFVGDLAHDVTDSMLEDVFRAKYPSVRGANVVVDRMTG 248
Query: 91 --KGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
KG GFV+F + A+ ++NG ++ + R
Sbjct: 249 WPKGFGFVRFGDLNEQARAMTEMNGMLLSTRQMR 282
>gi|226491568|ref|NP_001142233.1| uncharacterized protein LOC100274401 [Zea mays]
gi|194707728|gb|ACF87948.1| unknown [Zea mays]
gi|414886903|tpg|DAA62917.1| TPA: hypothetical protein ZEAMMB73_604225 [Zea mays]
Length = 465
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/171 (50%), Positives = 108/171 (63%), Gaps = 21/171 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+ S+R MRIGAA +K+ QQ Y++ G Y S+ +G SE D +NTT+FV
Sbjct: 268 MTEMNGMLLSTRQMRIGAAANKKNRDAQQTYATDGAYQSS----KGNSSENDPNNTTVFV 323
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLD NV +E LRQ F+ YGEI+ VKIPVGK CGFVQF +R AEEA+ LNG+ +G Q
Sbjct: 324 GGLDSNVNEEYLRQIFTPYGEISYVKIPVGKHCGFVQFTSRSCAEEAIRMLNGSQVGGQK 383
Query: 121 FRADYG--------------NQWSG-AYYGGQV--YDGYGYAIPPPNDPSM 154
R +G NQ++G +YYG Q Y+GYGY DPSM
Sbjct: 384 VRLSWGRSPQNRQASQHDANNQYNGNSYYGYQQPGYEGYGYGASSAQDPSM 434
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 37 YASNGAPGQGPQSEGDS-SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG---- 90
+ N A GDS S+ TIFVG L +VTD L F ++Y + + V
Sbjct: 189 FKLNWASASTGDKRGDSGSDRTIFVGDLAHDVTDSMLEDVFRAKYPSVRGANVVVDRMTG 248
Query: 91 --KGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
KG GFV+F + A+ ++NG ++ + R
Sbjct: 249 WPKGFGFVRFGDLNEQARAMTEMNGMLLSTRQMR 282
>gi|149391493|gb|ABR25764.1| nucleic acid binding protein [Oryza sativa Indica Group]
Length = 151
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/138 (56%), Positives = 101/138 (73%), Gaps = 17/138 (12%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
S+GDS+N T++VGGLDPNV++++LR+ F++YG++ASVKIP+GK CGFVQF +R +AEEA
Sbjct: 15 HSDGDSTNRTVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEA 74
Query: 108 LHKLNGTVIGKQSF-------------RADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSM 154
L LNG+VIGKQ+ RAD G++ + YYG Y GYGYA P P+ P+M
Sbjct: 75 LQGLNGSVIGKQAVRLSWGRSPSHKQSRADSGSRRNNMYYGTPFYGGYGYASPVPH-PNM 133
Query: 155 YAAAAAAYGAYPVYGSHQ 172
Y AAAYGAYPVYGS Q
Sbjct: 134 Y---AAAYGAYPVYGSQQ 148
>gi|255563907|ref|XP_002522953.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223537765|gb|EEF39383.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 404
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/186 (51%), Positives = 112/186 (60%), Gaps = 28/186 (15%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M EMNG YCS+R MRIG A +K + Q Q + Y S QG Q E D +NTTIFV
Sbjct: 218 MVEMNGQYCSTRAMRIGPAATKKPAVQQYQ---KAPYQST----QGTQGENDPNNTTIFV 270
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G LDP+V+DE LRQ F +YGE+ VKIP GK CGFVQFANR AE+AL LNGT + QS
Sbjct: 271 GALDPSVSDEHLRQVFGKYGELVHVKIPAGKRCGFVQFANRACAEQALLGLNGTQLAGQS 330
Query: 121 FRADYG------------NQWSGAYYGGQVY-DGYGYAIPPPNDPSMYAAAAAAYGAYPV 167
R +G +QW+G YYG D YGYA PP DP+MY Y YP
Sbjct: 331 IRLSWGRSPSNKQAQPDQSQWNGGYYGYAQGYDAYGYA--PPQDPNMY------YSGYPG 382
Query: 168 YGSHQQ 173
YG++QQ
Sbjct: 383 YGNYQQ 388
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQF 98
G + + D + T+FVG L P+V D L++ F + Y + K+ KG GFV+F
Sbjct: 149 GERRQDDGPDYTVFVGDLAPDVNDFILQETFRTVYPSVKGAKVVTDRLTGRTKGYGFVRF 208
Query: 99 ANRENAEEALHKLNGTVIGKQSFR 122
+ A+ ++NG ++ R
Sbjct: 209 GDENEQRRAMVEMNGQYCSTRAMR 232
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
++++G L + + L FS GE+ S K+ K G GF++F NR AE L
Sbjct: 67 SLWIGDLQQWMDEGYLFNIFSGTGEVVSAKVIRNKQTGMPEGYGFIEFINRAAAERILQT 126
Query: 111 LNGTVI--GKQSFRADYGNQWSG 131
NGT + +Q+FR ++ +G
Sbjct: 127 YNGTQMPNTEQNFRLNWATLAAG 149
>gi|375152130|gb|AFA36523.1| nucleic acid binding protein, partial [Lolium perenne]
Length = 164
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/126 (54%), Positives = 95/126 (75%), Gaps = 14/126 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+YCS+RP+RIG ATPR++ G + + PG S+GDS+N T++V
Sbjct: 35 MTEMNGIYCSTRPIRIGPATPRRT-----------GDSGSSTPGH---SDGDSTNRTVYV 80
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV++++LR+ F++YG++ASVKIP+GK CGFVQ+ NR +A+EAL LNG+VIGKQ
Sbjct: 81 GGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQYVNRTDAKEALQGLNGSVIGKQV 140
Query: 121 FRADYG 126
R +G
Sbjct: 141 VRLSWG 146
>gi|356538948|ref|XP_003537962.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Glycine max]
Length = 401
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/198 (43%), Positives = 117/198 (59%), Gaps = 31/198 (15%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYS---SQGGYASNGAPGQGPQSEGDSSNTT 57
MTEMNGVYCS+RPMRI AATP+K++ +Q QY+ + + + AP E D +NTT
Sbjct: 156 MTEMNGVYCSTRPMRISAATPKKNASFQHQYAPPKAMYQFPAYSAPVSAVAPENDVNNTT 215
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIG 117
+ +G LD NVT+E+L+Q F Q+G+I VKI GKG G+VQF R +AE+A+ ++ G VIG
Sbjct: 216 VCIGNLDLNVTEEELKQTFMQFGDIVLVKIYAGKGYGYVQFGTRVSAEDAIQRMQGKVIG 275
Query: 118 KQSFRADYG-------------------NQWSGAYYG-GQVYDGYGYAIPPPNDPSMYAA 157
+Q + +G +QWS AYYG GQ Y+ Y Y DPS+Y
Sbjct: 276 QQVIQISWGSSMTARQDVPGGWGVQMDPSQWS-AYYGYGQGYEAYAYG--ATQDPSIY-- 330
Query: 158 AAAAYGAYPVYGSHQQQV 175
YGAY Y + QQV
Sbjct: 331 ---TYGAYAGYAQYPQQV 345
Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L V + L Q F+ GE+ S+KI K G GFV+F + +AE L
Sbjct: 11 TLWIGDLQYWVDESYLSQCFAHNGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAFLRT 70
Query: 111 LNGTVI--GKQSFRADYGN 127
NG + +Q+FR ++ +
Sbjct: 71 YNGAQMPGTEQTFRLNWAS 89
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 49 SEGDSS-NTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFAN 100
S GDS + +IFVG L P+VTD L++ F + Y + K+ KG GFV+FA+
Sbjct: 89 SFGDSGPDHSIFVGDLAPDVTDFLLQETFRAHYPSVKGAKVVTDPATGRSKGYGFVKFAD 148
Query: 101 RENAEEALHKLNGTVIGKQSFR 122
A+ ++NG + R
Sbjct: 149 EAQRNRAMTEMNGVYCSTRPMR 170
>gi|356548971|ref|XP_003542872.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 409
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/175 (50%), Positives = 105/175 (60%), Gaps = 25/175 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEM GV CS+RPMRIG A+ + + Q +S N P QG Q+E D +NTTIFV
Sbjct: 219 MTEMQGVLCSTRPMRIGPASNKTPTTQSQPKAS----YQNSQP-QGSQNENDPNNTTIFV 273
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G LDPNVTD+ LRQ FSQYGE+ VKIP GK CGFVQFA+R AEEAL LNGT++G Q+
Sbjct: 274 GNLDPNVTDDHLRQVFSQYGELVHVKIPAGKRCGFVQFADRSCAEEALRVLNGTLLGGQN 333
Query: 121 FRADYG------------NQWS--------GAYYGGQVYDGYGYAIPPPNDPSMY 155
R +G NQW+ Y Q Y+ YGYA DP+MY
Sbjct: 334 VRLSWGRSPSNKQAQADPNQWNGGAGSGGGYYGYAAQGYENYGYAPAAGQDPNMY 388
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + + L F+ GE+ SVK+ K G GF++F +R AE L
Sbjct: 67 TLWIGDLQYWMDENYLYTCFAHTGEVTSVKVIRNKQTSQSEGYGFIEFNSRAGAERILQT 126
Query: 111 LNGTVI--GKQSFRADYG 126
NG ++ G QSFR ++
Sbjct: 127 YNGAIMPNGGQSFRLNWA 144
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFANRENA 104
DS + TIFVG L +VTD L++ F ++Y + K+ + KG GFV+F++
Sbjct: 156 DSPDYTIFVGDLAADVTDYLLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVRFSDESEQ 215
Query: 105 EEALHKLNGTVIGKQSFR 122
A+ ++ G + + R
Sbjct: 216 VRAMTEMQGVLCSTRPMR 233
>gi|30524689|emb|CAC85246.1| salt tolerance protein 6 [Beta vulgaris]
Length = 322
Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 84/168 (50%), Positives = 99/168 (58%), Gaps = 25/168 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M+EMNG+ C R MRIGAA +KS G Y + QG ++ D SNTTIFV
Sbjct: 142 MSEMNGMMCLGRAMRIGAAANKKSVGGTASYQN----------NQGTPNDSDPSNTTIFV 191
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G LD NVTDE LRQ FS YGE+ VKIP GK CGFVQF NR +AEEAL LNG +G ++
Sbjct: 192 GNLDSNVTDEHLRQTFSPYGELVHVKIPAGKQCGFVQFTNRSSAEEALRVLNGMQLGGRN 251
Query: 121 FRADYG------------NQWSGAYYGG--QVYDGYGYAIPPPNDPSM 154
R +G NQW+ A Y G Q YD YGY + P DP+M
Sbjct: 252 VRLSWGRSPNNRQSQPDQNQWNNAAYYGYPQGYDSYGY-VSAPQDPNM 298
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFV 96
G G + D+S+ TIFVG L P+VTD L++ F +Y + K+ + KG GFV
Sbjct: 71 GSGEKRGEDASDYTIFVGDLAPDVTDYTLQETFRVRYPSVKGAKVVIDRLTSRSKGYGFV 130
Query: 97 QFANRENAEEALHKLNGTVIGKQSFR 122
+F + A+ ++NG + ++ R
Sbjct: 131 RFGDESEQARAMSEMNGMMCLGRAMR 156
>gi|356555656|ref|XP_003546146.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 411
Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 113/194 (58%), Gaps = 35/194 (18%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEM GV CS+RPMRIG A+ + + Q +S N P QG Q+E D +NTTIFV
Sbjct: 220 MTEMQGVLCSTRPMRIGPASNKTPATQSQPKAS----YLNSQP-QGSQNENDPNNTTIFV 274
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G LDPNVTD+ LRQ FSQYGE+ VKIP GK CGFVQFA+R AEEAL LNGT++G Q+
Sbjct: 275 GNLDPNVTDDHLRQVFSQYGELVHVKIPAGKRCGFVQFADRSCAEEALRVLNGTLLGGQN 334
Query: 121 FRADYG------------NQWS----------GAYYGGQVYDGYGYAIPPPNDPSMYAAA 158
R +G NQW+ Y Q Y+ YGYA P DP+M
Sbjct: 335 VRLSWGRSPSNKQAQADPNQWNGAAGAGSGGGYYGYAAQGYENYGYA-PAGQDPNM---- 389
Query: 159 AAAYGAYPVYGSHQ 172
YG+YP Y +Q
Sbjct: 390 ---YGSYPGYPGYQ 400
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Query: 29 QQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP 88
Q + Q +A + P Q T+++G L + + L F+ GE++SVK+
Sbjct: 40 QHQAPQPMWAPSAQPPLPQQPASADEVRTLWIGDLQYWMDENYLYTCFAHTGEVSSVKVI 99
Query: 89 VGK------GCGFVQFANRENAEEALHKLNGTVI--GKQSFRADYG 126
K G GF++F +R AE L NG ++ G QSFR ++
Sbjct: 100 RNKQTSQSEGYGFIEFNSRAGAERILQTYNGAIMPNGGQSFRLNWA 145
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFANRE 102
+ DS + TIFVG L +VTD L++ F ++Y + K+ + KG GFV+F+
Sbjct: 155 QDDSPDYTIFVGDLAADVTDYLLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVRFSEES 214
Query: 103 NAEEALHKLNGTVIGKQSFR 122
A+ ++ G + + R
Sbjct: 215 EQMRAMTEMQGVLCSTRPMR 234
>gi|222629596|gb|EEE61728.1| hypothetical protein OsJ_16246 [Oryza sativa Japonica Group]
Length = 607
Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 72/130 (55%), Positives = 91/130 (70%), Gaps = 10/130 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+ CSSRPMRIG A +K++G Q++ + QG QSE D +NTTIFV
Sbjct: 188 MTEMNGMLCSSRPMRIGPAANKKTTGVQERVPN----------AQGAQSENDPNNTTIFV 237
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNVT++ L+Q F+ YGE+ VKIPVGK CGFVQ+ NR +AE+AL L GT+IG Q+
Sbjct: 238 GGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRCGFVQYVNRPSAEQALAVLQGTLIGGQN 297
Query: 121 FRADYGNQWS 130
R +G S
Sbjct: 298 VRLSWGRSLS 307
Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQY------GEIASVKIPV-GKGCGFVQFAN 100
+ D+ + TIFVG L +VTD L++ F + ++ + K+ + KG GFV+F +
Sbjct: 121 EKRDDTPDYTIFVGDLAADVTDYLLQETFRVHYPSVKGAKVVTDKMTMRSKGYGFVKFGD 180
Query: 101 RENAEEALHKLNGTVIGKQSFR 122
A+ ++NG + + R
Sbjct: 181 PTEQARAMTEMNGMLCSSRPMR 202
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L P + + + F+ GE+ SVK+ K G GFV+F +R A+ L
Sbjct: 40 TLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADRILQT 99
Query: 111 LNGTVI--GKQSFRADYGN 127
NG ++ + FR ++ +
Sbjct: 100 YNGQMMPNVEMVFRLNWAS 118
>gi|449454730|ref|XP_004145107.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
sativus]
gi|449472157|ref|XP_004153511.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
sativus]
Length = 408
Score = 145 bits (365), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 92/174 (52%), Positives = 108/174 (62%), Gaps = 26/174 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGV+CSSRPMRIG A + +SG QQ S+ Y + G Q+E D +NTTIFV
Sbjct: 216 MTEMNGVHCSSRPMRIGPAANKNTSGSQQ--FSKTSYQN----PPGTQNENDPNNTTIFV 269
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G LD NVTDE LRQ FSQYGE+ VKIP GK CGFVQF++R AEEAL LNGT IG Q+
Sbjct: 270 GNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCAEEALRILNGTPIGGQN 329
Query: 121 FRADYG------------NQWS-------GAYYGGQVYDGYGYAIPPPNDPSMY 155
R +G NQW+ G Y GQ Y+ Y YA P DP+M+
Sbjct: 330 IRLSWGRSPSNKQPQADPNQWNGGGGGGGGYYGYGQGYENYSYA-PAAQDPNMF 382
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 41 GAP-GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GC 93
G+P GQ PQ T+++G L + + + F+ GE++SVK+ K G
Sbjct: 50 GSPQGQPPQPANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGY 109
Query: 94 GFVQFANRENAEEALHKLNGTVI--GKQSFRADY 125
GF++F R AE L NGT + G Q+FR ++
Sbjct: 110 GFIEFLTRPAAERVLQTYNGTAMPNGAQNFRLNW 143
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 13/119 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQF 98
G + + DS + TIFVG L +VTD L++ F ++Y + K+ + KG GFV+F
Sbjct: 147 GEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKF 206
Query: 99 ANRENAEEALHKLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPP----PNDPS 153
+ A+ ++NG + R G + G Q + Y PP NDP+
Sbjct: 207 GDESEQIRAMTEMNGVHCSSRPMR--IGPAANKNTSGSQQFSKTSYQNPPGTQNENDPN 263
>gi|357144721|ref|XP_003573391.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Brachypodium distachyon]
Length = 435
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/188 (48%), Positives = 108/188 (57%), Gaps = 32/188 (17%)
Query: 1 MTEMNGVYCSSRPMRIG-AATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIF 59
MTEMNG+ CSSRPMRIG AA +K SG Q++ S QG QS+ D SNTTIF
Sbjct: 247 MTEMNGMVCSSRPMRIGPAANKQKVSGAQEKVPS----------AQGVQSDSDPSNTTIF 296
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQ 119
VGGLDPNVT++ L+Q F+ YGE+ VKIPVGK CGFVQ+A+R ++EEAL L GTVIG Q
Sbjct: 297 VGGLDPNVTEDMLKQVFAPYGEVVHVKIPVGKRCGFVQYASRSSSEEALLMLQGTVIGGQ 356
Query: 120 SFRADYG--------------NQWSGAYYGGQVYDGYGYAIPP-----PNDPSMYAAAAA 160
+ R +G NQW GA Y P DP+MY
Sbjct: 357 NVRLSWGRSPSNKQVQTPQDSNQWGGATANAGYYGYGQGYEAYGYAAQPQDPNMY--GYG 414
Query: 161 AYGAYPVY 168
AY YP Y
Sbjct: 415 AYAGYPNY 422
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 19/113 (16%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
GA P Y+ ++S G + D + TIFVG L +VTD L++ F
Sbjct: 161 GATMPNVEMPYRLNWASAG------------EKRDDGPDYTIFVGDLAADVTDYILQETF 208
Query: 77 S-QYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
Y + K+ KG GFV+F++ A+ ++NG V + R
Sbjct: 209 RVHYPSVKGAKVVTDKLTMRSKGYGFVKFSDPTEQTRAMTEMNGMVCSSRPMR 261
Score = 36.6 bits (83), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 10/96 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + + + F+ GE+ SVK+ K G GFV+F R AE L
Sbjct: 99 TLWIGDLQYWMDENYVYGCFAHTGEVQSVKLIRDKQTGQLQGYGFVEFTTRAGAERVLQT 158
Query: 111 LNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAI 146
NG + + Y W+ A G + DG Y I
Sbjct: 159 YNGATM--PNVEMPYRLNWASA--GEKRDDGPDYTI 190
>gi|125549823|gb|EAY95645.1| hypothetical protein OsI_17510 [Oryza sativa Indica Group]
Length = 426
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/130 (55%), Positives = 91/130 (70%), Gaps = 10/130 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+ CSSRPMRIG A +K++G Q++ + QG QSE D +NTTIFV
Sbjct: 240 MTEMNGMLCSSRPMRIGPAANKKTTGVQERVPN----------AQGAQSENDPNNTTIFV 289
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNVT++ L+Q F+ YGE+ VKIPVGK CGFVQ+ NR +AE+AL L GT+IG Q+
Sbjct: 290 GGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRCGFVQYVNRPSAEQALAVLQGTLIGGQN 349
Query: 121 FRADYGNQWS 130
R +G S
Sbjct: 350 VRLSWGRSLS 359
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFAN 100
+ D+ + TIFVG L +VTD L++ F Y + K+ KG GFV+F +
Sbjct: 173 EKRDDTPDYTIFVGDLAADVTDYLLQETFRVHYPSVKGAKVVTDKMTMRSKGYGFVKFGD 232
Query: 101 RENAEEALHKLNGTVIGKQSFR 122
A+ ++NG + + R
Sbjct: 233 PTEQARAMTEMNGMLCSSRPMR 254
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L P + + + F+ GE+ SVK+ K G GFV+F +R A+ L
Sbjct: 92 TLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADRILQT 151
Query: 111 LNGTVIG--KQSFRADYGN 127
NG ++ + FR ++ +
Sbjct: 152 YNGQMMPNVEMVFRLNWAS 170
>gi|115460682|ref|NP_001053941.1| Os04g0625800 [Oryza sativa Japonica Group]
gi|113565512|dbj|BAF15855.1| Os04g0625800 [Oryza sativa Japonica Group]
gi|215767966|dbj|BAH00195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 425
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/130 (55%), Positives = 91/130 (70%), Gaps = 10/130 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+ CSSRPMRIG A +K++G Q++ + QG QSE D +NTTIFV
Sbjct: 239 MTEMNGMLCSSRPMRIGPAANKKTTGVQERVPN----------AQGAQSENDPNNTTIFV 288
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNVT++ L+Q F+ YGE+ VKIPVGK CGFVQ+ NR +AE+AL L GT+IG Q+
Sbjct: 289 GGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRCGFVQYVNRPSAEQALAVLQGTLIGGQN 348
Query: 121 FRADYGNQWS 130
R +G S
Sbjct: 349 VRLSWGRSLS 358
Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFAN 100
+ D+ + TIFVG L +VTD L++ F Y + K+ KG GFV+F +
Sbjct: 172 EKRDDTPDYTIFVGDLAADVTDYLLQETFRVHYPSVKGAKVVTDKMTMRSKGYGFVKFGD 231
Query: 101 RENAEEALHKLNGTVIGKQSFR 122
A+ ++NG + + R
Sbjct: 232 PTEQARAMTEMNGMLCSSRPMR 253
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L P + + + F+ GE+ SVK+ K G GFV+F +R A+ L
Sbjct: 91 TLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADRILQT 150
Query: 111 LNGTVIG--KQSFRADYGN 127
NG ++ + FR ++ +
Sbjct: 151 YNGQMMPNVEMVFRLNWAS 169
>gi|39545835|emb|CAE04743.3| OSJNBb0060E08.6 [Oryza sativa Japonica Group]
gi|116309791|emb|CAH66831.1| OSIGBa0148A10.8 [Oryza sativa Indica Group]
Length = 414
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/130 (55%), Positives = 91/130 (70%), Gaps = 10/130 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+ CSSRPMRIG A +K++G Q++ + QG QSE D +NTTIFV
Sbjct: 228 MTEMNGMLCSSRPMRIGPAANKKTTGVQERVPN----------AQGAQSENDPNNTTIFV 277
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNVT++ L+Q F+ YGE+ VKIPVGK CGFVQ+ NR +AE+AL L GT+IG Q+
Sbjct: 278 GGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRCGFVQYVNRPSAEQALAVLQGTLIGGQN 337
Query: 121 FRADYGNQWS 130
R +G S
Sbjct: 338 VRLSWGRSLS 347
Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFAN 100
+ D+ + TIFVG L +VTD L++ F Y + K+ KG GFV+F +
Sbjct: 161 EKRDDTPDYTIFVGDLAADVTDYLLQETFRVHYPSVKGAKVVTDKMTMRSKGYGFVKFGD 220
Query: 101 RENAEEALHKLNGTVIGKQSFR 122
A+ ++NG + + R
Sbjct: 221 PTEQARAMTEMNGMLCSSRPMR 242
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L P + + + F+ GE+ SVK+ K G GFV+F +R A+ L
Sbjct: 80 TLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADRILQT 139
Query: 111 LNGTVIG--KQSFRADYGN 127
NG ++ + FR ++ +
Sbjct: 140 YNGQMMPNVEMVFRLNWAS 158
>gi|84468322|dbj|BAE71244.1| putative DNA binding protein [Trifolium pratense]
Length = 402
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/195 (46%), Positives = 114/195 (58%), Gaps = 36/195 (18%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEM GV CS+RPMRIG AT + + ++Q + + PG QSE D +NTTIFV
Sbjct: 211 MTEMQGVLCSTRPMRIGPATNKNPAA-----TTQAKASYSNTPGG--QSENDPNNTTIFV 263
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G LDPNVTD+ LRQ FSQYGE+ VKIP GK CGFVQF++R +AEEA+ LNGT++G Q+
Sbjct: 264 GNLDPNVTDDHLRQVFSQYGELVHVKIPSGKRCGFVQFSDRSSAEEAIRVLNGTLLGGQN 323
Query: 121 FRADYG------------NQWSGAYYGGQVY---------DGYGYAIPPP-NDPSMYAAA 158
R +G NQW+ A GG + YGYA P DP++
Sbjct: 324 VRLSWGRTPSNKQTQQDPNQWNAAAAGGGGGYYGYPQGGYENYGYAAAPAGQDPNV---- 379
Query: 159 AAAYGAYPVYGSHQQ 173
YG+YP Y +Q
Sbjct: 380 ---YGSYPGYAGYQH 391
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 34 QGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK-- 91
Q +A + P Q P S + T+++G L + + L F GE+ SVK+ K
Sbjct: 37 QALWAQSAQPPQQPASADEVR--TLWIGDLQYWMDENYLYTCFGNTGEVTSVKVIRNKQT 94
Query: 92 ----GCGFVQFANRENAEEALHKLNGTVI--GKQSFRADY 125
G GF++F R +AE L G ++ G QS+R ++
Sbjct: 95 SQSEGYGFIEFNTRASAERVLQTYQGAIMPNGGQSYRLNW 134
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFV 96
G+ + D + TIFVG L +VTD L++ F ++Y + K+ + KG GFV
Sbjct: 140 GERSSRQDDGPDHTIFVGDLAADVTDYLLQETFRARYNSVKGAKVVIDRLTGRSKGYGFV 199
Query: 97 QFANRENAEEALHKLNGTVIGKQSFR 122
+FA+ A+ ++ G + + R
Sbjct: 200 RFADEGEQMRAMTEMQGVLCSTRPMR 225
>gi|357166074|ref|XP_003580589.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Brachypodium distachyon]
Length = 426
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/126 (57%), Positives = 89/126 (70%), Gaps = 8/126 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+ CSSRPMRIG A RK++G Q++ + QG QS+ D +NTTIFV
Sbjct: 237 MTEMNGMPCSSRPMRIGPAANRKTTGVQERVPNTNT--------QGAQSDNDPNNTTIFV 288
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNVT++ L+Q F+ YGE+ VKIPVGK CGFVQF NR +AE+AL L GT IG Q+
Sbjct: 289 GGLDPNVTEDALKQVFAPYGEVIHVKIPVGKRCGFVQFVNRPSAEQALQMLQGTPIGGQN 348
Query: 121 FRADYG 126
R +G
Sbjct: 349 VRLSWG 354
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 47/113 (41%), Gaps = 19/113 (16%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G A P Y+ ++S G + D+ + TIFVG L +VTD L++ F
Sbjct: 151 GHAMPNVDLAYRLNWASAG------------EKRDDTPDYTIFVGDLAADVTDYILQETF 198
Query: 77 S-QYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
Y + K+ KG GFV+F + A+ ++NG + R
Sbjct: 199 RVHYPSVKGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMR 251
>gi|326513006|dbj|BAK03410.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326525779|dbj|BAJ88936.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 436
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/191 (46%), Positives = 109/191 (57%), Gaps = 31/191 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+ CSSRPMRIG A RK++G Q++ QG QS+ D +NTTIFV
Sbjct: 240 MTEMNGMPCSSRPMRIGPAANRKTTGVQERVPIPNTNT------QGAQSDNDPNNTTIFV 293
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNVT++ L+Q F+ YGE+ VKIPVGK CGFVQ+ANR +AE+AL L GT++G Q+
Sbjct: 294 GGLDPNVTEDALKQVFAPYGEVVHVKIPVGKRCGFVQYANRPSAEQALQLLQGTLVGGQN 353
Query: 121 FRADYG-------------NQW----------SGAYYGGQVYDGYGYAIPPPNDPSMYAA 157
R +G QW GQ Y+ YG P DP+MY
Sbjct: 354 VRLSWGRSPSNKQTQPQEATQWGAGAAAGAAGGYYAGYGQGYEAYGQGYAQPQDPNMY-- 411
Query: 158 AAAAYGAYPVY 168
AY YP Y
Sbjct: 412 GYGAYAGYPNY 422
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFAN 100
+ D+ + TIFVG L +VTD L++ F Y + K+ KG GFV+F +
Sbjct: 173 EKRDDTPDYTIFVGDLAADVTDYMLQETFRVHYPSVKGAKVVTDKMTMRSKGYGFVKFGD 232
Query: 101 RENAEEALHKLNGTVIGKQSFR 122
A+ ++NG + R
Sbjct: 233 PTEQARAMTEMNGMPCSSRPMR 254
>gi|297807995|ref|XP_002871881.1| hypothetical protein ARALYDRAFT_488820 [Arabidopsis lyrata subsp.
lyrata]
gi|297317718|gb|EFH48140.1| hypothetical protein ARALYDRAFT_488820 [Arabidopsis lyrata subsp.
lyrata]
Length = 426
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/199 (47%), Positives = 116/199 (58%), Gaps = 25/199 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGA---------PGQGPQSEG 51
M EMNG+YCS+RPMRI AATP+K+ G QQQY ++G S A PGQG E
Sbjct: 174 MAEMNGLYCSTRPMRISAATPKKNVGVQQQYVTKGPVPSAVAAPVQAYIAQPGQGLPPES 233
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D + TTI + LDPNVT+E+L++ FSQ GEI VKIP KG G+VQF R +AEEA+ K+
Sbjct: 234 DVTCTTISIANLDPNVTEEELKKAFSQLGEIIYVKIPATKGYGYVQFKTRPSAEEAVQKM 293
Query: 112 NGTVIGKQSFRADYG--------------NQWSGAYYGGQVYDGYGYAIPPPNDPSMYAA 157
G VIG+Q+ R + NQW+G Y GQ YD YGY DPS+YA
Sbjct: 294 QGQVIGQQAVRISWSKNPGQDGWVAQADPNQWNGYYGYGQGYDAYGYGT--TQDPSLYAY 351
Query: 158 AAAAYGAYPVYGSHQQQVS 176
Y YP G Q +S
Sbjct: 352 GGYGYPQYPQQGEGTQDIS 370
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L V + L FSQ GE+ SVK+ K G GF++F + AE L
Sbjct: 24 TLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERTLQT 83
Query: 111 LNGTVI--GKQSFRADYGNQWSG 131
NGT + + +FR ++ + SG
Sbjct: 84 YNGTQMPGTELTFRLNWASFGSG 106
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEALH 109
+IFVG L P+VTD L++ F Y + K+ KG GFV+FA A+
Sbjct: 116 SIFVGDLAPDVTDYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMA 175
Query: 110 KLNGTVIGKQSFR 122
++NG + R
Sbjct: 176 EMNGLYCSTRPMR 188
>gi|356521983|ref|XP_003529629.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 397
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/188 (47%), Positives = 108/188 (57%), Gaps = 32/188 (17%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEM GV CS+RPMRIG A+ + S Q +S QG Q+E D +NTTIFV
Sbjct: 213 MTEMQGVLCSTRPMRIGPASNKNPSTQSQPKASYQN-------PQGAQNEHDPNNTTIFV 265
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G LDPNVTD+ LRQ F YGE+ VKIP GK CGFVQFA+R AEEAL LNGT++G Q+
Sbjct: 266 GNLDPNVTDDHLRQVFGHYGELVHVKIPAGKRCGFVQFADRSCAEEALRVLNGTLLGGQN 325
Query: 121 FRADYG------------NQWS-----GAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYG 163
R +G NQW+ Y Y+ YGYA P DP+M YG
Sbjct: 326 VRLSWGRSPSNKQAQPDANQWNGSGGGYYGYAQGGYENYGYA-PAGQDPNM-------YG 377
Query: 164 AYPVYGSH 171
+YP Y ++
Sbjct: 378 SYPGYANY 385
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 47 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFAN 100
PQ T+++G L + + L + GE+ASVK+ K G GF++F +
Sbjct: 52 PQPTSADEVRTLWIGDLQYWMDENYLYTCLAHTGEVASVKVIRNKQTSQSEGYGFIEFTS 111
Query: 101 RENAEEALHKLNGTVI--GKQSFRADY 125
R AE L NGT++ G Q+FR ++
Sbjct: 112 RAGAERVLQTYNGTIMPNGGQNFRLNW 138
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQF 98
G + DS + TIFVG L +VTD L++ F ++Y I K+ + KG GFV+F
Sbjct: 144 GERRHDDSPDHTIFVGDLAADVTDYLLQETFRARYPSIKGAKVVIDRLTGRTKGYGFVRF 203
Query: 99 ANRENAEEALHKLNGTVIGKQSFR 122
+ A+ ++ G + + R
Sbjct: 204 GDESEQVRAMTEMQGVLCSTRPMR 227
>gi|356563290|ref|XP_003549897.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 402
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 109/189 (57%), Gaps = 33/189 (17%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M+EM GV CS+RPMRIG A+ + S Q +S QG Q+E D +NTTIFV
Sbjct: 217 MSEMQGVLCSTRPMRIGPASNKNPSTQSQPKASYQN-------PQGAQNEHDPNNTTIFV 269
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G LDPNVTD+ LRQ F QYGE+ VKIP GK CGFVQFA+R AEEAL LNGT++G Q+
Sbjct: 270 GNLDPNVTDDHLRQVFGQYGELVHVKIPAGKRCGFVQFADRSCAEEALRVLNGTLLGGQN 329
Query: 121 FRADYG------------NQWS------GAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAY 162
R +G NQW+ Y Y+ YGYA P DP+M Y
Sbjct: 330 VRLSWGRSPSNKQAQPDANQWNGSGGGGYYGYAQGGYENYGYA-PAGQDPNM-------Y 381
Query: 163 GAYPVYGSH 171
G+YP Y ++
Sbjct: 382 GSYPGYANY 390
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 8/87 (9%)
Query: 47 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFAN 100
PQ T+++G L + + L F+ GE+ASVK+ K G GF++F +
Sbjct: 56 PQPTSADEVRTLWIGDLQYWMDENYLYTCFAHTGELASVKVIRNKQTSQSEGYGFIEFTS 115
Query: 101 RENAEEALHKLNGTVI--GKQSFRADY 125
R AE L NGT++ G Q+FR ++
Sbjct: 116 RAGAERVLQTYNGTIMPNGGQNFRLNW 142
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQF 98
G + DS + TIFVG L +VTD L++ F ++Y K+ + KG GFV+F
Sbjct: 148 GERRHDDSPDHTIFVGDLAADVTDYLLQETFRARYPSAKGAKVVIDRLTGRTKGYGFVRF 207
Query: 99 ANRENAEEALHKLNGTVIGKQSFR 122
+ A+ ++ G + + R
Sbjct: 208 GDESEQVRAMSEMQGVLCSTRPMR 231
>gi|356541997|ref|XP_003539458.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Glycine max]
Length = 392
Score = 141 bits (356), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 78/168 (46%), Positives = 108/168 (64%), Gaps = 17/168 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYS---SQGGYASNGAPGQGPQSEGDSSNTT 57
MTEMNGVYCS+RPMRI AATP+K++ +Q QY+ + + + AP E D +NTT
Sbjct: 156 MTEMNGVYCSTRPMRISAATPKKNASFQHQYAPPKAMYQFPAYTAPVSTVAPENDVNNTT 215
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIG 117
+ +G LD NVT+E+L+Q F Q+G+I VKI GKG G+VQF R +AE+A+ ++ G VIG
Sbjct: 216 VCIGNLDLNVTEEELKQAFVQFGDIVLVKIYAGKGYGYVQFGTRASAEDAIQRMQGKVIG 275
Query: 118 KQSFRADYG----------NQWSGAYYG-GQVYDGYGYAIPPPNDPSM 154
+Q + +G +QWS AYYG GQ Y+ Y Y +DPS+
Sbjct: 276 QQVIQISWGSTLTARQMDPSQWS-AYYGYGQGYESYAYG--ATHDPSL 320
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L V + L Q F+ GE+ S+KI K G GFV+F + +AE L
Sbjct: 11 TLWIGDLQYWVDESYLSQCFAHSGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAFLRT 70
Query: 111 LNGTVI--GKQSFRADYGN 127
NG + Q+FR ++ +
Sbjct: 71 FNGAQMPGTDQTFRLNWAS 89
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 49 SEGDSS-NTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFAN 100
S GDS + +IFVG L P+VTD L++ F + Y + K+ KG GFV+FA+
Sbjct: 89 SFGDSGPDHSIFVGDLAPDVTDFILQETFRAHYPSVKGSKVVTDPATGRSKGYGFVKFAD 148
Query: 101 RENAEEALHKLNGTVIGKQSFR 122
A+ ++NG + R
Sbjct: 149 EAQRNRAMTEMNGVYCSTRPMR 170
>gi|242074396|ref|XP_002447134.1| hypothetical protein SORBIDRAFT_06g029180 [Sorghum bicolor]
gi|241938317|gb|EES11462.1| hypothetical protein SORBIDRAFT_06g029180 [Sorghum bicolor]
Length = 440
Score = 141 bits (356), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 74/131 (56%), Positives = 87/131 (66%), Gaps = 10/131 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG-QGPQSEGDSSNTTIF 59
MTEMNG+ CSSRPMRIG A RK++G G P QG QSE D +NTTIF
Sbjct: 241 MTEMNGMPCSSRPMRIGPAASRKNTG---------GVVQERVPNSQGAQSENDPNNTTIF 291
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQ 119
VGGLDPNVT++ L+Q FS YGE+ VKIPVGK CGFVQF R +AE+AL L G +IG Q
Sbjct: 292 VGGLDPNVTEDTLKQVFSPYGEVVHVKIPVGKRCGFVQFVTRPSAEQALLMLQGALIGAQ 351
Query: 120 SFRADYGNQWS 130
+ R +G S
Sbjct: 352 NVRLSWGRSLS 362
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQY------GEIASVKIPV-GKGCGFVQFAN 100
+ D+ + TIFVG L +VTD L++ F + ++ + K+ + KG GFV+F +
Sbjct: 174 EKRDDTPDYTIFVGDLAADVTDYLLQETFRVHYPSVKGAKVVTDKLTMRTKGYGFVKFGD 233
Query: 101 RENAEEALHKLNGTVIGKQSFR 122
A+ ++NG + R
Sbjct: 234 PTEQARAMTEMNGMPCSSRPMR 255
>gi|293336608|ref|NP_001168401.1| uncharacterized protein LOC100382170 [Zea mays]
gi|223948043|gb|ACN28105.1| unknown [Zea mays]
gi|414585352|tpg|DAA35923.1| TPA: hypothetical protein ZEAMMB73_028165 [Zea mays]
Length = 432
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/131 (56%), Positives = 87/131 (66%), Gaps = 10/131 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG-QGPQSEGDSSNTTIF 59
MTEMNG+ CSSRPMRIG A RK++G G P QG QSE D +NTTIF
Sbjct: 241 MTEMNGMPCSSRPMRIGPAASRKNTG---------GVVQERVPNSQGAQSENDPNNTTIF 291
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQ 119
VGGLDPNVT++ L+Q FS YGE+ VKIPVGK CGFVQF R +AE+AL L G +IG Q
Sbjct: 292 VGGLDPNVTEDTLKQVFSPYGEVVHVKIPVGKRCGFVQFVTRPSAEQALLMLQGALIGAQ 351
Query: 120 SFRADYGNQWS 130
+ R +G S
Sbjct: 352 NVRLSWGRSLS 362
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQY------GEIASVKIPV-GKGCGFVQFAN 100
+ D+ TIFVG L +VTD L++ F + ++ + K+ + KG GFV+F +
Sbjct: 174 EKRDDTPEYTIFVGDLAADVTDYLLQETFRVHYPSVKGAKVVTDKLTMRTKGYGFVKFGD 233
Query: 101 RENAEEALHKLNGTVIGKQSFR 122
A+ ++NG + R
Sbjct: 234 PTEQARAMTEMNGMPCSSRPMR 255
>gi|75334880|sp|Q9LEB4.1|RBP45_NICPL RecName: Full=Polyadenylate-binding protein RBP45;
Short=Poly(A)-binding protein RBP45; AltName:
Full=RNA-binding protein 45; Short=NplRBP45
gi|9663767|emb|CAC01237.1| RNA Binding Protein 45 [Nicotiana plumbaginifolia]
Length = 409
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/186 (47%), Positives = 104/186 (55%), Gaps = 27/186 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGV CS+RPMRIG A +K G Q+ + Q A+ G E D +NTTIFV
Sbjct: 235 MTEMNGVLCSTRPMRIGPAANKKPVGTPQKATYQNPQATQG--------ESDPNNTTIFV 286
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDP V +E LRQ FS YGE+ VKI GK CGFVQF R +AE+AL LNGT +G QS
Sbjct: 287 GGLDPTVAEEHLRQVFSPYGELVHVKIVAGKRCGFVQFGTRASAEQALSSLNGTQLGGQS 346
Query: 121 FRADYG----------NQWSGAYYGGQVYDGYGYAI---PPPNDPSMYAAAAAAYGAYPV 167
R +G QW G+ Y A PP DP+MY YG YP
Sbjct: 347 IRLSWGRSPSSKQTDQTQWGGSGGAYYGYGQGYEAYGYAPPAQDPNMY------YGNYPG 400
Query: 168 YGSHQQ 173
Y ++QQ
Sbjct: 401 YANYQQ 406
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFAN 100
+ DS+ TIFVG L +VTD L++ F S Y + K+ KG GFV+FA+
Sbjct: 168 ERRDDSAEHTIFVGDLAADVTDYILQETFKSVYSSVRGAKVVTDRITGRSKGYGFVKFAD 227
Query: 101 RENAEEALHKLNGTVIGKQSFR 122
A+ ++NG + + R
Sbjct: 228 ESEQLRAMTEMNGVLCSTRPMR 249
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 13/108 (12%)
Query: 28 QQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
QQQY + N +P P + ++++G L + + L F GE+ S K+
Sbjct: 61 QQQYGAMATTNPNPSPTGNP-----NEVRSLWIGDLQYWMDENYLSTCFYHTGELVSAKV 115
Query: 88 PVGK------GCGFVQFANRENAEEALHKLNGTVIG--KQSFRADYGN 127
K G GF++F + AE L NGT++ +Q+FR ++ +
Sbjct: 116 IRNKQTGQSEGYGFLEFRSHAAAETILQTYNGTLMPNVEQNFRMNWAS 163
>gi|223948225|gb|ACN28196.1| unknown [Zea mays]
gi|414590425|tpg|DAA40996.1| TPA: hypothetical protein ZEAMMB73_114709 [Zea mays]
Length = 503
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/171 (47%), Positives = 103/171 (60%), Gaps = 21/171 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+ S+R MRIGAA +K++ QQ Y++ G Y S+ QG SE D +NTT+FV
Sbjct: 300 MTEMNGMMLSTRKMRIGAAASKKNTDAQQTYATNGAYQSS----QGNCSENDPNNTTVFV 355
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLD NV +E LRQ F+ YGEI+ VKIPVGK CGFVQF +R AEEA+ LNG+ IG Q
Sbjct: 356 GGLDSNVDEEYLRQIFTPYGEISYVKIPVGKHCGFVQFTSRSCAEEAIQMLNGSQIGGQK 415
Query: 121 FRADYGNQW---------SGAYYGGQVY--------DGYGYAIPPPNDPSM 154
R +G + + Y G Y +GY Y P DPS+
Sbjct: 416 ARLSWGRSTQNRQASQHDANSQYNGNNYYRYQQPGNEGYSYGAPNAQDPSI 466
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 37 YASNGAPGQGPQSEGDS-SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG---- 90
+ N A GD+ S+ IFVG L P+VTD L F + Y + K+ V
Sbjct: 221 FKLNWASASTGDKRGDNGSDHAIFVGDLAPDVTDSMLEDVFRANYPSVRGAKVVVDRITG 280
Query: 91 --KGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
KG GFV F + A+ ++NG ++ + R
Sbjct: 281 RPKGYGFVHFGDLNEQARAMTEMNGMMLSTRKMR 314
>gi|212276053|ref|NP_001130512.1| uncharacterized protein LOC100191611 [Zea mays]
gi|194689348|gb|ACF78758.1| unknown [Zea mays]
gi|414590424|tpg|DAA40995.1| TPA: hypothetical protein ZEAMMB73_114709 [Zea mays]
Length = 472
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/171 (47%), Positives = 103/171 (60%), Gaps = 21/171 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+ S+R MRIGAA +K++ QQ Y++ G Y S+ QG SE D +NTT+FV
Sbjct: 269 MTEMNGMMLSTRKMRIGAAASKKNTDAQQTYATNGAYQSS----QGNCSENDPNNTTVFV 324
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLD NV +E LRQ F+ YGEI+ VKIPVGK CGFVQF +R AEEA+ LNG+ IG Q
Sbjct: 325 GGLDSNVDEEYLRQIFTPYGEISYVKIPVGKHCGFVQFTSRSCAEEAIQMLNGSQIGGQK 384
Query: 121 FRADYGNQW---------SGAYYGGQVY--------DGYGYAIPPPNDPSM 154
R +G + + Y G Y +GY Y P DPS+
Sbjct: 385 ARLSWGRSTQNRQASQHDANSQYNGNNYYRYQQPGNEGYSYGAPNAQDPSI 435
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 37 YASNGAPGQGPQSEGDS-SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG---- 90
+ N A GD+ S+ IFVG L P+VTD L F + Y + K+ V
Sbjct: 190 FKLNWASASTGDKRGDNGSDHAIFVGDLAPDVTDSMLEDVFRANYPSVRGAKVVVDRITG 249
Query: 91 --KGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
KG GFV F + A+ ++NG ++ + R
Sbjct: 250 RPKGYGFVHFGDLNEQARAMTEMNGMMLSTRKMR 283
>gi|212722596|ref|NP_001131852.1| uncharacterized protein LOC100193230 [Zea mays]
gi|194692726|gb|ACF80447.1| unknown [Zea mays]
gi|413919585|gb|AFW59517.1| hypothetical protein ZEAMMB73_768040 [Zea mays]
Length = 434
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/131 (56%), Positives = 87/131 (66%), Gaps = 10/131 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG-QGPQSEGDSSNTTIF 59
MTEMNG+ CSSRPMRIG A RK++G G P QG QSE D +NTTIF
Sbjct: 235 MTEMNGMPCSSRPMRIGPAASRKNAG---------GVVQERVPNSQGAQSENDPNNTTIF 285
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQ 119
VGGLDPNVT++ L+Q FS YGE+ VKIPVGK CGFVQF R +AE+AL L G +IG Q
Sbjct: 286 VGGLDPNVTEDVLKQAFSPYGEVIHVKIPVGKRCGFVQFVTRPSAEQALLMLQGALIGAQ 345
Query: 120 SFRADYGNQWS 130
+ R +G S
Sbjct: 346 NVRLSWGRSLS 356
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPVG------KGCGFVQFAN 100
+ D+ + TIFVG L +VTD L++ F Y + K+ KG GFV+F +
Sbjct: 168 EKRDDTPDYTIFVGDLAADVTDYLLQETFRVHYPSVKGAKVVTDKLTMRTKGYGFVKFGD 227
Query: 101 RENAEEALHKLNGTVIGKQSFR 122
A+ ++NG + R
Sbjct: 228 PTEQARAMTEMNGMPCSSRPMR 249
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + D + FS GE+ +VK+ K G GFV+F +R AE L
Sbjct: 87 TLWIGDLQYWMDDNYVFGCFSNTGEVQNVKLIRDKNSGQLQGYGFVEFTSRAAAERVLQT 146
Query: 111 LNGTVIGK--QSFRADY 125
NG ++ +FR ++
Sbjct: 147 YNGQMMPNVDLTFRLNW 163
>gi|15239715|ref|NP_197436.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75331115|sp|Q8VXZ9.1|R47BP_ARATH RecName: Full=Polyadenylate-binding protein RBP47B';
Short=Poly(A)-binding protein RBP47B'; AltName:
Full=RNA-binding protein 47B'; Short=AtRBP47B prime;
Short=AtRBP47B'
gi|18377731|gb|AAL67015.1| putative DNA binding protein ACBF [Arabidopsis thaliana]
gi|21281189|gb|AAM45052.1| putative DNA binding protein ACBF [Arabidopsis thaliana]
gi|332005306|gb|AED92689.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 425
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/197 (44%), Positives = 113/197 (57%), Gaps = 23/197 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY-----ASNGAPGQG--PQSEGDS 53
M EMNG+YCS+RPMRI AATP+K+ G QQQY ++ Y ++ AP Q E D
Sbjct: 175 MAEMNGLYCSTRPMRISAATPKKNVGVQQQYVTKAVYPVTVPSAVAAPVQAYVAPPESDV 234
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 113
+ TTI V LD NVT+E+L++ FSQ GE+ VKIP KG G+VQF R +AEEA+ ++ G
Sbjct: 235 TCTTISVANLDQNVTEEELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQG 294
Query: 114 TVIGKQSFRADYG--------------NQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAA 159
VIG+Q+ R + NQW+G Y GQ YD Y Y DPS+YA
Sbjct: 295 QVIGQQAVRISWSKNPGQDGWVTQADPNQWNGYYGYGQGYDAYAYGA--TQDPSVYAYGG 352
Query: 160 AAYGAYPVYGSHQQQVS 176
Y YP G Q +S
Sbjct: 353 YGYPQYPQQGEGTQDIS 369
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L V + L FSQ GE+ SVK+ K G GF++F + AE L
Sbjct: 25 TLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERTLQT 84
Query: 111 LNGTVI--GKQSFRADYGNQWSG 131
NGT + + +FR ++ + SG
Sbjct: 85 YNGTQMPGTELTFRLNWASFGSG 107
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEALH 109
+IFVG L P+VTD L++ F Y + K+ KG GFV+FA A+
Sbjct: 117 SIFVGDLAPDVTDYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMA 176
Query: 110 KLNGTVIGKQSFR 122
++NG + R
Sbjct: 177 EMNGLYCSTRPMR 189
>gi|413919584|gb|AFW59516.1| hypothetical protein ZEAMMB73_768040, partial [Zea mays]
Length = 428
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 74/131 (56%), Positives = 87/131 (66%), Gaps = 10/131 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG-QGPQSEGDSSNTTIF 59
MTEMNG+ CSSRPMRIG A RK++G G P QG QSE D +NTTIF
Sbjct: 235 MTEMNGMPCSSRPMRIGPAASRKNAG---------GVVQERVPNSQGAQSENDPNNTTIF 285
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQ 119
VGGLDPNVT++ L+Q FS YGE+ VKIPVGK CGFVQF R +AE+AL L G +IG Q
Sbjct: 286 VGGLDPNVTEDVLKQAFSPYGEVIHVKIPVGKRCGFVQFVTRPSAEQALLMLQGALIGAQ 345
Query: 120 SFRADYGNQWS 130
+ R +G S
Sbjct: 346 NVRLSWGRSLS 356
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPVG------KGCGFVQFAN 100
+ D+ + TIFVG L +VTD L++ F Y + K+ KG GFV+F +
Sbjct: 168 EKRDDTPDYTIFVGDLAADVTDYLLQETFRVHYPSVKGAKVVTDKLTMRTKGYGFVKFGD 227
Query: 101 RENAEEALHKLNGTVIGKQSFR 122
A+ ++NG + R
Sbjct: 228 PTEQARAMTEMNGMPCSSRPMR 249
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + D + FS GE+ +VK+ K G GFV+F +R AE L
Sbjct: 87 TLWIGDLQYWMDDNYVFGCFSNTGEVQNVKLIRDKNSGQLQGYGFVEFTSRAAAERVLQT 146
Query: 111 LNGTVIGK--QSFRADY 125
NG ++ +FR ++
Sbjct: 147 YNGQMMPNVDLTFRLNW 163
>gi|357454295|ref|XP_003597428.1| RNA-binding protein [Medicago truncatula]
gi|355486476|gb|AES67679.1| RNA-binding protein [Medicago truncatula]
Length = 428
Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/186 (43%), Positives = 104/186 (55%), Gaps = 34/186 (18%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY------------ASNGAPGQGPQ 48
M+EMNGVYCS+RPMRI AATP+K++GYQQ + A AP
Sbjct: 167 MSEMNGVYCSTRPMRISAATPKKTTGYQQNPYAAVVAAAPVPKAIYPVPAYTTAPVNTVP 226
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
E D +NTTI+VG LD NV++E+L+Q F Q+GEI SVK+ GK CGFVQF R +AEEA+
Sbjct: 227 PEYDVNNTTIYVGNLDLNVSEEELKQNFLQFGEIVSVKVHPGKACGFVQFGARASAEEAI 286
Query: 109 HKLNGTVIGKQSFRADYG-------------------NQWSGAY-YGGQVYDGYGYAIPP 148
K+ G ++G+Q R +G +QWS Y YG Y+ Y Y
Sbjct: 287 QKMQGKILGQQVIRVSWGRPQTARQDVPGGWGQQVDQSQWSAYYGYGQPGYEAYAYG--A 344
Query: 149 PNDPSM 154
DPSM
Sbjct: 345 AQDPSM 350
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L V + L FS GE+ S+KI K G GF++F + AE L
Sbjct: 16 TLWIGDLQYWVDENYLTHCFSHTGEVISIKIIRNKITGQPEGYGFIEFVSHSAAERVLQT 75
Query: 111 LNGTVI--GKQSFRADYGN 127
NGT + +Q+FR ++ +
Sbjct: 76 YNGTQMPGTEQTFRLNWAS 94
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 10/93 (10%)
Query: 37 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------ 89
+AS G + P + D S IFVG L P+VTD L++ F + YG + K+
Sbjct: 92 WASFGIGERRPDAGPDHS---IFVGDLAPDVTDYLLQETFRTHYGSVRGAKVVTDPNTGR 148
Query: 90 GKGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
KG GFV+F++ A+ ++NG + R
Sbjct: 149 SKGYGFVKFSDESERNRAMSEMNGVYCSTRPMR 181
>gi|145334517|ref|NP_001078604.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332005307|gb|AED92690.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 421
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 88/193 (45%), Positives = 111/193 (57%), Gaps = 19/193 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASN-GAPGQG--PQSEGDSSNTT 57
M EMNG+YCS+RPMRI AATP+K+ G QQQY ++ S AP Q E D + TT
Sbjct: 175 MAEMNGLYCSTRPMRISAATPKKNVGVQQQYVTKVTVPSAVAAPVQAYVAPPESDVTCTT 234
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIG 117
I V LD NVT+E+L++ FSQ GE+ VKIP KG G+VQF R +AEEA+ ++ G VIG
Sbjct: 235 ISVANLDQNVTEEELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIG 294
Query: 118 KQSFRADYG--------------NQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYG 163
+Q+ R + NQW+G Y GQ YD Y Y DPS+YA Y
Sbjct: 295 QQAVRISWSKNPGQDGWVTQADPNQWNGYYGYGQGYDAYAYGA--TQDPSVYAYGGYGYP 352
Query: 164 AYPVYGSHQQQVS 176
YP G Q +S
Sbjct: 353 QYPQQGEGTQDIS 365
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L V + L FSQ GE+ SVK+ K G GF++F + AE L
Sbjct: 25 TLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERTLQT 84
Query: 111 LNGTVI--GKQSFRADYGNQWSG 131
NGT + + +FR ++ + SG
Sbjct: 85 YNGTQMPGTELTFRLNWASFGSG 107
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEALH 109
+IFVG L P+VTD L++ F Y + K+ KG GFV+FA A+
Sbjct: 117 SIFVGDLAPDVTDYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMA 176
Query: 110 KLNGTVIGKQSFR 122
++NG + R
Sbjct: 177 EMNGLYCSTRPMR 189
>gi|115451047|ref|NP_001049124.1| Os03g0174100 [Oryza sativa Japonica Group]
gi|113547595|dbj|BAF11038.1| Os03g0174100, partial [Oryza sativa Japonica Group]
Length = 438
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/130 (52%), Positives = 93/130 (71%), Gaps = 4/130 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQY-SSQGGYASNG--APGQGP-QSEGDSSNT 56
MTEMNG+YCS+RPMRI AA P+K++G Q QY +++ Y + G P P + D +NT
Sbjct: 190 MTEMNGMYCSTRPMRISAAIPKKTTGSQLQYGAAKAMYPAAGYAVPQVQPVLPDSDPTNT 249
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
TIF+G LD NVT+++LRQ Q+GE+ VKIP K CGFVQ+A+R +AEEA+ +L+GT I
Sbjct: 250 TIFIGNLDQNVTEDELRQICVQFGELIYVKIPANKACGFVQYASRASAEEAVQRLHGTTI 309
Query: 117 GKQSFRADYG 126
G+Q R +G
Sbjct: 310 GQQVVRLSWG 319
Score = 43.1 bits (100), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 19/116 (16%)
Query: 57 TIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEALH 109
+IFVG L P+VTD L++ F Y + K+ KG GFV+FA+ A+
Sbjct: 132 SIFVGDLAPDVTDYLLQETFRVSYPSVKGAKVVTDPNTGRSKGYGFVKFADENEKNRAMT 191
Query: 110 KLNGTVIGKQSFR--ADYGNQWSGA--YYGG--QVYDGYGYAIP------PPNDPS 153
++NG + R A + +G+ YG +Y GYA+P P +DP+
Sbjct: 192 EMNGMYCSTRPMRISAAIPKKTTGSQLQYGAAKAMYPAAGYAVPQVQPVLPDSDPT 247
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 10/108 (9%)
Query: 32 SSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK 91
+++ G + AP P S + T+++G L + L F+ GE+ SVKI K
Sbjct: 16 AARSGLSMAAAPYHQPTSLEEVR--TLWIGDLQYWADENYLYNCFAHTGELQSVKIIRNK 73
Query: 92 ------GCGFVQFANRENAEEALHKLNGTVI--GKQSFRADYGNQWSG 131
G GF++F + E AE+ L NGT + + +FR ++ + SG
Sbjct: 74 LTSLPEGYGFIEFISHEVAEKVLQTYNGTQMPGTEHTFRLNWASFSSG 121
>gi|108706453|gb|ABF94248.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|215694482|dbj|BAG89475.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 416
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/130 (52%), Positives = 93/130 (71%), Gaps = 4/130 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQY-SSQGGYASNG--APGQGP-QSEGDSSNT 56
MTEMNG+YCS+RPMRI AA P+K++G Q QY +++ Y + G P P + D +NT
Sbjct: 168 MTEMNGMYCSTRPMRISAAIPKKTTGSQLQYGAAKAMYPAAGYAVPQVQPVLPDSDPTNT 227
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
TIF+G LD NVT+++LRQ Q+GE+ VKIP K CGFVQ+A+R +AEEA+ +L+GT I
Sbjct: 228 TIFIGNLDQNVTEDELRQICVQFGELIYVKIPANKACGFVQYASRASAEEAVQRLHGTTI 287
Query: 117 GKQSFRADYG 126
G+Q R +G
Sbjct: 288 GQQVVRLSWG 297
Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 19/116 (16%)
Query: 57 TIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEALH 109
+IFVG L P+VTD L++ F Y + K+ KG GFV+FA+ A+
Sbjct: 110 SIFVGDLAPDVTDYLLQETFRVSYPSVKGAKVVTDPNTGRSKGYGFVKFADENEKNRAMT 169
Query: 110 KLNGTVIGKQSFR--ADYGNQWSGA--YYGG--QVYDGYGYAIP------PPNDPS 153
++NG + R A + +G+ YG +Y GYA+P P +DP+
Sbjct: 170 EMNGMYCSTRPMRISAAIPKKTTGSQLQYGAAKAMYPAAGYAVPQVQPVLPDSDPT 225
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + L F+ GE+ SVKI K G GF++F + E AE+ L
Sbjct: 17 TLWIGDLQYWADENYLYNCFAHTGELQSVKIIRNKLTSLPEGYGFIEFISHEVAEKVLQT 76
Query: 111 LNGTVI--GKQSFRADYGNQWSG 131
NGT + + +FR ++ + SG
Sbjct: 77 YNGTQMPGTEHTFRLNWASFSSG 99
>gi|218192181|gb|EEC74608.1| hypothetical protein OsI_10216 [Oryza sativa Indica Group]
Length = 416
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/130 (52%), Positives = 93/130 (71%), Gaps = 4/130 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQY-SSQGGYASNG--APGQGP-QSEGDSSNT 56
MTEMNG+YCS+RPMRI AA P+K++G Q QY +++ Y + G P P + D +NT
Sbjct: 168 MTEMNGMYCSTRPMRISAAIPKKTTGSQLQYGAAKAMYPAAGYAVPQVQPVLPDSDPTNT 227
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
TIF+G LD NVT+++LRQ Q+GE+ VKIP K CGFVQ+A+R +AEEA+ +L+GT I
Sbjct: 228 TIFIGNLDQNVTEDELRQICVQFGELIYVKIPANKACGFVQYASRASAEEAVQRLHGTTI 287
Query: 117 GKQSFRADYG 126
G+Q R +G
Sbjct: 288 GQQVVRLSWG 297
Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 19/116 (16%)
Query: 57 TIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEALH 109
+IFVG L P+VTD L++ F Y + K+ KG GFV+FA+ A+
Sbjct: 110 SIFVGDLAPDVTDYLLQETFRVSYPSVKGAKVVTDPNTGRSKGYGFVKFADENEKNRAMT 169
Query: 110 KLNGTVIGKQSFR--ADYGNQWSGA--YYGG--QVYDGYGYAIP------PPNDPS 153
++NG + R A + +G+ YG +Y GYA+P P +DP+
Sbjct: 170 EMNGMYCSTRPMRISAAIPKKTTGSQLQYGAAKAMYPAAGYAVPQVQPVLPDSDPT 225
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + L F+ GE+ SVKI K G GF++F + E AE+ L
Sbjct: 17 TLWIGDLQYWADENYLYNCFAHTGELQSVKIIRNKLTSLPEGYGFIEFISHEVAEKVLQT 76
Query: 111 LNGTVI--GKQSFRADYGNQWSG 131
NGT + + +FR ++ + SG
Sbjct: 77 YNGTQMPGTEHTFRLNWASFSSG 99
>gi|356541995|ref|XP_003539457.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Glycine max]
Length = 401
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/177 (44%), Positives = 108/177 (61%), Gaps = 26/177 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYS---SQGGYASNGAPGQGPQSEGDSSNTT 57
MTEMNGVYCS+RPMRI AATP+K++ +Q QY+ + + + AP E D +NTT
Sbjct: 156 MTEMNGVYCSTRPMRISAATPKKNASFQHQYAPPKAMYQFPAYTAPVSTVAPENDVNNTT 215
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIG 117
+ +G LD NVT+E+L+Q F Q+G+I VKI GKG G+VQF R +AE+A+ ++ G VIG
Sbjct: 216 VCIGNLDLNVTEEELKQAFVQFGDIVLVKIYAGKGYGYVQFGTRASAEDAIQRMQGKVIG 275
Query: 118 KQSFRADYG-------------------NQWSGAYYG-GQVYDGYGYAIPPPNDPSM 154
+Q + +G +QWS AYYG GQ Y+ Y Y +DPS+
Sbjct: 276 QQVIQISWGSTLTARQDVPGGWGAQMDPSQWS-AYYGYGQGYESYAYG--ATHDPSL 329
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L V + L Q F+ GE+ S+KI K G GFV+F + +AE L
Sbjct: 11 TLWIGDLQYWVDESYLSQCFAHSGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAFLRT 70
Query: 111 LNGTVI--GKQSFRADYGN 127
NG + Q+FR ++ +
Sbjct: 71 FNGAQMPGTDQTFRLNWAS 89
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 49 SEGDSS-NTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFAN 100
S GDS + +IFVG L P+VTD L++ F + Y + K+ KG GFV+FA+
Sbjct: 89 SFGDSGPDHSIFVGDLAPDVTDFILQETFRAHYPSVKGSKVVTDPATGRSKGYGFVKFAD 148
Query: 101 RENAEEALHKLNGTVIGKQSFR 122
A+ ++NG + R
Sbjct: 149 EAQRNRAMTEMNGVYCSTRPMR 170
>gi|125586871|gb|EAZ27535.1| hypothetical protein OsJ_11490 [Oryza sativa Japonica Group]
Length = 171
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/141 (53%), Positives = 94/141 (66%), Gaps = 20/141 (14%)
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 104
QG S+ D +NTT+FVGGLDP+VTDE L+Q FS YGE+ VKIPVGK CGFVQ++NR +A
Sbjct: 22 QGTDSDSDPNNTTVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGKRCGFVQYSNRASA 81
Query: 105 EEALHKLNGTVIGKQSFRADYG------------NQWSGAYYG--GQVYDGYGYAIPPPN 150
EEA+ LNG+ +G QS R +G NQW+ YYG Q YD YGY + PP
Sbjct: 82 EEAIRMLNGSQLGGQSIRLSWGRSPGNKQPQQDQNQWNAGYYGYPPQGYDPYGY-VRPPQ 140
Query: 151 DPSMYAAAAAAYGAYPVYGSH 171
DP+MY AY AYP YG++
Sbjct: 141 DPAMY-----AYAAYPGYGNY 156
>gi|149392334|gb|ABR25993.1| nucleic acid binding protein [Oryza sativa Indica Group]
Length = 128
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/129 (56%), Positives = 94/129 (72%), Gaps = 17/129 (13%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
T++VGGLDPNV++++LR+ F++YG++ASVKIP+GK CGFVQF +R +AEEAL LNG+VI
Sbjct: 1 TVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSVI 60
Query: 117 GKQSF-------------RADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYG 163
GKQ+ RAD G++ + YYG Y GYGYA P P+ P+MY AAAYG
Sbjct: 61 GKQAVRLSWGRSPSHKQSRADSGSRRNNMYYGTPFYGGYGYASPVPH-PNMY---AAAYG 116
Query: 164 AYPVYGSHQ 172
AYPVYGS Q
Sbjct: 117 AYPVYGSQQ 125
>gi|302795494|ref|XP_002979510.1| hypothetical protein SELMODRAFT_111082 [Selaginella moellendorffii]
gi|300152758|gb|EFJ19399.1| hypothetical protein SELMODRAFT_111082 [Selaginella moellendorffii]
Length = 432
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/140 (50%), Positives = 91/140 (65%), Gaps = 13/140 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK------SSGYQQQYSSQGGYASNGAP-------GQGP 47
M+EMNGVYCSSRPMRI AATP+K ++ Q AS P Q
Sbjct: 180 MSEMNGVYCSSRPMRISAATPKKAMAAGLTTVTAATIVPQPTIASPITPPPSLSIQSQVL 239
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ D +NTTIFVGGLD N+T+E+++Q FS GE+ SVKIP GKGC FVQ+A R +AE+A
Sbjct: 240 PPDSDPTNTTIFVGGLDLNITEEEVKQTFSHIGELVSVKIPPGKGCAFVQYAQRNSAEDA 299
Query: 108 LHKLNGTVIGKQSFRADYGN 127
L +L+GTVIG+Q+ R +G
Sbjct: 300 LQRLHGTVIGQQAIRLSWGR 319
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 7/105 (6%)
Query: 25 SGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIA 83
+G Q + Q + + G G + +IFVG L P+VTD L + F +++ +
Sbjct: 90 NGTQMPQTEQAFRLNWASFGMGEKRMDGGPELSIFVGDLAPDVTDYMLHETFRTRFPSVR 149
Query: 84 SVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
K+ + KG GFV+FA+ A+ ++NG + R
Sbjct: 150 GAKVVIDAVTGRSKGYGFVRFADENERARAMSEMNGVYCSSRPMR 194
Score = 39.3 bits (90), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + + LR F+ GE+ S K+ K G GF++F + AE L
Sbjct: 29 TLWIGDLQYWMDENYLRNLFAHTGEVLSAKVIRNKQTGYPEGYGFIEFNSHPAAERVLLA 88
Query: 111 LNGTVI--GKQSFRADYGN 127
NGT + +Q+FR ++ +
Sbjct: 89 YNGTQMPQTEQAFRLNWAS 107
>gi|297737425|emb|CBI26626.3| unnamed protein product [Vitis vinifera]
Length = 224
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/142 (58%), Positives = 94/142 (66%), Gaps = 20/142 (14%)
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 104
QG Q E D +NTTIFVGGLD NVTD+ LRQ FSQYGE+ VKIPVGK CGFVQFANR A
Sbjct: 41 QGNQGESDPNNTTIFVGGLDSNVTDDYLRQVFSQYGELVHVKIPVGKRCGFVQFANRACA 100
Query: 105 EEALHKLNGTVIGKQSFRADYGN------------QWS-GAYYGGQVYDGYGYAIPPPND 151
E+AL LNGT +G QS R +G QW+ G Y Q Y+ YGYA PPP D
Sbjct: 101 EQALAGLNGTQLGAQSIRLSWGRSPSNKQAQPDQAQWNGGYYGYAQGYEAYGYA-PPPQD 159
Query: 152 PSMYAAAAAAYGAYPVYGSHQQ 173
P+MY YGAYP YG++QQ
Sbjct: 160 PNMY------YGAYPGYGNYQQ 175
>gi|326495314|dbj|BAJ85753.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 385
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/144 (50%), Positives = 95/144 (65%), Gaps = 22/144 (15%)
Query: 1 MTEMNGVYCSSRPMRIG-AATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIF 59
MTEMNG+ CSSRPMRIG AA +K++G Q++ + QG Q++ D SN+TIF
Sbjct: 232 MTEMNGMICSSRPMRIGPAANKQKANGVQEKVPT----------AQGIQTDNDPSNSTIF 281
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQ 119
VGGLDP+ T++ L+Q F+ YGE+ VKIPVGK CGFVQ+A+R +AEEAL L GT+I Q
Sbjct: 282 VGGLDPSATEDVLKQVFTPYGEVVHVKIPVGKRCGFVQYASRSSAEEALLMLQGTMIEGQ 341
Query: 120 SFRADYG-----------NQWSGA 132
+ R +G NQW GA
Sbjct: 342 NVRLSWGRSPSNKQVQDFNQWGGA 365
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFAN 100
+ D ++ TIFVG L +VTD L++ F +QY + K+ KG GFV+F +
Sbjct: 165 EKHDDGADYTIFVGDLAADVTDYLLQETFRAQYPSVKGAKVVTDKLTMRSKGYGFVKFGD 224
Query: 101 RENAEEALHKLNGTVIGKQSFR 122
A+ ++NG + + R
Sbjct: 225 PTEQTRAMTEMNGMICSSRPMR 246
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 12/116 (10%)
Query: 37 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK----- 91
Y P Q P G + T+++G L + + + F+ GE+ SVK+ K
Sbjct: 66 YGWPSVPTQAP--AGPNEARTLWIGDLQYWMDENYVYNCFASTGEVQSVKLIRDKQTGQL 123
Query: 92 -GCGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAI 146
G GF++F +R AE L NG ++ + Y W+ A G + DG Y I
Sbjct: 124 QGYGFIEFTSRAGAERVLQTFNGAMM--PNVEMTYRLNWATA--GEKHDDGADYTI 175
>gi|297792959|ref|XP_002864364.1| hypothetical protein ARALYDRAFT_495572 [Arabidopsis lyrata subsp.
lyrata]
gi|297310199|gb|EFH40623.1| hypothetical protein ARALYDRAFT_495572 [Arabidopsis lyrata subsp.
lyrata]
Length = 398
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/175 (48%), Positives = 102/175 (58%), Gaps = 37/175 (21%)
Query: 1 MTEMNGVYCSSRPMRIGAA-----TPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSN 55
MTEMNG YCS+RPMRIG A P + + YQ ++QGG A + D +N
Sbjct: 217 MTEMNGQYCSTRPMRIGPAANKNALPMQPAMYQ---NTQGGNAG----------DSDPNN 263
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TTIFVGGLD NVTD++L+ F Q+GE+ VKIP GK CGFVQ+ANR AE AL LNGT
Sbjct: 264 TTIFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKRCGFVQYANRATAEHALSVLNGTQ 323
Query: 116 IGKQSFRADYGN---------QWSGAYY--------GGQVYDGYGYAIPPPNDPS 153
+G QS R +G QW+G Y GG Y+ YGYA P DP+
Sbjct: 324 LGGQSIRLSWGRSPNKQPDQAQWNGGGYYGYPPQPQGG--YEPYGYAAQPNQDPN 376
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Query: 37 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------ 89
+A GA + Q+EG + TIFVG L P VTD L F YG + K+ V
Sbjct: 141 WAQAGAGEKRHQTEG--PDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVVDRTTGR 198
Query: 90 GKGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
KG GFV+FA+ A+ ++NG + R
Sbjct: 199 SKGYGFVRFADENEQMRAMTEMNGQYCSTRPMR 231
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQ 97
G G Q+ G S ++++G L + + + F+Q GE S K+ K G GF++
Sbjct: 53 GVGSQNPG-SEVKSLWIGDLQQWMDENYIMSVFNQSGEAQSAKVIRNKLTGQSEGYGFIE 111
Query: 98 FANRENAEEALHKLNGTVI--GKQSFRADY 125
F N AE L NG + +Q+FR ++
Sbjct: 112 FINHSVAERVLQTYNGAQMPSTEQTFRLNW 141
>gi|224124344|ref|XP_002319308.1| predicted protein [Populus trichocarpa]
gi|222857684|gb|EEE95231.1| predicted protein [Populus trichocarpa]
Length = 344
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 73/126 (57%), Positives = 85/126 (67%), Gaps = 7/126 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M EMNG YCS+RPMRIG A +K QQY A+ +P QG Q E D +NTTIFV
Sbjct: 219 MVEMNGQYCSTRPMRIGPAATKKP--LTQQYQK----AAYQSP-QGNQGESDPNNTTIFV 271
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G LDP+VTD+ LR FS+YGE+ VKIP GK CGFVQFANR AE+AL LNGT I Q+
Sbjct: 272 GALDPSVTDDTLRAVFSKYGELVHVKIPAGKRCGFVQFANRTCAEQALSMLNGTQIAGQN 331
Query: 121 FRADYG 126
R +G
Sbjct: 332 IRLSWG 337
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFV 96
G G + + D + T+F+G L +V D L++ F Y + K+ KG GFV
Sbjct: 148 GAGERRQDDGPDYTVFIGDLAADVNDYLLQETFRNVYSSVKGAKVVTDRVTGRSKGYGFV 207
Query: 97 QFANRENAEEALHKLNGTVIGKQSFR 122
+FA+ A+ ++NG + R
Sbjct: 208 RFADENEQMRAMVEMNGQYCSTRPMR 233
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
++++G L + + + FS GE+ K+ K G GF++F + AE L
Sbjct: 68 SLWIGDLQQWMDENYILSIFSTTGEVVQAKVIRNKQTGYPEGYGFIEFVSHAAAERILQT 127
Query: 111 LNGTVI--GKQSFRADY 125
NGT + +Q+FR ++
Sbjct: 128 YNGTPMPNSEQTFRLNW 144
>gi|224115306|ref|XP_002316998.1| predicted protein [Populus trichocarpa]
gi|222860063|gb|EEE97610.1| predicted protein [Populus trichocarpa]
Length = 403
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 73/126 (57%), Positives = 85/126 (67%), Gaps = 7/126 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M EMNG YCS+RPMRIG A +K QQY A+ P QG Q E D +NTTIFV
Sbjct: 221 MVEMNGQYCSTRPMRIGPAATKKP--LTQQYQK----ATYQNP-QGNQGENDPNNTTIFV 273
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G LDP+VTD+ LR FS+YGE+ VKIP GK CGFVQFANR +AE+AL LNGT I Q+
Sbjct: 274 GALDPSVTDDTLRAVFSKYGELVHVKIPAGKRCGFVQFANRTSAEQALSMLNGTQIAGQN 333
Query: 121 FRADYG 126
R +G
Sbjct: 334 IRLSWG 339
Score = 38.9 bits (89), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
++++G L + + L FS GEI K+ K G GF++F +R AE L
Sbjct: 70 SLWIGDLQQWMDENYLLSIFSATGEIVQAKVIRNKQTGYPEGYGFIEFVSRAAAERILQT 129
Query: 111 LNGTVI--GKQSFRADYG 126
NGT + +Q+FR ++
Sbjct: 130 YNGTPMPNSEQAFRLNWA 147
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFV 96
G G + + D + T+FVG L +V D L++ F Y + K+ KG GF+
Sbjct: 150 GAGERRQDDGPDFTVFVGDLAADVNDYLLQETFRNVYPSVKGAKVVTDRVTGRSKGYGFI 209
Query: 97 QFANRENAEEALHKLNGTVIGKQSFR 122
+FA+ A+ ++NG + R
Sbjct: 210 RFADENEQRRAMVEMNGQYCSTRPMR 235
>gi|357116772|ref|XP_003560152.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 470
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 86/179 (48%), Positives = 106/179 (59%), Gaps = 17/179 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGV SSR +RIG A +K+ G QQ YS+ G Y S + QG + D +NTTIFV
Sbjct: 268 MTEMNGVTLSSRQLRIGPAANKKNMGTQQTYSTNG-YQSQSS--QGNDVQNDPNNTTIFV 324
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLD N+ + LRQ F+ YGE+ VKIPVGK CGFVQF +R AEEA++ LNGT IG +
Sbjct: 325 GGLDSNIDENYLRQVFTPYGEVGYVKIPVGKRCGFVQFTSRSCAEEAINALNGTPIGGNN 384
Query: 121 FRADYG-------------NQWSGA-YYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAY 165
R +G NQ +G+ YYG Q + Y P DPSM + YG Y
Sbjct: 385 VRLSWGRSTQNKQAPQQDANQGNGSNYYGYQQGNDAYYGAPNAQDPSMQNYGYSGYGNY 443
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENA 104
D S+ TIFVG L +VTD L++ F + Y + + KG GFV+F +
Sbjct: 205 DGSDHTIFVGDLASDVTDSMLQEIFKASYPSVRGANVVTDRATGRSKGYGFVRFGDVNEQ 264
Query: 105 EEALHKLNGTVIGKQSFR 122
A+ ++NG + + R
Sbjct: 265 TRAMTEMNGVTLSSRQLR 282
>gi|413918499|gb|AFW58431.1| hypothetical protein ZEAMMB73_000058 [Zea mays]
Length = 175
Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 76/142 (53%), Positives = 100/142 (70%), Gaps = 19/142 (13%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
S+GDSSN T++VGGLDPNV++++LR+ F++Y ++ASVKIP+GK CGFVQF +R +AEEA
Sbjct: 40 HSDGDSSNRTVYVGGLDPNVSEDELRKAFAKY-DLASVKIPLGKQCGFVQFVSRTDAEEA 98
Query: 108 LHKLNGTVIGKQSFRA-------------DYGNQWSGAYYGGQVYDGYGYAIPPPNDPSM 154
L LNG++IGKQ+ R D N+ + YYG Y GYGYA P P+ P+M
Sbjct: 99 LQGLNGSLIGKQAVRLSWVRSPSHKQSRGDSVNRRNNMYYGTPFYGGYGYASPVPH-PNM 157
Query: 155 YAAAAAAYGAYPVYGSHQQQVS 176
Y AAAYG YP+YG +QQ VS
Sbjct: 158 Y---AAAYGTYPLYG-NQQLVS 175
>gi|356557398|ref|XP_003547003.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 404
Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 82/182 (45%), Positives = 103/182 (56%), Gaps = 33/182 (18%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSG--------YQQQYSSQGGYASNGAPGQGPQSEGD 52
MTEMNGVYCS+RPMRI AATP+K++ + Y + Q P E D
Sbjct: 151 MTEMNGVYCSTRPMRISAATPKKTTSAYAAPAAPVPKPVYPVPAYTAPVVQVQPP--EYD 208
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
+NT IFVG LD NV++E+L+Q F Q+GEI SVK+ GKGCGFVQF R +AEEA+ K+
Sbjct: 209 VNNTAIFVGNLDLNVSEEELKQNFLQFGEIVSVKVQSGKGCGFVQFGTRASAEEAIQKMQ 268
Query: 113 GTVIGKQSFRADYG-------------------NQWSGAYYG-GQVYDGYGYAIPPPNDP 152
+IG+Q R +G NQWS AYYG GQ Y+ Y Y +DP
Sbjct: 269 EKMIGQQVVRISWGRTLTARQDLPGGWGPQMDPNQWS-AYYGYGQGYEAYAYG--AAHDP 325
Query: 153 SM 154
S
Sbjct: 326 SF 327
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALH 109
+IFVG L P++TD L++ F + Y + K+ KG GFV+F++ A+
Sbjct: 93 SIFVGDLAPDITDYLLQEMFRAHYPSVRGAKVVSDPNTGRSKGYGFVKFSDENERNRAMT 152
Query: 110 KLNGTVIGKQSFR 122
++NG + R
Sbjct: 153 EMNGVYCSTRPMR 165
>gi|302813198|ref|XP_002988285.1| hypothetical protein SELMODRAFT_447249 [Selaginella moellendorffii]
gi|300144017|gb|EFJ10704.1| hypothetical protein SELMODRAFT_447249 [Selaginella moellendorffii]
Length = 352
Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 70/129 (54%), Positives = 87/129 (67%), Gaps = 3/129 (2%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQ-GPQSEGDSSNTTIF 59
MTEM+GVYCSSRPMRI ATP+K + QQ + Y A P E D +NTTIF
Sbjct: 166 MTEMHGVYCSSRPMRIRTATPKKQT--QQHPVQRVSYQLVPAYAMPAPAGEDDFTNTTIF 223
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQ 119
VGGLD NV+ +DL+ FS YGEI KIP G+GCGFVQF R +AEEAL +++G+VIG+Q
Sbjct: 224 VGGLDQNVSLDDLKDVFSPYGEIKYTKIPPGRGCGFVQFMTRASAEEALKQVHGSVIGQQ 283
Query: 120 SFRADYGNQ 128
+ R +G
Sbjct: 284 TVRLSWGRH 292
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 18/113 (15%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
GA PR ++ ++ GG ++ +IFVG L +VTD L + F
Sbjct: 79 GAVMPRTEQAFRLNWACVGG-----------DKRDSGADDSIFVGDLAADVTDAMLLETF 127
Query: 77 -SQYGEIASVKIPVG------KGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
S+Y + S K+ + +G GFV+F + A+ +++G + R
Sbjct: 128 KSRYPSVKSAKVVMDVNSGRCRGYGFVRFGDEAEKSSAMTEMHGVYCSSRPMR 180
>gi|9758270|dbj|BAB08769.1| unnamed protein product [Arabidopsis thaliana]
Length = 390
Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 84/171 (49%), Positives = 103/171 (60%), Gaps = 31/171 (18%)
Query: 1 MTEMNGVYCSSRPMRIGAA-----TPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSN 55
MTEMNG YCS+RPMRIG A P + + YQ ++QG A + D +N
Sbjct: 213 MTEMNGQYCSTRPMRIGPAANKNALPMQPAMYQ---NTQGANAG----------DNDPNN 259
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TTIFVGGLD NVTD++L+ F Q+GE+ VKIP GK CGFVQ+AN+ +AE AL LNGT
Sbjct: 260 TTIFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKRCGFVQYANKASAEHALSVLNGTQ 319
Query: 116 IGKQSFRADYGN---------QWS-GAYYG--GQVYDGYGYAI-PPPNDPS 153
+G QS R +G QW+ G YYG Q GYGYA PP DP+
Sbjct: 320 LGGQSIRLSWGRSPNKQSDQAQWNGGGYYGYPPQPQGGYGYAAQPPTQDPN 370
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Query: 37 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------ 89
+A GA + Q+EG + TIFVG L P VTD L F YG + K+ +
Sbjct: 137 WAQAGAGEKRFQTEG--PDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRTTGR 194
Query: 90 GKGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
KG GFV+FA+ A+ ++NG + R
Sbjct: 195 SKGYGFVRFADENEQMRAMTEMNGQYCSTRPMR 227
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 44 GQGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFV 96
G G Q+ G +S+ ++++G L + + + F+Q GE S K+ K G GF+
Sbjct: 47 GIGSQNPGSASDVKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFI 106
Query: 97 QFANRENAEEALHKLNGTVI--GKQSFRADY 125
+F + AE L NG + +Q+FR ++
Sbjct: 107 EFVSHSVAERVLQTYNGAPMPSTEQTFRLNW 137
>gi|326513618|dbj|BAJ87828.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 388
Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 73/147 (49%), Positives = 95/147 (64%), Gaps = 25/147 (17%)
Query: 1 MTEMNGVYCSSRPMRIG-AATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIF 59
MTEMNG+ CSSRPMRIG AA +K++G Q++ + QG Q++ D SN+TIF
Sbjct: 232 MTEMNGMICSSRPMRIGPAANKQKANGVQEKVPT----------AQGIQTDNDPSNSTIF 281
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQ 119
VGGLDP+ T++ L+Q F+ YGE+ VKIPVGK CGFVQ+A+R +AEEAL L GT+I Q
Sbjct: 282 VGGLDPSATEDVLKQVFTPYGEVVHVKIPVGKRCGFVQYASRSSAEEALLMLQGTMIEGQ 341
Query: 120 SFRADYG--------------NQWSGA 132
+ R +G NQW GA
Sbjct: 342 NVRLSWGRSPSNKQVQSQQDFNQWGGA 368
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 19/113 (16%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
GA P Y+ +++ G + D ++ TIFVG L +VTD L++ F
Sbjct: 146 GAMMPNVEMAYRLNWATAG------------EKHDDGADYTIFVGDLAADVTDYLLQETF 193
Query: 77 -SQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
+QY + K+ KG GFV+F + A+ ++NG + + R
Sbjct: 194 RAQYPSVKGAKVVTDKLTMRSKGYGFVKFGDPTEQTRAMTEMNGMICSSRPMR 246
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 12/116 (10%)
Query: 37 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK----- 91
Y P Q P G + T+++G L + + + F+ GE+ SVK+ K
Sbjct: 66 YGWPSVPTQAP--AGPNEARTLWIGDLQYWMDENYVYNCFASTGEVQSVKLIRDKQTGQL 123
Query: 92 -GCGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAI 146
G GF++F +R AE L NG ++ + Y W+ A G + DG Y I
Sbjct: 124 QGYGFIEFTSRAGAERVLQTFNGAMM--PNVEMAYRLNWATA--GEKHDDGADYTI 175
>gi|302760919|ref|XP_002963882.1| hypothetical protein SELMODRAFT_80061 [Selaginella moellendorffii]
gi|300169150|gb|EFJ35753.1| hypothetical protein SELMODRAFT_80061 [Selaginella moellendorffii]
Length = 332
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/129 (54%), Positives = 87/129 (67%), Gaps = 3/129 (2%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQ-GPQSEGDSSNTTIF 59
MTEM+GVYCSSRPMRI ATP+K + QQ + Y A P E D +NTTIF
Sbjct: 166 MTEMHGVYCSSRPMRIRTATPKKQT--QQHPVQRVSYQLVPAYAMPAPAGEDDFTNTTIF 223
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQ 119
VGGLD NV+ +DL+ FS YGEI KIP G+GCGFVQF R +AEEAL +++G+VIG+Q
Sbjct: 224 VGGLDQNVSLDDLKDVFSPYGEIKYTKIPPGRGCGFVQFMTRASAEEALKQVHGSVIGQQ 283
Query: 120 SFRADYGNQ 128
+ R +G
Sbjct: 284 TVRLSWGRH 292
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDS-SNTTIFVGGLDPNVTDEDLRQP 75
GA PR ++ ++ GG + DS ++ +IFVG L +VTD L +
Sbjct: 79 GAVMPRTEQAFRLNWACVGG------------DKRDSGADDSIFVGDLAADVTDAMLLET 126
Query: 76 F-SQYGEIASVKIPVG------KGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
F S+Y + S K+ + +G GFV+F + A+ +++G + R
Sbjct: 127 FKSRYPSVKSAKVVMDVNSGRCRGYGFVRFGDETEKSSAMTEMHGVYCSSRPMR 180
>gi|326495674|dbj|BAJ85933.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 152
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/144 (52%), Positives = 97/144 (67%), Gaps = 20/144 (13%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
S+GDS+N T++VGGLD NV++++LR+ F++YG++ASVKIP+GK CGFVQ+ NR +AEEA
Sbjct: 14 HSDGDSNNRTVYVGGLDQNVSEDELRKSFAKYGDVASVKIPLGKQCGFVQYVNRTDAEEA 73
Query: 108 LHKLNGTVIGKQSFRADYGNQWS---------------GAYYGGQVYDGYGYAIPPPNDP 152
L LNG VIGKQ+ R +G S YYG Y GYGYA P P+ P
Sbjct: 74 LQGLNGAVIGKQAVRLSWGRSPSHKQSRGDSGNRRNNNNMYYGTPFYGGYGYASPVPH-P 132
Query: 153 SMYAAAAAAYGAYPVYGSHQQQVS 176
+MY A AYGAYP YG +QQ VS
Sbjct: 133 NMY---APAYGAYPFYG-NQQLVS 152
>gi|18423684|ref|NP_568815.1| RNA-binding protein 45A [Arabidopsis thaliana]
gi|75334165|sp|Q9FPJ8.1|RB45A_ARATH RecName: Full=Polyadenylate-binding protein RBP45A;
Short=Poly(A)-binding protein RBP45A; AltName:
Full=RNA-binding protein 45A; Short=AtRBP45A
gi|11762114|gb|AAG40335.1|AF324983_1 AT5g54900 [Arabidopsis thaliana]
gi|119360145|gb|ABL66801.1| At5g54900 [Arabidopsis thaliana]
gi|332009171|gb|AED96554.1| RNA-binding protein 45A [Arabidopsis thaliana]
Length = 387
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/171 (49%), Positives = 103/171 (60%), Gaps = 31/171 (18%)
Query: 1 MTEMNGVYCSSRPMRIGAA-----TPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSN 55
MTEMNG YCS+RPMRIG A P + + YQ ++QG A + D +N
Sbjct: 213 MTEMNGQYCSTRPMRIGPAANKNALPMQPAMYQ---NTQGANAG----------DNDPNN 259
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TTIFVGGLD NVTD++L+ F Q+GE+ VKIP GK CGFVQ+AN+ +AE AL LNGT
Sbjct: 260 TTIFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKRCGFVQYANKASAEHALSVLNGTQ 319
Query: 116 IGKQSFRADYGN---------QWS-GAYYG--GQVYDGYGYAI-PPPNDPS 153
+G QS R +G QW+ G YYG Q GYGYA PP DP+
Sbjct: 320 LGGQSIRLSWGRSPNKQSDQAQWNGGGYYGYPPQPQGGYGYAAQPPTQDPN 370
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Query: 37 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------ 89
+A GA + Q+EG + TIFVG L P VTD L F YG + K+ +
Sbjct: 137 WAQAGAGEKRFQTEG--PDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRTTGR 194
Query: 90 GKGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
KG GFV+FA+ A+ ++NG + R
Sbjct: 195 SKGYGFVRFADENEQMRAMTEMNGQYCSTRPMR 227
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 44 GQGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFV 96
G G Q+ G +S+ ++++G L + + + F+Q GE S K+ K G GF+
Sbjct: 47 GIGSQNPGSASDVKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFI 106
Query: 97 QFANRENAEEALHKLNGTVI--GKQSFRADY 125
+F + AE L NG + +Q+FR ++
Sbjct: 107 EFVSHSVAERVLQTYNGAPMPSTEQTFRLNW 137
>gi|302792090|ref|XP_002977811.1| hypothetical protein SELMODRAFT_232989 [Selaginella moellendorffii]
gi|300154514|gb|EFJ21149.1| hypothetical protein SELMODRAFT_232989 [Selaginella moellendorffii]
Length = 455
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 91/158 (57%), Gaps = 31/158 (19%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSG--------------------------YQQQYSSQ 34
M+EMNGVYCSSRPMRI AATP+K+
Sbjct: 180 MSEMNGVYCSSRPMRISAATPKKAMAAGLTTVTAATIVPQPTIASPFKAATTTTTPTYQT 239
Query: 35 GGYASNGAPGQGPQS-----EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
Y+ P QS + D +NTTIFVGGLD N+T+E+++Q FSQ GE+ SVKIP
Sbjct: 240 MPYSITPPPSLSIQSQVLPPDSDPTNTTIFVGGLDLNITEEEVKQTFSQIGELVSVKIPP 299
Query: 90 GKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYGN 127
GKGC FVQ+A R +AE+AL +L+GTVIG+Q+ R +G
Sbjct: 300 GKGCAFVQYAQRNSAEDALQRLHGTVIGQQAIRLSWGR 337
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 7/105 (6%)
Query: 25 SGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIA 83
+G Q + Q + + G G + +IFVG L P+VTD L + F +++ +
Sbjct: 90 NGTQMPQTEQAFRLNWASFGMGEKRMDGGPELSIFVGDLAPDVTDYMLHETFRTRFPSVR 149
Query: 84 SVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
K+ + KG GFV+FA+ A+ ++NG + R
Sbjct: 150 GAKVVIDAVTGRSKGYGFVRFADENERARAMSEMNGVYCSSRPMR 194
Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + + LR F+ GE+ S K+ K G GF++F + AE L
Sbjct: 29 TLWIGDLQYWMDENYLRNLFAHTGEVLSAKVIRNKQTGYPEGYGFIEFNSHPAAERVLLA 88
Query: 111 LNGTVI--GKQSFRADYGN 127
NGT + +Q+FR ++ +
Sbjct: 89 YNGTQMPQTEQAFRLNWAS 107
>gi|21592583|gb|AAM64532.1| putative DNA binding protein [Arabidopsis thaliana]
Length = 404
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/158 (48%), Positives = 96/158 (60%), Gaps = 20/158 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK-SSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIF 59
MTEMNGV CS+RPMRIG A +K +G + Y S G ++ D +NTT+F
Sbjct: 213 MTEMNGVPCSTRPMRIGPAASKKGVTGQRDSYQSSAA---------GVTTDNDPNNTTVF 263
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQ 119
VGGLD +VTD+ L+ FSQYGEI VKIP GK CGFVQF+ + AEEAL LNG +G
Sbjct: 264 VGGLDASVTDDHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGT 323
Query: 120 SFRADYG----NQWSGA----YYG--GQVYDGYGYAIP 147
+ R +G N+ SG YYG GQ + YGY +P
Sbjct: 324 TVRLSWGRSPSNKQSGDPSQFYYGGYGQGQEQYGYTMP 361
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFANRENA 104
DS + TIFVG L +VTD L + F + Y + K+ + KG GFV+F++
Sbjct: 150 DSPDYTIFVGDLAADVTDYILLETFRASYPSVKGAKVVINRVTGRTKGYGFVRFSDESEQ 209
Query: 105 EEALHKLNGTVIGKQSFR 122
A+ ++NG + R
Sbjct: 210 IRAMTEMNGVPCSTRPMR 227
>gi|15221071|ref|NP_172630.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75336898|sp|Q9SAB3.1|RB45B_ARATH RecName: Full=Polyadenylate-binding protein RBP45B;
Short=Poly(A)-binding protein RBP45B; AltName:
Full=RNA-binding protein 45B; Short=AtRBP45B
gi|4835793|gb|AAD30259.1|AC007296_20 Similar to gb|U90212 DNA binding protein ACBF from Nicotiana
tabacum and contains 3 PF|00076 RNA recognition motif
domains. ESTs gb|T44278, gb|R65195, gb|N65904,
gb|H37499, gb|R90487, gb|N95952, gb|T44278, gb|Z20166,
gb|N96891, gb|W43137, gb|F15504, gb|F15495 and gb|Z30868
come from this gene [Arabidopsis thaliana]
gi|20260604|gb|AAM13200.1| similar to gb|U90212 DNA binding protein ACBF from Nicotiana
tabacum and contains 3 PF|00076 RNA recognition motif
domains [Arabidopsis thaliana]
gi|30725662|gb|AAP37853.1| At1g11650 [Arabidopsis thaliana]
gi|332190643|gb|AEE28764.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 405
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/158 (48%), Positives = 96/158 (60%), Gaps = 20/158 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK-SSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIF 59
MTEMNGV CS+RPMRIG A +K +G + Y S G ++ D +NTT+F
Sbjct: 214 MTEMNGVPCSTRPMRIGPAASKKGVTGQRDSYQSSAA---------GVTTDNDPNNTTVF 264
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQ 119
VGGLD +VTD+ L+ FSQYGEI VKIP GK CGFVQF+ + AEEAL LNG +G
Sbjct: 265 VGGLDASVTDDHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGT 324
Query: 120 SFRADYG----NQWSGA----YYG--GQVYDGYGYAIP 147
+ R +G N+ SG YYG GQ + YGY +P
Sbjct: 325 TVRLSWGRSPSNKQSGDPSQFYYGGYGQGQEQYGYTMP 362
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFANRENA 104
DS + TIFVG L +VTD L + F + Y + K+ + KG GFV+F++
Sbjct: 151 DSPDYTIFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQ 210
Query: 105 EEALHKLNGTVIGKQSFR 122
A+ ++NG + R
Sbjct: 211 IRAMTEMNGVPCSTRPMR 228
>gi|302794528|ref|XP_002979028.1| hypothetical protein SELMODRAFT_418663 [Selaginella moellendorffii]
gi|302806386|ref|XP_002984943.1| hypothetical protein SELMODRAFT_424039 [Selaginella moellendorffii]
gi|300147529|gb|EFJ14193.1| hypothetical protein SELMODRAFT_424039 [Selaginella moellendorffii]
gi|300153346|gb|EFJ19985.1| hypothetical protein SELMODRAFT_418663 [Selaginella moellendorffii]
Length = 408
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/136 (50%), Positives = 93/136 (68%), Gaps = 1/136 (0%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M+EMNG+YCSSRPMRI AATP+K+ + Q +P Q ++ D +NTTIFV
Sbjct: 172 MSEMNGIYCSSRPMRINAATPKKAL-IPSAPAPQKVTTFATSPLQNVPNDNDPNNTTIFV 230
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDP V++E+L++ F ++GE+ VKIP GKGCGFVQF +R AEEAL KL+GT+I +Q+
Sbjct: 231 GGLDPAVSEEELQKTFGEFGELVYVKIPPGKGCGFVQFTHRSCAEEALGKLHGTMIRQQA 290
Query: 121 FRADYGNQWSGAYYGG 136
R +G + Y G
Sbjct: 291 IRLSWGRTANKQYPAG 306
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRE 102
EG N+ IFVG L P+VTD L++ F ++Y + K+ KG GFV+FA+
Sbjct: 108 EGGPENS-IFVGDLAPDVTDYMLQETFRTRYPSVRGAKVVTDVATGRSKGYGFVRFADDS 166
Query: 103 NAEEALHKLNGTVIGKQSFRAD 124
A+ ++NG + R +
Sbjct: 167 ERVRAMSEMNGIYCSSRPMRIN 188
Score = 39.3 bits (90), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T++VG L + + L FS GE+ S KI K G GFV+FA+ AE L
Sbjct: 21 TLWVGDLQYWMDESYLNSIFSSTGELVSAKIIRNKASGFPEGYGFVEFASHACAERVLTA 80
Query: 111 LNGTVI--GKQSFRADYGNQWSGAYYG 135
GT + +Q FR ++ AY+G
Sbjct: 81 FTGTQMPQTEQLFRLNW------AYFG 101
>gi|224078632|ref|XP_002305583.1| predicted protein [Populus trichocarpa]
gi|222848547|gb|EEE86094.1| predicted protein [Populus trichocarpa]
Length = 382
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/126 (50%), Positives = 83/126 (65%), Gaps = 7/126 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG +CS+RPMR+G A+ +K+ QQ Y PQ++GD +NTTIFV
Sbjct: 201 MTEMNGAFCSTRPMRVGLASNKKAVVGQQ-------YPKASYQNPQPQNDGDPNNTTIFV 253
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G LD NV D+ L++ F QYG++ VKIP GK CGFVQFA+R +AEEAL LNG + Q+
Sbjct: 254 GNLDSNVMDDHLKELFGQYGQLLHVKIPAGKRCGFVQFADRSSAEEALKMLNGAQLSGQN 313
Query: 121 FRADYG 126
R +G
Sbjct: 314 IRLSWG 319
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 51/122 (41%), Gaps = 9/122 (7%)
Query: 37 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG----- 90
+ N A G DS + TIFVG L +VTD L++ F + + + K+ +
Sbjct: 123 FRLNWASFSGGDKRDDSPDFTIFVGDLAADVTDFMLQETFRAHFPSVKGAKVVIDRLTGR 182
Query: 91 -KGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPP 149
KG GFV+F + A+ ++NG + R + GQ Y Y P P
Sbjct: 183 TKGYGFVRFGDESEQLRAMTEMNGAFCSTRPMRVGLASNKKAVV--GQQYPKASYQNPQP 240
Query: 150 ND 151
+
Sbjct: 241 QN 242
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + + + F+ GE+ASVKI K G GF++ + AE L
Sbjct: 51 TLWIGDLQYWMDENYIASCFAHTGEVASVKIIRNKQTSQIEGYGFIEMTSHGAAERILQT 110
Query: 111 LNGTVI--GKQSFRADYG 126
NGT + G+Q+FR ++
Sbjct: 111 YNGTPMPNGEQNFRLNWA 128
>gi|297844004|ref|XP_002889883.1| ATRBP45B [Arabidopsis lyrata subsp. lyrata]
gi|297335725|gb|EFH66142.1| ATRBP45B [Arabidopsis lyrata subsp. lyrata]
Length = 408
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/158 (48%), Positives = 94/158 (59%), Gaps = 20/158 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK-SSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIF 59
MTEMNGV CS+RPMRIG A +K +G + Y S G G P ++ D +NTT+F
Sbjct: 216 MTEMNGVPCSTRPMRIGPAASKKGVTGQRDSYQSAAG----GVP-----TDNDPNNTTVF 266
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQ 119
VGGLD +VTD+ L+ F QYGEI VKIP GK CGFVQF+ + AEEAL LNG +G
Sbjct: 267 VGGLDQSVTDDHLKNVFGQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGT 326
Query: 120 SFRADYGNQWSGA--------YYG--GQVYDGYGYAIP 147
+ R +G S YYG GQ + YGY +P
Sbjct: 327 TVRLSWGRSPSNKQSADPSQFYYGGYGQGQEQYGYTMP 364
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 47/109 (43%), Gaps = 7/109 (6%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFANRENA 104
DS + TIFVG L +VTD L + F + Y + K+ + KG GFV+F++
Sbjct: 153 DSPDYTIFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRATGRTKGYGFVRFSDESEQ 212
Query: 105 EEALHKLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPS 153
A+ ++NG + R G Y +P NDP+
Sbjct: 213 IRAMTEMNGVPCSTRPMRIGPAASKKGVTGQRDSYQSAAGGVPTDNDPN 261
>gi|297799290|ref|XP_002867529.1| hypothetical protein ARALYDRAFT_913848 [Arabidopsis lyrata subsp.
lyrata]
gi|297313365|gb|EFH43788.1| hypothetical protein ARALYDRAFT_913848 [Arabidopsis lyrata subsp.
lyrata]
Length = 418
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/170 (47%), Positives = 94/170 (55%), Gaps = 28/170 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCSSRPMR G A +K Q Y + QG Q E D +NTTIFV
Sbjct: 233 MTEMNGQYCSSRPMRTGPAANKKPLTMQP-----ASYQNT----QGNQGESDPTNTTIFV 283
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G LD +V ++DL+ F Q+GE+ VKIP GK CGFVQ+ANR AE+AL LNGT +G QS
Sbjct: 284 GALDQSVIEDDLKSVFGQFGELVHVKIPAGKRCGFVQYANRACAEQALSLLNGTQLGGQS 343
Query: 121 FRADYGNQWSG------------------AYYGGQVYDGYGYAIPPPNDP 152
R +G S Y Q Y+ YGYA PPP DP
Sbjct: 344 IRLSWGRSPSNKQTQPDQAQYGGGGGGGYYGYPPQGYEAYGYA-PPPQDP 392
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
++++G L P + + L FS G+ S K+ K G GF++F N AE L
Sbjct: 82 SLWIGDLQPWMEENYLMNIFSLTGDATSAKVIRNKQSGYSEGYGFIEFVNHATAERILQA 141
Query: 111 LNGTVI--GKQSFRADY 125
NGT + Q+FR ++
Sbjct: 142 YNGTTMPSSDQAFRLNW 158
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFV 96
G G + + + T+FVG L P+VTD L + F + Y + K+ KG GFV
Sbjct: 162 GAGERRQAEGPEHTVFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVTDRTTGRSKGYGFV 221
Query: 97 QFANRENAEEALHKLNGTVIGKQSFR 122
+F + A+ ++NG + R
Sbjct: 222 RFGDESEQIRAMTEMNGQYCSSRPMR 247
>gi|357111822|ref|XP_003557709.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 361
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 97/185 (52%), Gaps = 43/185 (23%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCS+RPMR+G AT G S+ DS+NT +FV
Sbjct: 201 MTEMNGAYCSTRPMRVGPATKMA----------------------GKYSDSDSNNTRLFV 238
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLD VTDEDL++ FS YGE+ VK+ GK CGFV + NR +AEEA+ LNG+++G +
Sbjct: 239 GGLDRIVTDEDLKKAFSPYGELTEVKVIAGKKCGFVTYLNRASAEEAMRILNGSLLGDNT 298
Query: 121 FRADYG-----------NQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPVYG 169
R +G NQW+G G G GY P DP M+ Y +P Y
Sbjct: 299 IRISWGRSLYHKQKHDQNQWNGERQGS----GPGYR-SHPEDPKMH-----GYTGHPEYP 348
Query: 170 SHQQQ 174
+ QQ
Sbjct: 349 HYPQQ 353
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 7/94 (7%)
Query: 47 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFA 99
P + D I+VG L +VTD L F S+Y + KI KG GFV F
Sbjct: 133 PVQKRDDDGHNIYVGDLAFDVTDFMLHHVFKSRYPSVKHAKIAWDHFNGRSKGYGFVVFG 192
Query: 100 NRENAEEALHKLNGTVIGKQSFRADYGNQWSGAY 133
+ +A+ ++NG + R + +G Y
Sbjct: 193 DVNERRQAMTEMNGAYCSTRPMRVGPATKMAGKY 226
>gi|18416906|ref|NP_567764.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75331668|sp|Q93W34.1|RP45C_ARATH RecName: Full=Polyadenylate-binding protein RBP45C;
Short=Poly(A)-binding protein RBP45C; AltName:
Full=RNA-binding protein 45C; Short=AtRBP45C
gi|13878153|gb|AAK44154.1|AF370339_1 putative DNA binding protein [Arabidopsis thaliana]
gi|15450814|gb|AAK96678.1| putative DNA binding protein [Arabidopsis thaliana]
gi|17104569|gb|AAL34173.1| putative DNA binding protein [Arabidopsis thaliana]
gi|20259888|gb|AAM13291.1| putative DNA binding protein [Arabidopsis thaliana]
gi|332659882|gb|AEE85282.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 415
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/168 (47%), Positives = 94/168 (55%), Gaps = 26/168 (15%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCSSRPMR G A +K Q Y + QG E D +NTTIFV
Sbjct: 232 MTEMNGQYCSSRPMRTGPAANKKPLTMQP-----ASYQNT----QGNSGESDPTNTTIFV 282
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G +D +VT++DL+ F Q+GE+ VKIP GK CGFVQ+ANR AE+AL LNGT +G QS
Sbjct: 283 GAVDQSVTEDDLKSVFGQFGELVHVKIPAGKRCGFVQYANRACAEQALSVLNGTQLGGQS 342
Query: 121 FRADYGNQWSG----------------AYYGGQVYDGYGYAIPPPNDP 152
R +G S Y Q Y+ YGYA PPP DP
Sbjct: 343 IRLSWGRSPSNKQTQPDQAQYGGGGGYYGYPPQGYEAYGYA-PPPQDP 389
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFV 96
G G + + + T+FVG L P+VTD L + F + Y + K+ KG GFV
Sbjct: 161 GAGERRQAEGPEHTVFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSKGYGFV 220
Query: 97 QFANRENAEEALHKLNGTVIGKQSFR 122
+FA+ A+ ++NG + R
Sbjct: 221 RFADESEQIRAMTEMNGQYCSSRPMR 246
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
++++G L P + + L F GE + K+ K G GF++F N AE L
Sbjct: 81 SLWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEGYGFIEFVNHATAERNLQT 140
Query: 111 LNGTVI--GKQSFRADY 125
NG + +Q+FR ++
Sbjct: 141 YNGAPMPSSEQAFRLNW 157
>gi|4455223|emb|CAB36546.1| putative DNA binding protein [Arabidopsis thaliana]
gi|7269553|emb|CAB79555.1| putative DNA binding protein [Arabidopsis thaliana]
Length = 427
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/168 (47%), Positives = 94/168 (55%), Gaps = 26/168 (15%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCSSRPMR G A +K Q Y + QG E D +NTTIFV
Sbjct: 232 MTEMNGQYCSSRPMRTGPAANKKPLTMQP-----ASYQNT----QGNSGESDPTNTTIFV 282
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G +D +VT++DL+ F Q+GE+ VKIP GK CGFVQ+ANR AE+AL LNGT +G QS
Sbjct: 283 GAVDQSVTEDDLKSVFGQFGELVHVKIPAGKRCGFVQYANRACAEQALSVLNGTQLGGQS 342
Query: 121 FRADYGNQWSG----------------AYYGGQVYDGYGYAIPPPNDP 152
R +G S Y Q Y+ YGYA PPP DP
Sbjct: 343 IRLSWGRSPSNKQTQPDQAQYGGGGGYYGYPPQGYEAYGYA-PPPQDP 389
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Query: 32 SSQGGYASNGAP-GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP- 88
SS+ + N A G G + + + T+FVG L P+VTD L + F + Y + K+
Sbjct: 148 SSEQAFRLNWAQLGAGERRQAEGPEHTVFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVN 207
Query: 89 -----VGKGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
KG GFV+FA+ A+ ++NG + R
Sbjct: 208 DRTTGRSKGYGFVRFADESEQIRAMTEMNGQYCSSRPMR 246
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
++++G L P + + L F GE + K+ K G GF++F N AE L
Sbjct: 81 SLWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEGYGFIEFVNHATAERNLQT 140
Query: 111 LNGTVI--GKQSFRADY 125
NG + +Q+FR ++
Sbjct: 141 YNGAPMPSSEQAFRLNW 157
>gi|449471209|ref|XP_004153241.1| PREDICTED: polyadenylate-binding protein RBP45-like, partial
[Cucumis sativus]
Length = 156
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/125 (57%), Positives = 82/125 (65%), Gaps = 15/125 (12%)
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 104
QG Q+E D +NTTIFVG LD NVTDE LRQ F QYGE+ VKIPVGK CGFVQFA+R A
Sbjct: 6 QGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGKRCGFVQFADRNCA 65
Query: 105 EEALHKLNGTVIGKQSFRADYG------------NQWS--GAYYGGQVYDGYGYAIPPPN 150
EEAL LNGT IG Q+ R +G NQW+ G Y GQ Y+ Y YA P P
Sbjct: 66 EEALRVLNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGYYGYGQGYENYSYA-PAPQ 124
Query: 151 DPSMY 155
DP+M+
Sbjct: 125 DPNMF 129
>gi|413919586|gb|AFW59518.1| hypothetical protein ZEAMMB73_768040 [Zea mays]
Length = 329
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/103 (60%), Positives = 70/103 (67%), Gaps = 10/103 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG-QGPQSEGDSSNTTIF 59
MTEMNG+ CSSRPMRIG A RK++G G P QG QSE D +NTTIF
Sbjct: 235 MTEMNGMPCSSRPMRIGPAASRKNAG---------GVVQERVPNSQGAQSENDPNNTTIF 285
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRE 102
VGGLDPNVT++ L+Q FS YGE+ VKIPVGK CGFVQF R
Sbjct: 286 VGGLDPNVTEDVLKQAFSPYGEVIHVKIPVGKRCGFVQFVTRR 328
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQY------GEIASVKIPV-GKGCGFVQFAN 100
+ D+ + TIFVG L +VTD L++ F + ++ + K+ + KG GFV+F +
Sbjct: 168 EKRDDTPDYTIFVGDLAADVTDYLLQETFRVHYPSVKGAKVVTDKLTMRTKGYGFVKFGD 227
Query: 101 RENAEEALHKLNGTVIGKQSFR 122
A+ ++NG + R
Sbjct: 228 PTEQARAMTEMNGMPCSSRPMR 249
Score = 35.8 bits (81), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + D + FS GE+ +VK+ K G GFV+F +R AE L
Sbjct: 87 TLWIGDLQYWMDDNYVFGCFSNTGEVQNVKLIRDKNSGQLQGYGFVEFTSRAAAERVLQT 146
Query: 111 LNGTVIGK--QSFRADYGN 127
NG ++ +FR ++ +
Sbjct: 147 YNGQMMPNVDLTFRLNWAS 165
>gi|242045812|ref|XP_002460777.1| hypothetical protein SORBIDRAFT_02g034736 [Sorghum bicolor]
gi|241924154|gb|EER97298.1| hypothetical protein SORBIDRAFT_02g034736 [Sorghum bicolor]
Length = 171
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 82/126 (65%), Gaps = 16/126 (12%)
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 104
QG SE D +NTT+FVGGLD NV +E LRQ F+ +GEI+ VKIPVGK CGFVQF +R A
Sbjct: 6 QGISSENDPNNTTVFVGGLDSNVNEEYLRQIFTPHGEISYVKIPVGKHCGFVQFTSRSCA 65
Query: 105 EEALHKLNGTVIGKQSFRADYG-------------NQWSG-AYYG--GQVYDGYGYAIPP 148
EEA+ LNG+ IG Q R +G +Q++G +YYG Q Y+GYGYA P
Sbjct: 66 EEAIQMLNGSQIGGQKVRLSWGRTQNRQASQQDANSQYNGNSYYGYRQQGYEGYGYAAPN 125
Query: 149 PNDPSM 154
DPSM
Sbjct: 126 TQDPSM 131
>gi|348670884|gb|EGZ10705.1| hypothetical protein PHYSODRAFT_520170 [Phytophthora sojae]
Length = 390
Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 77/116 (66%), Gaps = 15/116 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ MNGVYCSSRPMR+ AT R S QG + GAP E + +NTT+FV
Sbjct: 155 LQTMNGVYCSSRPMRVSVATERSKS------RQQGAF---GAP------EEEGTNTTVFV 199
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
GGLDP+ T+++LR F GEI SVK+P G+GCGFVQ+ ++E AE A+ ++NGTVI
Sbjct: 200 GGLDPSTTEDELRARFGALGEIVSVKVPPGRGCGFVQYTSKEAAEVAITQMNGTVI 255
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 41 GAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PV---GKGC 93
GA G+ ++ D S IFVG L P+VTDE L F S++ + K+ PV KG
Sbjct: 84 GAGGRRIETSDDHS---IFVGDLAPDVTDELLLSTFNSRFTSVRGAKVVMDPVTRMSKGF 140
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQWS 130
GFV+F ++E A++AL +NG + R + S
Sbjct: 141 GFVRFGSKEEADQALQTMNGVYCSSRPMRVSVATERS 177
>gi|213401961|ref|XP_002171753.1| RNA-binding post-transcriptional regulator csx1
[Schizosaccharomyces japonicus yFS275]
gi|211999800|gb|EEB05460.1| RNA-binding post-transcriptional regulator csx1
[Schizosaccharomyces japonicus yFS275]
Length = 476
Score = 115 bits (287), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 94/173 (54%), Gaps = 16/173 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGGYASNGAPGQGPQSEG---DSSNT 56
+TEM GVYC +RPMRI ATP+ K+ Y G G G PQ D +NT
Sbjct: 250 LTEMQGVYCGNRPMRIAMATPKSKNHMYSPMNMMHIGLQPVGFYG-APQPVNQFTDPTNT 308
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
T+FVGGL VT+E+LR F +GEI VKIP GKGCGFVQF NR++AE A++++ G +
Sbjct: 309 TVFVGGLSGYVTEEELRFLFQNFGEIIYVKIPPGKGCGFVQFVNRQSAELAINQMQGYPL 368
Query: 117 GKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPVYG 169
GK R +G GG V Y PP + AA+ A G Y G
Sbjct: 369 GKSRIRLSWGRS-----QGGNVGAPIAYRSPP------HHAASTASGLYHSLG 410
Score = 43.1 bits (100), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 16/129 (12%)
Query: 2 TEMNGVYCSSRPMRI-GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
E N + + M + G P + ++ ++S GG + EG + +IFV
Sbjct: 144 VEFNSPASAMKAMSLNGTVIPGTNRFFKLNWASGGGLHD--------RREGKTPEFSIFV 195
Query: 61 GGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKLNG 113
G L P VT+ L F S+Y S KI + +G GFV+F + + + AL ++ G
Sbjct: 196 GDLGPEVTEPMLLSLFQSRYRSCKSAKIMMDSNTNLSRGYGFVRFYDENDQKRALTEMQG 255
Query: 114 TVIGKQSFR 122
G + R
Sbjct: 256 VYCGNRPMR 264
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEA 107
+N+T+++G L P +T+ ++Q ++ GE +VKI + G FV+F + +A +A
Sbjct: 96 NNSTLWMGELAPFITEAMVQQIWNSLGENVNVKIIRDRYSGLNAGYCFVEFNSPASAMKA 155
Query: 108 LHKLNGTVI 116
+ LNGTVI
Sbjct: 156 M-SLNGTVI 163
>gi|223973753|gb|ACN31064.1| unknown [Zea mays]
Length = 359
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 80/126 (63%), Gaps = 15/126 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+TEMNG YCS+RPMRIG +K+S +Q++ +S D++N+ +FV
Sbjct: 208 LTEMNGAYCSTRPMRIGPVPKKKNSFRSKQWT---------------ESYHDANNSRLFV 252
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G LD +VT EDL Q FS YGE+ VK GKGCGFV ++NR +AEEA+ LNG+ +G ++
Sbjct: 253 GQLDQSVTSEDLMQAFSPYGELVDVKALPGKGCGFVTYSNRASAEEAIRMLNGSQLGGKA 312
Query: 121 FRADYG 126
+ +G
Sbjct: 313 IKLSWG 318
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 22/101 (21%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAE 105
SS+ +IFVG L NVT L F ++Y + S KI + K GFVQF + +
Sbjct: 146 SSDHSIFVGDLAYNVTGYMLHHVFKARYPSVKSAKIIFDKFTGLSKCYGFVQFGDVDEQI 205
Query: 106 EALHKLNGTVIG------------KQSFRADYGNQWSGAYY 134
+AL ++NG K SFR+ QW+ +Y+
Sbjct: 206 QALTEMNGAYCSTRPMRIGPVPKKKNSFRS---KQWTESYH 243
>gi|384484722|gb|EIE76902.1| hypothetical protein RO3G_01606 [Rhizopus delemar RA 99-880]
Length = 204
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 82/126 (65%), Gaps = 7/126 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+TEMNG+ C +RPMR+ ATP+ ++ Q++Y A A Q P D +NTT+F+
Sbjct: 27 VTEMNGILCKNRPMRVSFATPKTNN--QERYIQLALQAP--ALVQQPT---DPNNTTVFI 79
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGL VT+++LRQ F +G+I +VK+P GKGCGFVQ+ R +AE A+ K+NG +IG
Sbjct: 80 GGLSSPVTEDELRQYFGSFGDIMNVKLPPGKGCGFVQYTTRISAETAIEKMNGFLIGTSR 139
Query: 121 FRADYG 126
R +G
Sbjct: 140 IRLSWG 145
>gi|326532404|dbj|BAK05131.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 356
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 96/178 (53%), Gaps = 31/178 (17%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCSSRPMRIG AT ++ + +QG Y + + +N+ +FV
Sbjct: 192 MTEMNGAYCSSRPMRIGPAT------FKSDFRTQGTYP-----------DSNRNNSRLFV 234
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G LD VTDEDL + FS YGE+ +VKI GK CGFV +++R +AEEAL LNG+ +G
Sbjct: 235 GQLDSCVTDEDLIKAFSPYGEL-TVKIIEGKSCGFVTYSSRASAEEALTILNGSQLGDNI 293
Query: 121 FRADYG-------NQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPVYGSH 171
+ +QW+G +G G GY P DP++ Y +P Y H
Sbjct: 294 ITVVWARHAPKKQDQWNGVDHGHPQSSGPGYGC-CPEDPNI-----VGYTGHPGYTYH 345
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 14/85 (16%)
Query: 58 IFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFANRENAEEALHK 110
I+VGGL +VTD L F ++Y + K+ KG GFV F + +A+ +
Sbjct: 135 IYVGGLSFDVTDFMLHHVFKNRYPSVKKAKVIWNVFARRSKGYGFVVFGDVNECTQAMTE 194
Query: 111 LNGTV-------IGKQSFRADYGNQ 128
+NG IG +F++D+ Q
Sbjct: 195 MNGAYCSSRPMRIGPATFKSDFRTQ 219
>gi|451846221|gb|EMD59531.1| hypothetical protein COCSADRAFT_251085 [Cochliobolus sativus
ND90Pr]
Length = 406
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 77/144 (53%), Gaps = 18/144 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEG--------- 51
+TEM GVYC +RPMRI ATP+ SG G G PG G S G
Sbjct: 216 LTEMQGVYCGNRPMRISTATPKNKSGGPGGPGGMGMPQGAGGPGMGMYSMGAPPMGNYYG 275
Query: 52 ---------DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRE 102
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R
Sbjct: 276 APQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRH 335
Query: 103 NAEEALHKLNGTVIGKQSFRADYG 126
AE A++++ G IG R +G
Sbjct: 336 AAEMAINQMQGYPIGNSRVRLSWG 359
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 14/113 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ ++S GG A +GP+ +IFVG L P VT+ L Q F
Sbjct: 125 GQLIPNSNRPFKLNWASGGGLADRSRDERGPE-------FSIFVGDLGPEVTEFVLVQLF 177
Query: 77 -SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
++Y S KI P+ +G GFV+FA+ E+ ++AL ++ G G + R
Sbjct: 178 QNKYPSTKSAKIMSDPISGMSRGYGFVRFASEEDQQKALTEMQGVYCGNRPMR 230
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG-----FVQFANRENAEEALHK 110
TT+++G L+P + + +R + GE +VK+ K G FV FA+ + A +AL+
Sbjct: 64 TTLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSGNAGYCFVDFASPDAAAKALN- 122
Query: 111 LNGTVI 116
LNG +I
Sbjct: 123 LNGQLI 128
>gi|430812963|emb|CCJ29641.1| unnamed protein product [Pneumocystis jirovecii]
Length = 853
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 74/129 (57%), Gaps = 4/129 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEG---DSSNTT 57
+TEM GVYC SRP+RI ATP+ G G + G G PQ D +NTT
Sbjct: 219 LTEMQGVYCGSRPIRISTATPKNKPGMSHINMMHMGMSPLGYYG-APQPMNQFTDPNNTT 277
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIG 117
+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A+ ++ G IG
Sbjct: 278 VFVGGLSSFVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAISQMQGYPIG 337
Query: 118 KQSFRADYG 126
R +G
Sbjct: 338 NSRVRLSWG 346
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG------FVQFANRENAEEALH 109
T +++G L+P V + +RQ + GE +VK+ K G FV F++ A +AL
Sbjct: 67 TALWMGELEPWVDEAFIRQVWFNLGEQVNVKMIRDKFSGSNAGYCFVDFSSTAAASKAL- 125
Query: 110 KLNGTVI 116
LNGT+I
Sbjct: 126 SLNGTII 132
>gi|451993069|gb|EMD85544.1| hypothetical protein COCHEDRAFT_1035442 [Cochliobolus
heterostrophus C5]
Length = 409
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 77/144 (53%), Gaps = 18/144 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEG--------- 51
+TEM GVYC +RPMRI ATP+ SG G G PG G S G
Sbjct: 219 LTEMQGVYCGNRPMRISTATPKNKSGGPGGPGGMGMPQGAGGPGMGMYSMGAPPMGNYYG 278
Query: 52 ---------DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRE 102
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R
Sbjct: 279 APQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRH 338
Query: 103 NAEEALHKLNGTVIGKQSFRADYG 126
AE A++++ G IG R +G
Sbjct: 339 AAEMAINQMQGYPIGNSRVRLSWG 362
Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 7/73 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALH 109
+IFVG L P VT+ L Q F ++Y S KI P+ +G GFV+FA+ E+ ++AL
Sbjct: 161 SIFVGDLGPEVTEFVLVQLFQNKYPSTKSAKIMSDPISGMSRGYGFVRFASEEDQQKALT 220
Query: 110 KLNGTVIGKQSFR 122
++ G G + R
Sbjct: 221 EMQGVYCGNRPMR 233
Score = 35.8 bits (81), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG-----FVQFANRENAEEALHK 110
TT+++G L+P + + +R + GE +VK+ K G FV FA+ + A +AL+
Sbjct: 64 TTLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSGNAGYCFVDFASPDAAAKALN- 122
Query: 111 LNGTVI 116
LNG +I
Sbjct: 123 LNGQLI 128
>gi|325183868|emb|CCA18326.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325183943|emb|CCA18401.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 429
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 79/127 (62%), Gaps = 8/127 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIF 59
+ MNGVYCSSRPMR+ AT R K+ G S Y G +E + +NTT+F
Sbjct: 155 LQTMNGVYCSSRPMRVSVATDRTKTRGIMPPPIS---YTVVGTG----NTEEEGANTTVF 207
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQ 119
+GGLDP+ T++DLR F GEI SVK+P G+GCGFVQ+ ++ A+ A++++NG +I
Sbjct: 208 IGGLDPSTTEDDLRARFGVIGEIMSVKVPPGRGCGFVQYVTKDAADVAINQMNGALINGV 267
Query: 120 SFRADYG 126
R +G
Sbjct: 268 KVRCAWG 274
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPVG------KGCGFVQFANRENAEEALH 109
+IFVG L P V+DE L FS ++ + K+ + KG GFV+F ++ A++AL
Sbjct: 97 SIFVGDLAPEVSDELLLSTFSTRFSSVRGAKVVIDPVTRMPKGFGFVRFGDKGEADQALQ 156
Query: 110 KLNGTVIGKQSFRA 123
+NG + R
Sbjct: 157 TMNGVYCSSRPMRV 170
>gi|255073999|ref|XP_002500674.1| predicted protein [Micromonas sp. RCC299]
gi|226515937|gb|ACO61932.1| predicted protein [Micromonas sp. RCC299]
Length = 440
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 88/178 (49%), Gaps = 21/178 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQ---GPQSEGDSSNTT 57
+ EMNGV C SR MRI A PRK P+ E N+T
Sbjct: 168 LVEMNGVPCGSRVMRISLAIPRKGVDGVGGGGVGSNTGVGSNGVGGSPAPEPE----NST 223
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIG 117
+FVGGLDP +T+ DLR F +GE+ VKIP GKGCGFVQF R +AE ++ LNGT++G
Sbjct: 224 VFVGGLDPTLTEPDLRTHFEAFGELVYVKIPAGKGCGFVQFTRRADAEASIQALNGTMMG 283
Query: 118 KQSFRADY-------GNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPVY 168
R + G + +G + GG Y G Y PP A A AYG P +
Sbjct: 284 ASRVRLSWVRSGGGGGGRHTGPFGGGSPY-GMPYGGYPP------YAMAGAYGVDPSW 334
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T++VG L + + L F+ +G I SVKI K G GFV+F +R AE AL
Sbjct: 14 TLWVGDLGYWMEESYLHTCFAHFGAIGSVKIIRNKQTGFSEGYGFVEFVDRATAEHALKT 73
Query: 111 LNGTVI--GKQSFRADY 125
LNGT + Q+FR ++
Sbjct: 74 LNGTPMPSAHQNFRLNW 90
Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQFANRENAEE 106
++ ++FVG L P V D L++ F++ Y + + ++ KG GFV+F + +
Sbjct: 107 NDHSVFVGDLPPEVNDYALQETFAERYPSVRNARVVTDPNTGRSKGFGFVRFGDEGERDR 166
Query: 107 ALHKLNGTVIGKQSFR 122
AL ++NG G + R
Sbjct: 167 ALVEMNGVPCGSRVMR 182
>gi|70982362|ref|XP_746709.1| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
fumigatus Af293]
gi|66844333|gb|EAL84671.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus fumigatus Af293]
gi|159123048|gb|EDP48168.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus fumigatus A1163]
Length = 418
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/138 (45%), Positives = 77/138 (55%), Gaps = 12/138 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKS-----SGYQQQYSSQGGYASNGAPGQG----PQSEG 51
+TEM GVYC +RPMRI ATP+ G G Y GAP G PQ
Sbjct: 220 LTEMQGVYCGNRPMRISTATPKNKGPGVVPGAMGMPGPAGMYPPMGAPPMGFYGAPQPMN 279
Query: 52 ---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A+
Sbjct: 280 QFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAI 339
Query: 109 HKLNGTVIGKQSFRADYG 126
+++ G IG R +G
Sbjct: 340 NQMQGYPIGNSRVRLSWG 357
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Query: 41 GAPGQGPQSE-GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----- 94
G P P ++ G+ TT+++G L+P + + +R + Q GE +VK+ K G
Sbjct: 51 GEPSAAPVAQQGNEGKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGY 110
Query: 95 -FVQFANRENAEEALHKLNGT 114
FV F++ A +AL LNGT
Sbjct: 111 CFVDFSSPAAAAKAL-SLNGT 130
>gi|345561228|gb|EGX44324.1| hypothetical protein AOL_s00193g52 [Arthrobotrys oligospora ATCC
24927]
Length = 461
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 80/140 (57%), Gaps = 14/140 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQY-------SSQGGYASNGAPGQG----PQS 49
+TEM GVYC +RPMRI ATP+ G Q + Q G + GAP G PQ
Sbjct: 209 LTEMQGVYCGNRPMRISTATPKNKGGNQGMMQQGMGGMAPQMGMYTMGAPTMGYYGAPQP 268
Query: 50 EG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEE 106
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE
Sbjct: 269 MNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEM 328
Query: 107 ALHKLNGTVIGKQSFRADYG 126
A++++ G IG R +G
Sbjct: 329 AINQMQGYPIGNSRVRLSWG 348
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 15/113 (13%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ ++S GG A +GP+ +IFVG L P V + L F
Sbjct: 119 GTQIPNSNRPFKLNWASGGGLADR-RDDRGPE-------YSIFVGDLGPEVNEFVLVSLF 170
Query: 77 S-QYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
++ S KI P+ +G GFV+FA+ + + AL ++ G G + R
Sbjct: 171 QGRFQSCKSAKIMTDPISGMSRGYGFVRFADEMDQQRALTEMQGVYCGNRPMR 223
Score = 36.2 bits (82), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK-----GCGFVQFANREN 103
+ G+ + TT+++G L+P + + +R + GE +VK+ K G FV F + +
Sbjct: 51 ANGNDAKTTLWMGELEPWIDENFIRSVWYSLGEQVNVKMIRDKFNGSAGYCFVDFTSPQA 110
Query: 104 AEEALHKLNGTVI 116
A +AL LNGT I
Sbjct: 111 AAKAL-ALNGTQI 122
>gi|119489215|ref|XP_001262859.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Neosartorya fischeri NRRL 181]
gi|119411017|gb|EAW20962.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Neosartorya fischeri NRRL 181]
Length = 417
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/138 (45%), Positives = 77/138 (55%), Gaps = 12/138 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKS-----SGYQQQYSSQGGYASNGAPGQG----PQSEG 51
+TEM GVYC +RPMRI ATP+ G G Y GAP G PQ
Sbjct: 219 LTEMQGVYCGNRPMRISTATPKNKGPGVVPGAMGMPGPAGMYPPMGAPPMGFYGAPQPMN 278
Query: 52 ---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A+
Sbjct: 279 QFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAI 338
Query: 109 HKLNGTVIGKQSFRADYG 126
+++ G IG R +G
Sbjct: 339 NQMQGYPIGNSRVRLSWG 356
>gi|452982866|gb|EME82624.1| hypothetical protein MYCFIDRAFT_51313 [Pseudocercospora fijiensis
CIRAD86]
Length = 414
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/141 (46%), Positives = 79/141 (56%), Gaps = 15/141 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQ--------QQYSSQGGYASNGAPGQG----PQ 48
+ EM GVYC +RPMRI ATP+ SG QQ G S GAP G PQ
Sbjct: 234 LHEMQGVYCGNRPMRISTATPKNKSGGAGGPGMGGMQQVPGGQGMYSMGAPPMGYYGAPQ 293
Query: 49 SEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAE 105
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE
Sbjct: 294 PMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAE 353
Query: 106 EALHKLNGTVIGKQSFRADYG 126
A++++ G IG R +G
Sbjct: 354 MAINQMQGYPIGNSRVRLSWG 374
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 14/113 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ ++S GG A +GP+ +IFVG L P V + L F
Sbjct: 143 GQMIPNSNRQFKLNWASGGGLADRSRDDRGPE-------YSIFVGDLGPEVNEYVLMSLF 195
Query: 77 -SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
++Y S KI P+ +G GFV+FA+ + ++ALH++ G G + R
Sbjct: 196 QNKYPSCKSAKIMSDPISGMSRGYGFVRFADETDQQKALHEMQGVYCGNRPMR 248
>gi|358374531|dbj|GAA91122.1| mRNA binding post-transcriptional regulator [Aspergillus kawachii
IFO 4308]
Length = 402
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/139 (44%), Positives = 79/139 (56%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK------SSGYQQQYSSQGGYASNGAPGQG----PQSE 50
++EM GVYC +RPMRI ATP+ ++G G Y GAP G PQ
Sbjct: 219 LSEMQGVYCGNRPMRISTATPKNKGPSLGAAGAMGMPGPAGMYPPMGAPPMGFYGAPQPM 278
Query: 51 G---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A
Sbjct: 279 NQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMA 338
Query: 108 LHKLNGTVIGKQSFRADYG 126
++++ G IG R +G
Sbjct: 339 INQMQGYPIGNSRVRLSWG 357
>gi|350637619|gb|EHA25976.1| hypothetical protein ASPNIDRAFT_212792 [Aspergillus niger ATCC
1015]
Length = 403
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/139 (44%), Positives = 79/139 (56%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK------SSGYQQQYSSQGGYASNGAPGQG----PQSE 50
++EM GVYC +RPMRI ATP+ ++G G Y GAP G PQ
Sbjct: 220 LSEMQGVYCGNRPMRISTATPKNKGPSLGAAGAMGMPGPAGMYPPMGAPPMGFYGAPQPM 279
Query: 51 G---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A
Sbjct: 280 NQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMA 339
Query: 108 LHKLNGTVIGKQSFRADYG 126
++++ G IG R +G
Sbjct: 340 INQMQGYPIGNSRVRLSWG 358
>gi|317033242|ref|XP_001395129.2| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
niger CBS 513.88]
gi|317033244|ref|XP_003188853.1| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
niger CBS 513.88]
Length = 399
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/139 (44%), Positives = 79/139 (56%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK------SSGYQQQYSSQGGYASNGAPGQG----PQSE 50
++EM GVYC +RPMRI ATP+ ++G G Y GAP G PQ
Sbjct: 220 LSEMQGVYCGNRPMRISTATPKNKGPSLGAAGAMGMPGPAGMYPPMGAPPMGFYGAPQPM 279
Query: 51 G---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A
Sbjct: 280 NQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMA 339
Query: 108 LHKLNGTVIGKQSFRADYG 126
++++ G IG R +G
Sbjct: 340 INQMQGYPIGNSRVRLSWG 358
>gi|134079837|emb|CAK40970.1| unnamed protein product [Aspergillus niger]
Length = 402
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/139 (44%), Positives = 79/139 (56%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK------SSGYQQQYSSQGGYASNGAPGQG----PQSE 50
++EM GVYC +RPMRI ATP+ ++G G Y GAP G PQ
Sbjct: 219 LSEMQGVYCGNRPMRISTATPKNKGPSLGAAGAMGMPGPAGMYPPMGAPPMGFYGAPQPM 278
Query: 51 G---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A
Sbjct: 279 NQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMA 338
Query: 108 LHKLNGTVIGKQSFRADYG 126
++++ G IG R +G
Sbjct: 339 INQMQGYPIGNSRVRLSWG 357
>gi|296412343|ref|XP_002835884.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629680|emb|CAZ80041.1| unnamed protein product [Tuber melanosporum]
Length = 412
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 74/127 (58%), Gaps = 17/127 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSE-GDSSNTTIF 59
+TEM GVYC +RPMRI ATP+ S A G P ++ D +NTT+F
Sbjct: 195 LTEMQGVYCGNRPMRISTATPKNKS----------------ATGGPPMNQFTDPNNTTVF 238
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQ 119
VGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A++++ G IG
Sbjct: 239 VGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNS 298
Query: 120 SFRADYG 126
R +G
Sbjct: 299 RVRLSWG 305
>gi|30682335|ref|NP_849641.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332190644|gb|AEE28765.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 306
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 67/102 (65%), Gaps = 10/102 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK-SSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIF 59
MTEMNGV CS+RPMRIG A +K +G + Y S G ++ D +NTT+F
Sbjct: 214 MTEMNGVPCSTRPMRIGPAASKKGVTGQRDSYQSSAA---------GVTTDNDPNNTTVF 264
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANR 101
VGGLD +VTD+ L+ FSQYGEI VKIP GK CGFVQF+ +
Sbjct: 265 VGGLDASVTDDHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEK 306
Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFANRENA 104
DS + TIFVG L +VTD L + F + Y + K+ + KG GFV+F++
Sbjct: 151 DSPDYTIFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQ 210
Query: 105 EEALHKLNGTVIGKQSFR 122
A+ ++NG + R
Sbjct: 211 IRAMTEMNGVPCSTRPMR 228
>gi|380478379|emb|CCF43635.1| RNA recognition domain-containing protein, partial [Colletotrichum
higginsianum]
Length = 419
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 81/154 (52%), Gaps = 28/154 (18%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSG----YQQQYSSQ---------------------- 34
+ EM GVYC +RPMRI ATP+ S YQQ + +Q
Sbjct: 211 LVEMQGVYCGNRPMRISTATPKNRSNHGGPYQQHHGNQMMAPGLPPHQQGFYGVPSPAQY 270
Query: 35 -GGY-ASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG 92
G Y A PGQ D +NTT+FVGGL VT+++LR F +GEI VKIP GKG
Sbjct: 271 GGAYGAPYNPPGQQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKG 330
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
CGFVQF +R AE A++++ G IG R +G
Sbjct: 331 CGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWG 364
>gi|301107790|ref|XP_002902977.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262098095|gb|EEY56147.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 382
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 71/116 (61%), Gaps = 15/116 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ MNGVYCSSRPMR+ AT R S Q ++ E + +NTT+FV
Sbjct: 155 LQTMNGVYCSSRPMRVSVATERNKSRQQVGFT---------------MGEEEGTNTTVFV 199
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
GGLDP T+++LR F G I SVK+P G+GCGFVQ++++E AE A+ ++NG +
Sbjct: 200 GGLDPATTEDELRARFGALGAIVSVKVPPGRGCGFVQYSSKEAAEVAISQMNGQAV 255
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PV---GKGCGFVQFANRENAE 105
S + +IFVG L P+VTDE L F +++ + K+ PV KG GFV+F ++E A+
Sbjct: 93 SDDHSIFVGDLAPDVTDELLLATFNARFTTVRGAKVVMDPVTRMSKGFGFVRFGSKEEAD 152
Query: 106 EALHKLNGTVIGKQSFRADYGNQ 128
+AL +NG + R +
Sbjct: 153 QALQTMNGVYCSSRPMRVSVATE 175
>gi|121709146|ref|XP_001272322.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus clavatus NRRL 1]
gi|119400471|gb|EAW10896.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus clavatus NRRL 1]
Length = 417
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 75/138 (54%), Gaps = 12/138 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG-----YASNGAPGQG----PQSEG 51
+TEM GVYC +RPMRI ATP+ Y GAP G PQ
Sbjct: 219 LTEMQGVYCGNRPMRISTATPKNKGPGVVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMN 278
Query: 52 ---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A+
Sbjct: 279 QFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAI 338
Query: 109 HKLNGTVIGKQSFRADYG 126
+++ G IG R +G
Sbjct: 339 NQMQGYPIGNSRVRLSWG 356
>gi|409079460|gb|EKM79821.1| hypothetical protein AGABI1DRAFT_57019, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 366
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/132 (43%), Positives = 77/132 (58%), Gaps = 7/132 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR--KSSGYQQQYSSQGGYASNGAPGQGPQ----SEGDSS 54
+ EM+G+YC SRPMRI AT + +SG YS Q S P Q + D
Sbjct: 170 LIEMHGLYCLSRPMRISPATAKFKPASGVSLDYS-QAPPFSAPLPNVDNQPVTLTSNDPY 228
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
NTT+FVGGL P +++E LR F+ +G+I VK+PVGK CGFVQF + +AE A+ K+ G
Sbjct: 229 NTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKADAERAIEKMQGF 288
Query: 115 VIGKQSFRADYG 126
IG R +G
Sbjct: 289 PIGGSRIRLSWG 300
>gi|302841234|ref|XP_002952162.1| hypothetical protein VOLCADRAFT_32547 [Volvox carteri f.
nagariensis]
gi|300262427|gb|EFJ46633.1| hypothetical protein VOLCADRAFT_32547 [Volvox carteri f.
nagariensis]
Length = 193
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 78/130 (60%), Gaps = 3/130 (2%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSG---YQQQYSSQGGYASNGAPGQGPQSEGDSSNTT 57
+ EMNGV+ SSRP+R+ AT R+ G S G G G G E D +NTT
Sbjct: 63 VVEMNGVFISSRPVRVSVATARRIDGGPLVPGGGSRVPGSGPGGGGGGGALGEADPNNTT 122
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIG 117
+F+GGL VT++ LR F +YGEI KIP GKGCGFVQF +R+ AE A+ ++NG +IG
Sbjct: 123 LFIGGLSSGVTEDQLRGVFGRYGEIIYTKIPPGKGCGFVQFIDRQAAEYAMQEVNGQIIG 182
Query: 118 KQSFRADYGN 127
S R +G
Sbjct: 183 GSSVRISWGK 192
Score = 39.3 bits (90), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYG-EIASVKI---PV---GKGCGFVQFANRENAE 105
+++ ++FVG L P V D L F QY + S K+ PV KG GFV+F + +
Sbjct: 1 AADFSLFVGDLPPEVHDHFLESFFRQYFPSVRSAKVMTDPVTGRSKGYGFVRFGSEAERD 60
Query: 106 EALHKLNGTVIGKQSFRA 123
A+ ++NG I + R
Sbjct: 61 RAVVEMNGVFISSRPVRV 78
>gi|310798962|gb|EFQ33855.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 419
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 81/154 (52%), Gaps = 28/154 (18%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSG---YQQQYS------------SQGGY-------- 37
+ EM GVYC +RPMRI ATP+ + YQQQ+ QG Y
Sbjct: 211 LVEMQGVYCGNRPMRISTATPKNRNHGGPYQQQHHGNQMMAPGLPPHQQGFYGVPSPAQY 270
Query: 38 -----ASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG 92
A PGQ D +NTT+FVGGL VT+++LR F +GEI VKIP GKG
Sbjct: 271 GGAYGAPYNPPGQQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKG 330
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
CGFVQF +R AE A++++ G IG R +G
Sbjct: 331 CGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWG 364
>gi|396480654|ref|XP_003841045.1| hypothetical protein LEMA_P089750.1 [Leptosphaeria maculans JN3]
gi|312217619|emb|CBX97566.1| hypothetical protein LEMA_P089750.1 [Leptosphaeria maculans JN3]
Length = 433
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/143 (44%), Positives = 78/143 (54%), Gaps = 17/143 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYA----------SNGAPGQG---- 46
+TEM GVYC +RPMRI ATP+ SG G S GAP G
Sbjct: 224 LTEMQGVYCGNRPMRISTATPKNKSGGPGGPGGMGMPQQGGGPGMGMYSMGAPPMGYYGA 283
Query: 47 PQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANREN 103
PQ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R
Sbjct: 284 PQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHA 343
Query: 104 AEEALHKLNGTVIGKQSFRADYG 126
AE A++++ G IG R +G
Sbjct: 344 AEMAINQMQGYPIGNSRVRLSWG 366
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 14/113 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ ++S GG A +GP+ +IFVG L P VT+ L Q F
Sbjct: 133 GQLIPNSNRPFKLNWASGGGLADRSRDERGPE-------YSIFVGDLGPEVTEFVLVQLF 185
Query: 77 -SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
++Y S KI P+ +G GFV+FA+ E+ ++AL ++ G G + R
Sbjct: 186 QNKYPSTKSAKIMSDPISGMSRGYGFVRFASEEDQQKALTEMQGVYCGNRPMR 238
>gi|83774240|dbj|BAE64365.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 488
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 75/138 (54%), Gaps = 12/138 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG-----YASNGAPGQG----PQSEG 51
++EM GVYC +RPMRI ATP+ Y GAP G PQ
Sbjct: 217 LSEMQGVYCGNRPMRISTATPKNKGPGVVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMN 276
Query: 52 ---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A+
Sbjct: 277 QFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAI 336
Query: 109 HKLNGTVIGKQSFRADYG 126
+++ G IG R +G
Sbjct: 337 NQMQGYPIGNSRVRLSWG 354
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 41 GAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG------ 94
G P P TT+++G L+P + + +R + Q GE +VK+ K G
Sbjct: 49 GEPTAAPVQPAQEGKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYC 108
Query: 95 FVQFANRENAEEALHKLNGT 114
FV F++ A +AL LNGT
Sbjct: 109 FVDFSSPAAAAKAL-SLNGT 127
>gi|367019444|ref|XP_003659007.1| hypothetical protein MYCTH_2087998 [Myceliophthora thermophila ATCC
42464]
gi|347006274|gb|AEO53762.1| hypothetical protein MYCTH_2087998 [Myceliophthora thermophila ATCC
42464]
Length = 396
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 83/151 (54%), Gaps = 28/151 (18%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASN--------------GAP--- 43
+ EM GVYC +RPMRI ATP+ S QY G +N GAP
Sbjct: 192 LVEMQGVYCGNRPMRISTATPKTRS---HQYGGAHGQGANPMIPPVPGHPGPMWGAPAYY 248
Query: 44 GQG-------PQSE-GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGF 95
GQG P ++ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGF
Sbjct: 249 GQGAAFNPMQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGF 308
Query: 96 VQFANRENAEEALHKLNGTVIGKQSFRADYG 126
VQF +R AE A++++ G IG R +G
Sbjct: 309 VQFVHRHAAEMAINQMQGYPIGNSRVRLSWG 339
>gi|238498926|ref|XP_002380698.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus flavus NRRL3357]
gi|220693972|gb|EED50317.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus flavus NRRL3357]
Length = 427
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 75/138 (54%), Gaps = 12/138 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG-----YASNGAPGQG----PQSEG 51
++EM GVYC +RPMRI ATP+ Y GAP G PQ
Sbjct: 241 LSEMQGVYCGNRPMRISTATPKNKGPGVVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMN 300
Query: 52 ---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A+
Sbjct: 301 QFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAI 360
Query: 109 HKLNGTVIGKQSFRADYG 126
+++ G IG R +G
Sbjct: 361 NQMQGYPIGNSRVRLSWG 378
>gi|342875796|gb|EGU77504.1| hypothetical protein FOXB_11986 [Fusarium oxysporum Fo5176]
Length = 405
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 80/148 (54%), Gaps = 22/148 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAATP--RKSSGYQQQYSSQGGYASNGAPGQ------------- 45
+ EM GVYC +RPMRI ATP R + G+ Q GG G P Q
Sbjct: 196 LVEMQGVYCGNRPMRISTATPKNRGNHGFGGQGHHNGGPMMGGMPQQQMWNGGGMQGFGY 255
Query: 46 ---GPQSE----GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
P ++ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF
Sbjct: 256 GGFNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQF 315
Query: 99 ANRENAEEALHKLNGTVIGKQSFRADYG 126
+R AE A++++ G IG R +G
Sbjct: 316 VHRHAAEMAINQMQGYPIGNSRVRLSWG 343
>gi|317155988|ref|XP_001825498.2| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
oryzae RIB40]
Length = 404
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 75/138 (54%), Gaps = 12/138 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG-----YASNGAPGQG----PQSEG 51
++EM GVYC +RPMRI ATP+ Y GAP G PQ
Sbjct: 218 LSEMQGVYCGNRPMRISTATPKNKGPGVVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMN 277
Query: 52 ---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A+
Sbjct: 278 QFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAI 337
Query: 109 HKLNGTVIGKQSFRADYG 126
+++ G IG R +G
Sbjct: 338 NQMQGYPIGNSRVRLSWG 355
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Query: 41 GAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG------ 94
G P P TT+++G L+P + + +R + Q GE +VK+ K G
Sbjct: 49 GEPTAAPVQPAQEGKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGRSNAGY 108
Query: 95 -FVQFANRENAEEALHKLNGT 114
FV F++ A +AL LNGT
Sbjct: 109 CFVDFSSPAAAAKAL-SLNGT 128
>gi|391868084|gb|EIT77307.1| RRM domain protein [Aspergillus oryzae 3.042]
Length = 395
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 75/138 (54%), Gaps = 12/138 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG-----YASNGAPGQG----PQSEG 51
++EM GVYC +RPMRI ATP+ Y GAP G PQ
Sbjct: 217 LSEMQGVYCGNRPMRISTATPKNKGPGVVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMN 276
Query: 52 ---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A+
Sbjct: 277 QFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAI 336
Query: 109 HKLNGTVIGKQSFRADYG 126
+++ G IG R +G
Sbjct: 337 NQMQGYPIGNSRVRLSWG 354
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 41 GAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG------ 94
G P P TT+++G L+P + + +R + Q GE +VK+ K G
Sbjct: 49 GEPTAAPVQPAQEGKTTLWMGELEPWIDENFVRNLWFQMGEQVNVKMIRDKFSGSNAGYC 108
Query: 95 FVQFANRENAEEALHKLNGT 114
FV F++ A +AL LNGT
Sbjct: 109 FVDFSSPAAAAKAL-SLNGT 127
>gi|171695760|ref|XP_001912804.1| hypothetical protein [Podospora anserina S mat+]
gi|170948122|emb|CAP60286.1| unnamed protein product [Podospora anserina S mat+]
Length = 390
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 76/138 (55%), Gaps = 12/138 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQG---------GYASNGAPGQGPQSEG 51
+ EM GVYC +RPMRI ATP+ +Q GYA AP Q
Sbjct: 193 LVEMQGVYCGNRPMRISTATPKTRYMMPPVPGAQAPMWGGVPPYGYAQPAAPFNPMQPMN 252
Query: 52 ---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF +R AE A+
Sbjct: 253 QFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAI 312
Query: 109 HKLNGTVIGKQSFRADYG 126
+++ G IG R +G
Sbjct: 313 NQMQGYPIGNSRVRLSWG 330
>gi|402077003|gb|EJT72352.1| tRNA selenocysteine-associated protein 1 [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 423
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 83/157 (52%), Gaps = 33/157 (21%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY----------------------- 37
+ EM GVYC +RPMRI ATP+ S QQYS+QG +
Sbjct: 195 LLEMQGVYCGNRPMRISTATPKTRS--HQQYSAQGQHGGPMPMAAPAQQQNMNWGMPYGF 252
Query: 38 -------ASNGAPGQGPQSE-GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
A+N P ++ D +NTT+FVGGL VT+++LR F +G+I VKIP
Sbjct: 253 NQPAPPAANNFNAAMQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGDITYVKIPP 312
Query: 90 GKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
GKGCGFVQF +R AE A++++ G IG R +G
Sbjct: 313 GKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWG 349
>gi|440636370|gb|ELR06289.1| hypothetical protein, variant [Geomyces destructans 20631-21]
gi|440636371|gb|ELR06290.1| hypothetical protein GMDG_07882 [Geomyces destructans 20631-21]
Length = 411
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 80/146 (54%), Gaps = 20/146 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQG-------------GYASNGAPGQG- 46
+TEM GVYC +RPMRI ATP+ SG + G G S GAP G
Sbjct: 226 LTEMQGVYCGNRPMRISTATPKNKSGGGGPPGAMGGMPGAPMGGNMAPGMYSMGAPPIGY 285
Query: 47 ---PQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
PQ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF
Sbjct: 286 YGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQ 345
Query: 101 RENAEEALHKLNGTVIGKQSFRADYG 126
R AE A++++ G IG R +G
Sbjct: 346 RHAAEMAINQMQGYPIGNSRVRLSWG 371
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG-----FVQF 98
GQG + S TT+++G L+P + + +R + GE +VK+ K G F+ F
Sbjct: 63 GQGGSTGAADSKTTLWMGELEPWIDENFVRSVWFGMGEQVNVKMIRDKFSGNAGYCFIDF 122
Query: 99 ANRENAEEALHKLNGTVIGKQS--FRADY 125
E A +AL LNG++I S F+ ++
Sbjct: 123 TTPEAAAKAL-SLNGSMIPNTSRPFKLNW 150
>gi|330935675|ref|XP_003305076.1| hypothetical protein PTT_17823 [Pyrenophora teres f. teres 0-1]
gi|311318022|gb|EFQ86789.1| hypothetical protein PTT_17823 [Pyrenophora teres f. teres 0-1]
Length = 471
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 78/144 (54%), Gaps = 18/144 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG-----------YASNGAPGQG--- 46
+TEM GVYC +RPMRI ATP+ SG G Y+ N P G
Sbjct: 216 LTEMQGVYCGNRPMRISTATPKNKSGGPGGPGGMGMPQGGGGPGMGMYSMNAPPMGGYYG 275
Query: 47 -PQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRE 102
PQ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R
Sbjct: 276 TPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRH 335
Query: 103 NAEEALHKLNGTVIGKQSFRADYG 126
AE A++++ G IG R +G
Sbjct: 336 AAEMAINQMQGYPIGNSRVRLSWG 359
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 16/113 (14%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G+ P + ++ ++S GG A +GP+ ++FVG L P VT+ L Q F
Sbjct: 127 GSLIPNSNRPFKLNWASGGGLADRRQ--RGPE-------FSVFVGDLGPEVTEFVLVQLF 177
Query: 77 -SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
++Y S KI P+ +G GFV+FA+ ++ ++AL ++ G G + R
Sbjct: 178 QNKYASTKSAKIMSDPISGMSRGYGFVRFASEDDQQKALTEMQGVYCGNRPMR 230
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG------FVQFANRENAEEALH 109
TT+++G L+P + + +R + GE +VK+ K G FV FA+ + A +AL
Sbjct: 65 TTLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSGSNAGYCFVDFASPDAAAKALG 124
Query: 110 KLNGTVI 116
LNG++I
Sbjct: 125 -LNGSLI 130
>gi|67904206|ref|XP_682359.1| hypothetical protein AN9090.2 [Aspergillus nidulans FGSC A4]
gi|40742733|gb|EAA61923.1| hypothetical protein AN9090.2 [Aspergillus nidulans FGSC A4]
gi|67043519|gb|AAY63883.1| putative RNA binding protein [Emericella nidulans]
gi|259485498|tpe|CBF82571.1| TPA: Putative RNA binding proteinPutative uncharacterized protein ;
[Source:UniProtKB/TrEMBL;Acc:Q5ARJ0] [Aspergillus
nidulans FGSC A4]
Length = 393
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 75/138 (54%), Gaps = 12/138 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG-----YASNGAPGQG----PQSEG 51
++EM GVYC +RPMRI ATP+ Y GAP G PQ
Sbjct: 219 LSEMQGVYCGNRPMRISTATPKNKGPGVVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMN 278
Query: 52 ---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A+
Sbjct: 279 QFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAI 338
Query: 109 HKLNGTVIGKQSFRADYG 126
+++ G IG R +G
Sbjct: 339 NQMQGYPIGNSRVRLSWG 356
>gi|189197507|ref|XP_001935091.1| mRNA binding post-transcriptional regulator (Csx1) [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187981039|gb|EDU47665.1| mRNA binding post-transcriptional regulator (Csx1) [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 490
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 78/144 (54%), Gaps = 18/144 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG-----------YASNGAPGQG--- 46
+TEM GVYC +RPMRI ATP+ SG G Y+ N P G
Sbjct: 235 LTEMQGVYCGNRPMRISTATPKNKSGGPGGPGGMGMPQGGGGPGMGMYSMNAPPMGGYYG 294
Query: 47 -PQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRE 102
PQ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R
Sbjct: 295 TPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRH 354
Query: 103 NAEEALHKLNGTVIGKQSFRADYG 126
AE A++++ G IG R +G
Sbjct: 355 AAEMAINQMQGYPIGNSRVRLSWG 378
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 7/73 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALH 109
++FVG L P VT+ L Q F ++Y S KI P+ +G GFV+FA+ ++ ++AL
Sbjct: 177 SVFVGDLGPEVTEFVLVQLFQNKYASTKSAKIMSDPISGMSRGYGFVRFASEDDQQKALT 236
Query: 110 KLNGTVIGKQSFR 122
++ G G + R
Sbjct: 237 EMQGVYCGNRPMR 249
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG------FVQFANRENAEEALH 109
TT+++G L+P + + +R + GE +VK+ K G FV FA+ + A +AL
Sbjct: 65 TTLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSGSNAGYCFVDFASPDAAAKAL- 123
Query: 110 KLNGTVI 116
LNG++I
Sbjct: 124 SLNGSLI 130
>gi|302893889|ref|XP_003045825.1| hypothetical protein NECHADRAFT_66100 [Nectria haematococca mpVI
77-13-4]
gi|256726752|gb|EEU40112.1| hypothetical protein NECHADRAFT_66100 [Nectria haematococca mpVI
77-13-4]
Length = 408
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 76/146 (52%), Gaps = 20/146 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGY--------------------QQQYSSQGGYASN 40
+ EM GVYC +RPMRI ATP+ + QQ ++ G+
Sbjct: 202 LVEMQGVYCGNRPMRISTATPKNRGNHGFGHGQHNGGPMMGGGVMPQQQMWNGAQGFYGG 261
Query: 41 GAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
P D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF +
Sbjct: 262 FNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVH 321
Query: 101 RENAEEALHKLNGTVIGKQSFRADYG 126
R AE A++++ G IG R +G
Sbjct: 322 RHAAEMAINQMQGYPIGNSRVRLSWG 347
>gi|350295821|gb|EGZ76798.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 523
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 82/151 (54%), Gaps = 28/151 (18%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASN---------------GAPGQ 45
+ EM GVYC +RPMRI ATP+ + QY + +A+N G P Q
Sbjct: 227 LVEMQGVYCGNRPMRISTATPKTRT---HQYGAHAPHAANPMMAPVPAHATNLQWGVPPQ 283
Query: 46 G---------PQSE-GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGF 95
P ++ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGF
Sbjct: 284 PYYSGFNPMQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGF 343
Query: 96 VQFANRENAEEALHKLNGTVIGKQSFRADYG 126
VQF +R AE A++++ G IG R +G
Sbjct: 344 VQFVHRHAAEMAINQMQGYPIGNSRVRLSWG 374
>gi|336463751|gb|EGO51991.1| hypothetical protein NEUTE1DRAFT_149626 [Neurospora tetrasperma
FGSC 2508]
Length = 491
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 82/151 (54%), Gaps = 28/151 (18%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASN---------------GAPGQ 45
+ EM GVYC +RPMRI ATP+ + QY + +A+N G P Q
Sbjct: 195 LVEMQGVYCGNRPMRISTATPKTRT---HQYGAHAPHAANPMMAPVPAHATNLQWGVPPQ 251
Query: 46 G---------PQSE-GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGF 95
P ++ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGF
Sbjct: 252 PYYSGFNPMQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGF 311
Query: 96 VQFANRENAEEALHKLNGTVIGKQSFRADYG 126
VQF +R AE A++++ G IG R +G
Sbjct: 312 VQFVHRHAAEMAINQMQGYPIGNSRVRLSWG 342
>gi|85115744|ref|XP_964924.1| hypothetical protein NCU00768 [Neurospora crassa OR74A]
gi|28926722|gb|EAA35688.1| conserved hypothetical protein [Neurospora crassa OR74A]
gi|38636412|emb|CAE81949.1| related to polyadenylate-binding protein [Neurospora crassa]
Length = 491
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 82/151 (54%), Gaps = 28/151 (18%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASN---------------GAPGQ 45
+ EM GVYC +RPMRI ATP+ + QY + +A+N G P Q
Sbjct: 195 LVEMQGVYCGNRPMRISTATPKTRT---HQYGAHAPHAANPMMAPVPAHATNLQWGVPPQ 251
Query: 46 G---------PQSE-GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGF 95
P ++ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGF
Sbjct: 252 PYYSGFNPMQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGF 311
Query: 96 VQFANRENAEEALHKLNGTVIGKQSFRADYG 126
VQF +R AE A++++ G IG R +G
Sbjct: 312 VQFVHRHAAEMAINQMQGYPIGNSRVRLSWG 342
>gi|336275731|ref|XP_003352619.1| hypothetical protein SMAC_01453 [Sordaria macrospora k-hell]
gi|380094509|emb|CCC07889.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 517
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 78/151 (51%), Gaps = 28/151 (18%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGA------------------ 42
+ EM GVYC +RPMRI ATP+ + QY + +A+N
Sbjct: 195 LVEMQGVYCGNRPMRISTATPKTRT---HQYGAHAPHAANAMMAPVPAHAANMQWGVPPQ 251
Query: 43 -------PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGF 95
P Q D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGF
Sbjct: 252 PYYSGFNPMQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGF 311
Query: 96 VQFANRENAEEALHKLNGTVIGKQSFRADYG 126
VQF +R AE A++++ G IG R +G
Sbjct: 312 VQFVHRHAAEMAINQMQGYPIGNSRVRLSWG 342
>gi|261199113|ref|XP_002625958.1| mRNA binding post-transcriptional regulator [Ajellomyces
dermatitidis SLH14081]
gi|239595110|gb|EEQ77691.1| mRNA binding post-transcriptional regulator [Ajellomyces
dermatitidis SLH14081]
gi|327353834|gb|EGE82691.1| hypothetical protein BDDG_05635 [Ajellomyces dermatitidis ATCC
18188]
Length = 399
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 75/140 (53%), Gaps = 14/140 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG-------YASNGAPGQG----PQS 49
+TEM GVYC +RPMRI ATP+ + Y G P G PQ
Sbjct: 218 LTEMQGVYCGNRPMRISTATPKNKGPGAGPGAMGMPGAGPAGMYPPMGGPPMGYYGAPQP 277
Query: 50 EG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEE 106
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE
Sbjct: 278 MNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEM 337
Query: 107 ALHKLNGTVIGKQSFRADYG 126
A++++ G IG R +G
Sbjct: 338 AINQMQGYPIGNSRVRLSWG 357
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 14/113 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P S ++ ++S GG A +GP+ +IFVG L P V + L F
Sbjct: 127 GTPIPNTSRTFKLNWASGGGLADRSREERGPE-------FSIFVGDLGPEVNEYVLVSLF 179
Query: 77 -SQYGEIASVKI---PV---GKGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
S++ S KI P+ +G GFV+F++ + + AL ++ G G + R
Sbjct: 180 QSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMR 232
Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 39 SNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG---- 94
++G P +G + TT+++G L+P + + +R + Q GE +VK+ K G
Sbjct: 48 ASGEPAPSSAQQGGEAKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAG 107
Query: 95 --FVQFANRENAEEALHKLNGTVI--GKQSFRADY 125
FV F A +AL L+GT I ++F+ ++
Sbjct: 108 YCFVDFTTPAAAAKAL-TLSGTPIPNTSRTFKLNW 141
>gi|398412748|ref|XP_003857692.1| hypothetical protein MYCGRDRAFT_65137 [Zymoseptoria tritici IPO323]
gi|339477577|gb|EGP92668.1| hypothetical protein MYCGRDRAFT_65137 [Zymoseptoria tritici IPO323]
Length = 437
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 77/146 (52%), Gaps = 20/146 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYA-------------SNGAPGQG- 46
+ EM GVYC +RPMRI ATP+ SG G S GAP G
Sbjct: 225 LHEMQGVYCGNRPMRISTATPKNKSGAGGPGGMPGMGPPGGPGGNPNMGMYSMGAPPMGY 284
Query: 47 ---PQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
PQ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF
Sbjct: 285 YGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQ 344
Query: 101 RENAEEALHKLNGTVIGKQSFRADYG 126
R AE A++++ G IG R +G
Sbjct: 345 RHAAEMAINQMQGYPIGNSRVRLSWG 370
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 15/121 (12%)
Query: 10 SSRPMRI-GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVT 68
++R +++ G P + ++ ++S GG A +GP+ +IFVG L P V
Sbjct: 126 ATRALQLNGQVIPNSNRQFKLNWASGGGLADRSRDDRGPE-------FSIFVGDLGPEVN 178
Query: 69 DEDLRQPFS-QYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSF 121
+ L F +Y S KI P+ +G GFV+FA+ ++ ++ALH++ G G +
Sbjct: 179 EYVLMSLFQGKYTSCKSAKIMSDPISGMSRGYGFVRFADEQDQQKALHEMQGVYCGNRPM 238
Query: 122 R 122
R
Sbjct: 239 R 239
>gi|453086344|gb|EMF14386.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 425
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 77/150 (51%), Gaps = 24/150 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSG-----------------YQQQYSSQGGYASNGAP 43
+ EM GVYC +RPMRI ATP+ SG G S GAP
Sbjct: 236 LHEMQGVYCGNRPMRISTATPKNKSGGAAVPPGGMPQPGMPGGPAAGGPQMPGMYSMGAP 295
Query: 44 GQG----PQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFV 96
G PQ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFV
Sbjct: 296 PMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFV 355
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADYG 126
QF R AE A++++ G IG R +G
Sbjct: 356 QFVQRHAAEMAINQMQGYPIGNSRVRLSWG 385
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 14/113 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ ++S GG A +GP+ +IFVG L P V + L F
Sbjct: 145 GQVIPNSNRQFKLNWASGGGLADRSRDDRGPE-------YSIFVGDLGPEVNEYVLMSLF 197
Query: 77 -SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
++Y S KI P+ +G GFV+FA+ ++ ++ALH++ G G + R
Sbjct: 198 QNKYPSCKSAKIMSDPISGMSRGYGFVRFADEQDQQKALHEMQGVYCGNRPMR 250
>gi|340924065|gb|EGS18968.1| hypothetical protein CTHT_0055850 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 393
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 77/147 (52%), Gaps = 21/147 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQ---------------------QYSSQGGYAS 39
+ EM GVYC +RPMRI ATP++ S + Q + + Y
Sbjct: 193 LVEMQGVYCGNRPMRISTATPKQRSHHHQYGHHPPAPMMPPVPGHPAAPPMWGNYPYYGQ 252
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
P Q D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF
Sbjct: 253 QYNPIQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFV 312
Query: 100 NRENAEEALHKLNGTVIGKQSFRADYG 126
+R AE A++++ G IG R +G
Sbjct: 313 HRHAAEMAINQMQGYPIGNSRVRLSWG 339
>gi|119177688|ref|XP_001240593.1| hypothetical protein CIMG_07756 [Coccidioides immitis RS]
Length = 401
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/141 (44%), Positives = 78/141 (55%), Gaps = 15/141 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKS--SGYQQQYSSQGGYASN------GAPGQG----PQ 48
+TEM GVYC +RPMRI ATP+ SG Q G + G P G PQ
Sbjct: 219 LTEMQGVYCGNRPMRISTATPKNKGPSGAPGQMGMPGAPPAGMYPPAMGGPPMGYYGAPQ 278
Query: 49 SEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAE 105
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE
Sbjct: 279 PMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAE 338
Query: 106 EALHKLNGTVIGKQSFRADYG 126
A++++ G IG R +G
Sbjct: 339 MAINQMQGYPIGNSRVRLSWG 359
>gi|225680559|gb|EEH18843.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 400
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 76/141 (53%), Gaps = 15/141 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG--------YASNGAPGQG----PQ 48
+TEM GVYC +RPMRI ATP+ + G Y G P G PQ
Sbjct: 218 LTEMQGVYCGNRPMRISTATPKNKGPGAGPGGAMGMPGAGPAGMYPPMGGPPMGYYGAPQ 277
Query: 49 SEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAE 105
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE
Sbjct: 278 PMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAE 337
Query: 106 EALHKLNGTVIGKQSFRADYG 126
A++++ G IG R +G
Sbjct: 338 MAINQMQGYPIGNSRVRLSWG 358
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 14/113 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P S ++ ++S GG A +GP+ +IFVG L P V + L F
Sbjct: 127 GTPIPNTSRTFKLNWASGGGLADRSREERGPE-------FSIFVGDLGPEVNEYVLVSLF 179
Query: 77 -SQYGEIASVKI---PV---GKGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
S++ S KI P+ +G GFV+F++ + + AL ++ G G + R
Sbjct: 180 QSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMR 232
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 18/101 (17%)
Query: 42 APGQGPQS---------EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG 92
AP QGP S +G + TT+++G L+P + + +R + Q GE +VK+ K
Sbjct: 42 APFQGPASGEAASGSAQQGGDAKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKF 101
Query: 93 CG------FVQFANRENAEEALHKLNGTVI--GKQSFRADY 125
G FV F++ A +AL L+GT I ++F+ ++
Sbjct: 102 SGSNAGYCFVDFSSPAAAAKAL-TLSGTPIPNTSRTFKLNW 141
>gi|303315831|ref|XP_003067920.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240107596|gb|EER25775.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320032017|gb|EFW13973.1| mRNA binding post-transcriptional regulator [Coccidioides posadasii
str. Silveira]
gi|392867443|gb|EAS29326.2| mRNA binding post-transcriptional regulator [Coccidioides immitis
RS]
Length = 400
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/141 (44%), Positives = 78/141 (55%), Gaps = 15/141 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKS--SGYQQQYSSQGGYASN------GAPGQG----PQ 48
+TEM GVYC +RPMRI ATP+ SG Q G + G P G PQ
Sbjct: 219 LTEMQGVYCGNRPMRISTATPKNKGPSGAPGQMGMPGAPPAGMYPPAMGGPPMGYYGAPQ 278
Query: 49 SEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAE 105
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE
Sbjct: 279 PMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAE 338
Query: 106 EALHKLNGTVIGKQSFRADYG 126
A++++ G IG R +G
Sbjct: 339 MAINQMQGYPIGNSRVRLSWG 359
>gi|226292803|gb|EEH48223.1| mRNA binding post-transcriptional regulator (Csx1)
[Paracoccidioides brasiliensis Pb18]
Length = 400
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 76/141 (53%), Gaps = 15/141 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG--------YASNGAPGQG----PQ 48
+TEM GVYC +RPMRI ATP+ + G Y G P G PQ
Sbjct: 218 LTEMQGVYCGNRPMRISTATPKNKGPGAGPGGAMGMPGAGPAGMYPPMGGPPMGYYGAPQ 277
Query: 49 SEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAE 105
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE
Sbjct: 278 PMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAE 337
Query: 106 EALHKLNGTVIGKQSFRADYG 126
A++++ G IG R +G
Sbjct: 338 MAINQMQGYPIGNSRVRLSWG 358
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 14/113 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P S ++ ++S GG A +GP+ +IFVG L P V + L F
Sbjct: 127 GTPIPNTSRTFKLNWASGGGLADRSREERGPE-------FSIFVGDLGPEVNEYVLVSLF 179
Query: 77 -SQYGEIASVKI---PV---GKGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
S++ S KI P+ +G GFV+F++ + + AL ++ G G + R
Sbjct: 180 QSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMR 232
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 18/101 (17%)
Query: 42 APGQGPQS---------EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG 92
AP QGP S +G + TT+++G L+P + + +R + Q GE +VK+ K
Sbjct: 42 APFQGPASGEAASGSAQQGGDAKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKF 101
Query: 93 CG------FVQFANRENAEEALHKLNGTVI--GKQSFRADY 125
G FV F++ A +AL L+GT I ++F+ ++
Sbjct: 102 SGSNAGYCFVDFSSPAAAAKAL-TLSGTPIPNTSRTFKLNW 141
>gi|295661580|ref|XP_002791345.1| mRNA binding post-transcriptional regulator (Csx1)
[Paracoccidioides sp. 'lutzii' Pb01]
gi|226280907|gb|EEH36473.1| mRNA binding post-transcriptional regulator (Csx1)
[Paracoccidioides sp. 'lutzii' Pb01]
Length = 400
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 76/141 (53%), Gaps = 15/141 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG--------YASNGAPGQG----PQ 48
+TEM GVYC +RPMRI ATP+ + G Y G P G PQ
Sbjct: 218 LTEMQGVYCGNRPMRISTATPKNKGPGAGPGGAMGMPGAGPAGMYPPMGGPPMGYYGAPQ 277
Query: 49 SEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAE 105
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE
Sbjct: 278 PMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAE 337
Query: 106 EALHKLNGTVIGKQSFRADYG 126
A++++ G IG R +G
Sbjct: 338 MAINQMQGYPIGNSRVRLSWG 358
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 14/113 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P S ++ ++S GG A +GP+ +IFVG L P V + L F
Sbjct: 127 GTPIPNTSRTFKLNWASGGGLADRSREERGPE-------FSIFVGDLGPEVNEYVLVSLF 179
Query: 77 -SQYGEIASVKI---PV---GKGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
S++ S KI P+ +G GFV+F++ + + AL ++ G G + R
Sbjct: 180 QSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMR 232
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 18/101 (17%)
Query: 42 APGQGPQS---------EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG 92
AP QGP S +G + TT+++G L+P + + +R + Q GE +VK+ K
Sbjct: 42 APFQGPASGEAASGSAQQGGDAKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKF 101
Query: 93 CG------FVQFANRENAEEALHKLNGTVI--GKQSFRADY 125
G FV F++ A +AL L+GT I ++F+ ++
Sbjct: 102 SGSNAGYCFVDFSSPAAAAKAL-TLSGTPIPNTSRTFKLNW 141
>gi|169616740|ref|XP_001801785.1| hypothetical protein SNOG_11545 [Phaeosphaeria nodorum SN15]
gi|111060133|gb|EAT81253.1| hypothetical protein SNOG_11545 [Phaeosphaeria nodorum SN15]
Length = 408
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 78/144 (54%), Gaps = 18/144 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYA-----------SNGAPGQG--- 46
+T+M GVYC +RPMRI ATP+ SG G S GAP G
Sbjct: 213 LTDMQGVYCGNRPMRISTATPKNKSGGPGGPGGMGMQQGGPGGPGMGMYSMGAPPMGYYG 272
Query: 47 -PQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRE 102
PQ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R
Sbjct: 273 APQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRH 332
Query: 103 NAEEALHKLNGTVIGKQSFRADYG 126
AE A++++ G IG R +G
Sbjct: 333 AAEMAINQMQGYPIGNSRVRLSWG 356
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 14/113 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ ++S GG A +GP+ +IFVG L P VT+ L Q F
Sbjct: 122 GQLIPNSNRPFKLNWASGGGLADRSRDERGPE-------YSIFVGDLGPEVTEFVLVQLF 174
Query: 77 -SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
++Y S KI P+ +G GFV+FA+ + ++AL + G G + R
Sbjct: 175 QNKYRSTKSAKIMSDPISGMSRGYGFVRFADEADQQKALTDMQGVYCGNRPMR 227
Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 15/106 (14%)
Query: 25 SGYQQQYSSQGGYASNGAPGQG----PQSEG-----DSSNTTIFVGGLDPNVTDEDLRQP 75
SG Q Q + NG P QG P S G + TT+++G L+P + + +R
Sbjct: 21 SGSQPDLGQQMDPSGNGFPPQGNMGPPGSAGGDGQPSAGKTTLWMGELEPWIDENFVRSI 80
Query: 76 FSQYGEIASVKIPVGKGCG-----FVQFANRENAEEALHKLNGTVI 116
+ GE +VK+ K G FV F+ E A +AL LNG +I
Sbjct: 81 WYNMGETVNVKMIRDKFSGNAGYCFVDFSTPEAAAKAL-SLNGQLI 125
>gi|240280986|gb|EER44489.1| mRNA binding post-transcriptional regulator [Ajellomyces capsulatus
H143]
gi|325092520|gb|EGC45830.1| mRNA binding post-transcriptional regulator [Ajellomyces capsulatus
H88]
Length = 399
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 75/140 (53%), Gaps = 14/140 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG-------YASNGAPGQG----PQS 49
+TEM GVYC +RPMRI ATP+ + + G P G PQ
Sbjct: 218 LTEMQGVYCGNRPMRISTATPKNKGAGAGPGAMGMPGAGPAGMFPPMGGPPMGYYGAPQP 277
Query: 50 EG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEE 106
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE
Sbjct: 278 MNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEM 337
Query: 107 ALHKLNGTVIGKQSFRADYG 126
A++++ G IG R +G
Sbjct: 338 AINQMQGYPIGNSRVRLSWG 357
Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 14/113 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P S ++ ++S GG A +GP+ +IFVG L P V + L F
Sbjct: 127 GTPIPNTSRTFKLNWASGGGLADRSREERGPE-------FSIFVGDLGPEVNEYVLVSLF 179
Query: 77 -SQYGEIASVKI---PV---GKGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
S++ S KI P+ +G GFV+F++ + + AL ++ G G + R
Sbjct: 180 QSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMR 232
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 39 SNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG---- 94
++G P G + + TT+++G L+P + + +R + Q GE +VK+ K G
Sbjct: 48 ASGEPASGSAQQAGEAKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAG 107
Query: 95 --FVQFANRENAEEALHKLNGTVI--GKQSFRADY 125
FV F A +AL L+GT I ++F+ ++
Sbjct: 108 YCFVDFTTPAAAAKAL-TLSGTPIPNTSRTFKLNW 141
>gi|225562584|gb|EEH10863.1| RNA-binding protein [Ajellomyces capsulatus G186AR]
Length = 427
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 75/140 (53%), Gaps = 14/140 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG-------YASNGAPGQG----PQS 49
+TEM GVYC +RPMRI ATP+ + + G P G PQ
Sbjct: 232 LTEMQGVYCGNRPMRISTATPKNKGAGAGPGAMGMPGAGPAGMFPPMGGPPMGYYGAPQP 291
Query: 50 EG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEE 106
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE
Sbjct: 292 MNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEM 351
Query: 107 ALHKLNGTVIGKQSFRADYG 126
A++++ G IG R +G
Sbjct: 352 AINQMQGYPIGNSRVRLSWG 371
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 14/113 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P S ++ ++S GG A +GP+ +IFVG L P V + L F
Sbjct: 141 GTPIPNTSRTFKLNWASGGGLADRSREERGPE-------FSIFVGDLGPEVNEYVLVSLF 193
Query: 77 -SQYGEIASVKI---PV---GKGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
S++ S KI P+ +G GFV+F++ + + AL ++ G G + R
Sbjct: 194 QSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMR 246
>gi|154279514|ref|XP_001540570.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150412513|gb|EDN07900.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 422
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 75/140 (53%), Gaps = 14/140 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG-------YASNGAPGQG----PQS 49
+TEM GVYC +RPMRI ATP+ + + G P G PQ
Sbjct: 242 LTEMQGVYCGNRPMRISTATPKNKGAGAGPGAMGMPGAGPAGMFPPMGGPPMGYYGAPQP 301
Query: 50 EG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEE 106
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE
Sbjct: 302 MNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEM 361
Query: 107 ALHKLNGTVIGKQSFRADYG 126
A++++ G IG R +G
Sbjct: 362 AINQMQGYPIGNSRVRLSWG 381
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 14/113 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P S ++ ++S GG A +GP+ +IFVG L P V + L F
Sbjct: 151 GTPIPNTSRTFKLNWASGGGLADRSREERGPE-------FSIFVGDLGPEVNEYVLVSLF 203
Query: 77 -SQYGEIASVKI---PV---GKGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
S++ S KI P+ +G GFV+F++ + + AL ++ G G + R
Sbjct: 204 QSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMR 256
>gi|320587473|gb|EFW99953.1| mRNA-binding post-transcriptional regulator [Grosmannia clavigera
kw1407]
Length = 399
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 79/152 (51%), Gaps = 26/152 (17%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSS-----GYQQQYSSQGGYASNGA------------- 42
+ EM GVYC +RPMRI ATP+ S G Q+ G A
Sbjct: 194 LVEMQGVYCGNRPMRISTATPKTRSHQYGQGQHGQHMPAHGPAQGNMGWGGMGNGGNGGY 253
Query: 43 --PGQGPQSE------GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG 94
PG GP + D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCG
Sbjct: 254 YQPGFGPMAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCG 313
Query: 95 FVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
FVQF +R AE A++++ G IG R +G
Sbjct: 314 FVQFVHRHAAEMAINQMQGYPIGNSRVRLSWG 345
>gi|389643224|ref|XP_003719244.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae 70-15]
gi|351639013|gb|EHA46877.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae 70-15]
gi|440462667|gb|ELQ32668.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae Y34]
gi|440489843|gb|ELQ69456.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae P131]
Length = 415
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 83/158 (52%), Gaps = 34/158 (21%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYAS---NGAPG------------- 44
+ EM GVYC +RPMRI ATP+ S QQY +QG + + N P
Sbjct: 199 LVEMQGVYCGNRPMRISTATPKTRS--HQQYGNQGPHGAGPMNMTPPAQNMQWGMNPYGY 256
Query: 45 QGPQSE----------------GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP 88
Q PQ+ D +NTT+FVGGL VT+++LR F +G+I VKIP
Sbjct: 257 QQPQAPPPNTAFNNPMQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGDITYVKIP 316
Query: 89 VGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
GKGCGFVQF +R AE A++++ G IG R +G
Sbjct: 317 PGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWG 354
>gi|378727642|gb|EHY54101.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 398
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 79/150 (52%), Gaps = 31/150 (20%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG---------------- 44
+TEM GVYC +RPMRI ATP K+ G Q A+ G PG
Sbjct: 216 LTEMQGVYCGNRPMRISTATP-KNKGLPMQG------ANMGMPGPAGPMGYPPMGGPPMP 268
Query: 45 -----QGPQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFV 96
Q PQ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFV
Sbjct: 269 YYGQQQTPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFV 328
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADYG 126
QF R AE A++++ G IG R +G
Sbjct: 329 QFVQRHAAEMAINQMQGYPIGNSRVRLSWG 358
>gi|408392147|gb|EKJ71507.1| hypothetical protein FPSE_08320 [Fusarium pseudograminearum CS3096]
Length = 442
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 78/149 (52%), Gaps = 23/149 (15%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSS-----------------GYQQQYSSQGGYASNGAP 43
+ EM GVYC +RPMRI ATP+ G QQ G G P
Sbjct: 201 LVEMQGVYCGNRPMRISTATPKNRGNHGFGGQGHQHGGPMMPGMPQQQQMWNGGGMQGFP 260
Query: 44 --GQGPQSE----GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQ 97
G P ++ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQ
Sbjct: 261 YGGFNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQ 320
Query: 98 FANRENAEEALHKLNGTVIGKQSFRADYG 126
F +R AE A++++ G IG R +G
Sbjct: 321 FVHRHAAEMAINQMQGYPIGNSRVRLSWG 349
>gi|46122719|ref|XP_385913.1| hypothetical protein FG05737.1 [Gibberella zeae PH-1]
Length = 409
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 79/148 (53%), Gaps = 22/148 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGY------------------QQQYSSQGGYASNGA 42
+ EM GVYC +RPMRI ATP+ + QQQ + GG
Sbjct: 201 LVEMQGVYCGNRPMRISTATPKNRGNHGFGGQGHQHGGPMMPGMPQQQMWNGGGMQGFPY 260
Query: 43 PGQGPQSE----GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
G P ++ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF
Sbjct: 261 GGFNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQF 320
Query: 99 ANRENAEEALHKLNGTVIGKQSFRADYG 126
+R AE A++++ G IG R +G
Sbjct: 321 VHRHAAEMAINQMQGYPIGNSRVRLSWG 348
>gi|429854847|gb|ELA29832.1| mRNA binding post-transcriptional regulator, partial
[Colletotrichum gloeosporioides Nara gc5]
Length = 366
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 81/151 (53%), Gaps = 25/151 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQ-----------------------GG 36
+ EM GVYC +RPMRI ATP+ ++ G Q + +Q G
Sbjct: 209 LVEMQGVYCGNRPMRISTATPKNRNHGPYQHHGNQMMAPGLPPHQQGFYGVPSPAQYGGA 268
Query: 37 Y-ASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGF 95
Y A PGQ D +NTT+FVGGL VT+++LR F +GEI V+IP GKGCGF
Sbjct: 269 YGAPYNPPGQQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVQIPPGKGCGF 328
Query: 96 VQFANRENAEEALHKLNGTVIGKQSFRADYG 126
VQF +R AE A++++ G IG R +G
Sbjct: 329 VQFVHRHAAEMAINQMQGYPIGNSRVRLSWG 359
Score = 35.8 bits (81), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 52/90 (57%), Gaps = 10/90 (11%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVGKGCG-----FVQ 97
GQ P +GD++ T+++G L+P + + ++ F + GE +VK+ K G FV+
Sbjct: 46 GQAP-IQGDANKNTLWMGELEPWMDENFIKGVFLTATGEPVNVKVIRDKTSGNAGYCFVE 104
Query: 98 FANRENAEEALHKLNGTVI--GKQSFRADY 125
F + + A +AL +LNGT + ++F+ ++
Sbjct: 105 FTSSDAASKAL-QLNGTPVPNSNRAFKLNW 133
>gi|212546039|ref|XP_002153173.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces marneffei ATCC 18224]
gi|210064693|gb|EEA18788.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces marneffei ATCC 18224]
Length = 392
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 75/140 (53%), Gaps = 14/140 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY-------ASNGAPGQG----PQS 49
++EM GVYC +RPMRI ATP+ A+ G P G PQ
Sbjct: 212 LSEMQGVYCGNRPMRISTATPKNKGPGVGPGGMGMPGPAGIYPPAAMGGPPMGFYGAPQP 271
Query: 50 EG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEE 106
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE
Sbjct: 272 MNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEM 331
Query: 107 ALHKLNGTVIGKQSFRADYG 126
A++++ G IG R +G
Sbjct: 332 AINQMQGYPIGNSRVRLSWG 351
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 14/113 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ +++ GG A G +GP+ +IFVG L P V + L F
Sbjct: 121 GTPMPNTTRAFKLNWATGGGLADRGRDERGPE-------YSIFVGDLGPEVNEYVLVSLF 173
Query: 77 -SQYGEIASVKI---PV---GKGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
S++ S KI P+ +G GFV+F++ + + AL ++ G G + R
Sbjct: 174 QSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMR 226
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 54/108 (50%), Gaps = 14/108 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQ----GPQSEGDSSNTTIFVGGLDPNVTDEDL 72
GA TP ++ Q S +A G PG+ PQ GD TT+++G L+P + + +
Sbjct: 19 GAPTPADTNMTGQADPSPAPFA--GTPGEPSAAAPQQGGDGK-TTLWMGELEPWIDENFI 75
Query: 73 RQPFSQYGEIASVKIPVGKGCG------FVQFANRENAEEALHKLNGT 114
R + Q GE +VK+ K G FV F++ A +AL LNGT
Sbjct: 76 RNLWFQMGEQVNVKMIRDKFSGSNAGYCFVDFSSAAAAGKAL-SLNGT 122
>gi|258576821|ref|XP_002542592.1| hypothetical protein UREG_02108 [Uncinocarpus reesii 1704]
gi|237902858|gb|EEP77259.1| hypothetical protein UREG_02108 [Uncinocarpus reesii 1704]
Length = 399
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 75/141 (53%), Gaps = 15/141 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYA--------SNGAPGQG----PQ 48
+TEM GVYC +RPMRI ATP+ A + G P G PQ
Sbjct: 215 LTEMQGVYCGNRPMRISTATPKNKGPAGGPGQMGMPGAPPAGMYPPAMGGPPMGYYGTPQ 274
Query: 49 SEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAE 105
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE
Sbjct: 275 PMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAE 334
Query: 106 EALHKLNGTVIGKQSFRADYG 126
A++++ G IG R +G
Sbjct: 335 MAINQMQGYPIGNSRVRLSWG 355
>gi|407925486|gb|EKG18497.1| hypothetical protein MPH_04299 [Macrophomina phaseolina MS6]
Length = 311
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 77/142 (54%), Gaps = 16/142 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASN---------GAPGQG----P 47
+ EM GVYC +RPMRI ATP+ SG GG GAP G P
Sbjct: 127 LNEMQGVYCGNRPMRISTATPKNKSGGGPGAGPMGGMHGGPGPVGMYGMGAPPLGYYGAP 186
Query: 48 QSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 104
Q D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R A
Sbjct: 187 QPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAA 246
Query: 105 EEALHKLNGTVIGKQSFRADYG 126
E A++++ G IG R +G
Sbjct: 247 EMAINQMQGYPIGNSRVRLSWG 268
>gi|242824554|ref|XP_002488282.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces stipitatus ATCC 10500]
gi|218713203|gb|EED12628.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces stipitatus ATCC 10500]
Length = 392
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 75/140 (53%), Gaps = 14/140 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY-------ASNGAPGQG----PQS 49
++EM GVYC +RPMRI ATP+ A+ G P G PQ
Sbjct: 212 LSEMQGVYCGNRPMRISTATPKNKGPGVGPGGMGMPGPAGIYPPAAMGGPPMGFYGAPQP 271
Query: 50 EG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEE 106
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE
Sbjct: 272 MNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEM 331
Query: 107 ALHKLNGTVIGKQSFRADYG 126
A++++ G IG R +G
Sbjct: 332 AINQMQGYPIGNSRVRLSWG 351
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 14/113 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ +++ GG A G +GP+ +IFVG L P V + L F
Sbjct: 121 GTPMPNTTRAFKLNWATGGGLADRGRDERGPE-------YSIFVGDLGPEVNEYVLVSLF 173
Query: 77 -SQYGEIASVKI---PV---GKGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
S++ S KI P+ +G GFV+F++ + + AL ++ G G + R
Sbjct: 174 QSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMR 226
>gi|242824548|ref|XP_002488281.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces stipitatus ATCC 10500]
gi|218713202|gb|EED12627.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces stipitatus ATCC 10500]
Length = 393
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 75/140 (53%), Gaps = 14/140 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY-------ASNGAPGQG----PQS 49
++EM GVYC +RPMRI ATP+ A+ G P G PQ
Sbjct: 212 LSEMQGVYCGNRPMRISTATPKNKGPGVGPGGMGMPGPAGIYPPAAMGGPPMGFYGAPQP 271
Query: 50 EG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEE 106
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE
Sbjct: 272 MNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEM 331
Query: 107 ALHKLNGTVIGKQSFRADYG 126
A++++ G IG R +G
Sbjct: 332 AINQMQGYPIGNSRVRLSWG 351
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 14/113 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ +++ GG A G +GP+ +IFVG L P V + L F
Sbjct: 121 GTPMPNTTRAFKLNWATGGGLADRGRDERGPE-------YSIFVGDLGPEVNEYVLVSLF 173
Query: 77 -SQYGEIASVKI---PV---GKGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
S++ S KI P+ +G GFV+F++ + + AL ++ G G + R
Sbjct: 174 QSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMR 226
>gi|361131740|gb|EHL03392.1| putative Uncharacterized RNA-binding protein C23E6.01c [Glarea
lozoyensis 74030]
Length = 391
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 78/152 (51%), Gaps = 26/152 (17%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYA------------------SNGA 42
+TEM GVYC +RPMRI ATP+ SG + S GA
Sbjct: 200 LTEMQGVYCGNRPMRISTATPKNKSGGAGGPAGMPMQGGGGMGGGQPGGMGAPGMYSMGA 259
Query: 43 PGQ-----GPQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG 94
P Q PQ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCG
Sbjct: 260 PPQLGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCG 319
Query: 95 FVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
FVQF R AE A++++ G IG R +G
Sbjct: 320 FVQFVQRHAAEMAINQMQGYPIGNSRVRLSWG 351
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 7/73 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALH 109
+IFVG L P V + L F +++ S KI P+ +G GFV+FA+ ++ + AL
Sbjct: 142 SIFVGDLGPEVNEYVLVSLFQARFPSCKSAKIMTDPISGMSRGYGFVRFADEQDQQRALT 201
Query: 110 KLNGTVIGKQSFR 122
++ G G + R
Sbjct: 202 EMQGVYCGNRPMR 214
>gi|125549809|gb|EAY95631.1| hypothetical protein OsI_17488 [Oryza sativa Indica Group]
Length = 263
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/134 (47%), Positives = 76/134 (56%), Gaps = 28/134 (20%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
TIFVGGLDPNVT++ L+Q F+ YGE+ VKIPVGK CGFVQ+ NR +AE+AL L GT+I
Sbjct: 123 TIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRCGFVQYVNRPSAEQALAVLQGTLI 182
Query: 117 GKQSFRADYG------------NQW----------SGAYYGGQVYDGYGYAIPPPNDPSM 154
G Q+ R +G NQW SG G + Y GY P DP+M
Sbjct: 183 GGQNVRLSWGRSLSNKQPQHDSNQWGAGAGAGGYYSGYGQGYEAYGGYAQ----PQDPNM 238
Query: 155 YAAAAAAYGAYPVY 168
Y AY YP Y
Sbjct: 239 Y--GYGAYAGYPNY 250
>gi|367053249|ref|XP_003657003.1| hypothetical protein THITE_2132116 [Thielavia terrestris NRRL 8126]
gi|347004268|gb|AEO70667.1| hypothetical protein THITE_2132116 [Thielavia terrestris NRRL 8126]
Length = 396
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 79/150 (52%), Gaps = 27/150 (18%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAP----------------G 44
+ EM GVYC +R MRI ATP+ S Q+ G A+ P G
Sbjct: 193 LVEMQGVYCGNRAMRISTATPKSRS---HQFGHHGHGATQMMPPIAGHPGPMWGVPSYYG 249
Query: 45 QGPQSE--------GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFV 96
Q P ++ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFV
Sbjct: 250 QQPFNQHIAPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFV 309
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADYG 126
QF +R AE A++++ G IG R +G
Sbjct: 310 QFVHRHAAEMAINQMQGYPIGNSRVRLSWG 339
>gi|452844119|gb|EME46053.1| hypothetical protein DOTSEDRAFT_70146 [Dothistroma septosporum
NZE10]
Length = 407
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 76/143 (53%), Gaps = 17/143 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYA----------SNGAPGQG---- 46
+ EM GVYC +RPMRI ATP+ SG + GAP G
Sbjct: 224 LHEMQGVYCGNRPMRISTATPKNKSGGGGPGMPGMQGGMGPGAPGGVYAMGAPPMGYYGA 283
Query: 47 PQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANREN 103
PQ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R
Sbjct: 284 PQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHA 343
Query: 104 AEEALHKLNGTVIGKQSFRADYG 126
AE A++++ G IG R +G
Sbjct: 344 AEMAINQMQGYPIGNSRVRLSWG 366
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 15/121 (12%)
Query: 10 SSRPMRI-GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVT 68
++R +++ G P + ++ ++S GG A +GP+ +IFVG L P V
Sbjct: 125 ATRALQLNGQVIPNSNRQFKLNWASGGGLADRSRDDRGPE-------YSIFVGDLGPEVN 177
Query: 69 DEDLRQPFS-QYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSF 121
+ L F +Y S KI P+ +G GFV+FA+ + ++ALH++ G G +
Sbjct: 178 EYVLMSLFQGKYTSCKSAKIMSDPISGMSRGYGFVRFADEGDQQKALHEMQGVYCGNRPM 237
Query: 122 R 122
R
Sbjct: 238 R 238
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 43 PGQGP--QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG------ 94
P QGP ++G TT+++G L+P + + +R + G +VK+ K G
Sbjct: 56 PAQGPPGSAQGGDQKTTLWMGELEPWIDENFVRSVWFGMGYQVNVKMIRDKFSGSNAGYC 115
Query: 95 FVQFANRENAEEALHKLNGTVI 116
FV F N E+A AL +LNG VI
Sbjct: 116 FVDFENPESATRAL-QLNGQVI 136
>gi|406866319|gb|EKD19359.1| RNA-binding protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 812
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 83/153 (54%), Gaps = 26/153 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGY--------QQQYSSQG-------GYASNGAP-- 43
+TEM GVYC +RPMRI ATP+ +G QQ + G G S GAP
Sbjct: 458 LTEMQGVYCGNRPMRISTATPKNKAGGGGPAGMPMQQGGPNMGPGMPAAPGMYSMGAPPP 517
Query: 44 --------GQGPQSE-GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG 94
Q P ++ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCG
Sbjct: 518 MQYGGGYGQQQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCG 577
Query: 95 FVQFANRENAEEALHKLNGTVIGKQSFRADYGN 127
FVQF R AE A++++ G IG R +G
Sbjct: 578 FVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGR 610
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 15/113 (13%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G+ P + ++ ++S GG A +GP+ +IFVG L P V + L F
Sbjct: 368 GSMIPNTARPFKLNWASGGGLADRRD-DRGPE-------YSIFVGDLGPEVNEYVLVSLF 419
Query: 77 -SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
+++ S KI P+ +G GFV+FA+ + + AL ++ G G + R
Sbjct: 420 QARFPSCKSAKIMTDPISGMSRGYGFVRFADEGDQQRALTEMQGVYCGNRPMR 472
>gi|400600479|gb|EJP68153.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 410
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 76/145 (52%), Gaps = 19/145 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK------------------SSGYQQQYSSQGGYASNG- 41
+ EM GVYC +RPMRI ATP+ Q ++ G+A G
Sbjct: 200 LVEMQGVYCGNRPMRISTATPKNRGNHGFGHGPHGGPMMGGGMPQQPMWNGMQGFAYGGY 259
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANR 101
P D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF +R
Sbjct: 260 NPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHR 319
Query: 102 ENAEEALHKLNGTVIGKQSFRADYG 126
AE A++++ G IG R +G
Sbjct: 320 HAAEMAINQMQGYPIGNSRVRLSWG 344
>gi|255954935|ref|XP_002568220.1| Pc21g11890 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589931|emb|CAP96086.1| Pc21g11890 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 408
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 72/142 (50%), Gaps = 17/142 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASN----------------GAPG 44
+TEM GVYC +RPMRI ATP+ GAP
Sbjct: 214 LTEMQGVYCGNRPMRISTATPKNKGPGVGGNGGAAMGMPGPAGMYPPMGGPPMPFYGAP- 272
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 104
Q D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R A
Sbjct: 273 QPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAA 332
Query: 105 EEALHKLNGTVIGKQSFRADYG 126
E A++++ G IG R +G
Sbjct: 333 EMAINQMQGYPIGNSRVRLSWG 354
>gi|322705595|gb|EFY97180.1| mRNA binding post-transcriptional regulator [Metarhizium anisopliae
ARSEF 23]
Length = 390
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 76/147 (51%), Gaps = 21/147 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSS------------------GYQQQ--YSSQGGYASN 40
+ EM GVYC +RPMRI ATP+ G QQ + G+
Sbjct: 180 LVEMQGVYCGNRPMRISTATPKNRGNHGFGGPGHHAGGAPMMGGVPQQPMWGGMQGFPYG 239
Query: 41 G-APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
G P D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF
Sbjct: 240 GYNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFV 299
Query: 100 NRENAEEALHKLNGTVIGKQSFRADYG 126
+R AE A++++ G IG R +G
Sbjct: 300 HRHAAEMAINQMQGYPIGNSRVRLSWG 326
>gi|425773059|gb|EKV11433.1| MRNA binding post-transcriptional regulator (Csx1), putative
[Penicillium digitatum Pd1]
gi|425778836|gb|EKV16941.1| MRNA binding post-transcriptional regulator (Csx1), putative
[Penicillium digitatum PHI26]
Length = 408
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 72/142 (50%), Gaps = 17/142 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASN----------------GAPG 44
+TEM GVYC +RPMRI ATP+ GAP
Sbjct: 214 LTEMQGVYCGNRPMRISTATPKNKGPGVGGNGGAAMGMPGPAGMYPPMGGPPMPFYGAP- 272
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 104
Q D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R A
Sbjct: 273 QPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAA 332
Query: 105 EEALHKLNGTVIGKQSFRADYG 126
E A++++ G IG R +G
Sbjct: 333 EMAINQMQGYPIGNSRVRLSWG 354
>gi|162312303|ref|NP_596601.2| mRNA processing factor (predicted) [Schizosaccharomyces pombe
972h-]
gi|26401571|sp|O60176.2|YG41_SCHPO RecName: Full=Uncharacterized RNA-binding protein C23E6.01c
gi|157310462|emb|CAB83010.2| mRNA processing factor (predicted) [Schizosaccharomyces pombe]
Length = 473
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 77/132 (58%), Gaps = 9/132 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQG------GYASNGAPGQGPQSEGDSS 54
+ EM G C RP+R+G ATP+ + + G+ S P PQ D++
Sbjct: 245 LAEMQGQICGDRPIRVGLATPKSKAHVFSPVNVVPVSMPPVGFYSAAQPV--PQF-ADTA 301
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N+T+FVGGL V++E+L+ F +GEI VKIP GKGCGFVQF NR++AE A+++L G
Sbjct: 302 NSTVFVGGLSKFVSEEELKYLFQNFGEIVYVKIPPGKGCGFVQFVNRQSAEIAINQLQGY 361
Query: 115 VIGKQSFRADYG 126
+G R +G
Sbjct: 362 PLGNSRIRLSWG 373
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 9/105 (8%)
Query: 36 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------ 88
+AS G G +S +S +IFVG L PNV + D+ F S+Y S KI
Sbjct: 168 NWASGG--GLREKSISKASEYSIFVGDLSPNVNEFDVYSLFASRYNSCKSAKIMTDPQTN 225
Query: 89 VGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQWSGAY 133
V +G GFV+F + + + AL ++ G + G + R S A+
Sbjct: 226 VSRGYGFVRFTDENDQKSALAEMQGQICGDRPIRVGLATPKSKAH 270
>gi|322694638|gb|EFY86462.1| mRNA binding post-transcriptional regulator [Metarhizium acridum
CQMa 102]
Length = 384
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 76/147 (51%), Gaps = 21/147 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSS------------------GYQQQ--YSSQGGYASN 40
+ EM GVYC +RPMRI ATP+ G QQ + G+
Sbjct: 180 LVEMQGVYCGNRPMRISTATPKNRGNHGFGGPGHHAGGAPMMGGVPQQPMWGGMQGFPYG 239
Query: 41 G-APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
G P D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF
Sbjct: 240 GYNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFV 299
Query: 100 NRENAEEALHKLNGTVIGKQSFRADYG 126
+R AE A++++ G IG R +G
Sbjct: 300 HRHAAEMAINQMQGYPIGNSRVRLSWG 326
>gi|302420775|ref|XP_003008218.1| RNA-binding post-transcriptional regulator csx1 [Verticillium
albo-atrum VaMs.102]
gi|261353869|gb|EEY16297.1| RNA-binding post-transcriptional regulator csx1 [Verticillium
albo-atrum VaMs.102]
Length = 430
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 80/155 (51%), Gaps = 32/155 (20%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY------------ASNGAPGQGPQ 48
+ EM GVYC +RPMRI ATP+ + Y +Q G+ A G P GPQ
Sbjct: 203 LVEMQGVYCGNRPMRISTATPKNRN--HGPYGAQQGHQMPPAMHPHQPQAFYGVP-PGPQ 259
Query: 49 -----------------SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK 91
D +NTT+FVGGL VT+++LR F +GEI VKIP GK
Sbjct: 260 FNQGYGAAPQFQQQQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGK 319
Query: 92 GCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
GCGFVQF +R AE A++++ G IG R +G
Sbjct: 320 GCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWG 354
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 26 GYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIAS 84
GY ++ GY N GP + D + TT+++G L+P + + ++ F + GE +
Sbjct: 21 GYGTPVAAGMGYPPNANELTGPGNSPDGNKTTLWMGELEPWMDENFIKGVFATATGEQVN 80
Query: 85 VKIPVGKGCG-----FVQFANRENAEEALHKLNGTVI 116
VK+ K G FV+F + + A +AL LNGT +
Sbjct: 81 VKVIRDKSSGNAGYCFVEFNSTDAASKAL-ALNGTPV 116
>gi|346977902|gb|EGY21354.1| RNA-binding post-transcriptional regulator csx1 [Verticillium
dahliae VdLs.17]
Length = 418
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 80/155 (51%), Gaps = 32/155 (20%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY------------ASNGAPGQGPQ 48
+ EM GVYC +RPMRI ATP+ + Y +Q G+ A G P GPQ
Sbjct: 203 LVEMQGVYCGNRPMRISTATPKNRN--HGPYGAQQGHQMPPAMHPHQPQAFYGVP-PGPQ 259
Query: 49 -----------------SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK 91
D +NTT+FVGGL VT+++LR F +GEI VKIP GK
Sbjct: 260 FNQGYGAAPQFQQQQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGK 319
Query: 92 GCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
GCGFVQF +R AE A++++ G IG R +G
Sbjct: 320 GCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWG 354
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 26 GYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIAS 84
GY ++ GY N GP + D + TT+++G L+P + + ++ F + GE +
Sbjct: 21 GYGTPVAAGMGYPPNANELTGPGNSPDGNKTTLWMGELEPWMDENFIKGVFATATGEQVN 80
Query: 85 VKIPVGKGCG-----FVQFANRENAEEALHKLNGTVI 116
VK+ K G FV+F + + A +AL LNGT +
Sbjct: 81 VKVIRDKSSGNAGYCFVEFNSTDAASKAL-ALNGTPV 116
>gi|326524666|dbj|BAK04269.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 408
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 74/151 (49%), Gaps = 25/151 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSS--------------GYQQQYSSQGGY--------- 37
+ EM GVYC +RPMRI ATP+ G QQ GG
Sbjct: 200 LVEMQGVYCGNRPMRISTATPKNRGNHGFAHGHHNAMMGGMPQQQMWAGGMQQGFPYGGG 259
Query: 38 --ASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGF 95
P D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGF
Sbjct: 260 GGGGGFNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGF 319
Query: 96 VQFANRENAEEALHKLNGTVIGKQSFRADYG 126
VQF +R AE A++++ G IG R +G
Sbjct: 320 VQFVHRHAAEMAINQMQGYPIGNSRVRLSWG 350
>gi|303290118|ref|XP_003064346.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226453944|gb|EEH51251.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 420
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 71/127 (55%), Gaps = 3/127 (2%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK--SSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTI 58
+ EMNG+ C SR MRI A PRK + GYQ G G G G + N T+
Sbjct: 172 LVEMNGLACGSRNMRISLAIPRKNMTVGYQGGGGGGGDGGGGGGGGGGGARDDGDDNCTV 231
Query: 59 FVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGK 118
FVGGL +++D +LR F YGE+ +KIP GKGCGFVQFA R AE A+ LN +IG
Sbjct: 232 FVGGLG-SISDAELRIHFEPYGELVYIKIPHGKGCGFVQFAQRSCAEAAIAGLNNALIGT 290
Query: 119 QSFRADY 125
R +
Sbjct: 291 SRVRLSW 297
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 9/113 (7%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P Y+ ++S G A G G + +S++ +IFVG L P V D L++ F
Sbjct: 76 GTQMPNAQQNYRLNWASFGVGARFAGGGDGGAT--NSNDHSIFVGDLPPEVNDFMLQEVF 133
Query: 77 S-QYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
S +Y + + ++ KG GFV+FA+ + AL ++NG G ++ R
Sbjct: 134 SSRYASVRNARVVTDPATGRSKGFGFVRFADESQRDRALVEMNGLACGSRNMR 186
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALH 109
+T+++G L + + L Q F+ G +ASVKI K G GFV+ +R AE AL
Sbjct: 13 STLWIGDLGYWMDEAYLHQCFASVGGVASVKIIRNKQTGYSEGYGFVEMCDRATAEHALR 72
Query: 110 KLNGTVI--GKQSFRADYGNQWSGAYYGG 136
LNGT + +Q++R ++ + GA + G
Sbjct: 73 ALNGTQMPNAQQNYRLNWASFGVGARFAG 101
>gi|346325712|gb|EGX95309.1| mRNA binding post-transcriptional regulator [Cordyceps militaris
CM01]
Length = 474
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 76/150 (50%), Gaps = 24/150 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK-----------------------SSGYQQQYSSQGGY 37
+ EM GVYC +RPMRI ATP+ Q ++ G+
Sbjct: 259 LVEMQGVYCGNRPMRISTATPKNRGNHGFGHGHHGGGGPMMGGGMPQQQQQPMWNGMQGF 318
Query: 38 ASNG-APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFV 96
A G P D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFV
Sbjct: 319 AYGGYNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFV 378
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADYG 126
QF +R AE A++++ G IG R +G
Sbjct: 379 QFVHRHAAEMAINQMQGYPIGNSRVRLSWG 408
Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 39 SNGAPGQG------PQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVGK 91
+NG P G P D S TT+++G L+P + + ++ F S GE +VK+ K
Sbjct: 84 ANGTPPSGDMSAPPPTGSSDQSKTTLWMGELEPWMDENFIKGVFLSAAGETVNVKVIRDK 143
Query: 92 GCG-----FVQFANRENAEEALHKLNGTVI 116
G FV+F N + A +AL LNG +
Sbjct: 144 NSGNAGYCFVEFQNADAASKAL-GLNGNPV 172
>gi|320580282|gb|EFW94505.1| RNA binding protein [Ogataea parapolymorpha DL-1]
Length = 398
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 72/136 (52%), Gaps = 10/136 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG----------QGPQSE 50
+ EMNG + R +R+ ATP+ + +++ APG Q P +
Sbjct: 185 LVEMNGKWLDGRLIRVALATPKHQNQQFRKHQIPMELDPYHAPGLPPIGYYAAPQPPPAY 244
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK 110
D +NTT+FVGGL N+T+ L F YG+I VK+P GKGCGFV+F R +AE A+ +
Sbjct: 245 SDPTNTTVFVGGLSNNITEATLLSIFEPYGQIVHVKVPPGKGCGFVKFTQRTDAERAIEQ 304
Query: 111 LNGTVIGKQSFRADYG 126
L G VI R +G
Sbjct: 305 LQGYVIDGSRVRLSWG 320
>gi|159480296|ref|XP_001698220.1| hypothetical protein CHLREDRAFT_193148 [Chlamydomonas reinhardtii]
gi|158273718|gb|EDO99505.1| predicted protein [Chlamydomonas reinhardtii]
Length = 1212
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/121 (46%), Positives = 74/121 (61%), Gaps = 15/121 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASN----GAPGQGPQSEGDSSNT 56
+ EMNGV+ SSR + A+ S+ ASN P Q P E D NT
Sbjct: 71 LNEMNGVFISSRQHTLSASA----------VSALAPCASNTHCRNTPTQLP-GELDPQNT 119
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
T+FVGGL +V+++ LR F +YGEI+ VKIP GKGCGFV FA+R+ AE A+ ++NGT+I
Sbjct: 120 TLFVGGLSAHVSEDALRGVFGRYGEISYVKIPPGKGCGFVHFADRQAAEYAMQEVNGTII 179
Query: 117 G 117
G
Sbjct: 180 G 180
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQY-GEIASVKIPV------GKGCGFVQFANREN 103
GD + ++FVG L P V D L F QY + S K+ + KG GFV+FA
Sbjct: 7 GDPNCFSLFVGDLPPEVHDHFLESFFRQYFPSVRSAKVMMDNITGRSKGFGFVRFAVEGE 66
Query: 104 AEEALHKLNGTVIGKQ 119
+ AL+++NG I +
Sbjct: 67 RDRALNEMNGVFISSR 82
>gi|426192598|gb|EKV42534.1| hypothetical protein AGABI2DRAFT_229063, partial [Agaricus bisporus
var. bisporus H97]
Length = 396
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 78/160 (48%), Gaps = 34/160 (21%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR---------------------------KSSGYQQQYSS 33
+ EM+G+YC SRPMRI AT + ++ GY S
Sbjct: 171 LIEMHGLYCLSRPMRISPATAKFKPASGVGNGLGVSGLLSEAQLRQVFGQTDGYLMTEES 230
Query: 34 QGGYASNGAPG---QGPQSE----GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVK 86
+A A GP E D NTT+FVGGL P +++E LR F+ +G+I VK
Sbjct: 231 LKHHAHARAILGNLMGPNGEQLTSNDPYNTTVFVGGLSPLISEETLRTFFAPFGDIHYVK 290
Query: 87 IPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+PVGK CGFVQF + +AE A+ K+ G IG R +G
Sbjct: 291 VPVGKHCGFVQFVRKADAERAIEKMQGFPIGGSRIRLSWG 330
>gi|347840237|emb|CCD54809.1| hypothetical protein [Botryotinia fuckeliana]
Length = 218
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 73/152 (48%), Gaps = 27/152 (17%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSG--------------------------YQQQYSSQ 34
+TEM GVYC +RPMRI ATP+ SG
Sbjct: 27 LTEMQGVYCGNRPMRISTATPKNKSGGAGPAGMQMQGGGGGGMPGAMGGAPGMYGMGGGP 86
Query: 35 GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG 94
G P Q D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCG
Sbjct: 87 PMAGYYGTP-QPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCG 145
Query: 95 FVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
FVQF R AE A++++ G IG R +G
Sbjct: 146 FVQFVQRHAAEMAINQMQGYPIGNSRVRLSWG 177
>gi|154296254|ref|XP_001548559.1| hypothetical protein BC1G_12954 [Botryotinia fuckeliana B05.10]
Length = 409
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 73/152 (48%), Gaps = 27/152 (17%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSG--------------------------YQQQYSSQ 34
+TEM GVYC +RPMRI ATP+ SG
Sbjct: 223 LTEMQGVYCGNRPMRISTATPKNKSGGAGPAGMQMQGGGGGGMPGAMGGAPGMYGMGGGP 282
Query: 35 GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG 94
G P Q D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCG
Sbjct: 283 PMAGYYGTP-QPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCG 341
Query: 95 FVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
FVQF R AE A++++ G IG R +G
Sbjct: 342 FVQFVQRHAAEMAINQMQGYPIGNSRVRLSWG 373
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 15/113 (13%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G+ P + ++ ++S GG A +GP+ +IFVG L P V + L F
Sbjct: 133 GSMIPNTTRPFKLNWASGGGLADR-RDDRGPE-------FSIFVGDLGPEVNEYVLVSLF 184
Query: 77 -SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
+++ S KI P+ +G GFV+FA + + AL ++ G G + R
Sbjct: 185 QARFPSCKSAKIMTDPISGMSRGYGFVRFAEEGDQQRALTEMQGVYCGNRPMR 237
>gi|19115155|ref|NP_594243.1| RNA-binding protein Csx1 [Schizosaccharomyces pombe 972h-]
gi|3121946|sp|O13759.1|CSX1_SCHPO RecName: Full=RNA-binding post-transcriptional regulator csx1
gi|2656019|emb|CAB16569.1| RNA-binding protein Csx1 [Schizosaccharomyces pombe]
Length = 632
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 75/138 (54%), Gaps = 21/138 (15%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEG--------- 51
+ M G C RP+RI A+P+ S+ A++ A G P S
Sbjct: 241 LMHMQGYLCQGRPLRISVASPK----------SRASIAADSALGIVPTSTSNRQPNQDLC 290
Query: 52 --DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 109
D NTT+FVGGL N++++DL+ F +G I ++KIP GKGCGFVQ++ + AE+A++
Sbjct: 291 SMDPLNTTVFVGGLASNLSEKDLQVCFQPFGRILNIKIPFGKGCGFVQYSEKSAAEKAIN 350
Query: 110 KLNGTVIGKQSFRADYGN 127
+ G ++G R +G+
Sbjct: 351 TMQGALVGTSHIRLAWGH 368
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 12/89 (13%)
Query: 40 NGAPGQGPQSE----GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG- 94
N +P P + G + T+++G L+P + ++Q ++ E +VK+ K
Sbjct: 65 NCSPSSTPLQDVAGVGSKMSDTLWMGDLEPWMDATFIQQLWASLNEPVNVKVMRSKASSS 124
Query: 95 -------FVQFANRENAEEALHKLNGTVI 116
FVQF++ AE AL K N T+I
Sbjct: 125 ETLISYCFVQFSSSAAAERALMKYNNTMI 153
>gi|358401132|gb|EHK50447.1| hypothetical protein TRIATDRAFT_297212 [Trichoderma atroviride IMI
206040]
Length = 409
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 73/157 (46%), Gaps = 31/157 (19%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSG-------------------------------YQQ 29
+ EM GVYC +RPMRI ATP+ Y
Sbjct: 181 LVEMQGVYCGNRPMRISTATPKNRGNHGFGHGHQGGPMMGGGMPQQQQMWGGVQNFPYGG 240
Query: 30 QYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
GG N P D +NTT+FVGGL VT+++LR F +GEI VKIP
Sbjct: 241 GGGGGGGGGGNFNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPP 300
Query: 90 GKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
GKGCGFVQF +R AE A++++ G IG R +G
Sbjct: 301 GKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWG 337
>gi|210075649|ref|XP_502423.2| YALI0D04917p [Yarrowia lipolytica]
gi|199425763|emb|CAG80611.2| YALI0D04917p [Yarrowia lipolytica CLIB122]
Length = 430
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 81/157 (51%), Gaps = 30/157 (19%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQ----------------QQYSSQGGYAS--NGA 42
+ EM G SRP+R+ ATP+ +Q QQ SQ + NGA
Sbjct: 149 LQEMQGYMLGSRPLRVSTATPKNRHHHQPYMQFQPQQFQPPAHYQQLHSQHPFPHHPNGA 208
Query: 43 PGQ--------GPQSE----GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG 90
P GP D++NTT+FVGGL +V++++LRQ F +G+I VKIP G
Sbjct: 209 PSHQVHQPFYGGPAHPLNQFTDANNTTVFVGGLSSSVSEDELRQYFQGFGDITYVKIPPG 268
Query: 91 KGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYGN 127
KGCGFVQ+ R++AE A+ ++ G IG R +G
Sbjct: 269 KGCGFVQYVQRQSAEMAITQMQGYPIGNGRVRLSWGR 305
>gi|254566455|ref|XP_002490338.1| RNA binding protein that negatively regulates growth rate
[Komagataella pastoris GS115]
gi|238030134|emb|CAY68057.1| RNA binding protein that negatively regulates growth rate
[Komagataella pastoris GS115]
gi|328350732|emb|CCA37132.1| Uncharacterized RNA-binding protein C23E6.01c [Komagataella
pastoris CBS 7435]
Length = 506
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 94/176 (53%), Gaps = 31/176 (17%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQ-------QQYSSQGG----YASNGAPGQGPQS 49
+ EM+G++ RP+R+ ATPR +G+Q QY+ +ASN + +
Sbjct: 215 LHEMSGIWLGGRPIRVALATPR-GAGHQPVQMQQHLQYAPSAPMVPQFASNNSSSR--NI 271
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 109
D +N+T+FVGGL V++E L F +G I+S+KIP GKGCGFV+F+ RE AE A+
Sbjct: 272 YNDPTNSTVFVGGLAAGVSEETLFTLFEPFGSISSIKIPRGKGCGFVKFSTREEAENAIS 331
Query: 110 KLNGTVIGKQSFRADYG-----NQWSGAYYGGQ-------VYDGYG-----YAIPP 148
++G +IG R +G NQ + ++ Q V+D G Y IPP
Sbjct: 332 GMHGFLIGGSRVRLSWGRSSLPNQHTHSHPHPQHLMMSPGVFDPMGRNGGMYGIPP 387
Score = 43.1 bits (100), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEALH 109
++FVG L P+ T+ L F Y I SV++ + GFV+F E+ + ALH
Sbjct: 157 SLFVGDLSPSTTEAHLLALFQPNYSSIQSVRVMTDPATGSSRCFGFVRFTEEEDRQRALH 216
Query: 110 KLNGTVIGKQSFRA 123
+++G +G + R
Sbjct: 217 EMSGIWLGGRPIRV 230
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 18/99 (18%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK-----------------GCGFVQFA 99
T+++G L+P +E++ Q + Q G+ VK+ + G FV+F
Sbjct: 53 TLWMGDLEPWWVEENIIQLWQQLGQSVRVKLIRSRHNRSPNPNSSLPPPQNAGYCFVEFE 112
Query: 100 NRENAEEALHKLNGTVIGKQSFRADYGNQWSGAYYGGQV 138
E+A +AL LNG+++ + S R N SG Q+
Sbjct: 113 RHEDALQAL-ALNGSIVPRSSGRLFRLNWASGPTLQSQI 150
>gi|146421272|ref|XP_001486586.1| hypothetical protein PGUG_02257 [Meyerozyma guilliermondii ATCC
6260]
Length = 681
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 78/170 (45%), Gaps = 44/170 (25%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR---KSSGYQQQYSSQGG------YASNGAPG------- 44
+ EMNG + RP+R+ ATPR K G+Q Y GG Y GAPG
Sbjct: 229 LVEMNGAWFGGRPLRVALATPRSSGKRFGFQNMYPFWGGGAPYYPYGYAGAPGLPDYGNM 288
Query: 45 ----------------------------QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
Q D +NTT+FVGGL +V ++ L F
Sbjct: 289 GGLNEEDDYGGAPPPPPPPPPPGQIPYPPPVQQYTDPNNTTVFVGGLSSDVNEQTLFTLF 348
Query: 77 SQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
Q+G I +KIP GK CGFV++ NRE+AEEA+ + G +IG R +G
Sbjct: 349 KQFGIIQQIKIPPGKNCGFVKYTNREDAEEAIASMQGFIIGGNRVRLSWG 398
>gi|190346145|gb|EDK38159.2| hypothetical protein PGUG_02257 [Meyerozyma guilliermondii ATCC
6260]
Length = 681
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 78/170 (45%), Gaps = 44/170 (25%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR---KSSGYQQQYSSQGG------YASNGAPGQ------ 45
+ EMNG + RP+R+ ATPR K G+Q Y GG Y GAPG
Sbjct: 229 LVEMNGAWFGGRPLRVALATPRSSGKRFGFQNMYPFWGGGAPYYPYGYAGAPGSPDYGNM 288
Query: 46 -----------------------------GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
Q D +NTT+FVGGL +V ++ L F
Sbjct: 289 GGLNEEDDYGGAPPPPPPPPPPGQIPYPPPVQQYTDPNNTTVFVGGLSSDVNEQTLFTLF 348
Query: 77 SQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
Q+G I +KIP GK CGFV++ NRE+AEEA+ + G +IG R +G
Sbjct: 349 KQFGIIQQIKIPPGKNCGFVKYTNREDAEEAIASMQGFIIGGNRVRLSWG 398
>gi|340521165|gb|EGR51400.1| RNA-binding protein [Trichoderma reesei QM6a]
Length = 441
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 71/154 (46%), Gaps = 28/154 (18%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSS----------------------------GYQQQYS 32
+ EM GVYC +RPMRI ATP+ +
Sbjct: 220 LVEMQGVYCGNRPMRISTATPKNRGNHGFGHGHQGGPMMGGGMPQQQMWGGVQAFPYGGG 279
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG 92
N P D +NTT+FVGGL VT+++LR F +GEI VKIP GKG
Sbjct: 280 GAAAAGGNFNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKG 339
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
CGFVQF +R AE A++++ G IG R +G
Sbjct: 340 CGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWG 373
>gi|156843736|ref|XP_001644934.1| hypothetical protein Kpol_530p46 [Vanderwaltozyma polyspora DSM
70294]
gi|156115587|gb|EDO17076.1| hypothetical protein Kpol_530p46 [Vanderwaltozyma polyspora DSM
70294]
Length = 587
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 79/166 (47%), Gaps = 42/166 (25%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR------------------------------------KS 24
++EMNGV+C RP+R+ ATPR K+
Sbjct: 287 LSEMNGVWCQGRPLRVAYATPRNNNNIISNQQNTATQLSHHGNSYHNNSHNNGNNRSRKN 346
Query: 25 SGYQQQYSSQGGYASNGAPGQGPQ-SEGDSSN---TTIFVGGLDPNVTDEDLRQPFSQYG 80
S Y Q Y +N GQ PQ S+ +S N +T+F+GGL P + + +R F +G
Sbjct: 347 SSSILNY--QNNYTANTNHGQPPQLSKSNSQNELVSTVFIGGLSPKINESQVRSLFKPFG 404
Query: 81 EIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
I +VK+P GK CGFV+F NR +AE A+ L G ++ R +G
Sbjct: 405 NIVNVKLPPGKNCGFVKFENRIDAEAAIQGLQGFIVAGNPIRLSWG 450
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PV---GKGCGFVQFANRENAEEALH 109
++FVG L P T+ DL F QY + +V++ P+ + GF++F +++ + AL
Sbjct: 229 SLFVGDLSPTATEADLLSLFQQQYRSVKTVRVMTDPITGASRCFGFIRFGDQDERKRALS 288
Query: 110 KLNGTVIGKQSFRADYG 126
++NG + R Y
Sbjct: 289 EMNGVWCQGRPLRVAYA 305
>gi|440795338|gb|ELR16465.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 424
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 70/122 (57%), Gaps = 5/122 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQS-----EGDSSN 55
MTEM G+ SR +R+ ATP+KSS G G G G S + D SN
Sbjct: 193 MTEMQGMMLGSRALRLSQATPKKSSSMGGGMGMPMGMPMGGGGGGGGHSAPMPEQADPSN 252
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TTIFVG LD V +++LR F +GE+ V++P GK CGFVQF +R AE A+ +++G
Sbjct: 253 TTIFVGNLDSTVGEDELRGHFMPFGELVYVRVPPGKNCGFVQFVHRSCAENAMLRVHGKT 312
Query: 116 IG 117
IG
Sbjct: 313 IG 314
>gi|449302980|gb|EMC98988.1| hypothetical protein BAUCODRAFT_386817 [Baudoinia compniacensis
UAMH 10762]
Length = 431
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 79/146 (54%), Gaps = 20/146 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSS-------------------GYQQQYSSQGGYASNG 41
+ EM GVYC +RPMRI ATP+ S G Q S GG
Sbjct: 234 LHEMQGVYCGNRPMRISTATPKNKSGGGGPGMGGMPGGMQPGMYGMGQPPMSGGGGGGGY 293
Query: 42 APGQGPQSE-GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
P Q P ++ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF +
Sbjct: 294 YPQQQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVH 353
Query: 101 RENAEEALHKLNGTVIGKQSFRADYG 126
R AE A++++ G IG R +G
Sbjct: 354 RHAAEMAINQMQGYPIGNSRVRLSWG 379
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 14/113 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ ++S GG A +GP+ +IFVG L P V + L F
Sbjct: 143 GQMIPNSNRQFKLNWASGGGLADRSRDDRGPE-------YSIFVGDLGPEVNEYVLMSLF 195
Query: 77 S-QYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
+Y S KI P+ +G GFV+F++ ++ ++ALH++ G G + R
Sbjct: 196 QGKYNSCKSAKIMSDPISGMSRGYGFVRFSDEQDQQKALHEMQGVYCGNRPMR 248
>gi|358380439|gb|EHK18117.1| hypothetical protein TRIVIDRAFT_117191, partial [Trichoderma virens
Gv29-8]
Length = 417
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 75/153 (49%), Gaps = 27/153 (17%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGA------------------ 42
+ EM GVYC +RPMRI ATP+ + + QGG G
Sbjct: 201 LVEMQGVYCGNRPMRISTATPKNRGNHGFGHGHQGGPMMGGGMPQQQMWGGVQGFPYGGG 260
Query: 43 ---------PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
P D +NTT+FVGGL VT+++LR F +GEI VKIP GKGC
Sbjct: 261 AGAGGGGFNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGC 320
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
GFVQF +R AE A++++ G IG R +G
Sbjct: 321 GFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWG 353
>gi|327296686|ref|XP_003233037.1| hypothetical protein TERG_06034 [Trichophyton rubrum CBS 118892]
gi|326464343|gb|EGD89796.1| hypothetical protein TERG_06034 [Trichophyton rubrum CBS 118892]
Length = 224
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 75/164 (45%), Gaps = 49/164 (29%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAP----------------- 43
++EM GVYC +RPMRI ATP+ G A G P
Sbjct: 27 LSEMQGVYCGNRPMRISTATPKNK-----------GPAGPGGPAHMGVPGGPPGGMYPPS 75
Query: 44 ------------------GQGPQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEI 82
G PQ D +NTT+FVGGL VT+++LR F +GEI
Sbjct: 76 MGGAGGPPGPGGPQMGYYGAAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEI 135
Query: 83 ASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
VKIP GKGCGFVQF R AE A++++ G IG R +G
Sbjct: 136 TYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWG 179
>gi|302656875|ref|XP_003020176.1| hypothetical protein TRV_05751 [Trichophyton verrucosum HKI 0517]
gi|291183977|gb|EFE39558.1| hypothetical protein TRV_05751 [Trichophyton verrucosum HKI 0517]
Length = 281
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 71/154 (46%), Gaps = 27/154 (17%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKS---------------------------SGYQQQYSS 33
++EM GVYC +RPMRI ATP+
Sbjct: 87 LSEMQGVYCGNRPMRISTATPKNKGPAGPGGPAHMGVPGGPPGGMYPPSMGGAGGPPGPG 146
Query: 34 QGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
GA Q D +NTT+FVGGL VT+++LR F +GEI VKIP GKGC
Sbjct: 147 GPQMGYYGAAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGC 206
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGN 127
GFVQF R AE A++++ G IG R +G
Sbjct: 207 GFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGR 240
>gi|302511659|ref|XP_003017781.1| hypothetical protein ARB_04665 [Arthroderma benhamiae CBS 112371]
gi|291181352|gb|EFE37136.1| hypothetical protein ARB_04665 [Arthroderma benhamiae CBS 112371]
Length = 428
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 75/164 (45%), Gaps = 49/164 (29%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAP----------------- 43
++EM GVYC +RPMRI ATP+ G A G P
Sbjct: 234 LSEMQGVYCGNRPMRISTATPKNK-----------GPAGPGGPAHMGVPGGPPGGMYPPS 282
Query: 44 ------------------GQGPQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEI 82
G PQ D +NTT+FVGGL VT+++LR F +GEI
Sbjct: 283 MGGAGGPPGPGGPQMGYYGAAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEI 342
Query: 83 ASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
VKIP GKGCGFVQF R AE A++++ G IG R +G
Sbjct: 343 TYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWG 386
>gi|315043939|ref|XP_003171345.1| RNA-binding post-transcriptional regulator csx1 [Arthroderma
gypseum CBS 118893]
gi|311343688|gb|EFR02891.1| RNA-binding post-transcriptional regulator csx1 [Arthroderma
gypseum CBS 118893]
Length = 412
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 75/164 (45%), Gaps = 49/164 (29%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAP----------------- 43
++EM GVYC +RPMRI ATP+ G A G P
Sbjct: 215 LSEMQGVYCGNRPMRISTATPKNK-----------GPAGPGGPAHMGVPGGPPGGMYPPS 263
Query: 44 ------------------GQGPQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEI 82
G PQ D +NTT+FVGGL VT+++LR F +GEI
Sbjct: 264 MGGAGGPPGPGGPQMGYYGAAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEI 323
Query: 83 ASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
VKIP GKGCGFVQF R AE A++++ G IG R +G
Sbjct: 324 TYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWG 367
>gi|403214377|emb|CCK68878.1| hypothetical protein KNAG_0B04440 [Kazachstania naganishii CBS
8797]
Length = 397
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 77/148 (52%), Gaps = 22/148 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSG----YQQQYSSQGGYASNGAPGQGPQSE------ 50
+ EM GV+ + R +++G ++ + +SG Q + GG G P S
Sbjct: 217 LAEMQGVFLNGRALKVGMSSGQSNSGAGGSRQVGHDRYGGSKPAGGKSNTPNSALFSQFM 276
Query: 51 ------------GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
D +NTT+F+GGL P V +E+LRQ F +GEI VKIPVGKGCGFVQ+
Sbjct: 277 YPIQQQPALNHFTDPNNTTVFIGGLSPLVKEEELRQYFQPFGEIVYVKIPVGKGCGFVQY 336
Query: 99 ANRENAEEALHKLNGTVIGKQSFRADYG 126
+R +AE A+ ++ G I R +G
Sbjct: 337 IDRISAETAISQMQGFPISNSRVRLSWG 364
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 68/141 (48%), Gaps = 10/141 (7%)
Query: 37 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDL------RQPFSQYGEIA-SVKIPV 89
+AS+ AP S +N +IFVG L PNVT+ L R P +++ ++ + V
Sbjct: 139 WASSSAPSTAGVSTTGGNNFSIFVGDLAPNVTEAQLFDLFISRYPSTEHAKVVIDLSTGV 198
Query: 90 GKGCGFVQFANRENAEEALHKLNGTVIGKQSFRA--DYGNQWSGAYYGGQV-YDGYGYAI 146
KG GF++F + + + AL ++ G + ++ + G SGA QV +D YG +
Sbjct: 199 SKGYGFIRFRDPADQQTALAEMQGVFLNGRALKVGMSSGQSNSGAGGSRQVGHDRYGGSK 258
Query: 147 PPPNDPSMYAAAAAAYGAYPV 167
P + +A + YP+
Sbjct: 259 PAGGKSNTPNSALFSQFMYPI 279
>gi|298706390|emb|CBJ29399.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 434
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 66/127 (51%), Gaps = 17/127 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+T MNG C RP+R+ AT R S GQ D SNTT+FV
Sbjct: 166 LTAMNGAECCGRPIRVAPATKRTS-----------------VQGQTGAHATDPSNTTVFV 208
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG++ +VT++ LR F+ GEI +V P G+GC FV FA+R +AE ++ + GT +
Sbjct: 209 GGINDSVTEKVLRDTFNSAGEIQTVTTPPGRGCAFVTFAHRASAEHVINNMQGTTVCGSC 268
Query: 121 FRADYGN 127
R +G
Sbjct: 269 VRLSWGK 275
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALH 109
++FVG L P VTD +L+ F +Y + K+ K GF++F + + +EAL
Sbjct: 108 SVFVGDLSPEVTDAELKATFLGKYTSVLGAKVVTNPMTGSSKSFGFIRFGDEQERDEALT 167
Query: 110 KLNG 113
+NG
Sbjct: 168 AMNG 171
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQY-GEIASVKIP------VGKGCGFVQFAN 100
Q E S+ T+++G + P+ T+E + FS G+ VK+ + G GF+ F N
Sbjct: 8 QDENRSAAKTLWLGDVQPDWTEEYVESLFSSIVGQELEVKLIRDRHRGIVAGYGFIDFRN 67
Query: 101 RENAEEALHKLNGTVIGKQSFRADYGNQW 129
E A+ L LNG I S R Y W
Sbjct: 68 HETAQLVLDSLNGKPIEGTSLR--YRLNW 94
>gi|213406019|ref|XP_002173781.1| RNA-binding post-transcriptional regulator csx1
[Schizosaccharomyces japonicus yFS275]
gi|212001828|gb|EEB07488.1| RNA-binding post-transcriptional regulator csx1
[Schizosaccharomyces japonicus yFS275]
Length = 680
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 74/153 (48%), Gaps = 27/153 (17%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGA------------------ 42
++EM G C RP+RI A+PR + ++ G AS
Sbjct: 243 LSEMQGYLCHGRPLRISVASPRSRTSISADSTTPTGAASTANGGAAASSSAVATGVTGVP 302
Query: 43 --------PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG 94
P QG S D NTT+FVGGL T++DL FS +G I ++KIP GKGCG
Sbjct: 303 SSSSSTRQPDQGLCSI-DPFNTTVFVGGLFSGATEKDLFYHFSPFGNILNIKIPPGKGCG 361
Query: 95 FVQFANRENAEEALHKLNGTVIGKQSFRADYGN 127
FVQ+ + AE+A+ + G ++G R +G+
Sbjct: 362 FVQYTEKAAAEKAITMMQGALVGPSHIRLAWGH 394
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 14/109 (12%)
Query: 21 PRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQY 79
PR S ++ +++ GG + + P+ ++FVG LDP + +L F S Y
Sbjct: 156 PRTHSVFKLNWATGGGIQHSAKTRREPE-------YSVFVGDLDPETHEAELYHTFHSVY 208
Query: 80 GEIASVKI---PV---GKGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
S KI PV + GFV+F++ + AL ++ G + + R
Sbjct: 209 PSCTSAKIIIDPVTGMSRKYGFVRFSDEREQQRALSEMQGYLCHGRPLR 257
>gi|290997888|ref|XP_002681513.1| predicted protein [Naegleria gruberi]
gi|284095137|gb|EFC48769.1| predicted protein [Naegleria gruberi]
Length = 292
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 64/126 (50%), Gaps = 8/126 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEM GVY SSRP++I AT + SQG + NTT++V
Sbjct: 168 MTEMQGVYISSRPVKISHAT--------NNFKSQGALEDLMPTTIITTDPLEQENTTVYV 219
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G L PN ++ LR+ F YG I SVKIP CGF+ F E+AE A+ ++NG I
Sbjct: 220 GNLSPNTDEKILREFFQGYGPITSVKIPTNSNCGFINFTRTEHAERAIIEMNGIEIQGNR 279
Query: 121 FRADYG 126
R +G
Sbjct: 280 VRVSWG 285
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGF 95
PG P S G + +IFVG L P+V D L Q F ++Y + K+ + KG GF
Sbjct: 96 PGGKPSSGGKENIVSIFVGDLAPDVNDYMLEQTFRNRYPSVRGAKVVMDPKSGISKGYGF 155
Query: 96 VQFANRENAEEALHKLNGTVIGKQSFRADYG 126
V+FA+ ++ ++ ++ G I + + +
Sbjct: 156 VKFADEDDMMRSMTEMQGVYISSRPVKISHA 186
>gi|328769877|gb|EGF79920.1| hypothetical protein BATDEDRAFT_19794 [Batrachochytrium
dendrobatidis JAM81]
Length = 470
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 78/152 (51%), Gaps = 21/152 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSS---------GY----QQQYSSQGGYASNGA----- 42
+ ++ G SRP+R+ ATP+ + GY + G N A
Sbjct: 163 LVDLQGQMIGSRPVRVSIATPKHKALGSNGHGMPGYYPIPPSYMDASGAMIPNSAHMIYR 222
Query: 43 -PGQGPQSEG--DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
P Q G D +N+TIF+G L +T++DLR+ F +GEI KIP GK CGFVQF
Sbjct: 223 QPVYMHQHLGGNDPTNSTIFIGALPATMTNDDLRKHFLPFGEIVYTKIPFGKRCGFVQFI 282
Query: 100 NRENAEEALHKLNGTVIGKQSFRADYGNQWSG 131
+R++AE A+ +++G VIG + R +G G
Sbjct: 283 HRQSAEMAIQEMDGKVIGGSALRLSWGRSQRG 314
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 9/76 (11%)
Query: 47 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG------FVQFAN 100
P+S G S T+++G L P + + +RQ + GE +VK+ K G FV+F++
Sbjct: 6 PESSGGS---TLWMGDLLPWMDEHFIRQTWRLLGESVTVKMIKDKSTGSLAGYCFVEFSS 62
Query: 101 RENAEEALHKLNGTVI 116
+ A + L +NGT+I
Sbjct: 63 SDVAAKLLELVNGTLI 78
Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 9/100 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPVG------KGCGFVQFANRENAEEALH 109
+IFVG L + D L Q F + Y + S ++ + KG GFV+F + + +++L
Sbjct: 105 SIFVGDLAHEINDILLMQVFHERYPSVKSARVVIDPTTGSPKGYGFVRFGSEADQQQSLV 164
Query: 110 KLNGTVIGKQSFRADYGNQWSGAY-YGGQVYDGYGYAIPP 148
L G +IG + R A G GY Y IPP
Sbjct: 165 DLQGQMIGSRPVRVSIATPKHKALGSNGHGMPGY-YPIPP 203
>gi|320165313|gb|EFW42212.1| nucleic acid binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 1042
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 54/77 (70%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
DS NTT++VGGL P+V+ E+L+ FS +G+I V+IP GK CGFVQFA NAE+A+ L
Sbjct: 580 DSINTTVYVGGLSPHVSAEELKAIFSLFGDIVGVRIPQGKACGFVQFAQHGNAEQAIAHL 639
Query: 112 NGTVIGKQSFRADYGNQ 128
NG IG Q R +G+
Sbjct: 640 NGQYIGGQPIRLSWGHH 656
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPVG-----KGCGFVQFANRENAEEALHK 110
++FVG L +VTD L F Q Y + K+ V KG GFV+F + + AL +
Sbjct: 97 SLFVGDLTADVTDFQLHSFFKQLYASCKTAKVVVDQAGTPKGFGFVRFTDSNDCLRALLE 156
Query: 111 LNGTV 115
+NG V
Sbjct: 157 MNGAV 161
>gi|308801969|ref|XP_003078298.1| DNA-binding protein (ISS) [Ostreococcus tauri]
gi|116056749|emb|CAL53038.1| DNA-binding protein (ISS) [Ostreococcus tauri]
Length = 452
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 67/136 (49%), Gaps = 27/136 (19%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D NTTIF+G LD NVT+E LR F ++GEIA K KGCGFV F +R++A EA+ L
Sbjct: 296 DPQNTTIFIGNLDHNVTEEHLRVVFEEFGEIAYAKATPKKGCGFVHFFDRQDATEAIENL 355
Query: 112 NGTVIGKQSFRADYGNQ------------------WSGAYYGGQVYDGYGYAIPPPNDPS 153
+G++IG + R +G SG Y GG + PP P
Sbjct: 356 HGSMIGSKRVRLSWGRHNATKCAIASMYQQQYPPVQSGMYMGG---------VMPPMVPG 406
Query: 154 MYAAAAAAYGAYPVYG 169
M +A + +YG
Sbjct: 407 MVMPMTSAASVWSMYG 422
>gi|444313983|ref|XP_004177649.1| hypothetical protein TBLA_0A03300 [Tetrapisispora blattae CBS 6284]
gi|387510688|emb|CCH58130.1| hypothetical protein TBLA_0A03300 [Tetrapisispora blattae CBS 6284]
Length = 362
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 70/134 (52%), Gaps = 14/134 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASN--------GAPGQGPQSEGD 52
+ E+ G++ S +A P + +QY+ Y+++ + S D
Sbjct: 198 LVELQGIHLSQ------SALPLTILQFTKQYTLSHSYSNSPSPLLFSSHSLSSSSSSLED 251
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
+NTT+F+GGL VT+ +LR F +GEI VKIP GKGCGFVQ+ R+ AE A+HK+
Sbjct: 252 PTNTTVFIGGLSSLVTENELRSLFQPFGEIVYVKIPFGKGCGFVQYETRKAAELAIHKMK 311
Query: 113 GTVIGKQSFRADYG 126
G I R +G
Sbjct: 312 GVSIKNSKIRLSWG 325
>gi|384244508|gb|EIE18010.1| hypothetical protein COCSUDRAFT_31894 [Coccomyxa subellipsoidea
C-169]
Length = 407
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 78/146 (53%), Gaps = 19/146 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQ------QQYSSQG-GYASNGAPG----QGPQS 49
+TEM+G +SRP+R+ AT +KS Q + + GAP Q S
Sbjct: 161 LTEMSGHVINSRPIRVSIATAKKSQTATMLPKQCQNFDFENFRLRVQGAPAPVASQPHPS 220
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 109
+ D +NTT+F+GGL V+++DLR F ++G+I KIP GKGCGFVQF R AE A+
Sbjct: 221 DYDPNNTTLFIGGLSSGVSEDDLRVLFGRFGDIVYTKIPPGKGCGFVQFVQRPAAESAMA 280
Query: 110 K--------LNGTVIGKQSFRADYGN 127
+ L G ++G + R +G
Sbjct: 281 QMQARCSPSLFGQILGGSTIRISWGR 306
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQY-GEIASVKI---PV---GKGCGFVQFANRENAEE 106
S+ ++FVG L P+VTD L++ F Q+ + S K+ P+ KG GFV+F N +
Sbjct: 100 SDYSVFVGDLAPDVTDYALQEHFRQFFASVRSAKVITDPLTGRSKGYGFVRFGNEAERDR 159
Query: 107 ALHKLNGTVIGKQSFRA 123
+L +++G VI + R
Sbjct: 160 SLTEMSGHVINSRPIRV 176
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEALHK 110
T+++G L + + + F G + SVKI V +G GFV+FA E AE+ L
Sbjct: 12 TLWMGDLAYWMDESFIYSIFVGTGNLVSVKIIRNKNTAVSEGYGFVEFATHEAAEQVLRT 71
Query: 111 LNGTVI--GKQSFRADYG 126
NG I Q FR ++
Sbjct: 72 FNGCPIPNTDQIFRLNWA 89
>gi|363755816|ref|XP_003648124.1| hypothetical protein Ecym_8010 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891324|gb|AET41307.1| Hypothetical protein Ecym_8010 [Eremothecium cymbalariae
DBVPG#7215]
Length = 602
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 75/156 (48%), Gaps = 30/156 (19%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKS------SGYQQQYS---------SQGGYASNGAPGQ 45
+ EM GV+ + R +R+ + KS SG + + G +P
Sbjct: 201 LVEMQGVFLNGRAIRVSTTSKNKSRFRGGLSGTVTSAAAATAGPPVGNLSGVIQTSSPQT 260
Query: 46 GPQSE---------------GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG 90
PQ D +NTT+F+GGL VT+E+LR F +G+I VKIPVG
Sbjct: 261 LPQQSQFIYPVQQQPVLSQFTDPNNTTVFIGGLSSLVTEEELRAYFQPFGQIVYVKIPVG 320
Query: 91 KGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
KGCGFVQ+ +R +AE A+ K+ G IG R +G
Sbjct: 321 KGCGFVQYVDRSSAENAIAKMQGFPIGNSRIRLSWG 356
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEEALH 109
+IFVG L PNV++ L + F S+Y + KI V KG GFV+F N + +L
Sbjct: 143 SIFVGDLAPNVSESQLFELFISRYSSTLNAKIVFDQVTGVSKGYGFVKFGNEAEQQRSLV 202
Query: 110 KLNGTVIGKQSFRADYGNQWSGAYYGG 136
++ G + ++ R ++ + GG
Sbjct: 203 EMQGVFLNGRAIRVSTTSKNKSRFRGG 229
>gi|384487643|gb|EIE79823.1| hypothetical protein RO3G_04528 [Rhizopus delemar RA 99-880]
Length = 162
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 70/124 (56%), Gaps = 19/124 (15%)
Query: 4 MNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGG 62
M G SRP+R+ ATP+ ++S +Q ++S ++TT+F+GG
Sbjct: 1 MQGYVIGSRPIRVSTATPKQRTSSNKQSFTS------------------SINSTTVFIGG 42
Query: 63 LDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
L + +++LR F+ +G+I VKIP GKGCGFVQ+ R +AE A+ ++NG IG R
Sbjct: 43 LSTPIKEDELRHYFAPFGDIIYVKIPQGKGCGFVQYTTRSSAELAIQQMNGYQIGTSRIR 102
Query: 123 ADYG 126
+G
Sbjct: 103 LSWG 106
>gi|323450795|gb|EGB06674.1| hypothetical protein AURANDRAFT_28594, partial [Aureococcus
anophagefferens]
Length = 319
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 69/126 (54%), Gaps = 1/126 (0%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M EM+G Y R +R AT R+ + + + Q + + P++ + NT +FV
Sbjct: 195 MNEMHGQYVGERAIRCTLATTREEREREAKMNQQQ-QMYDPSRLHAPKATEEGENTCVFV 253
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLD +V+ + LR F G+IA ++IP G+GCGFV F +R+NAE A+ L G I
Sbjct: 254 GGLDESVSPDMLRHHFGLLGDIAYIRIPPGRGCGFVGFVHRKNAEAAISTLQGLRINGYK 313
Query: 121 FRADYG 126
R +G
Sbjct: 314 VRLSWG 319
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 10/85 (11%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQF 98
GP + D S IFVG LD VT++ L F++ Y I S K+ + KG GF++F
Sbjct: 129 GPPPQADWS---IFVGDLDYTVTEQQLHGAFAKKYRSILSTKLVIDMSTGLSKGFGFIKF 185
Query: 99 ANRENAEEALHKLNGTVIGKQSFRA 123
+ + A+++++G +G+++ R
Sbjct: 186 GSEAERDSAMNEMHGQYVGERAIRC 210
>gi|388851881|emb|CCF54475.1| related to NAM8-meiotic recombination protein [Ustilago hordei]
Length = 926
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
S D +NTT+FVGGL ++++ LR+ F +GEI VKIP GKGCGFVQ+ +++AE A+
Sbjct: 588 SAADPNNTTVFVGGLSSLISEQTLRRYFEHFGEITYVKIPPGKGCGFVQYVRKQDAENAI 647
Query: 109 HKLNGTVIGKQSFRADYG 126
H++NG I R +G
Sbjct: 648 HRMNGFPILNSKIRLSWG 665
>gi|45184976|ref|NP_982694.1| AAR151Wp [Ashbya gossypii ATCC 10895]
gi|44980597|gb|AAS50518.1| AAR151Wp [Ashbya gossypii ATCC 10895]
Length = 481
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 76/176 (43%), Gaps = 50/176 (28%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK------------------------------------- 23
+ EMNGV+C R +R+ ATPR
Sbjct: 221 LAEMNGVWCQGRQLRVAYATPRNNLLQQQQAHPAPPAPPSPPAPPAQTLPDSLGLLVGVP 280
Query: 24 --------SSGYQQQYSSQGG----YASNGAPGQGP-QSEGDSSNTTIFVGGLDPNVTDE 70
S G QQ G SN P P Q D++NTT+F+GGL +++
Sbjct: 281 SLAQLDAASLGRAQQPLLLGAAGSLVGSNSLPLAAPRQLPADTANTTVFIGGLSNMISEG 340
Query: 71 DLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
L F +G I SVK+P G+GCGFV+F NR +AE A+ + G ++G + R +G
Sbjct: 341 QLHALFMPFGNILSVKVPPGRGCGFVRFENRMDAEAAIQGMQGFIVGGNAIRLSWG 396
>gi|50288915|ref|XP_446887.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526196|emb|CAG59820.1| unnamed protein product [Candida glabrata]
Length = 555
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 72/149 (48%), Gaps = 23/149 (15%)
Query: 1 MTEMNGVYCSSRPMRIG------------------AATPRKSSGYQQQYSSQGGYA---- 38
+ EM G + + R ++IG A S+G QQ S G
Sbjct: 249 LVEMQGCFLNGRAIKIGIAGGNNNNNSNSNYNNQRMANDNISNGLGQQSRSLNGQLPQQF 308
Query: 39 SNGAPGQGPQSE-GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQ 97
N P Q + D +NTT+FVGGL P VT+++LR F +G I VKIP GKGCGFVQ
Sbjct: 309 VNATPQQPVLNHFTDPNNTTVFVGGLSPLVTEDELRSYFEPFGTIIYVKIPAGKGCGFVQ 368
Query: 98 FANRENAEEALHKLNGTVIGKQSFRADYG 126
+ R +AE A+ K+ G I R +G
Sbjct: 369 YVERSSAETAITKMQGFPIANSRVRLSWG 397
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEE 106
+N +IFVG L P+VT+ L F ++Y K+ + KG GFV+F + + +
Sbjct: 188 TNNSIFVGDLAPSVTEAQLFDLFINKYPSTVHAKVMYDQLTGISKGYGFVKFKSSMDQQR 247
Query: 107 ALHKLNGTVIGKQSFR 122
AL ++ G + ++ +
Sbjct: 248 ALVEMQGCFLNGRAIK 263
>gi|374105894|gb|AEY94805.1| FAAR151Wp [Ashbya gossypii FDAG1]
Length = 475
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 76/176 (43%), Gaps = 50/176 (28%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK------------------------------------- 23
+ EMNGV+C R +R+ ATPR
Sbjct: 221 LAEMNGVWCQGRQLRVAYATPRNNLLQQQQAHPAPPAPPSPPAPPAQTLPDSLGLLVGVP 280
Query: 24 --------SSGYQQQYSSQGG----YASNGAPGQGP-QSEGDSSNTTIFVGGLDPNVTDE 70
S G QQ G SN P P Q D++NTT+F+GGL +++
Sbjct: 281 SLAQLDAASLGRAQQPLLLGAAGSLVGSNSLPLAAPRQLPADTANTTVFIGGLSNMISEG 340
Query: 71 DLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
L F +G I SVK+P G+GCGFV+F NR +AE A+ + G ++G + R +G
Sbjct: 341 QLHALFMPFGNILSVKVPPGRGCGFVRFENRMDAEAAIQGMQGFIVGGNAIRLSWG 396
>gi|393229322|gb|EJD36947.1| hypothetical protein AURDEDRAFT_188233 [Auricularia delicata
TFB-10046 SS5]
Length = 893
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 51/78 (65%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
+ D NTT+FVGGL P V +E LR F+ +GEI VK+PVGK CGFVQF ++ +AE A+
Sbjct: 401 TSADPYNTTVFVGGLSPLVPEETLRTFFAPFGEIHYVKVPVGKHCGFVQFVHKADAERAI 460
Query: 109 HKLNGTVIGKQSFRADYG 126
K+ G IG R +G
Sbjct: 461 EKMQGFPIGGSKIRLSWG 478
>gi|409050510|gb|EKM59987.1| hypothetical protein PHACADRAFT_250820 [Phanerochaete carnosa
HHB-10118-sp]
Length = 643
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 51/78 (65%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
+ D NTT+FVGGL P +++E LR F+ +GEI VK+PVGK CGFVQF + +AE A+
Sbjct: 302 TSSDPYNTTVFVGGLSPLISEETLRTFFAPFGEIHYVKVPVGKHCGFVQFVRKPDAERAI 361
Query: 109 HKLNGTVIGKQSFRADYG 126
K+ G IG R +G
Sbjct: 362 EKMQGFPIGGSRIRLSWG 379
>gi|374107618|gb|AEY96526.1| FADR307Wp [Ashbya gossypii FDAG1]
Length = 565
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 52/75 (69%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+F+GGL VT+++LR F +G+I VKIPVGKGCGFVQ+ +R +AE A+ K+
Sbjct: 278 DPNNTTVFIGGLSSLVTEDELRAYFQPFGQIVYVKIPVGKGCGFVQYVDRSSAENAIAKM 337
Query: 112 NGTVIGKQSFRADYG 126
G IG R +G
Sbjct: 338 QGFPIGNSRVRLSWG 352
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEE 106
S +IFVG L PNVT+ L + F S+Y + KI V KG GFV+F N +
Sbjct: 139 SEFSIFVGDLAPNVTESQLFELFISRYSSTLNAKIVFDQGTGVSKGYGFVKFGNEAEQQR 198
Query: 107 ALHKLNGTVIGKQSFRA 123
+L ++ G + ++ R
Sbjct: 199 SLLEMQGVFLNGRAIRV 215
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 9/67 (13%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK--------GCGFVQFANREN 103
D+S+T +++G LDP+ T+ D++Q ++ GE A+V++ + K G FV+F +
Sbjct: 48 DTSSTQLYMGDLDPSWTEGDIKQIWATLGE-ANVQVKLIKNSSGGGNSGYCFVEFPSNLA 106
Query: 104 AEEALHK 110
A AL K
Sbjct: 107 ATNALLK 113
>gi|302307679|ref|NP_984403.2| ADR307Wp [Ashbya gossypii ATCC 10895]
gi|299789115|gb|AAS52227.2| ADR307Wp [Ashbya gossypii ATCC 10895]
Length = 566
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 52/75 (69%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+F+GGL VT+++LR F +G+I VKIPVGKGCGFVQ+ +R +AE A+ K+
Sbjct: 278 DPNNTTVFIGGLSSLVTEDELRAYFQPFGQIVYVKIPVGKGCGFVQYVDRSSAENAIAKM 337
Query: 112 NGTVIGKQSFRADYG 126
G IG R +G
Sbjct: 338 QGFPIGNSRVRLSWG 352
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEE 106
S +IFVG L PNVT+ L + F S+Y + KI V KG GFV+F N +
Sbjct: 139 SEFSIFVGDLAPNVTESQLFELFISRYSSTLNAKIVFDQGTGVSKGYGFVKFGNEAEQQR 198
Query: 107 ALHKLNGTVIGKQSFRA 123
+L ++ G + ++ R
Sbjct: 199 SLLEMQGVFLNGRAIRV 215
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 9/67 (13%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK--------GCGFVQFANREN 103
D+S+T +++G LDP+ T+ D++Q ++ GE A+V++ + K G FV+F +
Sbjct: 48 DTSSTQLYMGDLDPSWTEGDIKQIWATLGE-ANVQVKLIKNSSGGGNSGYCFVEFPSNLA 106
Query: 104 AEEALHK 110
A AL K
Sbjct: 107 ATNALLK 113
>gi|389747119|gb|EIM88298.1| hypothetical protein STEHIDRAFT_95374 [Stereum hirsutum FP-91666
SS1]
Length = 932
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 50/75 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D NTT+FVGGL P +++E LR F+ +GEI VK+PVGK CGFVQF + +AE A+ K+
Sbjct: 561 DPYNTTVFVGGLSPLISEETLRTFFAPFGEIHYVKVPVGKHCGFVQFVRKADAERAIEKM 620
Query: 112 NGTVIGKQSFRADYG 126
G IG R +G
Sbjct: 621 QGFPIGGSRIRLSWG 635
>gi|336373915|gb|EGO02253.1| hypothetical protein SERLA73DRAFT_86524 [Serpula lacrymans var.
lacrymans S7.3]
Length = 611
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 75/158 (47%), Gaps = 32/158 (20%)
Query: 1 MTEMNGVYCSSRP-----------MRIGAAT------------------PR---KSSGYQ 28
+ EM+G+YC SRP +++G T PR ++
Sbjct: 172 LIEMHGLYCLSRPTAQQYSSTNAAIKVGGVTTNPAGATFAPDGQDQNGAPRYMISEESWK 231
Query: 29 QQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP 88
++ + P + D NTT+FVGGL P +++E LR F+ +G+I VK+P
Sbjct: 232 HHAQARAILGNLIGPNGEQLTSTDPYNTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVP 291
Query: 89 VGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
VGK CGFVQF + +AE A+ K+ G IG R +G
Sbjct: 292 VGKHCGFVQFVRKADAERAIEKMQGFPIGGSRIRLSWG 329
>gi|50311447|ref|XP_455748.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644884|emb|CAG98456.1| KLLA0F14861p [Kluyveromyces lactis]
Length = 589
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 52/75 (69%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+F+GGL +T+++LR F +G+I VKIPVGKGCGFVQ+ +R +AE A+ K+
Sbjct: 312 DPNNTTVFIGGLSTLITEDELRSYFQPFGQIVYVKIPVGKGCGFVQYVDRISAETAISKM 371
Query: 112 NGTVIGKQSFRADYG 126
G IG R +G
Sbjct: 372 QGFPIGNSRIRLSWG 386
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 60/127 (47%), Gaps = 22/127 (17%)
Query: 5 NGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNG-APGQGPQSEGDSSNTTIFVGGL 63
N + S+ M+ G P S+ Y+ + +AS APG S T+FVG L
Sbjct: 112 NQMAASNALMKSGLRVPMDSN-----YALKLNWASFATAPG---------SEFTLFVGDL 157
Query: 64 DPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKLNGTVI 116
PNVT+ L + F S+Y + KI V KG GFV+F N + AL ++ GT +
Sbjct: 158 APNVTEAQLFELFISRYSSTLNAKIVFDQFTGVSKGYGFVKFVNEMEQQRALVEMQGTFL 217
Query: 117 GKQSFRA 123
++ R
Sbjct: 218 NGRAIRV 224
>gi|299748443|ref|XP_001839126.2| RNA-binding protein Csx1 [Coprinopsis cinerea okayama7#130]
gi|298407975|gb|EAU82695.2| RNA-binding protein Csx1 [Coprinopsis cinerea okayama7#130]
Length = 808
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 50/75 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D NTT+FVGGL P +++E LR F+ +G+I VK+PVGK CGFVQF + +AE A+ K+
Sbjct: 492 DPYNTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKADAERAIEKM 551
Query: 112 NGTVIGKQSFRADYG 126
G IG R +G
Sbjct: 552 QGFPIGGSKIRLSWG 566
>gi|403416664|emb|CCM03364.1| predicted protein [Fibroporia radiculosa]
Length = 948
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 51/78 (65%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
+ D NTT+FVGGL P +++E LR F+ +G+I VK+PVGK CGFVQF + +AE A+
Sbjct: 607 TSSDPYNTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKPDAERAI 666
Query: 109 HKLNGTVIGKQSFRADYG 126
K+ G IG R +G
Sbjct: 667 EKMQGFPIGGSRIRLSWG 684
>gi|115385346|ref|XP_001209220.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114196912|gb|EAU38612.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 306
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 76/147 (51%), Gaps = 23/147 (15%)
Query: 1 MTEMNGVYCSSRPMRIGAAT--PRKSSGYQQQYSSQGGYA-------------------S 39
+ + GVYC +P+ ++T P+++ G + GYA S
Sbjct: 113 LADRRGVYCG-KPLPCASSTAHPQETRGPRCCSPGANGYAPARTAACNLPDGPPPPIGPS 171
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
GAP Q D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF
Sbjct: 172 TGAP-QPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFV 230
Query: 100 NRENAEEALHKLNGTVIGKQSFRADYG 126
R AE A++++ G IG R +G
Sbjct: 231 QRHAAEMAINQMQGYPIGNSRVRLSWG 257
>gi|392568189|gb|EIW61363.1| hypothetical protein TRAVEDRAFT_26986 [Trametes versicolor
FP-101664 SS1]
Length = 950
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 50/78 (64%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
+ D NTT+FVGGL P + ++ LR F+ +GEI VK+PVGK CGFVQF + +AE A+
Sbjct: 613 TSSDPYNTTVFVGGLSPLINEDTLRTFFAPFGEIHYVKVPVGKHCGFVQFVRKPDAERAI 672
Query: 109 HKLNGTVIGKQSFRADYG 126
K+ G IG R +G
Sbjct: 673 EKMQGFPIGGSRIRLSWG 690
>gi|395329881|gb|EJF62266.1| hypothetical protein DICSQDRAFT_135856 [Dichomitus squalens
LYAD-421 SS1]
Length = 973
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 51/78 (65%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
+ D NTT+FVGGL P ++++ LR F+ +GEI VK+PVGK CGFVQF + +AE A+
Sbjct: 621 TSSDPYNTTVFVGGLSPLISEDTLRTFFAPFGEIHYVKVPVGKHCGFVQFVRKPDAERAI 680
Query: 109 HKLNGTVIGKQSFRADYG 126
K+ G IG R +G
Sbjct: 681 EKMQGFPIGGSRIRLSWG 698
>gi|392586871|gb|EIW76206.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 876
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 50/75 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D NTT+FVGGL P +++E LR F+ +G+I VK+P+GK CGFVQF + +AE A+ K+
Sbjct: 574 DPYNTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPIGKHCGFVQFVRKADAERAIEKM 633
Query: 112 NGTVIGKQSFRADYG 126
G IG R +G
Sbjct: 634 QGFPIGGSRIRLSWG 648
>gi|336386826|gb|EGO27972.1| hypothetical protein SERLADRAFT_414166 [Serpula lacrymans var.
lacrymans S7.9]
Length = 933
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 50/75 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D NTT+FVGGL P +++E LR F+ +G+I VK+PVGK CGFVQF + +AE A+ K+
Sbjct: 577 DPYNTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKADAERAIEKM 636
Query: 112 NGTVIGKQSFRADYG 126
G IG R +G
Sbjct: 637 QGFPIGGSRIRLSWG 651
>gi|406602666|emb|CCH45778.1| Nucleolysin TIA-1 isoform [Wickerhamomyces ciferrii]
Length = 485
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 75/159 (47%), Gaps = 33/159 (20%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK----------SSGYQQQYSSQGGYASNGAPGQ----- 45
+ EM G + RP+R+ A P+ Q + + +N P Q
Sbjct: 206 LVEMQGAILNGRPIRVSTAVPKNRQQQQGQQQGGGFNGNQGFNGSRFNNNLQPLQSSIPS 265
Query: 46 ----------GPQSE--------GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
G +S+ D +NTT+F+GGL VT+++LR F +G+I VKI
Sbjct: 266 SSGPSQQILNGLESQYQPPLTQFTDPNNTTVFIGGLSSIVTEDELRLYFQPFGDITYVKI 325
Query: 88 PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
PVGKGCGFVQ+ R +AE A+ K+ G IG R +G
Sbjct: 326 PVGKGCGFVQYVTRSSAELAISKMQGYPIGNSRIRLSWG 364
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENA 104
+ + +IFVG L P+V+D L + F S+Y ++ KI + KG GFV+F N
Sbjct: 143 NRNEVSIFVGDLAPDVSDTILYEYFGSKYPSVSGTKIMIDSLTGGSKGYGFVRFINELEQ 202
Query: 105 EEALHKLNGTVIGKQSFRA 123
+ AL ++ G ++ + R
Sbjct: 203 KRALVEMQGAILNGRPIRV 221
>gi|410079368|ref|XP_003957265.1| hypothetical protein KAFR_0D04830 [Kazachstania africana CBS 2517]
gi|372463850|emb|CCF58130.1| hypothetical protein KAFR_0D04830 [Kazachstania africana CBS 2517]
Length = 406
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 51/75 (68%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL VT+++LR+ F +G I VKIPVGKGCGFVQ+ +R +AE A+ K+
Sbjct: 240 DPNNTTVFVGGLSSLVTEDELREYFKPFGTIVYVKIPVGKGCGFVQYIDRVSAENAISKM 299
Query: 112 NGTVIGKQSFRADYG 126
G I R +G
Sbjct: 300 QGFPIANSRIRLSWG 314
Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 48 QSEGDSSN-TTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFA 99
Q+ ++SN +IFVG L PNVT+ L F ++Y KI V +G GFV+F
Sbjct: 104 QASSNASNGYSIFVGDLSPNVTEAQLFDLFINKYASTDHAKIVYDQATGVSRGYGFVRFN 163
Query: 100 NRENAEEALHKLNGTVIGKQSFR 122
+ + + AL ++ G + ++ +
Sbjct: 164 SLMDQQHALLEMQGIFLNGRAIK 186
>gi|443897314|dbj|GAC74655.1| FOG: RRM domain [Pseudozyma antarctica T-34]
Length = 979
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 51/78 (65%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
S D +NTT+FVGGL +++ LR+ F +GEI VKIP GKGCGFVQ+ +++AE A+
Sbjct: 577 SAADPNNTTVFVGGLSSLISESTLRRYFEHFGEITYVKIPPGKGCGFVQYVRKQDAENAI 636
Query: 109 HKLNGTVIGKQSFRADYG 126
++NG I R +G
Sbjct: 637 QRMNGFPILNSKIRLSWG 654
>gi|71005504|ref|XP_757418.1| hypothetical protein UM01271.1 [Ustilago maydis 521]
gi|46096901|gb|EAK82134.1| hypothetical protein UM01271.1 [Ustilago maydis 521]
Length = 1059
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 58/93 (62%), Gaps = 5/93 (5%)
Query: 34 QGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
QGG +SN S D +NTT+FVGGL +++ LR+ F +GEI+ VKIP GKGC
Sbjct: 604 QGGSSSNPN-----DSAADPNNTTVFVGGLSSLISEVTLRRYFEHFGEISYVKIPPGKGC 658
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
GFVQ+ +++AE A+ ++NG I R +G
Sbjct: 659 GFVQYVRKQDAETAIQRMNGFPILNSKIRLSWG 691
>gi|390601667|gb|EIN11061.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 877
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 50/75 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D NTT+FVGGL P ++++ LR F+ +G+I VK+PVGK CGFVQF + +AE A+ K+
Sbjct: 533 DPYNTTVFVGGLSPLISEDTLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKADAERAIEKM 592
Query: 112 NGTVIGKQSFRADYG 126
G IG R +G
Sbjct: 593 QGFPIGGSRIRLSWG 607
>gi|343427154|emb|CBQ70682.1| related to NAM8-meiotic recombination protein [Sporisorium
reilianum SRZ2]
Length = 968
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 51/78 (65%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
S D +NTT+FVGGL +++ LR+ F +GEI VKIP GKGCGFVQ+ +++AE A+
Sbjct: 572 SAADPNNTTVFVGGLSSLISEATLRRYFEHFGEITYVKIPPGKGCGFVQYVRKQDAENAI 631
Query: 109 HKLNGTVIGKQSFRADYG 126
++NG I R +G
Sbjct: 632 QRMNGFPILNSKIRLSWG 649
>gi|302696241|ref|XP_003037799.1| hypothetical protein SCHCODRAFT_83732 [Schizophyllum commune H4-8]
gi|300111496|gb|EFJ02897.1| hypothetical protein SCHCODRAFT_83732 [Schizophyllum commune H4-8]
Length = 759
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 50/75 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D NTT+FVGGL P ++++ LR F+ +G+I VK+PVGK CGFVQF + +AE A+ K+
Sbjct: 542 DPYNTTVFVGGLSPLISEDTLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKADAENAIEKM 601
Query: 112 NGTVIGKQSFRADYG 126
G IG R +G
Sbjct: 602 QGFPIGGSRIRLSWG 616
>gi|365984507|ref|XP_003669086.1| hypothetical protein NDAI_0C01820 [Naumovozyma dairenensis CBS 421]
gi|343767854|emb|CCD23843.1| hypothetical protein NDAI_0C01820 [Naumovozyma dairenensis CBS 421]
Length = 498
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 50/75 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL VT+E LR F +G I VKIP+GKGCGFVQ+ +R +AE A+ ++
Sbjct: 322 DPNNTTVFVGGLSSMVTEEQLRHCFQPFGTIIYVKIPIGKGCGFVQYFDRISAETAILRM 381
Query: 112 NGTVIGKQSFRADYG 126
G IG R +G
Sbjct: 382 QGFPIGNSRIRLSWG 396
>gi|255714705|ref|XP_002553634.1| KLTH0E03520p [Lachancea thermotolerans]
gi|238935016|emb|CAR23197.1| KLTH0E03520p [Lachancea thermotolerans CBS 6340]
Length = 516
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 51/75 (68%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+F+GGL V++++LR F +G I VKIPVGKGCGFVQ+ +R +AE A+ K+
Sbjct: 269 DPNNTTVFIGGLSSLVSEDELRAYFQPFGSIVYVKIPVGKGCGFVQYVDRISAETAIAKM 328
Query: 112 NGTVIGKQSFRADYG 126
G IG R +G
Sbjct: 329 QGYPIGNSRIRLSWG 343
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEEALH 109
++FVG + PNV++ L + F S+Y + KI V KG GFV+F + AL
Sbjct: 134 SVFVGDIAPNVSEAQLFELFISRYASTLNAKIVFDQMTGVSKGYGFVKFGQESEQQRALL 193
Query: 110 KLNGTVIGKQSFRA 123
++ G + ++ R
Sbjct: 194 EMQGVFLNGRAVRV 207
>gi|366996152|ref|XP_003677839.1| hypothetical protein NCAS_0H01810 [Naumovozyma castellii CBS 4309]
gi|342303709|emb|CCC71491.1| hypothetical protein NCAS_0H01810 [Naumovozyma castellii CBS 4309]
Length = 443
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 51/75 (68%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+F+GGL V+++DLRQ F +G+I VKIP GKGCGFVQ+ +R +AE A+ K+
Sbjct: 279 DPNNTTVFIGGLSSLVSEDDLRQYFQPFGDIIYVKIPTGKGCGFVQYVDRLSAELAISKM 338
Query: 112 NGTVIGKQSFRADYG 126
G + R +G
Sbjct: 339 QGFPLANSRIRLSWG 353
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDL------RQPFSQYGEIASVKIP-VGKGCGFVQFANR 101
+ G++S ++FVG L PNVT+ L R P + + ++ ++ V K GFV+F +
Sbjct: 130 ANGNNSGFSVFVGDLSPNVTEAQLFELFIGRYPSTCHAKVVHDQLTGVSKCYGFVKFNSA 189
Query: 102 ENAEEALHKLNGTVIGKQSFRA 123
+ + L ++ G + +S +
Sbjct: 190 TDQQRVLVEMQGVFLNGRSIKV 211
Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGE-------IASVKIPVGKGCGFVQFANRENA 104
++ ++ +++G LDPN + +RQ + GE + + + V +G FV+F + E+
Sbjct: 43 NTGSSQLYMGDLDPNWDENVIRQIWRDLGESNVHVKMMWNSNLGVNQGYCFVEFPSMEHG 102
Query: 105 EEALHKLNGTVI 116
AL K NG VI
Sbjct: 103 NNALLK-NGIVI 113
>gi|260940363|ref|XP_002614481.1| hypothetical protein CLUG_05259 [Clavispora lusitaniae ATCC 42720]
gi|238851667|gb|EEQ41131.1| hypothetical protein CLUG_05259 [Clavispora lusitaniae ATCC 42720]
Length = 651
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 74/173 (42%), Gaps = 47/173 (27%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY-----ASNGAPGQGPQSE----- 50
+ EMNG + RP+R+ ATPR ++ ++ + Y A +P PQ
Sbjct: 249 LREMNGAWFGGRPLRVALATPRNTALLRKSPDQKNMYSGLSPAVPQSPAMIPQEFMYMGG 308
Query: 51 -------------------------------------GDSSNTTIFVGGLDPNVTDEDLR 73
D SNTT+FVGGL V+++ L
Sbjct: 309 PQGSGGPPGPMNSSYGYFPPMMGDKNEFGMNMAGHPYSDPSNTTVFVGGLRSEVSEQTLF 368
Query: 74 QPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
F +G I +KIP GK CGF++++ RE AEEA+ + G +IG R +G
Sbjct: 369 TLFKPFGTIQQIKIPPGKNCGFLKYSTREEAEEAIQAMEGFIIGGNRVRLGWG 421
>gi|254577373|ref|XP_002494673.1| ZYRO0A07018p [Zygosaccharomyces rouxii]
gi|238937562|emb|CAR25740.1| ZYRO0A07018p [Zygosaccharomyces rouxii]
Length = 558
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 50/75 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL V +++LR F +G I VKIPVGKGCGFVQ+ +R +AE A+ K+
Sbjct: 279 DPNNTTVFVGGLSSLVAEDELRAYFQPFGTIVYVKIPVGKGCGFVQYVDRISAETAIAKM 338
Query: 112 NGTVIGKQSFRADYG 126
G IG R +G
Sbjct: 339 QGFPIGNSRVRLSWG 353
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEEALH 109
++FVG L PNVT+ L + F S++ + VKI V KG FV+F N + + AL
Sbjct: 146 SVFVGDLAPNVTESQLFELFISRFNSTSHVKIVYDQLTGVSKGYAFVKFTNPAHQQRALL 205
Query: 110 KLNGTVIGKQSFRA 123
++ G + ++ R
Sbjct: 206 EMQGIFLSGRAIRV 219
>gi|2130979|dbj|BAA11919.1| csx1+ [Schizosaccharomyces pombe]
Length = 125
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 58/90 (64%), Gaps = 1/90 (1%)
Query: 38 ASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQ 97
SN P Q S D NTT+FVGGL N++++DL+ F +G I ++KIP GKGCGFVQ
Sbjct: 12 TSNRQPNQDLCSM-DPLNTTVFVGGLASNLSEKDLQVCFQPFGRILNIKIPFGKGCGFVQ 70
Query: 98 FANRENAEEALHKLNGTVIGKQSFRADYGN 127
++ + AE+A++ + G ++G R +G+
Sbjct: 71 YSEKSAAEKAINTMQGALVGTSHIRLAWGH 100
>gi|238600700|ref|XP_002395212.1| hypothetical protein MPER_04772 [Moniliophthora perniciosa FA553]
gi|215465560|gb|EEB96142.1| hypothetical protein MPER_04772 [Moniliophthora perniciosa FA553]
Length = 200
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 49/75 (65%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D NTT+FVGGL P + ++ LR F+ +G+I VK+PVGK CGFVQF + +AE A+ K+
Sbjct: 113 DPYNTTVFVGGLSPLINEDTLRTFFAPFGDIHYVKVPVGKNCGFVQFVRKADAERAIEKM 172
Query: 112 NGTVIGKQSFRADYG 126
G IG R +G
Sbjct: 173 QGFPIGGSRIRLSWG 187
>gi|353238970|emb|CCA70899.1| related to polyadenylate-binding protein [Piriformospora indica DSM
11827]
Length = 944
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 49/83 (59%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANREN 103
G P D NTT+FVGGL P +++E LR F+ +G I VK+P GK CGFVQF + +
Sbjct: 390 GNDPLVPSDPQNTTVFVGGLSPLISEETLRTFFAPFGAIHYVKVPPGKSCGFVQFVKKSD 449
Query: 104 AEEALHKLNGTVIGKQSFRADYG 126
AE A+ L+G I R +G
Sbjct: 450 AERAIEALSGFSIAGSKVRLSWG 472
>gi|449549395|gb|EMD40360.1| hypothetical protein CERSUDRAFT_110955 [Ceriporiopsis subvermispora
B]
Length = 709
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 50/78 (64%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
+ D NTT+FVGGL P ++++ LR F+ +G+I VK+P GK CGFVQF + +AE A+
Sbjct: 382 TSSDPYNTTVFVGGLSPLISEDTLRTFFAPFGDIHYVKVPAGKHCGFVQFVRKPDAERAI 441
Query: 109 HKLNGTVIGKQSFRADYG 126
K+ G IG R +G
Sbjct: 442 EKMQGFPIGGSRIRLSWG 459
>gi|365987806|ref|XP_003670734.1| hypothetical protein NDAI_0F01720 [Naumovozyma dairenensis CBS 421]
gi|343769505|emb|CCD25491.1| hypothetical protein NDAI_0F01720 [Naumovozyma dairenensis CBS 421]
Length = 474
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 76/144 (52%), Gaps = 21/144 (14%)
Query: 35 GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG 94
G SNG QG S +S N+TIFVGGL +V++++L + F +GEI VKIP+GK CG
Sbjct: 289 GNLRSNGNIRQGLGS--NSKNSTIFVGGLSTDVSEQELNELFRPFGEIMDVKIPLGKKCG 346
Query: 95 FVQFANRENAEEALHKLNGTVIGKQSFRADYGNQWSG----------AYYGGQVYDG-YG 143
FV F R +A+ A+ L+G ++ R +G ++ ++ G YD +
Sbjct: 347 FVTFKRRIDAKAAIKGLHGFLVRGCPIRLSWGKTFNNTVDLTSGTTRSFNSG--YDSPFK 404
Query: 144 YAIPPPNDPSMYAAAAAAYGAYPV 167
Y P Y+ +AA+ YP+
Sbjct: 405 YTFPD------YSNCSAAWTNYPI 422
>gi|443926790|gb|ELU45354.1| RNA recognition motif domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 886
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 60/104 (57%), Gaps = 6/104 (5%)
Query: 30 QYSSQGGYASNGAPGQ------GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIA 83
+ +S+GG S GA + G + D NTT+FVGGL + +E LR F+ +GEI
Sbjct: 472 EIASRGGGLSEGARLESARALLGVLNSADPYNTTVFVGGLSGLIAEETLRGFFAPFGEIH 531
Query: 84 SVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYGN 127
VKIP GKGCGFVQF + +AE A+ ++ G IG R +G
Sbjct: 532 YVKIPPGKGCGFVQFVRKADAERAIERMQGYPIGGGKIRLSWGR 575
>gi|444322688|ref|XP_004181985.1| hypothetical protein TBLA_0H01790 [Tetrapisispora blattae CBS 6284]
gi|387515031|emb|CCH62466.1| hypothetical protein TBLA_0H01790 [Tetrapisispora blattae CBS 6284]
Length = 674
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 49/75 (65%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+F+GGL V++ +LR F +G I VKIPVGKGCGFVQ+ +R AE A+ K+
Sbjct: 336 DPNNTTVFIGGLSSLVSEGELRSYFQPFGTIVYVKIPVGKGCGFVQYVDRSAAETAISKM 395
Query: 112 NGTVIGKQSFRADYG 126
G IG R +G
Sbjct: 396 QGFPIGNSRIRLSWG 410
Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEEALH 109
++FVG L PNVT+ L F ++Y KI V KG GFV+F N + + +L+
Sbjct: 174 SVFVGDLAPNVTEAQLFDLFINRYSSTIHAKIVYDQMTNVSKGYGFVRFNNSADQQRSLN 233
Query: 110 KLNGTVIGKQSFRA 123
++ G + +S R
Sbjct: 234 EMQGVFLNGRSIRV 247
>gi|149242856|ref|XP_001526474.1| hypothetical protein LELG_03032 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450597|gb|EDK44853.1| hypothetical protein LELG_03032 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 692
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 47/75 (62%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D+SNTT+FVGGL VT+ L F +G I +KIP GK CGFV++A RE AEE + +
Sbjct: 350 DTSNTTVFVGGLSSEVTEATLFTLFKPFGTILQIKIPPGKNCGFVKYATREEAEETISAM 409
Query: 112 NGTVIGKQSFRADYG 126
G +IG R +G
Sbjct: 410 QGFIIGGNRVRLSWG 424
>gi|50292159|ref|XP_448512.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527824|emb|CAG61473.1| unnamed protein product [Candida glabrata]
Length = 802
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 50/75 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL P V ++ LR+ F +G I S+KIP GK CGFV+F ++ +AE A+ L
Sbjct: 463 DPTNTTVFVGGLGPTVQEQQLRKIFQPFGNILSIKIPPGKNCGFVKFEHKIDAEAAIQGL 522
Query: 112 NGTVIGKQSFRADYG 126
G V+ + R +G
Sbjct: 523 QGFVLVENPIRLSWG 537
Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 7/125 (5%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PV---GKGCGFVQFANRENAEEALH 109
++FVG L P T+ DL F +++ + +V++ P+ + GFV+F N E AL
Sbjct: 235 SLFVGDLSPTATEADLLSLFQTKFKSVKTVRVMTDPITGASRCFGFVRFGNEEERRRALI 294
Query: 110 KLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPVYG 169
++NG ++ R Y S Q + + + + N S + Y +
Sbjct: 295 EMNGVHFQGRTLRVAYATPRSTTVMHTQGNNPHDHHVDVRNTISKAELEKSNLSQYLMNA 354
Query: 170 SHQQQ 174
S+ Q
Sbjct: 355 SNNSQ 359
>gi|385302315|gb|EIF46452.1| mrna binding post-transcriptional regulator [Dekkera bruxellensis
AWRI1499]
Length = 207
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Query: 44 GQGPQSEG-DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRE 102
G P S G D +NTT+FVGG++ +V+++ LR F +G+I +V +P GKGCGFV+F E
Sbjct: 51 GSAPYSGGQDPNNTTVFVGGINSSVSEDALRSLFDPFGDIVNVCVPPGKGCGFVRFTTHE 110
Query: 103 NAEEALHKLNGTVIGKQSFRADYG 126
+A++A++++ G V+G R +G
Sbjct: 111 SAQQAVNEMQGFVLGGSRIRLRWG 134
>gi|393216132|gb|EJD01623.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 937
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D NTT+FVGGL P ++++ LR F+ +G+I VK+P GK CGFVQF + +AE A+ ++
Sbjct: 575 DPYNTTVFVGGLSPLISEDTLRTFFAPFGDIHYVKVPAGKHCGFVQFVRKADAERAIERM 634
Query: 112 NGTVIGKQSFRADYG 126
G IG R +G
Sbjct: 635 QGFPIGGSRIRLSWG 649
>gi|320584167|gb|EFW98378.1| RNA-binding post-transcriptional regulator csx1 [Ogataea
parapolymorpha DL-1]
Length = 485
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 70/128 (54%), Gaps = 11/128 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGA----------PGQGP-QS 49
+ EM G RP+R+ A+ +++ + + +G P P Q
Sbjct: 213 LIEMQGYVLLGRPIRVSTASKSQTNAAANSSFASAMPSQDGLGQLKVNVPSLPQTAPLQY 272
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 109
D +NTT+F+GGL+ +++ LR FS+YG+I+ VKIP GK CGFVQF +R +AE A+
Sbjct: 273 YNDPNNTTVFIGGLNVPISEMQLRALFSRYGDISYVKIPPGKNCGFVQFFHRASAEMAIS 332
Query: 110 KLNGTVIG 117
++ G IG
Sbjct: 333 EMQGYDIG 340
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 39 SNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------K 91
S+GA Q +G S +IFVG L VT++ L Q F ++Y + K+ + K
Sbjct: 138 SSGANATAFQPKGQSE-YSIFVGDLPQTVTEQSLLQAFQARYPSCSGAKVMIDPATGHLK 196
Query: 92 GCGFVQFANRENAEEALHKLNGTVIGKQSFRA 123
G GFV+F N + + AL ++ G V+ + R
Sbjct: 197 GYGFVKFLNETDQKRALIEMQGYVLLGRPIRV 228
>gi|254579785|ref|XP_002495878.1| ZYRO0C05060p [Zygosaccharomyces rouxii]
gi|238938769|emb|CAR26945.1| ZYRO0C05060p [Zygosaccharomyces rouxii]
Length = 716
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+F+GGL P + + L+ FS +G I +VKIP GK CGFV+F R +AE A+ +
Sbjct: 417 DPNNTTVFIGGLTPKINENQLQTLFSPFGNILTVKIPQGKNCGFVKFEKRIDAEAAIQGM 476
Query: 112 NGTVIGKQSFRADYG 126
G V+G R +G
Sbjct: 477 QGFVVGGCPIRLSWG 491
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 8/112 (7%)
Query: 23 KSSGYQQQYSSQGGYASNGAPGQGPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQ-YG 80
+SSG + Q + N A G QS S ++FVG L P T+ DL F Q +
Sbjct: 188 QSSGLATNPTGQRNFRLNWASGATLQSSIPSRPEFSLFVGDLSPTATEADLLSLFQQKFK 247
Query: 81 EIASVKI---PV---GKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ +V++ P+ + GFV+F N E AL ++NG + R Y
Sbjct: 248 SVKTVRVMTDPITGASRCFGFVRFGNEEERRRALVEMNGVWCQGRCLRVAYA 299
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQ 30
+ EMNGV+C R +R+ ATPR + +Q Q
Sbjct: 281 LVEMNGVWCQGRCLRVAYATPRNNMMWQVQ 310
>gi|323304584|gb|EGA58347.1| Nam8p [Saccharomyces cerevisiae FostersB]
Length = 523
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 36/162 (22%)
Query: 1 MTEMNGVYCSSRPMRIGAAT------------PRKSSGYQQQ-----YSSQG-GYASNGA 42
++EM GV+ + R +++G + R SS + + S+G + SNG
Sbjct: 222 LSEMQGVFLNGRAIKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGN 281
Query: 43 PGQGPQSE------------------GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIAS 84
G + D +NTT+F+GGL VT+++LR F +G I
Sbjct: 282 NNMGFKRNHMSQFIYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVY 341
Query: 85 VKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
VKIPVGKGCGFVQ+ +R +AE A+ + G I R +G
Sbjct: 342 VKIPVGKGCGFVQYVDRLSAEAAIAGMQGFPIANSRVRLSWG 383
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEE 106
+N +IFVG L PNVT+ L + F ++Y + KI + KG GFV+F N + +
Sbjct: 161 NNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQL 220
Query: 107 ALHKLNGTVIGKQSFRA 123
AL ++ G + ++ +
Sbjct: 221 ALSEMQGVFLNGRAIKV 237
>gi|151944033|gb|EDN62326.1| RNA-binding protein [Saccharomyces cerevisiae YJM789]
Length = 523
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 36/162 (22%)
Query: 1 MTEMNGVYCSSRPMRIGAAT------------PRKSSGYQQQ-----YSSQG-GYASNGA 42
++EM GV+ + R +++G + R SS + + S+G + SNG
Sbjct: 222 LSEMQGVFLNGRAIKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGN 281
Query: 43 PGQGPQSE------------------GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIAS 84
G + D +NTT+F+GGL VT+++LR F +G I
Sbjct: 282 NNMGFKRNHMSQFIYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVY 341
Query: 85 VKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
VKIPVGKGCGFVQ+ +R +AE A+ + G I R +G
Sbjct: 342 VKIPVGKGCGFVQYVDRLSAEAAIAGMQGFPIANSRVRLSWG 383
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEE 106
+N +IFVG L NVT+ L + F ++Y + KI + KG GFV+F N + +
Sbjct: 161 NNCSIFVGDLAANVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQL 220
Query: 107 ALHKLNGTVIGKQSFRA 123
AL ++ G + ++ +
Sbjct: 221 ALSEMQGVFLNGRAIKV 237
>gi|401625439|gb|EJS43448.1| nam8p [Saccharomyces arboricola H-6]
Length = 527
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 49/75 (65%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+F+GGL VT+++LR F +G I VKIPVGKGCGFVQ+ +R +AE A+ +
Sbjct: 313 DPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQYVDRLSAEAAISGM 372
Query: 112 NGTVIGKQSFRADYG 126
G I R +G
Sbjct: 373 QGFPIANSRVRLSWG 387
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEE 106
+N +IFVG L PNVT+ L + F ++Y + KI + KG GFV+F N +
Sbjct: 165 NNYSIFVGDLAPNVTESQLFELFINRYASASHAKIVHDQVTGMSKGYGFVKFNNADEQHL 224
Query: 107 ALHKLNGTVIGKQSFRA 123
AL ++ G + ++ +
Sbjct: 225 ALSEMQGVFLNGRAIKV 241
>gi|358056882|dbj|GAA97232.1| hypothetical protein E5Q_03908 [Mixia osmundae IAM 14324]
Length = 683
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL +++E LR F +G+I VKIP KGCGFVQF R++AE A+ K+
Sbjct: 381 DPNNTTVFVGGLPACISEETLRNFFQHFGDITYVKIPPNKGCGFVQFVRRQDAELAILKM 440
Query: 112 NGTVI-GKQSFRADYG 126
+ I GK R +G
Sbjct: 441 HDFPIHGKSRIRLSWG 456
>gi|365760349|gb|EHN02076.1| Nam8p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 513
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 49/75 (65%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+F+GGL VT+++LR F +G I VKIPVGKGCGFVQ+ +R +AE A+ +
Sbjct: 301 DPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQYVDRLSAEAAIAGM 360
Query: 112 NGTVIGKQSFRADYG 126
G I R +G
Sbjct: 361 QGFPIANSRVRLSWG 375
Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEEALH 109
+IFVG L PNVT+ L F ++Y + KI + KG GFV+F N + AL
Sbjct: 153 SIFVGDLAPNVTESQLFGLFINRYASASHAKIVHDQVTGMSKGYGFVKFTNAGEEQLALS 212
Query: 110 KLNGTVIGKQSFRA 123
++ G + ++ +
Sbjct: 213 EMQGVFLNGRAIKV 226
>gi|365765198|gb|EHN06710.1| Nam8p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 523
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 36/162 (22%)
Query: 1 MTEMNGVYCSSRPMRIGAAT------------PRKSSGYQQQ-----YSSQG-GYASNGA 42
++EM GV+ + R +++G + R SS + + S+G + SNG
Sbjct: 222 LSEMQGVFLNGRAIKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGN 281
Query: 43 PGQGPQSE------------------GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIAS 84
G + D +NTT+F+GGL VT+++LR F +G I
Sbjct: 282 NTMGFKRNHMSQFIYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVY 341
Query: 85 VKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
VKIPVGKGCGFVQ+ +R +AE A+ + G I R +G
Sbjct: 342 VKIPVGKGCGFVQYVDRLSAEAAIAGMQGFPIANSRVRLSWG 383
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEE 106
+N +IFVG L PNVT+ L + F ++Y + KI + KG GFV+F N + +
Sbjct: 161 NNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQL 220
Query: 107 ALHKLNGTVIGKQSFRA 123
AL ++ G + ++ +
Sbjct: 221 ALSEMQGVFLNGRAIKV 237
>gi|259146840|emb|CAY80096.1| Nam8p [Saccharomyces cerevisiae EC1118]
gi|323348251|gb|EGA82500.1| Nam8p [Saccharomyces cerevisiae Lalvin QA23]
Length = 523
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 36/162 (22%)
Query: 1 MTEMNGVYCSSRPMRIGAAT------------PRKSSGYQQQ-----YSSQG-GYASNGA 42
++EM GV+ + R +++G + R SS + + S+G + SNG
Sbjct: 222 LSEMQGVFLNGRAIKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGN 281
Query: 43 PGQGPQSE------------------GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIAS 84
G + D +NTT+F+GGL VT+++LR F +G I
Sbjct: 282 NTMGFKRNHMSQFIYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVY 341
Query: 85 VKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
VKIPVGKGCGFVQ+ +R +AE A+ + G I R +G
Sbjct: 342 VKIPVGKGCGFVQYVDRLSAEAAIAGMQGFPIANSRVRLSWG 383
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEE 106
+N +IFVG L PNVT+ L + F ++Y + KI + KG GFV+F N + +
Sbjct: 161 NNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQL 220
Query: 107 ALHKLNGTVIGKQSFRA 123
AL ++ G + ++ +
Sbjct: 221 ALSEMQGVFLNGRAIKV 237
>gi|349578638|dbj|GAA23803.1| K7_Nam8p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392298893|gb|EIW09988.1| Nam8p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 523
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 49/75 (65%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+F+GGL VT+++LR F +G I VKIPVGKGCGFVQ+ +R +AE A+ +
Sbjct: 309 DPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQYVDRLSAEAAIAGM 368
Query: 112 NGTVIGKQSFRADYG 126
G I R +G
Sbjct: 369 QGFPIANSRVRLSWG 383
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEE 106
+N +IFVG L PNVT+ L + F ++Y + KI + KG GFV+F N + +
Sbjct: 161 NNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQL 220
Query: 107 ALHKLNGTVIGKQSFRA 123
AL ++ G + ++ +
Sbjct: 221 ALSEMQGVFLNGRAIKV 237
>gi|256269427|gb|EEU04722.1| Nam8p [Saccharomyces cerevisiae JAY291]
Length = 523
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 49/75 (65%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+F+GGL VT+++LR F +G I VKIPVGKGCGFVQ+ +R +AE A+ +
Sbjct: 309 DPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQYVDRLSAEAAIAGM 368
Query: 112 NGTVIGKQSFRADYG 126
G I R +G
Sbjct: 369 QGFPIANSRVRLSWG 383
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEE 106
+N +IFVG L PNVT+ L + F ++Y + KI + KG GFV+F N + +
Sbjct: 161 NNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQL 220
Query: 107 ALHKLNGTVIGKQSFRA 123
AL ++ G + ++ +
Sbjct: 221 ALSEMQGVFLNGRAIKV 237
>gi|323308830|gb|EGA62067.1| Nam8p [Saccharomyces cerevisiae FostersO]
Length = 466
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 49/75 (65%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+F+GGL VT+++LR F +G I VKIPVGKGCGFVQ+ +R +AE A+ +
Sbjct: 252 DPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQYVDRLSAEAAIAGM 311
Query: 112 NGTVIGKQSFRADYG 126
G I R +G
Sbjct: 312 QGFPIANSRVRLSWG 326
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEE 106
+N +IFVG L PNVT+ L + F ++Y + KI + KG GFV+F N + +
Sbjct: 104 NNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQL 163
Query: 107 ALHKLNGTVIGKQSFRA 123
AL ++ G + ++ +
Sbjct: 164 ALSEMQGVFLNGRAIKV 180
>gi|363750388|ref|XP_003645411.1| hypothetical protein Ecym_3082 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889045|gb|AET38594.1| Hypothetical protein Ecym_3082 [Eremothecium cymbalariae
DBVPG#7215]
Length = 586
Score = 75.9 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 34/75 (45%), Positives = 51/75 (68%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D SNTT+F+GGL+ +T+ L+ F +G I SVK+P GKGCGFV+F +R +AE A+ +
Sbjct: 394 DPSNTTVFIGGLNNQITESQLQSLFMPFGNILSVKVPPGKGCGFVKFEHRLDAEAAIQGM 453
Query: 112 NGTVIGKQSFRADYG 126
G ++G + R +G
Sbjct: 454 QGFIVGNSAIRLSWG 468
Score = 35.4 bits (80), Expect = 8.8, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQG 35
+ EMNG++C R +R+ ATPR + QQQ G
Sbjct: 222 LVEMNGIWCQGRQLRVAYATPRNNILQQQQIPVPG 256
>gi|391330636|ref|XP_003739762.1| PREDICTED: nucleolysin TIAR-like [Metaseiulus occidentalis]
Length = 364
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 72/148 (48%), Gaps = 30/148 (20%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+T MN C R +R+ A SS QQQ P S + IFV
Sbjct: 68 ITAMNARMCLGRELRVNWA----SSAIQQQ---------------TPHRPDTSKHHHIFV 108
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEALHKLNGT 114
G L P + DLR+ FS +GEI+ ++ KG GFV F N+++AE A+H ++G+
Sbjct: 109 GDLSPQIETSDLREAFSPFGEISDCRVVKDATTQKSKGYGFVSFTNKQDAENAIHTMDGS 168
Query: 115 VIGKQSFRADYG-----NQWSGAYYGGQ 137
+G ++ R ++ ++ +G+Y GG
Sbjct: 169 WLGSRAIRTNWASRKPNHKETGSYIGGH 196
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 54 SNTTIFVGGLDPNVTDED-LRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
SN T++ GGL+ + ED LRQ F ++GEI +++ KG F++F ++E+A A+ +
Sbjct: 212 SNCTVYCGGLNQMASSEDFLRQAFDEFGEIVDIRLFKDKGYAFIKFNSKESACRAIVARH 271
Query: 113 GTVIGKQSFRADYGNQ 128
+ IG Q+ + +G +
Sbjct: 272 NSDIGGQAVKCSWGKE 287
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEALHKLNG 113
T++VG LD VT++ + FSQ G+I KI P FV+F N +A A+ +N
Sbjct: 14 TLYVGNLDSGVTEDLVCALFSQMGQIKGCKIIHEPGSDPYCFVEFVNHSDASSAITAMNA 73
Query: 114 TVIGKQSFRADYGN 127
+ + R ++ +
Sbjct: 74 RMCLGRELRVNWAS 87
>gi|406603569|emb|CCH44882.1| Negative growth regulatory protein NGR1 [Wickerhamomyces ciferrii]
Length = 641
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 45 QGPQSE--GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRE 102
Q PQS D +NTT+F+GGL P + ++ L F +G I VKIP GKGCGF++F RE
Sbjct: 374 QTPQSVPYTDPTNTTVFIGGLAPGIPEQTLAALFQPFGNITHVKIPPGKGCGFIRFDKRE 433
Query: 103 NAEEALHKLNGTVIGKQSFRADYG 126
+AE A+ + G IG R +G
Sbjct: 434 DAEAAIAGMQGFQIGGSRVRLSWG 457
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSS 33
+TEM GV+C+ RP+R+ ATPR S Q +S
Sbjct: 235 LTEMQGVWCAGRPLRVALATPRNQSNQTNQTNS 267
>gi|367016893|ref|XP_003682945.1| hypothetical protein TDEL_0G03670 [Torulaspora delbrueckii]
gi|359750608|emb|CCE93734.1| hypothetical protein TDEL_0G03670 [Torulaspora delbrueckii]
Length = 617
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 48/73 (65%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 113
+NTT+F+GGL P + + L+ FS +G I +VKIP GK CGFV++ NR +AE A+ + G
Sbjct: 384 NNTTVFIGGLTPKINEAQLQALFSPFGNILTVKIPQGKNCGFVKYENRIDAEAAIQGMQG 443
Query: 114 TVIGKQSFRADYG 126
++G R +G
Sbjct: 444 FIVGGNPVRLSWG 456
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 8/112 (7%)
Query: 23 KSSGYQQQYSSQGGYASNGAPGQGPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQ-YG 80
+S+ S Q + N A G QS S ++FVG L P T+ DL F Q +
Sbjct: 169 RSTNLPTNPSGQRNFRLNWASGATLQSSIPSRPEFSLFVGDLSPTATEADLLSLFQQKFR 228
Query: 81 EIASVKI---PV---GKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ +V++ P+ + GFV+F N E AL ++NG + R Y
Sbjct: 229 SVKTVRVMTDPITGASRCFGFVRFGNEEERRRALVEMNGVWCQGRCLRVAYA 280
>gi|323356144|gb|EGA87949.1| Ngr1p [Saccharomyces cerevisiae VL3]
Length = 562
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 47/75 (62%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL P T+ LR F +G I +V+IP GK CGFV+F R +AE ++ L
Sbjct: 248 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 307
Query: 112 NGTVIGKQSFRADYG 126
G ++G R +G
Sbjct: 308 QGFIVGGSPIRLSWG 322
>gi|349576587|dbj|GAA21758.1| K7_Ngr1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 671
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 47/75 (62%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL P T+ LR F +G I +V+IP GK CGFV+F R +AE ++ L
Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 415
Query: 112 NGTVIGKQSFRADYG 126
G ++G R +G
Sbjct: 416 QGFIVGGSPIRLSWG 430
>gi|256270156|gb|EEU05383.1| Ngr1p [Saccharomyces cerevisiae JAY291]
Length = 673
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 47/75 (62%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL P T+ LR F +G I +V+IP GK CGFV+F R +AE ++ L
Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 415
Query: 112 NGTVIGKQSFRADYG 126
G ++G R +G
Sbjct: 416 QGFIVGGSPIRLSWG 430
>gi|4031|emb|CAA78478.1| Negative growth regulatory protein [Saccharomyces cerevisiae]
Length = 672
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 47/75 (62%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL P T+ LR F +G I +V+IP GK CGFV+F R +AE ++ L
Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 415
Query: 112 NGTVIGKQSFRADYG 126
G ++G R +G
Sbjct: 416 QGFIVGGSPIRLSWG 430
>gi|398365523|ref|NP_009771.3| Ngr1p [Saccharomyces cerevisiae S288c]
gi|585555|sp|P32831.2|NGR1_YEAST RecName: Full=Negative growth regulatory protein NGR1; AltName:
Full=RNA-binding protein RBP1
gi|536596|emb|CAA85176.1| NGR1 [Saccharomyces cerevisiae]
gi|285810543|tpg|DAA07328.1| TPA: Ngr1p [Saccharomyces cerevisiae S288c]
Length = 672
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 47/75 (62%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL P T+ LR F +G I +V+IP GK CGFV+F R +AE ++ L
Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 415
Query: 112 NGTVIGKQSFRADYG 126
G ++G R +G
Sbjct: 416 QGFIVGGSPIRLSWG 430
>gi|365766915|gb|EHN08404.1| Ngr1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 669
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 47/75 (62%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL P T+ LR F +G I +V+IP GK CGFV+F R +AE ++ L
Sbjct: 355 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 414
Query: 112 NGTVIGKQSFRADYG 126
G ++G R +G
Sbjct: 415 QGFIVGGSPIRLSWG 429
>gi|190408636|gb|EDV11901.1| glucose-repressible RNA binding protein [Saccharomyces cerevisiae
RM11-1a]
gi|290878229|emb|CBK39288.1| Ngr1p [Saccharomyces cerevisiae EC1118]
Length = 670
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 47/75 (62%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL P T+ LR F +G I +V+IP GK CGFV+F R +AE ++ L
Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 415
Query: 112 NGTVIGKQSFRADYG 126
G ++G R +G
Sbjct: 416 QGFIVGGSPIRLSWG 430
>gi|392301060|gb|EIW12149.1| Ngr1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 670
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 47/75 (62%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL P T+ LR F +G I +V+IP GK CGFV+F R +AE ++ L
Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 415
Query: 112 NGTVIGKQSFRADYG 126
G ++G R +G
Sbjct: 416 QGFIVGGSPIRLSWG 430
>gi|331220231|ref|XP_003322791.1| hypothetical protein PGTG_04328 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309301781|gb|EFP78372.1| hypothetical protein PGTG_04328 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 897
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D SNTT+FVGGL +++ L+ F +GEI VKIP KGCGFVQ+ RE+A++A+ K+
Sbjct: 637 DPSNTTVFVGGLPACISEGTLKTFFQNFGEITYVKIPPNKGCGFVQYVRREDAQQAMLKM 696
Query: 112 NGTVI-GKQSFRADYG 126
+ I GK R +G
Sbjct: 697 HDFPIHGKSRIRLSWG 712
>gi|207347548|gb|EDZ73682.1| YBR212Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 617
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 47/75 (62%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL P T+ LR F +G I +V+IP GK CGFV+F R +AE ++ L
Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 415
Query: 112 NGTVIGKQSFRADYG 126
G ++G R +G
Sbjct: 416 QGFIVGGSPIRLSWG 430
>gi|388580130|gb|EIM20447.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 681
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 49/79 (62%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D NTT+FVGGL ++++ LR F+ +G I VKIP GKGCGFVQF + +AE A+ ++
Sbjct: 308 DPHNTTVFVGGLSSLISEDTLRVFFAPFGAITYVKIPPGKGCGFVQFVRKADAERAIERM 367
Query: 112 NGTVIGKQSFRADYGNQWS 130
G IG R +G S
Sbjct: 368 QGFPIGGGRIRLSWGRSQS 386
>gi|323337302|gb|EGA78555.1| Nam8p [Saccharomyces cerevisiae Vin13]
Length = 523
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 76/162 (46%), Gaps = 36/162 (22%)
Query: 1 MTEMNGVYCSSRPMRIGAAT------------PRKSSGYQQQ-----YSSQG-GYASNGA 42
++EM GV+ + R +++G + R SS + + S+G + SNG
Sbjct: 222 LSEMQGVFLNGRAIKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGN 281
Query: 43 PGQGPQSE------------------GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIAS 84
G + D +NTT+F+GGL VT+++LR F +G I
Sbjct: 282 NXMGFKRNHMSQFIYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVY 341
Query: 85 VKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
VKIPVGK CGFVQ+ +R +AE A+ + G I R +G
Sbjct: 342 VKIPVGKXCGFVQYVDRLSAEAAIAGMQGFPIANSRVRLSWG 383
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEE 106
+N +IFVG L PNVT+ L + F ++Y + KI + KG GFV+F N + +
Sbjct: 161 NNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQL 220
Query: 107 ALHKLNGTVIGKQSFRA 123
AL ++ G + ++ +
Sbjct: 221 ALSEMQGVFLNGRAIKV 237
>gi|4026|emb|CAA46011.1| NAM8 [Saccharomyces cerevisiae]
gi|228931|prf||1814447B NAM8 gene
Length = 523
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 76/162 (46%), Gaps = 36/162 (22%)
Query: 1 MTEMNGVYCSSRPMRIGAAT------------PRKSSGYQQQ-----YSSQG-GYASNGA 42
++EM GV+ + R +++G + R SS + + S+G + SNG
Sbjct: 222 LSEMQGVFLNGRAIKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGN 281
Query: 43 PGQGPQSE------------------GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIAS 84
G + D +NTT+F+GGL VT+++LR F +G I
Sbjct: 282 NNMGFKRNHMSQFIYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVY 341
Query: 85 VKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
VKIPVGK CGFVQ+ +R +AE A+ + G I R +G
Sbjct: 342 VKIPVGKCCGFVQYVDRLSAEAAIAGMQGFPIANSRVRLSWG 383
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEE 106
+N +IFVG L PNVT+ L + F ++Y + KI + KG V+F N + +
Sbjct: 161 NNCSIFVGDLAPNVTESQLLELFINRYASTSHAKIVHDQVTGMSKGYVLVKFTNSDEQQL 220
Query: 107 ALHKLNGTVIGKQSFRA 123
AL ++ G + ++ +
Sbjct: 221 ALSEMQGVFLNGRAIKV 237
>gi|6321878|ref|NP_011954.1| Nam8p [Saccharomyces cerevisiae S288c]
gi|730108|sp|Q00539.2|NAM8_YEAST RecName: Full=Protein NAM8
gi|487934|gb|AAB68928.1| Nam8p: Putative RNA binding proteins [Saccharomyces cerevisiae]
gi|520596|dbj|BAA02016.1| Mre2 protein [Saccharomyces cerevisiae]
gi|190405867|gb|EDV09134.1| RNA-binding protein [Saccharomyces cerevisiae RM11-1a]
gi|207344656|gb|EDZ71726.1| YHR086Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|285809994|tpg|DAA06781.1| TPA: Nam8p [Saccharomyces cerevisiae S288c]
gi|323333247|gb|EGA74645.1| Nam8p [Saccharomyces cerevisiae AWRI796]
Length = 523
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 76/162 (46%), Gaps = 36/162 (22%)
Query: 1 MTEMNGVYCSSRPMRIGAAT------------PRKSSGYQQQ-----YSSQG-GYASNGA 42
++EM GV+ + R +++G + R SS + + S+G + SNG
Sbjct: 222 LSEMQGVFLNGRAIKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGN 281
Query: 43 PGQGPQSE------------------GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIAS 84
G + D +NTT+F+GGL VT+++LR F +G I
Sbjct: 282 NNMGFKRNHMSQFIYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVY 341
Query: 85 VKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
VKIPVGK CGFVQ+ +R +AE A+ + G I R +G
Sbjct: 342 VKIPVGKCCGFVQYVDRLSAEAAIAGMQGFPIANSRVRLSWG 383
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEE 106
+N +IFVG L PNVT+ L + F ++Y + KI + KG GFV+F N + +
Sbjct: 161 NNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQL 220
Query: 107 ALHKLNGTVIGKQSFRA 123
AL ++ G + ++ +
Sbjct: 221 ALSEMQGVFLNGRAIKV 237
>gi|331220241|ref|XP_003322796.1| hypothetical protein PGTG_04333 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309301786|gb|EFP78377.1| hypothetical protein PGTG_04333 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 666
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 73/134 (54%), Gaps = 16/134 (11%)
Query: 5 NGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY---ASNGAP-GQGPQSE-------GDS 53
NG++ P IGAA+ + Y YSS GY AP PQ+ D
Sbjct: 92 NGIF----PSPIGAASLNSTQAYYPAYSSYNGYPLAIPIAAPLATMPQTSFQENSPNDDP 147
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 113
S+TT+FV GL +T++ L+ F +GEIA VKIP KG GFV++ RE+A++A+ K+N
Sbjct: 148 SSTTVFVAGLPACITEDTLKTFFQNFGEIAYVKIPPHKGYGFVKYVRREDAKQAIIKMND 207
Query: 114 TVIGKQS-FRADYG 126
I ++S R +G
Sbjct: 208 FPIHEKSRIRLSWG 221
>gi|449530398|ref|XP_004172182.1| PREDICTED: uncharacterized protein LOC101232188 [Cucumis sativus]
Length = 167
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 39/44 (88%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANR 101
IFVGGLD +V+DEDL+Q FS+ G++ SVKIP+GKGCGF+QF NR
Sbjct: 123 IFVGGLDYDVSDEDLKQAFSKLGDVVSVKIPIGKGCGFLQFTNR 166
>gi|328858949|gb|EGG08060.1| hypothetical protein MELLADRAFT_31227 [Melampsora larici-populina
98AG31]
Length = 76
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D SNTT+FVGGL +++E L+ F +GEI VKIP KGCGFVQ+ R +AE A+ K+
Sbjct: 1 DPSNTTVFVGGLPACISEETLKTFFQNFGEITYVKIPPNKGCGFVQYVRRADAEAAMLKM 60
Query: 112 NGTVI-GKQSFRADYG 126
+ I GK R +G
Sbjct: 61 HDFPIHGKSRIRLSWG 76
>gi|384495849|gb|EIE86340.1| hypothetical protein RO3G_11051 [Rhizopus delemar RA 99-880]
Length = 1099
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 61/126 (48%), Gaps = 18/126 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ EM G Y S +R+ A P+ GP G TT+FV
Sbjct: 154 LEEMQGAYVGSSRIRVSVARPKAKIE------------------TGPVVSGPEEITTVFV 195
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGL+ +T+E+LR F +G I +VKI K F+Q+ + +AE+A+ +LNG+ +G
Sbjct: 196 GGLNNTITEEELRAYFGTFGNIVAVKIIPLKNIAFIQYEKKSSAEQAISELNGSHLGGAK 255
Query: 121 FRADYG 126
R +G
Sbjct: 256 LRLSFG 261
Score = 38.1 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 12/115 (10%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPG-QGPQSEGDS-SNTTIFVGGLDPNVTDEDLRQ 74
G P + ++ +S++ SNG P Q P + + IFVG L +V D L
Sbjct: 57 GTQIPNTNKVFKLNWSNRD---SNGMPLLQRPTLMSNFLGDYCIFVGDLRADVDDNILLT 113
Query: 75 PF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
F S+Y AS K+ V KG GFV+F + + +L ++ G +G R
Sbjct: 114 TFQSRYKSAASAKVMVDPATGFSKGFGFVKFFDEIEQKRSLEEMQGAYVGSSRIR 168
>gi|151946599|gb|EDN64821.1| glucose-repressible RNA binding protein [Saccharomyces cerevisiae
YJM789]
Length = 670
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 46/75 (61%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL P T+ LR F +G I +V IP GK CGFV+F R +AE ++ L
Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVTIPNGKNCGFVKFEKRIDAEASIQGL 415
Query: 112 NGTVIGKQSFRADYG 126
G ++G R +G
Sbjct: 416 QGFIVGGSPIRLSWG 430
>gi|323338729|gb|EGA79945.1| Ngr1p [Saccharomyces cerevisiae Vin13]
Length = 594
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/75 (45%), Positives = 47/75 (62%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL P T+ LR F +G I +V+IP GK CGFV+F R +AE ++ L
Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 415
Query: 112 NGTVIGKQSFRADYG 126
G ++G R +G
Sbjct: 416 QGFIVGGSPIRLSWG 430
>gi|344232977|gb|EGV64850.1| RNA-binding domain-containing protein [Candida tenuis ATCC 10573]
Length = 617
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
Q D +NTT+FVGGL V+++ L F +G + +KIP GK CGFV+++ RE AE+A
Sbjct: 386 QPYNDPTNTTVFVGGLSSEVSEQTLFALFQPFGVVQQIKIPPGKNCGFVKYSTREEAEDA 445
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ + G +IG R +G
Sbjct: 446 IASMQGYIIGGNRVRLSWG 464
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 18/116 (15%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQY--GEIASVKI---PVG---KGCGFVQFANRENAEEAL 108
++FVG L + T+ L F + + +V++ PV + GFV+F + + AL
Sbjct: 200 SLFVGDLSASTTEAHLLAFFQKSFPRSVKTVRVMTDPVNGKSRCFGFVRFTDESERQRAL 259
Query: 109 HKLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGA 164
H++NG G + R Y + +D PPP + MY YG
Sbjct: 260 HEMNGVWFGGRPLRVALAT----PRYNKKSFDK-----PPPQE-MMYMTPFGFYGT 305
>gi|323349799|gb|EGA84014.1| Ngr1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 593
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/75 (45%), Positives = 47/75 (62%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL P T+ LR F +G I +V+IP GK CGFV+F R +AE ++ L
Sbjct: 355 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 414
Query: 112 NGTVIGKQSFRADYG 126
G ++G R +G
Sbjct: 415 QGFIVGGSPIRLSWG 429
>gi|255732850|ref|XP_002551348.1| predicted protein [Candida tropicalis MYA-3404]
gi|240131089|gb|EER30650.1| predicted protein [Candida tropicalis MYA-3404]
Length = 810
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 46/75 (61%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL V + L F +G I VKIP GK CGFV+++ R+ AEEA+ +
Sbjct: 445 DPNNTTVFVGGLSSEVNEPTLYTLFKPFGMIQQVKIPPGKNCGFVKYSTRDEAEEAIAAM 504
Query: 112 NGTVIGKQSFRADYG 126
G +IG R +G
Sbjct: 505 QGFIIGGNRVRLSWG 519
>gi|448111139|ref|XP_004201770.1| Piso0_001971 [Millerozyma farinosa CBS 7064]
gi|359464759|emb|CCE88464.1| Piso0_001971 [Millerozyma farinosa CBS 7064]
Length = 655
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 47/79 (59%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
Q D NTT+FVGGL V D+ L F +G I VKIP GK CGF++++ R+ AE+A
Sbjct: 416 QPFADPKNTTVFVGGLSSEVNDQTLFALFKPFGIIQQVKIPPGKNCGFIKYSKRQEAEDA 475
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ + G +IG R +G
Sbjct: 476 IASMQGFIIGGNRVRLSWG 494
>gi|448097114|ref|XP_004198591.1| Piso0_001971 [Millerozyma farinosa CBS 7064]
gi|359380013|emb|CCE82254.1| Piso0_001971 [Millerozyma farinosa CBS 7064]
Length = 655
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 47/79 (59%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
Q D NTT+FVGGL V D+ L F +G I VKIP GK CGF++++ R+ AE+A
Sbjct: 416 QPFADPKNTTVFVGGLSAEVNDQTLFALFKPFGIIQQVKIPPGKNCGFIKYSKRQEAEDA 475
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ + G +IG R +G
Sbjct: 476 IASMQGFIIGGNRVRLSWG 494
>gi|365761964|gb|EHN03583.1| Ngr1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 666
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 46/75 (61%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL P + LR F +G I +V+IP GK CGFV+F R +AE ++ L
Sbjct: 355 DPTNTTVFVGGLVPKTAEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 414
Query: 112 NGTVIGKQSFRADYG 126
G ++G R +G
Sbjct: 415 QGFIVGGSPIRLSWG 429
>gi|354545611|emb|CCE42339.1| hypothetical protein CPAR2_808880 [Candida parapsilosis]
Length = 739
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 45/75 (60%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL VT+ L F +G I +KIP GK CGFV+++ RE AE + +
Sbjct: 472 DPNNTTVFVGGLSSEVTEATLFTLFKPFGVIQQIKIPPGKNCGFVKYSTREEAERTIAAM 531
Query: 112 NGTVIGKQSFRADYG 126
G +IG R +G
Sbjct: 532 QGFIIGGNRVRLSWG 546
>gi|410081644|ref|XP_003958401.1| hypothetical protein KAFR_0G02320 [Kazachstania africana CBS 2517]
gi|372464989|emb|CCF59266.1| hypothetical protein KAFR_0G02320 [Kazachstania africana CBS 2517]
Length = 620
Score = 72.8 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 29/153 (18%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-------------------------- 34
+ +MNG R +R+ A PR ++ Q+Q SQ
Sbjct: 240 LDKMNGTLLHGRQLRVALANPRNAN-LQEQAPSQVVEDKKKHNEPLLLETAKKLFSKELL 298
Query: 35 --GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG 92
N S+ D +NTT+FVG L+ +T+++L++ F +G I VKIP GK
Sbjct: 299 KNSSSNVNDVKSNEDHSDNDPTNTTVFVGNLNCKITEDELQKVFEPFGAIEKVKIPPGKK 358
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSFRADY 125
CGFV+F N+ +AE +++ L G + R +
Sbjct: 359 CGFVKFCNKIDAEASMYGLQGYFVAGSPIRISW 391
Score = 40.0 bits (92), Expect = 0.40, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 8/112 (7%)
Query: 24 SSGYQQQYSSQGGYASNGAPGQGPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQ-YGE 81
S+ + S Q + N A G QS ++ ++FVG L P T+ DL + F + +
Sbjct: 148 STELETNPSGQRTFRLNWASGATLQSSIPTTPEYSLFVGDLSPMTTEADLLKLFQKTFKS 207
Query: 82 IASVKI---PV---GKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYGN 127
+ +V++ P+ + GF++ ++ EEAL K+NGT++ + R N
Sbjct: 208 VKTVRVMTDPITGESRCFGFIRLSDEFEREEALDKMNGTLLHGRQLRVALAN 259
>gi|448520574|ref|XP_003868310.1| Ngr1 protein [Candida orthopsilosis Co 90-125]
gi|380352650|emb|CCG25406.1| Ngr1 protein [Candida orthopsilosis]
Length = 696
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 45/75 (60%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL VT+ L F +G I +KIP GK CGFV+++ RE AE + +
Sbjct: 422 DPNNTTVFVGGLSSEVTEATLFTLFKPFGVIQQIKIPPGKNCGFVKYSTREEAERTIGAM 481
Query: 112 NGTVIGKQSFRADYG 126
G +IG R +G
Sbjct: 482 QGFIIGGNRVRLSWG 496
>gi|324507975|gb|ADY43373.1| Nucleolysin TIAR [Ascaris suum]
Length = 290
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 20/171 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT RK +G Q S + GP NT++++
Sbjct: 89 IEQMNGQWLGRRTIRTNWAT-RKPTGTDGQQSKPELSYDDVFNQTGP------DNTSVYI 141
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G ++ +V DEDLR F ++G I V+I +G FV+F +++A A+ K+NGT IG Q+
Sbjct: 142 GNVNQSVNDEDLRAAFDKFGRIVEVRIFKTQGFAFVRFDKKDSACNAIVKMNGTEIGGQT 201
Query: 121 FRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPVYGSH 171
+ +G G + Q N + Y AYGAY YG++
Sbjct: 202 VKCSWGRTPEG--HNNQ-----------QNAAANYNQMQGAYGAYGPYGAY 239
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 55/96 (57%), Gaps = 7/96 (7%)
Query: 40 NGAPGQGPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKG 92
N A G Q++ D+S + +F+G L P V ++ L+ F+ +GE++ K+ KG
Sbjct: 14 NWATEPGSQAKVDTSKHFHVFIGDLSPEVDNKALKDAFAPFGEVSDAKVIRDSTTLKSKG 73
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV + RE AE A+ ++NG +G+++ R ++ +
Sbjct: 74 YGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATR 109
>gi|255719794|ref|XP_002556177.1| KLTH0H06842p [Lachancea thermotolerans]
gi|238942143|emb|CAR30315.1| KLTH0H06842p [Lachancea thermotolerans CBS 6340]
Length = 547
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 113
+NTT+F+GGL + ++ L F+ +G I +VKIP GKGCGFV++A R +AE A+ + G
Sbjct: 404 NNTTVFIGGLTSHTSERQLHSLFAPFGTIINVKIPPGKGCGFVKYAYRIDAEAAIQGMQG 463
Query: 114 TVIGKQSFRADYG 126
++G R +G
Sbjct: 464 FIVGGNPIRLSWG 476
>gi|328769593|gb|EGF79636.1| hypothetical protein BATDEDRAFT_19718 [Batrachochytrium
dendrobatidis JAM81]
Length = 431
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 20/129 (15%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGL 63
+ G R +R+ +TP+ +Q + AP P TT+F+G L
Sbjct: 243 LTGTELDGREIRVDVSTPKPPRDGNRQGRKE-------APQSAP-------TTTLFLGNL 288
Query: 64 DPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEALHKLNGTVIG 117
NVT++++R+ FSQYG++ SV+ P KG G+V++ + E A++A+ LNG I
Sbjct: 289 SFNVTEDEIRESFSQYGQLVSVRFPTDRDTGAFKGFGYVEYGDVETAQKAVEGLNGVEIA 348
Query: 118 KQSFRADYG 126
+S R DY
Sbjct: 349 GRSLRLDYA 357
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFV 96
P + P++E + N+T+FVG L NV +E L F+ G + S +I KG G+V
Sbjct: 171 PTKKPKTE-EPVNSTVFVGNLSWNVDEEMLAATFADCGTVESARIITDKETGRAKGFGYV 229
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADY 125
F + +A A L GT + + R D
Sbjct: 230 TFES-ADALTAAMALTGTELDGREIRVDV 257
>gi|308198150|ref|XP_001387102.2| negative growth regulatory protein [Scheffersomyces stipitis CBS
6054]
gi|149389050|gb|EAZ63079.2| negative growth regulatory protein [Scheffersomyces stipitis CBS
6054]
Length = 690
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 52/85 (61%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANR 101
+PG PQ D +NTT+FVGGL VT+ L F +G I VKIP GK CGF++++ R
Sbjct: 388 SPGVQPQPYTDPNNTTVFVGGLSSEVTESTLFTLFKPFGIIQQVKIPPGKNCGFIKYSTR 447
Query: 102 ENAEEALHKLNGTVIGKQSFRADYG 126
E AEEA+ + G +IG R +G
Sbjct: 448 EEAEEAIAAMQGFIIGGNRVRLSWG 472
>gi|367002926|ref|XP_003686197.1| hypothetical protein TPHA_0F02820 [Tetrapisispora phaffii CBS 4417]
gi|357524497|emb|CCE63763.1| hypothetical protein TPHA_0F02820 [Tetrapisispora phaffii CBS 4417]
Length = 608
Score = 69.3 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 45/177 (25%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK---------------------------SSGYQQQYSS 33
+ MNGV C SR R+ ATPR +S Y+Q ++
Sbjct: 242 LENMNGVMCHSRYFRLALATPRTNKFATSTNMTQVREDNDGRSNSVTNVHTSPYEQTTTN 301
Query: 34 QGGY--------------ASNGAPGQGPQS----EGDSSNTTIFVGGLDPNVTDEDLRQP 75
SN + Q Q+ D+SNTT+F+GGL + + +L+
Sbjct: 302 INISNKFIDKLDVNNFIPTSNNSLQQSAQNIDHVNLDNSNTTVFIGGLSTSTNEYELQVL 361
Query: 76 FSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQWSGA 132
F +G I SVKIP+GK CGFV+F + A A+ + G +I R +G + A
Sbjct: 362 FEPFGNILSVKIPIGKNCGFVKFKRKIEANAAIKGMQGFIINGNPIRLSWGKSNNNA 418
Score = 38.5 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 42/73 (57%), Gaps = 7/73 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKI---PV---GKGCGFVQFANRENAEEALH 109
++F+G L P T+ D+ F + Y + +V++ P+ +G GF++F++ + ++AL
Sbjct: 184 SLFIGDLSPLTTEADILSIFQKKYKSVKTVRVMTDPINGSSRGFGFIRFSDEDERKDALE 243
Query: 110 KLNGTVIGKQSFR 122
+NG + + FR
Sbjct: 244 NMNGVMCHSRYFR 256
>gi|110681486|emb|CAL25353.1| ACBF-like dna binding protein [Platanus x acerifolia]
Length = 216
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/36 (83%), Positives = 34/36 (94%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG 36
++EMNG YCS+RPMR+G ATPRKSSGYQQQYSSQGG
Sbjct: 181 ISEMNGAYCSNRPMRVGVATPRKSSGYQQQYSSQGG 216
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEAL 108
N TI+VG L + L F+ GE+ S+K+ K G GFV+F +RE AE+ L
Sbjct: 28 NKTIWVGDLHYWMDGNYLNNCFAHTGEVISIKVIRNKQTGQSEGYGFVEFFSREAAEKVL 87
Query: 109 HKLNGTVI--GKQSFRADY 125
NGT + +Q FR ++
Sbjct: 88 QNYNGTAMPNTEQPFRLNW 106
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEE 106
S+ +IFVG L +VTD L++ F S+Y + K+ + KG GFV+F +
Sbjct: 120 SDHSIFVGDLSSDVTDTLLQETFASRYPSVKGAKVVIDANTGRSKGYGFVRFGDDNERSR 179
Query: 107 ALHKLNGTVIGKQSFRA 123
A+ ++NG + R
Sbjct: 180 AISEMNGAYCSNRPMRV 196
>gi|42571787|ref|NP_973984.1| RNA-binding protein 47C [Arabidopsis thaliana]
gi|332194052|gb|AEE32173.1| RNA-binding protein 47C [Arabidopsis thaliana]
Length = 310
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 41/60 (68%), Gaps = 7/60 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGV CSSR MRIG ATPRK++GYQQ QGGY NG + EGD NTT+ V
Sbjct: 256 MTEMNGVKCSSRAMRIGPATPRKTNGYQQ----QGGYMPNGTLT---RPEGDIMNTTVIV 308
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQFANRE 102
E + + +IFVG L P+V+D L + FS+ Y + + K+ + KG GFV+F +
Sbjct: 191 ENNGPDLSIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDEN 250
Query: 103 NAEEALHKLNGTVIGKQSFR 122
+A+ ++NG ++ R
Sbjct: 251 ERTKAMTEMNGVKCSSRAMR 270
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 10/93 (10%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS--QYGEIASVKIPVGK------GCGF 95
G Q+ + N TI+VG L + + L F+ EI SVK+ K G GF
Sbjct: 89 GNKHQNAFNGENKTIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGF 148
Query: 96 VQFANRENAEEALHKLNGTVI--GKQSFRADYG 126
V+F + + A++ L + NGT + Q FR ++
Sbjct: 149 VEFESHDVADKVLREFNGTTMPNTDQPFRLNWA 181
>gi|50304975|ref|XP_452445.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641578|emb|CAH01296.1| KLLA0C05522p [Kluyveromyces lactis]
Length = 540
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/73 (45%), Positives = 46/73 (63%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 113
S+TT+FVGGL+PN+ + L + F +G I VKIP GK CGFV++ R AE A++ L G
Sbjct: 443 SSTTVFVGGLNPNINELQLFELFKPFGTITDVKIPPGKQCGFVKYNERLEAEAAINGLQG 502
Query: 114 TVIGKQSFRADYG 126
+I R +G
Sbjct: 503 FIIMGSPIRLSWG 515
Score = 37.7 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PV---GKGCGFVQFANRENAEEALH 109
++FVG L P T+ DL F ++Y + +V++ P+ + GFV+FAN AL
Sbjct: 160 SLFVGDLSPFATEADLLSLFQTKYNSVKTVRVMTDPITGASRCFGFVRFANETERRNALI 219
Query: 110 KLNGTVIGKQSFRADYG 126
++NG + R Y
Sbjct: 220 EMNGVQFQGRQLRVAYA 236
>gi|356553476|ref|XP_003545082.1| PREDICTED: zinc finger CCCH domain-containing protein 40-like
[Glycine max]
Length = 482
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D S T++VGGLD VT++DLR F +GEI S+K+ + + C FV + RE AE+A +L
Sbjct: 224 DESIKTLYVGGLDARVTEQDLRDHFYAHGEIESIKMVLQRACAFVTYTTREGAEKAAEEL 283
Query: 112 NGTVIGK 118
+ ++ K
Sbjct: 284 SNKLVIK 290
>gi|356499475|ref|XP_003518565.1| PREDICTED: zinc finger CCCH domain-containing protein 40-like
[Glycine max]
Length = 484
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D S T++VGGLD VT++DLR F +GEI S+K+ + + C FV + RE AE+A +L
Sbjct: 224 DESIKTLYVGGLDARVTEQDLRDHFYAHGEIESIKMVLQRACAFVTYTTREGAEKAAEEL 283
Query: 112 NGTVIGK 118
+ ++ K
Sbjct: 284 SNKLVIK 290
>gi|164660242|ref|XP_001731244.1| hypothetical protein MGL_1427 [Malassezia globosa CBS 7966]
gi|159105144|gb|EDP44030.1| hypothetical protein MGL_1427 [Malassezia globosa CBS 7966]
Length = 564
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVG L T+ LR F+ YG I S+ IP G+ CGFVQFA++++A A+ ++
Sbjct: 462 DPTNTTVFVGSLFSLATENTLRTLFAPYGPIQSINIPRGQDCGFVQFASKQDAARAIAEM 521
Query: 112 NG-TVIGKQSFRADYGN 127
G ++G + R +G
Sbjct: 522 QGFQIVGGGALRLSWGR 538
>gi|356574477|ref|XP_003555373.1| PREDICTED: zinc finger CCCH domain-containing protein 40-like
[Glycine max]
Length = 481
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D S T++VGGLD VT++DLR F +GEI S+K+ + + C FV + RE AE+A +L
Sbjct: 224 DESIKTLYVGGLDARVTEQDLRDHFYAHGEIESIKMVLQRACAFVTYTTREGAEKAAEEL 283
Query: 112 NGTVIGK 118
+ ++ K
Sbjct: 284 SNKLVIK 290
>gi|357462041|ref|XP_003601302.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355490350|gb|AES71553.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 492
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 44/67 (65%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D S T++VGGLD VT++DLR F +GEI SVK+ + + C FV + RE AE+A +L
Sbjct: 224 DESIKTLYVGGLDARVTEQDLRDNFYAHGEIESVKMVLQRACAFVTYTTREGAEKAAEEL 283
Query: 112 NGTVIGK 118
+ ++ K
Sbjct: 284 SNKLVIK 290
>gi|291231285|ref|XP_002735593.1| PREDICTED: TIA-1 related protein-like [Saccoglossus kowalevskii]
Length = 409
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGL 63
MNG + S R +R AT + Q + + Q Y + +NTT+++GG+
Sbjct: 163 MNGQWLSGRAIRTNWATRKPPPPRQPETTKQLSYDDVC-------NSSSYTNTTVYIGGV 215
Query: 64 DPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRA 123
+T+ +R+ FS YG I V+I KG F++F E+A A+ +NG+ I +
Sbjct: 216 TTGLTEGKMRETFSHYGHIQEVRIFPDKGYAFIRFMTHESAAHAIVSVNGSQINGHMVKC 275
Query: 124 DYGNQWSGAYYGGQ--VYDGY 142
+G + S Y Q Y GY
Sbjct: 276 SWGKESSDPLYQAQPNTYPGY 296
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 50 EGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRE 102
+ D+SN +FVG L V DL+ F+ +G+I+ ++ KG GFV F N+
Sbjct: 95 KKDTSNHHHVFVGDLSSEVDTPDLKAAFAPFGQISDARVVKDLQTNKSKGYGFVSFLNKV 154
Query: 103 NAEEALHKLNGTVIGKQSFRADYGNQ 128
+AE A+ +NG + ++ R ++ +
Sbjct: 155 DAENAIQGMNGQWLSGRAIRTNWATR 180
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENA 104
+ D+ T++VG LD VT+ + Q F Q G S K+ G C FV+F +A
Sbjct: 8 DDDALPRTLYVGNLDRQVTEAFILQLFGQIGPCKSCKMIAEHGGNDPYC-FVEFVEHSHA 66
Query: 105 EEALHKLNGTVIGKQSFRADYG 126
AL +NG +I + + ++
Sbjct: 67 AAALQTMNGRMILGKEVKVNWA 88
>gi|356549608|ref|XP_003543184.1| PREDICTED: zinc finger CCCH domain-containing protein 40-like
[Glycine max]
Length = 467
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D S T++VGGLD VT++DLR F +GEI S+K+ + + C FV + RE AE+A +L
Sbjct: 224 DESIKTLYVGGLDARVTEQDLRDHFYAHGEIESIKMVLQRACAFVTYTTREGAEKAAEEL 283
Query: 112 NGTVIGK 118
+ ++ K
Sbjct: 284 SNKLVIK 290
>gi|353239139|emb|CCA71062.1| hypothetical protein PIIN_04997 [Piriformospora indica DSM 11827]
Length = 393
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSG-------YQQQYSSQGGYASNGAPGQ--GPQSEGDSS 54
M GV C RP+R+ A + + + Q S N Q + D
Sbjct: 105 MQGVLCLGRPIRLSRAHAKDRARDKPELVLFANQRSRDERQRDNIVIDQFNAQWASVDPK 164
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
NT +FVGG+ P V ++L F+ G I +V GKGC F+ FA + +A A+ +L+G
Sbjct: 165 NTKVFVGGISPRVLLQELVNRFAAMGVITNVNF--GKGCAFISFARKHDAALAIERLDGM 222
Query: 115 VIGKQSFRADYGN 127
++ +S R +
Sbjct: 223 IMDGKSLRVTWSR 235
>gi|238881096|gb|EEQ44734.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 875
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 49/75 (65%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL +V++ L F +G I VKIP GK CGFV+++NRE AEEA+ +
Sbjct: 509 DPNNTTVFVGGLSSDVSEPTLHTLFKPFGLIQQVKIPPGKNCGFVKYSNREEAEEAIAAM 568
Query: 112 NGTVIGKQSFRADYG 126
G VIG R +G
Sbjct: 569 QGFVIGGNRVRLSWG 583
>gi|68472181|ref|XP_719886.1| hypothetical protein CaO19.6790 [Candida albicans SC5314]
gi|68472416|ref|XP_719769.1| hypothetical protein CaO19.14082 [Candida albicans SC5314]
gi|46441601|gb|EAL00897.1| hypothetical protein CaO19.14082 [Candida albicans SC5314]
gi|46441727|gb|EAL01022.1| hypothetical protein CaO19.6790 [Candida albicans SC5314]
Length = 887
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 49/75 (65%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL +V++ L F +G I VKIP GK CGFV+++NRE AEEA+ +
Sbjct: 517 DPNNTTVFVGGLSSDVSEPTLHTLFKPFGLIQQVKIPPGKNCGFVKYSNREEAEEAIAAM 576
Query: 112 NGTVIGKQSFRADYG 126
G VIG R +G
Sbjct: 577 QGFVIGGNRVRLSWG 591
>gi|303279645|ref|XP_003059115.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458951|gb|EEH56247.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 419
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D S TT+F+GG+D VT+ DL+ F YGEI S++ K CGFV F +R AE+A L
Sbjct: 230 DKSITTLFIGGMDERVTEGDLKDTFYAYGEIKSIRCVHAKNCGFVTFTDRAGAEKAAEAL 289
Query: 112 NGTVI 116
+G ++
Sbjct: 290 SGDLV 294
>gi|302837077|ref|XP_002950098.1| hypothetical protein VOLCADRAFT_104604 [Volvox carteri f.
nagariensis]
gi|300264571|gb|EFJ48766.1| hypothetical protein VOLCADRAFT_104604 [Volvox carteri f.
nagariensis]
Length = 1079
Score = 66.6 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 42/125 (33%), Positives = 59/125 (47%), Gaps = 26/125 (20%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFANR 101
GD T ++VG L P V +E L+ F ++G IASVK+ G+ CGFV F R
Sbjct: 217 GDPFTTNLYVGNLAPEVDEEVLKIEFGRFGAIASVKVMWPRDEEQRRKGRNCGFVAFMRR 276
Query: 102 ENAEEALHKLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAA 161
++AE A+ KLNG + +G +++ G+G AIP P P A
Sbjct: 277 DDAETAMRKLNGITL-----------------HGNELHIGWGKAIPLPAIPIYDPREGAV 319
Query: 162 YGAYP 166
A P
Sbjct: 320 VSAIP 324
>gi|297849030|ref|XP_002892396.1| hypothetical protein ARALYDRAFT_470757 [Arabidopsis lyrata subsp.
lyrata]
gi|297338238|gb|EFH68655.1| hypothetical protein ARALYDRAFT_470757 [Arabidopsis lyrata subsp.
lyrata]
Length = 481
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+S D S T++VGGL+ + ++D+R F YGEI S++I K C FV + +RE AE+A
Sbjct: 220 ESPDDESIKTLYVGGLNSRILEQDIRDQFYAYGEIESIRILADKACAFVTYTSREGAEKA 279
Query: 108 LHKL-NGTVIGKQSFRADYGN 127
+L N V+ Q + +G
Sbjct: 280 AQELANRLVVNGQRLKLTWGR 300
>gi|221128187|ref|XP_002162583.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Hydra
magnipapillata]
Length = 470
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+S D S TT++VGGLD + ++DLR F QYGEI SV + K CGF+ + +R+ AE A
Sbjct: 224 ESPSDKSITTLYVGGLDERIKEDDLRNFFYQYGEIRSVVVASNKSCGFICYTSRQAAEMA 283
Query: 108 LHK-LNGTVIGKQSFRADYG 126
+ N +I + + +G
Sbjct: 284 AERSFNKVIIKGKRLKVLWG 303
>gi|195382900|ref|XP_002050166.1| GJ21992 [Drosophila virilis]
gi|194144963|gb|EDW61359.1| GJ21992 [Drosophila virilis]
Length = 910
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 9/122 (7%)
Query: 14 MRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLR 73
M + +A + + Q S ASN G GD + T +++G L+P ++++ L
Sbjct: 150 MAVASAPVSQQQKPEPQAPSTSQQASNARDAGGSFDTGDPNTTNLYLGNLNPKISEQQLM 209
Query: 74 QPFSQYGEIASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRAD 124
+ F +YG +AS+KI G+ CGFV + +R++AE AL LNG I R
Sbjct: 210 EIFGRYGPLASIKIMWPRSEEEKQRGRNCGFVAYMSRKDAERALRTLNGRYIMGYEMRLG 269
Query: 125 YG 126
+G
Sbjct: 270 WG 271
>gi|242008705|ref|XP_002425142.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212508823|gb|EEB12404.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 849
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 26/111 (23%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFANR 101
GD + T I++G L+P +T++ L + F +YG +AS+KI GK CGFV F NR
Sbjct: 178 GDPNTTNIYLGNLNPKITEQQLMELFGRYGPLASIKIMWPRTDEEKARGKNCGFVAFMNR 237
Query: 102 ENAEEALHKLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDP 152
++ E A+ LNG + + + G+G +P P+ P
Sbjct: 238 KDGERAMRNLNGKDVMQYEMKL-----------------GWGKTVPIPHHP 271
>gi|294658145|ref|XP_002770728.1| DEHA2F02596p [Debaryomyces hansenii CBS767]
gi|202952907|emb|CAR66259.1| DEHA2F02596p [Debaryomyces hansenii CBS767]
Length = 747
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 52/83 (62%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANREN 103
GQ Q D +NTT+FVGGL VT++ L F +G I VKIP GK CGF+++++RE
Sbjct: 411 GQHGQPFTDPNNTTVFVGGLSSEVTEQTLFTLFKPFGIIQQVKIPPGKNCGFIKYSSREE 470
Query: 104 AEEALHKLNGTVIGKQSFRADYG 126
AEEA+ + G +IG R +G
Sbjct: 471 AEEAIAAMQGFIIGGNRVRLSWG 493
>gi|297745955|emb|CBI16011.3| unnamed protein product [Vitis vinifera]
Length = 349
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 44 GQGPQSE--GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANR 101
G+ P E D S T++VGGLD VT++DLR F +GEI SV++ + + C FV + R
Sbjct: 214 GEMPSLEPPEDESIKTLYVGGLDARVTEQDLRDHFYAHGEIESVRMVLQRACAFVTYTTR 273
Query: 102 ENAEEALHKLNGTVIGK 118
E AE+A +L+ ++ K
Sbjct: 274 EGAEKAAEELSNKLVIK 290
>gi|225434698|ref|XP_002280897.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like
[Vitis vinifera]
Length = 474
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D S T++VGGLD VT++DLR F +GEI SV++ + + C FV + RE AE+A +L
Sbjct: 224 DESIKTLYVGGLDARVTEQDLRDHFYAHGEIESVRMVLQRACAFVTYTTREGAEKAAEEL 283
Query: 112 NGTVIGK 118
+ ++ K
Sbjct: 284 SNKLVIK 290
>gi|47086019|ref|NP_998379.1| pre-mRNA-splicing factor RBM22 [Danio rerio]
gi|326677871|ref|XP_003200934.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Danio rerio]
gi|82237380|sp|Q6NZZ9.1|RBM22_DANRE RecName: Full=Pre-mRNA-splicing factor RBM22; AltName:
Full=RNA-binding motif protein 22
gi|41388933|gb|AAH65892.1| RNA binding motif protein 22 [Danio rerio]
gi|49619055|gb|AAT68112.1| FLJ10290-like [Danio rerio]
Length = 425
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D S TT+++GGL NVTD +LR F Q+GEI ++ I + C F+QFA R+ AE A K
Sbjct: 228 DKSITTLYIGGLGENVTDSELRNHFYQFGEIRTITIVQRQQCAFIQFATRQAAETAAEKS 287
Query: 111 LNGTVIGKQSFRADYG 126
N +I + +G
Sbjct: 288 FNKLIINGRRLNVKWG 303
>gi|384245275|gb|EIE18770.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 351
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 66/128 (51%), Gaps = 7/128 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+++M+G SR +R G A +Q +SQ +A+ +++ D N ++V
Sbjct: 168 LSQMSGTMLGSRRIRCGWAQ-------HKQENSQASFAAVDRVSTLSRAQADPENANVYV 220
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G L P+V+D +L+ SQ+G + VKI G F QFA+ +A A+ L+G +G ++
Sbjct: 221 GNLAPDVSDAELQTAVSQFGAVLDVKIYRKGGYAFAQFASHADAVRAIVGLSGQNLGGKA 280
Query: 121 FRADYGNQ 128
+ +G
Sbjct: 281 LKCSWGRH 288
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENA 104
GD++ ++VG L P VTD L++ FS G++ +KI K G GFVQF + A
Sbjct: 18 GDAAKA-LYVGNLHPFVTDAMLQEIFSTLGQVGEIKIIKDKLTGLSAGYGFVQFLDHRAA 76
Query: 105 EEALHKLNGTVIGKQSFRADYGNQ 128
+ AL LNG V+ Q R ++ Q
Sbjct: 77 DMALQSLNGRVLHGQELRVNWAFQ 100
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQF 98
Q Q E +S IFVG L ++ D+ L + F G A ++ KG GFV F
Sbjct: 100 QKDQREDSASQFQIFVGDLASDINDKLLCEAFQSCG-CADARVMWDHNTGRSKGYGFVSF 158
Query: 99 ANRENAEEALHKLNGTVIGKQSFRADY 125
R +AE+AL +++GT++G + R +
Sbjct: 159 KTRADAEQALSQMSGTMLGSRRIRCGW 185
>gi|157422918|gb|AAI53464.1| RNA binding motif protein 22 [Danio rerio]
Length = 425
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D S TT+++GGL NVTD +LR F Q+GEI ++ I + C F+QFA R+ AE A K
Sbjct: 228 DKSITTLYIGGLGENVTDSELRNHFYQFGEIRTITIVQRQQCAFIQFATRQAAETAAEKS 287
Query: 111 LNGTVIGKQSFRADYG 126
N +I + +G
Sbjct: 288 FNKLIINGRRLNVKWG 303
>gi|326677860|ref|XP_003200931.1| PREDICTED: pre-mRNA-splicing factor RBM22-like, partial [Danio
rerio]
Length = 407
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D S TT+++GGL NVTD +LR F Q+GEI ++ I + C F+QFA R+ AE A K
Sbjct: 210 DKSITTLYIGGLGENVTDSELRNHFYQFGEIRTITIVQRQQCAFIQFATRQAAETAAEKS 269
Query: 111 LNGTVIGKQSFRADYG 126
N +I + +G
Sbjct: 270 FNKLIINGRRLNVKWG 285
>gi|18390760|ref|NP_563788.1| pre-mRNA-splicing factor RBM22/SLT11 [Arabidopsis thaliana]
gi|75335266|sp|Q9LNV5.1|C3H4_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 4;
Short=AtC3H4
gi|8778549|gb|AAF79557.1|AC022464_15 F22G5.30 [Arabidopsis thaliana]
gi|332189993|gb|AEE28114.1| pre-mRNA-splicing factor RBM22/SLT11 [Arabidopsis thaliana]
Length = 481
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+S D S T++VGGL+ + ++D+R F +GEI S++I K C FV + +RE AE+A
Sbjct: 220 ESPDDESIKTLYVGGLNSRILEQDIRDQFYAHGEIESIRILADKACAFVTYTSREGAEKA 279
Query: 108 LHKL-NGTVIGKQSFRADYG 126
+L N VI Q + +G
Sbjct: 280 AQELSNRLVINGQRLKLTWG 299
>gi|24649513|ref|NP_732942.1| Rox8, isoform B [Drosophila melanogaster]
gi|24649515|ref|NP_732943.1| Rox8, isoform C [Drosophila melanogaster]
gi|7301090|gb|AAF56224.1| Rox8, isoform C [Drosophila melanogaster]
gi|7301091|gb|AAF56225.1| Rox8, isoform B [Drosophila melanogaster]
Length = 464
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 23/118 (19%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 95
+PG P+++ SS+ IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 82 SPGNQPKTD-ISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAF 140
Query: 96 VQFANRENAEEALHKLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPS 153
V F + AE A+ +NG IG +S R ++ + +PPP +PS
Sbjct: 141 VSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTR----------------KLPPPREPS 182
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 63/129 (48%), Gaps = 15/129 (11%)
Query: 4 MNGVYCSSRPMRIGAAT-----PRKSSGYQQQYSSQGGYASNGAPGQGPQ--------SE 50
MNG + SR +R +T PR+ S Q GG NG+ +G Q ++
Sbjct: 156 MNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQ 215
Query: 51 GDSSNTTIFVGGLDPNVTDEDL-RQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL- 108
+NTT++ GG PNV +DL + F Q+G I V++ KG F++F +E A A+
Sbjct: 216 SSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIE 275
Query: 109 HKLNGTVIG 117
H N V G
Sbjct: 276 HTHNSEVHG 284
>gi|195504962|ref|XP_002099304.1| GE10834 [Drosophila yakuba]
gi|194185405|gb|EDW99016.1| GE10834 [Drosophila yakuba]
Length = 464
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 23/118 (19%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 95
+PG P+++ SS+ IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 82 SPGNQPKTD-ISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAF 140
Query: 96 VQFANRENAEEALHKLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPS 153
V F + AE A+ +NG IG +S R ++ + +PPP +PS
Sbjct: 141 VSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTR----------------KLPPPREPS 182
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 63/129 (48%), Gaps = 15/129 (11%)
Query: 4 MNGVYCSSRPMRIGAAT-----PRKSSGYQQQYSSQGGYASNGAPGQGPQ--------SE 50
MNG + SR +R +T PR+ S Q GG NG+ +G Q ++
Sbjct: 156 MNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQ 215
Query: 51 GDSSNTTIFVGGLDPNVTDEDL-RQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL- 108
+NTT++ GG PNV +DL + F Q+G I V++ KG F++F +E A A+
Sbjct: 216 SSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIHDVRVFKDKGFSFIKFVTKEAAAHAIE 275
Query: 109 HKLNGTVIG 117
H N V G
Sbjct: 276 HTHNSEVHG 284
>gi|195573327|ref|XP_002104645.1| GD18328 [Drosophila simulans]
gi|194200572|gb|EDX14148.1| GD18328 [Drosophila simulans]
Length = 824
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 23/128 (17%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 95
+PG P+++ SS+ IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 82 SPGNQPKTDI-SSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAF 140
Query: 96 VQFANRENAEEALHKLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMY 155
V F + AE A+ +NG IG +S R ++ + +PPP +PS
Sbjct: 141 VSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTR----------------KLPPPREPSKX 184
Query: 156 AAAAAAYG 163
Y
Sbjct: 185 XXXXEVYN 192
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 54 SNTTIFVGGLDPNVTDEDL-RQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL-HKL 111
+NTT++ GG PNV +DL + F Q+G I V++ KG F++F +E A A+ H
Sbjct: 197 TNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTH 256
Query: 112 NGTVIG 117
N V G
Sbjct: 257 NSEVHG 262
>gi|15450878|gb|AAK96710.1| Unknown protein [Arabidopsis thaliana]
gi|21387095|gb|AAM47951.1| unknown protein [Arabidopsis thaliana]
Length = 481
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+S D S T++VGGL+ + ++D+R F +GEI S++I K C FV + +RE AE+A
Sbjct: 220 ESPDDESIKTLYVGGLNSRILEQDIRDQFYAHGEIESIRILADKACAFVTYTSREGAEKA 279
Query: 108 LHKL-NGTVIGKQSFRADYG 126
+L N VI Q + +G
Sbjct: 280 AQELSNRLVINGQRLKLTWG 299
>gi|194910009|ref|XP_001982056.1| GG12380 [Drosophila erecta]
gi|190656694|gb|EDV53926.1| GG12380 [Drosophila erecta]
Length = 464
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 23/118 (19%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 95
+PG P+++ SS+ IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 82 SPGNQPKTD-ISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAF 140
Query: 96 VQFANRENAEEALHKLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPS 153
V F + AE A+ +NG IG +S R ++ + +PPP +PS
Sbjct: 141 VSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTR----------------KLPPPREPS 182
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 63/129 (48%), Gaps = 15/129 (11%)
Query: 4 MNGVYCSSRPMRIGAAT-----PRKSSGYQQQYSSQGGYASNGAPGQGPQ--------SE 50
MNG + SR +R +T PR+ S Q GG NG+ +G Q ++
Sbjct: 156 MNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQ 215
Query: 51 GDSSNTTIFVGGLDPNVTDEDL-RQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL- 108
+NTT++ GG PNV +DL + F Q+G I V++ KG F++F +E A A+
Sbjct: 216 SSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIE 275
Query: 109 HKLNGTVIG 117
H N V G
Sbjct: 276 HTHNSEVHG 284
>gi|17944383|gb|AAL48083.1| RE71384p [Drosophila melanogaster]
Length = 470
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 23/118 (19%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 95
+PG P+++ SS+ IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 82 SPGNQPKTD-ISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAF 140
Query: 96 VQFANRENAEEALHKLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPS 153
V F + AE A+ +NG IG +S R ++ + +PPP +PS
Sbjct: 141 VSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTR----------------KLPPPREPS 182
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 63/129 (48%), Gaps = 15/129 (11%)
Query: 4 MNGVYCSSRPMRIGAAT-----PRKSSGYQQQYSSQGGYASNGAPGQGPQ--------SE 50
MNG + SR +R +T PR+ S Q GG NG+ +G Q ++
Sbjct: 156 MNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQ 215
Query: 51 GDSSNTTIFVGGLDPNVTDEDL-RQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL- 108
+NTT++ GG PNV +DL + F Q+G I V++ KG F++F +E A A+
Sbjct: 216 SSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIE 275
Query: 109 HKLNGTVIG 117
H N V G
Sbjct: 276 HTHNSEVHG 284
>gi|24649519|ref|NP_732945.1| Rox8, isoform D [Drosophila melanogaster]
gi|442620772|ref|NP_732944.2| Rox8, isoform E [Drosophila melanogaster]
gi|442620774|ref|NP_001262897.1| Rox8, isoform G [Drosophila melanogaster]
gi|442620776|ref|NP_001262898.1| Rox8, isoform H [Drosophila melanogaster]
gi|23172126|gb|AAN13978.1| Rox8, isoform D [Drosophila melanogaster]
gi|211938549|gb|ACJ13171.1| FI04408p [Drosophila melanogaster]
gi|440217818|gb|AAN13977.2| Rox8, isoform E [Drosophila melanogaster]
gi|440217819|gb|AGB96277.1| Rox8, isoform G [Drosophila melanogaster]
gi|440217820|gb|AGB96278.1| Rox8, isoform H [Drosophila melanogaster]
Length = 470
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 23/118 (19%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 95
+PG P+++ SS+ IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 82 SPGNQPKTD-ISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAF 140
Query: 96 VQFANRENAEEALHKLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPS 153
V F + AE A+ +NG IG +S R ++ + +PPP +PS
Sbjct: 141 VSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTR----------------KLPPPREPS 182
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 63/129 (48%), Gaps = 15/129 (11%)
Query: 4 MNGVYCSSRPMRIGAAT-----PRKSSGYQQQYSSQGGYASNGAPGQGPQ--------SE 50
MNG + SR +R +T PR+ S Q GG NG+ +G Q ++
Sbjct: 156 MNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQ 215
Query: 51 GDSSNTTIFVGGLDPNVTDEDL-RQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL- 108
+NTT++ GG PNV +DL + F Q+G I V++ KG F++F +E A A+
Sbjct: 216 SSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIE 275
Query: 109 HKLNGTVIG 117
H N V G
Sbjct: 276 HTHNSEVHG 284
>gi|297822673|ref|XP_002879219.1| hypothetical protein ARALYDRAFT_344719 [Arabidopsis lyrata subsp.
lyrata]
gi|297325058|gb|EFH55478.1| hypothetical protein ARALYDRAFT_344719 [Arabidopsis lyrata subsp.
lyrata]
Length = 464
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+S D S T++VGGL+ V ++D+R F YGEI S++I K C FV + RE AE+A
Sbjct: 220 ESPEDQSIKTLYVGGLNSRVLEQDIRDQFYAYGEIESIRILAEKACAFVTYTTREGAEKA 279
Query: 108 LHKL-NGTVIGKQSFRADYGN 127
+L N V+ Q + +G
Sbjct: 280 AEELSNRLVVNGQRLKLTWGR 300
>gi|241953763|ref|XP_002419603.1| RNA-binding protein, putative; U1 snRNP protein, putative [Candida
dubliniensis CD36]
gi|223642943|emb|CAX43198.1| RNA-binding protein, putative [Candida dubliniensis CD36]
Length = 792
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 48/75 (64%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL +V++ L F +G I VKIP GK CGFV+++ RE AEEA+ +
Sbjct: 461 DPNNTTVFVGGLSADVSEPTLHTLFKPFGLIQQVKIPPGKNCGFVKYSTREEAEEAIAAM 520
Query: 112 NGTVIGKQSFRADYG 126
G VIG R +G
Sbjct: 521 QGFVIGGNRVRLSWG 535
>gi|221504135|gb|EEE29812.1| RRM / zinc finger (CCCH type) domain-containing protein [Toxoplasma
gondii VEG]
Length = 400
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 47/68 (69%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK 110
D++NTT+FVGGL VT++DLR F +GE+ S+K+ G+ F+ +A R +AEEA+ +
Sbjct: 228 ADTTNTTVFVGGLTKGVTEQDLRDAFYAFGELLSIKMYRGQQFAFLCYAERSSAEEAVKQ 287
Query: 111 LNGTVIGK 118
L+ ++ K
Sbjct: 288 LHSNLVIK 295
>gi|237840441|ref|XP_002369518.1| RRM / zinc finger (CCCH type) domain-containing protein [Toxoplasma
gondii ME49]
gi|211967182|gb|EEB02378.1| RRM / zinc finger (CCCH type) domain-containing protein [Toxoplasma
gondii ME49]
gi|221483211|gb|EEE21535.1| lysine-specific histone demethylase, putative [Toxoplasma gondii
GT1]
Length = 400
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 47/68 (69%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK 110
D++NTT+FVGGL VT++DLR F +GE+ S+K+ G+ F+ +A R +AEEA+ +
Sbjct: 228 ADTTNTTVFVGGLTKGVTEQDLRDAFYAFGELLSIKMYRGQQFAFLCYAERSSAEEAVKQ 287
Query: 111 LNGTVIGK 118
L+ ++ K
Sbjct: 288 LHSNLVIK 295
>gi|194383074|dbj|BAG59093.1| unnamed protein product [Homo sapiens]
Length = 412
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 64/142 (45%), Gaps = 20/142 (14%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQWSGA 132
+ASVKI + CGFV F NR +AE AL LNG +I SF G W A
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMI--MSFEMKLG--WGKA 355
Query: 133 YYGGQVYDG-----YGYAIPPP 149
+ +PPP
Sbjct: 356 VPIPPHPIYIPPSMMEHTLPPP 377
>gi|390333471|ref|XP_794306.3| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
[Strongylocentrotus purpuratus]
Length = 1300
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 60/126 (47%), Gaps = 21/126 (16%)
Query: 10 SSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTD 69
+ +P +G+A+ + ++YS G GD + T IF+G ++P + +
Sbjct: 229 TPQPTSVGSASDIRLPAGIEEYS------------YGSHDYGDPNTTNIFLGSINPKMNE 276
Query: 70 EDLRQPFSQYGEIASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
E L + F QYG +ASVKI + CGFV F NR +AE A+ LNG I
Sbjct: 277 EMLCKEFVQYGPLASVKIMWPRTDAERQRNRNCGFVAFMNRRDAERAMRALNGKEIMNYE 336
Query: 121 FRADYG 126
+ +G
Sbjct: 337 MKLGWG 342
>gi|367014399|ref|XP_003681699.1| hypothetical protein TDEL_0E02450 [Torulaspora delbrueckii]
gi|359749360|emb|CCE92488.1| hypothetical protein TDEL_0E02450 [Torulaspora delbrueckii]
Length = 472
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 22/148 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAA-----TPRKSSGYQQQYSSQGGYASNGAPG----------- 44
+ EM G + R +R+G+A R G + + S+ P
Sbjct: 202 LQEMTGTFLKGRAIRVGSAGHQNQRNRNGPGLENKLKGLNATVSSPKPANISSTNFSQFI 261
Query: 45 ----QGP--QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
Q P S D +NTT+FV L VT+ +L+ F +G + K+P K CGFVQ+
Sbjct: 262 LPTQQLPPLNSFTDRNNTTLFVSSLSHMVTENELKAFFQPFGNVIYAKLPENKQCGFVQY 321
Query: 99 ANRENAEEALHKLNGTVIGKQSFRADYG 126
+R +AE A+ KL G I + +G
Sbjct: 322 VDRASAEMAILKLQGFPIRGSRIKISWG 349
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 7/78 (8%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAE 105
S+ ++FVG L PNVT+ DL + F S+ ++ K+ V KG FV+F N+E+ +
Sbjct: 140 SNEISVFVGDLAPNVTESDLFELFISKCPSTSNAKVMYDQVTGVSKGYAFVRFGNQEDQQ 199
Query: 106 EALHKLNGTVIGKQSFRA 123
AL ++ GT + ++ R
Sbjct: 200 RALQEMTGTFLKGRAIRV 217
>gi|365986018|ref|XP_003669841.1| hypothetical protein NDAI_0D02840 [Naumovozyma dairenensis CBS 421]
gi|343768610|emb|CCD24598.1| hypothetical protein NDAI_0D02840 [Naumovozyma dairenensis CBS 421]
Length = 426
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 64/131 (48%), Gaps = 20/131 (15%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ EM G RP+ + +T + + GG G P D T+F+
Sbjct: 229 IQEMQGKEIDGRPINVDMSTSKPA----------GGNDRAKKFGDVPSEPSD----TLFL 274
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEALHKLNGT 114
G L N +++ + FS+YGEI SV+IP KG G+VQF+N E+A++AL L G
Sbjct: 275 GNLSFNADKDNIYETFSKYGEIISVRIPTHPETEQPKGFGYVQFSNIEDAKKALEGLQGE 334
Query: 115 VIGKQSFRADY 125
I ++ R DY
Sbjct: 335 YIDNRAVRLDY 345
>gi|383136461|gb|AFG49308.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136463|gb|AFG49309.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136465|gb|AFG49310.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136467|gb|AFG49311.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136469|gb|AFG49312.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136471|gb|AFG49313.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136473|gb|AFG49314.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136475|gb|AFG49315.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136477|gb|AFG49316.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136479|gb|AFG49317.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136481|gb|AFG49318.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136483|gb|AFG49319.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136485|gb|AFG49320.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136487|gb|AFG49321.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136489|gb|AFG49322.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136491|gb|AFG49323.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136493|gb|AFG49324.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
Length = 67
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 40/67 (59%), Gaps = 20/67 (29%)
Query: 89 VGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG--------------------NQ 128
VGKGCGFVQFANR AEEAL +L+GTVI +Q+ R +G NQ
Sbjct: 1 VGKGCGFVQFANRACAEEALQRLHGTVIRQQTIRLSWGRSPANKQQSQPQGQQPQSDPNQ 60
Query: 129 WSGAYYG 135
W+GAYYG
Sbjct: 61 WNGAYYG 67
>gi|374256067|gb|AEZ00895.1| putative zinc finger CCCH-type family protein, partial [Elaeis
guineensis]
Length = 307
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D S T++VGGLD +T++DLR F +GEI S+++ + + C FV + RE AE+A +L
Sbjct: 224 DESIKTLYVGGLDARITEQDLRDHFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAEEL 283
Query: 112 -NGTVIGKQSFRADYGN 127
N VI + +G
Sbjct: 284 ANKLVIKGLRLKLMWGK 300
>gi|361068433|gb|AEW08528.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
Length = 67
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 40/67 (59%), Gaps = 20/67 (29%)
Query: 89 VGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG--------------------NQ 128
VGKGCGFVQFANR AEEAL +L+GTVI +Q+ R +G NQ
Sbjct: 1 VGKGCGFVQFANRACAEEALQRLHGTVIRQQTIRLSWGRSPANKQNSQPQGQQPQSDPNQ 60
Query: 129 WSGAYYG 135
W+GAYYG
Sbjct: 61 WNGAYYG 67
>gi|401399032|ref|XP_003880458.1| hypothetical protein NCLIV_008920 [Neospora caninum Liverpool]
gi|325114868|emb|CBZ50424.1| hypothetical protein NCLIV_008920 [Neospora caninum Liverpool]
Length = 400
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 47/68 (69%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK 110
D++NTT+FVGGL VT++DLR F +GE+ S+K+ G+ F+ +A R +AEEA+ +
Sbjct: 228 ADTTNTTVFVGGLTKGVTEQDLRDAFYAFGELLSIKMYRGQQYAFLCYAERSSAEEAVKQ 287
Query: 111 LNGTVIGK 118
L+ ++ K
Sbjct: 288 LHSNLVIK 295
>gi|158828226|gb|ABW81104.1| unknown [Cleome spinosa]
Length = 504
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D S T++VGGL+ + ++D+R F YGEI S++I K C FV + RE AE+A +L
Sbjct: 224 DESIKTLYVGGLNSRILEQDIRDQFYAYGEIESIRILPEKACAFVTYTTREGAEKATEEL 283
Query: 112 -NGTVIGKQSFRADYGN 127
N V+ Q + +G
Sbjct: 284 CNKLVVNGQRLKLTWGR 300
>gi|402587661|gb|EJW81596.1| nucleolysin TIAR [Wuchereria bancrofti]
Length = 440
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 10/143 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT RK +G + G Y + ++ NT+++V
Sbjct: 239 IEQMNGQWLGRRTIRTNWAT-RKPTGTG---AGDGQYGRSELNYDDVYNQTGPDNTSVYV 294
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G ++ N DEDLR F ++G I V+I +G FV+F +++A A+ K+NG + Q+
Sbjct: 295 GNVNSNANDEDLRAAFDKFGRILEVRIFKSQGYAFVRFDKKDSACNAICKMNGQELCGQN 354
Query: 121 FRADYG------NQWSGAYYGGQ 137
+ +G NQ + AY Q
Sbjct: 355 IKCSWGRTPEGHNQQANAYNQAQ 377
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 55/96 (57%), Gaps = 7/96 (7%)
Query: 40 NGAPGQGPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKG 92
N A G Q++ D+S + +FVG L P V ++ L+ F+ +GE++ K+ KG
Sbjct: 164 NWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAFAPFGEVSDAKVIRDATTLKSKG 223
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV + RE AE A+ ++NG +G+++ R ++ +
Sbjct: 224 YGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATR 259
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC----GFVQFANRENAEEALHKLN 112
T++VG LDP++T++ + F Q G + K+ + G FV+FA+ A +AL +N
Sbjct: 94 TVYVGNLDPSITEDFITTLFGQIGAVTKTKV-IFDGTNDPYAFVEFADHYTAAQALQAMN 152
Query: 113 GTVIGKQSFRADYGNQ 128
V+ ++ + ++ +
Sbjct: 153 KRVLLEKEMKVNWATE 168
>gi|405969462|gb|EKC34433.1| hypothetical protein CGI_10025795 [Crassostrea gigas]
Length = 2718
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/130 (30%), Positives = 59/130 (45%), Gaps = 26/130 (20%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
GP D + T I+VG ++P +T+ +L + F ++G +ASVKI G+ CGFV
Sbjct: 1191 GPYDPVDETTTNIYVGNINPKMTEPELCEIFGRFGPLASVKIMWPRTDEERSRGRNCGFV 1250
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYA 156
F NR++ E AL+ L G I + + G+G A+P P P
Sbjct: 1251 AFMNRKDGERALNALKGKDIMQYEMKL-----------------GWGKAVPIPPHPKYIP 1293
Query: 157 AAAAAYGAYP 166
A A P
Sbjct: 1294 PALAEMTQPP 1303
>gi|268578407|ref|XP_002644186.1| Hypothetical protein CBG17168 [Caenorhabditis briggsae]
Length = 244
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 11/123 (8%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGL 63
MNG + R +R A + S + + + + + S A NT+++VG +
Sbjct: 66 MNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKA-----------DNTSVYVGNI 114
Query: 64 DPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRA 123
P TD DLR FS YG+IA V++ + FV++ +E A +A+ ++NG + R
Sbjct: 115 SPQTTDVDLRDSFSTYGDIAEVRVFKTQRYAFVRYEKKECATKAIMEMNGKELAGNQVRC 174
Query: 124 DYG 126
+G
Sbjct: 175 SWG 177
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 6/75 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEALHKL 111
+FVG L +V++E L+ F ++GE++ K+ KG GFV F N++NAE A+ +
Sbjct: 7 VFVGDLSKDVSNELLKSTFQKFGEVSEAKVIRDAQTQKSKGYGFVSFPNKQNAENAISGM 66
Query: 112 NGTVIGKQSFRADYG 126
NG IGK++ R ++
Sbjct: 67 NGKWIGKRAVRTNWA 81
>gi|133711805|gb|ABO36623.1| putative RNA-binding protein [Solanum lycopersicum]
Length = 479
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 44 GQGPQSE--GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANR 101
G+ P E D S T++VGG+D +T++DLR F +GEI S+K+ V +GC FV + R
Sbjct: 214 GEMPSLEPPDDESIRTLYVGGVDARITEQDLRDHFYAHGEIESIKMVVQRGCAFVTYTTR 273
Query: 102 ENAEEALHKLNGTVIGK 118
E A +A +L ++ K
Sbjct: 274 EGAVKAAEELANKLVIK 290
>gi|357125138|ref|XP_003564252.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like
[Brachypodium distachyon]
Length = 488
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D S T+++GGLD VT++DLR F +GEI S+++ + + C FV + RE AE+A +L
Sbjct: 224 DESIRTLYIGGLDNRVTEQDLRDQFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAEEL 283
Query: 112 NGTVIGK 118
++ K
Sbjct: 284 ANKLVIK 290
>gi|115471551|ref|NP_001059374.1| Os07g0281000 [Oryza sativa Japonica Group]
gi|75325391|sp|Q6Z358.1|C3H49_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 49;
Short=OsC3H49
gi|34394813|dbj|BAC84225.1| RRM-containing RNA-binding protein-like [Oryza sativa Japonica
Group]
gi|113610910|dbj|BAF21288.1| Os07g0281000 [Oryza sativa Japonica Group]
gi|222636833|gb|EEE66965.1| hypothetical protein OsJ_23846 [Oryza sativa Japonica Group]
Length = 486
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 43/67 (64%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D S T+++GGLD VT++DLR F +GEI ++++ + + C FV + RE AE+A +L
Sbjct: 224 DESIRTLYIGGLDSRVTEQDLRDQFYAHGEIETIRMVLQRACAFVTYTTREGAEKAAEEL 283
Query: 112 NGTVIGK 118
++ K
Sbjct: 284 ANKLVIK 290
>gi|302815924|ref|XP_002989642.1| hypothetical protein SELMODRAFT_428163 [Selaginella moellendorffii]
gi|300142613|gb|EFJ09312.1| hypothetical protein SELMODRAFT_428163 [Selaginella moellendorffii]
Length = 473
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D++ T++VGGLD VT EDL+ F YGEI S+++ + C F+ + RE+AE+A L
Sbjct: 146 DATVRTLYVGGLDERVTTEDLKDNFYSYGEIESLRLVPQRACAFITYTTREDAEKAAEDL 205
Query: 112 N-------GTVIGKQSFRADYGNQWSGAYYGGQV 138
+ ++ Q + G W A G Q+
Sbjct: 206 SFKHQSRTSKLLKWQEIKPKLGAAWPSAKNGFQL 239
>gi|390604168|gb|EIN13559.1| hypothetical protein PUNSTDRAFT_117298 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 425
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 45 QGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQ 97
QG Q++ D+SN +FVG L P V DE L++ FS +G ++ ++ +G GF+
Sbjct: 96 QGNQNKEDTSNHYHVFVGDLSPEVNDEVLQKAFSAFGSLSDARVMWDMNSGKSRGYGFLA 155
Query: 98 FANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
F ++ +AE+A+ +NG +G ++ R ++ NQ
Sbjct: 156 FRDKTDAEQAIATMNGEWLGSRAIRVNWANQ 186
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 56/141 (39%), Gaps = 15/141 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQ------------ 48
+ MNG + SR +R+ A + + + G P
Sbjct: 166 IATMNGEWLGSRAIRVNWANQKTQGAMGGGAPAPAAARPSPGLGGSPAPMNFQGGPISYE 225
Query: 49 ---SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAE 105
S+ + N+T++VG L P T DL F G + +++ +G FV+ E+A
Sbjct: 226 SVVSQTPAYNSTVYVGNLVPYCTQADLIPLFQSIGYLQEIRMQADRGFAFVKLDTHEHAA 285
Query: 106 EALHKLNGTVIGKQSFRADYG 126
A+ +L G ++ + + +G
Sbjct: 286 MAIIQLQGQMVHGRPIKCSWG 306
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-------GKGCGFV 96
G G +E ++VG L P VT+ L + F+ G + VKI G GFV
Sbjct: 5 GIGGVAEAPQRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFV 64
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
++ + AE AL LNG I R ++ Q
Sbjct: 65 EYIDMRAAETALQTLNGRKIFDTEIRVNWAYQ 96
>gi|15227567|ref|NP_180518.1| zinc finger CCCH domain-containing protein 25 [Arabidopsis
thaliana]
gi|75339110|sp|Q9ZW36.1|C3H25_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 25;
Short=AtC3H25
gi|16226863|gb|AAL16284.1|AF428354_1 At2g29580/F16P2.4 [Arabidopsis thaliana]
gi|3980378|gb|AAC95181.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|27363236|gb|AAO11537.1| At2g29580/F16P2.4 [Arabidopsis thaliana]
gi|330253181|gb|AEC08275.1| zinc finger CCCH domain-containing protein 25 [Arabidopsis
thaliana]
Length = 483
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+S D S T++VGGL+ V ++D+R F +GEI S++I K C FV + RE AE+A
Sbjct: 220 ESPEDQSIRTLYVGGLNSRVLEQDIRDQFYAHGEIESIRILAEKACAFVTYTTREGAEKA 279
Query: 108 LHKL-NGTVIGKQSFRADYGN 127
+L N V+ Q + +G
Sbjct: 280 AEELSNRLVVNGQRLKLTWGR 300
>gi|115468728|ref|NP_001057963.1| Os06g0589700 [Oryza sativa Japonica Group]
gi|113596003|dbj|BAF19877.1| Os06g0589700 [Oryza sativa Japonica Group]
Length = 399
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 12/111 (10%)
Query: 14 MRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLR 73
M + A +K S Q + ++ + N Q +++ LD ++ DE LR
Sbjct: 37 MVLYVARAQKKSERQAELKAKFEHDKN-------QKFEKLQTVNLYLKNLDDDINDEHLR 89
Query: 74 QPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEALHKLNGTVIGKQ 119
+ F +GE+AS K+ + KGCGFV FA E+A A+ K+NG ++GK+
Sbjct: 90 KLFECFGEVASCKVMLDSHGRSKGCGFVSFATVEDANNAILKMNGKMVGKK 140
>gi|410913889|ref|XP_003970421.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Takifugu rubripes]
Length = 426
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT+++GGL NVTD DL+ F Q+GEI ++ I + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYIGGLGDNVTDGDLKNFFYQFGEIRTITIVQRQQCAFIQFATRQAAEMAAEKS 287
Query: 111 LNGTVIGKQSFRADYGNQWSGAYYGGQVYDGY 142
N +I + +G S A G + DG
Sbjct: 288 FNKLIINGRRLTVKWGR--SQAARGNEGKDGL 317
>gi|361068435|gb|AEW08529.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|376339252|gb|AFB34150.1| hypothetical protein CL263Contig2_03, partial [Pinus cembra]
Length = 67
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 40/67 (59%), Gaps = 20/67 (29%)
Query: 89 VGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG--------------------NQ 128
VGKGCGFVQF+NR AEEAL +L+GTVI +Q+ R +G NQ
Sbjct: 1 VGKGCGFVQFSNRACAEEALQRLHGTVIRQQTIRLSWGRSPANKQQPQPQGQQPQSDPNQ 60
Query: 129 WSGAYYG 135
W+GAYYG
Sbjct: 61 WNGAYYG 67
>gi|348581626|ref|XP_003476578.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
[Cavia porcellus]
Length = 937
Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 150 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 207
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ASVKI + CGFV F NR +AE AL LNG +I + +G
Sbjct: 208 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWG 261
>gi|194742700|ref|XP_001953839.1| GF17967 [Drosophila ananassae]
gi|190626876|gb|EDV42400.1| GF17967 [Drosophila ananassae]
Length = 471
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 23/118 (19%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 95
+PG P+++ SS+ IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 82 SPGNQPKTD-ISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAF 140
Query: 96 VQFANRENAEEALHKLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPS 153
V F + AE A+ +NG IG +S R ++ + +PPP +P+
Sbjct: 141 VSFVKKAEAENAITAMNGQWIGSRSIRTNWSTR----------------KLPPPREPN 182
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 54 SNTTIFVGGLDPNVTDEDL-RQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL-HKL 111
+NTT++ GG PNV +DL + F Q+G I V++ KG F++F +E A A+ H
Sbjct: 220 TNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFAFIKFVTKEAAARAIEHTH 279
Query: 112 NGTVIGKQ 119
N V G Q
Sbjct: 280 NSEVHGNQ 287
>gi|431899775|gb|ELK07722.1| U2-associated protein SR140 [Pteropus alecto]
Length = 1041
Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 254 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 311
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ASVKI + CGFV F NR +AE AL LNG +I + +G
Sbjct: 312 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWG 365
>gi|281342682|gb|EFB18266.1| hypothetical protein PANDA_005047 [Ailuropoda melanoleuca]
Length = 954
Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 212 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 269
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ASVKI + CGFV F NR +AE AL LNG +I + +G
Sbjct: 270 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWG 323
>gi|384249712|gb|EIE23193.1| hypothetical protein COCSUDRAFT_23819 [Coccomyxa subellipsoidea
C-169]
Length = 464
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 39/65 (60%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D T++VGGL P V D+DLR F YGEI+S+KI + C FV +A R AE A +L
Sbjct: 214 DREIKTLYVGGLAPEVEDQDLRDHFYPYGEISSIKILSARHCAFVTYATRPAAERAAQEL 273
Query: 112 NGTVI 116
+I
Sbjct: 274 QHKLI 278
>gi|268531322|ref|XP_002630787.1| Hypothetical protein CBG02484 [Caenorhabditis briggsae]
Length = 403
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 70/126 (55%), Gaps = 8/126 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT + G Q++ S+ Y Q+ GD NT+++V
Sbjct: 189 IEQMNGQWLGRRTIRTNWAT--RKPGDQEKPSN---YNEKSYDEVYNQTSGD--NTSVYV 241
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G + N+T++++RQ F+ YG I+ V+I +G FV+F N+ A +A+ ++N +G Q
Sbjct: 242 GNI-ANLTEDEIRQAFASYGRISEVRIFKMQGYAFVKFENKNAAAKAITEMNNQDVGGQM 300
Query: 121 FRADYG 126
R +G
Sbjct: 301 VRCSWG 306
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 11/109 (10%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFV 96
PGQ P + + +FVG L V ++ LR+ F +G+++ K+ KG GFV
Sbjct: 118 PGQQPSKIDTTRHFHVFVGDLSSEVDNQKLREAFIPFGDVSDAKVIRDTNTTKSKGYGFV 177
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADY-----GNQWSGAYYGGQVYD 140
+ RE AE A+ ++NG +G+++ R ++ G+Q + Y + YD
Sbjct: 178 SYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSNYNEKSYD 226
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC----GFVQFANRENAEEALHKLN 112
T++VG LDP+V+++ + F+Q G + K+ + G FV+F++ A +AL +N
Sbjct: 43 TLYVGNLDPSVSEDFIATLFNQIGSVTKTKV-IHDGANDPYAFVEFSDHGQASQALQTMN 101
Query: 113 GTVIGKQSFRADYG 126
++ + + ++
Sbjct: 102 KRLLHDREMKVNWA 115
>gi|432878644|ref|XP_004073359.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Oryzias latipes]
Length = 426
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D S TT+++GGL NVTD DL+ F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKSITTLYIGGLGDNVTDGDLKGHFYQFGEIRTITVVQRQQCAFIQFATRQAAEMAAEKS 287
Query: 111 LNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPP 148
N ++ + +G + G D G + P
Sbjct: 288 FNKLILNGRRLTVKWGRSQAARGKDGVKDDELGIRLDP 325
>gi|195037090|ref|XP_001989998.1| GH19101 [Drosophila grimshawi]
gi|193894194|gb|EDV93060.1| GH19101 [Drosophila grimshawi]
Length = 476
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 7/93 (7%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 95
+PG P+++ SS+ IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 82 SPGNTPKTD-ISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAF 140
Query: 96 VQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
V F + AE A+ +NG IG +S R ++ +
Sbjct: 141 VSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTR 173
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 49 SEGDSSNTTIFVGGLDPNV-TDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
S+ +NTT++ GG P+V +DE + + F Q+G I V++ KG F++F +E A A
Sbjct: 217 SQSSPTNTTVYCGGFQPHVISDELMHKHFMQFGPIQDVRVFKDKGFAFIKFVAKEAAARA 276
Query: 108 LHKLNGTVIGKQSFRADYGNQ 128
+ + T + + +G +
Sbjct: 277 IEHTHNTEVHGNHVKCFWGKE 297
>gi|123391676|ref|XP_001300116.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121881103|gb|EAX87186.1| hypothetical protein TVAG_383730 [Trichomonas vaginalis G3]
Length = 180
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENA 104
G+ S T +FVG D DLR F ++G++ + KI KGCG VQFAN ++A
Sbjct: 2 GEESETCLFVGNYPLEDQDIDLRVKFMRFGKVIAAKIFTRKGSFKSKGCGIVQFANHDDA 61
Query: 105 EEALHKLNGTVIGKQSFRADYG 126
++A+ +LNGTV Q+ R +G
Sbjct: 62 QKAIDELNGTVYKGQTIRVKWG 83
>gi|348535548|ref|XP_003455262.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Oreochromis
niloticus]
Length = 427
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D S TT+++GGL VTD DL+ F Q+GEI ++ I + C F+QFA R++AE A K
Sbjct: 228 DKSITTLYIGGLGDTVTDGDLKSHFYQFGEIRTITIVQRQQCAFIQFATRQSAETAAEKS 287
Query: 111 LNGTVIGKQSFRADYG 126
N +I + +G
Sbjct: 288 FNKLIINGRRLTVKWG 303
>gi|67465872|ref|XP_649094.1| RNA-binding protein TIA-1 [Entamoeba histolytica HM-1:IMSS]
gi|56465456|gb|EAL43711.1| RNA-binding protein TIA-1, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449705857|gb|EMD45818.1| RNA-binding protein TIA-1, putative [Entamoeba histolytica KU27]
Length = 306
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 10/128 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M MNG R +++ T +S +Q S +E S N T+++
Sbjct: 187 MQMMNGEKLEGRNIKVNWVTSNIASKTEQPKRSYDEI----------NNETSSQNCTVYI 236
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G + NV +DL+Q ++YG I V++ KG F++F+ E+A A+ NG +I +
Sbjct: 237 GNIPKNVESDDLKQLLAEYGSIEEVRLNKDKGYAFIKFSKHESATSAILMCNGKIINGST 296
Query: 121 FRADYGNQ 128
R +G +
Sbjct: 297 LRCSWGRE 304
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEAL 108
N IFVGGL P V D+ L + F ++G + ++ KG GFV F +E+AE A+
Sbjct: 128 NYKIFVGGLQPEVNDDLLYKTFQKFGRVTDARVLKFTQTGKSKGYGFVTFIRKEDAETAM 187
Query: 109 HKLNGTVIGKQSFRADY 125
+NG + ++ + ++
Sbjct: 188 QMMNGEKLEGRNIKVNW 204
>gi|293349374|ref|XP_002727165.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
[Rattus norvegicus]
gi|293361281|ref|XP_002730000.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
isoform 1 [Rattus norvegicus]
Length = 985
Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 198 RRSMDVPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 255
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ASVKI + CGFV F NR +AE AL LNG +I + +G
Sbjct: 256 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWG 309
>gi|171460908|ref|NP_080752.2| U2 snRNP-associated SURP motif-containing protein isoform 2 [Mus
musculus]
Length = 985
Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 198 RRSMDVPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 255
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ASVKI + CGFV F NR +AE AL LNG +I + +G
Sbjct: 256 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWG 309
>gi|363737140|ref|XP_422593.3| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
[Gallus gallus]
Length = 1020
Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 235 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 292
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ASVKI + CGFV F NR +AE AL LNG +I + +G
Sbjct: 293 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWG 346
>gi|407038416|gb|EKE39116.1| RNA-binding protein TIA-1, putative [Entamoeba nuttalli P19]
Length = 306
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 10/128 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M MNG R +++ T +S +Q S +E S N T+++
Sbjct: 187 MQMMNGEKLEGRNIKVNWVTSNIASKTEQPKRSYDEI----------NNETSSQNCTVYI 236
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G + NV +DL+Q ++YG I V++ KG F++F+ E+A A+ NG +I +
Sbjct: 237 GNIPKNVESDDLKQLLAEYGSIEEVRLNKDKGYAFIKFSKHESATSAILMCNGKIINGST 296
Query: 121 FRADYGNQ 128
R +G +
Sbjct: 297 LRCSWGRE 304
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEAL 108
N IFVGGL P V D+ L + F ++G + ++ KG GFV F +E+AE A+
Sbjct: 128 NYKIFVGGLQPEVNDDLLYKTFQKFGRVTDARVLKFTQTGKSKGYGFVTFIRKEDAETAM 187
Query: 109 HKLNGTVIGKQSFRADY 125
+NG + ++ + ++
Sbjct: 188 QMMNGEKLEGRNIKVNW 204
>gi|195400098|ref|XP_002058655.1| GJ14540 [Drosophila virilis]
gi|194142215|gb|EDW58623.1| GJ14540 [Drosophila virilis]
Length = 472
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 7/93 (7%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 95
+PG P+++ SS+ IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 82 SPGNTPKTD-ISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAF 140
Query: 96 VQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
V F + AE A+ +NG IG +S R ++ +
Sbjct: 141 VSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTR 173
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 54 SNTTIFVGGLDPNV-TDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
+NTT++ GG PNV +DE + + F Q+G I V++ KG F++F ++E A A+ +
Sbjct: 221 TNTTVYCGGFPPNVISDELMHKHFMQFGPIQDVRVFKDKGFAFIKFVSKEAAARAIEHTH 280
Query: 113 GTVIGKQSFRADYGNQ 128
+ + + +G +
Sbjct: 281 NSEVHGNHVKCFWGKE 296
>gi|290992109|ref|XP_002678677.1| RNA recognition motif domain-containing protein [Naegleria gruberi]
gi|284092290|gb|EFC45933.1| RNA recognition motif domain-containing protein [Naegleria gruberi]
Length = 286
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 49/82 (59%), Gaps = 6/82 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK-----GCGFVQFANRENA 104
E S T+IF+G LD N T+ DLR FS+ GEIASVK+ K F+ FANRE+
Sbjct: 94 EEKSKATSIFLGSLDSNTTENDLRDAFSKCGEIASVKLGFTKQGHFLRYAFISFANREDT 153
Query: 105 EEALHKL-NGTVIGKQSFRADY 125
E+A + + +G + G+ + DY
Sbjct: 154 EKAFNAVKSGEISGQNKWDVDY 175
>gi|145347969|ref|XP_001418431.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578660|gb|ABO96724.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 386
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 58/109 (53%), Gaps = 7/109 (6%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDP-NVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANR 101
P Q D+S TT+FVGG+DP VT++D+ F QYGEI +++ K C F+ FA R
Sbjct: 221 PSQKLTPPEDASITTLFVGGVDPEKVTEDDINSRFYQYGEIKGIRVIGTKKCAFITFATR 280
Query: 102 ENAEEALHK--LNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPP 148
E AE+A +N + G++ R +G + G Q G A PP
Sbjct: 281 EGAEKAAEDAAINLEINGERC-RLQWGKSAAKKASGNQ---GSAPAPPP 325
>gi|317419983|emb|CBN82019.1| U2-associated protein SR140 [Dicentrarchus labrax]
Length = 965
Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD S T +++G ++P + +E L Q F +YG +ASVKI + CGFV
Sbjct: 193 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERARERNCGFV 252
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADYG 126
F NR +AE AL LNG +I + +G
Sbjct: 253 AFMNRRDAERALKNLNGKMIMNFEMKLGWG 282
>gi|449453956|ref|XP_004144722.1| PREDICTED: zinc finger CCCH domain-containing protein 40-like
[Cucumis sativus]
gi|449525922|ref|XP_004169965.1| PREDICTED: zinc finger CCCH domain-containing protein 40-like
[Cucumis sativus]
Length = 517
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D S T++VGGLD V+++DLR F +GEI S+++ + + C FV + RE AE+A +L
Sbjct: 224 DESIRTLYVGGLDARVSEQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAEEL 283
Query: 112 NGTVI 116
+ ++
Sbjct: 284 SNKLV 288
>gi|449509637|ref|XP_002195693.2| PREDICTED: U2 snRNP-associated SURP motif-containing protein
[Taeniopygia guttata]
Length = 961
Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 173 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 230
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ASVKI + CGFV F NR +AE AL LNG +I + +G
Sbjct: 231 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWG 284
>gi|355721758|gb|AES07367.1| U2-associated SR140 protein [Mustela putorius furo]
Length = 1008
Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 258 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 315
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ASVKI + CGFV F NR +AE AL LNG +I + +G
Sbjct: 316 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWG 369
>gi|449278574|gb|EMC86385.1| U2-associated protein SR140 [Columba livia]
Length = 965
Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 177 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 234
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ASVKI + CGFV F NR +AE AL LNG +I + +G
Sbjct: 235 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWG 288
>gi|126338260|ref|XP_001372201.1| PREDICTED: u2 snRNP-associated SURP motif-containing protein
[Monodelphis domestica]
Length = 1034
Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 246 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 303
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ASVKI + CGFV F NR +AE AL LNG +I + +G
Sbjct: 304 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWG 357
>gi|195331490|ref|XP_002032434.1| GM23518 [Drosophila sechellia]
gi|194121377|gb|EDW43420.1| GM23518 [Drosophila sechellia]
Length = 464
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 7/93 (7%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 95
+PG P+++ SS+ IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 82 SPGNQPKTD-ISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAF 140
Query: 96 VQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
V F + AE A+ +NG IG +S R ++ +
Sbjct: 141 VSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTR 173
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 64/129 (49%), Gaps = 15/129 (11%)
Query: 4 MNGVYCSSRPMRIGAAT-----PRKSSGYQQQYSSQGGYASNGAPGQGPQ--------SE 50
MNG + SR +R +T PR++S Q GG NG+ +G Q ++
Sbjct: 156 MNGQWIGSRSIRTNWSTRKLPPPREASKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQ 215
Query: 51 GDSSNTTIFVGGLDPNVTDEDL-RQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL- 108
+NTT++ GG PNV +DL + F Q+G I V++ KG F++F +E A A+
Sbjct: 216 SSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIE 275
Query: 109 HKLNGTVIG 117
H N V G
Sbjct: 276 HTHNSEVHG 284
>gi|171460910|ref|NP_001108449.1| U2 snRNP-associated SURP motif-containing protein isoform 1 [Mus
musculus]
gi|341942111|sp|Q6NV83.3|SR140_MOUSE RecName: Full=U2 snRNP-associated SURP motif-containing protein;
AltName: Full=140 kDa Ser/Arg-rich domain protein;
AltName: Full=U2-associated protein SR140
Length = 1029
Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDVPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ASVKI + CGFV F NR +AE AL LNG +I + +G
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWG 353
>gi|341900388|gb|EGT56323.1| CBN-TIAR-1 protein [Caenorhabditis brenneri]
Length = 399
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 69/126 (54%), Gaps = 8/126 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT + + + ++ Y Q+ GD NT+++V
Sbjct: 189 IEQMNGQWLGRRTIRTNWATRKPGDQEKPVHYNEKSYDE-----IYNQTSGD--NTSVYV 241
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G + N+++ED+RQ F+ YG I+ V+I +G FV+F N++ A +A+ ++N +G Q
Sbjct: 242 GNI-ANLSEEDIRQAFASYGRISEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQEVGGQL 300
Query: 121 FRADYG 126
R +G
Sbjct: 301 VRCSWG 306
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 11/109 (10%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFV 96
PGQ P + + +FVG L V ++ LR+ F +G+++ K+ KG GFV
Sbjct: 118 PGQQPSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 177
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADY-----GNQWSGAYYGGQVYD 140
+ RE AE A+ ++NG +G+++ R ++ G+Q +Y + YD
Sbjct: 178 SYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPVHYNEKSYD 226
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC----GFVQFANRENAEEALHKLN 112
T++VG LDP V+++ + F+Q G + K+ + G FV+F++ A +AL +N
Sbjct: 43 TLYVGNLDPTVSEDFVATLFNQIGSVTKTKV-IFDGANDPYAFVEFSDHAQASQALQTMN 101
Query: 113 GTVIGKQSFRADYG 126
++ + + ++
Sbjct: 102 KRLLLDREMKVNWA 115
>gi|62654101|ref|XP_236501.3| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
isoform 2 [Rattus norvegicus]
gi|109485106|ref|XP_001065014.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
isoform 2 [Rattus norvegicus]
Length = 1029
Score = 63.2 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDVPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ASVKI + CGFV F NR +AE AL LNG +I + +G
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWG 353
>gi|410355679|gb|JAA44443.1| U2 snRNP-associated SURP domain containing [Pan troglodytes]
Length = 1033
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 246 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 303
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ASVKI + CGFV F NR +AE AL LNG +I + +G
Sbjct: 304 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWG 357
>gi|395832941|ref|XP_003789509.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein
[Otolemur garnettii]
Length = 1027
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 240 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 297
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ASVKI + CGFV F NR +AE AL LNG +I + +G
Sbjct: 298 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWG 351
>gi|351694957|gb|EHA97875.1| U2-associated protein SR140 [Heterocephalus glaber]
Length = 1029
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ASVKI + CGFV F NR +AE AL LNG +I + +G
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWG 353
>gi|326925891|ref|XP_003209141.1| PREDICTED: u2-associated protein SR140-like [Meleagris gallopavo]
Length = 1036
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 248 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 305
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ASVKI + CGFV F NR +AE AL LNG +I + +G
Sbjct: 306 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWG 359
>gi|296227904|ref|XP_002759567.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein
[Callithrix jacchus]
Length = 1029
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ASVKI + CGFV F NR +AE AL LNG +I + +G
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWG 353
>gi|119599363|gb|EAW78957.1| hCG27481, isoform CRA_c [Homo sapiens]
Length = 1029
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ASVKI + CGFV F NR +AE AL LNG +I + +G
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWG 353
>gi|410227838|gb|JAA11138.1| U2 snRNP-associated SURP domain containing [Pan troglodytes]
Length = 1034
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 247 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 304
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ASVKI + CGFV F NR +AE AL LNG +I + +G
Sbjct: 305 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWG 358
>gi|335299677|ref|XP_003358644.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein [Sus
scrofa]
Length = 1029
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ASVKI + CGFV F NR +AE AL LNG +I + +G
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWG 353
>gi|291399919|ref|XP_002716620.1| PREDICTED: U2-associated SR140 protein [Oryctolagus cuniculus]
Length = 1029
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ASVKI + CGFV F NR +AE AL LNG +I + +G
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWG 353
>gi|122937227|ref|NP_001073884.1| U2 snRNP-associated SURP motif-containing protein [Homo sapiens]
gi|301762984|ref|XP_002916912.1| PREDICTED: u2-associated protein SR140-like [Ailuropoda
melanoleuca]
gi|397512450|ref|XP_003826558.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein [Pan
paniscus]
gi|402861319|ref|XP_003895045.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein [Papio
anubis]
gi|403278804|ref|XP_003930975.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein
[Saimiri boliviensis boliviensis]
gi|147668553|sp|O15042.2|SR140_HUMAN RecName: Full=U2 snRNP-associated SURP motif-containing protein;
AltName: Full=140 kDa Ser/Arg-rich domain protein;
AltName: Full=U2-associated protein SR140
gi|168267304|dbj|BAG09708.1| U2-associated protein SR140 [synthetic construct]
gi|387273401|gb|AFJ70195.1| U2 snRNP-associated SURP motif-containing protein [Macaca mulatta]
Length = 1029
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ASVKI + CGFV F NR +AE AL LNG +I + +G
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWG 353
>gi|302800509|ref|XP_002982012.1| hypothetical protein SELMODRAFT_154896 [Selaginella moellendorffii]
gi|300150454|gb|EFJ17105.1| hypothetical protein SELMODRAFT_154896 [Selaginella moellendorffii]
Length = 398
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 63/119 (52%), Gaps = 24/119 (20%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA---- 107
D++ T++VGGLD VT EDL+ F YGEI S+++ + C F+ + RE+AE+A
Sbjct: 220 DTTVRTLYVGGLDERVTTEDLKDNFYSYGEIESLRLVPQRACAFITYTTREDAEKAAEDL 279
Query: 108 LHKL--NGTVI----GK-QSFRADY----------GNQWSGAYYGGQVYDGYGYAIPPP 149
HKL NG + GK Q+ ++D N+ GA + DG Y +PPP
Sbjct: 280 AHKLVVNGVRLKLMWGKPQAAKSDLSSGGGAQEEQSNEDGGA---AEQDDGVAYYLPPP 335
>gi|410355677|gb|JAA44442.1| U2 snRNP-associated SURP domain containing [Pan troglodytes]
Length = 1028
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 241 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 298
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ASVKI + CGFV F NR +AE AL LNG +I + +G
Sbjct: 299 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWG 352
>gi|332232395|ref|XP_003265391.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein
[Nomascus leucogenys]
Length = 1029
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ASVKI + CGFV F NR +AE AL LNG +I + +G
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWG 353
>gi|198461072|ref|XP_001361904.2| GA21718 [Drosophila pseudoobscura pseudoobscura]
gi|198137226|gb|EAL26483.2| GA21718 [Drosophila pseudoobscura pseudoobscura]
Length = 956
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 38 ASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------P 88
A++ A G GD + T +++G L+P ++++ L + F +YG +AS+KI
Sbjct: 195 AASNAREVGSFDTGDPNTTNLYLGNLNPKISEQQLMETFGRYGPLASIKIMWPRSDEEKA 254
Query: 89 VGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
G+ CGFV + +R +AE AL LNG I R +G
Sbjct: 255 RGRNCGFVAYMSRRDAERALRTLNGRYIMGYEMRLGWG 292
>gi|195445204|ref|XP_002070221.1| GK11939 [Drosophila willistoni]
gi|194166306|gb|EDW81207.1| GK11939 [Drosophila willistoni]
Length = 469
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 7/93 (7%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 95
+PG P+++ SS+ IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 82 SPGNQPKTD-ISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAF 140
Query: 96 VQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
V F + AE A+ +NG IG +S R ++ +
Sbjct: 141 VSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTR 173
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 54 SNTTIFVGGLDPNVTDEDL-RQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
+NTT++ GG PNV +DL + F Q+G I V++ KG F++F +E A A+ +
Sbjct: 220 TNTTVYCGGFPPNVISDDLMHKHFMQFGPIQDVRVFKEKGFAFIKFVTKEAAARAIEHTH 279
Query: 113 GTVIGKQSFRADYGNQ 128
+ + + +G +
Sbjct: 280 ISEVHGSQVKCFWGKE 295
>gi|2224605|dbj|BAA20790.1| KIAA0332 [Homo sapiens]
gi|23336900|tpg|DAA00075.1| TPA_exp: U2-associated SR140 protein [Homo sapiens]
Length = 1028
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 241 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 298
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ASVKI + CGFV F NR +AE AL LNG +I + +G
Sbjct: 299 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWG 352
>gi|393907830|gb|EFO21360.2| hypothetical protein LOAG_07126 [Loa loa]
Length = 317
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 62/125 (49%), Gaps = 18/125 (14%)
Query: 47 PQSEGDSSNTT----IFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFV 96
P+S+ NT +FVG L V L+ F +GEI+ K+ K GFV
Sbjct: 118 PRSQSPKVNTNKNFHVFVGDLATEVDSCTLKAAFESFGEISEAKVIRDPQTLKSKSYGFV 177
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYA 156
FA +ENAE+A+ K+NG +IG++ R + W+ + G G YA+ PP +++
Sbjct: 178 SFAVKENAEKAIEKMNGQMIGRRPIRTN----WAVRRFDG----GEEYAMKPPTYDNIFN 229
Query: 157 AAAAA 161
A A
Sbjct: 230 ATHAT 234
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 8/126 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG RP+R A R G + YA + ++NT+++V
Sbjct: 189 IEKMNGQMIGRRPIRTNWAVRRFDGGEE--------YAMKPPTYDNIFNATHATNTSVYV 240
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ P TDE+L QPFS + V++ +G FV++ ++ A A+ ++G I Q
Sbjct: 241 GGISPATTDEELMQPFSAIATVTEVRLFKQQGYAFVRYLTKDAATRAIMFMHGKEINGQK 300
Query: 121 FRADYG 126
+ +
Sbjct: 301 IKCSWS 306
>gi|345789304|ref|XP_534297.3| PREDICTED: U2 snRNP-associated SURP motif-containing protein [Canis
lupus familiaris]
Length = 1029
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ASVKI + CGFV F NR +AE AL LNG +I + +G
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWG 353
>gi|348503420|ref|XP_003439262.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein
[Oreochromis niloticus]
Length = 972
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD S T +++G ++P + +E L Q F +YG +ASVKI + CGFV
Sbjct: 200 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERARERNCGFV 259
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADYG 126
F NR +AE AL LNG +I + +G
Sbjct: 260 AFMNRRDAERALKNLNGKMIMNFEMKLGWG 289
>gi|354466181|ref|XP_003495553.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
[Cricetulus griseus]
Length = 919
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDVPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ASVKI + CGFV F NR +AE AL LNG +I + +G
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWG 353
>gi|125775095|ref|XP_001358799.1| GA18869 [Drosophila pseudoobscura pseudoobscura]
gi|195144954|ref|XP_002013461.1| GL24152 [Drosophila persimilis]
gi|54638540|gb|EAL27942.1| GA18869 [Drosophila pseudoobscura pseudoobscura]
gi|194102404|gb|EDW24447.1| GL24152 [Drosophila persimilis]
Length = 464
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 7/93 (7%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 95
+PG P+++ SS+ IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 82 SPGNQPKTD-ISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAF 140
Query: 96 VQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
V F + AE A+ +NG IG +S R ++ +
Sbjct: 141 VSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTR 173
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 14/139 (10%)
Query: 4 MNGVYCSSRPMRIGAAT-----PRKSSGYQQQYSSQGGYASNGAPGQGPQ--------SE 50
MNG + SR +R +T PR+SS GG NG + Q ++
Sbjct: 156 MNGQWIGSRSIRTNWSTRKLPPPRESSKGGGLGGGMGGGPGNGGGVKSNQRHTFDEVYNQ 215
Query: 51 GDSSNTTIFVGGLDPNVTDEDL-RQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 109
+NTT++ GG PNV +DL + F Q+G I V++ KG F++F +++A A+
Sbjct: 216 SSPTNTTVYCGGFPPNVISDDLMHKHFGQFGPIQDVRVFKDKGFAFIKFVTKDSAAHAIE 275
Query: 110 KLNGTVIGKQSFRADYGNQ 128
+ T + + +G +
Sbjct: 276 HTHNTEVHGNLVKCFWGKE 294
>gi|344301504|gb|EGW31816.1| hypothetical protein SPAPADRAFT_56576 [Spathaspora passalidarum
NRRL Y-27907]
Length = 632
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 47/79 (59%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
Q D +NTT+FVGGL V++ L F +G I VKIP GK CGFV++ RE AEEA
Sbjct: 380 QPYADPTNTTVFVGGLSSEVSEPTLFTLFKPFGIIQQVKIPPGKNCGFVKYTTREEAEEA 439
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ + G +IG R +G
Sbjct: 440 IAAMQGFIIGGNRVRLSWG 458
>gi|312080690|ref|XP_003142708.1| hypothetical protein LOAG_07126 [Loa loa]
Length = 366
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 62/125 (49%), Gaps = 18/125 (14%)
Query: 47 PQSEGDSSNTT----IFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFV 96
P+S+ NT +FVG L V L+ F +GEI+ K+ K GFV
Sbjct: 118 PRSQSPKVNTNKNFHVFVGDLATEVDSCTLKAAFESFGEISEAKVIRDPQTLKSKSYGFV 177
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYA 156
FA +ENAE+A+ K+NG +IG++ R + W+ + G G YA+ PP +++
Sbjct: 178 SFAVKENAEKAIEKMNGQMIGRRPIRTN----WAVRRFDG----GEEYAMKPPTYDNIFN 229
Query: 157 AAAAA 161
A A
Sbjct: 230 ATHAT 234
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 8/126 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG RP+R A R G + YA + ++NT+++V
Sbjct: 189 IEKMNGQMIGRRPIRTNWAVRRFDGGEE--------YAMKPPTYDNIFNATHATNTSVYV 240
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ P TDE+L QPFS + V++ +G FV++ ++ A A+ ++G I Q
Sbjct: 241 GGISPATTDEELMQPFSAIATVTEVRLFKQQGYAFVRYLTKDAATRAIMFMHGKEINGQK 300
Query: 121 FRADYG 126
+ +
Sbjct: 301 IKCSWS 306
>gi|344288968|ref|XP_003416218.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein
[Loxodonta africana]
Length = 1029
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ASVKI + CGFV F NR +AE AL LNG +I + +G
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWG 353
>gi|149729916|ref|XP_001493107.1| PREDICTED: u2 snRNP-associated SURP motif-containing protein [Equus
caballus]
Length = 1029
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ASVKI + CGFV F NR +AE AL LNG +I + +G
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWG 353
>gi|114589671|ref|XP_516796.2| PREDICTED: U2 snRNP-associated SURP motif-containing protein [Pan
troglodytes]
gi|410227836|gb|JAA11137.1| U2 snRNP-associated SURP domain containing [Pan troglodytes]
Length = 1029
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ASVKI + CGFV F NR +AE AL LNG +I + +G
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWG 353
>gi|76608208|ref|XP_877060.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein
isoform 6 [Bos taurus]
gi|297471247|ref|XP_002685082.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein [Bos
taurus]
gi|296491010|tpg|DAA33108.1| TPA: U2-associated SR140 protein [Bos taurus]
Length = 1029
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ASVKI + CGFV F NR +AE AL LNG +I + +G
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWG 353
>gi|426342412|ref|XP_004037839.1| PREDICTED: LOW QUALITY PROTEIN: U2 snRNP-associated SURP
motif-containing protein [Gorilla gorilla gorilla]
Length = 1037
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ASVKI + CGFV F NR +AE AL LNG +I + +G
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWG 353
>gi|426218190|ref|XP_004003332.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein [Ovis
aries]
Length = 1029
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ASVKI + CGFV F NR +AE AL LNG +I + +G
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWG 353
>gi|417405635|gb|JAA49525.1| Putative splicing regulator [Desmodus rotundus]
Length = 1029
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ASVKI + CGFV F NR +AE AL LNG +I + +G
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWG 353
>gi|297286711|ref|XP_001107114.2| PREDICTED: u2-associated protein SR140-like [Macaca mulatta]
Length = 1029
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ASVKI + CGFV F NR +AE AL LNG +I + +G
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWG 353
>gi|440800622|gb|ELR21658.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 229
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEALHKLNGT 114
+F+G L VT+E LRQ F+ YG I + I P CGFV++ NRE AE+A+ LNG
Sbjct: 103 LFIGKLPTTVTEELLRQIFAPYGNIEKLNILKGPADVNCGFVKYDNREEAEKAIRALNGK 162
Query: 115 VIG 117
V+G
Sbjct: 163 VVG 165
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 47 PQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFA 99
P +G+ + +FVG + NV + +R FS YGEI + I + KGCGFV ++
Sbjct: 2 PDQQGECAKPWKLFVGQVPKNVQEATIRSFFSPYGEIVHMNILRDRFTQISKGCGFVSYS 61
Query: 100 NRENAEEALHKLNGTV 115
+E A++A+ L+ V
Sbjct: 62 TKEAADKAISALHSVV 77
>gi|47223423|emb|CAG04284.1| unnamed protein product [Tetraodon nigroviridis]
Length = 964
Score = 62.8 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD S T +++G ++P + +E L Q F +YG +ASVKI + CGFV
Sbjct: 185 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERARERNCGFV 244
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADYG 126
F NR +AE AL LNG +I + +G
Sbjct: 245 AFMNRRDAERALKHLNGKMIMNFEMKLGWG 274
>gi|440911806|gb|ELR61439.1| U2-associated protein SR140 [Bos grunniens mutus]
Length = 1035
Score = 62.8 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ASVKI + CGFV F NR +AE AL LNG +I + +G
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWG 353
>gi|432119575|gb|ELK38536.1| U2 snRNP-associated SURP motif-containing protein [Myotis davidii]
Length = 1052
Score = 62.8 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 264 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 321
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ASVKI + CGFV F NR +AE AL LNG +I + +G
Sbjct: 322 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWG 375
>gi|391332510|ref|XP_003740677.1| PREDICTED: nucleolysin TIAR-like [Metaseiulus occidentalis]
Length = 341
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 9/134 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQS------EGDSS 54
+ MNG + R +R AT R +S Q Q G N P P + + +
Sbjct: 106 INAMNGQWLGGRVIRTNWATRRPASNANNQ---QEGSQGNSTPKYTPLTFDEVYNQASPT 162
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GGL +++E +++ FS YG I +++ KG FV+FA +E+A A+ ++ T
Sbjct: 163 NCTVYCGGLGQGLSEELIQKTFSSYGIIQEIRVFKDKGYAFVRFATKESATHAIVAVHNT 222
Query: 115 VIGKQSFRADYGNQ 128
+ Q + +G +
Sbjct: 223 DVNGQIVKCSWGKE 236
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 6/77 (7%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEALHKL 111
IFVG L +V + LR+ F+ +GEI+ ++ KG GFV F +++AE A++ +
Sbjct: 50 IFVGDLSSDVETQQLREAFTPFGEISDCRVVRDPQTQKSKGYGFVSFLRKQDAETAINAM 109
Query: 112 NGTVIGKQSFRADYGNQ 128
NG +G + R ++ +
Sbjct: 110 NGQWLGGRVIRTNWATR 126
>gi|170058302|ref|XP_001864863.1| U2-associated SR140 protein [Culex quinquefasciatus]
gi|167877443|gb|EDS40826.1| U2-associated SR140 protein [Culex quinquefasciatus]
Length = 603
Score = 62.8 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 61/138 (44%), Gaps = 12/138 (8%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD + T +++G L+P ++++ L + F +YG +AS+KI G+ CGFV
Sbjct: 174 GSFDNGDPNTTNLYLGNLNPKISEQALMELFGKYGPLASIKIMWPRSEEERARGRNCGFV 233
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADYGNQ---WSGAYYGGQVYDGYGYAIPPPNDPS 153
+ +R +AE AL LNG + + +G + Y + Y PP P
Sbjct: 234 AYMSRRDAERALRALNGKDVMNYEMKLGWGKSVPIMTHPIYIPPILVAYTLPPPPSGLPF 293
Query: 154 MYAAAAAAYGAYPVYGSH 171
A A P SH
Sbjct: 294 NAQAHPADLDNIPKMTSH 311
>gi|194881758|ref|XP_001974988.1| GG22076 [Drosophila erecta]
gi|190658175|gb|EDV55388.1| GG22076 [Drosophila erecta]
Length = 960
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 9/96 (9%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVG 90
N + G GD + T +++G L+P ++++ L + F +YG +AS+KI G
Sbjct: 199 NSSKESGSFDTGDPNTTNLYLGNLNPKISEQQLMEIFGRYGPLASIKIMWPRSEEEKQRG 258
Query: 91 KGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ CGFV + +R++AE AL LNG I R +G
Sbjct: 259 RNCGFVAYMSRKDAERALRTLNGRYIMGYEMRLGWG 294
>gi|356561166|ref|XP_003548856.1| PREDICTED: uncharacterized protein LOC100819035 [Glycine max]
Length = 953
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 6/65 (9%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 111
IFVGGLD + T+EDLR+ F + GEI V++ KG FV+FAN+ENA++AL ++
Sbjct: 460 IFVGGLDRDATEEDLRKVFQRIGEIVEVRLHKNSSTNKNKGYAFVKFANKENAKKALSEM 519
Query: 112 NGTVI 116
VI
Sbjct: 520 KNPVI 524
Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 10/95 (10%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFV 96
P P E + ++F+ GL P+ ++ +R+ F YGEI + + K GFV
Sbjct: 623 PIHEPDPEIMAQVKSVFINGLPPHWDEDHVRELFKAYGEIVRIVLARNMSSAKRKDYGFV 682
Query: 97 QFANRENAEEALHKLNGTVIG----KQSFRADYGN 127
F+ E A + +N + +G K RA N
Sbjct: 683 DFSTHEAAVACVDGVNKSELGDGASKIKVRARLSN 717
>gi|432928337|ref|XP_004081149.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
[Oryzias latipes]
Length = 970
Score = 62.4 bits (150), Expect = 7e-08, Method: Composition-based stats.
Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD S T +++G ++P + +E L Q F +YG +ASVKI + CGFV
Sbjct: 200 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERARERNCGFV 259
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADYG 126
F NR +AE AL LNG +I + +G
Sbjct: 260 AFMNRRDAERALKHLNGKMIMNFEMKLGWG 289
>gi|281208502|gb|EFA82678.1| hypothetical protein PPL_04372 [Polysphondylium pallidum PN500]
Length = 918
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
+S + I++G + N+ ++++R+ +YGEI SV+I K C FV F N NA AL L
Sbjct: 683 NSLSRAIYIGNVSDNLPEKEIRKECEKYGEIESVRILRKKACAFVNFMNIPNATVALQAL 742
Query: 112 NGTVIGKQSFRADYG 126
NG +G R +YG
Sbjct: 743 NGKKLGDTIVRVNYG 757
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 44 GQGPQSEGDSS---NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
G P EG+S + ++VG + +V++E+L+ F YGE+ SV+I + C FV F +
Sbjct: 573 GVDPIMEGNSDEQPSRILWVGNIGMDVSEEELKSEFGVYGELESVRILHDRFCAFVNFKD 632
Query: 101 RENAEEALHKLNGTVIGKQSFRADYGNQWSGAYY 134
NA A ++ V+G Q ++ + S +
Sbjct: 633 AINAANAKRNMHNQVLGSQFIVVNFRHPKSDEMF 666
>gi|393909208|gb|EFO19127.2| hypothetical protein LOAG_09365 [Loa loa]
Length = 421
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 71/143 (49%), Gaps = 10/143 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT RK +G + G Y ++ NT+++V
Sbjct: 220 IEQMNGQWLGRRTIRTNWAT-RKPTGTG---AGDGQYGRTELNYDDVYNQTGPDNTSVYV 275
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G ++ + DEDLR F ++G I V+I +G FV+F +++A A+ K+NG + Q+
Sbjct: 276 GNVNSSANDEDLRAAFDKFGRILEVRIFKSQGYAFVRFDKKDSACNAICKMNGQELCGQN 335
Query: 121 FRADYG------NQWSGAYYGGQ 137
+ +G NQ + AY Q
Sbjct: 336 IKCSWGRTPEGHNQQANAYNQAQ 358
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 55/96 (57%), Gaps = 7/96 (7%)
Query: 40 NGAPGQGPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKG 92
N A G Q++ D+S + +FVG L P V ++ L+ F+ +GE++ K+ KG
Sbjct: 145 NWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAFAPFGEVSDAKVIRDATTLKSKG 204
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV + RE AE A+ ++NG +G+++ R ++ +
Sbjct: 205 YGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATR 240
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC----GFVQFANRENAEEALHKLN 112
T++VG LDP++T++ + F Q G + K+ + G FV+FA+ A +AL +N
Sbjct: 75 TVYVGNLDPSITEDFITTLFGQIGAVTKTKV-IFDGTNDPYAFVEFADHYTAAQALQAMN 133
Query: 113 GTVIGKQSFRADYGNQ 128
V+ ++ + ++ +
Sbjct: 134 KRVLLEKEMKVNWATE 149
>gi|449550716|gb|EMD41680.1| hypothetical protein CERSUDRAFT_110250 [Ceriporiopsis subvermispora
B]
Length = 448
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 54/91 (59%), Gaps = 7/91 (7%)
Query: 45 QGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQ 97
QG Q++ D+SN +FVG L P V DE L + FS +G ++ ++ +G GF+
Sbjct: 93 QGQQNKEDTSNHFHVFVGDLSPEVNDEVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLA 152
Query: 98 FANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
F ++ +AE+A+ +NG +G ++ R ++ NQ
Sbjct: 153 FRDKTDAEQAIATMNGEWLGSRAIRVNWANQ 183
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 14/119 (11%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
NTT++VG L P T DL F G ++ +++ +G FV+ E+A A+ +L G
Sbjct: 232 NTTVYVGNLVPYCTQADLIPLFQSIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQ 291
Query: 115 VIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPN-DPSMYAAAAAAYGAYPVYGSHQ 172
++ + + +G + DG G A+P + P+ AAA+ YG P+YG Q
Sbjct: 292 MVHGRPIKCSWGKDRA---------DG-GVALPAGSLSPT---AAASPYGNMPMYGMPQ 337
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-------GKGCGFVQFANRENAEEALHK 110
++VG L P VT+ L + F+ G + VKI G GFV++ + AE AL
Sbjct: 16 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 75
Query: 111 LNGTVIGKQSFRADYGNQ 128
LNG I R ++ Q
Sbjct: 76 LNGRKIFDTEIRVNWAYQ 93
>gi|312086091|ref|XP_003144941.1| hypothetical protein LOAG_09365 [Loa loa]
Length = 394
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 71/143 (49%), Gaps = 10/143 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT RK +G + G Y ++ NT+++V
Sbjct: 193 IEQMNGQWLGRRTIRTNWAT-RKPTGTG---AGDGQYGRTELNYDDVYNQTGPDNTSVYV 248
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G ++ + DEDLR F ++G I V+I +G FV+F +++A A+ K+NG + Q+
Sbjct: 249 GNVNSSANDEDLRAAFDKFGRILEVRIFKSQGYAFVRFDKKDSACNAICKMNGQELCGQN 308
Query: 121 FRADYG------NQWSGAYYGGQ 137
+ +G NQ + AY Q
Sbjct: 309 IKCSWGRTPEGHNQQANAYNQAQ 331
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 55/96 (57%), Gaps = 7/96 (7%)
Query: 40 NGAPGQGPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKG 92
N A G Q++ D+S + +FVG L P V ++ L+ F+ +GE++ K+ KG
Sbjct: 118 NWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAFAPFGEVSDAKVIRDATTLKSKG 177
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV + RE AE A+ ++NG +G+++ R ++ +
Sbjct: 178 YGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATR 213
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC----GFVQFANRENAEEALHKLN 112
T++VG LDP++T++ + F Q G + K+ + G FV+FA+ A +AL +N
Sbjct: 48 TVYVGNLDPSITEDFITTLFGQIGAVTKTKV-IFDGTNDPYAFVEFADHYTAAQALQAMN 106
Query: 113 GTVIGKQSFRADYGNQ 128
V+ ++ + ++ +
Sbjct: 107 KRVLLEKEMKVNWATE 122
>gi|393248198|gb|EJD55705.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 426
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 45 QGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQ 97
QG Q++ D+SN +FVG L P V+DE L + FS +G ++ ++ +G GF+
Sbjct: 85 QGSQNKEDTSNHFHVFVGDLSPEVSDEVLGKAFSAFGTLSDARVMWDMNSGKSRGYGFLA 144
Query: 98 FANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
F ++ +AE+A+ +NG +G ++ R ++ NQ
Sbjct: 145 FRDKTDAEQAIATMNGEWLGSRAIRVNWANQ 175
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 59/139 (42%), Gaps = 20/139 (14%)
Query: 40 NGAPGQGPQS------EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
N APG GP S + + NTT++VG L P T DL F G I+ +++ +G
Sbjct: 223 NFAPGGGPLSFEQVVAQTPAYNTTVYVGNLVPYTTQADLIPLFQGIGYISEIRMQADRGF 282
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPS 153
FV+ E+A A+ +L G ++ + + +G + G P P
Sbjct: 283 AFVKLDTHEHAALAIVQLQGQLVHGRPIKCSWGKDRASGETGTM----------SPTSP- 331
Query: 154 MYAAAAAAYGAYPVYGSHQ 172
A YG P+YG Q
Sbjct: 332 ---AGVTPYGNMPLYGMPQ 347
Score = 42.7 bits (99), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-------GKGCGFVQFANRENAEEALHK 110
++VG L P VT+ L + F+ G + VKI G GFV++ + AE AL
Sbjct: 8 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 67
Query: 111 LNGTVIGKQSFRADYGNQ 128
LNG I R ++ Q
Sbjct: 68 LNGRKIFDTEIRVNWAYQ 85
>gi|406878247|gb|EKD27207.1| hypothetical protein ACD_79C00808G0004 [uncultured bacterium]
Length = 86
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
+ ++VGGL + T E L+ FS+YGE+ +VKI GKG GF++ + + +AE A +LNG +
Sbjct: 4 SKLYVGGLRYSTTVEKLKNLFSEYGEVKNVKIVGGKGIGFIEMSKQSDAESAKKELNGYI 63
Query: 116 IGKQSFRAD 124
Q R D
Sbjct: 64 FDGQEIRVD 72
>gi|242021493|ref|XP_002431179.1| nucleolysin TIA-1, putative [Pediculus humanus corporis]
gi|212516428|gb|EEB18441.1| nucleolysin TIA-1, putative [Pediculus humanus corporis]
Length = 403
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 95
+PG P+ + SS+ IFVG L P + LR+ F+ +GEI++ +I KG F
Sbjct: 85 SPGNQPKQD-TSSHHHIFVGDLSPEIEMHTLREAFAPFGEISNCRIVRDPQTLKSKGYAF 143
Query: 96 VQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
V F + AE A+H +NG +G +S R ++ +
Sbjct: 144 VSFVKKAEAESAIHAMNGQWLGNRSIRTNWSTR 176
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 83/203 (40%), Gaps = 43/203 (21%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGL 63
MNG + +R +R +T RK + + S QG + + ++ +N T++ GG
Sbjct: 159 MNGQWLGNRSIRTNWST-RKPPPPRTERSRQGN--AKAVSYEEVYNQSSPTNCTVYCGGF 215
Query: 64 DPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRA 123
+ ++ + + FS++G I ++ KG F++F+ +E A A+ ++ I Q +
Sbjct: 216 TNGINEDLIEKAFSRFGTIQDIRSFKDKGYAFIRFSTKEAATHAIEAMHNAEINGQQVKC 275
Query: 124 DYGNQWS------------------------GAYYGGQVYDGYGYAIPPPN--DPSMYAA 157
+G + S A+Y Q Y GY PP P + AA
Sbjct: 276 FWGKESSDPATAQNAQQPQQVQQSGSSVAAANAHYPYQTYTEVGYWYPPGTYQAPPVTAA 335
Query: 158 A--------------AAAYGAYP 166
A AAAYG +P
Sbjct: 336 AQMPGQYLQGVQPHYAAAYGQFP 358
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEALHKLNG 113
T++VG LD +VT++ L FSQ G + KI P FV+F N + A AL +N
Sbjct: 11 TLYVGNLDVSVTEDLLCTLFSQIGSVKGCKIIREPNNDPYAFVEFVNHQAASTALIAMNK 70
Query: 114 TVIGKQSFRADY----GNQ 128
+ ++ + ++ GNQ
Sbjct: 71 RHVLEKEIKVNWATSPGNQ 89
>gi|195110141|ref|XP_001999640.1| GI22960 [Drosophila mojavensis]
gi|193916234|gb|EDW15101.1| GI22960 [Drosophila mojavensis]
Length = 475
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 7/93 (7%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 95
+PG P+++ SS+ IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 82 SPGNTPKTD-ISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAF 140
Query: 96 VQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
V F + AE A+ +NG IG ++ R ++ +
Sbjct: 141 VSFVKKAEAENAIQSMNGQWIGSRNIRTNWSTR 173
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 54 SNTTIFVGGLDPNV-TDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
+NTT++ GG PNV +DE + + F Q+G I V++ KG F++F +E A A+ +
Sbjct: 222 TNTTVYCGGFPPNVISDELMHKHFMQFGPIQDVRVFKDKGFAFIKFVTKEAAARAIEHTH 281
Query: 113 GTVIGKQSFRADYGNQ 128
+ + + +G +
Sbjct: 282 NSEVHGNHVKCFWGKE 297
>gi|294884882|gb|ADF47449.1| TIA1-like protein [Dugesia japonica]
Length = 383
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 7/92 (7%)
Query: 42 APGQGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCG 94
AP ++ D+SN IFVG + P + + LR+ FS +G + KI KG G
Sbjct: 98 APINNISTQEDTSNHYHIFVGDIAPEIETQFLRERFSLFGRVTECKIIKDMHTQKPKGYG 157
Query: 95 FVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
FV +A +E AEEAL+K+NG +G + R ++
Sbjct: 158 FVAYATKEEAEEALNKMNGKFLGTRQIRTNWA 189
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 26/137 (18%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR---------KSSGYQQQYSSQGGYASNGAPGQGPQSEG 51
+ +MNG + +R +R A R K Y + +++
Sbjct: 171 LNKMNGKFLGTRQIRTNWAIRRPPQPPGKDQKPLDYNEVFAA-----------------S 213
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
SN TI+VGG+ + +E LR+ F ++G+I V+I KG FV+F + E A +A+ ++
Sbjct: 214 SESNCTIYVGGITNGLCEELLRESFKEFGDILEVRIFKEKGYAFVRFDSHEGATQAIIRM 273
Query: 112 NGTVIGKQSFRADYGNQ 128
+G +G Q + +G +
Sbjct: 274 HGKEVGSQLCKCSWGKE 290
>gi|195170236|ref|XP_002025919.1| GL10142 [Drosophila persimilis]
gi|194110783|gb|EDW32826.1| GL10142 [Drosophila persimilis]
Length = 956
Score = 62.0 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD + T +++G L+P ++++ L + F +YG +AS+KI G+ CGFV
Sbjct: 203 GSFDTGDPNTTNLYLGNLNPKISEQQLMETFGRYGPLASIKIMWPRSDEEKARGRNCGFV 262
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ +R +AE AL LNG I R +G
Sbjct: 263 AYMSRRDAERALRTLNGRYIMGYEMRLGWG 292
>gi|149018881|gb|EDL77522.1| rCG25679, isoform CRA_c [Rattus norvegicus]
Length = 784
Score = 62.0 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD S T +++G ++P + +E L Q F ++G +ASVKI + CGFV
Sbjct: 19 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFV 78
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADYG 126
F NR +AE AL LNG +I + +G
Sbjct: 79 AFMNRRDAERALKNLNGKMIMSFEMKLGWG 108
>gi|196010826|ref|XP_002115277.1| hypothetical protein TRIADDRAFT_64182 [Trichoplax adhaerens]
gi|190582048|gb|EDV22122.1| hypothetical protein TRIADDRAFT_64182 [Trichoplax adhaerens]
Length = 432
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%)
Query: 23 KSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEI 82
KSS Q + G + Q +G ++ IF+GGL P +++++LR FS +GE+
Sbjct: 284 KSSRSNQHHKEDGQSQRSNNFRNSSQRDGQQTDYQIFIGGLTPEISEKELRNEFSVFGEV 343
Query: 83 ASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGK 118
+K KG GFV F N E+ + AL +GK
Sbjct: 344 KHIKTNTSKGFGFVSFENEESVKRALTTELKIFVGK 379
>gi|41055734|ref|NP_956476.1| TIA1 cytotoxic granule-associated RNA binding protein 1 [Danio
rerio]
gi|28277744|gb|AAH45485.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
gi|44890544|gb|AAH66734.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
Length = 342
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 68/128 (53%), Gaps = 4/128 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT RK S + S+ G +S + ++ SN T++
Sbjct: 155 IQQMNGQWLGGRQIRTNWAT-RKPSAPK---SNNEGASSKHLSYEEVLNQSSPSNCTVYC 210
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ ++D+ +RQ FS +G+I +++ KG FV+F + E A A+ +NGT I +
Sbjct: 211 GGIASGLSDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFDSHEGAAHAIVSVNGTCIEGHT 270
Query: 121 FRADYGNQ 128
+ +G +
Sbjct: 271 VKCYWGKE 278
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P ++ +D+R F+ +G+I+ ++ KG
Sbjct: 81 NWASTPSSQKKDTSNHFHVFVGDLSPEISTDDVRAAFAPFGKISDARVVKDLATGKSKGY 140
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GF+ F N+ +AE A+ ++NG +G + R ++ +
Sbjct: 141 GFISFINKWDAESAIQQMNGQWLGGRQIRTNWATR 175
>gi|37681959|gb|AAQ97857.1| TIA1 cytotoxic granule-associated RNA binding protein [Danio rerio]
gi|160773363|gb|AAI55270.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
Length = 342
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 68/128 (53%), Gaps = 4/128 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT RK S + S+ G +S + ++ SN T++
Sbjct: 155 IQQMNGQWLGGRQIRTNWAT-RKPSAPK---SNNEGASSKHLSYEEVLNQSSPSNCTVYC 210
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ ++D+ +RQ FS +G+I +++ KG FV+F + E A A+ +NGT I +
Sbjct: 211 GGIASGLSDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFDSHEGAAHAIVSVNGTCIEGHT 270
Query: 121 FRADYGNQ 128
+ +G +
Sbjct: 271 VKCYWGKE 278
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P ++ +D+R F+ +G+I+ ++ KG
Sbjct: 81 NWASTPSSQKKDTSNHFHVFVGDLSPEISTDDVRAAFAPFGKISDARVVRDLATGKSKGY 140
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GF+ F N+ +AE A+ ++NG +G + R ++ +
Sbjct: 141 GFISFINKWDAESAIQQMNGQWLGGRQIRTNWATR 175
>gi|170589631|ref|XP_001899577.1| RNA recognition motif. [Brugia malayi]
gi|158593790|gb|EDP32385.1| RNA recognition motif [Brugia malayi]
Length = 287
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 12/126 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ EMNG R +R A RK G ++ + + + A +NT+++V
Sbjct: 164 IEEMNGQMIGRRQIRTNWAV-RKFDGGEENVTYDNIFNATHA-----------ANTSVYV 211
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ P TDE+L Q FS + V++ +G FV++ N++ A A+ +NG VI Q
Sbjct: 212 GGISPITTDEELMQSFSAIATVIEVRLFKQQGYAFVRYLNKDAAARAIMSMNGKVINGQK 271
Query: 121 FRADYG 126
R +
Sbjct: 272 IRCSWS 277
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 27/115 (23%)
Query: 39 SNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASV-----KIPV---- 89
+N P S N +FVG L V + L+ F +GEI+SV +P+
Sbjct: 68 ANVRPRSHSPKVDTSKNYHVFVGDLSTEVNNCTLKAAFESFGEISSVFRPSYNLPLYTLA 127
Query: 90 ------------------GKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
KG GFV F +ENA++A+ ++NG +IG++ R ++
Sbjct: 128 SLSCFSEAKVIRDPQTLKSKGYGFVSFPVKENAQKAIEEMNGQMIGRRQIRTNWA 182
>gi|392571669|gb|EIW64841.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 437
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 54/91 (59%), Gaps = 7/91 (7%)
Query: 45 QGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQ 97
QG Q++ D+SN +FVG L P V DE L + FS +G ++ ++ +G GF+
Sbjct: 95 QGQQNKEDTSNHYHVFVGDLSPEVNDEVLGKAFSAFGTLSDARVMWDMNSGKSRGYGFLA 154
Query: 98 FANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
F ++ +AE+A+ +NG +G ++ R ++ NQ
Sbjct: 155 FRDKTDAEQAIATMNGEWLGSRAIRVNWANQ 185
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 43/82 (52%)
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 104
+G ++ + NTT++VG L P T DL F G ++ +++ +G FV+ E+A
Sbjct: 237 EGVVTQTPAYNTTVYVGNLVPYATQADLIPLFQSIGYLSEIRMQSDRGFAFVKLDTHEHA 296
Query: 105 EEALHKLNGTVIGKQSFRADYG 126
A+ +L G ++ + + +G
Sbjct: 297 AMAIVQLQGQLVHGRPIKCSWG 318
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-------GKGCGFVQFANRENAEEALHK 110
++VG L P VT+ L + F+ G + VKI G GFV++ + AE AL
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 77
Query: 111 LNGTVIGKQSFRADYGNQ 128
LNG I R ++ Q
Sbjct: 78 LNGRKIFDTEIRVNWAYQ 95
>gi|345325652|ref|XP_003430942.1| PREDICTED: LOW QUALITY PROTEIN: U2 snRNP-associated SURP
motif-containing protein-like [Ornithorhynchus anatinus]
Length = 1079
Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 342 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 399
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ASVKI + CGFV F NR +AE AL LNG +I + +G
Sbjct: 400 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWG 453
>gi|253723319|pdb|2YTC|A Chain A, Solution Structure Of Rna Binding Domain In Pre-Mrna-
Splicing Factor Rbm22
Length = 85
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 9 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 68
Query: 111 LNGTVIGKQSFRADYG 126
N ++ + +G
Sbjct: 69 FNKLIVNGRRLNVKWG 84
>gi|302808802|ref|XP_002986095.1| hypothetical protein SELMODRAFT_44024 [Selaginella moellendorffii]
gi|300146243|gb|EFJ12914.1| hypothetical protein SELMODRAFT_44024 [Selaginella moellendorffii]
Length = 366
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D++ T++VGGLD VT EDL+ F YGEI S+++ + C F+ + RE+AE+A L
Sbjct: 220 DTTVRTLYVGGLDERVTTEDLKDNFYSYGEIESLRLVPQRACAFITYTTREDAEKAAEDL 279
Query: 112 NGTVI 116
++
Sbjct: 280 AHKLV 284
>gi|170592088|ref|XP_001900801.1| RNA recognition motif. [Brugia malayi]
gi|158591668|gb|EDP30272.1| RNA recognition motif [Brugia malayi]
Length = 421
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 66/126 (52%), Gaps = 4/126 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT RK +G + G Y + ++ NT+++V
Sbjct: 220 IEQMNGQWLGRRTIRTNWAT-RKPTGTG---AGDGQYGRSELNYDDVYNQTGPDNTSVYV 275
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G ++ + DEDLR F ++G I V+I +G FV+F +++A A+ K+NG + Q+
Sbjct: 276 GNVNSSANDEDLRAAFDKFGRILEVRIFKSQGYAFVRFDKKDSACNAICKMNGQELCGQN 335
Query: 121 FRADYG 126
+ +G
Sbjct: 336 IKCSWG 341
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 55/96 (57%), Gaps = 7/96 (7%)
Query: 40 NGAPGQGPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKG 92
N A G Q++ D+S + +FVG L P V ++ L+ F+ +GE++ K+ KG
Sbjct: 145 NWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAFAPFGEVSDAKVIRDATTLKSKG 204
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV + RE AE A+ ++NG +G+++ R ++ +
Sbjct: 205 YGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATR 240
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC----GFVQFANRENAEEALHKLN 112
T++VG LDP++T++ + F Q G + K+ + G FV+FA+ A +AL +N
Sbjct: 75 TVYVGNLDPSITEDFITTLFGQIGAVTKTKV-IFDGTNDPYAFVEFADHYTAAQALQAMN 133
Query: 113 GTVIGKQSFRADYGNQ 128
V+ ++ + ++ +
Sbjct: 134 KRVLLEKEMKVNWATE 149
>gi|443924183|gb|ELU43247.1| polyadenylate-binding protein [Rhizoctonia solani AG-1 IA]
Length = 498
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 54/91 (59%), Gaps = 7/91 (7%)
Query: 45 QGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQ 97
QG Q++ D+SN +FVG L P V DE L + F+ +G ++ ++ +G GF+
Sbjct: 125 QGTQNKEDTSNHYHVFVGDLSPEVNDEVLAKAFAAFGSLSDARVMWDMNSGKSRGYGFLA 184
Query: 98 FANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
F ++ +AE+A+ +NG +G ++ R ++ NQ
Sbjct: 185 FRDKTDAEQAIATMNGEWLGSRAIRVNWANQ 215
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 12/118 (10%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
NTT++VG L P T DL F G ++ +++ +G FV+ ENA A+ +L G
Sbjct: 270 NTTVYVGNLVPYCTQADLIPLFQSIGYLSEIRMQADRGFAFVKLDTHENAAMAIVQLQGQ 329
Query: 115 VIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPVYGSHQ 172
++ + + +G S A G G I P A A AYG P+YG Q
Sbjct: 330 LVHGRPIKCSWGKDRSAADTGAP-----GSMITP-------ATGAGAYGGVPMYGMPQ 375
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-------GKGCGFVQFANRENAEEALHK 110
++VG L P VT+ L + F+ G + VKI G+ GFV++ + AE AL
Sbjct: 48 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGQNYGFVEYMDMRAAETALQT 107
Query: 111 LNGTVIGKQSFRADYGNQ 128
LNG I R ++ Q
Sbjct: 108 LNGRKIFDTEIRVNWAYQ 125
>gi|403416100|emb|CCM02800.1| predicted protein [Fibroporia radiculosa]
Length = 433
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 54/91 (59%), Gaps = 7/91 (7%)
Query: 45 QGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQ 97
QG Q++ D+SN +FVG L P V DE L + FS +G ++ ++ +G GF+
Sbjct: 95 QGQQNKEDTSNHYHVFVGDLSPEVNDEVLGKAFSAFGTLSDARVMWDMNSGKSRGYGFLA 154
Query: 98 FANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
F ++ +AE+A+ +NG +G ++ R ++ NQ
Sbjct: 155 FRDKTDAEQAIATMNGEWLGSRAIRVNWANQ 185
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 75/182 (41%), Gaps = 22/182 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQY----SSQGGYASNGAPGQGPQS------E 50
+ MNG + SR +R+ A + G S GG + GP S +
Sbjct: 165 IATMNGEWLGSRAIRVNWANQKTQGGPSPTMPGRPSGMGGAPAPINFQGGPLSYESVVQQ 224
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK 110
+ NTT++VG L P T DL F G ++ +++ +G FV+ E+A A+ +
Sbjct: 225 TPAYNTTVYVGNLVPYCTQADLIPLFQSIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQ 284
Query: 111 LNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPVYGS 170
L G ++ + + +G + G G P P AAA YG P+YG
Sbjct: 285 LQGQMVHGRPIKCSWGKDRA----DGTAPLSTGSMSPTP--------AAAPYGQLPMYGM 332
Query: 171 HQ 172
Q
Sbjct: 333 PQ 334
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-------GKGCGFVQFANRENAEEALHK 110
++VG L P VT+ L + F+ G + VKI G GFV++ + AE AL
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 77
Query: 111 LNGTVIGKQSFRADYGNQ 128
LNG I R ++ Q
Sbjct: 78 LNGRKIFDTEIRVNWAYQ 95
>gi|82400164|gb|ABB72821.1| RRM-containing RNA-binding protein-like protein [Solanum tuberosum]
Length = 462
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 44 GQGPQSE--GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANR 101
G+ P E D S T++VGG+D ++++DLR F +GEI S+K+ + +GC FV + R
Sbjct: 214 GEMPSLEPPDDESIRTLYVGGVDARISEQDLRDQFYAHGEIESIKMVLQRGCAFVTYTTR 273
Query: 102 ENAEEALHKLNGTVIGK 118
E A +A +L ++ K
Sbjct: 274 EGAVKAAEELANKLVIK 290
>gi|427798579|gb|JAA64741.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 381
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D+S TT++VG L +T++DLR F QYGEI V + + C FVQF NR +AE A K
Sbjct: 228 DTSITTLYVGNLGDRLTEKDLRDHFYQYGEIRGVTMLARQQCAFVQFTNRVSAELAADKT 287
Query: 111 LNGTVIGKQSFRADYG 126
N ++G + +G
Sbjct: 288 FNKLILGGRRLVIKWG 303
>gi|339242463|ref|XP_003377157.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316974060|gb|EFV57598.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 352
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 11/130 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT + G Q Q + A + NTT++V
Sbjct: 154 IEQMNGQWLGRRTIRTNWAT--RKPGLPAQNLGQLTFDDVMA-------QSSPQNTTVYV 204
Query: 61 GGLDPNVT--DEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGK 118
G + N T +DLR+ F+++G I V++ +G FV+F N+E+A A+ + GT I
Sbjct: 205 GSVAANTTGTHDDLRRIFARFGSILEVRVFKQQGYAFVRFDNKESAAHAILNITGTEING 264
Query: 119 QSFRADYGNQ 128
S R +G +
Sbjct: 265 SSVRCSWGKE 274
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 9/131 (6%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGG-------LDPNVTDEDLRQPFSQYGEIASVKIPVGKG 92
N A G Q++ D+S + + L V + L S I ++ KG
Sbjct: 79 NWATSPGTQAKVDTSKKHLLLMEKFRKRPPLHQIVRADSLLFISSDVKVIRDLQTLKSKG 138
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQWSG--AYYGGQVYDGYGYAIPPPN 150
GFV + + ++AE A+ ++NG +G+++ R ++ + G A GQ+ A P
Sbjct: 139 YGFVSYVSHDDAERAIEQMNGQWLGRRTIRTNWATRKPGLPAQNLGQLTFDDVMAQSSPQ 198
Query: 151 DPSMYAAAAAA 161
+ ++Y + AA
Sbjct: 199 NTTVYVGSVAA 209
>gi|194754789|ref|XP_001959677.1| GF11923 [Drosophila ananassae]
gi|190620975|gb|EDV36499.1| GF11923 [Drosophila ananassae]
Length = 963
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 26/127 (20%)
Query: 35 GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------- 87
G ++N A G GD + T +++G L+P ++++ L + F +YG +AS+KI
Sbjct: 201 GSKSANNARDSGSFDTGDPNTTNLYLGNLNPKISEQQLMEIFGRYGPLASIKIMWPRSEE 260
Query: 88 --PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYA 145
G+ CGFV + +R++AE AL LN I G ++ G+G
Sbjct: 261 EKQRGRNCGFVAYMSRKDAERALRALNCRYI-----------------MGNKMQLGWGKT 303
Query: 146 IPPPNDP 152
+P N P
Sbjct: 304 VPITNTP 310
>gi|308493359|ref|XP_003108869.1| hypothetical protein CRE_11982 [Caenorhabditis remanei]
gi|308247426|gb|EFO91378.1| hypothetical protein CRE_11982 [Caenorhabditis remanei]
Length = 404
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 11/109 (10%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFV 96
PGQ P + + +FVG L V ++ LR+ F +G+++ K+ KG GFV
Sbjct: 120 PGQQPSKVDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 179
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADY-----GNQWSGAYYGGQVYD 140
+ RE AE A+ ++NG +G+++ R ++ G+Q +Y + +D
Sbjct: 180 SYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPTHYNEKSFD 228
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 70/126 (55%), Gaps = 8/126 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT + G Q++ + Y Q+ GD NT+++V
Sbjct: 191 IEQMNGQWLGRRTIRTNWAT--RKPGDQEKPTH---YNEKSFDEIYNQTSGD--NTSVYV 243
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G + N++++++RQ F+ YG I+ V+I +G FV+F N++ A +A+ ++N +G Q
Sbjct: 244 GNI-ANLSEDEIRQAFASYGRISEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQEVGGQL 302
Query: 121 FRADYG 126
R +G
Sbjct: 303 VRCSWG 308
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC----GFVQFANRENAEEALHKLN 112
T++VG LDP+V+++ + F+Q G + K+ + G FV+F + A +AL +N
Sbjct: 45 TLYVGNLDPSVSEDLIATLFNQIGSVTKTKV-IFDGANDPYAFVEFLDHSQASQALQTMN 103
Query: 113 GTVIGKQSFRADYG 126
++ + + ++
Sbjct: 104 KRLLLDREMKVNWA 117
>gi|126341354|ref|XP_001368859.1| PREDICTED: u2 snRNP-associated SURP motif-containing protein-like
[Monodelphis domestica]
Length = 984
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 47/144 (32%), Positives = 63/144 (43%), Gaps = 38/144 (26%)
Query: 30 QYSSQGGYASNGAPGQ------------GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS 77
Q S G + S AP Q G GD S T +++G ++P V +E L Q F
Sbjct: 194 QSHSDGQHHSMDAPSQRNISSVPDDYAPGSHDVGDPSTTNLYLGNINPQVNEEMLCQEFG 253
Query: 78 QYGEIASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
++G +ASVKI + CGFV F NR +AE AL L+G +I SF
Sbjct: 254 RFGPLASVKIMWPRTDQERGRKRNCGFVAFMNRIDAERALKNLHGKMI--MSFEMKL--- 308
Query: 129 WSGAYYGGQVYDGYGYAIPPPNDP 152
G+G A+P P P
Sbjct: 309 ------------GWGKAVPIPLHP 320
>gi|344244393|gb|EGW00497.1| U2-associated protein SR140 [Cricetulus griseus]
Length = 649
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/121 (33%), Positives = 58/121 (47%), Gaps = 15/121 (12%)
Query: 15 RIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQ 74
R+ P +S Q+ S YA G GD S T +++G ++P + +E L Q
Sbjct: 139 RLSRFEPPQSDSDGQRRSILDDYAP------GSHDVGDPSTTNLYLGNINPQMNEEMLCQ 192
Query: 75 PFSQYGEIASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADY 125
F ++G +ASVKI + CGFV F NR +AE AL LNG +I + +
Sbjct: 193 EFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGW 252
Query: 126 G 126
G
Sbjct: 253 G 253
>gi|115466664|ref|NP_001056931.1| Os06g0170500 [Oryza sativa Japonica Group]
gi|75321585|sp|Q5SNN4.1|C3H40_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 40;
Short=OsC3H40
gi|55773636|dbj|BAD72175.1| RRM-containing RNA-binding protein-like [Oryza sativa Japonica
Group]
gi|113594971|dbj|BAF18845.1| Os06g0170500 [Oryza sativa Japonica Group]
gi|125596196|gb|EAZ35976.1| hypothetical protein OsJ_20278 [Oryza sativa Japonica Group]
gi|215767752|dbj|BAG99980.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 482
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D S T+++GGL+ +T++DLR F +GEI S+++ + + C FV + RE AE+A +L
Sbjct: 224 DESIRTLYIGGLNNRITEQDLRDQFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAEEL 283
Query: 112 NGTVIGK 118
++ K
Sbjct: 284 ANKLVIK 290
>gi|119599362|gb|EAW78956.1| hCG27481, isoform CRA_b [Homo sapiens]
Length = 998
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD S T +++G ++P + +E L Q F ++G +ASVKI + CGFV
Sbjct: 233 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFV 292
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADYG 126
F NR +AE AL LNG +I + +G
Sbjct: 293 AFMNRRDAERALKNLNGKMIMSFEMKLGWG 322
>gi|83283985|gb|ABC01900.1| RRM-containing RNA-binding protein-like protein [Solanum tuberosum]
Length = 487
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 44 GQGPQSE--GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANR 101
G+ P E D S T++VGG+D ++++DLR F +GEI S+K+ + +GC FV + R
Sbjct: 214 GEMPSLEPPDDESIRTLYVGGVDARISEQDLRDQFYAHGEIESIKMVLQRGCAFVTYTTR 273
Query: 102 ENAEEALHKL-NGTVIGKQSFRADYGN 127
E A +A +L N VI + +G
Sbjct: 274 EGAVKAAEELANKLVIKGLRLKLLWGR 300
>gi|410971262|ref|XP_003992089.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein [Felis
catus]
Length = 1015
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNG 113
+ASVKI + CGFV F NR +AE AL LNG
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNG 340
>gi|195123969|ref|XP_002006474.1| GI21069 [Drosophila mojavensis]
gi|193911542|gb|EDW10409.1| GI21069 [Drosophila mojavensis]
Length = 936
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD + T +++G L+P ++++ L + F +YG +AS+KI G+ CGFV
Sbjct: 184 GSFDTGDPNTTNLYLGNLNPKISEQQLMEIFGRYGPLASIKIMWPRSEEEKQRGRNCGFV 243
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ +R++AE AL LNG I R +G
Sbjct: 244 AYMSRKDAERALRTLNGRYIMGYEMRLGWG 273
>gi|195585268|ref|XP_002082411.1| GD11555 [Drosophila simulans]
gi|194194420|gb|EDX07996.1| GD11555 [Drosophila simulans]
Length = 989
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 9/85 (10%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFANR 101
GD + T +++G L+P ++++ L + F +YG +AS+KI G+ CGFV + +R
Sbjct: 210 GDPNTTNLYLGNLNPKISEQQLMEIFGRYGPLASIKIMWPRSEEEKQRGRNCGFVAYMSR 269
Query: 102 ENAEEALHKLNGTVIGKQSFRADYG 126
++AE AL LNG I R +G
Sbjct: 270 KDAERALKTLNGRYIMGYEMRLGWG 294
>gi|167391953|ref|XP_001739964.1| nucleolysin TIAR [Entamoeba dispar SAW760]
gi|165896141|gb|EDR23641.1| nucleolysin TIAR, putative [Entamoeba dispar SAW760]
Length = 306
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 10/128 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M MNG R +++ T +S +Q S +E N T+++
Sbjct: 187 MQMMNGEKLEGRNIKVNWVTSNIASKTEQPKRSYDEI----------NNETSIQNCTVYI 236
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G + NV +DL+Q ++YG I V++ KG F++F+ E+A A+ NG +I +
Sbjct: 237 GNIPKNVESDDLKQLLAEYGSIEEVRLNKDKGYAFIKFSKHESATSAILMCNGKIINGST 296
Query: 121 FRADYGNQ 128
R +G +
Sbjct: 297 LRCSWGRE 304
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 111
IFVGGL P V D+ L + F ++G + ++ KG GFV F +E+AE A+ +
Sbjct: 131 IFVGGLQPEVNDDLLYKTFQKFGRVTDARVLKFTQTGKSKGYGFVTFIRKEDAETAMQMM 190
Query: 112 NGTVIGKQSFRADY 125
NG + ++ + ++
Sbjct: 191 NGEKLEGRNIKVNW 204
>gi|410909191|ref|XP_003968074.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
[Takifugu rubripes]
Length = 974
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD S T +++G ++P + +E L Q F +YG +ASVKI + CGFV
Sbjct: 201 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERARERNCGFV 260
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADYG 126
F NR +AE AL LNG +I + +G
Sbjct: 261 AFMNRRDAERALKHLNGKMIMNFEMKLGWG 290
>gi|19922658|ref|NP_611535.1| CG9346 [Drosophila melanogaster]
gi|7291222|gb|AAF46654.1| CG9346 [Drosophila melanogaster]
gi|220947134|gb|ACL86110.1| CG9346-PA [synthetic construct]
gi|220956694|gb|ACL90890.1| CG9346-PA [synthetic construct]
Length = 957
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 9/85 (10%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFANR 101
GD + T +++G L+P ++++ L + F +YG +AS+KI G+ CGFV + +R
Sbjct: 210 GDPNTTNLYLGNLNPKISEQQLMEIFGRYGPLASIKIMWPRSEEEKQRGRNCGFVAYMSR 269
Query: 102 ENAEEALHKLNGTVIGKQSFRADYG 126
++AE AL LNG I R +G
Sbjct: 270 KDAERALKTLNGRYIMGYEMRLGWG 294
>gi|27819958|gb|AAL39666.2| LD23810p, partial [Drosophila melanogaster]
Length = 958
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 9/85 (10%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFANR 101
GD + T +++G L+P ++++ L + F +YG +AS+KI G+ CGFV + +R
Sbjct: 211 GDPNTTNLYLGNLNPKISEQQLMEIFGRYGPLASIKIMWPRSEEEKQRGRNCGFVAYMSR 270
Query: 102 ENAEEALHKLNGTVIGKQSFRADYG 126
++AE AL LNG I R +G
Sbjct: 271 KDAERALKTLNGRYIMGYEMRLGWG 295
>gi|15241430|ref|NP_199233.1| nuclear cap-binding protein subunit 2 [Arabidopsis thaliana]
gi|145334719|ref|NP_001078705.1| nuclear cap-binding protein subunit 2 [Arabidopsis thaliana]
gi|75338554|sp|Q9XFD1.1|NCBP2_ARATH RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=AtCBP20
gi|4768968|gb|AAD29697.1|AF140219_1 nuclear cap-binding protein [Arabidopsis thaliana]
gi|9759521|dbj|BAB10987.1| nuclear cap-binding protein; CBP20 [Arabidopsis thaliana]
gi|28466941|gb|AAO44079.1| At5g44200 [Arabidopsis thaliana]
gi|110735694|dbj|BAE99827.1| nuclear cap-binding protein [Arabidopsis thaliana]
gi|332007690|gb|AED95073.1| nuclear cap-binding protein subunit 2 [Arabidopsis thaliana]
gi|332007691|gb|AED95074.1| nuclear cap-binding protein subunit 2 [Arabidopsis thaliana]
Length = 257
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 15/118 (12%)
Query: 46 GPQSEGDSS---NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG----CGF--V 96
G Q E D + +TT+++G + T+E L + FS+ GEI + + + K CGF V
Sbjct: 21 GTQEEFDEALRASTTVYIGNVSFYTTEEQLYELFSRAGEIKKIIMGLDKNTKTPCGFCFV 80
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADY------GNQWSGAYYGGQVYDGYGYAIPP 148
F +RE+ E+A+ ++GT++ + R D+ G QW GGQV D Y P
Sbjct: 81 LFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQEGRQWGRGRSGGQVRDEYRTDYDP 138
>gi|45946398|gb|AAH68265.1| RIKEN cDNA 2610101N10 gene [Mus musculus]
Length = 985
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 198 RRSMDVPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 255
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ASVKI + CGFV F +R +AE AL LNG +I + +G
Sbjct: 256 LASVKIMWPRTDEERARERNCGFVAFMSRRDAERALKNLNGKMIMSFEMKLGWG 309
>gi|395335144|gb|EJF67520.1| hypothetical protein DICSQDRAFT_164378 [Dichomitus squalens
LYAD-421 SS1]
Length = 395
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 54/91 (59%), Gaps = 7/91 (7%)
Query: 45 QGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQ 97
QG Q++ D+SN +FVG L P V D+ L + FS +G ++ ++ +G GF+
Sbjct: 65 QGQQNKEDTSNHYHVFVGDLSPEVNDDVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLA 124
Query: 98 FANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
F ++ +AE+A+ +NG +G ++ R ++ NQ
Sbjct: 125 FRDKTDAEQAIATMNGEWLGSRAIRVNWANQ 155
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQ-----GPQS------ 49
+ MNG + SR +R+ A +K+ G + G GAP GP S
Sbjct: 135 IATMNGEWLGSRAIRVNWAN-QKTQGAPPAGPPRTGMGG-GAPAPMNFQGGPLSYESVVQ 192
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 109
+ + NTT++VG L P T DL F G ++ +++ +G FV+ E+A A+
Sbjct: 193 QTPAYNTTVYVGNLVPYATQADLIPLFQSIGYLSEIRMQADRGFAFVKLDTHEHAAMAIV 252
Query: 110 KLNGTVIGKQSFRADYGN 127
+L G ++ + + +G
Sbjct: 253 QLQGQMVHGRPIKCSWGK 270
>gi|340383337|ref|XP_003390174.1| PREDICTED: ELAV-like protein 3-like [Amphimedon queenslandica]
Length = 392
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFA 99
GPQ+ + T + V L +T+E L+Q FSQ+G + S K+ + G GFV +
Sbjct: 14 GPQNPETKAKTNLIVNYLPQTLTEEGLKQLFSQFGVVLSCKLIKDKSSGISLGYGFVNYG 73
Query: 100 NRENAEEALHKLNGTVIGKQSFRADYGNQWSGAYYGGQVY 139
+ E AE A+ K+NGT + ++ + Y S A VY
Sbjct: 74 SAEEAEHAIQKMNGTTLESKTLKVSYARPSSVAIKNANVY 113
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEAL 108
N ++V L P ++ +L F YG I + K+ G+G GFV+F AE A+
Sbjct: 109 NANVYVANLPPQLSLTELDALFQPYGTIITSKVLTDEDTGAGRGVGFVRFDKYTQAEVAI 168
Query: 109 HKLNG--TVIGKQSFRADYGN 127
LNG V G Q + N
Sbjct: 169 AALNGKQLVGGTQPLLVKFAN 189
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 41 GAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCG 94
G G S GD S +FV L D L Q FS +G I SV + + K G
Sbjct: 298 GGNGSTMTSPGDPS-YCVFVYNLPETCQDFLLYQLFSPFGAITSVNVIRDLKSGLCKRYG 356
Query: 95 FVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
FV + E+A A+ LNG V ++ + + NQ
Sbjct: 357 FVNMKSYEDACSAIMTLNGYVHDGKTLQVSFKNQ 390
>gi|154413444|ref|XP_001579752.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121913962|gb|EAY18766.1| hypothetical protein TVAG_267990 [Trichomonas vaginalis G3]
Length = 248
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 19 ATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQ 78
A PR + ++ + A G+ P+S+ + +T +F+ + P T++DLR SQ
Sbjct: 11 AQPRARAAFRGPRPQSESFQRTPASGRRPRSQVITPSTNVFINYIPPRFTEQDLRNLCSQ 70
Query: 79 YGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
YGEI S KI + K GFV+F A A+ ++G IG + A Y
Sbjct: 71 YGEIISSKIMINLETGQSKCFGFVKFRELSQAHAAIQAIDGMSIGNKRLLAKYA 124
>gi|432875366|ref|XP_004072806.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oryzias latipes]
Length = 386
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ M G + R +R AT RK + Y S + S + S+ SN T++
Sbjct: 153 IQHMGGQWLGGRQIRTNWAT-RKPPAPKTTYESNSKHLS----FEEVMSQSSPSNCTVYC 207
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I V++ KG FV+F + E+A A+ +NGT I
Sbjct: 208 GGVSSGLTEQLMRQTFSAFGQIMEVRVFPDKGYSFVRFNSHESAAHAIVSVNGTSIDGHV 267
Query: 121 FRADYGNQ 128
+ +G +
Sbjct: 268 VKCYWGKE 275
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG
Sbjct: 79 NWATTPTSQKKDTSNHFHVFVGDLSPEITTEDVKAAFAPFGRISDARVVKDMATGKSKGY 138
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV F N+ +AE A+ + G +G + R ++ +
Sbjct: 139 GFVSFFNKWDAENAIQHMGGQWLGGRQIRTNWATR 173
>gi|304798|gb|AAA28828.1| polyadenylate-binding protein [Drosophila melanogaster]
gi|304800|gb|AAA02941.1| polyadenylate-binding protein [Drosophila melanogaster]
Length = 465
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 23/118 (19%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 95
+PG P+++ SS+ IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 82 SPGNQPKTD-ISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAF 140
Query: 96 VQFANRENAEEALHKLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPS 153
V F + AE A+ +N I +S R ++ + +PPP +PS
Sbjct: 141 VSFVKKAEAENAIQAMNRQWIASRSIRTNWSTR----------------KLPPPREPS 182
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 15/129 (11%)
Query: 4 MNGVYCSSRPMRIGAAT-----PRKSSGYQQQYSSQGGYASNGAPGQGPQ--------SE 50
MN + +SR +R +T PR+ S Q GG NG+ +G Q ++
Sbjct: 156 MNRQWIASRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQ 215
Query: 51 GDSSNTTIFVGGLDPNVTDEDL-RQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL- 108
+NTT++ GG PNV +DL + F Q+G I V++ KG F++F +E A A+
Sbjct: 216 SSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIE 275
Query: 109 HKLNGTVIG 117
H N V G
Sbjct: 276 HTHNSEVHG 284
>gi|328715704|ref|XP_001946343.2| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 1
[Acyrthosiphon pisum]
Length = 419
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 40 NGAPGQGPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 92
N GPQ + D+S + IFVG L P + + LR+ F+ +GEI+ ++ KG
Sbjct: 78 NWVSSPGPQLKADTSKHHHIFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTLKSKG 137
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV F + AE A+ +NG +G +S R ++ +
Sbjct: 138 YGFVSFLKKAEAESAIAAMNGQWLGSRSIRTNWATR 173
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 11/130 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSS--NTTI 58
+ MNG + SR +R AT RK + SN P + SS N T+
Sbjct: 153 IAAMNGQWLGSRSIRTNWAT-RKPPTLKTD--------SNTKPLTFDEVYNQSSPTNCTV 203
Query: 59 FVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGK 118
+ GGL +TDE +++ F+ +G I +++ KG FV+FA +E+A A+ ++ + I
Sbjct: 204 YCGGLTSGLTDELVQKTFAPFGNIQEIRVFKDKGYAFVRFATKESATHAIVAVHNSDING 263
Query: 119 QSFRADYGNQ 128
Q + +G +
Sbjct: 264 QPVKCSWGKE 273
>gi|41581275|emb|CAE47924.1| oligouridylate binding protein, putative [Aspergillus fumigatus]
Length = 485
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 11/108 (10%)
Query: 27 YQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVK 86
+Q + Y SN A E SS+ IFVG L V DE L Q FS +G ++ +
Sbjct: 159 HQSEIRVNWAYQSNSA-----NKEDTSSHFHIFVGDLSNEVNDEILLQAFSAFGSVSEAR 213
Query: 87 IPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
+ +G GFV F R +AE+AL+ ++G +G ++ R ++ NQ
Sbjct: 214 VMWDMKTGRSRGYGFVAFRERADAEKALNAMDGEWLGSRAIRCNWANQ 261
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 55/120 (45%), Gaps = 15/120 (12%)
Query: 16 IGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQP 75
I A SG +S GGY AP + + ++VGGLDP VT++ L+Q
Sbjct: 59 IPTAITSPMSGNMMSPTSAGGYVRRAAP--------EPNKRALYVGGLDPRVTEDILKQI 110
Query: 76 FSQYGEIASVKIPVGKGC-------GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
F G + SVKI K GFV+F + AE A+ LNG I + R ++ Q
Sbjct: 111 FETTGHVQSVKIIPDKNFNSKGYNYGFVEFDDPGAAERAMQTLNGRRIHQSEIRVNWAYQ 170
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGG------YASNGAPGQGPQS---- 49
+ M+G + SR +R A + + S QQQ + G + + P G QS
Sbjct: 241 LNAMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMV 300
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T DL F +G + ++ +G F++ ENA A
Sbjct: 301 VQQTPQWQTTCYVGNLTPYTTQNDLVPLFHNFGYVLETRLQADRGFAFIKMDTHENAAMA 360
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ +LNG + + + +G
Sbjct: 361 ICQLNGYNVNGRPLKCSWG 379
>gi|395528085|ref|XP_003766162.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein
[Sarcophilus harrisii]
Length = 1186
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 398 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 455
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ASVKI + CGFV F NR +AE AL LNG +I + +G
Sbjct: 456 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWG 509
>gi|380811072|gb|AFE77411.1| U2 snRNP-associated SURP motif-containing protein [Macaca mulatta]
gi|383416995|gb|AFH31711.1| U2 snRNP-associated SURP motif-containing protein [Macaca mulatta]
gi|384946074|gb|AFI36642.1| U2 snRNP-associated SURP motif-containing protein [Macaca mulatta]
Length = 1028
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD S T +++G ++P + +E L Q F ++G +ASVKI + CGFV
Sbjct: 263 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFV 322
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADYG 126
F NR +AE AL LNG +I + +G
Sbjct: 323 AFMNRRDAERALKNLNGKMIMSFEMKLGWG 352
>gi|357614550|gb|EHJ69142.1| hypothetical protein KGM_18723 [Danaus plexippus]
Length = 877
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGC 93
P G GD + T +++G L+P +T++ L + F +YG +AS+KI G+ C
Sbjct: 149 PDVGSYDTGDPNTTNLYLGNLNPKITEQQLMEIFGRYGPLASIKIMWPRSDEEKARGRNC 208
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
GFV F +R++ E AL +NG I + +G
Sbjct: 209 GFVAFMSRKDGERALRCINGKEIMNYEMKLGWG 241
>gi|209364570|ref|NP_001127512.1| U2 snRNP-associated SURP motif-containing protein [Pongo abelii]
gi|75070608|sp|Q5R7X2.1|SR140_PONAB RecName: Full=U2 snRNP-associated SURP motif-containing protein;
AltName: Full=140 kDa Ser/Arg-rich domain protein;
AltName: Full=U2-associated protein SR140
gi|55730839|emb|CAH92138.1| hypothetical protein [Pongo abelii]
Length = 1028
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD S T +++G ++P + +E L Q F ++G +ASVKI + CGFV
Sbjct: 263 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFV 322
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADYG 126
F NR +AE AL LNG +I + +G
Sbjct: 323 AFMNRRDAERALKNLNGKMIMSFEMKLGWG 352
>gi|327267007|ref|XP_003218294.1| PREDICTED: u2-associated protein SR140-like [Anolis carolinensis]
Length = 989
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD S T +++G ++P + +E L Q F ++G +ASVKI + CGFV
Sbjct: 222 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFV 281
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADYG 126
F NR +AE AL LNG +I + +G
Sbjct: 282 AFMNRRDAERALKNLNGKMIMSFEMKLGWG 311
>gi|224067689|ref|XP_002198708.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Taeniopygia guttata]
Length = 420
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITESDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSFRADYG 126
N ++ + +G
Sbjct: 288 FNKLIVNGRRLNVKWG 303
>gi|195455607|ref|XP_002074793.1| GK22959 [Drosophila willistoni]
gi|194170878|gb|EDW85779.1| GK22959 [Drosophila willistoni]
Length = 929
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD + T +++G L+P ++++ L + F +YG +AS+KI G+ CGFV
Sbjct: 210 GSFDTGDPNTTNLYLGNLNPKISEQQLMEIFGRYGPLASIKIMWPRSEEEKQRGRNCGFV 269
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ +R++AE AL LNG + R +G
Sbjct: 270 AYMSRKDAERALRTLNGRYVMGYEMRLGWG 299
>gi|148688989|gb|EDL20936.1| RIKEN cDNA 2610101N10 [Mus musculus]
Length = 1028
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD S T +++G ++P + +E L Q F ++G +ASVKI + CGFV
Sbjct: 263 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFV 322
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADYG 126
F NR +AE AL LNG +I + +G
Sbjct: 323 AFMNRRDAERALKNLNGKMIMSFEMKLGWG 352
>gi|13623693|gb|AAH06474.1| Unknown (protein for IMAGE:2820942), partial [Homo sapiens]
Length = 1027
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD S T +++G ++P + +E L Q F ++G +ASVKI + CGFV
Sbjct: 262 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFV 321
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADYG 126
F NR +AE AL LNG +I + +G
Sbjct: 322 AFMNRRDAERALKNLNGKMIMSFEMKLGWG 351
>gi|149064345|gb|EDM14548.1| RNA binding motif protein 22, isoform CRA_a [Rattus norvegicus]
Length = 377
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI +V + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTVTVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSFRADYG 126
N ++ + +G
Sbjct: 288 FNKLIVNGRRLNVKWG 303
>gi|149018880|gb|EDL77521.1| rCG25679, isoform CRA_b [Rattus norvegicus]
Length = 1028
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD S T +++G ++P + +E L Q F ++G +ASVKI + CGFV
Sbjct: 263 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFV 322
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADYG 126
F NR +AE AL LNG +I + +G
Sbjct: 323 AFMNRRDAERALKNLNGKMIMSFEMKLGWG 352
>gi|297791443|ref|XP_002863606.1| cap-binding protein 20 [Arabidopsis lyrata subsp. lyrata]
gi|297309441|gb|EFH39865.1| cap-binding protein 20 [Arabidopsis lyrata subsp. lyrata]
Length = 257
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 15/118 (12%)
Query: 46 GPQSEGDSS---NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG----CGF--V 96
G Q E D + +TT+++G + T+E L + FS+ GEI + + + K CGF V
Sbjct: 21 GTQEEFDEALRASTTVYIGNVSFYTTEEQLYELFSRAGEIKKIIMGLDKNTKTPCGFCFV 80
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADY------GNQWSGAYYGGQVYDGYGYAIPP 148
F +RE+ E+A+ ++GT++ + R D+ G QW GGQV D Y P
Sbjct: 81 LFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQEGRQWGRGRSGGQVRDEYRTDYDP 138
>gi|70995622|ref|XP_752566.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus fumigatus Af293]
gi|66850201|gb|EAL90528.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus fumigatus Af293]
gi|159131321|gb|EDP56434.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus fumigatus A1163]
Length = 489
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 11/99 (11%)
Query: 36 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------ 89
Y SN A E SS+ IFVG L V DE L Q FS +G ++ ++
Sbjct: 166 AYQSNSA-----NKEDTSSHFHIFVGDLSNEVNDEILLQAFSAFGSVSEARVMWDMKTGR 220
Query: 90 GKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
+G GFV F R +AE+AL+ ++G +G ++ R ++ NQ
Sbjct: 221 SRGYGFVAFRERADAEKALNAMDGEWLGSRAIRCNWANQ 259
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGG------YASNGAPGQGPQS---- 49
+ M+G + SR +R A + + S QQQ + G + + P G QS
Sbjct: 239 LNAMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMV 298
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T DL F +G + ++ +G F++ ENA A
Sbjct: 299 VQQTPQWQTTCYVGNLTPYTTQNDLVPLFHNFGYVLETRLQADRGFAFIKMDTHENAAMA 358
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ +LNG + + + +G
Sbjct: 359 ICQLNGYNVNGRPLKCSWG 377
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 16 IGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQP 75
I A SG +S GGY AP + + ++VGGLDP VT++ L+Q
Sbjct: 59 IPTAITSPMSGNMMSPTSAGGYVRRAAP--------EPNKRALYVGGLDPRVTEDILKQI 110
Query: 76 FSQYGEIASVKIPVGKGCGFVQFAN 100
F G + SVKI K N
Sbjct: 111 FETTGHVQSVKIIPDKNDTITALLN 135
>gi|71043848|ref|NP_001020847.1| pre-mRNA-splicing factor RBM22 [Rattus norvegicus]
gi|81907895|sp|Q4V7D7.1|RBM22_RAT RecName: Full=Pre-mRNA-splicing factor RBM22; AltName:
Full=RNA-binding motif protein 22
gi|66910908|gb|AAH97991.1| RNA binding motif protein 22 [Rattus norvegicus]
Length = 420
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI +V + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTVTVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSFRADYG 126
N ++ + +G
Sbjct: 288 FNKLIVNGRRLNVKWG 303
>gi|353237193|emb|CCA69172.1| related to PUB1-major polyadenylated RNA-binding protein of nucleus
and cytoplasm [Piriformospora indica DSM 11827]
Length = 415
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 54/91 (59%), Gaps = 7/91 (7%)
Query: 45 QGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQ 97
QG ++ D++N +FVG L P VTD+ L + FS +G ++ ++ +G GF+
Sbjct: 65 QGTTNKEDTTNHYHVFVGDLSPEVTDDVLSKAFSAFGTLSDARVMWDMNSGKSRGYGFLA 124
Query: 98 FANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
F ++ +AE+A+ +NG +G ++ R ++ NQ
Sbjct: 125 FRDKTDAEQAIATMNGEWLGSRAIRVNWANQ 155
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
NTT++VG L T DL F G ++ ++I +G FV+ + E A A+ +L G
Sbjct: 243 NTTVYVGNLPSYATQSDLIPLFQTIGYVSEIRIQADRGFAFVKLESHEAAAAAIVQLQGH 302
Query: 115 VIGKQSFRADYGN 127
++ + + +G
Sbjct: 303 LVQGRPIKCSWGK 315
>gi|195486673|ref|XP_002091605.1| GE12157 [Drosophila yakuba]
gi|194177706|gb|EDW91317.1| GE12157 [Drosophila yakuba]
Length = 960
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD + T +++G L+P ++++ L + F +YG +AS+KI G+ CGFV
Sbjct: 205 GSFDTGDPNTTNLYLGNLNPKISEQQLMEIFGRYGPLASIKIMWPRSEEEKQRGRNCGFV 264
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ +R++AE AL LNG I R +G
Sbjct: 265 AYMSRKDAERALRTLNGRYIMGYEMRLGWG 294
>gi|195995479|ref|XP_002107608.1| hypothetical protein TRIADDRAFT_51296 [Trichoplax adhaerens]
gi|190588384|gb|EDV28406.1| hypothetical protein TRIADDRAFT_51296 [Trichoplax adhaerens]
Length = 828
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 26/119 (21%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGC 93
PG G GD + T ++VG L+P++ ++ L + F +YG +ASVKI + C
Sbjct: 188 PGYGSYDTGDPNTTNLYVGNLNPSIDEDYLCKLFGEYGALASVKIMWPRTDEEKKRNRNC 247
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDP 152
GFV F R + ++AL LNG I + +++ G+G A+P P P
Sbjct: 248 GFVAFMTRTDGDKALRALNGKEIMEY-----------------ELHVGWGKAVPVPPHP 289
>gi|326928574|ref|XP_003210452.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Meleagris
gallopavo]
Length = 420
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITESDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSFRADYG 126
N ++ + +G
Sbjct: 288 FNKLIVNGRRLNVKWG 303
>gi|170055835|ref|XP_001863758.1| nucleolysin tia-1 [Culex quinquefasciatus]
gi|167875726|gb|EDS39109.1| nucleolysin tia-1 [Culex quinquefasciatus]
Length = 456
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 95
+PG P+++ S + IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 83 SPGNQPKTD-TSQHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTLKSKGYAF 141
Query: 96 VQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
V F + AE A+ +NG +G +S R ++ +
Sbjct: 142 VSFVKKAEAENAIQMMNGQWLGSRSIRTNWSTR 174
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 63/127 (49%), Gaps = 6/127 (4%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG-QGPQSEGDSSNTTIFVGG 62
MNG + SR +R +T RK ++ + G S PG + + +NTT++ GG
Sbjct: 157 MNGQWLGSRSIRTNWST-RKPPAPRE---NTKGIKSGKTPGFEEIYNNTGPTNTTVYCGG 212
Query: 63 LDPN-VTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSF 121
PN ++D ++ F Q+G I V++ KG F++F ++E A A+ + + +
Sbjct: 213 FPPNTISDNLIKTHFGQFGSIHDVRVFKDKGYAFIKFISKEAAARAIEGTHNSEVQGHPV 272
Query: 122 RADYGNQ 128
+ +G +
Sbjct: 273 KCYWGKE 279
Score = 42.4 bits (98), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC---GFVQFANRENAEEALHKLNG 113
T++VG LD +VT++ L F Q G + S KI F+++A+ ++A+ AL +N
Sbjct: 9 TLYVGNLDQSVTEDLLCALFGQMGAVKSCKIIREASSDPYAFIEYASHQSAQTALAAMNK 68
Query: 114 TVIGKQSFRADY----GNQ 128
+ K+ + ++ GNQ
Sbjct: 69 RLFLKKEIKVNWATSPGNQ 87
>gi|402589265|gb|EJW83197.1| RNA recognition domain-containing protein, partial [Wuchereria
bancrofti]
Length = 231
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 63/124 (50%), Gaps = 15/124 (12%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQ 97
Q P+ + S N +FVG L V + L+ F +GEI+ K+ KG GFV
Sbjct: 10 SQSPKVDT-SKNYHVFVGDLSTEVNNCTLKAAFESFGEISEAKVIRDPQTLKSKGYGFVS 68
Query: 98 FANRENAEEALHKLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAA 157
F +ENA++A+ ++NG +IG++ R + W+ + G G A+ PP +++ A
Sbjct: 69 FPVKENAQKAIEEMNGQMIGRRQIRTN----WAVRRFDG----GEENAMKPPTYDNIFNA 120
Query: 158 AAAA 161
AA
Sbjct: 121 THAA 124
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
++NT+++VGG+ P TDE+L Q FS + V++ +G FV++ N++ A A+ +N
Sbjct: 123 AANTSVYVGGISPVTTDEELMQSFSAIATVIEVRLFKQQGYAFVRYLNKDAAARAIMSMN 182
Query: 113 GTVIGKQSFRADYG 126
G VI Q R +
Sbjct: 183 GKVINGQKIRCSWS 196
>gi|440803975|gb|ELR24858.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 964
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 61/148 (41%), Gaps = 14/148 (9%)
Query: 1 MTEMNGVYCS---SRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTT 57
+ E+ ++ R R P K+ Q + + S P G GD T
Sbjct: 124 IDELKDMFIKEQQKRDERFSGVAPEKAK--QLERLERLKELSESLPPLGSHDSGDPYTTN 181
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFANRENAEEAL 108
++VG + P +E LR+ F +YG I SVKI + GFVQF RE+AE A
Sbjct: 182 LYVGNVSPQANEELLRKEFGKYGNIYSVKIMWPRTDDEKRRNRNSGFVQFEKREDAERAK 241
Query: 109 HKLNGTVIGKQSFRADYGNQWSGAYYGG 136
LNG + R +G S GG
Sbjct: 242 DALNGVELMGYELRIGWGKAVSKPVPGG 269
>gi|57525003|ref|NP_001006151.1| pre-mRNA-splicing factor RBM22 [Gallus gallus]
gi|82233932|sp|Q5ZM16.1|RBM22_CHICK RecName: Full=Pre-mRNA-splicing factor RBM22; AltName:
Full=RNA-binding motif protein 22
gi|53127796|emb|CAG31227.1| hypothetical protein RCJMB04_3g16 [Gallus gallus]
Length = 420
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITESDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSFRADYG 126
N ++ + +G
Sbjct: 288 FNKLIVNGRRLNVKWG 303
>gi|118380139|ref|XP_001023234.1| hypothetical protein TTHERM_00494500 [Tetrahymena thermophila]
gi|89305001|gb|EAS02989.1| hypothetical protein TTHERM_00494500 [Tetrahymena thermophila
SB210]
Length = 376
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 53/104 (50%), Gaps = 8/104 (7%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK 110
D + T++++G + P+ T++D Q F +YG I S+KI K C FV F R+ AEEA+
Sbjct: 241 ADPTITSLYIGNITPDFTEQDFHQIFVKYGPIQSIKIISQKSCAFVNFIARKAAEEAIKD 300
Query: 111 L--NGTVIGKQSFRADYGNQWSGAYYGGQVYDGY-GYAIPPPND 151
L N V G Q WS A Q + GY I PP +
Sbjct: 301 LYGNFNVKGIQ-----LSISWSRAGKNQQQQSEFQGYNIQPPQE 339
>gi|358333735|dbj|GAA52209.1| U2-associated protein SR140 [Clonorchis sinensis]
Length = 1340
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 23/111 (20%)
Query: 26 GYQQQYSSQGGYASNGAPGQGPQS--------------EGDSSNTTIFVGGLDPNVTDED 71
G+ QQ S G +G+P +GD + T +F+G L+P +T++
Sbjct: 245 GFTQQSSGVGLLGDSGSPSNIYGRRGQRDRRDDYPYDFDGDRTTTNLFLGNLNPKMTEQQ 304
Query: 72 LRQPFSQYGEIASVKI---------PVGKGCGFVQFANRENAEEALHKLNG 113
L + F +YG +ASVKI G+ CGFV F NR++ E AL + G
Sbjct: 305 LCEAFGRYGPLASVKIMWPRTDEERSRGRNCGFVAFMNRKDGERALDNIRG 355
>gi|387018642|gb|AFJ51439.1| pre-mRNA-splicing factor RBM22-like [Crotalus adamanteus]
Length = 421
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITESDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSFRADYG 126
N ++ + +G
Sbjct: 288 FNKLIVNGRRLNVKWG 303
>gi|195346271|ref|XP_002039689.1| GM15794 [Drosophila sechellia]
gi|194135038|gb|EDW56554.1| GM15794 [Drosophila sechellia]
Length = 957
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 9/85 (10%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFANR 101
GD + T +++G L+P ++++ L + F +YG +AS+KI G+ CGFV + +R
Sbjct: 210 GDPNTTNLYLGNLNPKISEQQLMEIFGRYGPLASIKIMWPRSEEEKQRGRNCGFVAYMSR 269
Query: 102 ENAEEALHKLNGTVIGKQSFRADYG 126
++AE AL LNG I R +G
Sbjct: 270 KDAERALKTLNGRYIMGYEMRLGWG 294
>gi|15237666|ref|NP_196048.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|20260152|gb|AAM12974.1| RNA-binding protein-like [Arabidopsis thaliana]
gi|21387121|gb|AAM47964.1| RNA-binding protein-like [Arabidopsis thaliana]
gi|332003340|gb|AED90723.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 310
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALH 109
+ IFVGGL P VTD DL + FS++G+I +I + +G GF+ FA+R +E++
Sbjct: 7 SRIFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRAMDESIR 66
Query: 110 KLNGTVIGKQ 119
+++G G +
Sbjct: 67 EMHGRDFGDR 76
>gi|395817744|ref|XP_003782315.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Otolemur garnettii]
Length = 406
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSFRADYGNQWSGAY 133
N ++ + +G + +
Sbjct: 288 FNKLIVNGRRLNVKWGRIFKEPF 310
>gi|4096748|gb|AAC99998.1| ORF; Method: conceptual translation supplied by author [Homo
sapiens]
Length = 367
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 175 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 234
Query: 111 LNGTVIGKQSFRADYG 126
N ++ + +G
Sbjct: 235 FNKLIVNGRRLNVKWG 250
>gi|157131270|ref|XP_001655847.1| gar2, putative [Aedes aegypti]
gi|108871595|gb|EAT35820.1| AAEL012045-PA, partial [Aedes aegypti]
Length = 954
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 10/114 (8%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD + T +++G L+P +++++L + F +YG +AS+KI G+ CGFV
Sbjct: 185 GSFDNGDPNTTNLYLGNLNPKISEQELMELFGKYGPLASIKIMWPRSEEERARGRNCGFV 244
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGY-GYAIPPP 149
+ +R +AE AL LNG + + +G + + Y +PPP
Sbjct: 245 AYMSRRDAERALRALNGKEVMNYLMKLGWGKSVPIMTHPIYIPPALVAYTLPPP 298
>gi|255558830|ref|XP_002520438.1| RNA binding motif protein, putative [Ricinus communis]
gi|223540280|gb|EEF41851.1| RNA binding motif protein, putative [Ricinus communis]
Length = 285
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 42/67 (62%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D S T++VGGLD +T++DLR F +GEI S+K+ + FV + RE AE+A +L
Sbjct: 42 DESIKTLYVGGLDARITEQDLRDNFYAHGEIESIKMVPQRAIAFVTYTTREGAEKAAEEL 101
Query: 112 NGTVIGK 118
+ ++ K
Sbjct: 102 SNKLVIK 108
>gi|148677878|gb|EDL09825.1| mCG6024, isoform CRA_c [Mus musculus]
Length = 421
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSFRADYG 126
N ++ + +G
Sbjct: 288 FNKLIVNGRRLNVKWG 303
>gi|296193255|ref|XP_002744418.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Callithrix jacchus]
Length = 420
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSFRADYG 126
N ++ + +G
Sbjct: 288 FNKLIVNGRRLNVKWG 303
>gi|403285535|ref|XP_003934078.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Saimiri boliviensis
boliviensis]
Length = 420
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSFRADYG 126
N ++ + +G
Sbjct: 288 FNKLIVNGRRLNVKWG 303
>gi|327265402|ref|XP_003217497.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Anolis
carolinensis]
Length = 421
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSFRADYG 126
N ++ + +G
Sbjct: 288 FNKLIVNGRRLNVKWG 303
>gi|119582116|gb|EAW61712.1| RNA binding motif protein 22, isoform CRA_c [Homo sapiens]
Length = 421
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 229 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 288
Query: 111 LNGTVIGKQSFRADYG 126
N ++ + +G
Sbjct: 289 FNKLIVNGRRLNVKWG 304
>gi|426229912|ref|XP_004009027.1| PREDICTED: pre-mRNA-splicing factor RBM22 isoform 1 [Ovis aries]
Length = 430
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSFRADYG 126
N ++ + +G
Sbjct: 288 FNKLIVNGRRLNVKWG 303
>gi|225441084|ref|XP_002264613.1| PREDICTED: probable polyadenylate-binding protein At2g36660 [Vitis
vinifera]
gi|297740018|emb|CBI30200.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 5/75 (6%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANRENAEE 106
D+ T +++ LDP+VT+E LR+ F ++G+IAS+ I + +G GFV F + E+A+
Sbjct: 187 DAKYTNLYIKNLDPDVTEEALREKFFEFGKIASLVISKDENGMSRGFGFVNFESPEDAKR 246
Query: 107 ALHKLNGTVIGKQSF 121
AL LNG +G +
Sbjct: 247 ALEALNGLQLGSKVL 261
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEALHKLN 112
+FV L ++ + L+ F ++G I S K+ V KG GFVQF + E A A+ KLN
Sbjct: 102 VFVKNLSDSIDNVRLQAMFQKFGNILSCKVVVTEDGKSKGYGFVQFESEEYANAAIEKLN 161
Query: 113 GTVI-GKQSF 121
G +I GKQ +
Sbjct: 162 GFIIDGKQIY 171
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKI----PVGKGC--GFVQFANRENAEEALHK 110
+++VG L P++TD L FS++ +ASV+I G+ G+V F + ++A A+
Sbjct: 13 SLYVGDLHPDITDGLLFDAFSEFKSLASVRICRDSSSGRSLCYGYVNFISPQDASHAIEA 72
Query: 111 LNGTVIGKQSFRADYGNQWSGAYYGG 136
N T++ + R + ++ A G
Sbjct: 73 KNHTMLHGKVIRVMWSHRDPDARRSG 98
>gi|444723694|gb|ELW64335.1| Pre-mRNA-splicing factor RBM22 [Tupaia chinensis]
Length = 428
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 236 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 295
Query: 111 LNGTVIGKQSFRADYG 126
N ++ + +G
Sbjct: 296 FNKLIVNGRRLNVKWG 311
>gi|148677877|gb|EDL09824.1| mCG6024, isoform CRA_b [Mus musculus]
Length = 436
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 243 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 302
Query: 111 LNGTVIGKQSFRADYG 126
N ++ + +G
Sbjct: 303 FNKLIVNGRRLNVKWG 318
>gi|8922328|ref|NP_060517.1| pre-mRNA-splicing factor RBM22 [Homo sapiens]
gi|110625591|ref|NP_080052.1| pre-mRNA-splicing factor RBM22 [Mus musculus]
gi|383873093|ref|NP_001244425.1| pre-mRNA-splicing factor RBM22 [Macaca mulatta]
gi|73954184|ref|XP_546302.2| PREDICTED: pre-mRNA-splicing factor RBM22 [Canis lupus familiaris]
gi|114602891|ref|XP_001167240.1| PREDICTED: pre-mRNA-splicing factor RBM22 isoform 2 [Pan
troglodytes]
gi|291387642|ref|XP_002710359.1| PREDICTED: RNA binding motif protein 22 [Oryctolagus cuniculus]
gi|332235023|ref|XP_003266703.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Nomascus leucogenys]
gi|344265156|ref|XP_003404652.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Loxodonta africana]
gi|348583291|ref|XP_003477406.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Cavia porcellus]
gi|397517732|ref|XP_003829060.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Pan paniscus]
gi|402873102|ref|XP_003900425.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Papio anubis]
gi|410949463|ref|XP_003981441.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Felis catus]
gi|426350648|ref|XP_004042882.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Gorilla gorilla gorilla]
gi|74762758|sp|Q9NW64.1|RBM22_HUMAN RecName: Full=Pre-mRNA-splicing factor RBM22; AltName:
Full=RNA-binding motif protein 22; AltName: Full=Zinc
finger CCCH domain-containing protein 16
gi|75075716|sp|Q4R4J1.1|RBM22_MACFA RecName: Full=Pre-mRNA-splicing factor RBM22; AltName:
Full=RNA-binding motif protein 22
gi|81913160|sp|Q8BHS3.1|RBM22_MOUSE RecName: Full=Pre-mRNA-splicing factor RBM22; AltName:
Full=RNA-binding motif protein 22
gi|7022226|dbj|BAA91521.1| unnamed protein product [Homo sapiens]
gi|12053361|emb|CAB66867.1| hypothetical protein [Homo sapiens]
gi|13097297|gb|AAH03402.1| RNA binding motif protein 22 [Homo sapiens]
gi|26337089|dbj|BAC32229.1| unnamed protein product [Mus musculus]
gi|51480449|gb|AAH80205.1| RNA binding motif protein 22 [Mus musculus]
gi|60654947|gb|AAX32038.1| RNA binding motif protein 22 [synthetic construct]
gi|67971284|dbj|BAE01984.1| unnamed protein product [Macaca fascicularis]
gi|74151559|dbj|BAE38885.1| unnamed protein product [Mus musculus]
gi|74198886|dbj|BAE30665.1| unnamed protein product [Mus musculus]
gi|74212676|dbj|BAE31073.1| unnamed protein product [Mus musculus]
gi|74214020|dbj|BAE29427.1| unnamed protein product [Mus musculus]
gi|74223191|dbj|BAE40732.1| unnamed protein product [Mus musculus]
gi|117646096|emb|CAL38515.1| hypothetical protein [synthetic construct]
gi|119582115|gb|EAW61711.1| RNA binding motif protein 22, isoform CRA_b [Homo sapiens]
gi|208965472|dbj|BAG72750.1| RNA binding motif protein 22 [synthetic construct]
gi|296485163|tpg|DAA27278.1| TPA: pre-mRNA-splicing factor RBM22 [Bos taurus]
gi|380814544|gb|AFE79146.1| pre-mRNA-splicing factor RBM22 [Macaca mulatta]
gi|383419867|gb|AFH33147.1| pre-mRNA-splicing factor RBM22 [Macaca mulatta]
gi|384948134|gb|AFI37672.1| pre-mRNA-splicing factor RBM22 [Macaca mulatta]
gi|410207524|gb|JAA00981.1| RNA binding motif protein 22 [Pan troglodytes]
gi|410255988|gb|JAA15961.1| RNA binding motif protein 22 [Pan troglodytes]
gi|410291244|gb|JAA24222.1| RNA binding motif protein 22 [Pan troglodytes]
gi|410354161|gb|JAA43684.1| RNA binding motif protein 22 [Pan troglodytes]
Length = 420
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSFRADYG 126
N ++ + +G
Sbjct: 288 FNKLIVNGRRLNVKWG 303
>gi|417400642|gb|JAA47250.1| Putative pre-mrna-splicing factor rbm22 [Desmodus rotundus]
Length = 420
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSFRADYG 126
N ++ + +G
Sbjct: 288 FNKLIVNGRRLNVKWG 303
>gi|355691758|gb|EHH26943.1| hypothetical protein EGK_17030 [Macaca mulatta]
Length = 421
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 229 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 288
Query: 111 LNGTVIGKQSFRADYG 126
N ++ + +G
Sbjct: 289 FNKLIVNGRRLNVKWG 304
>gi|301765526|ref|XP_002918204.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Ailuropoda
melanoleuca]
Length = 454
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 262 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 321
Query: 111 LNGTVIGKQSFRADYG 126
N ++ + +G
Sbjct: 322 FNKLIVNGRRLNVKWG 337
>gi|355750335|gb|EHH54673.1| hypothetical protein EGM_15557 [Macaca fascicularis]
Length = 421
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 229 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 288
Query: 111 LNGTVIGKQSFRADYG 126
N ++ + +G
Sbjct: 289 FNKLIVNGRRLNVKWG 304
>gi|12858161|dbj|BAB31220.1| unnamed protein product [Mus musculus]
Length = 420
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSFRADYG 126
N ++ + +G
Sbjct: 288 FNKLIVNGRRLNVKWG 303
>gi|74195542|dbj|BAE39585.1| unnamed protein product [Mus musculus]
Length = 420
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSFRADYG 126
N ++ + +G
Sbjct: 288 FNKLIVNGRRLNVKWG 303
>gi|61371511|gb|AAX43680.1| RNA binding motif protein 22 [synthetic construct]
Length = 421
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSFRADYG 126
N ++ + +G
Sbjct: 288 FNKLIVNGRRLNVKWG 303
>gi|431918047|gb|ELK17275.1| Pre-mRNA-splicing factor RBM22 [Pteropus alecto]
gi|440904796|gb|ELR55260.1| Pre-mRNA-splicing factor RBM22 [Bos grunniens mutus]
Length = 424
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 232 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 291
Query: 111 LNGTVIGKQSFRADYG 126
N ++ + +G
Sbjct: 292 FNKLIVNGRRLNVKWG 307
>gi|354488436|ref|XP_003506375.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Cricetulus griseus]
Length = 431
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 239 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 298
Query: 111 LNGTVIGKQSFRADYGN 127
N ++ + +G
Sbjct: 299 FNKLIVNGRRLNVKWGR 315
>gi|432098820|gb|ELK28315.1| Pre-mRNA-splicing factor RBM22 [Myotis davidii]
Length = 385
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 193 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 252
Query: 111 LNGTVIGKQSFRADYGN 127
N ++ + +G
Sbjct: 253 FNKLIVNGRRLNVKWGR 269
>gi|302694831|ref|XP_003037094.1| hypothetical protein SCHCODRAFT_84062 [Schizophyllum commune H4-8]
gi|300110791|gb|EFJ02192.1| hypothetical protein SCHCODRAFT_84062 [Schizophyllum commune H4-8]
Length = 435
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 54/91 (59%), Gaps = 7/91 (7%)
Query: 45 QGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQ 97
QG Q++ D++N +FVG L P V D+ L + FS +G ++ ++ +G GF+
Sbjct: 95 QGQQNKEDTTNHYHVFVGDLSPEVNDDVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLA 154
Query: 98 FANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
F ++ +AE+A+ +NG +G ++ R ++ NQ
Sbjct: 155 FRDKTDAEQAIATMNGEWLGSRAIRVNWANQ 185
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
NTT++VG L P T DL F G ++ +++ +G FV+ E+A A+ +L G
Sbjct: 244 NTTVYVGNLVPYCTQADLIPLFQTIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQ 303
Query: 115 VIGKQSFRADYG 126
++ + + +G
Sbjct: 304 MVHGRPIKCSWG 315
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-------GKGCGFVQFANRENAEEALHK 110
++VG L P VT+ L + F+ G + VKI G GFV++ + AE AL
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYLDMRAAETALQT 77
Query: 111 LNGTVIGKQSFRADYGNQ 128
LNG I R ++ Q
Sbjct: 78 LNGRRIFDTEIRVNWAYQ 95
>gi|194384782|dbj|BAG59551.1| unnamed protein product [Homo sapiens]
Length = 371
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 179 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 238
Query: 111 LNGTVIGKQSFRADYG 126
N ++ + +G
Sbjct: 239 FNKLIVNGRRLNVKWG 254
>gi|197098656|ref|NP_001125624.1| pre-mRNA-splicing factor RBM22 [Pongo abelii]
gi|75070751|sp|Q5RAY5.1|RBM22_PONAB RecName: Full=Pre-mRNA-splicing factor RBM22; AltName:
Full=RNA-binding motif protein 22
gi|55728671|emb|CAH91075.1| hypothetical protein [Pongo abelii]
Length = 420
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSFRADYG 126
N ++ + +G
Sbjct: 288 FNKLIVNGRRLNVKWG 303
>gi|164657762|ref|XP_001730007.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
gi|159103901|gb|EDP42793.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
Length = 638
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 17/106 (16%)
Query: 43 PGQGPQSEGDSS-----------NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG- 90
P +GPQ +S + T+F+GGL +T++D+ F+++GE+ V++P
Sbjct: 471 PARGPQDRAESRAKHFKDERSAPSNTLFIGGLAWALTEDDIWNAFAEFGEVTGVRLPKEI 530
Query: 91 -----KGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQWSG 131
KG G+V+F +++NA +AL +NG +G + R D+ + G
Sbjct: 531 DSGRPKGFGYVEFVSQDNAAKALETMNGQALGGRPIRIDFAGKRDG 576
>gi|281345654|gb|EFB21238.1| hypothetical protein PANDA_006585 [Ailuropoda melanoleuca]
Length = 376
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 184 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 243
Query: 111 LNGTVIGKQSFRADYGN 127
N ++ + +G
Sbjct: 244 FNKLIVNGRRLNVKWGR 260
>gi|398341593|ref|ZP_10526296.1| RNA recognition motif-containing protein [Leptospira inadai serovar
Lyme str. 10]
gi|398346075|ref|ZP_10530778.1| RNA recognition motif-containing protein [Leptospira broomii str.
5399]
Length = 86
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 43/70 (61%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N +FVG L+ +V ++ + FS YGE+A VKI GKG GFV+ AN + AE A + LNGT
Sbjct: 3 NRKLFVGNLNYSVGHSEINELFSNYGEVAFVKIIEGKGFGFVEMANEQQAENAKNSLNGT 62
Query: 115 VIGKQSFRAD 124
++ D
Sbjct: 63 EFKGRTLNVD 72
>gi|338713130|ref|XP_001917686.2| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor RBM22-like
[Equus caballus]
Length = 421
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSFRADYG 126
N ++ + +G
Sbjct: 288 FNKLIVNGRRLNVKWG 303
>gi|426229914|ref|XP_004009028.1| PREDICTED: pre-mRNA-splicing factor RBM22 isoform 2 [Ovis aries]
Length = 417
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSFRADYG 126
N ++ + +G
Sbjct: 288 FNKLIVNGRRLNVKWG 303
>gi|115473341|ref|NP_001060269.1| Os07g0615400 [Oryza sativa Japonica Group]
gi|23237933|dbj|BAC16506.1| putative oligouridylate binding protein [Oryza sativa Japonica
Group]
gi|113611805|dbj|BAF22183.1| Os07g0615400 [Oryza sativa Japonica Group]
gi|215737207|dbj|BAG96136.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767365|dbj|BAG99593.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637457|gb|EEE67589.1| hypothetical protein OsJ_25126 [Oryza sativa Japonica Group]
Length = 427
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 21/143 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQG-------------GYASNGAPGQGP 47
+ ++NG + SR +R AT S+G QQ S+ A+ AP P
Sbjct: 208 INDLNGQWLGSRQIRCNWATKGASNGEQQTSDSKNVADLTNNLTEDGKEKANEDAPENNP 267
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE--IASVKIPVGKGCGFVQFANRENAE 105
Q T++VG L VT + L + F G I V+I +GKG GFV+++N A
Sbjct: 268 QYR------TVYVGNLAHEVTQDVLHRLFHALGAGAIEEVRIQLGKGFGFVRYSNHAEAA 321
Query: 106 EALHKLNGTVIGKQSFRADYGNQ 128
A+ NG ++G + + +GN+
Sbjct: 322 LAIQMGNGRILGGKPIKCSWGNK 344
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANR 101
Q E + + IFVG L P VTD L FS Y + ++ +G GFV F N+
Sbjct: 142 QREDTTDHFNIFVGDLSPEVTDSALFAFFSGYSSCSDARVMWDQKTGRSRGYGFVSFRNQ 201
Query: 102 ENAEEALHKLNGTVIGKQSFRADYGNQ 128
++A+ A++ LNG +G + R ++ +
Sbjct: 202 QDAQSAINDLNGQWLGSRQIRCNWATK 228
>gi|344250874|gb|EGW06978.1| Pre-mRNA-splicing factor RBM22 [Cricetulus griseus]
Length = 241
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 93 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 152
Query: 111 LNGTVIGKQSFRADYGN 127
N ++ + +G
Sbjct: 153 FNKLIVNGRRLNVKWGR 169
>gi|355715639|gb|AES05392.1| RNA binding motif protein 22 [Mustela putorius furo]
Length = 393
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 235 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 294
Query: 111 LNGTVIGKQSFRADYG 126
N ++ + +G
Sbjct: 295 FNKLIVNGRRLNVKWG 310
>gi|351702162|gb|EHB05081.1| Pre-mRNA-splicing factor RBM22 [Heterocephalus glaber]
Length = 420
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSFRADYGN 127
N ++ + +G
Sbjct: 288 FNKLIVNGRRLNVKWGR 304
>gi|147838149|emb|CAN74140.1| hypothetical protein VITISV_008914 [Vitis vinifera]
Length = 544
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 5/75 (6%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANRENAEE 106
D+ T +++ LDP+VT+E LR+ F ++G+IAS+ I + +G GFV F + E+A+
Sbjct: 207 DAKYTNLYIKNLDPDVTEEALREKFFEFGKIASLVISKDENGMSRGFGFVNFESPEDAKR 266
Query: 107 ALHKLNGTVIGKQSF 121
AL LNG +G +
Sbjct: 267 ALEALNGLQLGSKVL 281
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEE 106
D+ + L ++ + L+ F ++G I S K+ V KG GFVQF + E A
Sbjct: 116 DAELYFLVCLNLSDSIDNVRLQAMFQKFGNILSCKVVVTEDGKSKGYGFVQFESEEYANA 175
Query: 107 ALHKLNGTVI-GKQSF 121
A+ KLNG +I GKQ +
Sbjct: 176 AIEKLNGFIIDGKQIY 191
Score = 39.3 bits (90), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 9/108 (8%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKI----PVGKGC--GFVQFANRENAEEALHK 110
+++VG L P++TD L FS++ +ASV+I G+ G+V F + ++A A+
Sbjct: 13 SLYVGDLHPDITDGLLFDAFSEFKSLASVRICRDSSSGRSLCYGYVNFISPQDASHAIEA 72
Query: 111 LNGTVIGKQSFRADYGNQWSGAY---YGGQVYDGYGYAIPPPNDPSMY 155
N T++ + R + ++ A G Y +A+ D +Y
Sbjct: 73 KNHTMLHGKVIRVMWSHRDPDARRSGIGNVFVKVYLFAVTSIIDAELY 120
>gi|146197835|dbj|BAF57630.1| TLS-associated protein [Dugesia japonica]
Length = 201
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 6/80 (7%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEA 107
S+TTI+VG + ++ ++L++ F +YG I + +PV KG FVQF + +AEE+
Sbjct: 4 SSTTIYVGNIPEDLRRDELKRIFGRYGNIVAATLPVDYYSGIPKGFAFVQFEDIRDAEES 63
Query: 108 LHKLNGTVIGKQSFRADYGN 127
+L G IGK+S R ++
Sbjct: 64 FDRLQGYRIGKRSLRLEFAT 83
>gi|324507276|gb|ADY43089.1| RNA-binding motif, single-stranded-interacting protein 1 [Ascaris
suum]
Length = 673
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 47 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFAN 100
P S+ S+T +++ GLDPN TDEDLRQ QYG I S K + KG GFV F +
Sbjct: 291 PHSDAPLSSTNVYIRGLDPNTTDEDLRQKCDQYGVILSTKAIMDKATGQCKGYGFVDFES 350
Query: 101 RENAEEALHKLN 112
E A A+ LN
Sbjct: 351 AEAAMRAVEGLN 362
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANRE 102
Q E D +N ++ L N T++DL++ ++G + S +I +G GF + +E
Sbjct: 378 QQEQDPTN--LYFANLPANFTEQDLQKTLERFGMVISTRILKNQDGASRGVGFARMDKKE 435
Query: 103 NAEEALHKLNGTVI 116
++ + ++NG +I
Sbjct: 436 LCDQIIREMNGKLI 449
>gi|168016725|ref|XP_001760899.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687908|gb|EDQ74288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 155
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEA 107
S + +FVGGL TD+++++ FS +GE+ VKI +G GFV FA ++AE A
Sbjct: 40 SGSKLFVGGLAWGTTDDNIKEAFSAFGEVTEVKIICDRDTGRSRGFGFVTFATDQDAEAA 99
Query: 108 LHKLNGTVIGKQSFRADYGNQWS 130
L L+G + ++ R +Y + S
Sbjct: 100 LQALDGRDLAGRTIRVNYATKQS 122
>gi|213983047|ref|NP_001135684.1| U2 snRNP-associated SURP domain containing [Xenopus (Silurana)
tropicalis]
gi|197245900|gb|AAI68618.1| Unknown (protein for MGC:186104) [Xenopus (Silurana) tropicalis]
Length = 970
Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD S T +++G ++P + +E L Q F ++G +ASVKI + CGFV
Sbjct: 206 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFV 265
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADYG 126
F NR +AE AL LNG ++ + +G
Sbjct: 266 AFMNRRDAERALKNLNGKMVMNFEMKLGWG 295
>gi|91086169|ref|XP_970456.1| PREDICTED: similar to TIA-1 homolog [Tribolium castaneum]
gi|270010230|gb|EFA06678.1| hypothetical protein TcasGA2_TC009608 [Tribolium castaneum]
Length = 364
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 40 NGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 92
N A G Q + D+SN IFVG L P + E LR+ F+ +GEI++ +I KG
Sbjct: 79 NWATSPGNQPKQDTSNHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTLKSKG 138
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
FV F + AE A+ +NG +G +S R ++ +
Sbjct: 139 YAFVSFVKKAEAENAIQAMNGQWLGSRSIRTNWSTR 174
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 14/130 (10%)
Query: 4 MNGVYCSSRPMRIGAAT-----PRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTI 58
MNG + SR +R +T P+ Q+ N + +N T+
Sbjct: 157 MNGQWLGSRSIRTNWSTRKPPPPKTEKAAQRAKQPTFDEVYN---------QSSPTNCTV 207
Query: 59 FVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGK 118
+ GG +T++ +++ FSQ+G I +++ KG F++FA +E+A A+ ++ T I
Sbjct: 208 YCGGFTTGLTEDLMQKTFSQFGVIQDIRVFKDKGYAFIKFATKESATHAIETIHNTEING 267
Query: 119 QSFRADYGNQ 128
Q + +G +
Sbjct: 268 QMVKCFWGKE 277
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 108
+S T++VG LDP+V+++ L FSQ G + KI P FV+F N ++A AL
Sbjct: 4 ESHPKTLYVGNLDPSVSEDLLCTLFSQIGPVKGCKIIREPGNDPYAFVEFTNHQSASTAL 63
Query: 109 HKLNGTVIGKQSFRADY----GNQ 128
+N + + + ++ GNQ
Sbjct: 64 AAMNKRLFLDKEMKVNWATSPGNQ 87
>gi|440800608|gb|ELR21644.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 417
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-GKGCGFVQFANRENAEEALHKLN 112
NT +F+G LDP++T LR+ F Q+G I + V + GFV+F +R++AE A ++N
Sbjct: 140 KNTNLFIGDLDPSITSAQLREVFRQFGPIYEEETFVKNRNYGFVRFRHRKHAEMAKREMN 199
Query: 113 GTVIGKQSFRADYGN 127
V+G ++ R +G+
Sbjct: 200 NKVLGARAIRIGWGD 214
Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 8/107 (7%)
Query: 36 GYASNGAPGQGPQS-EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK--- 91
G S+G+ P++ E + +F+G L + ++ LR+ F +G + SV+I +
Sbjct: 42 GDLSSGSLDSLPEAGEFEDDERCLFIGDLARGLNEDQLREAFDPFG-VISVEIKRDRVTN 100
Query: 92 ---GCGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQWSGAYYG 135
G GFV +RE+A A ++ V+G ++ R + + + + G
Sbjct: 101 YSLGYGFVLLKSREDAGAAKKAMHRQVVGGRAIRIGWAQKNTNLFIG 147
>gi|21388662|dbj|BAC00787.1| glycine-rich RNA-binding protein [Physcomitrella patens]
Length = 155
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEA 107
S + +FVGGL TD+++++ FS +GE+ VKI +G GFV FA ++AE A
Sbjct: 40 SGSKLFVGGLAWGTTDDNIKEAFSAFGEVTEVKIICDRDTGRSRGFGFVTFATDQDAEAA 99
Query: 108 LHKLNGTVIGKQSFRADYGNQWS 130
L L+G + ++ R +Y + S
Sbjct: 100 LQALDGRDLAGRTIRVNYATKQS 122
>gi|195027159|ref|XP_001986451.1| GH20523 [Drosophila grimshawi]
gi|193902451|gb|EDW01318.1| GH20523 [Drosophila grimshawi]
Length = 969
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD + T +++G L+P ++++ L + F +YG +AS+KI G+ CGFV
Sbjct: 208 GSFDTGDPNTTNLYLGNLNPKISEQQLMEIFGRYGPLASIKIMWPRSEEEKQRGRNCGFV 267
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ +R++AE AL LNG I R +G
Sbjct: 268 AYMSRKDAERALRTLNGRYIMGYEMRLGWG 297
>gi|407927556|gb|EKG20446.1| hypothetical protein MPH_02256 [Macrophomina phaseolina MS6]
Length = 485
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 11/108 (10%)
Query: 27 YQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVK 86
+Q + Y SN P E S++ IFVG L V DE L Q FS +G+++ +
Sbjct: 156 HQSEIRVNWAYQSNNQP-----KEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGQVSEAR 210
Query: 87 IPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
+ +G GFV F +R +AE+AL ++G +G ++ R ++ NQ
Sbjct: 211 VMWDMKTGRSRGYGFVAFRDRGDAEKALSSMDGEWLGSRAIRCNWANQ 258
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 55/121 (45%), Gaps = 16/121 (13%)
Query: 16 IGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQP 75
I A SG +S GGY AP + + ++VGGLDP +T++ LRQ
Sbjct: 55 IPTAISSPMSGSVMSPTSAGGYVRRAAP--------EPNKRALYVGGLDPRITEDVLRQI 106
Query: 76 FSQYGEIASVKI--------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYGN 127
F G + SVKI G GFV++ + AE A+ LNG + + R ++
Sbjct: 107 FETAGHVVSVKIIPDKNKFQSKGLNYGFVEYDDPGTAERAMQTLNGRRVHQSEIRVNWAY 166
Query: 128 Q 128
Q
Sbjct: 167 Q 167
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 59/139 (42%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR--KSSGYQQQYSSQG-----GYASNGAPGQGPQS---- 49
++ M+G + SR +R A + S QQ +S G Y + P G QS
Sbjct: 238 LSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMASMGMTPTTPYGHHHFPTHGVQSYEMV 297
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T DL F +G + + +G F++ ENA A
Sbjct: 298 VNQTPQWQTTCYVGNLTPYTTQSDLVPLFQNFGYVVETRFQSDRGFAFIKMDTHENAAMA 357
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ +LNG + + + +G
Sbjct: 358 ICQLNGYNVNGRPLKCSWG 376
>gi|255073423|ref|XP_002500386.1| predicted protein [Micromonas sp. RCC299]
gi|226515649|gb|ACO61644.1| predicted protein, partial [Micromonas sp. RCC299]
Length = 312
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
D S TT++VGG+D VT++ L+ F QYG+I+SV+ K C FV F +R AE+A
Sbjct: 230 ADESITTLYVGGIDDRVTEDALKDAFYQYGQISSVRTLYAKNCAFVTFVDRAGAEKA 286
>gi|356502327|ref|XP_003519971.1| PREDICTED: polyadenylate-binding protein 5-like [Glycine max]
Length = 616
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEALHK 110
T ++V LD N+ D+ L++ FS++G I S K+ + KG GFV F+ NA ALH+
Sbjct: 288 TNLYVKNLDYNINDDKLKELFSEFGTITSCKVMLEPNGRSKGYGFVAFSAPRNANRALHE 347
Query: 111 LNGTVIGKQ 119
+NG +IG++
Sbjct: 348 MNGKMIGRR 356
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEALHKLN 112
+F+ LD ++ ++ L F+ +G + S K+ V KG GFVQF N E+A+ A+ +LN
Sbjct: 95 VFIKNLDISIDNKTLHDTFAAFGFVLSSKVAVDSIGQSKGYGFVQFDNEESAQNAIKELN 154
Query: 113 GTVIGKQS 120
G +I +
Sbjct: 155 GMLINDKK 162
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 53/121 (43%), Gaps = 26/121 (21%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ E+NG+ + + + +G R+ Q +G T ++V
Sbjct: 150 IKELNGMLINDKKVYVGLFVNRQERA---------------------QVDGSPKFTNVYV 188
Query: 61 GGLDPNVTDEDLRQPFSQYGEIAS---VKIPVGKG-C-GFVQFANRENAEEALHKLNGTV 115
TDEDL Q FS YG I S +K GK C GFV F + ++A A+ +LNGT
Sbjct: 189 KNFSETYTDEDLEQLFSTYGTITSAVVMKDTDGKSRCFGFVNFESPDSAVAAVERLNGTT 248
Query: 116 I 116
+
Sbjct: 249 V 249
>gi|159478857|ref|XP_001697517.1| predicted protein [Chlamydomonas reinhardtii]
gi|158274396|gb|EDP00179.1| predicted protein [Chlamydomonas reinhardtii]
Length = 1010
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 43/135 (31%), Positives = 62/135 (45%), Gaps = 27/135 (20%)
Query: 41 GAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGK 91
GA G G GD T ++VG L +E L++ F ++G IASVK+ G+
Sbjct: 202 GAMG-GSFDHGDPFTTNLYVGNLSQETDEEVLKREFGRFGAIASVKVMWPRDEEQRRKGR 260
Query: 92 GCGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPND 151
CGFV F R++AE A+ KL G ++ +G +++ G+G AIP P
Sbjct: 261 NCGFVGFMKRDDAEMAMRKLQGIIL-----------------HGNELHIGWGKAIPLPAI 303
Query: 152 PSMYAAAAAAYGAYP 166
P A A P
Sbjct: 304 PIYDPREGAVVSAIP 318
>gi|449664731|ref|XP_002156267.2| PREDICTED: nucleolysin TIA-1 isoform p40-like [Hydra
magnipapillata]
Length = 361
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEA 107
++ TIFVG LD ++TD +LRQ F +GEI + K+ K GF+ F N+ +AE A
Sbjct: 69 ASITIFVGDLDDDLTDSELRQAFEPFGEILNAKVVRDAATEKSKNYGFISFTNKPDAERA 128
Query: 108 LHKLNGTVIGKQSFRADYGNQ 128
+ ++G ++ ++ + ++ +
Sbjct: 129 IRDMHGAMLKRRPIKTNWATR 149
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 58/140 (41%), Gaps = 13/140 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M+G RP++ AT ++S Q Q E SN T++V
Sbjct: 129 IRDMHGAMLKRRPIKTNWATRNQNSKPSQLDYDQVF------------KEVSESNCTVYV 176
Query: 61 GGLDPNVTDEDLRQPFSQYGEIA-SVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQ 119
L ++DE L + F G+I + ++ GK F++F + A A+ K NG+ +
Sbjct: 177 TNLPDRISDEVLVKHFEDCGKIVGTPRVFDGKNFAFIRFESHAAATTAIVKGNGSELNGA 236
Query: 120 SFRADYGNQWSGAYYGGQVY 139
+ +G GG Y
Sbjct: 237 ILKCWWGKDSESHQAGGDSY 256
>gi|328701605|ref|XP_001946045.2| PREDICTED: u2 snRNP-associated SURP motif-containing protein-like
[Acyrthosiphon pisum]
Length = 938
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 9/91 (9%)
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGF 95
+G GD + T +++G L+P +T+ L + F +YG +AS+KI G+ CGF
Sbjct: 178 KGSFDSGDPNTTNLYLGNLNPKITEAQLMEVFGKYGPLASIKIMWPRSDEEKARGRNCGF 237
Query: 96 VQFANRENAEEALHKLNGTVIGKQSFRADYG 126
V + +R++ E AL LNG + + +G
Sbjct: 238 VAYMSRKDGERALKNLNGKDVMSYEMKMGWG 268
>gi|432097247|gb|ELK27586.1| RNA binding protein fox-1 like protein 2, partial [Myotis davidii]
Length = 367
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 62/135 (45%), Gaps = 27/135 (20%)
Query: 32 SSQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP 88
+++GG ++G P Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 75 TTEGGAQTDGQPSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEII 134
Query: 89 VG----KGCGFVQFANRENAEEALHKLNGTVIGKQSFRAD---------------YGNQW 129
KG GFV F N +A+ A KL+GTV+ + + Y N W
Sbjct: 135 FNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGW 194
Query: 130 S-----GAYYGGQVY 139
GA YG ++Y
Sbjct: 195 KLSPVVGAVYGPELY 209
>gi|189233691|ref|XP_969160.2| PREDICTED: similar to AGAP005292-PA [Tribolium castaneum]
Length = 358
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 47 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFAN 100
P S + + IFVG L P + + LR+ F+ +GEI+ ++ KG GFV F
Sbjct: 42 PSSNNKAEHHHIFVGDLSPEIETQTLREAFAAFGEISDCRVVRDPQTLKSKGYGFVSFIK 101
Query: 101 RENAEEALHKLNGTVIGKQSFRADYGNQ 128
+ AE A++ +NG +G +S R ++ +
Sbjct: 102 KAEAESAINAMNGQWLGSRSIRTNWATR 129
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 66/127 (51%), Gaps = 11/127 (8%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQ--SEGDSSNTTIFVG 61
MNG + SR +R AT RK + + +N P + ++ ++N T++ G
Sbjct: 112 MNGQWLGSRSIRTNWAT-RKPPAPKSE--------ANSKPMSFDEIYNQSSATNCTVYCG 162
Query: 62 GLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSF 121
G+ + ++ L++ F YG I +++ KG F++F+ +E+A A+ ++ + IG Q+
Sbjct: 163 GITNGLCEDLLQKTFLPYGIIQEIRVFKEKGYAFIRFSTKESATHAIVGVHNSEIGGQTV 222
Query: 122 RADYGNQ 128
+ +G +
Sbjct: 223 KCSWGKE 229
>gi|260830806|ref|XP_002610351.1| hypothetical protein BRAFLDRAFT_145268 [Branchiostoma floridae]
gi|229295716|gb|EEN66361.1| hypothetical protein BRAFLDRAFT_145268 [Branchiostoma floridae]
Length = 435
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D S TT+++GGL +T++DLR F Q+GEI S+ + + C F+QF +R AE A +
Sbjct: 228 DRSITTLYIGGLGDKITEQDLRDHFYQFGEIRSITMVARQQCAFIQFTSRPAAEMAAERT 287
Query: 111 LNGTVIGKQSFRADYG 126
N +I + +G
Sbjct: 288 FNKLIINGRRLSVRWG 303
>gi|83715976|ref|NP_001032907.1| pre-mRNA-splicing factor RBM22 [Bos taurus]
gi|115502617|sp|Q3B7L8.1|RBM22_BOVIN RecName: Full=Pre-mRNA-splicing factor RBM22; AltName:
Full=RNA-binding motif protein 22
gi|78174395|gb|AAI07552.1| RNA binding motif protein 22 [Bos taurus]
Length = 420
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSFRADYG 126
N ++ + +G
Sbjct: 288 FNKFIVNGRRLNVKWG 303
>gi|324510042|gb|ADY44204.1| Nucleolysin TIAR [Ascaris suum]
Length = 367
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 65/123 (52%), Gaps = 8/123 (6%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGL 63
MNG R +R A+ RK + ++ ++ + + + + NT+++VG +
Sbjct: 195 MNGQLIGRRQIRTNWAS-RKPASAEEAHTKEQTFDEVF-------NATRADNTSVYVGNV 246
Query: 64 DPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRA 123
+ T+EDLR+ F+ G I+ V+I +G FV++A +E A A+ ++NG I Q+ +
Sbjct: 247 HSSTTEEDLREAFASIGAISEVRIFKQQGYAFVRYATKEAATRAIMQMNGKEINGQNIKC 306
Query: 124 DYG 126
+G
Sbjct: 307 SWG 309
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 111
+FVG L + + L+ F+ YGEI+ K+ KG GFV F ++E+AE+A+ +
Sbjct: 136 VFVGDLATEIDNNALKAAFAAYGEISEAKVIRDPQTMKSKGYGFVSFPSKESAEKAIAGM 195
Query: 112 NGTVIGKQSFRADYGNQ 128
NG +IG++ R ++ ++
Sbjct: 196 NGQLIGRRQIRTNWASR 212
>gi|119495558|ref|XP_001264561.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Neosartorya fischeri NRRL 181]
gi|119412723|gb|EAW22664.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Neosartorya fischeri NRRL 181]
Length = 477
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E SS+ IFVG L V DE L Q FS +G ++ ++ +G GFV F R +
Sbjct: 177 EDTSSHFHIFVGDLSNEVNDEILLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERAD 236
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
AE+AL+ ++G +G ++ R ++ NQ
Sbjct: 237 AEKALNAMDGEWLGSRAIRCNWANQ 261
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 55/120 (45%), Gaps = 15/120 (12%)
Query: 16 IGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQP 75
I A SG +S GGY AP + + ++VGGLDP VT++ L+Q
Sbjct: 59 IPTAITSPMSGNMMSPTSAGGYVRRAAP--------EPNKRALYVGGLDPRVTEDILKQI 110
Query: 76 FSQYGEIASVKIPVGKGC-------GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
F G + SVKI K GFV+F + AE A+ LNG I + R ++ Q
Sbjct: 111 FETTGHVQSVKIIPDKNFNSKGYNYGFVEFDDPGAAERAMQTLNGRRIHQSEIRVNWAYQ 170
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGG------YASNGAPGQGPQS---- 49
+ M+G + SR +R A + + S QQQ + G + + P G QS
Sbjct: 241 LNAMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMV 300
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T DL F +G + ++ +G F++ ENA A
Sbjct: 301 VQQTPQWQTTCYVGNLTPYTTQNDLVPLFHNFGYVLETRLQADRGFAFIKMDTHENAAMA 360
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ +LNG + + + +G
Sbjct: 361 ICQLNGYNVNGRPLKCSWG 379
>gi|392927018|ref|NP_509705.3| Protein TIAR-3 [Caenorhabditis elegans]
gi|211970450|emb|CAB01717.3| Protein TIAR-3 [Caenorhabditis elegans]
Length = 450
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 11/123 (8%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGL 63
MNG + R +R A + S + + + + + S A NT+++VG +
Sbjct: 286 MNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKA-----------DNTSVYVGNI 334
Query: 64 DPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRA 123
TD DLR FS YG+IA V+I + FV++ +E A +A+ ++NG + R
Sbjct: 335 SQQTTDADLRDLFSTYGDIAEVRIFKTQRYAFVRYEKKECATKAIMEMNGKEMAGNQVRC 394
Query: 124 DYG 126
+G
Sbjct: 395 SWG 397
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 6/75 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 111
+FVG L +V++E L+ F+++GE++ K+ KG GFV F N++NAE A+ +
Sbjct: 227 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGM 286
Query: 112 NGTVIGKQSFRADYG 126
NG IGK++ R ++
Sbjct: 287 NGKWIGKRAVRTNWA 301
>gi|363754371|ref|XP_003647401.1| hypothetical protein Ecym_6201 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891038|gb|AET40584.1| hypothetical protein Ecym_6201 [Eremothecium cymbalariae
DBVPG#7215]
Length = 448
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 64/131 (48%), Gaps = 18/131 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ EM G RP+ + +T + +S ++ + + G P Q + T+F+
Sbjct: 269 IKEMQGKEIDGRPINVDMSTSKPASNPKEDRAKKFG----DVPSQ--------PSDTLFL 316
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEALHKLNGT 114
G L N +++ + F YG I SV+IP KG G+VQ+A+ E A++AL KL G
Sbjct: 317 GNLSFNADRDNIFELFKDYGSIISVRIPTHPETNQPKGFGYVQYASIEEAQKALDKLQGE 376
Query: 115 VIGKQSFRADY 125
I + R D+
Sbjct: 377 YIDNRPVRLDF 387
>gi|308480880|ref|XP_003102646.1| hypothetical protein CRE_03259 [Caenorhabditis remanei]
gi|308261080|gb|EFP05033.1| hypothetical protein CRE_03259 [Caenorhabditis remanei]
Length = 358
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 6/75 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEALHKL 111
+FVG L +V++E L+ F +YGE++ K+ KG GFV F N++NAE A+ +
Sbjct: 135 VFVGDLSKDVSNELLKSTFQKYGEVSEAKVIRDAQTQKSKGYGFVSFPNKQNAENAIAGM 194
Query: 112 NGTVIGKQSFRADYG 126
NG IGK++ R ++
Sbjct: 195 NGKWIGKRAVRTNWA 209
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 11/123 (8%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGL 63
MNG + R +R A + S + + + + + S A NT+++VG +
Sbjct: 194 MNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKA-----------DNTSVYVGNI 242
Query: 64 DPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRA 123
T+ DLR+ FS YG+IA V++ + FV++ +E A +A+ ++NG + R
Sbjct: 243 SQQTTETDLRESFSTYGDIAEVRVFKTQRYAFVRYDKKECATKAIMEMNGKELTGNQVRC 302
Query: 124 DYG 126
+G
Sbjct: 303 SWG 305
>gi|320166721|gb|EFW43620.1| Rbm22 protein [Capsaspora owczarzaki ATCC 30864]
Length = 409
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK 110
D S TT++VG LD +++++DLR F Q+GEI S+ I C FV F R AE A +
Sbjct: 270 ADKSITTLYVGNLDDSISEDDLRDYFYQFGEIRSITISRKAACAFVAFTTRLFAEAAAER 329
Query: 111 -LNGTVIGKQSFRADYGN 127
N +I + + +G
Sbjct: 330 SYNKAIIHDRKLKIMWGK 347
>gi|398407815|ref|XP_003855373.1| hypothetical protein MYCGRDRAFT_35430 [Zymoseptoria tritici IPO323]
gi|339475257|gb|EGP90349.1| hypothetical protein MYCGRDRAFT_35430 [Zymoseptoria tritici IPO323]
Length = 401
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 13/109 (11%)
Query: 27 YQQQYSSQGGYASNGAPGQGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASV 85
+QQ+ Y SN S+ D+SN IFVG L V DE L Q FS +G ++
Sbjct: 137 HQQEIRVNWAYQSNTT------SKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGTVSEA 190
Query: 86 KIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
++ +G GFV F +R +AE+AL ++G +G ++ R ++ NQ
Sbjct: 191 RVMWDMKTGRSRGYGFVAFRDRADAEKALSSMDGEWLGSRAIRCNWANQ 239
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 15/104 (14%)
Query: 32 SSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK 91
+S GG AP + + ++VGGLDP VT++ L+Q F G + +VKI K
Sbjct: 53 TSAGGLVRRAAP--------EPNKRALYVGGLDPRVTEDVLKQIFETTGHVQNVKIIPDK 104
Query: 92 GC-------GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV++ + AE A+ LNG + +Q R ++ Q
Sbjct: 105 NFQSKGFNYGFVEYDDPGAAERAMQTLNGRRVHQQEIRVNWAYQ 148
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 23/183 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGGYA-------SNGAPGQGPQS--- 49
++ M+G + SR +R A + + S QQQ Q G + P QG QS
Sbjct: 219 LSSMDGEWLGSRAIRCNWANQKGQPSFSQQQAMVQMGMTPTTPYGGHHSFPTQGAQSYEM 278
Query: 50 ---EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEE 106
+ TT +VG L P T DL F +G + + +G F++ ENA
Sbjct: 279 IVQQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVTETRFQSDRGFAFIKMDTHENAAN 338
Query: 107 ALHKLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYP 166
A+ +L+G + + + +G GQ +DG+ A P PS + +A A+ +P
Sbjct: 339 AICQLSGYQVNGRPLKCSWGKDRPPT---GQ-FDGFSPAQGP---PSGFPQSAQAF--FP 389
Query: 167 VYG 169
YG
Sbjct: 390 QYG 392
>gi|148231899|ref|NP_001080776.1| pre-mRNA-splicing factor RBM22 [Xenopus laevis]
gi|82241534|sp|Q7ZXB5.1|RBM22_XENLA RecName: Full=Pre-mRNA-splicing factor RBM22; AltName:
Full=RNA-binding motif protein 22
gi|28280011|gb|AAH45067.1| Cg14641-prov protein [Xenopus laevis]
Length = 417
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D S TT++VGGL +++ +LR F Q+GEI ++ + + C F+QFA R++AE A K
Sbjct: 228 DKSITTLYVGGLGDTISESELRNHFYQFGEIRTITVVQRQQCAFIQFATRQSAETAAEKS 287
Query: 111 LNGTVIGKQSFRADYG 126
N ++ + +G
Sbjct: 288 FNKLIVNGRRLNVKWG 303
>gi|218189840|gb|EEC72267.1| hypothetical protein OsI_05421 [Oryza sativa Indica Group]
Length = 116
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 6/76 (7%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PV---GKGCGFVQFANRENAEEALHKL 111
+F+GGL + + L+ FSQ+G I VK+ PV KG GFV+FA+ + A ALHK+
Sbjct: 39 LFIGGLSYDTNETALKDAFSQHGHIIQVKVICHPVTGKSKGYGFVKFASEDEAAAALHKM 98
Query: 112 NGTVIGKQSFRADYGN 127
G VI ++ R Y N
Sbjct: 99 GGEVIDGRNIRVHYAN 114
>gi|157114083|ref|XP_001657973.1| nucleolysin tia-1 [Aedes aegypti]
gi|108877443|gb|EAT41668.1| AAEL006710-PA [Aedes aegypti]
Length = 453
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGF 95
+PG P+++ S + IFVG L P + E LR+ F+ +GEI++ +I +G F
Sbjct: 83 SPGNQPKTD-TSQHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTLKSRGYAF 141
Query: 96 VQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
V F + AE A+ +NG +G +S R ++ +
Sbjct: 142 VSFVKKAEAENAIQMMNGQWLGSRSIRTNWSTR 174
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG-QGPQSEGDSSNTTIFVGG 62
MNG + SR +R +T RK ++ G S PG + + +NTT++ GG
Sbjct: 157 MNGQWLGSRSIRTNWST-RKPPAPRENIK---GIKSGKTPGFEEIYNNTGPTNTTVYCGG 212
Query: 63 LDPN-VTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSF 121
N + D + + F +G+I V++ KG F++F N+E+A A+ + + I +
Sbjct: 213 FPANAINDMLIHKHFGLFGQIQDVRVFKDKGYAFIKFNNKESAARAIEGTHNSEIQGYAV 272
Query: 122 RADYGNQ 128
+ +G +
Sbjct: 273 KCYWGKE 279
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC---GFVQFANRENAEEALHKLNG 113
T++VG LD +VT++ L F Q G + S KI F+++AN ++A+ AL +N
Sbjct: 9 TLYVGNLDQSVTEDLLCALFGQMGAVKSCKIIREASSDPYAFIEYANHQSAQTALAAMNK 68
Query: 114 TVIGKQSFRADY----GNQ 128
+ K+ + ++ GNQ
Sbjct: 69 RLFLKKEIKVNWATSPGNQ 87
>gi|444523963|gb|ELV13665.1| U2 snRNP-associated SURP motif-containing protein [Tupaia
chinensis]
Length = 708
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R++ + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 231 RRNMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 288
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ASVKI + CGFV F NR +AE AL LNG +I + +G
Sbjct: 289 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWG 342
>gi|332376136|gb|AEE63208.1| unknown [Dendroctonus ponderosae]
Length = 371
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 40 NGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 92
N A G Q + D+SN IFVG L P + + LR+ F+ +GEI++ +I KG
Sbjct: 79 NWATSPGNQPKTDTSNHHHIFVGDLSPEIETDTLREAFAPFGEISNCRIVRDPQTLKSKG 138
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
FV F + AE A+ +NG +G +S R ++ +
Sbjct: 139 YAFVSFVKKAEAENAIQAMNGQWLGSRSIRTNWSTR 174
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 66/132 (50%), Gaps = 18/132 (13%)
Query: 4 MNGVYCSSRPMRIGAAT-----PR--KSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNT 56
MNG + SR +R +T PR K + ++Q + Y ++ +NT
Sbjct: 157 MNGQWLGSRSIRTNWSTRKPPPPRAEKPNQSKKQITFDEVY-----------NQTSPTNT 205
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
T++ GG +TD+ + + FS++G I +++ KG F++F ++E+A A+ ++ T I
Sbjct: 206 TVYCGGFASGLTDDLVTKTFSRFGAIQDIRVFKDKGYAFIKFVSKESATHAIENIHNTEI 265
Query: 117 GKQSFRADYGNQ 128
+ + +G +
Sbjct: 266 NGHTVKCFWGKE 277
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEALHKLNG 113
T++VG LD +V ++ L FSQ G + KI P FV+F N ++A AL +N
Sbjct: 9 TLYVGNLDISVQEDLLCALFSQIGPVKGCKIIREPGNDPYAFVEFTNHQSASTALIAMNK 68
Query: 114 TVIGKQSFRADY----GNQ 128
V + + ++ GNQ
Sbjct: 69 RVFLDKEMKVNWATSPGNQ 87
>gi|339247155|ref|XP_003375211.1| Pre-mRNA-splicing factor RBM22 [Trichinella spiralis]
gi|316971466|gb|EFV55227.1| Pre-mRNA-splicing factor RBM22 [Trichinella spiralis]
Length = 331
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 52 DSSNTTIFVGGL--DPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 109
D + TTI++G + D +T++D++ F Q+GEI S+ I KGCGFVQF RE AE A
Sbjct: 230 DKTITTIYLGNIGDDNVITEDDIKNYFYQFGEIRSIVILSEKGCGFVQFTTREAAELASE 289
Query: 110 KLNGTVIGK 118
K G ++ K
Sbjct: 290 KTFGKLMIK 298
>gi|449302198|gb|EMC98207.1| hypothetical protein BAUCODRAFT_416441 [Baudoinia compniacensis
UAMH 10762]
Length = 479
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 65/135 (48%), Gaps = 17/135 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNT-TIF 59
E + C+ R M+ T +QQ+ Y SN S+ D+SN IF
Sbjct: 128 FVEYDDPQCAERAMQ----TLNGRRVHQQEIRVNWAYQSNTI------SKEDTSNHFHIF 177
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNG 113
VG L V DE L Q FS +G ++ ++ +G GFV F +R +AE+AL ++G
Sbjct: 178 VGDLSNEVNDEVLLQAFSAFGTVSEARVMWDMKTGRSRGYGFVSFRDRGDAEKALSSMDG 237
Query: 114 TVIGKQSFRADYGNQ 128
+G ++ R ++ NQ
Sbjct: 238 EWLGSRAIRCNWANQ 252
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC-------GFVQFANRENAEEALHK 110
++VGGLDP VT++ L+Q F G + SVKI K GFV++ + + AE A+
Sbjct: 84 LYVGGLDPRVTEDVLKQIFETTGHVQSVKIIPDKNFQSKGYNYGFVEYDDPQCAERAMQT 143
Query: 111 LNGTVIGKQSFRADYGNQ 128
LNG + +Q R ++ Q
Sbjct: 144 LNGRRVHQQEIRVNWAYQ 161
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 67/160 (41%), Gaps = 17/160 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQ-QYSSQGG------YASNGAPGQGPQS---- 49
++ M+G + SR +R A + Y Q Q Q G Y + P QG QS
Sbjct: 232 LSSMDGEWLGSRAIRCNWANQKGQPSYSQAQAMVQMGMTPTTPYGHHTFPTQGAQSFEMI 291
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T DL F +G + + +G FV+ ENA A
Sbjct: 292 VQQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVTETRFHSDRGFAFVKMDTHENAANA 351
Query: 108 LHKLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIP 147
+ +L+G + + + +G GQ +DGY A P
Sbjct: 352 ICQLSGYNVNGRPLKCSWGKDRPPT---GQ-FDGYSPAPP 387
>gi|300796220|ref|NP_001179985.1| nucleolysin TIAR [Bos taurus]
gi|296472594|tpg|DAA14709.1| TPA: TIA1 cytotoxic granule-associated RNA binding protein-like 1
[Bos taurus]
Length = 380
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 59/120 (49%), Gaps = 26/120 (21%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 204 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 263
Query: 115 VI---------GKQS------------FRADYGN--QWSGAYYGGQVYDGY---GYAIPP 148
I GK+S F DY QWS Y Q Y Y G+ +PP
Sbjct: 264 TIEGHVVKCYWGKESPDMTKNFQQVIRFFVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 323
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 81 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 140
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV F N+ +AE A+ + G +G + R ++ +
Sbjct: 141 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR 175
>gi|395644710|ref|ZP_10432570.1| RNP-1 like RNA-binding protein [Methanofollis liminatans DSM 4140]
gi|395441450|gb|EJG06207.1| RNP-1 like RNA-binding protein [Methanofollis liminatans DSM 4140]
Length = 86
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 45/69 (65%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
+T++VG L+ T+E L + FS YG++ S +I KG GFV+FA+ E AE+A++ LN T
Sbjct: 4 STLYVGNLNYETTEEQLSELFSAYGDVKSARIIPRKGFGFVEFASVEEAEKAMNALNETQ 63
Query: 116 IGKQSFRAD 124
++ R D
Sbjct: 64 CMGRTLRID 72
>gi|345571041|gb|EGX53856.1| hypothetical protein AOL_s00004g515 [Arthrobotrys oligospora ATCC
24927]
Length = 496
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 53/106 (50%), Gaps = 13/106 (12%)
Query: 32 SSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK 91
+S GG+ AP + + ++VGGLDP VTD+ LRQ F G + SVKI K
Sbjct: 62 TSAGGFVRRAAP--------EPNKRALYVGGLDPRVTDDILRQIFETTGHVVSVKIIPDK 113
Query: 92 GC-----GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQWSGA 132
GFV++ + AE A+ LNG + + R ++ Q S A
Sbjct: 114 NAKGFNYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSSQA 159
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E S + IFVG L V DE L+Q F+ +G I+ ++ +G GFV + R +
Sbjct: 162 EDTSHHFHIFVGDLSNEVNDELLQQAFTTFGTISEARVMWDMKTGRSRGYGFVAYRERSD 221
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
AE+AL ++G +G ++ R ++ NQ
Sbjct: 222 AEKALSAMDGEWLGSRAIRCNWANQ 246
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGG------YASNGAPGQGPQS---- 49
++ M+G + SR +R A + + S QQ +Q G + + P G QS
Sbjct: 226 LSAMDGEWLGSRAIRCNWANQKGQPSISQQSQMAQMGMTPTTPFGHHHFPTHGIQSYDMI 285
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT++VG L P T DL F +G I + +G F++ ENA A
Sbjct: 286 VQQTPQWQTTVYVGNLTPYTTQNDLLPLFQNFGYIVETRFQADRGFAFIKMDTHENAAMA 345
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ +L+G + + + +G
Sbjct: 346 ICQLSGYNVNGRPLKCSWG 364
>gi|357610697|gb|EHJ67099.1| TIA-1-related RNA binding protein [Danaus plexippus]
Length = 388
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 40 NGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 92
N A G Q + D+SN IFVG L P + LR+ F+ +GEI++ +I KG
Sbjct: 79 NWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILREAFAPFGEISNCRIVRDPQTLKSKG 138
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
FV F + +AE A+ +NG +G +S R ++ +
Sbjct: 139 YAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTR 174
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQ-PFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
+NTT++ GG NV E+L Q FSQ+G+I V++ KG F++F +E A A+ +
Sbjct: 206 TNTTVYCGGFTSNVITEELMQSTFSQFGQIQDVRVFRDKGYAFIRFTTKEAAAHAIEATH 265
Query: 113 GTVIGKQSFRADYGNQ 128
T I + + +G +
Sbjct: 266 NTEISGHTVKCFWGKE 281
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 51 GDSSN-TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEE 106
GD S+ T++VG LD +VT+E L F Q GE+ KI P F++F N +A
Sbjct: 2 GDESHPKTLYVGNLDASVTEEFLCALFGQIGEVKGCKIIREPGNDPYAFLEFTNHASAAT 61
Query: 107 ALHKLNGTVIGKQSFRADY----GNQ 128
AL +N V ++ + ++ GNQ
Sbjct: 62 ALAAMNRRVFLEKEMKVNWATSPGNQ 87
>gi|340905400|gb|EGS17768.1| putative polyadenylated RNA protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 485
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Query: 27 YQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVK 86
+Q + Y SN A E S++ IFVG L V DE L Q FS +G I+ +
Sbjct: 159 HQNEIRVNWAYQSNNA-----NKEDTSNHFHIFVGDLSNEVNDEVLWQAFSAFGSISEAR 213
Query: 87 IPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
+ +G GFV F R +AE+AL ++G +G ++ R ++ NQ
Sbjct: 214 VMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQ 261
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 39 SNGAPG-QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC---- 93
+N AP G ++ + + ++VGGLDP VT++ LRQ F G + SVKI K
Sbjct: 75 TNNAPHFPGRRAAPEPNKRALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKNHRGYN 134
Query: 94 -GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV++ + AE A+ LNG + + R ++ Q
Sbjct: 135 YGFVEYDDPGAAERAMQTLNGRRVHQNEIRVNWAYQ 170
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TT +VG L P T DL F +G + ++ +G F++ + ENA A+ +LNG +
Sbjct: 309 TTCYVGNLTPYTTQNDLVPLFQNFGYVVECRMQADRGFAFIKMDSHENAAMAICQLNGYM 368
Query: 116 IGKQSFRADYG 126
+ + + +G
Sbjct: 369 VNGRPLKCSWG 379
>gi|321462927|gb|EFX73947.1| hypothetical protein DAPPUDRAFT_215373 [Daphnia pulex]
Length = 899
Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 38/111 (34%), Positives = 54/111 (48%), Gaps = 26/111 (23%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFANR 101
GD + T I++G ++P +T++ L F +YG +ASVKI + CGFV F R
Sbjct: 170 GDPNTTNIYLGNINPKMTEQQLMDTFGKYGPLASVKIMWPRTEEEKARNRNCGFVAFMCR 229
Query: 102 ENAEEALHKLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDP 152
++AE A+ KLNG I SF G+G A+P P P
Sbjct: 230 KDAERAMKKLNGKDI--LSFEMKL---------------GWGKALPIPARP 263
>gi|297687497|ref|XP_002821249.1| PREDICTED: nucleolysin TIAR isoform 4 [Pongo abelii]
Length = 396
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 78/181 (43%), Gaps = 40/181 (22%)
Query: 1 MTEMNGVYCSSRPMRIGAAT--PRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTI 58
+ M G + R +R AT P Q+ + Q + + ++ N T+
Sbjct: 166 IVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRF-------EDVVNQSSPKNCTV 218
Query: 59 FVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI-- 116
+ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT I
Sbjct: 219 YCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEG 278
Query: 117 -------GKQS-----------------FRADYGN--QWSGAYYGGQVYDGY---GYAIP 147
GK+S F+ DY QWS Y Q Y Y G+ +P
Sbjct: 279 HVVKCYWGKESPDMTKNFQQVIQFFIALFKVDYSQWGQWSQVYGNPQQYGQYMANGWQVP 338
Query: 148 P 148
P
Sbjct: 339 P 339
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEE 106
S + +FVG L P +T ED++ F+ +G+I+ ++ KG GFV F N+ +AE
Sbjct: 105 SDHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAEN 164
Query: 107 ALHKLNGTVIGKQSFRADYGNQ 128
A+ + G +G + R ++ +
Sbjct: 165 AIVHMGGQWLGGRQIRTNWATR 186
>gi|194743216|ref|XP_001954096.1| GF16912 [Drosophila ananassae]
gi|190627133|gb|EDV42657.1| GF16912 [Drosophila ananassae]
Length = 415
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANR 101
QS D S ++FVG + T+E L++ FS+ G + S+K+ KG GF ++ ++
Sbjct: 8 QSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQ 67
Query: 102 ENAEEALHKLNGTVIGKQSFRADYG------NQWSGAYYGGQVYDGYGYAIPPPNDPSMY 155
E A A+ LNG IG ++ R D + G QV + YG P + P +
Sbjct: 68 ETALSAMRNLNGYEIGGRTLRVDNACTEKSRMEMQQLLQGPQVENPYGEPCEPEDAPELI 127
Query: 156 AAAAAAYGAYPVYGSHQQ 173
A+ +Y +Q
Sbjct: 128 TKTVASLPPEQMYELMKQ 145
>gi|452986364|gb|EME86120.1| hypothetical protein MYCFIDRAFT_52503 [Pseudocercospora fijiensis
CIRAD86]
Length = 482
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 11/108 (10%)
Query: 27 YQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVK 86
+QQ+ Y SN A E S++ IFVG L V DE L Q FS +G ++ +
Sbjct: 149 HQQEIRVNWAYQSNTA-----TKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGNVSEAR 203
Query: 87 IPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
+ +G GFV F +R AE+AL ++G +G ++ R ++ NQ
Sbjct: 204 VMWDMKTGRSRGYGFVAFRDRGEAEKALSSMDGEWLGSRAIRCNWANQ 251
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGY-QQQYSSQGG------YASNGAPGQGPQS---- 49
++ M+G + SR +R A + + QQQ +Q G Y + P QGPQS
Sbjct: 231 LSSMDGEWLGSRAIRCNWANQKGQPSFSQQQAMAQMGMTPTTPYGHHSFPTQGPQSYETI 290
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T DL F +G + + +G F++ + ENA A
Sbjct: 291 VSQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVTETRFQSDRGFAFIKMDSHENAANA 350
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ L+G + + + +G
Sbjct: 351 ICHLSGYQVNGRPLKCSWG 369
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Query: 32 SSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK 91
S G + A GQ ++ + + ++VGGLDP VT++ L+Q F G + SVKI K
Sbjct: 57 SMSGLMSPTSAGGQVRRAAPEPNKRALYVGGLDPRVTEDVLKQIFETTGHVQSVKIIPDK 116
Query: 92 GC-------GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV++ + AE A+ LNG + +Q R ++ Q
Sbjct: 117 NFQSKGYNYGFVEYDDPGAAERAMQTLNGRRVHQQEIRVNWAYQ 160
>gi|76163139|gb|AAX30926.2| SJCHGC08802 protein [Schistosoma japonicum]
Length = 171
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D + TT+++GG+ +T++DLR F Q+GE+ SV + + C F+QFA R AE A +
Sbjct: 81 DRTITTLYIGGIPDGMTEKDLRNHFYQFGELRSVNLHAKQHCAFIQFATRSAAERAAERT 140
Query: 112 -NGTVIGKQSFRADYGN 127
+ ++G ++G
Sbjct: 141 YDRLILGGHRLTVNWGK 157
>gi|330846362|ref|XP_003295005.1| hypothetical protein DICPUDRAFT_51830 [Dictyostelium purpureum]
gi|325074406|gb|EGC28470.1| hypothetical protein DICPUDRAFT_51830 [Dictyostelium purpureum]
Length = 244
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 30/152 (19%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ EM G Y +++P+++ + T ++ + Q S+ +S D +NT I+V
Sbjct: 26 LIEMQGFYINNKPIKVNSPTHKRLNS---QLSTIPDLSS-----------TDPTNTAIYV 71
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
LDP + + L+ F YGEI+ +K+ K FV + RE+AE A LN +G
Sbjct: 72 SQLDPYIDEGVLQTIFGAYGEISFIKMLNNKFSAFVNYVTRESAEAAF-GLNNYAVGNSR 130
Query: 121 FRADYGNQWSGAYYGGQVYDGYGYAIPPPNDP 152
+ QW G A PPP P
Sbjct: 131 LKI----QW-----------GKNIAPPPPKSP 147
>gi|297598418|ref|NP_001045556.2| Os01g0974600 [Oryza sativa Japonica Group]
gi|215768629|dbj|BAH00858.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222619969|gb|EEE56101.1| hypothetical protein OsJ_04953 [Oryza sativa Japonica Group]
gi|255674125|dbj|BAF07470.2| Os01g0974600 [Oryza sativa Japonica Group]
Length = 116
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 6/76 (7%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PV---GKGCGFVQFANRENAEEALHKL 111
+F+GGL + + L+ FSQ+G I VK+ PV KG GFV+FA+ + A ALHK+
Sbjct: 39 LFIGGLSYDTNETALKDAFSQHGHIIQVKVICHPVTGKSKGYGFVKFASEDEAAAALHKM 98
Query: 112 NGTVIGKQSFRADYGN 127
G VI ++ R Y N
Sbjct: 99 GGEVIDGRNIRVHYAN 114
>gi|307166394|gb|EFN60531.1| U2-associated protein SR140 [Camponotus floridanus]
Length = 1023
Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD + T +++G L+P +T++ L + F +YG +AS+KI + CGFV
Sbjct: 274 GSFDNGDPNTTNLYLGNLNPKITEQQLMEIFGKYGPLASIKIMWPRSDEEKARQRNCGFV 333
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADYG 126
F +R++ E AL LNG I + + +G
Sbjct: 334 AFMSRKDGERALKNLNGRDIMQYEMKLGWG 363
>gi|299755830|ref|XP_001828914.2| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
gi|298411401|gb|EAU92921.2| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
Length = 433
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 54/91 (59%), Gaps = 7/91 (7%)
Query: 45 QGPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQ 97
QG Q++ D+S + +FVG L P V DE L + FS +G ++ ++ +G GF+
Sbjct: 95 QGQQNKEDTSGHYHVFVGDLSPEVNDEVLGKAFSAFGTLSDARVMWDMNSGKSRGYGFLA 154
Query: 98 FANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
F ++ +AE+A+ +NG +G ++ R ++ NQ
Sbjct: 155 FRDKTDAEQAIATMNGEWLGSRAIRVNWANQ 185
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 9/135 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK--SSGYQQQYSSQGGYAS-----NGAPGQGPQSEGDS 53
+ MNG + SR +R+ A + + S GG A G P Q +
Sbjct: 165 IATMNGEWLGSRAIRVNWANQKTQGGAPGGGARPSAGGGAPAPVNFQGGPLTYEQVLAQT 224
Query: 54 S--NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
+ NTT++VG L P T DL F G ++ +++ +G FV+ E+A +A+ +L
Sbjct: 225 APYNTTVYVGNLVPYTTQADLIPLFQSIGYLSEIRMQADRGFAFVKLDTHEHAAQAIVQL 284
Query: 112 NGTVIGKQSFRADYG 126
G ++ + + +G
Sbjct: 285 QGQMVHGRPIKCSWG 299
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-------GKGCGFVQFANRENAEEALHK 110
++VG L P VT+ L + F+ G + VKI G GFV++ + AE AL
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 77
Query: 111 LNGTVIGKQSFRADYGNQ 128
LNG I R ++ Q
Sbjct: 78 LNGRKIFDTEIRVNWAYQ 95
>gi|297687495|ref|XP_002821248.1| PREDICTED: nucleolysin TIAR isoform 3 [Pongo abelii]
Length = 386
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 31/125 (24%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 205 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 264
Query: 115 VI---------GKQS-----------------FRADYGN--QWSGAYYGGQVYDGY---G 143
I GK+S F+ DY QWS Y Q Y Y G
Sbjct: 265 TIEGHVVKCYWGKESPDMTKNFQQVIQFFIALFKVDYSQWGQWSQVYGNPQQYGQYMANG 324
Query: 144 YAIPP 148
+ +PP
Sbjct: 325 WQVPP 329
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 111
+FVG L P +T ED++ F+ +G+I+ ++ KG GFV F N+ +AE A+ +
Sbjct: 100 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 159
Query: 112 NGTVIGKQSFRADYGNQ 128
G +G + R ++ +
Sbjct: 160 GGQWLGGRQIRTNWATR 176
>gi|383849268|ref|XP_003700267.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
isoform 2 [Megachile rotundata]
Length = 936
Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD + T +++G L+P +T++ L + F +YG +AS+KI + CGFV
Sbjct: 186 GSFDNGDPNTTNLYLGNLNPKITEQQLMEIFGKYGPLASIKIMWPRSDEEKARQRNCGFV 245
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADYG 126
F +R++ E AL LNG I + + +G
Sbjct: 246 AFMSRKDGERALKNLNGRDIMQYEMKLGWG 275
>gi|308153271|ref|NP_001184003.1| U2-associated SR140 protein-like [Danio rerio]
Length = 968
Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 11/96 (11%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVG 90
+ APG GD + T +++G ++P + +E L Q F +YG +ASVKI
Sbjct: 194 DSAPGS--HDVGDPTTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERARE 251
Query: 91 KGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ CGFV F R +AE AL LNG +I + +G
Sbjct: 252 RNCGFVAFMTRRDAERALKHLNGKMIMNFEMKLGWG 287
>gi|90078618|dbj|BAE88989.1| unnamed protein product [Macaca fascicularis]
Length = 177
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 21/115 (18%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 6 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 65
Query: 115 VIGKQSFRADYGN------------------QWSGAYYGGQVYDGY---GYAIPP 148
I + +G QWS Y Q Y Y G+ +PP
Sbjct: 66 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 120
>gi|328865488|gb|EGG13874.1| CCCH-type zinc finger-containing protein [Dictyostelium
fasciculatum]
Length = 389
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 32 SSQGGYASNG---APGQGPQSEGDSSNTTIFVGGLDPN-VTDEDLRQPFSQYGEIASVKI 87
+ GG A NG P+ D S +T+F+ +DP+ VT+ DLR F +G I S+K+
Sbjct: 198 TDNGGGALNGDGTRTKTAPRPPADRSISTLFLANVDPDQVTESDLRSSFLSFGNIRSIKL 257
Query: 88 PVGKGCGFVQFANRENAEEALHKLNGTV 115
K C FV F R+ AE A+ +L G +
Sbjct: 258 LHDKKCAFVVFEKRDAAESAVQQLFGNL 285
>gi|195343246|ref|XP_002038209.1| GM17877 [Drosophila sechellia]
gi|194133059|gb|EDW54627.1| GM17877 [Drosophila sechellia]
Length = 419
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANR 101
QS D S ++FVG + T+E L++ FS+ G + S+K+ KG GF ++ ++
Sbjct: 8 QSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQ 67
Query: 102 ENAEEALHKLNGTVIGKQSFRADYG------NQWSGAYYGGQVYDGYGYAIPPPNDPSMY 155
E A A+ LNG IG ++ R D + G QV + YG P + P +
Sbjct: 68 ETALSAMRNLNGYEIGGRTLRVDNACTEKSRMEMQQLLQGPQVENPYGEPCEPEDAPELI 127
Query: 156 AAAAAAYGAYPVYGSHQQ 173
A+ +Y +Q
Sbjct: 128 TKTVASLPPEQMYELMKQ 145
>gi|67517823|ref|XP_658695.1| hypothetical protein AN1091.2 [Aspergillus nidulans FGSC A4]
gi|40747053|gb|EAA66209.1| hypothetical protein AN1091.2 [Aspergillus nidulans FGSC A4]
Length = 892
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Query: 27 YQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVK 86
+Q + Y SN A E S++ IFVG L V DE L Q FS +G ++ +
Sbjct: 159 HQSEIRVNWAYQSNTA-----NKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEAR 213
Query: 87 IPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
+ +G GFV F R +AE+AL ++G +G ++ R ++ NQ
Sbjct: 214 VMWDMKTGRSRGYGFVAFRERADAEKALTSMDGEWLGSRAIRCNWANQ 261
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 59/127 (46%), Gaps = 18/127 (14%)
Query: 10 SSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTD 69
++ P+ TP SG +S GGY AP + + ++VGGLDP VT+
Sbjct: 54 NTNPIPTAITTPM--SGNMVSPTSAGGYVRRAAP--------EPNKRALYVGGLDPRVTE 103
Query: 70 EDLRQPFSQYGEIASVKI--------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSF 121
+ L+Q F G + SVKI G GFV+F + AE A+ LNG I +
Sbjct: 104 DILKQIFETTGHVISVKIIPDKNQFNSKGANYGFVEFDDPGAAERAMQTLNGRRIHQSEI 163
Query: 122 RADYGNQ 128
R ++ Q
Sbjct: 164 RVNWAYQ 170
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGG------YASNGAPGQGPQS---- 49
+T M+G + SR +R A + + S QQQ + G + + P G QS
Sbjct: 241 LTSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGIQSYDMV 300
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ + TT +VG L P T D+ F +G + ++ +G F++ ENA A
Sbjct: 301 VQQTPAWQTTCYVGNLTPYTTQNDIVPLFQNFGYVIETRMQADRGFAFIKMDTHENAASA 360
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ +LNG + + + +G
Sbjct: 361 ICQLNGYNVNGRPLKCSWG 379
>gi|224133438|ref|XP_002328042.1| predicted protein [Populus trichocarpa]
gi|222837451|gb|EEE75830.1| predicted protein [Populus trichocarpa]
Length = 263
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 63/124 (50%), Gaps = 16/124 (12%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG----CGF--VQFANRENAEEA 107
++TT+++G + T+E + + FS+ GEI + + + K CGF V + +RE+ E+A
Sbjct: 32 TSTTVYIGNMSFYSTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDA 91
Query: 108 LHKLNGTVIGKQSFRADY------GNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAA 161
+ ++GT++ + R D+ G QW GGQV D Y DP + A +
Sbjct: 92 VKFMSGTILDDRPIRVDFDWGFQEGRQWGRGRSGGQVRDEYRTDY----DPDILLALSVR 147
Query: 162 YGAY 165
G Y
Sbjct: 148 RGGY 151
>gi|414588971|tpg|DAA39542.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 648
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANRENAEEALH 109
NT +++ L+ N+ DE LR+ F++YG I S K+ V +G GFV F + E+A AL
Sbjct: 316 NTNLYLKNLEENIDDEKLRELFAEYGNITSCKVMRDSNGVSRGSGFVAFKSAEDANRALT 375
Query: 110 KLNGTVIGKQSF 121
++NG ++G +
Sbjct: 376 EMNGKMVGSKPL 387
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 58/120 (48%), Gaps = 21/120 (17%)
Query: 22 RKSSGYQ-QQYSSQGGYAS----------NGAPGQGPQSEGDSSNT-----TIFVGGLDP 65
RKS GY Y++QG A NG P + S D S+ IF+ LD
Sbjct: 73 RKSLGYAYVNYNNQGDAARALELLNFTPINGKPIRIMYSNRDPSSRKSGTGNIFIKNLDK 132
Query: 66 NVTDEDLRQPFSQYGEIASVKI---PVG--KGCGFVQFANRENAEEALHKLNGTVIGKQS 120
++ ++ L F +G I S KI P G +G GFVQF E+A+ A+ KLNG +I +
Sbjct: 133 SIDNKALYDTFCAFGNILSCKIATDPSGESRGYGFVQFEKDESAQSAIDKLNGMLINDKK 192
Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 50 EGDSSN---TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANR 101
E SSN + ++V L VTD++L++ F +YG I S + + GFV F N
Sbjct: 205 ENVSSNIKFSNVYVKNLSDTVTDDELKEMFGKYGTITSAVVMRDSDGKSRCFGFVNFENA 264
Query: 102 ENAEEALHKLNGTVIGKQSF 121
+ A +A+ +LNG + +
Sbjct: 265 DAAAQAVQELNGKIFNDKEL 284
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEALH 109
T+++VG L +V D L FSQ G + SV++ G +V + N+ +A AL
Sbjct: 35 TSLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALE 94
Query: 110 KLNGTVIGKQSFRADYGNQ 128
LN T I + R Y N+
Sbjct: 95 LLNFTPINGKPIRIMYSNR 113
>gi|414588970|tpg|DAA39541.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 654
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANRENAEEALH 109
NT +++ L+ N+ DE LR+ F++YG I S K+ V +G GFV F + E+A AL
Sbjct: 316 NTNLYLKNLEENIDDEKLRELFAEYGNITSCKVMRDSNGVSRGSGFVAFKSAEDANRALT 375
Query: 110 KLNGTVIGKQSF 121
++NG ++G +
Sbjct: 376 EMNGKMVGSKPL 387
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 58/120 (48%), Gaps = 21/120 (17%)
Query: 22 RKSSGYQ-QQYSSQGGYAS----------NGAPGQGPQSEGDSSNT-----TIFVGGLDP 65
RKS GY Y++QG A NG P + S D S+ IF+ LD
Sbjct: 73 RKSLGYAYVNYNNQGDAARALELLNFTPINGKPIRIMYSNRDPSSRKSGTGNIFIKNLDK 132
Query: 66 NVTDEDLRQPFSQYGEIASVKI---PVG--KGCGFVQFANRENAEEALHKLNGTVIGKQS 120
++ ++ L F +G I S KI P G +G GFVQF E+A+ A+ KLNG +I +
Sbjct: 133 SIDNKALYDTFCAFGNILSCKIATDPSGESRGYGFVQFEKDESAQSAIDKLNGMLINDKK 192
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 50 EGDSSN---TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANR 101
E SSN + ++V L VTD++L++ F +YG I S + + GFV F N
Sbjct: 205 ENVSSNIKFSNVYVKNLSDTVTDDELKEMFGKYGTITSAVVMRDSDGKSRCFGFVNFENA 264
Query: 102 ENAEEALHKLNGTVIGKQSF 121
+ A +A+ +LNG + +
Sbjct: 265 DAAAQAVQELNGKIFNDKEL 284
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEALH 109
T+++VG L +V D L FSQ G + SV++ G +V + N+ +A AL
Sbjct: 35 TSLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALE 94
Query: 110 KLNGTVIGKQSFRADYGNQ 128
LN T I + R Y N+
Sbjct: 95 LLNFTPINGKPIRIMYSNR 113
>gi|388579312|gb|EIM19637.1| hypothetical protein WALSEDRAFT_33897 [Wallemia sebi CBS 633.66]
Length = 423
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 2/128 (1%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG--QGPQSEGDSSNTTI 58
++ MNG + SR +R+ A + +G + + P + + + NTT+
Sbjct: 164 ISTMNGEWLGSRAIRVNWANQKTQTGSHRLNDLMPTMNAFNGPLSYEAVFQQTPAYNTTV 223
Query: 59 FVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGK 118
++G L P T DL F +G I V++ +G FV+ + ENA A+ +L GT+I
Sbjct: 224 YIGNLTPYTTQADLVPIFQAFGYIIEVRMQADRGFAFVKLDSHENASMAIVQLQGTLIQG 283
Query: 119 QSFRADYG 126
+ + +G
Sbjct: 284 RPIKCSWG 291
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Query: 45 QGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQ 97
QG + D++N +FVG L P V DE L + FS + I+ ++ +G GF+
Sbjct: 94 QGNNKQEDTTNHFHVFVGDLSPEVNDEILSKAFSGFKSISDARVMWDMNTGKSRGYGFLS 153
Query: 98 FANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
F + +AE+A+ +NG +G ++ R ++ NQ
Sbjct: 154 FREKTDAEQAISTMNGEWLGSRAIRVNWANQ 184
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-------GKGCGFVQFANRENAEEALHK 110
++VG L P VT+ L + F+ G + SVKI G GFV++ + AE AL
Sbjct: 17 LYVGNLSPRVTEYMLTEIFAVAGHVQSVKIIPDRNFSHGGLNYGFVEYTDMRAAETALQT 76
Query: 111 LNGTVIGKQSFRADYGNQ 128
LNG I R ++ Q
Sbjct: 77 LNGRKIFDTEIRVNWAYQ 94
>gi|226480630|emb|CAX73412.1| TIA1 cytotoxic granule-associated RNA binding protein [Schistosoma
japonicum]
Length = 651
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 42/113 (37%), Positives = 54/113 (47%), Gaps = 12/113 (10%)
Query: 24 SSGYQQQYSSQG----GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQY 79
S Q Q+SS G N SE DS + IFVG L P V DE L FS +
Sbjct: 123 SESDQSQHSSNSKINHGTTDNVTSTTRSLSEDDSFH--IFVGDLAPEVQDETLLAAFSNF 180
Query: 80 GEIASVKI------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
G I KI KG GFV +A R+ AE A+ +NG +IG ++ R ++
Sbjct: 181 GTITECKIIKDMHTQKPKGYGFVAYATRQEAERAIRIMNGQIIGSRAIRTNWA 233
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 49/76 (64%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
++NTTI+VGG+ +T++ L+ F Q+GEI ++I KG FV+F + A +A+ ++
Sbjct: 259 AANTTIYVGGITNELTEKLLQDSFKQFGEIKEIRIFKDKGFSFVRFDSHVAATQAIVTMH 318
Query: 113 GTVIGKQSFRADYGNQ 128
G ++G Q+ + +G +
Sbjct: 319 GKIVGDQACKCSWGKE 334
>gi|383849266|ref|XP_003700266.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
isoform 1 [Megachile rotundata]
Length = 967
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD + T +++G L+P +T++ L + F +YG +AS+KI + CGFV
Sbjct: 215 GSFDNGDPNTTNLYLGNLNPKITEQQLMEIFGKYGPLASIKIMWPRSDEEKARQRNCGFV 274
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADYG 126
F +R++ E AL LNG I + + +G
Sbjct: 275 AFMSRKDGERALKNLNGRDIMQYEMKLGWG 304
>gi|194900156|ref|XP_001979623.1| GG22991 [Drosophila erecta]
gi|190651326|gb|EDV48581.1| GG22991 [Drosophila erecta]
Length = 416
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANR 101
QS D S ++FVG + T+E L++ FS+ G + S+K+ KG GF ++ ++
Sbjct: 8 QSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQ 67
Query: 102 ENAEEALHKLNGTVIGKQSFRADYG------NQWSGAYYGGQVYDGYGYAIPPPNDPSMY 155
E A A+ LNG IG ++ R D + G QV + YG P + P +
Sbjct: 68 ETALSAMRNLNGYEIGGRTLRVDNACTEKSRMEMQQLLQGPQVENPYGEPCEPEDAPELI 127
Query: 156 AAAAAAYGAYPVYGSHQQ 173
A+ +Y +Q
Sbjct: 128 TKTVASLPPEQMYELMKQ 145
>gi|226290334|gb|EEH45818.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Paracoccidioides brasiliensis Pb18]
Length = 508
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 11/112 (9%)
Query: 23 KSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEI 82
K QQ+ Y SN E S++ IFVG L V DE L Q FS +G +
Sbjct: 160 KPHPLQQEIRVNWAYQSNSN-----NKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSV 214
Query: 83 ASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
+ ++ +G GFV F R +AE+AL ++G +G ++ R ++ NQ
Sbjct: 215 SEARVMWDMKTGRSRGYGFVAFRERSDAEKALSSMDGEWLGSRAIRCNWANQ 266
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGG------YASNGAPGQGPQS---- 49
++ M+G + SR +R A + + S QQQ + G + + P G QS
Sbjct: 246 LSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMV 305
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T DL F +G + + +G FV+ ENA A
Sbjct: 306 VAQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVETRFQADRGFAFVKMDTHENAAMA 365
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ +L+G + + + +G
Sbjct: 366 ICQLSGYNVNGRPLKCSWG 384
>gi|28557621|gb|AAO45216.1| RE27227p [Drosophila melanogaster]
Length = 437
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANR 101
QS D S ++FVG + T+E L++ FS+ G + S+K+ KG GF ++ ++
Sbjct: 8 QSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQ 67
Query: 102 ENAEEALHKLNGTVIGKQSFRADYG------NQWSGAYYGGQVYDGYGYAIPPPNDPSMY 155
E A A+ LNG IG ++ R D + G QV + YG P + P +
Sbjct: 68 ETALSAMRNLNGYEIGGRTLRVDNACTEKSRMEMQQLLQGPQVENPYGEPCEPEDAPELI 127
Query: 156 AAAAAAYGAYPVYGSHQQ 173
A+ +Y +Q
Sbjct: 128 TKTVASLPPEQMYELMKQ 145
>gi|38141765|dbj|BAD00701.1| TIA-1 homologue [Bombyx mori]
Length = 388
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 40 NGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 92
N A G Q + D+SN IFVG L P + LR+ F+ +GEI++ +I KG
Sbjct: 79 NWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKG 138
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
FV F + +AE A+ +NG +G +S R ++ +
Sbjct: 139 YAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTR 174
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQ-PFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
+NTT++ GG N+ E+L Q FSQ+G+I +++ KG F++F +E A A+ +
Sbjct: 206 TNTTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVFRDKGYAFIRFTTKEAAAHAIGATH 265
Query: 113 GTVIGKQSFRADYGNQWSGA 132
T I + + +G + GA
Sbjct: 266 NTEISGHTVKCFWGKENGGA 285
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 51 GDSSN-TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEE 106
GD S+ T++VG LDP+VT+ L F Q G++ KI P F++F A
Sbjct: 2 GDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTAAVT 61
Query: 107 ALHKLNGTVIGKQSFRADY----GNQ 128
AL +N V+ + + ++ GNQ
Sbjct: 62 ALAAMNKRVVLDKEMKVNWATSPGNQ 87
>gi|341903554|gb|EGT59489.1| CBN-TIAR-3 protein [Caenorhabditis brenneri]
Length = 417
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 11/123 (8%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGL 63
MNG + R +R A + S + + + + + S A NT+++VG +
Sbjct: 253 MNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKA-----------DNTSVYVGNI 301
Query: 64 DPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRA 123
TD DLR FS YG+IA V++ + FV++ +E A +A+ ++NG + R
Sbjct: 302 SQQTTDADLRDSFSTYGDIAEVRVFKTQRYAFVRYDKKECATKAIMEMNGKEMAGNQVRC 361
Query: 124 DYG 126
+G
Sbjct: 362 SWG 364
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 6/75 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEALHKL 111
+FVG L +V+++ L+ F +YGE++ K+ KG GFV F N++NAE A+ +
Sbjct: 194 VFVGDLSKDVSNDLLKSTFQKYGEVSEAKVIRDAQTQKSKGYGFVSFPNKQNAENAIAGM 253
Query: 112 NGTVIGKQSFRADYG 126
NG IGK++ R ++
Sbjct: 254 NGKWIGKRAVRTNWA 268
>gi|195452858|ref|XP_002073531.1| GK14167 [Drosophila willistoni]
gi|194169616|gb|EDW84517.1| GK14167 [Drosophila willistoni]
Length = 401
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANR 101
QS D S ++FVG + T+E L++ FS+ G + S+K+ KG GF ++ ++
Sbjct: 9 QSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQ 68
Query: 102 ENAEEALHKLNGTVIGKQSFRADYG------NQWSGAYYGGQVYDGYGYAIPPPNDPSMY 155
E A A+ LNG IG ++ R D + G QV + YG P + P +
Sbjct: 69 ETALSAMRNLNGYEIGGRTLRVDNACTEKSRMEMQQLLQGPQVENPYGEPCEPEDAPELI 128
Query: 156 AAAAAAYGAYPVYGSHQQ 173
A+ +Y +Q
Sbjct: 129 TKTVASLPPEQMYELMKQ 146
>gi|17137710|ref|NP_477453.1| cleavage stimulation factor 64 kilodalton subunit [Drosophila
melanogaster]
gi|5713194|gb|AAD47839.1|AF170082_1 cleavage stimulation factor 64 kilodalton subunit [Drosophila
melanogaster]
gi|23171661|gb|AAF55577.2| cleavage stimulation factor 64 kilodalton subunit [Drosophila
melanogaster]
gi|205360993|gb|ACI03573.1| FI01908p [Drosophila melanogaster]
Length = 419
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANR 101
QS D S ++FVG + T+E L++ FS+ G + S+K+ KG GF ++ ++
Sbjct: 8 QSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQ 67
Query: 102 ENAEEALHKLNGTVIGKQSFRADYG------NQWSGAYYGGQVYDGYGYAIPPPNDPSMY 155
E A A+ LNG IG ++ R D + G QV + YG P + P +
Sbjct: 68 ETALSAMRNLNGYEIGGRTLRVDNACTEKSRMEMQQLLQGPQVENPYGEPCEPEDAPELI 127
Query: 156 AAAAAAYGAYPVYGSHQQ 173
A+ +Y +Q
Sbjct: 128 TKTVASLPPEQMYELMKQ 145
>gi|321474916|gb|EFX85880.1| hypothetical protein DAPPUDRAFT_20224 [Daphnia pulex]
Length = 346
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 28/131 (21%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGL 63
MN C R M++ AT +PG P+ + S + IFVG L
Sbjct: 56 MNKRNCMGREMKVNWAT---------------------SPGNAPKQD-TSKHFHIFVGDL 93
Query: 64 DPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKLNGTVIG 117
P + LR F+ +GEI+ ++ KG GFV F + +AE A+ +NG +G
Sbjct: 94 SPEIETHTLRDAFAAFGEISDCRVVRDPQTLKSKGYGFVSFVKKSDAENAIAGMNGQWLG 153
Query: 118 KQSFRADYGNQ 128
++ R ++ +
Sbjct: 154 TRAIRTNWATR 164
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 18/130 (13%)
Query: 4 MNGVYCSSRPMRIGAAT-----PRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTI 58
MNG + +R +R AT P+ + Y G +S S+N T+
Sbjct: 147 MNGQWLGTRAIRTNWATRKPPAPKDAGSKPMSYEEVFGQSS-------------STNCTV 193
Query: 59 FVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGK 118
+ G L T+E L++ F YG+I +++ KG F++FA++E+A +A+ ++ T +
Sbjct: 194 YCGNLAQGSTEEALQKIFGPYGQIQEIRVFKDKGYAFIRFASKESATQAIVSVHNTDLNG 253
Query: 119 QSFRADYGNQ 128
Q+ + +G +
Sbjct: 254 QNVKCSWGKE 263
>gi|195569859|ref|XP_002102926.1| GD19237 [Drosophila simulans]
gi|194198853|gb|EDX12429.1| GD19237 [Drosophila simulans]
Length = 419
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANR 101
QS D S ++FVG + T+E L++ FS+ G + S+K+ KG GF ++ ++
Sbjct: 8 QSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQ 67
Query: 102 ENAEEALHKLNGTVIGKQSFRADYG------NQWSGAYYGGQVYDGYGYAIPPPNDPSMY 155
E A A+ LNG IG ++ R D + G QV + YG P + P +
Sbjct: 68 ETALSAMRNLNGYEIGGRTLRVDNACTEKSRMEMQQLLQGPQVENPYGEPCEPEDAPELI 127
Query: 156 AAAAAAYGAYPVYGSHQQ 173
A+ +Y +Q
Sbjct: 128 TKTVASLPPEQMYELMKQ 145
>gi|195497709|ref|XP_002096214.1| GE25546 [Drosophila yakuba]
gi|194182315|gb|EDW95926.1| GE25546 [Drosophila yakuba]
Length = 414
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANR 101
QS D S ++FVG + T+E L++ FS+ G + S+K+ KG GF ++ ++
Sbjct: 8 QSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQ 67
Query: 102 ENAEEALHKLNGTVIGKQSFRADYG------NQWSGAYYGGQVYDGYGYAIPPPNDPSMY 155
E A A+ LNG IG ++ R D + G QV + YG P + P +
Sbjct: 68 ETALSAMRNLNGYEIGGRTLRVDNACTEKSRMEMQQLLQGPQVENPYGEPCEPEDAPELI 127
Query: 156 AAAAAAYGAYPVYGSHQQ 173
A+ +Y +Q
Sbjct: 128 TKTVASLPPEQMYELMKQ 145
>gi|291404907|ref|XP_002718787.1| PREDICTED: TIA-1 related protein-like [Oryctolagus cuniculus]
Length = 450
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 21/115 (18%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 279 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 338
Query: 115 VI---------GKQS-------FRADYGN--QWSGAYYGGQVYDGY---GYAIPP 148
I GK+S + DY QWS Y Q Y Y G+ +PP
Sbjct: 339 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 393
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 156 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 215
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV F N+ +AE A+ + G +G + R ++ +
Sbjct: 216 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR 250
>gi|389742195|gb|EIM83382.1| polyadenylate-binding protein [Stereum hirsutum FP-91666 SS1]
Length = 422
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 54/91 (59%), Gaps = 7/91 (7%)
Query: 45 QGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQ 97
QG Q++ D+SN +FVG L P V D+ L + F+ +G ++ ++ +G GF+
Sbjct: 95 QGQQNKEDTSNHFHVFVGDLSPEVNDDVLAKAFAAFGTMSDARVMWDMNSGKSRGYGFLA 154
Query: 98 FANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
F ++ +AE+A+ +NG +G ++ R ++ NQ
Sbjct: 155 FRDKTDAEQAIATMNGEWLGSRAIRVNWANQ 185
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 77/196 (39%), Gaps = 47/196 (23%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEG--------- 51
+ MNG + SR +R+ A + +QGG +G P P G
Sbjct: 165 IATMNGEWLGSRAIRVNWANQK----------TQGGLPVSGGPTASPTRTGAGGAPAPIN 214
Query: 52 ---------------DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFV 96
+ NTT++VG L P T DL F G ++ +++ +G FV
Sbjct: 215 FQGGPLSYESVVQQTPAFNTTVYVGNLVPYCTQSDLIPLFQSIGYLSEIRMQADRGFAFV 274
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYA 156
+ E+A A+ +L G ++ + + +G + DG G A P P A
Sbjct: 275 KLDTHEHAAMAIVQLQGQLVHGRPIKCSWGKDRA---------DG-GAAGTAPMSP---A 321
Query: 157 AAAAAYGAYPVYGSHQ 172
AA YG P+YG Q
Sbjct: 322 TGAAPYGNMPMYGMPQ 337
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-------GKGCGFVQFANRENAEEALHK 110
++VG L P VT+ L + F+ G + VKI G GFV++ + AE AL
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 77
Query: 111 LNGTVIGKQSFRADYGNQ 128
LNG I R ++ Q
Sbjct: 78 LNGRKIFDTEIRVNWAYQ 95
>gi|366987527|ref|XP_003673530.1| hypothetical protein NCAS_0A05890 [Naumovozyma castellii CBS 4309]
gi|342299393|emb|CCC67147.1| hypothetical protein NCAS_0A05890 [Naumovozyma castellii CBS 4309]
Length = 415
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 19/131 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ EM G R + + +T + ++G + G S P + T+F+
Sbjct: 220 IKEMQGKEIDGREINVDMSTSKPAAGNNDRAKKFGDVPSE--PSE-----------TLFL 266
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEALHKLNGT 114
G L N + + + FS+YGEI SV+IP KG G+VQ+ N E+A++AL L G
Sbjct: 267 GNLSFNADRDAISELFSKYGEIISVRIPTHPETEQPKGFGYVQYTNVEDAKKALEGLQGE 326
Query: 115 VIGKQSFRADY 125
I + R DY
Sbjct: 327 YIDNRPVRLDY 337
>gi|259648115|dbj|BAI40365.1| TIA-1 homologue [Bombyx mori]
Length = 402
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 40 NGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 92
N A G Q + D+SN IFVG L P + LR+ F+ +GEI++ +I KG
Sbjct: 79 NWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKG 138
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
FV F + +AE A+ +NG +G +S R ++ +
Sbjct: 139 YAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTR 174
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQ-PFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
+NTT++ GG N+ E+L Q FSQ+G+I +++ KG F++F +E A A+ +
Sbjct: 206 TNTTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVFRDKGYAFIRFTTKEAAAHAIGATH 265
Query: 113 GTVIGKQSFRADYGNQWSGA 132
T I + + +G + GA
Sbjct: 266 NTEISGHTVKCFWGKENGGA 285
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 51 GDSSN-TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEE 106
GD S+ T++VG LDP+VT+ L F Q G++ KI P F++F A
Sbjct: 2 GDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTAAVT 61
Query: 107 ALHKLNGTVIGKQSFRADY----GNQ 128
AL +N V+ + + ++ GNQ
Sbjct: 62 ALAAMNKRVVLDKEMKVNWATSPGNQ 87
>gi|312371659|gb|EFR19788.1| hypothetical protein AND_21810 [Anopheles darlingi]
Length = 440
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 95
+PG P+++ S + IFVG L P + E LR+ F+ +GEI++ +I +G F
Sbjct: 83 SPGNQPKTD-TSQHYHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTLKSRGYAF 141
Query: 96 VQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
V F + AE A+ +NG +G +S R ++ +
Sbjct: 142 VSFVKKAEAENAIQMMNGQWLGSRSIRTNWSTR 174
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 67/132 (50%), Gaps = 16/132 (12%)
Query: 4 MNGVYCSSRPMRIGAAT-----PRKSSGYQQQYSSQGGYASNGAPG-QGPQSEGDSSNTT 57
MNG + SR +R +T PR +S G S PG + + +NTT
Sbjct: 157 MNGQWLGSRSIRTNWSTRKPPAPRDNSK---------GIKSGKTPGFEEIYNNTSPTNTT 207
Query: 58 IFVGGLDPN-VTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
++ GG PN +TDE +++ F+Q+G+I ++ KG F++FAN+E+A A+ + + +
Sbjct: 208 VYCGGFPPNTITDELIQKHFAQFGQIHDTRVFKDKGYAFIRFANKESAARAIEGTHNSEV 267
Query: 117 GKQSFRADYGNQ 128
+ +G +
Sbjct: 268 QGHPVKCYWGKE 279
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEALHKLNG 113
T++VG LD +VT+E L FSQ G + S KI F+++A+ +A+ AL +N
Sbjct: 9 TLYVGNLDTSVTEELLCTLFSQMGTVKSCKIIREASNDPYAFIEYASHTSAQTALAAMNK 68
Query: 114 TVIGKQSFRADY----GNQ 128
K+ + ++ GNQ
Sbjct: 69 RFFLKKEIKVNWATSPGNQ 87
>gi|259488599|tpe|CBF88164.1| TPA: nuclear and cytoplasmic polyadenylated RNA-binding protein
pub1 (AFU_orthologue; AFUA_1G12000) [Aspergillus
nidulans FGSC A4]
Length = 477
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 59/126 (46%), Gaps = 17/126 (13%)
Query: 10 SSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTD 69
++ P+ TP SG +S GGY AP + + ++VGGLDP VT+
Sbjct: 54 NTNPIPTAITTPM--SGNMVSPTSAGGYVRRAAP--------EPNKRALYVGGLDPRVTE 103
Query: 70 EDLRQPFSQYGEIASVKI-------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
+ L+Q F G + SVKI G GFV+F + AE A+ LNG I + R
Sbjct: 104 DILKQIFETTGHVISVKIIPDKNFNSKGANYGFVEFDDPGAAERAMQTLNGRRIHQSEIR 163
Query: 123 ADYGNQ 128
++ Q
Sbjct: 164 VNWAYQ 169
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Query: 27 YQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVK 86
+Q + Y SN A E S++ IFVG L V DE L Q FS +G ++ +
Sbjct: 158 HQSEIRVNWAYQSNTA-----NKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEAR 212
Query: 87 IPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
+ +G GFV F R +AE+AL ++G +G ++ R ++ NQ
Sbjct: 213 VMWDMKTGRSRGYGFVAFRERADAEKALTSMDGEWLGSRAIRCNWANQ 260
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGG------YASNGAPGQGPQS---- 49
+T M+G + SR +R A + + S QQQ + G + + P G QS
Sbjct: 240 LTSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGIQSYDMV 299
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ + TT +VG L P T D+ F +G + ++ +G F++ ENA A
Sbjct: 300 VQQTPAWQTTCYVGNLTPYTTQNDIVPLFQNFGYVIETRMQADRGFAFIKMDTHENAASA 359
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ +LNG + + + +G
Sbjct: 360 ICQLNGYNVNGRPLKCSWG 378
>gi|449267139|gb|EMC78105.1| Pre-mRNA-splicing factor RBM22 [Columba livia]
Length = 420
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +++ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTISESDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSFRADYG 126
N ++ + +G
Sbjct: 288 FNKLIVNGRRLNVKWG 303
>gi|242094866|ref|XP_002437923.1| hypothetical protein SORBIDRAFT_10g004840 [Sorghum bicolor]
gi|241916146|gb|EER89290.1| hypothetical protein SORBIDRAFT_10g004840 [Sorghum bicolor]
Length = 491
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 42/67 (62%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D + T+++GGLD +T++DLR F +GEI S+++ + + FV + RE AE+A +L
Sbjct: 224 DETIRTLYIGGLDSRITEQDLRDQFYAHGEIESIRMVLQRAIAFVTYTTREGAEKAAEEL 283
Query: 112 NGTVIGK 118
++ K
Sbjct: 284 ANKLVIK 290
>gi|392869588|gb|EJB11873.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Coccidioides immitis RS]
Length = 466
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Query: 27 YQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVK 86
+Q + Y SN A E S++ IFVG L V DE L Q FS +G ++ +
Sbjct: 160 HQSEIRVNWAYQSNNA-----NKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEAR 214
Query: 87 IPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
+ +G GFV F R +AE+AL ++G +G ++ R ++ NQ
Sbjct: 215 VMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQ 262
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 55/120 (45%), Gaps = 15/120 (12%)
Query: 16 IGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQP 75
I A SG +S GGY AP + + ++VGGLDP VT++ LRQ
Sbjct: 60 IPTAITSPMSGNMMSPTSAGGYVRRAAP--------EPNKRALYVGGLDPRVTEDILRQI 111
Query: 76 FSQYGEIASVKI-------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
F G + SVKI G GFV++ + AE A+ LNG + + R ++ Q
Sbjct: 112 FETTGHVQSVKIIPDKNFQSKGLNYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQ 171
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGG------YASNGAPGQGPQS---- 49
++ M+G + SR +R A + + S QQQ + G + + P G QS
Sbjct: 242 LSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMV 301
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T DL F +G + + +G FV+ ENA A
Sbjct: 302 VQQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVETRFQADRGFAFVKMDTHENAAMA 361
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ +LNG + + + +G
Sbjct: 362 ICQLNGYNVNGRPLKCSWG 380
>gi|432114097|gb|ELK36142.1| Pre-mRNA-splicing factor RBM22 [Myotis davidii]
Length = 384
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DRTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSFRADYG 126
N ++ +G
Sbjct: 288 FNKLIVNGPRLNVQWG 303
>gi|302903184|ref|XP_003048803.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729737|gb|EEU43090.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 787
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIG 117
+++G LD T+E LRQ FS+YGEI V K C FV F N NA +A+ + G
Sbjct: 513 VYIGNLDETWTEERLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAIRGREEY 572
Query: 118 KQSFRADYGNQWSG----AYYGGQVYDGYGYAIPPPN 150
K+ F+ ++G G Q G G + PPPN
Sbjct: 573 KK-FKVNFGKDRCGNPPRQMQQSQSPRGDGVSSPPPN 608
Score = 42.4 bits (98), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L V+DE+LR+ ++G I ++K+ K
Sbjct: 266 GKPSQVPTSVALAVQQSGASRN--VYLGNLPEEVSDEELREDLGKFGAIDTIKVVREKNI 323
Query: 94 GFVQFANRENAEEALHKL 111
FV + + NA +A+ +L
Sbjct: 324 AFVHYLSIANAIKAVSQL 341
>gi|115491713|ref|XP_001210484.1| hypothetical protein ATEG_00398 [Aspergillus terreus NIH2624]
gi|114197344|gb|EAU39044.1| hypothetical protein ATEG_00398 [Aspergillus terreus NIH2624]
Length = 478
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 55/121 (45%), Gaps = 16/121 (13%)
Query: 16 IGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQP 75
I A SG SS GGY AP + + ++VGGLDP VT++ L+Q
Sbjct: 59 IPTAITSPMSGNMMSPSSAGGYVRRAAP--------EPNKRALYVGGLDPRVTEDILKQI 110
Query: 76 FSQYGEIASVKIPVGKGC--------GFVQFANRENAEEALHKLNGTVIGKQSFRADYGN 127
F G + SVKI K GFV+F + AE A+ LNG I + R ++
Sbjct: 111 FETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERAMQTLNGRRIHQSEIRVNWAY 170
Query: 128 Q 128
Q
Sbjct: 171 Q 171
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E S++ IFVG L V DE L Q FS +G ++ ++ +G GFV F R +
Sbjct: 178 EDTSNHFHIFVGDLSNEVNDEILLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSD 237
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
AE+AL ++G +G ++ R ++ NQ
Sbjct: 238 AEKALSSMDGEWLGSRAIRCNWANQ 262
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGG------YASNGAPGQGPQS---- 49
++ M+G + SR +R A + + S QQQ + G + + P G QS
Sbjct: 242 LSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGMQSYDMV 301
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P + DL F +G + ++ +G F++ + ENA A
Sbjct: 302 VQQTPQWQTTCYVGNLTPYTSQNDLVPLFQNFGFVLETRLQADRGFAFIKMDSHENAAMA 361
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ +LNG + + + +G
Sbjct: 362 ICQLNGYNVNGRPLKCSWG 380
>gi|32564506|ref|NP_871980.1| Protein TIAR-1, isoform f [Caenorhabditis elegans]
gi|373219014|emb|CCD65019.1| Protein TIAR-1, isoform f [Caenorhabditis elegans]
Length = 295
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 11/109 (10%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFV 96
PGQ + + +FVG L V ++ LR+ F +G+++ K+ KG GFV
Sbjct: 9 PGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 68
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADY-----GNQWSGAYYGGQVYD 140
+ RE AE A+ ++NG +G+++ R ++ G+Q ++Y + YD
Sbjct: 69 SYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYD 117
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 69/126 (54%), Gaps = 8/126 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT + G Q++ S Y Q+ GD NT+++V
Sbjct: 80 IEQMNGQWLGRRTIRTNWAT--RKPGDQEKPSH---YNEKSYDEIYNQTSGD--NTSVYV 132
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G + ++T++++RQ F+ +G I V+I +G FV+F N++ A +A+ ++N +G Q
Sbjct: 133 GNI-ASLTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQL 191
Query: 121 FRADYG 126
R +G
Sbjct: 192 VRCSWG 197
>gi|406861752|gb|EKD14805.1| RNA recognition domain-containing protein [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 495
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E S++ IFVG L V DE L Q FS +G ++ ++ +G GFV F R++
Sbjct: 173 EDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERQD 232
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
AE+AL ++G +G ++ R ++ NQ
Sbjct: 233 AEKALSSMDGEWLGSRAIRCNWANQ 257
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 13/124 (10%)
Query: 10 SSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTD 69
++ P+ +P +G S GG+ AP + + ++VGGLDP VT+
Sbjct: 51 NTNPIPTAVTSPMGENGGMMSPDSAGGFVRRAAP--------EPNKRALYVGGLDPRVTE 102
Query: 70 EDLRQPFSQYGEIASVKIPVGKGC-----GFVQFANRENAEEALHKLNGTVIGKQSFRAD 124
+ LRQ F G + +VKI K GFV++ + AE A+ LNG + + R +
Sbjct: 103 DVLRQIFETTGHVQNVKIIPDKNSKGFNYGFVEYDDPAAAERAMQTLNGRRVHQAEIRVN 162
Query: 125 YGNQ 128
+ Q
Sbjct: 163 WAYQ 166
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGGYASNGA------PGQGPQS---- 49
++ M+G + SR +R A + + S QQQ S G S P G QS
Sbjct: 237 LSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMSAMGMTSTTPFGHHHFPTHGVQSYDMI 296
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ + TT++VG L P T DL F +G + + +G FV+ ENA A
Sbjct: 297 VQQTPAWQTTVYVGNLTPYTTQNDLIPLFQNFGYVVETRFQADRGFAFVKMDTHENAAMA 356
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ +L+G + + + +G
Sbjct: 357 ICQLSGYNVNGRPLKCSWG 375
>gi|395504854|ref|XP_003756761.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Sarcophilus harrisii]
Length = 420
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +++ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTISETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEMAAEKS 287
Query: 111 LNGTVIGKQSFRADYG 126
N ++ + +G
Sbjct: 288 FNKLIVNGRRLNVKWG 303
>gi|32564504|ref|NP_495123.2| Protein TIAR-1, isoform e [Caenorhabditis elegans]
gi|373219013|emb|CCD65018.1| Protein TIAR-1, isoform e [Caenorhabditis elegans]
Length = 305
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 11/109 (10%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFV 96
PGQ + + +FVG L V ++ LR+ F +G+++ K+ KG GFV
Sbjct: 19 PGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 78
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADY-----GNQWSGAYYGGQVYD 140
+ RE AE A+ ++NG +G+++ R ++ G+Q ++Y + YD
Sbjct: 79 SYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYD 127
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 69/126 (54%), Gaps = 8/126 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT + G Q++ S Y Q+ GD NT+++V
Sbjct: 90 IEQMNGQWLGRRTIRTNWAT--RKPGDQEKPSH---YNEKSYDEIYNQTSGD--NTSVYV 142
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G + ++T++++RQ F+ +G I V+I +G FV+F N++ A +A+ ++N +G Q
Sbjct: 143 GNI-ASLTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQL 201
Query: 121 FRADYG 126
R +G
Sbjct: 202 VRCSWG 207
>gi|380026763|ref|XP_003697113.1| PREDICTED: LOW QUALITY PROTEIN: U2 snRNP-associated SURP
motif-containing protein-like [Apis florea]
Length = 944
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD + T +++G L+P +T++ L + F +YG +AS+KI + CGFV
Sbjct: 193 GSFDNGDPNTTNLYLGNLNPKITEQQLMEIFGKYGPLASIKIMWPRSDEEKARQRNCGFV 252
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADYG 126
F +R++ E AL LNG I + + +G
Sbjct: 253 AFMSRKDGERALKNLNGRDIMQYEMKLGWG 282
>gi|350410111|ref|XP_003488949.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
isoform 2 [Bombus impatiens]
Length = 968
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD + T +++G L+P +T++ L + F +YG +AS+KI + CGFV
Sbjct: 215 GSFDNGDPNTTNLYLGNLNPKITEQQLMEIFGKYGPLASIKIMWPRSDEEKARQRNCGFV 274
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADYG 126
F +R++ E AL LNG I + + +G
Sbjct: 275 AFMSRKDGERALKNLNGRDIMQYEMKLGWG 304
>gi|350410108|ref|XP_003488948.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
isoform 1 [Bombus impatiens]
Length = 937
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD + T +++G L+P +T++ L + F +YG +AS+KI + CGFV
Sbjct: 186 GSFDNGDPNTTNLYLGNLNPKITEQQLMEIFGKYGPLASIKIMWPRSDEEKARQRNCGFV 245
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADYG 126
F +R++ E AL LNG I + + +G
Sbjct: 246 AFMSRKDGERALKNLNGRDIMQYEMKLGWG 275
>gi|340720345|ref|XP_003398601.1| PREDICTED: u2 snRNP-associated SURP motif-containing protein-like
isoform 2 [Bombus terrestris]
Length = 968
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD + T +++G L+P +T++ L + F +YG +AS+KI + CGFV
Sbjct: 215 GSFDNGDPNTTNLYLGNLNPKITEQQLMEIFGKYGPLASIKIMWPRSDEEKARQRNCGFV 274
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADYG 126
F +R++ E AL LNG I + + +G
Sbjct: 275 AFMSRKDGERALKNLNGRDIMQYEMKLGWG 304
>gi|340720343|ref|XP_003398600.1| PREDICTED: u2 snRNP-associated SURP motif-containing protein-like
isoform 1 [Bombus terrestris]
Length = 937
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD + T +++G L+P +T++ L + F +YG +AS+KI + CGFV
Sbjct: 186 GSFDNGDPNTTNLYLGNLNPKITEQQLMEIFGKYGPLASIKIMWPRSDEEKARQRNCGFV 245
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADYG 126
F +R++ E AL LNG I + + +G
Sbjct: 246 AFMSRKDGERALKNLNGRDIMQYEMKLGWG 275
>gi|334311193|ref|XP_003339587.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Monodelphis
domestica]
Length = 422
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +++ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTISEADLRNHFYQFGEIRTITVVQRQHCAFIQFATRQAAEMAAEKS 287
Query: 111 LNGTVIGKQSFRADYG 126
N ++ + +G
Sbjct: 288 FNKLILNGRRLNVKWG 303
>gi|126290582|ref|XP_001369324.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Monodelphis domestica]
Length = 420
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +++ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTISETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEMAAEKS 287
Query: 111 LNGTVIGKQSFRADYG 126
N ++ + +G
Sbjct: 288 FNKLIVNGRRLNVKWG 303
>gi|242021295|ref|XP_002431080.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Pediculus
humanus corporis]
gi|212516329|gb|EEB18342.1| Heterogeneous nuclear ribonucleoprotein A1, putative, partial
[Pediculus humanus corporis]
Length = 302
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR----KSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNT 56
+ MNG + SR +R AT + K+ G S Y A +N
Sbjct: 60 IAAMNGRWLGSRSIRTNWATRKPSIIKADGNTLPLSFDEVYKQTSA-----------TNC 108
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
T++ GG+ +T+E +++ FS YG I +K+ KG FV+F+ +E+A A+ ++ T I
Sbjct: 109 TVYCGGITNGLTEELVQKHFSPYGTIQEIKVFKDKGYAFVRFSTKESAAHAIVAVHNTEI 168
Query: 117 GKQSFRADYGNQ 128
Q+ + +G +
Sbjct: 169 NGQTVKCSWGKE 180
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 111
IFVG L P + + LR F+ +GEI+ ++ KG GFV F + A+ A+ +
Sbjct: 4 IFVGDLSPEIDTQTLRDAFAPFGEISDSRVVRDAQTLKSKGYGFVSFIKKSEAKSAIAAM 63
Query: 112 NGTVIGKQSFRADYGNQ 128
NG +G +S R ++ +
Sbjct: 64 NGRWLGSRSIRTNWATR 80
>gi|328793609|ref|XP_397019.4| PREDICTED: u2 snRNP-associated SURP motif-containing protein-like
[Apis mellifera]
Length = 966
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD + T +++G L+P +T++ L + F +YG +AS+KI + CGFV
Sbjct: 215 GSFDNGDPNTTNLYLGNLNPKITEQQLMEIFGKYGPLASIKIMWPRSDEEKARQRNCGFV 274
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADYG 126
F +R++ E AL LNG I + + +G
Sbjct: 275 AFMSRKDGERALKNLNGRDIMQYEMKLGWG 304
>gi|413952999|gb|AFW85648.1| pre-mRNA-splicing factor SLT11 [Zea mays]
Length = 493
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 42/67 (62%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D + T+++GGLD +T++DLR F +GEI S+++ + + FV + RE AE+A +L
Sbjct: 224 DETIRTLYIGGLDSRITEQDLRDQFYAHGEIESIRMVLQRAIAFVTYTTREGAEKAAEEL 283
Query: 112 NGTVIGK 118
++ K
Sbjct: 284 ANKLVIK 290
>gi|57899926|dbj|BAD87838.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 203
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 6/76 (7%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PV---GKGCGFVQFANRENAEEALHKL 111
+F+GGL + + L+ FSQ+G I VK+ PV KG GFV+FA+ + A ALHK+
Sbjct: 126 LFIGGLSYDTNETALKDAFSQHGHIIQVKVICHPVTGKSKGYGFVKFASEDEAAAALHKM 185
Query: 112 NGTVIGKQSFRADYGN 127
G VI ++ R Y N
Sbjct: 186 GGEVIDGRNIRVHYAN 201
>gi|125774537|ref|XP_001358527.1| GA20525 [Drosophila pseudoobscura pseudoobscura]
gi|54638266|gb|EAL27668.1| GA20525 [Drosophila pseudoobscura pseudoobscura]
Length = 418
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANR 101
QS D S ++FVG + T+E L++ FS+ G + S+K+ KG GF ++ ++
Sbjct: 8 QSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQ 67
Query: 102 ENAEEALHKLNGTVIGKQSFRADYG------NQWSGAYYGGQVYDGYGYAIPPPNDPSMY 155
E A A+ LNG IG ++ R D + G QV + YG P + P +
Sbjct: 68 ETALSAMRNLNGYEIGGRTLRVDNACTEKSRMEMQQLLQGPQVENPYGEPCEPEDAPELI 127
Query: 156 AAAAAAYGAYPVYGSHQQ 173
A+ +Y +Q
Sbjct: 128 TKTVASLPPEQMYELMKQ 145
>gi|168027976|ref|XP_001766505.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682414|gb|EDQ68833.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 474
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL-HK 110
D S T++VGGL VT+EDL+ F YGEI S+++ + C FV + RE AE+A H
Sbjct: 224 DMSIKTLYVGGLVDRVTEEDLKDQFYGYGEIESIRMVPQRACAFVTYTTREGAEKAADHL 283
Query: 111 LNGTVIGKQSFRADYGN 127
N VI + +G
Sbjct: 284 ANKLVINGLRLKLMWGR 300
>gi|7446337|pir||T15542 hypothetical protein C18A3.5 - Caenorhabditis elegans
Length = 448
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 11/109 (10%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFV 96
PGQ + + +FVG L V ++ LR+ F +G+++ K+ KG GFV
Sbjct: 162 PGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 221
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADY-----GNQWSGAYYGGQVYD 140
+ RE AE A+ ++NG +G+++ R ++ G+Q ++Y + YD
Sbjct: 222 SYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYD 270
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 69/126 (54%), Gaps = 8/126 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT + G Q++ S Y Q+ GD NT+++V
Sbjct: 233 IEQMNGQWLGRRTIRTNWAT--RKPGDQEKPSH---YNEKSYDEIYNQTSGD--NTSVYV 285
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G + ++T++++RQ F+ +G I V+I +G FV+F N++ A +A+ ++N +G Q
Sbjct: 286 GNI-ASLTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQL 344
Query: 121 FRADYG 126
R +G
Sbjct: 345 VRCSWG 350
>gi|326511990|dbj|BAJ95976.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 530
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 5/64 (7%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANRENAEEALHKLN 112
+++ LD +TD+ LR+ FS +G+I S KI V KG GFV F+ RE A +AL ++N
Sbjct: 406 LYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQNGVSKGSGFVSFSTREEASQALTEMN 465
Query: 113 GTVI 116
G +I
Sbjct: 466 GKMI 469
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEA 107
S + IF+ LD + ++ L FS +G I S K+ + KG GFVQ+ E+A+ A
Sbjct: 207 SGSANIFIKNLDKTIDNKTLHDTFSAFGAILSCKVAMDDIGQSKGFGFVQYEKEESAQSA 266
Query: 108 LHKLNGTVIGKQ 119
+ LNG +I +
Sbjct: 267 MKSLNGMLINDK 278
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG-----KGCGFVQFANRENAEEALHKLN 112
+FV L + T EDL + FS+YG I S + +G + GFV F + ++A A+ +LN
Sbjct: 303 VFVKNLSESTTKEDLIKVFSEYGTITSAVVMIGMDGKSRCFGFVNFESPDDAARAVEELN 362
Query: 113 GTVIGKQSF 121
G I + +
Sbjct: 363 GKKINDKEW 371
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEALH 109
T+++VG L+ NVTD L + FSQ G++ SV++ G +V ++N +A A+
Sbjct: 122 TSLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNPMDAARAME 181
Query: 110 KLNGTVIGKQSFRADYGNQ 128
LN + + R Y N+
Sbjct: 182 ALNFAPLNNKPIRVMYSNR 200
>gi|417397890|gb|JAA45978.1| Putative apoptosis-promoting rna-binding protein tia-1/tiar rrm
superfamily [Desmodus rotundus]
Length = 253
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 21/115 (18%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 81 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 140
Query: 115 VI---------GKQS-------FRADYGN--QWSGAYYGGQVYDGY---GYAIPP 148
I GK+S + DY QWS Y Q Y Y G+ +PP
Sbjct: 141 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 195
>gi|403215569|emb|CCK70068.1| hypothetical protein KNAG_0D03220 [Kazachstania naganishii CBS
8797]
Length = 399
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 18/131 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ EM G RP+ + +T + + G + + G P D T+F+
Sbjct: 207 LKEMQGKEIDGRPINVDMSTSKPAGGASNDRAKKFGDV--------PSEPSD----TLFL 254
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEALHKLNGT 114
G L + ++L + F ++GEI SV+IP KG G+VQ+ N E+A++AL L G
Sbjct: 255 GNLSFDADRDNLYEIFGKFGEIISVRIPTHPETEQPKGFGYVQYTNTEDAKKALDALQGE 314
Query: 115 VIGKQSFRADY 125
I + R D+
Sbjct: 315 SINDRPVRLDF 325
>gi|390598149|gb|EIN07547.1| hypothetical protein PUNSTDRAFT_69821 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1273
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 69/141 (48%), Gaps = 21/141 (14%)
Query: 23 KSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNT-----TIFVGGLDPNVTDEDLRQPFS 77
++S Y Q S+QG S P+SEG SS T ++++G LD +VT E L F+
Sbjct: 388 RASPYLQAPSNQGRAVS-------PKSEGSSSQTQTPTRSLWIGNLDSSVTSEQLIHVFA 440
Query: 78 QYGEIASVKIPVGKGCGFVQFANRENA----EEALHKLNGTV--IGKQSFRADYGNQWSG 131
YG I S+++ K CGFV F + +A +E L++L G + Q+ R +G S
Sbjct: 441 PYGAIESLRLLPEKECGFVNFVDMADAIRAKDEVLNRLGGNIGMPNGQTVRIGFGKADSA 500
Query: 132 AYYGGQVYDGYGYAIPPPNDP 152
G+ G + P P P
Sbjct: 501 PLAPGK---GNNVSSPTPTTP 518
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
+++G + T + FS YG I S ++ K CGF+ F ++A A LNG I
Sbjct: 546 LWIGSIPSTTTPAAILSVFSPYGPIESARVLTHKNCGFINFERLDDAVRARKALNGRDI 604
>gi|322786770|gb|EFZ13115.1| hypothetical protein SINV_15313 [Solenopsis invicta]
Length = 320
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 9/86 (10%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFANR 101
GD + T +++G L+P +T++ L + F +YG +AS+KI + CGFV F +R
Sbjct: 192 GDPNTTNLYLGNLNPKITEQQLMEIFGKYGPLASIKIMWPRSDEEKARQRNCGFVAFMSR 251
Query: 102 ENAEEALHKLNGTVIGKQSFRADYGN 127
++ E AL LNG I + + +G
Sbjct: 252 KDGERALKNLNGRDIMQYEMKLGWGK 277
>gi|259648117|dbj|BAI40366.1| TIA-1 homologue [Bombyx mori]
Length = 402
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 40 NGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 92
N A G Q + D+SN IFVG L P + LR+ F+ +GEI++ +I KG
Sbjct: 79 NWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKG 138
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
FV F + +AE A+ +NG +G +S R ++ +
Sbjct: 139 YAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTR 174
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQ-PFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
+NTT++ GG N+ E+L Q FSQ+G+I +++ KG F++F +E A A+ +
Sbjct: 206 TNTTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVFRDKGYAFIRFTTKEAAAHAIEATH 265
Query: 113 GTVIGKQSFRADYGNQWSGA 132
T I + + +G + GA
Sbjct: 266 NTEISGHTVKCFWGKENGGA 285
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 51 GDSSN-TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEE 106
GD S+ T++VG LDP+VT+ L F Q G++ KI P F++F A
Sbjct: 2 GDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTAAAT 61
Query: 107 ALHKLNGTVIGKQSFRADY----GNQ 128
AL +N V+ + + ++ GNQ
Sbjct: 62 ALAAMNKRVVLDKEMKVNWATSPGNQ 87
>gi|226509868|ref|NP_001151426.1| LOC100285059 [Zea mays]
gi|195646758|gb|ACG42847.1| pre-mRNA-splicing factor SLT11 [Zea mays]
Length = 490
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 42/67 (62%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D + T+++GGLD +T++DLR F +GEI S+++ + + FV + RE AE+A +L
Sbjct: 224 DETIRTLYIGGLDSRITEQDLRDQFYAHGEIESIRMVLQRAIAFVTYTTREGAEKAAEEL 283
Query: 112 NGTVIGK 118
++ K
Sbjct: 284 ANKLVIK 290
>gi|71297004|gb|AAH30025.1| TIAL1 protein [Homo sapiens]
Length = 252
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 21/115 (18%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 81 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 140
Query: 115 VI---------GKQS-------FRADYGN--QWSGAYYGGQVYDGY---GYAIPP 148
I GK+S + DY QWS Y Q Y Y G+ +PP
Sbjct: 141 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 195
>gi|256086132|ref|XP_002579259.1| nucleolysin tia-1 [Schistosoma mansoni]
gi|353232225|emb|CCD79580.1| putative nucleolysin tia-1 [Schistosoma mansoni]
Length = 547
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 49/76 (64%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
S+NTTI+VGG+ +T++ L+ F Q+GEI ++I KG F++F + A +A+ ++
Sbjct: 135 STNTTIYVGGITNELTEKLLQDSFKQFGEIKEIRIFKDKGFSFIRFDSHVAATQAIVTMH 194
Query: 113 GTVIGKQSFRADYGNQ 128
G ++G Q+ + +G +
Sbjct: 195 GKIVGDQACKCSWGKE 210
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEALHKL 111
IFVG L P V DE L FS +G I KI KG GFV +A R+ AE A+ +
Sbjct: 35 IFVGDLAPEVQDETLLAAFSNFGTITECKIIKDMHTQKPKGYGFVAYATRQEAERAIRIM 94
Query: 112 NGTVIGKQSFRADYG 126
NG +IG ++ R ++
Sbjct: 95 NGQIIGTRAIRTNWA 109
>gi|344306484|ref|XP_003421917.1| PREDICTED: nucleolysin TIAR-like [Loxodonta africana]
Length = 504
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 21/115 (18%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 333 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 392
Query: 115 VI---------GKQS-------FRADYGN--QWSGAYYGGQVYDGY---GYAIPP 148
I GK+S + DY QWS Y Q Y Y G+ +PP
Sbjct: 393 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 447
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 210 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 269
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV F N+ +AE A+ + G +G + R ++ +
Sbjct: 270 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR 304
>gi|195145742|ref|XP_002013849.1| GL24357 [Drosophila persimilis]
gi|194102792|gb|EDW24835.1| GL24357 [Drosophila persimilis]
Length = 418
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANR 101
QS D S ++FVG + T+E L++ FS+ G + S+K+ KG GF ++ ++
Sbjct: 8 QSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQ 67
Query: 102 ENAEEALHKLNGTVIGKQSFRADYG------NQWSGAYYGGQVYDGYGYAIPPPNDPSMY 155
E A A+ LNG IG ++ R D + G QV + YG P + P +
Sbjct: 68 ETALSAMRNLNGYEIGGRTLRVDNACTEKSRMEMQQLLQGPQVENPYGEPCEPEDAPELI 127
Query: 156 AAAAAAYGAYPVYGSHQQ 173
A+ +Y +Q
Sbjct: 128 TKTVASLPPEQMYELMKQ 145
>gi|195037535|ref|XP_001990216.1| GH18352 [Drosophila grimshawi]
gi|193894412|gb|EDV93278.1| GH18352 [Drosophila grimshawi]
Length = 430
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANR 101
QS D S ++FVG + T+E L++ FS+ G + S+K+ KG GF ++ ++
Sbjct: 8 QSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQ 67
Query: 102 ENAEEALHKLNGTVIGKQSFRADYG------NQWSGAYYGGQVYDGYGYAIPPPNDPSMY 155
E A A+ LNG IG ++ R D + G QV + YG P + P +
Sbjct: 68 ETALSAMRNLNGYEIGGRTLRVDNACTEKSRMEMQQLLQGPQVENPYGEPCDPDDAPELI 127
Query: 156 AAAAAAYGAYPVYGSHQQ 173
A+ +Y +Q
Sbjct: 128 TKTVASLPPEQMYELMKQ 145
>gi|367051094|ref|XP_003655926.1| hypothetical protein THITE_2120229 [Thielavia terrestris NRRL 8126]
gi|347003190|gb|AEO69590.1| hypothetical protein THITE_2120229 [Thielavia terrestris NRRL 8126]
Length = 500
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Query: 27 YQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVK 86
+Q + Y SN A E S++ IFVG L V DE L Q FS +G ++ +
Sbjct: 156 HQSEIRVNWAYQSNNA-----NKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEAR 210
Query: 87 IPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
+ +G GFV F R +AE+AL ++G +G ++ R ++ NQ
Sbjct: 211 VMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQ 258
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC-----GFVQFANRENAEEALHKLN 112
++VGGLDP VT++ LRQ F G + SVKI K GFV++ + AE A+ LN
Sbjct: 92 LYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKNARGYNYGFVEYDDPGAAERAMQTLN 151
Query: 113 GTVIGKQSFRADYGNQ 128
G + + R ++ Q
Sbjct: 152 GRRVHQSEIRVNWAYQ 167
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 12/111 (10%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TT +VG L P T D+ F +G + + +G FV+ ENA A+ +LNG
Sbjct: 306 TTCYVGNLTPYTTQNDIVPLFQNFGFVVESRFQADRGFAFVKMDTHENAAMAICQLNGYN 365
Query: 116 IGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYP 166
+ + + +G + A++ Q +D PN P Y+ +A YP
Sbjct: 366 VNGRPLKCSWGKDKTPAHH--QPFD--------PNQP--YSPQSAQTPGYP 404
>gi|302808804|ref|XP_002986096.1| hypothetical protein SELMODRAFT_425040 [Selaginella moellendorffii]
gi|300146244|gb|EFJ12915.1| hypothetical protein SELMODRAFT_425040 [Selaginella moellendorffii]
Length = 398
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D++ T++VGGLD VT EDL+ F YG+I S+++ + C F+ + RE+AE+A
Sbjct: 95 DATVRTLYVGGLDERVTTEDLKDNFYSYGKIESLRLVPQRACAFITYTTREDAEKAAEDL 154
Query: 111 ------LNGTVIGKQSFRADYGNQWSGAYYGGQV 138
L+ Q + G W A G Q+
Sbjct: 155 SFKHQMLDLDDCKWQEIKPKLGAAWPSARTGFQL 188
>gi|223974935|gb|ACN31655.1| unknown [Zea mays]
gi|413952998|gb|AFW85647.1| hypothetical protein ZEAMMB73_699245 [Zea mays]
Length = 441
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 42/67 (62%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D + T+++GGLD +T++DLR F +GEI S+++ + + FV + RE AE+A +L
Sbjct: 224 DETIRTLYIGGLDSRITEQDLRDQFYAHGEIESIRMVLQRAIAFVTYTTREGAEKAAEEL 283
Query: 112 NGTVIGK 118
++ K
Sbjct: 284 ANKLVIK 290
>gi|17531965|ref|NP_495121.1| Protein TIAR-1, isoform a [Caenorhabditis elegans]
gi|373219010|emb|CCD65015.1| Protein TIAR-1, isoform a [Caenorhabditis elegans]
Length = 408
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 11/109 (10%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFV 96
PGQ + + +FVG L V ++ LR+ F +G+++ K+ KG GFV
Sbjct: 122 PGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 181
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADY-----GNQWSGAYYGGQVYD 140
+ RE AE A+ ++NG +G+++ R ++ G+Q ++Y + YD
Sbjct: 182 SYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYD 230
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 69/126 (54%), Gaps = 8/126 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT + G Q++ S Y Q+ GD NT+++V
Sbjct: 193 IEQMNGQWLGRRTIRTNWAT--RKPGDQEKPSH---YNEKSYDEIYNQTSGD--NTSVYV 245
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G + ++T++++RQ F+ +G I V+I +G FV+F N++ A +A+ ++N +G Q
Sbjct: 246 GNI-ASLTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQL 304
Query: 121 FRADYG 126
R +G
Sbjct: 305 VRCSWG 310
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC----GFVQFANRENAEEALHKLN 112
T++VG LD VT++ + F+Q G + K+ + G FV+F++ A +AL +N
Sbjct: 47 TLYVGNLDSTVTEDFIATLFNQIGSVTKTKV-IFDGSNDPYAFVEFSDHGQASQALQTMN 105
Query: 113 GTVIGKQSFRADY 125
++ + + ++
Sbjct: 106 KRLLLDREMKVNW 118
>gi|195108753|ref|XP_001998957.1| GI23336 [Drosophila mojavensis]
gi|193915551|gb|EDW14418.1| GI23336 [Drosophila mojavensis]
Length = 428
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANR 101
QS D S ++FVG + T+E L++ FS+ G + S+K+ KG GF ++ ++
Sbjct: 8 QSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQ 67
Query: 102 ENAEEALHKLNGTVIGKQSFRADYG------NQWSGAYYGGQVYDGYGYAIPPPNDPSMY 155
E A A+ LNG IG ++ R D + G QV + YG P + P +
Sbjct: 68 ETALSAMRNLNGYEIGGRTLRVDNACTEKSRMEMQQLLQGPQVENPYGEPCDPDDAPELI 127
Query: 156 AAAAAAYGAYPVYGSHQQ 173
A+ +Y +Q
Sbjct: 128 TKTVASLPPEQMYELMKQ 145
>gi|147902038|ref|NP_001087561.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
laevis]
gi|51261513|gb|AAH80105.1| MGC84540 protein [Xenopus laevis]
Length = 389
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S + + ++ SN T++
Sbjct: 164 IAQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNAKQLTY----EEVVNQSSPSNCTVYC 218
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I V++ KG FV+F++ E+A A+ +NGT I
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHV 278
Query: 121 FRADYGNQ 128
+ +G +
Sbjct: 279 VKCYWGKE 286
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 111
+FVG L P +T +D++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEITTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQM 167
Query: 112 NGTVIGKQSFRADYGNQ 128
G +G + R ++ +
Sbjct: 168 GGQWLGGRQIRTNWATR 184
>gi|229577428|ref|NP_001153375.1| U2-associated SR140 protein [Nasonia vitripennis]
Length = 935
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD + T +++G L+P +T++ L++ F ++G +AS+KI + CGFV
Sbjct: 187 GSFDNGDPNTTNLYLGNLNPKITEQQLKKIFGKFGPLASIKIMWPRSDEEKARQRNCGFV 246
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADYG 126
F +R++ E AL LNG I + + +G
Sbjct: 247 AFMSRKDGERALKSLNGRDIMQYEMKLGWG 276
>gi|17531963|ref|NP_495120.1| Protein TIAR-1, isoform b [Caenorhabditis elegans]
gi|373219011|emb|CCD65016.1| Protein TIAR-1, isoform b [Caenorhabditis elegans]
Length = 376
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 11/109 (10%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFV 96
PGQ + + +FVG L V ++ LR+ F +G+++ K+ KG GFV
Sbjct: 90 PGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 149
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADY-----GNQWSGAYYGGQVYD 140
+ RE AE A+ ++NG +G+++ R ++ G+Q ++Y + YD
Sbjct: 150 SYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYD 198
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 69/126 (54%), Gaps = 8/126 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT + G Q++ S Y Q+ GD NT+++V
Sbjct: 161 IEQMNGQWLGRRTIRTNWAT--RKPGDQEKPSH---YNEKSYDEIYNQTSGD--NTSVYV 213
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G + ++T++++RQ F+ +G I V+I +G FV+F N++ A +A+ ++N +G Q
Sbjct: 214 GNI-ASLTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQL 272
Query: 121 FRADYG 126
R +G
Sbjct: 273 VRCSWG 278
>gi|118918389|ref|NP_001036895.2| TIA1 cytotoxic granule-associated RNA binding protein [Bombyx mori]
gi|111608113|gb|ABH10800.1| nucleolysin TIAR protein [Bombyx mori]
Length = 402
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 40 NGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 92
N A G Q + D+SN IFVG L P + LR+ F+ +GEI++ +I KG
Sbjct: 79 NWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKG 138
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
FV F + +AE A+ +NG +G +S R ++ +
Sbjct: 139 YAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTR 174
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQ-PFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
+NTT++ GG N+ E+L Q FSQ+G+I +++ KG F++F +E A A+ +
Sbjct: 206 TNTTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVFRDKGYAFIRFTTKEAAAHAIEATH 265
Query: 113 GTVIGKQSFRADYGNQWSGA 132
T I + + +G + GA
Sbjct: 266 NTEISGHTVKCFWGKENGGA 285
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 51 GDSSN-TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEE 106
GD S+ T++VG LDP+VT+ L F Q G++ KI P F++F A
Sbjct: 2 GDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTAAAT 61
Query: 107 ALHKLNGTVIGKQSFRADY----GNQ 128
AL +N V+ + + ++ GNQ
Sbjct: 62 ALAAMNKRVVLDKEMKVNWATSPGNQ 87
>gi|6678349|ref|NP_033409.1| nucleolysin TIAR [Mus musculus]
gi|61557246|ref|NP_001013211.1| nucleolysin TIAR [Rattus norvegicus]
gi|2500589|sp|P70318.1|TIAR_MOUSE RecName: Full=Nucleolysin TIAR; AltName: Full=TIA-1-related protein
gi|1592563|gb|AAC52870.1| RNA binding protein TIAR [Mus musculus]
gi|12848609|dbj|BAB28019.1| unnamed protein product [Mus musculus]
gi|60552455|gb|AAH91409.1| Tia1 cytotoxic granule-associated RNA binding protein-like 1
[Rattus norvegicus]
gi|148685702|gb|EDL17649.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_c [Mus musculus]
gi|149067621|gb|EDM17173.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1
(mapped), isoform CRA_a [Rattus norvegicus]
Length = 392
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 21/115 (18%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 221 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 280
Query: 115 VI---------GKQS-------FRADYGN--QWSGAYYGGQVYDGY---GYAIPP 148
I GK+S + DY QWS Y Q Y Y G+ +PP
Sbjct: 281 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 335
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 98 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 157
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV F N+ +AE A+ + G +G + R ++ +
Sbjct: 158 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR 192
>gi|119174082|ref|XP_001239402.1| hypothetical protein CIMG_09023 [Coccidioides immitis RS]
Length = 485
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Query: 27 YQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVK 86
+Q + Y SN A E S++ IFVG L V DE L Q FS +G ++ +
Sbjct: 160 HQSEIRVNWAYQSNNA-----NKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEAR 214
Query: 87 IPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
+ +G GFV F R +AE+AL ++G +G ++ R ++ NQ
Sbjct: 215 VMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQ 262
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 55/120 (45%), Gaps = 15/120 (12%)
Query: 16 IGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQP 75
I A SG +S GGY AP + + ++VGGLDP VT++ LRQ
Sbjct: 60 IPTAITSPMSGNMMSPTSAGGYVRRAAP--------EPNKRALYVGGLDPRVTEDILRQI 111
Query: 76 FSQYGEIASVKI-------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
F G + SVKI G GFV++ + AE A+ LNG + + R ++ Q
Sbjct: 112 FETTGHVQSVKIIPDKNFQSKGLNYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQ 171
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGG------YASNGAPGQGPQS---- 49
++ M+G + SR +R A + + S QQQ + G + + P G QS
Sbjct: 242 LSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMV 301
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T DL F +G + + +G FV+ ENA A
Sbjct: 302 VQQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVETRFQADRGFAFVKMDTHENAAMA 361
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ +LNG + + + +G
Sbjct: 362 ICQLNGYNVNGRPLKCSWG 380
>gi|17537143|ref|NP_496718.1| Protein TIAR-2 [Caenorhabditis elegans]
gi|6425313|emb|CAB60356.1| Protein TIAR-2 [Caenorhabditis elegans]
Length = 434
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFV 96
PG+ S + +FVG L + LR+ F ++GE++ KI GKG GFV
Sbjct: 119 PGENRSKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFV 178
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
+ RE+AE A+ ++NG +G+++ R ++ +
Sbjct: 179 SYPRREDAERAIDEMNGAWLGRRTIRTNWATR 210
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC----GFVQFANRENAEEALHKLN 112
T+FV LDP +TDE L F+Q G + KI + +G FV+F++ A AL N
Sbjct: 41 TLFVANLDPAITDEFLATLFNQIGAVMKAKI-IFEGLNDPYAFVEFSDHNQATLALQSHN 99
Query: 113 GTVIGKQSFRADY 125
G + ++ +
Sbjct: 100 GRELLEKEMHVTW 112
>gi|66802614|ref|XP_635179.1| RNA recognition motif RNP-1 domain-containing protein
[Dictyostelium discoideum AX4]
gi|60463492|gb|EAL61677.1| RNA recognition motif RNP-1 domain-containing protein
[Dictyostelium discoideum AX4]
Length = 463
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 15/126 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG Y +++P+++ T ++ Q S+ S D +NT I+V
Sbjct: 172 LIDMNGFYINNKPIKVNNPTHKR---LNSQTSTIPDLTS-----------TDPNNTAIYV 217
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
LD + + L+ F YGEI+ +K+ K FV F NRE+AE A LN +G
Sbjct: 218 SQLDHYIDEGVLQTIFGAYGEISYIKMLTNKFSAFVNFVNRESAEAAF-GLNNFPVGNTR 276
Query: 121 FRADYG 126
+ +G
Sbjct: 277 LKVQWG 282
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIP------VGKGCGFVQFANRENAEE 106
S+ ++++G L +VTD+ L F +Y + S ++ + +G GFV+FA+ ++
Sbjct: 111 SDLSLYIGDLATDVTDQQLMNAFQGRYPSVRSARVIMDSATGISRGYGFVKFASDVEKDK 170
Query: 107 ALHKLNGTVIGKQSFRAD 124
AL +NG I + + +
Sbjct: 171 ALIDMNGFYINNKPIKVN 188
>gi|148685701|gb|EDL17648.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_b [Mus musculus]
gi|149067623|gb|EDM17175.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1
(mapped), isoform CRA_c [Rattus norvegicus]
Length = 252
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 21/115 (18%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 81 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 140
Query: 115 VI---------GKQS-------FRADYGN--QWSGAYYGGQVYDGY---GYAIPP 148
I GK+S + DY QWS Y Q Y Y G+ +PP
Sbjct: 141 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 195
>gi|77695912|ref|NP_001029097.1| nucleolysin TIAR isoform 2 [Homo sapiens]
gi|73998714|ref|XP_852319.1| PREDICTED: nucleolysin TIAR isoform 2 [Canis lupus familiaris]
gi|114633030|ref|XP_001154768.1| PREDICTED: nucleolysin TIAR isoform 6 [Pan troglodytes]
gi|311271911|ref|XP_003133244.1| PREDICTED: nucleolysin TIAR isoform 2 [Sus scrofa]
gi|338716472|ref|XP_003363459.1| PREDICTED: nucleolysin TIAR [Equus caballus]
gi|390473251|ref|XP_003734574.1| PREDICTED: nucleolysin TIAR isoform 2 [Callithrix jacchus]
gi|395827973|ref|XP_003787162.1| PREDICTED: nucleolysin TIAR isoform 1 [Otolemur garnettii]
gi|397510639|ref|XP_003825700.1| PREDICTED: nucleolysin TIAR isoform 2 [Pan paniscus]
gi|402881652|ref|XP_003904380.1| PREDICTED: nucleolysin TIAR isoform 2 [Papio anubis]
gi|426253186|ref|XP_004020281.1| PREDICTED: nucleolysin TIAR isoform 2 [Ovis aries]
gi|426366374|ref|XP_004050233.1| PREDICTED: nucleolysin TIAR isoform 2 [Gorilla gorilla gorilla]
gi|158255404|dbj|BAF83673.1| unnamed protein product [Homo sapiens]
gi|380783709|gb|AFE63730.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|383408327|gb|AFH27377.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|384942768|gb|AFI34989.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|410218476|gb|JAA06457.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410257384|gb|JAA16659.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410296998|gb|JAA27099.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
Length = 392
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 21/115 (18%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 221 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 280
Query: 115 VI---------GKQS-------FRADYGN--QWSGAYYGGQVYDGY---GYAIPP 148
I GK+S + DY QWS Y Q Y Y G+ +PP
Sbjct: 281 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 335
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 98 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 157
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV F N+ +AE A+ + G +G + R ++ +
Sbjct: 158 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR 192
>gi|310798412|gb|EFQ33305.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 482
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 49 SEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANR 101
S+ D+SN IFVG L V DE L Q FS +G ++ ++ +G GFV F +R
Sbjct: 169 SKEDTSNHFHIFVGDLSNEVNDEILTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDR 228
Query: 102 ENAEEALHKLNGTVIGKQSFRADYGNQ 128
+AE+AL ++G +G ++ R ++ NQ
Sbjct: 229 PDAEKALSSMDGEWLGSRAIRCNWANQ 255
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 13/101 (12%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG 92
S GG+ AP + + ++VGGLD VT++ LRQ F G + +VKI K
Sbjct: 72 SAGGFGRRAAP--------EPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKN 123
Query: 93 C-----GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV++ + AE A+ LNG + + R ++ Q
Sbjct: 124 AKGYNYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQ 164
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 58/139 (41%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQG-------GYASNGAPGQGPQS---- 49
++ M+G + SR +R A + QQ + Q + + P G S
Sbjct: 235 LSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQAMGLTPTTPFGHHQFPAHGVASYEVV 294
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ S TT +VG L P T D+ F +G + + +G F++ + E+A A
Sbjct: 295 LAQTPSWQTTCYVGNLTPYTTPNDVVPLFQNFGYVVESRFQADRGFAFIKMDSHESAAMA 354
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ ++NG + + + +G
Sbjct: 355 ICQMNGYNVNGRPLKCSWG 373
>gi|221486024|gb|EEE24294.1| RNA recognition motif-containing protein, putative [Toxoplasma
gondii GT1]
Length = 865
Score = 58.9 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 34/93 (36%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGC 93
PG P S+T +++G L P +T+E L Q F +YG I SVKI + C
Sbjct: 276 PGAPPVDLEKESSTNLYLGNLSPEITEEFLCQQFGKYGNITSVKIMYPRTEEEKKRNRNC 335
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
GFV F +R AE A H L+G R +G
Sbjct: 336 GFVSFESRPQAEAAKHNLDGVSFYGMVIRIGWG 368
>gi|237834785|ref|XP_002366690.1| RRM domain-containing protein [Toxoplasma gondii ME49]
gi|211964354|gb|EEA99549.1| RRM domain-containing protein [Toxoplasma gondii ME49]
gi|221503520|gb|EEE29211.1| RNA recognition motif-containing protein, putative [Toxoplasma
gondii VEG]
Length = 859
Score = 58.9 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 34/93 (36%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGC 93
PG P S+T +++G L P +T+E L Q F +YG I SVKI + C
Sbjct: 276 PGAPPVDLEKESSTNLYLGNLSPEITEEFLCQQFGKYGNITSVKIMYPRTEEEKKRNRNC 335
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
GFV F +R AE A H L+G R +G
Sbjct: 336 GFVSFESRPQAEAAKHNLDGVSFYGMVIRIGWG 368
>gi|45872602|gb|AAH68194.1| Tial1 protein [Mus musculus]
Length = 269
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 21/115 (18%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 98 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 157
Query: 115 VI---------GKQS-------FRADYGN--QWSGAYYGGQVYDGY---GYAIPP 148
I GK+S + DY QWS Y Q Y Y G+ +PP
Sbjct: 158 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 212
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 67 VTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
+T ED++ F+ +G+I+ ++ KG GFV F N+ +AE A+ + G +G +
Sbjct: 2 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 61
Query: 121 FRADYGNQ 128
R ++ +
Sbjct: 62 IRTNWATR 69
>gi|384487960|gb|EIE80140.1| hypothetical protein RO3G_04845 [Rhizopus delemar RA 99-880]
Length = 292
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 55/112 (49%), Gaps = 26/112 (23%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFAN 100
+GDS +T ++VG + P VT+ L F ++G IASVKI G+ GFV F N
Sbjct: 194 DGDSHSTNLYVGNIHPTVTEMGLCHEFGKFGPIASVKIMWPRTLEEKEKGRNNGFVCFMN 253
Query: 101 RENAEEALHKLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDP 152
RE+A EA+ LNG + G ++ G+G A+ P +P
Sbjct: 254 REDAAEAIKGLNGIELE-----------------GFKLRVGWGKAVALPAEP 288
>gi|303314025|ref|XP_003067021.1| oligouridylate binding protein ,putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240106689|gb|EER24876.1| oligouridylate binding protein ,putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320039295|gb|EFW21229.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Coccidioides posadasii str. Silveira]
Length = 483
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Query: 27 YQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVK 86
+Q + Y SN A E S++ IFVG L V DE L Q FS +G ++ +
Sbjct: 158 HQSEIRVNWAYQSNNA-----NKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEAR 212
Query: 87 IPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
+ +G GFV F R +AE+AL ++G +G ++ R ++ NQ
Sbjct: 213 VMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQ 260
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 55/118 (46%), Gaps = 13/118 (11%)
Query: 16 IGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQP 75
I A SG +S GGY AP + + ++VGGLDP VT++ LRQ
Sbjct: 60 IPTAITSPMSGNMMSPTSAGGYVRRAAP--------EPNKRALYVGGLDPRVTEDILRQI 111
Query: 76 FSQYGEIASVKIPVGKGC-----GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
F G + SVKI K GFV++ + AE A+ LNG + + R ++ Q
Sbjct: 112 FETTGHVQSVKIIPDKNSKGLNYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQ 169
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGG------YASNGAPGQGPQS---- 49
++ M+G + SR +R A + + S QQQ + G + + P G QS
Sbjct: 240 LSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMV 299
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T DL F +G + + +G FV+ ENA A
Sbjct: 300 VQQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVETRFQADRGFAFVKMDTHENAAMA 359
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ +LNG + + + +G
Sbjct: 360 ICQLNGYNVNGRPLKCSWG 378
>gi|432115353|gb|ELK36770.1| Nucleolysin TIAR [Myotis davidii]
Length = 284
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 21/115 (18%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 154 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 213
Query: 115 VI---------GKQS-------FRADYGN--QWSGAYYGGQVYDGY---GYAIPP 148
I GK+S + DY QWS Y Q Y Y G+ +PP
Sbjct: 214 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 268
>gi|380478106|emb|CCF43782.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 482
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 49 SEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANR 101
S+ D+SN IFVG L V DE L Q FS +G ++ ++ +G GFV F +R
Sbjct: 169 SKEDTSNHFHIFVGDLSNEVNDEILTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDR 228
Query: 102 ENAEEALHKLNGTVIGKQSFRADYGNQ 128
+AE+AL ++G +G ++ R ++ NQ
Sbjct: 229 PDAEKALSSMDGEWLGSRAIRCNWANQ 255
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 13/101 (12%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG 92
S GG+ AP + + ++VGGLD VT++ LRQ F G + +VKI K
Sbjct: 72 SAGGFGRRAAP--------EPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKN 123
Query: 93 C-----GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV++ + AE A+ LNG + + R ++ Q
Sbjct: 124 AKGYNYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQ 164
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 58/139 (41%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQG-------GYASNGAPGQGPQS---- 49
++ M+G + SR +R A + QQ + Q + + P G S
Sbjct: 235 LSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQAMGLTPTTPFGHHQFPAHGVASYEVV 294
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ S TT +VG L P T D+ F +G + + +G F++ + E+A A
Sbjct: 295 LAQTPSWQTTCYVGNLTPYTTPNDVVPLFQNFGYVVESRFQADRGFAFIKMDSHESAAMA 354
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ ++NG + + + +G
Sbjct: 355 ICQMNGYNVNGRPLKCSWG 373
>gi|441599875|ref|XP_004087575.1| PREDICTED: nucleolysin TIAR isoform 2 [Nomascus leucogenys]
gi|441599878|ref|XP_003255076.2| PREDICTED: nucleolysin TIAR isoform 1 [Nomascus leucogenys]
gi|119569773|gb|EAW49388.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_d [Homo sapiens]
Length = 353
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 21/115 (18%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 182 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 241
Query: 115 VI---------GKQS-------FRADYGN--QWSGAYYGGQVYDGY---GYAIPP 148
I GK+S + DY QWS Y Q Y Y G+ +PP
Sbjct: 242 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 296
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 59 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 118
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV F N+ +AE A+ + G +G + R ++ +
Sbjct: 119 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR 153
>gi|451847206|gb|EMD60514.1| hypothetical protein COCSADRAFT_29739 [Cochliobolus sativus ND90Pr]
Length = 506
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E S++ IFVG L V DE L Q FS +G ++ ++ +G GFV F +R +
Sbjct: 175 EDTSNHFHIFVGDLSNEVNDEVLLQAFSTFGPVSEARVMWDMKTGRSRGYGFVAFRDRAD 234
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
AE AL+ ++G +G ++ R ++ NQ
Sbjct: 235 AERALNSMDGEWLGSRAIRCNWANQ 259
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 13/103 (12%)
Query: 39 SNGAPGQGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC---- 93
++G PG P+ N ++VGGLDP VT++ LRQ F G + SVKI K
Sbjct: 66 TSGQPGYVPRRAAPEPNKRALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTASSPS 125
Query: 94 --------GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV++ + AE + LNG I R ++ Q
Sbjct: 126 FNSKGFNYGFVEYDDPGAAERGMATLNGRRIHNNEIRVNWAYQ 168
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 58/139 (41%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR--KSSGYQQQYSSQG-----GYASNGAPGQGPQS---- 49
+ M+G + SR +R A + S QQ +S G + + P G QS
Sbjct: 239 LNSMDGEWLGSRAIRCNWANQKGQPSISQQQAMASMGMTPTTPFGHHHFPTHGVQSYDMV 298
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P + DL F +G + + +G F++ ENA A
Sbjct: 299 VAQTPQWQTTCYVGNLTPYTSQADLVPLFQNFGYVTETRFQSDRGFAFIKMDTHENAAMA 358
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ +LNG + + + +G
Sbjct: 359 ICQLNGYNVNGRPLKCSWG 377
>gi|226528044|dbj|BAH56564.1| TIA-1-related RNA binding protein [Spodoptera litura]
Length = 388
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 40 NGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 92
N A G Q + D+SN IFVG L P + LR F+ +GEI++ +I KG
Sbjct: 79 NWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILRDAFAPFGEISNCRIVRDPQTLKSKG 138
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
FV F + +AE A+ +NG +G +S R ++ +
Sbjct: 139 YAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTR 174
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 64/131 (48%), Gaps = 13/131 (9%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQ-----SEGDSSNTTI 58
MNG + SR +R +T + S ++G +S A + P ++ +NTT+
Sbjct: 157 MNGQWLGSRSIRTNWSTRKPPSK-----PNEGAPSSKRA--KQPTFDEVYNQSSPTNTTV 209
Query: 59 FVGGLDPNVTDEDLRQ-PFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIG 117
+ GG NV EDL Q FSQ+G+I V++ KG F++F +E A A+ + T I
Sbjct: 210 YCGGFTSNVITEDLMQNTFSQFGQIQDVRVFRDKGYAFIRFTTKEAAAHAIEATHNTEIS 269
Query: 118 KQSFRADYGNQ 128
+ +G +
Sbjct: 270 GHIVKCFWGKE 280
Score = 35.8 bits (81), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 51 GDSSN-TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEE 106
GD S+ T++VG LD +VT+ + F Q GE+ KI P F++F + A
Sbjct: 2 GDESHPKTLYVGNLDASVTEVFICTLFGQIGEVKGCKIIREPGNDPYAFLEFTSHTAAAT 61
Query: 107 ALHKLNGTVIGKQSFRADY----GNQ 128
AL +N V+ + + ++ GNQ
Sbjct: 62 ALAAMNKRVVLDKEMKVNWATSPGNQ 87
>gi|429863469|gb|ELA37920.1| nuclear and cytoplasmic polyadenylated rna-binding protein pub1
[Colletotrichum gloeosporioides Nara gc5]
Length = 479
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 49 SEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANR 101
S+ D+SN IFVG L V DE L Q FS +G ++ ++ +G GFV F +R
Sbjct: 168 SKEDTSNHFHIFVGDLSNEVNDEVLTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDR 227
Query: 102 ENAEEALHKLNGTVIGKQSFRADYGNQ 128
+AE+AL ++G +G ++ R ++ NQ
Sbjct: 228 PDAEKALSSMDGEWLGSRAIRCNWANQ 254
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 13/124 (10%)
Query: 10 SSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTD 69
++ P+ +P SS GG+ AP + + ++VGGLD VT+
Sbjct: 48 NTNPIPTAVTSPLSGVDKIMSPSSAGGFGRRAAP--------EPNKRALYVGGLDQRVTE 99
Query: 70 EDLRQPFSQYGEIASVKIPVGKGC-----GFVQFANRENAEEALHKLNGTVIGKQSFRAD 124
+ LRQ F G + +VKI K GFV++ + AE A+ LNG + + R +
Sbjct: 100 DVLRQIFETTGHVQNVKIIPDKNAKGYNYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVN 159
Query: 125 YGNQ 128
+ Q
Sbjct: 160 WAYQ 163
>gi|45360865|ref|NP_989108.1| pre-mRNA-splicing factor RBM22 [Xenopus (Silurana) tropicalis]
gi|82237531|sp|Q6P616.1|RBM22_XENTR RecName: Full=Pre-mRNA-splicing factor RBM22; AltName:
Full=RNA-binding motif protein 22
gi|38566013|gb|AAH62518.1| RNA binding motif protein 22 [Xenopus (Silurana) tropicalis]
gi|89267971|emb|CAJ81393.1| RNA binding motif protein 5 [Xenopus (Silurana) tropicalis]
Length = 417
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D S TT++VGGL +++ +LR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKSITTLYVGGLGDTISESELRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEMAAEKS 287
Query: 111 LNGTVIGKQSFRADYG 126
N ++ + +G
Sbjct: 288 FNKLIVNGRRLNVKWG 303
>gi|395742091|ref|XP_003777693.1| PREDICTED: nucleolysin TIAR [Pongo abelii]
Length = 386
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 21/115 (18%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 215 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 274
Query: 115 VI---------GKQS-------FRADYGN--QWSGAYYGGQVYDGY---GYAIPP 148
I GK+S + DY QWS Y Q Y Y G+ +PP
Sbjct: 275 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 329
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEE 106
S + +FVG L P +T ED++ F+ +G+I+ ++ KG GFV F N+ +AE
Sbjct: 105 SDHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAEN 164
Query: 107 ALHKLNGTVIGKQSFRADYGNQ 128
A+ + G +G + R ++ +
Sbjct: 165 AIVHMGGQWLGGRQIRTNWATR 186
>gi|116791485|gb|ABK25999.1| unknown [Picea sitchensis]
Length = 235
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 12/107 (11%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG----CGF--VQFANRENAEEA 107
++ T++VG L T+E + + FS+ GE+ + + + K CGF V F +RE+ E+A
Sbjct: 32 TSITVYVGNLSFYTTEEQVYELFSRAGEVKKLIMGLDKNTKTPCGFCFVLFYSREDTEDA 91
Query: 108 LHKLNGTVIGKQSFRADY------GNQWSGAYYGGQVYDGYGYAIPP 148
+ ++GT++ +S R D+ G QW GGQV D Y P
Sbjct: 92 VKYISGTILDDRSIRVDFDWGFQEGRQWGRGRSGGQVRDEYRTDYDP 138
>gi|426253188|ref|XP_004020282.1| PREDICTED: nucleolysin TIAR isoform 3 [Ovis aries]
Length = 385
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 21/115 (18%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 214 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 273
Query: 115 VI---------GKQS-------FRADYGN--QWSGAYYGGQVYDGY---GYAIPP 148
I GK+S + DY QWS Y Q Y Y G+ +PP
Sbjct: 274 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 328
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 111
+FVG L P +T ED++ F+ +G+I+ ++ KG GFV F N+ +AE A+ +
Sbjct: 109 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 168
Query: 112 NGTVIGKQSFRADYGNQ 128
G +G + R ++ +
Sbjct: 169 GGQWLGGRQIRTNWATR 185
>gi|417410268|gb|JAA51610.1| Putative apoptosis-promoting rna-binding protein tia-1/tiar rrm
superfamily, partial [Desmodus rotundus]
Length = 382
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 21/115 (18%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 210 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 269
Query: 115 VI---------GKQS-------FRADYGN--QWSGAYYGGQVYDGY---GYAIPP 148
I GK+S + DY QWS Y Q Y Y G+ +PP
Sbjct: 270 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 324
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 87 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 146
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV F N+ +AE A+ + G +G + R ++ +
Sbjct: 147 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR 181
>gi|355562824|gb|EHH19418.1| hypothetical protein EGK_20118, partial [Macaca mulatta]
gi|355766617|gb|EHH62534.1| hypothetical protein EGM_20905, partial [Macaca fascicularis]
gi|440900070|gb|ELR51281.1| Nucleolysin TIAR, partial [Bos grunniens mutus]
Length = 381
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 21/115 (18%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 210 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 269
Query: 115 VI---------GKQS-------FRADYGN--QWSGAYYGGQVYDGY---GYAIPP 148
I GK+S + DY QWS Y Q Y Y G+ +PP
Sbjct: 270 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 324
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 87 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 146
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV F N+ +AE A+ + G +G + R ++ +
Sbjct: 147 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR 181
>gi|297687493|ref|XP_002821247.1| PREDICTED: nucleolysin TIAR isoform 2 [Pongo abelii]
gi|410976207|ref|XP_003994514.1| PREDICTED: nucleolysin TIAR isoform 2 [Felis catus]
Length = 393
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 21/115 (18%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 222 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 281
Query: 115 VI---------GKQS-------FRADYGN--QWSGAYYGGQVYDGY---GYAIPP 148
I GK+S + DY QWS Y Q Y Y G+ +PP
Sbjct: 282 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 336
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 111
+FVG L P +T ED++ F+ +G+I+ ++ KG GFV F N+ +AE A+ +
Sbjct: 117 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 176
Query: 112 NGTVIGKQSFRADYGNQ 128
G +G + R ++ +
Sbjct: 177 GGQWLGGRQIRTNWATR 193
>gi|451997861|gb|EMD90326.1| hypothetical protein COCHEDRAFT_1106708 [Cochliobolus
heterostrophus C5]
Length = 455
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E S++ IFVG L V DE L Q FS +G ++ ++ +G GFV F +R +
Sbjct: 143 EDTSNHFHIFVGDLSNEVNDEVLLQAFSTFGPVSEARVMWDMKTGRSRGYGFVAFRDRAD 202
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
AE AL+ ++G +G ++ R ++ NQ
Sbjct: 203 AERALNSMDGEWLGSRAIRCNWANQ 227
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 13/103 (12%)
Query: 39 SNGAPGQGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC---- 93
++G PG P+ N ++VGGLDP VT++ LRQ F G + SVKI K
Sbjct: 34 TSGQPGYVPRRAAPEPNKRALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTASSPS 93
Query: 94 --------GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV++ + AE + LNG I R ++ Q
Sbjct: 94 FNSKGFNYGFVEYDDPGAAERGMATLNGRRIHNNEIRVNWAYQ 136
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 58/139 (41%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR--KSSGYQQQYSSQG-----GYASNGAPGQGPQS---- 49
+ M+G + SR +R A + S QQ +S G + + P G QS
Sbjct: 207 LNSMDGEWLGSRAIRCNWANQKGQPSISQQQAMASMGMTPTTPFGHHHFPTHGVQSYDMV 266
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P + DL F +G + + +G F++ ENA A
Sbjct: 267 VAQTPQWQTTCYVGNLTPYTSQADLVPLFQNFGYVTETRFQSDRGFAFIKMDTHENAAMA 326
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ +LNG + + + +G
Sbjct: 327 ICQLNGYNVNGRPLKCSWG 345
>gi|344255843|gb|EGW11947.1| Nucleolysin TIAR [Cricetulus griseus]
Length = 353
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 21/115 (18%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 182 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 241
Query: 115 VI---------GKQS-------FRADYGN--QWSGAYYGGQVYDGY---GYAIPP 148
I GK+S + DY QWS Y Q Y Y G+ +PP
Sbjct: 242 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 296
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 59 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 118
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV F N+ +AE A+ + G +G + R ++ +
Sbjct: 119 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR 153
>gi|324509922|gb|ADY44154.1| Pre-mRNA-splicing factor RBM22 [Ascaris suum]
Length = 412
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 48 QSEGDSSNTTIFVGGLDP--NVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAE 105
Q D++ TT++VG L P +T+ DLR F Q+GEI S+ + V +GC F+ F R+ AE
Sbjct: 226 QPPEDTTITTLYVGDLGPAGTITEADLRDYFYQFGEIRSLNVLVSRGCAFIAFTTRQAAE 285
Query: 106 EALHK-LNGTVIGKQSFRADYG 126
A + N ++ + + +G
Sbjct: 286 RAADRSFNKLILQGRRLKIRWG 307
>gi|170084123|ref|XP_001873285.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650837|gb|EDR15077.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 422
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 54/91 (59%), Gaps = 7/91 (7%)
Query: 45 QGPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQ 97
QG Q++ D++ + +FVG L P V DE L + FS +G ++ ++ +G GF+
Sbjct: 90 QGQQNKEDTTGHYHVFVGDLSPEVNDEVLAKAFSAFGTMSDARVMWDMNSGKSRGYGFLA 149
Query: 98 FANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
F ++ +AE+A+ +NG +G ++ R ++ NQ
Sbjct: 150 FRDKTDAEQAIATMNGEWLGSRAIRVNWANQ 180
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 15/142 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ---GGYASNG-APGQ-----GPQS-- 49
+ MNG + SR +R+ A + +S GG + G AP GP S
Sbjct: 160 IATMNGEWLGSRAIRVNWANQKTQGAPPTTTASSPRPGGAVTTGSAPAPINFQGGPLSYE 219
Query: 50 ----EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAE 105
+ + N+T++VG L P T DL F G ++ +++ +G FV+ E+A
Sbjct: 220 SVVQQTPAYNSTVYVGNLVPYCTQADLIPLFQSIGYLSEIRMQADRGFAFVKLDTHEHAA 279
Query: 106 EALHKLNGTVIGKQSFRADYGN 127
A+ +L G ++ + + +G
Sbjct: 280 MAIVQLQGQMVHGRPIKCSWGK 301
Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-------GKGCGFVQFANRENAEEALHK 110
++VG L P VT+ L + F+ G + VKI G GFV++ + AE AL
Sbjct: 13 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 72
Query: 111 LNGTVIGKQSFRADYGNQ 128
LNG I R ++ Q
Sbjct: 73 LNGRKIFDTEIRVNWAYQ 90
>gi|326503608|dbj|BAJ86310.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 5/64 (7%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANRENAEEALHKLN 112
+++ LD +TD+ LR+ FS +G+I S KI V KG GFV F+ RE A +AL ++N
Sbjct: 406 LYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQNGVSKGSGFVSFSTREEASQALTEMN 465
Query: 113 GTVI 116
G +I
Sbjct: 466 GKMI 469
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEA 107
S + IF+ LD + ++ L FS +G I S K+ + KG GFVQ+ E+A+ A
Sbjct: 207 SGSANIFIKNLDKTIDNKTLHDTFSAFGAILSCKVAMDDIGQSKGFGFVQYEKEESAQSA 266
Query: 108 LHKLNGTVI 116
+ LNG +I
Sbjct: 267 MKSLNGMLI 275
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG-----KGCGFVQFANRENAEEALHKLN 112
+FV L + T EDL + FS+YG I S + +G + GFV F + ++A A+ +LN
Sbjct: 303 VFVKNLSESTTKEDLIKVFSEYGTITSAVVMIGMDGKSRCFGFVNFESPDDAARAVEELN 362
Query: 113 GTVIGKQSF 121
G I + +
Sbjct: 363 GKKINDKEW 371
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEAL 108
T+++VG L+ NVTD L + FSQ G++ SV++ G +V ++N +A A+
Sbjct: 121 TTSLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNPMDAARAM 180
Query: 109 HKLNGTVIGKQSFRADYGNQ 128
LN + + R Y N+
Sbjct: 181 EALNFAPLNNKPIRVMYSNR 200
>gi|291243067|ref|XP_002741428.1| PREDICTED: RNA binding motif protein 22-like [Saccoglossus
kowalevskii]
Length = 429
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL ++++DLR F Q+GEI S+ + + C FVQF R+++E A +
Sbjct: 228 DRTITTLYVGGLGDKISEKDLRDHFYQFGEIRSINVVARQQCAFVQFTTRQSSELAAERS 287
Query: 111 LNGTVIGKQSFRADYG 126
N ++ + +G
Sbjct: 288 FNKLIMNGRRLNIKWG 303
>gi|158255914|dbj|BAF83928.1| unnamed protein product [Homo sapiens]
Length = 375
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 21/115 (18%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 204 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 263
Query: 115 VI---------GKQS-------FRADYGN--QWSGAYYGGQVYDGY---GYAIPP 148
I GK+S + DY QWS Y Q Y Y G+ +PP
Sbjct: 264 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 318
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 81 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 140
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV F N+ + E A+ + G +G + R ++ +
Sbjct: 141 GFVSFYNKLDGENAIVHMGGQWLGGRQIRTNWATR 175
>gi|54303906|gb|AAV33303.1| aging-associated gene 7 protein [Homo sapiens]
Length = 374
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 21/115 (18%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 204 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 263
Query: 115 VI---------GKQS-------FRADYGN--QWSGAYYGGQVYDGY---GYAIPP 148
I GK+S + DY QWS Y Q Y Y G+ +PP
Sbjct: 264 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 318
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 81 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 140
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV F N+ +AE A+ + G +G + R ++ +
Sbjct: 141 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR 175
>gi|417410125|gb|JAA51540.1| Putative apoptosis-promoting rna-binding protein tia-1/tiar rrm
superfamily, partial [Desmodus rotundus]
Length = 367
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 21/115 (18%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 195 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 254
Query: 115 VI---------GKQS-------FRADYGN--QWSGAYYGGQVYDGY---GYAIPP 148
I GK+S + DY QWS Y Q Y Y G+ +PP
Sbjct: 255 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 309
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 72 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 131
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV F N+ +AE A+ + G +G + R ++ +
Sbjct: 132 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR 166
>gi|14714709|gb|AAH10496.1| Tial1 protein [Mus musculus]
gi|148685700|gb|EDL17647.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_a [Mus musculus]
gi|149067624|gb|EDM17176.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1
(mapped), isoform CRA_d [Rattus norvegicus]
Length = 375
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 21/115 (18%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 204 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 263
Query: 115 VI---------GKQS-------FRADYGN--QWSGAYYGGQVYDGY---GYAIPP 148
I GK+S + DY QWS Y Q Y Y G+ +PP
Sbjct: 264 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 318
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 81 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 140
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV F N+ +AE A+ + G +G + R ++ +
Sbjct: 141 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR 175
>gi|431895395|gb|ELK04911.1| Nucleolysin TIAR [Pteropus alecto]
Length = 428
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 21/115 (18%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 257 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 316
Query: 115 VI---------GKQS-------FRADYGN--QWSGAYYGGQVYDGY---GYAIPP 148
I GK+S + DY QWS Y Q Y Y G+ +PP
Sbjct: 317 AIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 371
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 134 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 193
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV F N+ +AE A+ + G +G + R ++ +
Sbjct: 194 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR 228
>gi|426201609|gb|EKV51532.1| hypothetical protein AGABI2DRAFT_189771 [Agaricus bisporus var.
bisporus H97]
Length = 469
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 54/91 (59%), Gaps = 7/91 (7%)
Query: 45 QGPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQ 97
QG Q++ D+S + +FVG L P V D+ L + FS +G ++ ++ +G GF+
Sbjct: 95 QGQQNKEDTSGHYHVFVGDLSPEVNDDVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLA 154
Query: 98 FANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
F ++ +AE+A+ +NG +G ++ R ++ NQ
Sbjct: 155 FRDKTDAEQAIATMNGEWLGSRAIRVNWANQ 185
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 79/184 (42%), Gaps = 24/184 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQ-QYSSQGGYASNGAPGQ-----GPQS----- 49
+ MNG + SR +R+ A + G Q S + ++ GAP GP S
Sbjct: 165 IATMNGEWLGSRAIRVNWANQKTQGGAPAVQQSPRPAGSTGGAPAPINFQGGPLSYESVV 224
Query: 50 -EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
+ + NTT++VG L P T DL F G ++ +++ +G FV+ E+A A+
Sbjct: 225 QQTPAYNTTVYVGNLVPYCTQADLIPLFQSIGYLSEIRMQADRGFAFVKLDTHEHAAMAI 284
Query: 109 HKLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPVY 168
+L G ++ + + +G + DG A P P+ A Y + P+Y
Sbjct: 285 VQLQGQMVHGRPIKCSWGKDRA---------DGTAAAQPAAMSPT---TTATPYASMPMY 332
Query: 169 GSHQ 172
G Q
Sbjct: 333 GMPQ 336
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 13/95 (13%)
Query: 41 GAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-------GKGC 93
G P + P+ ++VG L P VT+ L + F+ G + VKI G
Sbjct: 7 GGPAEAPR------RAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNY 60
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV++ + +AE AL LNG I R ++ Q
Sbjct: 61 GFVEYMDMRSAETALQTLNGRKIFDTEIRVNWAYQ 95
>gi|242066226|ref|XP_002454402.1| hypothetical protein SORBIDRAFT_04g030200 [Sorghum bicolor]
gi|241934233|gb|EES07378.1| hypothetical protein SORBIDRAFT_04g030200 [Sorghum bicolor]
Length = 491
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 42/67 (62%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D + T+++GGLD +T++DLR F +GEI S+++ + + FV + RE AE+A +L
Sbjct: 224 DETIRTLYIGGLDNRITEQDLRDQFYAHGEIESIRMVLQRAIAFVTYTTREGAEKAAEEL 283
Query: 112 NGTVIGK 118
++ K
Sbjct: 284 ANKLVIK 290
>gi|195395200|ref|XP_002056224.1| GJ10336 [Drosophila virilis]
gi|194142933|gb|EDW59336.1| GJ10336 [Drosophila virilis]
Length = 427
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANR 101
QS D S ++FVG + T+E L++ FS+ G + S+K+ KG GF ++ ++
Sbjct: 8 QSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQ 67
Query: 102 ENAEEALHKLNGTVIGKQSFRADYG------NQWSGAYYGGQVYDGYGYAIPPPNDPSMY 155
E A A+ LNG IG ++ R D + G QV + YG P + P +
Sbjct: 68 ETALSAMRNLNGYEIGGRTLRVDNACTEKSRMEMQQLLQGPQVENPYGEPCDPDDAPELI 127
Query: 156 AAAAAAYGAYPVYGSHQQ 173
A+ +Y +Q
Sbjct: 128 TKTVASLPPEQMYELMKQ 145
>gi|193648018|ref|XP_001950341.1| PREDICTED: nucleolysin TIAR-like [Acyrthosiphon pisum]
Length = 388
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 23/124 (18%)
Query: 40 NGAPGQGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 92
N A G Q + D+SN IFVG L P + L++ F+ +GEI++ +I KG
Sbjct: 79 NWATTPGNQPKLDTSNHYHIFVGDLSPEIETHTLKEAFAPFGEISNCRIVRDPQTLKSKG 138
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDP 152
FV F + +AE A++ +NG +G +S R ++ + PPP P
Sbjct: 139 YAFVSFVKKSDAENAINSMNGQWLGSRSIRTNWSTR----------------KPPPPRAP 182
Query: 153 SMYA 156
+ Y+
Sbjct: 183 NKYS 186
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 61/136 (44%), Gaps = 20/136 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAAT--------PRKSSGYQQQYSSQGGYASNGAPGQGPQSEGD 52
+ MNG + SR +R +T P K SGY+ ++
Sbjct: 154 INSMNGQWLGSRSIRTNWSTRKPPPPRAPNKYSGYR------------AVTFDDVYNQSS 201
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
+N T++ GG+ +T+E + Q FS++G I ++ KG F++F+ +E A A+ ++
Sbjct: 202 PTNCTVYCGGIVEGLTEELVEQVFSRFGTIVEIRAFRDKGYAFIKFSTKEAATTAIEAVH 261
Query: 113 GTVIGKQSFRADYGNQ 128
T I + +G +
Sbjct: 262 NTEINGHPVKCFWGKE 277
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 52 DSSN-TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEA 107
D SN T++VG LDP+VT+E L F+ G + + K+ P F++F A A
Sbjct: 3 DESNPRTLYVGNLDPSVTEELLCALFTNIGPVNACKVIREPGSDPYAFLEFDTHSGAATA 62
Query: 108 LHKLNGTVIGKQSFRADY----GNQ 128
L +NG + + + ++ GNQ
Sbjct: 63 LAAMNGRLFLDKEMKVNWATTPGNQ 87
>gi|119569772|gb|EAW49387.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_c [Homo sapiens]
Length = 336
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 21/115 (18%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 165 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 224
Query: 115 VI---------GKQS-------FRADYGN--QWSGAYYGGQVYDGY---GYAIPP 148
I GK+S + DY QWS Y Q Y Y G+ +PP
Sbjct: 225 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 279
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 42 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 101
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV F N+ +AE A+ + G +G + R ++ +
Sbjct: 102 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR 136
>gi|409083337|gb|EKM83694.1| hypothetical protein AGABI1DRAFT_110331 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 444
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 54/91 (59%), Gaps = 7/91 (7%)
Query: 45 QGPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQ 97
QG Q++ D+S + +FVG L P V D+ L + FS +G ++ ++ +G GF+
Sbjct: 95 QGQQNKEDTSGHYHVFVGDLSPEVNDDVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLA 154
Query: 98 FANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
F ++ +AE+A+ +NG +G ++ R ++ NQ
Sbjct: 155 FRDKTDAEQAIATMNGEWLGSRAIRVNWANQ 185
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 79/184 (42%), Gaps = 24/184 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQ-QYSSQGGYASNGAPGQ-----GPQS----- 49
+ MNG + SR +R+ A + G Q S + ++ GAP GP S
Sbjct: 165 IATMNGEWLGSRAIRVNWANQKTQGGAPAVQQSPRPAGSTGGAPAPINFQGGPLSYESVV 224
Query: 50 -EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
+ + NTT++VG L P T DL F G ++ +++ +G FV+ E+A A+
Sbjct: 225 QQTPAYNTTVYVGNLVPYCTQADLIPLFQSIGYLSEIRMQADRGFAFVKLDTHEHAAMAI 284
Query: 109 HKLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPVY 168
+L G ++ + + +G + DG A P P+ A Y + P+Y
Sbjct: 285 VQLQGQMVHGRPIKCSWGKDRA---------DGTAAAQPAAMSPT---TTATPYASMPMY 332
Query: 169 GSHQ 172
G Q
Sbjct: 333 GMPQ 336
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-------GKGCGFVQFANRENAEEALHK 110
++VG L P VT+ L + F+ G + VKI G GFV++ + +AE AL
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRSAETALQT 77
Query: 111 LNGTVIGKQSFRADYGNQ 128
LNG I R ++ Q
Sbjct: 78 LNGRKIFDTEIRVNWAYQ 95
>gi|4507499|ref|NP_003243.1| nucleolysin TIAR isoform 1 [Homo sapiens]
gi|194205608|ref|XP_001492932.2| PREDICTED: nucleolysin TIAR isoform 2 [Equus caballus]
gi|311271909|ref|XP_001928970.2| PREDICTED: nucleolysin TIAR isoform 1 [Sus scrofa]
gi|332835148|ref|XP_001154534.2| PREDICTED: nucleolysin TIAR isoform 2 [Pan troglodytes]
gi|345792875|ref|XP_865423.2| PREDICTED: nucleolysin TIAR isoform 18 [Canis lupus familiaris]
gi|390473245|ref|XP_002756491.2| PREDICTED: nucleolysin TIAR isoform 1 [Callithrix jacchus]
gi|395827975|ref|XP_003787163.1| PREDICTED: nucleolysin TIAR isoform 2 [Otolemur garnettii]
gi|397510637|ref|XP_003825699.1| PREDICTED: nucleolysin TIAR isoform 1 [Pan paniscus]
gi|402881650|ref|XP_003904379.1| PREDICTED: nucleolysin TIAR isoform 1 [Papio anubis]
gi|403259379|ref|XP_003922194.1| PREDICTED: nucleolysin TIAR [Saimiri boliviensis boliviensis]
gi|426253184|ref|XP_004020280.1| PREDICTED: nucleolysin TIAR isoform 1 [Ovis aries]
gi|426366372|ref|XP_004050232.1| PREDICTED: nucleolysin TIAR isoform 1 [Gorilla gorilla gorilla]
gi|267131|sp|Q01085.1|TIAR_HUMAN RecName: Full=Nucleolysin TIAR; AltName: Full=TIA-1-related protein
gi|189310|gb|AAA36384.1| nucleolysin TIAR [Homo sapiens]
gi|158254826|dbj|BAF83384.1| unnamed protein product [Homo sapiens]
gi|261858270|dbj|BAI45657.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1
[synthetic construct]
gi|380783711|gb|AFE63731.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|383408329|gb|AFH27378.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|384942770|gb|AFI34990.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|410218474|gb|JAA06456.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410257382|gb|JAA16658.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410296996|gb|JAA27098.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
Length = 375
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 21/115 (18%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 204 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 263
Query: 115 VI---------GKQS-------FRADYGN--QWSGAYYGGQVYDGY---GYAIPP 148
I GK+S + DY QWS Y Q Y Y G+ +PP
Sbjct: 264 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 318
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 81 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 140
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV F N+ +AE A+ + G +G + R ++ +
Sbjct: 141 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR 175
>gi|361127946|gb|EHK99901.1| putative Nucleolysin TIA-1 [Glarea lozoyensis 74030]
Length = 505
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E S++ IFVG L V DE L Q FS +G ++ ++ +G GFV F R++
Sbjct: 177 EDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERQD 236
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
AE+AL ++G +G ++ R ++ NQ
Sbjct: 237 AEKALSSMDGEWLGSRAIRCNWANQ 261
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 19/130 (14%)
Query: 10 SSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTD 69
++ P+ +P +G S GG+ AP + + ++VGGLDP VT+
Sbjct: 49 NTNPIPTAITSPMGENGGVMSPDSAGGFVRRAAP--------EPNKRALYVGGLDPRVTE 100
Query: 70 EDLRQPFSQYGEIASVKIPVGKGC-----------GFVQFANRENAEEALHKLNGTVIGK 118
+ LRQ F G + VKI K GFV++ + AE A+ LNG + +
Sbjct: 101 DVLRQIFETTGHVQHVKIIPDKNVGAEQQAKGFNYGFVEYDDPGAAERAMQTLNGRRVHQ 160
Query: 119 QSFRADYGNQ 128
R ++ Q
Sbjct: 161 AEIRVNWAYQ 170
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR--KSSGYQQQYSSQG-----GYASNGAPGQGPQS---- 49
++ M+G + SR +R A + S QQQ S+ G + + P G QS
Sbjct: 241 LSSMDGEWLGSRAIRCNWANQKGQPSISQQQQMSAMGMTPTTPFGHHHFPTHGVQSFDMI 300
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ + TT +VG L P T DL F +G + + +G FV+ ENA A
Sbjct: 301 VQQTPAWQTTCYVGNLTPYTTQNDLIPLFQNFGFVVETRFQADRGFAFVKMDTHENAAMA 360
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ +L+G + + + +G
Sbjct: 361 ICQLSGYNVNGRPLKCSWG 379
>gi|255934068|ref|XP_002558315.1| Pc12g15120 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582934|emb|CAP81139.1| Pc12g15120 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 496
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 15/104 (14%)
Query: 32 SSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---- 87
+S GGY AP + + ++VGGLDP VT++ L+Q F G + SVKI
Sbjct: 75 TSAGGYVRRAAP--------EPNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDK 126
Query: 88 ---PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
G GFV+F + AE A+ LNG I + R ++ Q
Sbjct: 127 NFTTKGHNYGFVEFDDPGAAERAMQTLNGRRIHQSEIRVNWAYQ 170
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 49 SEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANR 101
S+ D+SN IFVG L V DE L Q FS +G ++ ++ +G GFV F +R
Sbjct: 175 SKEDTSNHFHIFVGDLSNEVNDEVLTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDR 234
Query: 102 ENAEEALHKLNGTVIGKQSFRADYGNQ 128
A++AL+ ++G +G ++ R ++ NQ
Sbjct: 235 AEADKALNSMDGEWLGSRAIRCNWANQ 261
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 57/139 (41%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQ-------YSSQGGYASNGAPGQGPQS---- 49
+ M+G + SR +R A + QQ + + + P G QS
Sbjct: 241 LNSMDGEWLGSRAIRCNWANQKGQPSISQQQALVAMGMTPTTPFGHHHFPTHGIQSYDMV 300
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T DL F +G + ++ +G FV+ + ENA A
Sbjct: 301 AQQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVLETRLQADRGFAFVKMDSHENAASA 360
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ +LNG + + + +G
Sbjct: 361 ICQLNGYNVNGRPLKCSWG 379
>gi|354500962|ref|XP_003512565.1| PREDICTED: nucleolysin TIAR [Cricetulus griseus]
Length = 336
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 21/115 (18%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 165 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 224
Query: 115 VI---------GKQS-------FRADYGN--QWSGAYYGGQVYDGY---GYAIPP 148
I GK+S + DY QWS Y Q Y Y G+ +PP
Sbjct: 225 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 279
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 42 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 101
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV F N+ +AE A+ + G +G + R ++ +
Sbjct: 102 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR 136
>gi|297301957|ref|XP_001098541.2| PREDICTED: nucleolysin TIAR isoform 5 [Macaca mulatta]
Length = 506
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 21/115 (18%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 335 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 394
Query: 115 VI---------GKQS-------FRADYGN--QWSGAYYGGQVYDGY---GYAIPP 148
I GK+S + DY QWS Y Q Y Y G+ +PP
Sbjct: 395 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 449
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 212 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 271
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV F N+ +AE A+ + G +G + R ++ +
Sbjct: 272 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR 306
>gi|443687463|gb|ELT90434.1| hypothetical protein CAPTEDRAFT_110688, partial [Capitella teleta]
Length = 353
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 15/124 (12%)
Query: 10 SSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSS-NTTIFVGGLDPNVT 68
SS + +G R G + + N A G Q++ D+S + IFVG L P++
Sbjct: 47 SSAALALGTMNKRTCFGREMKV--------NWATSPGTQTKQDTSKHHHIFVGDLSPDIE 98
Query: 69 DEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
LR+ F +G I+ KI KG GFV + R+ AE A++ +NG IG ++ R
Sbjct: 99 TPQLREAFKPFGTISDCKIIRDPQTLKSKGYGFVSYVERKEAENAINSMNGQWIGSRAIR 158
Query: 123 ADYG 126
++
Sbjct: 159 TNWA 162
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 65/128 (50%), Gaps = 6/128 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ MNG + SR +R A + ++ ++ ++Q P +N T++
Sbjct: 144 INSMNGQWIGSRAIRTNWAIRKPAAPATKETNAQPLTFDEVFKKSSP------TNCTVYC 197
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +R F ++G+I +++ KG F+++ +E A EA+ K++ T +G +
Sbjct: 198 GGILSGLTEDLVRSAFGEHGKIEEIRVFKDKGYAFIRYNTKEAATEAIVKMHQTEVGGHT 257
Query: 121 FRADYGNQ 128
+ +G +
Sbjct: 258 VKCSWGKE 265
>gi|384249677|gb|EIE23158.1| hypothetical protein COCSUDRAFT_42089 [Coccomyxa subellipsoidea
C-169]
Length = 986
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCG 94
G G +GD T ++VG L P++ +E L++ F ++G+IASVKI G+ CG
Sbjct: 157 GAGSFDDGDPYTTNLYVGNLAPDIDEEVLKREFGRFGDIASVKIMWPRDEDQRRRGRNCG 216
Query: 95 FVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
FV F R A+ A LNG ++ + +G
Sbjct: 217 FVAFMTRAGADRAKADLNGAILHDLELKLGWG 248
>gi|297687491|ref|XP_002821246.1| PREDICTED: nucleolysin TIAR isoform 1 [Pongo abelii]
gi|410976205|ref|XP_003994513.1| PREDICTED: nucleolysin TIAR isoform 1 [Felis catus]
Length = 376
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 21/115 (18%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 205 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 264
Query: 115 VI---------GKQS-------FRADYGN--QWSGAYYGGQVYDGY---GYAIPP 148
I GK+S + DY QWS Y Q Y Y G+ +PP
Sbjct: 265 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 319
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 111
+FVG L P +T ED++ F+ +G+I+ ++ KG GFV F N+ +AE A+ +
Sbjct: 100 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 159
Query: 112 NGTVIGKQSFRADYGNQ 128
G +G + R ++ +
Sbjct: 160 GGQWLGGRQIRTNWATR 176
>gi|391347718|ref|XP_003748102.1| PREDICTED: protein no-on-transient A-like [Metaseiulus
occidentalis]
Length = 563
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 46/89 (51%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
N P Q P + SS +F+G L P++T++ +R +G + + +P GKG F ++
Sbjct: 116 NQTPDQIPVKKDSSSKCRLFIGNLIPDITEDGMRNLLEPFGNLVELFVPPGKGFAFARYE 175
Query: 100 NRENAEEALHKLNGTVIGKQSFRADYGNQ 128
R NAE A L+G + + + + +Q
Sbjct: 176 TRANAEAAKSALDGELFSNRQLQVRFASQ 204
>gi|347967649|ref|XP_312633.5| AGAP002335-PA [Anopheles gambiae str. PEST]
gi|333468363|gb|EAA07505.5| AGAP002335-PA [Anopheles gambiae str. PEST]
Length = 458
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 40 NGAPGQGPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 92
N A G Q + D+S + IFVG L P + E LR+ F+ +GEI++ +I +G
Sbjct: 79 NWATSAGNQPKTDTSQHHHIFVGDLSPEIDTETLREAFAPFGEISNCRIVRDPQTLKSRG 138
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
FV F + AE A+ +NG +G +S R ++ +
Sbjct: 139 YAFVSFVKKAEAENAIAMMNGQWLGSRSIRTNWSTR 174
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 67/132 (50%), Gaps = 16/132 (12%)
Query: 4 MNGVYCSSRPMRIGAAT-----PRKSSGYQQQYSSQGGYASNGAPG-QGPQSEGDSSNTT 57
MNG + SR +R +T PR++S G S PG + + +NTT
Sbjct: 157 MNGQWLGSRSIRTNWSTRKPPAPRENSK---------GIKSGKTPGFEEIYNNTSPTNTT 207
Query: 58 IFVGGLDPN-VTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
++ GG PN +TDE +++ F+Q+G I ++ KG F++FA++E+A A+ + + +
Sbjct: 208 VYCGGFPPNAITDELIQKHFAQFGHINDTRVFKDKGYAFIRFASKESAARAIEGTHNSEV 267
Query: 117 GKQSFRADYGNQ 128
+ +G +
Sbjct: 268 QGHPVKCYWGKE 279
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC---GFVQFANRENAEEALHKLNG 113
T++VG LD +VT+E L FSQ G + S KI F+++AN ++A+ AL +N
Sbjct: 9 TLYVGNLDTSVTEELLCTLFSQMGTVKSCKIIRETSIDPFAFIEYANHQSAQTALAAMNK 68
Query: 114 TVIGKQSFRADY----GNQ 128
+ K+ R ++ GNQ
Sbjct: 69 RMFLKKEIRVNWATSAGNQ 87
>gi|168011117|ref|XP_001758250.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690706|gb|EDQ77072.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1252
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIG 117
++VGG+ PNVT E + F YG + K+ + C FV + E+A A+ LN IG
Sbjct: 176 LWVGGISPNVTKEQIEGEFRNYGVLEDFKLLRERNCAFVDYIRIEDAVNAVEALNRKRIG 235
Query: 118 KQSFRADYG 126
+ R DYG
Sbjct: 236 DEELRVDYG 244
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 4/117 (3%)
Query: 3 EMNGVYCSSRPMRIGAATPRKSS--GYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
E+ Y S+P + + +KSS GY Q+ QGG + NG G+ + + ++V
Sbjct: 238 ELRVDYGRSQPSKRDSRGDQKSSQDGYNSQHGLQGG-SGNGVEGRVKADKDGGPSEILWV 296
Query: 61 GGLDPNVTDED-LRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
G P+ DED LR+ F YGE+ VK G+ FVQF E A A + L+G +
Sbjct: 297 GFPLPSKVDEDGLRRAFMPYGEVERVKTFPGRTYAFVQFQKVEEATRAKNALDGKLF 353
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIG 117
+++G + + T+ +R+ FSQ G++ SV + + FV F N +A EA ++L G VIG
Sbjct: 71 LWIGNVSHDATEAAIREKFSQIGDVDSVTVYSSRNYAFVNFRNLHDAVEAKNRLQGFVIG 130
Query: 118 KQSFRADYGN 127
+ R +Y
Sbjct: 131 GMAIRIEYAK 140
>gi|443697641|gb|ELT98008.1| hypothetical protein CAPTEDRAFT_123077 [Capitella teleta]
Length = 416
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Query: 52 DSSNTTIFVGGL-DPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK 110
D S T++VG L + +T+ DLR F Q+GE+ +V + + + C F+QF R AEEA+ K
Sbjct: 231 DKSVCTLYVGNLGEDEITETDLRNYFYQFGELRAVSLVIRQQCAFIQFTTRAAAEEAVEK 290
Query: 111 -LNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPP 148
N V+ + +G GG G A+PP
Sbjct: 291 TFNKLVMHGRRLNIKWGKSPGQTADGGGNLVDTGPALPP 329
>gi|167525647|ref|XP_001747158.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774453|gb|EDQ88082.1| predicted protein [Monosiga brevicollis MX1]
Length = 409
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 47 PQSEG--DSSNTTIFVGGLDP--NVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRE 102
P++E D+S TT+++GG+ P N+T +DLR F ++ ++A+V++ + FV+FA RE
Sbjct: 239 PKAEAPADTSITTLYIGGVRPDLNITADDLRDYFEKHSQVAAVRLAPKQSAAFVEFATRE 298
Query: 103 NAEEALH-KLNGTVIGKQSFRADYGNQWSGAYYGGQ 137
AE+A+ +I + R +G S GG+
Sbjct: 299 GAEQAMEIAAVNCIIKGEPLRVMWGKARSNNNSGGR 334
>gi|46122133|ref|XP_385620.1| hypothetical protein FG05444.1 [Gibberella zeae PH-1]
Length = 783
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIG 117
+++G LD T+E LRQ FS+YGEI V K C FV F N NA +A+ + G
Sbjct: 512 VYIGNLDETWTEERLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAIRGRE-D 570
Query: 118 KQSFRADYGNQWSG----AYYGGQVYDGYGYAIPPPN 150
+ F+ ++G G Q G G + PPPN
Sbjct: 571 YRKFKVNFGKDRCGNPPRQMQQAQSPRGDGVSSPPPN 607
>gi|46949206|gb|AAT07459.1| cap-binding protein [Mirabilis jalapa]
Length = 147
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 37 YASNGAPG-QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG--- 92
Y PG Q E +TT+++G + T+E + + FS+ GEI + + + K
Sbjct: 14 YRDRRFPGNQEEFEEALKKSTTLYIGNMSFYTTEEQVYELFSRVGEIKKITMGLDKNSKT 73
Query: 93 -CG--FVQFANRENAEEALHKLNGTVIGKQSFRADY------GNQWSGAYYGGQVYDGY 142
CG FV + +RE+ E+A+ ++GT++ + R D+ G QW GGQV D Y
Sbjct: 74 PCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQEGRQWGRGRSGGQVRDEY 132
>gi|45361397|ref|NP_989276.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
gi|39795756|gb|AAH64164.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
Length = 386
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S + + ++ SN T++
Sbjct: 164 IAQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESN----TKQLTYEEVVNQSSPSNCTVYC 218
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I V++ KG FV+F++ E+A A+ +NGT I
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHV 278
Query: 121 FRADYGNQ 128
+ +G +
Sbjct: 279 VKCYWGKE 286
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 111
+FVG L P +T +D++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEITTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQM 167
Query: 112 NGTVIGKQSFRADYGNQ 128
G +G + R ++ +
Sbjct: 168 GGQWLGGRQIRTNWATR 184
>gi|392597176|gb|EIW86498.1| hypothetical protein CONPUDRAFT_78829 [Coniophora puteana
RWD-64-598 SS2]
Length = 439
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 54/91 (59%), Gaps = 7/91 (7%)
Query: 45 QGPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQ 97
QG Q++ D+S + +FVG L P V DE L + F+ +G ++ ++ +G GF+
Sbjct: 96 QGQQNKEDTSGHFHVFVGDLSPEVNDEVLAKAFAAFGTMSDARVMWDMNSGKSRGYGFLA 155
Query: 98 FANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
F ++ +AE+A+ +NG +G ++ R ++ NQ
Sbjct: 156 FRDKTDAEQAIATMNGEWLGSRAIRVNWANQ 186
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 16/120 (13%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
S N+T++VG L P T DL F G ++ +++ +G FV+ E+A A+ +L
Sbjct: 234 SYNSTVYVGNLVPYCTQADLIPLFQSIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQ 293
Query: 113 GTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPVYGSHQ 172
G ++ + + +G + DG A+ P A AA YG P+YG Q
Sbjct: 294 GQMVHGRPIKCSWGKDRT---------DGQATAMSP-------TATAAPYGNMPMYGMPQ 337
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 16/132 (12%)
Query: 41 GAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-------GKGC 93
G P + P+ ++VG L P VT+ L + F+ G + VKI G
Sbjct: 8 GGPAEAPR------RAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNY 61
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRAD--YGNQWSGAYYGGQVYDGYGYAIPPPND 151
GFV++ + AE AL LNG I R + Y Q + G + G P ND
Sbjct: 62 GFVEYLDMRAAETALQTLNGRKIFDTEIRVNWAYQGQQNKEDTSGHFHVFVGDLSPEVND 121
Query: 152 PSMYAAAAAAYG 163
+ A A AA+G
Sbjct: 122 -EVLAKAFAAFG 132
>gi|218200015|gb|EEC82442.1| hypothetical protein OsI_26865 [Oryza sativa Indica Group]
Length = 427
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 9/137 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQG-GYASNGAPGQGPQS------EGDS 53
+ ++NG + SR +R AT S+G QQ S+ +N G + E +
Sbjct: 208 INDLNGQWLGSRQIRCNWATKGASNGEQQTSDSKNVADLTNNLTEDGKEKANEDVPENNP 267
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGE--IASVKIPVGKGCGFVQFANRENAEEALHKL 111
T++VG L VT + L + F G I V+I +GKG GFV++++ A A+
Sbjct: 268 QYRTVYVGNLAHEVTQDVLHRLFHALGAGAIEEVRIQLGKGFGFVRYSSHTEAALAIQMG 327
Query: 112 NGTVIGKQSFRADYGNQ 128
NG ++G + + +GN+
Sbjct: 328 NGRILGGKPIKCSWGNK 344
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANR 101
Q E + + IFVG L P VTD L FS Y + ++ +G GFV F N+
Sbjct: 142 QREDTTDHFNIFVGDLSPEVTDSALFAFFSGYSSCSDARVMWDQKTGRSRGYGFVSFRNQ 201
Query: 102 ENAEEALHKLNGTVIGKQSFRADYGNQ 128
++A+ A++ LNG +G + R ++ +
Sbjct: 202 QDAQSAINDLNGQWLGSRQIRCNWATK 228
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 15/113 (13%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC--GFVQFANRENAEEALHK 110
S+ +++VG + VT+ LR+ F G + K+ + GFV + +R +A A+
Sbjct: 62 STCRSVYVGNVHVQVTEALLREVFQSTGLVEGCKLIRKEKSSYGFVDYYDRRSAALAILT 121
Query: 111 LNGTVIGKQSFRADYGNQWSGAYYGGQVYDG-------YGYAIPPPNDPSMYA 156
LNG I Q R ++ AY GQ D G P D +++A
Sbjct: 122 LNGKQIFGQLIRVNW------AYASGQREDTTDHFNIFVGDLSPEVTDSALFA 168
>gi|451798952|gb|AGF69179.1| polyadenylate-binding protein 2-like protein, partial [Triticum
aestivum]
Length = 497
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 5/64 (7%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANRENAEEALHKLN 112
+++ LD +TD+ LR+ FS +G+I S KI V KG GFV F+ RE A +AL ++N
Sbjct: 207 LYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQNGVSKGSGFVSFSTREEASQALTEMN 266
Query: 113 GTVI 116
G +I
Sbjct: 267 GKMI 270
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEA 107
S + IF+ LD + ++ L FS +G I S K+ + KG GFVQ+ E+A+ A
Sbjct: 8 SGSANIFIKNLDKTIDNKTLHDTFSAFGAILSCKVAMDDIGQSKGFGFVQYEKEESAQSA 67
Query: 108 LHKLNGTVI 116
+ LNG +I
Sbjct: 68 MKSLNGMLI 76
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG-----KGCGFVQFANRENAEEALHKLN 112
+FV L + T +DL + FS YG I S + +G + FV F + ++A A+ +LN
Sbjct: 104 VFVKNLSESTTKDDLVKVFSGYGTITSAVVMIGMDGKSRCFDFVNFESPDDAARAVEELN 163
Query: 113 GTVIGKQSF 121
G I + +
Sbjct: 164 GKKINDKEW 172
>gi|281338083|gb|EFB13667.1| hypothetical protein PANDA_003438 [Ailuropoda melanoleuca]
Length = 340
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 21/115 (18%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 210 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 269
Query: 115 VI---------GKQS-------FRADYGN--QWSGAYYGGQVYDGY---GYAIPP 148
I GK+S + DY QWS Y Q Y Y G+ +PP
Sbjct: 270 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 324
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 87 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 146
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV F N+ +AE A+ + G +G + R ++ +
Sbjct: 147 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR 181
>gi|408397158|gb|EKJ76308.1| hypothetical protein FPSE_03563 [Fusarium pseudograminearum CS3096]
Length = 783
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIG 117
+++G LD T+E LRQ FS+YGEI V K C FV F N NA +A+ + G
Sbjct: 512 VYIGNLDETWTEERLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAIRGRE-D 570
Query: 118 KQSFRADYGNQWSG----AYYGGQVYDGYGYAIPPPN 150
+ F+ ++G G Q G G + PPPN
Sbjct: 571 YRKFKVNFGKDRCGNPPRQMQQAQSPRGDGVSSPPPN 607
>gi|224460055|gb|ACN43578.1| nuclear cap-binding protein [Nicotiana tabacum]
gi|261866539|gb|ACY02034.1| cap binding protein 20 [Nicotiana tabacum]
Length = 254
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 12/99 (12%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG------FVQFANRENAEEALH 109
TT++VG + T+E + + FS+ GEI + + + K C FV F +R++ E+++
Sbjct: 34 TTVYVGNMSFYTTEEQVYELFSRAGEIKKIVMGLDKNCKTPCGFCFVMFYSRDDTEDSVK 93
Query: 110 KLNGTVIGKQSFRADY------GNQWSGAYYGGQVYDGY 142
++GT++ + R D+ G QW GGQV D Y
Sbjct: 94 YISGTILDDRPIRVDFDWGFQEGRQWGRGRSGGQVRDEY 132
>gi|302654241|ref|XP_003018929.1| hypothetical protein TRV_07061 [Trichophyton verrucosum HKI 0517]
gi|291182617|gb|EFE38284.1| hypothetical protein TRV_07061 [Trichophyton verrucosum HKI 0517]
Length = 543
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 11/108 (10%)
Query: 27 YQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVK 86
+Q + Y SN A E SS+ IFVG L V DE L Q FS G ++ +
Sbjct: 206 HQSEIRVNWAYQSNTA-----SKEDTSSHFHIFVGDLSNEVNDEVLLQAFSACGSVSEAR 260
Query: 87 IPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
+ +G GFV F R +AE+AL ++G +G ++ R ++ NQ
Sbjct: 261 VMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQ 308
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGG------YASNGAPGQGPQS---- 49
++ M+G + SR +R A + + S QQQ + G + + P G QS
Sbjct: 288 LSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMV 347
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T DL F +G + + +G FV+ ENA A
Sbjct: 348 VQQTPQWQTTCYVGNLTPYTTQNDLIPLFQNFGYVVETRFQADRGFAFVKMDTHENAAMA 407
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ +LNG + + + +G
Sbjct: 408 ICQLNGYNVNGRPLKCSWG 426
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 55/156 (35%), Gaps = 51/156 (32%)
Query: 16 IGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQP 75
I A SG ++ GGY AP + + ++VGGLDP VT++ L+Q
Sbjct: 70 IPTAITSPMSGNMMSPTAAGGYVRRSAP--------EPNKRALYVGGLDPRVTEDILKQI 121
Query: 76 FSQYGEIASVKIPVGKGC------------------------------------------ 93
F G + SVKI K
Sbjct: 122 FETTGHVQSVKIIPDKNVSQHLLLLYLSDLYLFFTYVLYVYLYLITSALLLVIFQSKGLN 181
Query: 94 -GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GF+++ + AE A+ LNG + + R ++ Q
Sbjct: 182 YGFIEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQ 217
>gi|255553647|ref|XP_002517864.1| 20 kD nuclear cap binding protein, putative [Ricinus communis]
gi|223542846|gb|EEF44382.1| 20 kD nuclear cap binding protein, putative [Ricinus communis]
Length = 255
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG----CGF--VQFANRENAEEA 107
++TT+++G + T+E + + FS+ GEI + + + K CGF V F +RE+ E+A
Sbjct: 32 TSTTVYIGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLFYSREDTEDA 91
Query: 108 LHKLNGTVIGKQSFRADY------GNQWSGAYYGGQVYDGY 142
+ ++GT++ + R D+ G QW GGQV D Y
Sbjct: 92 VKYISGTILDDRPIRVDFDWGFQEGRQWGRGRSGGQVRDEY 132
>gi|256084514|ref|XP_002578473.1| hypothetical protein [Schistosoma mansoni]
gi|353229225|emb|CCD75396.1| hypothetical protein Smp_161730 [Schistosoma mansoni]
Length = 1232
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 9/73 (12%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFAN 100
+GD + T +F+G L+P +T++ L + F +YG +ASVKI G+ CGFV F N
Sbjct: 218 DGDRTTTNLFLGNLNPKMTEQQLCEAFGRYGPLASVKIMWPRTEEERSRGRNCGFVAFMN 277
Query: 101 RENAEEALHKLNG 113
R++ E AL + G
Sbjct: 278 RKDGERALDNIRG 290
>gi|89272716|emb|CAJ83609.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
Length = 389
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S + + ++ SN T++
Sbjct: 164 IAQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESN----TKQLTYEEVVNQSSPSNCTVYC 218
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I V++ KG FV+F++ E+A A+ +NGT I
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHV 278
Query: 121 FRADYGNQ 128
+ +G +
Sbjct: 279 VKCYWGKE 286
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 111
+FVG L P +T +D++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEITTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQM 167
Query: 112 NGTVIGKQSFRADYGNQ 128
G +G + R ++ +
Sbjct: 168 GGQWLGGRQIRTNWATR 184
>gi|242055771|ref|XP_002457031.1| hypothetical protein SORBIDRAFT_03g047450 [Sorghum bicolor]
gi|241929006|gb|EES02151.1| hypothetical protein SORBIDRAFT_03g047450 [Sorghum bicolor]
Length = 146
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 111
+F+GGL + + L+ FSQYG++ +V++ KG GFV+F++ A AL KL
Sbjct: 61 LFIGGLSYDTNETALKDAFSQYGDVIAVRVICHPTTGKSKGFGFVKFSSENQAAAALQKL 120
Query: 112 NGTVIGKQSFRADYGNQ-WSGA 132
NG V+ ++ R Y N W A
Sbjct: 121 NGQVLDGRNIRVHYANSTWGSA 142
>gi|301759213|ref|XP_002915456.1| PREDICTED: nucleolysin TIAR-like [Ailuropoda melanoleuca]
Length = 477
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 21/115 (18%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 306 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 365
Query: 115 VI---------GKQS-------FRADYGN--QWSGAYYGGQVYDGY---GYAIPP 148
I GK+S + DY QWS Y Q Y Y G+ +PP
Sbjct: 366 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 420
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 183 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 242
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV F N+ +AE A+ + G +G + R ++ +
Sbjct: 243 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR 277
>gi|258570067|ref|XP_002543837.1| OsGRP2 protein [Uncinocarpus reesii 1704]
gi|237904107|gb|EEP78508.1| OsGRP2 protein [Uncinocarpus reesii 1704]
Length = 370
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E S++ IFVG L V DE L Q FS +G ++ ++ +G GFV F R +
Sbjct: 83 EDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERAD 142
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
AE+AL ++G +G ++ R ++ NQ
Sbjct: 143 AEKALSSMDGEWLGSRAIRCNWANQ 167
>gi|357629028|gb|EHJ78065.1| putative RNA binding motif protein 22 [Danaus plexippus]
Length = 405
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT+++G L N+T+E+LR F QYGEI S+ + C FVQ+ R AE A K
Sbjct: 228 DRTVTTLYIGNLPENITEEELRGHFYQYGEIRSLTLVPRAQCAFVQYTTRSAAEHAAEKT 287
Query: 111 LNGTVIGKQSFRADYGN 127
N VI + +G
Sbjct: 288 FNRLVIAGRRLAIKWGK 304
>gi|428173494|gb|EKX42396.1| hypothetical protein GUITHDRAFT_74010 [Guillardia theta CCMP2712]
Length = 629
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/142 (30%), Positives = 65/142 (45%), Gaps = 18/142 (12%)
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGF 95
QG +GD + T ++VG L P +++E L + F +YG IASVKI + CGF
Sbjct: 159 QGSFDDGDENTTNLYVGNLHPQISEEMLMKEFGKYGPIASVKIMWPRTDEEKSRQRNCGF 218
Query: 96 VQFANRENAEEALHKLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPP--PNDPS 153
V +R++AE A LN GK+ F + W A G V YA+ P +P
Sbjct: 219 VNMMDRKSAEAAKDSLN----GKEFFGLEMKIGWGKAMSKGAV---PCYAMKPGEKEEPV 271
Query: 154 MYAAAAAAYGAYPVYGSHQQQV 175
M+ +P +Q +
Sbjct: 272 MFRRTGEVTVRFPKSNEVRQMI 293
>gi|302496843|ref|XP_003010422.1| hypothetical protein ARB_03123 [Arthroderma benhamiae CBS 112371]
gi|291173965|gb|EFE29782.1| hypothetical protein ARB_03123 [Arthroderma benhamiae CBS 112371]
Length = 541
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 11/108 (10%)
Query: 27 YQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVK 86
+Q + Y SN A E SS+ IFVG L V DE L Q FS G ++ +
Sbjct: 204 HQSEIRVNWAYQSNTA-----SKEDTSSHFHIFVGDLSNEVNDEVLLQAFSACGSVSEAR 258
Query: 87 IPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
+ +G GFV F R +AE+AL ++G +G ++ R ++ NQ
Sbjct: 259 VMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQ 306
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGG------YASNGAPGQGPQS---- 49
++ M+G + SR +R A + + S QQQ + G + + P G QS
Sbjct: 286 LSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMV 345
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T DL F +G + + +G FV+ ENA A
Sbjct: 346 VQQTPQWQTTCYVGNLTPYTTQNDLIPLFQNFGYVVETRFQADRGFAFVKMDTHENAAMA 405
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ +LNG + + + +G
Sbjct: 406 ICQLNGYNVNGRPLKCSWG 424
Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 55/154 (35%), Gaps = 49/154 (31%)
Query: 16 IGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQP 75
I A SG ++ GGY AP + + ++VGGLDP VT++ L+Q
Sbjct: 70 IPTAITSPMSGNMMSPTAAGGYVRRSAP--------EPNKRALYVGGLDPRVTEDILKQI 121
Query: 76 FSQYGEIASVKIPVGKGC-----------------------------------------G 94
F G + SVKI K G
Sbjct: 122 FETTGHVQSVKIIPDKNVSQRLLLLYLSDLYLFFVLYVYLNLITSALLLVIFQSKGLNYG 181
Query: 95 FVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
F+++ + AE A+ LNG + + R ++ Q
Sbjct: 182 FIEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQ 215
>gi|255556766|ref|XP_002519416.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223541279|gb|EEF42830.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 632
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 5/75 (6%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANRENAEE 106
D+ T ++V LDP +T+E L++ FS++G+I SV I +G GFV F N ++A
Sbjct: 188 DAKYTNLYVKNLDPGITEELLQEKFSEFGKIVSVAIARDECGSSRGFGFVNFENPDDARW 247
Query: 107 ALHKLNGTVIGKQSF 121
A+ ++NGT +G +
Sbjct: 248 AMERMNGTELGSKVL 262
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 18/126 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR--KSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTI 58
M MNG S+ + +G A R + ++Q+ + G + +
Sbjct: 249 MERMNGTELGSKVLYVGRAQKRAEREQILRRQFEEKRKEQITKFKG-----------SNV 297
Query: 59 FVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEALHKLNG 113
+V +D +VTDE+LR+ FSQ G I S K+ KG GFV F++ E A +A++ +G
Sbjct: 298 YVKNIDDDVTDEELREHFSQCGTITSAKLMKDDKGRSKGFGFVCFSSSEEASKAVNTFHG 357
Query: 114 TVIGKQ 119
+ ++
Sbjct: 358 YMFHRK 363
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEALHKLN 112
++V L ++ + L++ F ++G + S K+ KG GFVQF + ++A A+ KLN
Sbjct: 103 VYVKNLSESIDNVGLQELFGEFGTVLSCKVATFEDGKSKGHGFVQFESEDSANSAIEKLN 162
Query: 113 GTVIGKQSF 121
G+++G +
Sbjct: 163 GSIVGDKQI 171
>gi|296423176|ref|XP_002841131.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637365|emb|CAZ85322.1| unnamed protein product [Tuber melanosporum]
Length = 498
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 49 SEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANR 101
S+ D++N IFVG L V DE L Q FS +G ++ ++ +G GFV F +R
Sbjct: 168 SKEDTTNHFHIFVGDLSNEVNDEVLMQAFSTFGSVSEARVMWDMKTGRSRGYGFVAFRDR 227
Query: 102 ENAEEALHKLNGTVIGKQSFRADYGNQ 128
+AE+AL ++G +G ++ R ++ NQ
Sbjct: 228 ADAEKALSSMDGEWLGSRAIRCNWANQ 254
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 14/124 (11%)
Query: 10 SSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTD 69
++ P+ +P SG +S GG+ AP + + ++VGGLDP VT+
Sbjct: 49 NTNPIPTAITSPMSVSGVTSP-TSAGGFVRRAAP--------EPNKRALYVGGLDPRVTE 99
Query: 70 EDLRQPFSQYGEIASVKIPVGKGC-----GFVQFANRENAEEALHKLNGTVIGKQSFRAD 124
E L+Q F G + +VKI K GF+++ + AE A+ LNG I + R +
Sbjct: 100 EILKQIFETTGHVQNVKIIPDKNSKGYNYGFIEYDDPGAAERAMQTLNGRRIHQAEIRVN 159
Query: 125 YGNQ 128
+ Q
Sbjct: 160 WAYQ 163
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 67/173 (38%), Gaps = 22/173 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQ-------YSSQGGYASNGAPGQGPQS---- 49
++ M+G + SR +R A + QQ + Y + P G QS
Sbjct: 234 LSSMDGEWLGSRAIRCNWANQKGQPSISQQAAMAAMGMTPTTPYGHHNFPTHGVQSYDMI 293
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T DL F +G + + +G FV+ ENA A
Sbjct: 294 VQQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVETRFQADRGFAFVKMDTHENAAMA 353
Query: 108 LHKLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIP-----PPNDPSMY 155
+ +L+G + + + +G GQ +D Y P PP PS Y
Sbjct: 354 ICQLSGYNVNGRPLKCSWGKDRPPT---GQ-FDAYSPQQPNTPQYPPQTPSAY 402
>gi|22208507|gb|AAM94322.1| putative oligouridylate binding protein [Sorghum bicolor]
Length = 581
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 8/135 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQG---PQSEGDSSN-- 55
+ ++NG + +R +R AT ++G ++Q +NG G P +G SN
Sbjct: 210 INDLNGKWLGNRQIRCNWATKGANAGEEKQIVDSKVDLTNGTSESGKENPNEDGPESNPQ 269
Query: 56 -TTIFVGGLDPNVTDEDLRQPFSQYG--EIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
TT++VG L T+ D+ F G I V++ KG GFV+++ E A +A+ N
Sbjct: 270 FTTVYVGNLPHEATNNDVHLFFHSLGAGSIEEVRVTRDKGFGFVRYSTHEEAAQAIQMAN 329
Query: 113 GTVIGKQSFRADYGN 127
G +IG + + N
Sbjct: 330 GQLIGGRQIKTTIYN 344
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 17/131 (12%)
Query: 27 YQQQYSSQGGYASNGAPGQG-----------PQSEGDSSNTTIFVGGLDPNVTDEDLRQP 75
Y ++Y++ + NG P G Q E S + IFVG L P VTD L
Sbjct: 112 YDRRYAALAILSLNGRPLYGQPIKVNWAYTSTQREDTSGHFNIFVGDLCPEVTDATLFAF 171
Query: 76 FSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQW 129
FS Y + ++ +G GFV F N+++A+ A++ LNG +G + R ++ +
Sbjct: 172 FSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGNRQIRCNWATKG 231
Query: 130 SGAYYGGQVYD 140
+ A Q+ D
Sbjct: 232 ANAGEEKQIVD 242
>gi|148666752|gb|EDK99168.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_b
[Mus musculus]
Length = 293
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S S+ +N T++
Sbjct: 71 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VSQSSPNNCTVYC 125
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F++ E+A A+ +NGT I
Sbjct: 126 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHV 185
Query: 121 FRADYGNQ 128
+ +G +
Sbjct: 186 VKCYWGKE 193
>gi|340372441|ref|XP_003384752.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Amphimedon
queenslandica]
Length = 412
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D S T++++GGL ++++ DLR F Q+GEI + + + C F+ F R AE+A+ +
Sbjct: 228 DKSITSLYIGGLSDDISERDLRDHFYQFGEIEDINVIHKQNCAFITFTTRPAAEKAVEQT 287
Query: 112 NGTVIGK-QSFRADYGNQWSGAYYGG 136
+I K + +G SG GG
Sbjct: 288 FSKLIIKGNRLKVLWGRSQSGMIGGG 313
>gi|336389833|gb|EGO30976.1| hypothetical protein SERLADRAFT_455426 [Serpula lacrymans var.
lacrymans S7.9]
Length = 439
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 54/91 (59%), Gaps = 7/91 (7%)
Query: 45 QGPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQ 97
QG Q++ D++ + +FVG L P V DE L + FS +G ++ ++ +G GF+
Sbjct: 96 QGQQNKEDTTGHYHVFVGDLSPEVNDEILGKAFSAFGTMSDARVMWDMNSGKSRGYGFLA 155
Query: 98 FANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
F ++ +AE+A+ +NG +G ++ R ++ NQ
Sbjct: 156 FRDKTDAEQAIATMNGEWLGSRAIRVNWANQ 186
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 24/183 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQ-----GPQS------ 49
+ MNG + SR +R+ A +K+ G S A+ GAP GP S
Sbjct: 166 IATMNGEWLGSRAIRVNWAN-QKTQGSVAVASPPRPGATGGAPAPINFQGGPLSYDSVVQ 224
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 109
+ S N+T++VG L P T DL F G ++ +++ +G FV+ E+A A+
Sbjct: 225 QTPSYNSTVYVGNLVPYCTQADLIPLFQSIGYLSEIRMQADRGFAFVKLDTHEHAAMAIV 284
Query: 110 KLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPVYG 169
+L G ++ + + +G + DG P P A+A YG P+YG
Sbjct: 285 QLQGQMVHGRPIKCSWGKDRA---------DG---TTAQPGGPLSPTPASAPYGNLPMYG 332
Query: 170 SHQ 172
Q
Sbjct: 333 MPQ 335
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-------GKGCGFVQFANRENAEEALHK 110
++VG L P VT+ L + F+ G + VKI G GFV++ + AE AL
Sbjct: 19 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 78
Query: 111 LNGTVIGKQSFRADYGNQ 128
LNG I R ++ Q
Sbjct: 79 LNGRKIFDTEIRVNWAYQ 96
>gi|156058654|ref|XP_001595250.1| hypothetical protein SS1G_03339 [Sclerotinia sclerotiorum 1980]
gi|154701126|gb|EDO00865.1| hypothetical protein SS1G_03339 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 501
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 13/124 (10%)
Query: 10 SSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTD 69
++ P+ +P +G S GG+ AP + + ++VGGLDP VT+
Sbjct: 51 NTNPIPTAITSPMGENGGVMSPDSAGGFVRRAAP--------EPNKRALYVGGLDPRVTE 102
Query: 70 EDLRQPFSQYGEIASVKIPVGKGC-----GFVQFANRENAEEALHKLNGTVIGKQSFRAD 124
E LRQ F G + +VKI K GFV++ + AE A+ LNG + + R +
Sbjct: 103 EVLRQIFETTGHVQNVKIIPDKNSKGFNYGFVEYDDPGAAERAMQTLNGRRVHQAEIRVN 162
Query: 125 YGNQ 128
+ Q
Sbjct: 163 WAYQ 166
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E S++ IFVG L V DE L Q FS +G ++ ++ +G GF F R++
Sbjct: 173 EDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFAAFRERQD 232
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
AE+AL ++G +G ++ R ++ NQ
Sbjct: 233 AEKALSSMDGEWLGSRAIRCNWANQ 257
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGG------YASNGAPGQGPQS---- 49
++ M+G + SR +R A + + S QQQ S G + + P G QS
Sbjct: 237 LSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMSAMGMTPTTPFGHHHFPTHGVQSYDMI 296
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T +DL F +G + + +G FV+ + ENA A
Sbjct: 297 VQQTPQWQTTCYVGNLTPYTTQQDLVPLFQNFGYVVETRFQADRGFAFVKMDSHENAALA 356
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ +L+G + + + +G
Sbjct: 357 ICQLSGYNVNGRPLKCSWG 375
>gi|409051430|gb|EKM60906.1| hypothetical protein PHACADRAFT_247129 [Phanerochaete carnosa
HHB-10118-sp]
Length = 425
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 54/91 (59%), Gaps = 7/91 (7%)
Query: 45 QGPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQ 97
QG Q++ D++ + +FVG L P V DE L + F+ +G ++ ++ +G GF+
Sbjct: 92 QGQQNKEDTTGHYHVFVGDLSPEVNDEVLAKAFAAFGTLSDARVMWDMNSGKSRGYGFLA 151
Query: 98 FANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
F ++ +AE+A+ +NG +G ++ R ++ NQ
Sbjct: 152 FRDKTDAEQAIATMNGEWLGSRAIRVNWANQ 182
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 13/118 (11%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N+T++VG L P T DL F G ++ +++ +G FV+ E+A A+ +L G
Sbjct: 232 NSTVYVGNLVPYATQADLIPLFQSIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQ 291
Query: 115 VIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPVYGSHQ 172
++ + + +G + GG + G P AAA YG P+YG Q
Sbjct: 292 MVHGRPIKCSWGKDRAD---GGALTTGGMSPTP----------AAAPYGNMPMYGMPQ 336
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-------GKGCGFVQFANRENAEEALHK 110
++VG L P VT+ L + F+ G + VKI G GFV++ + AE AL
Sbjct: 15 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 74
Query: 111 LNGTVIGKQSFRADYGNQ 128
LNG I R ++ Q
Sbjct: 75 LNGRKIFDTEIRVNWAYQ 92
>gi|302904116|ref|XP_003049006.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729940|gb|EEU43293.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 474
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E S++ IFVG L V DE L Q FS +G ++ ++ +G GFV F +R +
Sbjct: 168 EDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPD 227
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
AE+AL ++G +G ++ R ++ NQ
Sbjct: 228 AEKALSSMDGEWLGSRAIRCNWANQ 252
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 34 QGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
QGG S + G ++ + + ++VGGLD VT++ LRQ F G + +VKI K
Sbjct: 62 QGGIMSPTSAGGFRRAAPEPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNA 121
Query: 94 -----GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV++ + AE A+ LNG + + R ++ Q
Sbjct: 122 RGYNYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQ 161
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 49/119 (41%), Gaps = 5/119 (4%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
S TT +VG L P T D+ F +G + + +G F++ ENA A+ ++N
Sbjct: 297 SWQTTCYVGNLTPYTTPNDVVPLFQNFGFVVESRFQADRGFAFIKMDTHENAAMAICQMN 356
Query: 113 GTVIGKQSFRADYGNQWS----GAYYGGQVYDGYGYAIPP-PNDPSMYAAAAAAYGAYP 166
G + + + +G + G + Q Y P P P+ Y A YG P
Sbjct: 357 GYNVNGRPLKCSWGKDKTPNAQGGFDPAQPYSPQSAQAPGYPGTPTFYPQYGAQYGGQP 415
>gi|116191711|ref|XP_001221668.1| hypothetical protein CHGG_05573 [Chaetomium globosum CBS 148.51]
gi|88181486|gb|EAQ88954.1| hypothetical protein CHGG_05573 [Chaetomium globosum CBS 148.51]
Length = 413
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E S++ IFVG L V DE L Q FS +G ++ ++ +G GFV F R +
Sbjct: 113 EDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERPD 172
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
AE+AL ++G +G ++ R ++ NQ
Sbjct: 173 AEKALSSMDGEWLGSRAIRCNWANQ 197
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 35/71 (49%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TT +VG L P T +D+ F +G + + +G FV+ ENA A+ +LNG
Sbjct: 245 TTCYVGNLTPYTTQQDIVPLFQNFGFVVESRFQADRGFSFVKMDTHENAAMAICQLNGYN 304
Query: 116 IGKQSFRADYG 126
+ + + +G
Sbjct: 305 VNGRPLKCSWG 315
>gi|350629665|gb|EHA18038.1| hypothetical protein ASPNIDRAFT_176547 [Aspergillus niger ATCC
1015]
Length = 496
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 55/120 (45%), Gaps = 15/120 (12%)
Query: 16 IGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQP 75
I A SG +S GG+ AP + + ++VGGLDP VT++ L+Q
Sbjct: 59 IPTAITSPMSGNMMSPTSAGGFVRRAAP--------EPNKRALYVGGLDPRVTEDILKQI 110
Query: 76 FSQYGEIASVKIPVGKGC-------GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
F G + SVKI K GFV+F + AE A+ LNG I + R ++ Q
Sbjct: 111 FETTGHVVSVKIIPDKNFNSKGYNYGFVEFDDPGAAERAMQTLNGRRIHQSEIRVNWAYQ 170
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E S++ IFVG L V DE L Q FS +G ++ ++ +G GFV F R +
Sbjct: 177 EDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSD 236
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
A++AL ++G +G ++ R ++ NQ
Sbjct: 237 ADKALSSMDGEWLGSRAIRCNWANQ 261
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGGYASNGA------PGQGPQS---- 49
++ M+G + SR +R A + + S QQQ + G A P G QS
Sbjct: 241 LSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMV 300
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T DL F +G + ++ +G F++ ENA A
Sbjct: 301 VQQTPQWQTTCYVGNLTPYTTQTDLVPLFQNFGYVIETRLQADRGFAFIKMDTHENAAMA 360
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ +LNG + + + +G
Sbjct: 361 ICQLNGYNVNGRPLKCSWG 379
>gi|315052890|ref|XP_003175819.1| nucleolysin TIA-1 [Arthroderma gypseum CBS 118893]
gi|311341134|gb|EFR00337.1| nucleolysin TIA-1 [Arthroderma gypseum CBS 118893]
Length = 506
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 11/108 (10%)
Query: 27 YQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVK 86
+Q + Y SN A E SS+ IFVG L V DE L Q FS G ++ +
Sbjct: 169 HQSEIRVNWAYQSNTA-----SKEDTSSHFHIFVGDLSNEVNDEVLLQAFSACGSVSEAR 223
Query: 87 IPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
+ +G GFV F R +AE+AL ++G +G ++ R ++ NQ
Sbjct: 224 VMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQ 271
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 55/124 (44%), Gaps = 19/124 (15%)
Query: 16 IGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQP 75
I A SG ++ GGY AP + + ++VGGLDP VT++ L+Q
Sbjct: 65 IPTAITSPMSGNMMSPTAAGGYVRRSAP--------EPNKRALYVGGLDPRVTEDILKQI 116
Query: 76 FSQYGEIASVKIPVGKGC-----------GFVQFANRENAEEALHKLNGTVIGKQSFRAD 124
F G + SVKI K GF+++ + AE A+ LNG + + R +
Sbjct: 117 FETTGHVQSVKIIPDKNASAQFQSKGLNYGFIEYDDPGAAERAMQTLNGRRVHQSEIRVN 176
Query: 125 YGNQ 128
+ Q
Sbjct: 177 WAYQ 180
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGG------YASNGAPGQGPQS---- 49
++ M+G + SR +R A + + S QQQ + G + + P G QS
Sbjct: 251 LSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMV 310
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T DL F +G + + +G FV+ ENA A
Sbjct: 311 VQQTPQWQTTCYVGNLTPYTTQNDLIPLFQNFGYVVETRFQADRGFAFVKMDTHENAAMA 370
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ +LNG + + + +G
Sbjct: 371 ICQLNGYNVNGRPLKCSWG 389
>gi|262401121|gb|ACY66463.1| TIA-1-like protein [Scylla paramamosain]
Length = 325
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 47/73 (64%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 113
+NTT+F GGL ++T+E L + F +G+I +KI KG F+++ ++E+A +A+ +L+
Sbjct: 195 TNTTVFCGGLKQDITEEMLHKSFQPHGQIEKIKIFKEKGYAFIKYTSKESACQAIVELHN 254
Query: 114 TVIGKQSFRADYG 126
+ + Q R +G
Sbjct: 255 SNLNGQMIRCSWG 267
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 62/138 (44%), Gaps = 33/138 (23%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTT--- 57
+T MN +R MR+ AT GQG +++ +T+
Sbjct: 53 ITMMNDKMLQNRKMRVDWAT-----------------------GQGNKNKYTKVDTSRHH 89
Query: 58 -IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHK 110
++VG L P + ++ LR+ F +GEI+ K+ +G GFV F + +AE ++
Sbjct: 90 HVYVGDLSPEIDEQALREAFQVFGEISDCKVVKDPQSFKSRGYGFVVFVKKMDAETSISA 149
Query: 111 LNGTVIGKQSFRADYGNQ 128
+NG +G++ + + +
Sbjct: 150 MNGQWLGRKMIKTRWATR 167
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 59 FVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEALHKLNGTV 115
+VG LD +VT++ + F Q GE+ S K+ P FV+F + A A+ +N +
Sbjct: 1 YVGNLDNSVTEDLIMMLFGQLGEVRSCKMFREPTTDPYCFVEFCDHMTALNAITMMNDKM 60
Query: 116 IGKQSFRADYG 126
+ + R D+
Sbjct: 61 LQNRKMRVDWA 71
>gi|115477340|ref|NP_001062266.1| Os08g0520300 [Oryza sativa Japonica Group]
gi|42408523|dbj|BAD09702.1| putative oligouridylate binding protein [Oryza sativa Japonica
Group]
gi|42409171|dbj|BAD10437.1| putative oligouridylate binding protein [Oryza sativa Japonica
Group]
gi|113624235|dbj|BAF24180.1| Os08g0520300 [Oryza sativa Japonica Group]
gi|215697677|dbj|BAG91671.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640879|gb|EEE69011.1| hypothetical protein OsJ_27962 [Oryza sativa Japonica Group]
Length = 447
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGA---PG-QGPQSEGDSSN- 55
+TEM G + SR +R AT + Q+ + +NG+ PG + Q G N
Sbjct: 216 ITEMTGKWLGSRQIRCNWATKNNAEEKQETDNHNAVVLTNGSSSNPGMEASQDTGSKENP 275
Query: 56 ------TTIFVGGLDPNVTDEDLRQPFSQYG--EIASVKIPVGKGCGFVQFANRENAEEA 107
TT++VG L V ++L + F G I V++ KG GFV+++N A A
Sbjct: 276 ENNPDCTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQDKGFGFVRYSNHGEAALA 335
Query: 108 LHKLNGTVIGKQSFRADYGNQ 128
+ NG V+ + + +GN+
Sbjct: 336 IQMANGLVVRGKPIKCSWGNK 356
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANR 101
Q E S + IFVG L V D L FS Y + ++ +G GFV F N+
Sbjct: 150 QREDTSGHFHIFVGDLSSEVNDATLYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQ 209
Query: 102 ENAEEALHKLNGTVIGKQSFRADYGNQ 128
+ AE A+ ++ G +G + R ++ +
Sbjct: 210 QEAETAITEMTGKWLGSRQIRCNWATK 236
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 19/123 (15%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC--GFVQFANRENAEEALHK 110
S+ +++VG + PNVT+ L + F G + K+ + GFV + +R +A A+
Sbjct: 70 STCRSVYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSSFGFVDYYDRRSAALAIMT 129
Query: 111 LNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGY-------AIPPPNDPSMYAAAAAAYG 163
L+G I Q+ + ++ AY Q D G+ ND ++Y A +
Sbjct: 130 LHGRHICGQAIKVNW------AYASTQREDTSGHFHIFVGDLSSEVNDATLY----ACFS 179
Query: 164 AYP 166
AYP
Sbjct: 180 AYP 182
>gi|330812809|ref|XP_003291310.1| hypothetical protein DICPUDRAFT_38760 [Dictyostelium purpureum]
gi|325078525|gb|EGC32172.1| hypothetical protein DICPUDRAFT_38760 [Dictyostelium purpureum]
Length = 587
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 41 GAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
P Q E + N +++G + P+VT E L+Q F Q+G + +++I VG+GC FV F
Sbjct: 206 NKPPHHLQEEVPTKN--LWLGNIGPSVTSETLKQLFDQFGNVDNIRILVGRGCAFVNFFT 263
Query: 101 RENAEEALHKLNGTVIGKQSFRADY 125
E+A A + L GT++ + ++
Sbjct: 264 VESAIAARNNLTGTMVCGMPLKINF 288
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIG 117
++ G + P+ +++++R FSQ+G I ++KI K C F+ F + A A + LNGT I
Sbjct: 119 VWAGNVHPDSSEDEIRGLFSQFGYIQAIKIIPAKQCAFITFGDVNAAIAAQYNLNGTPIR 178
Query: 118 KQSFRADYG 126
+ +G
Sbjct: 179 GYPLKLGFG 187
>gi|327299776|ref|XP_003234581.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton rubrum CBS 118892]
gi|326463475|gb|EGD88928.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton rubrum CBS 118892]
Length = 507
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 11/108 (10%)
Query: 27 YQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVK 86
+Q + Y SN A E SS+ IFVG L V DE L Q FS G ++ +
Sbjct: 170 HQSEIRVNWAYQSNTA-----SKEDTSSHFHIFVGDLSNEVNDEVLLQAFSACGSVSEAR 224
Query: 87 IPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
+ +G GFV F R +AE+AL ++G +G ++ R ++ NQ
Sbjct: 225 VMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQ 272
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 15/120 (12%)
Query: 16 IGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQP 75
I A SG ++ GGY AP + + ++VGGLDP VT++ L+Q
Sbjct: 70 IPTAITSPMSGNMMSPTAAGGYVRRSAP--------EPNKRALYVGGLDPRVTEDILKQI 121
Query: 76 FSQYGEIASVKIPVGKGC-------GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
F G + SVKI K GF+++ + AE A+ LNG + + R ++ Q
Sbjct: 122 FETTGHVQSVKIIPDKNFQSKGLNYGFIEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQ 181
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGG------YASNGAPGQGPQS---- 49
++ M+G + SR +R A + + S QQQ + G + + P G QS
Sbjct: 252 LSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMV 311
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T DL F +G + + +G FV+ ENA A
Sbjct: 312 VQQTPQWQTTCYVGNLTPYTTQNDLIPLFQNFGYVVETRFQADRGFAFVKMDTHENAAMA 371
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ +LNG + + + +G
Sbjct: 372 ICQLNGYNVNGRPLKCSWG 390
>gi|378726298|gb|EHY52757.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 481
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E S++ IFVG L V DE L Q FS +G ++ ++ +G GFV F R +
Sbjct: 169 EDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERAD 228
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
AE+AL ++G +G ++ R ++ NQ
Sbjct: 229 AEKALASMDGEWLGSRAIRVNWANQ 253
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 17/105 (16%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG 92
S GG AP + + ++VGGLDP VT++ L+Q F G + SVKI K
Sbjct: 66 SAGGVVRRAAP--------EPNKRALYVGGLDPRVTEDVLKQIFETTGHVVSVKIIPDKN 117
Query: 93 C---------GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV++ + AE A+ LNG + + R ++ Q
Sbjct: 118 AQFSSKGFNYGFVEYDDPGAAERAMTTLNGRRVHQAEIRVNWAYQ 162
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQ-------YSSQGGYASNGAPGQGPQS---- 49
+ M+G + SR +R+ A + QQ S + + P QG QS
Sbjct: 233 LASMDGEWLGSRAIRVNWANQKGQPSISQQQAMAAMGMSPTTPFGHHHFPTQGIQSYEMV 292
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ + TT +VG L P T DL F +G + + +G F++ ENA A
Sbjct: 293 VNQTPAWQTTCYVGNLTPYTTQADLVPLFQNFGYVVETRFQSDRGFAFIKMDTHENAAMA 352
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ +L+G + + + +G
Sbjct: 353 ICQLSGYNVNGRPLKCSWG 371
>gi|343172766|gb|AEL99086.1| RNA recognition motif-containing protein, partial [Silene
latifolia]
Length = 507
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 6/65 (9%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 111
IF+GGLD V +EDL+ F + GE+ V++ +GCGFV+FA ++ A++AL ++
Sbjct: 154 IFIGGLDCEVVEEDLKMAFEKVGEVVEVRLLKDSCTNKNRGCGFVRFATKDQAKKALSEM 213
Query: 112 NGTVI 116
VI
Sbjct: 214 KNPVI 218
>gi|307178104|gb|EFN66931.1| Nucleolysin TIAR [Camponotus floridanus]
Length = 393
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Query: 40 NGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 92
N A G Q + D+SN IFVG L P + + L++ F+ +GEI++ +I KG
Sbjct: 79 NWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKG 138
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSFRADY 125
FV F + AE A++ +NG +G +S R ++
Sbjct: 139 YAFVSFVKKSEAEAAINAMNGQWLGSRSIRTNW 171
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 61/129 (47%), Gaps = 5/129 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG-QGPQSEGDSSNTTIF 59
+ MNG + SR +R +T S + +++N P + ++ +N T++
Sbjct: 154 INAMNGQWLGSRSIRTNWST----RKPPPPRSERPRHSNNSKPNYEEVYNQSSPTNCTVY 209
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQ 119
GG +TDE +++ FS +G I +++ KG F++F +E A A+ + T I
Sbjct: 210 CGGFTNGITDELIKKTFSPFGTIQDIRVFKDKGYAFIKFTTKEAATHAIESTHNTEINGS 269
Query: 120 SFRADYGNQ 128
+ +G +
Sbjct: 270 IVKCFWGKE 278
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 108
+S+ T++VG LD +V+++ L FSQ G + KI P FV+F N ++A AL
Sbjct: 4 ESNPRTLYVGNLDASVSEDLLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQSAATAL 63
Query: 109 HKLNGTVIGKQSFRADY----GNQ 128
+N + + ++ GNQ
Sbjct: 64 AAMNKRSFLDKEMKVNWATSPGNQ 87
>gi|358340385|dbj|GAA34086.2| pre-mRNA-splicing factor RBM22/SLT11 [Clonorchis sinensis]
Length = 534
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT+++G + VT+ DLR F Q+GEI SV + + C F+QF R++AE+A +
Sbjct: 244 DRTITTLYIGSIPDEVTERDLRNHFYQFGEIRSVNLHPRQHCAFIQFTTRQSAEKAAERS 303
Query: 111 LNGTVIGKQSFRADYGN 127
++G ++G
Sbjct: 304 YERLILGGHRLTVNWGK 320
>gi|26390405|dbj|BAC25892.1| unnamed protein product [Mus musculus]
Length = 358
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S S+ +N T++
Sbjct: 136 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VSQSSPNNCTVYC 190
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F++ E+A A+ +NGT I
Sbjct: 191 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHV 250
Query: 121 FRADYGNQ 128
+ +G +
Sbjct: 251 VKCYWGKE 258
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG
Sbjct: 62 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGY 121
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV F N+ +AE A+ ++ G +G + R ++ +
Sbjct: 122 GFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATR 156
>gi|295669832|ref|XP_002795464.1| TIA1 cytotoxic granule-associated RNA binding protein
[Paracoccidioides sp. 'lutzii' Pb01]
gi|226285398|gb|EEH40964.1| TIA1 cytotoxic granule-associated RNA binding protein
[Paracoccidioides sp. 'lutzii' Pb01]
Length = 501
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E S++ IFVG L V DE L Q FS +G ++ ++ +G GFV F R +
Sbjct: 152 EDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSD 211
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
AE+AL ++G +G ++ R ++ NQ
Sbjct: 212 AEKALSSMDGEWLGSRAIRCNWANQ 236
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 46/106 (43%), Gaps = 14/106 (13%)
Query: 16 IGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQP 75
I A SG +S GG+ AP + + ++VGGLDP VT++ LRQ
Sbjct: 68 IPTAITSPMSGNMMSPTSAGGFVRRAAP--------EPNKRALYVGGLDPRVTEDILRQI 119
Query: 76 FSQYGEIASVKIPVGKGCGFVQFA------NRENAEEALHKLNGTV 115
F G + SVKI K V +A N+E+ H G +
Sbjct: 120 FETTGHVQSVKIIPDKNEIRVNWAYQSNSNNKEDTSNHFHIFVGDL 165
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGG------YASNGAPGQGPQS---- 49
++ M+G + SR +R A + + S QQQ + G + + P G QS
Sbjct: 216 LSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMV 275
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T DL F +G + + +G FV+ ENA A
Sbjct: 276 VAQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVETRFQADRGFAFVKMDTHENAAMA 335
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ +L+G + + + +G
Sbjct: 336 ICQLSGYNVNGRPLKCSWG 354
>gi|225682885|gb|EEH21169.1| nucleolysin TIA-1 [Paracoccidioides brasiliensis Pb03]
Length = 471
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E S++ IFVG L V DE L Q FS +G ++ ++ +G GFV F R +
Sbjct: 184 EDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSD 243
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
AE+AL ++G +G ++ R ++ NQ
Sbjct: 244 AEKALSSMDGEWLGSRAIRCNWANQ 268
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 13/118 (11%)
Query: 16 IGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQP 75
I A SG +S GG+ AP + + ++VGGLDP VT++ LRQ
Sbjct: 68 IPTAITSPMSGNMMSPTSAGGFVRRAAP--------EPNKRALYVGGLDPRVTEDILRQI 119
Query: 76 FSQYGEIASVKIPVGKGC-----GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
F G + SVKI K GFV++ + AE A+ LNG + + R ++ Q
Sbjct: 120 FETTGHVQSVKIIPDKNSKGLNYGFVEYDDPGAAERAMATLNGRRVHQSEIRVNWAYQ 177
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGG------YASNGAPGQGPQS---- 49
++ M+G + SR +R A + + S QQQ + G + + P G QS
Sbjct: 248 LSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMV 307
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T DL F +G + + +G FV+ ENA A
Sbjct: 308 VAQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVETRFQADRGFAFVKMDTHENAAMA 367
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ +L+G + + + +G
Sbjct: 368 ICQLSGYNVNGRPLKCSWG 386
>gi|342874810|gb|EGU76729.1| hypothetical protein FOXB_12750 [Fusarium oxysporum Fo5176]
Length = 786
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIG 117
+++G LD T+E LRQ FS+YGEI V K C FV F N NA +A+ + G
Sbjct: 512 VYIGNLDETWTEERLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAIRGRD-D 570
Query: 118 KQSFRADYGNQWSG----AYYGGQVYDGYGYAIPPPN 150
+ F+ ++G G Q G G + PPPN
Sbjct: 571 YRKFKVNFGKDRCGNPPRQMQQSQSPRGDGVSSPPPN 607
>gi|325089595|gb|EGC42905.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Ajellomyces capsulatus H88]
Length = 492
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E S++ IFVG L V DE L Q FS +G ++ ++ +G GFV F R +
Sbjct: 176 EDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERPD 235
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
AE+AL ++G +G ++ R ++ NQ
Sbjct: 236 AEKALSSMDGEWLGSRAIRCNWANQ 260
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 13/118 (11%)
Query: 16 IGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQP 75
I A +G SS GG+ AP + + +++GGLD VT++ LRQ
Sbjct: 60 IPTAITSPMTGNMMSPSSTGGFVRRAAP--------EPNKRALYIGGLDARVTEDILRQI 111
Query: 76 FSQYGEIASVKIPVGKGC-----GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
F G + SVKI K GFV++ + AE A+ LNG + + R ++ Q
Sbjct: 112 FETTGHVQSVKIIPDKNSKGLNYGFVEYDDPGAAERAMSTLNGRRVHQSEIRVNWAYQ 169
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGG------YASNGAPGQGPQS---- 49
++ M+G + SR +R A + + S QQQ + G + + P G QS
Sbjct: 240 LSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPSTPFGHHHFPTHGVQSYDMV 299
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T DL F +G + + +G FV+ ENA A
Sbjct: 300 AAQTPQWQTTCYVGNLTPYTTQNDLIPLFQNFGYVVETRFQTDRGFAFVKMDTHENAAMA 359
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ +L+G + + + +G
Sbjct: 360 ICQLSGYNVNGRPLKCSWG 378
>gi|327357360|gb|EGE86217.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Ajellomyces dermatitidis ATCC 18188]
Length = 492
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E S++ IFVG L V DE L Q FS +G ++ ++ +G GFV F R +
Sbjct: 176 EDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERPD 235
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
AE+AL ++G +G ++ R ++ NQ
Sbjct: 236 AEKALSSMDGEWLGSRAIRCNWANQ 260
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 13/118 (11%)
Query: 16 IGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQP 75
I A SG +S GG+ AP + + +++GGLD VT++ LRQ
Sbjct: 60 IPTAITSPMSGNMMSPTSTGGFVRRAAP--------EPNKRALYIGGLDARVTEDILRQI 111
Query: 76 FSQYGEIASVKIPVGKGC-----GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
F G + SVKI K GFV++ + AE A+ LNG + + R ++ Q
Sbjct: 112 FETTGHVQSVKIIPDKNSKGLNYGFVEYDDPGAAERAMATLNGRRVHQSEIRVNWAYQ 169
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGG------YASNGAPGQGPQS---- 49
++ M+G + SR +R A + + S QQQ + G + + P G QS
Sbjct: 240 LSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMV 299
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T DL F +G + + +G FV+ ENA A
Sbjct: 300 AAQTPQWQTTCYVGNLTPYTTQNDLIPLFQNFGYVVETRFQADRGFAFVKMDTHENAAMA 359
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ +L+G + + + +G
Sbjct: 360 ICQLSGYNVNGRPLKCSWG 378
>gi|389639074|ref|XP_003717170.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Magnaporthe oryzae 70-15]
gi|351642989|gb|EHA50851.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Magnaporthe oryzae 70-15]
gi|440475727|gb|ELQ44390.1| nucleolysin TIA-1 [Magnaporthe oryzae Y34]
gi|440486439|gb|ELQ66302.1| nucleolysin TIA-1 [Magnaporthe oryzae P131]
Length = 479
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E S++ IFVG L V DE L Q FS +G ++ ++ +G GFV F +R +
Sbjct: 170 EDTSNHFHIFVGDLSNEVNDEVLTQAFSVFGSVSEARVMWDMKTGRSRGYGFVAFRDRSD 229
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
AE+AL ++G +G ++ R ++ NQ
Sbjct: 230 AEKALSSMDGEWLGSRAIRCNWANQ 254
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC-----GFVQFANRENAEEALHKLN 112
++VGGLD VT++ LRQ F G + +VKI K GFV++ + A+ A+ LN
Sbjct: 87 LYVGGLDARVTEDVLRQIFETTGHVQNVKIIPDKNAKGYNYGFVEYDDPGAADRAMQTLN 146
Query: 113 GTVIGKQSFRADYGNQ 128
G + + R ++ Q
Sbjct: 147 GRRVHQSEIRVNWAYQ 162
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGG------YASNGAPGQGPQS---- 49
++ M+G + SR +R A + + S QQQ S G + + P G QS
Sbjct: 234 LSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMSAVGMTPTTPFGHHHFPTHGMQSYEMV 293
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ + TT +VG L P T D+ F +G + + +G F++ + ENA +A
Sbjct: 294 VNQTPAYQTTCYVGNLTPYTTANDVVPLFQNFGYVVESRFQADRGFAFIKMDSHENAAQA 353
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ LNG + + + +G
Sbjct: 354 ICGLNGYNVNGRPLKCSWG 372
>gi|356502130|ref|XP_003519874.1| PREDICTED: uncharacterized protein LOC100784338 [Glycine max]
Length = 884
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%), Gaps = 6/65 (9%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 111
IFVGGLD + T+EDLR+ F + GEI V++ KG FV+F+++E+A++AL ++
Sbjct: 391 IFVGGLDRDATEEDLRKVFQRIGEIVEVRLHKNSSTNKNKGYAFVKFSDKEHAKKALSEM 450
Query: 112 NGTVI 116
VI
Sbjct: 451 KNPVI 455
Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFV 96
P + P E + ++F+ GL P+ ++ +R+ F YGE+ + + K GFV
Sbjct: 554 PIREPDPEIMAQVKSVFINGLPPHWDEDHVRELFKSYGEVVRIVLARNMSSAKRKDYGFV 613
Query: 97 QFANRENAEEALHKLNGTVIG 117
F+ E A + +N + +G
Sbjct: 614 DFSTHEAAVACVDGVNKSELG 634
>gi|326480772|gb|EGE04782.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton equinum CBS 127.97]
Length = 507
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 11/108 (10%)
Query: 27 YQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVK 86
+Q + Y SN A E SS+ IFVG L V DE L Q FS G ++ +
Sbjct: 170 HQSEIRVNWAYQSNTA-----SKEDTSSHFHIFVGDLSNEVNDEVLLQAFSACGSVSEAR 224
Query: 87 IPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
+ +G GFV F R +AE+AL ++G +G ++ R ++ NQ
Sbjct: 225 VMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQ 272
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 15/120 (12%)
Query: 16 IGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQP 75
I A SG ++ GGY AP + + ++VGGLDP VT++ L+Q
Sbjct: 70 IPTAITSPMSGNMMSPTAAGGYVRRSAP--------EPNKRALYVGGLDPRVTEDILKQI 121
Query: 76 FSQYGEIASVKIPVGKGC-------GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
F G + SVKI K GF+++ + AE A+ LNG + + R ++ Q
Sbjct: 122 FETTGHVQSVKIIPDKNFQSKGLNYGFIEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQ 181
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGG------YASNGAPGQGPQS---- 49
++ M+G + SR +R A + + S QQQ + G + + P G QS
Sbjct: 252 LSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMV 311
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T DL F +G + + +G FV+ ENA A
Sbjct: 312 VQQTPQWQTTCYVGNLTPYTTQNDLIPLFQNFGYVVETRFQADRGFAFVKMDTHENAAMA 371
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ +LNG + + + +G
Sbjct: 372 ICQLNGYNVNGRPLKCSWG 390
>gi|50725435|dbj|BAD32907.1| putative polyadenylate-binding protein [Oryza sativa Japonica
Group]
Length = 670
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 5/67 (7%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEALHKLN 112
+++ LD ++ DE LR+ F +GE+AS K+ + KGCGFV FA E+A A+ K+N
Sbjct: 345 LYLKNLDDDINDEHLRKLFECFGEVASCKVMLDSHGRSKGCGFVSFATVEDANNAILKMN 404
Query: 113 GTVIGKQ 119
G ++GK+
Sbjct: 405 GKMVGKK 411
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEA 107
S +F+ L+PN+ ++ L + FS +G I S K+ KG GF+QF + +A++A
Sbjct: 146 SGLANVFIKNLEPNIDNKSLYEMFSSFGTILSSKVATDFNGKSKGYGFIQFESESSAKDA 205
Query: 108 LHKLNGTVIGKQ 119
++ LNG + Q
Sbjct: 206 INGLNGMLANGQ 217
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASV----KIPVGK---GCGFVQFANRENAEEALH 109
+++VG L+ +V ++ L FSQ +AS I G+ G G+V F +RE+A A+
Sbjct: 61 SLYVGDLEASVGEDQLVALFSQVAPVASAYVCRDIAGGRKSLGYGYVNFMSREDATRAME 120
Query: 110 KLNGTVIGKQSFRADYGNQ 128
LN TV+ + R + N+
Sbjct: 121 NLNFTVVNGKPIRVMFSNR 139
Score = 41.2 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 45 QGPQSEGDSSN-TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGKGCGFVQF 98
Q + GD++N T ++V L + +D DL FS +G I S + + + GFV F
Sbjct: 228 QEREHTGDANNFTNVYVKNLPKHFSDNDLLNEFSSFGAITSAIVMRDANGLSRCFGFVNF 287
Query: 99 ANRENAEEALHKLNGTVIG 117
E A A+ LNG IG
Sbjct: 288 EKSECARNAVKNLNGKSIG 306
>gi|343172764|gb|AEL99085.1| RNA recognition motif-containing protein, partial [Silene
latifolia]
Length = 507
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 6/65 (9%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 111
IF+GGLD V +EDL+ F + GE+ V++ +GCGFV+FA ++ A++AL ++
Sbjct: 154 IFIGGLDCEVVEEDLKMAFEKVGEVVEVRLLKDSCTNKNRGCGFVRFATKDQAKKALSEM 213
Query: 112 NGTVI 116
VI
Sbjct: 214 KNPVI 218
>gi|449438721|ref|XP_004137136.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Cucumis
sativus]
gi|449476391|ref|XP_004154724.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Cucumis
sativus]
Length = 251
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 12/107 (11%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG----CGF--VQFANRENAEEA 107
++TT++VG + T+E + + FS+ GEI + + + K CGF V + +RE+ E+A
Sbjct: 32 TSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDA 91
Query: 108 LHKLNGTVIGKQSFRADY------GNQWSGAYYGGQVYDGYGYAIPP 148
+ ++GT++ + R D+ G QW GGQV D Y P
Sbjct: 92 VKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP 138
>gi|348566571|ref|XP_003469075.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Cavia porcellus]
Length = 388
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S S+ SN T++
Sbjct: 164 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VSQSSPSNCTVYC 218
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NGT I
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHV 278
Query: 121 FRADYGNQ 128
+ +G +
Sbjct: 279 VKCYWGKE 286
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 111
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 112 NGTVIGKQSFRADYGNQ 128
G +G + R ++ +
Sbjct: 168 GGQWLGGRQIRTNWATR 184
>gi|328715702|ref|XP_003245699.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 2
[Acyrthosiphon pisum]
gi|328715706|ref|XP_003245700.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 3
[Acyrthosiphon pisum]
Length = 420
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 63/127 (49%), Gaps = 11/127 (8%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSS--NTTIFVG 61
MNG + SR +R AT RK + SN P + SS N T++ G
Sbjct: 123 MNGQWLGSRSIRTNWAT-RKPPTLKTD--------SNTKPLTFDEVYNQSSPTNCTVYCG 173
Query: 62 GLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSF 121
GL +TDE +++ F+ +G I +++ KG FV+FA +E+A A+ ++ + I Q
Sbjct: 174 GLTSGLTDELVQKTFAPFGNIQEIRVFKDKGYAFVRFATKESATHAIVAVHNSDINGQPV 233
Query: 122 RADYGNQ 128
+ +G +
Sbjct: 234 KCSWGKE 240
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAE 105
S + IFVG L P + + LR+ F+ +GEI+ ++ KG GFV F + AE
Sbjct: 58 KSEHHHIFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTLKSKGYGFVSFLKKAEAE 117
Query: 106 EALHKLNGTVIGKQSFRADYGNQ 128
A+ +NG +G +S R ++ +
Sbjct: 118 SAIAAMNGQWLGSRSIRTNWATR 140
>gi|302409198|ref|XP_003002433.1| nucleolysin TIA-1 [Verticillium albo-atrum VaMs.102]
gi|261358466|gb|EEY20894.1| nucleolysin TIA-1 [Verticillium albo-atrum VaMs.102]
Length = 443
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 49 SEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANR 101
S+ D+SN IFVG L V DE L Q F+ +G ++ ++ +G GFV F +R
Sbjct: 132 SKEDTSNHFHIFVGDLSNEVNDEILSQAFAAFGSVSEARVMWDMKTGRSRGYGFVAFRDR 191
Query: 102 ENAEEALHKLNGTVIGKQSFRADYGNQ 128
+AE+AL ++G +G ++ R ++ NQ
Sbjct: 192 PDAEKALSSMDGEWLGSRAIRCNWANQ 218
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 73/184 (39%), Gaps = 15/184 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG-------YASNGAPGQGPQS---- 49
++ M+G + SR +R A + QQ + Q + + P G S
Sbjct: 198 LSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQAMGMTPTTPFGHHQFPAHGMASYEVI 257
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ + TT++VG L P T D+ F +G + + +G F++ + E A A
Sbjct: 258 LAQTPNWQTTVYVGNLTPYTTPNDVVPLFQNFGFVVESRFQADRGFAFIKMESHEAAAMA 317
Query: 108 LHKLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 167
+ ++NG + + + +G + GG GY+ P Y AY +P
Sbjct: 318 ICQMNGYNVNGRPLKCSWGKDKTPNAAGGFDPAQQGYSPQSATAPGAYPGTPTAY--FPQ 375
Query: 168 YGSH 171
YG+
Sbjct: 376 YGAQ 379
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 16 IGAATPRKSSGYQQQYS--SQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLR 73
I A SG Q S S GG+ AP + + +++GGLD VT++ LR
Sbjct: 18 IPTAITSPLSGVDQALSPGSAGGFGRRAAP--------EPNKRALYIGGLDQRVTEDVLR 69
Query: 74 QPFSQYGEIASVKIPVGK-----GCGFVQFANRENAEEALHKLNGTVI 116
Q F G + +VKI K GFV++ + A A+ LNG +
Sbjct: 70 QIFETTGHVQNVKIIPDKNQKGYNYGFVEYDDPGAAARAMQTLNGRRV 117
>gi|222635819|gb|EEE65951.1| hypothetical protein OsJ_21832 [Oryza sativa Japonica Group]
Length = 710
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 5/67 (7%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEALHKLN 112
+++ LD ++ DE LR+ F +GE+AS K+ + KGCGFV FA E+A A+ K+N
Sbjct: 369 LYLKNLDDDINDEHLRKLFECFGEVASCKVMLDSHGRSKGCGFVSFATVEDANNAILKMN 428
Query: 113 GTVIGKQ 119
G ++GK+
Sbjct: 429 GKMVGKK 435
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEA 107
S +F+ L+PN+ ++ L + FS +G I S K+ KG GF+QF + +A++A
Sbjct: 170 SGLANVFIKNLEPNIDNKSLYEMFSSFGTILSSKVATDFNGKSKGYGFIQFESESSAKDA 229
Query: 108 LHKLNGTVIGKQ 119
++ LNG + Q
Sbjct: 230 INGLNGMLANGQ 241
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASV----KIPVGK---GCGFVQFANRENAEEALH 109
+++VG L+ +V ++ L FSQ +AS I G+ G G+V F +RE+A A+
Sbjct: 85 SLYVGDLEASVGEDQLVALFSQVAPVASAYVCRDIAGGRKSLGYGYVNFMSREDATRAME 144
Query: 110 KLNGTVIGKQSFRADYGNQ 128
LN TV+ + R + N+
Sbjct: 145 NLNFTVVNGKPIRVMFSNR 163
Score = 41.2 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 45 QGPQSEGDSSN-TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGKGCGFVQF 98
Q + GD++N T ++V L + +D DL FS +G I S + + + GFV F
Sbjct: 252 QEREHTGDANNFTNVYVKNLPKHFSDNDLLNEFSSFGAITSAIVMRDANGLSRCFGFVNF 311
Query: 99 ANRENAEEALHKLNGTVIG 117
E A A+ LNG IG
Sbjct: 312 EKSECARNAVKNLNGKSIG 330
>gi|125555900|gb|EAZ01506.1| hypothetical protein OsI_23538 [Oryza sativa Indica Group]
Length = 669
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 5/67 (7%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEALHKLN 112
+++ LD ++ DE LR+ F +GE+AS K+ + KGCGFV FA E+A A+ K+N
Sbjct: 346 LYLKNLDDDINDEHLRKLFECFGEVASCKVMLDSHGRSKGCGFVSFATVEDANNAILKMN 405
Query: 113 GTVIGKQ 119
G ++GK+
Sbjct: 406 GKMVGKK 412
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEA 107
S +F+ L+PN+ ++ L + FS +G I S K+ KG GF+QF + +A++A
Sbjct: 147 SGLANVFIKNLEPNIDNKSLYEMFSSFGTILSSKVATDFNGKSKGYGFIQFESESSAKDA 206
Query: 108 LHKLNGTVIGKQ 119
++ LNG + Q
Sbjct: 207 INGLNGMLANGQ 218
Score = 41.2 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 45 QGPQSEGDSSN-TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGKGCGFVQF 98
Q + GD++N T ++V L + +D DL FS +G I S + + + GFV F
Sbjct: 229 QEREHTGDANNFTNVYVKNLPKHFSDNDLLNEFSSFGAITSAIVMRDANGLSRCFGFVNF 288
Query: 99 ANRENAEEALHKLNGTVIG 117
E A A+ LNG IG
Sbjct: 289 EKSECARNAVKNLNGKSIG 307
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-------PVGKGCGFVQFANRENAEEALH 109
+++VG L+ +V ++ L FSQ +AS + G G+V F +RE+A A+
Sbjct: 62 SLYVGDLEASVGEDQLVALFSQVAPVASAYVCRDIAGGSKSLGYGYVNFMSREDATRAME 121
Query: 110 KLNGTVIGKQSFRADYGNQ 128
LN TV+ + R + N+
Sbjct: 122 NLNFTVVNGKPIRVMFSNR 140
>gi|255760009|ref|NP_001157550.1| nucleolysin TIA-1 isoform 2 [Mus musculus]
gi|28386187|gb|AAH46812.1| Tia1 protein [Mus musculus]
Length = 377
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S S+ +N T++
Sbjct: 155 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VSQSSPNNCTVYC 209
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F++ E+A A+ +NGT I
Sbjct: 210 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHV 269
Query: 121 FRADYGNQ 128
+ +G +
Sbjct: 270 VKCYWGKE 277
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG
Sbjct: 81 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGY 140
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV F N+ +AE A+ ++ G +G + R ++ +
Sbjct: 141 GFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATR 175
>gi|322693766|gb|EFY85615.1| TIA1 cytotoxic granule-associated RNA binding protein [Metarhizium
acridum CQMa 102]
Length = 444
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANREN 103
E SS+ IFVG L V D+ L Q FS +G ++ ++ +G GFV F +R +
Sbjct: 136 EDTSSHFHIFVGDLSNEVNDDILLQAFSAFGTVSEARVMWDMKTGRTRGYGFVAFRDRSD 195
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
AE+AL ++G +G ++ R ++ NQ
Sbjct: 196 AEKALSSMDGEWLGSRAIRCNWANQ 220
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 57/139 (41%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG-------YASNGAPGQGPQS---- 49
++ M+G + SR +R A + QQ + Q + + P G S
Sbjct: 200 LSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQAMGLTPTTPFGHHQFPAHGVGSYDVV 259
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ + TT +VG L P T D+ F +G + + +G F++ ENA A
Sbjct: 260 LNQTPNWQTTCYVGNLTPYTTPNDVVPLFQNFGFVVESRFQADRGFAFIKMDTHENAAMA 319
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ ++NG + + + +G
Sbjct: 320 ICQMNGYNVNGRPLKCSWG 338
Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA------NRENAEEALHKL 111
++VGGL+ VT++ LRQ F G + +VKI K V +A N+E+ H
Sbjct: 86 LYVGGLEQRVTEDVLRQIFETTGHVQNVKIIPDKNEIRVNWAYQSNTSNKEDTSSHFHIF 145
Query: 112 NGTV 115
G +
Sbjct: 146 VGDL 149
>gi|346972032|gb|EGY15484.1| nucleolysin TIA-1 [Verticillium dahliae VdLs.17]
Length = 489
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 49 SEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANR 101
S+ D+SN IFVG L V DE L Q F+ +G ++ ++ +G GFV F +R
Sbjct: 178 SKEDTSNHFHIFVGDLSNEVNDEILSQAFAAFGSVSEARVMWDMKTGRSRGYGFVAFRDR 237
Query: 102 ENAEEALHKLNGTVIGKQSFRADYGNQ 128
+AE+AL ++G +G ++ R ++ NQ
Sbjct: 238 PDAEKALSSMDGEWLGSRAIRCNWANQ 264
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 73/184 (39%), Gaps = 15/184 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQG-------GYASNGAPGQGPQS---- 49
++ M+G + SR +R A + QQ + Q + + P G S
Sbjct: 244 LSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQAMGMTPTTPFGHHQFPAHGMASYEVI 303
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ + TT++VG L P T D+ F +G + + +G F++ + E A A
Sbjct: 304 LAQTPNWQTTVYVGNLTPYTTPNDVVPLFQNFGFVVESRFQADRGFAFIKMESHEAAAMA 363
Query: 108 LHKLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 167
+ ++NG + + + +G + GG GY+ P Y AY +P
Sbjct: 364 ICQMNGYNVNGRPLKCSWGKDKTPNAAGGFDPAQQGYSPQSATAPGAYPGTPTAY--FPQ 421
Query: 168 YGSH 171
YG+
Sbjct: 422 YGAQ 425
>gi|225713880|gb|ACO12786.1| Nucleolysin TIAR [Lepeophtheirus salmonis]
Length = 352
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 19/129 (14%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGL 63
MN C + M++ A SS GG + + P+ + S + IFVG L
Sbjct: 69 MNKRICLGKEMKVNWA------------SSPGGSSDSVVHHNLPKPDT-SQHHHIFVGDL 115
Query: 64 DPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKLNGTVIG 117
P++T E L+ F +GEI+ K+ KG GFV F + +A+ A+ ++NG +G
Sbjct: 116 SPDITTETLKNVFVPFGEISDYKVVKDMLTNKSKGYGFVSFVEKNDAQTAIEQMNGQWLG 175
Query: 118 KQSFRADYG 126
++ R ++
Sbjct: 176 SRAIRTNWA 184
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + SR +R A + + Y + S+ N + + N T++
Sbjct: 166 IEQMNGQWLGSRAIRTNWAARKPPAPYSKDTSN-----VNKLNFEDVYRQASPRNFTVYC 220
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGL N + +RQ FS +G I ++ KG FV+F N+E+A A+ L+G+ + QS
Sbjct: 221 GGL-INSDENIIRQTFSPFGRILEIRYFRDKGYAFVRFDNKESACNAIVALHGSNVQGQS 279
Query: 121 FRADYGNQ 128
+ +G +
Sbjct: 280 VKCSWGKE 287
>gi|342870153|gb|EGU73450.1| hypothetical protein FOXB_16088 [Fusarium oxysporum Fo5176]
Length = 474
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E S++ IFVG L V DE L Q FS +G ++ ++ +G GFV F +R
Sbjct: 168 EDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPE 227
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
AE+AL ++G +G ++ R ++ NQ
Sbjct: 228 AEKALSSMDGEWLGSRAIRCNWANQ 252
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 12/124 (9%)
Query: 10 SSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTD 69
++ P+ +PR ++ QGG S + G ++ + + +++GGLD VT+
Sbjct: 45 NTNPIPTAITSPRSAA-------DQGGIMSPTSAGGFRRAAPEPNKRALYIGGLDQRVTE 97
Query: 70 EDLRQPFSQYGEIASVKIPVGKGC-----GFVQFANRENAEEALHKLNGTVIGKQSFRAD 124
E LRQ F G + +VKI K GFV++ + AE A+ LNG + + R +
Sbjct: 98 EVLRQIFETTGHVQNVKIIPDKNARGYNYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVN 157
Query: 125 YGNQ 128
+ Q
Sbjct: 158 WAYQ 161
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 5/123 (4%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
++ S TT++VG L P T D+ F +G + + +G F++ ENA A+
Sbjct: 293 TQTPSWQTTVYVGNLTPYTTPNDVVPLFQNFGFVVESRFQADRGFAFIKMDTHENAAMAI 352
Query: 109 HKLNGTVIGKQSFRADYGNQWS----GAYYGGQVYDGYGYAIPP-PNDPSMYAAAAAAYG 163
++NG + + + +G + GA+ Q Y P P P+ Y A YG
Sbjct: 353 CQMNGYNVNGRPLKCSWGKDKTPSAQGAFDPAQPYSPQSAQAPGFPGTPTYYPQYGAQYG 412
Query: 164 AYP 166
P
Sbjct: 413 GQP 415
>gi|226897447|gb|ACO90183.1| nuclear cap-binding protein 20 [Nicotiana tabacum]
Length = 171
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 12/99 (12%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG------FVQFANRENAEEALH 109
TT++VG + T+E + + FS+ GEI + + + K C FV F +R++ E+++
Sbjct: 34 TTVYVGNMSFYTTEEQVYELFSRAGEIKKIVMGLDKNCKTPCGFCFVMFYSRDDTEDSVK 93
Query: 110 KLNGTVIGKQSFRADY------GNQWSGAYYGGQVYDGY 142
++GT++ + R D+ G QW GGQV D Y
Sbjct: 94 YISGTILDDRPIRVDFDWGFQEGRQWGRGRSGGQVRDEY 132
>gi|425768240|gb|EKV06770.1| Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Penicillium digitatum Pd1]
gi|425770410|gb|EKV08883.1| Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Penicillium digitatum PHI26]
Length = 482
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 17/106 (16%)
Query: 32 SSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---- 87
+S GGY AP + + ++VGGLDP VT++ L+Q F G + SVKI
Sbjct: 75 TSAGGYVRRAAP--------EPNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDK 126
Query: 88 -----PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
G GFV+F + AE A+ LNG I + R ++ Q
Sbjct: 127 NGQFTTKGHNYGFVEFDDPGAAERAMQTLNGRRIHQSEIRVNWAYQ 172
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 49 SEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANR 101
S+ D+SN IFVG L V DE L Q FS +G ++ ++ +G GFV F +R
Sbjct: 177 SKEDTSNHFHIFVGDLSNEVNDEVLTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDR 236
Query: 102 ENAEEALHKLNGTVIGKQSFRADYGNQ 128
A++AL+ ++G +G ++ R ++ NQ
Sbjct: 237 TEADKALNSMDGEWLGSRAIRCNWANQ 263
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 57/139 (41%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQ-------YSSQGGYASNGAPGQGPQS---- 49
+ M+G + SR +R A + QQ + + + P G QS
Sbjct: 243 LNSMDGEWLGSRAIRCNWANQKGQPSISQQQALVAMGMTPTTAFGHHHFPTHGIQSYDMV 302
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T DL F +G + ++ +G FV+ + ENA A
Sbjct: 303 AQQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVLETRLQADRGFAFVKMDSHENAASA 362
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ +LNG + + + +G
Sbjct: 363 ICQLNGYNVNGRPLKCSWG 381
>gi|332029721|gb|EGI69600.1| Nucleolysin TIAR [Acromyrmex echinatior]
Length = 393
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Query: 40 NGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 92
N A G Q + D+SN IFVG L P + + L++ F+ +GEI++ +I KG
Sbjct: 79 NWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKG 138
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSFRADY 125
FV F + AE A++ +NG +G +S R ++
Sbjct: 139 YAFVSFVKKSEAEAAINAMNGQWLGSRSIRTNW 171
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 61/126 (48%), Gaps = 5/126 (3%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG-QGPQSEGDSSNTTIFVGG 62
MNG + SR +R +T + S + +++N P + ++ +N T++ GG
Sbjct: 157 MNGQWLGSRSIRTNWSTRKPPP----PRSERPRHSNNSKPNYEEVYNQSSPTNCTVYCGG 212
Query: 63 LDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
+TDE +++ FS +G I +++ KG F++F +E A A+ + T I +
Sbjct: 213 FTNGITDELIKKTFSPFGTIQDIRVFKDKGYAFIKFTTKEAATHAIESTHNTEINGSIVK 272
Query: 123 ADYGNQ 128
+G +
Sbjct: 273 CFWGKE 278
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 108
+S+ T++VG LD +V+++ L FSQ G + KI P FV+F N + A AL
Sbjct: 4 ESNPRTLYVGNLDTSVSEDLLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQCAATAL 63
Query: 109 HKLNGTVIGKQSFRADY----GNQ 128
+N + + ++ GNQ
Sbjct: 64 AAMNKRSFLDKEMKVNWATSPGNQ 87
>gi|322709421|gb|EFZ00997.1| oligouridylate binding protein ,putative [Metarhizium anisopliae
ARSEF 23]
Length = 472
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANREN 103
E SS+ IFVG L V D+ L Q FS +G ++ ++ +G GFV F +R +
Sbjct: 164 EDTSSHFHIFVGDLSNEVNDDILLQAFSAFGTVSEARVMWDMKTGRTRGYGFVAFRDRSD 223
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
AE+AL ++G +G ++ R ++ NQ
Sbjct: 224 AEKALSSMDGEWLGSRAIRCNWANQ 248
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 58/139 (41%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG-------YASNGAPGQGPQS---- 49
++ M+G + SR +R A + QQ + Q + + P G S
Sbjct: 228 LSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQAMGLTPTTPFGHHQFPAHGVGSYDVV 287
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ + TT +VG L P T D+ F +G + + +G F++ + ENA A
Sbjct: 288 LNQTPNWQTTCYVGNLTPYTTPNDVVPLFQNFGFVVESRFQADRGFAFIKMDSHENAAMA 347
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ ++NG + + + +G
Sbjct: 348 ICQMNGYNVNGRPLKCSWG 366
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 9/76 (11%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC-----GFVQFANRENAEEALHKLN 112
++VGGL+ VT++ LRQ F G + +VKI K GFV++ + AE A+ LN
Sbjct: 86 LYVGGLEQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGFNYGFVEYDDPGAAERAMSTLN 145
Query: 113 GTVIGKQSFRADYGNQ 128
G++ R ++ Q
Sbjct: 146 ----GRREIRVNWAYQ 157
>gi|328792887|ref|XP_624017.2| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 1 [Apis
mellifera]
Length = 367
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 65/127 (51%), Gaps = 11/127 (8%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSS--NTTIFVG 61
MNG + SR +R AT RK + + +N P + SS N T++ G
Sbjct: 116 MNGQWLGSRSIRTNWAT-RKPPAPKSE--------ANAKPLTFDEVYNQSSPTNCTVYCG 166
Query: 62 GLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSF 121
GL +T+E +++ FS +G I +++ KG F++F+ +E+A A+ ++ T I Q+
Sbjct: 167 GLTNGLTEELMQKTFSPFGSIQEIRVFKDKGYAFIRFSTKESATHAIVAVHNTDINGQTV 226
Query: 122 RADYGNQ 128
+ +G +
Sbjct: 227 KCSWGKE 233
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 111
IFVG L P + + LR+ F+ +GEI+ ++ KG GFV F + AE A+ +
Sbjct: 57 IFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTLKSKGYGFVSFVKKAEAESAIGAM 116
Query: 112 NGTVIGKQSFRADYGNQ 128
NG +G +S R ++ +
Sbjct: 117 NGQWLGSRSIRTNWATR 133
>gi|148666756|gb|EDK99172.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_f
[Mus musculus]
Length = 375
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S S+ +N T++
Sbjct: 153 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VSQSSPNNCTVYC 207
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F++ E+A A+ +NGT I
Sbjct: 208 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHV 267
Query: 121 FRADYGNQ 128
+ +G +
Sbjct: 268 VKCYWGKE 275
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG
Sbjct: 79 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGY 138
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV F N+ +AE A+ ++ G +G + R ++ +
Sbjct: 139 GFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATR 173
>gi|328876996|gb|EGG25359.1| hypothetical protein DFA_03608 [Dictyostelium fasciculatum]
Length = 1145
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 6/74 (8%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEE 106
S++ +++ L+P+VT EDL + FS++GE+ +I + + GFV F+NR +A
Sbjct: 798 STHANLYINRLEPHVTKEDLAEAFSKFGELVETRILMDLNTNTSRCVGFVHFSNRRDALA 857
Query: 107 ALHKLNGTVIGKQS 120
AL +NG I +QS
Sbjct: 858 ALSAMNGANISQQS 871
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 17/101 (16%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK-----------------GCGFVQF 98
T + V + + T+EDL+ F ++GEI S K+ + G GFV+F
Sbjct: 704 TNLIVHNIPKHFTNEDLKDLFEEFGEIESYKVVANRKAPSTLLPQQPPPQANMGYGFVKF 763
Query: 99 ANRENAEEALHKLNGTVIGKQSFRADYGNQWSGAYYGGQVY 139
+ E+A A+ +NG + ++ + Y S +Y
Sbjct: 764 VHSESAAAAIESMNGHMTDSKTIKVSYATPTSQQSTHANLY 804
>gi|367026720|ref|XP_003662644.1| hypothetical protein MYCTH_2303522 [Myceliophthora thermophila ATCC
42464]
gi|347009913|gb|AEO57399.1| hypothetical protein MYCTH_2303522 [Myceliophthora thermophila ATCC
42464]
Length = 500
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E S++ IFVG L V DE L Q FS +G I+ ++ +G GFV F R +
Sbjct: 174 EDTSNHFHIFVGDLSNEVNDEVLFQAFSAFGSISEARVMWDMKTGRSRGYGFVAFRERAD 233
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
AE+AL ++G +G ++ R ++ NQ
Sbjct: 234 AEKALSSMDGEWLGSRAIRCNWANQ 258
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC-----GFVQFANRENAEEALHKLN 112
++VGGLDP VT++ LRQ F G + SVKI K GFV++ + AE A+ LN
Sbjct: 92 LYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKNAKGYNYGFVEYDDPGAAERAMQTLN 151
Query: 113 GTVIGKQSFRADYGNQ 128
G + + R ++ Q
Sbjct: 152 GRRVHQSEIRVNWAYQ 167
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TT +VG L P T D+ F +G + + +G F++ ENA A+ +LNG
Sbjct: 306 TTCYVGNLTPYTTQTDIVPLFQNFGFVVESRFQADRGFAFIKMDTHENAAMAICQLNGYN 365
Query: 116 IGKQSFRADYG 126
+ + + +G
Sbjct: 366 VNGRPLKCSWG 376
>gi|148666754|gb|EDK99170.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_d
[Mus musculus]
Length = 385
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S S+ +N T++
Sbjct: 163 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VSQSSPNNCTVYC 217
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F++ E+A A+ +NGT I
Sbjct: 218 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHV 277
Query: 121 FRADYGNQ 128
+ +G +
Sbjct: 278 VKCYWGKE 285
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG
Sbjct: 89 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGY 148
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV F N+ +AE A+ ++ G +G + R ++ +
Sbjct: 149 GFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATR 183
>gi|402079107|gb|EJT74372.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 482
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E S++ IFVG L V DE L Q FS +G ++ ++ +G GFV F +R +
Sbjct: 172 EDTSNHFHIFVGDLSNEVNDEVLTQAFSVFGSVSEARVMWDMKTGRSRGYGFVAFRDRPD 231
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
AE+AL ++G +G ++ R ++ NQ
Sbjct: 232 AEKALSSMDGEWLGSRAIRCNWANQ 256
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC-----GFVQFANRENAEEALHKLN 112
++VGGLD VT++ LRQ F G + +VKI K GFV++ + A+ A+ LN
Sbjct: 89 LYVGGLDARVTEDVLRQIFETTGHVQNVKIIPDKNAKGFNYGFVEYDDPGAADRAMQTLN 148
Query: 113 GTVIGKQSFRADYGNQ 128
G + + R ++ Q
Sbjct: 149 GRRVHQSEIRVNWAYQ 164
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 57/139 (41%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG-------YASNGAPGQGPQS---- 49
++ M+G + SR +R A + QQ + Q Y + P G QS
Sbjct: 236 LSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQAMGMTPTTPYGHHHFPTHGMQSYEMV 295
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ + TT +VG L P T DL F +G + + +G F++ ENA A
Sbjct: 296 LNQTPAYQTTCYVGNLTPYTTANDLVPLFQNFGYVVESRFQSDRGFAFIKMDTHENATSA 355
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ LNG + + + +G
Sbjct: 356 ICNLNGYNVNGRPLKCSWG 374
>gi|358397912|gb|EHK47280.1| hypothetical protein TRIATDRAFT_165657, partial [Trichoderma
atroviride IMI 206040]
Length = 465
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E S++ IFVG L V D+ L Q FS +G ++ ++ +G GFV F +R +
Sbjct: 160 EDTSNHFHIFVGDLSNEVNDDILHQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPD 219
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
AE+AL ++G +G ++ R ++ NQ
Sbjct: 220 AEKALSSMDGEWLGSRAIRCNWANQ 244
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC-----GFVQFANRENAEEALHKLN 112
++VGGLD VT++ LRQ F G + +VKI K GFV++ + A+ A+ LN
Sbjct: 78 LYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGYNYGFVEYDDPGAADRAMATLN 137
Query: 113 GTVIGKQSFRADYGNQ 128
G + + R ++ Q
Sbjct: 138 GRRVHQSEIRVNWAYQ 153
Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 34/71 (47%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TT +VG L P T D+ F +G + + +G F++ ENA A+ ++NG
Sbjct: 292 TTCYVGNLTPYTTHTDVVPLFQNFGFVVESRFQADRGFAFIKMDTHENAAMAICQMNGYN 351
Query: 116 IGKQSFRADYG 126
+ + + +G
Sbjct: 352 VNGRPLKCSWG 362
>gi|358059025|dbj|GAA95206.1| hypothetical protein E5Q_01862 [Mixia osmundae IAM 14324]
Length = 352
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRE 102
E +++ +F G L P VTD+ L++ FS +G ++ ++ +G GF+ F +R
Sbjct: 96 KEDVTNHFHVFCGDLSPEVTDDILQKTFSAFGSLSDARVMWDMASGKSRGYGFLAFRDRA 155
Query: 103 NAEEALHKLNGTVIGKQSFRADYGNQ 128
+AE A++ +NG +G ++ R ++ NQ
Sbjct: 156 DAEAAINAMNGEWLGSRAIRVNWANQ 181
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 8/135 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK--------SSGYQQQYSSQGGYASNGAPGQGPQSEGD 52
+ MNG + SR +R+ A + + GG+ G+ ++
Sbjct: 161 INAMNGEWLGSRAIRVNWANQKNQGMMGDGGMGEGPPPPARSGGFQVGGSDYNMVVTQTP 220
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
SNTT++VG L P T DL F YG I +++ +G FV+ E+A A+ L
Sbjct: 221 VSNTTVYVGNLVPYCTQADLIPLFQGYGYIVEIRMQADRGFAFVKLDTHEHAAMAIAYLT 280
Query: 113 GTVIGKQSFRADYGN 127
G + +S + +G
Sbjct: 281 GQMCQGRSLKCSWGK 295
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-------GKGCGFVQFANREN 103
G++ +++G + P VT+ L++ F+ G + VKI G GFV+F +
Sbjct: 7 GENKRPHLYIGNISPRVTEYMLQEVFALAGPVQQVKIIPDRTFQHGGLNYGFVEFYTMQG 66
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
AE+AL L G + + ++ Q
Sbjct: 67 AEQALQTLAGRKLFDTEMKVNWAYQ 91
>gi|169614620|ref|XP_001800726.1| hypothetical protein SNOG_10456 [Phaeosphaeria nodorum SN15]
gi|160702784|gb|EAT81850.2| hypothetical protein SNOG_10456 [Phaeosphaeria nodorum SN15]
Length = 506
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E S++ IFVG L V DE L Q FS +G ++ ++ +G GFV F +R +
Sbjct: 177 EDTSNHFHIFVGDLSNEVNDEVLLQAFSTFGPVSEARVMWDMKTGRSRGYGFVAFRDRAD 236
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
AE AL ++G +G ++ R ++ NQ
Sbjct: 237 AERALSSMDGEWLGSRAIRCNWANQ 261
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 46/101 (45%), Gaps = 13/101 (12%)
Query: 41 GAPGQGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC------ 93
G PG P+ N ++VGGLDP VT++ LRQ F G + SVKI K
Sbjct: 70 GGPGYVPRRAAPEPNKRALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTVSSPSVN 129
Query: 94 ------GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV++ + AE + LNG I R ++ Q
Sbjct: 130 SKGFNYGFVEYDDPGAAERGMATLNGRRIHNNEIRVNWAYQ 170
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR--KSSGYQQQYSSQG-----GYASNGAPGQGPQS---- 49
++ M+G + SR +R A + S QQ +S G + + P QG QS
Sbjct: 241 LSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMASMGMTPTTPFGHHHFPTQGVQSYDMV 300
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P + DL F +G + + +G F++ ENA A
Sbjct: 301 VAQTPQWQTTCYVGNLTPYTSQSDLVPLFQNFGYVTETRFQSDRGFAFIKMDTHENAAMA 360
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ +LNG + + + +G
Sbjct: 361 ICQLNGYNVNGRPLKCSWG 379
>gi|380023603|ref|XP_003695607.1| PREDICTED: nucleolin-like [Apis florea]
Length = 360
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 65/127 (51%), Gaps = 11/127 (8%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSS--NTTIFVG 61
MNG + SR +R AT RK + + +N P + SS N T++ G
Sbjct: 94 MNGQWLGSRSIRTNWAT-RKPPAPKSE--------ANAKPLTFDEVYNQSSPTNCTVYCG 144
Query: 62 GLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSF 121
GL +T+E +++ FS +G I +++ KG F++F+ +E+A A+ ++ T I Q+
Sbjct: 145 GLTNGLTEELMQKTFSPFGSIQEIRVFKDKGYAFIRFSTKESATHAIVAVHNTDINGQTV 204
Query: 122 RADYGNQ 128
+ +G +
Sbjct: 205 KCSWGKE 211
>gi|46122079|ref|XP_385593.1| hypothetical protein FG05417.1 [Gibberella zeae PH-1]
Length = 473
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E S++ IFVG L V DE L Q FS +G ++ ++ +G GFV F +R
Sbjct: 166 EDTSNHFHIFVGDLSNEVNDEVLTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPE 225
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
AE+AL ++G +G ++ R ++ NQ
Sbjct: 226 AEKALSSMDGEWLGSRAIRCNWANQ 250
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC-----GFVQFANRENAEE 106
+ + +++GGLD VT+E LRQ F G + +VKI K GFV++ + AE
Sbjct: 78 EPNKRALYIGGLDQRVTEEVLRQIFETTGHVQNVKIIPDKNARGYNYGFVEYDDPGAAER 137
Query: 107 ALHKLNGTVIGKQSFRADYGNQ 128
A+ LNG + + R ++ Q
Sbjct: 138 AMQTLNGRRVHQSEIRVNWAYQ 159
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 37/74 (50%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
S TT++VG L P T D+ F +G + + +G F++ + ENA A+ ++N
Sbjct: 295 SWQTTVYVGNLTPYTTPNDVVPLFQNFGFVVESRFQADRGFAFIKMDSHENAAMAICQMN 354
Query: 113 GTVIGKQSFRADYG 126
G + + + +G
Sbjct: 355 GYNVNGRPLKCSWG 368
>gi|336376899|gb|EGO05234.1| hypothetical protein SERLA73DRAFT_44756 [Serpula lacrymans var.
lacrymans S7.3]
Length = 523
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 54/91 (59%), Gaps = 7/91 (7%)
Query: 45 QGPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQ 97
QG Q++ D++ + +FVG L P V DE L + FS +G ++ ++ +G GF+
Sbjct: 93 QGQQNKEDTTGHYHVFVGDLSPEVNDEILGKAFSAFGTMSDARVMWDMNSGKSRGYGFLA 152
Query: 98 FANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
F ++ +AE+A+ +NG +G ++ R ++ NQ
Sbjct: 153 FRDKTDAEQAIATMNGEWLGSRAIRVNWANQ 183
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 24/183 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQ-----GPQS------ 49
+ MNG + SR +R+ A +K+ G S A+ GAP GP S
Sbjct: 163 IATMNGEWLGSRAIRVNWAN-QKTQGSVAVASPPRPGATGGAPAPINFQGGPLSYDSVVQ 221
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 109
+ S N+T++VG L P T DL F G ++ +++ +G FV+ E+A A+
Sbjct: 222 QTPSYNSTVYVGNLVPYCTQADLIPLFQSIGYLSEIRMQADRGFAFVKLDTHEHAAMAIV 281
Query: 110 KLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPVYG 169
+L G ++ + + +G + DG P P A+A YG P+YG
Sbjct: 282 QLQGQMVHGRPIKCSWGKDRA---------DG---TTAQPGGPLSPTPASAPYGNLPMYG 329
Query: 170 SHQ 172
Q
Sbjct: 330 MPQ 332
Score = 43.1 bits (100), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 13/95 (13%)
Query: 41 GAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-------GKGC 93
G P + P+ ++VG L P VT+ L + F+ G + VKI G
Sbjct: 5 GGPAEAPR------RAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNY 58
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV++ + AE AL LNG I R ++ Q
Sbjct: 59 GFVEYMDMRAAETALQTLNGRKIFDTEIRVNWAYQ 93
>gi|77166221|ref|YP_344746.1| RNA-binding protein, RNP-1 [Nitrosococcus oceani ATCC 19707]
gi|254435869|ref|ZP_05049376.1| RNA-binding protein [Nitrosococcus oceani AFC27]
gi|76884535|gb|ABA59216.1| RNA-binding protein, RNP-1 [Nitrosococcus oceani ATCC 19707]
gi|207088980|gb|EDZ66252.1| RNA-binding protein [Nitrosococcus oceani AFC27]
Length = 119
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 7/71 (9%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALH 109
I+VG L VTDEDLR F YGE++S K+ V KG GFV+ A++E+AE A+
Sbjct: 18 VNIYVGNLSYQVTDEDLRAAFENYGEVSSAKVIVDKFSNRSKGFGFVEMASKEDAEAAIK 77
Query: 110 KLNGTVI-GKQ 119
+++ + I G+Q
Sbjct: 78 EMHDSDIKGRQ 88
>gi|322795213|gb|EFZ18035.1| hypothetical protein SINV_11488 [Solenopsis invicta]
Length = 455
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Query: 40 NGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 92
N A G Q + D+SN IFVG L P + + L++ F+ +GEI++ +I KG
Sbjct: 151 NWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKG 210
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSFRADY 125
FV F + AE A++ +NG +G +S R ++
Sbjct: 211 YAFVSFVKKSEAEAAINAMNGQWLGSRSIRTNW 243
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 55/125 (44%), Gaps = 13/125 (10%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGL 63
MNG + SR +R +T S + +++N P + ++ GG
Sbjct: 229 MNGQWLGSRSIRTNWST----RKPPPPRSERPRHSNNSKP---------NYEEVLYCGGF 275
Query: 64 DPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRA 123
+TDE +++ FS +G I +++ KG F++F +E A A+ + T I +
Sbjct: 276 TNGITDELIKKTFSPFGTIQDIRVFKDKGYAFIKFTTKEAATHAIESTHNTEINGSIVKC 335
Query: 124 DYGNQ 128
+G +
Sbjct: 336 FWGKE 340
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 108
+S+ T++VG LD V+++ L FSQ G + KI P FV+F N + A AL
Sbjct: 76 ESNPRTLYVGNLDTTVSEDLLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQCAATAL 135
Query: 109 HKLNGTVIGKQSFRADY----GNQ 128
+N ++ + ++ GNQ
Sbjct: 136 AAMNKRSFLEKEMKVNWATSPGNQ 159
>gi|10801574|dbj|BAB16700.1| TIA-1 like protein [Bombyx mori]
Length = 285
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 40 NGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 92
N A G Q + D+SN IFVG L P + LR+ F+ +GEI++ +I KG
Sbjct: 79 NWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKG 138
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
FV F + +AE A+ +NG +G +S R ++ +
Sbjct: 139 YAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTR 174
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQ-PFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
+NTT++ GG N+ E+L Q FSQ+G+I +++ KG F++F +E A A+ +
Sbjct: 206 TNTTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVFRDKGYAFIRFTTKEAAAHAIEATH 265
Query: 113 GTVIGKQSFRADYG-NQW 129
T I + + +G +W
Sbjct: 266 NTEISGHTVKCFWGEREW 283
>gi|413920410|gb|AFW60342.1| nucleolysin TIAR [Zea mays]
Length = 447
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 8/136 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQG---PQSEGDSSN-- 55
+ ++NG + +R +R AT ++G ++Q SNG+ G P +G +N
Sbjct: 218 INDLNGKWLGNRQIRCNWATKGANAGEEKQILDTKVDLSNGSSESGKENPNEDGPENNPQ 277
Query: 56 -TTIFVGGLDPNVTDEDLRQPFSQYG--EIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
TT++VG L T D+ F G I V++ KG GFV+++ E A A+ N
Sbjct: 278 FTTVYVGNLPHEATMNDVHLFFHSLGAGSIEEVRVTRDKGFGFVRYSTHEEAALAIQMGN 337
Query: 113 GTVIGKQSFRADYGNQ 128
G +IG + + +G++
Sbjct: 338 GQLIGGRQIKCSWGSK 353
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E S + IFVG L P VTD L FS Y + ++ +G GFV F N+++
Sbjct: 154 EDTSGHFNIFVGDLCPEVTDATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQD 213
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQWSGAYYGGQVYD 140
A+ A++ LNG +G + R ++ + + A Q+ D
Sbjct: 214 AQSAINDLNGKWLGNRQIRCNWATKGANAGEEKQILD 250
>gi|408392881|gb|EKJ72170.1| hypothetical protein FPSE_07657 [Fusarium pseudograminearum CS3096]
Length = 484
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E S++ IFVG L V DE L Q FS +G ++ ++ +G GFV F +R
Sbjct: 177 EDTSNHFHIFVGDLSNEVNDEVLTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPE 236
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
AE+AL ++G +G ++ R ++ NQ
Sbjct: 237 AEKALSSMDGEWLGSRAIRCNWANQ 261
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC-----GFVQFANRENAEEALHKLN 112
+++GGLD VT+E LRQ F G + +VKI K GFV++ + AE A+ LN
Sbjct: 84 LYIGGLDQRVTEEVLRQIFETTGHVQNVKIIPDKNARGYNYGFVEYDDPGAAERAMQTLN 143
Query: 113 GTVI 116
G +
Sbjct: 144 GRRV 147
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 37/74 (50%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
S TT++VG L P T D+ F +G + + +G F++ + ENA A+ ++N
Sbjct: 306 SWQTTVYVGNLTPYTTPNDVVPLFQNFGFVVESRFQADRGFAFIKMDSHENAAMAICQMN 365
Query: 113 GTVIGKQSFRADYG 126
G + + + +G
Sbjct: 366 GYNVNGRPLKCSWG 379
>gi|395645925|ref|ZP_10433785.1| RNP-1 like RNA-binding protein [Methanofollis liminatans DSM 4140]
gi|395442665|gb|EJG07422.1| RNP-1 like RNA-binding protein [Methanofollis liminatans DSM 4140]
Length = 86
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 113
+ ++VG L +VT++ L + FSQYG++ SVKI KG GFV+ + E AE+A LN
Sbjct: 2 ETSRLYVGNLTYSVTEKQLEELFSQYGDVKSVKIIGDKGFGFVEMGSPEEAEKAKEALNE 61
Query: 114 TVIGKQSFRAD 124
TV ++ R D
Sbjct: 62 TVFVGRTLRID 72
>gi|6755783|ref|NP_035715.1| nucleolysin TIA-1 isoform 1 [Mus musculus]
gi|1729966|sp|P52912.1|TIA1_MOUSE RecName: Full=Nucleolysin TIA-1; AltName: Full=RNA-binding protein
TIA-1; AltName: Full=T-cell-restricted intracellular
antigen-1; Short=TIA-1
gi|437057|gb|AAA03711.1| TIA [Mus musculus]
gi|1616673|gb|AAC52871.1| RNA binding protein TIA-1 [Mus musculus]
gi|26353510|dbj|BAC40385.1| unnamed protein product [Mus musculus]
gi|74188216|dbj|BAE25782.1| unnamed protein product [Mus musculus]
gi|148666751|gb|EDK99167.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_a
[Mus musculus]
Length = 386
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S S+ +N T++
Sbjct: 164 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VSQSSPNNCTVYC 218
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F++ E+A A+ +NGT I
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHV 278
Query: 121 FRADYGNQ 128
+ +G +
Sbjct: 279 VKCYWGKE 286
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 111
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 112 NGTVIGKQSFRADYGNQ 128
G +G + R ++ +
Sbjct: 168 GGQWLGGRQIRTNWATR 184
>gi|387907184|ref|YP_006337520.1| RNA-binding protein [Blattabacterium sp. (Blaberus giganteus)]
gi|387582077|gb|AFJ90855.1| RNA-binding protein [Blattabacterium sp. (Blaberus giganteus)]
Length = 90
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 43/68 (63%), Gaps = 8/68 (11%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV--------GKGCGFVQFANRENAEE 106
NT ++VG L ++T+++L++ F GE+ VKI KG GF++ +N ENA++
Sbjct: 3 NTKLYVGNLSYDMTEQELKKYFESVGEVTHVKIIFDESTSSKRSKGFGFIEMSNEENAKQ 62
Query: 107 ALHKLNGT 114
A+ KLNGT
Sbjct: 63 AIEKLNGT 70
>gi|410080926|ref|XP_003958043.1| hypothetical protein KAFR_0F03120 [Kazachstania africana CBS 2517]
gi|372464630|emb|CCF58908.1| hypothetical protein KAFR_0F03120 [Kazachstania africana CBS 2517]
Length = 412
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEALHK 110
T+F+G L N +++ + FS++GEI SV+IP KG G+VQ+ N E+A++AL
Sbjct: 266 TLFLGNLSFNADRDNISEMFSKFGEIVSVRIPTHPETEQPKGFGYVQYTNVEDAKKALDA 325
Query: 111 LNGTVIGKQSFRADY 125
L G I + R D+
Sbjct: 326 LQGEYIDNRPVRLDF 340
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC------GFVQFANRENAEEALHK 110
TIFVG L ++ DE L+ F G + ++ +G G+V F N+E AE+A+ +
Sbjct: 166 TIFVGRLSWSIDDEWLKNEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKEYAEKAVKE 225
Query: 111 LNGTVIGKQSFRAD 124
++G I + D
Sbjct: 226 MHGKEIDGREINCD 239
>gi|355724189|gb|AES08142.1| TIA1 cytotoxic granule-associated RNA binding protein [Mustela
putorius furo]
Length = 261
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S ++ SN T++
Sbjct: 40 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VNQSSPSNCTVYC 94
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NGT I
Sbjct: 95 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHV 154
Query: 121 FRADYGNQ 128
+ +G +
Sbjct: 155 VKCYWGKE 162
>gi|351714346|gb|EHB17265.1| Nucleolysin TIA-1 isoform p40 [Heterocephalus glaber]
Length = 386
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S S+ SN T++
Sbjct: 164 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VSQSSPSNCTVYC 218
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NGT I
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHV 278
Query: 121 FRADYGNQ 128
+ +G +
Sbjct: 279 VKCYWGKE 286
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 111
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 112 NGTVIGKQSFRADYGNQ 128
G +G + R ++ +
Sbjct: 168 GGQWLGGRQIRTNWATR 184
>gi|427796663|gb|JAA63783.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 965
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 26/119 (21%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGC 93
P G GD + T +++G L+P +T+++L + F +YG +ASVKI + C
Sbjct: 183 PSLGSFDTGDPNTTNLYLGNLNPKMTEQELCEIFGRYGPLASVKIMWPRSQEERQRKRNC 242
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDP 152
GFV + NR++ E A+ L+G + G ++ G+G A+P P P
Sbjct: 243 GFVAYMNRKDGERAIKHLSGQEV-----------------MGFEMKMGWGKAVPIPPHP 284
>gi|392575524|gb|EIW68657.1| hypothetical protein TREMEDRAFT_71869 [Tremella mesenterica DSM
1558]
Length = 389
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 111
+FVG L P V D+ L + F +G ++ ++ +G GF+ F RE+AE+A++ +
Sbjct: 109 VFVGDLSPEVNDDVLAKAFGAFGSMSEARVMWDMNSGKSRGYGFLSFRKREDAEQAINTM 168
Query: 112 NGTVIGKQSFRADYGNQ 128
NG +G ++ R ++ NQ
Sbjct: 169 NGEWLGSRAIRVNWANQ 185
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T+FVG L P VT +L F YG + +++ +G FV+ + A A+ L T
Sbjct: 249 NCTLFVGNLGPYVTQAELTPLFQTYGYVTDIRMQADRGYAFVKLDTSQAAVSAMATLQNT 308
Query: 115 VIGKQSFRADYGNQ 128
++ + + +G +
Sbjct: 309 MVQGRPLKIQWGRE 322
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 17/115 (14%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKI-------PVGKGCGFVQFANRENAEEALHK 110
++VG L P VTD L + F+ G + + KI G GFV++ + +AE+A+
Sbjct: 26 LYVGNLSPRVTDYMLTEIFAVAGPVVNAKIIQDRNFQHAGFNYGFVEYIDMRSAEQAIQT 85
Query: 111 LNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAY 165
LN G++ F A+ + V+ G P ND + A A+GA+
Sbjct: 86 LN----GRKIFDAEVKQNKEDTQHHHHVF--VGDLSPEVNDDVL----AKAFGAF 130
>gi|331230317|ref|XP_003327823.1| hypothetical protein PGTG_08590 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|403168138|ref|XP_003889766.1| hypothetical protein, variant 2 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|403168140|ref|XP_003889767.1| hypothetical protein, variant 1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309306813|gb|EFP83404.1| hypothetical protein PGTG_08590 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167366|gb|EHS63397.1| hypothetical protein, variant 2 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167367|gb|EHS63398.1| hypothetical protein, variant 1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 471
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 49/85 (57%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E S++ +FVG L P V DE L + F+ +G ++ ++ +G GF+ F ++ +
Sbjct: 196 EDLSTHYHVFVGDLSPEVNDEVLAKAFAAFGSLSDARVMWDMNSGKSRGYGFLAFRDKTD 255
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
AE+A+ +NG +G ++ R ++ NQ
Sbjct: 256 AEQAIATMNGEWLGSRAIRVNWANQ 280
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 62/152 (40%), Gaps = 30/152 (19%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGA---PGQGPQS-------- 49
+ MNG + SR +R+ A + +QG A+ GA PG G
Sbjct: 260 IATMNGEWLGSRAIRVNWANQK----------NQGMAATPGAVIAPGMGSGGMNRGGFGG 309
Query: 50 ---------EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
+ + NTT++ G L P T DL F +G I +++ +G FV+
Sbjct: 310 ATNYEAVVQQAPAYNTTVYTGNLVPYSTQADLIPLFQGFGYIVEIRMQADRGFAFVKMDT 369
Query: 101 RENAEEALHKLNGTVIGKQSFRADYGNQWSGA 132
ENA A+ L GT + + + +G + A
Sbjct: 370 HENAAMAIVNLTGTPVHGRPLKCSWGKDRASA 401
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-------GKGCGFVQFANRENAEEALHK 110
++VG L P VT+ L++ FS G + VKI G GFV++ +AE AL
Sbjct: 111 LYVGNLSPRVTEYMLQEIFSVAGPVQGVKIIPDRNFQHGGLNYGFVEYYEMRSAETALQT 170
Query: 111 LNGTVIGKQSFRADYGNQ 128
L G I R ++ Q
Sbjct: 171 LGGRKIFDTEIRVNWAYQ 188
>gi|12848148|dbj|BAB27847.1| unnamed protein product [Mus musculus]
Length = 338
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 9/71 (12%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFANR 101
GD S T +++G ++P + +E L Q F ++G +ASVKI + CGFV F NR
Sbjct: 268 GDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNR 327
Query: 102 ENAEEALHKLN 112
+AE AL LN
Sbjct: 328 RDAERALKNLN 338
>gi|321262697|ref|XP_003196067.1| non-translatable mRNA -binding protein [Cryptococcus gattii WM276]
gi|317462542|gb|ADV24280.1| Non-translatable mRNA -binding protein, putative [Cryptococcus
gattii WM276]
Length = 434
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 45 QGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQ 97
QG Q++ D+ + +FVG L P V D+ L + F +G ++ ++ +G GF+
Sbjct: 101 QGNQNKEDTQHHYHVFVGDLSPEVNDDVLSKAFGAFGSLSEARVMWDMNSGKSRGYGFLS 160
Query: 98 FANRENAEEALHKLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAA 157
F ++ +AE+A+ +NG +G ++ R ++ NQ + Y+ PP P + A
Sbjct: 161 FRDKADAEQAIASMNGEWLGSRAIRVNWANQKTQTGGTRTGGGTPSYSAPPMGAPPVPAG 220
Query: 158 AAAAY 162
+AY
Sbjct: 221 VPSAY 225
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
NTT++VG L P T DL F YG I +++ +G FV+ +NA A+ L
Sbjct: 256 NTTVYVGNLIPYTTQADLIPLFQGYGYIVEIRMQADRGFAFVKLDTHQNAALAITHLQNQ 315
Query: 115 VIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSM 154
++ + + +G G+ GG GY PP P +
Sbjct: 316 LVHGRPIKCSWGKD-KGSMEGGAPAAGY-----PPMQPQL 349
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC-------GFVQFANRENAEEALHK 110
++VG L P VTD L + F+ G + S KI + GFV++A+ +AE+AL
Sbjct: 24 LYVGNLSPRVTDYILTEIFAVAGPVVSAKIIQDRNFQHGGFNYGFVEYADMRSAEQALTT 83
Query: 111 LNGTVIGKQSFRADYGNQ 128
LNG I R ++ Q
Sbjct: 84 LNGRKIFDAEIRVNWAYQ 101
>gi|218201471|gb|EEC83898.1| hypothetical protein OsI_29913 [Oryza sativa Indica Group]
Length = 407
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGA---PG-QGPQSEGDSSN- 55
+TEM G + SR +R AT + Q+ + +NG+ PG + Q G N
Sbjct: 176 ITEMTGKWLGSRQIRCNWATKNNAEEKQETDNHNAVVLTNGSSSNPGMEASQDTGSKENP 235
Query: 56 ------TTIFVGGLDPNVTDEDLRQPFSQYG--EIASVKIPVGKGCGFVQFANRENAEEA 107
TT++VG L V ++L + F G I V++ KG GFV+++N A A
Sbjct: 236 ENNPDCTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQDKGFGFVRYSNHGEAALA 295
Query: 108 LHKLNGTVIGKQSFRADYGNQ 128
+ NG V+ + + +GN+
Sbjct: 296 IQMANGLVVRGKPIKCSWGNK 316
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC--GFVQFANRENAEEALHK 110
S+ +++VG + PNVT+ L + F G + K+ + GFV + +R +A A+
Sbjct: 70 STCRSVYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSSFGFVDYYDRRSAALAIMT 129
Query: 111 LNGTVIGKQSFRADY 125
L+G I Q+ + ++
Sbjct: 130 LHGRHICGQAIKVNW 144
>gi|218197672|gb|EEC80099.1| hypothetical protein OsI_21840 [Oryza sativa Indica Group]
Length = 617
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 41 GAPGQGPQ--SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
G G+ P D S T+++GGL+ +T++DLR F +GEI S+++ + + C FV +
Sbjct: 343 GKAGEMPSLTPPDDESIRTLYIGGLNNRITEQDLRDQFYAHGEIESIRMVLQRACAFVTY 402
Query: 99 ANRENAEEALHKLNGTVIGK 118
RE AE+A +L ++ K
Sbjct: 403 TTREGAEKAAEELANKLVIK 422
>gi|197210363|gb|ACH48189.1| alternative splicing factor SRp20/9G8 [Haplopelma schmidti]
Length = 139
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG-KGCGFVQFANRENAEEALHKLNGT 114
T+IFVGGL+ ++ EDL + FS++G++ V + G F++F + E+A EA+ ++NG
Sbjct: 4 TSIFVGGLNDSIDKEDLEREFSKFGKLNHVWVARNPPGFAFIEFDDDEDANEAIREMNGA 63
Query: 115 VIGKQSFRAD 124
I R D
Sbjct: 64 TINGSEIRVD 73
>gi|340522219|gb|EGR52452.1| predicted protein [Trichoderma reesei QM6a]
Length = 477
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E S++ IFVG L V D+ L Q FS +G ++ ++ +G GFV F +R +
Sbjct: 159 EDTSNHFHIFVGDLSNEVNDDILMQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPD 218
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
AE+AL ++G +G ++ R ++ NQ
Sbjct: 219 AEKALSSMDGEWLGSRAIRCNWANQ 243
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC-----GFVQFANRENAEEALHKLN 112
++VGGLD VT++ LRQ F G + +VKI K GFV++ + AE A+ LN
Sbjct: 77 LYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGYNYGFVEYDDPGAAERAMQTLN 136
Query: 113 GTVIGKQSFRADYGNQ 128
G + + R ++ Q
Sbjct: 137 GRRVHQSEIRVNWAYQ 152
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 35/71 (49%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TT +VG L P T D+ F +G + + +G F++ + ENA A+ ++NG
Sbjct: 291 TTCYVGNLTPYTTPNDVVPLFQNFGFVMESRFQADRGFAFIKMDSHENAAMAICQMNGYN 350
Query: 116 IGKQSFRADYG 126
+ + + +G
Sbjct: 351 VNGRPLKCSWG 361
>gi|326473644|gb|EGD97653.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton tonsurans CBS 112818]
Length = 470
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E SS+ IFVG L V DE L Q FS G ++ ++ +G GFV F R +
Sbjct: 154 EDTSSHFHIFVGDLSNEVNDEVLLQAFSACGSVSEARVMWDMKTGRSRGYGFVAFRERAD 213
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
AE+AL ++G +G ++ R ++ NQ
Sbjct: 214 AEKALSSMDGEWLGSRAIRCNWANQ 238
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGG------YASNGAPGQGPQS---- 49
++ M+G + SR +R A + + S QQQ + G + + P G QS
Sbjct: 218 LSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMV 277
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T DL F +G + + +G FV+ ENA A
Sbjct: 278 VQQTPQWQTTCYVGNLTPYTTQNDLIPLFQNFGYVVETRFQADRGFAFVKMDTHENAAMA 337
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ +LNG + + + +G
Sbjct: 338 ICQLNGYNVNGRPLKCSWG 356
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Query: 16 IGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQP 75
I A SG ++ GGY AP + + ++VGGLDP VT++ L+Q
Sbjct: 70 IPTAITSPMSGNMMSPTAAGGYVRRSAP--------EPNKRALYVGGLDPRVTEDILKQI 121
Query: 76 FSQYGEIASVKIPVGKGCGFVQFANRENA 104
F G + SVKI K V +A + N
Sbjct: 122 FETTGHVQSVKIIPDKNEIRVNWAYQSNT 150
>gi|300113043|ref|YP_003759618.1| RNP-1 like RNA-binding protein [Nitrosococcus watsonii C-113]
gi|299538980|gb|ADJ27297.1| RNP-1 like RNA-binding protein [Nitrosococcus watsonii C-113]
Length = 118
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 7/71 (9%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALH 109
I+VG L VTDEDLR F YGE++S K+ V KG GFV+ A++E+AE A+
Sbjct: 18 VNIYVGNLSYQVTDEDLRAAFENYGEVSSAKVIVDKFSNRSKGFGFVEMASKEDAETAIK 77
Query: 110 KLNGTVI-GKQ 119
+++ + I G+Q
Sbjct: 78 EMHDSDIKGRQ 88
>gi|16549891|dbj|BAB70875.1| unnamed protein product [Homo sapiens]
Length = 450
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 63/140 (45%), Gaps = 27/140 (19%)
Query: 32 SSQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP 88
+++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 154 TTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEII 213
Query: 89 VG----KGCGFVQFANRENAEEALHKLNGTVIGKQSFRAD---------------YGNQW 129
KG GFV F N +A+ A KL+GTV+ + + Y N W
Sbjct: 214 FNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGW 273
Query: 130 S-----GAYYGGQVYDGYGY 144
GA YG ++Y + +
Sbjct: 274 KLSPVVGAVYGPELYAAFSF 293
>gi|449440159|ref|XP_004137852.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Cucumis sativus]
gi|449521207|ref|XP_004167621.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Cucumis sativus]
Length = 640
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 46/73 (63%), Gaps = 5/73 (6%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANRENAEE 106
D T ++V LDP + +E L++ FS++G+I+S+ I V +G GF+ F N ++A+
Sbjct: 189 DIKYTNLYVKNLDPEIGEEHLQEKFSEFGKISSMIISRDENGVSRGFGFINFENSDDAKR 248
Query: 107 ALHKLNGTVIGKQ 119
AL LNG+ +G +
Sbjct: 249 ALETLNGSQLGSK 261
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 5/65 (7%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANRENAEEALHK 110
+ ++V +D +VTDE+LR+ FSQ+G I S K+ + KG GFV F+N + A+ A++
Sbjct: 296 SNVYVKNIDDDVTDEELRERFSQFGTITSSKLMRDDKGINKGFGFVCFSNPDEAKRAVNT 355
Query: 111 LNGTV 115
L G +
Sbjct: 356 LQGCM 360
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG-----KGCGFVQFANRENAEEALHKLN 112
+FV L ++ L++ F ++G + S K+ KG GFVQF + E+A A+ LN
Sbjct: 104 VFVKNLSDSINSLGLQELFKKFGNVLSSKVATSDDGKSKGYGFVQFESEESANAAIESLN 163
Query: 113 GTVIGKQ 119
G +G +
Sbjct: 164 GFTVGDK 170
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI----PVGKGC--GFVQFANR 101
Q +S +++VG L P+VTD L FS + +ASV+I G+ G+V F +
Sbjct: 6 QPTAHASPASLYVGDLHPDVTDGQLFDAFSGFKSLASVRICRDSSTGRSLSYGYVNFISP 65
Query: 102 ENAEEALHKLNGTVIGKQSFRADYGNQWSGAYYGG 136
++A A+ +N +++ ++ R + + + A G
Sbjct: 66 QDATNAIEVMNHSMLNGRAIRVMWSRRDADARKSG 100
>gi|350582294|ref|XP_003481239.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Sus scrofa]
Length = 220
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
++ SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+
Sbjct: 41 NQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAI 100
Query: 109 HKLNGTVIGKQSFRADYGNQ 128
+NGT I + +G +
Sbjct: 101 VSVNGTTIEGHVVKCYWGKE 120
>gi|296815788|ref|XP_002848231.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Arthroderma otae CBS 113480]
gi|238841256|gb|EEQ30918.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Arthroderma otae CBS 113480]
Length = 507
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 13/109 (11%)
Query: 27 YQQQYSSQGGYASNGAPGQGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASV 85
+Q + Y SN A S+ D+SN IFVG L V DE L Q FS G ++
Sbjct: 170 HQSEIRVNWAYQSNTA------SKEDTSNHFHIFVGDLSNEVNDEVLLQAFSACGSVSEA 223
Query: 86 KIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
++ +G GFV F +R +AE+AL ++G +G ++ R ++ NQ
Sbjct: 224 RVMWDMKTGRSRGYGFVAFRDRADAEKALSSMDGEWLGSRAIRCNWANQ 272
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 15/120 (12%)
Query: 16 IGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQP 75
I A SG ++ GGY AP + + ++VGGLDP VT++ L+Q
Sbjct: 70 IPTAITSPMSGNMMSPTAAGGYVRRSAP--------EPNKRALYVGGLDPRVTEDILKQI 121
Query: 76 FSQYGEIASVKIPVGKGC-------GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
F G + SVKI K GF+++ + AE A+ LNG + + R ++ Q
Sbjct: 122 FETTGHVQSVKIIPDKNFQSKGLNYGFIEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQ 181
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGG------YASNGAPGQGPQS---- 49
++ M+G + SR +R A + + S QQQ + G + + P G QS
Sbjct: 252 LSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMV 311
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T DL F +G + + +G FV+ ENA A
Sbjct: 312 VQQTPQWQTTCYVGNLTPYTTQNDLIPLFQNFGYVVETRFQADRGFAFVKMDTHENAAMA 371
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ +LNG + + + +G
Sbjct: 372 ICQLNGYNVNGRPLKCSWG 390
>gi|356549892|ref|XP_003543324.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Glycine max]
Length = 258
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 13/124 (10%)
Query: 32 SSQGGYASNGAPGQGPQSE-GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG 90
S Y PG + E ++TT++VG + T+E + + FS+ GEI + + +
Sbjct: 9 SKISAYRDRRFPGTQEEFEHALVTSTTVYVGNMSFYTTEEQVYELFSRTGEIKKIIMGLD 68
Query: 91 KG----CG--FVQFANRENAEEALHKLNGTVIGKQSFRADY------GNQWSGAYYGGQV 138
K CG FV + +RE+ E+A ++GT++ + R D+ G QW GGQV
Sbjct: 69 KNTKTPCGFCFVLYYSREDTEDACKYISGTILDDRPIRVDFDWGFQEGRQWGRGRSGGQV 128
Query: 139 YDGY 142
D Y
Sbjct: 129 RDEY 132
>gi|290561328|gb|ADD38066.1| Pre-mRNA-splicing factor RBM22 [Lepeophtheirus salmonis]
Length = 362
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
++ D TT++VGGLD + ++D+ F QYGEI ++ + +GC FVQF+ R +AE A
Sbjct: 212 ETPEDPLITTLYVGGLDDVLDEKDISSHFYQYGEIRNITLVPKQGCAFVQFSKRSSAELA 271
Query: 108 LHK-LNGTVIGKQSFRADYG 126
K N VI + +G
Sbjct: 272 AEKTFNNLVIHGRKIIVRWG 291
>gi|171687054|ref|XP_001908468.1| hypothetical protein [Podospora anserina S mat+]
gi|170943488|emb|CAP69141.1| unnamed protein product [Podospora anserina S mat+]
Length = 481
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E S++ IFVG L V DE L Q FS +G ++ ++ +G GFV F +R
Sbjct: 172 EDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPE 231
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
AE+AL ++G +G ++ R ++ NQ
Sbjct: 232 AEKALSSMDGEWLGSRAIRCNWANQ 256
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 13/102 (12%)
Query: 32 SSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK 91
+S G +A AP + + ++VGGLDP VT++ LRQ F G + +VKI K
Sbjct: 72 TSGGPFARRAAP--------EPNKRALYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDK 123
Query: 92 GC-----GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV++ + +AE A+ LNG + + R ++ Q
Sbjct: 124 NAKGYNYGFVEYDDPGSAERAMQTLNGRRVHQAEIRVNWAYQ 165
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 32/68 (47%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TT +VG L P T DL F +G + + +G F++ ENA A+ +LNG
Sbjct: 304 TTCYVGNLTPYTTQNDLVPLFQNFGFVVESRFQADRGFAFIKMDTHENAAMAICQLNGYN 363
Query: 116 IGKQSFRA 123
+ + +
Sbjct: 364 VNGRPLKC 371
>gi|317030432|ref|XP_001392545.2| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus niger CBS 513.88]
Length = 478
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 55/121 (45%), Gaps = 16/121 (13%)
Query: 16 IGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQP 75
I A SG +S GG+ AP + + ++VGGLDP VT++ L+Q
Sbjct: 59 IPTAITSPMSGNMMSPTSAGGFVRRAAP--------EPNKRALYVGGLDPRVTEDILKQI 110
Query: 76 FSQYGEIASVKIPVGKGC--------GFVQFANRENAEEALHKLNGTVIGKQSFRADYGN 127
F G + SVKI K GFV+F + AE A+ LNG I + R ++
Sbjct: 111 FETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERAMQTLNGRRIHQSEIRVNWAY 170
Query: 128 Q 128
Q
Sbjct: 171 Q 171
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E S++ IFVG L V DE L Q FS +G ++ ++ +G GFV F R +
Sbjct: 178 EDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSD 237
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
A++AL ++G +G ++ R ++ NQ
Sbjct: 238 ADKALSSMDGEWLGSRAIRCNWANQ 262
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGGYASNGA------PGQGPQS---- 49
++ M+G + SR +R A + + S QQQ + G A P G QS
Sbjct: 242 LSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMV 301
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T DL F +G + ++ +G F++ ENA A
Sbjct: 302 VQQTPQWQTTCYVGNLTPYTTQTDLVPLFQNFGYVIETRLQADRGFAFIKMDTHENAAMA 361
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ +LNG + + + +G
Sbjct: 362 ICQLNGYNVNGRPLKCSWG 380
>gi|154269845|ref|XP_001535826.1| hypothetical protein HCAG_09244 [Ajellomyces capsulatus NAm1]
gi|150409464|gb|EDN04912.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 387
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E S++ IFVG L V DE L Q FS +G ++ ++ +G GFV F R +
Sbjct: 176 EDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERPD 235
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
AE+AL ++G +G ++ R ++ NQ
Sbjct: 236 AEKALSSMDGEWLGSRAIRCNWANQ 260
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 13/118 (11%)
Query: 16 IGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQP 75
I A +G SS GG+ AP + + +++GGLD VT++ LRQ
Sbjct: 60 IPTAITSPMTGNMMSPSSTGGFVRRAAP--------EPNKRALYIGGLDARVTEDILRQI 111
Query: 76 FSQYGEIASVKIPVGKGC-----GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
F G + SVKI K GFV++ + AE A+ LNG + + R ++ Q
Sbjct: 112 FETTGHVQSVKIIPDKNSKGLNYGFVEYDDPGAAERAMSTLNGRRVHQSEIRVNWAYQ 169
Score = 35.4 bits (80), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 13/115 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGG------YASNGAPGQGPQS---- 49
++ M+G + SR +R A + + S QQQ + G + + P G QS
Sbjct: 240 LSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPSTPFGHHHFPTHGVQSYDMV 299
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRE 102
+ TT +VG L P T DL F +G + + +G FV+ E
Sbjct: 300 AAQTPQWQTTCYVGNLTPYTTQNDLIPLFQNFGYVVETRFQTDRGFRFVKMDTHE 354
>gi|440635298|gb|ELR05217.1| hypothetical protein GMDG_01655 [Geomyces destructans 20631-21]
Length = 503
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E S++ IFVG L V DE L Q F +G ++ ++ +G GFV F R++
Sbjct: 176 EDTSNHFHIFVGDLSNEVNDEVLLQAFCAFGSVSEARVMWDMKTGRSRGYGFVAFRERQD 235
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
AE+AL ++G +G ++ R ++ NQ
Sbjct: 236 AEKALSSMDGEWLGSRAIRCNWANQ 260
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG 92
SQG + AP + + ++VGGLDP VT++ LRQ F G + +VKI K
Sbjct: 74 SQGRFVRRAAP--------EPNKRALYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKN 125
Query: 93 C--------GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV++ + AE A+ LNG + + R ++ Q
Sbjct: 126 VGASKGFNYGFVEYDDPGAAERAMQTLNGRRVHQAEIRVNWAYQ 169
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 57/139 (41%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG-------YASNGAPGQGPQS---- 49
++ M+G + SR +R A + QQ S + + P G QS
Sbjct: 240 LSSMDGEWLGSRAIRCNWANQKGQPSISQQQSMVSTGLTPTTPFGHHHFPTHGVQSYDMI 299
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT++VG L P T DL F +G + + +G FV+ ENA A
Sbjct: 300 VQQTPQWQTTVYVGNLTPYTTQNDLVPLFQNFGYVVETRFQSDRGFAFVKMDTHENAAMA 359
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ +L+G + + + +G
Sbjct: 360 ICQLSGYNVNGRPLKCSWG 378
>gi|406606542|emb|CCH42041.1| Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1
[Wickerhamomyces ciferrii]
Length = 482
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC-----GFVQFANRENAEE 106
+ SN ++VGGLD ++++ LR+ FSQ+GEI +VKI K F++F N NA
Sbjct: 98 EVSNKILYVGGLDKTISEDQLREIFSQHGEIDNVKILFDKNKQNFNYAFIEFQNELNASN 157
Query: 107 ALHKLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGA 164
A +LN + ++ Q A + ++ + + D AA Y +
Sbjct: 158 AFQELNNKTLQNSVISINWAYQSQQAKNSSEHFNIFVGDLSTEIDDEQLKAAFNEYKS 215
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQF 98
Q Q++ S + IFVG L + DE L+ F++Y + + +G GFV F
Sbjct: 179 QSQQAKNSSEHFNIFVGDLSTEIDDEQLKAAFNEYKSLVQAHVMWDMQSGRSRGYGFVSF 238
Query: 99 ANRENAEEALHKLNGTVIGKQSFRADYG 126
N+++AE AL G+ IG + R ++
Sbjct: 239 TNQQDAELALTTKQGSQIGNRQVRLNWA 266
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TT+++G L P T DL +G I +K K C F+++ + E A A+ +L+G +
Sbjct: 391 TTVYLGNLTPYTTQNDLIPLVQNFGYIVDLKFHQEKNCAFIKYDSHERAALAIVQLSGLI 450
Query: 116 IGKQSFRADYG 126
I + + +G
Sbjct: 451 INGRPLKTGWG 461
>gi|401404962|ref|XP_003881931.1| hypothetical protein NCLIV_016900 [Neospora caninum Liverpool]
gi|325116345|emb|CBZ51898.1| hypothetical protein NCLIV_016900 [Neospora caninum Liverpool]
Length = 894
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/93 (36%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGC 93
PG P S+T +++G L P +T+E L Q F +YG I SVKI + C
Sbjct: 168 PGAPPVDLEKESSTNLYLGNLSPEITEEFLCQQFGKYGNITSVKIMYPRTEEEKKRNRNC 227
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYG 126
GFV F +R AE A H L+G R +G
Sbjct: 228 GFVSFESRPQAEAAKHNLDGVAFYGMVIRIGWG 260
>gi|146422214|ref|XP_001487048.1| hypothetical protein PGUG_00425 [Meyerozyma guilliermondii ATCC
6260]
Length = 450
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 8/133 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAAT------PRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSS 54
+TE NG+ SR +R+G A P + + + +S P S D +
Sbjct: 240 LTEANGMVVGSRAIRVGMAAGSNKPQPVTNIVHSDRLASPAIEEEVKLPKHARFS--DPT 297
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N TI V GL VT+E+L S +GEI + G+V+F NR++AE A+ + G
Sbjct: 298 NNTIVVHGLSGKVTEEELALHLSSFGEILYCTLSSDFDSGYVKFYNRQDAETAIFFMYGQ 357
Query: 115 VIGKQSFRADYGN 127
+I + +G+
Sbjct: 358 IINDCRIQVSWGH 370
Score = 38.9 bits (89), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 56/115 (48%), Gaps = 12/115 (10%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G+ P S ++ +S+G + ++ +++ +IFVG L +V++ L + F
Sbjct: 145 GSPIPNSSKHFKLNIASRGKNTATDIQ----RNSKPANDFSIFVGDLAMDVSEPILYEAF 200
Query: 77 SQY--GEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSFRA 123
+ ++ VKI + KG GFV+F + +AL + NG V+G ++ R
Sbjct: 201 NSLFPDQVKQVKIMMDNSTRASKGFGFVRFFDANTQAKALTEANGMVVGSRAIRV 255
>gi|406864572|gb|EKD17617.1| RNA recognition domain-containing protein [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 821
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIG 117
++VG LD + T+E LRQ FS+YGEI V K C FV F N NA +A+ + G
Sbjct: 513 VYVGNLDESWTEERLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAIRGKDDY 572
Query: 118 KQSFRADYGNQWSG-----AYYGGQVYDGYGYAIPPP 149
++ F+ ++G G A Q G + PPP
Sbjct: 573 RR-FKVNFGKDRCGNPPRQAQSSAQSPRNDGVSSPPP 608
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 9/78 (11%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L+ +VT+++LR+ S++G I +VKI K
Sbjct: 266 GKPSQVPTSVALAVQQSGASRN--VYLGNLEESVTEDELREDLSKFGPIDTVKIVREKAI 323
Query: 94 GFVQFANRENAEEALHKL 111
GFV F + NA +A+ +L
Sbjct: 324 GFVHFLSIGNAIKAVAQL 341
>gi|294461052|gb|ADE76094.1| unknown [Picea sitchensis]
Length = 150
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 39 SNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KG 92
+N G+ N +FVGGL + ++ LR FS YGEI V++ + KG
Sbjct: 18 TNRLIGRLALVHSSGLNKKLFVGGLSFDTNEKVLRDAFSLYGEILEVRVIINRASGLSKG 77
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSFRADYGN 127
GFVQFA+ +A AL +++G + ++ R ++ N
Sbjct: 78 FGFVQFASETDAVNALKEMDGQSLDGRNIRVNFAN 112
>gi|358371808|dbj|GAA88414.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus kawachii IFO 4308]
Length = 478
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 55/121 (45%), Gaps = 16/121 (13%)
Query: 16 IGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQP 75
I A SG +S GG+ AP + + ++VGGLDP VT++ L+Q
Sbjct: 59 IPTAITSPMSGNMMSPTSAGGFVRRAAP--------EPNKRALYVGGLDPRVTEDILKQI 110
Query: 76 FSQYGEIASVKIPVGKGC--------GFVQFANRENAEEALHKLNGTVIGKQSFRADYGN 127
F G + SVKI K GFV+F + AE A+ LNG I + R ++
Sbjct: 111 FETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERAMQTLNGRRIHQSEIRVNWAY 170
Query: 128 Q 128
Q
Sbjct: 171 Q 171
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E S++ IFVG L V DE L Q FS +G ++ ++ +G GFV F R +
Sbjct: 178 EDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSD 237
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
A++AL ++G +G ++ R ++ NQ
Sbjct: 238 ADKALSSMDGEWLGSRAIRCNWANQ 262
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGGYASNGA------PGQGPQS---- 49
++ M+G + SR +R A + + S QQQ + G A P G QS
Sbjct: 242 LSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMV 301
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T DL F +G + ++ +G F++ ENA A
Sbjct: 302 VQQTPQWQTTCYVGNLTPYTTQTDLVPLFQNFGYVIETRLQADRGFAFIKMDTHENAAMA 361
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ +LNG + + + +G
Sbjct: 362 ICQLNGYNVNGRPLKCSWG 380
>gi|224106323|ref|XP_002314129.1| predicted protein [Populus trichocarpa]
gi|222850537|gb|EEE88084.1| predicted protein [Populus trichocarpa]
Length = 531
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D S T++VGGLD + ++DLR F +GEI S+K+ + FV + RE AE+A +L
Sbjct: 224 DESIKTLYVGGLDARINEQDLRDQFYAHGEIESIKMVPQRAIAFVTYTTREGAEKAAAEL 283
Query: 112 NGTVIGK 118
+ ++ K
Sbjct: 284 SNRLVIK 290
>gi|358383610|gb|EHK21274.1| hypothetical protein TRIVIDRAFT_116557, partial [Trichoderma virens
Gv29-8]
Length = 466
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 49 SEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANR 101
S+ D+SN IFVG L V D+ L Q FS +G ++ ++ +G GFV F +R
Sbjct: 159 SKEDTSNHFHIFVGDLSNEVNDDILLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDR 218
Query: 102 ENAEEALHKLNGTVIGKQSFRADYGNQ 128
+AE+AL ++G +G ++ R ++ NQ
Sbjct: 219 PDAEKALSSMDGEWLGSRAIRCNWANQ 245
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC-----GFVQFANRENAEEALHKLN 112
++VGGLD VT++ LRQ F G + +VKI K GFV++ + AE A+ LN
Sbjct: 79 LYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGYNYGFVEYDDPGAAERAMQTLN 138
Query: 113 GTVIGKQSFRADYGNQ 128
G + + R ++ Q
Sbjct: 139 GRRVHQSEIRVNWAYQ 154
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 34/71 (47%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TT +VG L P T D+ F +G + + +G F++ ENA A+ ++NG
Sbjct: 293 TTCYVGNLTPYTTPNDVVPLFQNFGFVVESRFQADRGFAFIKMDTHENAAMAICQMNGYN 352
Query: 116 IGKQSFRADYG 126
+ + + +G
Sbjct: 353 VNGRPLKCSWG 363
>gi|134077058|emb|CAK39931.1| unnamed protein product [Aspergillus niger]
Length = 497
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 55/121 (45%), Gaps = 16/121 (13%)
Query: 16 IGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQP 75
I A SG +S GG+ AP + + ++VGGLDP VT++ L+Q
Sbjct: 59 IPTAITSPMSGNMMSPTSAGGFVRRAAP--------EPNKRALYVGGLDPRVTEDILKQI 110
Query: 76 FSQYGEIASVKIPVGKGC--------GFVQFANRENAEEALHKLNGTVIGKQSFRADYGN 127
F G + SVKI K GFV+F + AE A+ LNG I + R ++
Sbjct: 111 FETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERAMQTLNGRRIHQSEIRVNWAY 170
Query: 128 Q 128
Q
Sbjct: 171 Q 171
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E S++ IFVG L V DE L Q FS +G ++ ++ +G GFV F R +
Sbjct: 178 EDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSD 237
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
A++AL ++G +G ++ R ++ NQ
Sbjct: 238 ADKALSSMDGEWLGSRAIRCNWANQ 262
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGGYASNGA------PGQGPQS---- 49
++ M+G + SR +R A + + S QQQ + G A P G QS
Sbjct: 242 LSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMV 301
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T DL F +G + ++ +G F++ ENA A
Sbjct: 302 VQQTPQWQTTCYVGNLTPYTTQTDLVPLFQNFGYVIETRLQADRGFAFIKMDTHENAAMA 361
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ +LNG + + + +G
Sbjct: 362 ICQLNGYNVNGRPLKCSWG 380
>gi|347839348|emb|CCD53920.1| similar to nuclear and cytoplasmic polyadenylated RNA-binding
protein pub1 [Botryotinia fuckeliana]
Length = 506
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E S++ IFVG L V DE L Q FS +G ++ ++ +G GF F R++
Sbjct: 178 EDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFAAFRERQD 237
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
AE+AL ++G +G ++ R ++ NQ
Sbjct: 238 AEKALSSMDGEWLGSRAIRCNWANQ 262
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 58/129 (44%), Gaps = 18/129 (13%)
Query: 10 SSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTD 69
++ P+ +P +G S GG+ AP + + ++VGGLDP VT+
Sbjct: 51 NTNPIPTAITSPMGENGGVMSPDSAGGFVRRAAP--------EPNKRALYVGGLDPRVTE 102
Query: 70 EDLRQPFSQYGEIASVKIPVGKGC----------GFVQFANRENAEEALHKLNGTVIGKQ 119
E LRQ F G + +VKI K GFV++ + AE A+ LNG + +
Sbjct: 103 EILRQIFETTGHVQNVKIIPDKNVGAVQSKGFNYGFVEYDDPGAAERAMQTLNGRRVHQA 162
Query: 120 SFRADYGNQ 128
R ++ Q
Sbjct: 163 EIRVNWAYQ 171
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGG------YASNGAPGQGPQS---- 49
++ M+G + SR +R A + + S QQQ S G + + P G QS
Sbjct: 242 LSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMSAMGMTPTTPFGHHHFPTHGVQSYDMI 301
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T +DL F +G + + +G FV+ + ENA A
Sbjct: 302 VQQTPQWQTTCYVGNLTPYTTQQDLVPLFQNFGYVVETRFQSDRGFAFVKMDSHENAALA 361
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ +L+G + + + +G
Sbjct: 362 ICQLSGYNVNGRPLKCSWG 380
>gi|62857699|ref|NP_001017228.1| cold-inducible RNA-binding protein [Xenopus (Silurana) tropicalis]
gi|123910273|sp|Q28IQ9.1|CIRBP_XENTR RecName: Full=Cold-inducible RNA-binding protein; AltName:
Full=Glycine-rich RNA-binding protein CIRP
gi|89268649|emb|CAJ83306.1| cold inducible RNA binding protein [Xenopus (Silurana) tropicalis]
Length = 166
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 6/73 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEALHKL 111
+FVGGL+ T+E L Q FS+YG++A V + +G GFV F N E+A++A+ +
Sbjct: 8 LFVGGLNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDAKDAMMAM 67
Query: 112 NGTVIGKQSFRAD 124
NG + + R D
Sbjct: 68 NGKSVDGRQIRVD 80
>gi|358254799|dbj|GAA56358.1| nucleolysin TIA-1 isoform p40 [Clonorchis sinensis]
Length = 508
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGL 63
MNG SR +R A R + + + A +SNTTI+VGG+
Sbjct: 97 MNGQILGSRAIRTNWAVRRDPADQAKDHRPLNYVEVFNA--------SSASNTTIYVGGI 148
Query: 64 DPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRA 123
+T+ L+ F ++GEI ++I KG F++F + A A+ ++G ++G QS +
Sbjct: 149 TSGLTELLLQNAFQEFGEIKEIRIFKEKGFSFIRFDSHAAATRAIVTMHGRLVGDQSCKC 208
Query: 124 DYGNQ 128
+G +
Sbjct: 209 SWGKE 213
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFV 96
P Q + + IFVG L P++ + L F+ +G + KI KG GFV
Sbjct: 23 PSSANQELSNDDSFHIFVGDLAPDIEGDVLLAAFNTFGNVTECKIIKDMHTQKPKGYGFV 82
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADYG 126
+ +RE AE A+ +NG ++G ++ R ++
Sbjct: 83 AYKSREEAERAIQVMNGQILGSRAIRTNWA 112
>gi|345497985|ref|XP_001603213.2| PREDICTED: nucleolysin TIA-1 isoform p40-like [Nasonia vitripennis]
Length = 386
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 65/127 (51%), Gaps = 11/127 (8%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSS--NTTIFVG 61
MNG + SR +R AT RK + + +N P + SS N T++ G
Sbjct: 121 MNGQWLGSRSIRTNWAT-RKPPAPKSE--------ANTKPLTFDEVYNQSSPTNCTVYCG 171
Query: 62 GLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSF 121
GL +T+E +++ FS +G I +++ KG F++F+ +E+A A+ ++ T I Q+
Sbjct: 172 GLTNGLTEELMQKTFSPFGSIQEIRVFKDKGYAFIRFSTKESATHAIVAVHNTDINGQTV 231
Query: 122 RADYGNQ 128
+ +G +
Sbjct: 232 KCSWGKE 238
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRE 102
S S + IFVG L P + + LR+ F+ +GEI+ ++ KG GFV F +
Sbjct: 53 SVNKSEHYHIFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTMKSKGYGFVSFVKKA 112
Query: 103 NAEEALHKLNGTVIGKQSFRADYGNQ 128
AE A+ +NG +G +S R ++ +
Sbjct: 113 EAESAIGAMNGQWLGSRSIRTNWATR 138
>gi|226500040|ref|NP_001150056.1| LOC100283683 [Zea mays]
gi|195636346|gb|ACG37641.1| nucleolysin TIAR [Zea mays]
Length = 421
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 8/136 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQG---PQSEGDSSN-- 55
+ ++NG + +R +R AT ++G ++Q SNG+ G P +G +N
Sbjct: 218 INDLNGKWLGNRQIRCNWATKGANAGEEKQILDTKVDLSNGSSESGKENPNDDGPENNPQ 277
Query: 56 -TTIFVGGLDPNVTDEDLRQPFSQYG--EIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
TT++VG L T D+ F G I V++ KG GFV+++ E A A+ N
Sbjct: 278 FTTVYVGNLPHEATMNDVHLFFHSLGAGSIEEVRVTRDKGFGFVRYSTHEEAALAIQMGN 337
Query: 113 GTVIGKQSFRADYGNQ 128
G +IG + + +G++
Sbjct: 338 GQLIGGRQIKCSWGSK 353
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E S + IFVG L P VTD L FS Y + ++ +G GFV F N+++
Sbjct: 154 EDTSGHFNIFVGDLCPEVTDATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQD 213
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQWSGAYYGGQVYD 140
A+ A++ LNG +G + R ++ + + A Q+ D
Sbjct: 214 AQSAINDLNGKWLGNRQIRCNWATKGANAGEEKQILD 250
>gi|224106319|ref|XP_002314127.1| predicted protein [Populus trichocarpa]
gi|222850535|gb|EEE88082.1| predicted protein [Populus trichocarpa]
Length = 531
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D S T++VGGLD + ++DLR F +GEI S+K+ + FV + RE AE+A +L
Sbjct: 224 DESIKTLYVGGLDARINEQDLRDQFYAHGEIESIKMVPQRAIAFVTYTTREGAEKAAAEL 283
Query: 112 NGTVIGK 118
+ ++ K
Sbjct: 284 SNRLVIK 290
>gi|256075299|ref|XP_002573957.1| rna binding motif protein [Schistosoma mansoni]
gi|360044844|emb|CCD82392.1| putative rna binding motif protein [Schistosoma mansoni]
Length = 425
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D + TT+++GG+ +T++DLR F Q+GE+ SV + + C F+QFA R AE A +
Sbjct: 244 DRTITTLYIGGIPDGMTEKDLRNHFYQFGELRSVNLHAKQHCAFIQFATRGAAERAAERT 303
Query: 112 -NGTVIGKQSFRADYGN 127
+ ++G ++G
Sbjct: 304 YDRLILGGHRLTVNWGK 320
>gi|190344618|gb|EDK36327.2| hypothetical protein PGUG_00425 [Meyerozyma guilliermondii ATCC
6260]
Length = 450
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 8/133 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAAT------PRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSS 54
+TE NG+ SR +R+G A P + + + +S P S D +
Sbjct: 240 LTEANGMVVGSRAIRVGMAAGSNKPQPVTNIVHSDRLASPAIEEEVKLPKHARFS--DPT 297
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N TI V GL VT+E+L S +GEI + G+V+F NR++AE A+ + G
Sbjct: 298 NNTIVVHGLSGKVTEEELALHLSSFGEILYCTLSSDFDSGYVKFYNRQDAETAIFFMYGQ 357
Query: 115 VIGKQSFRADYGN 127
+I + +G+
Sbjct: 358 IINDCRIQVSWGH 370
Score = 38.9 bits (89), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 56/115 (48%), Gaps = 12/115 (10%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G+ P S ++ +S+G + ++ +++ +IFVG L +V++ L + F
Sbjct: 145 GSPIPNSSKHFKLNIASRGKNTATDIQ----RNSKPANDFSIFVGDLAMDVSEPILYEAF 200
Query: 77 SQY--GEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSFRA 123
+ ++ VKI + KG GFV+F + +AL + NG V+G ++ R
Sbjct: 201 NSLFPDQVKQVKIMMDNSTRASKGFGFVRFFDANTQAKALTEANGMVVGSRAIRV 255
>gi|452821583|gb|EME28612.1| U2-associated protein SR14 isoform 1 [Galdieria sulphuraria]
Length = 610
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV---------GKGCGFV 96
G GD T IF+G L+P+ T+E L + F ++G + S+KI G GFV
Sbjct: 129 GSHDSGDPLTTNIFLGNLNPSTTEETLLRTFGRFGPVGSIKIMYPRTPEEHLRGYNSGFV 188
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADYG 126
F R++AE AL L GT++ R +G
Sbjct: 189 SFMERDDAEAALEALQGTLLDGFLVRLAWG 218
>gi|169768824|ref|XP_001818882.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus oryzae RIB40]
gi|238498168|ref|XP_002380319.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus flavus NRRL3357]
gi|83766740|dbj|BAE56880.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220693593|gb|EED49938.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus flavus NRRL3357]
gi|391874569|gb|EIT83434.1| RRM domain protein [Aspergillus oryzae 3.042]
Length = 477
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E S++ IFVG L V DE L+Q FS +G ++ ++ +G GFV F +R +
Sbjct: 177 EDTSNHFHIFVGDLSNEVNDEILQQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRAD 236
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
A++AL ++G +G ++ R ++ NQ
Sbjct: 237 ADKALGSMDGEWLGSRAIRCNWANQ 261
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 54/121 (44%), Gaps = 16/121 (13%)
Query: 16 IGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQP 75
I A SG +S GGY AP + + ++VGGLD VT++ L+Q
Sbjct: 58 IPTAITSPMSGNMMSPTSAGGYVRRAAP--------EPNKRALYVGGLDQRVTEDILKQI 109
Query: 76 FSQYGEIASVKIPVGKGC--------GFVQFANRENAEEALHKLNGTVIGKQSFRADYGN 127
F G + SVKI K GFV+F + AE A+ LNG I + R ++
Sbjct: 110 FETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERAMQTLNGRRIHQSEIRVNWAY 169
Query: 128 Q 128
Q
Sbjct: 170 Q 170
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGGYASNGA------PGQGPQS---- 49
+ M+G + SR +R A + + S QQQ + G A P G QS
Sbjct: 241 LGSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMV 300
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T DL F +G + ++ +G F++ + ENA A
Sbjct: 301 VQQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVLETRLQADRGFAFIKMDSHENAAMA 360
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ +LNG + + + +G
Sbjct: 361 ICQLNGYNVNGRPLKCSWG 379
>gi|346319566|gb|EGX89167.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Cordyceps militaris CM01]
Length = 450
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E S + IFVG L V DE L Q FS +G ++ ++ +G GFV F +R
Sbjct: 154 EDTSGHFHIFVGDLSNEVNDEILTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPE 213
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
AE+AL ++G +G ++ R ++ NQ
Sbjct: 214 AEKALSSMDGEWLGSRAIRCNWANQ 238
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 36 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC-- 93
G S +PG +S + + ++VGGLD VT++ LRQ F G + +VKI K
Sbjct: 50 GVMSPTSPGGFRRSAPEPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKG 109
Query: 94 ---GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV++ + AE A+ LNG + + R ++ Q
Sbjct: 110 FNYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQ 147
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 35/71 (49%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TT++VG L P T D+ F +G + + +G F++ ENA A+ ++NG
Sbjct: 286 TTVYVGNLTPYTTPNDVVPLFQNFGFVVESRFQADRGFAFIKMDTHENASMAICQMNGYN 345
Query: 116 IGKQSFRADYG 126
+ + + +G
Sbjct: 346 VNGRPLKCSWG 356
>gi|449454582|ref|XP_004145033.1| PREDICTED: flowering time control protein FPA-like [Cucumis
sativus]
Length = 999
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIG 117
++VGG+ P V+ E L + FS++G+I K + FV++ E+A +AL +NG IG
Sbjct: 102 LWVGGISPAVSREQLEEEFSKFGKIDEFKFLRDRNTAFVEYVRLEDASQALRMMNGKRIG 161
Query: 118 KQSFRADY 125
+ R D+
Sbjct: 162 GEQLRVDF 169
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
+++VG L VTD DL F+Q+G I SV + F+ F + E+A+ A L G +
Sbjct: 24 SLWVGNLSMEVTDGDLMNLFAQFGGIDSVTSYPSRSYAFIFFKHMEDAQAAKEALQGYFL 83
Query: 117 GKQSFRADYG-------NQWSG 131
S + ++ N W G
Sbjct: 84 RGNSIKIEFARPAKPCRNLWVG 105
>gi|350291093|gb|EGZ72307.1| hypothetical protein NEUTE2DRAFT_144798 [Neurospora tetrasperma
FGSC 2509]
Length = 490
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E S + IFVG L V DE L Q FS +G ++ ++ +G GFV F +R +
Sbjct: 185 EDTSGHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPD 244
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
AE+AL ++G +G ++ R ++ NQ
Sbjct: 245 AEKALSSMDGEWLGSRAIRCNWANQ 269
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 15/86 (17%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKI-------------PVGKG--CGFVQFANRE 102
++VGGLDP VT++ LRQ F G + +VKI P KG GFV++ +
Sbjct: 93 LYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNVGKPGSEQPRQKGYNYGFVEYDDPG 152
Query: 103 NAEEALHKLNGTVIGKQSFRADYGNQ 128
AE A+ LNG + + R ++ Q
Sbjct: 153 AAERAMQTLNGRRVHQSEIRVNWAYQ 178
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TT +VG L P T DL F +G + + +G F++ ENA A+ +LNG
Sbjct: 317 TTCYVGNLTPYTTQNDLVPLFQNFGYVVESRFQADRGFAFIKMDTHENAAMAICQLNGYQ 376
Query: 116 IGKQSFRADYG 126
+ + + +G
Sbjct: 377 VNGRPLKCSWG 387
>gi|359489218|ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232913 [Vitis vinifera]
gi|297734640|emb|CBI16691.3| unnamed protein product [Vitis vinifera]
Length = 812
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 7/69 (10%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 111
+FVGGLD + T++DLR+ FSQ GE+ V++ + KG F++FA E A+ A+ +L
Sbjct: 234 VFVGGLDKDATEDDLRKVFSQVGEVTEVRLMMNPQTKKNKGFAFLRFATVEQAKRAVTEL 293
Query: 112 NGTVI-GKQ 119
V+ GKQ
Sbjct: 294 KNPVVNGKQ 302
>gi|194224457|ref|XP_001500563.2| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Equus
caballus]
Length = 612
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 21/129 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSN----T 56
+ +MNG+ S R + +G A R G N + ++ D N
Sbjct: 248 VMDMNGMQVSGRLLYVGRAQKR-------------GERQNELKRRFEHTKQDRLNRCQGV 294
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV----GKGCGFVQFANRENAEEALHKLN 112
++V LD ++ DE LR+ FS YG I S K+ KG GFV F++ E A +A+ ++N
Sbjct: 295 NLYVKNLDDSIDDEKLRKEFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMN 354
Query: 113 GTVIGKQSF 121
G +IG +
Sbjct: 355 GRIIGTKPL 363
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 24/121 (19%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
++ MNG+ + R + +G R+ ++ + G A+ + T I+V
Sbjct: 155 ISTMNGMLLNDRKVFVGHFKSRR-----EREAELGARAT--------------AFTNIYV 195
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEALHKLNGTV 115
L +V + L+ FSQ+G++ SVK+ +G GFV F E A++A+ +NG
Sbjct: 196 KNLPGHVDERGLQDLFSQFGKMLSVKVMRDDSGHSRGFGFVNFEKHEEAQKAVMDMNGMQ 255
Query: 116 I 116
+
Sbjct: 256 V 256
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV----GKGCGFVQFANRENAEEALHKLNG 113
+F+ L+ ++ ++ L FS +G I S K+ +G GFV F E A++A+ +NG
Sbjct: 101 VFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDDHGSRGFGFVHFETHEAAQQAISTMNG 160
Query: 114 TVIGKQS 120
++ +
Sbjct: 161 MLLNDRK 167
Score = 38.9 bits (89), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEALHK 110
+++VG L P+VT+ L + FS G I S+++ G ++ F +AE AL
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 111 LNGTVIGKQSFRADYGNQWSGAYYGG 136
+N VI Q R + + G G
Sbjct: 72 MNFEVIKGQPIRIMWSQRDPGLRKSG 97
>gi|164424152|ref|XP_962723.2| hypothetical protein NCU07874 [Neurospora crassa OR74A]
gi|157070397|gb|EAA33487.2| hypothetical protein NCU07874 [Neurospora crassa OR74A]
Length = 480
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E S + IFVG L V DE L Q FS +G ++ ++ +G GFV F +R +
Sbjct: 175 EDTSGHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPD 234
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
AE+AL ++G +G ++ R ++ NQ
Sbjct: 235 AEKALSSMDGEWLGSRAIRCNWANQ 259
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK-----GCGFVQFANRENAEEALHKLN 112
++VGGLDP VT++ LRQ F G + +VKI K GFV++ + AE A+ LN
Sbjct: 93 LYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNQKGYNYGFVEYDDPGAAERAMQTLN 152
Query: 113 GTVIGKQSFRADYGNQ 128
G + + R ++ Q
Sbjct: 153 GRRVHQSEIRVNWAYQ 168
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TT +VG L P T DL F +G + + +G F++ ENA A+ +LNG
Sbjct: 307 TTCYVGNLTPYTTQNDLVPLFQNFGYVVESRFQADRGFAFIKMDTHENAAMAICQLNGYQ 366
Query: 116 IGKQSFRADYG 126
+ + + +G
Sbjct: 367 VNGRPLKCSWG 377
>gi|449471899|ref|XP_004153439.1| PREDICTED: flowering time control protein FPA-like [Cucumis
sativus]
Length = 1000
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIG 117
++VGG+ P V+ E L + FS++G+I K + FV++ E+A +AL +NG IG
Sbjct: 102 LWVGGISPAVSREQLEEEFSKFGKIDEFKFLRDRNTAFVEYVRLEDASQALRMMNGKRIG 161
Query: 118 KQSFRADY 125
+ R D+
Sbjct: 162 GEQLRVDF 169
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 7/84 (8%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
+ +++VG L VTD DL F+Q+G I SV + F+ F + E+A+ A L G
Sbjct: 22 SNSLWVGNLSMEVTDGDLMNLFAQFGGIDSVTSYPSRSYAFIFFKHMEDAQAAKEALQGY 81
Query: 115 VIGKQSFRADYG-------NQWSG 131
+ S + ++ N W G
Sbjct: 82 FLRGNSIKIEFARPAKPCRNLWVG 105
>gi|449506038|ref|XP_002188262.2| PREDICTED: nucleolysin TIAR [Taeniopygia guttata]
Length = 453
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 285 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 344
Query: 115 VIGKQSFRADYGNQ 128
I + +G +
Sbjct: 345 TIEGHVVKCYWGKE 358
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 162 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 221
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV F N+ +AE A+ + G +G + R ++ +
Sbjct: 222 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR 256
>gi|336271351|ref|XP_003350434.1| hypothetical protein SMAC_02147 [Sordaria macrospora k-hell]
gi|380090956|emb|CCC11489.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 495
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E S + IFVG L V DE L Q FS +G ++ ++ +G GFV F +R +
Sbjct: 190 EDTSGHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPD 249
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
AE+AL ++G +G ++ R ++ NQ
Sbjct: 250 AEKALSSMDGEWLGSRAIRCNWANQ 274
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 20/91 (21%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC--------------------GFVQ 97
++VGGLDP VT++ LRQ F G + +VKI K GFV+
Sbjct: 93 LYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNVGKPGSPEQPHDAQQQKGYNYGFVE 152
Query: 98 FANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
+ + AE A+ LNG + + R ++ Q
Sbjct: 153 YDDPGAAERAMQTLNGRRVHQSEIRVNWAYQ 183
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TT +VG L P T DL F +G + + +G F++ ENA A+ +LNG
Sbjct: 322 TTCYVGNLTPYTTQNDLVPLFQNFGYVVESRFQADRGFAFIKMDTHENAAMAICQLNGYQ 381
Query: 116 IGKQSFRADYG 126
+ + + +G
Sbjct: 382 VNGRPLKCSWG 392
>gi|452821584|gb|EME28613.1| U2-associated protein SR14 isoform 2 [Galdieria sulphuraria]
Length = 605
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV---------GKGCGFV 96
G GD T IF+G L+P+ T+E L + F ++G + S+KI G GFV
Sbjct: 124 GSHDSGDPLTTNIFLGNLNPSTTEETLLRTFGRFGPVGSIKIMYPRTPEEHLRGYNSGFV 183
Query: 97 QFANRENAEEALHKLNGTVIGKQSFRADYG 126
F R++AE AL L GT++ R +G
Sbjct: 184 SFMERDDAEAALEALQGTLLDGFLVRLAWG 213
>gi|418747760|ref|ZP_13304055.1| hypothetical protein LEP1GSC178_2276 [Leptospira licerasiae str.
MMD4847]
gi|404276610|gb|EJZ43921.1| hypothetical protein LEP1GSC178_2276 [Leptospira licerasiae str.
MMD4847]
Length = 85
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 42/70 (60%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N +FVG L+ +V +++ FS YGE+A K+ GKG GFV+ A+ E AE A + LNGT
Sbjct: 3 NRKLFVGNLNYSVRQQEISDLFSNYGEVAYAKVIEGKGFGFVEMASEEQAENAKNSLNGT 62
Query: 115 VIGKQSFRAD 124
++ D
Sbjct: 63 EFKGRTLNID 72
>gi|384498314|gb|EIE88805.1| hypothetical protein RO3G_13516 [Rhizopus delemar RA 99-880]
Length = 199
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 6/104 (5%)
Query: 31 YSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI--- 87
Y + +A + Q E + + IFVG L P +T+E L Q FS +G ++ +
Sbjct: 50 YEIRANWAQPSSSVQQTIKEDTTHHFHIFVGDLAPEITNETLAQAFSVFGTMSEAHVMWD 109
Query: 88 PV---GKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
P+ +G GFV F ++ +AE+A+ +NG +G + R ++ Q
Sbjct: 110 PMSGKSRGFGFVAFRDKADAEKAIATMNGEWLGSRPVRCNWATQ 153
>gi|387593127|gb|EIJ88151.1| hypothetical protein NEQG_01595 [Nematocida parisii ERTm3]
gi|387596161|gb|EIJ93783.1| hypothetical protein NEPG_01355 [Nematocida parisii ERTm1]
Length = 316
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 10/93 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHK 110
TIF+ GL+ + T+EDLR+ F ++G+I V+IP GKG G+V+F +E E++ +
Sbjct: 91 TIFIKGLNFSATEEDLRELFGKFGDIVEVRIPRSRDGPGGKGFGYVEFETKEACEKS-RE 149
Query: 111 LNGTVIGKQSFRADYGN--QWSGAYYGGQ-VYD 140
LNGT +S D Q GA GQ VY+
Sbjct: 150 LNGTDFNGRSIVVDLARSGQRVGAGADGQKVYN 182
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 41 GAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP----VGKGCGFV 96
GA GQ ++ D S T+F+G + +V ED Y E++ V+IP G+ GF
Sbjct: 174 GADGQKVYNKTDDS--TVFLGNIPFDVDHEDFLSHLKTYAEVSQVRIPEDRETGRPKGFA 231
Query: 97 QFANRENAEEALHKLNGTVI 116
FA+ E+ EEA +N ++
Sbjct: 232 -FASCESVEEAQKLINSNIV 250
>gi|159164088|pdb|2DGO|A Chain A, Solution Structure Of The Rna Binding Domain In Cytotoxic
Granule-Associated Rna Binding Protein 1
gi|211938969|pdb|2RNE|A Chain A, Solution Structure Of The Second Rna Recognition Motif
(Rrm) Of Tia-1
Length = 115
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 41 GAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCG 94
G+ G Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG G
Sbjct: 1 GSSGSSGQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYG 60
Query: 95 FVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
FV F N+ +AE A+ ++ G +G + R ++ +
Sbjct: 61 FVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATR 94
>gi|66821693|ref|XP_644288.1| hypothetical protein DDB_G0274995 [Dictyostelium discoideum AX4]
gi|60472437|gb|EAL70390.1| hypothetical protein DDB_G0274995 [Dictyostelium discoideum AX4]
Length = 1104
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 44/75 (58%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
+S + I++G + N+ ++++R+ +YGEI S++I K C FV F N NA AL L
Sbjct: 1007 NSISRAIYIGNVSDNLPEKEIRKECEKYGEIESIRILRKKACAFVNFMNIPNATAALQTL 1066
Query: 112 NGTVIGKQSFRADYG 126
NG +G R +YG
Sbjct: 1067 NGKKLGDTIVRVNYG 1081
Score = 42.7 bits (99), Expect = 0.053, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ E + ++VG + +V+++DL+ F +GE+ SV+I K C FV F + A A
Sbjct: 906 EDEDHLPSRVLWVGNIGMDVSEDDLKYEFGSFGELESVRILHNKYCAFVNFKDTNEAINA 965
Query: 108 LHKLNGTVIGKQSFRADYGNQWSGAYYGG 136
++ V+G Q ++ + S + G
Sbjct: 966 KKGMHNQVLGSQYIVVNFRHPKSDDFING 994
>gi|345324102|ref|XP_001514793.2| PREDICTED: nucleolysin TIAR-like [Ornithorhynchus anatinus]
Length = 452
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 5/128 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ M G + R +R AT + + Q +S Q N T++
Sbjct: 235 IVHMGGQWLGGRQIRTNWATRKPPAPKSTQENSTKQLRFEDVVNQS-----SPKNCTVYC 289
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT I
Sbjct: 290 GGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHV 349
Query: 121 FRADYGNQ 128
+ +G +
Sbjct: 350 VKCYWGKE 357
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 161 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 220
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV F N+ +AE A+ + G +G + R ++ +
Sbjct: 221 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR 255
>gi|320585953|gb|EFW98632.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Grosmannia clavigera kw1407]
Length = 488
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E S + IFVG L V DE L Q F+ +G ++ ++ +G GFV F +R +
Sbjct: 171 EDTSGHFHIFVGDLSNEVNDEVLTQAFTSFGSVSEARVMWDMKTGRSRGYGFVAFRDRPD 230
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
AE+AL ++G +G ++ R ++ NQ
Sbjct: 231 AEKALSSMDGEWLGSRAIRCNWANQ 255
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC-----GFVQFAN 100
G +S + + ++VGGLD VT++ LRQ F G + +VKI K GFV++ +
Sbjct: 77 GRRSAPEPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGYNYGFVEYDD 136
Query: 101 RENAEEALHKLNGTVIGKQSFRADYGNQ 128
AE A+ LNG + + R ++ Q
Sbjct: 137 PGAAERAMQNLNGRRVHQSEIRVNWAYQ 164
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGG------YASNGAPGQGPQS---- 49
++ M+G + SR +R A + + S QQQ Q G + + P QG S
Sbjct: 235 LSSMDGEWLGSRAIRCNWANQKGQPSMAQQQALQQVGMTPTTPFGHHHFPTQGINSYEMV 294
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ + TT +VG L P T DL F +G + + +G F++ + ENA A
Sbjct: 295 INQTPAWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVESRFQSDRGFAFIKLDSHENAAMA 354
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ +LNG + + + +G
Sbjct: 355 ICQLNGYNVNGRPLKCSWG 373
>gi|413954516|gb|AFW87165.1| hypothetical protein ZEAMMB73_979278 [Zea mays]
gi|414865260|tpg|DAA43817.1| TPA: hypothetical protein ZEAMMB73_808082 [Zea mays]
Length = 643
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 50/84 (59%), Gaps = 6/84 (7%)
Query: 44 GQGPQSEGDSSN-TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQ 97
G+G ++ D N +++ +D + DE L++ F ++G++AS K+ V KG GFV
Sbjct: 299 GRGRDNKVDKPNGINLYLKNIDDGINDEGLKKLFEEFGQVASCKVMVDARGRSKGSGFVS 358
Query: 98 FANRENAEEALHKLNGTVIGKQSF 121
FA E + A++++NG ++GK+
Sbjct: 359 FATAEAGQRAINRMNGRIVGKKPL 382
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 12/93 (12%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEA 107
S +FV L+PN+ ++L + FS +G I S K+ KG GFVQ+ E+AE A
Sbjct: 120 SGRANLFVKNLEPNIDSKNLYEIFSSFGAILSCKVATDSAGQSKGYGFVQYETEESAEAA 179
Query: 108 LHKLNGTV-------IGKQSFRADYGNQWSGAY 133
++ LNG + +G R D +++ Y
Sbjct: 180 INGLNGMLANNRKMFVGLHMRRRDREVKFTNVY 212
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANRENAEEALHK 110
T +++ L +++DLRQ F+ +GEI S + K GFV F E A EA+ K
Sbjct: 209 TNVYIKNLPTEFSEDDLRQEFAPFGEITSAVVMRDADGASKCFGFVNFKKPEFAIEAVEK 268
Query: 111 LNGTVIGKQSF 121
NG IG ++
Sbjct: 269 ANGKAIGDKTL 279
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEA 107
S +++VG L V + L FSQ +A+V++ V G G+V F +R+ A A
Sbjct: 33 SMASLYVGDLAETVDEPQLHALFSQVAPVATVRVCRDILSGVSLGYGYVNFYSRQEATRA 92
Query: 108 LHKLNGTVIGKQSFRADYGNQ 128
L LN T + + R + N+
Sbjct: 93 LEALNFTPLIGKYIRVMFSNR 113
>gi|218192545|gb|EEC74972.1| hypothetical protein OsI_11001 [Oryza sativa Indica Group]
Length = 647
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANREN 103
+ D T +++ LD ++T+E ++ FSQYG + SVKI KG GFV F N E+
Sbjct: 209 TNNDDKYTNLYMKNLDDDITEELIKLKFSQYGLVISVKIMKRDDGTSKGFGFVSFQNPES 268
Query: 104 AEEALHKLNGTVIGKQSF 121
A+ A +NG ++G ++
Sbjct: 269 AKRAKESMNGMLLGSKTL 286
Score = 42.4 bits (98), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANRENAEEALHKLN 112
+FV L+ V + L++ F ++G+I S K+ +G GFVQFA +E+A+ ++ LN
Sbjct: 128 VFVKNLNDLVDNVSLQELFCKFGDILSCKVAKNEDGTSRGYGFVQFALQESADASIQNLN 187
Query: 113 GT-VIGKQSFRADY 125
+ G+Q A +
Sbjct: 188 NSHFCGRQLHVATF 201
Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 54/117 (46%), Gaps = 14/117 (11%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGL 63
MNG+ S+ + + A Q+ + + Y + + S+ + +++ +
Sbjct: 276 MNGMLLGSKTLYVARA---------QKKAERKQYLQCLHEEKRNEIITKSNGSNVYIKNI 326
Query: 64 DPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANRENAEEALHKLNGTV 115
+ V D+ LR+ F+++G I S KI + KG GFV + E A+ A+ + G +
Sbjct: 327 NDEVGDDALRERFNEFGNITSAKIMRDEKGISKGFGFVCYNTPEEAKCAVSNMRGVM 383
>gi|121701611|ref|XP_001269070.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus clavatus NRRL 1]
gi|119397213|gb|EAW07644.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus clavatus NRRL 1]
Length = 480
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 55/121 (45%), Gaps = 16/121 (13%)
Query: 16 IGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQP 75
I A SG +S GGY AP + + ++VGGLDP VT++ L+Q
Sbjct: 60 IPTAITSPMSGNMMSPTSAGGYVRRAAP--------EPNKRALYVGGLDPRVTEDILKQI 111
Query: 76 FSQYGEIASVKIPVGKGC--------GFVQFANRENAEEALHKLNGTVIGKQSFRADYGN 127
F G + SVK+ K GFV+F + AE A+ LNG I + R ++
Sbjct: 112 FETTGHVQSVKVIPDKNKFNSKGYNYGFVEFDDPGAAERAMQTLNGRRIHQSEIRVNWAY 171
Query: 128 Q 128
Q
Sbjct: 172 Q 172
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E S + IFVG L V DE L Q FS +G ++ ++ +G GFV F +R +
Sbjct: 179 EDTSGHFHIFVGDLSNEVNDEILMQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRGD 238
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
A++AL+ ++G +G ++ R ++ NQ
Sbjct: 239 ADKALNSMDGEWLGSRAIRCNWANQ 263
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 59/139 (42%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGG------YASNGAPGQGPQS---- 49
+ M+G + SR +R A + + S QQQ + G + + P G QS
Sbjct: 243 LNSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMV 302
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P DL F +G + ++ +G F++ ENA A
Sbjct: 303 VQQTPQWQTTCYVGNLTPYTAQNDLVPLFQNFGYVLETRLQADRGFAFIKMDTHENAAMA 362
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ +LNG + + + +G
Sbjct: 363 ICQLNGYNVNGRPLKCSWG 381
>gi|449489106|ref|XP_002195780.2| PREDICTED: splicing factor, proline- and glutamine-rich
[Taeniopygia guttata]
Length = 648
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%)
Query: 31 YSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG 90
+ + G+ +N + + P + + +FVG L ++TDED ++ F++YGE V I G
Sbjct: 213 WRRRQGFKANLSLLRRPGEKTYTQRCRLFVGNLPADITDEDFKRLFAKYGEPGEVFINKG 272
Query: 91 KGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
KG GF++ +R AE A +L+ T + + R +
Sbjct: 273 KGFGFIKLESRALAEIAKAELDDTPMRGRQLRVRFATH 310
>gi|410354759|gb|JAA43983.1| RNA binding protein, fox-1 homolog 2 [Pan troglodytes]
Length = 366
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 27/136 (19%)
Query: 31 YSSQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
+++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 83 LTTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEI 142
Query: 88 PVG----KGCGFVQFANRENAEEALHKLNGTVIGKQSFRAD---------------YGNQ 128
KG GFV F N +A+ A KL+GTV+ + + Y N
Sbjct: 143 IFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANG 202
Query: 129 WS-----GAYYGGQVY 139
W GA YG ++Y
Sbjct: 203 WKLSPVVGAVYGPELY 218
>gi|336469273|gb|EGO57435.1| hypothetical protein NEUTE1DRAFT_129383 [Neurospora tetrasperma
FGSC 2508]
Length = 494
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E S + IFVG L V DE L Q FS +G ++ ++ +G GFV F +R +
Sbjct: 189 EDTSGHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPD 248
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
AE+AL ++G +G ++ R ++ NQ
Sbjct: 249 AEKALSSMDGEWLGSRAIRCNWANQ 273
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 19/90 (21%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC-------------------GFVQF 98
++VGGLDP VT++ LRQ F G + +VKI K GFV++
Sbjct: 93 LYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNVGKPGSEQPRDEKQQKGYNYGFVEY 152
Query: 99 ANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
+ AE A+ LNG + + R ++ Q
Sbjct: 153 DDPGAAERAMQTLNGRRVHQSEIRVNWAYQ 182
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TT +VG L P T DL F +G + + +G F++ ENA A+ +LNG
Sbjct: 321 TTCYVGNLTPYTTQNDLVPLFQNFGYVVESRFQADRGFAFIKMDTHENAAMAICQLNGYQ 380
Query: 116 IGKQSFRADYG 126
+ + + +G
Sbjct: 381 VNGRPLKCSWG 391
>gi|307136258|gb|ADN34086.1| RNA-binding protein [Cucumis melo subsp. melo]
Length = 916
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIG 117
++VGG+ P V+ E L + FS++G+I K + FV++ E+A +AL +NG IG
Sbjct: 7 LWVGGISPAVSREQLEEEFSKFGKIDEFKFLRDRNTAFVEYVRLEDASQALRMMNGKRIG 66
Query: 118 KQSFRADY 125
+ R D+
Sbjct: 67 GEQLRVDF 74
>gi|133925801|ref|NP_001076046.1| RNA binding protein fox-1 homolog 2 isoform 4 [Homo sapiens]
Length = 370
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 27/136 (19%)
Query: 31 YSSQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
+++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 83 LTTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEI 142
Query: 88 PVG----KGCGFVQFANRENAEEALHKLNGTVIGKQSFRAD---------------YGNQ 128
KG GFV F N +A+ A KL+GTV+ + + Y N
Sbjct: 143 IFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANG 202
Query: 129 WS-----GAYYGGQVY 139
W GA YG ++Y
Sbjct: 203 WKLSPVVGAVYGPELY 218
>gi|126330354|ref|XP_001380561.1| PREDICTED: splicing factor, proline- and glutamine-rich-like
[Monodelphis domestica]
Length = 700
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 54/101 (53%)
Query: 28 QQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
+++ S G+ +N + + P + + +FVG L ++TDED ++ F++YGE V I
Sbjct: 263 EEKISDSEGFKANLSLLRRPGEKTYTQRCRLFVGNLPADITDEDFKRLFAKYGEPGEVFI 322
Query: 88 PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GKG GF++ +R AE A +L+ T + + R +
Sbjct: 323 NKGKGFGFIKLESRALAEIAKAELDDTPMRGRQLRVRFATH 363
>gi|115452253|ref|NP_001049727.1| Os03g0278500 [Oryza sativa Japonica Group]
gi|108707490|gb|ABF95285.1| polyadenylate binding protein, types 1, 2, 3, 4 family protein,
expressed [Oryza sativa Japonica Group]
gi|113548198|dbj|BAF11641.1| Os03g0278500 [Oryza sativa Japonica Group]
gi|215678518|dbj|BAG92173.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222624669|gb|EEE58801.1| hypothetical protein OsJ_10348 [Oryza sativa Japonica Group]
Length = 647
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANREN 103
+ D T +++ LD ++T+E ++ FSQYG + SVKI KG GFV F N E+
Sbjct: 209 TNNDDKYTNLYMKNLDDDITEELIKLKFSQYGLVISVKIMKRDDGTSKGFGFVSFQNPES 268
Query: 104 AEEALHKLNGTVIGKQSF 121
A+ A +NG ++G ++
Sbjct: 269 AKRAKESMNGMLLGSKTL 286
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANRENAEEALHKLN 112
+FV L+ V + L++ F ++G+I S K+ +G GFVQFA +E+A+ ++ LN
Sbjct: 128 VFVKNLNDLVDNVSLQELFCKFGDILSCKVAKNEDGTSRGYGFVQFALQESADASIQNLN 187
Query: 113 GT-VIGKQSFRADY 125
+ G+Q A +
Sbjct: 188 NSHFCGRQLHVATF 201
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 54/117 (46%), Gaps = 14/117 (11%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGL 63
MNG+ S+ + + A Q+ + + Y + + S+ + +++ +
Sbjct: 276 MNGMLLGSKTLYVARA---------QKKAERKQYLQRLHEEKRNEIITKSNGSNVYIKNI 326
Query: 64 DPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANRENAEEALHKLNGTV 115
+ V D+ LR+ F+++G I S KI + KG GFV + E A+ A+ + G +
Sbjct: 327 NDEVGDDALRERFNEFGNITSAKIMRDEKGISKGFGFVCYNTPEEAKCAVSNMRGVM 383
>gi|401422974|ref|XP_003875974.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492214|emb|CBZ27488.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 696
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 111
+FV GL +V D++L + F ++GEI S K+ + +G FV+F N ENAE A+ L
Sbjct: 235 LFVCGLPVSVRDKELLELFEKHGEIESAKVMLDIHTGRSRGIAFVKFKNVENAENAVDAL 294
Query: 112 NGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIP 147
NGT + N + G + +P
Sbjct: 295 NGTTVNGHQITVRVANSRAAYLPGNPTNKTFVRNVP 330
>gi|4680340|gb|AAD27631.1|AF128457_5 putative nucleolysin [Oryza sativa Indica Group]
Length = 391
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 69/138 (50%), Gaps = 10/138 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY--ASNGAPGQGPQS------EGD 52
+ E+NG + +R +R AT ++G ++Q + G +NG+ G + E +
Sbjct: 172 INELNGKWLGNRQVRCNWATKGANAGEEKQNTDSKGMIELTNGSSEGGKDNANEDGPENN 231
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYG--EIASVKIPVGKGCGFVQFANRENAEEALHK 110
TT++VG L +V D+ + F G I V++ KG GFV+++ E A A+
Sbjct: 232 PQYTTVYVGNLPHDVNSNDVHRFFHSLGVGSIEEVRVTRDKGFGFVRYSTHEEAALAIQT 291
Query: 111 LNGTVIGKQSFRADYGNQ 128
NG +IG + + +G++
Sbjct: 292 GNGQLIGGRQIKCSWGSK 309
Score = 35.8 bits (81), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 31/53 (58%)
Query: 91 KGCGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYG 143
+G GFV F N+++A+ A+++LNG +G + R ++ + + A Q D G
Sbjct: 155 RGFGFVSFRNQQDAQNAINELNGKWLGNRQVRCNWATKGANAGEEKQNTDSKG 207
>gi|383863609|ref|XP_003707272.1| PREDICTED: nucleolysin TIAR-like [Megachile rotundata]
Length = 392
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Query: 40 NGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 92
N A G Q + D+SN IFVG L P + + L++ F+ +GEI++ +I KG
Sbjct: 79 NWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTMKSKG 138
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSFRADY 125
FV F + AE A+ +NG +G +S R ++
Sbjct: 139 YAFVSFVKKSEAEAAIAAMNGQWLGSRSIRTNW 171
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 5/126 (3%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG-QGPQSEGDSSNTTIFVGG 62
MNG + SR +R +T + S + +++N P + ++ +N T++ GG
Sbjct: 157 MNGQWLGSRSIRTNWSTRKPPP----PRSERPRHSNNSKPNYEEVYNQSSPTNCTVYCGG 212
Query: 63 LDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
+TDE + + FS +G I +++ KG F++F +E A A+ + T I +
Sbjct: 213 FTNGITDELINKTFSPFGTIQDIRVFKDKGYAFIKFTTKEAATHAIESTHNTEINGSIVK 272
Query: 123 ADYGNQ 128
+G +
Sbjct: 273 CFWGKE 278
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 108
+S+ T++VG LD +V++E L FSQ G + KI P FV+F N + A AL
Sbjct: 4 ESNPRTLYVGNLDSSVSEELLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQCAATAL 63
Query: 109 HKLNGTVIGKQSFRADY----GNQ 128
+N + + ++ GNQ
Sbjct: 64 AAMNKRSFLNKEMKVNWATSPGNQ 87
>gi|387017378|gb|AFJ50807.1| Nucleolysin TIA-1 isoform p40 [Crotalus adamanteus]
Length = 392
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 70/149 (46%), Gaps = 7/149 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S ++ SN T++
Sbjct: 164 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNAKQLSY----DDVVNQSSPSNCTVYC 218
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NGT I
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHV 278
Query: 121 FRADYGNQWSGAYYGGQVYDGYGYAIPPP 149
+ +G + Q + GY PPP
Sbjct: 279 VKCYWGKETPDMINPIQQQNQVGY--PPP 305
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 111
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 112 NGTVIGKQSFRADYGNQ 128
G +G + R ++ +
Sbjct: 168 GGQWLGGRQIRTNWATR 184
>gi|293337013|ref|NP_001169661.1| uncharacterized protein LOC100383542 [Zea mays]
gi|224030689|gb|ACN34420.1| unknown [Zea mays]
Length = 442
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 50/82 (60%), Gaps = 6/82 (7%)
Query: 44 GQGPQSEGDSSN-TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQ 97
G+G ++ D N +++ +D + DE L++ F ++G++AS K+ V KG GFV
Sbjct: 266 GRGRDNKVDKPNGINLYLKNIDDGINDEGLKKLFEEFGQVASCKVMVDARGRSKGSGFVS 325
Query: 98 FANRENAEEALHKLNGTVIGKQ 119
FA E + A++++NG ++GK+
Sbjct: 326 FATAEAGQRAINRMNGRIVGKK 347
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 12/93 (12%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEA 107
S +FV L+PN+ ++L + FS +G I S K+ KG GFVQ+ E+AE A
Sbjct: 87 SGRANLFVKNLEPNIDSKNLYEIFSSFGAILSCKVATDSAGQSKGYGFVQYETEESAEAA 146
Query: 108 LHKLNGTV-------IGKQSFRADYGNQWSGAY 133
++ LNG + +G R D +++ Y
Sbjct: 147 INGLNGMLANNRKMFVGLHMRRRDREVKFTNVY 179
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANRENAEEALHK 110
T +++ L +++DLRQ F+ +GEI S + K GFV F E A EA+ K
Sbjct: 176 TNVYIKNLPTEFSEDDLRQEFAPFGEITSAVVMRDADGASKCFGFVNFKKPEFAIEAVEK 235
Query: 111 LNGTVIGKQSF 121
NG IG ++
Sbjct: 236 ANGKAIGDKTL 246
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHK 110
+++VG L V + L FSQ +A+V++ V G G+V F +R+ A AL
Sbjct: 3 SLYVGDLAETVDEPQLHALFSQVAPVATVRVCRDILSGVSLGYGYVNFYSRQEATRALEA 62
Query: 111 LNGTVIGKQSFRADYGNQ 128
LN T + + R + N+
Sbjct: 63 LNFTPLIGKYIRVMFSNR 80
>gi|126273035|ref|XP_001367894.1| PREDICTED: nucleolysin TIAR isoform 2 [Monodelphis domestica]
Length = 371
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 5/128 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ M G + R +R AT + + Q +S Q N T++
Sbjct: 154 IVHMGGQWLGGRQIRTNWATRKPPAPKSTQENSTKQLRFEDVVNQS-----SPKNCTVYC 208
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT I
Sbjct: 209 GGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHV 268
Query: 121 FRADYGNQ 128
+ +G +
Sbjct: 269 VKCYWGKE 276
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 80 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 139
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV F N+ +AE A+ + G +G + R ++ +
Sbjct: 140 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR 174
>gi|253683353|dbj|BAH84828.1| TIA-1-related RNA binding protein [Spodoptera frugiperda]
Length = 283
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 40 NGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 92
N A G Q + D+SN IFVG L P + LR F+ +GEI++ +I KG
Sbjct: 79 NWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILRDAFAPFGEISNCRIVRDPQTLKSKG 138
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
FV F + +AE A+ +NG +G +S R ++ +
Sbjct: 139 YAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTR 174
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 64/131 (48%), Gaps = 13/131 (9%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQ-----SEGDSSNTTI 58
MNG + SR +R +T + S ++G +S A + P ++ +NTT+
Sbjct: 157 MNGQWLGSRSIRTNWSTRKPPSK-----PNEGAPSSKRA--KQPTFDEVYNQSSPTNTTV 209
Query: 59 FVGGLDPNVTDEDLRQ-PFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIG 117
+ GG NV EDL Q FSQ+G+I V++ KG F++F +E A A+ + T I
Sbjct: 210 YCGGFTSNVITEDLMQNTFSQFGQIQDVRVFRDKGYAFIRFTTKEAAAHAIEATHNTEIS 269
Query: 118 KQSFRADYGNQ 128
+ +G +
Sbjct: 270 GHIVKCFWGKE 280
>gi|346319705|gb|EGX89306.1| negative regulator of differentiation 1 [Cordyceps militaris CM01]
Length = 868
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIG 117
++VG LD T+E LRQ FS+YGEI V K C FV F N NA +A+ + G
Sbjct: 589 VYVGNLDETWTEERLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAIRGRDDY 648
Query: 118 KQSFRADYGNQWSG 131
K+ F+ ++G G
Sbjct: 649 KK-FKVNFGKDRCG 661
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
Q G S N +++G L +VTD ++R+ ++G I +VK+ K F+ + + NA +A
Sbjct: 356 QQSGASRN--VYLGNLPEDVTDAEIREDLGKFGPIDTVKLVREKSIAFIHYLSIANAIKA 413
Query: 108 LHKL 111
+ +L
Sbjct: 414 VTQL 417
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 9/97 (9%)
Query: 26 GYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASV 85
G+ Q S Q G + P GP G S T+++G + P+ T E++ + G+I SV
Sbjct: 246 GFNMQQSMQPG---SPVPMNGPAPSGTSR--TVYLGNIPPDTTAEEILG-HVRSGQIESV 299
Query: 86 KIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
++ K C F+ F +A A H + ++ K +
Sbjct: 300 RLLPDKNCAFISFL---DASSATHFHSDAILKKLCIK 333
>gi|110756942|ref|XP_395357.3| PREDICTED: nucleolysin TIAR [Apis mellifera]
gi|340713958|ref|XP_003395500.1| PREDICTED: nucleolysin TIAR-like [Bombus terrestris]
gi|350421173|ref|XP_003492759.1| PREDICTED: nucleolysin TIAR-like [Bombus impatiens]
gi|380025693|ref|XP_003696603.1| PREDICTED: nucleolysin TIAR-like [Apis florea]
Length = 392
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Query: 40 NGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 92
N A G Q + D+SN IFVG L P + + L++ F+ +GEI++ +I KG
Sbjct: 79 NWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTMKSKG 138
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSFRADY 125
FV F + AE A+ +NG +G +S R ++
Sbjct: 139 YAFVSFVKKSEAEAAIAAMNGQWLGSRSIRTNW 171
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 60/126 (47%), Gaps = 5/126 (3%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG-QGPQSEGDSSNTTIFVGG 62
MNG + SR +R +T + S + +++N P + ++ +N T++ GG
Sbjct: 157 MNGQWLGSRSIRTNWSTRKPPP----PRSERPRHSNNSKPNYEEVYNQSSPTNCTVYCGG 212
Query: 63 LDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSFR 122
+TD+ + + FS +G I +++ KG F++F +E A A+ + T I +
Sbjct: 213 FTNGITDDLITKTFSPFGTIQDIRVFKDKGYAFIKFTTKEAATHAIESTHNTEINGSIVK 272
Query: 123 ADYGNQ 128
+G +
Sbjct: 273 CFWGKE 278
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 108
+S+ T++VG LD +V++E L FSQ G + KI P FV+F N + A AL
Sbjct: 4 ESNPRTLYVGNLDTSVSEELLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQCAATAL 63
Query: 109 HKLNGTVIGKQSFRADY----GNQ 128
+N + + ++ GNQ
Sbjct: 64 AAMNKRSFLNKEMKVNWATSPGNQ 87
>gi|118344182|ref|NP_001071914.1| zinc finger protein [Ciona intestinalis]
gi|92081514|dbj|BAE93304.1| zinc finger protein [Ciona intestinalis]
Length = 413
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D + TT+++GGL V +EDLR F YGEI S+ + + FVQF R +AE A +
Sbjct: 231 DQTITTLYIGGLGEAVNEEDLRDQFYHYGEIRSIHMATNQNYAFVQFTKRSDAETAAKRT 290
Query: 112 NGTVIGK 118
G ++ K
Sbjct: 291 AGRLMIK 297
>gi|426223384|ref|XP_004005855.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Ovis aries]
Length = 375
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S ++ SN T++
Sbjct: 153 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VNQSSPSNCTVYC 207
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NGT I
Sbjct: 208 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHV 267
Query: 121 FRADYGNQ 128
+ +G +
Sbjct: 268 VKCYWGKE 275
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG
Sbjct: 79 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGY 138
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV F N+ +AE A+ ++ G +G + R ++ +
Sbjct: 139 GFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATR 173
>gi|189208127|ref|XP_001940397.1| nucleolysin TIA-1 isoform p40 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976490|gb|EDU43116.1| nucleolysin TIA-1 isoform p40 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 470
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRE 102
+E S++ IFVG L V DE L Q FS +G ++ ++ +G GFV F +R
Sbjct: 158 NEDTSNHFHIFVGDLSNEVNDEVLLQAFSTFGPVSEARVMWDMKTGRSRGYGFVAFRDRA 217
Query: 103 NAEEALHKLNGTVIGKQSFRADYGNQ 128
+A+ AL ++G +G ++ R ++ NQ
Sbjct: 218 DADRALSSMDGEWLGSRAIRCNWANQ 243
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 13/91 (14%)
Query: 39 SNGAPGQGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC---- 93
++G PG P+ N ++VGGLDP VT++ LRQ F G + SVKI K
Sbjct: 65 TSGQPGYVPRRAAPEPNKRALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTASSPS 124
Query: 94 --------GFVQFANRENAEEALHKLNGTVI 116
GFV++ + AE + LNG I
Sbjct: 125 FNSKGFNYGFVEYDDPGAAERGMATLNGRRI 155
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR--KSSGYQQQYSSQG-----GYASNGAPGQGPQS---- 49
++ M+G + SR +R A + S QQ +S G + + P G QS
Sbjct: 223 LSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMASMGMTPTTPFGHHHFPTHGVQSYDMV 282
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ + TT +VG L P + DL F +G + + +G F++ ENA A
Sbjct: 283 VAQTPAWQTTCYVGNLTPYTSQSDLVPLFQNFGYVTETRFQSDRGFAFIKMDTHENAAMA 342
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ +LNG + + + +G
Sbjct: 343 ICQLNGYNVNGRPLKCSWG 361
>gi|359688053|ref|ZP_09258054.1| RNA recognition motif-containing protein [Leptospira licerasiae
serovar Varillal str. MMD0835]
gi|418758172|ref|ZP_13314356.1| hypothetical protein LEP1GSC185_3619 [Leptospira licerasiae serovar
Varillal str. VAR 010]
gi|384114879|gb|EIE01140.1| hypothetical protein LEP1GSC185_3619 [Leptospira licerasiae serovar
Varillal str. VAR 010]
Length = 107
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 109
E N +FVG L+ +V +++ FS YGE+A K+ GKG GFV+ A+ E AE A +
Sbjct: 20 EESMQNRKLFVGNLNYSVRQQEISDLFSNYGEVAYAKVIEGKGFGFVEMASEEQAENAKN 79
Query: 110 KLNGTVIGKQSFRAD 124
LNGT ++ D
Sbjct: 80 SLNGTEFKGRTLNID 94
>gi|126273037|ref|XP_001367935.1| PREDICTED: nucleolysin TIAR isoform 3 [Monodelphis domestica]
Length = 385
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 5/128 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ M G + R +R AT + + Q +S Q N T++
Sbjct: 168 IVHMGGQWLGGRQIRTNWATRKPPAPKSTQENSTKQLRFEDVVNQS-----SPKNCTVYC 222
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT I
Sbjct: 223 GGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHV 282
Query: 121 FRADYGNQ 128
+ +G +
Sbjct: 283 VKCYWGKE 290
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAE 105
D + +FVG L P +T ED++ F+ +G+I+ ++ KG GFV F N+ +AE
Sbjct: 106 DQDHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAE 165
Query: 106 EALHKLNGTVIGKQSFRADYGNQ 128
A+ + G +G + R ++ +
Sbjct: 166 NAIVHMGGQWLGGRQIRTNWATR 188
>gi|326924063|ref|XP_003208252.1| PREDICTED: LOW QUALITY PROTEIN: nucleolysin TIAR-like [Meleagris
gallopavo]
Length = 382
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 214 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 273
Query: 115 VIGKQSFRADYGNQ 128
I + +G +
Sbjct: 274 TIEGHVVKCYWGKE 287
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 91 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 150
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFR 122
GFV F N+ +AE A+ + G +G + R
Sbjct: 151 GFVSFYNKLDAENAIVHMGGQWLGGRQIR 179
>gi|225444661|ref|XP_002276983.1| PREDICTED: nucleolysin TIAR isoform 1 [Vitis vinifera]
Length = 429
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 26/183 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYA---SNGAPGQ---GPQSEGDSS 54
+ ++NG + SR +R AT + + G + + +S +NG G+ G Q+ D S
Sbjct: 197 INDLNGRWLGSRQIRCNWAT-KGAGGNEDKPNSDAKSVVELTNGTSGEVIYGIQNGKDKS 255
Query: 55 N----------TTIFVGGLDPNVTDEDLRQPFSQY--GEIASVKIPVGKGCGFVQFANRE 102
N TT++VG L P VT DL + F G I V++ KG GFV+++
Sbjct: 256 NDEAPENNLQYTTVYVGNLAPEVTSVDLHRHFHALGAGAIEDVRVQRDKGFGFVRYSTHA 315
Query: 103 NAEEALHKLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAY 162
A A+ N ++ + + +G++ + A +PPP P M +AA +
Sbjct: 316 EAALAIQMGNARILCGKPIKCSWGSKPTPAGTSST-------PLPPPAAPHMPGISAADF 368
Query: 163 GAY 165
AY
Sbjct: 369 AAY 371
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANR 101
Q E S + IFVG L P VTD L FS Y + ++ +G GFV F N+
Sbjct: 131 QREDTSGHYNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQ 190
Query: 102 ENAEEALHKLNGTVIGKQSFRADYGNQWSG 131
+ A+ A++ LNG +G + R ++ + +G
Sbjct: 191 QEAQSAINDLNGRWLGSRQIRCNWATKGAG 220
Score = 39.3 bits (90), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 8/129 (6%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC--GFVQFANR 101
G P S+ +++VG + P VT+ L++ FS G + K+ + GFV + +R
Sbjct: 42 GNLPPGFDSSTCRSVYVGNIHPQVTEPLLQEVFSSTGPLEGCKLIRKEKSSYGFVDYFDR 101
Query: 102 ENAEEALHKLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAA 161
+A ++ LNG + Q + ++ AY Q D G+ D S A
Sbjct: 102 RSAALSIVTLNGRHLFGQPIKVNW------AYASSQREDTSGHYNIFVGDLSPEVTDATL 155
Query: 162 YGAYPVYGS 170
+ + VY S
Sbjct: 156 FACFSVYPS 164
>gi|410965631|ref|XP_003989347.1| PREDICTED: RNA binding protein fox-1 homolog 2 [Felis catus]
Length = 411
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 27/135 (20%)
Query: 32 SSQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP 88
+++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 105 TTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEII 164
Query: 89 VG----KGCGFVQFANRENAEEALHKLNGTVIGKQSFRAD---------------YGNQW 129
KG GFV F N +A+ A KL+GTV+ + + Y N W
Sbjct: 165 FNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGW 224
Query: 130 S-----GAYYGGQVY 139
GA YG ++Y
Sbjct: 225 KLSPVVGAVYGPELY 239
>gi|315052490|ref|XP_003175619.1| differentiation 1 negative regulator [Arthroderma gypseum CBS
118893]
gi|311340934|gb|EFR00137.1| differentiation 1 negative regulator [Arthroderma gypseum CBS
118893]
Length = 839
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 18/131 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
++ M G+ +R ++IG G S G P + ++ +++
Sbjct: 469 LSNMQGLMIHNRRLKIG-----------------WGKHSGGLPTAISLAVSGGASRNVYI 511
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G LD T+E LRQ FS YGEI V K C FV F N NA +A+ + G+ K+
Sbjct: 512 GNLDETWTEERLRQDFSAYGEIELVNTLREKSCAFVNFTNIANAIKAIEGMRGSEDYKR- 570
Query: 121 FRADYGNQWSG 131
F+ ++G G
Sbjct: 571 FKINFGKDRCG 581
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 41 GAPGQGPQS-----EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGF 95
G P Q P S + ++ +++G L +VT+E+LR+ ++G I +VK+ K GF
Sbjct: 262 GKPSQVPTSVALAVQQSHASRNVYLGNLHEDVTEEELREELGKFGPIDTVKLVKEKSIGF 321
Query: 96 VQFANRENAEEALHKL 111
V F + NA +A+ +L
Sbjct: 322 VHFLSISNAIKAVTQL 337
>gi|268533576|ref|XP_002631916.1| Hypothetical protein CBG07904 [Caenorhabditis briggsae]
Length = 411
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 61/134 (45%), Gaps = 25/134 (18%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ MNG R MR+ A +SQ PG + E S + +FV
Sbjct: 92 LQAMNGRSLLDREMRVNWAVD----------ASQ--------PGDSRKQET-SRHFHVFV 132
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEALHKLNGT 114
G L V LR+ F +G+++ KI KG GFV + RE+AE A+ ++NG
Sbjct: 133 GDLSSEVDSTKLREAFLAFGDVSEAKIIRDTATNKAKGYGFVSYPRREDAERAIEQMNGQ 192
Query: 115 VIGKQSFRADYGNQ 128
+G+++ R ++ +
Sbjct: 193 WLGRRTIRTNWATR 206
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP---VGKGCGFVQFANRENAEEALHKLNG 113
T+FVG LDP +TDE L F+Q G + K+ + F++F + A +AL +NG
Sbjct: 38 TLFVGNLDPAITDEFLATLFNQIGAVTKAKVCFDGMNDPFAFIEFGDHNQAGQALQAMNG 97
Query: 114 TVIGKQSFRADYG 126
+ + R ++
Sbjct: 98 RSLLDREMRVNWA 110
>gi|448519256|ref|XP_003868046.1| hypothetical protein CORT_0B09070 [Candida orthopsilosis Co 90-125]
gi|380352385|emb|CCG22611.1| hypothetical protein CORT_0B09070 [Candida orthopsilosis]
Length = 185
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 13/101 (12%)
Query: 28 QQQYSSQGGYA----SNGAPG-QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEI 82
QQQY S+G A SNGA Q P + + +FVG L P+ TD+ LR F +Y +
Sbjct: 64 QQQYQSKGSAAITSSSNGATSTQEP--SWNPKHFRLFVGNLGPDATDDLLRGAFGKYSSM 121
Query: 83 ASVKIPVG------KGCGFVQFANRENAEEALHKLNGTVIG 117
++V +P+ KG GFV F+N ++ +A +NG IG
Sbjct: 122 SNVHVPIDKHTKKPKGYGFVAFSNADDYLQAFKDMNGKYIG 162
>gi|303668381|gb|ADM16300.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 121
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEE 106
S +FVGGL + T+E L + F++YG IA V + K G GFV++ N E+A++
Sbjct: 2 SDEGKLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKD 61
Query: 107 ALHKLNGTVIGKQSFRAD 124
AL +NG + ++ R D
Sbjct: 62 ALDGMNGKSVDGRTIRVD 79
>gi|330933733|ref|XP_003304275.1| hypothetical protein PTT_16807 [Pyrenophora teres f. teres 0-1]
gi|311319203|gb|EFQ87630.1| hypothetical protein PTT_16807 [Pyrenophora teres f. teres 0-1]
Length = 485
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANREN 103
E S++ IFVG L V DE L Q FS +G ++ ++ +G GFV F +R +
Sbjct: 174 EDTSNHFHIFVGDLSNEVNDEVLLQAFSTFGPVSEARVMWDMKTGRSRGYGFVAFRDRAD 233
Query: 104 AEEALHKLNGTVIGKQSFRADYGNQ 128
A+ AL ++G +G ++ R ++ NQ
Sbjct: 234 ADRALSSMDGEWLGSRAIRCNWANQ 258
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 13/103 (12%)
Query: 39 SNGAPGQGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC---- 93
++G PG P+ N ++VGGLDP VT++ LRQ F G + SVKI K
Sbjct: 65 TSGQPGYVPRRAAPEPNKRALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTASSPS 124
Query: 94 --------GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV++ + AE + LNG I R ++ Q
Sbjct: 125 FNSKGFNYGFVEYDDPGAAERGMATLNGRRIHNNEIRVNWAYQ 167
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR--KSSGYQQQYSSQG-----GYASNGAPGQGPQS---- 49
++ M+G + SR +R A + S QQ +S G + + P G QS
Sbjct: 238 LSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMASMGMTPTTPFGHHHFPTHGVQSYDMV 297
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ + TT +VG L P + DL F +G + + +G F++ ENA A
Sbjct: 298 VSQTPAWQTTCYVGNLTPYTSQSDLVPLFQNFGYVTETRFQSDRGFAFIKMDTHENAAMA 357
Query: 108 LHKLNGTVIGKQSFRADYG 126
+ +LNG + + + +G
Sbjct: 358 ICQLNGYNVNGRPLKCSWG 376
>gi|341823643|dbj|BAK53481.1| RBFOX2 [Homo sapiens]
Length = 391
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 27/136 (19%)
Query: 31 YSSQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
+++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 83 LTTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEI 142
Query: 88 PVG----KGCGFVQFANRENAEEALHKLNGTVIGKQSFRAD---------------YGNQ 128
KG GFV F N +A+ A KL+GTV+ + + Y N
Sbjct: 143 IFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANG 202
Query: 129 WS-----GAYYGGQVY 139
W GA YG ++Y
Sbjct: 203 WKLSPVVGAVYGPELY 218
>gi|115486297|ref|NP_001068292.1| Os11g0620100 [Oryza sativa Japonica Group]
gi|77551976|gb|ABA94773.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113645514|dbj|BAF28655.1| Os11g0620100 [Oryza sativa Japonica Group]
gi|215767783|dbj|BAH00012.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218186124|gb|EEC68551.1| hypothetical protein OsI_36864 [Oryza sativa Indica Group]
gi|222616351|gb|EEE52483.1| hypothetical protein OsJ_34666 [Oryza sativa Japonica Group]
Length = 441
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 69/138 (50%), Gaps = 10/138 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY--ASNGAPGQGPQS------EGD 52
+ E+NG + +R +R AT ++G ++Q + G +NG+ G + E +
Sbjct: 222 INELNGKWLGNRQVRCNWATKGANAGEEKQNTDSKGMIELTNGSSEGGKDNANEDGPENN 281
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYG--EIASVKIPVGKGCGFVQFANRENAEEALHK 110
TT++VG L +V D+ + F G I V++ KG GFV+++ E A A+
Sbjct: 282 PQYTTVYVGNLPHDVNSNDVHRFFHSLGVGSIEEVRVTRDKGFGFVRYSTHEEAALAIQT 341
Query: 111 LNGTVIGKQSFRADYGNQ 128
NG +IG + + +G++
Sbjct: 342 GNGQLIGGRQIKCSWGSK 359
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANR 101
Q E S + IFVG L P VTD L F+ + + ++ +G GFV F N+
Sbjct: 156 QREDTSGHFNIFVGDLCPEVTDAALFAFFAGFTSCSDARVMWDQKTGRSRGFGFVSFRNQ 215
Query: 102 ENAEEALHKLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYG 143
++A+ A+++LNG +G + R ++ + + A Q D G
Sbjct: 216 QDAQNAINELNGKWLGNRQVRCNWATKGANAGEEKQNTDSKG 257
>gi|58865762|ref|NP_001012096.1| TIA1 cytotoxic granule-associated RNA binding protein [Rattus
norvegicus]
gi|56268852|gb|AAH87064.1| TIA1 cytotoxic granule-associated RNA binding protein [Rattus
norvegicus]
gi|149036619|gb|EDL91237.1| rCG56007, isoform CRA_c [Rattus norvegicus]
Length = 375
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S S+ N T++
Sbjct: 153 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VSQSSPGNCTVYC 207
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG F++F++ E+A A+ +NGT I
Sbjct: 208 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFIRFSSHESAAHAIVSVNGTTIEGHV 267
Query: 121 FRADYGNQ 128
+ +G +
Sbjct: 268 VKCYWGKE 275
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG
Sbjct: 79 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGY 138
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV F N+ +AE A+ ++ G +G + R ++ +
Sbjct: 139 GFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATR 173
>gi|351710501|gb|EHB13420.1| Nucleolysin TIAR [Heterocephalus glaber]
Length = 392
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 21/115 (18%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 221 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 280
Query: 115 VI---------GKQS-------FRADYGN--QWSGAYYGGQVYDGY---GYAIPP 148
I GK+S + DY QW Y Q Y Y G+ +PP
Sbjct: 281 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWGQVYGNPQQYGQYMANGWQVPP 335
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 98 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 157
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV F N+ +AE A+ + G +G + R ++ +
Sbjct: 158 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR 192
>gi|344283909|ref|XP_003413713.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Loxodonta
africana]
Length = 375
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S ++ SN T++
Sbjct: 153 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VNQSSPSNCTVYC 207
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NGT I
Sbjct: 208 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHV 267
Query: 121 FRADYGNQ 128
+ +G +
Sbjct: 268 VKCYWGKE 275
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG
Sbjct: 79 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGY 138
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV F N+ +AE A+ ++ G +G + R ++ +
Sbjct: 139 GFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATR 173
>gi|108864589|gb|ABG22554.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 403
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 69/138 (50%), Gaps = 10/138 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY--ASNGAPGQGPQS------EGD 52
+ E+NG + +R +R AT ++G ++Q + G +NG+ G + E +
Sbjct: 184 INELNGKWLGNRQVRCNWATKGANAGEEKQNTDSKGMIELTNGSSEGGKDNANEDGPENN 243
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYG--EIASVKIPVGKGCGFVQFANRENAEEALHK 110
TT++VG L +V D+ + F G I V++ KG GFV+++ E A A+
Sbjct: 244 PQYTTVYVGNLPHDVNSNDVHRFFHSLGVGSIEEVRVTRDKGFGFVRYSTHEEAALAIQT 303
Query: 111 LNGTVIGKQSFRADYGNQ 128
NG +IG + + +G++
Sbjct: 304 GNGQLIGGRQIKCSWGSK 321
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANR 101
Q E S + IFVG L P VTD L F+ + + ++ +G GFV F N+
Sbjct: 118 QREDTSGHFNIFVGDLCPEVTDAALFAFFAGFTSCSDARVMWDQKTGRSRGFGFVSFRNQ 177
Query: 102 ENAEEALHKLNGTVIGKQSFRADYGNQ 128
++A+ A+++LNG +G + R ++ +
Sbjct: 178 QDAQNAINELNGKWLGNRQVRCNWATK 204
>gi|449282273|gb|EMC89133.1| Nucleolysin TIAR, partial [Columba livia]
Length = 378
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 210 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 269
Query: 115 VIGKQSFRADYGNQ 128
I + +G +
Sbjct: 270 TIEGHVVKCYWGKE 283
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 87 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 146
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV F N+ +AE A+ + G +G + R ++ +
Sbjct: 147 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR 181
>gi|301758210|ref|XP_002914948.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 2 [Ailuropoda
melanoleuca]
gi|410954993|ref|XP_003984143.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Felis catus]
Length = 375
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S ++ SN T++
Sbjct: 153 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VNQSSPSNCTVYC 207
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NGT I
Sbjct: 208 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHV 267
Query: 121 FRADYGNQ 128
+ +G +
Sbjct: 268 VKCYWGKE 275
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG
Sbjct: 79 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGY 138
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV F N+ +AE A+ ++ G +G + R ++ +
Sbjct: 139 GFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATR 173
>gi|348507121|ref|XP_003441105.1| PREDICTED: nucleolysin TIAR [Oreochromis niloticus]
Length = 382
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L+P +T ED+R F+ +G+I+ ++ KG
Sbjct: 80 NWATTPSSQKKDTSNHFHVFVGDLNPEITTEDVRVAFAPFGKISDARVVKDMTTGKSKGY 139
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV F N+ +AE A+ ++G +G + R ++ +
Sbjct: 140 GFVSFYNKLDAENAIINMSGQWLGGRQIRTNWATR 174
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 45/74 (60%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +++ +RQ FS +G+I V++ KG F++F++ ++A A+ +NGT
Sbjct: 203 NCTVYCGGIQSGLSEHLMRQTFSPFGQIMEVRVFPEKGYSFIRFSSHDSAAHAIVSVNGT 262
Query: 115 VIGKQSFRADYGNQ 128
VI + +G +
Sbjct: 263 VIEGHVVKCFWGKE 276
>gi|291386623|ref|XP_002709696.1| PREDICTED: TIA1 cytotoxic granule-associated RNA binding
protein-like [Oryctolagus cuniculus]
Length = 386
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S ++ SN T++
Sbjct: 164 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VNQSSPSNCTVYC 218
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NGT I
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHV 278
Query: 121 FRADYGNQ 128
+ +G +
Sbjct: 279 VKCYWGKE 286
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG
Sbjct: 90 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGY 149
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV F N+ +AE A+ ++ G +G + R ++ +
Sbjct: 150 GFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATR 184
>gi|281346697|gb|EFB22281.1| hypothetical protein PANDA_002889 [Ailuropoda melanoleuca]
Length = 377
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S ++ SN T++
Sbjct: 155 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VNQSSPSNCTVYC 209
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NGT I
Sbjct: 210 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHV 269
Query: 121 FRADYGNQ 128
+ +G +
Sbjct: 270 VKCYWGKE 277
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 111
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 99 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 158
Query: 112 NGTVIGKQSFRADYGNQ 128
G +G + R ++ +
Sbjct: 159 GGQWLGGRQIRTNWATR 175
>gi|302495851|ref|XP_003009939.1| RNA-binding protein [Arthroderma benhamiae CBS 112371]
gi|291173461|gb|EFE29294.1| RNA-binding protein [Arthroderma benhamiae CBS 112371]
Length = 837
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 18/131 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
++ M G+ +R ++IG G S G P + ++ +++
Sbjct: 467 LSNMQGLMIHNRRLKIG-----------------WGKHSGGLPTAISLAVSGGASRNVYI 509
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G LD T+E LRQ FS YGEI V K C FV F N NA +A+ + G+ K+
Sbjct: 510 GNLDETWTEERLRQDFSAYGEIELVNTLREKSCAFVNFTNIANAIKAIEGMRGSEDYKR- 568
Query: 121 FRADYGNQWSG 131
F+ ++G G
Sbjct: 569 FKINFGKDRCG 579
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 41 GAPGQGPQS-----EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGF 95
G P Q P S + ++ +++G L +VT+E+LR+ ++G I +VK+ K GF
Sbjct: 260 GKPSQVPTSVALAVQQSHASRNVYLGNLHEDVTEEELREELGKFGPIDTVKLVKEKSIGF 319
Query: 96 VQFANRENAEEALHKL 111
V F + NA +A+ +L
Sbjct: 320 VHFLSISNAIKAVTQL 335
>gi|126273033|ref|XP_001367857.1| PREDICTED: nucleolysin TIAR isoform 1 [Monodelphis domestica]
Length = 388
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 220 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 279
Query: 115 VIGKQSFRADYGNQ 128
I + +G +
Sbjct: 280 TIEGHVVKCYWGKE 293
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 97 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 156
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSFRADYGNQ 128
GFV F N+ +AE A+ + G +G + R ++ +
Sbjct: 157 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR 191
>gi|321249350|ref|XP_003191429.1| single-stranded DNA binding protein [Cryptococcus gattii WM276]
gi|317457896|gb|ADV19642.1| single-stranded DNA binding protein, putative [Cryptococcus gattii
WM276]
Length = 442
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 67/130 (51%), Gaps = 18/130 (13%)
Query: 3 EMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGG 62
E +G R +R+ AT RK + + + + N Q P +E T+++G
Sbjct: 253 EKDGSEIDGRAIRVNYATQRKPN----EAAEKRAKVFNDK--QSPPAE------TLWIGS 300
Query: 63 LDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEALHKLNGTVI 116
L +VT++ + + F Q+G++ SV++P KG G+VQF++ E+A AL +NG I
Sbjct: 301 LSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVEDASAALKAMNGAEI 360
Query: 117 GKQSFRADYG 126
++ R D+
Sbjct: 361 AGRAIRVDFA 370
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAE 105
+ + T +FVG L NV ++ L+ F GE+ S ++ +G G+V+FA+ E +
Sbjct: 190 EEATTNVFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLEASA 249
Query: 106 EALHKLNGTVIGKQSFRADYGNQ 128
+A+ K +G+ I ++ R +Y Q
Sbjct: 250 KAIEK-DGSEIDGRAIRVNYATQ 271
>gi|344250807|gb|EGW06911.1| Nucleolysin TIA-1 [Cricetulus griseus]
Length = 387
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
S+ SN T++ GG+ +T++ +RQ FS +G+I +++ KG F++F + E+A A+
Sbjct: 207 SQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQILEIRVFPDKGYSFIRFNSHESAAHAI 266
Query: 109 HKLNGTVIGKQSFRADYGNQ 128
+NGT I + +G +
Sbjct: 267 VSVNGTTIEGHVVKCYWGKE 286
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 111
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 112 NGTVIGKQSFRADYGNQ 128
G +G + R ++ +
Sbjct: 168 GGQWLGGRQIRTNWATR 184
>gi|326474591|gb|EGD98600.1| nrd1 [Trichophyton tonsurans CBS 112818]
Length = 837
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 18/131 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
++ M G+ +R ++IG G S G P + ++ +++
Sbjct: 467 LSNMQGLMIHNRRLKIG-----------------WGKHSGGLPTAISLAVSGGASRNVYI 509
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G LD T+E LRQ FS YGEI V K C FV F N NA +A+ + G+ K+
Sbjct: 510 GNLDETWTEERLRQDFSAYGEIELVNTLREKSCAFVNFTNIANAIKAIEGMRGSEDYKR- 568
Query: 121 FRADYGNQWSG 131
F+ ++G G
Sbjct: 569 FKINFGKDRCG 579
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 41 GAPGQGPQS-----EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGF 95
G P Q P S + ++ +++G L +VT+E+LR+ ++G I +VK+ K GF
Sbjct: 260 GKPSQVPTSVVLAVQQSHASRNVYLGNLHEDVTEEELREELGKFGPIDTVKLVKEKSIGF 319
Query: 96 VQFANRENAEEALHKL 111
V F + NA +A+ +L
Sbjct: 320 VHFLSISNAIKAVTQL 335
>gi|426223382|ref|XP_004005854.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Ovis aries]
gi|440907815|gb|ELR57912.1| Nucleolysin TIA-1 isoform p40 [Bos grunniens mutus]
Length = 386
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S ++ SN T++
Sbjct: 164 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VNQSSPSNCTVYC 218
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NGT I
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHV 278
Query: 121 FRADYGNQ 128
+ +G +
Sbjct: 279 VKCYWGKE 286
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 111
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 112 NGTVIGKQSFRADYGNQ 128
G +G + R ++ +
Sbjct: 168 GGQWLGGRQIRTNWATR 184
>gi|357156104|ref|XP_003577343.1| PREDICTED: nucleolysin TIAR-like [Brachypodium distachyon]
Length = 451
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 69/138 (50%), Gaps = 10/138 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYAS--NGAPGQGPQS------EGD 52
+ E+NG + +R +R AT ++G ++Q + G NG+ G ++ E +
Sbjct: 220 INELNGKWLGNRQIRCNWATKGANAGEEKQNTDSKGMVELINGSSEAGKENANEDGPENN 279
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYG--EIASVKIPVGKGCGFVQFANRENAEEALHK 110
TT++VG L ++ D+ + F G I V++ KG GFV+++ E A A+
Sbjct: 280 PQYTTVYVGNLPHDINSNDVHRFFHLLGAGSIEEVRVTRDKGFGFVRYSTHEEAALAIQT 339
Query: 111 LNGTVIGKQSFRADYGNQ 128
NG ++G + + +G++
Sbjct: 340 GNGQLVGGRQIKCSWGSK 357
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANR 101
Q E S + IFVG L P VTD L FS Y + ++ +G GFV F N+
Sbjct: 154 QREDTSGHFNIFVGDLCPEVTDAALFAFFSAYSTCSDARVMWDQKTGRSRGFGFVSFRNQ 213
Query: 102 ENAEEALHKLNGTVIGKQSFRADYGNQWSGAYYGGQVYDGYG 143
++A+ A+++LNG +G + R ++ + + A Q D G
Sbjct: 214 QDAQTAINELNGKWLGNRQIRCNWATKGANAGEEKQNTDSKG 255
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.312 0.131 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,279,417,278
Number of Sequences: 23463169
Number of extensions: 147193449
Number of successful extensions: 385981
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5368
Number of HSP's successfully gapped in prelim test: 17675
Number of HSP's that attempted gapping in prelim test: 348126
Number of HSP's gapped (non-prelim): 42434
length of query: 176
length of database: 8,064,228,071
effective HSP length: 132
effective length of query: 44
effective length of database: 9,262,057,059
effective search space: 407530510596
effective search space used: 407530510596
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 71 (32.0 bits)