BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>030483
MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVQE
SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEV
PFKEDSSRLPFPNFYYELEDVSASYSPAITYSVHRSSVIIGASPRSLYXXXXXXXX

High Scoring Gene Products

Symbol, full name Information P value
VEP1
AT4G24220
protein from Arabidopsis thaliana 2.3e-25
PSPTO_2695
Uncharacterized protein
protein from Pseudomonas syringae pv. tomato str. DC3000 1.9e-13
PSPPH_2587
Aldo-keto reductase family protein
protein from Pseudomonas syringae pv. phaseolicola 1448A 9.0e-10
AT5G58750 protein from Arabidopsis thaliana 1.8e-07

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  030483
        (176 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2135932 - symbol:VEP1 "VEIN PATTERNING 1" spec...   162  2.3e-25   2
UNIPROTKB|Q882D3 - symbol:PSPTO_2695 "Uncharacterized pro...   145  1.9e-13   2
UNIPROTKB|Q48IK0 - symbol:PSPPH_2587 "Aldo-keto reductase...   147  9.0e-10   1
TAIR|locus:2178793 - symbol:AT5G58750 species:3702 "Arabi...    89  1.8e-07   2


>TAIR|locus:2135932 [details] [associations]
            symbol:VEP1 "VEIN PATTERNING 1" species:3702 "Arabidopsis
            thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0009611 "response to wounding" evidence=IEP] [GO:0010051 "xylem
            and phloem pattern formation" evidence=IMP] [GO:0008202 "steroid
            metabolic process" evidence=IDA] [GO:0035671 "enone reductase
            activity" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
            InterPro:IPR016040 GO:GO:0005829 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0009611 GO:GO:0000166
            Gene3D:3.40.50.720 GO:GO:0008202 GO:GO:0010051 EMBL:AL161561
            GO:GO:0047787 EMBL:AL078637 UniGene:At.71005 GO:GO:0035671
            EMBL:X99793 EMBL:EF579963 EMBL:AY062451 EMBL:BT008479 EMBL:AY087323
            IPI:IPI00524911 IPI:IPI00540048 IPI:IPI00846354 PIR:T09885
            RefSeq:NP_001078438.1 RefSeq:NP_194153.1 UniGene:At.32364
            ProteinModelPortal:Q9STX2 SMR:Q9STX2 PRIDE:Q9STX2
            EnsemblPlants:AT4G24220.1 GeneID:828523 KEGG:ath:AT4G24220
            TAIR:At4g24220 eggNOG:NOG46937 HOGENOM:HOG000216741
            InParanoid:Q9STX2 OMA:GLKHYLG PhylomeDB:Q9STX2
            ProtClustDB:CLSN2685402 BioCyc:ARA:AT4G24220-MONOMER
            BioCyc:MetaCyc:AT4G24220-MONOMER Genevestigator:Q9STX2
            Uniprot:Q9STX2
        Length = 388

 Score = 162 (62.1 bits), Expect = 2.3e-25, Sum P(2) = 2.3e-25
 Identities = 33/51 (64%), Positives = 37/51 (72%)

Query:     2 EKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW 52
             ++  Q+ +SVALIIGVTGI G SLAE L    TPG PWKVYG ARRP P W
Sbjct:    19 DEPSQSFESVALIIGVTGIVGNSLAEILPLSDTPGGPWKVYGVARRPRPTW 69

 Score = 154 (59.3 bits), Expect = 2.3e-25, Sum P(2) = 2.3e-25
 Identities = 41/112 (36%), Positives = 55/112 (49%)

Query:    59 QESEEVNIFKNSTMLKXXXXXXXXXXXXXXXXXHVALLTGTKHYMGPIFDPSLAGQLMPY 118
             +ESE  N   N +ML+                 HV L TGTKHY+GP    ++ G    +
Sbjct:   109 RESESENCEANGSMLRNVLQAIIPYAPNLR---HVCLQTGTKHYLGPF--TNVDGPR--H 161

Query:   119 EVPFKEDSSRLPFPNFYYELEDV---SASYSPAITYSVHRSSVIIGASPRSL 167
             + PF ED  RL   NFYY  ED+          +T+S+HR ++I G SP SL
Sbjct:   162 DPPFTEDMPRLQIQNFYYTQEDILFEEIKKIETVTWSIHRPNMIFGFSPYSL 213


>UNIPROTKB|Q882D3 [details] [associations]
            symbol:PSPTO_2695 "Uncharacterized protein" species:223283
            "Pseudomonas syringae pv. tomato str. DC3000" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 EMBL:AE016853
            GenomeReviews:AE016853_GR eggNOG:NOG46937 HOGENOM:HOG000216741
            OMA:GLKHYLG ProtClustDB:CLSK903511 RefSeq:NP_792502.1
            ProteinModelPortal:Q882D3 GeneID:1184349 KEGG:pst:PSPTO_2695
            PATRIC:19996730 BioCyc:PSYR223283:GJIX-2742-MONOMER Uniprot:Q882D3
        Length = 353

 Score = 145 (56.1 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
 Identities = 42/119 (35%), Positives = 57/119 (47%)

Query:    47 RPPPGWFPTALVQESEEVNIFKNSTMLKXXXXXXXXXXXXXXXXXHVALLTGTKHYMGPI 106
             RP   +  T   Q +E  NI  N+ M++                 HVAL+TG KHY+GP 
Sbjct:    63 RPTHIFITTWSRQATEAENIRVNAAMVRNVLDAVRPAGSVK----HVALVTGLKHYLGP- 117

Query:   107 FDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELED--VSASYSPAITYSVHRSSVIIGAS 163
             F+    G L P + PF+E   RL   NFYY  ED   +A+     T+SVHR   + G +
Sbjct:   118 FEAYGKGTL-P-QTPFRESQPRLDIENFYYAQEDEVFAAAEKDRFTWSVHRPHTVTGVA 174

 Score = 56 (24.8 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
 Identities = 15/47 (31%), Positives = 24/47 (51%)

Query:    12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP--PGWFPTA 56
             AL++G +GI G ++ + L       + W+V   +R P   PG  P A
Sbjct:     5 ALVVGASGIVGSAITQLLLE-----NDWQVAALSRSPSTRPGVIPVA 46


>UNIPROTKB|Q48IK0 [details] [associations]
            symbol:PSPPH_2587 "Aldo-keto reductase family protein"
            species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
            [GO:0003824 "catalytic activity" evidence=ISS] [GO:0008152
            "metabolic process" evidence=ISS] InterPro:IPR016040 GO:GO:0003824
            GO:GO:0000166 Gene3D:3.40.50.720 EMBL:CP000058
            GenomeReviews:CP000058_GR eggNOG:NOG46937 HOGENOM:HOG000216741
            OMA:GLKHYLG RefSeq:YP_274781.1 ProteinModelPortal:Q48IK0
            STRING:Q48IK0 GeneID:3558882 KEGG:psp:PSPPH_2587 PATRIC:19974469
            ProtClustDB:CLSK903511 Uniprot:Q48IK0
        Length = 353

 Score = 147 (56.8 bits), Expect = 9.0e-10, P = 9.0e-10
 Identities = 46/143 (32%), Positives = 68/143 (47%)

Query:    23 LSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVQESEEVNIFKNSTMLKXXXXXXXX 82
             + +A  L+NP +  +      A  +P   +  T   Q +E  NI  N+ M++        
Sbjct:    43 IPVAADLQNPKSVSAAL----ADLKPTHVFITTWSRQATEAENIRVNAAMVRNVLDAVRP 98

Query:    83 XXXXXXXXXHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELED-- 140
                      HVAL+TG KHY+GP F+    G L P + PF+E  +RL   NFYY  ED  
Sbjct:    99 AGSVK----HVALVTGLKHYLGP-FEAYGKGTL-P-QTPFRETQARLDIENFYYAQEDEV 151

Query:   141 VSASYSPAITYSVHRSSVIIGAS 163
              +A+     T+SVHR   + G +
Sbjct:   152 FAAAEKDGFTWSVHRPHTVTGVA 174


>TAIR|locus:2178793 [details] [associations]
            symbol:AT5G58750 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005575
            "cellular_component" evidence=ND] InterPro:IPR016040 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0000166 Gene3D:3.40.50.720
            EMBL:AB020755 eggNOG:NOG46937 HOGENOM:HOG000216741
            ProtClustDB:CLSN2685402 EMBL:BT029538 IPI:IPI00518638
            RefSeq:NP_200683.1 UniGene:At.50537 ProteinModelPortal:Q9LUY6
            IntAct:Q9LUY6 PaxDb:Q9LUY6 PRIDE:Q9LUY6 EnsemblPlants:AT5G58750.1
            GeneID:835989 KEGG:ath:AT5G58750 TAIR:At5g58750 InParanoid:Q9LUY6
            OMA:FTWKEIW PhylomeDB:Q9LUY6 Genevestigator:Q9LUY6 Uniprot:Q9LUY6
        Length = 386

 Score = 89 (36.4 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
 Identities = 23/78 (29%), Positives = 39/78 (50%)

Query:    92 HVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSASY--SPAI 149
             H +L TG KHY+  + +    G+        +E   +    NFYY LED+        ++
Sbjct:   128 HFSLQTGMKHYVSLVEETMARGEGSSLYYYSEECPRKSSGKNFYYVLEDLLKEKITRSSV 187

Query:   150 TYSVHRSSVIIGASPRSL 167
              +SV R  +++G+S R+L
Sbjct:   188 VWSVQRPGLLMGSSSRTL 205

 Score = 86 (35.3 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
 Identities = 18/46 (39%), Positives = 30/46 (65%)

Query:     3 KQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48
             ++++  ++VALI GVTG+ G  + + L   + PG  W++YG AR P
Sbjct:    10 RRNEVDENVALIFGVTGLVGREIVKTLLM-SKPG--WRIYGVARNP 52


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.133   0.395    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      176       150   0.00087  104 3  11 23  0.38    32
                                                     30  0.39    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  558 (59 KB)
  Total size of DFA:  132 KB (2084 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.07u 0.23s 13.30t   Elapsed:  00:00:01
  Total cpu time:  13.07u 0.23s 13.30t   Elapsed:  00:00:01
  Start:  Sat May 11 02:47:08 2013   End:  Sat May 11 02:47:09 2013

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