Query 030483
Match_columns 176
No_of_seqs 177 out of 1264
Neff 8.5
Searched_HMMs 46136
Date Fri Mar 29 14:23:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030483.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/030483hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1087 GalE UDP-glucose 4-epi 99.9 5.2E-23 1.1E-27 163.5 12.3 133 10-165 1-178 (329)
2 PRK15181 Vi polysaccharide bio 99.9 4.2E-22 9E-27 164.4 13.4 133 8-164 14-200 (348)
3 PRK09987 dTDP-4-dehydrorhamnos 99.9 2.3E-22 5E-27 162.9 11.1 133 10-168 1-163 (299)
4 PF01073 3Beta_HSD: 3-beta hyd 99.9 1.2E-21 2.7E-26 157.6 12.4 141 13-171 1-193 (280)
5 KOG1502 Flavonol reductase/cin 99.8 2.5E-20 5.3E-25 150.9 12.7 143 8-166 5-201 (327)
6 COG1091 RfbD dTDP-4-dehydrorha 99.8 7E-21 1.5E-25 151.7 9.3 139 11-175 2-166 (281)
7 PLN02695 GDP-D-mannose-3',5'-e 99.8 5.7E-20 1.2E-24 153.1 14.2 146 1-164 11-202 (370)
8 COG0451 WcaG Nucleoside-diphos 99.8 8.3E-20 1.8E-24 147.2 14.6 132 11-165 2-178 (314)
9 PLN02214 cinnamoyl-CoA reducta 99.8 1.3E-19 2.9E-24 149.3 15.0 139 8-165 9-197 (342)
10 PLN02166 dTDP-glucose 4,6-dehy 99.8 4.6E-20 1E-24 156.7 12.5 131 9-164 120-298 (436)
11 PLN00198 anthocyanidin reducta 99.8 1E-19 2.2E-24 149.3 13.7 147 1-164 1-203 (338)
12 PLN02427 UDP-apiose/xylose syn 99.8 1.3E-19 2.9E-24 151.3 14.5 140 8-164 13-217 (386)
13 PRK11908 NAD-dependent epimera 99.8 1.3E-19 2.7E-24 149.3 14.0 134 10-165 2-185 (347)
14 PLN02572 UDP-sulfoquinovose sy 99.8 1.4E-19 3E-24 154.1 13.4 139 8-164 46-263 (442)
15 KOG1429 dTDP-glucose 4-6-dehyd 99.8 1.1E-19 2.3E-24 143.4 10.9 134 8-164 26-205 (350)
16 PLN02650 dihydroflavonol-4-red 99.8 3E-19 6.6E-24 147.3 13.6 137 9-165 5-199 (351)
17 PF01370 Epimerase: NAD depend 99.8 1E-19 2.2E-24 141.1 9.6 128 12-163 1-174 (236)
18 PLN02206 UDP-glucuronate decar 99.8 3E-19 6.6E-24 151.9 12.9 133 9-164 119-297 (442)
19 PRK08125 bifunctional UDP-gluc 99.8 4.4E-19 9.4E-24 157.6 13.6 135 9-165 315-499 (660)
20 PLN02989 cinnamyl-alcohol dehy 99.8 1.2E-18 2.6E-23 142.1 14.4 141 9-165 5-200 (325)
21 TIGR01214 rmlD dTDP-4-dehydror 99.8 6.2E-19 1.3E-23 141.1 12.4 129 11-164 1-155 (287)
22 PLN02986 cinnamyl-alcohol dehy 99.8 2.4E-18 5.2E-23 140.2 15.4 140 8-165 4-199 (322)
23 TIGR02622 CDP_4_6_dhtase CDP-g 99.8 7.1E-19 1.5E-23 145.0 12.1 136 8-164 3-194 (349)
24 PF04321 RmlD_sub_bind: RmlD s 99.8 2.7E-19 5.8E-24 144.4 9.3 135 10-169 1-161 (286)
25 PLN02662 cinnamyl-alcohol dehy 99.8 2.2E-18 4.8E-23 140.0 14.3 139 9-165 4-198 (322)
26 KOG1371 UDP-glucose 4-epimeras 99.8 6.8E-19 1.5E-23 141.2 9.6 130 9-161 2-185 (343)
27 TIGR01472 gmd GDP-mannose 4,6- 99.8 2.3E-18 4.9E-23 141.6 12.9 133 10-164 1-191 (343)
28 KOG1430 C-3 sterol dehydrogena 99.8 2.8E-18 6E-23 141.2 13.1 145 8-166 3-190 (361)
29 PRK11150 rfaD ADP-L-glycero-D- 99.8 2.5E-18 5.5E-23 139.2 12.1 128 12-164 2-175 (308)
30 PLN02725 GDP-4-keto-6-deoxyman 99.8 1.1E-18 2.4E-23 140.6 9.9 130 13-164 1-165 (306)
31 TIGR03466 HpnA hopanoid-associ 99.8 5E-18 1.1E-22 137.7 13.7 135 10-165 1-177 (328)
32 PLN02583 cinnamoyl-CoA reducta 99.8 3.7E-18 8E-23 138.1 12.8 139 9-164 6-198 (297)
33 PLN02240 UDP-glucose 4-epimera 99.8 7.2E-18 1.6E-22 138.7 14.2 135 7-164 3-192 (352)
34 PLN02896 cinnamyl-alcohol dehy 99.8 3.9E-18 8.6E-23 140.8 12.2 142 8-165 9-212 (353)
35 PRK10217 dTDP-glucose 4,6-dehy 99.8 6.9E-18 1.5E-22 139.1 13.3 138 10-164 2-195 (355)
36 PLN02260 probable rhamnose bio 99.8 6.4E-18 1.4E-22 150.3 12.9 137 9-164 6-194 (668)
37 PRK10675 UDP-galactose-4-epime 99.8 1.6E-17 3.5E-22 135.9 12.8 132 10-164 1-185 (338)
38 COG1088 RfbB dTDP-D-glucose 4, 99.7 1E-17 2.2E-22 133.1 10.3 136 10-164 1-187 (340)
39 PLN02686 cinnamoyl-CoA reducta 99.7 1.4E-17 3E-22 138.7 11.7 142 6-164 50-251 (367)
40 PLN02653 GDP-mannose 4,6-dehyd 99.7 2.6E-17 5.6E-22 135.1 12.9 137 9-165 6-198 (340)
41 TIGR01777 yfcH conserved hypot 99.7 3E-17 6.4E-22 131.2 12.2 131 12-164 1-170 (292)
42 PRK07201 short chain dehydroge 99.7 8.5E-17 1.8E-21 142.4 13.8 133 10-164 1-183 (657)
43 PLN00016 RNA-binding protein; 99.7 2.8E-17 6E-22 137.2 10.0 133 8-165 51-217 (378)
44 PLN02778 3,5-epimerase/4-reduc 99.7 2.7E-16 5.8E-21 127.5 13.5 145 1-164 1-171 (298)
45 TIGR02197 heptose_epim ADP-L-g 99.7 1.8E-16 3.9E-21 128.1 11.7 128 12-164 1-175 (314)
46 PRK10084 dTDP-glucose 4,6 dehy 99.7 3.2E-16 6.9E-21 129.1 11.7 145 10-164 1-202 (352)
47 COG3320 Putative dehydrogenase 99.7 7E-16 1.5E-20 126.4 13.4 144 10-170 1-208 (382)
48 TIGR01179 galE UDP-glucose-4-e 99.7 5.9E-16 1.3E-20 125.2 12.6 131 11-164 1-181 (328)
49 TIGR01181 dTDP_gluc_dehyt dTDP 99.7 1.1E-15 2.4E-20 123.2 12.3 133 11-164 1-185 (317)
50 CHL00194 ycf39 Ycf39; Provisio 99.7 3.3E-16 7.1E-21 127.8 9.0 119 10-162 1-150 (317)
51 KOG0747 Putative NAD+-dependen 99.6 2E-15 4.3E-20 119.3 10.9 135 10-164 7-192 (331)
52 TIGR01746 Thioester-redct thio 99.6 4.2E-15 9.2E-20 121.8 13.0 132 11-164 1-199 (367)
53 COG1090 Predicted nucleoside-d 99.6 5.1E-15 1.1E-19 116.8 12.3 132 12-165 1-169 (297)
54 TIGR03589 PseB UDP-N-acetylglu 99.6 3.5E-15 7.6E-20 122.2 12.0 124 8-164 3-173 (324)
55 PLN02996 fatty acyl-CoA reduct 99.6 7.2E-15 1.6E-19 126.7 13.9 88 8-104 10-167 (491)
56 PLN02260 probable rhamnose bio 99.6 4E-15 8.8E-20 132.4 9.8 146 8-172 379-553 (668)
57 PF13460 NAD_binding_10: NADH( 99.6 3.8E-15 8.3E-20 111.8 7.3 123 12-164 1-151 (183)
58 PF07993 NAD_binding_4: Male s 99.6 2.7E-15 5.9E-20 118.5 5.7 136 14-168 1-207 (249)
59 PLN00141 Tic62-NAD(P)-related 99.6 1.3E-14 2.9E-19 114.5 8.4 132 8-164 16-188 (251)
60 PLN02657 3,8-divinyl protochlo 99.6 2.4E-14 5.1E-19 120.3 10.1 123 8-163 59-224 (390)
61 PRK12320 hypothetical protein; 99.5 7.2E-14 1.6E-18 124.0 12.1 113 10-164 1-137 (699)
62 PLN02503 fatty acyl-CoA reduct 99.5 3.7E-13 8.1E-18 118.1 13.8 88 8-104 118-274 (605)
63 PF02719 Polysacc_synt_2: Poly 99.5 9.9E-14 2.1E-18 111.5 8.9 116 12-164 1-176 (293)
64 PRK05865 hypothetical protein; 99.5 2.4E-13 5.3E-18 122.9 11.7 110 10-165 1-134 (854)
65 COG1089 Gmd GDP-D-mannose dehy 99.4 8.6E-13 1.9E-17 104.6 9.9 136 8-165 1-191 (345)
66 PLN03209 translocon at the inn 99.4 1.2E-12 2.5E-17 113.7 11.4 127 8-164 79-258 (576)
67 COG1086 Predicted nucleoside-d 99.4 2.1E-12 4.6E-17 110.7 12.7 125 8-164 249-424 (588)
68 TIGR03443 alpha_am_amid L-amin 99.4 2.3E-12 5E-17 122.6 14.0 145 9-165 971-1185(1389)
69 TIGR03649 ergot_EASG ergot alk 99.3 1.9E-11 4.2E-16 98.0 12.2 114 11-162 1-141 (285)
70 PRK06482 short chain dehydroge 99.3 1E-11 2.3E-16 98.9 10.0 86 9-100 2-137 (276)
71 PRK13394 3-hydroxybutyrate deh 99.3 1E-11 2.3E-16 97.7 8.3 37 7-48 5-41 (262)
72 PRK12825 fabG 3-ketoacyl-(acyl 99.3 3.2E-11 7E-16 93.7 10.8 133 7-165 4-195 (249)
73 PRK12827 short chain dehydroge 99.3 2E-11 4.4E-16 95.2 9.5 132 7-164 4-198 (249)
74 KOG1431 GDP-L-fucose synthetas 99.3 9.7E-12 2.1E-16 96.0 7.3 133 10-164 2-171 (315)
75 PRK06180 short chain dehydroge 99.3 3.6E-11 7.7E-16 96.1 10.7 130 8-163 3-187 (277)
76 PRK06179 short chain dehydroge 99.3 1E-10 2.3E-15 92.8 12.5 126 9-164 4-183 (270)
77 PRK09135 pteridine reductase; 99.3 4.8E-11 1E-15 93.0 10.1 36 8-48 5-40 (249)
78 PRK12826 3-ketoacyl-(acyl-carr 99.3 1.5E-11 3.2E-16 96.1 6.9 133 7-164 4-194 (251)
79 PRK12429 3-hydroxybutyrate deh 99.2 2.1E-11 4.7E-16 95.6 7.4 37 8-49 3-39 (258)
80 PRK12745 3-ketoacyl-(acyl-carr 99.2 7E-11 1.5E-15 92.8 10.1 132 8-164 1-198 (256)
81 PRK06196 oxidoreductase; Provi 99.2 7.5E-11 1.6E-15 96.1 10.1 37 8-49 25-61 (315)
82 PRK08263 short chain dehydroge 99.2 9.3E-11 2E-15 93.5 9.7 90 7-102 1-140 (275)
83 PRK06523 short chain dehydroge 99.2 1.8E-10 3.9E-15 90.9 11.1 138 1-163 1-189 (260)
84 PRK12828 short chain dehydroge 99.2 3E-11 6.5E-16 93.6 6.6 131 8-164 6-192 (239)
85 PRK05653 fabG 3-ketoacyl-(acyl 99.2 5.7E-11 1.2E-15 92.3 8.2 133 7-165 3-193 (246)
86 TIGR01963 PHB_DH 3-hydroxybuty 99.2 2.3E-11 5E-16 95.3 5.9 34 10-48 2-35 (255)
87 PRK07453 protochlorophyllide o 99.2 8.1E-11 1.8E-15 96.1 9.2 92 7-103 4-150 (322)
88 PRK06914 short chain dehydroge 99.2 2.8E-10 6.2E-15 90.7 11.8 37 7-48 1-37 (280)
89 PRK07806 short chain dehydroge 99.2 1.4E-10 3.1E-15 90.7 8.7 85 7-99 4-136 (248)
90 PRK05993 short chain dehydroge 99.2 1.9E-10 4.2E-15 91.9 9.5 37 8-49 3-39 (277)
91 PRK07577 short chain dehydroge 99.2 3.1E-10 6.7E-15 88.0 10.4 129 8-163 2-176 (234)
92 TIGR03206 benzo_BadH 2-hydroxy 99.2 8.8E-11 1.9E-15 91.8 7.0 131 8-164 2-190 (250)
93 PRK07890 short chain dehydroge 99.2 1.9E-10 4.1E-15 90.4 8.8 130 8-164 4-192 (258)
94 PRK06182 short chain dehydroge 99.2 3.7E-10 8.1E-15 89.9 10.5 36 8-48 2-37 (273)
95 PRK12823 benD 1,6-dihydroxycyc 99.1 3.3E-10 7.1E-15 89.4 10.1 37 7-48 6-42 (260)
96 PRK09186 flagellin modificatio 99.1 5.9E-10 1.3E-14 87.5 11.1 36 8-48 3-38 (256)
97 PRK08220 2,3-dihydroxybenzoate 99.1 6.4E-10 1.4E-14 87.1 10.8 132 7-164 6-186 (252)
98 PRK07666 fabG 3-ketoacyl-(acyl 99.1 2.2E-10 4.8E-15 89.3 7.8 131 7-163 5-193 (239)
99 PRK06500 short chain dehydroge 99.1 1.5E-10 3.2E-15 90.5 6.8 128 7-163 4-187 (249)
100 PRK08264 short chain dehydroge 99.1 6.4E-10 1.4E-14 86.5 9.8 130 8-163 5-183 (238)
101 PRK12829 short chain dehydroge 99.1 6.8E-10 1.5E-14 87.4 9.8 38 6-48 8-45 (264)
102 PRK07060 short chain dehydroge 99.1 2.1E-10 4.6E-15 89.4 6.7 133 7-164 7-188 (245)
103 PRK07523 gluconate 5-dehydroge 99.1 2E-10 4.3E-15 90.4 6.6 131 8-164 9-197 (255)
104 PRK09291 short chain dehydroge 99.1 7.5E-10 1.6E-14 87.0 9.9 36 8-48 1-36 (257)
105 PRK12746 short chain dehydroge 99.1 9.9E-10 2.2E-14 86.2 10.2 130 7-164 4-198 (254)
106 PRK07775 short chain dehydroge 99.1 3.1E-10 6.8E-15 90.6 7.5 129 8-162 9-195 (274)
107 PRK07067 sorbitol dehydrogenas 99.1 3.5E-10 7.5E-15 89.2 7.5 131 8-163 5-190 (257)
108 PRK06138 short chain dehydroge 99.1 3E-10 6.5E-15 88.9 6.9 36 8-48 4-39 (252)
109 PRK07774 short chain dehydroge 99.1 3.7E-10 7.9E-15 88.4 7.4 128 8-164 5-193 (250)
110 PRK07985 oxidoreductase; Provi 99.1 1.6E-09 3.4E-14 87.6 11.1 128 8-163 48-236 (294)
111 PRK08628 short chain dehydroge 99.1 1.3E-09 2.7E-14 85.9 10.2 130 7-163 5-190 (258)
112 PRK06128 oxidoreductase; Provi 99.1 7.2E-10 1.6E-14 89.7 9.0 129 8-164 54-243 (300)
113 PRK05876 short chain dehydroge 99.1 3E-10 6.5E-15 91.0 6.7 129 7-164 4-194 (275)
114 PRK07024 short chain dehydroge 99.1 5.5E-10 1.2E-14 88.1 7.9 35 9-48 2-36 (257)
115 PRK05875 short chain dehydroge 99.1 1.1E-09 2.3E-14 87.2 9.1 37 7-48 5-41 (276)
116 PRK06550 fabG 3-ketoacyl-(acyl 99.0 2.9E-09 6.3E-14 82.6 11.3 132 7-164 3-178 (235)
117 PRK06398 aldose dehydrogenase; 99.0 3.3E-09 7.1E-14 84.0 11.8 90 7-102 4-135 (258)
118 PRK08085 gluconate 5-dehydroge 99.0 5.2E-10 1.1E-14 88.0 7.1 138 1-164 1-196 (254)
119 PRK05717 oxidoreductase; Valid 99.0 1.3E-09 2.8E-14 85.9 9.2 130 8-164 9-194 (255)
120 PRK06101 short chain dehydroge 99.0 1.9E-09 4.1E-14 84.3 9.9 127 10-164 2-179 (240)
121 PRK08219 short chain dehydroge 99.0 1.3E-09 2.8E-14 83.9 8.9 35 8-48 2-36 (227)
122 PRK08643 acetoin reductase; Va 99.0 9.8E-10 2.1E-14 86.4 7.7 36 8-48 1-36 (256)
123 PRK07102 short chain dehydroge 99.0 9.9E-10 2.2E-14 85.8 7.6 128 10-163 2-185 (243)
124 PRK05557 fabG 3-ketoacyl-(acyl 99.0 3.8E-09 8.2E-14 82.1 10.9 37 8-49 4-40 (248)
125 PRK08063 enoyl-(acyl carrier p 99.0 6.3E-10 1.4E-14 87.1 6.4 131 7-163 2-191 (250)
126 PRK12742 oxidoreductase; Provi 99.0 4.1E-09 8.8E-14 81.8 10.6 131 6-163 3-183 (237)
127 PRK06701 short chain dehydroge 99.0 1.9E-09 4.1E-14 87.0 9.0 129 8-164 45-233 (290)
128 PRK07326 short chain dehydroge 99.0 1.3E-09 2.8E-14 84.6 7.8 37 7-48 4-40 (237)
129 PRK08017 oxidoreductase; Provi 99.0 4.1E-09 8.9E-14 82.7 10.6 36 9-49 2-37 (256)
130 PRK07825 short chain dehydroge 99.0 1.4E-09 3.1E-14 86.4 8.0 37 7-48 3-39 (273)
131 PRK06123 short chain dehydroge 99.0 1.4E-09 3E-14 85.0 7.6 35 8-47 1-35 (248)
132 PRK06197 short chain dehydroge 99.0 2E-09 4.3E-14 87.2 8.8 36 8-48 15-50 (306)
133 PRK06194 hypothetical protein; 99.0 1.7E-09 3.6E-14 86.6 8.1 37 7-48 4-40 (287)
134 PRK07231 fabG 3-ketoacyl-(acyl 99.0 8.7E-10 1.9E-14 86.1 6.3 37 8-49 4-40 (251)
135 PRK10538 malonic semialdehyde 99.0 3E-09 6.5E-14 83.5 9.4 34 10-48 1-34 (248)
136 PRK08703 short chain dehydroge 99.0 9.3E-09 2E-13 80.1 12.0 38 6-48 3-40 (239)
137 PRK05786 fabG 3-ketoacyl-(acyl 99.0 2.1E-09 4.5E-14 83.5 8.2 38 7-49 3-40 (238)
138 PRK07856 short chain dehydroge 99.0 5.2E-09 1.1E-13 82.3 10.5 90 7-101 4-138 (252)
139 PRK08213 gluconate 5-dehydroge 99.0 1.4E-09 3E-14 85.8 6.9 89 8-102 11-153 (259)
140 TIGR01832 kduD 2-deoxy-D-gluco 99.0 3.8E-09 8.3E-14 82.6 9.3 132 7-163 3-190 (248)
141 PRK06171 sorbitol-6-phosphate 99.0 9E-09 1.9E-13 81.5 11.5 95 1-101 1-148 (266)
142 PRK06949 short chain dehydroge 99.0 1.7E-09 3.7E-14 85.0 7.2 40 4-48 4-43 (258)
143 PRK08251 short chain dehydroge 99.0 5E-09 1.1E-13 81.9 9.8 36 8-48 1-36 (248)
144 PRK06077 fabG 3-ketoacyl-(acyl 99.0 1.8E-09 4E-14 84.4 7.3 87 8-102 5-145 (252)
145 PRK12743 oxidoreductase; Provi 99.0 1.9E-09 4.1E-14 85.0 7.4 131 8-163 1-190 (256)
146 PRK12384 sorbitol-6-phosphate 99.0 2E-09 4.4E-14 84.8 7.5 36 8-48 1-36 (259)
147 PRK07454 short chain dehydroge 99.0 1.1E-09 2.3E-14 85.4 5.7 35 9-48 6-40 (241)
148 PRK12824 acetoacetyl-CoA reduc 98.9 8.6E-09 1.9E-13 80.2 10.4 35 9-48 2-36 (245)
149 PRK09730 putative NAD(P)-bindi 98.9 1.9E-09 4.2E-14 84.0 6.6 31 10-45 2-32 (247)
150 PRK05693 short chain dehydroge 98.9 6.5E-09 1.4E-13 82.8 9.8 34 10-48 2-35 (274)
151 PRK06114 short chain dehydroge 98.9 8.5E-09 1.9E-13 81.2 10.0 37 7-48 6-42 (254)
152 PRK07074 short chain dehydroge 98.9 9.7E-09 2.1E-13 80.8 10.1 37 8-49 1-37 (257)
153 PRK12747 short chain dehydroge 98.9 6.4E-09 1.4E-13 81.7 9.0 128 8-163 3-195 (252)
154 PRK06198 short chain dehydroge 98.9 3.5E-09 7.7E-14 83.4 7.5 134 5-163 2-194 (260)
155 PRK12935 acetoacetyl-CoA reduc 98.9 4.3E-09 9.4E-14 82.3 7.8 88 7-100 4-145 (247)
156 PRK09242 tropinone reductase; 98.9 3.9E-09 8.5E-14 83.1 7.6 133 6-164 6-198 (257)
157 PRK08267 short chain dehydroge 98.9 7.5E-09 1.6E-13 81.6 9.1 35 10-49 2-36 (260)
158 PRK12744 short chain dehydroge 98.9 1.3E-08 2.8E-13 80.3 10.3 35 8-47 7-41 (257)
159 PRK06057 short chain dehydroge 98.9 3.5E-09 7.5E-14 83.4 7.0 38 7-49 5-42 (255)
160 PRK06463 fabG 3-ketoacyl-(acyl 98.9 9.1E-09 2E-13 81.0 9.2 37 7-48 5-41 (255)
161 PRK07576 short chain dehydroge 98.9 4.2E-09 9.1E-14 83.6 7.1 43 1-48 1-43 (264)
162 PRK06124 gluconate 5-dehydroge 98.9 1.7E-08 3.8E-13 79.3 10.5 37 7-48 9-45 (256)
163 PRK06181 short chain dehydroge 98.9 5.4E-09 1.2E-13 82.5 7.6 34 10-48 2-35 (263)
164 KOG1221 Acyl-CoA reductase [Li 98.9 2E-08 4.2E-13 85.5 11.3 86 8-99 11-156 (467)
165 PRK05565 fabG 3-ketoacyl-(acyl 98.9 3.5E-09 7.6E-14 82.4 6.4 37 7-48 3-40 (247)
166 PRK07063 short chain dehydroge 98.9 1E-08 2.2E-13 80.9 9.0 37 7-48 5-41 (260)
167 PRK12748 3-ketoacyl-(acyl-carr 98.9 1.4E-08 3.1E-13 79.9 9.9 36 7-47 3-40 (256)
168 PRK05866 short chain dehydroge 98.9 9.5E-09 2.1E-13 83.1 8.9 36 8-48 39-74 (293)
169 PRK05855 short chain dehydroge 98.9 5.6E-09 1.2E-13 90.8 7.8 92 7-103 313-457 (582)
170 PRK08226 short chain dehydroge 98.9 2.1E-08 4.5E-13 79.2 10.1 37 7-48 4-40 (263)
171 PRK12939 short chain dehydroge 98.9 5.2E-09 1.1E-13 81.7 6.6 37 8-49 6-42 (250)
172 COG0300 DltE Short-chain dehyd 98.9 9.4E-09 2E-13 81.9 8.0 39 6-49 3-41 (265)
173 PRK12481 2-deoxy-D-gluconate 3 98.9 1.2E-08 2.6E-13 80.5 8.6 37 7-48 6-42 (251)
174 PRK08265 short chain dehydroge 98.9 1.2E-08 2.6E-13 80.8 8.5 88 7-101 4-140 (261)
175 PF05368 NmrA: NmrA-like famil 98.9 4.9E-09 1.1E-13 81.7 5.9 33 12-49 1-33 (233)
176 COG2910 Putative NADH-flavin r 98.9 7E-08 1.5E-12 72.5 11.7 126 10-164 1-162 (211)
177 PRK06841 short chain dehydroge 98.9 6.6E-09 1.4E-13 81.6 6.7 87 8-100 14-150 (255)
178 COG0702 Predicted nucleoside-d 98.9 1.9E-08 4.2E-13 79.4 9.4 36 10-50 1-36 (275)
179 PRK07904 short chain dehydroge 98.8 6.8E-08 1.5E-12 76.4 12.5 36 9-49 8-44 (253)
180 PRK07035 short chain dehydroge 98.8 7.8E-09 1.7E-13 81.1 7.0 37 7-48 6-42 (252)
181 PLN02253 xanthoxin dehydrogena 98.8 3.3E-08 7.1E-13 78.9 10.6 36 8-48 17-52 (280)
182 PRK05650 short chain dehydroge 98.8 9E-09 2E-13 81.8 7.1 34 10-48 1-34 (270)
183 PRK12937 short chain dehydroge 98.8 3.4E-08 7.4E-13 76.9 10.2 35 8-47 4-38 (245)
184 PRK08339 short chain dehydroge 98.8 1.3E-08 2.8E-13 80.9 7.6 42 1-48 1-42 (263)
185 PRK07109 short chain dehydroge 98.8 1.5E-08 3.2E-13 83.5 8.1 37 7-48 6-42 (334)
186 PRK07832 short chain dehydroge 98.8 1.4E-08 3E-13 80.9 7.7 34 10-48 1-34 (272)
187 PRK12938 acetyacetyl-CoA reduc 98.8 4.3E-08 9.3E-13 76.5 10.4 34 8-46 2-35 (246)
188 PRK07023 short chain dehydroge 98.8 2.6E-08 5.7E-13 77.8 9.1 35 10-49 2-36 (243)
189 PRK08589 short chain dehydroge 98.8 1.3E-08 2.9E-13 81.1 7.6 36 7-47 4-39 (272)
190 PRK05854 short chain dehydroge 98.8 2.2E-08 4.8E-13 81.6 9.0 37 7-48 12-48 (313)
191 PRK07069 short chain dehydroge 98.8 1.6E-08 3.5E-13 79.0 7.8 32 11-47 1-32 (251)
192 PRK06935 2-deoxy-D-gluconate 3 98.8 1.2E-08 2.6E-13 80.5 6.9 35 8-47 14-48 (258)
193 PRK06947 glucose-1-dehydrogena 98.8 1.5E-08 3.3E-13 79.2 7.3 34 8-46 1-34 (248)
194 PRK08278 short chain dehydroge 98.8 6E-08 1.3E-12 77.4 10.8 37 7-48 4-40 (273)
195 PRK07097 gluconate 5-dehydroge 98.8 1.8E-08 3.8E-13 79.9 7.7 37 7-48 8-44 (265)
196 PRK07814 short chain dehydroge 98.8 1.9E-08 4E-13 79.7 7.8 88 7-99 8-148 (263)
197 PRK12936 3-ketoacyl-(acyl-carr 98.8 1.3E-08 2.9E-13 79.1 6.8 37 7-48 4-40 (245)
198 PRK06113 7-alpha-hydroxysteroi 98.8 2.5E-08 5.4E-13 78.5 8.2 43 1-48 1-45 (255)
199 PRK07478 short chain dehydroge 98.8 2.2E-08 4.8E-13 78.7 7.8 36 8-48 5-40 (254)
200 PRK08993 2-deoxy-D-gluconate 3 98.8 5.1E-08 1.1E-12 76.8 9.8 131 7-162 8-194 (253)
201 PRK08324 short chain dehydroge 98.8 1.8E-08 3.9E-13 90.3 8.0 37 7-48 420-456 (681)
202 PRK09134 short chain dehydroge 98.8 6.5E-08 1.4E-12 76.3 9.9 35 8-47 8-42 (258)
203 PRK08945 putative oxoacyl-(acy 98.8 2.3E-08 5E-13 78.3 7.3 36 8-48 11-46 (247)
204 PRK06172 short chain dehydroge 98.8 1.9E-08 4.1E-13 78.9 6.8 36 8-48 6-41 (253)
205 PRK08642 fabG 3-ketoacyl-(acyl 98.8 7.4E-08 1.6E-12 75.4 10.1 34 9-47 5-38 (253)
206 PRK09072 short chain dehydroge 98.8 8E-08 1.7E-12 76.0 9.9 36 8-48 4-39 (263)
207 KOG4288 Predicted oxidoreducta 98.8 1.3E-07 2.9E-12 73.3 10.7 36 10-50 3-38 (283)
208 PRK05872 short chain dehydroge 98.7 2.7E-08 5.8E-13 80.4 7.3 94 2-102 2-147 (296)
209 PRK08277 D-mannonate oxidoredu 98.7 4.3E-08 9.2E-13 78.1 8.3 36 8-48 9-44 (278)
210 PRK07677 short chain dehydroge 98.7 3.4E-08 7.3E-13 77.6 7.5 35 9-48 1-35 (252)
211 PRK07062 short chain dehydroge 98.7 4.8E-08 1E-12 77.3 8.4 37 7-48 6-42 (265)
212 PRK07201 short chain dehydroge 98.7 3.7E-08 8.1E-13 87.5 8.4 37 7-48 369-405 (657)
213 PRK08177 short chain dehydroge 98.7 1.2E-07 2.6E-12 73.3 10.1 35 10-49 2-36 (225)
214 COG4221 Short-chain alcohol de 98.7 1.6E-07 3.5E-12 73.5 10.7 87 8-100 5-142 (246)
215 TIGR01830 3oxo_ACP_reduc 3-oxo 98.7 1E-07 2.2E-12 73.8 9.7 84 12-101 1-138 (239)
216 PRK06953 short chain dehydroge 98.7 2E-07 4.4E-12 71.9 11.1 129 10-163 2-181 (222)
217 PRK06924 short chain dehydroge 98.7 8.5E-08 1.8E-12 75.1 9.1 34 10-48 2-35 (251)
218 KOG1372 GDP-mannose 4,6 dehydr 98.7 4.1E-08 8.9E-13 77.1 7.1 112 9-141 28-189 (376)
219 PRK06483 dihydromonapterin red 98.7 7.3E-08 1.6E-12 74.9 8.5 37 8-49 1-37 (236)
220 PRK08936 glucose-1-dehydrogena 98.7 6.1E-08 1.3E-12 76.6 8.0 37 7-48 5-41 (261)
221 PRK06139 short chain dehydroge 98.7 4.6E-08 1E-12 80.6 7.3 37 7-48 5-41 (330)
222 KOG4039 Serine/threonine kinas 98.7 1.4E-07 3.1E-12 70.6 9.1 126 8-166 17-176 (238)
223 KOG2865 NADH:ubiquinone oxidor 98.7 2.1E-08 4.5E-13 80.1 5.0 120 11-164 63-219 (391)
224 TIGR02415 23BDH acetoin reduct 98.7 5E-08 1.1E-12 76.5 7.1 34 10-48 1-34 (254)
225 TIGR01829 AcAcCoA_reduct aceto 98.7 1.9E-07 4.2E-12 72.4 9.9 33 10-47 1-33 (242)
226 PRK05867 short chain dehydroge 98.7 5.4E-08 1.2E-12 76.5 6.5 37 7-48 7-43 (253)
227 TIGR01831 fabG_rel 3-oxoacyl-( 98.7 7.6E-08 1.6E-12 74.8 7.1 32 12-48 1-32 (239)
228 PRK08217 fabG 3-ketoacyl-(acyl 98.6 8E-08 1.7E-12 75.0 7.0 37 7-48 3-39 (253)
229 KOG1203 Predicted dehydrogenas 98.6 1.1E-07 2.4E-12 79.7 8.2 81 9-99 79-202 (411)
230 PLN02780 ketoreductase/ oxidor 98.6 1.1E-07 2.4E-12 78.0 7.3 35 9-48 53-87 (320)
231 PRK07578 short chain dehydroge 98.6 7.8E-07 1.7E-11 67.5 11.4 81 10-99 1-113 (199)
232 smart00822 PKS_KR This enzymat 98.6 2.6E-07 5.6E-12 67.5 8.5 80 10-99 1-137 (180)
233 TIGR01289 LPOR light-dependent 98.6 2.4E-07 5.1E-12 75.6 9.0 36 8-48 2-38 (314)
234 PRK06484 short chain dehydroge 98.6 8.7E-08 1.9E-12 83.0 6.9 124 8-163 268-451 (520)
235 TIGR03325 BphB_TodD cis-2,3-di 98.6 4.1E-07 8.8E-12 71.9 9.4 37 7-48 3-39 (262)
236 TIGR02632 RhaD_aldol-ADH rhamn 98.6 1.6E-07 3.6E-12 84.1 7.4 37 7-48 412-448 (676)
237 PRK06200 2,3-dihydroxy-2,3-dih 98.6 1.9E-07 4E-12 73.9 6.7 37 7-48 4-40 (263)
238 PRK07831 short chain dehydroge 98.5 3E-07 6.5E-12 72.6 7.8 36 8-48 16-52 (262)
239 PRK08416 7-alpha-hydroxysteroi 98.5 1E-06 2.2E-11 69.7 9.1 37 6-47 5-41 (260)
240 PRK07041 short chain dehydroge 98.5 3.1E-07 6.7E-12 71.0 5.9 80 13-102 1-128 (230)
241 PRK08261 fabG 3-ketoacyl-(acyl 98.5 2.2E-06 4.7E-11 73.2 11.4 89 7-101 208-346 (450)
242 PRK12367 short chain dehydroge 98.4 7.7E-07 1.7E-11 70.3 7.3 71 8-83 13-121 (245)
243 PRK06940 short chain dehydroge 98.4 1.1E-06 2.4E-11 70.3 8.1 83 8-100 1-128 (275)
244 KOG3019 Predicted nucleoside-d 98.4 1.5E-06 3.3E-11 67.6 7.9 143 8-166 11-189 (315)
245 PRK12859 3-ketoacyl-(acyl-carr 98.4 4.6E-06 1E-10 65.8 11.0 34 7-45 4-39 (256)
246 PRK08340 glucose-1-dehydrogena 98.4 7.7E-07 1.7E-11 70.2 6.4 34 10-48 1-34 (259)
247 TIGR02685 pter_reduc_Leis pter 98.4 5.4E-06 1.2E-10 65.7 11.0 33 10-47 2-34 (267)
248 PRK07792 fabG 3-ketoacyl-(acyl 98.4 3.1E-06 6.7E-11 68.8 9.5 35 8-47 11-45 (306)
249 PRK06125 short chain dehydroge 98.4 1.1E-06 2.5E-11 69.2 6.6 37 7-48 5-41 (259)
250 PRK06484 short chain dehydroge 98.4 1.2E-06 2.5E-11 76.0 7.1 37 8-49 4-40 (520)
251 PRK09009 C factor cell-cell si 98.3 1.5E-05 3.3E-10 61.7 12.7 34 10-48 1-36 (235)
252 PRK07533 enoyl-(acyl carrier p 98.3 3.2E-06 6.9E-11 66.9 8.7 43 1-48 2-46 (258)
253 PRK07791 short chain dehydroge 98.3 2.9E-06 6.2E-11 68.3 7.9 37 7-48 4-40 (286)
254 PRK06079 enoyl-(acyl carrier p 98.3 4.4E-06 9.6E-11 65.9 7.8 36 7-47 5-42 (252)
255 PRK06505 enoyl-(acyl carrier p 98.2 2E-05 4.3E-10 63.0 11.1 36 7-47 5-42 (271)
256 PRK08594 enoyl-(acyl carrier p 98.2 2E-05 4.4E-10 62.3 9.7 36 7-47 5-42 (257)
257 KOG1209 1-Acyl dihydroxyaceton 98.1 7.1E-06 1.5E-10 63.3 6.4 43 1-50 1-44 (289)
258 PRK07370 enoyl-(acyl carrier p 98.1 1.7E-05 3.7E-10 62.8 8.1 35 7-46 4-40 (258)
259 KOG1205 Predicted dehydrogenas 98.1 3.7E-05 8.1E-10 61.9 9.8 37 7-48 10-46 (282)
260 PRK08159 enoyl-(acyl carrier p 98.1 2.1E-05 4.6E-10 62.8 8.4 35 8-47 9-45 (272)
261 PRK06603 enoyl-(acyl carrier p 98.1 9.6E-05 2.1E-09 58.5 11.8 37 6-47 5-43 (260)
262 KOG2774 NAD dependent epimeras 98.0 1.4E-05 3E-10 62.7 6.4 85 9-103 44-164 (366)
263 PRK08690 enoyl-(acyl carrier p 98.0 2.9E-05 6.2E-10 61.6 8.5 36 7-47 4-41 (261)
264 KOG1208 Dehydrogenases with di 98.0 2.8E-05 6.2E-10 63.7 8.4 37 7-48 33-69 (314)
265 PRK07984 enoyl-(acyl carrier p 98.0 3.7E-05 7.9E-10 61.2 8.7 36 7-47 4-41 (262)
266 PRK06997 enoyl-(acyl carrier p 98.0 3.2E-05 6.9E-10 61.3 8.2 35 7-46 4-40 (260)
267 PRK05599 hypothetical protein; 97.9 5.4E-05 1.2E-09 59.4 8.5 33 10-48 1-33 (246)
268 KOG1611 Predicted short chain- 97.9 0.00015 3.3E-09 56.4 10.3 36 8-47 2-37 (249)
269 PF00106 adh_short: short chai 97.9 1.2E-05 2.6E-10 58.9 4.1 34 10-47 1-34 (167)
270 PRK07424 bifunctional sterol d 97.8 2.9E-05 6.2E-10 65.8 5.3 71 8-83 177-287 (406)
271 PRK05884 short chain dehydroge 97.8 3.1E-05 6.6E-10 60.0 4.5 33 11-48 2-34 (223)
272 PF08659 KR: KR domain; Inter 97.8 5.9E-05 1.3E-09 56.8 5.5 33 11-47 2-34 (181)
273 PRK08309 short chain dehydroge 97.7 4.6E-05 1E-09 57.5 4.6 33 10-48 1-33 (177)
274 PTZ00325 malate dehydrogenase; 97.7 0.00058 1.2E-08 56.2 11.1 87 7-101 6-128 (321)
275 KOG1201 Hydroxysteroid 17-beta 97.7 0.00026 5.7E-09 57.1 8.7 37 8-49 37-73 (300)
276 cd01336 MDH_cytoplasmic_cytoso 97.7 0.00055 1.2E-08 56.5 10.4 74 10-83 3-117 (325)
277 PRK09620 hypothetical protein; 97.7 7.6E-05 1.7E-09 58.6 4.9 35 8-47 2-52 (229)
278 COG3967 DltE Short-chain dehyd 97.6 0.00019 4.1E-09 55.2 6.5 38 7-49 3-40 (245)
279 PLN00015 protochlorophyllide r 97.6 4.6E-05 9.9E-10 62.0 3.4 31 13-48 1-32 (308)
280 PRK08303 short chain dehydroge 97.6 0.00011 2.3E-09 59.9 5.3 37 7-48 6-42 (305)
281 KOG1610 Corticosteroid 11-beta 97.5 0.0018 3.9E-08 52.7 11.4 33 8-45 28-60 (322)
282 PRK06720 hypothetical protein; 97.5 0.00016 3.4E-09 54.1 4.9 37 8-49 15-51 (169)
283 KOG0725 Reductases with broad 97.5 0.00056 1.2E-08 55.0 7.8 37 8-49 7-43 (270)
284 PRK07889 enoyl-(acyl carrier p 97.3 0.00036 7.8E-09 55.1 4.9 37 7-48 5-43 (256)
285 PRK14982 acyl-ACP reductase; P 97.3 0.00032 7E-09 58.1 4.8 38 7-48 153-191 (340)
286 TIGR02813 omega_3_PfaA polyket 97.3 0.0032 6.9E-08 64.0 12.3 36 8-47 1996-2031(2582)
287 PRK06732 phosphopantothenate-- 97.3 0.00034 7.3E-09 54.9 4.5 28 16-48 23-50 (229)
288 PRK08862 short chain dehydroge 97.3 0.00035 7.7E-09 54.4 4.5 38 7-49 3-40 (227)
289 COG1028 FabG Dehydrogenases wi 97.3 0.00046 1E-08 53.8 5.0 37 7-48 3-39 (251)
290 KOG1210 Predicted 3-ketosphing 97.3 0.0014 2.9E-08 53.4 7.4 36 9-49 33-68 (331)
291 PLN00106 malate dehydrogenase 97.2 0.0038 8.2E-08 51.5 10.0 83 9-99 18-136 (323)
292 PRK08415 enoyl-(acyl carrier p 97.2 0.00053 1.1E-08 54.9 4.6 36 7-47 3-40 (274)
293 KOG1200 Mitochondrial/plastidi 97.2 0.001 2.2E-08 51.0 5.7 37 8-49 13-49 (256)
294 PRK08664 aspartate-semialdehyd 97.1 0.001 2.2E-08 55.4 5.3 37 7-47 1-37 (349)
295 cd01078 NAD_bind_H4MPT_DH NADP 97.1 0.00099 2.2E-08 50.6 4.9 36 8-48 27-62 (194)
296 TIGR01500 sepiapter_red sepiap 97.0 0.0008 1.7E-08 52.9 4.2 33 11-48 2-38 (256)
297 PRK05086 malate dehydrogenase; 97.0 0.0073 1.6E-07 49.6 9.8 83 10-99 1-119 (312)
298 PRK05579 bifunctional phosphop 97.0 0.0011 2.4E-08 56.2 4.9 37 7-48 186-238 (399)
299 TIGR00715 precor6x_red precorr 96.9 0.0011 2.5E-08 52.8 4.2 34 10-49 1-34 (256)
300 KOG4169 15-hydroxyprostaglandi 96.9 0.0063 1.4E-07 47.6 8.1 35 8-47 4-38 (261)
301 PF01118 Semialdhyde_dh: Semia 96.9 0.0019 4.1E-08 45.5 4.6 33 11-47 1-33 (121)
302 PRK12428 3-alpha-hydroxysteroi 96.9 0.0058 1.3E-07 47.7 7.8 71 25-103 1-102 (241)
303 cd01338 MDH_choloroplast_like 96.7 0.01 2.2E-07 49.0 8.0 69 10-83 3-117 (322)
304 TIGR01915 npdG NADPH-dependent 96.5 0.0043 9.2E-08 48.1 4.6 35 10-49 1-35 (219)
305 PLN02730 enoyl-[acyl-carrier-p 96.5 0.0045 9.8E-08 50.6 4.8 32 7-43 7-40 (303)
306 PRK00436 argC N-acetyl-gamma-g 96.4 0.006 1.3E-07 50.7 5.2 35 9-47 2-36 (343)
307 cd05294 LDH-like_MDH_nadp A la 96.4 0.046 9.9E-07 44.8 10.0 80 10-98 1-122 (309)
308 PRK06300 enoyl-(acyl carrier p 96.4 0.0072 1.6E-07 49.2 5.2 35 7-46 6-42 (299)
309 PF00056 Ldh_1_N: lactate/mala 96.3 0.0068 1.5E-07 43.9 4.5 71 10-83 1-108 (141)
310 PRK14874 aspartate-semialdehyd 96.2 0.0067 1.5E-07 50.2 4.5 34 10-48 2-38 (334)
311 PLN02968 Probable N-acetyl-gam 96.2 0.0077 1.7E-07 50.8 4.7 37 8-48 37-73 (381)
312 PRK11199 tyrA bifunctional cho 96.1 0.0099 2.1E-07 49.9 4.8 37 8-49 97-133 (374)
313 cd00704 MDH Malate dehydrogena 96.0 0.087 1.9E-06 43.5 9.7 73 11-83 2-115 (323)
314 COG1748 LYS9 Saccharopine dehy 95.9 0.012 2.5E-07 49.7 4.4 34 10-49 2-36 (389)
315 TIGR01758 MDH_euk_cyt malate d 95.7 0.13 2.9E-06 42.4 9.9 73 11-83 1-114 (324)
316 PRK06849 hypothetical protein; 95.7 0.021 4.6E-07 48.0 5.1 37 8-49 3-39 (389)
317 TIGR00521 coaBC_dfp phosphopan 95.6 0.02 4.3E-07 48.5 4.6 38 7-49 183-236 (390)
318 PRK05671 aspartate-semialdehyd 95.5 0.019 4E-07 47.7 4.2 21 10-30 5-25 (336)
319 PRK12548 shikimate 5-dehydroge 95.5 0.027 5.8E-07 45.7 4.9 36 7-48 124-160 (289)
320 KOG1207 Diacetyl reductase/L-x 95.4 0.019 4E-07 43.4 3.5 38 8-50 6-43 (245)
321 KOG1204 Predicted dehydrogenas 95.4 0.049 1.1E-06 42.7 5.9 24 7-30 4-27 (253)
322 PRK08655 prephenate dehydrogen 95.4 0.023 5.1E-07 48.7 4.5 35 10-49 1-35 (437)
323 TIGR01759 MalateDH-SF1 malate 95.3 0.22 4.8E-06 41.1 10.0 69 10-83 4-118 (323)
324 PRK14106 murD UDP-N-acetylmura 95.3 0.029 6.3E-07 47.9 5.0 36 7-48 3-38 (450)
325 PRK06129 3-hydroxyacyl-CoA deh 95.3 0.023 5E-07 46.3 4.1 33 10-48 3-35 (308)
326 TIGR00978 asd_EA aspartate-sem 95.3 0.031 6.8E-07 46.3 4.8 32 10-45 1-32 (341)
327 PRK05442 malate dehydrogenase; 95.2 0.3 6.5E-06 40.4 10.3 69 10-83 5-119 (326)
328 KOG1014 17 beta-hydroxysteroid 95.1 0.033 7.2E-07 45.4 4.3 37 9-50 49-85 (312)
329 cd05291 HicDH_like L-2-hydroxy 95.1 0.18 3.8E-06 41.2 8.6 68 10-83 1-107 (306)
330 PRK11863 N-acetyl-gamma-glutam 94.9 0.064 1.4E-06 44.1 5.6 37 8-48 1-37 (313)
331 TIGR01850 argC N-acetyl-gamma- 94.9 0.048 1E-06 45.4 4.8 31 10-44 1-31 (346)
332 cd01075 NAD_bind_Leu_Phe_Val_D 94.8 0.064 1.4E-06 41.1 5.1 36 7-48 26-61 (200)
333 PRK02472 murD UDP-N-acetylmura 94.8 0.056 1.2E-06 46.1 5.1 35 8-48 4-38 (447)
334 KOG1478 3-keto sterol reductas 94.7 0.045 9.8E-07 43.7 4.0 25 7-31 1-25 (341)
335 PRK08818 prephenate dehydrogen 94.7 0.055 1.2E-06 45.5 4.7 36 9-48 4-39 (370)
336 PLN02383 aspartate semialdehyd 94.6 0.044 9.6E-07 45.6 4.0 28 8-40 6-33 (344)
337 PRK09496 trkA potassium transp 94.5 0.046 1E-06 46.6 4.1 34 10-49 1-34 (453)
338 PRK06249 2-dehydropantoate 2-r 94.4 0.076 1.7E-06 43.3 5.0 36 7-48 3-38 (313)
339 PF01113 DapB_N: Dihydrodipico 94.4 0.078 1.7E-06 37.4 4.3 35 10-48 1-36 (124)
340 TIGR01296 asd_B aspartate-semi 94.3 0.041 8.8E-07 45.7 3.1 27 11-42 1-27 (339)
341 PRK08229 2-dehydropantoate 2-r 94.2 0.066 1.4E-06 44.0 4.2 34 9-48 2-35 (341)
342 COG2085 Predicted dinucleotide 94.2 0.069 1.5E-06 41.3 4.0 34 12-50 3-36 (211)
343 cd01065 NAD_bind_Shikimate_DH 94.2 0.087 1.9E-06 38.0 4.4 35 8-48 18-53 (155)
344 PRK14619 NAD(P)H-dependent gly 94.2 0.095 2.1E-06 42.7 5.1 37 8-50 3-39 (308)
345 cd08259 Zn_ADH5 Alcohol dehydr 94.2 0.078 1.7E-06 42.7 4.5 36 8-48 162-197 (332)
346 PRK00258 aroE shikimate 5-dehy 94.2 0.087 1.9E-06 42.4 4.7 35 8-48 122-157 (278)
347 PF01488 Shikimate_DH: Shikima 94.2 0.084 1.8E-06 37.8 4.2 36 7-48 10-46 (135)
348 PRK06444 prephenate dehydrogen 94.2 0.062 1.3E-06 41.2 3.6 28 10-42 1-28 (197)
349 PRK00066 ldh L-lactate dehydro 94.1 0.39 8.4E-06 39.5 8.5 69 9-83 6-112 (315)
350 PLN02256 arogenate dehydrogena 94.1 0.097 2.1E-06 42.8 4.9 36 7-48 34-69 (304)
351 cd01080 NAD_bind_m-THF_DH_Cycl 94.0 0.12 2.7E-06 38.6 4.9 36 8-48 43-78 (168)
352 PF00070 Pyr_redox: Pyridine n 94.0 0.13 2.9E-06 33.0 4.5 35 11-51 1-35 (80)
353 PLN02520 bifunctional 3-dehydr 94.0 0.11 2.3E-06 45.8 5.2 36 7-48 377-412 (529)
354 PLN00112 malate dehydrogenase 93.9 0.34 7.4E-06 41.7 7.9 69 10-83 101-216 (444)
355 PF04127 DFP: DNA / pantothena 93.7 0.11 2.3E-06 39.5 4.2 36 8-48 2-53 (185)
356 PRK13656 trans-2-enoyl-CoA red 93.7 0.11 2.5E-06 43.9 4.6 34 8-47 40-75 (398)
357 PRK00048 dihydrodipicolinate r 93.6 0.16 3.5E-06 40.4 5.3 33 10-46 2-34 (257)
358 PF03435 Saccharop_dh: Sacchar 93.6 0.12 2.6E-06 43.3 4.7 34 12-50 1-35 (386)
359 PF02737 3HCDH_N: 3-hydroxyacy 93.5 0.09 1.9E-06 39.6 3.4 33 11-49 1-33 (180)
360 PRK11064 wecC UDP-N-acetyl-D-m 93.4 0.12 2.6E-06 44.1 4.5 34 10-49 4-37 (415)
361 PF03721 UDPG_MGDP_dh_N: UDP-g 93.4 0.09 2E-06 39.8 3.3 34 10-49 1-34 (185)
362 PRK06522 2-dehydropantoate 2-r 93.2 0.14 3.1E-06 41.1 4.5 33 10-48 1-33 (304)
363 cd08295 double_bond_reductase_ 93.2 0.15 3.3E-06 41.6 4.6 37 8-49 151-187 (338)
364 TIGR00507 aroE shikimate 5-deh 93.2 0.17 3.7E-06 40.5 4.8 35 8-48 116-150 (270)
365 PRK14192 bifunctional 5,10-met 93.1 0.21 4.6E-06 40.5 5.3 36 7-47 157-192 (283)
366 smart00859 Semialdhyde_dh Semi 93.1 0.19 4.1E-06 35.0 4.4 30 11-44 1-30 (122)
367 PF02826 2-Hacid_dh_C: D-isome 93.1 0.26 5.7E-06 36.9 5.4 37 8-50 35-71 (178)
368 PRK09260 3-hydroxybutyryl-CoA 93.0 0.14 2.9E-06 41.3 4.0 34 10-49 2-35 (288)
369 PRK06718 precorrin-2 dehydroge 93.0 0.2 4.4E-06 38.5 4.7 35 8-48 9-43 (202)
370 PRK07417 arogenate dehydrogena 92.9 0.14 2.9E-06 41.2 3.9 33 11-49 2-34 (279)
371 PRK14188 bifunctional 5,10-met 92.9 0.22 4.7E-06 40.7 5.0 36 7-47 156-192 (296)
372 PLN02602 lactate dehydrogenase 92.7 0.99 2.1E-05 37.7 8.8 68 10-83 38-144 (350)
373 PRK08040 putative semialdehyde 92.7 0.17 3.7E-06 42.0 4.2 23 8-30 3-25 (336)
374 COG0569 TrkA K+ transport syst 92.7 0.17 3.7E-06 39.5 4.1 35 10-50 1-35 (225)
375 PRK07502 cyclohexadienyl dehyd 92.7 0.21 4.4E-06 40.7 4.7 36 8-49 5-42 (307)
376 COG0039 Mdh Malate/lactate deh 92.6 1.7 3.7E-05 35.7 9.8 70 10-83 1-108 (313)
377 TIGR02853 spore_dpaA dipicolin 92.5 0.21 4.6E-06 40.5 4.5 36 8-49 150-185 (287)
378 PRK12409 D-amino acid dehydrog 92.3 0.24 5.2E-06 41.6 4.8 33 10-48 2-34 (410)
379 TIGR02825 B4_12hDH leukotriene 92.3 0.27 5.8E-06 39.9 4.9 36 8-48 138-173 (325)
380 PRK07530 3-hydroxybutyryl-CoA 92.2 0.24 5.3E-06 39.9 4.5 35 9-49 4-38 (292)
381 PF13241 NAD_binding_7: Putati 92.2 0.35 7.5E-06 32.9 4.6 34 8-47 6-39 (103)
382 PRK11559 garR tartronate semia 92.2 0.22 4.8E-06 40.1 4.2 35 9-49 2-36 (296)
383 TIGR02114 coaB_strep phosphopa 92.1 0.23 5E-06 38.8 4.1 27 16-47 22-48 (227)
384 cd01337 MDH_glyoxysomal_mitoch 92.1 0.29 6.2E-06 40.2 4.8 69 10-83 1-107 (310)
385 COG0287 TyrA Prephenate dehydr 92.1 0.26 5.7E-06 39.8 4.5 35 9-49 3-37 (279)
386 COG0002 ArgC Acetylglutamate s 92.0 0.25 5.4E-06 41.0 4.3 35 8-46 1-35 (349)
387 PRK14194 bifunctional 5,10-met 92.0 0.31 6.8E-06 39.8 4.8 38 7-49 157-194 (301)
388 cd05295 MDH_like Malate dehydr 92.0 1.1 2.3E-05 38.8 8.3 74 10-83 124-238 (452)
389 cd05191 NAD_bind_amino_acid_DH 91.9 0.47 1E-05 31.0 4.9 34 7-46 21-55 (86)
390 COG1004 Ugd Predicted UDP-gluc 91.9 1 2.3E-05 38.1 8.0 34 10-49 1-34 (414)
391 PRK07819 3-hydroxybutyryl-CoA 91.9 0.3 6.4E-06 39.5 4.6 35 10-50 6-40 (286)
392 cd08294 leukotriene_B4_DH_like 91.9 0.28 6.1E-06 39.5 4.6 36 8-48 143-178 (329)
393 PRK09496 trkA potassium transp 91.8 0.28 6E-06 41.8 4.7 36 8-49 230-265 (453)
394 cd08293 PTGR2 Prostaglandin re 91.8 0.26 5.7E-06 40.1 4.3 35 10-49 156-191 (345)
395 PLN02545 3-hydroxybutyryl-CoA 91.7 0.3 6.6E-06 39.4 4.5 34 10-49 5-38 (295)
396 COG0794 GutQ Predicted sugar p 91.7 1.8 3.9E-05 33.3 8.5 32 9-45 39-72 (202)
397 PRK11880 pyrroline-5-carboxyla 91.7 0.29 6.2E-06 38.8 4.3 35 9-49 2-39 (267)
398 PF12242 Eno-Rase_NADH_b: NAD( 91.7 0.51 1.1E-05 30.6 4.6 34 9-48 39-74 (78)
399 PRK00094 gpsA NAD(P)H-dependen 91.6 0.29 6.2E-06 39.8 4.4 33 10-48 2-34 (325)
400 PRK14618 NAD(P)H-dependent gly 91.6 0.37 8E-06 39.5 5.0 33 10-48 5-37 (328)
401 COG0604 Qor NADPH:quinone redu 91.6 0.25 5.5E-06 40.7 4.0 35 9-48 143-177 (326)
402 PRK08293 3-hydroxybutyryl-CoA 91.5 0.34 7.4E-06 39.0 4.7 34 10-49 4-37 (287)
403 PF03446 NAD_binding_2: NAD bi 91.4 0.33 7.1E-06 35.7 4.1 34 10-49 2-35 (163)
404 PRK07066 3-hydroxybutyryl-CoA 91.3 0.42 9.2E-06 39.4 5.0 35 9-49 7-41 (321)
405 PRK06035 3-hydroxyacyl-CoA deh 91.3 0.36 7.7E-06 39.0 4.5 34 10-49 4-37 (291)
406 PLN03154 putative allyl alcoho 91.2 0.38 8.2E-06 39.7 4.8 36 8-48 158-193 (348)
407 PRK14175 bifunctional 5,10-met 91.2 0.46 1E-05 38.6 5.1 37 7-48 156-192 (286)
408 PRK05808 3-hydroxybutyryl-CoA 91.2 0.32 7E-06 39.0 4.2 34 10-49 4-37 (282)
409 PRK01438 murD UDP-N-acetylmura 91.2 0.46 1E-05 41.0 5.4 35 8-48 15-49 (480)
410 PRK07688 thiamine/molybdopteri 91.2 0.24 5.1E-06 41.2 3.4 35 8-48 23-58 (339)
411 PRK06130 3-hydroxybutyryl-CoA 91.1 0.42 9E-06 38.8 4.8 33 10-48 5-37 (311)
412 cd05276 p53_inducible_oxidored 91.1 0.4 8.7E-06 37.9 4.6 36 8-48 139-174 (323)
413 PF13380 CoA_binding_2: CoA bi 91.0 0.38 8.1E-06 33.6 3.9 79 10-98 1-88 (116)
414 PRK07236 hypothetical protein; 91.0 0.42 9.1E-06 39.9 4.8 37 7-49 4-40 (386)
415 TIGR01851 argC_other N-acetyl- 90.9 0.44 9.5E-06 39.1 4.7 32 10-45 2-33 (310)
416 PRK08306 dipicolinate synthase 90.8 0.43 9.4E-06 38.8 4.6 36 8-49 151-186 (296)
417 cd08253 zeta_crystallin Zeta-c 90.8 0.42 9E-06 37.9 4.5 36 8-48 144-179 (325)
418 TIGR02354 thiF_fam2 thiamine b 90.6 0.19 4.2E-06 38.5 2.3 34 8-47 20-54 (200)
419 PRK12475 thiamine/molybdopteri 90.6 0.3 6.6E-06 40.5 3.6 36 7-48 22-58 (338)
420 TIGR01772 MDH_euk_gproteo mala 90.6 0.42 9.2E-06 39.3 4.4 68 11-83 1-106 (312)
421 PRK06598 aspartate-semialdehyd 90.6 0.38 8.3E-06 40.4 4.1 33 10-46 2-37 (369)
422 cd05188 MDR Medium chain reduc 90.5 0.45 9.8E-06 36.8 4.3 35 8-48 134-168 (271)
423 TIGR02356 adenyl_thiF thiazole 90.5 0.2 4.3E-06 38.4 2.2 36 7-48 19-55 (202)
424 PRK05708 2-dehydropantoate 2-r 90.2 0.48 1E-05 38.6 4.4 34 9-48 2-35 (305)
425 PRK00711 D-amino acid dehydrog 90.2 0.52 1.1E-05 39.6 4.7 33 10-48 1-33 (416)
426 PRK12921 2-dehydropantoate 2-r 90.2 0.44 9.4E-06 38.4 4.1 31 10-46 1-31 (305)
427 cd08268 MDR2 Medium chain dehy 90.2 0.55 1.2E-05 37.3 4.7 36 8-48 144-179 (328)
428 COG0665 DadA Glycine/D-amino a 90.2 0.54 1.2E-05 38.9 4.7 37 7-49 2-38 (387)
429 cd08289 MDR_yhfp_like Yhfp put 90.2 0.52 1.1E-05 37.9 4.5 36 9-49 147-182 (326)
430 PRK11259 solA N-methyltryptoph 90.1 0.53 1.2E-05 38.8 4.7 34 10-49 4-37 (376)
431 cd05293 LDH_1 A subgroup of L- 90.1 1.8 3.8E-05 35.6 7.6 71 9-83 3-110 (312)
432 cd05212 NAD_bind_m-THF_DH_Cycl 90.0 0.95 2.1E-05 32.8 5.3 37 6-47 25-61 (140)
433 PRK07679 pyrroline-5-carboxyla 89.9 0.64 1.4E-05 37.3 4.9 34 9-48 3-40 (279)
434 PRK04308 murD UDP-N-acetylmura 89.9 0.73 1.6E-05 39.4 5.5 35 8-48 4-38 (445)
435 PRK06728 aspartate-semialdehyd 89.7 0.75 1.6E-05 38.4 5.2 28 9-40 5-32 (347)
436 PLN02712 arogenate dehydrogena 89.7 0.62 1.3E-05 42.3 5.0 35 8-48 368-402 (667)
437 KOG4022 Dihydropteridine reduc 89.6 0.77 1.7E-05 34.5 4.6 36 8-48 2-37 (236)
438 PRK09310 aroDE bifunctional 3- 89.6 0.72 1.6E-05 40.1 5.2 36 7-48 330-365 (477)
439 PF10727 Rossmann-like: Rossma 89.5 0.22 4.7E-06 35.5 1.6 34 6-45 7-40 (127)
440 PRK12480 D-lactate dehydrogena 89.5 0.7 1.5E-05 38.2 4.9 36 8-49 145-180 (330)
441 PRK09288 purT phosphoribosylgl 89.5 0.79 1.7E-05 38.4 5.3 35 9-49 12-46 (395)
442 PF02670 DXP_reductoisom: 1-de 89.4 0.73 1.6E-05 33.0 4.3 32 12-46 1-32 (129)
443 TIGR01757 Malate-DH_plant mala 89.4 2.6 5.6E-05 35.8 8.2 21 10-30 45-65 (387)
444 PRK13243 glyoxylate reductase; 89.4 0.7 1.5E-05 38.3 4.8 36 8-49 149-184 (333)
445 cd08266 Zn_ADH_like1 Alcohol d 89.2 0.68 1.5E-05 37.1 4.6 36 8-48 166-201 (342)
446 PRK06719 precorrin-2 dehydroge 89.2 0.85 1.8E-05 33.6 4.7 34 8-47 12-45 (157)
447 TIGR03026 NDP-sugDHase nucleot 89.2 0.52 1.1E-05 40.0 4.0 33 11-49 2-34 (411)
448 cd05288 PGDH Prostaglandin deh 89.1 0.64 1.4E-05 37.4 4.3 36 8-48 145-180 (329)
449 cd01485 E1-1_like Ubiquitin ac 89.0 0.26 5.6E-06 37.7 1.9 35 8-48 18-53 (198)
450 cd08250 Mgc45594_like Mgc45594 88.9 0.72 1.6E-05 37.2 4.5 36 8-48 139-174 (329)
451 TIGR02824 quinone_pig3 putativ 88.9 0.73 1.6E-05 36.5 4.5 36 8-48 139-174 (325)
452 PRK06223 malate dehydrogenase; 88.8 0.89 1.9E-05 36.9 5.0 34 10-49 3-37 (307)
453 cd01492 Aos1_SUMO Ubiquitin ac 88.8 0.25 5.5E-06 37.7 1.7 36 7-48 19-55 (197)
454 cd01076 NAD_bind_1_Glu_DH NAD( 88.7 1.1 2.4E-05 35.1 5.2 36 7-48 29-64 (227)
455 PRK14620 NAD(P)H-dependent gly 88.7 0.76 1.6E-05 37.6 4.5 32 11-48 2-33 (326)
456 PRK06753 hypothetical protein; 88.6 0.77 1.7E-05 37.9 4.6 34 10-49 1-34 (373)
457 PRK07531 bifunctional 3-hydrox 88.5 0.78 1.7E-05 40.0 4.7 34 10-49 5-38 (495)
458 PRK11749 dihydropyrimidine deh 88.5 0.82 1.8E-05 39.3 4.8 36 8-49 139-174 (457)
459 PRK05678 succinyl-CoA syntheta 88.5 1.4 2.9E-05 36.0 5.8 35 8-47 7-42 (291)
460 TIGR01035 hemA glutamyl-tRNA r 88.5 0.86 1.9E-05 38.9 4.8 37 7-49 178-215 (417)
461 PTZ00318 NADH dehydrogenase-li 88.4 1.1 2.5E-05 38.0 5.5 38 7-50 8-45 (424)
462 TIGR01019 sucCoAalpha succinyl 88.4 1.5 3.3E-05 35.5 6.0 31 8-43 5-35 (286)
463 PRK11728 hydroxyglutarate oxid 88.3 0.81 1.8E-05 38.3 4.5 33 10-48 3-37 (393)
464 cd08244 MDR_enoyl_red Possible 88.2 0.88 1.9E-05 36.4 4.6 36 8-48 142-177 (324)
465 PRK05476 S-adenosyl-L-homocyst 88.0 0.92 2E-05 38.9 4.7 37 8-50 211-247 (425)
466 cd00757 ThiF_MoeB_HesA_family 88.0 0.32 6.9E-06 37.9 1.8 38 4-47 16-54 (228)
467 PLN02712 arogenate dehydrogena 88.0 0.9 2E-05 41.2 4.9 34 9-48 52-85 (667)
468 PRK14179 bifunctional 5,10-met 88.0 0.74 1.6E-05 37.4 3.9 33 7-44 156-188 (284)
469 PF01210 NAD_Gly3P_dh_N: NAD-d 88.0 0.87 1.9E-05 33.3 4.0 32 11-48 1-32 (157)
470 PRK09126 hypothetical protein; 87.8 0.92 2E-05 37.7 4.6 37 7-49 1-37 (392)
471 PF02254 TrkA_N: TrkA-N domain 87.8 0.73 1.6E-05 31.4 3.4 32 12-49 1-32 (116)
472 PF02558 ApbA: Ketopantoate re 87.7 0.91 2E-05 32.5 4.0 31 12-48 1-31 (151)
473 PRK08268 3-hydroxy-acyl-CoA de 87.7 1 2.2E-05 39.5 4.9 34 10-49 8-41 (507)
474 PRK08773 2-octaprenyl-3-methyl 87.7 1.4 2.9E-05 36.8 5.5 36 8-49 5-40 (392)
475 PF03807 F420_oxidored: NADP o 87.7 0.96 2.1E-05 29.8 3.8 33 11-49 1-37 (96)
476 TIGR02817 adh_fam_1 zinc-bindi 87.6 0.87 1.9E-05 36.8 4.2 35 9-48 149-184 (336)
477 cd05289 MDR_like_2 alcohol deh 87.6 1.1 2.3E-05 35.3 4.7 36 8-48 144-179 (309)
478 COG0289 DapB Dihydrodipicolina 87.6 1.4 3.1E-05 35.3 5.2 37 9-49 2-39 (266)
479 cd05292 LDH_2 A subgroup of L- 87.6 1 2.2E-05 36.8 4.6 68 10-83 1-106 (308)
480 cd08243 quinone_oxidoreductase 87.6 1 2.2E-05 35.8 4.5 36 8-48 142-177 (320)
481 PRK06019 phosphoribosylaminoim 87.6 1.1 2.5E-05 37.4 5.0 34 10-49 3-36 (372)
482 PRK05335 tRNA (uracil-5-)-meth 87.4 1 2.3E-05 38.7 4.7 35 9-49 2-36 (436)
483 TIGR01505 tartro_sem_red 2-hyd 87.4 0.67 1.4E-05 37.3 3.4 33 11-49 1-33 (291)
484 TIGR00243 Dxr 1-deoxy-D-xylulo 87.4 1 2.2E-05 38.1 4.5 34 10-46 2-35 (389)
485 cd05213 NAD_bind_Glutamyl_tRNA 87.2 1.1 2.5E-05 36.5 4.7 37 8-49 177-213 (311)
486 cd08292 ETR_like_2 2-enoyl thi 87.2 0.98 2.1E-05 36.2 4.3 36 8-48 139-174 (324)
487 PRK15469 ghrA bifunctional gly 87.1 1.7 3.8E-05 35.6 5.7 36 8-49 135-170 (312)
488 PF13561 adh_short_C2: Enoyl-( 87.0 0.71 1.5E-05 35.7 3.3 30 16-50 1-32 (241)
489 PF00899 ThiF: ThiF family; I 87.0 0.98 2.1E-05 32.0 3.7 35 9-49 2-37 (135)
490 PRK06545 prephenate dehydrogen 86.9 0.95 2.1E-05 37.8 4.1 34 10-49 1-34 (359)
491 cd08274 MDR9 Medium chain dehy 86.9 1.2 2.7E-05 36.1 4.8 36 8-48 177-212 (350)
492 PRK06436 glycerate dehydrogena 86.8 1.3 2.9E-05 36.2 4.9 36 8-49 121-156 (303)
493 cd08241 QOR1 Quinone oxidoredu 86.8 1.1 2.4E-05 35.4 4.3 36 8-48 139-174 (323)
494 PRK05447 1-deoxy-D-xylulose 5- 86.8 1.3 2.7E-05 37.6 4.7 33 10-45 2-34 (385)
495 KOG1496 Malate dehydrogenase [ 86.7 0.58 1.3E-05 37.2 2.6 21 10-30 5-25 (332)
496 KOG1198 Zinc-binding oxidoredu 86.7 1.4 3.1E-05 36.7 5.1 37 7-48 156-192 (347)
497 PRK08163 salicylate hydroxylas 86.7 1.2 2.7E-05 37.0 4.7 35 9-49 4-38 (396)
498 KOG4288 Predicted oxidoreducta 86.7 0.36 7.7E-06 38.2 1.4 121 10-165 53-208 (283)
499 cd05282 ETR_like 2-enoyl thioe 86.7 1.2 2.5E-05 35.7 4.5 37 8-49 138-174 (323)
500 PRK13982 bifunctional SbtC-lik 86.6 1.2 2.6E-05 38.8 4.6 35 6-45 253-303 (475)
No 1
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=99.90 E-value=5.2e-23 Score=163.49 Aligned_cols=133 Identities=17% Similarity=0.149 Sum_probs=104.7
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-----CC--C-------C-------------Ccc----
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----WF--P-------T-------------ALV---- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~~--~-------~-------------~~v---- 58 (176)
|+||||||+||||||.|.+|+ +.|++|+.+++-.... +. + + +.|
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll-----~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFA 75 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLL-----KTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFA 75 (329)
T ss_pred CeEEEecCcchhHHHHHHHHH-----HCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECc
Confidence 589999999999999999999 7999999998643221 10 0 0 000
Q ss_pred --------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCC
Q 030483 59 --------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLP 130 (176)
Q Consensus 59 --------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~ 130 (176)
-..|.++++.|+.+|.+|+++|+++ ++++|||.||+++||.+. ..|++|+.|..|
T Consensus 76 a~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~-----gv~~~vFSStAavYG~p~------------~~PI~E~~~~~p 138 (329)
T COG1087 76 ASISVGESVQNPLKYYDNNVVGTLNLIEAMLQT-----GVKKFIFSSTAAVYGEPT------------TSPISETSPLAP 138 (329)
T ss_pred cccccchhhhCHHHHHhhchHhHHHHHHHHHHh-----CCCEEEEecchhhcCCCC------------CcccCCCCCCCC
Confidence 3367889999999999999999998 699999999999999652 579999998762
Q ss_pred CCcchH----HHHHHHHh--hCCCceEEEeccCceEeCCCC
Q 030483 131 FPNFYY----ELEDVSAS--YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 131 ~~~~y~----~~e~~~~~--~~~g~~~~ivRp~~v~G~~~~ 165 (176)
.++|. ..|++++. +.++|+.+++|.+|+.|..+.
T Consensus 139 -~NPYG~sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~ 178 (329)
T COG1087 139 -INPYGRSKLMSEEILRDAAKANPFKVVILRYFNVAGACPD 178 (329)
T ss_pred -CCcchhHHHHHHHHHHHHHHhCCCcEEEEEecccccCCCC
Confidence 23443 34555555 577899999999999998763
No 2
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=99.88 E-value=4.2e-22 Score=164.44 Aligned_cols=133 Identities=18% Similarity=0.126 Sum_probs=97.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------------CCC------C-----------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------------WFP------T----------- 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------------~~~------~----------- 55 (176)
.+|+|||||||||||++|+++|+ .+|++|++++|..... +.. +
T Consensus 14 ~~~~vlVtGatGfiG~~lv~~L~-----~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~ 88 (348)
T PRK15181 14 APKRWLITGVAGFIGSGLLEELL-----FLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKAC 88 (348)
T ss_pred cCCEEEEECCccHHHHHHHHHHH-----HCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHh
Confidence 45799999999999999999999 6899999999853210 000 0
Q ss_pred ---Ccc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCc
Q 030483 56 ---ALV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEV 120 (176)
Q Consensus 56 ---~~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~ 120 (176)
+.| ..++.+.+++|+.+|.|++++|++. ++++|+++||+++||.. ...
T Consensus 89 ~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-----~~~~~v~~SS~~vyg~~------------~~~ 151 (348)
T PRK15181 89 KNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDA-----HVSSFTYAASSSTYGDH------------PDL 151 (348)
T ss_pred hCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCeEEEeechHhhCCC------------CCC
Confidence 001 1244567899999999999999987 68899999999999832 134
Q ss_pred cccCCCCCCCCCcchHHHHH-----HHHh--hCCCceEEEeccCceEeCCC
Q 030483 121 PFKEDSSRLPFPNFYYELED-----VSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 121 p~~E~~~~~~~~~~y~~~e~-----~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
|..|+++.. |...|...| ++.. +.++++++++||++||||+.
T Consensus 152 ~~~e~~~~~--p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~ 200 (348)
T PRK15181 152 PKIEERIGR--PLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQ 200 (348)
T ss_pred CCCCCCCCC--CCChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCC
Confidence 566766543 333344333 3332 35689999999999999975
No 3
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=99.88 E-value=2.3e-22 Score=162.86 Aligned_cols=133 Identities=14% Similarity=0.158 Sum_probs=97.6
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC----CCC-----------CCCcc------------cCcH
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP----GWF-----------PTALV------------QESE 62 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~----~~~-----------~~~~v------------~~~~ 62 (176)
|+||||||+||||++|+++|+ ++| +|++++|.... ... ..+.| ..++
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~-----~~g-~V~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~ 74 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALA-----PLG-NLIALDVHSTDYCGDFSNPEGVAETVRKIRPDVIVNAAAHTAVDKAESEP 74 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhh-----ccC-CEEEeccccccccCCCCCHHHHHHHHHhcCCCEEEECCccCCcchhhcCH
Confidence 479999999999999999999 678 79999986421 100 01111 2245
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHHHHHH
Q 030483 63 EVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVS 142 (176)
Q Consensus 63 ~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~ 142 (176)
+..+++|+.++.+++++|++. ++ +++++||..+|++. ...|++|+++.. |...|...|+.
T Consensus 75 ~~~~~~N~~~~~~l~~aa~~~-----g~-~~v~~Ss~~Vy~~~------------~~~p~~E~~~~~--P~~~Yg~sK~~ 134 (299)
T PRK09987 75 EFAQLLNATSVEAIAKAANEV-----GA-WVVHYSTDYVFPGT------------GDIPWQETDATA--PLNVYGETKLA 134 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHc-----CC-eEEEEccceEECCC------------CCCCcCCCCCCC--CCCHHHHHHHH
Confidence 667789999999999999987 43 69999999999753 135899998754 44456655555
Q ss_pred Hh---hCCCceEEEeccCceEeCCCCCCC
Q 030483 143 AS---YSPAITYSVHRSSVIIGASPRSLY 168 (176)
Q Consensus 143 ~~---~~~g~~~~ivRp~~v~G~~~~~~~ 168 (176)
.| .....+++|+|+++||||+..+++
T Consensus 135 ~E~~~~~~~~~~~ilR~~~vyGp~~~~~~ 163 (299)
T PRK09987 135 GEKALQEHCAKHLIFRTSWVYAGKGNNFA 163 (299)
T ss_pred HHHHHHHhCCCEEEEecceecCCCCCCHH
Confidence 55 234557899999999999865443
No 4
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.87 E-value=1.2e-21 Score=157.60 Aligned_cols=141 Identities=18% Similarity=0.179 Sum_probs=96.8
Q ss_pred EEEcCChHHHHHHHHHhhCCCCCCCC--cEEEEEecCCCCCC----C--CC---------------------Ccc-----
Q 030483 13 LIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPGW----F--PT---------------------ALV----- 58 (176)
Q Consensus 13 LVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~~~----~--~~---------------------~~v----- 58 (176)
|||||+||||+||+++|+ ++| ++|++++|.+.... . +. +.|
T Consensus 1 LVTGgsGflG~~iv~~Ll-----~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa 75 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLL-----ERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAA 75 (280)
T ss_pred CEEcCCcHHHHHHHHHHH-----HCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCc
Confidence 799999999999999999 688 78999998765421 0 00 001
Q ss_pred ----c--CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCC
Q 030483 59 ----Q--ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFP 132 (176)
Q Consensus 59 ----~--~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~ 132 (176)
. ...++.+++|+.||+||+++|++. +++++||+||..+++.... +. .-...+|+.+..+.+
T Consensus 76 ~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~-----~VkrlVytSS~~vv~~~~~-----~~---~~~~~dE~~~~~~~~ 142 (280)
T PF01073_consen 76 PVPPWGDYPPEEYYKVNVDGTRNVLEAARKA-----GVKRLVYTSSISVVFDNYK-----GD---PIINGDEDTPYPSSP 142 (280)
T ss_pred cccccCcccHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEcCcceeEeccC-----CC---CcccCCcCCcccccc
Confidence 2 245678999999999999999987 7999999999999874210 10 011234555433223
Q ss_pred cchHHHHHHHHh------hC------CCceEEEeccCceEeCCCCCCCCCC
Q 030483 133 NFYYELEDVSAS------YS------PAITYSVHRSSVIIGASPRSLYXXX 171 (176)
Q Consensus 133 ~~y~~~e~~~~~------~~------~g~~~~ivRp~~v~G~~~~~~~~~~ 171 (176)
...|...|.++| .. ..+.++++||+.||||+...+...+
T Consensus 143 ~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~ 193 (280)
T PF01073_consen 143 LDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRL 193 (280)
T ss_pred cCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchh
Confidence 334554444443 12 2499999999999999975544443
No 5
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=99.84 E-value=2.5e-20 Score=150.88 Aligned_cols=143 Identities=17% Similarity=0.174 Sum_probs=102.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC--------C--C--C--------------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------F--P--T-------------------- 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~--------~--~--~-------------------- 55 (176)
++++|||||||||||+||+++|| .+||.|++..|++.+.. . + .
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL-----~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gc 79 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLL-----SRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGC 79 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHH-----hCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCC
Confidence 66899999999999999999999 79999999999987620 0 0 0
Q ss_pred Ccc-----------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccC
Q 030483 56 ALV-----------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKE 124 (176)
Q Consensus 56 ~~v-----------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E 124 (176)
+.| .+.+.+.++.++.||.|++++|.+. . .|+|||++||+++.... ++.......++|
T Consensus 80 dgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~---~-sVkrvV~TSS~aAv~~~-------~~~~~~~~vvdE 148 (327)
T KOG1502|consen 80 DGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKT---K-SVKRVVYTSSTAAVRYN-------GPNIGENSVVDE 148 (327)
T ss_pred CEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhcc---C-CcceEEEeccHHHhccC-------CcCCCCCccccc
Confidence 000 1123478999999999999999998 3 69999999998765422 111113457788
Q ss_pred CCCCCC----CCcchHHHHHHHHh-------hCCCceEEEeccCceEeCCCCC
Q 030483 125 DSSRLP----FPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASPRS 166 (176)
Q Consensus 125 ~~~~~~----~~~~y~~~e~~~~~-------~~~g~~~~ivRp~~v~G~~~~~ 166 (176)
+.=..+ ....+|...|.+.| .+.+++.+++.|+.|+||....
T Consensus 149 ~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~ 201 (327)
T KOG1502|consen 149 ESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQP 201 (327)
T ss_pred ccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCccc
Confidence 762210 01234544444433 4668999999999999998744
No 6
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=99.84 E-value=7e-21 Score=151.74 Aligned_cols=139 Identities=18% Similarity=0.221 Sum_probs=112.4
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCCCC----------C-c-c-----------cCcHHHHHH
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPT----------A-L-V-----------QESEEVNIF 67 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~----------~-~-v-----------~~~~~~~~~ 67 (176)
++||||++|++|++|+++|. .+++|++++|...+....+ + . | ..+++..+.
T Consensus 2 ~iLi~G~~GqLG~~L~~~l~------~~~~v~a~~~~~~Ditd~~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~ 75 (281)
T COG1091 2 KILITGANGQLGTELRRALP------GEFEVIATDRAELDITDPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFA 75 (281)
T ss_pred cEEEEcCCChHHHHHHHHhC------CCceEEeccCccccccChHHHHHHHHhhCCCEEEECccccccccccCCHHHHHH
Confidence 49999999999999999997 6799999999886543211 1 1 1 335677899
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHHHHHHHh---
Q 030483 68 KNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS--- 144 (176)
Q Consensus 68 ~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~--- 144 (176)
+|..++.|++++|.+. + ..+|++|| ||||.|.. ..||.|+|+.. |..+|+.+|++.|
T Consensus 76 vNa~~~~~lA~aa~~~-----g-a~lVhiST---------DyVFDG~~---~~~Y~E~D~~~--P~nvYG~sKl~GE~~v 135 (281)
T COG1091 76 VNATGAENLARAAAEV-----G-ARLVHIST---------DYVFDGEK---GGPYKETDTPN--PLNVYGRSKLAGEEAV 135 (281)
T ss_pred hHHHHHHHHHHHHHHh-----C-CeEEEeec---------ceEecCCC---CCCCCCCCCCC--ChhhhhHHHHHHHHHH
Confidence 9999999999999998 3 35788886 77777863 57999999865 6778999999987
Q ss_pred hCCCceEEEeccCceEeCCCCCCCCCCCCCC
Q 030483 145 YSPAITYSVHRSSVIIGASPRSLYXXXXXXX 175 (176)
Q Consensus 145 ~~~g~~~~ivRp~~v~G~~~~~~~~~~~~~~ 175 (176)
+..+-+.+|+|.+|+||..++||...|++++
T Consensus 136 ~~~~~~~~I~Rtswv~g~~g~nFv~tml~la 166 (281)
T COG1091 136 RAAGPRHLILRTSWVYGEYGNNFVKTMLRLA 166 (281)
T ss_pred HHhCCCEEEEEeeeeecCCCCCHHHHHHHHh
Confidence 5667889999999999999888887777665
No 7
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=99.84 E-value=5.7e-20 Score=153.10 Aligned_cols=146 Identities=18% Similarity=0.189 Sum_probs=98.2
Q ss_pred CCcCCCCC--CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------CC--C-------------
Q 030483 1 MEKQDQNP--KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------WF--P------------- 54 (176)
Q Consensus 1 ~~~~~~~~--~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~~--~------------- 54 (176)
|++...++ +|+|||||||||||++|+++|. ++||+|++++|..... +. .
T Consensus 11 ~~~~~~~~~~~~~IlVtGgtGfIG~~l~~~L~-----~~G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 85 (370)
T PLN02695 11 LEREPYWPSEKLRICITGAGGFIASHIARRLK-----AEGHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTKG 85 (370)
T ss_pred cCCCCCCCCCCCEEEEECCccHHHHHHHHHHH-----hCCCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHhC
Confidence 33444443 5899999999999999999999 6899999999854211 00 0
Q ss_pred CCcc-------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCcc
Q 030483 55 TALV-------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVP 121 (176)
Q Consensus 55 ~~~v-------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p 121 (176)
.+.| ..++...+..|+.++.|++++|++. ++++|+++||+.+|+... ... ...+
T Consensus 86 ~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~-----~vk~~V~~SS~~vYg~~~----~~~----~~~~ 152 (370)
T PLN02695 86 VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARIN-----GVKRFFYASSACIYPEFK----QLE----TNVS 152 (370)
T ss_pred CCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHh-----CCCEEEEeCchhhcCCcc----ccC----cCCC
Confidence 0111 0123445678999999999999887 678999999999998421 000 1235
Q ss_pred ccCCCCCCCCCcchHHH-----HHHHHh--hCCCceEEEeccCceEeCCC
Q 030483 122 FKEDSSRLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 122 ~~E~~~~~~~~~~y~~~-----e~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
++|+++....|...|.. |.++.. +..+++++++||++||||+.
T Consensus 153 ~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~ 202 (370)
T PLN02695 153 LKESDAWPAEPQDAYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFG 202 (370)
T ss_pred cCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCC
Confidence 66765211123333443 333332 35689999999999999974
No 8
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.84 E-value=8.3e-20 Score=147.23 Aligned_cols=132 Identities=17% Similarity=0.157 Sum_probs=95.4
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC--------C-----C----------C-Ccc--------
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------F-----P----------T-ALV-------- 58 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~--------~-----~----------~-~~v-------- 58 (176)
+|||||||||||++|+++|+ ++||+|++++|...... . . . +.|
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~~ 76 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLL-----AAGHDVRGLDRLRDGLDPLLSGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQSS 76 (314)
T ss_pred eEEEEcCcccHHHHHHHHHH-----hCCCeEEEEeCCCccccccccccceeeecccchHHHHHHHhcCCCEEEEccccCc
Confidence 49999999999999999999 68999999998654311 0 0 0 112
Q ss_pred -c---C-cHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCC-CCCCCCC
Q 030483 59 -Q---E-SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKED-SSRLPFP 132 (176)
Q Consensus 59 -~---~-~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~-~~~~~~~ 132 (176)
. . ++.+.+++|+.++.|++++|++. ++++|++.||..+|+... ...+++|+ .+.. |
T Consensus 77 ~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~-----~~~~~v~~ss~~~~~~~~-----------~~~~~~E~~~~~~--p 138 (314)
T COG0451 77 VPDSNASDPAEFLDVNVDGTLNLLEAARAA-----GVKRFVFASSVSVVYGDP-----------PPLPIDEDLGPPR--P 138 (314)
T ss_pred hhhhhhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCeEEEeCCCceECCCC-----------CCCCcccccCCCC--C
Confidence 1 1 23457899999999999999986 688999988777776321 13478888 4433 2
Q ss_pred cchHHHHHHHHh-------hCCCceEEEeccCceEeCCCC
Q 030483 133 NFYYELEDVSAS-------YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 133 ~~y~~~e~~~~~-------~~~g~~~~ivRp~~v~G~~~~ 165 (176)
...|...|+..| +..+++++++||++||||+..
T Consensus 139 ~~~Yg~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~ 178 (314)
T COG0451 139 LNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDK 178 (314)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCC
Confidence 224554444433 346899999999999999974
No 9
>PLN02214 cinnamoyl-CoA reductase
Probab=99.83 E-value=1.3e-19 Score=149.34 Aligned_cols=139 Identities=15% Similarity=0.173 Sum_probs=97.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-------C----CCC--------------------C
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------W----FPT--------------------A 56 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~----~~~--------------------~ 56 (176)
++++||||||+||||++|+++|+ ++||+|++++|+.... . ... +
T Consensus 9 ~~~~vlVTGatGfIG~~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d 83 (342)
T PLN02214 9 AGKTVCVTGAGGYIASWIVKILL-----ERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCD 83 (342)
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----HCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCC
Confidence 45789999999999999999999 7999999999864310 0 000 0
Q ss_pred cc-------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccc-eeecccccCCCccCCCCCCCccccCCCCC
Q 030483 57 LV-------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT-KHYMGPIFDPSLAGQLMPYEVPFKEDSSR 128 (176)
Q Consensus 57 ~v-------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~-~~yg~~~~d~~~~g~~~~~~~p~~E~~~~ 128 (176)
.| ..++.+.+++|+.++.+++++|.+. ++++|+++||. ++||.+. +. ...+++|++..
T Consensus 84 ~Vih~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~-----~v~r~V~~SS~~avyg~~~------~~---~~~~~~E~~~~ 149 (342)
T PLN02214 84 GVFHTASPVTDDPEQMVEPAVNGAKFVINAAAEA-----KVKRVVITSSIGAVYMDPN------RD---PEAVVDESCWS 149 (342)
T ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHhc-----CCCEEEEeccceeeeccCC------CC---CCcccCcccCC
Confidence 01 3356778899999999999999987 57899999985 5887431 00 11357787521
Q ss_pred C----CCCcchHHHHHHHH-----h--hCCCceEEEeccCceEeCCCC
Q 030483 129 L----PFPNFYYELEDVSA-----S--YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 129 ~----~~~~~y~~~e~~~~-----~--~~~g~~~~ivRp~~v~G~~~~ 165 (176)
. ..+...|...|+.. + +..+++++++||++||||+..
T Consensus 150 ~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~ 197 (342)
T PLN02214 150 DLDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQ 197 (342)
T ss_pred ChhhccccccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCC
Confidence 1 11333454444333 3 356899999999999999863
No 10
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=99.83 E-value=4.6e-20 Score=156.68 Aligned_cols=131 Identities=17% Similarity=0.136 Sum_probs=94.3
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-------C--C---------------CCCcc------
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------W--F---------------PTALV------ 58 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~--~---------------~~~~v------ 58 (176)
.|+|||||||||||++|+++|+ ++|++|++++|..... . . +.+.|
T Consensus 120 ~mkILVTGatGFIGs~Lv~~Ll-----~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~D~ViHlAa~ 194 (436)
T PLN02166 120 RLRIVVTGGAGFVGSHLVDKLI-----GRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPILLEVDQIYHLACP 194 (436)
T ss_pred CCEEEEECCccHHHHHHHHHHH-----HCCCEEEEEeCCCCccHhHhhhhccCCceEEEECccccccccCCCEEEECcee
Confidence 3689999999999999999999 6899999998742110 0 0 00111
Q ss_pred ------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCC-----C
Q 030483 59 ------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDS-----S 127 (176)
Q Consensus 59 ------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~-----~ 127 (176)
..++.+.+++|+.+|.+++++|++. ++ ++|++||..+||.+. ..|++|++ |
T Consensus 195 ~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~-----g~-r~V~~SS~~VYg~~~------------~~p~~E~~~~~~~p 256 (436)
T PLN02166 195 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-----GA-RFLLTSTSEVYGDPL------------EHPQKETYWGNVNP 256 (436)
T ss_pred ccchhhccCHHHHHHHHHHHHHHHHHHHHHh-----CC-EEEEECcHHHhCCCC------------CCCCCccccccCCC
Confidence 1245677899999999999999987 33 799999999998431 24666763 3
Q ss_pred CCCCCcchHH-----HHHHHHh--hCCCceEEEeccCceEeCCC
Q 030483 128 RLPFPNFYYE-----LEDVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 128 ~~~~~~~y~~-----~e~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
.. |...|. .|+++.+ +..+++++++||++||||+.
T Consensus 257 ~~--p~s~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~ 298 (436)
T PLN02166 257 IG--ERSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRM 298 (436)
T ss_pred CC--CCCchHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCC
Confidence 22 222333 3444443 35689999999999999985
No 11
>PLN00198 anthocyanidin reductase; Provisional
Probab=99.83 E-value=1e-19 Score=149.32 Aligned_cols=147 Identities=21% Similarity=0.185 Sum_probs=98.8
Q ss_pred CCcCCCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC--------C---CC---------C-----
Q 030483 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------W---FP---------T----- 55 (176)
Q Consensus 1 ~~~~~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~---~~---------~----- 55 (176)
|....|+++++||||||+||||++|+++|+ +.|++|++++|+.... . .. +
T Consensus 1 ~~~~~~~~~~~vlItG~~GfIG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~ 75 (338)
T PLN00198 1 MATLTPTGKKTACVIGGTGFLASLLIKLLL-----QKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFE 75 (338)
T ss_pred CCcccCCCCCeEEEECCchHHHHHHHHHHH-----HCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHH
Confidence 455567778999999999999999999999 6899999888764210 0 00 0
Q ss_pred ------Ccc----------cCcHH-HHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCC
Q 030483 56 ------ALV----------QESEE-VNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPY 118 (176)
Q Consensus 56 ------~~v----------~~~~~-~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~ 118 (176)
+.| ..++. ..+++|+.++.++++++.+. . ++++|+++||.++|+... ..+ .
T Consensus 76 ~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~---~-~~~~~v~~SS~~~~g~~~----~~~----~ 143 (338)
T PLN00198 76 APIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKA---K-SVKRVILTSSAAAVSINK----LSG----T 143 (338)
T ss_pred HHHhcCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhc---C-CccEEEEeecceeeeccC----CCC----C
Confidence 001 12232 45789999999999999876 2 478999999999997421 001 1
Q ss_pred CccccCCCCC-------CCCCcchHHH-----HHHHHh--hCCCceEEEeccCceEeCCC
Q 030483 119 EVPFKEDSSR-------LPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 119 ~~p~~E~~~~-------~~~~~~y~~~-----e~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
..|++|+... ...|...|.. |.++.+ +.++++++++||++||||+.
T Consensus 144 ~~~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~ 203 (338)
T PLN00198 144 GLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSL 203 (338)
T ss_pred CceeccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCc
Confidence 2345554210 0123333433 333333 35689999999999999985
No 12
>PLN02427 UDP-apiose/xylose synthase
Probab=99.83 E-value=1.3e-19 Score=151.34 Aligned_cols=140 Identities=19% Similarity=0.200 Sum_probs=90.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCC-CcEEEEEecCCCC----------CCC-C--------------------C
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGS-PWKVYGAARRPPP----------GWF-P--------------------T 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~-g~~V~~l~R~~~~----------~~~-~--------------------~ 55 (176)
..|+|||||||||||++|+++|+ ++ |++|++++|+... .+. . .
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~-----~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~ 87 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLM-----TETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMA 87 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHH-----hcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcC
Confidence 34689999999999999999999 55 6999999986421 000 0 0
Q ss_pred Ccc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccc-
Q 030483 56 ALV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPF- 122 (176)
Q Consensus 56 ~~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~- 122 (176)
+.| ..++.+.+..|+.++.+++++|++. + ++|+++||..+||....++. . +..|+
T Consensus 88 d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~-----~-~r~v~~SS~~vYg~~~~~~~--~----e~~p~~ 155 (386)
T PLN02427 88 DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN-----N-KRLIHFSTCEVYGKTIGSFL--P----KDHPLR 155 (386)
T ss_pred CEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhc-----C-CEEEEEeeeeeeCCCcCCCC--C----cccccc
Confidence 111 1123456678999999999999876 3 68999999999984321000 0 11222
Q ss_pred --------cCCCCCC---C--CCcchHHHHH-----HHHh--hCCCceEEEeccCceEeCCC
Q 030483 123 --------KEDSSRL---P--FPNFYYELED-----VSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 123 --------~E~~~~~---~--~~~~y~~~e~-----~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
+|+.+.. + .+.+.|...| ++.+ +.++++++++||++||||+.
T Consensus 156 ~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~ 217 (386)
T PLN02427 156 QDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRM 217 (386)
T ss_pred cccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCC
Confidence 2222111 0 1122344333 3332 35689999999999999974
No 13
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=99.83 E-value=1.3e-19 Score=149.34 Aligned_cols=134 Identities=17% Similarity=0.265 Sum_probs=93.6
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-----CC-------C---C-----------Ccc-----
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----WF-------P---T-----------ALV----- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~~-------~---~-----------~~v----- 58 (176)
|+|||||||||||++|+++|++ ..||+|++++|+.... .. . + +.|
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~----~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa 77 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILE----TTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLVA 77 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHh----CCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECcc
Confidence 5799999999999999999993 3479999999864210 00 0 0 111
Q ss_pred -------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCC--
Q 030483 59 -------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRL-- 129 (176)
Q Consensus 59 -------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~-- 129 (176)
..++...+++|+.++.+++++|++. + ++++++||+.+||... ..+++|+++..
T Consensus 78 ~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~-----~-~~~v~~SS~~vyg~~~------------~~~~~ee~~~~~~ 139 (347)
T PRK11908 78 IATPATYVKQPLRVFELDFEANLPIVRSAVKY-----G-KHLVFPSTSEVYGMCP------------DEEFDPEASPLVY 139 (347)
T ss_pred cCChHHhhcCcHHHHHHHHHHHHHHHHHHHhc-----C-CeEEEEecceeeccCC------------CcCcCcccccccc
Confidence 1234567889999999999999886 4 6899999999998321 23556654311
Q ss_pred -C--CCcchHHHHHHHHh-------hCCCceEEEeccCceEeCCCC
Q 030483 130 -P--FPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 130 -~--~~~~y~~~e~~~~~-------~~~g~~~~ivRp~~v~G~~~~ 165 (176)
| .|...|...|...| ..++++++++||+++|||+..
T Consensus 140 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~ 185 (347)
T PRK11908 140 GPINKPRWIYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLD 185 (347)
T ss_pred CcCCCccchHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCcc
Confidence 1 23334555444433 357899999999999999853
No 14
>PLN02572 UDP-sulfoquinovose synthase
Probab=99.82 E-value=1.4e-19 Score=154.08 Aligned_cols=139 Identities=19% Similarity=0.116 Sum_probs=89.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC---CCC---------------------------C--CC-C
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR---PPP---------------------------G--WF-P 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~---~~~---------------------------~--~~-~ 54 (176)
++|+||||||+||||+||+++|+ ++|++|++++|. ... . +. .
T Consensus 46 ~~k~VLVTGatGfIGs~Lv~~L~-----~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~ 120 (442)
T PLN02572 46 KKKKVMVIGGDGYCGWATALHLS-----KRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVG 120 (442)
T ss_pred cCCEEEEECCCcHHHHHHHHHHH-----HCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEEC
Confidence 35789999999999999999999 789999998642 100 0 00 0
Q ss_pred C----------------Ccc------------cCc---HHHHHHHHHHHHHHHHHHHHhcCCCCCCcc-EEEEeccceee
Q 030483 55 T----------------ALV------------QES---EEVNIFKNSTMLKNVLSVLVSSNSGRSRLR-HVALLTGTKHY 102 (176)
Q Consensus 55 ~----------------~~v------------~~~---~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~-~vv~~Ss~~~y 102 (176)
+ +.| ..+ +...+++|+.++.|++++|++. +++ +|+++||..+|
T Consensus 121 Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~-----gv~~~~V~~SS~~vY 195 (442)
T PLN02572 121 DICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEF-----APDCHLVKLGTMGEY 195 (442)
T ss_pred CCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHh-----CCCccEEEEecceec
Confidence 0 011 011 1234689999999999999987 454 89999999999
Q ss_pred cccccCCCccCCCCCCCcccc------CCCCC-CCCCcchHHHHHHH-----Hh--hCCCceEEEeccCceEeCCC
Q 030483 103 MGPIFDPSLAGQLMPYEVPFK------EDSSR-LPFPNFYYELEDVS-----AS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 103 g~~~~d~~~~g~~~~~~~p~~------E~~~~-~~~~~~y~~~e~~~-----~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
|.+.. ... ..+++ |+++. ...|...|+..|+. .. +.++++++++||++||||+.
T Consensus 196 G~~~~---~~~-----E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~ 263 (442)
T PLN02572 196 GTPNI---DIE-----EGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRT 263 (442)
T ss_pred CCCCC---CCc-----ccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCC
Confidence 84310 000 01111 23211 11233334433333 32 45699999999999999985
No 15
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=99.82 E-value=1.1e-19 Score=143.42 Aligned_cols=134 Identities=19% Similarity=0.137 Sum_probs=98.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC------CCCCCC--------cc---------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP------GWFPTA--------LV--------------- 58 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~------~~~~~~--------~v--------------- 58 (176)
..++|+||||.||||||||+.|+ .+|++|++++.-... .|...+ .+
T Consensus 26 ~~lrI~itGgaGFIgSHLvdkLm-----~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~pl~~evD~IyhLAa 100 (350)
T KOG1429|consen 26 QNLRILITGGAGFIGSHLVDKLM-----TEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEPLLKEVDQIYHLAA 100 (350)
T ss_pred CCcEEEEecCcchHHHHHHHHHH-----hcCCeEEEEecccccchhhcchhccCcceeEEEeechhHHHHHhhhhhhhcc
Confidence 35799999999999999999999 799999999864321 121111 00
Q ss_pred -------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCC--
Q 030483 59 -------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRL-- 129 (176)
Q Consensus 59 -------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~-- 129 (176)
.-++-..+..|..++.|++..|++. + +||+++|+++|||.|. ..|..|+.-..
T Consensus 101 pasp~~y~~npvktIktN~igtln~lglakrv-----~-aR~l~aSTseVYgdp~------------~hpq~e~ywg~vn 162 (350)
T KOG1429|consen 101 PASPPHYKYNPVKTIKTNVIGTLNMLGLAKRV-----G-ARFLLASTSEVYGDPL------------VHPQVETYWGNVN 162 (350)
T ss_pred CCCCcccccCccceeeecchhhHHHHHHHHHh-----C-ceEEEeecccccCCcc------------cCCCccccccccC
Confidence 2244566788999999999999887 3 7899999999999653 45666665221
Q ss_pred -CCCcchHHHHHHHHh-------hCCCceEEEeccCceEeCCC
Q 030483 130 -PFPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 130 -~~~~~y~~~e~~~~~-------~~~g~~~~ivRp~~v~G~~~ 164 (176)
..|..-|..+|.+.| ++.|+.+.|.|+++.|||++
T Consensus 163 pigpr~cydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm 205 (350)
T KOG1429|consen 163 PIGPRSCYDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRM 205 (350)
T ss_pred cCCchhhhhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCcc
Confidence 133444554444443 57899999999999999997
No 16
>PLN02650 dihydroflavonol-4-reductase
Probab=99.81 E-value=3e-19 Score=147.28 Aligned_cols=137 Identities=12% Similarity=0.155 Sum_probs=92.7
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------C---CC---------C-----------C
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------W---FP---------T-----------A 56 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~---~~---------~-----------~ 56 (176)
+++||||||+||||++|+++|+ +.|++|++++|+.... . .. + +
T Consensus 5 ~k~iLVTGatGfIGs~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d 79 (351)
T PLN02650 5 KETVCVTGASGFIGSWLVMRLL-----ERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCT 79 (351)
T ss_pred CCEEEEeCCcHHHHHHHHHHHH-----HCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCC
Confidence 4789999999999999999999 6899999998864221 0 00 0 0
Q ss_pred cc----------cCcH-HHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCcc-ccC
Q 030483 57 LV----------QESE-EVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVP-FKE 124 (176)
Q Consensus 57 ~v----------~~~~-~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p-~~E 124 (176)
.| ..++ .+.+++|+.++.+++++|.+. . .+++|+++||..+|+... ...| ++|
T Consensus 80 ~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~---~-~~~r~v~~SS~~~~~~~~-----------~~~~~~~E 144 (351)
T PLN02650 80 GVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKA---K-TVRRIVFTSSAGTVNVEE-----------HQKPVYDE 144 (351)
T ss_pred EEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhc---C-CceEEEEecchhhcccCC-----------CCCCccCc
Confidence 01 1122 367899999999999999886 2 368999999987775321 0122 455
Q ss_pred CCCC-------CCCCcchHHHHHHH-----Hh--hCCCceEEEeccCceEeCCCC
Q 030483 125 DSSR-------LPFPNFYYELEDVS-----AS--YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 125 ~~~~-------~~~~~~y~~~e~~~-----~~--~~~g~~~~ivRp~~v~G~~~~ 165 (176)
++.. .+.+...|...|.. .+ +.++++++++||++||||+..
T Consensus 145 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~ 199 (351)
T PLN02650 145 DCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFIS 199 (351)
T ss_pred ccCCchhhhhccccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCC
Confidence 5311 01122234443333 33 367999999999999999753
No 17
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=99.81 E-value=1e-19 Score=141.11 Aligned_cols=128 Identities=23% Similarity=0.273 Sum_probs=97.6
Q ss_pred EEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC-----C---------C-------------Ccc-----c
Q 030483 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-----P---------T-------------ALV-----Q 59 (176)
Q Consensus 12 vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~-----~---------~-------------~~v-----~ 59 (176)
|||||||||||++|+++|+ .+|++|+.+.|+...... . + +.| .
T Consensus 1 IlI~GatG~iG~~l~~~l~-----~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~ 75 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLL-----KKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAF 75 (236)
T ss_dssp EEEETTTSHHHHHHHHHHH-----HTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSS
T ss_pred EEEEccCCHHHHHHHHHHH-----HcCCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeecc
Confidence 7999999999999999999 799999999998764310 0 0 111 1
Q ss_pred -------CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCC
Q 030483 60 -------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFP 132 (176)
Q Consensus 60 -------~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~ 132 (176)
.+..+.++.|+.++.+++++|.+. ++++++++||..+|+.+ ...|++|+++.. |
T Consensus 76 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-----~~~~~i~~sS~~~y~~~------------~~~~~~e~~~~~--~ 136 (236)
T PF01370_consen 76 SSNPESFEDPEEIIEANVQGTRNLLEAAREA-----GVKRFIFLSSASVYGDP------------DGEPIDEDSPIN--P 136 (236)
T ss_dssp SSHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-----TTSEEEEEEEGGGGTSS------------SSSSBETTSGCC--H
T ss_pred ccccccccccccccccccccccccccccccc-----ccccccccccccccccc------------cccccccccccc--c
Confidence 134567889999999999999998 56899999999999843 146789998763 3
Q ss_pred cchHHH-----HHHHHh--hCCCceEEEeccCceEeCC
Q 030483 133 NFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 133 ~~y~~~-----e~~~~~--~~~g~~~~ivRp~~v~G~~ 163 (176)
...|.. |+++.+ +..+++++++||++||||.
T Consensus 137 ~~~Y~~~K~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~ 174 (236)
T PF01370_consen 137 LSPYGASKRAAEELLRDYAKKYGLRVTILRPPNVYGPG 174 (236)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHTSEEEEEEESEEESTT
T ss_pred cccccccccccccccccccccccccccccccccccccc
Confidence 333443 333333 3458999999999999999
No 18
>PLN02206 UDP-glucuronate decarboxylase
Probab=99.81 E-value=3e-19 Score=151.93 Aligned_cols=133 Identities=15% Similarity=0.089 Sum_probs=93.6
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-------C--C---------------CCCcc------
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------W--F---------------PTALV------ 58 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~--~---------------~~~~v------ 58 (176)
.|+|||||||||||++|+++|+ ++|++|++++|..... . . ..+.|
T Consensus 119 ~~kILVTGatGfIGs~Lv~~Ll-----~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~l~~~D~ViHlAa~ 193 (442)
T PLN02206 119 GLRVVVTGGAGFVGSHLVDRLM-----ARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEPILLEVDQIYHLACP 193 (442)
T ss_pred CCEEEEECcccHHHHHHHHHHH-----HCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccChhhcCCCEEEEeeee
Confidence 4789999999999999999999 7899999998642110 0 0 00111
Q ss_pred ------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCC--CC
Q 030483 59 ------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSR--LP 130 (176)
Q Consensus 59 ------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~--~~ 130 (176)
..++.+.+++|+.++.|++++|++. ++ +++++||+.+||... ..|.+|+... .|
T Consensus 194 ~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~-----g~-r~V~~SS~~VYg~~~------------~~p~~E~~~~~~~P 255 (442)
T PLN02206 194 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-----GA-RFLLTSTSEVYGDPL------------QHPQVETYWGNVNP 255 (442)
T ss_pred cchhhhhcCHHHHHHHHHHHHHHHHHHHHHh-----CC-EEEEECChHHhCCCC------------CCCCCccccccCCC
Confidence 1245678899999999999999987 44 799999999997431 2456666411 11
Q ss_pred -CCcchHHH-----HHHHHh--hCCCceEEEeccCceEeCCC
Q 030483 131 -FPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 131 -~~~~y~~~-----e~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
.+...|.. |+++.+ +.++++++++||+++|||+.
T Consensus 256 ~~~~s~Y~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~ 297 (442)
T PLN02206 256 IGVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRM 297 (442)
T ss_pred CCccchHHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCC
Confidence 12223433 444433 35689999999999999974
No 19
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=99.80 E-value=4.4e-19 Score=157.61 Aligned_cols=135 Identities=17% Similarity=0.205 Sum_probs=96.1
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-----CCC---------C------------Ccc----
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----WFP---------T------------ALV---- 58 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~---------~------------~~v---- 58 (176)
.|+|||||||||||+||+++|++ ..||+|++++|..... ... + +.|
T Consensus 315 ~~~VLVTGatGFIGs~Lv~~Ll~----~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHlA 390 (660)
T PRK08125 315 RTRVLILGVNGFIGNHLTERLLR----DDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLV 390 (660)
T ss_pred CCEEEEECCCchHHHHHHHHHHh----CCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhcCCCEEEECc
Confidence 47899999999999999999993 3579999999865321 000 0 011
Q ss_pred --------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCC--
Q 030483 59 --------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSR-- 128 (176)
Q Consensus 59 --------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~-- 128 (176)
..++.+.+++|+.++.+++++|++. + ++|+++||..+||.. ...+++|+++.
T Consensus 391 a~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~-----~-~~~V~~SS~~vyg~~------------~~~~~~E~~~~~~ 452 (660)
T PRK08125 391 AIATPIEYTRNPLRVFELDFEENLKIIRYCVKY-----N-KRIIFPSTSEVYGMC------------TDKYFDEDTSNLI 452 (660)
T ss_pred cccCchhhccCHHHHHHhhHHHHHHHHHHHHhc-----C-CeEEEEcchhhcCCC------------CCCCcCccccccc
Confidence 1234567889999999999999987 4 689999999999832 13467787643
Q ss_pred -CC--CCcchHHHHHH-----HHh--hCCCceEEEeccCceEeCCCC
Q 030483 129 -LP--FPNFYYELEDV-----SAS--YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 129 -~~--~~~~y~~~e~~-----~~~--~~~g~~~~ivRp~~v~G~~~~ 165 (176)
.| .|...|...|. +.. +.++++++++||++||||+..
T Consensus 453 ~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~ 499 (660)
T PRK08125 453 VGPINKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLD 499 (660)
T ss_pred cCCCCCCccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCcc
Confidence 11 12333444443 333 356899999999999999853
No 20
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=99.80 E-value=1.2e-18 Score=142.09 Aligned_cols=141 Identities=17% Similarity=0.146 Sum_probs=97.2
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC--------C----CC---------C-----------C
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------W----FP---------T-----------A 56 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~----~~---------~-----------~ 56 (176)
+|++|||||+||||++|+++|+ ++|++|++++|+.... . .. + +
T Consensus 5 ~k~vlVtG~~G~IG~~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d 79 (325)
T PLN02989 5 GKVVCVTGASGYIASWIVKLLL-----FRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCE 79 (325)
T ss_pred CCEEEEECCchHHHHHHHHHHH-----HCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCC
Confidence 5799999999999999999999 7999999888764321 0 00 0 0
Q ss_pred cc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccC
Q 030483 57 LV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKE 124 (176)
Q Consensus 57 ~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E 124 (176)
.| .+++.+.+++|+.++.++++++.+. . ++++|+++||..+|+++.. ..+ ...+++|
T Consensus 80 ~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~---~-~~~~iv~~SS~~~~~~~~~---~~~----~~~~~~E 148 (325)
T PLN02989 80 TVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKV---S-SVKRVILTSSMAAVLAPET---KLG----PNDVVDE 148 (325)
T ss_pred EEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHc---C-CceEEEEecchhheecCCc---cCC----CCCccCc
Confidence 01 1234567899999999999999875 2 4678999999888764310 001 1346788
Q ss_pred CCCCCCC----CcchHHH-----HHHHHh--hCCCceEEEeccCceEeCCCC
Q 030483 125 DSSRLPF----PNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 125 ~~~~~~~----~~~y~~~-----e~~~~~--~~~g~~~~ivRp~~v~G~~~~ 165 (176)
+++..|. +...|.. |.++.. +.++++++++||+++|||+..
T Consensus 149 ~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~ 200 (325)
T PLN02989 149 TFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQ 200 (325)
T ss_pred CCCCchhHhcccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCC
Confidence 8765431 1223433 333333 356899999999999999864
No 21
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=99.80 E-value=6.2e-19 Score=141.12 Aligned_cols=129 Identities=16% Similarity=0.150 Sum_probs=96.3
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC---------CC--Ccc------------cCcHHHHHH
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF---------PT--ALV------------QESEEVNIF 67 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~---------~~--~~v------------~~~~~~~~~ 67 (176)
+|||||||||||++|+++|+ +.||+|++++|+..+... .. +.| ...+.+.++
T Consensus 1 kilv~G~tG~iG~~l~~~l~-----~~g~~v~~~~r~~~d~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~ 75 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLS-----PEGRVVVALTSSQLDLTDPEALERLLRAIRPDAVVNTAAYTDVDGAESDPEKAFA 75 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHH-----hcCCEEEEeCCcccCCCCHHHHHHHHHhCCCCEEEECCccccccccccCHHHHHH
Confidence 58999999999999999999 689999999997443211 00 111 123456789
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHHHHHHHh---
Q 030483 68 KNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS--- 144 (176)
Q Consensus 68 ~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~--- 144 (176)
+|+.++.++++++.+. ++ +++++||..+|+.. ...|++|+++.. +...|...|...|
T Consensus 76 ~n~~~~~~l~~~~~~~-----~~-~~v~~Ss~~vy~~~------------~~~~~~E~~~~~--~~~~Y~~~K~~~E~~~ 135 (287)
T TIGR01214 76 VNALAPQNLARAAARH-----GA-RLVHISTDYVFDGE------------GKRPYREDDATN--PLNVYGQSKLAGEQAI 135 (287)
T ss_pred HHHHHHHHHHHHHHHc-----CC-eEEEEeeeeeecCC------------CCCCCCCCCCCC--CcchhhHHHHHHHHHH
Confidence 9999999999999887 33 79999999999742 145788988754 3344555554444
Q ss_pred hCCCceEEEeccCceEeCCC
Q 030483 145 YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 145 ~~~g~~~~ivRp~~v~G~~~ 164 (176)
+..+++++++||++||||..
T Consensus 136 ~~~~~~~~ilR~~~v~G~~~ 155 (287)
T TIGR01214 136 RAAGPNALIVRTSWLYGGGG 155 (287)
T ss_pred HHhCCCeEEEEeeecccCCC
Confidence 34578999999999999985
No 22
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=99.80 E-value=2.4e-18 Score=140.21 Aligned_cols=140 Identities=16% Similarity=0.078 Sum_probs=95.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------C---CC--------------------C
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------W---FP--------------------T 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~---~~--------------------~ 55 (176)
.+++||||||+||||++|+++|+ +.||+|+++.|+.... . .. .
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 78 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLL-----LRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGC 78 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCC
Confidence 35799999999999999999999 7899999998865321 0 00 0
Q ss_pred Ccc----------cCcH-HHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeec--ccccCCCccCCCCCCCccc
Q 030483 56 ALV----------QESE-EVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYM--GPIFDPSLAGQLMPYEVPF 122 (176)
Q Consensus 56 ~~v----------~~~~-~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg--~~~~d~~~~g~~~~~~~p~ 122 (176)
+.| ..++ .+.+++|+.++.++++++++. .++++||++||..+|. .+. .. ...++
T Consensus 79 d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~----~~v~rvV~~SS~~~~~~~~~~-----~~----~~~~~ 145 (322)
T PLN02986 79 DAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKET----PSVKRVILTSSTAAVLFRQPP-----IE----ANDVV 145 (322)
T ss_pred CEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhc----CCccEEEEecchhheecCCcc-----CC----CCCCc
Confidence 001 1122 346889999999999999875 2578999999987653 110 00 12457
Q ss_pred cCCCCCCC----CCcchHHHHHHH-----Hh--hCCCceEEEeccCceEeCCCC
Q 030483 123 KEDSSRLP----FPNFYYELEDVS-----AS--YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 123 ~E~~~~~~----~~~~y~~~e~~~-----~~--~~~g~~~~ivRp~~v~G~~~~ 165 (176)
+|++...| .+...|...|.. .+ +.++++++++||++||||...
T Consensus 146 ~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~ 199 (322)
T PLN02986 146 DETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQ 199 (322)
T ss_pred CcccCCChHHhhccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCC
Confidence 77764322 122334443333 33 356899999999999999753
No 23
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=99.79 E-value=7.1e-19 Score=145.04 Aligned_cols=136 Identities=23% Similarity=0.190 Sum_probs=96.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC---------CCC----------------------C
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------FPT----------------------A 56 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~---------~~~----------------------~ 56 (176)
++|+||||||+||||++|+++|+ +.|++|++++|+..... ... +
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d 77 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLL-----ELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPE 77 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHH-----HCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCC
Confidence 45899999999999999999999 78999999998654210 000 0
Q ss_pred cc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccC
Q 030483 57 LV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKE 124 (176)
Q Consensus 57 ~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E 124 (176)
.| ..++...+++|+.++.++++++.+. + .+++++++||+.+|+.+. ...|++|
T Consensus 78 ~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~---~-~~~~iv~~SS~~vyg~~~-----------~~~~~~e 142 (349)
T TIGR02622 78 IVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAI---G-SVKAVVNVTSDKCYRNDE-----------WVWGYRE 142 (349)
T ss_pred EEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhc---C-CCCEEEEEechhhhCCCC-----------CCCCCcc
Confidence 11 2245667899999999999999876 2 367999999999997421 1246777
Q ss_pred CCCCCCCCcchH----HHHHHHHh--hC-------CCceEEEeccCceEeCCC
Q 030483 125 DSSRLPFPNFYY----ELEDVSAS--YS-------PAITYSVHRSSVIIGASP 164 (176)
Q Consensus 125 ~~~~~~~~~~y~----~~e~~~~~--~~-------~g~~~~ivRp~~v~G~~~ 164 (176)
+++..| ...|. ..|.++.. .. .+++++++||++||||+.
T Consensus 143 ~~~~~p-~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~ 194 (349)
T TIGR02622 143 TDPLGG-HDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGD 194 (349)
T ss_pred CCCCCC-CCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCc
Confidence 766442 13332 23444432 11 389999999999999974
No 24
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=99.79 E-value=2.7e-19 Score=144.37 Aligned_cols=135 Identities=21% Similarity=0.240 Sum_probs=96.8
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCCC-----------CCcc------------cCcHHHHH
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFP-----------TALV------------QESEEVNI 66 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~-----------~~~v------------~~~~~~~~ 66 (176)
||||||||+||||++|.++|. ..||+|+++.|...+.... -+.| ..+++..+
T Consensus 1 MriLI~GasG~lG~~l~~~l~-----~~~~~v~~~~r~~~dl~d~~~~~~~~~~~~pd~Vin~aa~~~~~~ce~~p~~a~ 75 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALK-----ERGYEVIATSRSDLDLTDPEAVAKLLEAFKPDVVINCAAYTNVDACEKNPEEAY 75 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHT-----TTSEEEEEESTTCS-TTSHHHHHHHHHHH--SEEEE------HHHHHHSHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHh-----hCCCEEEEeCchhcCCCCHHHHHHHHHHhCCCeEeccceeecHHhhhhChhhhH
Confidence 589999999999999999999 7999999998886553221 0111 23567789
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHHHHHHHh--
Q 030483 67 FKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-- 144 (176)
Q Consensus 67 ~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~-- 144 (176)
++|+.++.+++++|.+. + .+++++||..||.+. ...|++|+++.. |...|+..|+..|
T Consensus 76 ~iN~~~~~~la~~~~~~-----~-~~li~~STd~VFdG~------------~~~~y~E~d~~~--P~~~YG~~K~~~E~~ 135 (286)
T PF04321_consen 76 AINVDATKNLAEACKER-----G-ARLIHISTDYVFDGD------------KGGPYTEDDPPN--PLNVYGRSKLEGEQA 135 (286)
T ss_dssp HHHTHHHHHHHHHHHHC-----T--EEEEEEEGGGS-SS------------TSSSB-TTS------SSHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHc-----C-CcEEEeeccEEEcCC------------cccccccCCCCC--CCCHHHHHHHHHHHH
Confidence 99999999999999987 3 378999998887532 256899999865 5566766666655
Q ss_pred -hCCCceEEEeccCceEeCCCCCCCC
Q 030483 145 -YSPAITYSVHRSSVIIGASPRSLYX 169 (176)
Q Consensus 145 -~~~g~~~~ivRp~~v~G~~~~~~~~ 169 (176)
++..-+++|+|++++||+...++++
T Consensus 136 v~~~~~~~~IlR~~~~~g~~~~~~~~ 161 (286)
T PF04321_consen 136 VRAACPNALILRTSWVYGPSGRNFLR 161 (286)
T ss_dssp HHHH-SSEEEEEE-SEESSSSSSHHH
T ss_pred HHHhcCCEEEEecceecccCCCchhh
Confidence 2223489999999999996666544
No 25
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=99.79 E-value=2.2e-18 Score=140.01 Aligned_cols=139 Identities=18% Similarity=0.155 Sum_probs=94.8
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC--------CC----C---------C-----------C
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------WF----P---------T-----------A 56 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~~----~---------~-----------~ 56 (176)
+++||||||+||||++|+++|+ +.|++|++++|+.... .. . + +
T Consensus 4 ~~~ilVtGatGfIG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d 78 (322)
T PLN02662 4 GKVVCVTGASGYIASWLVKLLL-----QRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCE 78 (322)
T ss_pred CCEEEEECChHHHHHHHHHHHH-----HCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCC
Confidence 4789999999999999999999 7899999999864320 00 0 0 0
Q ss_pred cc----------cCcHH-HHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEecccee--ecccccCCCccCCCCCCCcccc
Q 030483 57 LV----------QESEE-VNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH--YMGPIFDPSLAGQLMPYEVPFK 123 (176)
Q Consensus 57 ~v----------~~~~~-~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~--yg~~~~d~~~~g~~~~~~~p~~ 123 (176)
.| ..++. +.+++|+.++.++++++.+. .++++|+++||..+ |++.. .. ...+++
T Consensus 79 ~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~----~~~~~~v~~SS~~~~~y~~~~-----~~----~~~~~~ 145 (322)
T PLN02662 79 GVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKV----PSVKRVVVTSSMAAVAYNGKP-----LT----PDVVVD 145 (322)
T ss_pred EEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhC----CCCCEEEEccCHHHhcCCCcC-----CC----CCCcCC
Confidence 01 12333 67889999999999999875 25789999999763 54210 00 124678
Q ss_pred CCCCCCCC----CcchHHHHHHHHh-------hCCCceEEEeccCceEeCCCC
Q 030483 124 EDSSRLPF----PNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 124 E~~~~~~~----~~~y~~~e~~~~~-------~~~g~~~~ivRp~~v~G~~~~ 165 (176)
|+.+..|. ....|...|...| +.++++++++||+++|||...
T Consensus 146 E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~ 198 (322)
T PLN02662 146 ETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQ 198 (322)
T ss_pred cccCCChhHhhcccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCC
Confidence 87754421 1123444443332 356899999999999999753
No 26
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=99.78 E-value=6.8e-19 Score=141.22 Aligned_cols=130 Identities=19% Similarity=0.159 Sum_probs=98.3
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-----------C--CCC--------------------
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----------W--FPT-------------------- 55 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----------~--~~~-------------------- 55 (176)
.++||||||+||||+|.+-+|+ .+||.|++++.-.... . ...
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~-----~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~ 76 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALL-----KRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV 76 (343)
T ss_pred CcEEEEecCCcceehHHHHHHH-----hCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc
Confidence 4789999999999999999999 7999999987532211 0 000
Q ss_pred --Ccc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCcc
Q 030483 56 --ALV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVP 121 (176)
Q Consensus 56 --~~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p 121 (176)
..| ..++..+.++|+.+|.|+|++++++ +++++++.||+.+||.+. ..|
T Consensus 77 ~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~-----~~~~~V~sssatvYG~p~------------~ip 139 (343)
T KOG1371|consen 77 KFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAH-----NVKALVFSSSATVYGLPT------------KVP 139 (343)
T ss_pred CCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHc-----CCceEEEecceeeecCcc------------eee
Confidence 000 2345668899999999999999998 589999999999999663 589
Q ss_pred ccCCCCCCCCC-cchHH----HHHHHHh--hCCCceEEEeccCceEe
Q 030483 122 FKEDSSRLPFP-NFYYE----LEDVSAS--YSPAITYSVHRSSVIIG 161 (176)
Q Consensus 122 ~~E~~~~~~~~-~~y~~----~e~~~~~--~~~g~~~~ivRp~~v~G 161 (176)
++|+++.. .| +.|.. .|++... ...++..+.+|.++++|
T Consensus 140 ~te~~~t~-~p~~pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~g 185 (343)
T KOG1371|consen 140 ITEEDPTD-QPTNPYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIG 185 (343)
T ss_pred ccCcCCCC-CCCCcchhhhHHHHHHHHhhhccccceEEEEEeccccC
Confidence 99999876 33 33333 3333333 35569999999999999
No 27
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=99.78 E-value=2.3e-18 Score=141.65 Aligned_cols=133 Identities=18% Similarity=0.127 Sum_probs=94.2
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC--------C--------CCC------------------
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------W--------FPT------------------ 55 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~--------~~~------------------ 55 (176)
|+||||||+||||++|+++|+ ..|++|++++|++... . ...
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~ 75 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLL-----EKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIID 75 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHH-----HCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHH
Confidence 589999999999999999999 7899999999874210 0 000
Q ss_pred ----Ccc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCC-CCccEEEEeccceeecccccCCCccCCCCCC
Q 030483 56 ----ALV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGR-SRLRHVALLTGTKHYMGPIFDPSLAGQLMPY 118 (176)
Q Consensus 56 ----~~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~-~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~ 118 (176)
+.| ...+...+++|+.++.+++++|.+. + .+.++++++||+.+||...
T Consensus 76 ~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~---~~~~~~~~v~~SS~~vyg~~~------------ 140 (343)
T TIGR01472 76 EIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTL---GLIKSVKFYQASTSELYGKVQ------------ 140 (343)
T ss_pred hCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHh---CCCcCeeEEEeccHHhhCCCC------------
Confidence 011 1123456688999999999999986 2 1224899999999998431
Q ss_pred CccccCCCCCCCCCcchHHHHH-----HHHh--hCCCceEEEeccCceEeCCC
Q 030483 119 EVPFKEDSSRLPFPNFYYELED-----VSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 119 ~~p~~E~~~~~~~~~~y~~~e~-----~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
..|++|+.+.. |...|...| ++.. +..++++++.|+.++|||+.
T Consensus 141 ~~~~~E~~~~~--p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~ 191 (343)
T TIGR01472 141 EIPQNETTPFY--PRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRR 191 (343)
T ss_pred CCCCCCCCCCC--CCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCC
Confidence 34678887754 333344333 3332 35688999999999999975
No 28
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=99.78 E-value=2.8e-18 Score=141.19 Aligned_cols=145 Identities=15% Similarity=0.161 Sum_probs=96.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC-CCCCC------Cc----------------------c
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP-GWFPT------AL----------------------V 58 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~-~~~~~------~~----------------------v 58 (176)
.+.++|||||+||+|+||+++|+++ ...++|+.++..+.. .|... .. |
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~---~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~~V 79 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLEN---ELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGAVV 79 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhc---ccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCceE
Confidence 3468999999999999999999942 124899999987752 11100 00 0
Q ss_pred ------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCC
Q 030483 59 ------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDS 126 (176)
Q Consensus 59 ------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~ 126 (176)
..+++..+++|+.||+|++++|.+. +++++|++||..|+.+... ..+++ +..|++..
T Consensus 80 vh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~-----~v~~lIYtSs~~Vvf~g~~--~~n~~---E~~p~p~~- 148 (361)
T KOG1430|consen 80 VHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKEL-----GVKRLIYTSSAYVVFGGEP--IINGD---ESLPYPLK- 148 (361)
T ss_pred EEeccccCccccccchhhheeecchhHHHHHHHHHHh-----CCCEEEEecCceEEeCCee--cccCC---CCCCCccc-
Confidence 2246778999999999999999998 7999999999888743210 01111 12222211
Q ss_pred CCCCCCcchHHHHHHHHh-h-CCCceEEEeccCceEeCCCCC
Q 030483 127 SRLPFPNFYYELEDVSAS-Y-SPAITYSVHRSSVIIGASPRS 166 (176)
Q Consensus 127 ~~~~~~~~y~~~e~~~~~-~-~~g~~~~ivRp~~v~G~~~~~ 166 (176)
...+++.+...+|+++.+ . ..++.++++||..||||+...
T Consensus 149 ~~d~Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~ 190 (361)
T KOG1430|consen 149 HIDPYGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKR 190 (361)
T ss_pred cccccchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCcc
Confidence 001122333345666655 2 356999999999999999743
No 29
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=99.78 E-value=2.5e-18 Score=139.18 Aligned_cols=128 Identities=13% Similarity=0.101 Sum_probs=89.3
Q ss_pred EEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC--------C---C------------------CCCcc----
Q 030483 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------W---F------------------PTALV---- 58 (176)
Q Consensus 12 vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~---~------------------~~~~v---- 58 (176)
||||||+||||+||+++|+ +.|++|+++.|+..+. . . +.+.|
T Consensus 2 ilVtGa~GfiG~~l~~~L~-----~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A 76 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALN-----DKGITDILVVDNLKDGTKFVNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHEG 76 (308)
T ss_pred EEEecCCcHHHHHHHHHHH-----hCCCceEEEecCCCcchHHHhhhhhhhhhhhhHHHHHHHHhcccccCCccEEEECc
Confidence 8999999999999999999 6899877766543210 0 0 00111
Q ss_pred ------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCC
Q 030483 59 ------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFP 132 (176)
Q Consensus 59 ------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~ 132 (176)
..++...++.|+.++.+++++|++. ++ +++++||+.+||.+. ..+++|+++.. |
T Consensus 77 ~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~-----~~-~~i~~SS~~vyg~~~------------~~~~~E~~~~~--p 136 (308)
T PRK11150 77 ACSSTTEWDGKYMMDNNYQYSKELLHYCLER-----EI-PFLYASSAATYGGRT------------DDFIEEREYEK--P 136 (308)
T ss_pred eecCCcCCChHHHHHHHHHHHHHHHHHHHHc-----CC-cEEEEcchHHhCcCC------------CCCCccCCCCC--C
Confidence 1123457889999999999999987 45 599999999998431 23566776544 2
Q ss_pred cchHHH-----HHHHHh--hCCCceEEEeccCceEeCCC
Q 030483 133 NFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 133 ~~y~~~-----e~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
...|.. |+++.+ ...+++++++||++||||+.
T Consensus 137 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~ 175 (308)
T PRK11150 137 LNVYGYSKFLFDEYVRQILPEANSQICGFRYFNVYGPRE 175 (308)
T ss_pred CCHHHHHHHHHHHHHHHHHHHcCCCEEEEeeeeecCCCC
Confidence 233443 333333 34689999999999999986
No 30
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=99.78 E-value=1.1e-18 Score=140.64 Aligned_cols=130 Identities=14% Similarity=0.128 Sum_probs=91.0
Q ss_pred EEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC-CCCC-----------CCCcc-------------cCcHHHHHH
Q 030483 13 LIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP-PGWF-----------PTALV-------------QESEEVNIF 67 (176)
Q Consensus 13 LVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~-~~~~-----------~~~~v-------------~~~~~~~~~ 67 (176)
||||||||||++|+++|+ ..|++|+.+.++.. +... ..+.| ..++.+.++
T Consensus 1 lItGa~GfiG~~l~~~L~-----~~g~~v~~~~~~~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~ 75 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLE-----ALGFTNLVLRTHKELDLTRQADVEAFFAKEKPTYVILAAAKVGGIHANMTYPADFIR 75 (306)
T ss_pred CcccCCCcccHHHHHHHH-----hCCCcEEEeeccccCCCCCHHHHHHHHhccCCCEEEEeeeeecccchhhhCcHHHHH
Confidence 699999999999999999 68888776654332 1110 01111 123456788
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCC--CCC-cchHHH-----H
Q 030483 68 KNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRL--PFP-NFYYEL-----E 139 (176)
Q Consensus 68 ~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~--~~~-~~y~~~-----e 139 (176)
+|+.++.+++++|++. ++++++++||..+||.. ...|++|+++.. +.| ...|.. |
T Consensus 76 ~n~~~~~~ll~~~~~~-----~~~~~i~~SS~~vyg~~------------~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e 138 (306)
T PLN02725 76 ENLQIQTNVIDAAYRH-----GVKKLLFLGSSCIYPKF------------APQPIPETALLTGPPEPTNEWYAIAKIAGI 138 (306)
T ss_pred HHhHHHHHHHHHHHHc-----CCCeEEEeCceeecCCC------------CCCCCCHHHhccCCCCCCcchHHHHHHHHH
Confidence 9999999999999987 57899999999999842 135788876321 112 333443 3
Q ss_pred HHHHh--hCCCceEEEeccCceEeCCC
Q 030483 140 DVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 140 ~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
+++.+ +..+++++++||++||||+.
T Consensus 139 ~~~~~~~~~~~~~~~~~R~~~vyG~~~ 165 (306)
T PLN02725 139 KMCQAYRIQYGWDAISGMPTNLYGPHD 165 (306)
T ss_pred HHHHHHHHHhCCCEEEEEecceeCCCC
Confidence 33332 35689999999999999974
No 31
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=99.78 E-value=5e-18 Score=137.74 Aligned_cols=135 Identities=15% Similarity=0.062 Sum_probs=98.5
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC----CC--------------------Ccc-------
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF----PT--------------------ALV------- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~----~~--------------------~~v------- 58 (176)
|++|||||+||||++|+++|+ ++|++|++++|++..... .. +.|
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~ 75 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLL-----EQGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAADY 75 (328)
T ss_pred CeEEEECCccchhHHHHHHHH-----HCCCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCCCEEEEeceec
Confidence 479999999999999999999 689999999997543110 00 001
Q ss_pred ---cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCC-cc
Q 030483 59 ---QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFP-NF 134 (176)
Q Consensus 59 ---~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~-~~ 134 (176)
..++.+.+++|+.++.++++++.+. ++++++++||..+|+... ...|++|+++..+.. ..
T Consensus 76 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~SS~~~~~~~~-----------~~~~~~e~~~~~~~~~~~ 139 (328)
T TIGR03466 76 RLWAPDPEEMYAANVEGTRNLLRAALEA-----GVERVVYTSSVATLGVRG-----------DGTPADETTPSSLDDMIG 139 (328)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHHh-----CCCeEEEEechhhcCcCC-----------CCCCcCccCCCCcccccC
Confidence 1245667899999999999999887 578999999999997321 135778887754321 22
Q ss_pred hHHH-----HHHHHh--hCCCceEEEeccCceEeCCCC
Q 030483 135 YYEL-----EDVSAS--YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 135 y~~~-----e~~~~~--~~~g~~~~ivRp~~v~G~~~~ 165 (176)
.|.. |+++.+ ...+++++++||+++|||+..
T Consensus 140 ~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~ 177 (328)
T TIGR03466 140 HYKRSKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDI 177 (328)
T ss_pred hHHHHHHHHHHHHHHHHHhcCCCEEEEeCCccCCCCCC
Confidence 3443 444433 346899999999999999863
No 32
>PLN02583 cinnamoyl-CoA reductase
Probab=99.78 E-value=3.7e-18 Score=138.11 Aligned_cols=139 Identities=12% Similarity=0.119 Sum_probs=94.1
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC--------CC----CCCC--------------------
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP--------GW----FPTA-------------------- 56 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~--------~~----~~~~-------------------- 56 (176)
+++|||||||||||++|+++|+ ++||+|++++|+... .. ....
T Consensus 6 ~k~vlVTGatG~IG~~lv~~Ll-----~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d 80 (297)
T PLN02583 6 SKSVCVMDASGYVGFWLVKRLL-----SRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCS 80 (297)
T ss_pred CCEEEEECCCCHHHHHHHHHHH-----hCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCC
Confidence 5789999999999999999999 799999999985211 00 0000
Q ss_pred cc----------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeec-ccccCCCccCCCCCCCccccCC
Q 030483 57 LV----------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYM-GPIFDPSLAGQLMPYEVPFKED 125 (176)
Q Consensus 57 ~v----------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg-~~~~d~~~~g~~~~~~~p~~E~ 125 (176)
.+ ...+.+.+++|+.++.+++++|.+. . .+++||++||...++ ++. +. ....+++|+
T Consensus 81 ~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~---~-~v~riV~~SS~~a~~~~~~------~~--~~~~~~~E~ 148 (297)
T PLN02583 81 GLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQT---D-TIEKVVFTSSLTAVIWRDD------NI--STQKDVDER 148 (297)
T ss_pred EEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhc---C-CccEEEEecchHheecccc------cC--CCCCCCCcc
Confidence 00 1124567899999999999999876 2 468999999987653 100 00 013467887
Q ss_pred CCCCCC----CcchHHHHHHHHh-------hCCCceEEEeccCceEeCCC
Q 030483 126 SSRLPF----PNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 126 ~~~~~~----~~~y~~~e~~~~~-------~~~g~~~~ivRp~~v~G~~~ 164 (176)
++..+. +...|...|.+.| +..+++++++||++||||..
T Consensus 149 ~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~ 198 (297)
T PLN02583 149 SWSDQNFCRKFKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSL 198 (297)
T ss_pred cCCCHHHHhhcccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCC
Confidence 643210 1113544444433 25689999999999999986
No 33
>PLN02240 UDP-glucose 4-epimerase
Probab=99.77 E-value=7.2e-18 Score=138.65 Aligned_cols=135 Identities=19% Similarity=0.133 Sum_probs=96.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC--------------CCC------------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------------WFP------------------ 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------------~~~------------------ 54 (176)
+++++||||||+||||++|+++|+ ++|++|++++|..... ...
T Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~-----~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~ 77 (352)
T PLN02240 3 LMGRTILVTGGAGYIGSHTVLQLL-----LAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVF 77 (352)
T ss_pred CCCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHH
Confidence 456899999999999999999999 6899999998642100 000
Q ss_pred ----CCcc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCC
Q 030483 55 ----TALV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPY 118 (176)
Q Consensus 55 ----~~~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~ 118 (176)
.+.| ..++.+.+++|+.++.+++++|.+. ++++++++||+.+||.. .
T Consensus 78 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~Ss~~vyg~~------------~ 140 (352)
T PLN02240 78 ASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKH-----GCKKLVFSSSATVYGQP------------E 140 (352)
T ss_pred HhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEccHHHhCCC------------C
Confidence 0001 1234567899999999999999886 57899999999899732 1
Q ss_pred CccccCCCCCCCCCcchH----HHHHHHHh---hCCCceEEEeccCceEeCCC
Q 030483 119 EVPFKEDSSRLPFPNFYY----ELEDVSAS---YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 119 ~~p~~E~~~~~~~~~~y~----~~e~~~~~---~~~g~~~~ivRp~~v~G~~~ 164 (176)
..|++|+++..+ ...|. ..|.++.. ...+++.+++|++++||+.+
T Consensus 141 ~~~~~E~~~~~~-~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~ 192 (352)
T PLN02240 141 EVPCTEEFPLSA-TNPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHP 192 (352)
T ss_pred CCCCCCCCCCCC-CCHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCc
Confidence 457889887653 23333 23444433 23578999999999999754
No 34
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=99.77 E-value=3.9e-18 Score=140.82 Aligned_cols=142 Identities=17% Similarity=0.173 Sum_probs=92.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------C---CC--------------------CCcc
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------W---FP--------------------TALV 58 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~---~~--------------------~~~v 58 (176)
.+++||||||+||||++|+++|+ .+|++|++++|+.... + .. .+.|
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 83 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLL-----QRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGV 83 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEE
Confidence 35789999999999999999999 6899999998864210 0 00 0111
Q ss_pred ---------c-----CcHHH-----HHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCC
Q 030483 59 ---------Q-----ESEEV-----NIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYE 119 (176)
Q Consensus 59 ---------~-----~~~~~-----~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~ 119 (176)
. .++.. .++.|+.++.+++++|.+. . ++++|+++||..+||.... .+. ..
T Consensus 84 ih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~---~-~~~~~v~~SS~~vyg~~~~----~~~---~~ 152 (353)
T PLN02896 84 FHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKS---K-TVKRVVFTSSISTLTAKDS----NGR---WR 152 (353)
T ss_pred EECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhc---C-CccEEEEEechhhcccccc----CCC---CC
Confidence 1 12222 2345568999999999876 2 4789999999999984210 010 01
Q ss_pred ccccCCCCCC-------CCCcchHHHHHHH-----Hh--hCCCceEEEeccCceEeCCCC
Q 030483 120 VPFKEDSSRL-------PFPNFYYELEDVS-----AS--YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 120 ~p~~E~~~~~-------~~~~~y~~~e~~~-----~~--~~~g~~~~ivRp~~v~G~~~~ 165 (176)
.|++|+.+.. ..+...|...|+. .+ +.++++++++||++||||+..
T Consensus 153 ~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~ 212 (353)
T PLN02896 153 AVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLT 212 (353)
T ss_pred CccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcC
Confidence 3566663210 1122234444433 33 357899999999999999763
No 35
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=99.77 E-value=6.9e-18 Score=139.14 Aligned_cols=138 Identities=12% Similarity=0.044 Sum_probs=92.6
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEE-EecCCCC-------CC-C--C----------------------CC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYG-AARRPPP-------GW-F--P----------------------TA 56 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~-l~R~~~~-------~~-~--~----------------------~~ 56 (176)
++|||||||||||++|+++|+ .+|++|+. ++|.... .. . . .+
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~-----~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D 76 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYII-----NETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPD 76 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHH-----HcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCC
Confidence 589999999999999999999 68887554 4442110 00 0 0 01
Q ss_pred cc------------cCcHHHHHHHHHHHHHHHHHHHHhcCC----CCCCccEEEEeccceeecccccCCCccCCCCCCCc
Q 030483 57 LV------------QESEEVNIFKNSTMLKNVLSVLVSSNS----GRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEV 120 (176)
Q Consensus 57 ~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~----~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~ 120 (176)
.| .+.+.+.+++|+.++.+++++|.+... ...++++++++||.++||... + ...
T Consensus 77 ~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~------~----~~~ 146 (355)
T PRK10217 77 CVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLH------S----TDD 146 (355)
T ss_pred EEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCC------C----CCC
Confidence 11 113456789999999999999976200 012467899999999997321 1 134
Q ss_pred cccCCCCCCCCCcchHHH-----HHHHHh--hCCCceEEEeccCceEeCCC
Q 030483 121 PFKEDSSRLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 121 p~~E~~~~~~~~~~y~~~-----e~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
|++|+.+.. |...|.. |.++.. +..+++++++||++||||+.
T Consensus 147 ~~~E~~~~~--p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~ 195 (355)
T PRK10217 147 FFTETTPYA--PSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYH 195 (355)
T ss_pred CcCCCCCCC--CCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCC
Confidence 688887654 3333443 333333 45789999999999999986
No 36
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.76 E-value=6.4e-18 Score=150.28 Aligned_cols=137 Identities=16% Similarity=0.082 Sum_probs=94.8
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCC--CcEEEEEecCCC--C------C--CCC----------------------
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGS--PWKVYGAARRPP--P------G--WFP---------------------- 54 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~--g~~V~~l~R~~~--~------~--~~~---------------------- 54 (176)
.|+|||||||||||++|+++|+ .+ +++|++++|... . . ...
T Consensus 6 ~~~VLVTGatGfIG~~lv~~Ll-----~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~ 80 (668)
T PLN02260 6 PKNILITGAAGFIASHVANRLI-----RNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEG 80 (668)
T ss_pred CCEEEEECCCcHHHHHHHHHHH-----HhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcC
Confidence 4789999999999999999999 44 789999987421 0 0 000
Q ss_pred CCcc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccc
Q 030483 55 TALV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPF 122 (176)
Q Consensus 55 ~~~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~ 122 (176)
.+.| ..++.+.+++|+.+|.+++++|++. + .+++||++||..+||.... . ...+.
T Consensus 81 ~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~---~-~vkr~I~~SS~~vyg~~~~-----~----~~~~~ 147 (668)
T PLN02260 81 IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT---G-QIRRFIHVSTDEVYGETDE-----D----ADVGN 147 (668)
T ss_pred CCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhc---C-CCcEEEEEcchHHhCCCcc-----c----cccCc
Confidence 0111 1234567889999999999999987 2 4789999999999984320 0 01234
Q ss_pred cCCCCCCCCCcchH----HHHHHHHh--hCCCceEEEeccCceEeCCC
Q 030483 123 KEDSSRLPFPNFYY----ELEDVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 123 ~E~~~~~~~~~~y~----~~e~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
+|+++..| .+.|. ..|.++.+ +.++++++|+||++||||+.
T Consensus 148 ~E~~~~~p-~~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~ 194 (668)
T PLN02260 148 HEASQLLP-TNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQ 194 (668)
T ss_pred cccCCCCC-CCCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCC
Confidence 56665442 23333 33555543 35689999999999999986
No 37
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=99.75 E-value=1.6e-17 Score=135.91 Aligned_cols=132 Identities=15% Similarity=0.141 Sum_probs=93.3
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------------CC-C----------------CC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------------WF-P----------------TA 56 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------------~~-~----------------~~ 56 (176)
|++|||||+||||++|+++|+ ++|++|++++|..... +. . .+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~-----~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 75 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLL-----QNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAID 75 (338)
T ss_pred CeEEEECCCChHHHHHHHHHH-----HCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCC
Confidence 479999999999999999999 6899999987642110 00 0 00
Q ss_pred cc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccC
Q 030483 57 LV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKE 124 (176)
Q Consensus 57 ~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E 124 (176)
.| ...+.+.+++|+.++.+++++|++. ++++|+++||..+||.. ...+++|
T Consensus 76 ~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~Ss~~~yg~~------------~~~~~~E 138 (338)
T PRK10675 76 TVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-----NVKNLIFSSSATVYGDQ------------PKIPYVE 138 (338)
T ss_pred EEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEeccHHhhCCC------------CCCcccc
Confidence 01 1123467889999999999999987 57899999999999732 1357888
Q ss_pred CCCCCCCCcchHHH-----HHHHHh--h-CCCceEEEeccCceEeCCC
Q 030483 125 DSSRLPFPNFYYEL-----EDVSAS--Y-SPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 125 ~~~~~~~~~~y~~~-----e~~~~~--~-~~g~~~~ivRp~~v~G~~~ 164 (176)
+++.. .|...|.. |+++.. + ..+++++++|++++|||.+
T Consensus 139 ~~~~~-~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~ 185 (338)
T PRK10675 139 SFPTG-TPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHP 185 (338)
T ss_pred ccCCC-CCCChhHHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCc
Confidence 88752 12333333 444443 2 2478999999999999864
No 38
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.74 E-value=1e-17 Score=133.10 Aligned_cols=136 Identities=14% Similarity=0.081 Sum_probs=96.6
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC--------CC--C---------C-------------Cc
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------WF--P---------T-------------AL 57 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~~--~---------~-------------~~ 57 (176)
|++|||||.||||++.++.+++++ ..++|+.++.-.-.. .. . + +.
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~---~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~ 77 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKH---PDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDA 77 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcC---CCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCe
Confidence 579999999999999999999532 226688887542210 00 0 0 00
Q ss_pred c------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCC
Q 030483 58 V------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKED 125 (176)
Q Consensus 58 v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~ 125 (176)
| ...|+.++++|+.||.+|||++++. ... .+++.+|+-.|||.-.. ....++|+
T Consensus 78 VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~---~~~-frf~HISTDEVYG~l~~----------~~~~FtE~ 143 (340)
T COG1088 78 VVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKY---WGK-FRFHHISTDEVYGDLGL----------DDDAFTET 143 (340)
T ss_pred EEEechhccccccccChhhhhhcchHHHHHHHHHHHHh---ccc-ceEEEeccccccccccC----------CCCCcccC
Confidence 1 3357788999999999999999998 322 47899999999994321 12357899
Q ss_pred CCCCCCCcchHHHHH-----HHHh--hCCCceEEEeccCceEeCCC
Q 030483 126 SSRLPFPNFYYELED-----VSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 126 ~~~~~~~~~y~~~e~-----~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
+|.+| ++.|.++| +++. +.+|++++|.|++|-|||..
T Consensus 144 tp~~P--sSPYSASKAasD~lVray~~TYglp~~ItrcSNNYGPyq 187 (340)
T COG1088 144 TPYNP--SSPYSASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQ 187 (340)
T ss_pred CCCCC--CCCcchhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCc
Confidence 98763 33333333 3333 68999999999999999987
No 39
>PLN02686 cinnamoyl-CoA reductase
Probab=99.74 E-value=1.4e-17 Score=138.68 Aligned_cols=142 Identities=13% Similarity=0.129 Sum_probs=93.0
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC-------------------CC-C--C--C------
Q 030483 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP-------------------GW-F--P--T------ 55 (176)
Q Consensus 6 ~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~-------------------~~-~--~--~------ 55 (176)
.+++|+||||||+||||++|+++|+ .+||+|+++.|+... .. . . +
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~-----~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~ 124 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLL-----RHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHE 124 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHH
Confidence 3567899999999999999999999 799999988775311 00 0 0 0
Q ss_pred -----Ccc---------cC---cHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccc--eeecccccCCCccCCCC
Q 030483 56 -----ALV---------QE---SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT--KHYMGPIFDPSLAGQLM 116 (176)
Q Consensus 56 -----~~v---------~~---~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~--~~yg~~~~d~~~~g~~~ 116 (176)
+.+ .. ......++|+.++.+++++|.+. . ++++||++||. .+||... ...
T Consensus 125 ~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~---~-~v~r~V~~SS~~~~vyg~~~------~~~- 193 (367)
T PLN02686 125 AFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRT---E-SVRKCVFTSSLLACVWRQNY------PHD- 193 (367)
T ss_pred HHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhc---C-CccEEEEeccHHHhcccccC------CCC-
Confidence 000 11 12345678999999999999875 2 58899999985 4776310 000
Q ss_pred CCCccccCCCCCC----CCCcchHHH-----HHHHHh--hCCCceEEEeccCceEeCCC
Q 030483 117 PYEVPFKEDSSRL----PFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 117 ~~~~p~~E~~~~~----~~~~~y~~~-----e~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
...+++|++... +.|...|.. |+++.. +.++++++++||++||||+.
T Consensus 194 -~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~ 251 (367)
T PLN02686 194 -LPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGF 251 (367)
T ss_pred -CCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCC
Confidence 012356654221 123333443 444332 35689999999999999975
No 40
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=99.74 E-value=2.6e-17 Score=135.15 Aligned_cols=137 Identities=18% Similarity=0.094 Sum_probs=94.6
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC----CC-----------CCC------------------
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP----GW-----------FPT------------------ 55 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~----~~-----------~~~------------------ 55 (176)
+++||||||+||||++|+++|+ ..||+|++++|+... .. ...
T Consensus 6 ~~~vlVTGatGfiG~~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 80 (340)
T PLN02653 6 RKVALITGITGQDGSYLTEFLL-----SKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLD 80 (340)
T ss_pred CCEEEEECCCCccHHHHHHHHH-----HCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHH
Confidence 5789999999999999999999 689999999886421 00 000
Q ss_pred ----Ccc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCC
Q 030483 56 ----ALV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYE 119 (176)
Q Consensus 56 ----~~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~ 119 (176)
+.| ..++...+++|+.++.++++++.+..-....+.+|+++||..+||.. .
T Consensus 81 ~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~-------------~ 147 (340)
T PLN02653 81 DIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGST-------------P 147 (340)
T ss_pred HcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCC-------------C
Confidence 001 12334567899999999999999871000012489999999999842 2
Q ss_pred ccccCCCCCCCCCcchHHHH-----HHHHh--hCCCceEEEeccCceEeCCCC
Q 030483 120 VPFKEDSSRLPFPNFYYELE-----DVSAS--YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 120 ~p~~E~~~~~~~~~~y~~~e-----~~~~~--~~~g~~~~ivRp~~v~G~~~~ 165 (176)
.|++|+++.. |...|... .++.. ..++++++..|+.++|||+..
T Consensus 148 ~~~~E~~~~~--p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~ 198 (340)
T PLN02653 148 PPQSETTPFH--PRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRG 198 (340)
T ss_pred CCCCCCCCCC--CCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCC
Confidence 3778888765 33334433 33332 356888899999999999753
No 41
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=99.74 E-value=3e-17 Score=131.20 Aligned_cols=131 Identities=16% Similarity=0.205 Sum_probs=89.3
Q ss_pred EEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC----CC---------------CCcc-------c--C---
Q 030483 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FP---------------TALV-------Q--E--- 60 (176)
Q Consensus 12 vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~----~~---------------~~~v-------~--~--- 60 (176)
||||||+||||++|+++|+ +.|++|++++|+..... .. .+.| . .
T Consensus 1 vlVtGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vvh~a~~~~~~~~~~ 75 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLT-----KDGHEVTILTRSPPAGANTKWEGYKPWAPLAESEALEGADAVINLAGEPIADKRWT 75 (292)
T ss_pred CEEEcccchhhHHHHHHHH-----HcCCEEEEEeCCCCCCCcccceeeecccccchhhhcCCCCEEEECCCCCcccccCC
Confidence 6899999999999999999 68999999999765321 00 0111 0 1
Q ss_pred --cHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHH-
Q 030483 61 --SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYE- 137 (176)
Q Consensus 61 --~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~- 137 (176)
.+.+.+++|+.++.++++++++. +.+..++++.|+..+||.. ...+++|+++.. +..++.
T Consensus 76 ~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~~i~~S~~~~yg~~------------~~~~~~E~~~~~--~~~~~~~ 138 (292)
T TIGR01777 76 EERKQEIRDSRIDTTRALVEAIAAA---EQKPKVFISASAVGYYGTS------------EDRVFTEEDSPA--GDDFLAE 138 (292)
T ss_pred HHHHHHHHhcccHHHHHHHHHHHhc---CCCceEEEEeeeEEEeCCC------------CCCCcCcccCCC--CCChHHH
Confidence 12456789999999999999987 3222356666666678732 135788887532 232332
Q ss_pred ----HHHHHHh-hCCCceEEEeccCceEeCCC
Q 030483 138 ----LEDVSAS-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 138 ----~e~~~~~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
.|..+.. +..+++++|+||+++|||..
T Consensus 139 ~~~~~e~~~~~~~~~~~~~~ilR~~~v~G~~~ 170 (292)
T TIGR01777 139 LCRDWEEAAQAAEDLGTRVVLLRTGIVLGPKG 170 (292)
T ss_pred HHHHHHHHhhhchhcCCceEEEeeeeEECCCc
Confidence 2333322 34589999999999999974
No 42
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.72 E-value=8.5e-17 Score=142.41 Aligned_cols=133 Identities=22% Similarity=0.220 Sum_probs=91.4
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC--------C-------------C--------------C
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------W-------------F--------------P 54 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~-------------~--------------~ 54 (176)
|+|||||||||||++|+++|+++ ..|++|++++|+.... + . .
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~---~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l~~ 77 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDR---RREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAELGD 77 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhc---CCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHhcC
Confidence 47999999999999999999931 3789999999964210 0 0 0
Q ss_pred CCcc---------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCC
Q 030483 55 TALV---------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKED 125 (176)
Q Consensus 55 ~~~v---------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~ 125 (176)
.+.| ..+..+..++|+.++.+++++|.+. ++++|+++||..+||.. ..+++|+
T Consensus 78 ~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~-----~~~~~v~~SS~~v~g~~-------------~~~~~e~ 139 (657)
T PRK07201 78 IDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERL-----QAATFHHVSSIAVAGDY-------------EGVFRED 139 (657)
T ss_pred CCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhc-----CCCeEEEEeccccccCc-------------cCccccc
Confidence 0111 2234567789999999999999987 57899999999999732 1234444
Q ss_pred CCCC--CCCcchH----HHHHHHHhhCCCceEEEeccCceEeCCC
Q 030483 126 SSRL--PFPNFYY----ELEDVSASYSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 126 ~~~~--~~~~~y~----~~e~~~~~~~~g~~~~ivRp~~v~G~~~ 164 (176)
+... .....|. ..|+++.+ ..+++++|+||++||||..
T Consensus 140 ~~~~~~~~~~~Y~~sK~~~E~~~~~-~~g~~~~ilRp~~v~G~~~ 183 (657)
T PRK07201 140 DFDEGQGLPTPYHRTKFEAEKLVRE-ECGLPWRVYRPAVVVGDSR 183 (657)
T ss_pred cchhhcCCCCchHHHHHHHHHHHHH-cCCCcEEEEcCCeeeecCC
Confidence 3211 1123332 23333332 5689999999999999875
No 43
>PLN00016 RNA-binding protein; Provisional
Probab=99.72 E-value=2.8e-17 Score=137.16 Aligned_cols=133 Identities=20% Similarity=0.170 Sum_probs=93.9
Q ss_pred CCCeEEEE----cCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC---------------CCCCcccCcH---HHH
Q 030483 8 PKSVALII----GVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------------FPTALVQESE---EVN 65 (176)
Q Consensus 8 ~~~~vLVt----GatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~---------------~~~~~v~~~~---~~~ 65 (176)
++++|||| |||||||++|+++|+ +.||+|++++|+..... .....+..+. ...
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~-----~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~~ 125 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELV-----KAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADVKSK 125 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHH-----HCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHHHHhh
Confidence 45789999 999999999999999 68999999999864310 0011111111 111
Q ss_pred ---------HH---HHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCc
Q 030483 66 ---------IF---KNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPN 133 (176)
Q Consensus 66 ---------~~---~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~ 133 (176)
++ .+..++.+++++|++. ++++||++||..+|+.. ...|..|+++..|. .
T Consensus 126 ~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~-----gvkr~V~~SS~~vyg~~------------~~~p~~E~~~~~p~-~ 187 (378)
T PLN00016 126 VAGAGFDVVYDNNGKDLDEVEPVADWAKSP-----GLKQFLFCSSAGVYKKS------------DEPPHVEGDAVKPK-A 187 (378)
T ss_pred hccCCccEEEeCCCCCHHHHHHHHHHHHHc-----CCCEEEEEccHhhcCCC------------CCCCCCCCCcCCCc-c
Confidence 11 1256788999999987 68899999999999732 13467777765432 2
Q ss_pred chHHHHHHHHhhCCCceEEEeccCceEeCCCC
Q 030483 134 FYYELEDVSASYSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 134 ~y~~~e~~~~~~~~g~~~~ivRp~~v~G~~~~ 165 (176)
.+...|.+++ ..+++++++||+++|||...
T Consensus 188 sK~~~E~~l~--~~~l~~~ilRp~~vyG~~~~ 217 (378)
T PLN00016 188 GHLEVEAYLQ--KLGVNWTSFRPQYIYGPGNN 217 (378)
T ss_pred hHHHHHHHHH--HcCCCeEEEeceeEECCCCC
Confidence 4455566654 46899999999999999753
No 44
>PLN02778 3,5-epimerase/4-reductase
Probab=99.70 E-value=2.7e-16 Score=127.52 Aligned_cols=145 Identities=14% Similarity=0.003 Sum_probs=93.3
Q ss_pred CCcCCCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC--------CCCCCcc--------------
Q 030483 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------WFPTALV-------------- 58 (176)
Q Consensus 1 ~~~~~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v-------------- 58 (176)
|.-+.+.++|+||||||+||||++|+++|+ ++|++|+...++..+. ....+.|
T Consensus 1 ~~~~~~~~~~kiLVtG~tGfiG~~l~~~L~-----~~g~~V~~~~~~~~~~~~v~~~l~~~~~D~ViH~Aa~~~~~~~~~ 75 (298)
T PLN02778 1 SNGTAGSATLKFLIYGKTGWIGGLLGKLCQ-----EQGIDFHYGSGRLENRASLEADIDAVKPTHVFNAAGVTGRPNVDW 75 (298)
T ss_pred CCCCCCCCCCeEEEECCCCHHHHHHHHHHH-----hCCCEEEEecCccCCHHHHHHHHHhcCCCEEEECCcccCCCCchh
Confidence 445556677899999999999999999999 7899997654332210 0011111
Q ss_pred -cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHH
Q 030483 59 -QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYE 137 (176)
Q Consensus 59 -~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~ 137 (176)
..++.+.+++|+.++.+++++|++. +++++ +.||..+|+.... ...+ ...+++|+++..+ +...|.
T Consensus 76 ~~~~p~~~~~~Nv~gt~~ll~aa~~~-----gv~~v-~~sS~~vy~~~~~--~p~~----~~~~~~Ee~~p~~-~~s~Yg 142 (298)
T PLN02778 76 CESHKVETIRANVVGTLTLADVCRER-----GLVLT-NYATGCIFEYDDA--HPLG----SGIGFKEEDTPNF-TGSFYS 142 (298)
T ss_pred hhhCHHHHHHHHHHHHHHHHHHHHHh-----CCCEE-EEecceEeCCCCC--CCcc----cCCCCCcCCCCCC-CCCchH
Confidence 1245678899999999999999987 56654 4566678863110 0001 1235788776442 334465
Q ss_pred HHHHHHh---hCCCceEEEeccCceEeCCC
Q 030483 138 LEDVSAS---YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 138 ~e~~~~~---~~~g~~~~ivRp~~v~G~~~ 164 (176)
..|+..| ..+ -+..++|+..++|+..
T Consensus 143 ~sK~~~E~~~~~y-~~~~~lr~~~~~~~~~ 171 (298)
T PLN02778 143 KTKAMVEELLKNY-ENVCTLRVRMPISSDL 171 (298)
T ss_pred HHHHHHHHHHHHh-hccEEeeecccCCccc
Confidence 5555555 122 3577899988888753
No 45
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=99.70 E-value=1.8e-16 Score=128.11 Aligned_cols=128 Identities=14% Similarity=0.128 Sum_probs=88.5
Q ss_pred EEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCCCCC-CC--------------------------CCCcc-----
Q 030483 12 ALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPG-WF--------------------------PTALV----- 58 (176)
Q Consensus 12 vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~-~~--------------------------~~~~v----- 58 (176)
|||||||||||++|+++|+ +.|+ +|++++|..... +. ..+.|
T Consensus 1 ilItGatG~iG~~l~~~L~-----~~g~~~v~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~ 75 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALN-----ERGITDILVVDNLRDGHKFLNLADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGA 75 (314)
T ss_pred CEEeCCcchhhHHHHHHHH-----HcCCceEEEEecCCCchhhhhhhheeeeccCcchhHHHHHHhhccCCCCEEEECcc
Confidence 6999999999999999999 6887 798887653211 00 00111
Q ss_pred -----cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCc
Q 030483 59 -----QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPN 133 (176)
Q Consensus 59 -----~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~ 133 (176)
..++...+++|+.++.+++++|.+. ++ +++++||+.+|+.. ..+++|+++.. .|.
T Consensus 76 ~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-----~~-~~v~~SS~~vy~~~-------------~~~~~e~~~~~-~p~ 135 (314)
T TIGR02197 76 CSDTTETDGEYMMENNYQYSKRLLDWCAEK-----GI-PFIYASSAATYGDG-------------EAGFREGRELE-RPL 135 (314)
T ss_pred ccCccccchHHHHHHHHHHHHHHHHHHHHh-----CC-cEEEEccHHhcCCC-------------CCCcccccCcC-CCC
Confidence 1244567889999999999999987 44 69999999999732 23556665432 133
Q ss_pred chHHH-----HHHHHh---h-CCCceEEEeccCceEeCCC
Q 030483 134 FYYEL-----EDVSAS---Y-SPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 134 ~y~~~-----e~~~~~---~-~~g~~~~ivRp~~v~G~~~ 164 (176)
..|.. |.++.+ + ..+++++++||++||||+.
T Consensus 136 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~ 175 (314)
T TIGR02197 136 NVYGYSKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPRE 175 (314)
T ss_pred CHHHHHHHHHHHHHHHHhHhhccCCceEEEEEeeccCCCC
Confidence 33443 333332 1 3357899999999999985
No 46
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=99.68 E-value=3.2e-16 Score=129.09 Aligned_cols=145 Identities=13% Similarity=0.048 Sum_probs=91.3
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcE-EEEEecCCCC-C---------CCC----------------------CC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAARRPPP-G---------WFP----------------------TA 56 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~-V~~l~R~~~~-~---------~~~----------------------~~ 56 (176)
|+||||||+||||++|+++|+ ++|++ |++++|.... . ... .+
T Consensus 1 mkilITGgtG~iG~~l~~~L~-----~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 75 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHII-----NNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPD 75 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHH-----HhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCC
Confidence 479999999999999999999 57765 6656543210 0 000 01
Q ss_pred cc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCC----CCCccEEEEeccceeeccccc-CCCccCCCCCCC
Q 030483 57 LV------------QESEEVNIFKNSTMLKNVLSVLVSSNSG----RSRLRHVALLTGTKHYMGPIF-DPSLAGQLMPYE 119 (176)
Q Consensus 57 ~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~----~~~v~~vv~~Ss~~~yg~~~~-d~~~~g~~~~~~ 119 (176)
.| ..++++.+++|+.++.+++++|.+.+.. ..++++++++||..+||.... +. ..+.. ..
T Consensus 76 ~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~-~~~~~--~~ 152 (352)
T PRK10084 76 AVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDE-VENSE--EL 152 (352)
T ss_pred EEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCcccc-ccccc--cC
Confidence 11 1134668899999999999999863100 013568999999999984210 00 00000 01
Q ss_pred ccccCCCCCCCCCcchHHH-----HHHHHh--hCCCceEEEeccCceEeCCC
Q 030483 120 VPFKEDSSRLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 120 ~p~~E~~~~~~~~~~y~~~-----e~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
.+++|+.+.. |...|.. |.++.. +.++++++++|+++||||..
T Consensus 153 ~~~~E~~~~~--p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~ 202 (352)
T PRK10084 153 PLFTETTAYA--PSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYH 202 (352)
T ss_pred CCccccCCCC--CCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCc
Confidence 2477887654 3333443 333333 35689999999999999985
No 47
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.68 E-value=7e-16 Score=126.42 Aligned_cols=144 Identities=18% Similarity=0.099 Sum_probs=99.2
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------------CCCC--Ccc--------------
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------------WFPT--ALV-------------- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------------~~~~--~~v-------------- 58 (176)
+++|+||||||+|++|+.+|+. ....+|++++|...+. |.+. +.|
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~----~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL 76 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLD----RSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGL 76 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHh----cCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCC
Confidence 4799999999999999999994 3446899999986631 1100 000
Q ss_pred ------------------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCC
Q 030483 59 ------------------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQ 114 (176)
Q Consensus 59 ------------------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~ 114 (176)
..+.++....|+.||..+++.|... ++|.+.|+||++++.... +..+
T Consensus 77 ~~~~~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~g-----k~Kp~~yVSsisv~~~~~--~~~~-- 147 (382)
T COG3320 77 SERTWQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATG-----KPKPLHYVSSISVGETEY--YSNF-- 147 (382)
T ss_pred CHHHHHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcC-----CCceeEEEeeeeeccccc--cCCC--
Confidence 1234667889999999999999876 678899999999985321 1111
Q ss_pred CCCCCccccCCCCC--------CCCCcchHHHHHHHHh-hCCCceEEEeccCceEeCCCCCCCCC
Q 030483 115 LMPYEVPFKEDSSR--------LPFPNFYYELEDVSAS-YSPAITYSVHRSSVIIGASPRSLYXX 170 (176)
Q Consensus 115 ~~~~~~p~~E~~~~--------~~~~~~y~~~e~~~~~-~~~g~~~~ivRp~~v~G~~~~~~~~~ 170 (176)
....+|+++. .++..+++.+|+++++ ...|++.+|+||+.|.|.+....+|+
T Consensus 148 ----~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~tG~~n~ 208 (382)
T COG3320 148 ----TVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSRTGALNT 208 (382)
T ss_pred ----ccccccccccccccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCccCcccc
Confidence 1112222322 1233455667888877 34599999999999999998555553
No 48
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=99.68 E-value=5.9e-16 Score=125.20 Aligned_cols=131 Identities=21% Similarity=0.216 Sum_probs=92.0
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---CC------CC----------------------Ccc-
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---WF------PT----------------------ALV- 58 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---~~------~~----------------------~~v- 58 (176)
+||||||+||||++|+++|+ +.|++|++++|..... .. .. +.+
T Consensus 1 kvlV~GatG~iG~~l~~~l~-----~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv 75 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLL-----ESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVI 75 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHH-----hCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEE
Confidence 58999999999999999999 6899999886532210 00 00 000
Q ss_pred -----------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCC
Q 030483 59 -----------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSS 127 (176)
Q Consensus 59 -----------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~ 127 (176)
..++.+.+..|+.++.++++++.+. ++++++++||..+|+.+ ...+++|+++
T Consensus 76 ~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~ss~~~~g~~------------~~~~~~e~~~ 138 (328)
T TIGR01179 76 HFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQT-----GVKKFIFSSSAAVYGEP------------SSIPISEDSP 138 (328)
T ss_pred ECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhc-----CCCEEEEecchhhcCCC------------CCCCccccCC
Confidence 1123456788999999999999887 56799999998888732 1346888887
Q ss_pred CCCCCcchH----HHHHHHHh--hC-CCceEEEeccCceEeCCC
Q 030483 128 RLPFPNFYY----ELEDVSAS--YS-PAITYSVHRSSVIIGASP 164 (176)
Q Consensus 128 ~~~~~~~y~----~~e~~~~~--~~-~g~~~~ivRp~~v~G~~~ 164 (176)
..+ ...|. ..|.++.. +. .+++++++||+.+|||.+
T Consensus 139 ~~~-~~~y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~ 181 (328)
T TIGR01179 139 LGP-INPYGRSKLMSERILRDLSKADPGLSYVILRYFNVAGADP 181 (328)
T ss_pred CCC-CCchHHHHHHHHHHHHHHHHhccCCCEEEEecCcccCCCC
Confidence 542 23342 23444433 23 689999999999999965
No 49
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=99.66 E-value=1.1e-15 Score=123.16 Aligned_cols=133 Identities=13% Similarity=0.041 Sum_probs=90.5
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCC--cEEEEEecCCCC----C-----CC-C----------------------CC
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPP----G-----WF-P----------------------TA 56 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~----~-----~~-~----------------------~~ 56 (176)
+|||||||||||++|+++|+ ..| ++|++++|.... . .. . .+
T Consensus 1 ~ilItGatG~iG~~l~~~l~-----~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d 75 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYIL-----NEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPD 75 (317)
T ss_pred CEEEEcCCchHHHHHHHHHH-----HhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCC
Confidence 58999999999999999999 455 789988763210 0 00 0 01
Q ss_pred cc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccC
Q 030483 57 LV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKE 124 (176)
Q Consensus 57 ~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E 124 (176)
.| ..++...+++|+.++.+++++|.+. ..+ .+++++||..+||... ...+++|
T Consensus 76 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~-~~~i~~Ss~~v~g~~~-----------~~~~~~e 140 (317)
T TIGR01181 76 AVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKY---WHE-FRFHHISTDEVYGDLE-----------KGDAFTE 140 (317)
T ss_pred EEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhc---CCC-ceEEEeeccceeCCCC-----------CCCCcCC
Confidence 11 1134456889999999999999886 222 2699999999998431 1236778
Q ss_pred CCCCCCCCcchH----HHHHHHHh--hCCCceEEEeccCceEeCCC
Q 030483 125 DSSRLPFPNFYY----ELEDVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 125 ~~~~~~~~~~y~----~~e~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
+++..+. ..|. ..|.++.+ ...+++++++||+.+|||..
T Consensus 141 ~~~~~~~-~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~ 185 (317)
T TIGR01181 141 TTPLAPS-SPYSASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQ 185 (317)
T ss_pred CCCCCCC-CchHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCC
Confidence 7765421 2332 23444433 35689999999999999975
No 50
>CHL00194 ycf39 Ycf39; Provisional
Probab=99.66 E-value=3.3e-16 Score=127.75 Aligned_cols=119 Identities=11% Similarity=0.130 Sum_probs=82.6
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----CCCC--------------------Ccc-------
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----WFPT--------------------ALV------- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~--------------------~~v------- 58 (176)
|+|||||||||||++|+++|+ ++||+|++++|+..+. .... +.|
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll-----~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~ 75 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQAL-----DEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDASTSR 75 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHH-----HCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCC
Confidence 489999999999999999999 7899999999974321 0000 111
Q ss_pred cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHH
Q 030483 59 QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYEL 138 (176)
Q Consensus 59 ~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~ 138 (176)
..++....++|+.++.|++++|++. ++++|+++||...+. .+..+....+...
T Consensus 76 ~~~~~~~~~~~~~~~~~l~~aa~~~-----gvkr~I~~Ss~~~~~----------------------~~~~~~~~~K~~~ 128 (317)
T CHL00194 76 PSDLYNAKQIDWDGKLALIEAAKAA-----KIKRFIFFSILNAEQ----------------------YPYIPLMKLKSDI 128 (317)
T ss_pred CCCccchhhhhHHHHHHHHHHHHHc-----CCCEEEEeccccccc----------------------cCCChHHHHHHHH
Confidence 2233456788999999999999987 688999998742210 0000111223344
Q ss_pred HHHHHhhCCCceEEEeccCceEeC
Q 030483 139 EDVSASYSPAITYSVHRSSVIIGA 162 (176)
Q Consensus 139 e~~~~~~~~g~~~~ivRp~~v~G~ 162 (176)
|+++. ..+++++|+||+.+|+.
T Consensus 129 e~~l~--~~~l~~tilRp~~~~~~ 150 (317)
T CHL00194 129 EQKLK--KSGIPYTIFRLAGFFQG 150 (317)
T ss_pred HHHHH--HcCCCeEEEeecHHhhh
Confidence 55554 57899999999988864
No 51
>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]
Probab=99.64 E-value=2e-15 Score=119.31 Aligned_cols=135 Identities=17% Similarity=0.112 Sum_probs=91.4
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC----CCC-----CCC----------CC-------------c
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP----PPG-----WFP----------TA-------------L 57 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~----~~~-----~~~----------~~-------------~ 57 (176)
+++|||||.||||++.+..+...+|. +..+.++.-. ... +.. +. .
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~p~---~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~ 83 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKYPD---YKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDT 83 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCCCC---CcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhh
Confidence 78999999999999999999942222 2333332210 110 000 00 0
Q ss_pred c------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCC
Q 030483 58 V------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKED 125 (176)
Q Consensus 58 v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~ 125 (176)
| ..++-+....|+.+|..|+++++.. + +++++|++|+..|||.... ..-..|.
T Consensus 84 vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~s---g-~i~~fvhvSTdeVYGds~~-----------~~~~~E~ 148 (331)
T KOG0747|consen 84 VIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVS---G-NIRRFVHVSTDEVYGDSDE-----------DAVVGEA 148 (331)
T ss_pred hhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhc---c-CeeEEEEecccceecCccc-----------ccccccc
Confidence 0 2345667789999999999999987 3 7999999999999996531 1222377
Q ss_pred CCCCCCCcchHHHHHHHHh-------hCCCceEEEeccCceEeCCC
Q 030483 126 SSRLPFPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 126 ~~~~~~~~~y~~~e~~~~~-------~~~g~~~~ivRp~~v~G~~~ 164 (176)
+.+. |...|++.|+..| +.++++++++|.++||||++
T Consensus 149 s~~n--PtnpyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q 192 (331)
T KOG0747|consen 149 SLLN--PTNPYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQ 192 (331)
T ss_pred ccCC--CCCchHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCc
Confidence 6654 3333444444433 68899999999999999997
No 52
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=99.64 E-value=4.2e-15 Score=121.81 Aligned_cols=132 Identities=19% Similarity=0.162 Sum_probs=87.6
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCC--cEEEEEecCCCCC---------------C------CC------C------
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPG---------------W------FP------T------ 55 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~~---------------~------~~------~------ 55 (176)
+|||||||||||++|+++|+ .+| ++|++++|+.... + .. +
T Consensus 1 ~vlvtGatG~lG~~l~~~L~-----~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 75 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELL-----RRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRL 75 (367)
T ss_pred CEEEeccchHHHHHHHHHHH-----hCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccC
Confidence 58999999999999999999 577 6799999975410 0 00 0
Q ss_pred --------------Ccc---------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCcc
Q 030483 56 --------------ALV---------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 112 (176)
Q Consensus 56 --------------~~v---------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~ 112 (176)
+.+ ..+..+..++|+.++.++++++.+. ++++|+++||..+|+...
T Consensus 76 gl~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~-----~~~~~v~iSS~~v~~~~~------ 144 (367)
T TIGR01746 76 GLSDAEWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASG-----RAKPLHYVSTISVLAAID------ 144 (367)
T ss_pred CcCHHHHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhC-----CCceEEEEccccccCCcC------
Confidence 000 1123445679999999999999887 567899999999986321
Q ss_pred CCCCCCCccccCCCCCCC----CCcchH----HHHHHHHh-hCCCceEEEeccCceEeCCC
Q 030483 113 GQLMPYEVPFKEDSSRLP----FPNFYY----ELEDVSAS-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 113 g~~~~~~~p~~E~~~~~~----~~~~y~----~~e~~~~~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
..++.|+++..+ ....|. ..|+++.+ ...|++++++||+.+||+..
T Consensus 145 ------~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~ 199 (367)
T TIGR01746 145 ------LSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSY 199 (367)
T ss_pred ------CCCccccccccccccccCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCC
Confidence 112233332211 112232 23444443 34489999999999999843
No 53
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=99.63 E-value=5.1e-15 Score=116.81 Aligned_cols=132 Identities=17% Similarity=0.190 Sum_probs=94.4
Q ss_pred EEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC----------CC--------CCcc------------cCc
Q 030483 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----------FP--------TALV------------QES 61 (176)
Q Consensus 12 vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~----------~~--------~~~v------------~~~ 61 (176)
|+|||||||||++|+.+|. ..||+|+.++|++.... .. .+.| |..
T Consensus 1 IliTGgTGlIG~~L~~~L~-----~~gh~v~iltR~~~~~~~~~~~~v~~~~~~~~~~~~~~DavINLAG~~I~~rrWt~ 75 (297)
T COG1090 1 ILITGGTGLIGRALTARLR-----KGGHQVTILTRRPPKASQNLHPNVTLWEGLADALTLGIDAVINLAGEPIAERRWTE 75 (297)
T ss_pred CeEeccccchhHHHHHHHH-----hCCCeEEEEEcCCcchhhhcCccccccchhhhcccCCCCEEEECCCCccccccCCH
Confidence 6899999999999999999 79999999999976521 10 1111 222
Q ss_pred --HHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcch----
Q 030483 62 --EEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFY---- 135 (176)
Q Consensus 62 --~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y---- 135 (176)
.+++++.-+..|+.|++++.+. ..+++.++..|.+..||.. ....++|+++.. ..|-
T Consensus 76 ~~K~~i~~SRi~~T~~L~e~I~~~---~~~P~~~isaSAvGyYG~~------------~~~~~tE~~~~g--~~Fla~lc 138 (297)
T COG1090 76 KQKEEIRQSRINTTEKLVELIAAS---ETKPKVLISASAVGYYGHS------------GDRVVTEESPPG--DDFLAQLC 138 (297)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhc---cCCCcEEEecceEEEecCC------------CceeeecCCCCC--CChHHHHH
Confidence 2456777788899999999876 5567777766666677732 257899997643 2332
Q ss_pred HHHHHHHHh-hCCCceEEEeccCceEeCCCC
Q 030483 136 YELEDVSAS-YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 136 ~~~e~~~~~-~~~g~~~~ivRp~~v~G~~~~ 165 (176)
+..|+.... ...|.+++++|.++|.|+..+
T Consensus 139 ~~WE~~a~~a~~~gtRvvllRtGvVLs~~GG 169 (297)
T COG1090 139 QDWEEEALQAQQLGTRVVLLRTGVVLSPDGG 169 (297)
T ss_pred HHHHHHHhhhhhcCceEEEEEEEEEecCCCc
Confidence 223443333 456899999999999998865
No 54
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=99.63 E-value=3.5e-15 Score=122.20 Aligned_cols=124 Identities=19% Similarity=0.114 Sum_probs=84.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCC--cEEEEEecCCCCC--------CCC--------------------CCc
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPG--------WFP--------------------TAL 57 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~~--------~~~--------------------~~~ 57 (176)
++|++|||||+||||++|+++|+ +.| ++|++++|+.... ... .+.
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~-----~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~ 77 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLL-----ENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDY 77 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCE
Confidence 45799999999999999999999 454 7899998864320 000 001
Q ss_pred c------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCC
Q 030483 58 V------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKED 125 (176)
Q Consensus 58 v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~ 125 (176)
| ..++.+.+++|+.++.++++++.+. ++++|+++||...+ .|
T Consensus 78 Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~-----~~~~iV~~SS~~~~-----------------~p---- 131 (324)
T TIGR03589 78 VVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDN-----GVKRVVALSTDKAA-----------------NP---- 131 (324)
T ss_pred EEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEeCCCCC-----------------CC----
Confidence 1 1234568899999999999999987 56799999873211 11
Q ss_pred CCCCCCCcchHHHHHHHHh-----hCCCceEEEeccCceEeCCC
Q 030483 126 SSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 126 ~~~~~~~~~y~~~e~~~~~-----~~~g~~~~ivRp~~v~G~~~ 164 (176)
..++.......|.++.. ...|++++++||++||||+.
T Consensus 132 --~~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~ 173 (324)
T TIGR03589 132 --INLYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRG 173 (324)
T ss_pred --CCHHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCC
Confidence 11111122333444422 25689999999999999874
No 55
>PLN02996 fatty acyl-CoA reductase
Probab=99.62 E-value=7.2e-15 Score=126.69 Aligned_cols=88 Identities=17% Similarity=0.128 Sum_probs=65.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCC---cEEEEEecCCCCCC-------------------------------C
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSP---WKVYGAARRPPPGW-------------------------------F 53 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g---~~V~~l~R~~~~~~-------------------------------~ 53 (176)
.+++|||||||||||++|++.|++ .+ -+|+++.|...... .
T Consensus 10 ~~k~VlvTGaTGFlG~~ll~~LL~-----~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~ 84 (491)
T PLN02996 10 ENKTILVTGATGFLAKIFVEKILR-----VQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISE 84 (491)
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHh-----hCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhc
Confidence 468999999999999999999993 32 25788888643100 0
Q ss_pred C----------------C-----------Ccc---------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEec
Q 030483 54 P----------------T-----------ALV---------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLT 97 (176)
Q Consensus 54 ~----------------~-----------~~v---------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~S 97 (176)
. + +.| ..++....++|+.+|.+++++|.+. .++++++++|
T Consensus 85 kv~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~----~~~k~~V~vS 160 (491)
T PLN02996 85 KVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKC----VKVKMLLHVS 160 (491)
T ss_pred CEEEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhc----CCCCeEEEEe
Confidence 0 0 000 2345677899999999999999875 2578999999
Q ss_pred cceeecc
Q 030483 98 GTKHYMG 104 (176)
Q Consensus 98 s~~~yg~ 104 (176)
|..+||.
T Consensus 161 T~~vyG~ 167 (491)
T PLN02996 161 TAYVCGE 167 (491)
T ss_pred eeEEecC
Confidence 9999984
No 56
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.60 E-value=4e-15 Score=132.43 Aligned_cols=146 Identities=16% Similarity=0.103 Sum_probs=91.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEE-EEEecCCCC-CC------CCCCcc---------------cCcHHH
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKV-YGAARRPPP-GW------FPTALV---------------QESEEV 64 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V-~~l~R~~~~-~~------~~~~~v---------------~~~~~~ 64 (176)
++|+||||||+||||++|+++|. ++|++| +...+-... .. ...+.| ..++.+
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~-----~~g~~v~~~~~~l~d~~~v~~~i~~~~pd~Vih~Aa~~~~~~~~~~~~~~~~ 453 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCE-----KQGIAYEYGKGRLEDRSSLLADIRNVKPTHVFNAAGVTGRPNVDWCESHKVE 453 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHH-----hCCCeEEeeccccccHHHHHHHHHhhCCCEEEECCcccCCCCCChHHhCHHH
Confidence 45789999999999999999999 689998 333321110 00 000111 124567
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHHHHHHHh
Q 030483 65 NIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS 144 (176)
Q Consensus 65 ~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~ 144 (176)
.+++|+.++.+++++|++. +++ +++.||..+|+.... ...+ ...|++|+++..+ +...|...|+..|
T Consensus 454 ~~~~N~~gt~~l~~a~~~~-----g~~-~v~~Ss~~v~~~~~~--~~~~----~~~p~~E~~~~~~-~~~~Yg~sK~~~E 520 (668)
T PLN02260 454 TIRANVVGTLTLADVCREN-----GLL-MMNFATGCIFEYDAK--HPEG----SGIGFKEEDKPNF-TGSFYSKTKAMVE 520 (668)
T ss_pred HHHHHhHHHHHHHHHHHHc-----CCe-EEEEcccceecCCcc--cccc----cCCCCCcCCCCCC-CCChhhHHHHHHH
Confidence 7899999999999999998 565 456677788853100 0000 1357889876543 3334555555544
Q ss_pred ---hCCCceEEEeccCceEeCCC---CCCCCCCC
Q 030483 145 ---YSPAITYSVHRSSVIIGASP---RSLYXXXX 172 (176)
Q Consensus 145 ---~~~g~~~~ivRp~~v~G~~~---~~~~~~~~ 172 (176)
..+ .++.++|+.++||... .||+..++
T Consensus 521 ~~~~~~-~~~~~~r~~~~~~~~~~~~~nfv~~~~ 553 (668)
T PLN02260 521 ELLREY-DNVCTLRVRMPISSDLSNPRNFITKIS 553 (668)
T ss_pred HHHHhh-hhheEEEEEEecccCCCCccHHHHHHh
Confidence 223 4678889999997542 35544443
No 57
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=99.58 E-value=3.8e-15 Score=111.82 Aligned_cols=123 Identities=19% Similarity=0.269 Sum_probs=81.6
Q ss_pred EEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC--CCCCcc------------------------cCcHHHH
Q 030483 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--FPTALV------------------------QESEEVN 65 (176)
Q Consensus 12 vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~--~~~~~v------------------------~~~~~~~ 65 (176)
|+|+||||++|++|+++|+ ++||+|++++|++.+.. ...+.+ .....
T Consensus 1 I~V~GatG~vG~~l~~~L~-----~~~~~V~~~~R~~~~~~~~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~-- 73 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLL-----RRGHEVTALVRSPSKAEDSPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPK-- 73 (183)
T ss_dssp EEEETTTSHHHHHHHHHHH-----HTTSEEEEEESSGGGHHHCTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTT--
T ss_pred eEEECCCChHHHHHHHHHH-----HCCCEEEEEecCchhcccccccccceeeehhhhhhhhhhhhcchhhhhhhhhcc--
Confidence 7999999999999999999 68899999999976421 111110 00111
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHHHHHHHh-
Q 030483 66 IFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS- 144 (176)
Q Consensus 66 ~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~- 144 (176)
....+.++++++++. ++++++++|+..+|.... .....+..+ ....|+.......+
T Consensus 74 ---~~~~~~~~~~a~~~~-----~~~~~v~~s~~~~~~~~~------------~~~~~~~~~---~~~~~~~~~~~~e~~ 130 (183)
T PF13460_consen 74 ---DVDAAKNIIEAAKKA-----GVKRVVYLSSAGVYRDPP------------GLFSDEDKP---IFPEYARDKREAEEA 130 (183)
T ss_dssp ---HHHHHHHHHHHHHHT-----TSSEEEEEEETTGTTTCT------------SEEEGGTCG---GGHHHHHHHHHHHHH
T ss_pred ---ccccccccccccccc-----ccccceeeeccccCCCCC------------ccccccccc---chhhhHHHHHHHHHH
Confidence 266778999999997 688999999988876321 111111111 11334432222222
Q ss_pred -hCCCceEEEeccCceEeCCC
Q 030483 145 -YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 145 -~~~g~~~~ivRp~~v~G~~~ 164 (176)
++.+++|+++||+.+||+..
T Consensus 131 ~~~~~~~~~ivrp~~~~~~~~ 151 (183)
T PF13460_consen 131 LRESGLNWTIVRPGWIYGNPS 151 (183)
T ss_dssp HHHSTSEEEEEEESEEEBTTS
T ss_pred HHhcCCCEEEEECcEeEeCCC
Confidence 34599999999999999974
No 58
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=99.57 E-value=2.7e-15 Score=118.54 Aligned_cols=136 Identities=21% Similarity=0.273 Sum_probs=71.1
Q ss_pred EEcCChHHHHHHHHHhhCCCCCCCCc--EEEEEecCCCCC---------------CCC-----CCcc-------------
Q 030483 14 IIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPPPG---------------WFP-----TALV------------- 58 (176)
Q Consensus 14 VtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~~~---------------~~~-----~~~v------------- 58 (176)
|||||||+|++|+++|+ ..+. +|+++.|..... +.. .+.+
T Consensus 1 lTGaTGflG~~ll~~Ll-----~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lG 75 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELL-----RQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLG 75 (249)
T ss_dssp EE-TTSHHHHHHHHHHH-----HHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG
T ss_pred CcCCCcHHHHHHHHHHH-----cCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccC
Confidence 79999999999999999 4554 899999976320 000 0000
Q ss_pred -------------------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccC
Q 030483 59 -------------------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 113 (176)
Q Consensus 59 -------------------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g 113 (176)
..+.++..++|+.+|+++++.|.+. +.++|+|+||..+.+... +
T Consensus 76 L~~~~~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~-----~~~~~~~iSTa~v~~~~~------~ 144 (249)
T PF07993_consen 76 LSDEDYQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQG-----KRKRFHYISTAYVAGSRP------G 144 (249)
T ss_dssp --HHHHHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSS-----S---EEEEEEGGGTTS-T------T
T ss_pred CChHHhhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhc-----cCcceEEeccccccCCCC------C
Confidence 2244567889999999999999865 345899999943333110 1
Q ss_pred CCCCCCcc--ccCCC--CCCCCCcchHHHHHHHHh-------hCCCceEEEeccCceEeCCCCCCC
Q 030483 114 QLMPYEVP--FKEDS--SRLPFPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASPRSLY 168 (176)
Q Consensus 114 ~~~~~~~p--~~E~~--~~~~~~~~y~~~e~~~~~-------~~~g~~~~ivRp~~v~G~~~~~~~ 168 (176)
.. ...+ ..|++ +....++ .|.++|++.| .+.|++++|+||+.|+|.......
T Consensus 145 ~~--~~~~~~~~~~~~~~~~~~~~-gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~ 207 (249)
T PF07993_consen 145 TI--EEKVYPEEEDDLDPPQGFPN-GYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWW 207 (249)
T ss_dssp T----SSS-HHH--EEE--TTSEE--HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS--
T ss_pred cc--cccccccccccchhhccCCc-cHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCcee
Confidence 00 0011 11221 1111223 3554444444 234899999999999995443333
No 59
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=99.56 E-value=1.3e-14 Score=114.51 Aligned_cols=132 Identities=13% Similarity=0.091 Sum_probs=84.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------CCCCC----------------------cc-
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------WFPTA----------------------LV- 58 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~----------------------~v- 58 (176)
.+|+||||||||+||++|+++|+ ..||+|+++.|++... ..... .+
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~-----~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi 90 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLL-----AKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVI 90 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHH-----hCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEE
Confidence 35799999999999999999999 6899999999864321 00000 00
Q ss_pred -----c--CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCC
Q 030483 59 -----Q--ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPF 131 (176)
Q Consensus 59 -----~--~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~ 131 (176)
. .++...+++|..++.++++++.+. ++++|+++||..+|+... ..+..+.+... .
T Consensus 91 ~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~-----~~~~iV~iSS~~v~g~~~------------~~~~~~~~~~~-~ 152 (251)
T PLN00141 91 CATGFRRSFDPFAPWKVDNFGTVNLVEACRKA-----GVTRFILVSSILVNGAAM------------GQILNPAYIFL-N 152 (251)
T ss_pred ECCCCCcCCCCCCceeeehHHHHHHHHHHHHc-----CCCEEEEEccccccCCCc------------ccccCcchhHH-H
Confidence 0 011122456778899999999876 578999999998886321 11222211100 0
Q ss_pred C-cchH----HHHHHHHhhCCCceEEEeccCceEeCCC
Q 030483 132 P-NFYY----ELEDVSASYSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 132 ~-~~y~----~~e~~~~~~~~g~~~~ivRp~~v~G~~~ 164 (176)
+ ..++ ..|+++ +..+++++++||+++++...
T Consensus 153 ~~~~~~~~k~~~e~~l--~~~gi~~~iirpg~~~~~~~ 188 (251)
T PLN00141 153 LFGLTLVAKLQAEKYI--RKSGINYTIVRPGGLTNDPP 188 (251)
T ss_pred HHHHHHHHHHHHHHHH--HhcCCcEEEEECCCccCCCC
Confidence 0 1111 122222 35689999999999998653
No 60
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=99.55 E-value=2.4e-14 Score=120.25 Aligned_cols=123 Identities=20% Similarity=0.200 Sum_probs=83.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------------CCCC--------------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------------WFPT-------------------- 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------------~~~~-------------------- 55 (176)
..++|||||||||||++++++|+ ++||+|++++|+.... ....
T Consensus 59 ~~~kVLVtGatG~IG~~l~~~Ll-----~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~ 133 (390)
T PLN02657 59 KDVTVLVVGATGYIGKFVVRELV-----RRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE 133 (390)
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh
Confidence 35789999999999999999999 6899999999975310 0000
Q ss_pred ----Ccc-------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccC
Q 030483 56 ----ALV-------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKE 124 (176)
Q Consensus 56 ----~~v-------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E 124 (176)
+.| .......+++|..++.++++++++. ++++||++||..+|+ |..+
T Consensus 134 ~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~-----gv~r~V~iSS~~v~~-----------------p~~~ 191 (390)
T PLN02657 134 GDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREV-----GAKHFVLLSAICVQK-----------------PLLE 191 (390)
T ss_pred CCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHc-----CCCEEEEEeeccccC-----------------cchH
Confidence 011 0111345678999999999999987 678999999875542 1111
Q ss_pred CCCCCCCCcchHHHHHHHHhhCCCceEEEeccCceEeCC
Q 030483 125 DSSRLPFPNFYYELEDVSASYSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 125 ~~~~~~~~~~y~~~e~~~~~~~~g~~~~ivRp~~v~G~~ 163 (176)
........|+.+.+...+++++|+||+++||+-
T Consensus 192 ------~~~sK~~~E~~l~~~~~gl~~tIlRp~~~~~~~ 224 (390)
T PLN02657 192 ------FQRAKLKFEAELQALDSDFTYSIVRPTAFFKSL 224 (390)
T ss_pred ------HHHHHHHHHHHHHhccCCCCEEEEccHHHhccc
Confidence 001122233333322478999999999999853
No 61
>PRK12320 hypothetical protein; Provisional
Probab=99.54 E-value=7.2e-14 Score=124.03 Aligned_cols=113 Identities=19% Similarity=0.146 Sum_probs=78.9
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC-C-------------------CCcc----cCcHHHH
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-P-------------------TALV----QESEEVN 65 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~-~-------------------~~~v----~~~~~~~ 65 (176)
|+||||||+||||++|+++|+ ++||+|++++|.+..... . .+.| .......
T Consensus 1 MkILVTGAaGFIGs~La~~Ll-----~~G~~Vi~ldr~~~~~~~~~ve~v~~Dl~d~~l~~al~~~D~VIHLAa~~~~~~ 75 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLI-----AAGHTVSGIAQHPHDALDPRVDYVCASLRNPVLQELAGEADAVIHLAPVDTSAP 75 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHH-----hCCCEEEEEeCChhhcccCCceEEEccCCCHHHHHHhcCCCEEEEcCccCccch
Confidence 379999999999999999999 799999999986432110 0 0111 1111122
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHHHHHHHhh
Q 030483 66 IFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSASY 145 (176)
Q Consensus 66 ~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~~ 145 (176)
..+|+.++.|++++|++. ++ +++++||. ||.+ + .|...|.++.
T Consensus 76 ~~vNv~Gt~nLleAA~~~-----Gv-RiV~~SS~--~G~~------------------~---------~~~~aE~ll~-- 118 (699)
T PRK12320 76 GGVGITGLAHVANAAARA-----GA-RLLFVSQA--AGRP------------------E---------LYRQAETLVS-- 118 (699)
T ss_pred hhHHHHHHHHHHHHHHHc-----CC-eEEEEECC--CCCC------------------c---------cccHHHHHHH--
Confidence 358999999999999987 45 58888864 3310 0 1123466554
Q ss_pred CCCceEEEeccCceEeCCC
Q 030483 146 SPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 146 ~~g~~~~ivRp~~v~G~~~ 164 (176)
..+++++|+|++++|||+.
T Consensus 119 ~~~~p~~ILR~~nVYGp~~ 137 (699)
T PRK12320 119 TGWAPSLVIRIAPPVGRQL 137 (699)
T ss_pred hcCCCEEEEeCceecCCCC
Confidence 3568999999999999975
No 62
>PLN02503 fatty acyl-CoA reductase 2
Probab=99.50 E-value=3.7e-13 Score=118.08 Aligned_cols=88 Identities=17% Similarity=0.106 Sum_probs=65.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc---EEEEEecCCCCC---------C----------------------C
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW---KVYGAARRPPPG---------W----------------------F 53 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~---~V~~l~R~~~~~---------~----------------------~ 53 (176)
.+++|||||||||||.+|+++|++ .+. +|+++.|..... . .
T Consensus 118 ~~k~VlVTGaTGFLGk~LlekLLr-----~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~ 192 (605)
T PLN02503 118 RGKNFLITGATGFLAKVLIEKILR-----TNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLS 192 (605)
T ss_pred cCCEEEEcCCchHHHHHHHHHHHH-----hCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccc
Confidence 368999999999999999999993 332 689998854210 0 0
Q ss_pred C---------CC-----------------cc---------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEecc
Q 030483 54 P---------TA-----------------LV---------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG 98 (176)
Q Consensus 54 ~---------~~-----------------~v---------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss 98 (176)
. ++ .| ..+++...++|+.++.+++++|.+. ..+++++++||
T Consensus 193 Ki~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~----~~lk~fV~vST 268 (605)
T PLN02503 193 KLVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKC----KKLKLFLQVST 268 (605)
T ss_pred cEEEEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHc----CCCCeEEEccC
Confidence 0 00 00 2245677899999999999999876 25788999999
Q ss_pred ceeecc
Q 030483 99 TKHYMG 104 (176)
Q Consensus 99 ~~~yg~ 104 (176)
..+||.
T Consensus 269 ayVyG~ 274 (605)
T PLN02503 269 AYVNGQ 274 (605)
T ss_pred ceeecC
Confidence 999984
No 63
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=99.50 E-value=9.9e-14 Score=111.47 Aligned_cols=116 Identities=16% Similarity=0.154 Sum_probs=78.1
Q ss_pred EEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------CC--CC------------------------
Q 030483 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------WF--PT------------------------ 55 (176)
Q Consensus 12 vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~--~~------------------------ 55 (176)
||||||+|.||+.||++|++ .+..+++.++|+.... .. ..
T Consensus 1 VLVTGa~GSIGseL~rql~~----~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~ 76 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLR----YGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY 76 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHC----CB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--
T ss_pred CEEEccccHHHHHHHHHHHh----cCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc
Confidence 79999999999999999994 3335799999873210 00 00
Q ss_pred --Ccc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCcc
Q 030483 56 --ALV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVP 121 (176)
Q Consensus 56 --~~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p 121 (176)
+.| ..++.+..++|+.||.|++++|.++ ++++|+++||-++.
T Consensus 77 ~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~-----~v~~~v~ISTDKAv------------------- 132 (293)
T PF02719_consen 77 KPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEH-----GVERFVFISTDKAV------------------- 132 (293)
T ss_dssp T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHT-----T-SEEEEEEECGCS-------------------
T ss_pred CCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEccccccC-------------------
Confidence 000 4578889999999999999999998 79999999985442
Q ss_pred ccCCCCCCCCCcchHHHHHHHHh-----h-----CCCceEEEeccCceEeCCC
Q 030483 122 FKEDSSRLPFPNFYYELEDVSAS-----Y-----SPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 122 ~~E~~~~~~~~~~y~~~e~~~~~-----~-----~~g~~~~ivRp~~v~G~~~ 164 (176)
.|..-++..|.+.| . ..+..++++|.+||+|-+.
T Consensus 133 ---------~PtnvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~G 176 (293)
T PF02719_consen 133 ---------NPTNVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRG 176 (293)
T ss_dssp ---------S--SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTT
T ss_pred ---------CCCcHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCC
Confidence 12333444443433 1 1247899999999999763
No 64
>PRK05865 hypothetical protein; Provisional
Probab=99.49 E-value=2.4e-13 Score=122.90 Aligned_cols=110 Identities=20% Similarity=0.273 Sum_probs=81.6
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC-CC--------------------Ccc---cCcHHHH
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-PT--------------------ALV---QESEEVN 65 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~-~~--------------------~~v---~~~~~~~ 65 (176)
|+||||||+||||++|+++|+ .+||+|++++|+....+. .. +.| .......
T Consensus 1 MkILVTGATGfIGs~La~~Ll-----~~G~~Vv~l~R~~~~~~~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~~~~ 75 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLL-----SQGHEVVGIARHRPDSWPSSADFIAADIRDATAVESAMTGADVVAHCAWVRGRN 75 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHH-----HCcCEEEEEECCchhhcccCceEEEeeCCCHHHHHHHHhCCCEEEECCCcccch
Confidence 479999999999999999999 799999999997432110 00 011 1111125
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHHHHHHHhh
Q 030483 66 IFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSASY 145 (176)
Q Consensus 66 ~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~~ 145 (176)
+++|+.++.+++++|++. ++++||++||. . ....|+++.
T Consensus 76 ~~vNv~GT~nLLeAa~~~-----gvkr~V~iSS~-------------------~---------------K~aaE~ll~-- 114 (854)
T PRK05865 76 DHINIDGTANVLKAMAET-----GTGRIVFTSSG-------------------H---------------QPRVEQMLA-- 114 (854)
T ss_pred HHHHHHHHHHHHHHHHHc-----CCCeEEEECCc-------------------H---------------HHHHHHHHH--
Confidence 689999999999999987 57899998862 1 234566554
Q ss_pred CCCceEEEeccCceEeCCCC
Q 030483 146 SPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 146 ~~g~~~~ivRp~~v~G~~~~ 165 (176)
.++++++++||++||||+..
T Consensus 115 ~~gl~~vILRp~~VYGP~~~ 134 (854)
T PRK05865 115 DCGLEWVAVRCALIFGRNVD 134 (854)
T ss_pred HcCCCEEEEEeceEeCCChH
Confidence 46899999999999999753
No 65
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.44 E-value=8.6e-13 Score=104.63 Aligned_cols=136 Identities=21% Similarity=0.094 Sum_probs=99.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC--C------C---CCCcc------------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--W------F---PTALV------------------ 58 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~------~---~~~~v------------------ 58 (176)
|.|++||||-||+-|++|++.|+ +.||+|+++.|+.... . . .+..+
T Consensus 1 ~~K~ALITGITGQDGsYLa~lLL-----ekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~ 75 (345)
T COG1089 1 MGKVALITGITGQDGSYLAELLL-----EKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILE 75 (345)
T ss_pred CCceEEEecccCCchHHHHHHHH-----hcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHH
Confidence 46889999999999999999999 8999999999874321 0 0 00000
Q ss_pred -------------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCC
Q 030483 59 -------------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYE 119 (176)
Q Consensus 59 -------------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~ 119 (176)
++.|....+++..||.++||+++.. +++-.+|..+||+.-||.. ..
T Consensus 76 ~v~PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~---~~~~~rfYQAStSE~fG~v------------~~ 140 (345)
T COG1089 76 EVQPDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRIL---GEKKTRFYQASTSELYGLV------------QE 140 (345)
T ss_pred hcCchhheeccccccccccccCcceeeeechhHHHHHHHHHHHh---CCcccEEEecccHHhhcCc------------cc
Confidence 4566777889999999999999987 4434678888999999843 25
Q ss_pred ccccCCCCCCCCCcchHHHHHHHHh-------hCCCceEEEeccCceEeCCCC
Q 030483 120 VPFKEDSSRLPFPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 120 ~p~~E~~~~~~~~~~y~~~e~~~~~-------~~~g~~~~ivRp~~v~G~~~~ 165 (176)
.|.+|+.|.. |.+.|+..|+-.- ..+|+-++.=..+|-=+|.++
T Consensus 141 ~pq~E~TPFy--PrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rg 191 (345)
T COG1089 141 IPQKETTPFY--PRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRG 191 (345)
T ss_pred CccccCCCCC--CCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCc
Confidence 7899999875 5555666665533 356777776666666666553
No 66
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=99.43 E-value=1.2e-12 Score=113.70 Aligned_cols=127 Identities=14% Similarity=0.104 Sum_probs=84.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC-------------------CCC-------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------------------FPT------------- 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-------------------~~~------------- 55 (176)
.++++|||||+|+||++|+++|+ +.|++|++++|+..... ...
T Consensus 79 ~gKvVLVTGATGgIG~aLAr~LL-----k~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI 153 (576)
T PLN03209 79 DEDLAFVAGATGKVGSRTVRELL-----KLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQI 153 (576)
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHH
Confidence 56889999999999999999999 69999999998643210 000
Q ss_pred -------Ccc------c----CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCC
Q 030483 56 -------ALV------Q----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPY 118 (176)
Q Consensus 56 -------~~v------~----~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~ 118 (176)
+.| . .++...+++|..++.++++++.+. ++++||++||...+..
T Consensus 154 ~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~a-----gVgRIV~VSSiga~~~-------------- 214 (576)
T PLN03209 154 GPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVA-----KVNHFILVTSLGTNKV-------------- 214 (576)
T ss_pred HHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHh-----CCCEEEEEccchhccc--------------
Confidence 000 0 123445788999999999999887 5789999998654210
Q ss_pred CccccCCCCCCCCCcchHH----HHHHHHhhCCCceEEEeccCceEeCCC
Q 030483 119 EVPFKEDSSRLPFPNFYYE----LEDVSASYSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 119 ~~p~~E~~~~~~~~~~y~~----~e~~~~~~~~g~~~~ivRp~~v~G~~~ 164 (176)
..+ +. ... .-..|+. .|+.+ ...|++|++|||++++++..
T Consensus 215 g~p--~~-~~~-sk~~~~~~KraaE~~L--~~sGIrvTIVRPG~L~tp~d 258 (576)
T PLN03209 215 GFP--AA-ILN-LFWGVLCWKRKAEEAL--IASGLPYTIVRPGGMERPTD 258 (576)
T ss_pred Ccc--cc-chh-hHHHHHHHHHHHHHHH--HHcCCCEEEEECCeecCCcc
Confidence 001 11 011 0111222 23333 35799999999999998743
No 67
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.43 E-value=2.1e-12 Score=110.65 Aligned_cols=125 Identities=15% Similarity=0.099 Sum_probs=87.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------C-CCC----------------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------W-FPT---------------------- 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~-~~~---------------------- 55 (176)
.+|+||||||+|-||+.||+++++ .+.-+++.++|+.... . +..
T Consensus 249 ~gK~vLVTGagGSiGsel~~qil~----~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~ 324 (588)
T COG1086 249 TGKTVLVTGGGGSIGSELCRQILK----FNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH 324 (588)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHh----cCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC
Confidence 479999999999999999999995 4445788888875431 0 000
Q ss_pred --Ccc------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCcc
Q 030483 56 --ALV------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVP 121 (176)
Q Consensus 56 --~~v------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p 121 (176)
+.| ..+|.|.+++|+.||.|++++|.+. ++++||++|+-++..
T Consensus 325 kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~-----~V~~~V~iSTDKAV~------------------ 381 (588)
T COG1086 325 KVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKN-----GVKKFVLISTDKAVN------------------ 381 (588)
T ss_pred CCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHh-----CCCEEEEEecCcccC------------------
Confidence 001 4578899999999999999999998 799999999744321
Q ss_pred ccCCCCCCCCCcchHHHHHHHHh--h-CC--CceEEEeccCceEeCCC
Q 030483 122 FKEDSSRLPFPNFYYELEDVSAS--Y-SP--AITYSVHRSSVIIGASP 164 (176)
Q Consensus 122 ~~E~~~~~~~~~~y~~~e~~~~~--~-~~--g~~~~ivRp~~v~G~~~ 164 (176)
|.+-..-.+..+|+++.. + .. +.+.+++|.|||.|.++
T Consensus 382 -----PtNvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrG 424 (588)
T COG1086 382 -----PTNVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRG 424 (588)
T ss_pred -----CchHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCC
Confidence 111000112223554443 1 22 47899999999999874
No 68
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=99.43 E-value=2.3e-12 Score=122.57 Aligned_cols=145 Identities=13% Similarity=0.107 Sum_probs=90.0
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCC----cEEEEEecCCCCC---------------C-----CC----------
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSP----WKVYGAARRPPPG---------------W-----FP---------- 54 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g----~~V~~l~R~~~~~---------------~-----~~---------- 54 (176)
.++|||||||||||++|+++|+ ..+ +.|+++.|..... + ..
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll-----~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~ 1045 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLL-----TRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSK 1045 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHH-----hcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCC
Confidence 4789999999999999999999 344 7899999963210 0 00
Q ss_pred ----------------CCcc---------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCC
Q 030483 55 ----------------TALV---------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDP 109 (176)
Q Consensus 55 ----------------~~~v---------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~ 109 (176)
.+.| ..........|+.++.++++++.+. ++++|+|+||.++|+....
T Consensus 1046 ~~lgl~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~-----~~~~~v~vSS~~v~~~~~~-- 1118 (1389)
T TIGR03443 1046 EKFGLSDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEG-----KAKQFSFVSSTSALDTEYY-- 1118 (1389)
T ss_pred ccCCcCHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhC-----CCceEEEEeCeeecCcccc--
Confidence 0000 1122334468999999999999876 5789999999999973210
Q ss_pred CccCCC--CCCCccccCCCCCCC---CCcchHHHHHH-----HHh-hCCCceEEEeccCceEeCCCC
Q 030483 110 SLAGQL--MPYEVPFKEDSSRLP---FPNFYYELEDV-----SAS-YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 110 ~~~g~~--~~~~~p~~E~~~~~~---~~~~y~~~e~~-----~~~-~~~g~~~~ivRp~~v~G~~~~ 165 (176)
....+. .....++.|+.+..+ .+...|...|+ +.+ ...|++++|+||++|||++..
T Consensus 1119 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~ 1185 (1389)
T TIGR03443 1119 VNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKT 1185 (1389)
T ss_pred cchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCc
Confidence 000000 000112344432211 11222444444 433 345899999999999999763
No 69
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=99.34 E-value=1.9e-11 Score=97.96 Aligned_cols=114 Identities=16% Similarity=0.123 Sum_probs=73.0
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC-CCCCcc---cCcHH---HHHH----------------
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALV---QESEE---VNIF---------------- 67 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v---~~~~~---~~~~---------------- 67 (176)
+||||||||+||++++++|+ ++||+|++++|++.... .....+ ..+++ +.++
T Consensus 1 ~ilVtGatG~iG~~vv~~L~-----~~g~~V~~~~R~~~~~~~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~ 75 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQ-----AASVPFLVASRSSSSSAGPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVA 75 (285)
T ss_pred CEEEEcCCChHHHHHHHHHH-----hCCCcEEEEeCCCccccCCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeC
Confidence 48999999999999999999 68999999999875321 111111 11111 1110
Q ss_pred ----HHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHHHHHHH
Q 030483 68 ----KNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSA 143 (176)
Q Consensus 68 ----~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~ 143 (176)
.....+.++++++++. +++|||+.||..++. . .+ .....+.++.
T Consensus 76 ~~~~~~~~~~~~~i~aa~~~-----gv~~~V~~Ss~~~~~---------------~------~~------~~~~~~~~l~ 123 (285)
T TIGR03649 76 PPIPDLAPPMIKFIDFARSK-----GVRRFVLLSASIIEK---------------G------GP------AMGQVHAHLD 123 (285)
T ss_pred CCCCChhHHHHHHHHHHHHc-----CCCEEEEeeccccCC---------------C------Cc------hHHHHHHHHH
Confidence 0124567899999987 689999998743210 0 00 0112244443
Q ss_pred hhCCCceEEEeccCceEeC
Q 030483 144 SYSPAITYSVHRSSVIIGA 162 (176)
Q Consensus 144 ~~~~g~~~~ivRp~~v~G~ 162 (176)
+ ..+++|+++||++++..
T Consensus 124 ~-~~gi~~tilRp~~f~~~ 141 (285)
T TIGR03649 124 S-LGGVEYTVLRPTWFMEN 141 (285)
T ss_pred h-ccCCCEEEEeccHHhhh
Confidence 2 24899999999988854
No 70
>PRK06482 short chain dehydrogenase; Provisional
Probab=99.33 E-value=1e-11 Score=98.90 Aligned_cols=86 Identities=16% Similarity=0.084 Sum_probs=59.4
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-------CCC---------------------------
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------WFP--------------------------- 54 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~~~--------------------------- 54 (176)
.|++|||||+||||++|+++|+ ++|++|++++|+.... ...
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~-----~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 76 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLL-----ARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGR 76 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4789999999999999999999 7899999998864210 000
Q ss_pred CCcc------------c----CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccce
Q 030483 55 TALV------------Q----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 100 (176)
Q Consensus 55 ~~~v------------~----~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~ 100 (176)
.+.+ . ++....+++|+.++.++++++...+. ..+.++|+++||..
T Consensus 77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~-~~~~~~iv~~sS~~ 137 (276)
T PRK06482 77 IDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLR-RQGGGRIVQVSSEG 137 (276)
T ss_pred CCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCCEEEEEcCcc
Confidence 0101 0 11245678999999999999743210 11357899998753
No 71
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.30 E-value=1e-11 Score=97.72 Aligned_cols=37 Identities=19% Similarity=0.048 Sum_probs=33.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
++++++|||||+|+||++++++|+ +.|++|++++|++
T Consensus 5 ~~~~~vlItGasg~iG~~la~~l~-----~~G~~v~~~~r~~ 41 (262)
T PRK13394 5 LNGKTAVVTGAASGIGKEIALELA-----RAGAAVAIADLNQ 41 (262)
T ss_pred CCCCEEEEECCCChHHHHHHHHHH-----HCCCeEEEEeCCh
Confidence 446899999999999999999999 7999999998876
No 72
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.29 E-value=3.2e-11 Score=93.71 Aligned_cols=133 Identities=16% Similarity=0.064 Sum_probs=81.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-----------CCC---------------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----------WFP--------------------- 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~~--------------------- 54 (176)
++.+++|||||+|+||++|+++|+ ++|++|+.+.|+.... ...
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~-----~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 78 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLA-----RAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAA 78 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-----HCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHH
Confidence 445799999999999999999999 7999998877654310 000
Q ss_pred ------CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCcc
Q 030483 55 ------TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 112 (176)
Q Consensus 55 ------~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~ 112 (176)
.+.+ .+.+.+.+++|+.++.++++++..... ..+.++++++||...+.+.
T Consensus 79 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~~i~~SS~~~~~~~------- 150 (249)
T PRK12825 79 VERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMR-KQRGGRIVNISSVAGLPGW------- 150 (249)
T ss_pred HHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCCEEEEECccccCCCC-------
Confidence 0000 001245678899999888888753210 1146789999986554210
Q ss_pred CCCCCCCccccCCCCCCCCCcchHHHHHHHH----h-hCCCceEEEeccCceEeCCCC
Q 030483 113 GQLMPYEVPFKEDSSRLPFPNFYYELEDVSA----S-YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 113 g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~----~-~~~g~~~~ivRp~~v~G~~~~ 165 (176)
+ ....+.......+.+.. + ...+++++++||+.++|+...
T Consensus 151 --------~-----~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~ 195 (249)
T PRK12825 151 --------P-----GRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKE 195 (249)
T ss_pred --------C-----CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccc
Confidence 0 00001111111222221 1 246899999999999998753
No 73
>PRK12827 short chain dehydrogenase; Provisional
Probab=99.29 E-value=2e-11 Score=95.21 Aligned_cols=132 Identities=16% Similarity=0.057 Sum_probs=81.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------------------------CCC--------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------------------------WFP-------- 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------------------------~~~-------- 54 (176)
++++++|||||+|+||++|+++|+ ++|++|++++|...+. ...
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~-----~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 78 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLA-----ADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAAL 78 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHH-----HCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence 456899999999999999999999 7999999877632110 000
Q ss_pred ---------CCcc----------------cCcHHHHHHHHHHHHHHHHHHHH-hcCCCCCCccEEEEeccceeecccccC
Q 030483 55 ---------TALV----------------QESEEVNIFKNSTMLKNVLSVLV-SSNSGRSRLRHVALLTGTKHYMGPIFD 108 (176)
Q Consensus 55 ---------~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~-~~~~~~~~v~~vv~~Ss~~~yg~~~~d 108 (176)
.+.+ .+++.+.+++|..++.++++++. ..+. ....++++++||...+.+.
T Consensus 79 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~~iv~~sS~~~~~~~--- 154 (249)
T PRK12827 79 DAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIR-ARRGGRIVNIASVAGVRGN--- 154 (249)
T ss_pred HHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHh-cCCCeEEEEECCchhcCCC---
Confidence 0000 11234567899999999999987 2100 1135689999886554210
Q ss_pred CCccCCCCCCCccccCCCCCCCCCcchHHHHHHHHh-----hCCCceEEEeccCceEeCCC
Q 030483 109 PSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 109 ~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~-----~~~g~~~~ivRp~~v~G~~~ 164 (176)
+ +...+...+...+.+.+. ...+++++++||+++.++..
T Consensus 155 ------------~-----~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~ 198 (249)
T PRK12827 155 ------------R-----GQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMA 198 (249)
T ss_pred ------------C-----CCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcc
Confidence 0 000111111222222221 24589999999999998864
No 74
>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=99.28 E-value=9.7e-12 Score=95.96 Aligned_cols=133 Identities=18% Similarity=0.200 Sum_probs=91.4
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcE---EEEEecCCCCCCC------------CCCcc------------cCcH
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWK---VYGAARRPPPGWF------------PTALV------------QESE 62 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~---V~~l~R~~~~~~~------------~~~~v------------~~~~ 62 (176)
++|||||++|.+|++|.+.+. +.|.+ .+.......+... +..++ ...+
T Consensus 2 ~kIlVtGg~GLVGsAi~~vv~-----~q~~~~e~wvf~~skd~DLt~~a~t~~lF~~ekPthVIhlAAmVGGlf~N~~yn 76 (315)
T KOG1431|consen 2 KKILVTGGTGLVGSAIVKVVQ-----EQGFDDENWVFIGSKDADLTNLADTRALFESEKPTHVIHLAAMVGGLFHNNTYN 76 (315)
T ss_pred ceEEEecCCchHHHHHHHHHH-----hcCCCCcceEEeccccccccchHHHHHHHhccCCceeeehHhhhcchhhcCCCc
Confidence 689999999999999999999 45552 2222222222110 11111 3456
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCC--CCC-cchHHHH
Q 030483 63 EVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRL--PFP-NFYYELE 139 (176)
Q Consensus 63 ~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~--~~~-~~y~~~e 139 (176)
..++++|+..-.|++..|-+. +++++++.-|+++|... ...|++|+.... |.| ++.|.-.
T Consensus 77 ldF~r~Nl~indNVlhsa~e~-----gv~K~vsclStCIfPdk------------t~yPIdEtmvh~gpphpsN~gYsyA 139 (315)
T KOG1431|consen 77 LDFIRKNLQINDNVLHSAHEH-----GVKKVVSCLSTCIFPDK------------TSYPIDETMVHNGPPHPSNFGYSYA 139 (315)
T ss_pred hHHHhhcceechhHHHHHHHh-----chhhhhhhcceeecCCC------------CCCCCCHHHhccCCCCCCchHHHHH
Confidence 778999999999999999998 68888887788888521 246899997433 222 4445433
Q ss_pred H-HHH---h---hCCCceEEEeccCceEeCCC
Q 030483 140 D-VSA---S---YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 140 ~-~~~---~---~~~g~~~~ivRp~~v~G~~~ 164 (176)
| ++. . .++|++++.+-|.++|||..
T Consensus 140 Kr~idv~n~aY~~qhg~~~tsviPtNvfGphD 171 (315)
T KOG1431|consen 140 KRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHD 171 (315)
T ss_pred HHHHHHHHHHHHHHhCCceeeeccccccCCCC
Confidence 3 221 1 47899999999999999996
No 75
>PRK06180 short chain dehydrogenase; Provisional
Probab=99.28 E-value=3.6e-11 Score=96.09 Aligned_cols=130 Identities=15% Similarity=0.095 Sum_probs=80.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-------CCC--------------------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------WFP-------------------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~~~-------------------------- 54 (176)
+++++|||||+|+||++|+++|+ +.|++|++++|++... ...
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~-----~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~ 77 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAAL-----AAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFG 77 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHH-----hCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Confidence 45789999999999999999999 6899999999864310 000
Q ss_pred -CCcc------------c----CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCC
Q 030483 55 -TALV------------Q----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMP 117 (176)
Q Consensus 55 -~~~v------------~----~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~ 117 (176)
.+.+ . ++..+.+++|+.++.++++++...+. ..+..+|+++||...+.+
T Consensus 78 ~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~-~~~~~~iv~iSS~~~~~~------------- 143 (277)
T PRK06180 78 PIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMR-ARRRGHIVNITSMGGLIT------------- 143 (277)
T ss_pred CCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHh-ccCCCEEEEEecccccCC-------------
Confidence 0000 0 11245689999999999998654311 113468999988654321
Q ss_pred CCccccCCCCCCCCCcchHHHHHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 118 YEVPFKEDSSRLPFPNFYYELEDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 118 ~~~p~~E~~~~~~~~~~y~~~e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
.| +..++...+...+.+.+ + ...|++++++||+.+.++.
T Consensus 144 --~~-----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~ 187 (277)
T PRK06180 144 --MP-----GIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDW 187 (277)
T ss_pred --CC-----CcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCc
Confidence 00 00001111122222222 1 3468999999999997764
No 76
>PRK06179 short chain dehydrogenase; Provisional
Probab=99.26 E-value=1e-10 Score=92.77 Aligned_cols=126 Identities=15% Similarity=0.192 Sum_probs=81.1
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC--CC---------------------------Ccc-
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF--PT---------------------------ALV- 58 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~--~~---------------------------~~v- 58 (176)
+++++||||+|+||++++++|+ ++|++|++++|+...... .. +.+
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li 78 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLA-----RAGYRVFGTSRNPARAAPIPGVELLELDVTDDASVQAAVDEVIARAGRIDVLV 78 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHH-----HCCCEEEEEeCChhhccccCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEE
Confidence 4689999999999999999999 789999999997432110 00 000
Q ss_pred ---------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCcccc
Q 030483 59 ---------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFK 123 (176)
Q Consensus 59 ---------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~ 123 (176)
.++....+++|+.++.++++++...+. ..+.++|+++||...+. ..|
T Consensus 79 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~~~~~iv~isS~~~~~---------------~~~-- 140 (270)
T PRK06179 79 NNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMR-AQGSGRIINISSVLGFL---------------PAP-- 140 (270)
T ss_pred ECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCceEEEECCccccC---------------CCC--
Confidence 012345788999998888887644211 11467899998854432 011
Q ss_pred CCCCCCCCCcchHH----HHHHHH----h-hCCCceEEEeccCceEeCCC
Q 030483 124 EDSSRLPFPNFYYE----LEDVSA----S-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 124 E~~~~~~~~~~y~~----~e~~~~----~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
....|.. .+.+.+ + ...|++++++||+.+.++..
T Consensus 141 -------~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~ 183 (270)
T PRK06179 141 -------YMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFD 183 (270)
T ss_pred -------CccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccc
Confidence 0112322 222222 2 35799999999999988754
No 77
>PRK09135 pteridine reductase; Provisional
Probab=99.26 E-value=4.8e-11 Score=93.04 Aligned_cols=36 Identities=28% Similarity=0.330 Sum_probs=32.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.+++|||||+||||++++++|+ +.|++|++++|+.
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~-----~~g~~v~~~~r~~ 40 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLH-----AAGYRVAIHYHRS 40 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEcCCC
Confidence 45789999999999999999999 7899999999863
No 78
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=99.25 E-value=1.5e-11 Score=96.06 Aligned_cols=133 Identities=14% Similarity=-0.023 Sum_probs=82.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC--------------------CCC------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------------------WFP------------ 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------------------~~~------------ 54 (176)
++++++|||||+|+||++|+++|+ ++||+|++++|+.... ...
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~-----~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 78 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLA-----ADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGV 78 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 456899999999999999999999 7899999999973210 000
Q ss_pred -----CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccC
Q 030483 55 -----TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 113 (176)
Q Consensus 55 -----~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g 113 (176)
.+.+ .+++.+.+++|+.++.++++++...+. ..+.++|+++||...++.
T Consensus 79 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~ii~~ss~~~~~~--------- 148 (251)
T PRK12826 79 EDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALI-RAGGGRIVLTSSVAGPRV--------- 148 (251)
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-HcCCcEEEEEechHhhcc---------
Confidence 0000 012245678999999888888753210 113568898888644310
Q ss_pred CCCCCCccccCCCCCCCCCcchHHHHHHHHh-----hCCCceEEEeccCceEeCCC
Q 030483 114 QLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 114 ~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~-----~~~g~~~~ivRp~~v~G~~~ 164 (176)
+... .. ++...+...+.++.. ...+++++++||++++||..
T Consensus 149 -------~~~~-~~--~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~ 194 (251)
T PRK12826 149 -------GYPG-LA--HYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMA 194 (251)
T ss_pred -------CCCC-cc--HHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchh
Confidence 1000 00 011111112222222 24589999999999999865
No 79
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.24 E-value=2.1e-11 Score=95.63 Aligned_cols=37 Identities=32% Similarity=0.229 Sum_probs=33.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.++++|||||+|+||++++++|+ ++|++|++++|++.
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~-----~~g~~v~~~~r~~~ 39 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALA-----KEGAKVVIADLNDE 39 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HCCCeEEEEeCCHH
Confidence 35799999999999999999999 78999999998754
No 80
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.24 E-value=7e-11 Score=92.79 Aligned_cols=132 Identities=14% Similarity=0.049 Sum_probs=81.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------C-CC---------C------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------W-FP---------T------------ 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~-~~---------~------------ 55 (176)
|+|++|||||+|+||++|+++|+ ++|++|++++|+..+. . .. +
T Consensus 1 ~~k~vlItG~sg~iG~~la~~L~-----~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 75 (256)
T PRK12745 1 MRPVALVTGGRRGIGLGIARALA-----AAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQ 75 (256)
T ss_pred CCcEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence 45789999999999999999999 7899999999864320 0 00 0
Q ss_pred ------Ccc------------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCC-----CccEEEEeccceeecccc
Q 030483 56 ------ALV------------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRS-----RLRHVALLTGTKHYMGPI 106 (176)
Q Consensus 56 ------~~v------------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~-----~v~~vv~~Ss~~~yg~~~ 106 (176)
+.+ .+.+++.+++|+.++.++++++...+.... .+.+++++||...+.+
T Consensus 76 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-- 153 (256)
T PRK12745 76 AAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMV-- 153 (256)
T ss_pred HhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccC--
Confidence 000 012244688999999999888765421011 1567899988654321
Q ss_pred cCCCccCCCCCCCccccCCCCCCCCCcchHHHHHHHHh-----hCCCceEEEeccCceEeCCC
Q 030483 107 FDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 107 ~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~-----~~~g~~~~ivRp~~v~G~~~ 164 (176)
..+.. .+...+...+.+.+. ..++++++++||+.+.++..
T Consensus 154 ---------------~~~~~---~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~ 198 (256)
T PRK12745 154 ---------------SPNRG---EYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMT 198 (256)
T ss_pred ---------------CCCCc---ccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccc
Confidence 00001 111112222322222 24689999999999998754
No 81
>PRK06196 oxidoreductase; Provisional
Probab=99.23 E-value=7.5e-11 Score=96.07 Aligned_cols=37 Identities=30% Similarity=0.296 Sum_probs=33.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.++++|||||+|+||.+++++|+ ..|++|++++|+..
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~-----~~G~~Vv~~~R~~~ 61 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALA-----QAGAHVIVPARRPD 61 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCHH
Confidence 46899999999999999999999 79999999998743
No 82
>PRK08263 short chain dehydrogenase; Provisional
Probab=99.21 E-value=9.3e-11 Score=93.53 Aligned_cols=90 Identities=17% Similarity=0.035 Sum_probs=61.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-------CCC-------------------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------WFP------------------------- 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~~~------------------------- 54 (176)
|+++++|||||+|+||++++++|+ ++|++|++++|+.... ...
T Consensus 1 ~~~k~vlItGasg~iG~~~a~~l~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (275)
T PRK08263 1 MMEKVWFITGASRGFGRAWTEAAL-----ERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHF 75 (275)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHc
Confidence 456799999999999999999999 6899999999874210 000
Q ss_pred --CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceee
Q 030483 55 --TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 102 (176)
Q Consensus 55 --~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~y 102 (176)
.+.+ .+++++.+++|+.++.++++++...+. ..+.++++++||...+
T Consensus 76 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~vsS~~~~ 140 (275)
T PRK08263 76 GRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLR-EQRSGHIIQISSIGGI 140 (275)
T ss_pred CCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCCEEEEEcChhhc
Confidence 0000 123456788999998777777643210 0135689999886554
No 83
>PRK06523 short chain dehydrogenase; Provisional
Probab=99.21 E-value=1.8e-10 Score=90.87 Aligned_cols=138 Identities=15% Similarity=0.074 Sum_probs=83.3
Q ss_pred CCcCCCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCCC--------------------------
Q 030483 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFP-------------------------- 54 (176)
Q Consensus 1 ~~~~~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~-------------------------- 54 (176)
|+....+.++++|||||+|+||++++++|. +.|++|++++|+.......
T Consensus 1 ~~~~~~~~~k~vlItGas~gIG~~ia~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (260)
T PRK06523 1 MSFFLELAGKRALVTGGTKGIGAATVARLL-----EAGARVVTTARSRPDDLPEGVEFVAADLTTAEGCAAVARAVLERL 75 (260)
T ss_pred CCcCcCCCCCEEEEECCCCchhHHHHHHHH-----HCCCEEEEEeCChhhhcCCceeEEecCCCCHHHHHHHHHHHHHHc
Confidence 444444567899999999999999999999 7899999999875321100
Q ss_pred --CCcc------------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCC
Q 030483 55 --TALV------------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQ 114 (176)
Q Consensus 55 --~~~v------------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~ 114 (176)
.+.+ .++++..+++|+.++.++.+++...+. ..+..+|+++||...+.
T Consensus 76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~g~ii~isS~~~~~----------- 143 (260)
T PRK06523 76 GGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMI-ARGSGVIIHVTSIQRRL----------- 143 (260)
T ss_pred CCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHH-hcCCcEEEEEecccccC-----------
Confidence 0001 012345678999988777666544311 01235788888864432
Q ss_pred CCCCCccccCCCCCCCCCcchHHHHHHHHh-----hCCCceEEEeccCceEeCC
Q 030483 115 LMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 115 ~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~-----~~~g~~~~ivRp~~v~G~~ 163 (176)
+..+.. .++...+...+.+.+. ...++++.+++|+.|..+.
T Consensus 144 ------~~~~~~--~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~ 189 (260)
T PRK06523 144 ------PLPEST--TAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEA 189 (260)
T ss_pred ------CCCCCc--chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCcc
Confidence 111110 0111111222222222 3468999999999998875
No 84
>PRK12828 short chain dehydrogenase; Provisional
Probab=99.21 E-value=3e-11 Score=93.55 Aligned_cols=131 Identities=14% Similarity=0.014 Sum_probs=82.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------C--CC-------------------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------W--FP------------------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~--~~------------------------- 54 (176)
.++++|||||+|+||++++++|+ ++|++|++++|++.+. . ..
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLA-----ARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQF 80 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHH-----HCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHh
Confidence 46899999999999999999999 6899999999965320 0 00
Q ss_pred --CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCC
Q 030483 55 --TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLM 116 (176)
Q Consensus 55 --~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~ 116 (176)
.+.+ .++..+.+.+|..++.++++++...+. ..++++|+++||...|+..
T Consensus 81 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~~sS~~~~~~~----------- 148 (239)
T PRK12828 81 GRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALT-ASGGGRIVNIGAGAALKAG----------- 148 (239)
T ss_pred CCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHH-hcCCCEEEEECchHhccCC-----------
Confidence 0000 001234577899999888888764311 1146789999987655310
Q ss_pred CCCccccCCCCCCCCCcchHHHHHHHHh-----hCCCceEEEeccCceEeCCC
Q 030483 117 PYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 117 ~~~~p~~E~~~~~~~~~~y~~~e~~~~~-----~~~g~~~~ivRp~~v~G~~~ 164 (176)
+ .. ..+.......+.+++. ...++++.++||+.++++..
T Consensus 149 ----~---~~--~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~ 192 (239)
T PRK12828 149 ----P---GM--GAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPN 192 (239)
T ss_pred ----C---Cc--chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcch
Confidence 0 00 0011111112222221 34689999999999998743
No 85
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.21 E-value=5.7e-11 Score=92.28 Aligned_cols=133 Identities=16% Similarity=0.093 Sum_probs=82.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------------C--CC--C------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------------W--FP--T------------ 55 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------------~--~~--~------------ 55 (176)
|+++++|||||+|+||.+|+++|+ ++|++|++++|++... + .+ +
T Consensus 3 ~~~~~ilItGasg~iG~~l~~~l~-----~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (246)
T PRK05653 3 LQGKTALVTGASRGIGRAIALRLA-----ADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAV 77 (246)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHH
Confidence 556899999999999999999999 6899999999975420 0 00 0
Q ss_pred ------Ccc--------c--------CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccC
Q 030483 56 ------ALV--------Q--------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 113 (176)
Q Consensus 56 ------~~v--------~--------~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g 113 (176)
+.+ . +...+.++.|+.+..++++++..... ..++++|+++||...+. +
T Consensus 78 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~-~~~~~~ii~~ss~~~~~---------~ 147 (246)
T PRK05653 78 EAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMI-KARYGRIVNISSVSGVT---------G 147 (246)
T ss_pred HHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCcEEEEECcHHhcc---------C
Confidence 000 0 01244678999999988888864210 11457899988753221 0
Q ss_pred CCCCCCccccCCCCCCCCCcchHHHHHHHH----h-hCCCceEEEeccCceEeCCCC
Q 030483 114 QLMPYEVPFKEDSSRLPFPNFYYELEDVSA----S-YSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 114 ~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~----~-~~~g~~~~ivRp~~v~G~~~~ 165 (176)
. .+..++...+...+.+.+ + ...+++++++||+.++|+...
T Consensus 148 -----~------~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~ 193 (246)
T PRK05653 148 -----N------PGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTE 193 (246)
T ss_pred -----C------CCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchh
Confidence 0 000001111122222222 1 345899999999999998753
No 86
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=99.20 E-value=2.3e-11 Score=95.32 Aligned_cols=34 Identities=26% Similarity=0.221 Sum_probs=31.7
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+++|||||+|+||++|+++|+ ++|++|++++|+.
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~-----~~g~~v~~~~r~~ 35 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALA-----AAGANVVVNDLGE 35 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 689999999999999999999 7899999999975
No 87
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=99.20 E-value=8.1e-11 Score=96.09 Aligned_cols=92 Identities=17% Similarity=0.135 Sum_probs=62.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------CC-C----------------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------WF-P---------------------- 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~~-~---------------------- 54 (176)
+.++++|||||+|+||.+++++|+ ..|++|++++|+.... .. .
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~L~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 78 (322)
T PRK07453 4 DAKGTVIITGASSGVGLYAAKALA-----KRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFR 78 (322)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHH
Confidence 356899999999999999999999 6899999998863210 00 0
Q ss_pred -----CCcc------c-----------CcHHHHHHHHHHHHHHHHHHHHhcCCC-CCCccEEEEeccceeec
Q 030483 55 -----TALV------Q-----------ESEEVNIFKNSTMLKNVLSVLVSSNSG-RSRLRHVALLTGTKHYM 103 (176)
Q Consensus 55 -----~~~v------~-----------~~~~~~~~~N~~~t~~ll~a~~~~~~~-~~~v~~vv~~Ss~~~yg 103 (176)
.+.+ . +.++..+++|+.++.++++++...+.. .....+||++||..++.
T Consensus 79 ~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~ 150 (322)
T PRK07453 79 ALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANP 150 (322)
T ss_pred HhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCc
Confidence 0000 0 012456889999988888777654210 11135899999987754
No 88
>PRK06914 short chain dehydrogenase; Provisional
Probab=99.19 E-value=2.8e-10 Score=90.72 Aligned_cols=37 Identities=24% Similarity=0.326 Sum_probs=33.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|+++++|||||+|+||++|+++|+ ++|++|++++|++
T Consensus 1 ~~~k~~lItGasg~iG~~la~~l~-----~~G~~V~~~~r~~ 37 (280)
T PRK06914 1 MNKKIAIVTGASSGFGLLTTLELA-----KKGYLVIATMRNP 37 (280)
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-----hCCCEEEEEeCCH
Confidence 456789999999999999999999 7899999999864
No 89
>PRK07806 short chain dehydrogenase; Provisional
Probab=99.17 E-value=1.4e-10 Score=90.72 Aligned_cols=85 Identities=19% Similarity=0.143 Sum_probs=60.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-----------CCC------C--------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----------WFP------T-------------- 55 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~~------~-------------- 55 (176)
++++++|||||+||||++++++|+ ..|++|++++|+.... ... +
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~-----~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~ 78 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILA-----GAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTA 78 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHH-----HCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence 446799999999999999999999 6899999998864210 000 0
Q ss_pred -------Ccc----------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccc
Q 030483 56 -------ALV----------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 99 (176)
Q Consensus 56 -------~~v----------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~ 99 (176)
+.+ ..++...+++|+.++.++++++...+ .+-.+++++||.
T Consensus 79 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~---~~~~~iv~isS~ 136 (248)
T PRK07806 79 REEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLM---PAGSRVVFVTSH 136 (248)
T ss_pred HHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhc---cCCceEEEEeCc
Confidence 001 11234567789999999999998762 122478888874
No 90
>PRK05993 short chain dehydrogenase; Provisional
Probab=99.16 E-value=1.9e-10 Score=91.92 Aligned_cols=37 Identities=30% Similarity=0.486 Sum_probs=33.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
|++++|||||+|+||++++++|. +.|++|++++|+..
T Consensus 3 ~~k~vlItGasggiG~~la~~l~-----~~G~~Vi~~~r~~~ 39 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQ-----SDGWRVFATCRKEE 39 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEECCHH
Confidence 45789999999999999999999 78999999999753
No 91
>PRK07577 short chain dehydrogenase; Provisional
Probab=99.16 E-value=3.1e-10 Score=87.96 Aligned_cols=129 Identities=13% Similarity=0.047 Sum_probs=79.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCCC-------------------------CCcc----
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFP-------------------------TALV---- 58 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~-------------------------~~~v---- 58 (176)
..|++|||||+|+||++++++|+ ++|++|++++|+....... .+.+
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a 76 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLA-----NLGHQVIGIARSAIDDFPGELFACDLADIEQTAATLAQINEIHPVDAIVNNV 76 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHH-----HCCCEEEEEeCCcccccCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECC
Confidence 45789999999999999999999 7999999999975432100 0001
Q ss_pred ------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCC
Q 030483 59 ------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDS 126 (176)
Q Consensus 59 ------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~ 126 (176)
.++....+++|+.++.++.+++...+. ..+..+|+++||...|+.+. ..
T Consensus 77 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~~sS~~~~~~~~------------~~------ 137 (234)
T PRK07577 77 GIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMK-LREQGRIVNICSRAIFGALD------------RT------ 137 (234)
T ss_pred CCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-HcCCcEEEEEccccccCCCC------------ch------
Confidence 012234678888887777666544210 11356899998876554210 00
Q ss_pred CCCCCCcchHHHHHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 127 SRLPFPNFYYELEDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 127 ~~~~~~~~y~~~e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
++.......+.+.+ + ...+++++++||+.+..+.
T Consensus 138 ---~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~ 176 (234)
T PRK07577 138 ---SYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETEL 176 (234)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcc
Confidence 01111111222222 2 3568999999999998764
No 92
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=99.15 E-value=8.8e-11 Score=91.82 Aligned_cols=131 Identities=13% Similarity=-0.001 Sum_probs=81.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-------------C---C----C-------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------------W---F----P------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------------~---~----~------------- 54 (176)
.++++|||||+|+||++++++|+ ++|++|+.++|+.... . . .
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~-----~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 76 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFA-----EEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQ 76 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999 7999999998864210 0 0 0
Q ss_pred ----CCcc-------------cCc---HHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCC
Q 030483 55 ----TALV-------------QES---EEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQ 114 (176)
Q Consensus 55 ----~~~v-------------~~~---~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~ 114 (176)
.+.+ ..+ .++.+++|+.++.++++++...+. ..+..+++++||...|++.
T Consensus 77 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~ii~iss~~~~~~~--------- 146 (250)
T TIGR03206 77 ALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMV-ERGAGRIVNIASDAARVGS--------- 146 (250)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCeEEEEECchhhccCC---------
Confidence 0001 011 234688999999988888764311 1135789999887665321
Q ss_pred CCCCCccccCCCCCCCCCcchHHHHHHHH----h-hCCCceEEEeccCceEeCCC
Q 030483 115 LMPYEVPFKEDSSRLPFPNFYYELEDVSA----S-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 115 ~~~~~~p~~E~~~~~~~~~~y~~~e~~~~----~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
+ ... .+.....+.+.+.+ + ...+++++++||+.++++..
T Consensus 147 ------~---~~~--~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~ 190 (250)
T TIGR03206 147 ------S---GEA--VYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALL 190 (250)
T ss_pred ------C---CCc--hHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhH
Confidence 0 000 01111111122222 1 23589999999999998843
No 93
>PRK07890 short chain dehydrogenase; Provisional
Probab=99.15 E-value=1.9e-10 Score=90.45 Aligned_cols=130 Identities=14% Similarity=-0.039 Sum_probs=82.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-------------C--C--C----------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------------W--F--P---------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------------~--~--~---------------- 54 (176)
.+|++|||||+|+||++|+++|+ ++||+|++++|+.... . . +
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAA-----RAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALE 78 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999 7999999999865310 0 0 0
Q ss_pred ----CCcc-----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccC
Q 030483 55 ----TALV-----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 113 (176)
Q Consensus 55 ----~~~v-----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g 113 (176)
.+.+ .+.+...+++|+.++..+++++...+. ....+|+++||...+.
T Consensus 79 ~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~~~ii~~sS~~~~~---------- 146 (258)
T PRK07890 79 RFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALA--ESGGSIVMINSMVLRH---------- 146 (258)
T ss_pred HcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHH--hCCCEEEEEechhhcc----------
Confidence 0000 012245688999999999999876421 1124789888754321
Q ss_pred CCCCCCccccCCCCCCCCCcchHHHHHHHHh-----hCCCceEEEeccCceEeCCC
Q 030483 114 QLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 114 ~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~-----~~~g~~~~ivRp~~v~G~~~ 164 (176)
|.. ....+.......+.+.+. ...++++.++||+.++++..
T Consensus 147 -------~~~---~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~ 192 (258)
T PRK07890 147 -------SQP---KYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPL 192 (258)
T ss_pred -------CCC---CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHH
Confidence 100 000111122222333322 34689999999999999864
No 94
>PRK06182 short chain dehydrogenase; Validated
Probab=99.15 E-value=3.7e-10 Score=89.89 Aligned_cols=36 Identities=42% Similarity=0.568 Sum_probs=32.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+++++||||+|+||++++++|+ +.|++|++++|+.
T Consensus 2 ~~k~vlItGasggiG~~la~~l~-----~~G~~V~~~~r~~ 37 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLA-----AQGYTVYGAARRV 37 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 35799999999999999999999 6899999999874
No 95
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=99.15 E-value=3.3e-10 Score=89.37 Aligned_cols=37 Identities=16% Similarity=0.074 Sum_probs=33.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.+|++|||||+|+||++++++|+ +.|++|+.++|+.
T Consensus 6 ~~~k~vlVtGas~gIG~~la~~l~-----~~G~~v~~~~r~~ 42 (260)
T PRK12823 6 FAGKVVVVTGAAQGIGRGVALRAA-----AEGARVVLVDRSE 42 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCch
Confidence 456899999999999999999999 7999999999863
No 96
>PRK09186 flagellin modification protein A; Provisional
Probab=99.14 E-value=5.9e-10 Score=87.53 Aligned_cols=36 Identities=25% Similarity=0.250 Sum_probs=32.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+|++|||||+|+||++++++|+ +.|++|+.++|++
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~-----~~g~~v~~~~r~~ 38 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAIL-----EAGGIVIAADIDK 38 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEecCh
Confidence 46899999999999999999999 7999999998864
No 97
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=99.13 E-value=6.4e-10 Score=87.14 Aligned_cols=132 Identities=11% Similarity=0.019 Sum_probs=82.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC--------C--------------------CCcc
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF--------P--------------------TALV 58 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~--------~--------------------~~~v 58 (176)
+.+|++|||||+|+||++++++|+ +.|++|++++|+...... + .+.+
T Consensus 6 ~~~k~vlItGas~~iG~~la~~l~-----~~G~~v~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (252)
T PRK08220 6 FSGKTVWVTGAAQGIGYAVALAFV-----EAGAKVIGFDQAFLTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL 80 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEecchhhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 456899999999999999999999 799999999987611000 0 0011
Q ss_pred ----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccc
Q 030483 59 ----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPF 122 (176)
Q Consensus 59 ----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~ 122 (176)
.+++...+++|+.++.++++++...+. ..+..+|+++||..... |.
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~g~iv~~ss~~~~~-----------------~~ 142 (252)
T PRK08220 81 VNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFR-RQRSGAIVTVGSNAAHV-----------------PR 142 (252)
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hCCCCEEEEECCchhcc-----------------CC
Confidence 112345688999999898888765311 11235788888753321 11
Q ss_pred cCCCCCCCCCcchHHHHHHHHh-----hCCCceEEEeccCceEeCCC
Q 030483 123 KEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 123 ~E~~~~~~~~~~y~~~e~~~~~-----~~~g~~~~ivRp~~v~G~~~ 164 (176)
.... .+...+...+.+.+. ...++++.+++|+.++++..
T Consensus 143 ~~~~---~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~ 186 (252)
T PRK08220 143 IGMA---AYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQ 186 (252)
T ss_pred CCCc---hhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhh
Confidence 0000 011112222322222 34689999999999999853
No 98
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.12 E-value=2.2e-10 Score=89.25 Aligned_cols=131 Identities=15% Similarity=0.016 Sum_probs=80.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------------C-C-C---------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------------W-F-P--------------- 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------------~-~-~--------------- 54 (176)
+.++++|||||+|+||.+|+++|+ +.|++|++++|++.+. + . +
T Consensus 5 ~~~~~vlVtG~sg~iG~~l~~~L~-----~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 79 (239)
T PRK07666 5 LQGKNALITGAGRGIGRAVAIALA-----KEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLK 79 (239)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 445789999999999999999999 7999999999875310 0 0 0
Q ss_pred -----CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccC
Q 030483 55 -----TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 113 (176)
Q Consensus 55 -----~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g 113 (176)
.+.+ .++..+.+++|+.++.++++++...+. ..+.++++++||...+.+.
T Consensus 80 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~~ss~~~~~~~-------- 150 (239)
T PRK07666 80 NELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMI-ERQSGDIINISSTAGQKGA-------- 150 (239)
T ss_pred HHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hCCCcEEEEEcchhhccCC--------
Confidence 0000 011245688999998888888765311 1134678888875443210
Q ss_pred CCCCCCccccCCCCCCCCCcchHHHHHH----HHh-hCCCceEEEeccCceEeCC
Q 030483 114 QLMPYEVPFKEDSSRLPFPNFYYELEDV----SAS-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 114 ~~~~~~~p~~E~~~~~~~~~~y~~~e~~----~~~-~~~g~~~~ivRp~~v~G~~ 163 (176)
+ ....+.......+.+ ..+ ...+++++++||+.+..+.
T Consensus 151 -------~-----~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~ 193 (239)
T PRK07666 151 -------A-----VTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDM 193 (239)
T ss_pred -------C-----CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcc
Confidence 0 000001111111111 122 3568999999999998774
No 99
>PRK06500 short chain dehydrogenase; Provisional
Probab=99.12 E-value=1.5e-10 Score=90.50 Aligned_cols=128 Identities=16% Similarity=0.077 Sum_probs=79.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC----------C--CC--C------------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP----------G--WF--P------------------ 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~----------~--~~--~------------------ 54 (176)
++++++|||||+|+||++++++|+ +.|++|++++|+... . +. .
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~-----~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFL-----AEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAF 78 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 456899999999999999999999 799999999886321 0 00 0
Q ss_pred --CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccc-eeecccccCCCccCCC
Q 030483 55 --TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT-KHYMGPIFDPSLAGQL 115 (176)
Q Consensus 55 --~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~-~~yg~~~~d~~~~g~~ 115 (176)
.+.+ .+++.+.+++|+.++.++++++...+. ...+++++||. ..|+.
T Consensus 79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~~i~~~S~~~~~~~----------- 144 (249)
T PRK06500 79 GRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLA---NPASIVLNGSINAHIGM----------- 144 (249)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHh---cCCEEEEEechHhccCC-----------
Confidence 0001 112345789999999999999986421 12356666553 33321
Q ss_pred CCCCccccCCCCCCCCCcchHHHHHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 116 MPYEVPFKEDSSRLPFPNFYYELEDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 116 ~~~~~p~~E~~~~~~~~~~y~~~e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
| +.. ++...+...+.+.+ + ...++++.++||+.+++|.
T Consensus 145 -----~--~~~---~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~ 187 (249)
T PRK06500 145 -----P--NSS---VYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPL 187 (249)
T ss_pred -----C--Ccc---HHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHH
Confidence 0 000 01111222333332 2 3468999999999999873
No 100
>PRK08264 short chain dehydrogenase; Validated
Probab=99.10 E-value=6.4e-10 Score=86.51 Aligned_cols=130 Identities=12% Similarity=0.042 Sum_probs=80.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCCCCCC---CC-----------------------CCcc--
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGW---FP-----------------------TALV-- 58 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~~---~~-----------------------~~~v-- 58 (176)
..+++|||||+|+||++++++|+ +.|+ .|++++|+..+.. .. .+.+
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~-----~~G~~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~ 79 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLL-----ARGAAKVYAAARDPESVTDLGPRVVPLQLDVTDPASVAAAAEAASDVTILVN 79 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HCCcccEEEEecChhhhhhcCCceEEEEecCCCHHHHHHHHHhcCCCCEEEE
Confidence 45789999999999999999999 6899 8999998754211 00 0001
Q ss_pred ---------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCcccc
Q 030483 59 ---------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFK 123 (176)
Q Consensus 59 ---------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~ 123 (176)
.+++.+.+++|+.++.++++++..... ..+..+++++||...|.+. +
T Consensus 80 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~~v~~sS~~~~~~~---------------~-- 141 (238)
T PRK08264 80 NAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLA-ANGGGAIVNVLSVLSWVNF---------------P-- 141 (238)
T ss_pred CCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCCEEEEEcChhhccCC---------------C--
Confidence 012234678999999999888764310 1134678888876544210 0
Q ss_pred CCCCCCCCCcchHHHHHHHHh-----hCCCceEEEeccCceEeCC
Q 030483 124 EDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 124 E~~~~~~~~~~y~~~e~~~~~-----~~~g~~~~ivRp~~v~G~~ 163 (176)
...++...+...+.+... ...+++++++||+.+.++.
T Consensus 142 ---~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~ 183 (238)
T PRK08264 142 ---NLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDM 183 (238)
T ss_pred ---CchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccc
Confidence 000011111222322222 3458999999999997764
No 101
>PRK12829 short chain dehydrogenase; Provisional
Probab=99.10 E-value=6.8e-10 Score=87.45 Aligned_cols=38 Identities=18% Similarity=0.064 Sum_probs=34.2
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 6 ~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.++.+++|||||+|+||++++++|+ ++|++|++++|+.
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~-----~~g~~V~~~~r~~ 45 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFA-----EAGARVHVCDVSE 45 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 3457899999999999999999999 7999999999864
No 102
>PRK07060 short chain dehydrogenase; Provisional
Probab=99.10 E-value=2.1e-10 Score=89.42 Aligned_cols=133 Identities=14% Similarity=0.051 Sum_probs=83.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------C-----CC-------------CCcc
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------W-----FP-------------TALV 58 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~-----~~-------------~~~v 58 (176)
+.+++++||||+|+||+++++.|+ +.||+|++++|+.... . .. .+.+
T Consensus 7 ~~~~~~lItGa~g~iG~~~a~~l~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~v 81 (245)
T PRK07060 7 FSGKSVLVTGASSGIGRACAVALA-----QRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGL 81 (245)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEE
Confidence 456899999999999999999999 6899999999875210 0 00 0111
Q ss_pred ----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccc
Q 030483 59 ----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPF 122 (176)
Q Consensus 59 ----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~ 122 (176)
.++.++.+++|+.++.++++++.+.+.......+|+++||...|... +
T Consensus 82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------~- 145 (245)
T PRK07060 82 VNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGL---------------P- 145 (245)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCC---------------C-
Confidence 01234567799999999998887641101112579999886544210 0
Q ss_pred cCCCCCCCCCcchHHHHHHHHh-----hCCCceEEEeccCceEeCCC
Q 030483 123 KEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 123 ~E~~~~~~~~~~y~~~e~~~~~-----~~~g~~~~ivRp~~v~G~~~ 164 (176)
... .+.......+.+.+. ...+++++.+||+.++++..
T Consensus 146 -~~~---~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~ 188 (245)
T PRK07060 146 -DHL---AYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMA 188 (245)
T ss_pred -CCc---HhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchh
Confidence 000 011112222333322 24589999999999998864
No 103
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=99.10 E-value=2e-10 Score=90.41 Aligned_cols=131 Identities=11% Similarity=0.044 Sum_probs=81.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------C---------C-C--------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------W---------F-P-------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~---------~-~-------------- 54 (176)
.+|++|||||+|+||++++++|+ ++|++|+.++|+.... . + .
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLA-----QAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEA 83 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999 7899999999874310 0 0 0
Q ss_pred ----CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCC
Q 030483 55 ----TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQ 114 (176)
Q Consensus 55 ----~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~ 114 (176)
.+.+ .+..++.+.+|+.++.++++++.+.+. ..+.++|+++||...+.
T Consensus 84 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~g~iv~iss~~~~~----------- 151 (255)
T PRK07523 84 EIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMI-ARGAGKIINIASVQSAL----------- 151 (255)
T ss_pred hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-HhCCeEEEEEccchhcc-----------
Confidence 0000 111245678999999999988876421 11346899988753321
Q ss_pred CCCCCccccCCCCCCCCCcchHHHHHHHHh-----hCCCceEEEeccCceEeCCC
Q 030483 115 LMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 115 ~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~-----~~~g~~~~ivRp~~v~G~~~ 164 (176)
+.. ...++...+...+.+.+. ..+|+++.++||+.+.++..
T Consensus 152 ------~~~---~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~ 197 (255)
T PRK07523 152 ------ARP---GIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLN 197 (255)
T ss_pred ------CCC---CCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchh
Confidence 100 000011111122222221 35689999999999998853
No 104
>PRK09291 short chain dehydrogenase; Provisional
Probab=99.10 E-value=7.5e-10 Score=86.97 Aligned_cols=36 Identities=19% Similarity=0.121 Sum_probs=32.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|++++|||||+|+||++++++|+ ..|++|++++|++
T Consensus 1 m~~~vlVtGasg~iG~~ia~~l~-----~~G~~v~~~~r~~ 36 (257)
T PRK09291 1 MSKTILITGAGSGFGREVALRLA-----RKGHNVIAGVQIA 36 (257)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 35789999999999999999999 7999999999864
No 105
>PRK12746 short chain dehydrogenase; Provisional
Probab=99.09 E-value=9.9e-10 Score=86.22 Aligned_cols=130 Identities=12% Similarity=-0.024 Sum_probs=79.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEE-ecCCCCC----------CC----------------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGA-ARRPPPG----------WF---------------------- 53 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l-~R~~~~~----------~~---------------------- 53 (176)
+++++++||||+|+||++++++|+ ++|++|+++ .|+..+. ..
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~-----~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~ 78 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLA-----NDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQL 78 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHH
Confidence 345799999999999999999999 689998775 4542110 00
Q ss_pred -----------CCCcc------------cC-c---HHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccc
Q 030483 54 -----------PTALV------------QE-S---EEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPI 106 (176)
Q Consensus 54 -----------~~~~v------------~~-~---~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~ 106 (176)
..+.+ .+ + ....+++|+.++.++++++...+ ....+++++||...+...
T Consensus 79 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~~v~~sS~~~~~~~- 154 (254)
T PRK12746 79 KNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLL---RAEGRVINISSAEVRLGF- 154 (254)
T ss_pred HHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHh---hcCCEEEEECCHHhcCCC-
Confidence 00111 01 1 13456799999999999987641 123578888886554310
Q ss_pred cCCCccCCCCCCCccccCCCCCCCCCcchHHHHHHHHh-----hCCCceEEEeccCceEeCCC
Q 030483 107 FDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 107 ~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~-----~~~g~~~~ivRp~~v~G~~~ 164 (176)
+ ... .+.......+.+.+. ...++++++++|+.+.++-.
T Consensus 155 --------------~--~~~---~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~ 198 (254)
T PRK12746 155 --------------T--GSI---AYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDIN 198 (254)
T ss_pred --------------C--CCc---chHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcch
Confidence 0 000 111122233333222 24689999999999988743
No 106
>PRK07775 short chain dehydrogenase; Provisional
Probab=99.09 E-value=3.1e-10 Score=90.57 Aligned_cols=129 Identities=13% Similarity=0.077 Sum_probs=78.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------CCC-----------------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------WFP----------------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~----------------------- 54 (176)
.++++|||||+|+||++++++|+ ++|++|++++|+.... ...
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 83 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELA-----AAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEE 83 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999 6899999888754210 000
Q ss_pred ----CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCC
Q 030483 55 ----TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQ 114 (176)
Q Consensus 55 ----~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~ 114 (176)
.+.+ .++..+.+++|+.++.++++++...+. ..+..+|+++||...|..
T Consensus 84 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~-~~~~g~iv~isS~~~~~~---------- 152 (274)
T PRK07775 84 ALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMI-ERRRGDLIFVGSDVALRQ---------- 152 (274)
T ss_pred hcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCceEEEECChHhcCC----------
Confidence 0000 012234578999999888888754210 113457999988655431
Q ss_pred CCCCCccccCCCCCCCCCcchHHHHHHHHh-----hCCCceEEEeccCceEeC
Q 030483 115 LMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGA 162 (176)
Q Consensus 115 ~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~-----~~~g~~~~ivRp~~v~G~ 162 (176)
.| ...++...+...+.+... ...|++++++||+.+..+
T Consensus 153 -----~~-----~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~ 195 (274)
T PRK07775 153 -----RP-----HMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTG 195 (274)
T ss_pred -----CC-----CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCc
Confidence 11 000111222333333332 235899999999987554
No 107
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=99.08 E-value=3.5e-10 Score=89.15 Aligned_cols=131 Identities=12% Similarity=0.030 Sum_probs=80.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------CC-C------C-------------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------WF-P------T------------------- 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~------~------------------- 55 (176)
+++++|||||+|+||++++++|+ +.|++|+.++|+.... .. . +
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYL-----AEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFG 79 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-----HcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 35789999999999999999999 7999999998875320 00 0 0
Q ss_pred --Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCC
Q 030483 56 --ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMP 117 (176)
Q Consensus 56 --~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~ 117 (176)
+.+ .+++++.+++|+.++.++++++...+.....-.+|+++||.....
T Consensus 80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~-------------- 145 (257)
T PRK07067 80 GIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRR-------------- 145 (257)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCC--------------
Confidence 000 112345688999999999999865410000114788888743210
Q ss_pred CCccccCCCCCCCCCcchHHHHHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 118 YEVPFKEDSSRLPFPNFYYELEDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 118 ~~~p~~E~~~~~~~~~~y~~~e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
..| +...+.......+.+.+ + ...++++.++||+.++++.
T Consensus 146 -~~~-----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~ 190 (257)
T PRK07067 146 -GEA-----LVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPM 190 (257)
T ss_pred -CCC-----CCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchh
Confidence 000 10011112222222222 2 3578999999999999975
No 108
>PRK06138 short chain dehydrogenase; Provisional
Probab=99.08 E-value=3e-10 Score=88.90 Aligned_cols=36 Identities=22% Similarity=0.192 Sum_probs=32.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.++++|||||+|+||++|+++|+ ++|++|++++|+.
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~-----~~G~~v~~~~r~~ 39 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFA-----REGARVVVADRDA 39 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHH-----HCCCeEEEecCCH
Confidence 46799999999999999999999 6899999998874
No 109
>PRK07774 short chain dehydrogenase; Provisional
Probab=99.08 E-value=3.7e-10 Score=88.41 Aligned_cols=128 Identities=13% Similarity=-0.017 Sum_probs=81.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------CCC---------C-------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------WFP---------T------------- 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~---------~------------- 55 (176)
+++++|||||+|+||++++++|+ +.|++|++++|..... ... +
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~-----~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 79 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALA-----REGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVS 79 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999 6899999999874310 000 0
Q ss_pred -----Ccc------c-------------CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCc
Q 030483 56 -----ALV------Q-------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSL 111 (176)
Q Consensus 56 -----~~v------~-------------~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~ 111 (176)
+.+ . +...+.+++|+.++.++++++...+. ..+.++|+++||...|..
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~~sS~~~~~~------- 151 (250)
T PRK07774 80 AFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMA-KRGGGAIVNQSSTAAWLY------- 151 (250)
T ss_pred HhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHH-HhCCcEEEEEecccccCC-------
Confidence 001 1 11234578999999999988876421 112358999988655420
Q ss_pred cCCCCCCCccccCCCCCCCCCcchHHHHHHHHh-----hCCCceEEEeccCceEeCCC
Q 030483 112 AGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 112 ~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~-----~~~g~~~~ivRp~~v~G~~~ 164 (176)
. .++.......+.+.+. ...++++++++|+.+..+..
T Consensus 152 -------~---------~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~ 193 (250)
T PRK07774 152 -------S---------NFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEAT 193 (250)
T ss_pred -------c---------cccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccc
Confidence 0 0111122223333322 24589999999998876654
No 110
>PRK07985 oxidoreductase; Provisional
Probab=99.07 E-value=1.6e-09 Score=87.61 Aligned_cols=128 Identities=13% Similarity=0.001 Sum_probs=80.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-----------CC-C---------C-----------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----------WF-P---------T----------- 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~-~---------~----------- 55 (176)
.++++|||||+|+||++++++|+ +.|++|+.+.|+.... .. . +
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~-----~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 122 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYA-----REGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEA 122 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHH-----HCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHH
Confidence 34789999999999999999999 7999998876642110 00 0 0
Q ss_pred -------Ccc-----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCc
Q 030483 56 -------ALV-----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSL 111 (176)
Q Consensus 56 -------~~v-----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~ 111 (176)
+.+ .+++.+.+++|+.++.++++++...+. .-.+|+++||...|...
T Consensus 123 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~---~~g~iv~iSS~~~~~~~------ 193 (294)
T PRK07985 123 HKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLP---KGASIITTSSIQAYQPS------ 193 (294)
T ss_pred HHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhh---cCCEEEEECCchhccCC------
Confidence 000 112355789999999999998876421 12579999887655310
Q ss_pred cCCCCCCCccccCCCCCCCCCcchHHHHHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 112 AGQLMPYEVPFKEDSSRLPFPNFYYELEDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 112 ~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
| . . ..+...+.+.+.+.+ + ...|+++.+++|++|.++.
T Consensus 194 ---------~--~-~--~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~ 236 (294)
T PRK07985 194 ---------P--H-L--LDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTAL 236 (294)
T ss_pred ---------C--C-c--chhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCcccc
Confidence 0 0 0 001111112222222 2 3468999999999999884
No 111
>PRK08628 short chain dehydrogenase; Provisional
Probab=99.07 E-value=1.3e-09 Score=85.93 Aligned_cols=130 Identities=7% Similarity=-0.019 Sum_probs=81.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC--------CC-CC----------------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------WF-PT---------------------- 55 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~~-~~---------------------- 55 (176)
+.++++|||||+|+||++++++|+ +.|++|++++|+.... .. ..
T Consensus 5 l~~~~ilItGasggiG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (258)
T PRK08628 5 LKDKVVIVTGGASGIGAAISLRLA-----EEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVA 79 (258)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHH-----HcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 557899999999999999999999 7999999999876431 00 00
Q ss_pred -----Ccc---------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCC
Q 030483 56 -----ALV---------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQL 115 (176)
Q Consensus 56 -----~~v---------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~ 115 (176)
+.+ .++..+.+++|+.++.++.+++...+. ....+|+++||...+.+
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~~iv~~ss~~~~~~----------- 146 (258)
T PRK08628 80 KFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLK--ASRGAIVNISSKTALTG----------- 146 (258)
T ss_pred hcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhh--ccCcEEEEECCHHhccC-----------
Confidence 000 012345678899988888887765321 12357898887543310
Q ss_pred CCCCccccCCCCCCCCCcchHHHHHHHHh-----hCCCceEEEeccCceEeCC
Q 030483 116 MPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 116 ~~~~~p~~E~~~~~~~~~~y~~~e~~~~~-----~~~g~~~~ivRp~~v~G~~ 163 (176)
.+ ....+...+...+.+.+. ...++++..+||+.|+++.
T Consensus 147 ----~~-----~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~ 190 (258)
T PRK08628 147 ----QG-----GTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPL 190 (258)
T ss_pred ----CC-----CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHH
Confidence 00 000011111222333222 3568999999999999985
No 112
>PRK06128 oxidoreductase; Provisional
Probab=99.07 E-value=7.2e-10 Score=89.71 Aligned_cols=129 Identities=10% Similarity=-0.008 Sum_probs=82.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------------CC-------C--------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------------WF-------P-------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------------~~-------~-------------- 54 (176)
.+|++|||||+|+||++++++|+ +.|++|+...|+.... .. +
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~-----~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 128 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFA-----REGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERA 128 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHH-----HcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHH
Confidence 35899999999999999999999 7899998776543210 00 0
Q ss_pred ------CCcc-----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCc
Q 030483 55 ------TALV-----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSL 111 (176)
Q Consensus 55 ------~~~v-----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~ 111 (176)
.+.+ .+++...+++|+.++.++++++...+. .-.+|+++||...|...
T Consensus 129 ~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~---~~~~iv~~sS~~~~~~~------ 199 (300)
T PRK06128 129 VKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLP---PGASIINTGSIQSYQPS------ 199 (300)
T ss_pred HHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcC---cCCEEEEECCccccCCC------
Confidence 0000 112345789999999999999886521 12579999887665311
Q ss_pred cCCCCCCCccccCCCCCCCCCcchHHHHHHHH----h-hCCCceEEEeccCceEeCCC
Q 030483 112 AGQLMPYEVPFKEDSSRLPFPNFYYELEDVSA----S-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 112 ~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~----~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
+ ....+...+...+.+.+ + ...|+++.+++|+.|.++..
T Consensus 200 ---------~-----~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~ 243 (300)
T PRK06128 200 ---------P-----TLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQ 243 (300)
T ss_pred ---------C-----CchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCc
Confidence 0 00001111122222222 2 34689999999999998853
No 113
>PRK05876 short chain dehydrogenase; Provisional
Probab=99.07 E-value=3e-10 Score=90.96 Aligned_cols=129 Identities=14% Similarity=-0.028 Sum_probs=81.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------CC--------C---------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------WF--------P--------------- 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~~--------~--------------- 54 (176)
+++|++|||||+|+||++++++|+ +.|++|+.++|+.... .. +
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La-----~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 78 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFA-----RRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAF 78 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 557899999999999999999999 7999999888764210 00 0
Q ss_pred -----CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccC
Q 030483 55 -----TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 113 (176)
Q Consensus 55 -----~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g 113 (176)
.+.+ .++..+.+++|+.++.++++++...+.......+|+++||...+..
T Consensus 79 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~--------- 149 (275)
T PRK05876 79 RLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVP--------- 149 (275)
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccC---------
Confidence 0000 1123456789999998888887543100111357999988655421
Q ss_pred CCCCCCccccCCCCCCCCCcchHH--------HHHHHHh-hCCCceEEEeccCceEeCCC
Q 030483 114 QLMPYEVPFKEDSSRLPFPNFYYE--------LEDVSAS-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 114 ~~~~~~~p~~E~~~~~~~~~~y~~--------~e~~~~~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
.| ....|.. .+.+..+ ...|+++++++|+.+.++..
T Consensus 150 ------~~---------~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~ 194 (275)
T PRK05876 150 ------NA---------GLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLV 194 (275)
T ss_pred ------CC---------CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccc
Confidence 00 1112222 1222233 45689999999999988743
No 114
>PRK07024 short chain dehydrogenase; Provisional
Probab=99.06 E-value=5.5e-10 Score=88.14 Aligned_cols=35 Identities=23% Similarity=0.149 Sum_probs=32.0
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
++++|||||+|+||++++++|+ +.|++|+.++|++
T Consensus 2 ~~~vlItGas~gIG~~la~~l~-----~~G~~v~~~~r~~ 36 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYA-----RQGATLGLVARRT 36 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 4789999999999999999999 6899999999864
No 115
>PRK05875 short chain dehydrogenase; Provisional
Probab=99.05 E-value=1.1e-09 Score=87.23 Aligned_cols=37 Identities=22% Similarity=0.159 Sum_probs=33.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|.++++|||||+|+||++++++|+ ++|++|++++|+.
T Consensus 5 ~~~k~vlItGasg~IG~~la~~l~-----~~G~~V~~~~r~~ 41 (276)
T PRK05875 5 FQDRTYLVTGGGSGIGKGVAAGLV-----AAGAAVMIVGRNP 41 (276)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHH-----HCCCeEEEEeCCH
Confidence 556899999999999999999999 7999999999864
No 116
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.05 E-value=2.9e-09 Score=82.61 Aligned_cols=132 Identities=12% Similarity=0.065 Sum_probs=81.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC----------------------CCCcc------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF----------------------PTALV------ 58 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~----------------------~~~~v------ 58 (176)
+++|++|||||+|+||++++++|+ ++|++|+.++|+...... ..+.+
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~ 77 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFL-----AQGAQVYGVDKQDKPDLSGNFHFLQLDLSDDLEPLFDWVPSVDILCNTAGI 77 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHH-----HCCCEEEEEeCCcccccCCcEEEEECChHHHHHHHHHhhCCCCEEEECCCC
Confidence 356899999999999999999999 689999999987532110 00111
Q ss_pred -----------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCC
Q 030483 59 -----------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSS 127 (176)
Q Consensus 59 -----------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~ 127 (176)
.++.++.+++|+.++.++++++...+. ..+..+|+++||...+.. .+ ..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~~sS~~~~~~---------------~~---~~- 137 (235)
T PRK06550 78 LDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQML-ERKSGIIINMCSIASFVA---------------GG---GG- 137 (235)
T ss_pred CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCcEEEEEcChhhccC---------------CC---CC-
Confidence 112345688999999888888765310 112357888887644310 00 00
Q ss_pred CCCCCcchHHHHHHH----Hh-hCCCceEEEeccCceEeCCC
Q 030483 128 RLPFPNFYYELEDVS----AS-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 128 ~~~~~~~y~~~e~~~----~~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
..+...+...+.+. .+ ...++++++++|+++..+..
T Consensus 138 -~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~ 178 (235)
T PRK06550 138 -AAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMT 178 (235)
T ss_pred -cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCccc
Confidence 00111122222222 22 35689999999999987754
No 117
>PRK06398 aldose dehydrogenase; Validated
Probab=99.05 E-value=3.3e-09 Score=83.98 Aligned_cols=90 Identities=11% Similarity=0.045 Sum_probs=62.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC--------C------------------CCcc--
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF--------P------------------TALV-- 58 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~--------~------------------~~~v-- 58 (176)
+.+|++|||||+|+||++++++|+ +.|++|+.++|+...... . .+.+
T Consensus 4 l~gk~vlItGas~gIG~~ia~~l~-----~~G~~Vi~~~r~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~ 78 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAVVNRLK-----EEGSNVINFDIKEPSYNDVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVN 78 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-----HCCCeEEEEeCCccccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 456899999999999999999999 799999999987543110 0 0001
Q ss_pred --------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceee
Q 030483 59 --------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 102 (176)
Q Consensus 59 --------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~y 102 (176)
.+++.+.+++|+.++.++++++...+. ..+..+|+++||...+
T Consensus 79 ~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~g~iv~isS~~~~ 135 (258)
T PRK06398 79 NAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYML-KQDKGVIINIASVQSF 135 (258)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-HcCCeEEEEeCcchhc
Confidence 112345689999998888887765321 0124689999886544
No 118
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=99.05 E-value=5.2e-10 Score=87.99 Aligned_cols=138 Identities=10% Similarity=-0.014 Sum_probs=84.3
Q ss_pred CCcCCCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------CCC----------------
Q 030483 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------WFP---------------- 54 (176)
Q Consensus 1 ~~~~~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~---------------- 54 (176)
|+....+.++++|||||+|+||++++++|+ +.|++|+.++|+.... ...
T Consensus 1 ~~~~~~l~~k~~lItGas~giG~~ia~~L~-----~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~ 75 (254)
T PRK08085 1 MNDLFSLAGKNILITGSAQGIGFLLATGLA-----EYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEA 75 (254)
T ss_pred CcccccCCCCEEEEECCCChHHHHHHHHHH-----HcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHH
Confidence 455444557899999999999999999999 6899999999874310 000
Q ss_pred -----------CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeeccccc
Q 030483 55 -----------TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIF 107 (176)
Q Consensus 55 -----------~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~ 107 (176)
.+.+ .+++++.+++|+.++.++++++...+. ..+..+|+++||.....
T Consensus 76 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~isS~~~~~---- 150 (254)
T PRK08085 76 AIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMV-KRQAGKIINICSMQSEL---- 150 (254)
T ss_pred HHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-HcCCcEEEEEccchhcc----
Confidence 0000 112345788999998888887765411 11346789888753211
Q ss_pred CCCccCCCCCCCccccCCCCCCCCCcchHHHHHHHHh-----hCCCceEEEeccCceEeCCC
Q 030483 108 DPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 108 d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~-----~~~g~~~~ivRp~~v~G~~~ 164 (176)
+.. ....+...+...+.+.+. ...++++.+++|+++..+..
T Consensus 151 -------------~~~---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~ 196 (254)
T PRK08085 151 -------------GRD---TITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMT 196 (254)
T ss_pred -------------CCC---CCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcch
Confidence 000 000111112222322222 35689999999999988743
No 119
>PRK05717 oxidoreductase; Validated
Probab=99.04 E-value=1.3e-09 Score=85.85 Aligned_cols=130 Identities=18% Similarity=0.104 Sum_probs=80.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------C-CC--------------------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------W-FP-------------------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~-------------------------- 54 (176)
.+|++|||||+|+||++++++|+ +.|++|+.++|+..+. . ..
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~-----~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 83 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLI-----AEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFG 83 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHH-----HcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 46899999999999999999999 7899999988764210 0 00
Q ss_pred -CCcc------c------------CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCC
Q 030483 55 -TALV------Q------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQL 115 (176)
Q Consensus 55 -~~~v------~------------~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~ 115 (176)
.+.+ . +++.+.+++|+.++.++++++...+. . ...+|+++||...+..
T Consensus 84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~-~~g~ii~~sS~~~~~~----------- 150 (255)
T PRK05717 84 RLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLR-A-HNGAIVNLASTRARQS----------- 150 (255)
T ss_pred CCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-H-cCcEEEEEcchhhcCC-----------
Confidence 0001 0 11345789999999999999875321 1 1257888887544320
Q ss_pred CCCCccccCCCCCCCCCcchHHHHHHHHh----hCCCceEEEeccCceEeCCC
Q 030483 116 MPYEVPFKEDSSRLPFPNFYYELEDVSAS----YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 116 ~~~~~p~~E~~~~~~~~~~y~~~e~~~~~----~~~g~~~~ivRp~~v~G~~~ 164 (176)
.+ .. .++...+...+.+.+. ...++++.+++|+++.++..
T Consensus 151 ----~~---~~--~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~ 194 (255)
T PRK05717 151 ----EP---DT--EAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDP 194 (255)
T ss_pred ----CC---CC--cchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCcc
Confidence 00 00 0111112222333322 23358999999999988653
No 120
>PRK06101 short chain dehydrogenase; Provisional
Probab=99.04 E-value=1.9e-09 Score=84.35 Aligned_cols=127 Identities=14% Similarity=0.079 Sum_probs=78.7
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------CCCC------------------------Cc-c
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------WFPT------------------------AL-V 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~------------------------~~-v 58 (176)
+++|||||+|+||++++++|+ .+|++|++++|+.... .... +. +
T Consensus 2 ~~vlItGas~giG~~la~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i 76 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYA-----KQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWI 76 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHH-----hCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEE
Confidence 579999999999999999999 7999999999874210 0000 00 0
Q ss_pred --------c----Cc---HHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCcccc
Q 030483 59 --------Q----ES---EEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFK 123 (176)
Q Consensus 59 --------~----~~---~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~ 123 (176)
. .+ .++.+++|+.++.++++++...+. +-++++++||..... ..|..
T Consensus 77 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~iv~isS~~~~~---------------~~~~~ 138 (240)
T PRK06101 77 FNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLS---CGHRVVIVGSIASEL---------------ALPRA 138 (240)
T ss_pred EcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhh---cCCeEEEEechhhcc---------------CCCCC
Confidence 0 01 235689999999999999886421 124677777642210 00100
Q ss_pred CCCCCCCCCcchHHHHHHH----Hh-hCCCceEEEeccCceEeCCC
Q 030483 124 EDSSRLPFPNFYYELEDVS----AS-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 124 E~~~~~~~~~~y~~~e~~~----~~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
. ++.......+.+. .+ ...+++++++||++++++..
T Consensus 139 ~-----~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~ 179 (240)
T PRK06101 139 E-----AYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLT 179 (240)
T ss_pred c-----hhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCc
Confidence 0 0111111222222 12 45689999999999998753
No 121
>PRK08219 short chain dehydrogenase; Provisional
Probab=99.04 E-value=1.3e-09 Score=83.94 Aligned_cols=35 Identities=23% Similarity=0.294 Sum_probs=31.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|+|++|||||+|+||++++++|+ ++ ++|++++|+.
T Consensus 2 ~~~~vlVtG~~g~iG~~l~~~l~-----~~-~~V~~~~r~~ 36 (227)
T PRK08219 2 ERPTALITGASRGIGAAIARELA-----PT-HTLLLGGRPA 36 (227)
T ss_pred CCCEEEEecCCcHHHHHHHHHHH-----hh-CCEEEEeCCH
Confidence 45789999999999999999999 56 9999999975
No 122
>PRK08643 acetoin reductase; Validated
Probab=99.02 E-value=9.8e-10 Score=86.43 Aligned_cols=36 Identities=25% Similarity=0.239 Sum_probs=32.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|+|++|||||+|+||++++++|+ +.|++|++++|+.
T Consensus 1 ~~k~~lItGas~giG~~la~~l~-----~~G~~v~~~~r~~ 36 (256)
T PRK08643 1 MSKVALVTGAGQGIGFAIAKRLV-----EDGFKVAIVDYNE 36 (256)
T ss_pred CCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 46789999999999999999999 7899999999864
No 123
>PRK07102 short chain dehydrogenase; Provisional
Probab=99.02 E-value=9.9e-10 Score=85.84 Aligned_cols=128 Identities=12% Similarity=0.053 Sum_probs=78.3
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC-----------CC---------C--------------
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----------FP---------T-------------- 55 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-----------~~---------~-------------- 55 (176)
|+++||||+|+||.+++++|+ +.|++|++++|+..+.. .. +
T Consensus 2 ~~vlItGas~giG~~~a~~l~-----~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 76 (243)
T PRK07102 2 KKILIIGATSDIARACARRYA-----AAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPAL 76 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHH-----hcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhc
Confidence 589999999999999999999 68999999998753210 00 0
Q ss_pred -Ccc-------------cCc---HHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCC
Q 030483 56 -ALV-------------QES---EEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPY 118 (176)
Q Consensus 56 -~~v-------------~~~---~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~ 118 (176)
+.+ ..+ ..+.+++|+.++.++++++...+. ..+..+++++||.....
T Consensus 77 ~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~~sS~~~~~--------------- 140 (243)
T PRK07102 77 PDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFE-ARGSGTIVGISSVAGDR--------------- 140 (243)
T ss_pred CCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHH-hCCCCEEEEEecccccC---------------
Confidence 001 111 234678999999888888765321 11346788888742210
Q ss_pred CccccCCCCCCCCCcchHHHHH----HHHh-hCCCceEEEeccCceEeCC
Q 030483 119 EVPFKEDSSRLPFPNFYYELED----VSAS-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 119 ~~p~~E~~~~~~~~~~y~~~e~----~~~~-~~~g~~~~ivRp~~v~G~~ 163 (176)
..+ .. ..+.......+. +..+ ...++++.+++|+.+.++.
T Consensus 141 ~~~--~~---~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~ 185 (243)
T PRK07102 141 GRA--SN---YVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPM 185 (243)
T ss_pred CCC--CC---cccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChh
Confidence 000 00 001111111111 2122 4568999999999998874
No 124
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.02 E-value=3.8e-09 Score=82.06 Aligned_cols=37 Identities=24% Similarity=0.179 Sum_probs=32.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.++++|||||+|+||+++++.|+ +.|++|+.+.|+..
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~-----~~G~~v~~~~~~~~ 40 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLA-----AQGANVVINYASSE 40 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCch
Confidence 45799999999999999999999 68999988887654
No 125
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.02 E-value=6.3e-10 Score=87.07 Aligned_cols=131 Identities=12% Similarity=0.009 Sum_probs=78.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEE-ecCCCCC---------CC--------C--------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGA-ARRPPPG---------WF--------P-------------- 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l-~R~~~~~---------~~--------~-------------- 54 (176)
|.++++|||||+|+||++++++|+ +.|++|+.+ .|+.... .. +
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~-----~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 76 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLA-----EEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQI 76 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 345799999999999999999999 789998764 5543210 00 0
Q ss_pred ------CCcc------------cC----cHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCcc
Q 030483 55 ------TALV------------QE----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 112 (176)
Q Consensus 55 ------~~~v------------~~----~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~ 112 (176)
.+.+ .+ .....+++|..++.++++++...+. ..+.++|+++||...+.
T Consensus 77 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~g~iv~~sS~~~~~--------- 146 (250)
T PRK08063 77 DEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLME-KVGGGKIISLSSLGSIR--------- 146 (250)
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCeEEEEEcchhhcc---------
Confidence 0001 00 1133577999998888888876421 11346899998854321
Q ss_pred CCCCCCCccccCCCCCCCCCcchHHHHHHHHh-----hCCCceEEEeccCceEeCC
Q 030483 113 GQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 113 g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~-----~~~g~~~~ivRp~~v~G~~ 163 (176)
+.. +...+...+...+.+.+. ...++++.+++|+.+..+.
T Consensus 147 --------~~~---~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~ 191 (250)
T PRK08063 147 --------YLE---NYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDA 191 (250)
T ss_pred --------CCC---CccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCch
Confidence 000 000011112222333322 2468999999999997654
No 126
>PRK12742 oxidoreductase; Provisional
Probab=99.01 E-value=4.1e-09 Score=81.83 Aligned_cols=131 Identities=8% Similarity=-0.014 Sum_probs=78.9
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC-----------CC--CC----------------CC
Q 030483 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP-----------GW--FP----------------TA 56 (176)
Q Consensus 6 ~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~-----------~~--~~----------------~~ 56 (176)
+++++++|||||+|+||++++++|+ ++|++|+.+.|+... .. .+ .+
T Consensus 3 ~~~~k~vlItGasggIG~~~a~~l~-----~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id 77 (237)
T PRK12742 3 AFTGKKVLVLGGSRGIGAAIVRRFV-----TDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALD 77 (237)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCc
Confidence 3557899999999999999999999 789999887654211 00 00 00
Q ss_pred cc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCc
Q 030483 57 LV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEV 120 (176)
Q Consensus 57 ~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~ 120 (176)
.+ .+++++.+++|+.++.+++..+...+ . .-.+++++||.... ..
T Consensus 78 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~-~~g~iv~isS~~~~----------------~~ 138 (237)
T PRK12742 78 ILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQM--P-EGGRIIIIGSVNGD----------------RM 138 (237)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHH--h-cCCeEEEEeccccc----------------cC
Confidence 01 11235678999999888876666542 1 23578888874321 01
Q ss_pred cccCCCCCCCCCcchHHHHHHHHh-----hCCCceEEEeccCceEeCC
Q 030483 121 PFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 121 p~~E~~~~~~~~~~y~~~e~~~~~-----~~~g~~~~ivRp~~v~G~~ 163 (176)
|..... .+...+...+.+.+. ...++++.+++|+.+..+.
T Consensus 139 ~~~~~~---~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~ 183 (237)
T PRK12742 139 PVAGMA---AYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDA 183 (237)
T ss_pred CCCCCc---chHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCc
Confidence 110000 111222233333322 3568999999999987653
No 127
>PRK06701 short chain dehydrogenase; Provisional
Probab=99.01 E-value=1.9e-09 Score=87.02 Aligned_cols=129 Identities=11% Similarity=-0.021 Sum_probs=82.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-----------CCC------C---------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----------WFP------T--------------- 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~~------~--------------- 55 (176)
++|++|||||+|+||++++++|+ +.|++|+.++|+.... ... +
T Consensus 45 ~~k~iLItGasggIG~~la~~l~-----~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~ 119 (290)
T PRK06701 45 KGKVALITGGDSGIGRAVAVLFA-----KEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETV 119 (290)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 35789999999999999999999 6899999988864210 000 0
Q ss_pred ------Ccc-----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCcc
Q 030483 56 ------ALV-----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 112 (176)
Q Consensus 56 ------~~v-----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~ 112 (176)
+.+ .+.+.+.+++|+.++.++++++...+. .-.+++++||...|...
T Consensus 120 ~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~---~~g~iV~isS~~~~~~~------- 189 (290)
T PRK06701 120 RELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLK---QGSAIINTGSITGYEGN------- 189 (290)
T ss_pred HHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHh---hCCeEEEEecccccCCC-------
Confidence 000 011245688999999999999876421 12579999887665311
Q ss_pred CCCCCCCccccCCCCCCCCCcchHHHHHHHHh-----hCCCceEEEeccCceEeCCC
Q 030483 113 GQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 113 g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~-----~~~g~~~~ivRp~~v~G~~~ 164 (176)
+. .. .+.......+.+.+. ...++++.++||+.++.+..
T Consensus 190 --------~~---~~--~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~ 233 (290)
T PRK06701 190 --------ET---LI--DYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLI 233 (290)
T ss_pred --------CC---cc--hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCccc
Confidence 10 00 011111222222222 24589999999999988743
No 128
>PRK07326 short chain dehydrogenase; Provisional
Probab=99.01 E-value=1.3e-09 Score=84.60 Aligned_cols=37 Identities=38% Similarity=0.354 Sum_probs=33.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
++++++|||||+|+||++++++|+ +.|++|++++|++
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~-----~~g~~V~~~~r~~ 40 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALL-----AEGYKVAITARDQ 40 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHH-----HCCCEEEEeeCCH
Confidence 446899999999999999999999 6899999999875
No 129
>PRK08017 oxidoreductase; Provisional
Probab=99.00 E-value=4.1e-09 Score=82.72 Aligned_cols=36 Identities=33% Similarity=0.481 Sum_probs=32.4
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+++|||||+|+||+++++.|+ +.|++|++++|+..
T Consensus 2 ~k~vlVtGasg~IG~~la~~l~-----~~g~~v~~~~r~~~ 37 (256)
T PRK08017 2 QKSVLITGCSSGIGLEAALELK-----RRGYRVLAACRKPD 37 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHH
Confidence 4689999999999999999999 68999999998753
No 130
>PRK07825 short chain dehydrogenase; Provisional
Probab=99.00 E-value=1.4e-09 Score=86.42 Aligned_cols=37 Identities=24% Similarity=0.060 Sum_probs=33.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.++++|||||+|.||++++++|+ +.|++|++++|++
T Consensus 3 ~~~~~ilVtGasggiG~~la~~l~-----~~G~~v~~~~r~~ 39 (273)
T PRK07825 3 LRGKVVAITGGARGIGLATARALA-----ALGARVAIGDLDE 39 (273)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEECCH
Confidence 446799999999999999999999 6899999998864
No 131
>PRK06123 short chain dehydrogenase; Provisional
Probab=99.00 E-value=1.4e-09 Score=85.02 Aligned_cols=35 Identities=20% Similarity=0.115 Sum_probs=30.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
|++++|||||+|+||++++++|+ +.|+.|+...++
T Consensus 1 ~~~~~lVtG~~~~iG~~~a~~l~-----~~G~~vv~~~~~ 35 (248)
T PRK06123 1 MRKVMIITGASRGIGAATALLAA-----ERGYAVCLNYLR 35 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HCCCeEEEecCC
Confidence 35789999999999999999999 689988776543
No 132
>PRK06197 short chain dehydrogenase; Provisional
Probab=99.00 E-value=2e-09 Score=87.24 Aligned_cols=36 Identities=28% Similarity=0.203 Sum_probs=32.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.++++|||||+|+||++++++|+ +.|++|++++|+.
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~-----~~G~~vi~~~r~~ 50 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALA-----AKGAHVVLAVRNL 50 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 46899999999999999999999 6899999999863
No 133
>PRK06194 hypothetical protein; Provisional
Probab=98.99 E-value=1.7e-09 Score=86.56 Aligned_cols=37 Identities=24% Similarity=0.139 Sum_probs=33.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.++++|||||+|+||++|+++|+ ++|++|+.++|+.
T Consensus 4 ~~~k~vlVtGasggIG~~la~~l~-----~~G~~V~~~~r~~ 40 (287)
T PRK06194 4 FAGKVAVITGAASGFGLAFARIGA-----ALGMKLVLADVQQ 40 (287)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHH-----HCCCEEEEEeCCh
Confidence 345799999999999999999999 7899999998863
No 134
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.99 E-value=8.7e-10 Score=86.12 Aligned_cols=37 Identities=19% Similarity=0.220 Sum_probs=33.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.++++|||||+|+||++|+++|+ +.|++|++++|++.
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~-----~~G~~V~~~~r~~~ 40 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFA-----AEGARVVVTDRNEE 40 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHH
Confidence 45799999999999999999999 78999999999853
No 135
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=98.99 E-value=3e-09 Score=83.51 Aligned_cols=34 Identities=24% Similarity=0.307 Sum_probs=31.5
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|+++||||+|+||.+++++|+ +.|++|++++|++
T Consensus 1 ~~vlItGasg~iG~~la~~l~-----~~G~~V~~~~r~~ 34 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFI-----QQGHKVIATGRRQ 34 (248)
T ss_pred CEEEEECCCchHHHHHHHHHH-----HCCCEEEEEECCH
Confidence 479999999999999999999 7899999999875
No 136
>PRK08703 short chain dehydrogenase; Provisional
Probab=98.99 E-value=9.3e-09 Score=80.14 Aligned_cols=38 Identities=21% Similarity=0.161 Sum_probs=34.1
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 6 ~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
++.++++|||||+|+||++++++|+ +.|++|++++|+.
T Consensus 3 ~l~~k~vlItG~sggiG~~la~~l~-----~~g~~V~~~~r~~ 40 (239)
T PRK08703 3 TLSDKTILVTGASQGLGEQVAKAYA-----AAGATVILVARHQ 40 (239)
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHH-----HcCCEEEEEeCCh
Confidence 3556899999999999999999999 6899999999865
No 137
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.98 E-value=2.1e-09 Score=83.50 Aligned_cols=38 Identities=21% Similarity=0.059 Sum_probs=33.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
+.++++|||||+|+||+++++.|+ +.|++|++++|++.
T Consensus 3 ~~~~~vlItGa~g~iG~~~a~~l~-----~~G~~V~~~~r~~~ 40 (238)
T PRK05786 3 LKGKKVAIIGVSEGLGYAVAYFAL-----KEGAQVCINSRNEN 40 (238)
T ss_pred cCCcEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCHH
Confidence 345799999999999999999999 79999999999653
No 138
>PRK07856 short chain dehydrogenase; Provisional
Probab=98.98 E-value=5.2e-09 Score=82.29 Aligned_cols=90 Identities=16% Similarity=0.048 Sum_probs=62.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC-----C--C-C---CC------------------Cc
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP-----G--W-F---PT------------------AL 57 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~-----~--~-~---~~------------------~~ 57 (176)
+++|++|||||+|+||++++++|+ ..|++|+.++|+... . . . .+ +.
T Consensus 4 ~~~k~~lItGas~gIG~~la~~l~-----~~g~~v~~~~r~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 78 (252)
T PRK07856 4 LTGRVVLVTGGTRGIGAGIARAFL-----AAGATVVVCGRRAPETVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDV 78 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCChhhhhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 456899999999999999999999 689999999987521 0 0 0 00 00
Q ss_pred c----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEecccee
Q 030483 58 V----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 101 (176)
Q Consensus 58 v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~ 101 (176)
+ .+.+++.+++|+.++.++++++...+.......+|+++||...
T Consensus 79 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~ 138 (252)
T PRK07856 79 LVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSG 138 (252)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccc
Confidence 1 1123457889999999999887653210112357899887644
No 139
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=98.97 E-value=1.4e-09 Score=85.77 Aligned_cols=89 Identities=17% Similarity=0.089 Sum_probs=61.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------C-CC---------C-------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------W-FP---------T------------- 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~-~~---------~------------- 55 (176)
+++++|||||+|+||++++++|+ +.|++|+.++|+.... . .. +
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~ 85 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALG-----EAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLE 85 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999 6899999998864210 0 00 0
Q ss_pred -----Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhc-CCCCCCccEEEEeccceee
Q 030483 56 -----ALV----------------QESEEVNIFKNSTMLKNVLSVLVSS-NSGRSRLRHVALLTGTKHY 102 (176)
Q Consensus 56 -----~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~-~~~~~~v~~vv~~Ss~~~y 102 (176)
+.+ .+.+.+.+++|+.++.++++++... +. ..+..+|+++||...+
T Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~-~~~~~~~v~~sS~~~~ 153 (259)
T PRK08213 86 RFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMI-PRGYGRIINVASVAGL 153 (259)
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHH-hcCCeEEEEECChhhc
Confidence 000 1122456789999999999987643 11 1235689999886554
No 140
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=98.97 E-value=3.8e-09 Score=82.60 Aligned_cols=132 Identities=11% Similarity=0.078 Sum_probs=81.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-------CC-C------------------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------WF-P------------------------ 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~~-~------------------------ 54 (176)
+.+|++|||||+|+||.+++++|+ +.|++|+.++|+.... .. .
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~-----~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLA-----EAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEE 77 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 456899999999999999999999 7999999999864210 00 0
Q ss_pred ---CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCC
Q 030483 55 ---TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQL 115 (176)
Q Consensus 55 ---~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~ 115 (176)
.+.+ .+.+++.+++|+.++.++++++...+.......+++++||...|...
T Consensus 78 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---------- 147 (248)
T TIGR01832 78 FGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGG---------- 147 (248)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCC----------
Confidence 0000 01234567899999888888876431001113578999887655310
Q ss_pred CCCCccccCCCCCCCCCcchHHHHHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 116 MPYEVPFKEDSSRLPFPNFYYELEDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 116 ~~~~~p~~E~~~~~~~~~~y~~~e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
+ ..+ .+.......+.+.+ + ...++++.+++|+.|..+.
T Consensus 148 -----~---~~~--~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~ 190 (248)
T TIGR01832 148 -----I---RVP--SYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNN 190 (248)
T ss_pred -----C---CCc--hhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcc
Confidence 1 000 11111222222222 2 3468999999999997764
No 141
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=98.97 E-value=9e-09 Score=81.47 Aligned_cols=95 Identities=9% Similarity=0.012 Sum_probs=64.0
Q ss_pred CCcCCCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC--------C------------------
Q 030483 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF--------P------------------ 54 (176)
Q Consensus 1 ~~~~~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~--------~------------------ 54 (176)
|.....+.++++|||||+|+||++++++|+ ++|++|+.++|+...... +
T Consensus 1 ~~~~~~l~~k~vlItG~s~gIG~~la~~l~-----~~G~~v~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (266)
T PRK06171 1 MQDWLNLQGKIIIVTGGSSGIGLAIVKELL-----ANGANVVNADIHGGDGQHENYQFVPTDVSSAEEVNHTVAEIIEKF 75 (266)
T ss_pred CcccccCCCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEeCCccccccCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 333334567899999999999999999999 799999999887543110 0
Q ss_pred --CCcc------c-------------------CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEecccee
Q 030483 55 --TALV------Q-------------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 101 (176)
Q Consensus 55 --~~~v------~-------------------~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~ 101 (176)
.+.+ . ++++..+++|+.++.++++++...+. ..+-.+|+++||...
T Consensus 76 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~g~iv~isS~~~ 148 (266)
T PRK06171 76 GRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMV-KQHDGVIVNMSSEAG 148 (266)
T ss_pred CCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHH-hcCCcEEEEEccccc
Confidence 0000 0 01234678999999888888876421 112357888887644
No 142
>PRK06949 short chain dehydrogenase; Provisional
Probab=98.97 E-value=1.7e-09 Score=84.96 Aligned_cols=40 Identities=30% Similarity=0.243 Sum_probs=35.0
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 4 ~~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
...+.++++|||||+|+||++++++|+ ..|++|++++|+.
T Consensus 4 ~~~~~~k~ilItGasg~IG~~~a~~l~-----~~G~~Vi~~~r~~ 43 (258)
T PRK06949 4 SINLEGKVALVTGASSGLGARFAQVLA-----QAGAKVVLASRRV 43 (258)
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 334567899999999999999999999 6899999999864
No 143
>PRK08251 short chain dehydrogenase; Provisional
Probab=98.97 E-value=5e-09 Score=81.95 Aligned_cols=36 Identities=22% Similarity=0.265 Sum_probs=32.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|++++|||||+|+||++++++|+ +.|++|+.++|++
T Consensus 1 ~~k~vlItGas~giG~~la~~l~-----~~g~~v~~~~r~~ 36 (248)
T PRK08251 1 TRQKILITGASSGLGAGMAREFA-----AKGRDLALCARRT 36 (248)
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HcCCEEEEEeCCH
Confidence 35789999999999999999999 6899999999875
No 144
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.97 E-value=1.8e-09 Score=84.44 Aligned_cols=87 Identities=10% Similarity=0.001 Sum_probs=59.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------C-CC----------------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------W-FP---------------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~-~~---------------------- 54 (176)
.++++|||||+||||++++++|+ ++|++|+.+.|+.... . ..
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~-----~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 79 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLA-----KEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATI 79 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHH
Confidence 35799999999999999999999 7999988776542110 0 00
Q ss_pred -----CCcc-------------cCc---HHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceee
Q 030483 55 -----TALV-------------QES---EEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 102 (176)
Q Consensus 55 -----~~~v-------------~~~---~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~y 102 (176)
.+.+ ..+ .++.+++|+.++.++++++.+.. ....+|+++||...|
T Consensus 80 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~---~~~~~iv~~sS~~~~ 145 (252)
T PRK06077 80 DRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEM---REGGAIVNIASVAGI 145 (252)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHh---hcCcEEEEEcchhcc
Confidence 0000 011 23567899999888888887652 122578998886654
No 145
>PRK12743 oxidoreductase; Provisional
Probab=98.97 E-value=1.9e-09 Score=85.05 Aligned_cols=131 Identities=8% Similarity=-0.017 Sum_probs=78.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------CC-C---------C------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------WF-P---------T------------ 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~-~---------~------------ 55 (176)
|++++|||||+|+||++++++|+ +.|++|+.+.|+.... .. . +
T Consensus 1 ~~k~vlItGas~giG~~~a~~l~-----~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 75 (256)
T PRK12743 1 MAQVAIVTASDSGIGKACALLLA-----QQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLI 75 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHH
Confidence 45789999999999999999999 7999998886643210 00 0 0
Q ss_pred ------Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccC
Q 030483 56 ------ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 113 (176)
Q Consensus 56 ------~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g 113 (176)
+.+ .+++.+.+++|+.+..++++++...+....+-.+|+++||....
T Consensus 76 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~----------- 144 (256)
T PRK12743 76 QRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEH----------- 144 (256)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecccc-----------
Confidence 000 11234568899999999988877642001012478888874211
Q ss_pred CCCCCCccccCCCCCCCCCcchHHHHHHHHh-----hCCCceEEEeccCceEeCC
Q 030483 114 QLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 114 ~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~~-----~~~g~~~~ivRp~~v~G~~ 163 (176)
.+.... ..+...+...+.+.+. ...++++..++|+.+..+.
T Consensus 145 ------~~~~~~---~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~ 190 (256)
T PRK12743 145 ------TPLPGA---SAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPM 190 (256)
T ss_pred ------CCCCCc---chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCcc
Confidence 111000 0011112222333222 3568999999999999874
No 146
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=98.96 E-value=2e-09 Score=84.78 Aligned_cols=36 Identities=25% Similarity=0.245 Sum_probs=32.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|++++|||||+|+||++++++|+ +.|++|+.++|+.
T Consensus 1 m~k~ilItG~~~~IG~~la~~l~-----~~g~~vi~~~r~~ 36 (259)
T PRK12384 1 MNQVAVVIGGGQTLGAFLCHGLA-----EEGYRVAVADINS 36 (259)
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEECCH
Confidence 46789999999999999999999 6899999999864
No 147
>PRK07454 short chain dehydrogenase; Provisional
Probab=98.96 E-value=1.1e-09 Score=85.44 Aligned_cols=35 Identities=29% Similarity=0.307 Sum_probs=32.4
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+|++|||||+|+||++|+++|+ ++|++|++++|++
T Consensus 6 ~k~vlItG~sg~iG~~la~~l~-----~~G~~V~~~~r~~ 40 (241)
T PRK07454 6 MPRALITGASSGIGKATALAFA-----KAGWDLALVARSQ 40 (241)
T ss_pred CCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 4789999999999999999999 7999999999974
No 148
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=98.95 E-value=8.6e-09 Score=80.19 Aligned_cols=35 Identities=23% Similarity=0.293 Sum_probs=32.0
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+++|||||+|+||++++++|. ++|+.|++++|+.
T Consensus 2 ~k~vlItG~s~~iG~~la~~l~-----~~g~~vi~~~r~~ 36 (245)
T PRK12824 2 KKIALVTGAKRGIGSAIARELL-----NDGYRVIATYFSG 36 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHH-----HcCCEEEEEeCCc
Confidence 4689999999999999999999 6899999999873
No 149
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=98.94 E-value=1.9e-09 Score=83.97 Aligned_cols=31 Identities=23% Similarity=0.153 Sum_probs=27.9
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEe
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAA 45 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~ 45 (176)
+++|||||+|+||++++++|+ +.|++|+++.
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~-----~~g~~v~~~~ 32 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLA-----QEGYTVAVNY 32 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEe
Confidence 579999999999999999999 6899987743
No 150
>PRK05693 short chain dehydrogenase; Provisional
Probab=98.94 E-value=6.5e-09 Score=82.77 Aligned_cols=34 Identities=35% Similarity=0.586 Sum_probs=31.7
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|++|||||+|+||++++++|+ ..|++|++++|+.
T Consensus 2 k~vlItGasggiG~~la~~l~-----~~G~~V~~~~r~~ 35 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFK-----AAGYEVWATARKA 35 (274)
T ss_pred CEEEEecCCChHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 689999999999999999999 6899999999874
No 151
>PRK06114 short chain dehydrogenase; Provisional
Probab=98.93 E-value=8.5e-09 Score=81.20 Aligned_cols=37 Identities=22% Similarity=0.083 Sum_probs=33.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.++++|||||+|+||++++++|+ +.|++|++++|+.
T Consensus 6 ~~~k~~lVtG~s~gIG~~ia~~l~-----~~G~~v~~~~r~~ 42 (254)
T PRK06114 6 LDGQVAFVTGAGSGIGQRIAIGLA-----QAGADVALFDLRT 42 (254)
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCc
Confidence 456899999999999999999999 7999999999864
No 152
>PRK07074 short chain dehydrogenase; Provisional
Probab=98.93 E-value=9.7e-09 Score=80.81 Aligned_cols=37 Identities=24% Similarity=0.268 Sum_probs=33.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
|++++|||||+|+||++++++|+ +.|++|++++|++.
T Consensus 1 ~~k~ilItGat~~iG~~la~~L~-----~~g~~v~~~~r~~~ 37 (257)
T PRK07074 1 TKRTALVTGAAGGIGQALARRFL-----AAGDRVLALDIDAA 37 (257)
T ss_pred CCCEEEEECCcchHHHHHHHHHH-----HCCCEEEEEeCCHH
Confidence 35789999999999999999999 68999999998743
No 153
>PRK12747 short chain dehydrogenase; Provisional
Probab=98.92 E-value=6.4e-09 Score=81.69 Aligned_cols=128 Identities=10% Similarity=-0.015 Sum_probs=78.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC-CC---------------------CCC------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP-PP---------------------GWF------------ 53 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~-~~---------------------~~~------------ 53 (176)
++|++|||||+|+||++++++|+ +.|++|+.+.++. .. ...
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~-----~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLA-----NDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLD 77 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHH-----HCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHH
Confidence 35899999999999999999999 7999998765321 10 000
Q ss_pred ----------CCCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeeccccc
Q 030483 54 ----------PTALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIF 107 (176)
Q Consensus 54 ----------~~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~ 107 (176)
..+.+ .+.++..+++|+.++..+++++...+. +-.+|+++||...+.
T Consensus 78 ~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~---~~g~iv~isS~~~~~---- 150 (252)
T PRK12747 78 NELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLR---DNSRIINISSAATRI---- 150 (252)
T ss_pred HHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhh---cCCeEEEECCccccc----
Confidence 00001 112355678999999999988776521 125899998865432
Q ss_pred CCCccCCCCCCCccccCCCCCCCCCcchHHHHHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 108 DPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 108 d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
+..+.. .+...+.+.+.+.+ + ...++++..+.|+.|.++.
T Consensus 151 -------------~~~~~~---~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~ 195 (252)
T PRK12747 151 -------------SLPDFI---AYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDM 195 (252)
T ss_pred -------------CCCCch---hHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCch
Confidence 110100 01111122222222 2 3568999999999998874
No 154
>PRK06198 short chain dehydrogenase; Provisional
Probab=98.92 E-value=3.5e-09 Score=83.35 Aligned_cols=134 Identities=13% Similarity=0.006 Sum_probs=82.3
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcE-EEEEecCCCCCC---------C-C-------------------
Q 030483 5 DQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAARRPPPGW---------F-P------------------- 54 (176)
Q Consensus 5 ~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~-V~~l~R~~~~~~---------~-~------------------- 54 (176)
+.+++++++||||+|+||++++++|. +.|++ |++++|+..... . .
T Consensus 2 ~~~~~k~vlItGa~g~iG~~la~~l~-----~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~ 76 (260)
T PRK06198 2 GRLDGKVALVTGGTQGLGAAIARAFA-----ERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVA 76 (260)
T ss_pred CCCCCcEEEEeCCCchHHHHHHHHHH-----HCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHH
Confidence 34567899999999999999999999 68999 999988643100 0 0
Q ss_pred --------CCcc-------------cCc---HHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCC
Q 030483 55 --------TALV-------------QES---EEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPS 110 (176)
Q Consensus 55 --------~~~v-------------~~~---~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~ 110 (176)
.+.+ ..+ ....+++|+.++.++++++...+.......+++++||...|++.
T Consensus 77 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~----- 151 (260)
T PRK06198 77 AADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQ----- 151 (260)
T ss_pred HHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCC-----
Confidence 0000 001 23467899999988888876541101112578888887665411
Q ss_pred ccCCCCCCCccccCCCCCCCCCcchHHHHHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 111 LAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 111 ~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
+ . ...+.......+.+.+ + ...+++++.++|++++++.
T Consensus 152 ----------~--~---~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~ 194 (260)
T PRK06198 152 ----------P--F---LAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEG 194 (260)
T ss_pred ----------C--C---cchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcc
Confidence 0 0 0001111122222222 1 3457999999999999875
No 155
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=98.92 E-value=4.3e-09 Score=82.26 Aligned_cols=88 Identities=16% Similarity=0.051 Sum_probs=59.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------C-CC---------------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------W-FP--------------------- 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~-~~--------------------- 54 (176)
+.++++|||||+|+||++++++|+ ..|++|+++.++.... . ..
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~-----~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~ 78 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALA-----QEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEA 78 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHH-----HcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH
Confidence 346899999999999999999999 6899998765532110 0 00
Q ss_pred ------CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccce
Q 030483 55 ------TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 100 (176)
Q Consensus 55 ------~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~ 100 (176)
.+.+ .+...+.+++|+.++.++++++...+. ..+..+++++||..
T Consensus 79 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~~sS~~ 145 (247)
T PRK12935 79 VNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYIT-EAEEGRIISISSII 145 (247)
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-HcCCcEEEEEcchh
Confidence 0001 123345689999999999888875311 01235789988753
No 156
>PRK09242 tropinone reductase; Provisional
Probab=98.92 E-value=3.9e-09 Score=83.14 Aligned_cols=133 Identities=12% Similarity=0.002 Sum_probs=82.3
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------C-CC--------C------------
Q 030483 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------W-FP--------T------------ 55 (176)
Q Consensus 6 ~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~-~~--------~------------ 55 (176)
++..|++|||||+|.||++++++|. +.|++|+.++|+.... . .. +
T Consensus 6 ~~~~k~~lItGa~~gIG~~~a~~l~-----~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 80 (257)
T PRK09242 6 RLDGQTALITGASKGIGLAIAREFL-----GLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILD 80 (257)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHH
Confidence 3456899999999999999999999 7999999998864210 0 00 0
Q ss_pred ---------Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCC
Q 030483 56 ---------ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPS 110 (176)
Q Consensus 56 ---------~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~ 110 (176)
+.+ .+++++.+++|+.++.++++++...+. ..+..+|+++||...+..
T Consensus 81 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~ii~~sS~~~~~~------ 153 (257)
T PRK09242 81 WVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLK-QHASSAIVNIGSVSGLTH------ 153 (257)
T ss_pred HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHH-hcCCceEEEECccccCCC------
Confidence 000 112345688999998888888754311 113468999988654321
Q ss_pred ccCCCCCCCccccCCCCCCCCCcchHHHHHHHH----h-hCCCceEEEeccCceEeCCC
Q 030483 111 LAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSA----S-YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 111 ~~g~~~~~~~p~~E~~~~~~~~~~y~~~e~~~~----~-~~~g~~~~ivRp~~v~G~~~ 164 (176)
..... .+.......+.+.+ + ...++++..++|+.+..+..
T Consensus 154 -----------~~~~~---~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~ 198 (257)
T PRK09242 154 -----------VRSGA---PYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLT 198 (257)
T ss_pred -----------CCCCc---chHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCccc
Confidence 00000 01111122222222 2 35689999999999988754
No 157
>PRK08267 short chain dehydrogenase; Provisional
Probab=98.91 E-value=7.5e-09 Score=81.64 Aligned_cols=35 Identities=17% Similarity=0.196 Sum_probs=32.0
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
|++|||||+|+||++++++|+ +.|++|++++|+..
T Consensus 2 k~vlItGasg~iG~~la~~l~-----~~G~~V~~~~r~~~ 36 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFA-----AEGWRVGAYDINEA 36 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHH-----HCCCeEEEEeCCHH
Confidence 689999999999999999999 78999999998654
No 158
>PRK12744 short chain dehydrogenase; Provisional
Probab=98.91 E-value=1.3e-08 Score=80.27 Aligned_cols=35 Identities=23% Similarity=0.108 Sum_probs=30.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
+++++|||||+|+||.+++++|+ +.|++|+.+.++
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~-----~~G~~vv~i~~~ 41 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLA-----AQGAKAVAIHYN 41 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHH-----HCCCcEEEEecC
Confidence 46899999999999999999999 789997777654
No 159
>PRK06057 short chain dehydrogenase; Provisional
Probab=98.91 E-value=3.5e-09 Score=83.43 Aligned_cols=38 Identities=26% Similarity=0.166 Sum_probs=34.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
+.++++|||||+|+||.+++++|+ +.|++|++++|+..
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~-----~~G~~v~~~~r~~~ 42 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLA-----AEGATVVVGDIDPE 42 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-----HcCCEEEEEeCCHH
Confidence 457899999999999999999999 68999999988743
No 160
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.91 E-value=9.1e-09 Score=81.02 Aligned_cols=37 Identities=32% Similarity=0.144 Sum_probs=32.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.+|++|||||+|+||++++++|. +.|++|+.+.|+.
T Consensus 5 l~~k~~lItGas~gIG~~~a~~l~-----~~G~~v~~~~~~~ 41 (255)
T PRK06463 5 FKGKVALITGGTRGIGRAIAEAFL-----REGAKVAVLYNSA 41 (255)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEeCCc
Confidence 356899999999999999999999 7999998876653
No 161
>PRK07576 short chain dehydrogenase; Provisional
Probab=98.90 E-value=4.2e-09 Score=83.63 Aligned_cols=43 Identities=21% Similarity=0.148 Sum_probs=36.2
Q ss_pred CCcCCCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 1 ~~~~~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|+-+-..+++++|||||+|+||++++++|+ ..|+.|++++|++
T Consensus 1 ~~~~~~~~~k~ilItGasggIG~~la~~l~-----~~G~~V~~~~r~~ 43 (264)
T PRK07576 1 MTTMFDFAGKNVVVVGGTSGINLGIAQAFA-----RAGANVAVASRSQ 43 (264)
T ss_pred CCccccCCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 444434456899999999999999999999 7999999999864
No 162
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=98.90 E-value=1.7e-08 Score=79.31 Aligned_cols=37 Identities=30% Similarity=0.329 Sum_probs=33.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
..++++|||||+|+||++++++|+ +.|++|+.++|+.
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~-----~~G~~v~~~~r~~ 45 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALA-----GAGAHVLVNGRNA 45 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-----HcCCeEEEEeCCH
Confidence 346899999999999999999999 7899999999874
No 163
>PRK06181 short chain dehydrogenase; Provisional
Probab=98.89 E-value=5.4e-09 Score=82.54 Aligned_cols=34 Identities=29% Similarity=0.256 Sum_probs=31.6
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+++|||||+|+||++++++|+ +.|++|++++|+.
T Consensus 2 ~~vlVtGasg~iG~~la~~l~-----~~g~~Vi~~~r~~ 35 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLA-----RAGAQLVLAARNE 35 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 589999999999999999999 7899999999874
No 164
>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]
Probab=98.89 E-value=2e-08 Score=85.49 Aligned_cols=86 Identities=21% Similarity=0.236 Sum_probs=59.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC--------CCCCC--------------c--------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------WFPTA--------------L-------- 57 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~--------------~-------- 57 (176)
.+|+|||||||||+|.-|++.|++..|. - -.++.+.|..... +...+ .
T Consensus 11 ~~k~i~vTG~tGFlgKVliEklLr~~p~-v-~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi 88 (467)
T KOG1221|consen 11 KNKTIFVTGATGFLGKVLIEKLLRTTPD-V-KRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDI 88 (467)
T ss_pred CCCeEEEEcccchhHHHHHHHHHhcCcC-c-ceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccc
Confidence 4689999999999999999999952111 1 2578787765431 10000 0
Q ss_pred ---------------------c---------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccc
Q 030483 58 ---------------------V---------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 99 (176)
Q Consensus 58 ---------------------v---------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~ 99 (176)
| .+.......+|+.||+++++.|++. .+++.++++|+.
T Consensus 89 ~~~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~----~~l~~~vhVSTA 156 (467)
T KOG1221|consen 89 SEPDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEM----VKLKALVHVSTA 156 (467)
T ss_pred cCcccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHh----hhhheEEEeehh
Confidence 0 1122345678999999999999997 478889999874
No 165
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.89 E-value=3.5e-09 Score=82.40 Aligned_cols=37 Identities=30% Similarity=0.221 Sum_probs=32.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEE-ecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGA-ARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l-~R~~ 48 (176)
.+++++|||||+|+||++|+++|+ +.|++|+.+ +|++
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~-----~~g~~v~~~~~r~~ 40 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLA-----KEGAKVVIAYDINE 40 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEcCCCH
Confidence 456899999999999999999999 689999988 7764
No 166
>PRK07063 short chain dehydrogenase; Provisional
Probab=98.89 E-value=1e-08 Score=80.89 Aligned_cols=37 Identities=24% Similarity=0.137 Sum_probs=33.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.+|++|||||+|+||++++++|+ +.|++|+.++|+.
T Consensus 5 l~~k~vlVtGas~gIG~~~a~~l~-----~~G~~vv~~~r~~ 41 (260)
T PRK07063 5 LAGKVALVTGAAQGIGAAIARAFA-----REGAAVALADLDA 41 (260)
T ss_pred cCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 456899999999999999999999 7999999999864
No 167
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.89 E-value=1.4e-08 Score=79.91 Aligned_cols=36 Identities=17% Similarity=0.190 Sum_probs=32.2
Q ss_pred CCCCeEEEEcCCh--HHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 7 NPKSVALIIGVTG--ISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 7 ~~~~~vLVtGatG--fiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
++++++|||||+| .||.+++++|+ +.|++|++++|+
T Consensus 3 l~~k~vlItGas~~~giG~~la~~l~-----~~G~~vi~~~r~ 40 (256)
T PRK12748 3 LMKKIALVTGASRLNGIGAAVCRRLA-----AKGIDIFFTYWS 40 (256)
T ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHH-----HcCCcEEEEcCC
Confidence 4568899999996 69999999999 789999999887
No 168
>PRK05866 short chain dehydrogenase; Provisional
Probab=98.89 E-value=9.5e-09 Score=83.09 Aligned_cols=36 Identities=25% Similarity=0.222 Sum_probs=32.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.++++|||||+|+||.+++++|+ ..|++|++++|+.
T Consensus 39 ~~k~vlItGasggIG~~la~~La-----~~G~~Vi~~~R~~ 74 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFA-----RRGATVVAVARRE 74 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEECCH
Confidence 35889999999999999999999 6899999999974
No 169
>PRK05855 short chain dehydrogenase; Validated
Probab=98.88 E-value=5.6e-09 Score=90.81 Aligned_cols=92 Identities=12% Similarity=0.004 Sum_probs=62.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----------CCC----------------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------WFP---------------------- 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~---------------------- 54 (176)
+..+++|||||+|+||++++++|. ++|++|+.++|+.... ...
T Consensus 313 ~~~~~~lv~G~s~giG~~~a~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~ 387 (582)
T PRK05855 313 FSGKLVVVTGAGSGIGRETALAFA-----REGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVR 387 (582)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 446789999999999999999999 7999999999874210 000
Q ss_pred -----CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeec
Q 030483 55 -----TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYM 103 (176)
Q Consensus 55 -----~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg 103 (176)
.+.+ .++....+++|+.++.++.+++...+.....-.+|+++||.+.|.
T Consensus 388 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~ 457 (582)
T PRK05855 388 AEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYA 457 (582)
T ss_pred HhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhcc
Confidence 0000 112345678999998888877654311011125899999977664
No 170
>PRK08226 short chain dehydrogenase; Provisional
Probab=98.87 E-value=2.1e-08 Score=79.18 Aligned_cols=37 Identities=19% Similarity=0.093 Sum_probs=33.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.++++|||||+|+||++++++|+ +.|++|+.++|+.
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~-----~~G~~Vv~~~r~~ 40 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFA-----RHGANLILLDISP 40 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEecCCH
Confidence 346899999999999999999999 7899999999874
No 171
>PRK12939 short chain dehydrogenase; Provisional
Probab=98.87 E-value=5.2e-09 Score=81.70 Aligned_cols=37 Identities=24% Similarity=0.132 Sum_probs=33.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.++++|||||+|+||++|+++|+ ++|++|++++|++.
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~-----~~G~~v~~~~r~~~ 42 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALA-----EAGATVAFNDGLAA 42 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHH-----HcCCEEEEEeCCHH
Confidence 35899999999999999999999 79999999988643
No 172
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=98.87 E-value=9.4e-09 Score=81.89 Aligned_cols=39 Identities=28% Similarity=0.294 Sum_probs=35.9
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 6 ~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
+++++++||||||+-||..++++|. ++|++|+.++|+..
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA-----~~g~~liLvaR~~~ 41 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLA-----RRGYNLILVARRED 41 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCcHH
Confidence 4667899999999999999999999 79999999999865
No 173
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=98.86 E-value=1.2e-08 Score=80.45 Aligned_cols=37 Identities=22% Similarity=0.181 Sum_probs=33.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.+|++|||||++.||++++++|+ +.|++|++++|+.
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~-----~~G~~vv~~~~~~ 42 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLA-----KAGADIVGVGVAE 42 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEecCch
Confidence 457899999999999999999999 7999999888754
No 174
>PRK08265 short chain dehydrogenase; Provisional
Probab=98.86 E-value=1.2e-08 Score=80.85 Aligned_cols=88 Identities=13% Similarity=0.014 Sum_probs=60.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------CC-C-------------------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------WF-P------------------------- 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~------------------------- 54 (176)
+.++++|||||+|.||++++++|+ +.|++|+.++|+.... .. .
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALV-----AAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARF 78 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHh
Confidence 456899999999999999999999 7999999999875320 00 0
Q ss_pred --CCcc---------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEecccee
Q 030483 55 --TALV---------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 101 (176)
Q Consensus 55 --~~~v---------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~ 101 (176)
.+.+ .+++.+.+++|+.++.++++++...+. .+-.+|+++||...
T Consensus 79 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~g~ii~isS~~~ 140 (261)
T PRK08265 79 GRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLA--RGGGAIVNFTSISA 140 (261)
T ss_pred CCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh--cCCcEEEEECchhh
Confidence 0000 112345678999998888887765421 12257888887543
No 175
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=98.85 E-value=4.9e-09 Score=81.71 Aligned_cols=33 Identities=33% Similarity=0.497 Sum_probs=30.9
Q ss_pred EEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 12 vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
|+|+||||.+|+++++.|+ ..+++|+++.|+..
T Consensus 1 I~V~GatG~~G~~v~~~L~-----~~~~~V~~l~R~~~ 33 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALL-----SAGFSVRALVRDPS 33 (233)
T ss_dssp EEEETTTSHHHHHHHHHHH-----HTTGCEEEEESSSH
T ss_pred CEEECCccHHHHHHHHHHH-----hCCCCcEEEEeccc
Confidence 7999999999999999999 69999999999863
No 176
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=98.85 E-value=7e-08 Score=72.50 Aligned_cols=126 Identities=13% Similarity=0.151 Sum_probs=78.6
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC--C--------------------CCcc-------cC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF--P--------------------TALV-------QE 60 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~--~--------------------~~~v-------~~ 60 (176)
|||-|+||||-+|++|+++++ .+||+|++++|++..... . .+.| +.
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~-----~RGHeVTAivRn~~K~~~~~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~ 75 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEAL-----KRGHEVTAIVRNASKLAARQGVTILQKDIFDLTSLASDLAGHDAVISAFGAGAS 75 (211)
T ss_pred CeEEEEecCchhHHHHHHHHH-----hCCCeeEEEEeChHhccccccceeecccccChhhhHhhhcCCceEEEeccCCCC
Confidence 589999999999999999999 799999999998764311 0 0111 22
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccc-eeecccccCCCccCCCCCCCccccCCCCCCCCCcchHHH-
Q 030483 61 SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT-KHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYEL- 138 (176)
Q Consensus 61 ~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~-~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~~- 138 (176)
+..+... .....+++.++.+ ++.|++.+.|. +.|..+ | ..-.|.| +.|..|+..
T Consensus 76 ~~~~~~~---k~~~~li~~l~~a-----gv~RllVVGGAGSL~id~-------g-------~rLvD~p--~fP~ey~~~A 131 (211)
T COG2910 76 DNDELHS---KSIEALIEALKGA-----GVPRLLVVGGAGSLEIDE-------G-------TRLVDTP--DFPAEYKPEA 131 (211)
T ss_pred ChhHHHH---HHHHHHHHHHhhc-----CCeeEEEEcCccceEEcC-------C-------ceeecCC--CCchhHHHHH
Confidence 3333322 2245688888776 57788777553 222110 1 1112233 245556542
Q ss_pred ---HHHHHh--hCCCceEEEeccCceEeCCC
Q 030483 139 ---EDVSAS--YSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 139 ---e~~~~~--~~~g~~~~ivRp~~v~G~~~ 164 (176)
-+.|.. .+.+++||.+=|+..|=|+.
T Consensus 132 ~~~ae~L~~Lr~~~~l~WTfvSPaa~f~PGe 162 (211)
T COG2910 132 LAQAEFLDSLRAEKSLDWTFVSPAAFFEPGE 162 (211)
T ss_pred HHHHHHHHHHhhccCcceEEeCcHHhcCCcc
Confidence 222222 35569999999999999876
No 177
>PRK06841 short chain dehydrogenase; Provisional
Probab=98.85 E-value=6.6e-09 Score=81.57 Aligned_cols=87 Identities=14% Similarity=0.009 Sum_probs=60.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------------C-C-C-------------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------------W-F-P------------------- 54 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------------~-~-~------------------- 54 (176)
.++++|||||+|+||++++++|+ ++|++|++++|+.... . . .
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~-----~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFA-----AKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFG 88 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 35899999999999999999999 7999999999874310 0 0 0
Q ss_pred -CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccce
Q 030483 55 -TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 100 (176)
Q Consensus 55 -~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~ 100 (176)
.+.+ .++..+.+++|+.++.++++++...+. ..+..+|+++||..
T Consensus 89 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~~sS~~ 150 (255)
T PRK06841 89 RIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMI-AAGGGKIVNLASQA 150 (255)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHH-hcCCceEEEEcchh
Confidence 0001 012244688999999999888765311 11246899988754
No 178
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.85 E-value=1.9e-08 Score=79.42 Aligned_cols=36 Identities=28% Similarity=0.390 Sum_probs=32.9
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
++|||||||||+|++++++|+ .+|++|++++|++..
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~-----~~~~~v~~~~r~~~~ 36 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELL-----ARGHEVRAAVRNPEA 36 (275)
T ss_pred CeEEEEecccchHHHHHHHHH-----hCCCEEEEEEeCHHH
Confidence 479999999999999999999 689999999998653
No 179
>PRK07904 short chain dehydrogenase; Provisional
Probab=98.85 E-value=6.8e-08 Score=76.36 Aligned_cols=36 Identities=28% Similarity=0.286 Sum_probs=31.9
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCC-CcEEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGS-PWKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~-g~~V~~l~R~~~ 49 (176)
.+++|||||+|+||.+++++|+ .. |++|++++|+..
T Consensus 8 ~~~vlItGas~giG~~la~~l~-----~~gg~~V~~~~r~~~ 44 (253)
T PRK07904 8 PQTILLLGGTSEIGLAICERYL-----KNAPARVVLAALPDD 44 (253)
T ss_pred CcEEEEEcCCcHHHHHHHHHHH-----hcCCCeEEEEeCCcc
Confidence 5789999999999999999999 45 599999999754
No 180
>PRK07035 short chain dehydrogenase; Provisional
Probab=98.85 E-value=7.8e-09 Score=81.11 Aligned_cols=37 Identities=22% Similarity=0.218 Sum_probs=33.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
++++++|||||+|+||.+++++|+ ..|++|++++|+.
T Consensus 6 l~~k~vlItGas~gIG~~l~~~l~-----~~G~~Vi~~~r~~ 42 (252)
T PRK07035 6 LTGKIALVTGASRGIGEAIAKLLA-----QQGAHVIVSSRKL 42 (252)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 456899999999999999999999 6899999999874
No 181
>PLN02253 xanthoxin dehydrogenase
Probab=98.85 E-value=3.3e-08 Score=78.88 Aligned_cols=36 Identities=22% Similarity=0.092 Sum_probs=32.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+|++|||||+|+||++++++|+ +.|++|++++|+.
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~-----~~G~~v~~~~~~~ 52 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFH-----KHGAKVCIVDLQD 52 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HcCCEEEEEeCCH
Confidence 46889999999999999999999 7999999998753
No 182
>PRK05650 short chain dehydrogenase; Provisional
Probab=98.84 E-value=9e-09 Score=81.78 Aligned_cols=34 Identities=18% Similarity=0.219 Sum_probs=31.2
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|++|||||+|+||++++++|+ ..|++|++++|+.
T Consensus 1 ~~vlVtGasggIG~~la~~l~-----~~g~~V~~~~r~~ 34 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWA-----REGWRLALADVNE 34 (270)
T ss_pred CEEEEecCCChHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 479999999999999999999 6899999998864
No 183
>PRK12937 short chain dehydrogenase; Provisional
Probab=98.83 E-value=3.4e-08 Score=76.91 Aligned_cols=35 Identities=20% Similarity=0.238 Sum_probs=31.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
+++++|||||+|+||++++++|+ +.|++|+.+.|+
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~-----~~g~~v~~~~~~ 38 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLA-----ADGFAVAVNYAG 38 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEecCC
Confidence 45799999999999999999999 799998877765
No 184
>PRK08339 short chain dehydrogenase; Provisional
Probab=98.83 E-value=1.3e-08 Score=80.92 Aligned_cols=42 Identities=21% Similarity=0.144 Sum_probs=36.8
Q ss_pred CCcCCCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 1 ~~~~~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|-+++ +.+|++|||||+|.||++++++|+ +.|++|++++|+.
T Consensus 1 ~~~~~-l~~k~~lItGas~gIG~aia~~l~-----~~G~~V~~~~r~~ 42 (263)
T PRK08339 1 MLKID-LSGKLAFTTASSKGIGFGVARVLA-----RAGADVILLSRNE 42 (263)
T ss_pred CCccC-CCCCEEEEeCCCCcHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 56665 567899999999999999999999 7999999999863
No 185
>PRK07109 short chain dehydrogenase; Provisional
Probab=98.82 E-value=1.5e-08 Score=83.52 Aligned_cols=37 Identities=27% Similarity=0.187 Sum_probs=33.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.++++|||||+|+||++++++|+ +.|++|++++|+.
T Consensus 6 l~~k~vlITGas~gIG~~la~~la-----~~G~~Vvl~~R~~ 42 (334)
T PRK07109 6 IGRQVVVITGASAGVGRATARAFA-----RRGAKVVLLARGE 42 (334)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEECCH
Confidence 456899999999999999999999 7999999999874
No 186
>PRK07832 short chain dehydrogenase; Provisional
Probab=98.82 E-value=1.4e-08 Score=80.87 Aligned_cols=34 Identities=15% Similarity=0.154 Sum_probs=31.1
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|+++||||+|+||.+++++|+ +.|++|+.++|+.
T Consensus 1 k~vlItGas~giG~~la~~la-----~~G~~vv~~~r~~ 34 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLA-----AQGAELFLTDRDA 34 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 479999999999999999999 6899999998864
No 187
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=98.82 E-value=4.3e-08 Score=76.54 Aligned_cols=34 Identities=24% Similarity=0.360 Sum_probs=29.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEec
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAAR 46 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R 46 (176)
.+|++|||||+|+||++++++|+ +.|++|+++.+
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~-----~~G~~vv~~~~ 35 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLH-----KDGFKVVAGCG 35 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHH-----HcCCEEEEEcC
Confidence 45789999999999999999999 78999887543
No 188
>PRK07023 short chain dehydrogenase; Provisional
Probab=98.82 E-value=2.6e-08 Score=77.78 Aligned_cols=35 Identities=31% Similarity=0.306 Sum_probs=31.7
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
+++|||||+|+||++++++|+ +.|++|++++|+..
T Consensus 2 ~~vlItGasggiG~~ia~~l~-----~~G~~v~~~~r~~~ 36 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLL-----QPGIAVLGVARSRH 36 (243)
T ss_pred ceEEEecCCcchHHHHHHHHH-----hCCCEEEEEecCcc
Confidence 489999999999999999999 68999999998743
No 189
>PRK08589 short chain dehydrogenase; Validated
Probab=98.82 E-value=1.3e-08 Score=81.08 Aligned_cols=36 Identities=25% Similarity=0.109 Sum_probs=33.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
+.+|++|||||+|+||++++++|+ +.|++|++++|+
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~-----~~G~~vi~~~r~ 39 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALA-----QEGAYVLAVDIA 39 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCc
Confidence 457899999999999999999999 799999999987
No 190
>PRK05854 short chain dehydrogenase; Provisional
Probab=98.82 E-value=2.2e-08 Score=81.65 Aligned_cols=37 Identities=24% Similarity=0.218 Sum_probs=33.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.+++++||||+++||.+++++|+ ..|++|+.++|+.
T Consensus 12 l~gk~~lITGas~GIG~~~a~~La-----~~G~~Vil~~R~~ 48 (313)
T PRK05854 12 LSGKRAVVTGASDGLGLGLARRLA-----AAGAEVILPVRNR 48 (313)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 356899999999999999999999 7999999999864
No 191
>PRK07069 short chain dehydrogenase; Validated
Probab=98.82 E-value=1.6e-08 Score=79.03 Aligned_cols=32 Identities=25% Similarity=0.269 Sum_probs=30.0
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
++|||||+|+||+++++.|+ ++|++|+.++|+
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~-----~~G~~v~~~~r~ 32 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMA-----EQGAKVFLTDIN 32 (251)
T ss_pred CEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCC
Confidence 48999999999999999999 689999999987
No 192
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=98.81 E-value=1.2e-08 Score=80.51 Aligned_cols=35 Identities=20% Similarity=0.111 Sum_probs=32.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
.++++|||||+|+||.+++++|+ +.|++|+.++|+
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~-----~~G~~v~~~~~~ 48 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALA-----KAGADIIITTHG 48 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCC
Confidence 46899999999999999999999 799999999886
No 193
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=98.81 E-value=1.5e-08 Score=79.22 Aligned_cols=34 Identities=24% Similarity=0.187 Sum_probs=29.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEec
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAAR 46 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R 46 (176)
|+|++|||||+|+||.++++.|+ +.|++|+.+.+
T Consensus 1 m~k~ilItGas~giG~~la~~l~-----~~g~~v~~~~~ 34 (248)
T PRK06947 1 MRKVVLITGASRGIGRATAVLAA-----ARGWSVGINYA 34 (248)
T ss_pred CCcEEEEeCCCCcHHHHHHHHHH-----HCCCEEEEEeC
Confidence 45789999999999999999999 68999877654
No 194
>PRK08278 short chain dehydrogenase; Provisional
Probab=98.80 E-value=6e-08 Score=77.38 Aligned_cols=37 Identities=19% Similarity=0.125 Sum_probs=33.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.++++|||||+|+||++++++|+ +.|++|++++|+.
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~-----~~G~~V~~~~r~~ 40 (273)
T PRK08278 4 LSGKTLFITGASRGIGLAIALRAA-----RDGANIVIAAKTA 40 (273)
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeccc
Confidence 345799999999999999999999 7899999999864
No 195
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=98.80 E-value=1.8e-08 Score=79.90 Aligned_cols=37 Identities=19% Similarity=0.120 Sum_probs=33.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.++++|||||+|+||++++++|+ +.|++|+.++|+.
T Consensus 8 ~~~k~~lItGa~~~iG~~ia~~l~-----~~G~~vv~~~~~~ 44 (265)
T PRK07097 8 LKGKIALITGASYGIGFAIAKAYA-----KAGATIVFNDINQ 44 (265)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-----HCCCeEEEEeCCH
Confidence 456899999999999999999999 7999999988865
No 196
>PRK07814 short chain dehydrogenase; Provisional
Probab=98.80 E-value=1.9e-08 Score=79.74 Aligned_cols=88 Identities=18% Similarity=0.039 Sum_probs=61.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------------CC--C---------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------------WF--P--------------- 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------------~~--~--------------- 54 (176)
+.++++|||||+|+||.+++++|+ ++|++|++++|+.... +. .
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~-----~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 82 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFA-----EAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAV 82 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 456899999999999999999999 7899999999875310 00 0
Q ss_pred -----CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccc
Q 030483 55 -----TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 99 (176)
Q Consensus 55 -----~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~ 99 (176)
.+.+ .++..+.+++|+.++.++++++...+....+..+++++||.
T Consensus 83 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~ 148 (263)
T PRK07814 83 EAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISST 148 (263)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccc
Confidence 0000 11234568899999999999987531100134678888874
No 197
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=98.80 E-value=1.3e-08 Score=79.14 Aligned_cols=37 Identities=24% Similarity=0.143 Sum_probs=32.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.++++|||||+|+||++++++|+ ++|+.|+...|+.
T Consensus 4 ~~~~~vlItGa~g~iG~~la~~l~-----~~g~~v~~~~~~~ 40 (245)
T PRK12936 4 LSGRKALVTGASGGIGEEIARLLH-----AQGAIVGLHGTRV 40 (245)
T ss_pred CCCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEcCCH
Confidence 346799999999999999999999 7899888877753
No 198
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=98.79 E-value=2.5e-08 Score=78.51 Aligned_cols=43 Identities=19% Similarity=0.101 Sum_probs=35.9
Q ss_pred CCcCCCC--CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 1 MEKQDQN--PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 1 ~~~~~~~--~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|...+++ .++++|||||+|+||++++++|. +.|++|+.++|+.
T Consensus 1 ~~~~~~~~l~~k~vlVtG~s~gIG~~la~~l~-----~~G~~vv~~~r~~ 45 (255)
T PRK06113 1 MFNSDNLRLDGKCAIITGAGAGIGKEIAITFA-----TAGASVVVSDINA 45 (255)
T ss_pred CCCccccCcCCCEEEEECCCchHHHHHHHHHH-----HCCCeEEEEeCCH
Confidence 4445444 36899999999999999999999 7899999888764
No 199
>PRK07478 short chain dehydrogenase; Provisional
Probab=98.79 E-value=2.2e-08 Score=78.68 Aligned_cols=36 Identities=31% Similarity=0.270 Sum_probs=33.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+++++|||||+|.||.+++++|+ +.|++|+.++|+.
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~-----~~G~~v~~~~r~~ 40 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFA-----REGAKVVVGARRQ 40 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 45799999999999999999999 7999999999864
No 200
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=98.79 E-value=5.1e-08 Score=76.80 Aligned_cols=131 Identities=9% Similarity=0.020 Sum_probs=79.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-------CC--------C--C--------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------WF--------P--T-------------- 55 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~~--------~--~-------------- 55 (176)
+.++++|||||+|.||++++++|+ +.|++|++++|..... .. + +
T Consensus 8 l~~k~~lItG~~~gIG~a~a~~l~-----~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 82 (253)
T PRK08993 8 LEGKVAVVTGCDTGLGQGMALGLA-----EAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAE 82 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 446899999999999999999999 7899999887653210 00 0 0
Q ss_pred ----Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCC
Q 030483 56 ----ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQL 115 (176)
Q Consensus 56 ----~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~ 115 (176)
+.+ .+++.+.+++|+.++.++++++...+.....-.+++++||...+...
T Consensus 83 ~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------- 152 (253)
T PRK08993 83 FGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGG---------- 152 (253)
T ss_pred hCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCC----------
Confidence 000 12345678999999988888876542101112478888886554311
Q ss_pred CCCCccccCCCCCCCCCcchHHHHHHHH----h-hCCCceEEEeccCceEeC
Q 030483 116 MPYEVPFKEDSSRLPFPNFYYELEDVSA----S-YSPAITYSVHRSSVIIGA 162 (176)
Q Consensus 116 ~~~~~p~~E~~~~~~~~~~y~~~e~~~~----~-~~~g~~~~ivRp~~v~G~ 162 (176)
+. .+ .+...+.+.+.+.+ + ...|+++..++|+.+--+
T Consensus 153 -----~~---~~--~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~ 194 (253)
T PRK08993 153 -----IR---VP--SYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATN 194 (253)
T ss_pred -----CC---Cc--chHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCc
Confidence 10 00 11112222222222 2 346899999999999654
No 201
>PRK08324 short chain dehydrogenase; Validated
Probab=98.79 E-value=1.8e-08 Score=90.31 Aligned_cols=37 Identities=27% Similarity=0.153 Sum_probs=33.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.++++|||||+|+||++++++|+ ..|++|++++|+.
T Consensus 420 l~gk~vLVTGasggIG~~la~~L~-----~~Ga~Vvl~~r~~ 456 (681)
T PRK08324 420 LAGKVALVTGAAGGIGKATAKRLA-----AEGACVVLADLDE 456 (681)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHH-----HCcCEEEEEeCCH
Confidence 356899999999999999999999 6899999999875
No 202
>PRK09134 short chain dehydrogenase; Provisional
Probab=98.77 E-value=6.5e-08 Score=76.28 Aligned_cols=35 Identities=23% Similarity=0.235 Sum_probs=31.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
++|++|||||+|+||++++++|+ +.|++|+.+.|+
T Consensus 8 ~~k~vlItGas~giG~~la~~l~-----~~g~~v~~~~~~ 42 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLA-----AHGFDVAVHYNR 42 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCC
Confidence 45789999999999999999999 799999887664
No 203
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=98.77 E-value=2.3e-08 Score=78.26 Aligned_cols=36 Identities=17% Similarity=0.062 Sum_probs=33.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
..+++|||||+|+||.+++++|+ +.|++|++++|+.
T Consensus 11 ~~k~vlItG~~g~iG~~la~~l~-----~~G~~Vi~~~r~~ 46 (247)
T PRK08945 11 KDRIILVTGAGDGIGREAALTYA-----RHGATVILLGRTE 46 (247)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-----HCCCcEEEEeCCH
Confidence 46899999999999999999999 6899999999874
No 204
>PRK06172 short chain dehydrogenase; Provisional
Probab=98.77 E-value=1.9e-08 Score=78.94 Aligned_cols=36 Identities=31% Similarity=0.193 Sum_probs=33.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
..+++|||||+|+||++++++|+ +.|++|++++|+.
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~-----~~G~~v~~~~r~~ 41 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFA-----REGAKVVVADRDA 41 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-----HcCCEEEEEeCCH
Confidence 46899999999999999999999 7899999999874
No 205
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.77 E-value=7.4e-08 Score=75.35 Aligned_cols=34 Identities=18% Similarity=0.165 Sum_probs=30.2
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
+|++|||||+|+||++++++|+ +.|++|+.+.|+
T Consensus 5 ~k~ilItGas~gIG~~la~~l~-----~~G~~vv~~~~~ 38 (253)
T PRK08642 5 EQTVLVTGGSRGLGAAIARAFA-----REGARVVVNYHQ 38 (253)
T ss_pred CCEEEEeCCCCcHHHHHHHHHH-----HCCCeEEEEcCC
Confidence 4789999999999999999999 799999876553
No 206
>PRK09072 short chain dehydrogenase; Provisional
Probab=98.75 E-value=8e-08 Score=75.96 Aligned_cols=36 Identities=28% Similarity=0.347 Sum_probs=33.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.++++|||||+|+||.+++++|+ ++|++|++++|+.
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~-----~~G~~V~~~~r~~ 39 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALA-----AAGARLLLVGRNA 39 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEECCH
Confidence 46789999999999999999999 7999999999875
No 207
>KOG4288 consensus Predicted oxidoreductase [General function prediction only]
Probab=98.75 E-value=1.3e-07 Score=73.32 Aligned_cols=36 Identities=17% Similarity=0.304 Sum_probs=32.1
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
++..+.||+||+|..+|+.+. ..||+|.-++|+...
T Consensus 3 ~k~~vfgg~gflg~~ic~~a~-----~sgy~vvsvsrsgas 38 (283)
T KOG4288|consen 3 PKLIVFGGNGFLGKRICQEAV-----TSGYQVVSVSRSGAS 38 (283)
T ss_pred ccceeecccccchhhhhHHHH-----hcCceEEEeccccCC
Confidence 578899999999999999999 689999999998654
No 208
>PRK05872 short chain dehydrogenase; Provisional
Probab=98.75 E-value=2.7e-08 Score=80.43 Aligned_cols=94 Identities=13% Similarity=0.007 Sum_probs=64.1
Q ss_pred CcCCCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------C----------CC-----------
Q 030483 2 EKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------W----------FP----------- 54 (176)
Q Consensus 2 ~~~~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~----------~~----------- 54 (176)
..+..+.++++|||||+|.||.+++++|. +.|++|+.++|+.... . .+
T Consensus 2 ~~~~~l~gk~vlItGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~ 76 (296)
T PRK05872 2 PPMTSLAGKVVVVTGAARGIGAELARRLH-----ARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAA 76 (296)
T ss_pred CCCCCCCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHH
Confidence 34444567899999999999999999999 7999999999864310 0 00
Q ss_pred ---------CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceee
Q 030483 55 ---------TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 102 (176)
Q Consensus 55 ---------~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~y 102 (176)
.+.+ .++.++.+++|+.++.++++++...+. .+..+|+++||...+
T Consensus 77 ~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~--~~~g~iv~isS~~~~ 147 (296)
T PRK05872 77 EEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALI--ERRGYVLQVSSLAAF 147 (296)
T ss_pred HHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH--HcCCEEEEEeCHhhc
Confidence 0000 112345688999999998888765411 112578888886543
No 209
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=98.75 E-value=4.3e-08 Score=78.15 Aligned_cols=36 Identities=31% Similarity=0.285 Sum_probs=32.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.++++|||||+|+||++++++|+ +.|++|++++|+.
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~-----~~G~~V~~~~r~~ 44 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELA-----RAGAKVAILDRNQ 44 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 46899999999999999999999 7999999999864
No 210
>PRK07677 short chain dehydrogenase; Provisional
Probab=98.74 E-value=3.4e-08 Score=77.63 Aligned_cols=35 Identities=20% Similarity=0.203 Sum_probs=32.0
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+|++|||||+|+||++++++|+ +.|+.|++++|+.
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~-----~~G~~Vi~~~r~~ 35 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFA-----EEGANVVITGRTK 35 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 3789999999999999999999 7999999998864
No 211
>PRK07062 short chain dehydrogenase; Provisional
Probab=98.74 E-value=4.8e-08 Score=77.27 Aligned_cols=37 Identities=24% Similarity=0.144 Sum_probs=33.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
++++++|||||+|+||++++++|+ +.|++|++++|+.
T Consensus 6 l~~k~~lItGas~giG~~ia~~l~-----~~G~~V~~~~r~~ 42 (265)
T PRK07062 6 LEGRVAVVTGGSSGIGLATVELLL-----EAGASVAICGRDE 42 (265)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHH-----HCCCeEEEEeCCH
Confidence 457899999999999999999999 7999999999875
No 212
>PRK07201 short chain dehydrogenase; Provisional
Probab=98.74 E-value=3.7e-08 Score=87.50 Aligned_cols=37 Identities=24% Similarity=0.160 Sum_probs=33.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.+|++|||||+|+||.+++++|+ ..|++|++++|++
T Consensus 369 ~~~k~vlItGas~giG~~la~~l~-----~~G~~V~~~~r~~ 405 (657)
T PRK07201 369 LVGKVVLITGASSGIGRATAIKVA-----EAGATVFLVARNG 405 (657)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCH
Confidence 446899999999999999999999 6899999999875
No 213
>PRK08177 short chain dehydrogenase; Provisional
Probab=98.73 E-value=1.2e-07 Score=73.29 Aligned_cols=35 Identities=37% Similarity=0.580 Sum_probs=32.4
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
++++||||+|+||++++++|+ ..|++|++++|++.
T Consensus 2 k~vlItG~sg~iG~~la~~l~-----~~G~~V~~~~r~~~ 36 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLL-----ERGWQVTATVRGPQ 36 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHH-----hCCCEEEEEeCCCc
Confidence 689999999999999999999 68999999999764
No 214
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=98.73 E-value=1.6e-07 Score=73.47 Aligned_cols=87 Identities=24% Similarity=0.126 Sum_probs=61.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------CC--C---------C---------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------WF--P---------T--------------- 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~--~---------~--------------- 55 (176)
.+|.++|||||+-||.+.+++|. +.||+|+...|+.... .. . +
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~-----~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~ 79 (246)
T COG4221 5 KGKVALITGASSGIGEATARALA-----EAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEF 79 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHH-----HCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhh
Confidence 35789999999999999999999 7999999999985421 11 0 0
Q ss_pred ---Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccce
Q 030483 56 ---ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 100 (176)
Q Consensus 56 ---~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~ 100 (176)
+.+ .++|+..+++|+.|+.+...++.-.+- ..+-.+|+.+||++
T Consensus 80 g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~-~r~~G~IiN~~SiA 142 (246)
T COG4221 80 GRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMV-ERKSGHIINLGSIA 142 (246)
T ss_pred CcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHH-hcCCceEEEecccc
Confidence 000 235677899999998777766554321 11335899888864
No 215
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=98.73 E-value=1e-07 Score=73.77 Aligned_cols=84 Identities=19% Similarity=0.124 Sum_probs=57.6
Q ss_pred EEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---C-------C-CC-------------------------
Q 030483 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---W-------F-PT------------------------- 55 (176)
Q Consensus 12 vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---~-------~-~~------------------------- 55 (176)
+||||++|+||++++++|+ ++||+|++++|+.... + . ..
T Consensus 1 vlItG~~g~iG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 75 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLA-----KEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELG 75 (239)
T ss_pred CEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 5899999999999999999 7899999998875210 0 0 00
Q ss_pred --Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEecccee
Q 030483 56 --ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 101 (176)
Q Consensus 56 --~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~ 101 (176)
+.+ .+.+++.+++|+.++.++++++..... ..+.++++++||...
T Consensus 76 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~~v~~sS~~~ 138 (239)
T TIGR01830 76 PIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMI-KQRSGRIINISSVVG 138 (239)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCeEEEEECCccc
Confidence 000 012345678999999999998876410 113468999988543
No 216
>PRK06953 short chain dehydrogenase; Provisional
Probab=98.72 E-value=2e-07 Score=71.93 Aligned_cols=129 Identities=13% Similarity=0.079 Sum_probs=77.9
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------C------C--------------CCCcc--
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------W------F--------------PTALV-- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~------~--------------~~~~v-- 58 (176)
+++|||||+|+||++++++|+ +.|++|++++|+.... . . ..+.+
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~ 76 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYR-----ADGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVY 76 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHH-----hCCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEE
Confidence 589999999999999999999 6899999999864320 0 0 00000
Q ss_pred ----c------------CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEecccee-ecccccCCCccCCCCCCCcc
Q 030483 59 ----Q------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH-YMGPIFDPSLAGQLMPYEVP 121 (176)
Q Consensus 59 ----~------------~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~-yg~~~~d~~~~g~~~~~~~p 121 (176)
. ++++..+++|+.++.++++++...+. . .-.+++++||... |+. .+
T Consensus 77 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~-~~g~iv~isS~~~~~~~---------------~~ 139 (222)
T PRK06953 77 VAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVE-A-AGGVLAVLSSRMGSIGD---------------AT 139 (222)
T ss_pred CCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhh-c-cCCeEEEEcCccccccc---------------cc
Confidence 0 12345789999999999999876421 1 1235777776432 221 01
Q ss_pred ccCCCCCCCCCcchHHHHHHHHh---hCCCceEEEeccCceEeCC
Q 030483 122 FKEDSSRLPFPNFYYELEDVSAS---YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 122 ~~E~~~~~~~~~~y~~~e~~~~~---~~~g~~~~ivRp~~v~G~~ 163 (176)
. .+..++.......+.+++. ...++++..++|+.+.-+.
T Consensus 140 ~---~~~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~ 181 (222)
T PRK06953 140 G---TTGWLYRASKAALNDALRAASLQARHATCIALHPGWVRTDM 181 (222)
T ss_pred C---CCccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCC
Confidence 0 0000111222223333333 2347889999999987654
No 217
>PRK06924 short chain dehydrogenase; Provisional
Probab=98.72 E-value=8.5e-08 Score=75.08 Aligned_cols=34 Identities=21% Similarity=0.202 Sum_probs=31.9
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|++|||||+|+||++++++|+ ++|++|++++|++
T Consensus 2 k~vlItGasggiG~~ia~~l~-----~~g~~V~~~~r~~ 35 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLL-----EKGTHVISISRTE 35 (251)
T ss_pred cEEEEecCCchHHHHHHHHHH-----hcCCEEEEEeCCc
Confidence 589999999999999999999 6899999999976
No 218
>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]
Probab=98.72 E-value=4.1e-08 Score=77.08 Aligned_cols=112 Identities=23% Similarity=0.269 Sum_probs=76.0
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC---------CCC---------------C------cc
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------FPT---------------A------LV 58 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~---------~~~---------------~------~v 58 (176)
.|..||||-||.-|+.|++.|+ .+||+|+++.|+....- ++. + ++
T Consensus 28 rkvALITGItGQDGSYLaEfLL-----~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I 102 (376)
T KOG1372|consen 28 RKVALITGITGQDGSYLAEFLL-----SKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLI 102 (376)
T ss_pred ceEEEEecccCCCchHHHHHHH-----hCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHH
Confidence 4578999999999999999999 79999999999865420 000 0 00
Q ss_pred --------------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCC
Q 030483 59 --------------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPY 118 (176)
Q Consensus 59 --------------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~ 118 (176)
.+-++...++...||.++|+|++... ...+| ++--+|++..||.. .
T Consensus 103 ~~ikPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~-l~~~V-rfYQAstSElyGkv------------~ 168 (376)
T KOG1372|consen 103 STIKPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACR-LTEKV-RFYQASTSELYGKV------------Q 168 (376)
T ss_pred hccCchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcC-cccce-eEEecccHhhcccc------------c
Confidence 22234455677889999999998761 01233 45567788888743 2
Q ss_pred CccccCCCCCCCCCcchHHHHHH
Q 030483 119 EVPFKEDSSRLPFPNFYYELEDV 141 (176)
Q Consensus 119 ~~p~~E~~~~~~~~~~y~~~e~~ 141 (176)
..|-+|..|.. |.+.|+..|.
T Consensus 169 e~PQsE~TPFy--PRSPYa~aKm 189 (376)
T KOG1372|consen 169 EIPQSETTPFY--PRSPYAAAKM 189 (376)
T ss_pred CCCcccCCCCC--CCChhHHhhh
Confidence 46788888764 4444554443
No 219
>PRK06483 dihydromonapterin reductase; Provisional
Probab=98.71 E-value=7.3e-08 Score=74.92 Aligned_cols=37 Identities=27% Similarity=0.116 Sum_probs=33.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
|+|++|||||+|+||++++++|+ +.|++|++++|+..
T Consensus 1 ~~k~vlItGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~ 37 (236)
T PRK06483 1 MPAPILITGAGQRIGLALAWHLL-----AQGQPVIVSYRTHY 37 (236)
T ss_pred CCceEEEECCCChHHHHHHHHHH-----HCCCeEEEEeCCch
Confidence 56799999999999999999999 79999999998753
No 220
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=98.71 E-value=6.1e-08 Score=76.57 Aligned_cols=37 Identities=22% Similarity=0.071 Sum_probs=32.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+..+++|||||+|.||++++++|+ +.|+.|+.+.|+.
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~-----~~G~~vvi~~~~~ 41 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFG-----KEKAKVVINYRSD 41 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEeCCC
Confidence 467899999999999999999999 7999988887753
No 221
>PRK06139 short chain dehydrogenase; Provisional
Probab=98.70 E-value=4.6e-08 Score=80.56 Aligned_cols=37 Identities=27% Similarity=0.209 Sum_probs=33.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.++++|||||+|.||++++++|+ +.|++|+.++|+.
T Consensus 5 l~~k~vlITGAs~GIG~aia~~la-----~~G~~Vvl~~R~~ 41 (330)
T PRK06139 5 LHGAVVVITGASSGIGQATAEAFA-----RRGARLVLAARDE 41 (330)
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHH-----HCCCEEEEEECCH
Confidence 446899999999999999999999 7999999999864
No 222
>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]
Probab=98.70 E-value=1.4e-07 Score=70.60 Aligned_cols=126 Identities=15% Similarity=0.195 Sum_probs=77.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCCCCCCCCCCcc----------------------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGWFPTALV---------------------------- 58 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~~~~~~~v---------------------------- 58 (176)
.++.++|.||||..|+.|++.+.+ ..-+ .|+++.|+..........+
T Consensus 17 q~~s~fvlGAtG~~G~~llk~~~E----~~~FSKV~~i~RR~~~d~at~k~v~q~~vDf~Kl~~~a~~~qg~dV~FcaLg 92 (238)
T KOG4039|consen 17 QNMSGFVLGATGLCGGGLLKHAQE----APQFSKVYAILRRELPDPATDKVVAQVEVDFSKLSQLATNEQGPDVLFCALG 92 (238)
T ss_pred hccceEEEeccccccHHHHHHHHh----cccceeEEEEEeccCCCccccceeeeEEechHHHHHHHhhhcCCceEEEeec
Confidence 357899999999999999999994 3334 5999999854322111110
Q ss_pred ----cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcc
Q 030483 59 ----QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNF 134 (176)
Q Consensus 59 ----~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~ 134 (176)
..-.+.++++.-.-...+.+++++. +|++|+++||..+- .++.. -++..
T Consensus 93 TTRgkaGadgfykvDhDyvl~~A~~AKe~-----Gck~fvLvSS~GAd---------------------~sSrF-lY~k~ 145 (238)
T KOG4039|consen 93 TTRGKAGADGFYKVDHDYVLQLAQAAKEK-----GCKTFVLVSSAGAD---------------------PSSRF-LYMKM 145 (238)
T ss_pred ccccccccCceEeechHHHHHHHHHHHhC-----CCeEEEEEeccCCC---------------------cccce-eeeec
Confidence 1111223445444455677777765 79999999985321 11111 12333
Q ss_pred hHHHHHHHHhhCCCc-eEEEeccCceEeCCCCC
Q 030483 135 YYELEDVSASYSPAI-TYSVHRSSVIIGASPRS 166 (176)
Q Consensus 135 y~~~e~~~~~~~~g~-~~~ivRp~~v~G~~~~~ 166 (176)
..+.|+-+.+ ..+ +++|+||+.+.|.+..+
T Consensus 146 KGEvE~~v~e--L~F~~~~i~RPG~ll~~R~es 176 (238)
T KOG4039|consen 146 KGEVERDVIE--LDFKHIIILRPGPLLGERTES 176 (238)
T ss_pred cchhhhhhhh--ccccEEEEecCcceecccccc
Confidence 3444554443 334 48999999999988744
No 223
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=98.70 E-value=2.1e-08 Score=80.15 Aligned_cols=120 Identities=15% Similarity=0.029 Sum_probs=78.8
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC-----------------C-CCC----------c-c---
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----------------F-PTA----------L-V--- 58 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-----------------~-~~~----------~-v--- 58 (176)
.+-|+|||||+|+.+|.+|. ..|-+|+.-.|.+.... + .++ . |
T Consensus 63 VaTVFGAtGFlGryvvnkla-----k~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINL 137 (391)
T KOG2865|consen 63 VATVFGATGFLGRYVVNKLA-----KMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINL 137 (391)
T ss_pred EEEEecccccccHHHHHHHh-----hcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHhCcEEEEe
Confidence 36689999999999999999 69999999888765310 0 010 0 0
Q ss_pred ----cCcH-HHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCc
Q 030483 59 ----QESE-EVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPN 133 (176)
Q Consensus 59 ----~~~~-~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~ 133 (176)
+++. =.+.++|+.+.+.+...|++. ++.+++.+|...+ -+.-.+. .-.
T Consensus 138 IGrd~eTknf~f~Dvn~~~aerlAricke~-----GVerfIhvS~Lga-------------------nv~s~Sr---~Lr 190 (391)
T KOG2865|consen 138 IGRDYETKNFSFEDVNVHIAERLARICKEA-----GVERFIHVSCLGA-------------------NVKSPSR---MLR 190 (391)
T ss_pred eccccccCCcccccccchHHHHHHHHHHhh-----Chhheeehhhccc-------------------cccChHH---HHH
Confidence 1111 125679999999999999988 7999998875311 0100000 112
Q ss_pred chHHHHHHHHhhCCCceEEEeccCceEeCCC
Q 030483 134 FYYELEDVSASYSPAITYSVHRSSVIIGASP 164 (176)
Q Consensus 134 ~y~~~e~~~~~~~~g~~~~ivRp~~v~G~~~ 164 (176)
+.+..|..+++ .=-+.+|+||+.|||...
T Consensus 191 sK~~gE~aVrd--afPeAtIirPa~iyG~eD 219 (391)
T KOG2865|consen 191 SKAAGEEAVRD--AFPEATIIRPADIYGTED 219 (391)
T ss_pred hhhhhHHHHHh--hCCcceeechhhhcccch
Confidence 23444555543 224589999999999875
No 224
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=98.70 E-value=5e-08 Score=76.46 Aligned_cols=34 Identities=29% Similarity=0.240 Sum_probs=31.2
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|++|||||+|+||.+|+++|+ +.|++|+.+.|+.
T Consensus 1 k~~lItG~sg~iG~~la~~l~-----~~G~~v~~~~r~~ 34 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLA-----KDGFAVAVADLNE 34 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 579999999999999999999 7999999998864
No 225
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=98.68 E-value=1.9e-07 Score=72.43 Aligned_cols=33 Identities=21% Similarity=0.343 Sum_probs=30.4
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
|++|||||+|+||++++++|+ ..|++|+++.|+
T Consensus 1 k~~lItG~sg~iG~~la~~l~-----~~G~~v~~~~r~ 33 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLA-----KDGYRVAANCGP 33 (242)
T ss_pred CEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCC
Confidence 579999999999999999999 799999998883
No 226
>PRK05867 short chain dehydrogenase; Provisional
Probab=98.66 E-value=5.4e-08 Score=76.53 Aligned_cols=37 Identities=30% Similarity=0.101 Sum_probs=33.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.+|++|||||+|+||++++++|+ +.|++|++++|+.
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~-----~~G~~V~~~~r~~ 43 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYV-----EAGAQVAIAARHL 43 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEcCCH
Confidence 456899999999999999999999 7999999998864
No 227
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=98.66 E-value=7.6e-08 Score=74.82 Aligned_cols=32 Identities=16% Similarity=0.225 Sum_probs=29.0
Q ss_pred EEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 12 vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+|||||+|+||.+++++|+ ++|++|+.++|+.
T Consensus 1 vlItGas~giG~~~a~~l~-----~~G~~v~~~~~~~ 32 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLA-----ADGFEICVHYHSG 32 (239)
T ss_pred CEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCC
Confidence 5899999999999999999 7999999888753
No 228
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.65 E-value=8e-08 Score=75.00 Aligned_cols=37 Identities=22% Similarity=0.056 Sum_probs=33.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.++++|||||+|+||.++++.|+ +.|+.|+.++|+.
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~-----~~G~~vi~~~r~~ 39 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLA-----QKGAKLALIDLNQ 39 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 456899999999999999999999 6899999998864
No 229
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=98.65 E-value=1.1e-07 Score=79.73 Aligned_cols=81 Identities=19% Similarity=0.233 Sum_probs=59.4
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC--CC----C--------Cc-----------------
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--FP----T--------AL----------------- 57 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~--~~----~--------~~----------------- 57 (176)
..+|||+||||.+|+-+++.|+ ++|+.|+++.|+..... .. + +.
T Consensus 79 ~~~VlVvGatG~vG~~iv~~ll-----krgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~ 153 (411)
T KOG1203|consen 79 PTTVLVVGATGKVGRRIVKILL-----KRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKG 153 (411)
T ss_pred CCeEEEecCCCchhHHHHHHHH-----HCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhcccc
Confidence 3589999999999999999999 79999999999754320 00 0 00
Q ss_pred ---c------cCcHH---HHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccc
Q 030483 58 ---V------QESEE---VNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 99 (176)
Q Consensus 58 ---v------~~~~~---~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~ 99 (176)
+ ....+ .-..+.-.++.|+++||+.+ +++|++++|+.
T Consensus 154 ~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~a-----Gvk~~vlv~si 202 (411)
T KOG1203|consen 154 VVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKA-----GVKRVVLVGSI 202 (411)
T ss_pred ceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHh-----CCceEEEEEee
Confidence 0 11111 12356778999999999887 79999999753
No 230
>PLN02780 ketoreductase/ oxidoreductase
Probab=98.62 E-value=1.1e-07 Score=77.97 Aligned_cols=35 Identities=31% Similarity=0.252 Sum_probs=32.4
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+++++||||||.||.+++++|+ ++|++|+.++|+.
T Consensus 53 g~~~lITGAs~GIG~alA~~La-----~~G~~Vil~~R~~ 87 (320)
T PLN02780 53 GSWALVTGPTDGIGKGFAFQLA-----RKGLNLVLVARNP 87 (320)
T ss_pred CCEEEEeCCCcHHHHHHHHHHH-----HCCCCEEEEECCH
Confidence 5789999999999999999999 7999999999864
No 231
>PRK07578 short chain dehydrogenase; Provisional
Probab=98.61 E-value=7.8e-07 Score=67.48 Aligned_cols=81 Identities=19% Similarity=0.117 Sum_probs=56.3
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----CC------------CCCcc---------------
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----WF------------PTALV--------------- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~~------------~~~~v--------------- 58 (176)
|++|||||+|.||.+++++|. ++ ++|++++|+.... .. +.+.+
T Consensus 1 ~~vlItGas~giG~~la~~l~-----~~-~~vi~~~r~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~ 74 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELS-----KR-HEVITAGRSSGDVQVDITDPASIRALFEKVGKVDAVVSAAGKVHFAPLAEM 74 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHH-----hc-CcEEEEecCCCceEecCCChHHHHHHHHhcCCCCEEEECCCCCCCCchhhC
Confidence 379999999999999999999 56 8999999865321 00 01111
Q ss_pred -cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccc
Q 030483 59 -QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 99 (176)
Q Consensus 59 -~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~ 99 (176)
.+++.+.+++|+.++.++++++...+. +-.+++++||.
T Consensus 75 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~g~iv~iss~ 113 (199)
T PRK07578 75 TDEDFNVGLQSKLMGQVNLVLIGQHYLN---DGGSFTLTSGI 113 (199)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCeEEEEccc
Confidence 113445688999999999988876421 22467877764
No 232
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=98.61 E-value=2.6e-07 Score=67.54 Aligned_cols=80 Identities=20% Similarity=0.061 Sum_probs=56.4
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCCCCCCC-------------C------C--------------
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGWF-------------P------T-------------- 55 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~~~-------------~------~-------------- 55 (176)
++++||||+|+||.+++++|+ +.|. .|+.++|+...... . +
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~-----~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 75 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLA-----ERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAI 75 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHH-----HhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH
Confidence 479999999999999999999 5775 68888886432110 0 0
Q ss_pred -------Ccc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccc
Q 030483 56 -------ALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 99 (176)
Q Consensus 56 -------~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~ 99 (176)
+.+ .++....+++|+.++.++++++... +.++++++||.
T Consensus 76 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~ii~~ss~ 137 (180)
T smart00822 76 PARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDL-----PLDFFVLFSSV 137 (180)
T ss_pred HHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccC-----CcceEEEEccH
Confidence 000 0123456889999999999998665 45678888774
No 233
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=98.61 E-value=2.4e-07 Score=75.64 Aligned_cols=36 Identities=33% Similarity=0.433 Sum_probs=32.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCC-cEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~ 48 (176)
|++++|||||++.||.+++++|+ ..| ++|+.++|+.
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~-----~~G~~~V~l~~r~~ 38 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALA-----ATGEWHVIMACRDF 38 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHH-----HcCCCEEEEEeCCH
Confidence 46799999999999999999999 689 9999998864
No 234
>PRK06484 short chain dehydrogenase; Validated
Probab=98.61 E-value=8.7e-08 Score=82.96 Aligned_cols=124 Identities=12% Similarity=-0.002 Sum_probs=80.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------C-CC---------C----------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------W-FP---------T---------------- 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~---------~---------------- 55 (176)
.+|++|||||+|.||.+++++|+ +.|++|+.++|+.... . .. +
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 342 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFA-----AAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWG 342 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcC
Confidence 36899999999999999999999 7999999999864210 0 00 0
Q ss_pred --Ccc------c-----------CcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCC
Q 030483 56 --ALV------Q-----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLM 116 (176)
Q Consensus 56 --~~v------~-----------~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~ 116 (176)
+.+ . +++++.+++|+.++.++++++...+ .+-.+|+++||...+.
T Consensus 343 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~---~~~g~iv~isS~~~~~------------- 406 (520)
T PRK06484 343 RLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLM---SQGGVIVNLGSIASLL------------- 406 (520)
T ss_pred CCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHh---ccCCEEEEECchhhcC-------------
Confidence 000 0 1234568999999999988887753 1235789998864431
Q ss_pred CCCccccCCCCCCCCCcchHH----HHHHHH----h-hCCCceEEEeccCceEeCC
Q 030483 117 PYEVPFKEDSSRLPFPNFYYE----LEDVSA----S-YSPAITYSVHRSSVIIGAS 163 (176)
Q Consensus 117 ~~~~p~~E~~~~~~~~~~y~~----~e~~~~----~-~~~g~~~~ivRp~~v~G~~ 163 (176)
+. + ....|.. .+.+.+ + ...|+++..++|+.|..+.
T Consensus 407 ----~~----~---~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 451 (520)
T PRK06484 407 ----AL----P---PRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPA 451 (520)
T ss_pred ----CC----C---CCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCch
Confidence 10 0 0112322 222222 2 3568999999999997764
No 235
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=98.58 E-value=4.1e-07 Score=71.93 Aligned_cols=37 Identities=14% Similarity=0.105 Sum_probs=33.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.++++|||||+|+||++++++|+ +.|++|++++|+.
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~-----~~G~~V~~~~r~~ 39 (262)
T TIGR03325 3 LKGEVVLVTGGASGLGRAIVDRFV-----AEGARVAVLDKSA 39 (262)
T ss_pred cCCcEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 346899999999999999999999 7999999999864
No 236
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=98.57 E-value=1.6e-07 Score=84.15 Aligned_cols=37 Identities=24% Similarity=0.140 Sum_probs=33.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.+|++|||||+|+||++++++|+ +.|++|++++|+.
T Consensus 412 l~gkvvLVTGasggIG~aiA~~La-----~~Ga~Vvi~~r~~ 448 (676)
T TIGR02632 412 LARRVAFVTGGAGGIGRETARRLA-----AEGAHVVLADLNL 448 (676)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-----hCCCEEEEEeCCH
Confidence 346899999999999999999999 7899999999864
No 237
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=98.55 E-value=1.9e-07 Score=73.86 Aligned_cols=37 Identities=27% Similarity=0.153 Sum_probs=33.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.++++|||||+|+||++++++|+ +.|++|+.++|+.
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~-----~~G~~V~~~~r~~ 40 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFL-----AEGARVAVLERSA 40 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 346899999999999999999999 7999999999864
No 238
>PRK07831 short chain dehydrogenase; Provisional
Probab=98.55 E-value=3e-07 Score=72.63 Aligned_cols=36 Identities=17% Similarity=0.069 Sum_probs=31.8
Q ss_pred CCCeEEEEcCCh-HHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTG-ISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatG-fiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.++++|||||+| -||++++++|+ +.|++|+.++|+.
T Consensus 16 ~~k~vlItG~sg~gIG~~ia~~l~-----~~G~~V~~~~~~~ 52 (262)
T PRK07831 16 AGKVVLVTAAAGTGIGSATARRAL-----EEGARVVISDIHE 52 (262)
T ss_pred CCCEEEEECCCcccHHHHHHHHHH-----HcCCEEEEEeCCH
Confidence 368999999998 59999999999 7999999988764
No 239
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=98.48 E-value=1e-06 Score=69.67 Aligned_cols=37 Identities=14% Similarity=-0.010 Sum_probs=32.7
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 6 ~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
.+.+|++|||||+++||++++++|+ +.|++|+.+.|+
T Consensus 5 ~l~~k~vlItGas~gIG~~ia~~l~-----~~G~~v~~~~~~ 41 (260)
T PRK08416 5 EMKGKTLVISGGTRGIGKAIVYEFA-----QSGVNIAFTYNS 41 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEcCC
Confidence 3567899999999999999999999 799999887664
No 240
>PRK07041 short chain dehydrogenase; Provisional
Probab=98.47 E-value=3.1e-07 Score=70.95 Aligned_cols=80 Identities=18% Similarity=0.072 Sum_probs=56.3
Q ss_pred EEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------CCC-----------------------CCcc--
Q 030483 13 LIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------WFP-----------------------TALV-- 58 (176)
Q Consensus 13 LVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~-----------------------~~~v-- 58 (176)
|||||+|+||++++++|+ +.|++|++++|+.... ... .+.+
T Consensus 1 lItGas~~iG~~~a~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~ 75 (230)
T PRK07041 1 LVVGGSSGIGLALARAFA-----AEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVI 75 (230)
T ss_pred CeecCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEE
Confidence 699999999999999999 7999999999863210 000 0000
Q ss_pred --------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceee
Q 030483 59 --------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 102 (176)
Q Consensus 59 --------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~y 102 (176)
.++.++.+++|+.++.++.++.... +..+|+++||...|
T Consensus 76 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~g~iv~~ss~~~~ 128 (230)
T PRK07041 76 TAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIA-----PGGSLTFVSGFAAV 128 (230)
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhc-----CCeEEEEECchhhc
Confidence 0123456889999999998854433 35789999886554
No 241
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.46 E-value=2.2e-06 Score=73.17 Aligned_cols=89 Identities=13% Similarity=0.037 Sum_probs=61.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC--------CC------C------------------
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------WF------P------------------ 54 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~~------~------------------ 54 (176)
..++++|||||+|.||.+++++|. +.|++|++++|..... .. +
T Consensus 208 ~~g~~vlItGasggIG~~la~~l~-----~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 282 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAIAEVLA-----RDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERH 282 (450)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHH-----HCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhC
Confidence 356899999999999999999999 7899999998743110 00 0
Q ss_pred --CCcc----------------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEecccee
Q 030483 55 --TALV----------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 101 (176)
Q Consensus 55 --~~~v----------------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~ 101 (176)
.+.+ .+.++..+++|+.++.++.+++..... ..+-.+|+++||...
T Consensus 283 g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~-~~~~g~iv~~SS~~~ 346 (450)
T PRK08261 283 GGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGA-LGDGGRIVGVSSISG 346 (450)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhh-hcCCCEEEEECChhh
Confidence 0001 112345688999999999999876300 112257888887543
No 242
>PRK12367 short chain dehydrogenase; Provisional
Probab=98.43 E-value=7.7e-07 Score=70.30 Aligned_cols=71 Identities=17% Similarity=0.118 Sum_probs=52.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------CC------C-------------CCcc----
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------WF------P-------------TALV---- 58 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~------~-------------~~~v---- 58 (176)
+++++|||||+|+||++++++|+ +.|++|++++|+.... .. + .+.+
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~-----~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnA 87 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFR-----AKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVLILNH 87 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHH-----HCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEECC
Confidence 46899999999999999999999 7999999999875110 00 0 0001
Q ss_pred ---------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 ---------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 ---------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
.+++.+.+++|+.++.++++++...
T Consensus 88 G~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 121 (245)
T PRK12367 88 GINPGGRQDPENINKALEINALSSWRLLELFEDI 121 (245)
T ss_pred ccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 1234567899999999988887664
No 243
>PRK06940 short chain dehydrogenase; Provisional
Probab=98.42 E-value=1.1e-06 Score=70.31 Aligned_cols=83 Identities=18% Similarity=0.030 Sum_probs=56.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------CC-CC----------------------
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------WF-PT---------------------- 55 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~~-~~---------------------- 55 (176)
|+|+++|||+ |+||++++++|. .|++|++++|+.... .. ..
T Consensus 1 ~~k~~lItGa-~gIG~~la~~l~------~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~ 73 (275)
T PRK06940 1 MKEVVVVIGA-GGIGQAIARRVG------AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQT 73 (275)
T ss_pred CCCEEEEECC-ChHHHHHHHHHh------CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHh
Confidence 6789999998 689999999997 589999999864210 00 00
Q ss_pred ----Ccc---------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccce
Q 030483 56 ----ALV---------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 100 (176)
Q Consensus 56 ----~~v---------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~ 100 (176)
+.+ ..++.+.+++|+.++.++++++...+. . + .+++++||..
T Consensus 74 ~g~id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~-~-~-g~iv~isS~~ 128 (275)
T PRK06940 74 LGPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIA-P-G-GAGVVIASQS 128 (275)
T ss_pred cCCCCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHh-h-C-CCEEEEEecc
Confidence 000 224567899999999999998876532 1 1 3445566543
No 244
>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]
Probab=98.40 E-value=1.5e-06 Score=67.56 Aligned_cols=143 Identities=15% Similarity=0.160 Sum_probs=88.9
Q ss_pred CCCeEEEEcCChHHHHHHHH-----HhhCCCCCCCCcEEEEEecCCCCC---CCC-----CC--c---c----------c
Q 030483 8 PKSVALIIGVTGISGLSLAE-----ALKNPTTPGSPWKVYGAARRPPPG---WFP-----TA--L---V----------Q 59 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~-----~L~~~~~~~~g~~V~~l~R~~~~~---~~~-----~~--~---v----------~ 59 (176)
+.++.++-+++|+|+..|.. ++-+ -...+.|+|+.++|++.+. |.+ .+ . + .
T Consensus 11 ~sr~a~~~~~~g~i~~nl~~~~~~~H~t~-~~~a~~h~vtv~sR~pg~~ritw~el~~~Gip~sc~a~vna~g~n~l~P~ 89 (315)
T KOG3019|consen 11 KSRDAVSNWSNGIIRENLGSETSCCHDTN-VHSADNHAVTVLSRSPGKARITWPELDFPGIPISCVAGVNAVGNNALLPI 89 (315)
T ss_pred ccccCCCCccccchhccccCcccccccCC-CCcccccceEEEecCCCCcccccchhcCCCCceehHHHHhhhhhhccCch
Confidence 45678899999999988877 3332 1223558999999998763 432 11 0 0 1
Q ss_pred CcHHHHHHHHH-----HHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcc
Q 030483 60 ESEEVNIFKNS-----TMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNF 134 (176)
Q Consensus 60 ~~~~~~~~~N~-----~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~ 134 (176)
..+...++.|+ ..|..+++++.++ ....+.+|++|++++|-.. ....|+|+++......+
T Consensus 90 rRWsp~fqkev~gSRi~~t~~la~aI~~a---Pq~~~~~Vlv~gva~y~pS------------~s~eY~e~~~~qgfd~~ 154 (315)
T KOG3019|consen 90 RRWSPEFQKEVKGSRIRVTSKLADAINNA---PQEARPTVLVSGVAVYVPS------------ESQEYSEKIVHQGFDIL 154 (315)
T ss_pred hhcCHHHHHHhhcceeeHHHHHHHHHhcC---CCCCCCeEEEEeeEEeccc------------cccccccccccCChHHH
Confidence 12333344443 3456788888887 4445688999999999632 24568888875422111
Q ss_pred hH---HHHHHHHhhCCCceEEEeccCceEeCCCCC
Q 030483 135 YY---ELEDVSASYSPAITYSVHRSSVIIGASPRS 166 (176)
Q Consensus 135 y~---~~e~~~~~~~~g~~~~ivRp~~v~G~~~~~ 166 (176)
-. ..|..........+.+++|.+.|.|-+.+.
T Consensus 155 srL~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa 189 (315)
T KOG3019|consen 155 SRLCLEWEGAALKANKDVRVALIRIGVVLGKGGGA 189 (315)
T ss_pred HHHHHHHHHHhhccCcceeEEEEEEeEEEecCCcc
Confidence 00 112211112445899999999999998754
No 245
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.40 E-value=4.6e-06 Score=65.79 Aligned_cols=34 Identities=18% Similarity=0.229 Sum_probs=29.9
Q ss_pred CCCCeEEEEcCCh--HHHHHHHHHhhCCCCCCCCcEEEEEe
Q 030483 7 NPKSVALIIGVTG--ISGLSLAEALKNPTTPGSPWKVYGAA 45 (176)
Q Consensus 7 ~~~~~vLVtGatG--fiG~~l~~~L~~~~~~~~g~~V~~l~ 45 (176)
..+|++|||||+| .||++++++|+ +.|++|+.+.
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~-----~~G~~vi~~~ 39 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELA-----EAGADIFFTY 39 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHH-----HCCCeEEEEe
Confidence 5578999999995 79999999999 7999988764
No 246
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=98.39 E-value=7.7e-07 Score=70.25 Aligned_cols=34 Identities=18% Similarity=0.136 Sum_probs=31.4
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|++|||||+|.||++++++|+ ++|++|+.++|+.
T Consensus 1 m~vlItGas~gIG~aia~~l~-----~~G~~V~~~~r~~ 34 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELL-----KKGARVVISSRNE 34 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHH-----HcCCEEEEEeCCH
Confidence 479999999999999999999 7999999999874
No 247
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=98.37 E-value=5.4e-06 Score=65.73 Aligned_cols=33 Identities=27% Similarity=0.313 Sum_probs=30.1
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
++++||||+|+||++++++|+ +.|++|+++.|+
T Consensus 2 ~~~lITGas~gIG~~~a~~l~-----~~G~~V~~~~~~ 34 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALH-----QEGYRVVLHYHR 34 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHH-----hCCCeEEEEcCC
Confidence 689999999999999999999 799999987654
No 248
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.36 E-value=3.1e-06 Score=68.79 Aligned_cols=35 Identities=20% Similarity=0.047 Sum_probs=31.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
.++++|||||+|+||++++++|+ +.|++|+..+|+
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~-----~~Ga~Vv~~~~~ 45 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLA-----RLGATVVVNDVA 45 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEecCC
Confidence 46899999999999999999999 789999988775
No 249
>PRK06125 short chain dehydrogenase; Provisional
Probab=98.35 E-value=1.1e-06 Score=69.21 Aligned_cols=37 Identities=24% Similarity=0.173 Sum_probs=33.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+..+++|||||+|.||.+++++|+ +.|++|++++|+.
T Consensus 5 ~~~k~vlItG~~~giG~~ia~~l~-----~~G~~V~~~~r~~ 41 (259)
T PRK06125 5 LAGKRVLITGASKGIGAAAAEAFA-----AEGCHLHLVARDA 41 (259)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-----HcCCEEEEEeCCH
Confidence 346899999999999999999999 6899999999864
No 250
>PRK06484 short chain dehydrogenase; Validated
Probab=98.35 E-value=1.2e-06 Score=76.00 Aligned_cols=37 Identities=22% Similarity=0.213 Sum_probs=33.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+|++|||||++.||.+++++|. +.|++|+.++|+..
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~-----~~G~~V~~~~r~~~ 40 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFA-----RAGDQVVVADRNVE 40 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCHH
Confidence 35799999999999999999999 79999999988643
No 251
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=98.35 E-value=1.5e-05 Score=61.72 Aligned_cols=34 Identities=24% Similarity=0.220 Sum_probs=27.6
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCC--CcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGS--PWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~--g~~V~~l~R~~ 48 (176)
|+++||||+|+||++++++|+ ++ ++.|....|..
T Consensus 1 ~~vlItGas~gIG~~ia~~l~-----~~~~~~~v~~~~~~~ 36 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLL-----ERYPDATVHATYRHH 36 (235)
T ss_pred CEEEEECCCChHHHHHHHHHH-----HhCCCCEEEEEccCC
Confidence 489999999999999999999 45 45666666643
No 252
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.33 E-value=3.2e-06 Score=66.91 Aligned_cols=43 Identities=12% Similarity=0.044 Sum_probs=36.8
Q ss_pred CCcCCCCCCCeEEEEcCC--hHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 1 MEKQDQNPKSVALIIGVT--GISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 1 ~~~~~~~~~~~vLVtGat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|+....+.+|++|||||+ +-||.+++++|+ +.|++|+..+|+.
T Consensus 2 ~~~~~~~~~k~~lItGas~g~GIG~a~a~~la-----~~G~~v~l~~r~~ 46 (258)
T PRK07533 2 MQPLLPLAGKRGLVVGIANEQSIAWGCARAFR-----ALGAELAVTYLND 46 (258)
T ss_pred CCcccccCCCEEEEECCCCCCcHHHHHHHHHH-----HcCCEEEEEeCCh
Confidence 666666678999999998 489999999999 7999998888864
No 253
>PRK07791 short chain dehydrogenase; Provisional
Probab=98.30 E-value=2.9e-06 Score=68.29 Aligned_cols=37 Identities=19% Similarity=0.077 Sum_probs=32.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.++++|||||++.||++++++|+ +.|++|+.++|+.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la-----~~G~~vii~~~~~ 40 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFA-----AEGARVVVNDIGV 40 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEeeCCc
Confidence 457899999999999999999999 7999998887754
No 254
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.25 E-value=4.4e-06 Score=65.86 Aligned_cols=36 Identities=17% Similarity=0.119 Sum_probs=32.2
Q ss_pred CCCCeEEEEcCC--hHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 7 NPKSVALIIGVT--GISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 7 ~~~~~vLVtGat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
+.+|++|||||+ +-||.+++++|+ +.|++|+..+|+
T Consensus 5 l~~k~~lItGas~~~gIG~a~a~~la-----~~G~~Vi~~~r~ 42 (252)
T PRK06079 5 LSGKKIVVMGVANKRSIAWGCAQAIK-----DQGATVIYTYQN 42 (252)
T ss_pred cCCCEEEEeCCCCCCchHHHHHHHHH-----HCCCEEEEecCc
Confidence 456899999999 789999999999 799999998876
No 255
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.23 E-value=2e-05 Score=63.00 Aligned_cols=36 Identities=17% Similarity=0.123 Sum_probs=31.8
Q ss_pred CCCCeEEEEcCCh--HHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 7 NPKSVALIIGVTG--ISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 7 ~~~~~vLVtGatG--fiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
+.+|++|||||++ -||++++++|+ +.|++|+..+|+
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la-----~~Ga~V~~~~r~ 42 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLA-----AQGAELAFTYQG 42 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHH-----hCCCEEEEecCc
Confidence 3468999999996 89999999999 799999988775
No 256
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.15 E-value=2e-05 Score=62.34 Aligned_cols=36 Identities=14% Similarity=0.095 Sum_probs=31.6
Q ss_pred CCCCeEEEEcCC--hHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 7 NPKSVALIIGVT--GISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 7 ~~~~~vLVtGat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
+.+|+++||||+ +-||.+++++|+ +.|++|+..+|+
T Consensus 5 ~~~k~~lItGa~~s~GIG~aia~~la-----~~G~~v~~~~r~ 42 (257)
T PRK08594 5 LEGKTYVVMGVANKRSIAWGIARSLH-----NAGAKLVFTYAG 42 (257)
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHH-----HCCCEEEEecCc
Confidence 456899999997 789999999999 799999988764
No 257
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.14 E-value=7.1e-06 Score=63.34 Aligned_cols=43 Identities=37% Similarity=0.509 Sum_probs=36.5
Q ss_pred CCcCCCCCCCeEEEEcC-ChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 1 MEKQDQNPKSVALIIGV-TGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 1 ~~~~~~~~~~~vLVtGa-tGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
||-|++. ++|||||+ +|-||.+|+++|. +.|+.|++.+|+-.+
T Consensus 1 ~e~~~~~--k~VlItgcs~GGIG~ala~ef~-----~~G~~V~AtaR~~e~ 44 (289)
T KOG1209|consen 1 SELQSQP--KKVLITGCSSGGIGYALAKEFA-----RNGYLVYATARRLEP 44 (289)
T ss_pred CCcccCC--CeEEEeecCCcchhHHHHHHHH-----hCCeEEEEEccccch
Confidence 5666654 68999887 7999999999999 799999999998654
No 258
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=98.09 E-value=1.7e-05 Score=62.77 Aligned_cols=35 Identities=14% Similarity=0.075 Sum_probs=30.1
Q ss_pred CCCCeEEEEcCC--hHHHHHHHHHhhCCCCCCCCcEEEEEec
Q 030483 7 NPKSVALIIGVT--GISGLSLAEALKNPTTPGSPWKVYGAAR 46 (176)
Q Consensus 7 ~~~~~vLVtGat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R 46 (176)
+++|++|||||+ +-||++++++|+ +.|++|+...|
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la-----~~G~~v~~~~~ 40 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLH-----AAGAELGITYL 40 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHH-----HCCCEEEEEec
Confidence 456899999986 789999999999 79999987754
No 259
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.08 E-value=3.7e-05 Score=61.92 Aligned_cols=37 Identities=32% Similarity=0.244 Sum_probs=31.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.+|.|+|||||.-||.+++.+|. .+|..++.+.|+.
T Consensus 10 ~~~kvVvITGASsGIG~~lA~~la-----~~G~~l~lvar~~ 46 (282)
T KOG1205|consen 10 LAGKVVLITGASSGIGEALAYELA-----KRGAKLVLVARRA 46 (282)
T ss_pred hCCCEEEEeCCCcHHHHHHHHHHH-----hCCCceEEeehhh
Confidence 457899999999999999999999 7999877776654
No 260
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.07 E-value=2.1e-05 Score=62.82 Aligned_cols=35 Identities=17% Similarity=0.152 Sum_probs=30.8
Q ss_pred CCCeEEEEcCC--hHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 8 PKSVALIIGVT--GISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 8 ~~~~vLVtGat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
.+|++|||||+ +-||.+++++|+ +.|++|+...|+
T Consensus 9 ~~k~~lItGas~~~GIG~aia~~la-----~~G~~V~l~~r~ 45 (272)
T PRK08159 9 AGKRGLILGVANNRSIAWGIAKACR-----AAGAELAFTYQG 45 (272)
T ss_pred cCCEEEEECCCCCCcHHHHHHHHHH-----HCCCEEEEEcCc
Confidence 45899999996 789999999999 799999887765
No 261
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.05 E-value=9.6e-05 Score=58.52 Aligned_cols=37 Identities=14% Similarity=0.102 Sum_probs=32.2
Q ss_pred CCCCCeEEEEcCCh--HHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 6 QNPKSVALIIGVTG--ISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 6 ~~~~~~vLVtGatG--fiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
.+.+|++|||||++ -||.+++++|. +.|++|+...|+
T Consensus 5 ~~~~k~~lITGas~~~GIG~a~a~~la-----~~G~~v~~~~r~ 43 (260)
T PRK06603 5 LLQGKKGLITGIANNMSISWAIAQLAK-----KHGAELWFTYQS 43 (260)
T ss_pred ccCCcEEEEECCCCCcchHHHHHHHHH-----HcCCEEEEEeCc
Confidence 35678999999996 79999999999 799999888775
No 262
>KOG2774 consensus NAD dependent epimerase [General function prediction only]
Probab=98.04 E-value=1.4e-05 Score=62.70 Aligned_cols=85 Identities=19% Similarity=0.174 Sum_probs=54.7
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEe--cCCCCC-CC-C---------------------CCcc-----
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAA--RRPPPG-WF-P---------------------TALV----- 58 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~--R~~~~~-~~-~---------------------~~~v----- 58 (176)
.++|||||+-|.+|..++..|.. .-|-+-+.++ +.++.. .. + .+++
T Consensus 44 ~PrvLITG~LGQLG~~~A~LLR~----~yGs~~VILSDI~KPp~~V~~~GPyIy~DILD~K~L~eIVVn~RIdWL~HfSA 119 (366)
T KOG2774|consen 44 APRVLITGSLGQLGRGLASLLRY----MYGSECVILSDIVKPPANVTDVGPYIYLDILDQKSLEEIVVNKRIDWLVHFSA 119 (366)
T ss_pred CCeEEEecchHHHhHHHHHHHHH----HhCCccEehhhccCCchhhcccCCchhhhhhccccHHHhhcccccceeeeHHH
Confidence 46899999999999999999884 4565544443 233321 00 0 0111
Q ss_pred ------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeec
Q 030483 59 ------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYM 103 (176)
Q Consensus 59 ------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg 103 (176)
..+-....++|++|.-|+++.+.++ +++ +..-|++.++|
T Consensus 120 LLSAvGE~NVpLA~~VNI~GvHNil~vAa~~-----kL~-iFVPSTIGAFG 164 (366)
T KOG2774|consen 120 LLSAVGETNVPLALQVNIRGVHNILQVAAKH-----KLK-VFVPSTIGAFG 164 (366)
T ss_pred HHHHhcccCCceeeeecchhhhHHHHHHHHc-----Cee-EeecccccccC
Confidence 1111234678999999999999998 555 44457776665
No 263
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.04 E-value=2.9e-05 Score=61.59 Aligned_cols=36 Identities=14% Similarity=-0.004 Sum_probs=30.9
Q ss_pred CCCCeEEEEcC--ChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 7 NPKSVALIIGV--TGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 7 ~~~~~vLVtGa--tGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
+.++++||||| ++-||.+++++|+ +.|++|+...|.
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~-----~~G~~v~~~~~~ 41 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACR-----EQGAELAFTYVV 41 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHH-----HCCCEEEEEcCc
Confidence 45689999997 6689999999999 799999887654
No 264
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.03 E-value=2.8e-05 Score=63.71 Aligned_cols=37 Identities=30% Similarity=0.200 Sum_probs=33.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
...++++|||||.-||...+++|. .+|..|+...|+.
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La-----~~Ga~Vv~~~R~~ 69 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELA-----LRGAHVVLACRNE 69 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHH-----hCCCEEEEEeCCH
Confidence 346799999999999999999999 7999999999986
No 265
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.02 E-value=3.7e-05 Score=61.22 Aligned_cols=36 Identities=14% Similarity=0.103 Sum_probs=31.6
Q ss_pred CCCCeEEEEcCCh--HHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 7 NPKSVALIIGVTG--ISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 7 ~~~~~vLVtGatG--fiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
+.+|++|||||++ -||++++++|+ +.|+.|+..+|+
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la-----~~G~~vil~~r~ 41 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMH-----REGAELAFTYQN 41 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHH-----HCCCEEEEEecc
Confidence 4568999999985 89999999999 799999888775
No 266
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.00 E-value=3.2e-05 Score=61.33 Aligned_cols=35 Identities=17% Similarity=0.027 Sum_probs=30.1
Q ss_pred CCCCeEEEEcC--ChHHHHHHHHHhhCCCCCCCCcEEEEEec
Q 030483 7 NPKSVALIIGV--TGISGLSLAEALKNPTTPGSPWKVYGAAR 46 (176)
Q Consensus 7 ~~~~~vLVtGa--tGfiG~~l~~~L~~~~~~~~g~~V~~l~R 46 (176)
+.+|++||||| ++-||.+++++|+ +.|++|+...|
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~-----~~G~~v~~~~~ 40 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACK-----REGAELAFTYV 40 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHH-----HCCCeEEEEcc
Confidence 45689999996 5789999999999 79999988754
No 267
>PRK05599 hypothetical protein; Provisional
Probab=97.95 E-value=5.4e-05 Score=59.42 Aligned_cols=33 Identities=36% Similarity=0.229 Sum_probs=29.7
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|++|||||++-||.+++++|. + |++|+.++|+.
T Consensus 1 ~~vlItGas~GIG~aia~~l~-----~-g~~Vil~~r~~ 33 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-----H-GEDVVLAARRP 33 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-----C-CCEEEEEeCCH
Confidence 579999999999999999998 4 89999999864
No 268
>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]
Probab=97.93 E-value=0.00015 Score=56.39 Aligned_cols=36 Identities=25% Similarity=0.248 Sum_probs=30.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
..+.++||||+--||-.|+++|++ ..|.++++-.|+
T Consensus 2 spksv~ItGaNRGIGlgLVk~llk----~~~i~~iiat~r 37 (249)
T KOG1611|consen 2 SPKSVFITGANRGIGLGLVKELLK----DKGIEVIIATAR 37 (249)
T ss_pred CCccEEEeccCcchhHHHHHHHhc----CCCcEEEEEecC
Confidence 345699999999999999999997 788887666655
No 269
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=97.93 E-value=1.2e-05 Score=58.92 Aligned_cols=34 Identities=29% Similarity=0.290 Sum_probs=29.6
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
|++|||||++-||.+++++|++ ..++.|+.+.|+
T Consensus 1 k~~lItGa~~giG~~~a~~l~~----~g~~~v~~~~r~ 34 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALAR----RGARVVILTSRS 34 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHH----TTTEEEEEEESS
T ss_pred CEEEEECCCCHHHHHHHHHHHh----cCceEEEEeeec
Confidence 5799999999999999999994 336788888888
No 270
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=97.83 E-value=2.9e-05 Score=65.85 Aligned_cols=71 Identities=14% Similarity=0.188 Sum_probs=52.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---------------CC-C-----------CCcc--
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------------WF-P-----------TALV-- 58 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------------~~-~-----------~~~v-- 58 (176)
++|+++||||+|+||++++++|. ++|++|++++|+.... ++ . .+.+
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La-----~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLIn 251 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELH-----QQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILII 251 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEE
Confidence 46899999999999999999999 7999999998864320 00 0 0111
Q ss_pred -----------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 -----------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 -----------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
.++..+.+++|+.++.++++++...
T Consensus 252 nAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~ 287 (406)
T PRK07424 252 NHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTT 287 (406)
T ss_pred CCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1123567899999999999887654
No 271
>PRK05884 short chain dehydrogenase; Provisional
Probab=97.79 E-value=3.1e-05 Score=60.05 Aligned_cols=33 Identities=24% Similarity=0.239 Sum_probs=30.6
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+++||||+|.||++++++|+ ++|++|+.++|+.
T Consensus 2 ~vlItGas~giG~~ia~~l~-----~~g~~v~~~~r~~ 34 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFR-----NDGHKVTLVGARR 34 (223)
T ss_pred eEEEEeCCchHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 69999999999999999999 7899999998864
No 272
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=97.75 E-value=5.9e-05 Score=56.82 Aligned_cols=33 Identities=30% Similarity=0.238 Sum_probs=27.9
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
++|||||+|-||..+++.|.+ .....|+.+.|+
T Consensus 2 tylitGG~gglg~~la~~La~----~~~~~~il~~r~ 34 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAE----RGARRLILLGRS 34 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHH----TT-SEEEEEESS
T ss_pred EEEEECCccHHHHHHHHHHHH----cCCCEEEEeccC
Confidence 689999999999999999994 334468999998
No 273
>PRK08309 short chain dehydrogenase; Provisional
Probab=97.73 E-value=4.6e-05 Score=57.46 Aligned_cols=33 Identities=33% Similarity=0.283 Sum_probs=29.5
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|+++|||||||+|. ++++|. +.||+|++++|++
T Consensus 1 m~vlVtGGtG~gg~-la~~L~-----~~G~~V~v~~R~~ 33 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLC-----EKGFHVSVIARRE 33 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHH-----HCcCEEEEEECCH
Confidence 47999999999886 999999 7999999999874
No 274
>PTZ00325 malate dehydrogenase; Provisional
Probab=97.71 E-value=0.00058 Score=56.23 Aligned_cols=87 Identities=15% Similarity=0.104 Sum_probs=61.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---C------C----C--C-----------Ccc--
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---W------F----P--T-----------ALV-- 58 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---~------~----~--~-----------~~v-- 58 (176)
..++||.|+|++|.||+.++..|.. ....+++..+++..... . . . + +.|
T Consensus 6 ~~~~KI~IiGaaG~VGs~~a~~l~~---~~~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVi 82 (321)
T PTZ00325 6 LKMFKVAVLGAAGGIGQPLSLLLKQ---NPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLI 82 (321)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhc---CCCCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEE
Confidence 3456899999999999999999882 12446788888743211 0 0 0 0 011
Q ss_pred --------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEecccee
Q 030483 59 --------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 101 (176)
Q Consensus 59 --------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~ 101 (176)
..++...+..|+.+++++++++.++ +++++++++|-.+
T Consensus 83 taG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~-----~~~~iviv~SNPv 128 (321)
T PTZ00325 83 CAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASS-----APKAIVGIVSNPV 128 (321)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-----CCCeEEEEecCcH
Confidence 1245678899999999999999998 5788998887654
No 275
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.71 E-value=0.00026 Score=57.14 Aligned_cols=37 Identities=16% Similarity=-0.010 Sum_probs=31.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.++.||||||++-+|+.++.+|+ ++|..+...+.+..
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa-----~rg~~~vl~Din~~ 73 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFA-----KRGAKLVLWDINKQ 73 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHH-----HhCCeEEEEecccc
Confidence 46789999999999999999999 68888877776654
No 276
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.67 E-value=0.00055 Score=56.46 Aligned_cols=74 Identities=15% Similarity=0.077 Sum_probs=51.0
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCC--CCCcEEEEEecCCCC----C----CC-------------CC--------Ccc
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTP--GSPWKVYGAARRPPP----G----WF-------------PT--------ALV 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~--~~g~~V~~l~R~~~~----~----~~-------------~~--------~~v 58 (176)
.+|+||||+|+||++++..|+...-. ..+++|+.+++.+.. . .. .. +.|
T Consensus 3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~~aDiV 82 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVATTDPEEAFKDVDVA 82 (325)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCceecCCHHHHhCCCCEE
Confidence 47999999999999999999831000 134689999985421 0 00 00 001
Q ss_pred ----------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 ----------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 ----------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
..+..+.++.|+...+.+.+.+.++
T Consensus 83 I~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~ 117 (325)
T cd01336 83 ILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKY 117 (325)
T ss_pred EEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 2245778899999999999999887
No 277
>PRK09620 hypothetical protein; Provisional
Probab=97.66 E-value=7.6e-05 Score=58.57 Aligned_cols=35 Identities=23% Similarity=0.074 Sum_probs=31.2
Q ss_pred CCCeEEEEcCC----------------hHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 8 PKSVALIIGVT----------------GISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 8 ~~~~vLVtGat----------------GfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
.+++||||+|. ||+|++|+++|+ ..|++|+.+++.
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~-----~~Ga~V~li~g~ 52 (229)
T PRK09620 2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELI-----SKGAHVIYLHGY 52 (229)
T ss_pred CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHH-----HCCCeEEEEeCC
Confidence 46899999885 999999999999 799999988764
No 278
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.63 E-value=0.00019 Score=55.23 Aligned_cols=38 Identities=24% Similarity=0.167 Sum_probs=34.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
+++.+||||||+.-||..|+++|+ +.|-+|+...|+..
T Consensus 3 ~tgnTiLITGG~sGIGl~lak~f~-----elgN~VIi~gR~e~ 40 (245)
T COG3967 3 TTGNTILITGGASGIGLALAKRFL-----ELGNTVIICGRNEE 40 (245)
T ss_pred ccCcEEEEeCCcchhhHHHHHHHH-----HhCCEEEEecCcHH
Confidence 346789999999999999999999 79999999999854
No 279
>PLN00015 protochlorophyllide reductase
Probab=97.63 E-value=4.6e-05 Score=61.95 Aligned_cols=31 Identities=35% Similarity=0.478 Sum_probs=28.2
Q ss_pred EEEcCChHHHHHHHHHhhCCCCCCCC-cEEEEEecCC
Q 030483 13 LIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRP 48 (176)
Q Consensus 13 LVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~ 48 (176)
|||||++.||.+++++|+ ..| +.|+..+|+.
T Consensus 1 lITGas~GIG~aia~~l~-----~~G~~~V~~~~r~~ 32 (308)
T PLN00015 1 IITGASSGLGLATAKALA-----ETGKWHVVMACRDF 32 (308)
T ss_pred CEeCCCChHHHHHHHHHH-----HCCCCEEEEEeCCH
Confidence 699999999999999999 689 9999998864
No 280
>PRK08303 short chain dehydrogenase; Provisional
Probab=97.61 E-value=0.00011 Score=59.95 Aligned_cols=37 Identities=30% Similarity=0.300 Sum_probs=33.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.+|++|||||++.||.+++++|+ ..|++|++++|+.
T Consensus 6 l~~k~~lITGgs~GIG~aia~~la-----~~G~~Vv~~~r~~ 42 (305)
T PRK08303 6 LRGKVALVAGATRGAGRGIAVELG-----AAGATVYVTGRST 42 (305)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeccc
Confidence 346899999999999999999999 7999999999863
No 281
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=97.54 E-value=0.0018 Score=52.70 Aligned_cols=33 Identities=24% Similarity=0.365 Sum_probs=29.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEe
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAA 45 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~ 45 (176)
..|.|||||+..-.|+.|+++|. +.|+.|++-.
T Consensus 28 ~~k~VlITGCDSGfG~~LA~~L~-----~~Gf~V~Agc 60 (322)
T KOG1610|consen 28 SDKAVLITGCDSGFGRLLAKKLD-----KKGFRVFAGC 60 (322)
T ss_pred CCcEEEEecCCcHHHHHHHHHHH-----hcCCEEEEEe
Confidence 46789999998889999999999 7999999865
No 282
>PRK06720 hypothetical protein; Provisional
Probab=97.53 E-value=0.00016 Score=54.14 Aligned_cols=37 Identities=22% Similarity=0.013 Sum_probs=33.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+++++||||+|.||+++++.|. +.|++|+.++|+..
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~-----~~G~~V~l~~r~~~ 51 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLA-----KQGAKVIVTDIDQE 51 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHH-----HCCCEEEEEECCHH
Confidence 46889999999999999999999 78999999988753
No 283
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=97.48 E-value=0.00056 Score=54.96 Aligned_cols=37 Identities=27% Similarity=0.194 Sum_probs=34.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+|.+|||||+.-||.++|.+|. ..|.+|+..+|+..
T Consensus 7 ~gkvalVTG~s~GIG~aia~~la-----~~Ga~v~i~~r~~~ 43 (270)
T KOG0725|consen 7 AGKVALVTGGSSGIGKAIALLLA-----KAGAKVVITGRSEE 43 (270)
T ss_pred CCcEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHH
Confidence 57899999999999999999999 79999999999754
No 284
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.33 E-value=0.00036 Score=55.12 Aligned_cols=37 Identities=14% Similarity=0.026 Sum_probs=32.4
Q ss_pred CCCCeEEEEcC--ChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGV--TGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGa--tGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.+|+++|||| ++-||.+++++|+ +.|++|+.++|+.
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la-----~~G~~v~l~~r~~ 43 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQ-----EQGAEVVLTGFGR 43 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHH-----HCCCEEEEecCcc
Confidence 44689999999 8899999999999 7999999988753
No 285
>PRK14982 acyl-ACP reductase; Provisional
Probab=97.32 E-value=0.00032 Score=58.07 Aligned_cols=38 Identities=21% Similarity=0.249 Sum_probs=30.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCC-cEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~ 48 (176)
..+++|+||||+|+||++++++|.. ..| .+++.+.|+.
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~----~~gv~~lilv~R~~ 191 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDA----KTGVAELLLVARQQ 191 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHh----hCCCCEEEEEcCCH
Confidence 3568999999999999999999982 234 5788888864
No 286
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=97.31 E-value=0.0032 Score=64.00 Aligned_cols=36 Identities=19% Similarity=0.078 Sum_probs=31.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
.++++|||||++-||..++++|.+ ..|++|+.++|+
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~----~~ga~viL~gRs 2031 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAK----QCQAHFILAGRS 2031 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHH----hcCCEEEEEeCC
Confidence 357899999999999999999994 347899999998
No 287
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=97.31 E-value=0.00034 Score=54.89 Aligned_cols=28 Identities=21% Similarity=0.187 Sum_probs=24.9
Q ss_pred cCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 16 GVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 16 GatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+|||+|++|+++|+ .+||+|+++.|..
T Consensus 23 ~SSG~iG~aLA~~L~-----~~G~~V~li~r~~ 50 (229)
T PRK06732 23 HSTGQLGKIIAETFL-----AAGHEVTLVTTKT 50 (229)
T ss_pred ccchHHHHHHHHHHH-----hCCCEEEEEECcc
Confidence 459999999999999 7999999998754
No 288
>PRK08862 short chain dehydrogenase; Provisional
Probab=97.29 E-value=0.00035 Score=54.37 Aligned_cols=38 Identities=11% Similarity=0.065 Sum_probs=33.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
++++++|||||++-||++++++|. +.|++|+.++|+..
T Consensus 3 ~~~k~~lVtGas~GIG~aia~~la-----~~G~~V~~~~r~~~ 40 (227)
T PRK08862 3 IKSSIILITSAGSVLGRTISCHFA-----RLGATLILCDQDQS 40 (227)
T ss_pred CCCeEEEEECCccHHHHHHHHHHH-----HCCCEEEEEcCCHH
Confidence 356899999999999999999999 79999999988653
No 289
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=97.27 E-value=0.00046 Score=53.82 Aligned_cols=37 Identities=35% Similarity=0.347 Sum_probs=32.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
++++++|||||++-||.+++++|. ..|+.|+.+.|+.
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~-----~~G~~v~~~~~~~ 39 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALA-----REGARVVVAARRS 39 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHH-----HCCCeEEEEcCCC
Confidence 356899999999999999999999 7999988887764
No 290
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.25 E-value=0.0014 Score=53.43 Aligned_cols=36 Identities=31% Similarity=0.182 Sum_probs=32.8
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.++++||||+--||-.|+.++. ..|.+|+.+.|+..
T Consensus 33 ~~hi~itggS~glgl~la~e~~-----~~ga~Vti~ar~~~ 68 (331)
T KOG1210|consen 33 RRHILITGGSSGLGLALALECK-----REGADVTITARSGK 68 (331)
T ss_pred cceEEEecCcchhhHHHHHHHH-----HccCceEEEeccHH
Confidence 3689999999999999999999 79999999999754
No 291
>PLN00106 malate dehydrogenase
Probab=97.23 E-value=0.0038 Score=51.49 Aligned_cols=83 Identities=13% Similarity=0.046 Sum_probs=58.5
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC---C------C-------CC----------Ccc----
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---W------F-------PT----------ALV---- 58 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---~------~-------~~----------~~v---- 58 (176)
++||.|+|++|.||++++..|.. .....+++.+++..... . . .. +.|
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~---~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitA 94 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKM---NPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPA 94 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHh---CCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeC
Confidence 46899999999999999999982 02223788888755211 0 0 00 111
Q ss_pred ------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccc
Q 030483 59 ------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 99 (176)
Q Consensus 59 ------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~ 99 (176)
..+..+.+..|...+.++++.+.++ .+..+++++|-
T Consensus 95 G~~~~~g~~R~dll~~N~~i~~~i~~~i~~~-----~p~aivivvSN 136 (323)
T PLN00106 95 GVPRKPGMTRDDLFNINAGIVKTLCEAVAKH-----CPNALVNIISN 136 (323)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-----CCCeEEEEeCC
Confidence 1256778899999999999999998 35677777664
No 292
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.20 E-value=0.00053 Score=54.90 Aligned_cols=36 Identities=17% Similarity=0.032 Sum_probs=31.7
Q ss_pred CCCCeEEEEcCC--hHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 7 NPKSVALIIGVT--GISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 7 ~~~~~vLVtGat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
+.+|++|||||+ +-||.+++++|+ +.|++|+..+|+
T Consensus 3 l~~k~~lItGas~~~GIG~aiA~~la-----~~G~~Vil~~r~ 40 (274)
T PRK08415 3 MKGKKGLIVGVANNKSIAYGIAKACF-----EQGAELAFTYLN 40 (274)
T ss_pred cCCcEEEEECCCCCCCHHHHHHHHHH-----HCCCEEEEEecC
Confidence 346899999997 689999999999 799999988876
No 293
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=97.18 E-value=0.001 Score=50.95 Aligned_cols=37 Identities=22% Similarity=0.122 Sum_probs=32.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
+.+.++||||+.-||+++++.|. ..|+.|...+++..
T Consensus 13 ~sk~~~vtGg~sGIGrAia~~la-----~~Garv~v~dl~~~ 49 (256)
T KOG1200|consen 13 MSKVAAVTGGSSGIGRAIAQLLA-----KKGARVAVADLDSA 49 (256)
T ss_pred hcceeEEecCCchHHHHHHHHHH-----hcCcEEEEeecchh
Confidence 45789999999999999999999 79999988877643
No 294
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=97.08 E-value=0.001 Score=55.37 Aligned_cols=37 Identities=27% Similarity=0.277 Sum_probs=30.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
||+++|+|+||||++|+.|++.|++ ....+++++.++
T Consensus 1 ~~~~~V~I~GatG~iG~~l~~~L~~----~p~~el~~~~~s 37 (349)
T PRK08664 1 MMKLKVGILGATGMVGQRFVQLLAN----HPWFEVTALAAS 37 (349)
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHc----CCCceEEEEEcC
Confidence 5668999999999999999999994 344588887444
No 295
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=97.08 E-value=0.00099 Score=50.58 Aligned_cols=36 Identities=25% Similarity=0.197 Sum_probs=32.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
..++++|+||+|.+|+.+++.|. ..|++|+.++|+.
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~-----~~g~~V~l~~R~~ 62 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLA-----REGARVVLVGRDL 62 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEcCCH
Confidence 46799999999999999999999 6889999998864
No 296
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=97.03 E-value=0.0008 Score=52.92 Aligned_cols=33 Identities=24% Similarity=0.239 Sum_probs=29.5
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCC----CCcEEEEEecCC
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPG----SPWKVYGAARRP 48 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~----~g~~V~~l~R~~ 48 (176)
.+|||||++.||.+++++|. + .|++|+.++|+.
T Consensus 2 ~vlItGas~GIG~~~a~~la-----~~~~~~g~~V~~~~r~~ 38 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELA-----KCLKSPGSVLVLSARND 38 (256)
T ss_pred EEEEecCCCchHHHHHHHHH-----HhhccCCcEEEEEEcCH
Confidence 58999999999999999998 4 699999998863
No 297
>PRK05086 malate dehydrogenase; Provisional
Probab=97.02 E-value=0.0073 Score=49.55 Aligned_cols=83 Identities=14% Similarity=0.061 Sum_probs=56.5
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC-------C-C---------CCC---------cc-----
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------W-F---------PTA---------LV----- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~---------~~~---------~v----- 58 (176)
||++|+||+|.||++++..|... ...++++..++|.+... . . ..+ .|
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~--~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~~~~~d~~~~l~~~DiVIitaG 78 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQ--LPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDPTPALEGADVVLISAG 78 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcC--CCCccEEEEEecCCCCcceehhhhcCCCCceEEEeCCCCHHHHcCCCCEEEEcCC
Confidence 58999999999999999888520 03456788888754320 0 0 001 01
Q ss_pred -----cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccc
Q 030483 59 -----QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 99 (176)
Q Consensus 59 -----~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~ 99 (176)
..+....+..|...+.++++++.++ .+++++.+.|-
T Consensus 79 ~~~~~~~~R~dll~~N~~i~~~ii~~i~~~-----~~~~ivivvsN 119 (312)
T PRK05086 79 VARKPGMDRSDLFNVNAGIVKNLVEKVAKT-----CPKACIGIITN 119 (312)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-----CCCeEEEEccC
Confidence 1134567889999999999999998 45677776653
No 298
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=97.00 E-value=0.0011 Score=56.16 Aligned_cols=37 Identities=22% Similarity=0.071 Sum_probs=33.8
Q ss_pred CCCCeEEEEcC----------------ChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGV----------------TGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGa----------------tGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.++++||||| +|.+|.+++++|. ..|++|+.+++..
T Consensus 186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~-----~~Ga~V~~v~~~~ 238 (399)
T PRK05579 186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAA-----RRGADVTLVSGPV 238 (399)
T ss_pred cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHH-----HCCCEEEEeCCCc
Confidence 56789999999 9999999999999 7999999998764
No 299
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=96.94 E-value=0.0011 Score=52.81 Aligned_cols=34 Identities=15% Similarity=0.133 Sum_probs=30.8
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
|+|||+||||. |+.|+++|. +.||+|++..|...
T Consensus 1 m~ILvlGGT~e-gr~la~~L~-----~~g~~v~~s~~t~~ 34 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLI-----AQGIEILVTVTTSE 34 (256)
T ss_pred CeEEEEechHH-HHHHHHHHH-----hCCCeEEEEEccCC
Confidence 47999999999 999999999 68999999988764
No 300
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=96.93 E-value=0.0063 Score=47.64 Aligned_cols=35 Identities=29% Similarity=0.236 Sum_probs=30.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
++|+++|||+.|-||+.++++|+ .+|..+.++.-+
T Consensus 4 tGKna~vtggagGIGl~~sk~Ll-----~kgik~~~i~~~ 38 (261)
T KOG4169|consen 4 TGKNALVTGGAGGIGLATSKALL-----EKGIKVLVIDDS 38 (261)
T ss_pred cCceEEEecCCchhhHHHHHHHH-----HcCchheeehhh
Confidence 47899999999999999999999 799887776544
No 301
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=96.88 E-value=0.0019 Score=45.45 Aligned_cols=33 Identities=21% Similarity=0.325 Sum_probs=26.6
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
||.|.||||++|+.|++.|.+ ...+++..+..+
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~----hp~~e~~~~~~~ 33 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAE----HPDFELVALVSS 33 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHH----TSTEEEEEEEES
T ss_pred CEEEECCCCHHHHHHHHHHhc----CCCccEEEeeee
Confidence 689999999999999999995 566776555443
No 302
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=96.88 E-value=0.0058 Score=47.71 Aligned_cols=71 Identities=15% Similarity=0.026 Sum_probs=49.1
Q ss_pred HHHHhhCCCCCCCCcEEEEEecCCCCCC-----C-C-----------------CCcc--------cCcHHHHHHHHHHHH
Q 030483 25 LAEALKNPTTPGSPWKVYGAARRPPPGW-----F-P-----------------TALV--------QESEEVNIFKNSTML 73 (176)
Q Consensus 25 l~~~L~~~~~~~~g~~V~~l~R~~~~~~-----~-~-----------------~~~v--------~~~~~~~~~~N~~~t 73 (176)
++++|+ +.|++|++++|+..... . + .+.+ ..+.+..+++|+.++
T Consensus 1 ~a~~l~-----~~G~~Vv~~~r~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~~~~~~vN~~~~ 75 (241)
T PRK12428 1 TARLLR-----FLGARVIGVDRREPGMTLDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPVELVARVNFLGL 75 (241)
T ss_pred ChHHHH-----hCCCEEEEEeCCcchhhhhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCHHHhhhhchHHH
Confidence 467888 69999999999754310 0 0 0111 234667889999999
Q ss_pred HHHHHHHHhcCCCCCCccEEEEeccceeec
Q 030483 74 KNVLSVLVSSNSGRSRLRHVALLTGTKHYM 103 (176)
Q Consensus 74 ~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg 103 (176)
.++++++...+. +-.+|+++||...|+
T Consensus 76 ~~l~~~~~~~~~---~~g~Iv~isS~~~~~ 102 (241)
T PRK12428 76 RHLTEALLPRMA---PGGAIVNVASLAGAE 102 (241)
T ss_pred HHHHHHHHHhcc---CCcEEEEeCcHHhhc
Confidence 999999876521 125899999988775
No 303
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.67 E-value=0.01 Score=48.97 Aligned_cols=69 Identities=10% Similarity=-0.057 Sum_probs=49.6
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCc-------EEEEEecCCCC--C----------C-C--C-------------
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW-------KVYGAARRPPP--G----------W-F--P------------- 54 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-------~V~~l~R~~~~--~----------~-~--~------------- 54 (176)
+||.|+|++|+||++++..|+ ..+. ++..++..... . . . .
T Consensus 3 ~KV~IiGa~G~VG~~~a~~l~-----~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~ 77 (322)
T cd01338 3 VRVAVTGAAGQIGYSLLFRIA-----SGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITDDPNVAFK 77 (322)
T ss_pred eEEEEECCCcHHHHHHHHHHH-----hccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEecCcHHHhC
Confidence 589999999999999999998 4554 68888874321 0 0 0 0
Q ss_pred -CCcc----------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 55 -TALV----------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 55 -~~~v----------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
.+.| ..+..+.+..|+...+.+.+.+.++
T Consensus 78 daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~ 117 (322)
T cd01338 78 DADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDV 117 (322)
T ss_pred CCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 0011 2245668899999999999999998
No 304
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=96.51 E-value=0.0043 Score=48.14 Aligned_cols=35 Identities=26% Similarity=0.194 Sum_probs=31.3
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
|+|.|+||+|.+|+.|+..|. +.|++|+..+|++.
T Consensus 1 MkI~IIGG~G~mG~ala~~L~-----~~G~~V~v~~r~~~ 35 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLA-----KAGNKIIIGSRDLE 35 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHH-----hCCCEEEEEEcCHH
Confidence 479999999999999999999 68999999988753
No 305
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=96.50 E-value=0.0045 Score=50.55 Aligned_cols=32 Identities=25% Similarity=0.226 Sum_probs=29.2
Q ss_pred CCCCeEEEEcC--ChHHHHHHHHHhhCCCCCCCCcEEEE
Q 030483 7 NPKSVALIIGV--TGISGLSLAEALKNPTTPGSPWKVYG 43 (176)
Q Consensus 7 ~~~~~vLVtGa--tGfiG~~l~~~L~~~~~~~~g~~V~~ 43 (176)
+++|++||||| +.-||.+++++|. +.|++|+.
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la-----~~Ga~Vv~ 40 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALA-----AAGAEILV 40 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHH-----HCCCEEEE
Confidence 56899999999 6889999999999 79999877
No 306
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=96.42 E-value=0.006 Score=50.67 Aligned_cols=35 Identities=23% Similarity=0.272 Sum_probs=29.3
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
+++|+|.||||++|+.+++.|.+ ..++++.++.++
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~----~p~~elv~v~~~ 36 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLN----HPEVEIVAVTSR 36 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHc----CCCceEEEEECc
Confidence 36899999999999999999994 457888776653
No 307
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=96.36 E-value=0.046 Score=44.78 Aligned_cols=80 Identities=18% Similarity=0.105 Sum_probs=54.2
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCc--EEEEEecCCC-CCCC-------------C-C---------------Cc
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPP-PGWF-------------P-T---------------AL 57 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~-~~~~-------------~-~---------------~~ 57 (176)
++|.|+|++|.+|.+++..|+ ..|. +|+.++|... +... . . +.
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~-----~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d~~~l~~aDi 75 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLA-----KEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSDLSDVAGSDI 75 (309)
T ss_pred CEEEEECCCChHHHHHHHHHH-----hCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCCHHHhCCCCE
Confidence 589999999999999999999 5665 5999998431 1000 0 0 00
Q ss_pred c----------cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEecc
Q 030483 58 V----------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG 98 (176)
Q Consensus 58 v----------~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss 98 (176)
+ ..+..+.+..|......+++.+.+. ++.. .++.+++
T Consensus 76 Viitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~---~~~~-~viv~~n 122 (309)
T cd05294 76 VIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEF---APDT-KILVVTN 122 (309)
T ss_pred EEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH---CCCe-EEEEeCC
Confidence 0 1133567788999999999998887 4442 3555553
No 308
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.35 E-value=0.0072 Score=49.24 Aligned_cols=35 Identities=20% Similarity=0.204 Sum_probs=29.9
Q ss_pred CCCCeEEEEcCC--hHHHHHHHHHhhCCCCCCCCcEEEEEec
Q 030483 7 NPKSVALIIGVT--GISGLSLAEALKNPTTPGSPWKVYGAAR 46 (176)
Q Consensus 7 ~~~~~vLVtGat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R 46 (176)
.++|++|||||+ .-||++++++|. ++|++|+..+|
T Consensus 6 ~~gk~alITGa~~~~GIG~a~A~~la-----~~Ga~Vvv~~~ 42 (299)
T PRK06300 6 LTGKIAFIAGIGDDQGYGWGIAKALA-----EAGATILVGTW 42 (299)
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHH-----HCCCEEEEEec
Confidence 467899999994 679999999999 79999887653
No 309
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=96.33 E-value=0.0068 Score=43.93 Aligned_cols=71 Identities=20% Similarity=0.169 Sum_probs=51.2
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------------CCC---------------CCcc----
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------------WFP---------------TALV---- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------------~~~---------------~~~v---- 58 (176)
+||.|+|++|.+|++++..|+.. .-+.+++.+++..... ... .+.+
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~---~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~~aDivvita 77 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQ---GLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDYEALKDADIVVITA 77 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHT---TTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSGGGGTTESEEEETT
T ss_pred CEEEEECCCChHHHHHHHHHHhC---CCCCceEEeccCcccceeeehhhhhhhhhcccccccccccccccccccEEEEec
Confidence 48999999999999999999831 2334788888874321 000 0111
Q ss_pred ------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 ------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 ------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
..+..+.+..|....+.+.+.+.+.
T Consensus 78 g~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~ 108 (141)
T PF00056_consen 78 GVPRKPGMSRLDLLEANAKIVKEIAKKIAKY 108 (141)
T ss_dssp STSSSTTSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccHHHHHHHhHhHHHHHHHHHHHh
Confidence 2345678899999999999999998
No 310
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=96.24 E-value=0.0067 Score=50.17 Aligned_cols=34 Identities=21% Similarity=0.261 Sum_probs=27.8
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCc---EEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW---KVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~---~V~~l~R~~ 48 (176)
++|+|.||||++|+.|++.|. +.+| +++.+.+..
T Consensus 2 ~~V~IvGAtG~vG~~l~~lL~-----~~~hp~~~l~~l~s~~ 38 (334)
T PRK14874 2 YNVAVVGATGAVGREMLNILE-----ERNFPVDKLRLLASAR 38 (334)
T ss_pred CEEEEECCCCHHHHHHHHHHH-----hCCCCcceEEEEEccc
Confidence 589999999999999999998 5555 457776653
No 311
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=96.19 E-value=0.0077 Score=50.77 Aligned_cols=37 Identities=16% Similarity=0.326 Sum_probs=31.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
++++|.|.||||++|..|++.|.+ ....+|+.++++.
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~----hP~~el~~l~s~~ 73 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLAN----HPDFEITVMTADR 73 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHh----CCCCeEEEEEChh
Confidence 567999999999999999999994 3467899988753
No 312
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=96.06 E-value=0.0099 Score=49.95 Aligned_cols=37 Identities=22% Similarity=0.135 Sum_probs=32.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
..++|.|.||.|.+|+.++..|. ..|++|++++|++.
T Consensus 97 ~~~~I~IiGG~GlmG~slA~~l~-----~~G~~V~~~d~~~~ 133 (374)
T PRK11199 97 DLRPVVIVGGKGQLGRLFAKMLT-----LSGYQVRILEQDDW 133 (374)
T ss_pred ccceEEEEcCCChhhHHHHHHHH-----HCCCeEEEeCCCcc
Confidence 34789999999999999999999 78999999998653
No 313
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=95.95 E-value=0.087 Score=43.48 Aligned_cols=73 Identities=16% Similarity=0.049 Sum_probs=49.0
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCC--CCCcEEEEEecCC--CCCC-----------C--C--------------CCcc-
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTP--GSPWKVYGAARRP--PPGW-----------F--P--------------TALV- 58 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~--~~g~~V~~l~R~~--~~~~-----------~--~--------------~~~v- 58 (176)
||.|+||+|.||++++..|....-. ...++++.+++.. .... . . .+.|
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~~~i~~~~~~~~~~aDiVV 81 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVVITTDPEEAFKDVDVAI 81 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCCcEEecChHHHhCCCCEEE
Confidence 7999999999999999999830000 0233688888865 2110 0 0 0111
Q ss_pred ---------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 ---------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 ---------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
..+..+.+..|+...+.+.+.+.+.
T Consensus 82 itAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~ 115 (323)
T cd00704 82 LVGAFPRKPGMERADLLRKNAKIFKEQGEALNKV 115 (323)
T ss_pred EeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHh
Confidence 2245678899999999999999887
No 314
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=95.89 E-value=0.012 Score=49.69 Aligned_cols=34 Identities=29% Similarity=0.240 Sum_probs=29.9
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCC-cEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~~ 49 (176)
++|||.|+ |+||+.+++.|. .++ .+|++.+|+..
T Consensus 2 ~~ilviGa-G~Vg~~va~~la-----~~~d~~V~iAdRs~~ 36 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLA-----QNGDGEVTIADRSKE 36 (389)
T ss_pred CcEEEECC-chhHHHHHHHHH-----hCCCceEEEEeCCHH
Confidence 68999998 999999999999 455 89999999854
No 315
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=95.70 E-value=0.13 Score=42.42 Aligned_cols=73 Identities=15% Similarity=0.076 Sum_probs=48.6
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCC--CCcEEEEEecCCCC--CC---------C-----------C-------CCcc-
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPG--SPWKVYGAARRPPP--GW---------F-----------P-------TALV- 58 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~--~g~~V~~l~R~~~~--~~---------~-----------~-------~~~v- 58 (176)
+|.|+|++|.+|++++..|....--. +.++++.+++.+.. .. . . .+.|
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~~~aDiVV 80 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEGVVMELMDCAFPLLDGVVPTHDPAVAFTDVDVAI 80 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccceeEeehhcccchhcCceeccCChHHHhCCCCEEE
Confidence 58999999999999999998200000 23368888874332 00 0 0 0011
Q ss_pred ---------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 ---------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 ---------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
..+..+.+..|+...+.+.+.+.++
T Consensus 81 itAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~ 114 (324)
T TIGR01758 81 LVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKL 114 (324)
T ss_pred EcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 2245678899999999999999987
No 316
>PRK06849 hypothetical protein; Provisional
Probab=95.66 E-value=0.021 Score=47.97 Aligned_cols=37 Identities=24% Similarity=0.207 Sum_probs=33.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
++|+|||||++..+|-.+++.|. +.|++|++++..+.
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~-----~~G~~Vi~~d~~~~ 39 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFH-----NAGHTVILADSLKY 39 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCch
Confidence 46899999999999999999999 68999999987653
No 317
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=95.57 E-value=0.02 Score=48.49 Aligned_cols=38 Identities=26% Similarity=0.101 Sum_probs=33.0
Q ss_pred CCCCeEEEEcC----------------ChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 7 NPKSVALIIGV----------------TGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 7 ~~~~~vLVtGa----------------tGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
+.++++||||| ||.+|.+++++|. ..|++|+.+.+...
T Consensus 183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~-----~~Ga~V~~~~g~~~ 236 (390)
T TIGR00521 183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAY-----KRGADVTLITGPVS 236 (390)
T ss_pred cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHH-----HCCCEEEEeCCCCc
Confidence 56789999999 5789999999999 79999999887543
No 318
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=95.50 E-value=0.019 Score=47.68 Aligned_cols=21 Identities=29% Similarity=0.453 Sum_probs=20.2
Q ss_pred CeEEEEcCChHHHHHHHHHhh
Q 030483 10 SVALIIGVTGISGLSLAEALK 30 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~ 30 (176)
++|.|+||||++|..|++.|.
T Consensus 5 ~~IaIvGATG~vG~eLlrlL~ 25 (336)
T PRK05671 5 LDIAVVGATGTVGEALVQILE 25 (336)
T ss_pred CEEEEEccCCHHHHHHHHHHh
Confidence 589999999999999999999
No 319
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=95.46 E-value=0.027 Score=45.68 Aligned_cols=36 Identities=11% Similarity=-0.037 Sum_probs=31.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcE-EEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~-V~~l~R~~ 48 (176)
..+++++|+|| |-+|++++.+|. ..|++ |+.++|+.
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La-----~~G~~~V~I~~R~~ 160 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCA-----LDGAKEITIFNIKD 160 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHH-----HCCCCEEEEEeCCc
Confidence 45688999999 689999999999 68886 99999975
No 320
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.41 E-value=0.019 Score=43.44 Aligned_cols=38 Identities=18% Similarity=0.205 Sum_probs=34.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
.++.|+|||+.--||+.++.+|. ..|.+|+++.|.+.+
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La-----~aGA~ViAvaR~~a~ 43 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLA-----KAGAQVIAVARNEAN 43 (245)
T ss_pred cceEEEeecccccccHHHHHHHH-----hcCCEEEEEecCHHH
Confidence 46789999999999999999999 799999999998654
No 321
>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.40 E-value=0.049 Score=42.71 Aligned_cols=24 Identities=21% Similarity=0.264 Sum_probs=20.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhh
Q 030483 7 NPKSVALIIGVTGISGLSLAEALK 30 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~ 30 (176)
.+.+.+||||+|--||..++..++
T Consensus 4 ~~r~villTGaSrgiG~~~v~~i~ 27 (253)
T KOG1204|consen 4 NMRKVILLTGASRGIGTGSVATIL 27 (253)
T ss_pred ccceEEEEecCCCCccHHHHHHHH
Confidence 456789999999999988888887
No 322
>PRK08655 prephenate dehydrogenase; Provisional
Probab=95.38 E-value=0.023 Score=48.73 Aligned_cols=35 Identities=34% Similarity=0.317 Sum_probs=31.5
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
|+|+|+||+|.+|+.+++.|. ..|++|++++|++.
T Consensus 1 MkI~IIGG~G~mG~slA~~L~-----~~G~~V~v~~r~~~ 35 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLK-----EKGFEVIVTGRDPK 35 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHH-----HCCCEEEEEECChH
Confidence 479999999999999999999 68999999998754
No 323
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=95.35 E-value=0.22 Score=41.11 Aligned_cols=69 Identities=14% Similarity=0.012 Sum_probs=49.7
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCc-------EEEEEecCCCC--C----------C-C--C-------------
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW-------KVYGAARRPPP--G----------W-F--P------------- 54 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-------~V~~l~R~~~~--~----------~-~--~------------- 54 (176)
.||.|+|++|++|++++..|+ ..+. ++..++..... . . . .
T Consensus 4 ~KV~IIGa~G~VG~~~a~~l~-----~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~ 78 (323)
T TIGR01759 4 VRVAVTGAAGQIGYSLLFRIA-----SGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVATTDPEEAFK 78 (323)
T ss_pred eEEEEECCCcHHHHHHHHHHH-----hCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEecChHHHhC
Confidence 489999999999999999998 3553 68888874311 0 0 0 0
Q ss_pred -CCcc----------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 55 -TALV----------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 55 -~~~v----------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
.+.| ..+..+.+..|+...+.+.+.+.+.
T Consensus 79 daDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~ 118 (323)
T TIGR01759 79 DVDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKV 118 (323)
T ss_pred CCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 0111 2245678899999999999999998
No 324
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.35 E-value=0.029 Score=47.92 Aligned_cols=36 Identities=31% Similarity=0.267 Sum_probs=32.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.+|+++|+|+++ +|..+++.|+ ..|++|++.++..
T Consensus 3 ~~~k~v~iiG~g~-~G~~~A~~l~-----~~G~~V~~~d~~~ 38 (450)
T PRK14106 3 LKGKKVLVVGAGV-SGLALAKFLK-----KLGAKVILTDEKE 38 (450)
T ss_pred cCCCEEEEECCCH-HHHHHHHHHH-----HCCCEEEEEeCCc
Confidence 4568999999988 9999999999 7999999999864
No 325
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=95.32 E-value=0.023 Score=46.32 Aligned_cols=33 Identities=24% Similarity=0.266 Sum_probs=30.2
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
++|.|+| .|++|+.++..|+ ..|++|++++|++
T Consensus 3 ~~V~VIG-~G~mG~~iA~~la-----~~G~~V~v~d~~~ 35 (308)
T PRK06129 3 GSVAIIG-AGLIGRAWAIVFA-----RAGHEVRLWDADP 35 (308)
T ss_pred cEEEEEC-ccHHHHHHHHHHH-----HCCCeeEEEeCCH
Confidence 4799999 9999999999999 6899999999875
No 326
>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.
Probab=95.25 E-value=0.031 Score=46.34 Aligned_cols=32 Identities=16% Similarity=0.314 Sum_probs=26.1
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEe
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAA 45 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~ 45 (176)
++|.|+|++|++|++|++.|.+ ....++..+.
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~----~~~~~l~~v~ 32 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAK----HPYFELAKVV 32 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHh----CCCceEEEEE
Confidence 3799999999999999999983 3446887774
No 327
>PRK05442 malate dehydrogenase; Provisional
Probab=95.17 E-value=0.3 Score=40.37 Aligned_cols=69 Identities=13% Similarity=0.040 Sum_probs=48.7
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCc-------EEEEEecCCCC----C--------C-C--CC------------
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW-------KVYGAARRPPP----G--------W-F--PT------------ 55 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-------~V~~l~R~~~~----~--------~-~--~~------------ 55 (176)
+||.|+|++|.+|++++..|. ..+. ++..+++.+.. . . . ..
T Consensus 5 ~KV~IiGaaG~VG~~~a~~l~-----~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~y~~~~ 79 (326)
T PRK05442 5 VRVAVTGAAGQIGYSLLFRIA-----SGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVITDDPNVAFK 79 (326)
T ss_pred cEEEEECCCcHHHHHHHHHHH-----hhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEecChHHHhC
Confidence 489999999999999999888 3333 67778774321 0 0 0 00
Q ss_pred --Ccc----------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 56 --ALV----------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 56 --~~v----------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
+.| ..+..+.+..|+...+.+.+.+.++
T Consensus 80 daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~ 119 (326)
T PRK05442 80 DADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEV 119 (326)
T ss_pred CCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 011 2245678899999999999999986
No 328
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=95.09 E-value=0.033 Score=45.37 Aligned_cols=37 Identities=24% Similarity=0.210 Sum_probs=33.4
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
++-+.|||||.-||.+.+++|. .+|+.|+.++|...+
T Consensus 49 g~WAVVTGaTDGIGKayA~eLA-----krG~nvvLIsRt~~K 85 (312)
T KOG1014|consen 49 GSWAVVTGATDGIGKAYARELA-----KRGFNVVLISRTQEK 85 (312)
T ss_pred CCEEEEECCCCcchHHHHHHHH-----HcCCEEEEEeCCHHH
Confidence 3678999999999999999999 799999999998654
No 329
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=95.07 E-value=0.18 Score=41.17 Aligned_cols=68 Identities=22% Similarity=0.214 Sum_probs=50.0
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCC--cEEEEEecCCCCCC-------------C-C-------------CCcc--
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPGW-------------F-P-------------TALV-- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~~~-------------~-~-------------~~~v-- 58 (176)
++|.|.|+ |.+|+.++..|+ ..| ++|..++|...... . . .+.+
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~-----~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~~~l~~aDIVIi 74 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLV-----NQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYSDCKDADIVVI 74 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHH-----hcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCHHHhCCCCEEEE
Confidence 47899996 899999999999 577 68999998654310 0 0 0111
Q ss_pred --------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 --------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 --------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
..+..+.+..|....+.+.+.+.+.
T Consensus 75 tag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~ 107 (306)
T cd05291 75 TAGAPQKPGETRLDLLEKNAKIMKSIVPKIKAS 107 (306)
T ss_pred ccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 2245677889999999999999998
No 330
>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional
Probab=94.91 E-value=0.064 Score=44.06 Aligned_cols=37 Identities=24% Similarity=0.320 Sum_probs=29.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|+.+|.|.||||++|..|++.|.+ ....++..+..+.
T Consensus 1 ~~~~VaIvGAtGy~G~eLlrlL~~----hp~~~l~~~~s~~ 37 (313)
T PRK11863 1 MKPKVFIDGEAGTTGLQIRERLAG----RSDIELLSIPEAK 37 (313)
T ss_pred CCcEEEEECCCCHHHHHHHHHHhc----CCCeEEEEEecCC
Confidence 567899999999999999999984 3445677766543
No 331
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=94.88 E-value=0.048 Score=45.40 Aligned_cols=31 Identities=23% Similarity=0.231 Sum_probs=26.3
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEE
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGA 44 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l 44 (176)
++|.|.||||++|..+++.|.+ ..+++++.+
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~----hP~~el~~l 31 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLN----HPEVEITYL 31 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHc----CCCceEEEE
Confidence 4799999999999999999994 456788754
No 332
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=94.80 E-value=0.064 Score=41.11 Aligned_cols=36 Identities=25% Similarity=0.187 Sum_probs=31.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.+|+++|+|. |-+|+++++.|. +.|++|++.+++.
T Consensus 26 l~gk~v~I~G~-G~vG~~~A~~L~-----~~G~~Vvv~D~~~ 61 (200)
T cd01075 26 LEGKTVAVQGL-GKVGYKLAEHLL-----EEGAKLIVADINE 61 (200)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHH-----HCCCEEEEEcCCH
Confidence 45789999997 689999999999 7999999887764
No 333
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.76 E-value=0.056 Score=46.11 Aligned_cols=35 Identities=23% Similarity=0.305 Sum_probs=31.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+++++|||++| +|.+.++.|+ +.|++|.+.+++.
T Consensus 4 ~~k~v~v~G~g~-~G~s~a~~l~-----~~G~~V~~~d~~~ 38 (447)
T PRK02472 4 QNKKVLVLGLAK-SGYAAAKLLH-----KLGANVTVNDGKP 38 (447)
T ss_pred CCCEEEEEeeCH-HHHHHHHHHH-----HCCCEEEEEcCCC
Confidence 467899999998 9999999999 7999999998754
No 334
>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]
Probab=94.71 E-value=0.045 Score=43.72 Aligned_cols=25 Identities=32% Similarity=0.396 Sum_probs=22.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKN 31 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~ 31 (176)
||.|.+||||++.-||-+||.+|++
T Consensus 1 ~~RKvalITGanSglGl~i~~RLl~ 25 (341)
T KOG1478|consen 1 MMRKVALITGANSGLGLAICKRLLA 25 (341)
T ss_pred CCceEEEEecCCCcccHHHHHHHHh
Confidence 4667899999999999999999995
No 335
>PRK08818 prephenate dehydrogenase; Provisional
Probab=94.68 E-value=0.055 Score=45.51 Aligned_cols=36 Identities=28% Similarity=0.325 Sum_probs=31.4
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+++|+|.|.+|.||+.+++.|.+ ..+++|++++|.+
T Consensus 4 ~~~I~IIGl~GliGgslA~alk~----~~~~~V~g~D~~d 39 (370)
T PRK08818 4 QPVVGIVGSAGAYGRWLARFLRT----RMQLEVIGHDPAD 39 (370)
T ss_pred CCEEEEECCCCHHHHHHHHHHHh----cCCCEEEEEcCCc
Confidence 56899999999999999999994 3488999999864
No 336
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=94.62 E-value=0.044 Score=45.61 Aligned_cols=28 Identities=25% Similarity=0.398 Sum_probs=24.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcE
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWK 40 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~ 40 (176)
++.+|.|.||||++|..|++.|. .++|.
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~-----~~~hP 33 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLT-----DRDFP 33 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHH-----hCCCC
Confidence 46789999999999999999998 55663
No 337
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=94.55 E-value=0.046 Score=46.59 Aligned_cols=34 Identities=29% Similarity=0.361 Sum_probs=30.0
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
|+++|+|+ |.+|+++++.|. +.|++|+.+++++.
T Consensus 1 m~viIiG~-G~ig~~~a~~L~-----~~g~~v~vid~~~~ 34 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLS-----GENNDVTVIDTDEE 34 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHH-----hCCCcEEEEECCHH
Confidence 47999997 999999999999 68999999988643
No 338
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=94.45 E-value=0.076 Score=43.34 Aligned_cols=36 Identities=25% Similarity=0.165 Sum_probs=31.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
++.++|+|.| .|-||+.++..|. +.|++|+.+.|+.
T Consensus 3 ~~~m~I~IiG-~GaiG~~lA~~L~-----~~g~~V~~~~r~~ 38 (313)
T PRK06249 3 SETPRIGIIG-TGAIGGFYGAMLA-----RAGFDVHFLLRSD 38 (313)
T ss_pred CcCcEEEEEC-CCHHHHHHHHHHH-----HCCCeEEEEEeCC
Confidence 4557899996 6889999999999 6899999999975
No 339
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=94.36 E-value=0.078 Score=37.41 Aligned_cols=35 Identities=29% Similarity=0.523 Sum_probs=29.1
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEE-EecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYG-AARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~-l~R~~ 48 (176)
++|.|.|++|-.|+.+++.+.+ ..++++.+ ++|++
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~----~~~~~lv~~v~~~~ 36 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILE----SPGFELVGAVDRKP 36 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHH----STTEEEEEEEETTT
T ss_pred CEEEEECCCCHHHHHHHHHHHh----cCCcEEEEEEecCC
Confidence 4799999999999999999995 58899665 45555
No 340
>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.
Probab=94.28 E-value=0.041 Score=45.70 Aligned_cols=27 Identities=22% Similarity=0.391 Sum_probs=23.1
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEE
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVY 42 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~ 42 (176)
+|+|.||||++|..|++.|. +.+|.+.
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~-----~~~hp~~ 27 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILE-----ERNFPID 27 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHH-----hCCCChh
Confidence 58999999999999999998 5677643
No 341
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=94.23 E-value=0.066 Score=44.01 Aligned_cols=34 Identities=21% Similarity=0.181 Sum_probs=29.8
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.++|.|.| .|.+|+.++..|. ..|++|+.++|++
T Consensus 2 ~mkI~IiG-~G~mG~~~A~~L~-----~~G~~V~~~~r~~ 35 (341)
T PRK08229 2 MARICVLG-AGSIGCYLGGRLA-----AAGADVTLIGRAR 35 (341)
T ss_pred CceEEEEC-CCHHHHHHHHHHH-----hcCCcEEEEecHH
Confidence 46799997 7899999999999 6899999999864
No 342
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=94.22 E-value=0.069 Score=41.31 Aligned_cols=34 Identities=29% Similarity=0.223 Sum_probs=27.9
Q ss_pred EEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 12 vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
+...||+|-||+.|+++|. ..||+|+.-+|+.+.
T Consensus 3 ~~~i~GtGniG~alA~~~a-----~ag~eV~igs~r~~~ 36 (211)
T COG2085 3 IIAIIGTGNIGSALALRLA-----KAGHEVIIGSSRGPK 36 (211)
T ss_pred EEEEeccChHHHHHHHHHH-----hCCCeEEEecCCChh
Confidence 4455779999999999999 799999888776554
No 343
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=94.21 E-value=0.087 Score=38.01 Aligned_cols=35 Identities=26% Similarity=0.183 Sum_probs=29.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCC-cEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~ 48 (176)
..++++|+|+ |.+|+.+++.|. ..| ++|+.++|+.
T Consensus 18 ~~~~i~iiG~-G~~g~~~a~~l~-----~~g~~~v~v~~r~~ 53 (155)
T cd01065 18 KGKKVLILGA-GGAARAVAYALA-----ELGAAKIVIVNRTL 53 (155)
T ss_pred CCCEEEEECC-cHHHHHHHHHHH-----HCCCCEEEEEcCCH
Confidence 3578999997 899999999999 454 7898888864
No 344
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=94.20 E-value=0.095 Score=42.71 Aligned_cols=37 Identities=24% Similarity=0.240 Sum_probs=31.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
.+++|.|.| +|-+|+++++.|. ..|++|+.++|+...
T Consensus 3 ~~m~I~iiG-~G~~G~~lA~~l~-----~~G~~V~~~~r~~~~ 39 (308)
T PRK14619 3 QPKTIAILG-AGAWGSTLAGLAS-----ANGHRVRVWSRRSGL 39 (308)
T ss_pred CCCEEEEEC-ccHHHHHHHHHHH-----HCCCEEEEEeCCCCC
Confidence 456899996 7999999999999 799999999997643
No 345
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=94.20 E-value=0.078 Score=42.67 Aligned_cols=36 Identities=22% Similarity=0.314 Sum_probs=32.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+.++||+||+|.+|..+++.+. ..|++|++++|++
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~-----~~g~~v~~~~~~~ 197 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAK-----ALGARVIAVTRSP 197 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HcCCeEEEEeCCH
Confidence 45789999999999999999999 6899999988764
No 346
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=94.19 E-value=0.087 Score=42.38 Aligned_cols=35 Identities=17% Similarity=0.091 Sum_probs=30.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCC-cEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~ 48 (176)
.++++||+|+ |.+|++++.+|. ..| .+|+.++|+.
T Consensus 122 ~~k~vlVlGa-Gg~a~ai~~aL~-----~~g~~~V~v~~R~~ 157 (278)
T PRK00258 122 KGKRILILGA-GGAARAVILPLL-----DLGVAEITIVNRTV 157 (278)
T ss_pred CCCEEEEEcC-cHHHHHHHHHHH-----HcCCCEEEEEeCCH
Confidence 4578999997 889999999999 688 6899999864
No 347
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=94.19 E-value=0.084 Score=37.77 Aligned_cols=36 Identities=28% Similarity=0.271 Sum_probs=30.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcE-EEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~-V~~l~R~~ 48 (176)
..++++||.|+ |-.|+.++.+|. ..|.+ |+.+.|+.
T Consensus 10 l~~~~vlviGa-Gg~ar~v~~~L~-----~~g~~~i~i~nRt~ 46 (135)
T PF01488_consen 10 LKGKRVLVIGA-GGAARAVAAALA-----ALGAKEITIVNRTP 46 (135)
T ss_dssp GTTSEEEEESS-SHHHHHHHHHHH-----HTTSSEEEEEESSH
T ss_pred cCCCEEEEECC-HHHHHHHHHHHH-----HcCCCEEEEEECCH
Confidence 35789999997 669999999999 67876 98888864
No 348
>PRK06444 prephenate dehydrogenase; Provisional
Probab=94.16 E-value=0.062 Score=41.23 Aligned_cols=28 Identities=32% Similarity=0.466 Sum_probs=25.9
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEE
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVY 42 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~ 42 (176)
+++.|.||+|-.|+.+++.|. +.|+.|+
T Consensus 1 ~~~~iiG~~G~mG~~~~~~~~-----~~g~~v~ 28 (197)
T PRK06444 1 MMEIIIGKNGRLGRVLCSILD-----DNGLGVY 28 (197)
T ss_pred CEEEEEecCCcHHHHHHHHHH-----hCCCEEE
Confidence 479999999999999999999 7899986
No 349
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=94.10 E-value=0.39 Score=39.46 Aligned_cols=69 Identities=22% Similarity=0.254 Sum_probs=49.8
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCc--EEEEEecCCCCC------------C-CC-------------CCcc--
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPPPG------------W-FP-------------TALV-- 58 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~~~------------~-~~-------------~~~v-- 58 (176)
++||.|+|+ |.+|++++..|+ ..|. ++..+++..... . .. .+.+
T Consensus 6 ~~ki~iiGa-G~vG~~~a~~l~-----~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~~~~~~~~adivIi 79 (315)
T PRK00066 6 HNKVVLVGD-GAVGSSYAYALV-----NQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAGDYSDCKDADLVVI 79 (315)
T ss_pred CCEEEEECC-CHHHHHHHHHHH-----hcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeCCHHHhCCCCEEEE
Confidence 358999998 999999999998 5666 688888754321 0 00 0111
Q ss_pred --------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 --------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 --------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
..+....+..|....+.+++.+.+.
T Consensus 80 tag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~ 112 (315)
T PRK00066 80 TAGAPQKPGETRLDLVEKNLKIFKSIVGEVMAS 112 (315)
T ss_pred ecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 1244667889999999999999887
No 350
>PLN02256 arogenate dehydrogenase
Probab=94.10 E-value=0.097 Score=42.82 Aligned_cols=36 Identities=25% Similarity=0.220 Sum_probs=31.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.+++|.|.| .|.+|+.+++.|. ..|++|++++|+.
T Consensus 34 ~~~~kI~IIG-~G~mG~slA~~L~-----~~G~~V~~~d~~~ 69 (304)
T PLN02256 34 SRKLKIGIVG-FGNFGQFLAKTFV-----KQGHTVLATSRSD 69 (304)
T ss_pred CCCCEEEEEe-eCHHHHHHHHHHH-----hCCCEEEEEECcc
Confidence 3467899999 7999999999999 6789999999875
No 351
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=94.03 E-value=0.12 Score=38.57 Aligned_cols=36 Identities=19% Similarity=0.219 Sum_probs=31.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.++++||.|+++.+|..+++.|. ..|.+|+.+.|..
T Consensus 43 ~gk~vlViG~G~~~G~~~a~~L~-----~~g~~V~v~~r~~ 78 (168)
T cd01080 43 AGKKVVVVGRSNIVGKPLAALLL-----NRNATVTVCHSKT 78 (168)
T ss_pred CCCEEEEECCcHHHHHHHHHHHh-----hCCCEEEEEECCc
Confidence 56899999998889999999999 6888898888864
No 352
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=93.98 E-value=0.13 Score=33.04 Aligned_cols=35 Identities=31% Similarity=0.284 Sum_probs=29.6
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG 51 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~ 51 (176)
+++|.| +|++|..++..|. ..|.+|+.+.|++...
T Consensus 1 ~vvViG-gG~ig~E~A~~l~-----~~g~~vtli~~~~~~~ 35 (80)
T PF00070_consen 1 RVVVIG-GGFIGIELAEALA-----ELGKEVTLIERSDRLL 35 (80)
T ss_dssp EEEEES-SSHHHHHHHHHHH-----HTTSEEEEEESSSSSS
T ss_pred CEEEEC-cCHHHHHHHHHHH-----HhCcEEEEEeccchhh
Confidence 466766 6999999999999 7999999999987543
No 353
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=93.98 E-value=0.11 Score=45.80 Aligned_cols=36 Identities=28% Similarity=0.229 Sum_probs=30.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.++++||+|+ |-+|++++.+|. ..|++|+.++|+.
T Consensus 377 ~~~k~vlIlGa-GGagrAia~~L~-----~~G~~V~i~nR~~ 412 (529)
T PLN02520 377 LAGKLFVVIGA-GGAGKALAYGAK-----EKGARVVIANRTY 412 (529)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHH-----HCCCEEEEEcCCH
Confidence 45689999998 679999999999 6888999888853
No 354
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=93.87 E-value=0.34 Score=41.74 Aligned_cols=69 Identities=14% Similarity=0.077 Sum_probs=49.3
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCC-------Cc--EEEEEecCCCCCC--------------CC------------
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGS-------PW--KVYGAARRPPPGW--------------FP------------ 54 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~-------g~--~V~~l~R~~~~~~--------------~~------------ 54 (176)
-+|.|+|++|.+|.+++..|+ .. +. ++..+++...... ..
T Consensus 101 ~KV~IIGAaG~VG~~~A~~L~-----~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~~ye~~k 175 (444)
T PLN00112 101 INVAVSGAAGMISNHLLFKLA-----SGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGIDPYEVFQ 175 (444)
T ss_pred eEEEEECCCcHHHHHHHHHHH-----hcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecCCHHHhC
Confidence 479999999999999999998 34 44 5777776543210 00
Q ss_pred -CCcc----------cCcHHHHHHHHHHHHHHHHHHHHh-c
Q 030483 55 -TALV----------QESEEVNIFKNSTMLKNVLSVLVS-S 83 (176)
Q Consensus 55 -~~~v----------~~~~~~~~~~N~~~t~~ll~a~~~-~ 83 (176)
.+++ ..+..+.++.|+...+.+.+.+.+ +
T Consensus 176 daDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a 216 (444)
T PLN00112 176 DAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVA 216 (444)
T ss_pred cCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 0111 224567889999999999999998 5
No 355
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=93.73 E-value=0.11 Score=39.50 Aligned_cols=36 Identities=22% Similarity=0.092 Sum_probs=27.6
Q ss_pred CCCeEEEEcC----------------ChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGV----------------TGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGa----------------tGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+++||||+| ||-.|.+|++++. ..|++|+.+....
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~-----~~Ga~V~li~g~~ 53 (185)
T PF04127_consen 2 KGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAA-----RRGAEVTLIHGPS 53 (185)
T ss_dssp TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHH-----HTT-EEEEEE-TT
T ss_pred CCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHH-----HCCCEEEEEecCc
Confidence 3577888876 8999999999999 7999999988763
No 356
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=93.65 E-value=0.11 Score=43.87 Aligned_cols=34 Identities=24% Similarity=0.289 Sum_probs=29.1
Q ss_pred CCCeEEEEcCChHHHHH--HHHHhhCCCCCCCCcEEEEEecC
Q 030483 8 PKSVALIIGVTGISGLS--LAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~--l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
.+|++||||+++-+|.+ ++++| . .|++|+++++.
T Consensus 40 ggK~aLVTGaSsGIGlA~~IA~al-~-----~GA~Vi~v~~~ 75 (398)
T PRK13656 40 GPKKVLVIGASSGYGLASRIAAAF-G-----AGADTLGVFFE 75 (398)
T ss_pred CCCEEEEECCCchHhHHHHHHHHH-H-----cCCeEEEEecC
Confidence 35899999999999999 88888 4 88998888853
No 357
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=93.62 E-value=0.16 Score=40.42 Aligned_cols=33 Identities=21% Similarity=0.296 Sum_probs=27.1
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEec
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAAR 46 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R 46 (176)
++|.|+|++|.+|+.+++.+.+ ..+.++.++..
T Consensus 2 mkV~IiG~~G~mG~~i~~~l~~----~~~~elvav~d 34 (257)
T PRK00048 2 IKVAVAGASGRMGRELIEAVEA----AEDLELVAAVD 34 (257)
T ss_pred cEEEEECCCCHHHHHHHHHHHh----CCCCEEEEEEe
Confidence 5899999999999999998884 46788777543
No 358
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=93.56 E-value=0.12 Score=43.28 Aligned_cols=34 Identities=32% Similarity=0.555 Sum_probs=26.4
Q ss_pred EEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCCCC
Q 030483 12 ALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPP 50 (176)
Q Consensus 12 vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~ 50 (176)
|+|.|| |++|+.+++.|++ ...+ +|+..+|+...
T Consensus 1 IlvlG~-G~vG~~~~~~L~~----~~~~~~v~va~r~~~~ 35 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLAR----RGPFEEVTVADRNPEK 35 (386)
T ss_dssp EEEE---SHHHHHHHHHHHC----TTCE-EEEEEESSHHH
T ss_pred CEEEcC-cHHHHHHHHHHhc----CCCCCcEEEEECCHHH
Confidence 789999 9999999999995 4446 89999987543
No 359
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=93.49 E-value=0.09 Score=39.61 Aligned_cols=33 Identities=24% Similarity=0.365 Sum_probs=27.7
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
+|.|.|+ |.+|+.++..++ ..|++|+.+++++.
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a-----~~G~~V~l~d~~~~ 33 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFA-----RAGYEVTLYDRSPE 33 (180)
T ss_dssp EEEEES--SHHHHHHHHHHH-----HTTSEEEEE-SSHH
T ss_pred CEEEEcC-CHHHHHHHHHHH-----hCCCcEEEEECChH
Confidence 5789997 999999999999 68999999998754
No 360
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=93.43 E-value=0.12 Score=44.06 Aligned_cols=34 Identities=26% Similarity=0.331 Sum_probs=30.3
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
++|.|.| .|++|..++..|. ..|++|+++++++.
T Consensus 4 ~kI~VIG-lG~~G~~~A~~La-----~~G~~V~~~D~~~~ 37 (415)
T PRK11064 4 ETISVIG-LGYIGLPTAAAFA-----SRQKQVIGVDINQH 37 (415)
T ss_pred cEEEEEC-cchhhHHHHHHHH-----hCCCEEEEEeCCHH
Confidence 6899997 7999999999999 68999999998754
No 361
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=93.35 E-value=0.09 Score=39.84 Aligned_cols=34 Identities=32% Similarity=0.388 Sum_probs=26.4
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
|+|.|.| .|++|.-++..|. +.||+|++++.++.
T Consensus 1 M~I~ViG-lGyvGl~~A~~lA-----~~G~~V~g~D~~~~ 34 (185)
T PF03721_consen 1 MKIAVIG-LGYVGLPLAAALA-----EKGHQVIGVDIDEE 34 (185)
T ss_dssp -EEEEE---STTHHHHHHHHH-----HTTSEEEEE-S-HH
T ss_pred CEEEEEC-CCcchHHHHHHHH-----hCCCEEEEEeCChH
Confidence 5788885 8999999999999 79999999987653
No 362
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=93.22 E-value=0.14 Score=41.10 Aligned_cols=33 Identities=30% Similarity=0.270 Sum_probs=29.0
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|+|+|.|+ |-+|+.++..|. ..|++|+.++|++
T Consensus 1 m~I~IiG~-G~~G~~~a~~L~-----~~g~~V~~~~r~~ 33 (304)
T PRK06522 1 MKIAILGA-GAIGGLFGAALA-----QAGHDVTLVARRG 33 (304)
T ss_pred CEEEEECC-CHHHHHHHHHHH-----hCCCeEEEEECCh
Confidence 47999996 899999999999 6899999999854
No 363
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=93.20 E-value=0.15 Score=41.61 Aligned_cols=37 Identities=16% Similarity=0.160 Sum_probs=31.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+.++||+||+|.+|..+++.+. ..|.+|+++++++.
T Consensus 151 ~g~~VlI~Ga~G~vG~~aiqlAk-----~~G~~Vi~~~~~~~ 187 (338)
T cd08295 151 KGETVFVSAASGAVGQLVGQLAK-----LKGCYVVGSAGSDE 187 (338)
T ss_pred CCCEEEEecCccHHHHHHHHHHH-----HcCCEEEEEeCCHH
Confidence 45799999999999999998887 68999998887643
No 364
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=93.17 E-value=0.17 Score=40.45 Aligned_cols=35 Identities=31% Similarity=0.322 Sum_probs=30.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
..++++|+|+ |-+|++++..|. ..|++|+.++|+.
T Consensus 116 ~~k~vliiGa-Gg~g~aia~~L~-----~~g~~v~v~~R~~ 150 (270)
T TIGR00507 116 PNQRVLIIGA-GGAARAVALPLL-----KADCNVIIANRTV 150 (270)
T ss_pred cCCEEEEEcC-cHHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 3578999998 789999999999 6788999888864
No 365
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.15 E-value=0.21 Score=40.45 Aligned_cols=36 Identities=22% Similarity=0.195 Sum_probs=31.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
..+++++|.|++|.+|+.++..|+ ..|..|+.+.|+
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~-----~~gatVtv~~~~ 192 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLL-----NANATVTICHSR 192 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHH-----hCCCEEEEEeCC
Confidence 467899999999999999999999 678888888774
No 366
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=93.11 E-value=0.19 Score=35.01 Aligned_cols=30 Identities=27% Similarity=0.388 Sum_probs=26.2
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEE
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGA 44 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l 44 (176)
++.|+|++|.+|..+++.|.. ..++++.++
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~----~~~~~l~av 30 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAE----HPDFEVVAL 30 (122)
T ss_pred CEEEECCCChHHHHHHHHHhc----CCCceEEEE
Confidence 478999999999999999994 468898888
No 367
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=93.08 E-value=0.26 Score=36.87 Aligned_cols=37 Identities=35% Similarity=0.445 Sum_probs=32.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
.++++.|.| .|-||+++++.|. .-|.+|++++|...+
T Consensus 35 ~g~tvgIiG-~G~IG~~vA~~l~-----~fG~~V~~~d~~~~~ 71 (178)
T PF02826_consen 35 RGKTVGIIG-YGRIGRAVARRLK-----AFGMRVIGYDRSPKP 71 (178)
T ss_dssp TTSEEEEES-TSHHHHHHHHHHH-----HTT-EEEEEESSCHH
T ss_pred CCCEEEEEE-EcCCcCeEeeeee-----cCCceeEEecccCCh
Confidence 578999998 6899999999999 799999999998653
No 368
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=92.97 E-value=0.14 Score=41.33 Aligned_cols=34 Identities=15% Similarity=0.245 Sum_probs=30.0
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
++|.|.|+ |.+|+.++..|+ ..|++|+.+++++.
T Consensus 2 ~~V~VIG~-G~mG~~iA~~la-----~~G~~V~~~d~~~~ 35 (288)
T PRK09260 2 EKLVVVGA-GVMGRGIAYVFA-----VSGFQTTLVDIKQE 35 (288)
T ss_pred cEEEEECc-cHHHHHHHHHHH-----hCCCcEEEEeCCHH
Confidence 57899996 999999999999 68999999998753
No 369
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=92.97 E-value=0.2 Score=38.46 Aligned_cols=35 Identities=14% Similarity=-0.001 Sum_probs=30.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.++++||.|| |-+|...++.|+ +.|.+|+.+++..
T Consensus 9 ~~k~vLVIGg-G~va~~ka~~Ll-----~~ga~V~VIs~~~ 43 (202)
T PRK06718 9 SNKRVVIVGG-GKVAGRRAITLL-----KYGAHIVVISPEL 43 (202)
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-----HCCCeEEEEcCCC
Confidence 4689999997 889999999999 6889999988754
No 370
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=92.93 E-value=0.14 Score=41.20 Aligned_cols=33 Identities=36% Similarity=0.505 Sum_probs=29.2
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
+|.|.| .|.+|+.++..|. ..|++|++++|++.
T Consensus 2 ~I~IIG-~G~mG~sla~~L~-----~~g~~V~~~d~~~~ 34 (279)
T PRK07417 2 KIGIVG-LGLIGGSLGLDLR-----SLGHTVYGVSRRES 34 (279)
T ss_pred eEEEEe-ecHHHHHHHHHHH-----HCCCEEEEEECCHH
Confidence 688998 7999999999999 68999999998753
No 371
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.85 E-value=0.22 Score=40.65 Aligned_cols=36 Identities=25% Similarity=0.228 Sum_probs=32.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEe-cC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAA-RR 47 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~-R~ 47 (176)
..+++|+|.|.+|.+|..++..|+ .+|+.|+.+. |.
T Consensus 156 ~~Gk~V~viGrs~~mG~PmA~~L~-----~~g~tVtv~~~rT 192 (296)
T PRK14188 156 LSGLNAVVIGRSNLVGKPMAQLLL-----AANATVTIAHSRT 192 (296)
T ss_pred CCCCEEEEEcCCcchHHHHHHHHH-----hCCCEEEEECCCC
Confidence 468999999999999999999999 6999999984 54
No 372
>PLN02602 lactate dehydrogenase
Probab=92.75 E-value=0.99 Score=37.73 Aligned_cols=68 Identities=16% Similarity=0.237 Sum_probs=47.6
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCc--EEEEEecCCCCC-------------CCC--------------CCcc--
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPPPG-------------WFP--------------TALV-- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~~~-------------~~~--------------~~~v-- 58 (176)
+||.|+|+ |.||++++..|+ ..+. ++..++...... ... .+.|
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~-----~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~~~dy~~~~daDiVVi 111 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTIL-----TQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILASTDYAVTAGSDLCIV 111 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHH-----hCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEeCCCHHHhCCCCEEEE
Confidence 59999996 999999999998 3443 688888754321 000 0111
Q ss_pred --------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 --------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 --------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
..+..+.+..|+...+.+.+.+.+.
T Consensus 112 tAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~ 144 (350)
T PLN02602 112 TAGARQIPGESRLNLLQRNVALFRKIIPELAKY 144 (350)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1244567889999999999999887
No 373
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=92.73 E-value=0.17 Score=42.04 Aligned_cols=23 Identities=30% Similarity=0.352 Sum_probs=21.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhh
Q 030483 8 PKSVALIIGVTGISGLSLAEALK 30 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~ 30 (176)
.+++|.|.||||++|..|++.|.
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~ 25 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLA 25 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHh
Confidence 46799999999999999999998
No 374
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=92.70 E-value=0.17 Score=39.48 Aligned_cols=35 Identities=29% Similarity=0.285 Sum_probs=29.7
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
|+++|.| .|-+|+.|++.|. +.|++|+++++.+..
T Consensus 1 m~iiIiG-~G~vG~~va~~L~-----~~g~~Vv~Id~d~~~ 35 (225)
T COG0569 1 MKIIIIG-AGRVGRSVARELS-----EEGHNVVLIDRDEER 35 (225)
T ss_pred CEEEEEC-CcHHHHHHHHHHH-----hCCCceEEEEcCHHH
Confidence 4677777 6889999999999 799999999987643
No 375
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=92.68 E-value=0.21 Score=40.67 Aligned_cols=36 Identities=31% Similarity=0.412 Sum_probs=29.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc--EEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~ 49 (176)
+.++|.|.| .|-+|..++..|. ..|+ +|++++|++.
T Consensus 5 ~~~~I~IIG-~G~mG~sla~~l~-----~~g~~~~V~~~dr~~~ 42 (307)
T PRK07502 5 LFDRVALIG-IGLIGSSLARAIR-----RLGLAGEIVGADRSAE 42 (307)
T ss_pred CCcEEEEEe-eCHHHHHHHHHHH-----hcCCCcEEEEEECCHH
Confidence 346899998 8999999999999 5775 7999998753
No 376
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=92.56 E-value=1.7 Score=35.74 Aligned_cols=70 Identities=19% Similarity=0.117 Sum_probs=48.1
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCC------------C-------CC---------Ccc---
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------------F-------PT---------ALV--- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~------------~-------~~---------~~v--- 58 (176)
+||.|+|+ |+||+.++..|+. ..-+-++..++....... . .+ +.+
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~---~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~~~y~~~~~aDiVvit 76 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLL---QGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGDGDYEDLKGADIVVIT 76 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhc---ccccceEEEEEcccccccchhcchhhcchhccCceEEecCCChhhhcCCCEEEEe
Confidence 47999999 9999999999983 122336888887632210 0 00 011
Q ss_pred -------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 -------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 -------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
-.+...++..|......+.+.+.+.
T Consensus 77 AG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~ 108 (313)
T COG0039 77 AGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKY 108 (313)
T ss_pred CCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh
Confidence 1145678899999999999999887
No 377
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=92.53 E-value=0.21 Score=40.47 Aligned_cols=36 Identities=22% Similarity=0.440 Sum_probs=31.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+++++|+|. |.+|+.+++.|. ..|++|+..+|+..
T Consensus 150 ~gk~v~IiG~-G~iG~avA~~L~-----~~G~~V~v~~R~~~ 185 (287)
T TIGR02853 150 HGSNVMVLGF-GRTGMTIARTFS-----ALGARVFVGARSSA 185 (287)
T ss_pred CCCEEEEEcC-hHHHHHHHHHHH-----HCCCEEEEEeCCHH
Confidence 4689999997 779999999999 68999999998753
No 378
>PRK12409 D-amino acid dehydrogenase small subunit; Provisional
Probab=92.32 E-value=0.24 Score=41.63 Aligned_cols=33 Identities=33% Similarity=0.422 Sum_probs=29.6
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+|+|.| +|++|..++.+|. +.|++|+.+.|..
T Consensus 2 ~~vvIIG-aG~~G~~~A~~La-----~~g~~V~vle~~~ 34 (410)
T PRK12409 2 SHIAVIG-AGITGVTTAYALA-----QRGYQVTVFDRHR 34 (410)
T ss_pred CEEEEEC-CCHHHHHHHHHHH-----HCCCeEEEEeCCC
Confidence 4799999 5999999999999 6899999999976
No 379
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=92.26 E-value=0.27 Score=39.85 Aligned_cols=36 Identities=22% Similarity=0.219 Sum_probs=30.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+.+|||+||+|-+|..+++.+. ..|.+|++++++.
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk-----~~G~~Vi~~~~s~ 173 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAK-----LKGCKVVGAAGSD 173 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHH-----HcCCEEEEEeCCH
Confidence 35789999999999999988877 6899999888764
No 380
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=92.20 E-value=0.24 Score=39.90 Aligned_cols=35 Identities=17% Similarity=0.120 Sum_probs=30.4
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
-++|.|.|+ |.+|..++..|+ ..|++|+.++|++.
T Consensus 4 ~~kI~vIGa-G~mG~~iA~~la-----~~G~~V~l~d~~~~ 38 (292)
T PRK07530 4 IKKVGVIGA-GQMGNGIAHVCA-----LAGYDVLLNDVSAD 38 (292)
T ss_pred CCEEEEECC-cHHHHHHHHHHH-----HCCCeEEEEeCCHH
Confidence 468999985 999999999999 68999999998743
No 381
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=92.19 E-value=0.35 Score=32.88 Aligned_cols=34 Identities=21% Similarity=0.098 Sum_probs=29.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
.++++||.|| |-+|.+=++.|+ +.|.+|+.++..
T Consensus 6 ~~~~vlVvGg-G~va~~k~~~Ll-----~~gA~v~vis~~ 39 (103)
T PF13241_consen 6 KGKRVLVVGG-GPVAARKARLLL-----EAGAKVTVISPE 39 (103)
T ss_dssp TT-EEEEEEE-SHHHHHHHHHHC-----CCTBEEEEEESS
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-----hCCCEEEEECCc
Confidence 5689999997 789999999999 799999999887
No 382
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=92.18 E-value=0.22 Score=40.14 Aligned_cols=35 Identities=23% Similarity=0.320 Sum_probs=30.3
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.++|.|.| .|.+|+.+++.|. ..|++|++++|++.
T Consensus 2 ~~~IgviG-~G~mG~~~a~~l~-----~~g~~v~~~d~~~~ 36 (296)
T PRK11559 2 TMKVGFIG-LGIMGKPMSKNLL-----KAGYSLVVYDRNPE 36 (296)
T ss_pred CceEEEEc-cCHHHHHHHHHHH-----HCCCeEEEEcCCHH
Confidence 35799998 6999999999999 68999999988754
No 383
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=92.14 E-value=0.23 Score=38.85 Aligned_cols=27 Identities=19% Similarity=0.165 Sum_probs=23.7
Q ss_pred cCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 16 GVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 16 GatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
.++|.||.+++++|+ ..|++|+.++|.
T Consensus 22 ~SSGgIG~AIA~~la-----~~Ga~Vvlv~~~ 48 (227)
T TIGR02114 22 HSTGHLGKIITETFL-----SAGHEVTLVTTK 48 (227)
T ss_pred CcccHHHHHHHHHHH-----HCCCEEEEEcCh
Confidence 348999999999999 799999988763
No 384
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=92.10 E-value=0.29 Score=40.22 Aligned_cols=69 Identities=16% Similarity=0.161 Sum_probs=48.4
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCC--cEEEEEecCCCCC---------CC-------CC----------Ccc---
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPG---------WF-------PT----------ALV--- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~~---------~~-------~~----------~~v--- 58 (176)
+||.|+|++|.+|++++..|. ..+ .++..++...... .. .+ +.+
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~-----~~~~~~elvLiDi~~a~g~alDL~~~~~~~~i~~~~~~~~~y~~~~daDivvit 75 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLK-----LNPLVSELALYDIVNTPGVAADLSHINTPAKVTGYLGPEELKKALKGADVVVIP 75 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHH-----hCCCCcEEEEEecCccceeehHhHhCCCcceEEEecCCCchHHhcCCCCEEEEe
Confidence 489999999999999999998 455 3677776541110 00 11 111
Q ss_pred -------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 -------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 -------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
..+..+.+..|....+.+.+.+.++
T Consensus 76 aG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~ 107 (310)
T cd01337 76 AGVPRKPGMTRDDLFNINAGIVRDLATAVAKA 107 (310)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 2245678899999999999999988
No 385
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=92.09 E-value=0.26 Score=39.84 Aligned_cols=35 Identities=34% Similarity=0.296 Sum_probs=28.0
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.++|+|.| .|.||+.+++.|. +.||.|..+.++..
T Consensus 3 ~~~v~IvG-~GliG~s~a~~l~-----~~g~~v~i~g~d~~ 37 (279)
T COG0287 3 SMKVGIVG-LGLMGGSLARALK-----EAGLVVRIIGRDRS 37 (279)
T ss_pred CcEEEEEC-CchHHHHHHHHHH-----HcCCeEEEEeecCc
Confidence 35666666 9999999999999 79999877766543
No 386
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=92.00 E-value=0.25 Score=41.03 Aligned_cols=35 Identities=20% Similarity=0.207 Sum_probs=28.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEec
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAAR 46 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R 46 (176)
+++||.|.||+|+.|..|++.|.. ....++...+.
T Consensus 1 ~~~kV~IvGasGYtG~EL~rlL~~----Hp~ve~~~~ss 35 (349)
T COG0002 1 MMIKVGIVGASGYTGLELLRLLAG----HPDVELILISS 35 (349)
T ss_pred CCceEEEEcCCCCcHHHHHHHHhc----CCCeEEEEeec
Confidence 357899999999999999999995 45667665543
No 387
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.98 E-value=0.31 Score=39.82 Aligned_cols=38 Identities=24% Similarity=0.232 Sum_probs=33.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
..+|+|.|.|.+|.+|+.++..|+ .+|+.|+.+.|+..
T Consensus 157 l~Gk~V~vIG~s~ivG~PmA~~L~-----~~gatVtv~~~~t~ 194 (301)
T PRK14194 157 LTGKHAVVIGRSNIVGKPMAALLL-----QAHCSVTVVHSRST 194 (301)
T ss_pred CCCCEEEEECCCCccHHHHHHHHH-----HCCCEEEEECCCCC
Confidence 467999999999999999999999 79999999976543
No 388
>cd05295 MDH_like Malate dehydrogenase-like. These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=91.96 E-value=1.1 Score=38.78 Aligned_cols=74 Identities=8% Similarity=-0.085 Sum_probs=46.2
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCC--CCCCCcEEEEEecCCCCC----------------CCC-------------CCcc
Q 030483 10 SVALIIGVTGISGLSLAEALKNPT--TPGSPWKVYGAARRPPPG----------------WFP-------------TALV 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~--~~~~g~~V~~l~R~~~~~----------------~~~-------------~~~v 58 (176)
-+|+||||+|.||.+|+..+.+-+ -.++...++.++..+... ... .+++
T Consensus 124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~~~~~ea~~daDvv 203 (452)
T cd05295 124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVTTDLDVAFKDAHVI 203 (452)
T ss_pred eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEEECCHHHhCCCCEE
Confidence 579999999999999999998300 000112245555521110 000 0111
Q ss_pred ----------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 ----------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 ----------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
..+....++.|+...+.+.+++.+.
T Consensus 204 Iitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~ 238 (452)
T cd05295 204 VLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKN 238 (452)
T ss_pred EECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 1245567899999999999999987
No 389
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=91.95 E-value=0.47 Score=31.02 Aligned_cols=34 Identities=24% Similarity=0.273 Sum_probs=28.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCC-CcEEEEEec
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGS-PWKVYGAAR 46 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~-g~~V~~l~R 46 (176)
...++++|.|. |.+|+.++..|. +. +.+|+.++|
T Consensus 21 ~~~~~v~i~G~-G~~g~~~a~~l~-----~~~~~~v~v~~r 55 (86)
T cd05191 21 LKGKTVVVLGA-GEVGKGIAKLLA-----DEGGKKVVLCDR 55 (86)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHH-----HcCCCEEEEEcC
Confidence 34678999998 999999999999 45 678888877
No 390
>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=91.94 E-value=1 Score=38.14 Aligned_cols=34 Identities=24% Similarity=0.218 Sum_probs=28.9
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
|+|-|.| +|++|--...-|. +.||+|++++..+.
T Consensus 1 MkI~viG-tGYVGLv~g~~lA-----~~GHeVv~vDid~~ 34 (414)
T COG1004 1 MKITVIG-TGYVGLVTGACLA-----ELGHEVVCVDIDES 34 (414)
T ss_pred CceEEEC-CchHHHHHHHHHH-----HcCCeEEEEeCCHH
Confidence 4788888 8999988888888 79999999987654
No 391
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=91.89 E-value=0.3 Score=39.53 Aligned_cols=35 Identities=17% Similarity=0.130 Sum_probs=30.7
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
++|.|.|+ |.+|+.++..|+ ..|++|+.+++++..
T Consensus 6 ~~V~ViGa-G~mG~~iA~~~a-----~~G~~V~l~d~~~~~ 40 (286)
T PRK07819 6 QRVGVVGA-GQMGAGIAEVCA-----RAGVDVLVFETTEEL 40 (286)
T ss_pred cEEEEEcc-cHHHHHHHHHHH-----hCCCEEEEEECCHHH
Confidence 47999986 999999999999 699999999987653
No 392
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=91.86 E-value=0.28 Score=39.49 Aligned_cols=36 Identities=22% Similarity=0.259 Sum_probs=31.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+.++||+||+|-+|..+++.+. ..|.+|+++++++
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~-----~~G~~vi~~~~s~ 178 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAK-----IKGCKVIGCAGSD 178 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHH-----HcCCEEEEEeCCH
Confidence 45789999999999999988888 6899999888764
No 393
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=91.82 E-value=0.28 Score=41.81 Aligned_cols=36 Identities=31% Similarity=0.417 Sum_probs=31.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+++++|+|+ |.+|+.+++.|. +.|++|+++++++.
T Consensus 230 ~~~~iiIiG~-G~~g~~l~~~L~-----~~~~~v~vid~~~~ 265 (453)
T PRK09496 230 PVKRVMIVGG-GNIGYYLAKLLE-----KEGYSVKLIERDPE 265 (453)
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-----hCCCeEEEEECCHH
Confidence 3578999998 999999999999 68999999987753
No 394
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=91.77 E-value=0.26 Score=40.11 Aligned_cols=35 Identities=14% Similarity=0.159 Sum_probs=30.2
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~ 49 (176)
.++||+||+|-+|..+++.+. ..|. +|++++++..
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk-----~~G~~~Vi~~~~s~~ 191 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGR-----LLGCSRVVGICGSDE 191 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHH-----HcCCCEEEEEcCCHH
Confidence 689999999999999998887 6898 7999887643
No 395
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=91.71 E-value=0.3 Score=39.41 Aligned_cols=34 Identities=18% Similarity=0.279 Sum_probs=29.8
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
++|.|.| .|.+|+.++..|+ ..|++|+++++++.
T Consensus 5 ~~V~vIG-~G~mG~~iA~~l~-----~~G~~V~~~d~~~~ 38 (295)
T PLN02545 5 KKVGVVG-AGQMGSGIAQLAA-----AAGMDVWLLDSDPA 38 (295)
T ss_pred CEEEEEC-CCHHHHHHHHHHH-----hcCCeEEEEeCCHH
Confidence 5799998 5999999999999 68999999998753
No 396
>COG0794 GutQ Predicted sugar phosphate isomerase involved in capsule formation [Cell envelope biogenesis, outer membrane]
Probab=91.71 E-value=1.8 Score=33.32 Aligned_cols=32 Identities=22% Similarity=0.360 Sum_probs=28.2
Q ss_pred CCeEEEEcC--ChHHHHHHHHHhhCCCCCCCCcEEEEEe
Q 030483 9 KSVALIIGV--TGISGLSLAEALKNPTTPGSPWKVYGAA 45 (176)
Q Consensus 9 ~~~vLVtGa--tGfiG~~l~~~L~~~~~~~~g~~V~~l~ 45 (176)
+.+|+|+|. ||+||+.++..|. .-|..++.+.
T Consensus 39 ~gkv~V~G~GkSG~Igkk~Aa~L~-----s~G~~a~fv~ 72 (202)
T COG0794 39 KGKVFVTGVGKSGLIGKKFAARLA-----STGTPAFFVG 72 (202)
T ss_pred CCcEEEEcCChhHHHHHHHHHHHH-----ccCCceEEec
Confidence 457999887 9999999999999 7999988776
No 397
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=91.69 E-value=0.29 Score=38.81 Aligned_cols=35 Identities=17% Similarity=0.115 Sum_probs=29.0
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCC---cEEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSP---WKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g---~~V~~l~R~~~ 49 (176)
+++|.|.| .|-+|+.++..|. ..| ++|++++|++.
T Consensus 2 mm~I~iIG-~G~mG~~la~~l~-----~~g~~~~~v~v~~r~~~ 39 (267)
T PRK11880 2 MKKIGFIG-GGNMASAIIGGLL-----ASGVPAKDIIVSDPSPE 39 (267)
T ss_pred CCEEEEEe-chHHHHHHHHHHH-----hCCCCcceEEEEcCCHH
Confidence 45799998 5999999999999 566 78999998753
No 398
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=91.68 E-value=0.51 Score=30.56 Aligned_cols=34 Identities=24% Similarity=0.296 Sum_probs=22.2
Q ss_pred CCeEEEEcCChHHHHH--HHHHhhCCCCCCCCcEEEEEecCC
Q 030483 9 KSVALIIGVTGISGLS--LAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~--l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.|+|||+|+|.-.|.+ ++..+- .|.+.+++....
T Consensus 39 pK~VLViGaStGyGLAsRIa~aFg------~gA~TiGV~fEk 74 (78)
T PF12242_consen 39 PKKVLVIGASTGYGLASRIAAAFG------AGADTIGVSFEK 74 (78)
T ss_dssp -SEEEEES-SSHHHHHHHHHHHHC------C--EEEEEE---
T ss_pred CceEEEEecCCcccHHHHHHHHhc------CCCCEEEEeecc
Confidence 4899999999888877 666665 777888887654
No 399
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=91.63 E-value=0.29 Score=39.77 Aligned_cols=33 Identities=30% Similarity=0.297 Sum_probs=29.2
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
++|.|.| .|-+|+.++..|. ..|++|+.++|++
T Consensus 2 mkI~iiG-~G~mG~~~a~~L~-----~~g~~V~~~~r~~ 34 (325)
T PRK00094 2 MKIAVLG-AGSWGTALAIVLA-----RNGHDVTLWARDP 34 (325)
T ss_pred CEEEEEC-CCHHHHHHHHHHH-----hCCCEEEEEECCH
Confidence 4799998 5899999999999 6899999999864
No 400
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=91.61 E-value=0.37 Score=39.53 Aligned_cols=33 Identities=30% Similarity=0.283 Sum_probs=29.1
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
++|.|.| .|-+|+.++..|. ..|++|+.++|++
T Consensus 5 m~I~iIG-~G~mG~~ia~~L~-----~~G~~V~~~~r~~ 37 (328)
T PRK14618 5 MRVAVLG-AGAWGTALAVLAA-----SKGVPVRLWARRP 37 (328)
T ss_pred CeEEEEC-cCHHHHHHHHHHH-----HCCCeEEEEeCCH
Confidence 3799997 6899999999999 6899999999964
No 401
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=91.59 E-value=0.25 Score=40.69 Aligned_cols=35 Identities=17% Similarity=0.144 Sum_probs=28.3
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+.+|||+||+|-+|+.+++-+. ..|+.+++.+.+.
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk-----~~G~~~v~~~~s~ 177 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAK-----ALGATVVAVVSSS 177 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHH-----HcCCcEEEEecCH
Confidence 6799999999999999999888 6886655555443
No 402
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=91.55 E-value=0.34 Score=39.00 Aligned_cols=34 Identities=15% Similarity=0.058 Sum_probs=29.7
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
++|.|.| +|.+|+.++..|. ..|++|+.+++++.
T Consensus 4 ~kIaViG-aG~mG~~iA~~la-----~~G~~V~l~d~~~~ 37 (287)
T PRK08293 4 KNVTVAG-AGVLGSQIAFQTA-----FHGFDVTIYDISDE 37 (287)
T ss_pred cEEEEEC-CCHHHHHHHHHHH-----hcCCeEEEEeCCHH
Confidence 5799998 5999999999999 68999999998753
No 403
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=91.39 E-value=0.33 Score=35.73 Aligned_cols=34 Identities=26% Similarity=0.295 Sum_probs=28.7
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
++|-+.| .|-.|+.+++.|+ ..||+|++.+|++.
T Consensus 2 ~~Ig~IG-lG~mG~~~a~~L~-----~~g~~v~~~d~~~~ 35 (163)
T PF03446_consen 2 MKIGFIG-LGNMGSAMARNLA-----KAGYEVTVYDRSPE 35 (163)
T ss_dssp BEEEEE---SHHHHHHHHHHH-----HTTTEEEEEESSHH
T ss_pred CEEEEEc-hHHHHHHHHHHHH-----hcCCeEEeeccchh
Confidence 5788888 5999999999999 79999999998754
No 404
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=91.33 E-value=0.42 Score=39.43 Aligned_cols=35 Identities=17% Similarity=0.154 Sum_probs=30.6
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
-++|.|.| +|.+|+.++..|+ ..|++|+.+++++.
T Consensus 7 i~~VaVIG-aG~MG~giA~~~a-----~aG~~V~l~D~~~~ 41 (321)
T PRK07066 7 IKTFAAIG-SGVIGSGWVARAL-----AHGLDVVAWDPAPG 41 (321)
T ss_pred CCEEEEEC-cCHHHHHHHHHHH-----hCCCeEEEEeCCHH
Confidence 46898998 5999999999999 69999999998753
No 405
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=91.30 E-value=0.36 Score=38.96 Aligned_cols=34 Identities=18% Similarity=0.315 Sum_probs=29.8
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
++|.|.| .|.+|+.++..|+ ..|++|+.+++++.
T Consensus 4 ~~I~ViG-aG~mG~~iA~~la-----~~G~~V~l~d~~~~ 37 (291)
T PRK06035 4 KVIGVVG-SGVMGQGIAQVFA-----RTGYDVTIVDVSEE 37 (291)
T ss_pred cEEEEEC-ccHHHHHHHHHHH-----hcCCeEEEEeCCHH
Confidence 5799998 5999999999999 68999999998753
No 406
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=91.25 E-value=0.38 Score=39.72 Aligned_cols=36 Identities=17% Similarity=0.170 Sum_probs=30.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+.++||+|++|-+|..+++.+. ..|.+|+++++++
T Consensus 158 ~g~~VlV~GaaG~vG~~aiqlAk-----~~G~~Vi~~~~~~ 193 (348)
T PLN03154 158 KGDSVFVSAASGAVGQLVGQLAK-----LHGCYVVGSAGSS 193 (348)
T ss_pred CCCEEEEecCccHHHHHHHHHHH-----HcCCEEEEEcCCH
Confidence 35789999999999999998887 6899999887654
No 407
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.24 E-value=0.46 Score=38.57 Aligned_cols=37 Identities=22% Similarity=0.156 Sum_probs=32.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
..+++++|+|+++.+|+.|+..|+ ..|..|+.+.++.
T Consensus 156 l~Gk~vvVIGrs~~VG~pla~lL~-----~~gatVtv~~s~t 192 (286)
T PRK14175 156 LEGKNAVVIGRSHIVGQPVSKLLL-----QKNASVTILHSRS 192 (286)
T ss_pred CCCCEEEEECCCchhHHHHHHHHH-----HCCCeEEEEeCCc
Confidence 457899999999999999999999 6889999887754
No 408
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=91.23 E-value=0.32 Score=38.99 Aligned_cols=34 Identities=18% Similarity=0.171 Sum_probs=29.4
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
++|.|.|+ |.+|..++..|+ ..|++|+.+++++.
T Consensus 4 ~kI~VIG~-G~mG~~ia~~la-----~~g~~V~~~d~~~~ 37 (282)
T PRK05808 4 QKIGVIGA-GTMGNGIAQVCA-----VAGYDVVMVDISDA 37 (282)
T ss_pred cEEEEEcc-CHHHHHHHHHHH-----HCCCceEEEeCCHH
Confidence 47889985 999999999999 68999999987653
No 409
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=91.20 E-value=0.46 Score=41.01 Aligned_cols=35 Identities=23% Similarity=0.265 Sum_probs=30.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+++|+|.|+ |.+|..+++.|. ..|++|+++++++
T Consensus 15 ~~~~v~viG~-G~~G~~~A~~L~-----~~G~~V~~~d~~~ 49 (480)
T PRK01438 15 QGLRVVVAGL-GVSGFAAADALL-----ELGARVTVVDDGD 49 (480)
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-----HCCCEEEEEeCCc
Confidence 4678999996 789999999998 7999999998654
No 410
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=91.19 E-value=0.24 Score=41.21 Aligned_cols=35 Identities=34% Similarity=0.279 Sum_probs=29.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~ 48 (176)
.+.+|+|.|+ |.+|++++..|. ..|. +++.+++..
T Consensus 23 ~~~~VlVvG~-GglGs~va~~La-----~aGvg~i~lvD~D~ 58 (339)
T PRK07688 23 REKHVLIIGA-GALGTANAEMLV-----RAGVGKVTIVDRDY 58 (339)
T ss_pred cCCcEEEECC-CHHHHHHHHHHH-----HcCCCeEEEEeCCc
Confidence 4678999997 779999999999 6888 688888753
No 411
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=91.07 E-value=0.42 Score=38.85 Aligned_cols=33 Identities=21% Similarity=0.167 Sum_probs=28.9
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
++|.|.|+ |.+|+.++..|+ ..|++|+.++++.
T Consensus 5 ~~I~vIGa-G~mG~~iA~~l~-----~~g~~V~~~d~~~ 37 (311)
T PRK06130 5 QNLAIIGA-GTMGSGIAALFA-----RKGLQVVLIDVME 37 (311)
T ss_pred cEEEEECC-CHHHHHHHHHHH-----hCCCeEEEEECCH
Confidence 57899974 999999999999 6899999998765
No 412
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=91.07 E-value=0.4 Score=37.89 Aligned_cols=36 Identities=19% Similarity=0.108 Sum_probs=31.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+.+++|+|++|-+|..+++.+. ..|++|+.++++.
T Consensus 139 ~~~~vlv~g~~~~ig~~~~~~~~-----~~g~~v~~~~~~~ 174 (323)
T cd05276 139 AGETVLIHGGASGVGTAAIQLAK-----ALGARVIATAGSE 174 (323)
T ss_pred CCCEEEEEcCcChHHHHHHHHHH-----HcCCEEEEEcCCH
Confidence 45789999999999999999998 6899998888753
No 413
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=91.02 E-value=0.38 Score=33.58 Aligned_cols=79 Identities=14% Similarity=0.172 Sum_probs=44.8
Q ss_pred CeEEEEcCC---hHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCCCC--CCCcccC---cHH-HHHHHHHHHHHHHHHHH
Q 030483 10 SVALIIGVT---GISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF--PTALVQE---SEE-VNIFKNSTMLKNVLSVL 80 (176)
Q Consensus 10 ~~vLVtGat---GfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~--~~~~v~~---~~~-~~~~~N~~~t~~ll~a~ 80 (176)
|++.|.|+| +-.|..+++.|. +.|++|+.+.-+...-.. ..+.+.+ ..+ ..+-++..-+..+++.|
T Consensus 1 ksiAVvGaS~~~~~~g~~v~~~l~-----~~G~~v~~Vnp~~~~i~G~~~y~sl~e~p~~iDlavv~~~~~~~~~~v~~~ 75 (116)
T PF13380_consen 1 KSIAVVGASDNPGKFGYRVLRNLK-----AAGYEVYPVNPKGGEILGIKCYPSLAEIPEPIDLAVVCVPPDKVPEIVDEA 75 (116)
T ss_dssp -EEEEET--SSTTSHHHHHHHHHH-----HTT-EEEEESTTCSEETTEE-BSSGGGCSST-SEEEE-S-HHHHHHHHHHH
T ss_pred CEEEEEcccCCCCChHHHHHHHHH-----hCCCEEEEECCCceEECcEEeeccccCCCCCCCEEEEEcCHHHHHHHHHHH
Confidence 578999997 778999999999 699999998655432110 0011111 111 11234445556788888
Q ss_pred HhcCCCCCCccEEEEecc
Q 030483 81 VSSNSGRSRLRHVALLTG 98 (176)
Q Consensus 81 ~~~~~~~~~v~~vv~~Ss 98 (176)
.+. +++.+++.+|
T Consensus 76 ~~~-----g~~~v~~~~g 88 (116)
T PF13380_consen 76 AAL-----GVKAVWLQPG 88 (116)
T ss_dssp HHH-----T-SEEEE-TT
T ss_pred HHc-----CCCEEEEEcc
Confidence 877 5788887764
No 414
>PRK07236 hypothetical protein; Provisional
Probab=91.02 E-value=0.42 Score=39.92 Aligned_cols=37 Identities=30% Similarity=0.414 Sum_probs=31.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
|+.++|+|.|| |..|..++..|. ..|++|+.+.|.+.
T Consensus 4 ~~~~~ViIVGa-G~aGl~~A~~L~-----~~G~~v~v~E~~~~ 40 (386)
T PRK07236 4 MSGPRAVVIGG-SLGGLFAALLLR-----RAGWDVDVFERSPT 40 (386)
T ss_pred CCCCeEEEECC-CHHHHHHHHHHH-----hCCCCEEEEecCCC
Confidence 45578999995 899999999999 68999999998763
No 415
>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form. This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.
Probab=90.88 E-value=0.44 Score=39.14 Aligned_cols=32 Identities=25% Similarity=0.379 Sum_probs=26.5
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEe
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAA 45 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~ 45 (176)
.+|.|.||||+.|..|++.|.. ....++..+.
T Consensus 2 ~~v~IvGasGy~G~el~rlL~~----HP~~el~~l~ 33 (310)
T TIGR01851 2 PKVFIDGEAGTTGLQIRERLSG----RDDIELLSIA 33 (310)
T ss_pred CeEEEECCCChhHHHHHHHHhC----CCCeEEEEEe
Confidence 4799999999999999999995 4556766665
No 416
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=90.85 E-value=0.43 Score=38.81 Aligned_cols=36 Identities=33% Similarity=0.454 Sum_probs=31.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+++++|+|. |-+|+.++..|. ..|.+|++.+|++.
T Consensus 151 ~g~kvlViG~-G~iG~~~a~~L~-----~~Ga~V~v~~r~~~ 186 (296)
T PRK08306 151 HGSNVLVLGF-GRTGMTLARTLK-----ALGANVTVGARKSA 186 (296)
T ss_pred CCCEEEEECC-cHHHHHHHHHHH-----HCCCEEEEEECCHH
Confidence 4689999996 779999999999 68999999999854
No 417
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=90.85 E-value=0.42 Score=37.91 Aligned_cols=36 Identities=17% Similarity=0.200 Sum_probs=31.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+++++|+|++|.+|..+++.+. ..|.+|+.++++.
T Consensus 144 ~g~~vlI~g~~~~~g~~~~~~a~-----~~g~~v~~~~~~~ 179 (325)
T cd08253 144 AGETVLVHGGSGAVGHAAVQLAR-----WAGARVIATASSA 179 (325)
T ss_pred CCCEEEEEcCCchHHHHHHHHHH-----HcCCEEEEEeCCH
Confidence 45789999999999999999998 6889999988754
No 418
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=90.59 E-value=0.19 Score=38.52 Aligned_cols=34 Identities=18% Similarity=0.078 Sum_probs=28.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARR 47 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~ 47 (176)
.+++|+|.|+. -+|+.++..|. ..|+ +++.++++
T Consensus 20 ~~~~V~IvG~G-glGs~ia~~La-----~~Gvg~i~lvD~D 54 (200)
T TIGR02354 20 EQATVAICGLG-GLGSNVAINLA-----RAGIGKLILVDFD 54 (200)
T ss_pred hCCcEEEECcC-HHHHHHHHHHH-----HcCCCEEEEECCC
Confidence 56789999975 49999999999 6898 58888876
No 419
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=90.58 E-value=0.3 Score=40.54 Aligned_cols=36 Identities=31% Similarity=0.221 Sum_probs=29.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~ 48 (176)
..+++|+|.|+.| +|+++++.|. ..|+ +++.++++.
T Consensus 22 L~~~~VlIiG~Gg-lGs~va~~La-----~aGvg~i~lvD~D~ 58 (338)
T PRK12475 22 IREKHVLIVGAGA-LGAANAEALV-----RAGIGKLTIADRDY 58 (338)
T ss_pred hcCCcEEEECCCH-HHHHHHHHHH-----HcCCCEEEEEcCCc
Confidence 3567899999755 9999999999 6887 677777764
No 420
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=90.57 E-value=0.42 Score=39.25 Aligned_cols=68 Identities=18% Similarity=0.198 Sum_probs=47.3
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCc--EEEEEecCCCCC---------C-------CCC----------Ccc----
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPPPG---------W-------FPT----------ALV---- 58 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~~~---------~-------~~~----------~~v---- 58 (176)
||.|+|++|.||++++..|+ ..+. ++..+++.+... . ... +.+
T Consensus 1 KV~IiGaaG~VG~~~a~~l~-----~~~~~~elvL~Di~~a~g~a~DL~~~~~~~~i~~~~~~~~~~~~~~daDivvita 75 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLK-----LQPYVSELSLYDIAGAAGVAADLSHIPTAASVKGFSGEEGLENALKGADVVVIPA 75 (312)
T ss_pred CEEEECCCCHHHHHHHHHHH-----hCCCCcEEEEecCCCCcEEEchhhcCCcCceEEEecCCCchHHHcCCCCEEEEeC
Confidence 58899999999999999998 3454 677777654210 0 000 111
Q ss_pred ------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 ------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 ------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
..+..+.+..|....+.+.+.+.+.
T Consensus 76 G~~~~~g~~R~dll~~N~~I~~~i~~~i~~~ 106 (312)
T TIGR01772 76 GVPRKPGMTRDDLFNVNAGIVKDLVAAVAES 106 (312)
T ss_pred CCCCCCCccHHHHHHHhHHHHHHHHHHHHHh
Confidence 1244567889999999999999887
No 421
>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=90.56 E-value=0.38 Score=40.45 Aligned_cols=33 Identities=12% Similarity=0.143 Sum_probs=26.1
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcE---EEEEec
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWK---VYGAAR 46 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~---V~~l~R 46 (176)
++|-|.||||++|+.|++.|++ +..++ ++.++.
T Consensus 2 ~~VAIVGATG~vG~ell~llL~----~~~f~~~~l~~~ss 37 (369)
T PRK06598 2 KKVGFVGWRGMVGSVLMQRMVE----ENDFDLIEPVFFST 37 (369)
T ss_pred eEEEEEeCCCHHHHHHHHHHHh----CCCCCcCcEEEecc
Confidence 5799999999999999996664 56776 555554
No 422
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=90.50 E-value=0.45 Score=36.77 Aligned_cols=35 Identities=29% Similarity=0.411 Sum_probs=30.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+.++||+|+++ +|..+++.+. ..|.+|+++++++
T Consensus 134 ~~~~vli~g~~~-~G~~~~~~a~-----~~g~~v~~~~~~~ 168 (271)
T cd05188 134 PGDTVLVLGAGG-VGLLAAQLAK-----AAGARVIVTDRSD 168 (271)
T ss_pred CCCEEEEECCCH-HHHHHHHHHH-----HcCCeEEEEcCCH
Confidence 356899999999 9999998888 6889999998864
No 423
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=90.48 E-value=0.2 Score=38.42 Aligned_cols=36 Identities=28% Similarity=0.172 Sum_probs=28.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~ 48 (176)
..+.+|+|.|+ |-+|+++++.|. ..|. +++.+++..
T Consensus 19 l~~~~VlviG~-GglGs~ia~~La-----~~Gv~~i~lvD~d~ 55 (202)
T TIGR02356 19 LLNSHVLIIGA-GGLGSPAALYLA-----GAGVGTIVIVDDDH 55 (202)
T ss_pred hcCCCEEEECC-CHHHHHHHHHHH-----HcCCCeEEEecCCE
Confidence 35678999995 459999999999 6887 688887753
No 424
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=90.24 E-value=0.48 Score=38.62 Aligned_cols=34 Identities=24% Similarity=0.094 Sum_probs=29.4
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.|+|+|.|+ |-||+.++-.|. +.|++|+.++|+.
T Consensus 2 ~m~I~IiGa-GaiG~~~a~~L~-----~~G~~V~lv~r~~ 35 (305)
T PRK05708 2 SMTWHILGA-GSLGSLWACRLA-----RAGLPVRLILRDR 35 (305)
T ss_pred CceEEEECC-CHHHHHHHHHHH-----hCCCCeEEEEech
Confidence 468999996 669999999999 6899999999964
No 425
>PRK00711 D-amino acid dehydrogenase small subunit; Validated
Probab=90.21 E-value=0.52 Score=39.57 Aligned_cols=33 Identities=24% Similarity=0.380 Sum_probs=29.2
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|+|+|.| .|++|..++.+|. ..|++|..+.|..
T Consensus 1 ~~v~IVG-~Gi~Gls~A~~l~-----~~g~~V~vle~~~ 33 (416)
T PRK00711 1 MRVVVLG-SGVIGVTSAWYLA-----QAGHEVTVIDRQP 33 (416)
T ss_pred CEEEEEC-CcHHHHHHHHHHH-----HCCCEEEEEeCCC
Confidence 3689999 4999999999999 6899999999974
No 426
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=90.18 E-value=0.44 Score=38.39 Aligned_cols=31 Identities=19% Similarity=0.185 Sum_probs=27.5
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEec
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAAR 46 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R 46 (176)
|+|+|.| .|-+|..++..|. +.|++|+.++|
T Consensus 1 mkI~IiG-~G~iG~~~a~~L~-----~~g~~V~~~~r 31 (305)
T PRK12921 1 MRIAVVG-AGAVGGTFGGRLL-----EAGRDVTFLVR 31 (305)
T ss_pred CeEEEEC-CCHHHHHHHHHHH-----HCCCceEEEec
Confidence 4789997 6889999999999 68999999998
No 427
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=90.18 E-value=0.55 Score=37.32 Aligned_cols=36 Identities=19% Similarity=0.272 Sum_probs=31.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
...+++|+|++|-+|..+++.+. ..|++|+.++++.
T Consensus 144 ~~~~vli~g~~~~~g~~~~~~~~-----~~g~~v~~~~~~~ 179 (328)
T cd08268 144 PGDSVLITAASSSVGLAAIQIAN-----AAGATVIATTRTS 179 (328)
T ss_pred CCCEEEEecCccHHHHHHHHHHH-----HcCCEEEEEcCCH
Confidence 34689999999999999999998 7899999888764
No 428
>COG0665 DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]
Probab=90.16 E-value=0.54 Score=38.89 Aligned_cols=37 Identities=32% Similarity=0.223 Sum_probs=31.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
++++.|+|.| .|++|...+-+|. ..|++|+.+.+...
T Consensus 2 ~~~~~vvVIG-gGi~Gls~A~~La-----~~G~~V~vie~~~~ 38 (387)
T COG0665 2 SMKMDVVIIG-GGIVGLSAAYYLA-----ERGADVTVLEAGEA 38 (387)
T ss_pred CCcceEEEEC-CcHHHHHHHHHHH-----HcCCEEEEEecCcc
Confidence 3567899999 8999999999999 69999999987654
No 429
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=90.15 E-value=0.52 Score=37.91 Aligned_cols=36 Identities=19% Similarity=0.257 Sum_probs=31.2
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
..++||.|++|.+|..+++.+. ..|.+|+++++++.
T Consensus 147 ~~~vlI~g~~g~vg~~~~~~a~-----~~g~~v~~~~~~~~ 182 (326)
T cd08289 147 QGPVLVTGATGGVGSLAVSILA-----KLGYEVVASTGKAD 182 (326)
T ss_pred CCEEEEEcCCchHHHHHHHHHH-----HCCCeEEEEecCHH
Confidence 4689999999999999988888 68999998887653
No 430
>PRK11259 solA N-methyltryptophan oxidase; Provisional
Probab=90.14 E-value=0.53 Score=38.85 Aligned_cols=34 Identities=26% Similarity=0.314 Sum_probs=29.3
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
-.|+|.| .|.+|..++.+|. +.|++|+.+.|...
T Consensus 4 ~dv~IIG-gGi~G~s~A~~L~-----~~g~~V~lie~~~~ 37 (376)
T PRK11259 4 YDVIVIG-LGSMGSAAGYYLA-----RRGLRVLGLDRFMP 37 (376)
T ss_pred ccEEEEC-CCHHHHHHHHHHH-----HCCCeEEEEecccC
Confidence 4588888 4999999999999 68999999998753
No 431
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=90.07 E-value=1.8 Score=35.57 Aligned_cols=71 Identities=18% Similarity=0.227 Sum_probs=47.7
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC------------CCCC---------------Ccc---
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------------WFPT---------------ALV--- 58 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------------~~~~---------------~~v--- 58 (176)
++||.|+|+ |.+|+.++..|+. ....-++..++...... .... +.+
T Consensus 3 ~~Ki~IiGa-G~VG~~~a~~l~~---~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy~~~~~adivvit 78 (312)
T cd05293 3 RNKVTVVGV-GQVGMACAISILA---KGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDYSVTANSKVVIVT 78 (312)
T ss_pred CCEEEEECC-CHHHHHHHHHHHh---cCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCHHHhCCCCEEEEC
Confidence 468999996 9999999999983 02223688888654321 0000 111
Q ss_pred -------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 -------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 -------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
..+....+..|....+.+.+.+.+.
T Consensus 79 aG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~ 110 (312)
T cd05293 79 AGARQNEGESRLDLVQRNVDIFKGIIPKLVKY 110 (312)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 1244567889999999999998887
No 432
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=90.01 E-value=0.95 Score=32.78 Aligned_cols=37 Identities=24% Similarity=0.355 Sum_probs=32.4
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 6 ~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
+..+++++|.|.+..+|..|+..|. .+|..|+...++
T Consensus 25 ~~~gk~v~VvGrs~~vG~pla~lL~-----~~gatV~~~~~~ 61 (140)
T cd05212 25 RLDGKKVLVVGRSGIVGAPLQCLLQ-----RDGATVYSCDWK 61 (140)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEeCCC
Confidence 3468999999999999999999999 689999888654
No 433
>PRK07679 pyrroline-5-carboxylate reductase; Reviewed
Probab=89.93 E-value=0.64 Score=37.26 Aligned_cols=34 Identities=12% Similarity=0.078 Sum_probs=28.5
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCC----cEEEEEecCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSP----WKVYGAARRP 48 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g----~~V~~l~R~~ 48 (176)
.++|.+.| .|-+|+++++.|+ ..| ++|+..+|++
T Consensus 3 ~mkI~~IG-~G~mG~aia~~l~-----~~g~~~~~~v~v~~r~~ 40 (279)
T PRK07679 3 IQNISFLG-AGSIAEAIIGGLL-----HANVVKGEQITVSNRSN 40 (279)
T ss_pred CCEEEEEC-ccHHHHHHHHHHH-----HCCCCCcceEEEECCCC
Confidence 35799998 8999999999999 465 7888888865
No 434
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=89.92 E-value=0.73 Score=39.40 Aligned_cols=35 Identities=17% Similarity=0.187 Sum_probs=29.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
..++++|+|+. -+|.++++.|. +.|++|.+.+..+
T Consensus 4 ~~~~~~v~G~g-~~G~~~a~~l~-----~~g~~v~~~d~~~ 38 (445)
T PRK04308 4 QNKKILVAGLG-GTGISMIAYLR-----KNGAEVAAYDAEL 38 (445)
T ss_pred CCCEEEEECCC-HHHHHHHHHHH-----HCCCEEEEEeCCC
Confidence 45789999985 59999999998 7999999988654
No 435
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=89.72 E-value=0.75 Score=38.42 Aligned_cols=28 Identities=21% Similarity=0.407 Sum_probs=23.6
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcE
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWK 40 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~ 40 (176)
..+|.|.||||++|+.|++.|.+ +..++
T Consensus 5 ~~~VaIvGATG~vG~ell~lL~~----h~~f~ 32 (347)
T PRK06728 5 GYHVAVVGATGAVGQKIIELLEK----ETKFN 32 (347)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHH----CCCCC
Confidence 36899999999999999999983 35666
No 436
>PLN02712 arogenate dehydrogenase
Probab=89.71 E-value=0.62 Score=42.27 Aligned_cols=35 Identities=26% Similarity=0.242 Sum_probs=31.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
++++|.|.| .|-+|+++++.|. ..|++|++++|+.
T Consensus 368 ~~~kIgIIG-lG~mG~slA~~L~-----~~G~~V~~~dr~~ 402 (667)
T PLN02712 368 SKLKIAIVG-FGNFGQFLAKTMV-----KQGHTVLAYSRSD 402 (667)
T ss_pred CCCEEEEEe-cCHHHHHHHHHHH-----HCcCEEEEEECCh
Confidence 467899999 8999999999999 6889999999874
No 437
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=89.57 E-value=0.77 Score=34.47 Aligned_cols=36 Identities=17% Similarity=0.209 Sum_probs=30.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
...+|+|-||-|-+|++.++.+. .++|-|..++-..
T Consensus 2 sagrVivYGGkGALGSacv~~Fk-----annywV~siDl~e 37 (236)
T KOG4022|consen 2 SAGRVIVYGGKGALGSACVEFFK-----ANNYWVLSIDLSE 37 (236)
T ss_pred CCceEEEEcCcchHhHHHHHHHH-----hcCeEEEEEeecc
Confidence 45689999999999999999999 7899887776543
No 438
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=89.56 E-value=0.72 Score=40.13 Aligned_cols=36 Identities=17% Similarity=0.136 Sum_probs=30.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
..+++++|+|+ |-+|++++..|. ..|++|+..+|+.
T Consensus 330 ~~~k~vlIiGa-GgiG~aia~~L~-----~~G~~V~i~~R~~ 365 (477)
T PRK09310 330 LNNQHVAIVGA-GGAAKAIATTLA-----RAGAELLIFNRTK 365 (477)
T ss_pred cCCCEEEEEcC-cHHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 35678999996 789999999999 6889998887753
No 439
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=89.53 E-value=0.22 Score=35.52 Aligned_cols=34 Identities=35% Similarity=0.386 Sum_probs=26.7
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEe
Q 030483 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAA 45 (176)
Q Consensus 6 ~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~ 45 (176)
+...++|-|.|+ |-+|.+|.+.|. ..||+|.++.
T Consensus 7 ~~~~l~I~iIGa-GrVG~~La~aL~-----~ag~~v~~v~ 40 (127)
T PF10727_consen 7 QAARLKIGIIGA-GRVGTALARALA-----RAGHEVVGVY 40 (127)
T ss_dssp -----EEEEECT-SCCCCHHHHHHH-----HTTSEEEEES
T ss_pred CCCccEEEEECC-CHHHHHHHHHHH-----HCCCeEEEEE
Confidence 345679999997 999999999999 7999998875
No 440
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=89.51 E-value=0.7 Score=38.24 Aligned_cols=36 Identities=25% Similarity=0.252 Sum_probs=31.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.++++.|.| .|-||+.+++.|. ..|++|++.+|.+.
T Consensus 145 ~g~~VgIIG-~G~IG~~vA~~L~-----~~G~~V~~~d~~~~ 180 (330)
T PRK12480 145 KNMTVAIIG-TGRIGAATAKIYA-----GFGATITAYDAYPN 180 (330)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHH-----hCCCEEEEEeCChh
Confidence 467899998 6999999999999 79999999998753
No 441
>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated
Probab=89.46 E-value=0.79 Score=38.37 Aligned_cols=35 Identities=17% Similarity=0.199 Sum_probs=30.0
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
+|+|||+|+ |.+|+.++..+. ..|++|+.++..+.
T Consensus 12 ~~~ilIiG~-g~~~~~~~~a~~-----~~G~~v~~~~~~~~ 46 (395)
T PRK09288 12 ATRVMLLGS-GELGKEVAIEAQ-----RLGVEVIAVDRYAN 46 (395)
T ss_pred CCEEEEECC-CHHHHHHHHHHH-----HCCCEEEEEeCCCC
Confidence 568999985 689999999998 68999999988754
No 442
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=89.41 E-value=0.73 Score=32.95 Aligned_cols=32 Identities=19% Similarity=0.336 Sum_probs=26.2
Q ss_pred EEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEec
Q 030483 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAAR 46 (176)
Q Consensus 12 vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R 46 (176)
|.|.|+||-||+..++-+.++ .+.|+|++++=
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~---~d~f~v~~Lsa 32 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKH---PDKFEVVALSA 32 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHC---TTTEEEEEEEE
T ss_pred CEEEcCCcHHHHHHHHHHHhC---CCceEEEEEEc
Confidence 579999999999999888741 45699999875
No 443
>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent. This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.
Probab=89.38 E-value=2.6 Score=35.76 Aligned_cols=21 Identities=19% Similarity=0.170 Sum_probs=19.9
Q ss_pred CeEEEEcCChHHHHHHHHHhh
Q 030483 10 SVALIIGVTGISGLSLAEALK 30 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~ 30 (176)
-||.|+|++|.+|++++..|.
T Consensus 45 ~KV~IIGAaG~VG~~~A~~l~ 65 (387)
T TIGR01757 45 VNVAVSGAAGMISNHLLFMLA 65 (387)
T ss_pred eEEEEECCCcHHHHHHHHHHH
Confidence 589999999999999999998
No 444
>PRK13243 glyoxylate reductase; Reviewed
Probab=89.37 E-value=0.7 Score=38.26 Aligned_cols=36 Identities=25% Similarity=0.231 Sum_probs=31.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.++++.|.|- |-||+.+++.|. .-|.+|++++|.+.
T Consensus 149 ~gktvgIiG~-G~IG~~vA~~l~-----~~G~~V~~~d~~~~ 184 (333)
T PRK13243 149 YGKTIGIIGF-GRIGQAVARRAK-----GFGMRILYYSRTRK 184 (333)
T ss_pred CCCEEEEECc-CHHHHHHHHHHH-----HCCCEEEEECCCCC
Confidence 5789999995 999999999999 79999999998653
No 445
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=89.25 E-value=0.68 Score=37.08 Aligned_cols=36 Identities=19% Similarity=0.103 Sum_probs=31.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+.+++|+|+++-+|..+++.+. ..|++|+.++++.
T Consensus 166 ~~~~vlI~g~~~~iG~~~~~~~~-----~~g~~v~~~~~~~ 201 (342)
T cd08266 166 PGETVLVHGAGSGVGSAAIQIAK-----LFGATVIATAGSE 201 (342)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HcCCEEEEEeCCH
Confidence 35689999999999999999998 7899998888764
No 446
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=89.18 E-value=0.85 Score=33.56 Aligned_cols=34 Identities=26% Similarity=0.194 Sum_probs=28.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 47 (176)
.+++|+|.|| |-+|...++.|+ +.|++|+.++..
T Consensus 12 ~~~~vlVvGG-G~va~rka~~Ll-----~~ga~V~VIsp~ 45 (157)
T PRK06719 12 HNKVVVIIGG-GKIAYRKASGLK-----DTGAFVTVVSPE 45 (157)
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-----hCCCEEEEEcCc
Confidence 4789999995 779999999999 799999988643
No 447
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=89.15 E-value=0.52 Score=40.03 Aligned_cols=33 Identities=30% Similarity=0.352 Sum_probs=29.2
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
+|.|.| .|.+|..++..|. +.|++|+++++++.
T Consensus 2 kI~vIG-lG~~G~~lA~~La-----~~G~~V~~~d~~~~ 34 (411)
T TIGR03026 2 KIAVIG-LGYVGLPLAALLA-----DLGHEVTGVDIDQE 34 (411)
T ss_pred EEEEEC-CCchhHHHHHHHH-----hcCCeEEEEECCHH
Confidence 688887 7999999999999 79999999998754
No 448
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=89.12 E-value=0.64 Score=37.43 Aligned_cols=36 Identities=19% Similarity=0.226 Sum_probs=31.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+.++||.|++|.+|..+++.+. ..|.+|+.+++++
T Consensus 145 ~~~~vlI~g~~g~ig~~~~~~a~-----~~G~~vi~~~~~~ 180 (329)
T cd05288 145 PGETVVVSAAAGAVGSVVGQIAK-----LLGARVVGIAGSD 180 (329)
T ss_pred CCCEEEEecCcchHHHHHHHHHH-----HcCCEEEEEeCCH
Confidence 35789999999999999999888 6899999888754
No 449
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=89.04 E-value=0.26 Score=37.71 Aligned_cols=35 Identities=23% Similarity=0.211 Sum_probs=28.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcE-EEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~-V~~l~R~~ 48 (176)
.+.+|+|.|++| +|+++++.|. ..|.. ++.++...
T Consensus 18 ~~s~VlviG~gg-lGsevak~L~-----~~GVg~i~lvD~d~ 53 (198)
T cd01485 18 RSAKVLIIGAGA-LGAEIAKNLV-----LAGIDSITIVDHRL 53 (198)
T ss_pred hhCcEEEECCCH-HHHHHHHHHH-----HcCCCEEEEEECCc
Confidence 467899999988 9999999999 67875 77777653
No 450
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=88.93 E-value=0.72 Score=37.18 Aligned_cols=36 Identities=17% Similarity=0.173 Sum_probs=30.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+.+++|.|++|-+|..+++.+. ..|.+|+.+++++
T Consensus 139 ~~~~vlI~ga~g~ig~~~~~~a~-----~~g~~v~~~~~~~ 174 (329)
T cd08250 139 SGETVLVTAAAGGTGQFAVQLAK-----LAGCHVIGTCSSD 174 (329)
T ss_pred CCCEEEEEeCccHHHHHHHHHHH-----HcCCeEEEEeCcH
Confidence 35789999999999999888888 6899999988764
No 451
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=88.92 E-value=0.73 Score=36.54 Aligned_cols=36 Identities=19% Similarity=0.135 Sum_probs=31.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+.+++|+|++|-+|..+++.+. ..|.+|+.+.++.
T Consensus 139 ~~~~vlv~g~~~~~g~~~~~~a~-----~~g~~v~~~~~~~ 174 (325)
T TIGR02824 139 AGETVLIHGGASGIGTTAIQLAK-----AFGARVFTTAGSD 174 (325)
T ss_pred CCCEEEEEcCcchHHHHHHHHHH-----HcCCEEEEEeCCH
Confidence 35789999999999999988888 7899999888754
No 452
>PRK06223 malate dehydrogenase; Reviewed
Probab=88.82 E-value=0.89 Score=36.91 Aligned_cols=34 Identities=26% Similarity=0.129 Sum_probs=28.4
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~ 49 (176)
+||.|+|+ |.+|+.++..|. ..|. +|+.+++...
T Consensus 3 ~KI~VIGa-G~vG~~ia~~la-----~~~~~ev~L~D~~~~ 37 (307)
T PRK06223 3 KKISIIGA-GNVGATLAHLLA-----LKELGDVVLFDIVEG 37 (307)
T ss_pred CEEEEECC-CHHHHHHHHHHH-----hCCCeEEEEEECCCc
Confidence 58999998 999999999998 4554 8999988543
No 453
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=88.77 E-value=0.25 Score=37.74 Aligned_cols=36 Identities=25% Similarity=0.224 Sum_probs=28.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcE-EEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~-V~~l~R~~ 48 (176)
..+.+|||.|+.| +|+++++.|. ..|.. ++.++...
T Consensus 19 L~~s~VlIiG~gg-lG~evak~La-----~~GVg~i~lvD~d~ 55 (197)
T cd01492 19 LRSARILLIGLKG-LGAEIAKNLV-----LSGIGSLTILDDRT 55 (197)
T ss_pred HHhCcEEEEcCCH-HHHHHHHHHH-----HcCCCEEEEEECCc
Confidence 3467899999877 9999999999 68875 77776553
No 454
>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids
Probab=88.71 E-value=1.1 Score=35.08 Aligned_cols=36 Identities=22% Similarity=0.121 Sum_probs=31.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+++++++|.| .|-+|+++++.|. +.|..|++++.+.
T Consensus 29 l~~~~v~I~G-~G~VG~~~a~~L~-----~~g~~vv~v~D~~ 64 (227)
T cd01076 29 LAGARVAIQG-FGNVGSHAARFLH-----EAGAKVVAVSDSD 64 (227)
T ss_pred ccCCEEEEEC-CCHHHHHHHHHHH-----HCCCEEEEEECCC
Confidence 5678999998 7999999999999 7899999887664
No 455
>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=88.70 E-value=0.76 Score=37.62 Aligned_cols=32 Identities=28% Similarity=0.240 Sum_probs=28.4
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+|.|.|+ |-+|++++..|. +.|++|..++|+.
T Consensus 2 kI~IiGa-Ga~G~ala~~L~-----~~g~~V~l~~r~~ 33 (326)
T PRK14620 2 KISILGA-GSFGTAIAIALS-----SKKISVNLWGRNH 33 (326)
T ss_pred EEEEECc-CHHHHHHHHHHH-----HCCCeEEEEecCH
Confidence 6899996 889999999999 6899999999864
No 456
>PRK06753 hypothetical protein; Provisional
Probab=88.62 E-value=0.77 Score=37.93 Aligned_cols=34 Identities=29% Similarity=0.345 Sum_probs=30.0
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
++|+|.|| |..|..++..|. ..|++|+.+.|++.
T Consensus 1 ~~V~IvGg-G~aGl~~A~~L~-----~~g~~v~v~E~~~~ 34 (373)
T PRK06753 1 MKIAIIGA-GIGGLTAAALLQ-----EQGHEVKVFEKNES 34 (373)
T ss_pred CEEEEECC-CHHHHHHHHHHH-----hCCCcEEEEecCCc
Confidence 47999996 899999999999 69999999998764
No 457
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=88.52 E-value=0.78 Score=40.04 Aligned_cols=34 Identities=24% Similarity=0.138 Sum_probs=29.6
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
++|.|.| +|.+|+.++..|+ ..|++|+++++++.
T Consensus 5 ~kIavIG-~G~MG~~iA~~la-----~~G~~V~v~D~~~~ 38 (495)
T PRK07531 5 MKAACIG-GGVIGGGWAARFL-----LAGIDVAVFDPHPE 38 (495)
T ss_pred CEEEEEC-cCHHHHHHHHHHH-----hCCCeEEEEeCCHH
Confidence 5788886 8999999999999 68999999998753
No 458
>PRK11749 dihydropyrimidine dehydrogenase subunit A; Provisional
Probab=88.51 E-value=0.82 Score=39.26 Aligned_cols=36 Identities=25% Similarity=0.293 Sum_probs=31.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+++|+|.|| |+.|...+..|. ..|++|+.+.+.+.
T Consensus 139 ~~~~VvIIGg-GpaGl~aA~~l~-----~~g~~V~lie~~~~ 174 (457)
T PRK11749 139 TGKKVAVIGA-GPAGLTAAHRLA-----RKGYDVTIFEARDK 174 (457)
T ss_pred CCCcEEEECC-CHHHHHHHHHHH-----hCCCeEEEEccCCC
Confidence 4578999997 999999999999 68999999988753
No 459
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=88.49 E-value=1.4 Score=35.97 Aligned_cols=35 Identities=20% Similarity=0.241 Sum_probs=28.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcE-EEEEecC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAARR 47 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~-V~~l~R~ 47 (176)
++.+|+|-|.+|-+|+.+.+.|+ +.|++ |+.+..+
T Consensus 7 ~~~~~~v~~~~~~~g~~~l~~l~-----~~g~~~v~pVnp~ 42 (291)
T PRK05678 7 KDTKVIVQGITGKQGTFHTEQML-----AYGTNIVGGVTPG 42 (291)
T ss_pred CCCeEEEeCCCchHHHHHHHHHH-----HCCCCEEEEECCC
Confidence 46789999999999999999999 56775 4455554
No 460
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=88.46 E-value=0.86 Score=38.90 Aligned_cols=37 Identities=30% Similarity=0.205 Sum_probs=30.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCC-cEEEEEecCCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRPP 49 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~~ 49 (176)
..+++++|.|+ |-+|..+++.|. ..| .+|+.++|+..
T Consensus 178 l~~~~VlViGa-G~iG~~~a~~L~-----~~G~~~V~v~~rs~~ 215 (417)
T TIGR01035 178 LKGKKALLIGA-GEMGELVAKHLL-----RKGVGKILIANRTYE 215 (417)
T ss_pred ccCCEEEEECC-hHHHHHHHHHHH-----HCCCCEEEEEeCCHH
Confidence 34678999996 999999999999 577 67999988753
No 461
>PTZ00318 NADH dehydrogenase-like protein; Provisional
Probab=88.39 E-value=1.1 Score=38.03 Aligned_cols=38 Identities=18% Similarity=0.275 Sum_probs=30.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
+.+++|+|.| .||-|-.++++|. ..+++|+.+++++..
T Consensus 8 ~~~~~vVIvG-gG~aGl~~a~~L~-----~~~~~ItlI~~~~~~ 45 (424)
T PTZ00318 8 LKKPNVVVLG-TGWAGAYFVRNLD-----PKKYNITVISPRNHM 45 (424)
T ss_pred CCCCeEEEEC-CCHHHHHHHHHhC-----cCCCeEEEEcCCCCc
Confidence 4567899998 5899999999997 567899999877643
No 462
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=88.36 E-value=1.5 Score=35.55 Aligned_cols=31 Identities=19% Similarity=0.307 Sum_probs=26.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEE
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYG 43 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~ 43 (176)
.+.+|||-|.||.+|+.+.+.|+ ..|++++.
T Consensus 5 ~~~~~~~~g~~~~~~~~~~~~~~-----~~g~~~v~ 35 (286)
T TIGR01019 5 KDTKVIVQGITGSQGSFHTEQML-----AYGTNIVG 35 (286)
T ss_pred CCCcEEEecCCcHHHHHHHHHHH-----hCCCCEEE
Confidence 45689999999999999999999 67777443
No 463
>PRK11728 hydroxyglutarate oxidase; Provisional
Probab=88.27 E-value=0.81 Score=38.33 Aligned_cols=33 Identities=30% Similarity=0.296 Sum_probs=28.7
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCC--CcEEEEEecCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGS--PWKVYGAARRP 48 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~--g~~V~~l~R~~ 48 (176)
..|+|.|| |.+|..++.+|. .. |++|+.+.|..
T Consensus 3 ~dVvIIGg-Gi~G~s~A~~La-----~~~~g~~V~llE~~~ 37 (393)
T PRK11728 3 YDFVIIGG-GIVGLSTAMQLQ-----ERYPGARIAVLEKES 37 (393)
T ss_pred ccEEEECC-cHHHHHHHHHHH-----HhCCCCeEEEEeCCC
Confidence 46899995 899999999999 56 99999999874
No 464
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=88.19 E-value=0.88 Score=36.40 Aligned_cols=36 Identities=33% Similarity=0.399 Sum_probs=31.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+.+++|+|++|-+|..+++.+. ..|.+|+++++++
T Consensus 142 ~~~~vlI~g~~~~~g~~~~~la~-----~~g~~v~~~~~~~ 177 (324)
T cd08244 142 PGDVVLVTAAAGGLGSLLVQLAK-----AAGATVVGAAGGP 177 (324)
T ss_pred CCCEEEEEcCCchHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 35689999999999999988888 6899999988764
No 465
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=88.03 E-value=0.92 Score=38.93 Aligned_cols=37 Identities=24% Similarity=0.267 Sum_probs=32.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
.+++++|+|. |.||+.+++.|. ..|.+|++.++++..
T Consensus 211 ~Gk~VlViG~-G~IG~~vA~~lr-----~~Ga~ViV~d~dp~r 247 (425)
T PRK05476 211 AGKVVVVAGY-GDVGKGCAQRLR-----GLGARVIVTEVDPIC 247 (425)
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-----hCCCEEEEEcCCchh
Confidence 5789999995 899999999999 789999999887644
No 466
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=88.01 E-value=0.32 Score=37.93 Aligned_cols=38 Identities=24% Similarity=0.246 Sum_probs=28.1
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecC
Q 030483 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARR 47 (176)
Q Consensus 4 ~~~~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~ 47 (176)
|+...+.+|+|.|+.| +|+++++.|. ..|. +++.++..
T Consensus 16 q~~L~~~~VlivG~Gg-lGs~va~~La-----~~Gvg~i~lvD~D 54 (228)
T cd00757 16 QEKLKNARVLVVGAGG-LGSPAAEYLA-----AAGVGKLGLVDDD 54 (228)
T ss_pred HHHHhCCcEEEECCCH-HHHHHHHHHH-----HcCCCEEEEEcCC
Confidence 3334567999999655 9999999999 6777 46666543
No 467
>PLN02712 arogenate dehydrogenase
Probab=88.01 E-value=0.9 Score=41.22 Aligned_cols=34 Identities=29% Similarity=0.282 Sum_probs=30.2
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
+++|.|.| .|.+|+.+++.|. ..|++|++++|+.
T Consensus 52 ~~kIgIIG-~G~mG~slA~~L~-----~~G~~V~~~dr~~ 85 (667)
T PLN02712 52 QLKIAIIG-FGNYGQFLAKTLI-----SQGHTVLAHSRSD 85 (667)
T ss_pred CCEEEEEc-cCHHHHHHHHHHH-----HCCCEEEEEeCCH
Confidence 46899999 7999999999999 6889999999863
No 468
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=88.01 E-value=0.74 Score=37.37 Aligned_cols=33 Identities=24% Similarity=0.207 Sum_probs=30.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEE
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGA 44 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l 44 (176)
..++++.|.|.||.+|.-++..|+ .+|+.|+..
T Consensus 156 l~Gk~v~vIG~S~ivG~Pla~lL~-----~~gatVtv~ 188 (284)
T PRK14179 156 LEGKHAVVIGRSNIVGKPMAQLLL-----DKNATVTLT 188 (284)
T ss_pred CCCCEEEEECCCCcCcHHHHHHHH-----HCCCEEEEE
Confidence 467999999999999999999999 689999887
No 469
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=87.95 E-value=0.87 Score=33.29 Aligned_cols=32 Identities=28% Similarity=0.252 Sum_probs=28.0
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
||.|.| +|--|.+++..|. .+|++|+.+.|++
T Consensus 1 KI~ViG-aG~~G~AlA~~la-----~~g~~V~l~~~~~ 32 (157)
T PF01210_consen 1 KIAVIG-AGNWGTALAALLA-----DNGHEVTLWGRDE 32 (157)
T ss_dssp EEEEES-SSHHHHHHHHHHH-----HCTEEEEEETSCH
T ss_pred CEEEEC-cCHHHHHHHHHHH-----HcCCEEEEEeccH
Confidence 578888 4778999999999 7999999999975
No 470
>PRK09126 hypothetical protein; Provisional
Probab=87.84 E-value=0.92 Score=37.73 Aligned_cols=37 Identities=38% Similarity=0.488 Sum_probs=31.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
||+..|+|.|| |-.|..++..|. ..|++|+.+.|.+.
T Consensus 1 ~~~~dviIvGg-G~aGl~~A~~L~-----~~G~~v~v~E~~~~ 37 (392)
T PRK09126 1 MMHSDIVVVGA-GPAGLSFARSLA-----GSGLKVTLIERQPL 37 (392)
T ss_pred CCcccEEEECc-CHHHHHHHHHHH-----hCCCcEEEEeCCCc
Confidence 45567999994 899999999999 68999999998764
No 471
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=87.80 E-value=0.73 Score=31.42 Aligned_cols=32 Identities=38% Similarity=0.462 Sum_probs=26.1
Q ss_pred EEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 12 vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
|+|.|. |-+|..+++.|. +.+++|+.+++++.
T Consensus 1 vvI~G~-g~~~~~i~~~L~-----~~~~~vvvid~d~~ 32 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLK-----EGGIDVVVIDRDPE 32 (116)
T ss_dssp EEEES--SHHHHHHHHHHH-----HTTSEEEEEESSHH
T ss_pred eEEEcC-CHHHHHHHHHHH-----hCCCEEEEEECCcH
Confidence 578886 579999999999 67779999998753
No 472
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=87.73 E-value=0.91 Score=32.51 Aligned_cols=31 Identities=35% Similarity=0.413 Sum_probs=27.1
Q ss_pred EEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 12 vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
|+|.|+ |-||..++.+|. ..|++|..++|+.
T Consensus 1 I~I~G~-GaiG~~~a~~L~-----~~g~~V~l~~r~~ 31 (151)
T PF02558_consen 1 ILIIGA-GAIGSLYAARLA-----QAGHDVTLVSRSP 31 (151)
T ss_dssp EEEEST-SHHHHHHHHHHH-----HTTCEEEEEESHH
T ss_pred CEEECc-CHHHHHHHHHHH-----HCCCceEEEEccc
Confidence 578885 559999999999 6999999999987
No 473
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=87.69 E-value=1 Score=39.52 Aligned_cols=34 Identities=21% Similarity=0.262 Sum_probs=30.4
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
++|.|.|+ |..|+.++..|+ ..|++|+..+|++.
T Consensus 8 ~~V~VIGa-G~MG~gIA~~la-----~aG~~V~l~D~~~e 41 (507)
T PRK08268 8 ATVAVIGA-GAMGAGIAQVAA-----QAGHTVLLYDARAG 41 (507)
T ss_pred CEEEEECC-CHHHHHHHHHHH-----hCCCeEEEEeCCHH
Confidence 67999986 999999999999 68999999998764
No 474
>PRK08773 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Validated
Probab=87.69 E-value=1.4 Score=36.85 Aligned_cols=36 Identities=31% Similarity=0.398 Sum_probs=30.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
+...|+|.| .|-.|..++-.|. ..|++|..+.|.+.
T Consensus 5 ~~~dV~IvG-aG~aGl~~A~~La-----~~G~~v~liE~~~~ 40 (392)
T PRK08773 5 SRRDAVIVG-GGVVGAACALALA-----DAGLSVALVEGREP 40 (392)
T ss_pred CCCCEEEEC-cCHHHHHHHHHHh-----cCCCEEEEEeCCCC
Confidence 345799988 5999999999998 79999999999764
No 475
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=87.66 E-value=0.96 Score=29.77 Aligned_cols=33 Identities=33% Similarity=0.285 Sum_probs=26.5
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCC---cEEEEE-ecCCC
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSP---WKVYGA-ARRPP 49 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g---~~V~~l-~R~~~ 49 (176)
||.|. |+|-+|.+|++.|+ ..| .+|+.. +|++.
T Consensus 1 kI~iI-G~G~mg~al~~~l~-----~~g~~~~~v~~~~~r~~~ 37 (96)
T PF03807_consen 1 KIGII-GAGNMGSALARGLL-----ASGIKPHEVIIVSSRSPE 37 (96)
T ss_dssp EEEEE-STSHHHHHHHHHHH-----HTTS-GGEEEEEEESSHH
T ss_pred CEEEE-CCCHHHHHHHHHHH-----HCCCCceeEEeeccCcHH
Confidence 46677 68999999999999 688 889855 77654
No 476
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=87.63 E-value=0.87 Score=36.81 Aligned_cols=35 Identities=34% Similarity=0.380 Sum_probs=30.1
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCC-CcEEEEEecCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGS-PWKVYGAARRP 48 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~-g~~V~~l~R~~ 48 (176)
+.++||+|++|.+|..+++.+. .. |.+|+++++++
T Consensus 149 g~~vlV~ga~g~vg~~~~~~ak-----~~~G~~vi~~~~~~ 184 (336)
T TIGR02817 149 KRALLIIGGAGGVGSILIQLAR-----QLTGLTVIATASRP 184 (336)
T ss_pred CCEEEEEcCCcHHHHHHHHHHH-----HhCCCEEEEEcCcH
Confidence 5699999999999999988777 55 89999988765
No 477
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=87.63 E-value=1.1 Score=35.29 Aligned_cols=36 Identities=22% Similarity=0.190 Sum_probs=31.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+.+++|.|++|.+|..+++.+. ..|.+|+.++++.
T Consensus 144 ~~~~vlv~g~~g~~g~~~~~~a~-----~~g~~v~~~~~~~ 179 (309)
T cd05289 144 AGQTVLIHGAAGGVGSFAVQLAK-----ARGARVIATASAA 179 (309)
T ss_pred CCCEEEEecCCchHHHHHHHHHH-----HcCCEEEEEecch
Confidence 45789999999999999999888 6899998887654
No 478
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]
Probab=87.60 E-value=1.4 Score=35.30 Aligned_cols=37 Identities=16% Similarity=0.197 Sum_probs=29.5
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEE-EEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVY-GAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~-~l~R~~~ 49 (176)
.++|.|.|++|-.|+.|++.+.+ ..+.++. +++|.+.
T Consensus 2 ~iki~V~Ga~GRMG~~ii~~v~~----~~~~~L~aa~~~~~~ 39 (266)
T COG0289 2 MIKVAVAGASGRMGRTLIRAVLE----APDLELVAAFDRPGS 39 (266)
T ss_pred CceEEEEcCCChHHHHHHHHHhc----CCCceEEEEEecCCc
Confidence 46899999999999999999995 5667744 4667654
No 479
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=87.58 E-value=1 Score=36.77 Aligned_cols=68 Identities=16% Similarity=0.136 Sum_probs=47.0
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCC--cEEEEEecCCCCCC------C------C--------------CCcc---
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPGW------F------P--------------TALV--- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~~~------~------~--------------~~~v--- 58 (176)
|+|.|.|+ |.+|..++..|+ ..| .+|..++++..... . . .+.+
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~-----~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~d~~~l~~aDiViit 74 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALL-----LRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAGDYADCKGADVVVIT 74 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHH-----HcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeCCHHHhCCCCEEEEc
Confidence 37999997 999999999999 577 57999998753210 0 0 0011
Q ss_pred -------cCcHHHHHHHHHHHHHHHHHHHHhc
Q 030483 59 -------QESEEVNIFKNSTMLKNVLSVLVSS 83 (176)
Q Consensus 59 -------~~~~~~~~~~N~~~t~~ll~a~~~~ 83 (176)
..+....+..|+...+.+++.+.+.
T Consensus 75 a~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~ 106 (308)
T cd05292 75 AGANQKPGETRLDLLKRNVAIFKEIIPQILKY 106 (308)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1234456778888888888888776
No 480
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=87.58 E-value=1 Score=35.83 Aligned_cols=36 Identities=31% Similarity=0.323 Sum_probs=31.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+.++||.|++|-+|..+++.+. ..|.+|+++++++
T Consensus 142 ~g~~vlV~ga~g~~g~~~~~~a~-----~~g~~v~~~~~~~ 177 (320)
T cd08243 142 PGDTLLIRGGTSSVGLAALKLAK-----ALGATVTATTRSP 177 (320)
T ss_pred CCCEEEEEcCCChHHHHHHHHHH-----HcCCEEEEEeCCH
Confidence 35789999999999999999888 6899999888764
No 481
>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed
Probab=87.57 E-value=1.1 Score=37.40 Aligned_cols=34 Identities=32% Similarity=0.216 Sum_probs=29.9
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
++|+|.|+ |.+|+-++.++. +.|++|++++..+.
T Consensus 3 ~~igilG~-Gql~~ml~~aa~-----~lG~~v~~~d~~~~ 36 (372)
T PRK06019 3 KTIGIIGG-GQLGRMLALAAA-----PLGYKVIVLDPDPD 36 (372)
T ss_pred CEEEEECC-CHHHHHHHHHHH-----HcCCEEEEEeCCCC
Confidence 58999997 799999999999 69999999987643
No 482
>PRK05335 tRNA (uracil-5-)-methyltransferase Gid; Reviewed
Probab=87.45 E-value=1 Score=38.68 Aligned_cols=35 Identities=26% Similarity=0.198 Sum_probs=29.7
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
++.|+|.| .|.+|..++-+|. ..|++|..+.+++.
T Consensus 2 ~~dVvVIG-GGlAGleAAlaLA-----r~Gl~V~LiE~rp~ 36 (436)
T PRK05335 2 MKPVNVIG-AGLAGSEAAWQLA-----KRGVPVELYEMRPV 36 (436)
T ss_pred CCcEEEEC-CCHHHHHHHHHHH-----hCCCcEEEEEccCc
Confidence 35788988 5899999999999 69999999986543
No 483
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=87.44 E-value=0.67 Score=37.29 Aligned_cols=33 Identities=21% Similarity=0.285 Sum_probs=28.4
Q ss_pred eEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 11 ~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
+|.|.| .|.+|+.+++.|+ ..|++|++++|++.
T Consensus 1 ~IgvIG-~G~mG~~iA~~l~-----~~G~~V~~~dr~~~ 33 (291)
T TIGR01505 1 KVGFIG-LGIMGSPMSINLA-----KAGYQLHVTTIGPE 33 (291)
T ss_pred CEEEEE-ecHHHHHHHHHHH-----HCCCeEEEEcCCHH
Confidence 366776 7999999999999 68999999998753
No 484
>TIGR00243 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase. 1-deoxy-D-xylulose 5-phosphate is converted to 2-C-methyl-D-erythritol 4-phosphate in the presence of NADPH. It is involved in the synthesis of isopentenyl diphosphate (IPP), a basic building block in isoprenoid, thiamin, and pyridoxal biosynthesis.
Probab=87.43 E-value=1 Score=38.10 Aligned_cols=34 Identities=21% Similarity=0.338 Sum_probs=27.6
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEec
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAAR 46 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R 46 (176)
|++.|.|+||-||...++-+.+ +.+.++|.+++=
T Consensus 2 k~i~IlGsTGSIG~qtL~Vi~~---~~~~f~v~~Laa 35 (389)
T TIGR00243 2 KQIVILGSTGSIGKSTLDVVRH---NPDHFQVVALSA 35 (389)
T ss_pred ceEEEEecChHHHHHHHHHHHh---CccccEEEEEEc
Confidence 6899999999999998887653 136699999863
No 485
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=87.19 E-value=1.1 Score=36.54 Aligned_cols=37 Identities=24% Similarity=0.169 Sum_probs=29.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
..++|+|.|+ |-+|..+++.|.. ..+.+|+.++|++.
T Consensus 177 ~~~~V~ViGa-G~iG~~~a~~L~~----~g~~~V~v~~r~~~ 213 (311)
T cd05213 177 KGKKVLVIGA-GEMGELAAKHLAA----KGVAEITIANRTYE 213 (311)
T ss_pred cCCEEEEECc-HHHHHHHHHHHHH----cCCCEEEEEeCCHH
Confidence 4678999986 9999999999983 24467888888754
No 486
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=87.16 E-value=0.98 Score=36.18 Aligned_cols=36 Identities=19% Similarity=0.146 Sum_probs=31.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+.++||.|++|-+|..+++.+. ..|.+|+.++++.
T Consensus 139 ~g~~vlI~g~~g~ig~~~~~~a~-----~~G~~v~~~~~~~ 174 (324)
T cd08292 139 PGQWLIQNAAGGAVGKLVAMLAA-----ARGINVINLVRRD 174 (324)
T ss_pred CCCEEEEcccccHHHHHHHHHHH-----HCCCeEEEEecCH
Confidence 45789999999999999999888 7899998887754
No 487
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=87.11 E-value=1.7 Score=35.61 Aligned_cols=36 Identities=19% Similarity=0.244 Sum_probs=31.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.++++.|.| .|-||+.+++.|. .-|++|++++|...
T Consensus 135 ~g~tvgIvG-~G~IG~~vA~~l~-----afG~~V~~~~~~~~ 170 (312)
T PRK15469 135 EDFTIGILG-AGVLGSKVAQSLQ-----TWGFPLRCWSRSRK 170 (312)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHH-----HCCCEEEEEeCCCC
Confidence 568899988 7999999999999 79999999998654
No 488
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=87.02 E-value=0.71 Score=35.72 Aligned_cols=30 Identities=23% Similarity=0.155 Sum_probs=26.2
Q ss_pred cCC--hHHHHHHHHHhhCCCCCCCCcEEEEEecCCCC
Q 030483 16 GVT--GISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (176)
Q Consensus 16 Gat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 50 (176)
|++ +-||++++++|+ +.|++|+..+|+...
T Consensus 1 g~~~s~GiG~aia~~l~-----~~Ga~V~~~~~~~~~ 32 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALA-----EEGANVILTDRNEEK 32 (241)
T ss_dssp STSSTSHHHHHHHHHHH-----HTTEEEEEEESSHHH
T ss_pred CCCCCCChHHHHHHHHH-----HCCCEEEEEeCChHH
Confidence 566 889999999999 799999999998653
No 489
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=86.99 E-value=0.98 Score=32.00 Aligned_cols=35 Identities=29% Similarity=0.263 Sum_probs=26.8
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCc-EEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~ 49 (176)
+++|+|.|+.| +|+.+++.|. ..|. +++.++...-
T Consensus 2 ~~~v~iiG~G~-vGs~va~~L~-----~~Gv~~i~lvD~d~v 37 (135)
T PF00899_consen 2 NKRVLIIGAGG-VGSEVAKNLA-----RSGVGKITLVDDDIV 37 (135)
T ss_dssp T-EEEEESTSH-HHHHHHHHHH-----HHTTSEEEEEESSBB
T ss_pred CCEEEEECcCH-HHHHHHHHHH-----HhCCCceeecCCcce
Confidence 46899999655 9999999999 5787 5777776543
No 490
>PRK06545 prephenate dehydrogenase; Validated
Probab=86.94 E-value=0.95 Score=37.77 Aligned_cols=34 Identities=35% Similarity=0.446 Sum_probs=28.5
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
++|.|.| .|.+|..++..|. ..|++|..+++++.
T Consensus 1 ~~I~iIG-~GliG~siA~~L~-----~~G~~v~i~~~~~~ 34 (359)
T PRK06545 1 RTVLIVG-LGLIGGSLALAIK-----AAGPDVFIIGYDPS 34 (359)
T ss_pred CeEEEEE-eCHHHHHHHHHHH-----hcCCCeEEEEeCCC
Confidence 3678886 7999999999999 68999888887654
No 491
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=86.94 E-value=1.2 Score=36.10 Aligned_cols=36 Identities=22% Similarity=0.219 Sum_probs=30.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+.++||.|++|-+|..+++.+. ..|++|++++++.
T Consensus 177 ~g~~vlI~g~~g~ig~~~~~~a~-----~~g~~vi~~~~~~ 212 (350)
T cd08274 177 AGETVLVTGASGGVGSALVQLAK-----RRGAIVIAVAGAA 212 (350)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHH-----hcCCEEEEEeCch
Confidence 35799999999999999988888 6899998887653
No 492
>PRK06436 glycerate dehydrogenase; Provisional
Probab=86.84 E-value=1.3 Score=36.17 Aligned_cols=36 Identities=22% Similarity=0.138 Sum_probs=31.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.++++.|.| .|-||+.+++.|. .-|.+|++++|+..
T Consensus 121 ~gktvgIiG-~G~IG~~vA~~l~-----afG~~V~~~~r~~~ 156 (303)
T PRK06436 121 YNKSLGILG-YGGIGRRVALLAK-----AFGMNIYAYTRSYV 156 (303)
T ss_pred CCCEEEEEC-cCHHHHHHHHHHH-----HCCCEEEEECCCCc
Confidence 578999998 6999999999887 68999999998643
No 493
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=86.80 E-value=1.1 Score=35.43 Aligned_cols=36 Identities=28% Similarity=0.383 Sum_probs=31.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
.+.+++|+|++|-+|..+++.+. ..|++|+.++++.
T Consensus 139 ~~~~vli~g~~~~~g~~~~~~a~-----~~g~~v~~~~~~~ 174 (323)
T cd08241 139 PGETVLVLGAAGGVGLAAVQLAK-----ALGARVIAAASSE 174 (323)
T ss_pred CCCEEEEEcCCchHHHHHHHHHH-----HhCCEEEEEeCCH
Confidence 35789999999999999999888 7899999888764
No 494
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=86.76 E-value=1.3 Score=37.57 Aligned_cols=33 Identities=18% Similarity=0.321 Sum_probs=27.9
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEe
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAA 45 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~ 45 (176)
|+|.|.|+||-||..-++.+.+ ..+.++|.+++
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~---~p~~f~VvaLa 34 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRR---NPDRFRVVALS 34 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHh---CccccEEEEEE
Confidence 6899999999999999988863 14578999987
No 495
>KOG1496 consensus Malate dehydrogenase [Energy production and conversion]
Probab=86.74 E-value=0.58 Score=37.24 Aligned_cols=21 Identities=29% Similarity=0.411 Sum_probs=19.6
Q ss_pred CeEEEEcCChHHHHHHHHHhh
Q 030483 10 SVALIIGVTGISGLSLAEALK 30 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~ 30 (176)
-+||||||+|.||.+|+-.+.
T Consensus 5 irVlVtGAAGqI~ysll~~ia 25 (332)
T KOG1496|consen 5 IRVLVTGAAGQIGYSLLPMIA 25 (332)
T ss_pred eEEEeecccchhhHHHHHHHc
Confidence 389999999999999999987
No 496
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=86.71 E-value=1.4 Score=36.69 Aligned_cols=37 Identities=16% Similarity=0.069 Sum_probs=27.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCC
Q 030483 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (176)
Q Consensus 7 ~~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 48 (176)
..++.|||.||+|-+|+++++-+. ..+..++..+++.
T Consensus 156 ~~g~~vLv~ggsggVG~~aiQlAk-----~~~~~~v~t~~s~ 192 (347)
T KOG1198|consen 156 SKGKSVLVLGGSGGVGTAAIQLAK-----HAGAIKVVTACSK 192 (347)
T ss_pred CCCCeEEEEeCCcHHHHHHHHHHH-----hcCCcEEEEEccc
Confidence 356799999999999999999998 5774444444443
No 497
>PRK08163 salicylate hydroxylase; Provisional
Probab=86.71 E-value=1.2 Score=37.04 Aligned_cols=35 Identities=34% Similarity=0.356 Sum_probs=30.5
Q ss_pred CCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 9 ~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.++|+|.| .|-.|..++..|. ..|++|+.+.|++.
T Consensus 4 ~~~V~IvG-aGiaGl~~A~~L~-----~~g~~v~v~Er~~~ 38 (396)
T PRK08163 4 VTPVLIVG-GGIGGLAAALALA-----RQGIKVKLLEQAAE 38 (396)
T ss_pred CCeEEEEC-CcHHHHHHHHHHH-----hCCCcEEEEeeCcc
Confidence 46899999 5899999999998 69999999998764
No 498
>KOG4288 consensus Predicted oxidoreductase [General function prediction only]
Probab=86.69 E-value=0.36 Score=38.16 Aligned_cols=121 Identities=14% Similarity=0.088 Sum_probs=81.0
Q ss_pred CeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCCCC----CCC-CCc-----c---------------------
Q 030483 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----WFP-TAL-----V--------------------- 58 (176)
Q Consensus 10 ~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~~~-~~~-----v--------------------- 58 (176)
.+.++.|++||.|+++|+... ..+++|-.+.|+..+. |.. +.+ +
T Consensus 53 e~tlvlggnpfsgs~vlk~A~-----~vv~svgilsen~~k~~l~sw~~~vswh~gnsfssn~~k~~l~g~t~v~e~~gg 127 (283)
T KOG4288|consen 53 EWTLVLGGNPFSGSEVLKNAT-----NVVHSVGILSENENKQTLSSWPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGG 127 (283)
T ss_pred HHHhhhcCCCcchHHHHHHHH-----hhceeeeEeecccCcchhhCCCcccchhhccccccCcchhhhcCCcccHHHhcC
Confidence 468899999999999999999 7999999999984331 221 110 0
Q ss_pred cCcHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEEeccceeecccccCCCccCCCCCCCccccCCCCCCCCCcchHH-
Q 030483 59 QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYE- 137 (176)
Q Consensus 59 ~~~~~~~~~~N~~~t~~ll~a~~~~~~~~~~v~~vv~~Ss~~~yg~~~~d~~~~g~~~~~~~p~~E~~~~~~~~~~y~~- 137 (176)
..+...+.++|-+...+.++++.+. ++++|+|+|. ..||- .|+ . +.-|+.
T Consensus 128 fgn~~~m~~ing~ani~a~kaa~~~-----gv~~fvyISa-~d~~~---------------~~~---i-----~rGY~~g 178 (283)
T KOG4288|consen 128 FGNIILMDRINGTANINAVKAAAKA-----GVPRFVYISA-HDFGL---------------PPL---I-----PRGYIEG 178 (283)
T ss_pred ccchHHHHHhccHhhHHHHHHHHHc-----CCceEEEEEh-hhcCC---------------CCc---c-----chhhhcc
Confidence 2334455678888877888888887 7899999974 22221 111 1 122332
Q ss_pred ---HHHHHHhhCCCceEEEeccCceEeCCCC
Q 030483 138 ---LEDVSASYSPAITYSVHRSSVIIGASPR 165 (176)
Q Consensus 138 ---~e~~~~~~~~g~~~~ivRp~~v~G~~~~ 165 (176)
.|..+. ...+++-+|+||+.+||-+.-
T Consensus 179 KR~AE~Ell-~~~~~rgiilRPGFiyg~R~v 208 (283)
T KOG4288|consen 179 KREAEAELL-KKFRFRGIILRPGFIYGTRNV 208 (283)
T ss_pred chHHHHHHH-HhcCCCceeeccceeeccccc
Confidence 232222 345688899999999999763
No 499
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=86.69 E-value=1.2 Score=35.67 Aligned_cols=37 Identities=19% Similarity=0.162 Sum_probs=31.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHhhCCCCCCCCcEEEEEecCCC
Q 030483 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (176)
Q Consensus 8 ~~~~vLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 49 (176)
.+.++||.|++|.+|..+++.+. ..|.+|+.++++..
T Consensus 138 ~~~~vlI~g~~~~vg~~~~~~a~-----~~g~~v~~~~~~~~ 174 (323)
T cd05282 138 PGDWVIQNAANSAVGRMLIQLAK-----LLGFKTINVVRRDE 174 (323)
T ss_pred CCCEEEEcccccHHHHHHHHHHH-----HCCCeEEEEecChH
Confidence 35689999999999999999888 78999988887653
No 500
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=86.64 E-value=1.2 Score=38.80 Aligned_cols=35 Identities=20% Similarity=0.149 Sum_probs=31.4
Q ss_pred CCCCCeEEEEcC----------------ChHHHHHHHHHhhCCCCCCCCcEEEEEe
Q 030483 6 QNPKSVALIIGV----------------TGISGLSLAEALKNPTTPGSPWKVYGAA 45 (176)
Q Consensus 6 ~~~~~~vLVtGa----------------tGfiG~~l~~~L~~~~~~~~g~~V~~l~ 45 (176)
+..+++||||+| ||-.|.+|++++. ..|++|+.++
T Consensus 253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~-----~~GA~VtlI~ 303 (475)
T PRK13982 253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAA-----AAGAEVTLIS 303 (475)
T ss_pred ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHH-----HCCCcEEEEe
Confidence 357889999987 8999999999999 7999999886
Done!