Query 030486
Match_columns 176
No_of_seqs 160 out of 1395
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 23:33:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030486.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030486hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3op1_A Macrolide-efflux protei 99.9 3E-28 1E-32 200.1 6.2 138 21-173 20-181 (308)
2 3do8_A Phosphopantetheine aden 99.9 1E-27 3.4E-32 178.4 5.8 140 23-168 2-142 (148)
3 2x0k_A Riboflavin biosynthesis 99.9 2.6E-26 8.9E-31 191.2 7.9 142 21-173 15-178 (338)
4 1mrz_A Riboflavin kinase/FMN a 99.9 1.1E-25 3.9E-30 184.0 5.9 137 23-174 1-152 (293)
5 3glv_A Lipopolysaccharide core 99.9 2.5E-26 8.6E-31 169.8 0.4 138 21-170 2-139 (143)
6 1o6b_A Phosphopantetheine aden 99.8 3.9E-21 1.3E-25 145.1 10.2 136 21-170 2-140 (169)
7 1qjc_A Phosphopantetheine aden 99.8 4.1E-21 1.4E-25 143.1 9.5 134 22-170 2-139 (158)
8 2b7l_A Glycerol-3-phosphate cy 99.8 1.1E-21 3.7E-26 142.6 4.7 128 22-172 2-132 (132)
9 2qtr_A Nicotinate (nicotinamid 99.8 2.2E-20 7.6E-25 143.0 7.8 142 21-171 2-168 (189)
10 1coz_A Protein (glycerol-3-pho 99.8 1.3E-20 4.5E-25 136.2 4.7 124 22-168 2-128 (129)
11 3k9w_A Phosphopantetheine aden 99.8 1.3E-19 4.5E-24 139.3 10.6 136 20-170 21-160 (187)
12 1kam_A Deamido-NAD(+), nicotin 99.8 1.6E-19 5.4E-24 139.2 8.4 142 19-170 5-172 (194)
13 1od6_A PPAT, phosphopantethein 99.8 4.4E-19 1.5E-23 132.4 10.5 135 24-170 3-140 (160)
14 4f3r_A Phosphopantetheine aden 99.7 1.6E-18 5.4E-23 130.5 7.0 135 20-170 4-142 (162)
15 3f3m_A Phosphopantetheine aden 99.7 5.1E-18 1.7E-22 128.4 8.9 135 21-170 3-141 (168)
16 1ej2_A Nicotinamide mononucleo 99.7 1.3E-17 4.4E-22 127.3 10.8 131 22-170 4-143 (181)
17 3nv7_A Phosphopantetheine aden 99.7 1E-18 3.5E-23 130.9 3.9 134 21-169 2-139 (157)
18 3h05_A Uncharacterized protein 99.7 6.1E-18 2.1E-22 129.0 7.5 137 21-170 2-150 (177)
19 2h29_A Probable nicotinate-nuc 99.7 4.1E-18 1.4E-22 130.7 5.9 139 21-170 2-167 (189)
20 3nbk_A Phosphopantetheine aden 99.7 3.7E-17 1.3E-21 124.4 9.7 134 20-169 20-157 (177)
21 1k4m_A NAMN adenylyltransferas 99.7 3.3E-17 1.1E-21 128.0 9.2 93 23-121 4-110 (213)
22 3nd5_A Phosphopantetheine aden 99.7 2E-17 7E-22 125.4 7.7 137 20-170 1-141 (171)
23 3hl4_A Choline-phosphate cytid 99.7 1.1E-17 3.9E-22 131.9 5.8 133 20-172 75-215 (236)
24 2qjo_A Bifunctional NMN adenyl 99.7 7.4E-17 2.5E-21 133.0 8.3 135 20-172 6-154 (341)
25 3elb_A Ethanolamine-phosphate 99.7 5.5E-17 1.9E-21 134.9 7.4 130 20-168 6-140 (341)
26 1yum_A 'probable nicotinate-nu 99.7 1.3E-16 4.4E-21 127.2 8.9 70 21-95 23-93 (242)
27 1vlh_A Phosphopantetheine aden 99.7 2.7E-16 9.1E-21 119.4 8.3 135 21-170 12-150 (173)
28 1f9a_A Hypothetical protein MJ 99.6 3E-15 1E-19 112.8 12.2 62 23-89 2-64 (168)
29 2ejc_A Pantoate--beta-alanine 99.6 4.2E-16 1.4E-20 126.2 4.7 138 22-163 22-190 (280)
30 1nup_A FKSG76; NAD biosynthesi 99.6 3.8E-15 1.3E-19 119.3 9.6 77 21-99 6-85 (252)
31 1kqn_A Nmnat, nicotinamide mon 99.6 2.7E-15 9.3E-20 121.8 7.0 66 21-89 8-78 (279)
32 1lw7_A Transcriptional regulat 99.5 7.2E-14 2.5E-18 116.7 8.9 66 22-89 3-73 (365)
33 2qjt_B Nicotinamide-nucleotide 99.5 8.4E-14 2.9E-18 115.3 8.8 65 20-88 6-70 (352)
34 3elb_A Ethanolamine-phosphate 99.4 1.3E-13 4.5E-18 114.6 6.8 133 21-170 198-338 (341)
35 1v8f_A Pantoate-beta-alanine l 99.4 9.7E-14 3.3E-18 112.0 3.6 127 22-163 20-186 (276)
36 3gmi_A UPF0348 protein MJ0951; 99.4 5.8E-13 2E-17 111.2 8.4 88 21-119 52-151 (357)
37 3ag6_A Pantothenate synthetase 99.3 9.5E-13 3.2E-17 106.5 4.3 132 24-163 28-191 (283)
38 1jhd_A Sulfate adenylyltransfe 99.1 1.1E-09 3.8E-14 92.6 13.2 94 22-121 193-298 (396)
39 3cov_A Pantothenate synthetase 99.1 2.3E-11 7.7E-16 99.2 2.5 128 22-163 33-202 (301)
40 1v47_A ATP sulfurylase; produc 99.0 2.6E-09 8.8E-14 89.0 12.4 140 22-170 156-330 (349)
41 1r6x_A ATP:sulfate adenylyltra 97.9 0.00011 3.9E-09 61.9 11.1 93 22-121 188-291 (395)
42 3uk2_A Pantothenate synthetase 97.6 6.9E-05 2.4E-09 60.4 5.8 62 22-84 22-85 (283)
43 1g8f_A Sulfate adenylyltransfe 97.5 0.00075 2.6E-08 58.7 10.9 93 22-121 189-292 (511)
44 3inn_A Pantothenate synthetase 97.4 0.00017 5.7E-09 58.8 5.2 55 26-84 50-106 (314)
45 2gks_A Bifunctional SAT/APS ki 97.2 0.0018 6.2E-08 56.7 10.3 94 22-121 164-268 (546)
46 1m8p_A Sulfate adenylyltransfe 97.0 0.0038 1.3E-07 55.0 9.6 92 22-120 191-293 (573)
47 1x6v_B Bifunctional 3'-phospho 96.5 0.037 1.3E-06 49.3 12.3 95 22-121 413-524 (630)
48 3cr8_A Sulfate adenylyltranfer 96.3 0.02 6.8E-07 50.2 9.7 93 22-121 164-267 (552)
49 3q12_A Pantoate--beta-alanine 95.4 0.021 7.3E-07 45.9 5.4 58 23-84 27-88 (287)
50 3mxt_A Pantothenate synthetase 87.6 1.5 5E-05 35.2 6.6 54 26-84 32-87 (285)
51 3n8h_A Pantothenate synthetase 87.2 0.5 1.7E-05 37.5 3.6 62 22-84 24-87 (264)
52 2f6r_A COA synthase, bifunctio 53.9 1.9 6.6E-05 33.8 -0.9 42 126-167 13-58 (281)
53 2l8k_A NSP7, non-structural pr 38.7 16 0.00055 25.2 2.0 29 3-34 65-94 (123)
54 1yi8_B Tryptophanyl-tRNA synth 24.5 96 0.0033 25.1 4.7 26 33-58 35-62 (351)
55 2f9f_A First mannosyl transfer 23.7 1.2E+02 0.0041 20.9 4.7 26 21-47 23-48 (177)
56 2zp1_A Tyrosyl-tRNA synthetase 22.9 1.1E+02 0.0038 24.3 4.7 26 33-58 41-68 (314)
57 2cya_A Tyrosyl-tRNA synthetase 22.8 80 0.0027 25.7 3.9 33 25-58 38-75 (364)
No 1
>3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae}
Probab=99.94 E-value=3e-28 Score=200.08 Aligned_cols=138 Identities=22% Similarity=0.232 Sum_probs=105.7
Q ss_pred CCeEEEeCcCCcCCHHHHHHHHHHHHHhcCC--eEEEEccCCC----CCC--cCcCCCCCCHHHHHHHHHHH--------
Q 030486 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDR--IVVGVCDGPM----LTN--KQFAELIQPVDERMRNVEAY-------- 84 (176)
Q Consensus 21 ~~~vv~~G~FDgvH~GH~~ll~~a~~~~~~~--~~v~vt~~~~----~~~--k~~~~~l~~~~eR~~~l~~~-------- 84 (176)
.++++++|+|||+|+|||+||++|++.|++. .++++||++. +.+ .+.+.+|+|.++|.++++++
T Consensus 20 ~~~vvtiG~FDGvH~GHq~li~~a~~~a~~~~~~~vV~TFdphP~~v~~~~~~~~~~~Lt~~~eK~~ll~~lGVD~v~~~ 99 (308)
T 3op1_A 20 SDSVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNESPKIALEPYHPDLFLHILNPAERERKLKREGVEELYLL 99 (308)
T ss_dssp SCEEEEESCCSSCCHHHHHHHHHHHHHSSTTCCCEEEEEESSCTHHHHSCCCGGGGCBSSCHHHHHHHHHHHTCCEEEEE
T ss_pred CCeEEEEecCCcccHHHHHHHHHHHHHHHhcCCceEEEEecCCHHHHhCccccCCcccCCCHHHHHHHHHHcCCCEEEEe
Confidence 4689999999999999999999999998754 4678899862 222 12346799999999999987
Q ss_pred -----HHhcCCCceEEEeeccCCCCCccccCCccEEEEcCCcccChhhhhh---hHHhCCCCceeEEEEeeeecCCCCCe
Q 030486 85 -----IKSIKPELVVQTEPITDPYGPSIVDENLEAIVVSKETLPGGLSVNK---KRADRGLSQLKIEVVDLVSEGSSGDK 156 (176)
Q Consensus 85 -----~~~~~~~~~v~~~~l~~~~~~~~~~~~~~~ivvG~d~~fG~~~~~~---~~~~~~~~~l~v~~v~~~~~~~~~~~ 156 (176)
++.++|++|++.+ + ..++++.+|||+||+||. +.++ ++..+. . ++.+++.+. .++.+
T Consensus 100 ~F~~~~a~ls~e~Fv~~l-l--------~~l~~~~ivvG~DfrFG~-r~G~~~~L~~~~~--~-~V~~v~~~~--~~~~~ 164 (308)
T 3op1_A 100 DFSSQFASLTAQEFFATY-I--------KAMNAKIIVAGFDYTFGS-DKKTAEDLKNYFD--G-EVIIVPPVE--DEKGK 164 (308)
T ss_dssp CCCHHHHTCCHHHHHHHH-H--------HHHTEEEEEEETTCCBTT-TTBCSTTHHHHCS--S-EEEEECCCB--CSSCB
T ss_pred cCCHHHHcCCHHHHHHHH-H--------HHcCCCEEEECcCCCCCC-cCCCHHHHHHhCC--C-CEEEeCCEe--cCCce
Confidence 4567777777521 1 145899999999999996 4422 333332 2 677788766 36889
Q ss_pred eehHHHHHHHHhhcccc
Q 030486 157 LSSSTLRKLEAEKAKNE 173 (176)
Q Consensus 157 ISST~IR~~i~~g~~~~ 173 (176)
||||+||++|.+|++.+
T Consensus 165 ISST~IR~~L~~G~v~~ 181 (308)
T 3op1_A 165 ISSTRIRQAILDGNVKE 181 (308)
T ss_dssp CCHHHHHHHHHHTCHHH
T ss_pred EeHHHHHHHHHcCCHHH
Confidence 99999999999999865
No 2
>3do8_A Phosphopantetheine adenylyltransferase; protein with unknown function, structural genomics, MCSG, PSI-2, protein structure initiative; 1.60A {Archaeoglobus fulgidus}
Probab=99.94 E-value=1e-27 Score=178.41 Aligned_cols=140 Identities=32% Similarity=0.551 Sum_probs=114.0
Q ss_pred eEEEeCcCCcCCHHHHHHHHHHHHHhcCCeEEEEccCCCCCCcCcCCCCCCHHHHHHHHHHHH-HhcCCCceEEEeeccC
Q 030486 23 AVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYI-KSIKPELVVQTEPITD 101 (176)
Q Consensus 23 ~vv~~G~FDgvH~GH~~ll~~a~~~~~~~~~v~vt~~~~~~~k~~~~~l~~~~eR~~~l~~~~-~~~~~~~~v~~~~l~~ 101 (176)
.++++|+|||+|.||+.++++|.+.+.+.++++++.++... |+ ..++.+.++|++|++.++ +.+.+. +.+..+.|
T Consensus 2 ~~i~gGtFDPiH~GHl~l~~~a~~~~~d~viv~v~~~~~~~-k~-~~~~~~~~~R~~ml~~a~~~~~~~~--~~i~~i~D 77 (148)
T 3do8_A 2 KVALGGTFEPLHEGHKKLIDVAIKLGGRDITIGVTSDRMAR-AR-IRSVLPFAIRAENVKRYVMRKYGFE--PEIVKITN 77 (148)
T ss_dssp CEEEEECCSSCCHHHHHHHHHHHHHHTTCEEEEEECHHHHH-HH-SCCCSCHHHHHHHHHHHHHHHHSSC--CEEEEECS
T ss_pred EEEEEeeCCCCCHHHHHHHHHHHHhCCCEEEEEECCCcccc-cc-CCCCCCHHHHHHHHHHHHhcccCCc--EEEEeecC
Confidence 58999999999999999999999986467888898876442 22 356789999999999999 887654 34457889
Q ss_pred CCCCccccCCccEEEEcCCcccChhhhhhhHHhCCCCceeEEEEeeeecCCCCCeeehHHHHHHHHh
Q 030486 102 PYGPSIVDENLEAIVVSKETLPGGLSVNKKRADRGLSQLKIEVVDLVSEGSSGDKLSSSTLRKLEAE 168 (176)
Q Consensus 102 ~~~~~~~~~~~~~ivvG~d~~fG~~~~~~~~~~~~~~~l~v~~v~~~~~~~~~~~ISST~IR~~i~~ 168 (176)
.++|+. ..++++|||++|+..|...+++++++.|++++++.+++.+.. .++.+||||+||+++.+
T Consensus 78 ~~g~~~-~~~~d~ivvs~Et~~~~~~l~~~~~~~G~~~l~V~~v~~~~~-~~~~~iSST~IR~~~id 142 (148)
T 3do8_A 78 PYGKTL-DVDFEYLVVSPETYEMALKINQKREELGKRKITIVKVDWMMA-EDGKPISSTRIKRGEID 142 (148)
T ss_dssp TTTTTT-TSCCSEEEECTTTHHHHHHHHHHHHHHTCCCCEEEEEECCC--------CCCCCCCSCCC
T ss_pred CCCCCC-CCCCCEEEEChhhcccHHHHHHHHHHcCCCeeEEEEeccEEc-CCCCEEEHHHHHHHHHh
Confidence 999997 478999999999999999999999999999999999998752 26889999999998865
No 3
>2x0k_A Riboflavin biosynthesis protein RIBF; riboflavin kinase, nucleotide-binding, transferase, ATP-BIND multifunctional enzyme; 1.95A {Corynebacterium ammoniagenes}
Probab=99.93 E-value=2.6e-26 Score=191.19 Aligned_cols=142 Identities=24% Similarity=0.313 Sum_probs=104.5
Q ss_pred CCeEEEeCcCCcCCHHHHHHHHHHHHHhcCC--eEEEEccCC----CCCCcCcCCCCCCHHHHHHHHHHHH---------
Q 030486 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDR--IVVGVCDGP----MLTNKQFAELIQPVDERMRNVEAYI--------- 85 (176)
Q Consensus 21 ~~~vv~~G~FDgvH~GH~~ll~~a~~~~~~~--~~v~vt~~~----~~~~k~~~~~l~~~~eR~~~l~~~~--------- 85 (176)
.++++++|+|||+|+|||+||++|++.|++. .++++||++ ++...+.+..|+|.++|.++++++-
T Consensus 15 ~~~vvtiG~FDGvH~GHq~Li~~a~~~a~~~~~~~vvvtFdphP~~v~~~~~~~~~L~~~~eR~~ll~~~gVD~v~v~~F 94 (338)
T 2x0k_A 15 DNSAVTIGVFDGVHRGHQKLINATVEKAREVGAKAIMVTFDPHPVSVFLPRRAPLGITTLAERFALAESFGIDGVLVIDF 94 (338)
T ss_dssp CCEEEEESCCTTCCHHHHHHHHHHHHHHHHHTCEEEEEEESSCHHHHHSTTCSCCBSSCHHHHHHHHHHTTCSEEEEECT
T ss_pred CCeEEEEEeCCcccHHHHHHHHHHHHHHHHcCCcEEEEEecCCHHHHcCCccCCCCCCCHHHHHHHHHhcCCCEEEEccc
Confidence 3589999999999999999999999998642 467889986 2322222456899999999998851
Q ss_pred ----HhcCCCceEEEeeccCCCCCccccCCccEEEEcCCcccChhhh---hhhHHhCCCCceeEEEEeeeecCCCCCeee
Q 030486 86 ----KSIKPELVVQTEPITDPYGPSIVDENLEAIVVSKETLPGGLSV---NKKRADRGLSQLKIEVVDLVSEGSSGDKLS 158 (176)
Q Consensus 86 ----~~~~~~~~v~~~~l~~~~~~~~~~~~~~~ivvG~d~~fG~~~~---~~~~~~~~~~~l~v~~v~~~~~~~~~~~IS 158 (176)
+.++|+.|++.+ | ...++++++|||+||+||.++. ..++..+.- .+++.+++.+.. ++.+||
T Consensus 95 ~~~~a~ls~e~Fi~~i-l-------~~~l~~~~ivvG~Df~FG~~r~g~~~~L~~~~~~-g~~V~~v~~~~~--~~~~IS 163 (338)
T 2x0k_A 95 TRELSGTSPEKYVEFL-L-------EDTLHASHVVVGANFTFGENAAGTADSLRQICQS-RLTVDVIDLLDD--EGVRIS 163 (338)
T ss_dssp TTSSSSCCHHHHHHHC-C-------CCCTCEEEEEEETTCEESGGGCEEHHHHHHHTTT-TSEEEEECCCEE--TTEECS
T ss_pred cHHHHhCCHHHHHHHH-H-------HhhcCCCEEEEeecCCCCCCCCCCHHHHHHHhcC-CeEEEEECcEec--CCcccc
Confidence 122333333210 1 1235899999999999997653 334455444 678888888764 688999
Q ss_pred hHHHHHHHHhhcccc
Q 030486 159 SSTLRKLEAEKAKNE 173 (176)
Q Consensus 159 ST~IR~~i~~g~~~~ 173 (176)
||+||++|++|++.+
T Consensus 164 ST~IR~~L~~G~i~~ 178 (338)
T 2x0k_A 164 STTVREFLSEGDVAR 178 (338)
T ss_dssp HHHHHHHHHTTCHHH
T ss_pred cchHHHHHhcCcHHH
Confidence 999999999999764
No 4
>1mrz_A Riboflavin kinase/FMN adenylyltransferase; rossmann fold, flavin binding domain, 6-stranded beta barrel nucleotide binding domain; HET: CIT; 1.90A {Thermotoga maritima} SCOP: b.43.5.1 c.26.1.3 PDB: 1s4m_A* 1t6x_A* 1t6y_A* 1t6z_A* 2i1l_A
Probab=99.92 E-value=1.1e-25 Score=184.01 Aligned_cols=137 Identities=26% Similarity=0.308 Sum_probs=98.6
Q ss_pred eEEEeCcCCcCCHHHHHHHHHHHHHhcCC--eEEEEccCC---CCCCcCcCCCCCCHHHHHHHHHHHH----------Hh
Q 030486 23 AVVLGGTFDRLHDGHRLFLKASAELARDR--IVVGVCDGP---MLTNKQFAELIQPVDERMRNVEAYI----------KS 87 (176)
Q Consensus 23 ~vv~~G~FDgvH~GH~~ll~~a~~~~~~~--~~v~vt~~~---~~~~k~~~~~l~~~~eR~~~l~~~~----------~~ 87 (176)
+++++|+|||+|+||++||++|++.|+.. .++++||++ ++.++ .+.+++|.++|.++++++- +.
T Consensus 1 ~vvtiG~FDgvH~GH~~ll~~a~~~a~~~~~~~vVvtFdphP~~l~~~-~~~~l~~~~eR~~ll~~lg~~~v~~F~~~a~ 79 (293)
T 1mrz_A 1 MVVSIGVFDGVHIGHQKVLRTMKEIAFFRKDDSLIYTISYPPEYFLPD-FPGLLMTVESRVEMLSRYARTVVLDFFRIKD 79 (293)
T ss_dssp -CEEEECCTTCCHHHHHHHHHHHHHHHHHTCCCEEEEESSCGGGGSTT-CCCBSSCHHHHHHHHTTTSCEEEECHHHHTT
T ss_pred CEEEEeeCccccHHHHHHHHHHHHHHHHcCCeEEEEEecCCHHHhCCC-CCCCCCCHHHHHHHHHhCCCEEEEEhHHhhc
Confidence 47899999999999999999999998643 457788874 33222 2356999999999998741 22
Q ss_pred cCCCceEEEeeccCCCCCccccCCccEEEEcCCcccChhhhhhhHHhCCCCceeEEEEeeeecCCCCCeeehHHHHHHHH
Q 030486 88 IKPELVVQTEPITDPYGPSIVDENLEAIVVSKETLPGGLSVNKKRADRGLSQLKIEVVDLVSEGSSGDKLSSSTLRKLEA 167 (176)
Q Consensus 88 ~~~~~~v~~~~l~~~~~~~~~~~~~~~ivvG~d~~fG~~~~~~~~~~~~~~~l~v~~v~~~~~~~~~~~ISST~IR~~i~ 167 (176)
++|++|++. +. ++++++|+|+||+||.++.++...... ..+++.+++.+.. ++.+||||+||++|+
T Consensus 80 ls~~~Fi~~----------il-l~~~~iVvG~Df~fG~~~~g~~~~L~~-~G~~V~~v~~~~~--~~~~iSST~IR~~L~ 145 (293)
T 1mrz_A 80 LTPEGFVER----------YL-SGVSAVVVGRDFRFGKNASGNASFLRK-KGVEVYEIEDVVV--QGKRVSSSLIRNLVQ 145 (293)
T ss_dssp CCHHHHHHH----------HC-TTCCEEEEETTCCBSGGGCBCHHHHHH-TTCEEEEECCCEE--TTEECCHHHHHHHHH
T ss_pred CCHHHHHHH----------Hh-cCCCEEEECCCCCCCCCCCCCHHHHHh-CCCEEEEECCEEe--CCccccHhHHHHHHh
Confidence 333333321 11 589999999999999654433322221 3457888887663 688999999999999
Q ss_pred hhccccC
Q 030486 168 EKAKNEQ 174 (176)
Q Consensus 168 ~g~~~~~ 174 (176)
+|++.+.
T Consensus 146 ~G~i~~a 152 (293)
T 1mrz_A 146 EGRVEEI 152 (293)
T ss_dssp TTCTTTT
T ss_pred cCcHHHH
Confidence 9998753
No 5
>3glv_A Lipopolysaccharide core biosynthesis protein; structural GEN PSI, MCSG, protein structure initiative; HET: AMP; 1.99A {Thermoplasma volcanium GSS1}
Probab=99.91 E-value=2.5e-26 Score=169.79 Aligned_cols=138 Identities=22% Similarity=0.239 Sum_probs=81.7
Q ss_pred CCeEEEeCcCCcCCHHHHHHHHHHHHHhcCCeEEEEccCCCCCCcCcCCCCCCHHHHHHHHHHHHHhcCCCceEEEeecc
Q 030486 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTEPIT 100 (176)
Q Consensus 21 ~~~vv~~G~FDgvH~GH~~ll~~a~~~~~~~~~v~vt~~~~~~~k~~~~~l~~~~eR~~~l~~~~~~~~~~~~v~~~~l~ 100 (176)
+++++++|+|||+|+||+.+|++|++.++ .+++++++++.... +.+.+++|.++|.++++++ ..++ .+....-.
T Consensus 2 m~~v~~~G~FD~vH~GH~~li~~a~~~~~-~~~v~v~~~~~~~~-~~~~~l~~~~eR~~~l~~~-~~vd---~v~~~~~~ 75 (143)
T 3glv_A 2 MIRVMATGVFDILHLGHIHYLKESKKLGD-ELVVVVARDSTARN-NGKIPIFDENSRLALISEL-KVVD---RAILGHEG 75 (143)
T ss_dssp CCEEEEEECCSSCCHHHHHHHHHHHTTSS-EEEEEECCHHHHHH-TTCCCSSCHHHHHHHHTTB-TTCS---EEEECCTT
T ss_pred ceEEEEEeecCCCCHHHHHHHHHHHHhCC-CcEEEEECCcchhh-cCCCCCCCHHHHHHHHHhc-CCCC---EEEEcCch
Confidence 46899999999999999999999999874 47777888753221 2246789999999998874 2121 11110000
Q ss_pred CCCCCccccCCccEEEEcCCcccChhhhhhhHHhCCCCceeEEEEeeeecCCCCCeeehHHHHHHHHhhc
Q 030486 101 DPYGPSIVDENLEAIVVSKETLPGGLSVNKKRADRGLSQLKIEVVDLVSEGSSGDKLSSSTLRKLEAEKA 170 (176)
Q Consensus 101 ~~~~~~~~~~~~~~ivvG~d~~fG~~~~~~~~~~~~~~~l~v~~v~~~~~~~~~~~ISST~IR~~i~~g~ 170 (176)
+ +...+...+++++|+|+||+||...+.......++ .+.+++.+.. ++..||||+||++|.+..
T Consensus 76 ~-f~~~~~~l~~~~iv~G~d~~f~~~~l~~~~~~~g~---~v~vv~~~~~--~~~~iSST~IR~~i~~~~ 139 (143)
T 3glv_A 76 D-MMKTVIEVKPDIITLGYDQKFDEAELQSKINKLGI---TVKIVRISKY--DGQLNSSSSVRKKIMELI 139 (143)
T ss_dssp C-HHHHHHHHCCSEEEECTTCHHHHHHHHHHHHHHTC---CCEEEECCCC--C-----------------
T ss_pred h-HHHHHHhcCCCEEEECCCCCCCHHHHHHHHHHcCC---eEEEEEeecc--CCCcCCHHHHHHHHHHHh
Confidence 1 10012246899999999999997766655555544 4566666553 578899999999997654
No 6
>1o6b_A Phosphopantetheine adenylyltransferase; structural genomics; HET: ADP; 2.20A {Bacillus subtilis} SCOP: c.26.1.3
Probab=99.85 E-value=3.9e-21 Score=145.10 Aligned_cols=136 Identities=18% Similarity=0.173 Sum_probs=88.9
Q ss_pred CCeEEEeCcCCcCCHHHHHHHHHHHHHhcCCeEEEEccCCCCCCcCcCCCCCCHHHHHHHHHHHHHhcCCCceEEEeecc
Q 030486 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTEPIT 100 (176)
Q Consensus 21 ~~~vv~~G~FDgvH~GH~~ll~~a~~~~~~~~~v~vt~~~~~~~k~~~~~l~~~~eR~~~l~~~~~~~~~~~~v~~~~l~ 100 (176)
+++++++|+|||+|+||+.++++|++.+ +.++++++.++ .| ..++|.++|.+|++.++..++ ...+. ..+
T Consensus 2 ~~i~i~~GsFDpvH~GH~~li~~a~~~~-d~v~v~~~~~p---~k---~~l~~~~~R~~ml~~a~~~~~-~v~v~--~~e 71 (169)
T 1o6b_A 2 ASIAVCPGSFDPVTYGHLDIIKRGAHIF-EQVYVCVLNNS---SK---KPLFSVEERCELLREVTKDIP-NITVE--TSQ 71 (169)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHHHS-SEEEEEECCCC---SS---CCSSCHHHHHHHHHHHHTTCT-TEEEE--ECS
T ss_pred CcEEEEEEeeCCCCHHHHHHHHHHHHhC-CEEEEEECCCC---cc---CCCCCHHHHHHHHHHHHhcCC-CEEEc--ccc
Confidence 4689999999999999999999999998 45555444332 23 347899999999999887764 33332 222
Q ss_pred CCCCCccccCCccEEEEcCCcccChhhhhhh---HHhCCCCceeEEEEeeeecCCCCCeeehHHHHHHHHhhc
Q 030486 101 DPYGPSIVDENLEAIVVSKETLPGGLSVNKK---RADRGLSQLKIEVVDLVSEGSSGDKLSSSTLRKLEAEKA 170 (176)
Q Consensus 101 ~~~~~~~~~~~~~~ivvG~d~~fG~~~~~~~---~~~~~~~~l~v~~v~~~~~~~~~~~ISST~IR~~i~~g~ 170 (176)
+.....+..++.+++++|.|+.+|.....+. .+... ..++++.+ +.. .++..||||.||+++++|.
T Consensus 72 ~~~~~~l~~l~~~~~i~G~d~~~~~~~~~~~~~~~r~~~-~~~~~i~~--~~~-~~~~~ISST~IR~~l~~G~ 140 (169)
T 1o6b_A 72 GLLIDYARRKNAKAILRGLRAVSDFEYEMQGTSVNRVLD-ESIETFFM--MAN-NQYSFLSSSIVKEVARYDG 140 (169)
T ss_dssp SCHHHHHHHTTCSEEEEEECSGGGHHHHHHHHHHHHHHC-TTSEEEEE--ECC-STTTTCCHHHHHHHHHTTC
T ss_pred hHHHHHHHHcCCCEEEEcCccccchHHHHHHHHHhcccc-CCCCEEEE--ECC-CCCCcCcHHHHHHHHHcCC
Confidence 1100012245788999999998885432221 22221 12333333 221 1356899999999999984
No 7
>1qjc_A Phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.64A {Escherichia coli} SCOP: c.26.1.3 PDB: 1h1t_A* 1gn8_A* 1b6t_A* 3l92_A* 3l93_A
Probab=99.84 E-value=4.1e-21 Score=143.11 Aligned_cols=134 Identities=14% Similarity=0.221 Sum_probs=91.1
Q ss_pred CeEEEeCcCCcCCHHHHHHHHHHHHHhcCCeEEEEccCCCCCCcCcCCCCCCHHHHHHHHHHHHHhcCCCceEEEeeccC
Q 030486 22 GAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTEPITD 101 (176)
Q Consensus 22 ~~vv~~G~FDgvH~GH~~ll~~a~~~~~~~~~v~vt~~~~~~~k~~~~~l~~~~eR~~~l~~~~~~~~~~~~v~~~~l~~ 101 (176)
++++++|+|||+|+||+.++++|++.+ +.+++++++++ .| ..+++.++|++|++.++..++ ...+.. .+.
T Consensus 2 ~i~i~~GsFDpvH~GH~~l~~~a~~~~-d~v~v~~~~~p---~k---~~~~~~~~R~~ml~~a~~~~~-~v~v~~--~~~ 71 (158)
T 1qjc_A 2 KRAIYPGTFDPITNGHIDIVTRATQMF-DHVILAIAASP---SK---KPMFTLEERVALAQQATAHLG-NVEVVG--FSD 71 (158)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHTTS-SEEEEEEESCC---SS---CCSSCHHHHHHHHHHHTTTCT-TEEEEE--ECS
T ss_pred CEEEEEecCCCCCHHHHHHHHHHHHhC-CEEEEEECCCC---CC---CCCCCHHHHHHHHHHHHhcCC-CeEEcc--cch
Confidence 578999999999999999999999988 46777788864 23 247899999999999877654 333332 211
Q ss_pred CCCCccccCCccEEEEcCCcccChhhhhhhH---HhCCCCceeEEEEeeeecCCCC-CeeehHHHHHHHHhhc
Q 030486 102 PYGPSIVDENLEAIVVSKETLPGGLSVNKKR---ADRGLSQLKIEVVDLVSEGSSG-DKLSSSTLRKLEAEKA 170 (176)
Q Consensus 102 ~~~~~~~~~~~~~ivvG~d~~fG~~~~~~~~---~~~~~~~l~v~~v~~~~~~~~~-~~ISST~IR~~i~~g~ 170 (176)
.....+...+.+++++|.|+.++........ +..+. . +..+..+.. ++ ..||||.||+++++|.
T Consensus 72 ~~~~~l~~l~~~~~v~G~d~~~~~~~~~~~~~~~r~~~~-~--~~~i~~~~~--~~~~~iSST~IR~~i~~g~ 139 (158)
T 1qjc_A 72 LMANFARNQHATVLIRGLRAVADFEYEMQLAHMNRHLMP-E--LESVFLMPS--KEWSFISSSLVKEVARHQG 139 (158)
T ss_dssp CHHHHHHHTTCCEEEEECCTTCCHHHHHHHHHHHHHHCT-T--SEEEEECCC--GGGTTCCHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEEeccchhhhHHHHHHHHhCccCCC-C--CCEEEEECC--CCCCccCHHHHHHHHHcCC
Confidence 1001122457889999999888865433221 22211 2 223333332 34 5799999999999985
No 8
>2b7l_A Glycerol-3-phosphate cytidylyltransferase; rossmann fold; 3.00A {Staphylococcus aureus}
Probab=99.84 E-value=1.1e-21 Score=142.55 Aligned_cols=128 Identities=16% Similarity=0.230 Sum_probs=69.5
Q ss_pred CeEEEeCcCCcCCHHHHHHHHHHHHHhcCCeEEEEccCCCCCCcCcCCCCCCHHHHHHHHHHHHHhcCCCceEEEeeccC
Q 030486 22 GAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTEPITD 101 (176)
Q Consensus 22 ~~vv~~G~FDgvH~GH~~ll~~a~~~~~~~~~v~vt~~~~~~~k~~~~~l~~~~eR~~~l~~~~~~~~~~~~v~~~~l~~ 101 (176)
++++++|+|||+|+||+.++++|++.++ .+++++++++....+. ..+++|.++|.+|+++ +..++ .+.. ..
T Consensus 2 ~~~~~~G~FDp~H~GH~~li~~a~~~~~-~~~v~v~~~~~~~~~~-~~~l~~~~eR~~~l~~-~~~~d---~v~~---~~ 72 (132)
T 2b7l_A 2 KRVITYGTYDLLHYGHIELLRRAREMGD-YLIVALSTDEFNQIKH-KKSYYDYEQRKMMLES-IRYVD---LVIP---EK 72 (132)
T ss_dssp CEEEEEECCCSCCHHHHHHHHHHHHTSS-EEEEEEECHHHHHHTT-CCCSSCHHHHHHHHHT-BTTCC---EEEE---EC
T ss_pred eEEEEeeecCcCCHHHHHHHHHHHHhCC-cEEEEEECCHHHhccC-CCCCCCHHHHHHHHHh-cCCCC---EEEE---CC
Confidence 5789999999999999999999999985 5778889876221111 2458999999999984 33222 1211 11
Q ss_pred CCCCc---cccCCccEEEEcCCcccChhhhhhhHHhCCCCceeEEEEeeeecCCCCCeeehHHHHHHHHhhccc
Q 030486 102 PYGPS---IVDENLEAIVVSKETLPGGLSVNKKRADRGLSQLKIEVVDLVSEGSSGDKLSSSTLRKLEAEKAKN 172 (176)
Q Consensus 102 ~~~~~---~~~~~~~~ivvG~d~~fG~~~~~~~~~~~~~~~l~v~~v~~~~~~~~~~~ISST~IR~~i~~g~~~ 172 (176)
.+... +...+++++|+|.||....+. +... .++..++ .+..||||.||+++.+|..+
T Consensus 73 ~~~~~~~~~~~~~~~~iv~G~D~~~~~~~---L~~~-----~~v~~i~------~~~~iSST~IR~~i~~g~~~ 132 (132)
T 2b7l_A 73 GWGQKEDDVEKFDVDVFVMGHDWEGEFDF---LKDK-----CEVIYLK------RTEGISTTKIKQELYGKDAK 132 (132)
T ss_dssp CGGGHHHHHHHTTCCEEEECGGGTTTTGG---GTTT-----SEEEECS------SCC-----------------
T ss_pred ChHHHHHHHHHcCCCEEEECCCCcCcHHH---HHhC-----CEEEEEC------CCCCcCHHHHHHHHHhcCCC
Confidence 11111 224678999999999533221 1111 1333333 25679999999999998653
No 9
>2qtr_A Nicotinate (nicotinamide) nucleotide adenylyltran; NAD, nucleotidyltransferase, pyridine nucleotide biosynthesi transferase; HET: NXX; 1.70A {Bacillus anthracis} PDB: 3dv2_A 3mla_A* 3hfj_A* 3mlb_A* 3mmx_A* 3e27_A* 2qtn_A* 2qtm_A*
Probab=99.82 E-value=2.2e-20 Score=143.03 Aligned_cols=142 Identities=21% Similarity=0.162 Sum_probs=86.7
Q ss_pred CCeEEEeCcCCcCCHHHHHHHHHHHHHhcC-CeEEEEccCCCCCCcCcCCCCCCHHHHHHHHHHHHHhcCCCceEEEeec
Q 030486 21 YGAVVLGGTFDRLHDGHRLFLKASAELARD-RIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTEPI 99 (176)
Q Consensus 21 ~~~vv~~G~FDgvH~GH~~ll~~a~~~~~~-~~~v~vt~~~~~~~k~~~~~l~~~~eR~~~l~~~~~~~~~~~~v~~~~l 99 (176)
.++++++|+|||+|+||+.++++|++.+.. .+++.++..+.. |. ...+++.++|++|++.+++..+ ...+...++
T Consensus 2 ~~i~i~~GsFDPvH~GH~~li~~a~~~~~~d~v~~~~~~~~~~--k~-~~~~~~~~~R~~ml~~~~~~~~-~v~v~~~e~ 77 (189)
T 2qtr_A 2 RKIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPPH--KQ-GRNITSVESRLQMLELATEAEE-HFSICLEEL 77 (189)
T ss_dssp CEEEEEEECCSSCCHHHHC-CHHHHHHTTCSEEEEEECSSCTT--CT-TSCCCCHHHHHHHHHHHHTTCT-TEEECCTGG
T ss_pred CeEEEEecCcccccHHHHHHHHHHHHHcCCCEEEEEECCCCCC--cc-CCCCCCHHHHHHHHHHHhCCCC-CEEEehHHh
Confidence 357899999999999999999999998742 355556655433 21 2347999999999999887654 232322222
Q ss_pred cCCCCCccc-----cCCccE------EEEcCCcccChhhhhhhHHhCCCCceeEEEEe-------------eeecCCCCC
Q 030486 100 TDPYGPSIV-----DENLEA------IVVSKETLPGGLSVNKKRADRGLSQLKIEVVD-------------LVSEGSSGD 155 (176)
Q Consensus 100 ~~~~~~~~~-----~~~~~~------ivvG~d~~fG~~~~~~~~~~~~~~~l~v~~v~-------------~~~~~~~~~ 155 (176)
. .-+++++ .++.++ +++|.|+.+|-.+..+...... ...+.+++ .+. .++.
T Consensus 78 ~-~~~~~~~~~~l~~l~~~~p~~~~~~v~G~D~~~~~~~w~~~~~l~~--~~~~~v~~r~~~~~~~~~~v~~~~--~~~~ 152 (189)
T 2qtr_A 78 S-RKGPSYTYDTMLQLTKKYPDVQFHFIIGGDMVEYLPKWYNIEALLD--LVTFVGVARPGYKLRTPYPITTVE--IPEF 152 (189)
T ss_dssp G-SCSCCCHHHHHHHHHHHCTTCEEEEEEEHHHHHHGGGSTTHHHHTT--TCEEEEECCTTCCCCCSSCCEEEC--CCCC
T ss_pred c-CCCCCCHHHHHHHHHHHCCCCCEEEEEehhhhhhhhccCCHHHHHH--hCCEEEEECCCCCccCCceEEEEc--CCCC
Confidence 1 1122322 123334 9999999888433222221111 11222222 111 2456
Q ss_pred eeehHHHHHHHHhhcc
Q 030486 156 KLSSSTLRKLEAEKAK 171 (176)
Q Consensus 156 ~ISST~IR~~i~~g~~ 171 (176)
.||||.||+++++|+-
T Consensus 153 ~iSST~IR~~l~~g~~ 168 (189)
T 2qtr_A 153 AVSSSLLRERYKEKKT 168 (189)
T ss_dssp CCCHHHHHHHHHTTCC
T ss_pred ccCHHHHHHHHHcCCC
Confidence 8999999999999863
No 10
>1coz_A Protein (glycerol-3-phosphate cytidylyltransferase); HET: CTP; 2.00A {Bacillus subtilis} SCOP: c.26.1.2 PDB: 1n1d_A*
Probab=99.81 E-value=1.3e-20 Score=136.19 Aligned_cols=124 Identities=22% Similarity=0.314 Sum_probs=79.7
Q ss_pred CeEEEeCcCCcCCHHHHHHHHHHHHHhcCCeEEEEccCCCCCCcCcCCCCCCHHHHHHHHHHHHHhcCCCceEEEeeccC
Q 030486 22 GAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTEPITD 101 (176)
Q Consensus 22 ~~vv~~G~FDgvH~GH~~ll~~a~~~~~~~~~v~vt~~~~~~~k~~~~~l~~~~eR~~~l~~~~~~~~~~~~v~~~~l~~ 101 (176)
++++++|+|||+|+||+.++++|++.+ +.+++++++++....+. ..+++|.++|.+|+++ +..++ ..++. .
T Consensus 2 ~~~~~~G~FDp~H~GH~~li~~a~~~~-d~~~v~v~~~~~~~~~~-~~~l~~~~eR~~~l~~-~~~~d-~v~~~-----~ 72 (129)
T 1coz_A 2 KKVITYGTFDLLHWGHIKLLERAKQLG-DYLVVAISTDEFNLQKQ-KKAYHSYEHRKLILET-IRYVD-EVIPE-----K 72 (129)
T ss_dssp CEEEEEECCCSCCHHHHHHHHHHHTTS-SEEEEEEECHHHHHHHT-CCCSSCHHHHHHHHTT-BTTCC-EEEEE-----C
T ss_pred cEEEEEEeCCCCCHHHHHHHHHHHHhC-CCeEEEEECCHHHhcCC-CCCCCCHHHHHHHHHh-cCCCC-EEEeC-----C
Confidence 578999999999999999999999988 45778889875211121 2458999999999984 33222 11111 1
Q ss_pred CCCCc---cccCCccEEEEcCCcccChhhhhhhHHhCCCCceeEEEEeeeecCCCCCeeehHHHHHHHHh
Q 030486 102 PYGPS---IVDENLEAIVVSKETLPGGLSVNKKRADRGLSQLKIEVVDLVSEGSSGDKLSSSTLRKLEAE 168 (176)
Q Consensus 102 ~~~~~---~~~~~~~~ivvG~d~~fG~~~~~~~~~~~~~~~l~v~~v~~~~~~~~~~~ISST~IR~~i~~ 168 (176)
.+... +...+++++++|.||...... +.. ..++.+++ .+..||||.||+++++
T Consensus 73 ~~~~~~~~l~~~~~~~iv~G~D~~~~~~~---L~~-----~~~v~~~~------~~~~iSST~IR~~i~~ 128 (129)
T 1coz_A 73 NWEQKKQDIIDHNIDVFVMGDDWEGKFDF---LKD-----QCEVVYLP------RTEGISTTKIKEEIAG 128 (129)
T ss_dssp CSTTHHHHHHHTTCSEEEEEGGGTTTTGG---GTT-----TSEEEEEC------CCTTCCHHHHHHTC--
T ss_pred CHHHHHHHHHHhCCcEEEECCCCCCcHHH---HHh-----CCeEEEcC------CCCCcCHHHHHHHHHh
Confidence 11111 223578999999998533221 111 12344443 2567999999998753
No 11
>3k9w_A Phosphopantetheine adenylyltransferase; niaid, ssgcid, seattle structural genomics center for infect disease, coenzyme A, COA; HET: 4PS ADE PG4; 1.60A {Burkholderia pseudomallei} PDB: 3ikz_A* 3pxu_A*
Probab=99.81 E-value=1.3e-19 Score=139.28 Aligned_cols=136 Identities=18% Similarity=0.203 Sum_probs=90.7
Q ss_pred CCCeEEEeCcCCcCCHHHHHHHHHHHHHhcCCeEEEEccCCCCCCcCcCCCCCCHHHHHHHHHHHHHhcCCCceEEEeec
Q 030486 20 SYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTEPI 99 (176)
Q Consensus 20 ~~~~vv~~G~FDgvH~GH~~ll~~a~~~~~~~~~v~vt~~~~~~~k~~~~~l~~~~eR~~~l~~~~~~~~~~~~v~~~~l 99 (176)
++++++++|+|||+|+||+.++++|++.+ +.++++++.++ .| .++++.++|.+|++.+++.++ ...+. ..
T Consensus 21 ~mki~v~~GsFDpiH~GHl~li~~A~~~~-d~viv~v~~~p---~K---~~l~s~eeR~~ml~~~~~~v~-~v~v~--~f 90 (187)
T 3k9w_A 21 SMVVAVYPGTFDPLTRGHEDLVRRASSIF-DTLVVGVADSR---AK---KPFFSLEERLKIANEVLGHYP-NVKVM--GF 90 (187)
T ss_dssp CCCEEEEEECCTTCCHHHHHHHHHHHHHS-SEEEEEEECCG---GG---CCSSCHHHHHHHHHHHHTTCT-TEEEE--EE
T ss_pred CcEEEEEEEeCCcCcHHHHHHHHHHHHHC-CcEEEEEecCC---cc---CCCCCHHHHHHHHHHHhccCC-cEEEE--ec
Confidence 46899999999999999999999999998 45777777653 22 458999999999999887764 33332 22
Q ss_pred cCCCCCccccCCccEEEEc----CCcccChhhhhhhHHhCCCCceeEEEEeeeecCCCCCeeehHHHHHHHHhhc
Q 030486 100 TDPYGPSIVDENLEAIVVS----KETLPGGLSVNKKRADRGLSQLKIEVVDLVSEGSSGDKLSSSTLRKLEAEKA 170 (176)
Q Consensus 100 ~~~~~~~~~~~~~~~ivvG----~d~~fG~~~~~~~~~~~~~~~l~v~~v~~~~~~~~~~~ISST~IR~~i~~g~ 170 (176)
.+.....+...+++++|+| .||.+.... ...++..+ ..+ .++-+... .+...||||.||+.++.|.
T Consensus 91 ~~~~~d~l~~l~~~~iv~G~r~~~Df~~E~~l-a~~nr~l~-~~i--etv~l~~~-~~~~~ISST~IRe~~~~g~ 160 (187)
T 3k9w_A 91 TGLLKDFVRANDARVIVRGLRAVSDFEYEFQM-AGMNRYLL-PDV--ETMFMTPS-DQYQFISGTIVREIAQLGG 160 (187)
T ss_dssp SSCHHHHHHHTTCSEEEEECCTTSCHHHHHHH-HHHHHHHC-TTC--EEEEECCC-GGGTTCCHHHHHHHHHTTC
T ss_pred hhhHHHHHHHcCCCEEEECCCcccccchHHHH-HHHHHHhC-CCC--cEEEEecc-cccccccHHHHHHHHHcCC
Confidence 1110011234688999999 888766432 22222211 222 33333221 1246899999999998864
No 12
>1kam_A Deamido-NAD(+), nicotinate-nucleotide adenylyltransferase; rossman fold; 2.10A {Bacillus subtilis} SCOP: c.26.1.3 PDB: 1kaq_A*
Probab=99.79 E-value=1.6e-19 Score=139.20 Aligned_cols=142 Identities=20% Similarity=0.150 Sum_probs=84.5
Q ss_pred CCCCeEEEeCcCCcCCHHHHHHHHHHHHHhc-CCeEEEEccCCCCCCcCcCCCCCCHHHHHHHHHHHHHhcCCCceEEEe
Q 030486 19 NSYGAVVLGGTFDRLHDGHRLFLKASAELAR-DRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTE 97 (176)
Q Consensus 19 ~~~~~vv~~G~FDgvH~GH~~ll~~a~~~~~-~~~~v~vt~~~~~~~k~~~~~l~~~~eR~~~l~~~~~~~~~~~~v~~~ 97 (176)
.|.++++++|+|||+|+||+.++++|++.+. +.+++++++++.. |. ...+++.++|.+|++.+++..+ ...+...
T Consensus 5 ~m~~~~v~~GsFdp~H~GH~~l~~~a~~~~~~d~v~~~~~~~~~~--k~-~~~~~~~~~R~~ml~~a~~~~~-~v~v~~~ 80 (194)
T 1kam_A 5 GSKKIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQIPPH--KQ-NEDYTDSFHRVEMLKLAIQSNP-SFKLELV 80 (194)
T ss_dssp -CCEEEEEEECCSSCCHHHHHHHHHHHHHTTCSEEEEEECCCC------------CHHHHHHHHHHHHTTCT-TEEECCG
T ss_pred CCcEEEEEEeccccccHHHHHHHHHHHHHhCCCEEEEEECCCCCC--cC-CcCCCCHHHHHHHHHHHHcCCC-CeEEeHH
Confidence 3456899999999999999999999999874 2466667776532 21 1357899999999999887764 3333322
Q ss_pred eccCCCCCccc-----cCCcc------EEEEcCCcccChhhhhhh------------HHhCCCCce--eEEEEeeeecCC
Q 030486 98 PITDPYGPSIV-----DENLE------AIVVSKETLPGGLSVNKK------------RADRGLSQL--KIEVVDLVSEGS 152 (176)
Q Consensus 98 ~l~~~~~~~~~-----~~~~~------~ivvG~d~~fG~~~~~~~------------~~~~~~~~l--~v~~v~~~~~~~ 152 (176)
++ +.-+++++ .+..+ ++|+|.|+.++-....+. .+.+....+ .+..++.
T Consensus 81 e~-~~~~~~~t~~~l~~l~~~~p~~~~~~v~G~D~~~~~~~W~~~e~i~~~~~~~v~~R~g~~~~l~~~i~~~~~----- 154 (194)
T 1kam_A 81 EM-EREGPSYTFDTVSLLKQRYPNDQLFFIIGADMIEYLPKWYKLDELLNLIQFIGVKRPGFHVETPYPLLFADV----- 154 (194)
T ss_dssp GG-STTCCCSHHHHHHHHHHHSTTSEEEEEEETTTTTTCCCCHHHHHHHHHSEEEEEECSSCCCCCSSCCEEEEC-----
T ss_pred Hh-cCCCCCChHHHHHHHHHHCCCCcEEEEEecchhhhhccccCHHHHHHhCcEEEEECCCcchhcCCCEEEeCC-----
Confidence 22 11233332 11222 899999998883211111 111111101 2222222
Q ss_pred CCCeeehHHHHHHHHhhc
Q 030486 153 SGDKLSSSTLRKLEAEKA 170 (176)
Q Consensus 153 ~~~~ISST~IR~~i~~g~ 170 (176)
....||||.||+++++|+
T Consensus 155 ~~~~ISST~IR~~i~~g~ 172 (194)
T 1kam_A 155 PEFEVSSTMIRERFKSKK 172 (194)
T ss_dssp CCBCCCHHHHHHHHHHTC
T ss_pred CCCCcCHHHHHHHHHcCC
Confidence 245899999999999885
No 13
>1od6_A PPAT, phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.5A {Thermus thermophilus} SCOP: c.26.1.3
Probab=99.79 E-value=4.4e-19 Score=132.40 Aligned_cols=135 Identities=16% Similarity=0.222 Sum_probs=84.7
Q ss_pred EEEeCcCCcCCHHHHHHHHHHHHHhcCCeEEEEccCCCCCCcCcCCCCCCHHHHHHHHHHHHHhcCCCceEEEeeccCCC
Q 030486 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTEPITDPY 103 (176)
Q Consensus 24 vv~~G~FDgvH~GH~~ll~~a~~~~~~~~~v~vt~~~~~~~k~~~~~l~~~~eR~~~l~~~~~~~~~~~~v~~~~l~~~~ 103 (176)
++++|+|||+|+||+.++++|++.+ +.+++++++++ .|+ ...+++.++|.+|++.++..++ ...+. .+++..
T Consensus 3 ~v~~GsFdp~H~GH~~l~~~a~~~~-d~v~v~~~~~p---~k~-~~~~~~~~~R~~ml~~a~~~~~-~v~v~--~~e~~~ 74 (160)
T 1od6_A 3 VVYPGSFDPLTNGHLDVIQRASRLF-EKVTVAVLENP---SKR-GQYLFSAEERLAIIREATAHLA-NVEAA--TFSGLL 74 (160)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHS-SEEEEEEECC---------CCSSCHHHHHHHHHHHTTTCT-TEEEE--EECSCH
T ss_pred EEEEeeeCCCCHHHHHHHHHHHHHC-CEEEEEEcCCC---CCC-CCCCCCHHHHHHHHHHHhcCCC-CEEEE--ecCchH
Confidence 8999999999999999999999998 45777777654 232 1357899999999998876653 33333 232210
Q ss_pred CCccccCCccEEEEcCCcccChhhhhhh---HHhCCCCceeEEEEeeeecCCCCCeeehHHHHHHHHhhc
Q 030486 104 GPSIVDENLEAIVVSKETLPGGLSVNKK---RADRGLSQLKIEVVDLVSEGSSGDKLSSSTLRKLEAEKA 170 (176)
Q Consensus 104 ~~~~~~~~~~~ivvG~d~~fG~~~~~~~---~~~~~~~~l~v~~v~~~~~~~~~~~ISST~IR~~i~~g~ 170 (176)
...+..++.+++++|.|.......+... .+..+. .+ ..+..+.. ..+..||||.||+++++|+
T Consensus 75 ~~~l~~l~~~~~v~G~d~~~~~~~~~~~~~~~r~~~~-~~--~~i~~~~~-~~~~~ISST~IR~~l~~G~ 140 (160)
T 1od6_A 75 VDFVRRVGAQAIVKGLRAVSDYEYELQMAHLNRQLYP-GL--ETLFILAA-TRYSFVSSTMVKEIARYGG 140 (160)
T ss_dssp HHHHHHTTCSEEEEEECTTSCHHHHHHHHHHHHHHTT-TC--EEEEEECC-GGGTTCCHHHHHHHHHTTC
T ss_pred HHHHHHcCCCEEEEeCCcccchHHHHHHHHhCcCCCC-CC--CEEEEeCC-CCCCcccHHHHHHHHHcCC
Confidence 0112346788999998733222222211 222211 22 23333331 1245799999999999986
No 14
>4f3r_A Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltranferase; 2.25A {Coxiella burnetii}
Probab=99.75 E-value=1.6e-18 Score=130.47 Aligned_cols=135 Identities=16% Similarity=0.162 Sum_probs=84.2
Q ss_pred CCCeEEEeCcCCcCCHHHHHHHHHHHHHhcCCeEEEEccCCCCCCcCcCCCCCCHHHHHHHHHHHHHhcCCCceEEEeec
Q 030486 20 SYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTEPI 99 (176)
Q Consensus 20 ~~~~vv~~G~FDgvH~GH~~ll~~a~~~~~~~~~v~vt~~~~~~~k~~~~~l~~~~eR~~~l~~~~~~~~~~~~v~~~~l 99 (176)
|+++++++|+|||+|.||+.++++|++.+ +.++++++.++ .| .++.+.++|.+|++.++.. +...+.. .
T Consensus 4 mm~i~i~~GsFDPiH~GHl~li~~A~~~~-d~viv~v~~~~---~K---~~~~~~~~R~~m~~~~~~~--~~v~V~~--~ 72 (162)
T 4f3r_A 4 MKPIAIYPGTFDPLTNGHVDIIERALPLF-NKIIVACAPTS---RK---DPHLKLEERVNLIADVLTD--ERVEVLP--L 72 (162)
T ss_dssp -CCEEEEEECCTTCCHHHHHHHHHHGGGC-SEEEEEECCC------------CCHHHHHHHHHHHCCC--TTEEEEE--C
T ss_pred ceEEEEEEEEcCCCCHHHHHHHHHHHHHC-CcEEEEEecCC---cc---CCCCCHHHHHHHHHHhhCC--CCEEEEe--c
Confidence 45789999999999999999999999998 57888888654 23 3578999999999998765 4433432 1
Q ss_pred cCCCCCccccCCccEEEEc----CCcccChhhhhhhHHhCCCCceeEEEEeeeecCCCCCeeehHHHHHHHHhhc
Q 030486 100 TDPYGPSIVDENLEAIVVS----KETLPGGLSVNKKRADRGLSQLKIEVVDLVSEGSSGDKLSSSTLRKLEAEKA 170 (176)
Q Consensus 100 ~~~~~~~~~~~~~~~ivvG----~d~~fG~~~~~~~~~~~~~~~l~v~~v~~~~~~~~~~~ISST~IR~~i~~g~ 170 (176)
...........+++.++.| .||.+... +...++..+ .. ++++-+... .+...||||.||+.++.|.
T Consensus 73 ~~l~~~~~~~~~~~~~v~G~r~~~Df~~e~~-~a~~nr~l~-~~--ietv~l~~~-~~~~~ISST~IRe~~~~g~ 142 (162)
T 4f3r_A 73 TGLLVDFAKTHQANFILRGLRAVSDFDYEFQ-LAHMNYQLS-PE--IETIFLPAR-EGYSYVSGTMVREIVTLGG 142 (162)
T ss_dssp CSCHHHHHHHTTCCEEEEEECSHHHHHHHHH-HHHHHHHHC-TT--CEEEEEECC-GGGSSCCHHHHHHHHHTTC
T ss_pred cchHHHHHHHcCCCEEEECCCchhhhhhHHH-HHHHHHHhC-CC--ccEEEEECC-cccccccHHHHHHHHHcCC
Confidence 1100001224688999998 55543321 111222211 22 233333332 1346899999999998764
No 15
>3f3m_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway, coenzyme A biosynthesis, nucleotidyltransferase; HET: PPS; 2.40A {Staphylococcus aureus} SCOP: c.26.1.0
Probab=99.74 E-value=5.1e-18 Score=128.38 Aligned_cols=135 Identities=20% Similarity=0.231 Sum_probs=83.6
Q ss_pred CCeEEEeCcCCcCCHHHHHHHHHHHHHhcCCeEEEEccCCCCCCcCcCCCCCCHHHHHHHHHHHHHhcCCCceEEEeecc
Q 030486 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTEPIT 100 (176)
Q Consensus 21 ~~~vv~~G~FDgvH~GH~~ll~~a~~~~~~~~~v~vt~~~~~~~k~~~~~l~~~~eR~~~l~~~~~~~~~~~~v~~~~l~ 100 (176)
.++++++|+|||+|+||+.++++|++.+ +.++++++.++ .| ..+.+.++|++|++.+++.++ ...++. .+
T Consensus 3 ~ki~i~~GsFDPiH~GHl~i~~~a~~~~-d~viv~v~~~p---~K---~~~~~~~~R~~ml~~a~~~~~-~v~v~~--~e 72 (168)
T 3f3m_A 3 HTIAVIPGSFDPITYGHLDIIERSTDRF-DEIHVCVLKNS---KK---EGTFSLEERMDLIEQSVKHLP-NVKVHQ--FS 72 (168)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHGGGS-SEEEEEECC-----------CCSCHHHHHHHHHHHTTTCT-TEEEEE--CC
T ss_pred ceEEEEEEEcCcCCHHHHHHHHHHHHhC-CEEEEEEcCCC---CC---CCCCCHHHHHHhHHHHhcCCC-CEEEEE--cC
Confidence 3589999999999999999999999998 56778888654 23 357899999999999887764 333432 21
Q ss_pred CCCCCccccCCccEEEEc----CCcccChhhhhhhHHhCCCCceeEEEEeeeecCCCCCeeehHHHHHHHHhhc
Q 030486 101 DPYGPSIVDENLEAIVVS----KETLPGGLSVNKKRADRGLSQLKIEVVDLVSEGSSGDKLSSSTLRKLEAEKA 170 (176)
Q Consensus 101 ~~~~~~~~~~~~~~ivvG----~d~~fG~~~~~~~~~~~~~~~l~v~~v~~~~~~~~~~~ISST~IR~~i~~g~ 170 (176)
.....++...+.++++.| .||..-. .+....+... ... ..|-++.. .....||||.||++++.|.
T Consensus 73 ~~tvd~~~~l~~~~~I~G~d~~~d~~~e~-~~a~~~r~l~-~~~--e~v~l~~~-p~~~~ISST~IRe~~~~g~ 141 (168)
T 3f3m_A 73 GLLVDYCEQVGAKTIIRGLRAVSDFEYEL-RLTSMNKKLN-NEI--ETLYMMSS-TNYSFISSSIVKEVAAYRA 141 (168)
T ss_dssp SCHHHHHHHHTCCEEEEEECTTCCHHHHH-HHHHHHHHHC-TTS--EEEEEECC-TTTTTCCHHHHHHHHHTTC
T ss_pred CCHHHHHHHcCCCEEEEcCCchhhhhHHH-HHhHHhHhhC-CCC--cEEEEeCC-cccccccHHHHHHHHHcCC
Confidence 100011224578899999 4543221 1111222211 122 22333322 1233499999999998874
No 16
>1ej2_A Nicotinamide mononucleotide adenylyltransferase; dinucleotide binding fold, structural genomics, PSI; HET: NAD; 1.90A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.26.1.3 PDB: 1m8g_A* 1hyb_A* 1m8j_A* 1m8f_A* 1m8k_A*
Probab=99.74 E-value=1.3e-17 Score=127.26 Aligned_cols=131 Identities=14% Similarity=0.166 Sum_probs=81.8
Q ss_pred CeEEEeCcCCcCCHHHHHHHHHHHHHhcCCeEEEE-ccCCCCCCcCcCCCCCCHHHHHHHHHHHHHhcC-CCceEEEeec
Q 030486 22 GAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGV-CDGPMLTNKQFAELIQPVDERMRNVEAYIKSIK-PELVVQTEPI 99 (176)
Q Consensus 22 ~~vv~~G~FDgvH~GH~~ll~~a~~~~~~~~~v~v-t~~~~~~~k~~~~~l~~~~eR~~~l~~~~~~~~-~~~~v~~~~l 99 (176)
++++++|+|||+|+||+.++++|++.++ .+++++ ++++. .++ ..++|.++|.+|++.++...+ +..++.+...
T Consensus 4 ~~~i~~G~Fdp~H~GH~~l~~~a~~~~d-~v~v~v~~~~~p--~~~--~~~~~~~~R~~~~~~a~~~~~~~~~~v~v~~~ 78 (181)
T 1ej2_A 4 MRGLLVGRMQPFHRGHLQVIKSILEEVD-ELIICIGSAQLS--HSI--RDPFTAGERVMMLTKALSENGIPASRYYIIPV 78 (181)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHTTTCS-EEEEEECSTTCC--SSS--SSCSCHHHHHHHHHHHHHHTTCCGGGEEEEEC
T ss_pred eEEEEEEEcCCcCHHHHHHHHHHHHhCC-eeEEEECCCCCC--cCC--CCCCCHHHHHHHHHHHHhhCCCCCCcEEEEec
Confidence 5799999999999999999999999863 566656 66542 222 336799999999999987653 0112222222
Q ss_pred cCCCCCc-cc------cCCccEEEEcCCcccChhhhhhhHHhCCCCceeEEEEeeeecCCCCCeeehHHHHHHHHhhc
Q 030486 100 TDPYGPS-IV------DENLEAIVVSKETLPGGLSVNKKRADRGLSQLKIEVVDLVSEGSSGDKLSSSTLRKLEAEKA 170 (176)
Q Consensus 100 ~~~~~~~-~~------~~~~~~ivvG~d~~fG~~~~~~~~~~~~~~~l~v~~v~~~~~~~~~~~ISST~IR~~i~~g~ 170 (176)
++..... +. ...++.+++|.|+. .....+.++ .+..++. .++..||||.||+++++|.
T Consensus 79 d~~~~~~~w~~~~~~l~~~~~~~v~gr~~~------~~~~~~~~i---~~~~~~~----~~~~~ISST~IR~~l~~G~ 143 (181)
T 1ej2_A 79 QDIECNALWVGHIKMLTPPFDRVYSGNPLV------QRLFSEDGY---EVTAPPL----FYRDRYSGTEVRRRMLDDG 143 (181)
T ss_dssp CCCSCHHHHHHHHHHHSCCCSEEECCCHHH------HHHHHHTTC---CEECCCC----SSTTTSSHHHHHHHHHHTC
T ss_pred CccCCHHHHHHHHHHHCCCCCEEEECCHHH------HHHHHhCCe---EEEecCC----CccCcCcHHHHHHHHHcCC
Confidence 2211111 10 12567788877651 112222222 3333332 2466799999999999875
No 17
>3nv7_A Phosphopantetheine adenylyltransferase; helicobacter pylori 26695 strain, mutant I4V/N76Y, phosphopa adenylyltransferase; 1.75A {Helicobacter pylori} PDB: 3otw_A*
Probab=99.73 E-value=1e-18 Score=130.86 Aligned_cols=134 Identities=20% Similarity=0.234 Sum_probs=86.9
Q ss_pred CCeEEEeCcCCcCCHHHHHHHHHHHHHhcCCeEEEEccCCCCCCcCcCCCCCCHHHHHHHHHHHHHhcCCCceEEEeecc
Q 030486 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTEPIT 100 (176)
Q Consensus 21 ~~~vv~~G~FDgvH~GH~~ll~~a~~~~~~~~~v~vt~~~~~~~k~~~~~l~~~~eR~~~l~~~~~~~~~~~~v~~~~l~ 100 (176)
+++++++|+|||+|+||+.++++|++.+ +.++|+++.++ .| .++.+.++|.+|++.+++.++ ...+. ...
T Consensus 2 m~i~i~~GsFDPiH~GHl~ii~~A~~~~-D~viv~v~~~~---~K---~~~~~~~eR~~ml~~a~~~~~-~v~v~--~~~ 71 (157)
T 3nv7_A 2 QKVGIYPGTFDPVTNGHIDIIHRSSELF-EKLIVAVAHSS---AK---NPMFSLDERLKMIQLATKSFK-NVECV--AFE 71 (157)
T ss_dssp -CEEEEEECCTTCCHHHHHHHHHHHTTS-SEEEEEEECCG---GG---CCSSCHHHHHHHHHHHHTTST-TEEEE--EEC
T ss_pred CEEEEEEEEcCCCCHHHHHHHHHHHHhC-CceEEEEccCC---CC---CCCCCHHHHHHHHHHHhcCCC-cEEEE--ecC
Confidence 4689999999999999999999999998 56777777654 23 357899999999999887764 33332 221
Q ss_pred CCCCCccccCCccEEEEc----CCcccChhhhhhhHHhCCCCceeEEEEeeeecCCCCCeeehHHHHHHHHhh
Q 030486 101 DPYGPSIVDENLEAIVVS----KETLPGGLSVNKKRADRGLSQLKIEVVDLVSEGSSGDKLSSSTLRKLEAEK 169 (176)
Q Consensus 101 ~~~~~~~~~~~~~~ivvG----~d~~fG~~~~~~~~~~~~~~~l~v~~v~~~~~~~~~~~ISST~IR~~i~~g 169 (176)
..........+++.++-| .||.+.-+... .++.-+ ..+ +++-+... .+...||||.||+.+..|
T Consensus 72 ~l~~~~~~~~~~~~ivrG~r~~~D~~ye~~~a~-~n~~l~-~~i--etv~l~~~-~~~~~iSSt~vRe~~~~g 139 (157)
T 3nv7_A 72 GLLAYLAKEYHCKVLVRGLRVVSDFEYELQMGY-ANKSLN-HEL--ETLYFMPT-LQNAFISSSIVRSIIAHK 139 (157)
T ss_dssp SCHHHHHHHTTCCCBCCCCSCCCCHHHHHHHHH-HHHHSS-CCC--CCCCCCCC-HHHHTCCHHHHHHHHHTT
T ss_pred chHHHHHHHcCCCEEEECCcccchhhhhHHHHH-HHHHhC-CCc--eEEEEcCC-cccceeeHHHHHHHHHcC
Confidence 111011234688999988 77765533221 222211 122 22222221 123579999999999875
No 18
>3h05_A Uncharacterized protein VPA0413; nucleotidylyl, transferase, MCSG, midwest center for structu genomics, PSI; 1.65A {Vibrio parahaemolyticus}
Probab=99.73 E-value=6.1e-18 Score=128.98 Aligned_cols=137 Identities=15% Similarity=0.112 Sum_probs=85.3
Q ss_pred CCeEEEeCcCCcCCHHHHHHHHHHHHHhcCCeEEEEccCCCCCCcCcCCCCCCHHHHHHHHHHHHHhcC-CCceEEEeec
Q 030486 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIK-PELVVQTEPI 99 (176)
Q Consensus 21 ~~~vv~~G~FDgvH~GH~~ll~~a~~~~~~~~~v~vt~~~~~~~k~~~~~l~~~~eR~~~l~~~~~~~~-~~~~v~~~~l 99 (176)
.++++++|||||+|.||+.+++ |.+.. +.++++++.+.. .+ +.+.+.++|++|++.++++.+ +...++.++.
T Consensus 2 ~~igi~gGsFdPih~GHl~i~~-a~~~~-d~v~~~p~~~~~--~k---~~~~~~~~R~~m~~~a~~~~~~~~~~v~~~E~ 74 (177)
T 3h05_A 2 KKIAIFGSAFNPPSLGHKSVIE-SLSHF-DLVLLEPSIAHA--WG---KNMLDYPIRCKLVDAFIKDMGLSNVQRSDLEQ 74 (177)
T ss_dssp CEEEEEEECCSSCCHHHHHHHT-TCTTS-SEEEEEECC------------CCCHHHHHHHHHHHHHHHCCTTEEECCHHH
T ss_pred cEEEEEEeccchhhHHHHHHHH-HHHHC-CEEEEEECCCCC--CC---CCCCCHHHHHHHHHHHHhcCCCCcEEEEehhh
Confidence 4689999999999999999998 76655 567666776421 12 346899999999999998864 3444433332
Q ss_pred c-CCCC-CccccCCccEEE---EcCC--cccChhhhhhhHHhCCCCce----eEEEEeeeecCCCCCeeehHHHHHHHHh
Q 030486 100 T-DPYG-PSIVDENLEAIV---VSKE--TLPGGLSVNKKRADRGLSQL----KIEVVDLVSEGSSGDKLSSSTLRKLEAE 168 (176)
Q Consensus 100 ~-~~~~-~~~~~~~~~~iv---vG~d--~~fG~~~~~~~~~~~~~~~l----~v~~v~~~~~~~~~~~ISST~IR~~i~~ 168 (176)
. ..-+ ++++...++.+- -..+ |..|+|.+..+..|.+++.+ .+.+++ ....||||.||+++++
T Consensus 75 ~l~~~~~~syT~dTl~~l~~~~p~~~~~~iiG~D~l~~l~~W~~~~~l~~~~~~vv~~------r~~~iSST~IR~~i~~ 148 (177)
T 3h05_A 75 ALYQPGQSVTTYALLEKIQEIYPTADITFVIGPDNFFKFAKFYKAEEITERWTVMACP------EKVKIRSTDIRNALIE 148 (177)
T ss_dssp HHC----CCCHHHHHHHHHHHSTTSEEEEEECHHHHHTGGGSTTHHHHHHHSEEEECC------CSSCCCHHHHHHHHHH
T ss_pred hcccCCCCcchHHHHHHHHHHhcCCCeEEEEecchhhhcccchhHHHHHHhCCEEEEc------CCCCCcHHHHHHHHHc
Confidence 1 0123 555411111110 0111 33677777667788776543 444443 2468999999999998
Q ss_pred hc
Q 030486 169 KA 170 (176)
Q Consensus 169 g~ 170 (176)
|+
T Consensus 149 g~ 150 (177)
T 3h05_A 149 GK 150 (177)
T ss_dssp TC
T ss_pred CC
Confidence 85
No 19
>2h29_A Probable nicotinate-nucleotide adenylyltransferase; NADD, namnat, nmnat; HET: DND; 2.00A {Staphylococcus aureus} PDB: 2h2a_A*
Probab=99.72 E-value=4.1e-18 Score=130.73 Aligned_cols=139 Identities=16% Similarity=0.150 Sum_probs=83.9
Q ss_pred CCeEEEeCcCCcCCHHHHHHHHHHHHHhc-CCeEEEEccCCCCCCcCcCCCCCCHHHHHHHHHHHHHhcCCCceEEEeec
Q 030486 21 YGAVVLGGTFDRLHDGHRLFLKASAELAR-DRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTEPI 99 (176)
Q Consensus 21 ~~~vv~~G~FDgvH~GH~~ll~~a~~~~~-~~~~v~vt~~~~~~~k~~~~~l~~~~eR~~~l~~~~~~~~~~~~v~~~~l 99 (176)
+++++++|+|||+|+||+.++++|++.+. +.+++.++.++..+ .. ..+++.++|.+|++.+++..+ ...++.+++
T Consensus 2 ~~~~v~~GsFdp~H~GH~~l~~~a~~~~~~d~v~~~~~~~~~~k--~~-~~~~~~~~R~~m~~~a~~~~~-~v~v~~~e~ 77 (189)
T 2h29_A 2 KKIVLYGGQFNPIHTAHMIVASEVFHELQPDEFYFLPSFMSPLK--KH-HDFIDVQHRLTMIQMIIDELG-FGDICDDEI 77 (189)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHHCCSEEEEEECSBCTTS--CC-CSSCCCHHHHHHHHHHHHHHT-CCEECCHHH
T ss_pred ceEEEEEecCCcccHHHHHHHHHHHHHcCCCEEEEEECCCCCCC--cC-CCCCCHHHHHHHHHHHHcCCC-CEEEehHHh
Confidence 35789999999999999999999999874 23444455544332 11 347899999999999888764 333433322
Q ss_pred cCCCCCccccCC--------cc---EEEEcCCcccChhhhhhhHHhCCCCc----eeEEEEeeeec-----------CCC
Q 030486 100 TDPYGPSIVDEN--------LE---AIVVSKETLPGGLSVNKKRADRGLSQ----LKIEVVDLVSE-----------GSS 153 (176)
Q Consensus 100 ~~~~~~~~~~~~--------~~---~ivvG~d~~fG~~~~~~~~~~~~~~~----l~v~~v~~~~~-----------~~~ 153 (176)
. .-+++++... ++ ++++|.|. +.++..|.+.+. ..+.+++.... ..+
T Consensus 78 ~-~~~~syt~dtl~~l~~~~p~~~~~~i~G~D~------~~~~~~W~~~~~i~~~~~~~v~~R~~~~~~~~~~i~~~~~~ 150 (189)
T 2h29_A 78 K-RGGQSYTYDTIKAFKEQHKDSELYFVIGTDQ------YNQLEKWYQIEYLKEMVTFVVVNRDKNSQNVENAMIAIQIP 150 (189)
T ss_dssp H-HCSBCCHHHHHHHHHHHSTTEEEEEEEEHHH------HTTGGGSTTHHHHHHHCEEEEECCSSSCCCCCTTSEEECCC
T ss_pred c-CCCCCCHHHHHHHHHHHCCCCcEEEEEecch------hhhhccccCHHHHHhhCcEEEEECCCCccccCCcEEEEcCC
Confidence 1 1234433111 22 66766553 333444443321 23333332110 012
Q ss_pred CCeeehHHHHHHHHhhc
Q 030486 154 GDKLSSSTLRKLEAEKA 170 (176)
Q Consensus 154 ~~~ISST~IR~~i~~g~ 170 (176)
...||||.||++++.|.
T Consensus 151 ~~~ISST~IR~~i~~g~ 167 (189)
T 2h29_A 151 RVDISSTMIRQRVSEGK 167 (189)
T ss_dssp CBCCCHHHHHHHHHTTC
T ss_pred CCccCHHHHHHHHHcCC
Confidence 36799999999999874
No 20
>3nbk_A Phosphopantetheine adenylyltransferase; PPAT, PHP; HET: PNS; 1.58A {Mycobacterium tuberculosis} PDB: 3nba_A* 3pnb_A* 4e1a_A 3lcj_A 3rba_A* 1tfu_A* 3rff_A 3rhs_A* 3uc5_A*
Probab=99.71 E-value=3.7e-17 Score=124.40 Aligned_cols=134 Identities=19% Similarity=0.150 Sum_probs=85.8
Q ss_pred CCCeEEEeCcCCcCCHHHHHHHHHHHHHhcCCeEEEEccCCCCCCcCcCCCCCCHHHHHHHHHHHHHhcCCCceEEEeec
Q 030486 20 SYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTEPI 99 (176)
Q Consensus 20 ~~~~vv~~G~FDgvH~GH~~ll~~a~~~~~~~~~v~vt~~~~~~~k~~~~~l~~~~eR~~~l~~~~~~~~~~~~v~~~~l 99 (176)
.+++++++|+|||+|+||+.++++|++.+ +.++++++.++ .| ..+.+.++|++|++.+++..+ ...++. .
T Consensus 20 ~mki~i~~GsFDPiH~GHl~ii~~A~~~~-D~Viv~v~~np---~K---~~~~s~eeR~~mv~~a~~~~~-~v~V~~--~ 89 (177)
T 3nbk_A 20 HMTGAVCPGSFDPVTLGHVDIFERAAAQF-DEVVVAILVNP---AK---TGMFDLDERIAMVKESTTHLP-NLRVQV--G 89 (177)
T ss_dssp CCCEEEEEECCTTCCHHHHHHHHHHHHHS-SEEEEEECCCT---TS---CCSSCHHHHHHHHHHHCTTCT-TEEEEE--C
T ss_pred CCEEEEEEEeeCCCCHHHHHHHHHHHHHC-CEEEEEEcCCC---CC---CCCCCHHHHHHHHHHHhCCCC-CEEEEe--c
Confidence 35789999999999999999999999998 57888888654 33 347899999999999877753 343432 2
Q ss_pred cCCCCCccccCCccEEEEc----CCcccChhhhhhhHHhCCCCceeEEEEeeeecCCCCCeeehHHHHHHHHhh
Q 030486 100 TDPYGPSIVDENLEAIVVS----KETLPGGLSVNKKRADRGLSQLKIEVVDLVSEGSSGDKLSSSTLRKLEAEK 169 (176)
Q Consensus 100 ~~~~~~~~~~~~~~~ivvG----~d~~fG~~~~~~~~~~~~~~~l~v~~v~~~~~~~~~~~ISST~IR~~i~~g 169 (176)
+..........+.++++-| .||.+--+ ....++.. ..+ ++|-+... .....||||.||+.++.|
T Consensus 90 e~l~vd~~~~~~a~~ivrGlr~~~Dfeye~~-~a~~nr~l--~~i--etvfl~~~-~~~~~ISST~IRe~~~~g 157 (177)
T 3nbk_A 90 HGLVVDFVRSCGMTAIVKGLRTGTDFEYELQ-MAQMNKHI--AGV--DTFFVATA-PRYSFVSSSLAKEVAMLG 157 (177)
T ss_dssp CSCHHHHHHHTTCCEEEEEECTTCCHHHHHH-HHHHHHHH--HCC--EEEEEECC-GGGSSCCHHHHHHHHHTT
T ss_pred CchHHHHHHHcCCCEEEECCCchhHHHHHHH-HHHHHHhc--CCC--ceEEEeCC-CcccccchHHHHHHHHcC
Confidence 1100011224678899988 55432111 11122211 222 23333221 134679999999999875
No 21
>1k4m_A NAMN adenylyltransferase; nucleotidyltransferase; HET: NAD CIT; 1.90A {Escherichia coli} SCOP: c.26.1.3 PDB: 1k4k_A*
Probab=99.71 E-value=3.3e-17 Score=127.98 Aligned_cols=93 Identities=19% Similarity=0.284 Sum_probs=63.5
Q ss_pred e-EEEeCcCCcCCHHHHHHHHHHHHHhc-CCeEEEEccCCCCCCcCcCCCCCCHHHHHHHHHHHHHhcCCCceEEEeecc
Q 030486 23 A-VVLGGTFDRLHDGHRLFLKASAELAR-DRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTEPIT 100 (176)
Q Consensus 23 ~-vv~~G~FDgvH~GH~~ll~~a~~~~~-~~~~v~vt~~~~~~~k~~~~~l~~~~eR~~~l~~~~~~~~~~~~v~~~~l~ 100 (176)
+ ++++|+|||+|+||+.++++|.+.+. +.+++.++.++.. |. ..+++.++|++|++.+++..+ ...+...++
T Consensus 4 i~~i~~GsFdPiH~GH~~l~~~a~~~~~~d~v~~~~~~~~~~--k~--~~~~~~~~R~~ml~~a~~~~~-~v~v~~~e~- 77 (213)
T 1k4m_A 4 LQALFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPPH--RP--QPEANSVQRKHMLELAIADKP-LFTLDEREL- 77 (213)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHHHHTCSCEEEEECSSCTT--SC--CCSSCHHHHHHHHHHHHTTCT-TEEECCHHH-
T ss_pred EEEEEEeCcCCCCHHHHHHHHHHHHHcCCCEEEEEECCCCCC--CC--CCCCCHHHHHHHHHHHhccCC-CEEEeHHHh-
Confidence 5 89999999999999999999999874 3466666665433 21 247899999999999887764 333332222
Q ss_pred CCCCCccc-----cC----Ccc---EEEEcCCc
Q 030486 101 DPYGPSIV-----DE----NLE---AIVVSKET 121 (176)
Q Consensus 101 ~~~~~~~~-----~~----~~~---~ivvG~d~ 121 (176)
+.-+++++ .. .++ ++++|.|+
T Consensus 78 ~~~~~s~t~~~l~~l~~~~~~~~~~~~i~G~D~ 110 (213)
T 1k4m_A 78 KRNAPSYTAQTLKEWRQEQGPDVPLAFIIGQDS 110 (213)
T ss_dssp HCSSCCCHHHHHHHHHHHHCTTSCEEEEEEHHH
T ss_pred cCCCCCcHHHHHHHHHHHhCCCCcEEEEEehhh
Confidence 11233332 11 566 88888875
No 22
>3nd5_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway; 2.30A {Enterococcus faecalis} SCOP: c.26.1.0 PDB: 3nd6_A* 3nd7_A*
Probab=99.70 E-value=2e-17 Score=125.40 Aligned_cols=137 Identities=19% Similarity=0.223 Sum_probs=81.5
Q ss_pred CCCeEEEeCcCCcCCHHHHHHHHHHHHHhcCCeEEEEccCCCCCCcCcCCCCCCHHHHHHHHHHHHHhcCCCceE-EEee
Q 030486 20 SYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVV-QTEP 98 (176)
Q Consensus 20 ~~~~vv~~G~FDgvH~GH~~ll~~a~~~~~~~~~v~vt~~~~~~~k~~~~~l~~~~eR~~~l~~~~~~~~~~~~v-~~~~ 98 (176)
|+++++++|+|||+|+||+.++++|++.+ +.++++++.++ .| .++.+.++|++|++.+++..+ ...+ +.
T Consensus 1 Mm~i~i~~GsFDPiH~GHl~i~~~a~~~~-D~viv~v~~~~---~K---~~~~~~~~R~~ml~~a~~~~~-~v~v~~~-- 70 (171)
T 3nd5_A 1 MRKIALFPGSFDPMTNGHLNLIERSAKLF-DEVIIGVFINT---SK---QTLFTPEEKKYLIEEATKEMP-NVRVIMQ-- 70 (171)
T ss_dssp CCCEEEEEECCTTCCHHHHHHHHHHHTTC-SEEEEEEEC------------CCCHHHHHHHHHHHHTTCT-TEEEEEE--
T ss_pred CCeEEEEEEEccccCHHHHHHHHHHHHHC-CCeEEEEecCC---CC---CCCCCHHHHHHHHHHHHccCC-CEEEeeC--
Confidence 35789999999999999999999999988 56777776543 23 257899999999999888764 3334 32
Q ss_pred ccCCCCCccccCCccEEEEcCCcccC--h-hhhhhhHHhCCCCceeEEEEeeeecCCCCCeeehHHHHHHHHhhc
Q 030486 99 ITDPYGPSIVDENLEAIVVSKETLPG--G-LSVNKKRADRGLSQLKIEVVDLVSEGSSGDKLSSSTLRKLEAEKA 170 (176)
Q Consensus 99 l~~~~~~~~~~~~~~~ivvG~d~~fG--~-~~~~~~~~~~~~~~l~v~~v~~~~~~~~~~~ISST~IR~~i~~g~ 170 (176)
.+......+...+.++++.|.|.... . ..+...++..+ ...+ +|-+... .....||||.||+.++.|.
T Consensus 71 ~e~~tvd~~~~l~~~~~i~G~~~~~d~~~e~~la~~nr~l~-~~~e--tv~l~~~-~~~~~ISST~IRe~~~~g~ 141 (171)
T 3nd5_A 71 ETQLTVESAKSLGANFLIRGIRNVKDYEYEKDIAKMNQHLA-PEIE--TVFLLAE-EPYAHVSSSLLKEVLRFGG 141 (171)
T ss_dssp CSSCHHHHHHHHTCCEEEEEECSHHHHHHHHHHHHHHHHHC-TTSE--EEEEECC-GGGTTCCHHHHHHHHHTTC
T ss_pred CCCcHHHHHHHCCCCEEEECCCchhhhHHHHHHHHHhhhhc-CCcc--EEEEeCC-ccccccchHHHHHHHHcCC
Confidence 21100001224577889988332111 0 01111222211 1222 2222221 0234799999999998764
No 23
>3hl4_A Choline-phosphate cytidylyltransferase A; rossmann fold, phospholipid synthesis, phosphatidylcholine, phosphocholine, CTP, CDP-choline; HET: CDC; 2.20A {Rattus norvegicus}
Probab=99.70 E-value=1.1e-17 Score=131.88 Aligned_cols=133 Identities=18% Similarity=0.261 Sum_probs=90.0
Q ss_pred CCCeEEEeCcCCcCCHHHHHHHHHHHHHhc-CCeEEEEccCCCCC-CcCcCCCCCCHHHHHHHHHHHHHhcCCCceEEEe
Q 030486 20 SYGAVVLGGTFDRLHDGHRLFLKASAELAR-DRIVVGVCDGPMLT-NKQFAELIQPVDERMRNVEAYIKSIKPELVVQTE 97 (176)
Q Consensus 20 ~~~~vv~~G~FDgvH~GH~~ll~~a~~~~~-~~~~v~vt~~~~~~-~k~~~~~l~~~~eR~~~l~~~~~~~~~~~~v~~~ 97 (176)
...+|++.|+||++|.||+.+|++|++++. +.++|+|++++.+. .|. .++++.+||.++++++ ..++ .+
T Consensus 75 ~~~~V~~~GtFD~~H~GHl~iL~rAk~lf~gD~LIVgV~~D~~v~~~Kg--~pi~s~eER~e~v~~~-k~VD---~V--- 145 (236)
T 3hl4_A 75 RPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKG--FTVMNENERYDAVQHC-RYVD---EV--- 145 (236)
T ss_dssp SCEEEEEEECCTTCCHHHHHHHHHHHTSSSSEEEEEEECCHHHHHHHTC--CCSSCHHHHHHHHHTB-TTCS---EE---
T ss_pred CCeEEEEeccCCCCCHHHHHHHHHHHHhcCCCeEEEEEcccHHHhhcCC--CCCCCHHHHHHHHHHh-CCCC---eE---
Confidence 345799999999999999999999999863 46889999886443 232 4589999999999864 2222 12
Q ss_pred eccCCCCCc---cccCCccEEEEcCCcccChhh--h-hhhHHhCCCCceeEEEEeeeecCCCCCeeehHHHHHHHHhhcc
Q 030486 98 PITDPYGPS---IVDENLEAIVVSKETLPGGLS--V-NKKRADRGLSQLKIEVVDLVSEGSSGDKLSSSTLRKLEAEKAK 171 (176)
Q Consensus 98 ~l~~~~~~~---~~~~~~~~ivvG~d~~fG~~~--~-~~~~~~~~~~~l~v~~v~~~~~~~~~~~ISST~IR~~i~~g~~ 171 (176)
.+..+++.. +...++++++.|.++.++... . ..+..+ +. +..++ . ...||||.|+++|.++..
T Consensus 146 vv~~p~~l~~d~i~~~~~d~Vv~GDd~~~~~~~~d~y~~lk~~-G~----~~~v~--r----t~giSTT~Ii~RI~~~~~ 214 (236)
T 3hl4_A 146 VRNAPWTLTPEFLAEHRIDFVAHDDIPYSSAGSDDVYKHIKEA-GM----FAPTQ--R----TEGISTSDIITRIVRDYD 214 (236)
T ss_dssp ESSCCSSCCHHHHHHTTCCEEEEESSCCCCSSCSCTTHHHHHT-TC----EEEEC--C----CTTCCHHHHHHHHHHHHH
T ss_pred EECCcCcCcHHHHHHcCCCEEEECCccccCCCchhHHHHHHhC-Ce----EEEec--c----CCCCCHHHHHHHHHHhHH
Confidence 222334332 235799999999998876332 1 112222 22 22223 3 345999999999988764
Q ss_pred c
Q 030486 172 N 172 (176)
Q Consensus 172 ~ 172 (176)
.
T Consensus 215 ~ 215 (236)
T 3hl4_A 215 V 215 (236)
T ss_dssp C
T ss_pred H
Confidence 3
No 24
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.68 E-value=7.4e-17 Score=133.01 Aligned_cols=135 Identities=16% Similarity=0.132 Sum_probs=84.1
Q ss_pred CCCeEEEeCcCCcCCHHHHHHHHHHHHHhcCCeEEEEccCCCCCCcCcCCCCCCHHHHHHHHHHHHHhcC-CCceEEEee
Q 030486 20 SYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIK-PELVVQTEP 98 (176)
Q Consensus 20 ~~~~vv~~G~FDgvH~GH~~ll~~a~~~~~~~~~v~vt~~~~~~~k~~~~~l~~~~eR~~~l~~~~~~~~-~~~~v~~~~ 98 (176)
++++++++|+|||+|+||+.++++|++.+ +.+++++++++....+ ..+++.++|++|++.++.+.+ .+.++ +.
T Consensus 6 ~~~~~i~~G~FdP~H~GH~~li~~a~~~~-d~v~v~v~~~~~p~~~---~~~~~~~~R~~m~~~~~~~~~~~~~~~--i~ 79 (341)
T 2qjo_A 6 KYQYGIYIGRFQPFHLGHLRTLNLALEKA-EQVIIILGSHRVAADT---RNPWRSPERMAMIEACLSPQILKRVHF--LT 79 (341)
T ss_dssp SEEEEEEEECCTTCCHHHHHHHHHHHHHE-EEEEEEEEEETCCCCS---SSCSCHHHHHHHHHTTSCHHHHTTEEE--EE
T ss_pred eeeEEEEEEEeCCCCHHHHHHHHHHHHhC-CeEEEEECCcccCCCC---CCCCCHHHHHHHHHHHhhhccCCeEEE--EE
Confidence 45789999999999999999999999998 4566667765422222 234799999999998765541 11222 22
Q ss_pred ccCCC-CCccc---------c---CCccEEEEcCCcccChhhhhhhHHhCCCCceeEEEEeeeecCCCCCeeehHHHHHH
Q 030486 99 ITDPY-GPSIV---------D---ENLEAIVVSKETLPGGLSVNKKRADRGLSQLKIEVVDLVSEGSSGDKLSSSTLRKL 165 (176)
Q Consensus 99 l~~~~-~~~~~---------~---~~~~~ivvG~d~~fG~~~~~~~~~~~~~~~l~v~~v~~~~~~~~~~~ISST~IR~~ 165 (176)
..|.+ ....+ . ...+.+++|+|+..... .... ...+.+..++ ++..||||.||++
T Consensus 80 ~~d~~~~~~~w~~~~~~l~~~l~r~~~~~~~~g~~~~~~~~----~~~~--~~~~~~~~~~------~~~~iSST~IR~~ 147 (341)
T 2qjo_A 80 VRDWLYSDNLWLAAVQQQVLKITGGSNSVVVLGHRKDASSY----YLNL--FPQWDYLETG------HYPDFSSTAIRGA 147 (341)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHHTTCSCEEEEECCCSGGGG----GGGS--CTTSEEEECC------CCTTCCHHHHHHH
T ss_pred CCCCcCChHHHHHHHHHHhHHhcCCCceEEEEcCCCCCChH----HHHh--ccccceeecc------cCCCCCcHHHHHH
Confidence 33321 11100 0 01578889988742211 1111 1123333222 3678999999999
Q ss_pred HHhhccc
Q 030486 166 EAEKAKN 172 (176)
Q Consensus 166 i~~g~~~ 172 (176)
+.+|+..
T Consensus 148 l~~g~~~ 154 (341)
T 2qjo_A 148 YFEGKEG 154 (341)
T ss_dssp HHHTCGG
T ss_pred HHcCCCc
Confidence 9999754
No 25
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, cytidylyltra SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens}
Probab=99.67 E-value=5.5e-17 Score=134.92 Aligned_cols=130 Identities=18% Similarity=0.209 Sum_probs=87.9
Q ss_pred CCCeEEEeCcCCcCCHHHHHHHHHHHHHhcCCeEEEEccCCCCCCcCcCCCCCCHHHHHHHHHHHHHhcCCCceEEEeec
Q 030486 20 SYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTEPI 99 (176)
Q Consensus 20 ~~~~vv~~G~FDgvH~GH~~ll~~a~~~~~~~~~v~vt~~~~~~~k~~~~~l~~~~eR~~~l~~~~~~~~~~~~v~~~~l 99 (176)
++.++++.|+||++|.||+.+|++|++++ +.++|++++++.....+ ..+++|.+||.++++++ ..++ .+- .
T Consensus 6 ~~~~v~~~G~FD~lH~GH~~lL~~A~~l~-d~LiVgV~~d~~v~~~K-~~pi~s~eER~~~l~~l-~~VD---~Vv---~ 76 (341)
T 3elb_A 6 RAVRVWCDGCYDMVHYGHSNQLRQARAMG-DYLIVGVHTDEEIAKHK-GPPVFTQEERYKMVQAI-KWVD---EVV---P 76 (341)
T ss_dssp CCCEEEEEECCCSCCHHHHHHHHHHHHTS-SEEEEEECCHHHHHHHS-SCCSSCHHHHHHHHHHB-TTCC---EEE---E
T ss_pred CceEEEEEeeCCCCCHHHHHHHHHHHHhC-CcCEEEeecCHHHhccC-CCCCCCHHHHHHHHHHc-CCCC---EEE---e
Confidence 35689999999999999999999999998 46888999986432112 24789999999999874 2222 111 1
Q ss_pred cCCCCC---ccccCCccEEEEcCCcccChhhhhhhH--HhCCCCceeEEEEeeeecCCCCCeeehHHHHHHHHh
Q 030486 100 TDPYGP---SIVDENLEAIVVSKETLPGGLSVNKKR--ADRGLSQLKIEVVDLVSEGSSGDKLSSSTLRKLEAE 168 (176)
Q Consensus 100 ~~~~~~---~~~~~~~~~ivvG~d~~fG~~~~~~~~--~~~~~~~l~v~~v~~~~~~~~~~~ISST~IR~~i~~ 168 (176)
.+++.. .+...+++++|+|.||+||.+...... ++++ .+..++ . ...+|||.|.++|..
T Consensus 77 f~~~~~~~efi~~~~~d~vV~G~D~~~g~~~~~~~~~~k~~G----~~~~~~--~----t~g~STT~ii~ri~~ 140 (341)
T 3elb_A 77 AAPYVTTLETLDKYNCDFCVHGNDITLTVDGRDTYEEVKQAG----RYRECK--R----TQGVSTTDLVGRMLL 140 (341)
T ss_dssp TCCSSCCHHHHHHTTCSEEEECSCCCBCTTSCBTTHHHHHTT----CEEECC--C----CTTCCHHHHHHHHHC
T ss_pred cCCCCCHHHHHHHhCCCEEEECCCCCCCCCCcchHHHHHhCC----EEEEeC--C----CCCCCHHHHHHHHHH
Confidence 122111 123579999999999999954321111 1222 233333 2 457899999999865
No 26
>1yum_A 'probable nicotinate-nucleotide adenylyltransferase; alpha/beta domain; HET: CIT NCN; 1.70A {Pseudomonas aeruginosa} PDB: 1yul_A* 1yun_A*
Probab=99.67 E-value=1.3e-16 Score=127.17 Aligned_cols=70 Identities=24% Similarity=0.275 Sum_probs=54.0
Q ss_pred CCeEEEeCcCCcCCHHHHHHHHHHHHHhc-CCeEEEEccCCCCCCcCcCCCCCCHHHHHHHHHHHHHhcCCCceEE
Q 030486 21 YGAVVLGGTFDRLHDGHRLFLKASAELAR-DRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQ 95 (176)
Q Consensus 21 ~~~vv~~G~FDgvH~GH~~ll~~a~~~~~-~~~~v~vt~~~~~~~k~~~~~l~~~~eR~~~l~~~~~~~~~~~~v~ 95 (176)
.++++++|+|||+|+||+.++++|++.+. +.+++++++++.. |+ ..+++.++|++|++.+++..+ ...+.
T Consensus 23 ~~i~i~~GsFdPiH~GHl~li~~a~~~~~ld~v~v~~~~~~p~--K~--~~~~~~~~R~~ml~~a~~~~~-~v~v~ 93 (242)
T 1yum_A 23 KRIGLFGGTFDPVHIGHMRSAVEMAEQFALDELRLLPNARPPH--RE--TPQVSAAQRLAMVERAVAGVE-RLTVD 93 (242)
T ss_dssp CEEEEEEECCTTCCHHHHHHHHHHHHHHTCSEEEEEECCCCGG--GS--CTTCCHHHHHHHHHHHHTTCT-TEEEC
T ss_pred ceEEEEEeeCcHhhHHHHHHHHHHHHHcCCCEEEEEEcCCCCC--CC--CCCCCHHHHHHHHHHHhcCCC-eEEEe
Confidence 45789999999999999999999999874 3466777887532 32 347899999999999887753 33343
No 27
>1vlh_A Phosphopantetheine adenylyltransferase; TM0741, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: PNS; 2.20A {Thermotoga maritima} SCOP: c.26.1.3
Probab=99.65 E-value=2.7e-16 Score=119.36 Aligned_cols=135 Identities=19% Similarity=0.201 Sum_probs=82.5
Q ss_pred CCeEEEeCcCCcCCHHHHHHHHHHHHHhcCCeEEEEccCCCCCCcCcCCCCCCHHHHHHHHHHHHHhcCCCceEEEeecc
Q 030486 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTEPIT 100 (176)
Q Consensus 21 ~~~vv~~G~FDgvH~GH~~ll~~a~~~~~~~~~v~vt~~~~~~~k~~~~~l~~~~eR~~~l~~~~~~~~~~~~v~~~~l~ 100 (176)
..+++++|+|||+|.||+.++++|++.+ +.++++++.++ .+ +.+.+.++|++|++.+++..+ ...++ .++
T Consensus 12 ~~i~i~~GsFdP~H~GHl~l~~~A~~~~-D~viv~v~~~~---~k---k~~~~~~~R~~ml~~a~~~~~-~v~v~--~~e 81 (173)
T 1vlh_A 12 HMKAVYPGSFDPITLGHVDIIKRALSIF-DELVVLVTENP---RK---KCMFTLEERKKLIEEVLSDLD-GVKVD--VHH 81 (173)
T ss_dssp -CEEEEEECCTTCCHHHHHHHHHHHTTC-SEEEEEEECCT---TC---CCSSCHHHHHHHHHHHTTTCT-TEEEE--EEC
T ss_pred ceEEEEEEEECcCcHHHHHHHHHHHHHC-CEEEEEEeCCC---CC---CCCCCHHHHHHHHHHHhcCCC-CEEEe--cCc
Confidence 4689999999999999999999999998 57888888764 22 256899999999998887764 33333 222
Q ss_pred CCCCCccccCCccEEEEc----CCcccChhhhhhhHHhCCCCceeEEEEeeeecCCCCCeeehHHHHHHHHhhc
Q 030486 101 DPYGPSIVDENLEAIVVS----KETLPGGLSVNKKRADRGLSQLKIEVVDLVSEGSSGDKLSSSTLRKLEAEKA 170 (176)
Q Consensus 101 ~~~~~~~~~~~~~~ivvG----~d~~fG~~~~~~~~~~~~~~~l~v~~v~~~~~~~~~~~ISST~IR~~i~~g~ 170 (176)
+....++...+.++++.| .||..-. .+.-..+.+. ...+ .+-++..+ ....||||.||++++.|.
T Consensus 82 ~~tvd~l~~l~~~~~i~gl~~w~d~~~~~-~~~~~~r~~~-~~~~--~i~l~~~~-~~~~iSST~IR~~i~~g~ 150 (173)
T 1vlh_A 82 GLLVDYLKKHGIKVLVRGLRAVTDYEYEL-QMALANKKLY-SDLE--TVFLIASE-KFSFISSSLVKEVALYGG 150 (173)
T ss_dssp SCHHHHHHHHTCCEEEEEECTTSCHHHHH-HHHHHHHHHS-TTCE--EEEEECCG-GGTTCCHHHHHHHHHTTC
T ss_pred chHHHHHHHhCCCeEEeCCCcccchhhcc-chhhcCCCCC-CCCc--EEEEeCCC-CCCceeHHHHHHHHHcCC
Confidence 200011223467778877 3321111 1111222221 1112 22222210 123499999999999875
No 28
>1f9a_A Hypothetical protein MJ0541; alpha/beta, transferase, structural genomics; HET: ATP; 2.00A {Methanocaldococcus jannaschii} SCOP: c.26.1.3
Probab=99.63 E-value=3e-15 Score=112.77 Aligned_cols=62 Identities=24% Similarity=0.318 Sum_probs=49.4
Q ss_pred eEEEeCcCCcCCHHHHHHHHHHHHHhcCCeEEEE-ccCCCCCCcCcCCCCCCHHHHHHHHHHHHHhcC
Q 030486 23 AVVLGGTFDRLHDGHRLFLKASAELARDRIVVGV-CDGPMLTNKQFAELIQPVDERMRNVEAYIKSIK 89 (176)
Q Consensus 23 ~vv~~G~FDgvH~GH~~ll~~a~~~~~~~~~v~v-t~~~~~~~k~~~~~l~~~~eR~~~l~~~~~~~~ 89 (176)
+++++|+|||+|+||+.++++|++.+ +.+++++ ++++.. ++ ..+.+.++|.+|++.++++.+
T Consensus 2 i~i~~GsFdp~H~GH~~l~~~a~~~~-d~v~v~v~~~~~p~--~~--~~~~~~~~R~~m~~~~~~~~~ 64 (168)
T 1f9a_A 2 RGFIIGRFQPFHKGHLEVIKKIAEEV-DEIIIGIGSAQKSH--TL--ENPFTAGERILMITQSLKDYD 64 (168)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHTTTC-SEEEEEECSTTCCS--SS--SCCSCHHHHHHHHHHHHTTSS
T ss_pred EEEEEEecCCcCHHHHHHHHHHHHhC-CeEEEEEcCCCCCC--CC--CCCCCHHHHHHHHHHHHhcCC
Confidence 68999999999999999999999987 4566666 666522 22 234699999999999988764
No 29
>2ejc_A Pantoate--beta-alanine ligase; X-RAY diffraction, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Thermotoga maritima}
Probab=99.60 E-value=4.2e-16 Score=126.20 Aligned_cols=138 Identities=14% Similarity=0.171 Sum_probs=83.7
Q ss_pred CeEEEeCcCCcCCHHHHHHHHHHHHHhcCCeEEEEccCC--CCCCcCcCCCCCCHHHHHHHHHHH---------HHhcCC
Q 030486 22 GAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGP--MLTNKQFAELIQPVDERMRNVEAY---------IKSIKP 90 (176)
Q Consensus 22 ~~vv~~G~FDgvH~GH~~ll~~a~~~~~~~~~v~vt~~~--~~~~k~~~~~l~~~~eR~~~l~~~---------~~~~~~ 90 (176)
++++++|+||++|.||+.||++|++.++ .+++.+..+| +.++...+..+.++++|.++++++ +.++.|
T Consensus 22 ~~V~~vgtfdgLH~GH~sLI~~A~~~ad-~vVVSffvnP~qf~~~ed~~~yp~tle~d~~lL~~~GVD~vf~p~~~~m~p 100 (280)
T 2ejc_A 22 KTIGFVPTMGYLHEGHLSLVRRARAEND-VVVVSIFVNPTQFGPNEDYERYPRDFERDRKLLEKENVDCIFHPSVEEMYP 100 (280)
T ss_dssp CCEEEEEECSCCCHHHHHHHHHHHHHSS-EEEEEECCCGGGCCTTSCGGGSCCCHHHHHHHHHTTTCSEEECCCHHHHSC
T ss_pred CEEEEEcCCccccHHHHHHHHHHHHhCC-EEEEEEeCChHHhcCCcccccCCCCHHHHHHHHHHCCCCEEEeCCHHHCCC
Confidence 4678889999999999999999999984 3333332233 333332334568899999999876 344556
Q ss_pred CceEEEeeccCCCCCcc-ccCCccE------------EEEcC-CcccChhhhhhhHHh------CCCCceeEEEEeeeec
Q 030486 91 ELVVQTEPITDPYGPSI-VDENLEA------------IVVSK-ETLPGGLSVNKKRAD------RGLSQLKIEVVDLVSE 150 (176)
Q Consensus 91 ~~~v~~~~l~~~~~~~~-~~~~~~~------------ivvG~-d~~fG~~~~~~~~~~------~~~~~l~v~~v~~~~~ 150 (176)
+.|+..+.. .....-+ ....+.+ .+||+ |++||.++..+.... .++ ++.++.+|.+..
T Consensus 101 ~~f~~~v~~-~~~~~~l~G~~rp~hF~Gv~tvv~kLf~iv~p~~~~FG~kd~qq~~~l~~~~~dl~~-~v~iv~vp~vr~ 178 (280)
T 2ejc_A 101 PDFSTYVEE-TKLSKHLCGRSRPGHFRGVCTVVTKLFNIVKPHRAYFGQKDAQQFRVLRRMVRDLNM-DVEMIECPIVRE 178 (280)
T ss_dssp TTCCCCCCC-CSGGGTTTGGGSTTHHHHHHHHHHHHHHHHCCSEEEEEGGGHHHHHHHHHHHHHTTC-CCEEEEECCCBC
T ss_pred cCceEEEEc-CCcceEEecCCCCCeecceEEEEeeeceeccCceEEeCCCCCcCHHHHHHHHHHcCC-eEEEEeeCcEEc
Confidence 655432111 0000000 0123444 56666 899997765443222 222 234455787753
Q ss_pred CCCCCeeehHHHH
Q 030486 151 GSSGDKLSSSTLR 163 (176)
Q Consensus 151 ~~~~~~ISST~IR 163 (176)
.+|..+|||.++
T Consensus 179 -~dGlaiSSrn~y 190 (280)
T 2ejc_A 179 -PDGLAMSSRNVY 190 (280)
T ss_dssp -TTSCBCCGGGGG
T ss_pred -CCCCEeccCccc
Confidence 378999999764
No 30
>1nup_A FKSG76; NAD biosynthesis, mitochondria, pyridine adenylyltransferase catalysis, transferase; HET: NMN; 1.90A {Homo sapiens} SCOP: c.26.1.3 PDB: 1nuq_A* 1nur_A 1nus_A* 1nut_A* 1nuu_A*
Probab=99.59 E-value=3.8e-15 Score=119.25 Aligned_cols=77 Identities=9% Similarity=0.080 Sum_probs=53.0
Q ss_pred CCeEEEeCcCCcCCHHHHHHHHHHHHHhcCC---eEEEEccCCCCCCcCcCCCCCCHHHHHHHHHHHHHhcCCCceEEEe
Q 030486 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDR---IVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTE 97 (176)
Q Consensus 21 ~~~vv~~G~FDgvH~GH~~ll~~a~~~~~~~---~~v~vt~~~~~~~k~~~~~l~~~~eR~~~l~~~~~~~~~~~~v~~~ 97 (176)
..+++++|+|||+|+||+.++++|++.++.. .+|++++.+...+.. ...+++.++|++|++.+++..+ ...++.+
T Consensus 6 ~~i~i~~GsFdPiH~GHl~l~~~a~~~~~~~~~~~vv~~~~~p~~~~~~-k~~~~~~~~R~~m~~~ai~~~~-~~~v~~~ 83 (252)
T 1nup_A 6 PVVLLACGSFNPITNMHLRMFEVARDHLHQTGMYQVIQGIISPVNDTYG-KKDLAASHHRVAMARLALQTSD-WIRVDPW 83 (252)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHHHHTTSEEEEEEEEEECCTTCS-SSCCCCHHHHHHHHHHHGGGCS-SEEECCH
T ss_pred ceEEEEEecCcHhhHHHHHHHHHHHHHhcccCCceEEEEEEeCCCCccc-CCCCCCHHHHHHHHHHHhcCCC-ceEeehH
Confidence 3578999999999999999999999987542 343344433211111 1247899999999999988753 3444433
Q ss_pred ec
Q 030486 98 PI 99 (176)
Q Consensus 98 ~l 99 (176)
++
T Consensus 84 E~ 85 (252)
T 1nup_A 84 ES 85 (252)
T ss_dssp HH
T ss_pred Hh
Confidence 33
No 31
>1kqn_A Nmnat, nicotinamide mononucleotide adenylyl transferase; nucleotidyltransferase superfamily; HET: NAD; 2.20A {Homo sapiens} SCOP: c.26.1.3 PDB: 1kqo_A* 1kr2_A* 1kku_A 1gzu_A*
Probab=99.57 E-value=2.7e-15 Score=121.80 Aligned_cols=66 Identities=18% Similarity=0.189 Sum_probs=48.0
Q ss_pred CCeEEEeCcCCcCCHHHHHHHHHHHHHhcC-C--eEEEEccCCC--CCCcCcCCCCCCHHHHHHHHHHHHHhcC
Q 030486 21 YGAVVLGGTFDRLHDGHRLFLKASAELARD-R--IVVGVCDGPM--LTNKQFAELIQPVDERMRNVEAYIKSIK 89 (176)
Q Consensus 21 ~~~vv~~G~FDgvH~GH~~ll~~a~~~~~~-~--~~v~vt~~~~--~~~k~~~~~l~~~~eR~~~l~~~~~~~~ 89 (176)
..+++++|+|||+|+||+.+++.|++.++. . .+++++|.+. ...| ..+++.++|++|++.++...+
T Consensus 8 ~~i~i~gGsFDPiH~GHl~l~~~a~~~~~~d~~~~vvv~~f~P~~~~~~K---~~l~s~~~R~~ml~~ai~~~~ 78 (279)
T 1kqn_A 8 EVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKK---KGLIPAYHRVIMAELATKNSK 78 (279)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHHHHTSSEEEEEEEEEECCGGGCC---TTCCCHHHHHHHHHHHTTTCS
T ss_pred ceEEEEEeeecHhhHHHHHHHHHHHHHhcccCCceEEEEEEcCCCCCccc---cCCCCHHHHHHHHHHHhcCCC
Confidence 467899999999999999999999998753 2 1333233221 1122 347899999999999877653
No 32
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1
Probab=99.48 E-value=7.2e-14 Score=116.74 Aligned_cols=66 Identities=23% Similarity=0.330 Sum_probs=51.6
Q ss_pred CeEEEeCcCCcCCHHHHHHHHHHHHHhcCCeEEEEccCCCC-----CCcCcCCCCCCHHHHHHHHHHHHHhcC
Q 030486 22 GAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPML-----TNKQFAELIQPVDERMRNVEAYIKSIK 89 (176)
Q Consensus 22 ~~vv~~G~FDgvH~GH~~ll~~a~~~~~~~~~v~vt~~~~~-----~~k~~~~~l~~~~eR~~~l~~~~~~~~ 89 (176)
++++++|+|||+|+||+.++++|.+.+ +.++|+++.++.. +..+ .+...|.++|++|++.++...+
T Consensus 3 ~~~i~~GtFdP~h~GHl~~~~~a~~~~-d~v~v~~~~~~~~~~~~~~~~~-~~~~~~~~~R~~m~~~~~~~~~ 73 (365)
T 1lw7_A 3 KVGVIFGKFYPVHTGHINMIYEAFSKV-DELHVIVCSDTVRDLKLFYDSK-MKRMPTVQDRLRWMQQIFKYQK 73 (365)
T ss_dssp CEEEEEECCSSCCHHHHHHHHHHHTTC-SEEEEEEEECHHHHHHHHHHTT-CSSCCCHHHHHHHHHHHTSTTT
T ss_pred cEEEEEEeeCCCCHHHHHHHHHHHHHC-CEEEEEECCCCccccccccccc-cCCCCCHHHHHHHHHHHhhcCC
Confidence 579999999999999999999999987 5788888877531 1110 0224899999999999887653
No 33
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.48 E-value=8.4e-14 Score=115.32 Aligned_cols=65 Identities=15% Similarity=0.257 Sum_probs=51.5
Q ss_pred CCCeEEEeCcCCcCCHHHHHHHHHHHHHhcCCeEEEEccCCCCCCcCcCCCCCCHHHHHHHHHHHHHhc
Q 030486 20 SYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSI 88 (176)
Q Consensus 20 ~~~~vv~~G~FDgvH~GH~~ll~~a~~~~~~~~~v~vt~~~~~~~k~~~~~l~~~~eR~~~l~~~~~~~ 88 (176)
++++++++|+|||+|+||+.++++|++.++ .++++++.++....+ ...+|.++|++|++.++++.
T Consensus 6 ~~~~~i~~GtFdP~h~GHl~~~~~a~~~~d-~~~~~v~~~~~~~~~---~~~~~~~~R~~m~~~~~~~~ 70 (352)
T 2qjt_B 6 MYDISVFIGRFQPFHKGHLHNIIIALQNSK-KVIINIGSCFNTPNI---KNPFSFEQRKQMIESDLQVA 70 (352)
T ss_dssp CEEEEEEEECCTTCCHHHHHHHHHHHHSEE-EEEEEEEEESCCCCS---SSCSCHHHHHHHHHHHHHHT
T ss_pred cccEEEEEEecCCCChHHHHHHHHHHHhCC-cEEEEECCCCCCccc---CCCCCHHHHHHHHHHHhccc
Confidence 457899999999999999999999999874 667777665432222 23579999999999998765
No 34
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, cytidylyltra SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens}
Probab=99.43 E-value=1.3e-13 Score=114.60 Aligned_cols=133 Identities=22% Similarity=0.296 Sum_probs=86.4
Q ss_pred CCeEEEeCcCCcCCHHHHHHHHHHHHHhcC-CeEEEEccCCCCC-CcCcCCCCCCHHHHHHHHHHHHHhcCCCceEEEee
Q 030486 21 YGAVVLGGTFDRLHDGHRLFLKASAELARD-RIVVGVCDGPMLT-NKQFAELIQPVDERMRNVEAYIKSIKPELVVQTEP 98 (176)
Q Consensus 21 ~~~vv~~G~FDgvH~GH~~ll~~a~~~~~~-~~~v~vt~~~~~~-~k~~~~~l~~~~eR~~~l~~~~~~~~~~~~v~~~~ 98 (176)
.++|++.|+||++|.||+.+|++|+++++. .++|++..|+... .|....++++.+||.++++++ ..++ .+.
T Consensus 198 ~~iv~~~GsFD~~h~GHl~~L~rA~~l~D~~~LiVgV~~d~~v~~~Kg~~~pi~~~~ER~~~v~~~-~~vd---~V~--- 270 (341)
T 3elb_A 198 ETVIYVAGAFDLFHIGHVDFLEKVHRLAERPYIIAGLHFDQEVNHYKGKNYPIMNLHERTLSVLAC-RYVS---EVV--- 270 (341)
T ss_dssp CEEEEEEECCTTCCHHHHHHHHHHHTTSSSEEEEEEEECHHHHHHHHCTTCCSSCHHHHHHHHHTB-TTCC---EEE---
T ss_pred CEEEEEecccCCCCHHHHHHHHHHHHhCCCCEEEEEEccCHhhHhhcCCCCCCCCHHHHHHHHHHc-CCCC---CEE---
Confidence 457999999999999999999999999832 6889998875332 232225789999999999864 3332 222
Q ss_pred ccCCCCCc---cccCCccEEEEcCCcccChh---hhhhhHHhCCCCceeEEEEeeeecCCCCCeeehHHHHHHHHhhc
Q 030486 99 ITDPYGPS---IVDENLEAIVVSKETLPGGL---SVNKKRADRGLSQLKIEVVDLVSEGSSGDKLSSSTLRKLEAEKA 170 (176)
Q Consensus 99 l~~~~~~~---~~~~~~~~ivvG~d~~fG~~---~~~~~~~~~~~~~l~v~~v~~~~~~~~~~~ISST~IR~~i~~g~ 170 (176)
+..+++.+ +...+++.+|-|.|+..-.. ..-...+.++. +..++ ....+|+|.|-++|...+
T Consensus 271 v~~~~~l~~~~~~~~~~~~iv~G~d~~~~~~~g~d~y~~~k~~G~----~~~i~------~~~~~STt~ii~RI~~nr 338 (341)
T 3elb_A 271 IGAPYAVTAELLSHFKVDLVCHGKTEIIPDRDGSDPYQEPKRRGI----FRQID------SGSNLTTDLIVQRIITNR 338 (341)
T ss_dssp EEECSSCCHHHHHHTTCSEEEECSSCCCCCTTSCCTTHHHHHHTC----EEECC------CSCCCCHHHHHHHHHC--
T ss_pred ECCCCcchHHHHHhcCCcEEEECCCCccccCCccchHHHHHhCCE----EEEcC------CCCCCCHHHHHHHHHHHH
Confidence 22333322 23569999999998764311 10011222222 23333 246789999999997654
No 35
>1v8f_A Pantoate-beta-alanine ligase; rossmann fold, dimer, structural genomics, riken STR genomics/proteomics initiative, RSGI; HET: P6G; 1.90A {Thermus thermophilus} SCOP: c.26.1.4 PDB: 1ufv_A
Probab=99.40 E-value=9.7e-14 Score=112.04 Aligned_cols=127 Identities=19% Similarity=0.228 Sum_probs=83.1
Q ss_pred CeEEEeCcCCcCCHHHHHHHHHHHHHhcCCeEEEEccCC--CCCCcCcCCCCCCHHHHHHHHHHH---------HHhcCC
Q 030486 22 GAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGP--MLTNKQFAELIQPVDERMRNVEAY---------IKSIKP 90 (176)
Q Consensus 22 ~~vv~~G~FDgvH~GH~~ll~~a~~~~~~~~~v~vt~~~--~~~~k~~~~~l~~~~eR~~~l~~~---------~~~~~~ 90 (176)
..|.++|+ +|.||+.|+++|++.+ +.+++.+..+| +..+...+..+.++++|.++++++ +.++.|
T Consensus 20 ~~VpTmG~---lH~GH~~Li~~A~~~a-~~vVvsff~nP~qf~~~ed~~~yp~tle~d~~ll~~~GvD~vf~p~f~~m~p 95 (276)
T 1v8f_A 20 GFVPTMGY---LHRGHLALVERARREN-PFVVVSVFVNPLQFGPGEDYHRYPRDLERDRALLQEAGVDLLFAPGVEEMYP 95 (276)
T ss_dssp EEEEECSS---CCHHHHHHHHHHHHHC-SEEEEEECCCGGGCCTTSSTTTSCCCHHHHHHHHHHTTCSEEECCCHHHHSC
T ss_pred eEEEeCCC---ccHHHHHHHHHHHHhC-CEEEEEEECCHHHhCCCcccCCCCcCHHHHHHHHHhCCCCEEEeCChHhCCC
Confidence 56789999 9999999999999987 33443333333 333333345689999999999886 355666
Q ss_pred CceEEEeeccCCCCCccccCCccEEEEcC----------------------C-cccChhhhhhhHHh------CCCCcee
Q 030486 91 ELVVQTEPITDPYGPSIVDENLEAIVVSK----------------------E-TLPGGLSVNKKRAD------RGLSQLK 141 (176)
Q Consensus 91 ~~~v~~~~l~~~~~~~~~~~~~~~ivvG~----------------------d-~~fG~~~~~~~~~~------~~~~~l~ 141 (176)
+.|+..+.. ..+++.+++|. | |+||.+...+.... .++ ++.
T Consensus 96 ~~f~~~v~~---------~~~~~~vl~G~~RpghF~GV~TVv~kLf~iv~Pd~~~FG~kd~qq~~~l~~~~~dl~~-~v~ 165 (276)
T 1v8f_A 96 EGFATRVQV---------EGPLTALWEGAVRPGHFQGVATVVARLFLLVQPQRAYFGEKDYQQLLVVRRMVRDLGF-PVE 165 (276)
T ss_dssp TTCCEEEEE---------CSHHHHSTHHHHSTTHHHHHHHHHHHHHHHHCCSEEEEEGGGHHHHHHHHHHHHHHTC-CCE
T ss_pred cCCeEEEEe---------cCCcceEEecCCCCCeecceeehhhHhhcccCCCEEEECCCCCcCHHHHHHHHHHcCC-eEE
Confidence 666543221 12455565665 9 99997754433222 222 234
Q ss_pred EEEEeeeecCCCCCeeehHHHH
Q 030486 142 IEVVDLVSEGSSGDKLSSSTLR 163 (176)
Q Consensus 142 v~~v~~~~~~~~~~~ISST~IR 163 (176)
++.+|.+.. .+|..+|||+||
T Consensus 166 iv~~p~vr~-~dGlaiSSrnir 186 (276)
T 1v8f_A 166 VVGVPTVRE-EDGLALSSRNVY 186 (276)
T ss_dssp EEEECCCBC-TTSCBCCGGGGG
T ss_pred EEecCcEEc-CCCCEeEEeEEE
Confidence 444487764 378999999997
No 36
>3gmi_A UPF0348 protein MJ0951; protein with unknown function, structural genomics, PSI, MCS protein structure initiative; 1.91A {Methanocaldococcus jannaschii}
Probab=99.40 E-value=5.8e-13 Score=111.23 Aligned_cols=88 Identities=11% Similarity=-0.043 Sum_probs=59.4
Q ss_pred CCeEEEeCcCCcCCHHHHHHHHHHHHHhcCCeEEEEccCCC-CCCcCcCCCCCCHHHHHHHHHHHH----------HhcC
Q 030486 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPM-LTNKQFAELIQPVDERMRNVEAYI----------KSIK 89 (176)
Q Consensus 21 ~~~vv~~G~FDgvH~GH~~ll~~a~~~~~~~~~v~vt~~~~-~~~k~~~~~l~~~~eR~~~l~~~~----------~~~~ 89 (176)
.++++++|+|||+|+|||.+|++|++ .+..++++|.+.. +. +....++|.++|.++++.+. ..++
T Consensus 52 ~~~v~~lG~FDg~H~GHq~lI~~a~~--~~~~~~Vms~~~~~vq--rg~~~l~~~~~R~~~~~~~GvD~vielpF~~~~s 127 (357)
T 3gmi_A 52 DKIVCDFTEYNPLHKGHKYALEKGKE--HGIFISVLPGPLERSG--RGIPYFLNRYIRAEMAIRAGADIVVEGPPMGIMG 127 (357)
T ss_dssp CCEEEEECCCTTCCHHHHHHHHHHHT--SSEEEEEECCTTSBCT--TSSBCSSCHHHHHHHHHHHTCSEEEECCCGGGSC
T ss_pred CCEEEEEEecCccCHHHHHHHHHHHH--cCCeEEEEcCchHHhc--CCCCcCCCHHHHHHHHHHCCCCEEEEcCchhhCC
Confidence 36899999999999999999999998 3335566675431 32 12346899999999999872 1233
Q ss_pred CCceEEEe-eccCCCCCccccCCccEEEEcC
Q 030486 90 PELVVQTE-PITDPYGPSIVDENLEAIVVSK 119 (176)
Q Consensus 90 ~~~~v~~~-~l~~~~~~~~~~~~~~~ivvG~ 119 (176)
|++|++.. .+ +..+++++||+|+
T Consensus 128 ~~~Fv~~~v~l-------l~~l~~~~iv~G~ 151 (357)
T 3gmi_A 128 SGQYMRCLIKM-------FYSLGAEIIPRGY 151 (357)
T ss_dssp HHHHHHHHHHH-------HHHHTCCEEEEEE
T ss_pred HHHHHHHHHHH-------HHHcCCCEEEECC
Confidence 33333210 01 1235899999998
No 37
>3ag6_A Pantothenate synthetase; ATP-dependent enzyme, ATP-binding, nucleotide-binding, pantothenate biosynthesis; HET: PAJ PG4; 1.85A {Staphylococcus aureus} PDB: 3ag5_A* 2x3f_A*
Probab=99.31 E-value=9.5e-13 Score=106.54 Aligned_cols=132 Identities=19% Similarity=0.242 Sum_probs=85.2
Q ss_pred EEEeCcCCcCCHHHHHHHHHHHHHhcCCeEEEEccC--C--CCCCcCcCCCCCCHHHHHHHHHHH---------HHhcCC
Q 030486 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDG--P--MLTNKQFAELIQPVDERMRNVEAY---------IKSIKP 90 (176)
Q Consensus 24 vv~~G~FDgvH~GH~~ll~~a~~~~~~~~~v~vt~~--~--~~~~k~~~~~l~~~~eR~~~l~~~---------~~~~~~ 90 (176)
|.++|+ +|.||+.|+++|++.++ .+++|+. | +.++...+..+.+++++.++++++ ++++.|
T Consensus 28 VpTmG~---lH~GH~~LI~~a~~~a~---~vVvsffvnP~qf~~~ed~~~yprtle~d~~ll~~~GvD~vf~p~~~~myp 101 (283)
T 3ag6_A 28 IPTMGA---LHDGHLTMVRESVSTND---ITIVSVFVNPLQFGPNEDFDAYPRQIDKDLELVSEVGADIVFHPAVEDMYP 101 (283)
T ss_dssp EEECSS---CCHHHHHHHHHHHTTSS---EEEEEECCCGGGCCTTSSTTTSCCCHHHHHHHHHHHTCSEEECCCHHHHSC
T ss_pred EECCcc---ccHHHHHHHHHHHHhCC---EEEEEEeCChhhcCCccccccCCCCHHHHHHHHHhCCCCEEEeCCHHHCCC
Confidence 558997 99999999999998874 3445554 2 333333345678999999999987 456677
Q ss_pred CceEEEeeccCCCCCccc-cCCcc-------------EEEEcCCcccChhhhhhhHHhCCC---C--ceeEEEEeeeecC
Q 030486 91 ELVVQTEPITDPYGPSIV-DENLE-------------AIVVSKETLPGGLSVNKKRADRGL---S--QLKIEVVDLVSEG 151 (176)
Q Consensus 91 ~~~v~~~~l~~~~~~~~~-~~~~~-------------~ivvG~d~~fG~~~~~~~~~~~~~---~--~l~v~~v~~~~~~ 151 (176)
+.|+..+.. .....-+. ..++. .+|.|+|++||.++..+......+ - ++.++.+|.+..
T Consensus 102 ~~f~~~v~~-~~l~~~L~G~~rp~hF~GV~TVV~KLf~iV~p~~~~FG~Kd~qql~~l~~m~~dl~~~V~iv~vp~vr~- 179 (283)
T 3ag6_A 102 GELGIDVKV-GPLADVLEGAKRPGHFDGVVTVVNKLFNIVMPDYAYFGKKDAQQLAIVEQMVKDFNHAVEIIGIDIVRE- 179 (283)
T ss_dssp SSCSEEEEE-CGGGSSTHHHHSTTHHHHHHHHHHHHHHHHCCSEEEEEGGGHHHHHHHHHHHHHTTCCCEEEEECCCBC-
T ss_pred CCceEEEec-cccchhhccCCCCCeecchhhHhhhhcEEecCceEEECCCCccCHHHHHHHHHHcCCeEEEEecCcEEe-
Confidence 777553322 11100011 14667 788999999997765443222211 1 234455787764
Q ss_pred CCCCeeehHHHH
Q 030486 152 SSGDKLSSSTLR 163 (176)
Q Consensus 152 ~~~~~ISST~IR 163 (176)
.+|..+|||.++
T Consensus 180 ~dGlaiSSrn~y 191 (283)
T 3ag6_A 180 ADGLAKSSRNVY 191 (283)
T ss_dssp TTSCBCCGGGGG
T ss_pred CCCCEecCCccc
Confidence 378999999864
No 38
>1jhd_A Sulfate adenylyltransferase; sulfurylase, APS, chemoautotroph, bromide; 1.70A {Sulfur-oxidizing endosymbiont ofriftia pachyptila} SCOP: b.122.1.3 c.26.1.5
Probab=99.10 E-value=1.1e-09 Score=92.59 Aligned_cols=94 Identities=17% Similarity=0.179 Sum_probs=64.9
Q ss_pred CeEEEeCcCCcCCHHHHHHHHHHHHHhcC-CeEEEEccCCCCCCcCcCCCCCCHHHHHHHHHHHHHhc-CCC-ceEEEee
Q 030486 22 GAVVLGGTFDRLHDGHRLFLKASAELARD-RIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSI-KPE-LVVQTEP 98 (176)
Q Consensus 22 ~~vv~~G~FDgvH~GH~~ll~~a~~~~~~-~~~v~vt~~~~~~~k~~~~~l~~~~eR~~~l~~~~~~~-~~~-~~v~~~~ 98 (176)
++|+++|+|||+|+||..|++.|++.+.. .+++..+..+ .| ....+.+.|+++++.+++.+ +++ ..+...+
T Consensus 193 ~~VvafqTrNPiHrgH~~l~~~Ale~~~~D~vll~P~~g~---~K---~~di~~~~R~~~~~~~~~~~~p~~~v~l~~~p 266 (396)
T 1jhd_A 193 SKVVAFQTRNPMHRAHEELCRMAMESLDADGVVVHMLLGK---LK---KGDIPAPVRDAAIRTMAEVYFPPNTVMVTGYG 266 (396)
T ss_dssp SSEEEEEESSCCCHHHHHHHHHHHHHHTCSEEEEEEEECC---CC---TTCCCHHHHHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred ceEEEeccCCCCchHHHHHHHHHHHHcCCCeEEEEECCCC---CC---CCCCCHHHHHHHHHHHHHhcCCCcceEEEech
Confidence 57889999999999999999999998753 3444444433 22 22368999999999999984 443 2344344
Q ss_pred ccCC-CCCccc--------cCCccEEEEcCCc
Q 030486 99 ITDP-YGPSIV--------DENLEAIVVSKET 121 (176)
Q Consensus 99 l~~~-~~~~~~--------~~~~~~ivvG~d~ 121 (176)
+.-. -||+.+ ..++.++++|.|.
T Consensus 267 ~~m~~aGPreailhaiirkn~G~t~fIVGrDh 298 (396)
T 1jhd_A 267 FDMLYAGPREAVLHAYFRQNMGATHFIIGRDH 298 (396)
T ss_dssp CCCCCCTHHHHHHHHHHHHHTTCSEEEECTTT
T ss_pred HHhhcCCchHHHHHHHHHHcCCCcEEEECCCC
Confidence 4322 355432 2477899999886
No 39
>3cov_A Pantothenate synthetase; pantothenate biosynthesis, enzym ligase, drug design, ATP-binding, magnesium, metal-binding; 1.50A {Mycobacterium tuberculosis} SCOP: c.26.1.4 PDB: 3cow_A* 3coy_A* 3coz_A* 3imc_A* 3ime_A* 3img_A* 3iob_A* 3ioc_A* 3iod_A* 3ioe_A* 3iub_A* 3iue_A* 3ivc_A* 3ivg_A* 3ivx_A* 2a84_A* 1n2b_A* 1n2e_A* 1n2g_A* 1n2h_A* ...
Probab=99.10 E-value=2.3e-11 Score=99.19 Aligned_cols=128 Identities=21% Similarity=0.187 Sum_probs=79.7
Q ss_pred CeEEEeCcCCcCCHHHHHHHHHHHH-HhcCCeEEEEccC--C--CCCCcCcCCCCCCHHHHHHHHHHH---------HHh
Q 030486 22 GAVVLGGTFDRLHDGHRLFLKASAE-LARDRIVVGVCDG--P--MLTNKQFAELIQPVDERMRNVEAY---------IKS 87 (176)
Q Consensus 22 ~~vv~~G~FDgvH~GH~~ll~~a~~-~~~~~~~v~vt~~--~--~~~~k~~~~~l~~~~eR~~~l~~~---------~~~ 87 (176)
+++.+..|+..+|.||+.|+++|++ .++ ++++|+. | +.++...+..+.+++++.++++++ +.+
T Consensus 33 ~~vg~VpTmG~LH~GH~sLI~~A~~~~a~---~vVvSffvnP~qF~~~ed~~~yprtle~d~~lL~~~GVD~vf~p~~~~ 109 (301)
T 3cov_A 33 RRVMLVPTMGALHEGHLALVRAAKRVPGS---VVVVSIFVNPMQFGAGGDLDAYPRTPDDDLAQLRAEGVEIAFTPTTAA 109 (301)
T ss_dssp CEEEEEEECSCCCHHHHHHHHHHHTSTTE---EEEEEECCCGGGCCSSSHHHHSCCCHHHHHHHHHHTTCCEEECCCHHH
T ss_pred CcEEEEecCCcccHHHHHHHHHHHHhcCC---EEEEEEcCChhhcCCccccccCCCCHHHHHHHHHhCCCCEEEeCCHHH
Confidence 3455556666699999999999998 772 3344543 3 333332234578999999999886 345
Q ss_pred cCCCceEEEeeccCCCCCccccCCccEEEEcC-----------------------CcccChhhhhhhHHhCCC---C--c
Q 030486 88 IKPELVVQTEPITDPYGPSIVDENLEAIVVSK-----------------------ETLPGGLSVNKKRADRGL---S--Q 139 (176)
Q Consensus 88 ~~~~~~v~~~~l~~~~~~~~~~~~~~~ivvG~-----------------------d~~fG~~~~~~~~~~~~~---~--~ 139 (176)
+.|+.|+..+.. .++..+++|. |++||.+...+......+ - +
T Consensus 110 myP~~f~~~v~~----------~~~~~vl~G~~RPghF~GV~TVV~KLfniv~P~~a~FG~Kd~qql~~lr~mv~dl~~~ 179 (301)
T 3cov_A 110 MYPDGLRTTVQP----------GPLAAELEGGPRPTHFAGVLTVVLKLLQIVRPDRVFFGEKDYQQLVLIRQLVADFNLD 179 (301)
T ss_dssp HCTTCSCSEEEC----------CGGGGSGGGSSCTTHHHHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHHHTTCC
T ss_pred CCCCCceEEEec----------CCcceeeecCCCCChhhhhhHHHHHHhhccCCCeEEECCCcccCHHHHHHHHHHcCCe
Confidence 556655432211 1456666676 999997654443222111 1 3
Q ss_pred eeEEEEeeeecCCCCCeeehHHHH
Q 030486 140 LKIEVVDLVSEGSSGDKLSSSTLR 163 (176)
Q Consensus 140 l~v~~v~~~~~~~~~~~ISST~IR 163 (176)
++++.+|.+.. .+|..+|||..+
T Consensus 180 V~iv~vp~vRe-~dGlaiSSrN~y 202 (301)
T 3cov_A 180 VAVVGVPTVRE-ADGLAMSSRNRY 202 (301)
T ss_dssp CEEEEECCCBC-TTSCBCCTTGGG
T ss_pred EEEEeeCcEEe-CCCCEEEecccC
Confidence 34555787774 378999998653
No 40
>1v47_A ATP sulfurylase; product binding complex, zinc, riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; HET: ADX; 2.49A {Thermus thermophilus} SCOP: b.122.1.3 c.26.1.5
Probab=99.03 E-value=2.6e-09 Score=89.03 Aligned_cols=140 Identities=21% Similarity=0.209 Sum_probs=83.9
Q ss_pred CeEEEeCcCCcCCHHHHHHHHHHHHHhcCCeEEEEccCCCCCCcCcCCCCCCHHHHHHHHHHHHHhc-CCCc-eEEEeec
Q 030486 22 GAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSI-KPEL-VVQTEPI 99 (176)
Q Consensus 22 ~~vv~~G~FDgvH~GH~~ll~~a~~~~~~~~~v~vt~~~~~~~k~~~~~l~~~~eR~~~l~~~~~~~-~~~~-~v~~~~l 99 (176)
+.|++.|+|||+|+||..|.++|++.+ +.+++..+..+ .| ....+.+.|++|++.+++.. +++. .+....+
T Consensus 156 ~~VvafqTrNPiHrgH~~l~~~ale~~-d~vll~P~~g~---~K---~~d~~~~~R~~~~~~~i~~~~p~~~~~l~~~p~ 228 (349)
T 1v47_A 156 RKVVAFQTRNAPHRAHEYLIRLGLELA-DGVLVHPILGA---KK---PDDFPTEVIVEAYQALIRDFLPQERVAFFGLAT 228 (349)
T ss_dssp CSEEEEEESSCCCHHHHHHHHHHHHHS-SEEEEEEBCSC---CC---TTSCCHHHHHHHHHHHHHHHSCGGGEEECCBCS
T ss_pred CeEEEeecCCCCchHHHHHHHHHHHhC-CcEEEEECCCC---CC---CCCCCHHHHHHHHHHHHhhcCCCcceEEEechH
Confidence 578889999999999999999999974 34444344333 12 22378999999999999886 5431 2222222
Q ss_pred cCC-CCCccc--------cCCccEEEEcCCcc-----cChhhhhhhHHhCCCCceeEEEEee--e----------ec---
Q 030486 100 TDP-YGPSIV--------DENLEAIVVSKETL-----PGGLSVNKKRADRGLSQLKIEVVDL--V----------SE--- 150 (176)
Q Consensus 100 ~~~-~~~~~~--------~~~~~~ivvG~d~~-----fG~~~~~~~~~~~~~~~l~v~~v~~--~----------~~--- 150 (176)
.-. -||+.+ ..++.++++|.|.. .|.....++-... +++++..+.. . ..
T Consensus 229 ~m~~aGPreailhaiirkn~G~t~fIVGrDhag~~~~y~~~~aq~i~~~~--~~l~i~~v~~~~~~Y~~~~~~~~~~~~~ 306 (349)
T 1v47_A 229 PMRYAGPKEAVFHALVRKNFGATHFLVGRDHAGVGDFYDPYAAHRIFDRL--PPLGIEIVKVGAVFHCPLCGGIASERTC 306 (349)
T ss_dssp CCCCCTHHHHHHHHHHHHHTTCSEEEECTTTTCSTTCSCTTHHHHGGGGS--CCCSSEEEECCCEEEETTTTEEEETTTS
T ss_pred HhhcCCcHHHHHHHHHHHcCCCcEEEECcCCCCcccccCcccHHHHHHhh--hhcCceEEeccccEEcccCCceEEcccc
Confidence 111 345422 24678999998853 2222222222221 1222222211 0 00
Q ss_pred ----CCCCCeeehHHHHHHHHhhc
Q 030486 151 ----GSSGDKLSSSTLRKLEAEKA 170 (176)
Q Consensus 151 ----~~~~~~ISST~IR~~i~~g~ 170 (176)
..+-..||||.||+++++|.
T Consensus 307 p~~~~~~~~~ISgT~iR~~L~~G~ 330 (349)
T 1v47_A 307 PEGHREKRTAISMTKVRALLREGK 330 (349)
T ss_dssp CGGGGGGCEECCHHHHHHHHHTTC
T ss_pred CccCCCcccccCHHHHHHHHHCcC
Confidence 11235799999999999996
No 41
>1r6x_A ATP:sulfate adenylyltransferase; APS kinase-like domain; 1.40A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5
Probab=97.88 E-value=0.00011 Score=61.87 Aligned_cols=93 Identities=16% Similarity=0.165 Sum_probs=56.3
Q ss_pred CeEEEeCcCCcCCHHHHHHHHHHHHHhcCCeEEEEccCCCCCCcCcCCCCCCHHHHHHHHHHHHHhcCCCceEEEeec--
Q 030486 22 GAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTEPI-- 99 (176)
Q Consensus 22 ~~vv~~G~FDgvH~GH~~ll~~a~~~~~~~~~v~vt~~~~~~~k~~~~~l~~~~eR~~~l~~~~~~~~~~~~v~~~~l-- 99 (176)
+.|++..+++|+|+||..++.++.......+.+ .++....+ +.. .+.+-|++..+.+++.+++ ..+-...+
T Consensus 188 ~~VvafqtrNP~HraH~e~~~r~a~e~~~~lll----hPlvG~tK-~~D-ip~~vR~~~~~~~l~~yp~-~~v~l~~~p~ 260 (395)
T 1r6x_A 188 DRVVAFQTRNPMHRAHRELTVRAAREANAKVLI----HPVVGLTK-PGD-IDHHTRVRVYQEIIKRYPN-GIAFLSLLPL 260 (395)
T ss_dssp CCEEEECCSSCCCHHHHHHHHHHHHHTTCEEEE----CCBCSBCC-TTC-CCHHHHHHHHHHHGGGSST-TCEEECCBCC
T ss_pred CcEEEeccCCCcchhhHHHHHHHHHHcCCcEEE----EECCCCCC-CCC-CCHHHHHHHHHHHHHhCCC-ccEEEEecch
Confidence 578999999999999977766666543222322 12221111 122 5899999999999988844 33322111
Q ss_pred cCCC-CCc--------cccCCccEEEEcCCc
Q 030486 100 TDPY-GPS--------IVDENLEAIVVSKET 121 (176)
Q Consensus 100 ~~~~-~~~--------~~~~~~~~ivvG~d~ 121 (176)
.-.| ||. -...++.+++||.|.
T Consensus 261 ~mryAGPrEai~HAiiRkN~GcthfIVGRDh 291 (395)
T 1r6x_A 261 AMRMSGDREAVWHAIIRKNYGASHFIVGRDH 291 (395)
T ss_dssp BCCCCHHHHHHHHHHHHHHTTCSEEEECTTT
T ss_pred hhhhcCcHHHHHHHHHHHHcCCceEEECCCC
Confidence 1111 221 013588999999875
No 42
>3uk2_A Pantothenate synthetase; AMP, structural genomics, seattle S genomics center for infectious disease, ssgcid, ligase; HET: AMP; 2.25A {Burkholderia thailandensis} SCOP: c.26.1.0
Probab=97.64 E-value=6.9e-05 Score=60.36 Aligned_cols=62 Identities=15% Similarity=0.295 Sum_probs=45.6
Q ss_pred CeEEEeCcCCcCCHHHHHHHHHHHHHhcCCeEEEEccCC--CCCCcCcCCCCCCHHHHHHHHHHH
Q 030486 22 GAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGP--MLTNKQFAELIQPVDERMRNVEAY 84 (176)
Q Consensus 22 ~~vv~~G~FDgvH~GH~~ll~~a~~~~~~~~~v~vt~~~--~~~~k~~~~~l~~~~eR~~~l~~~ 84 (176)
+++.+..|..++|.||+.|+++|++.++ .+++.+.-+| +.++......+.+++++.++++++
T Consensus 22 ~~ig~VPTMG~LH~GH~sLi~~A~~~~d-~vVvSifvnP~qf~~~ed~~~yprt~e~d~~ll~~~ 85 (283)
T 3uk2_A 22 NRTAFVPTMGNLHEGHLSLMRLARQHGD-PVVASIFVNRLQFGPNEDFDKYPRTLQEDIEKLQKE 85 (283)
T ss_dssp SSCEEEEECSSCCHHHHHHHHHHHTTCS-SEEEEECCCGGGSCTTSCTTTSCCCHHHHHHHHHTT
T ss_pred CeEEEECCCCcccHHHHHHHHHHHHhCC-EEEEEEcCCHHHcCCcccccccCCCHHHHHHHHHHc
Confidence 4678889999999999999999999873 4443333333 222333456678999999999876
No 43
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A*
Probab=97.51 E-value=0.00075 Score=58.72 Aligned_cols=93 Identities=18% Similarity=0.170 Sum_probs=56.7
Q ss_pred CeEEEeCcCCcCCHHHHHHHHHHHHHhcCCeEEEEccCCCCCCcCcCCCCCCHHHHHHHHHHHHHhcCCCceEEE--eec
Q 030486 22 GAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQT--EPI 99 (176)
Q Consensus 22 ~~vv~~G~FDgvH~GH~~ll~~a~~~~~~~~~v~vt~~~~~~~k~~~~~l~~~~eR~~~l~~~~~~~~~~~~v~~--~~l 99 (176)
+.|++..+++|+|+||..++.++.....+.+.+-..-.+ .|. .. .+.+-|.+..+.+++.+++ ..+-. ..+
T Consensus 189 ~~v~afqtrnP~HraH~e~~~~~a~e~~~~lll~pl~g~---~k~--~d-i~~~~r~~~~~~~~~~yp~-~~~~l~~~p~ 261 (511)
T 1g8f_A 189 DRVVAFQTRNPMHRAHRELTVRAAREANAKVLIHPVVGL---TKP--GD-IDHHTRVRVYQEIIKRYPN-GIAFLSLLPL 261 (511)
T ss_dssp CCEEEEEESSCCCHHHHHHHHHHHHHHTCEEEEEEBCSB---CST--TC-CCHHHHHHHHHHHGGGSCT-TSEEECCBCC
T ss_pred CcEEEEecCCCCchHHHHHHHHHHHHcCCcEEEEECCCC---CCC--CC-CCHHHHHHHHHHHHHhCCc-ccEEEEecch
Confidence 578999999999999966666555543333433222221 121 22 5899999999999988844 33321 222
Q ss_pred cCCC-CCc--------cccCCccEEEEcCCc
Q 030486 100 TDPY-GPS--------IVDENLEAIVVSKET 121 (176)
Q Consensus 100 ~~~~-~~~--------~~~~~~~~ivvG~d~ 121 (176)
.-.| ||. -...++.+++||.|.
T Consensus 262 ~m~yaGprea~~hai~r~n~G~th~IvGrdh 292 (511)
T 1g8f_A 262 AMRMSGDREAVWHAIIRKNYGASHFIVGRDH 292 (511)
T ss_dssp BCCCCHHHHHHHHHHHHHHTTCSEEECCTTT
T ss_pred hhhccCcHHHHHHHHHHHhCCCceEEeCCCC
Confidence 1112 221 013588999999875
No 44
>3inn_A Pantothenate synthetase; ssgcid, SBRI, UW, decode, NIH, niaid, pantoate beta alanine ligase, ATP-binding, cytoplasm, ligase; HET: ATP; 2.10A {Brucella melitensis}
Probab=97.41 E-value=0.00017 Score=58.84 Aligned_cols=55 Identities=16% Similarity=0.238 Sum_probs=38.3
Q ss_pred EeCcCCcCCHHHHHHHHHHHHHhcCCeEEEEccCC--CCCCcCcCCCCCCHHHHHHHHHHH
Q 030486 26 LGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGP--MLTNKQFAELIQPVDERMRNVEAY 84 (176)
Q Consensus 26 ~~G~FDgvH~GH~~ll~~a~~~~~~~~~v~vt~~~--~~~~k~~~~~l~~~~eR~~~l~~~ 84 (176)
|.| ++|.||+.|+++|++.+ +.++|.+--+| +-++........++++..+++++.
T Consensus 50 TMG---~LH~GHlsLi~~A~~~~-d~vVVSIFVNP~QF~~~EDl~~YPRtle~D~~ll~~~ 106 (314)
T 3inn_A 50 TMG---YLHKGHLELVRRARVEN-DVTLVSIFVNPLQFGANEDLGRYPRDLERDAGLLHDA 106 (314)
T ss_dssp ECS---SCCHHHHHHHHHHHHHC-SEEEEEECCCGGGSCTTSSTTTCCCCHHHHHHHHHHT
T ss_pred CCC---ccCHHHHHHHHHHHHhC-CEEEEEECCChhhcCCCccccccCCCHHHHHHHHHhC
Confidence 556 69999999999999987 34444443333 333333344557899999999886
No 45
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus}
Probab=97.25 E-value=0.0018 Score=56.69 Aligned_cols=94 Identities=16% Similarity=0.113 Sum_probs=58.0
Q ss_pred CeEEEeCcCCcCCHHHHHHHHHHHHHhcCCeEEEEccCCCCCCcCcCCCCCCHHHHHHHHHHHHHhcCCCceEEEeec--
Q 030486 22 GAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTEPI-- 99 (176)
Q Consensus 22 ~~vv~~G~FDgvH~GH~~ll~~a~~~~~~~~~v~vt~~~~~~~k~~~~~l~~~~eR~~~l~~~~~~~~~~~~v~~~~l-- 99 (176)
++|++.=+++|+|+||..|+.+|+....+.+.|.+.-.+ .|. .. .+.+-|.+.++.+++.+-|...+-...+
T Consensus 164 ~~v~afqtrnP~Hr~H~~l~~~a~~~~~~~llv~p~~g~---~k~--~d-i~~~~R~~~~~~~~~~~~p~~~v~~~~~p~ 237 (546)
T 2gks_A 164 DKIVAFQTRNPMHRVHEELTKRAMEKVGGGLLLHPVVGL---TKP--GD-VDVYTRMRIYKVLYEKYYDKKKTILAFLPL 237 (546)
T ss_dssp SCEEEECCSSCCCHHHHHHHHHHHHHHTSEEEECCBCSB---CCT--TS-CCHHHHHHHHHHHHHHHSCTTTEEECBBCC
T ss_pred CcEEEEecCCCCcHHHHHHHHHHHHhcCCcEEEEeCcCC---CCC--CC-CCHHHHHHHHHHHHHhcCCCCcEEEeecCc
Confidence 578999999999999999999999743233433222111 121 22 5889999999999887633333322221
Q ss_pred cCCC-CCcc--------ccCCccEEEEcCCc
Q 030486 100 TDPY-GPSI--------VDENLEAIVVSKET 121 (176)
Q Consensus 100 ~~~~-~~~~--------~~~~~~~ivvG~d~ 121 (176)
.-.+ ||.. ...++.+++||.|.
T Consensus 238 ~m~~agprea~~ha~ir~n~G~th~ivgrdh 268 (546)
T 2gks_A 238 AMRMAGPREALWHGIIRRNYGATHFIVGRDH 268 (546)
T ss_dssp BCCCCTHHHHHHHHHHHHHTTCSEEEECTTT
T ss_pred hhhccCchHHHHHHHHHHhCCCCeEEECCCC
Confidence 1122 3320 13577899999663
No 46
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A*
Probab=96.96 E-value=0.0038 Score=55.01 Aligned_cols=92 Identities=16% Similarity=0.187 Sum_probs=56.8
Q ss_pred CeEEEeCcCCcCCHHHHHHHHHHHHHhcCCeEEEEccCCCCCCcCcCCCCCCHHHHHHHHHHHHHhcCCCceEEEeeccC
Q 030486 22 GAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTEPITD 101 (176)
Q Consensus 22 ~~vv~~G~FDgvH~GH~~ll~~a~~~~~~~~~v~vt~~~~~~~k~~~~~l~~~~eR~~~l~~~~~~~~~~~~v~~~~l~~ 101 (176)
+.|++.=+++|+|+||..|+.+|++...+.++|. ++....+ +.. .+.+-|.+.++.+++.+++ ..+-...+..
T Consensus 191 ~~v~afqtrnP~Hr~H~~l~~~a~~~~~~~llv~----pl~g~~k-~~d-i~~~~R~~~~~~~~~~~p~-~~v~l~~~p~ 263 (573)
T 1m8p_A 191 SRVVAFQTRNPMHRAHRELTVRAARSRQANVLIH----PVVGLTK-PGD-IDHFTRVRAYQALLPRYPN-GMAVLGLLGL 263 (573)
T ss_dssp CSEEEECCSSCCCHHHHHHHHHHHHHTTCEEEEC----CBCCCCC-TTC-HHHHHHHHHHHHHGGGSST-TSEEECBBCC
T ss_pred CeEEEEeeCCCcchhhHHHHHHHHHhcCCcEEEE----eCCCCCC-CCC-CCHHHHHHHHHHHHHhCCC-CcEEEEecCc
Confidence 5788899999999999999999997632333332 2111111 122 5789999999999888843 3332222211
Q ss_pred --CC-CCc--c------ccCCccEEEEcCC
Q 030486 102 --PY-GPS--I------VDENLEAIVVSKE 120 (176)
Q Consensus 102 --~~-~~~--~------~~~~~~~ivvG~d 120 (176)
.| ||. + ...++.+++||.|
T Consensus 264 ~m~~agprea~~ha~ir~n~G~th~ivgrd 293 (573)
T 1m8p_A 264 AMRMGGPREAIWHAIIRKNHGATHFIVGRD 293 (573)
T ss_dssp CCCCCHHHHHHHHHHHHHHHTCSEEEECTT
T ss_pred hhhccCchHHHHHHHHHHHCCCCeEEECCC
Confidence 11 221 0 1346789999966
No 47
>1x6v_B Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthethase 1; transferase, ATP sulfurylase, APS kinase, PAPS; HET: ADP; 1.75A {Homo sapiens} SCOP: b.122.1.3 c.26.1.5 c.37.1.4 PDB: 1xjq_B* 1xnj_B* 2qjf_A* 2ofx_A* 2ofw_A*
Probab=96.47 E-value=0.037 Score=49.26 Aligned_cols=95 Identities=20% Similarity=0.305 Sum_probs=58.1
Q ss_pred CeEEEeCcCCcCCHHHHHHHHHHHHH-hcC---CeEEEEccCCCCCCcCcCCCCCCHHHHHHHHHHHHHh--cCCCceEE
Q 030486 22 GAVVLGGTFDRLHDGHRLFLKASAEL-ARD---RIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKS--IKPELVVQ 95 (176)
Q Consensus 22 ~~vv~~G~FDgvH~GH~~ll~~a~~~-~~~---~~~v~vt~~~~~~~k~~~~~l~~~~eR~~~l~~~~~~--~~~~~~v~ 95 (176)
++|++.=+-+|+|+||..|.+.|++. ++. .-.+.+. +++...+ +.. .+.+-|++-.+.+++. ++++ .+-
T Consensus 413 ~~VvafqtrNP~HraHe~l~~~a~~~~~d~g~~~~~lll~--pl~G~tk-~~d-i~~~~r~~~~~~~~~~~y~p~~-~~~ 487 (630)
T 1x6v_B 413 DAVSAFQLRNPVHNGHALLMQDTHKQLLERGYRRPVLLLH--PLGGWTK-DDD-VPLMWRMKQHAAVLEEGVLNPE-TTV 487 (630)
T ss_dssp SEEEEEEESSCCCHHHHHHHHHHHHHHHHHTCSSEEEEEE--EBCSCCC-TTS-CCHHHHHHHHHHHHHTTSSCGG-GEE
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCcEEEE--eCcCCCC-CCC-CCHHHHHHHHHHHHHcCCCCCc-ceE
Confidence 57888999999999999999999874 331 1111122 1221111 122 5889999999999985 5543 332
Q ss_pred EeeccC--CC-CCc--c------ccCCccEEEEcCCc
Q 030486 96 TEPITD--PY-GPS--I------VDENLEAIVVSKET 121 (176)
Q Consensus 96 ~~~l~~--~~-~~~--~------~~~~~~~ivvG~d~ 121 (176)
...+.. .| ||. + ...++.+++||.|.
T Consensus 488 l~~~p~~mryaGPrEa~~hai~rkN~Gcth~IVGrdh 524 (630)
T 1x6v_B 488 VAIFPSPMMYAGPTEVQWHCRARMVAGANFYIVGRDP 524 (630)
T ss_dssp ECCBCCCCCCCHHHHHHHHHHHHHHTTCSEEEECSST
T ss_pred EeeccchhhhcCcHHHHHHHHHHHhCCCCeEEECCCC
Confidence 222211 12 221 0 14689999999885
No 48
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans}
Probab=96.34 E-value=0.02 Score=50.19 Aligned_cols=93 Identities=14% Similarity=0.103 Sum_probs=56.2
Q ss_pred CeEEEeCcCCcCCHHHHHHHHHHHHHhcCCeEEEEccCCCCCCcCcCCCCCCHHHHHHHHHHHHHhcCCCceEE--Eeec
Q 030486 22 GAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQ--TEPI 99 (176)
Q Consensus 22 ~~vv~~G~FDgvH~GH~~ll~~a~~~~~~~~~v~vt~~~~~~~k~~~~~l~~~~eR~~~l~~~~~~~~~~~~v~--~~~l 99 (176)
+.|++.=+-+|+|+||..++.++.....+.+.+ .+++...+ +. =.+.+-|++-.+.+++.++ ...+- .+++
T Consensus 164 ~~v~afqtrnp~Hrah~~~~~~~~~~~~~~lll----~pl~g~~k-~~-d~~~~~r~~~~~~~~~~~p-~~~~~l~~~p~ 236 (552)
T 3cr8_A 164 RRIIAWQARQPMHRAQYEFCLKSAIENEANLLL----HPQVGGDI-TE-APAYFGLVRSFLAIRDRFP-AATTQLSLLPA 236 (552)
T ss_dssp CSEEEECCSSCCCHHHHHHHHHHHHHTTCEEEE----CCBCCCCT-TT-CTTHHHHHHHHHHHGGGSC-GGGEEECBBCS
T ss_pred CceEEEecCCCCchHHHHHHHHHHHhcCCeEEE----EeccCCCC-CC-CCCHHHHHHHHHHHHHhCC-CccEEEeecch
Confidence 578888999999999999999998543232322 22222221 12 2578999999999998884 43332 2333
Q ss_pred cCCC-CCc------c--ccCCccEEEEcCCc
Q 030486 100 TDPY-GPS------I--VDENLEAIVVSKET 121 (176)
Q Consensus 100 ~~~~-~~~------~--~~~~~~~ivvG~d~ 121 (176)
.-.| ||. + ...++.+++||.|.
T Consensus 237 ~m~~agprea~~ha~~r~n~G~th~ivGrdh 267 (552)
T 3cr8_A 237 PPPEASGRALLLRAIVARNFGCSLLIAGGEH 267 (552)
T ss_dssp CCCCSCSHHHHHHHHHHHHHTCSEEEC----
T ss_pred hhcccCcHHHHHHHHHHHhCCCCeeeeCCCC
Confidence 2222 442 1 13588999999874
No 49
>3q12_A Pantoate--beta-alanine ligase; structural genomics, center for structural genomics of infec diseases, csgid; HET: PAF; 1.58A {Yersinia pestis} SCOP: c.26.1.4 PDB: 3q10_A* 3mue_A 1iho_A 3guz_A*
Probab=95.44 E-value=0.021 Score=45.92 Aligned_cols=58 Identities=21% Similarity=0.347 Sum_probs=35.1
Q ss_pred eEE--EeCcCCcCCHHHHHHHHHHHHHhcCCeEEEEccCCCC--CCcCcCCCCCCHHHHHHHHHHH
Q 030486 23 AVV--LGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPML--TNKQFAELIQPVDERMRNVEAY 84 (176)
Q Consensus 23 ~vv--~~G~FDgvH~GH~~ll~~a~~~~~~~~~v~vt~~~~~--~~k~~~~~l~~~~eR~~~l~~~ 84 (176)
+++ |.|. +|-||+.|+++|++.+ +.++|.+--+|.- ++......--+++.=.+++++.
T Consensus 27 IgfVPTMG~---LH~GHlsLv~~Ar~~~-d~vVVSIFVNP~QF~~~EDl~~YPRtle~D~~~l~~~ 88 (287)
T 3q12_A 27 IALVPTMGN---LHEGHMTLVDEAKTRA-DVVVVTIFVNPLQFERPDDLAHYPRTLQEDCEKLTRH 88 (287)
T ss_dssp EEEEEECSS---CCHHHHHHHHHHHTTS-SEEEEEECCCGGGCSSHHHHHHSCCCHHHHHHHHHHH
T ss_pred EEEEcCCCc---ccHHHHHHHHHHHHhC-CEEEEEeccCcccCCCcchhhcCCCCHHHHHHHHHHC
Confidence 455 6775 9999999999999887 3555444333321 2211111124567667777776
No 50
>3mxt_A Pantothenate synthetase; alpha-beta-alpha, structural genomics, center for structural of infectious diseases, csgid, ligase; HET: MSE; 1.85A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3uy4_A*
Probab=87.59 E-value=1.5 Score=35.19 Aligned_cols=54 Identities=22% Similarity=0.435 Sum_probs=32.9
Q ss_pred EeCcCCcCCHHHHHHHHHHHHHhcCCeEEEEccCC--CCCCcCcCCCCCCHHHHHHHHHHH
Q 030486 26 LGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGP--MLTNKQFAELIQPVDERMRNVEAY 84 (176)
Q Consensus 26 ~~G~FDgvH~GH~~ll~~a~~~~~~~~~v~vt~~~--~~~~k~~~~~l~~~~eR~~~l~~~ 84 (176)
|.| .+|-||+.|+++|++ + +.++|.+--+| +-++......--+++.=.+++++.
T Consensus 32 TMG---aLH~GHlsLv~~Ar~-~-d~VVVSIFVNP~QF~~~EDl~~YPRtle~D~~ll~~~ 87 (285)
T 3mxt_A 32 TMG---FLHDGHLSLVKHAKT-Q-DKVIVSIFVNPMQFGPNEDFSSYPRDLERDIKMCQDN 87 (285)
T ss_dssp ECS---SCCHHHHHHHHHHTT-S-SEEEEEECCCGGGCCTTSCTTTSCCCHHHHHHHHHHT
T ss_pred CCC---cccHHHHHHHHHHHh-C-CEEEEEeccCccccCCchhhhcCCCCHHHHHHHHHHC
Confidence 556 599999999999998 6 45444433232 222222222234677777777765
No 51
>3n8h_A Pantothenate synthetase; alpha-beta sandwich, ligase, structural genomics, structural of infectious diseases; HET: MSE AMP GOL; 2.00A {Francisella tularensis subsp} PDB: 3qtt_A*
Probab=87.18 E-value=0.5 Score=37.47 Aligned_cols=62 Identities=13% Similarity=0.270 Sum_probs=36.1
Q ss_pred CeEEEeCcCCcCCHHHHHHHHHHHHHhcCCeEEEEccCCCC--CCcCcCCCCCCHHHHHHHHHHH
Q 030486 22 GAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPML--TNKQFAELIQPVDERMRNVEAY 84 (176)
Q Consensus 22 ~~vv~~G~FDgvH~GH~~ll~~a~~~~~~~~~v~vt~~~~~--~~k~~~~~l~~~~eR~~~l~~~ 84 (176)
+++-+.-|-=.+|-||+.|+++|++.++ .++|.+--+|.- ++......--+++.=.+++++.
T Consensus 24 ~~ig~VPTMGaLH~GHlsLv~~Ar~~~d-~vVVSIFVNP~QF~~~EDl~~YPRtle~D~~ll~~~ 87 (264)
T 3n8h_A 24 QKIGFVPTMGALHNGHISLIKKAKSEND-VVIVSIFVNPTQFNNPNDYQTYPNQLQQDIQILASL 87 (264)
T ss_dssp SCEEEEEECSSCCHHHHHHHHHHHHHCS-EEEEEECCCGGGCSCHHHHHHSCCCHHHHHHHHHHT
T ss_pred CcEEEECCCcchhHHHHHHHHHHHHhCC-EEEEEEccCcccCCCcchhhcCCCCHHHHHHHHHHC
Confidence 3455555556899999999999999873 444433323321 2111111124566667777765
No 52
>2f6r_A COA synthase, bifunctional coenzyme A synthase; 18044849, bifunctional coenzyme A synthase (COA synthase), S genomics; HET: ACO UNL; 1.70A {Mus musculus}
Probab=53.94 E-value=1.9 Score=33.85 Aligned_cols=42 Identities=29% Similarity=0.457 Sum_probs=10.6
Q ss_pred hhhhhhHHhCCCCceeEEEEeeeecC----CCCCeeehHHHHHHHH
Q 030486 126 LSVNKKRADRGLSQLKIEVVDLVSEG----SSGDKLSSSTLRKLEA 167 (176)
Q Consensus 126 ~~~~~~~~~~~~~~l~v~~v~~~~~~----~~~~~ISST~IR~~i~ 167 (176)
-.+|+.|.+.++.+|.+.+|+++... .+..+||||..|..+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~l 58 (281)
T 2f6r_A 13 MAVNRFRLENGKEELALYQIQLLKDQSHNENEEDKVSSSSFRQRIL 58 (281)
T ss_dssp ---------------CCCCCCEECC-----------------CEET
T ss_pred HHhhHHHHHCCCCcceEEEEEeecCCCcccccceeecchHHHHHHH
Confidence 35788999999999999998887642 2356899999987654
No 53
>2l8k_A NSP7, non-structural protein 7; viral protein; NMR {Equine arteritis virus}
Probab=38.69 E-value=16 Score=25.21 Aligned_cols=29 Identities=24% Similarity=0.119 Sum_probs=18.9
Q ss_pred ccccccccccCCCCCCCCCCeEEEeCcCC-cCC
Q 030486 3 MAILDESVVNSNISPDNSYGAVVLGGTFD-RLH 34 (176)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~vv~~G~FD-gvH 34 (176)
||-|++-+ ..+.....+.|+.+|.|| ..|
T Consensus 65 LAkL~~Fa---~~~~~~~GD~VV~LG~~d~~~v 94 (123)
T 2l8k_A 65 MAKLADFA---VEQEVTAGDRVVVIDGLDRMAH 94 (123)
T ss_dssp HHHHTTTT---CCCCCCTTSEEEESSCCSSCEE
T ss_pred HHHHHHHh---hccCCCCCCEEEEecceeEEEe
Confidence 45566655 344444558999999999 443
No 54
>1yi8_B Tryptophanyl-tRNA synthetase; ligase; HET: TRP; 2.10A {Deinococcus radiodurans} PDB: 1yia_B* 1yid_B* 2a4m_A*
Probab=24.48 E-value=96 Score=25.13 Aligned_cols=26 Identities=31% Similarity=0.416 Sum_probs=15.4
Q ss_pred CCHHHHH-HHHHHHHHhcCC-eEEEEcc
Q 030486 33 LHDGHRL-FLKASAELARDR-IVVGVCD 58 (176)
Q Consensus 33 vH~GH~~-ll~~a~~~~~~~-~~v~vt~ 58 (176)
+|+||.. .+...+.+-+.+ .++.+..
T Consensus 35 lHLGn~~g~l~~~~~lQ~~~~~~~~IaD 62 (351)
T 1yi8_B 35 LHLGHLAGSLQNRVRLQDEAELFVLLAD 62 (351)
T ss_dssp CBHHHHHHTHHHHHHHTSSSEEEEEECH
T ss_pred ccHHHHHHHHHHHHHHHHhCCeEEEEec
Confidence 9999977 666665443333 3444443
No 55
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=23.65 E-value=1.2e+02 Score=20.88 Aligned_cols=26 Identities=12% Similarity=-0.101 Sum_probs=20.9
Q ss_pred CCeEEEeCcCCcCCHHHHHHHHHHHHH
Q 030486 21 YGAVVLGGTFDRLHDGHRLFLKASAEL 47 (176)
Q Consensus 21 ~~~vv~~G~FDgvH~GH~~ll~~a~~~ 47 (176)
...+++.|+++. +.|...+++.+...
T Consensus 23 ~~~i~~~G~~~~-~Kg~~~li~a~~~l 48 (177)
T 2f9f_A 23 GDFWLSVNRIYP-EKRIELQLEVFKKL 48 (177)
T ss_dssp CSCEEEECCSSG-GGTHHHHHHHHHHC
T ss_pred CCEEEEEecccc-ccCHHHHHHHHHhC
Confidence 457899999996 68988888877665
No 56
>2zp1_A Tyrosyl-tRNA synthetase; tRNA synthetases class I, ligase, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, nucleotide-binding; HET: IYR; 1.70A {Methanocaldococcus jannaschii} PDB: 1zh6_A* 1j1u_A* 1u7d_A 2q1g_A* 2pxh_A* 1zh0_A* 2q1i_A* 2ag6_A* 3qe4_A* 3d6u_A* 3d6v_A* 1u7x_A 3n2y_A* 2hgz_A*
Probab=22.89 E-value=1.1e+02 Score=24.27 Aligned_cols=26 Identities=31% Similarity=0.469 Sum_probs=17.2
Q ss_pred CCHHHHHHHHHHHHHhcC-C-eEEEEcc
Q 030486 33 LHDGHRLFLKASAELARD-R-IVVGVCD 58 (176)
Q Consensus 33 vH~GH~~ll~~a~~~~~~-~-~~v~vt~ 58 (176)
+|+||+--+...+.+-+. . +++.+..
T Consensus 41 lHlGhl~~l~~~~~lQ~~g~~~~~~i~D 68 (314)
T 2zp1_A 41 IHLGHYLQIKKMIDLQNAGFDIIILLAD 68 (314)
T ss_dssp CBHHHHHHHHHHHHHHHTTEEEEEEECH
T ss_pred cchhhHHHHHHHHHHHHCCCCEEEEEec
Confidence 999997777777776443 2 4455543
No 57
>2cya_A Tyrosyl-tRNA synthetase; tyrrs, aminoacylation, structural genomics, NPPSFA, national on protein structural and functional analyses; 2.20A {Aeropyrum pernix}
Probab=22.77 E-value=80 Score=25.73 Aligned_cols=33 Identities=15% Similarity=0.175 Sum_probs=20.6
Q ss_pred EEeCcCCc---CCHHHHHHHHHHHHHhcC-C-eEEEEcc
Q 030486 25 VLGGTFDR---LHDGHRLFLKASAELARD-R-IVVGVCD 58 (176)
Q Consensus 25 v~~G~FDg---vH~GH~~ll~~a~~~~~~-~-~~v~vt~ 58 (176)
++.| ||| +|+||.--+...+.+-+. + +++.+..
T Consensus 38 iy~G-~~PTg~lHlG~l~~l~~~~~lQ~~G~~~~~~iaD 75 (364)
T 2cya_A 38 GYIG-YEPSGVAHIGWLVWMYKVKDLVEAGVDFSVLEAT 75 (364)
T ss_dssp EEEE-ECCCSSCBTHHHHHHHHHHHHHHTTCEEEEEECH
T ss_pred EEec-cCCCCCccHhHHHHHHHHHHHHHCCCCEEEEEeC
Confidence 4444 555 999997777777776443 3 4444543
Done!