BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030488
(176 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255569758|ref|XP_002525843.1| poly-A binding protein, putative [Ricinus communis]
gi|223534848|gb|EEF36537.1| poly-A binding protein, putative [Ricinus communis]
Length = 198
Score = 300 bits (768), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 143/175 (81%), Positives = 154/175 (88%), Gaps = 1/175 (0%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEME+EA ALR+M AKV EM S QDP A S ANREEVDSRSVFVGNVDYSCT
Sbjct: 24 MKKRLKEMEDEAAALREMQAKVEKEMGSSQDPTAAASQ-ANREEVDSRSVFVGNVDYSCT 82
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNR+TIRTDK+GQPKGYAYVEFL+ EAVQEAL LNESELHGRQLKVT
Sbjct: 83 PEEVQQHFQSCGTVNRITIRTDKYGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVT 142
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPY 175
KRTNVPGMKQ RPRRPNP+M + RG+ +PP+ YSPYGYGK+PRFRMPMRYSPY
Sbjct: 143 AKRTNVPGMKQFRPRRPNPYMGFAPRGSQLPPYFYSPYGYGKVPRFRMPMRYSPY 197
>gi|449438769|ref|XP_004137160.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 196
Score = 296 bits (758), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 138/176 (78%), Positives = 154/176 (87%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLK+ME+EA ALR+M AKV EM+S QDPA+ +S ANREEVDSRSVFVGNVDYSCT
Sbjct: 21 MKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCT 80
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNR+TIRTDKFGQPKGYAYVEF++ EAVQEAL LNESELHGRQLKVT
Sbjct: 81 PEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVT 140
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 176
KRTN+PGMKQ+RPRR NPFM +SR + P+ +SPYGYGK+PRFRMP RY PYY
Sbjct: 141 AKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY 196
>gi|449523199|ref|XP_004168611.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 196
Score = 294 bits (752), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 137/176 (77%), Positives = 153/176 (86%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLK+ME+EA ALR+M AKV EM+S QDPA+ +S ANREEVDSRSVFVGNVDYSCT
Sbjct: 21 MKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCT 80
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNR+TIRTDKFGQPKGYAYVEF++ EAVQEAL LNESELHGRQLKVT
Sbjct: 81 PEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVT 140
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 176
RTN+PGMKQ+RPRR NPFM +SR + P+ +SPYGYGK+PRFRMP RY PYY
Sbjct: 141 AMRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY 196
>gi|358248734|ref|NP_001239931.1| uncharacterized protein LOC100791351 [Glycine max]
gi|255647673|gb|ACU24298.1| unknown [Glycine max]
Length = 197
Score = 291 bits (746), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 141/178 (79%), Positives = 154/178 (86%), Gaps = 2/178 (1%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEME+EA ALR+M AKV EM S QDPA +S AN+EE+DSRSVFVGNVDYSCT
Sbjct: 20 MKKRLKEMEDEAAALREMQAKVEKEMGSAQDPANASASQANKEEIDSRSVFVGNVDYSCT 79
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFL+ EAVQEAL LNESELHGRQLKVT
Sbjct: 80 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLEVEAVQEALLLNESELHGRQLKVT 139
Query: 121 VKRTNVPGMKQHRPRRP-NPFM-VYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 176
KRTN+PGMKQ+RPRR NP+M ++ R PPF+YSPYGYGK+PRFRM MRYSPYY
Sbjct: 140 AKRTNIPGMKQYRPRRTINPYMGGFRGRTPYAPPFIYSPYGYGKVPRFRMAMRYSPYY 197
>gi|224140775|ref|XP_002323754.1| predicted protein [Populus trichocarpa]
gi|222866756|gb|EEF03887.1| predicted protein [Populus trichocarpa]
Length = 199
Score = 286 bits (733), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 136/176 (77%), Positives = 155/176 (88%), Gaps = 1/176 (0%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS-SLANREEVDSRSVFVGNVDYSC 59
MK RLKEME+EA ALR+M AKV EM S QDP+A + S AN+EEVDSRSVFVGNVDY+C
Sbjct: 23 MKKRLKEMEDEAAALREMQAKVEKEMGSVQDPSASATASQANKEEVDSRSVFVGNVDYAC 82
Query: 60 TPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
TPEEVQQHFQ+CGTVNRVTIR+DK+GQPKGYAYVEF++ EAVQEAL LNESELHGRQLKV
Sbjct: 83 TPEEVQQHFQACGTVNRVTIRSDKYGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKV 142
Query: 120 TVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPY 175
T KRTNVPGMKQ R RRP+P+M + R AI+PP+L+SPYGYGK+ R+RMPMRYSPY
Sbjct: 143 TAKRTNVPGMKQFRARRPSPYMGFPPRAAIMPPYLFSPYGYGKVMRYRMPMRYSPY 198
>gi|358248311|ref|NP_001240115.1| uncharacterized protein LOC100784473 [Glycine max]
gi|255635956|gb|ACU18324.1| unknown [Glycine max]
Length = 197
Score = 285 bits (728), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 138/178 (77%), Positives = 152/178 (85%), Gaps = 2/178 (1%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEME+EA ALR+M AKV EM S QDPA +S AN+EE+DSRSVFVGNVDYSCT
Sbjct: 20 MKKRLKEMEDEAAALREMQAKVEKEMGSVQDPANASASQANKEEIDSRSVFVGNVDYSCT 79
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNR+TIRTDKFGQPKGYAYVEFL+ EAVQEAL LNESELHGRQLKVT
Sbjct: 80 PEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLEVEAVQEALLLNESELHGRQLKVT 139
Query: 121 VKRTNVPGMKQHRPRRP-NPFM-VYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 176
KRTN+PGMKQ+RPRR NP+M + R PF+YSPYGYGK+PRFRM MR+SPYY
Sbjct: 140 AKRTNIPGMKQYRPRRSTNPYMGGLRGRTPYAAPFIYSPYGYGKVPRFRMAMRHSPYY 197
>gi|224081120|ref|XP_002306300.1| predicted protein [Populus trichocarpa]
gi|222855749|gb|EEE93296.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 136/176 (77%), Positives = 149/176 (84%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEMEEEA ALR+M AKV EM + QDPA ++ ANREE DSRSVFVGNVDY+CT
Sbjct: 43 MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPATAAANQANREEADSRSVFVGNVDYACT 102
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNRVTI TDKFGQPKG+AYVEFL+ EAVQEAL LNESELHGRQLKV+
Sbjct: 103 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQEALALNESELHGRQLKVS 162
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 176
KRTNVPGMKQ+RPRR NP+M Y+ R PP+ YSPYGYGK+PRFR MRY PYY
Sbjct: 163 PKRTNVPGMKQYRPRRINPYMGYRFRRPYAPPYFYSPYGYGKVPRFRRSMRYMPYY 218
>gi|255581746|ref|XP_002531675.1| poly-A binding protein, putative [Ricinus communis]
gi|223528706|gb|EEF30719.1| poly-A binding protein, putative [Ricinus communis]
Length = 218
Score = 282 bits (722), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 135/176 (76%), Positives = 150/176 (85%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEMEEEA ALR+M AKV EM + QDPA+ ++ AN+EE DSRSVFVGNVDY+CT
Sbjct: 43 MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPASAAANQANKEETDSRSVFVGNVDYACT 102
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNRVTI TDKFGQPKG+AYVEFL+ EA+QEAL LNESELHGRQLKV
Sbjct: 103 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAIQEALLLNESELHGRQLKVL 162
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 176
KRTNVPGMKQ+RPRR NP+M Y+ R +PP+ YSPYGYGK PRFR PMRY PYY
Sbjct: 163 PKRTNVPGMKQYRPRRFNPYMGYRFRRPYVPPYFYSPYGYGKAPRFRRPMRYMPYY 218
>gi|356512681|ref|XP_003525045.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 215
Score = 278 bits (712), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 134/176 (76%), Positives = 148/176 (84%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEMEEEA ALR+M AKV E+ S QDPA +S AN+EE DSRSVFVGNVDY+CT
Sbjct: 40 MKRRLKEMEEEAAALREMQAKVDKEIGSVQDPANSAASQANKEEADSRSVFVGNVDYACT 99
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNRVTI TDKFGQPKG+AYVEF+++EAVQEAL LNESELHGRQLKV
Sbjct: 100 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVL 159
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 176
KRTNVPGMKQ+RPRR NP+M Y R PP+ YSPYGYGK+PRFR P RY PY+
Sbjct: 160 PKRTNVPGMKQYRPRRFNPYMAYGFRRPYTPPYFYSPYGYGKVPRFRRPNRYMPYH 215
>gi|224060413|ref|XP_002300187.1| predicted protein [Populus trichocarpa]
gi|222847445|gb|EEE84992.1| predicted protein [Populus trichocarpa]
Length = 199
Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 134/176 (76%), Positives = 153/176 (86%), Gaps = 1/176 (0%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLA-NREEVDSRSVFVGNVDYSC 59
MK RLKEME+EA AL +M AKV EM S QDP+A ++ NREEVDSRSVFVGNVDYSC
Sbjct: 23 MKKRLKEMEDEAAALLEMQAKVEKEMGSVQDPSASAAASQANREEVDSRSVFVGNVDYSC 82
Query: 60 TPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
TPEEVQQHFQ+CGT+NR+TIR+DK+GQPKGYAYVEFL+ E VQEAL LNESELHGRQLKV
Sbjct: 83 TPEEVQQHFQACGTINRITIRSDKYGQPKGYAYVEFLEPETVQEALLLNESELHGRQLKV 142
Query: 120 TVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPY 175
TVKRTN+PGMKQ R RRPNP+M + RGA +PP+L+SPYGYGK+ R+RMPMRYSPY
Sbjct: 143 TVKRTNLPGMKQFRARRPNPYMGFPPRGAPMPPYLFSPYGYGKVLRYRMPMRYSPY 198
>gi|217072312|gb|ACJ84516.1| unknown [Medicago truncatula]
gi|388501418|gb|AFK38775.1| unknown [Medicago truncatula]
Length = 216
Score = 274 bits (701), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 131/176 (74%), Positives = 149/176 (84%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
M+ RLKEMEEEA ALR+MHAKV E+ S QDPA+ +S N+EE D+RSVFVGNVDY+CT
Sbjct: 41 MRRRLKEMEEEAAALREMHAKVEKEIGSVQDPASVAASQENKEEADARSVFVGNVDYACT 100
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNRVTI TDKFGQPKG+AYVEF+++EAVQEAL L+ESELHGRQLKV
Sbjct: 101 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVETEAVQEALLLSESELHGRQLKVL 160
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 176
KRTNVPGMKQ+RPRR NP+M Y R PP++YSPYGYGK PR+R P RY PYY
Sbjct: 161 PKRTNVPGMKQYRPRRFNPYMAYGFRRPYAPPYMYSPYGYGKAPRYRRPNRYMPYY 216
>gi|449513137|ref|XP_004164242.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 212
Score = 272 bits (695), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 133/176 (75%), Positives = 147/176 (83%), Gaps = 2/176 (1%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEMEEEA ALR+M AKVG EM + QDPA +S A +EE DSRSVFVGNVDY+CT
Sbjct: 39 MKKRLKEMEEEAAALREMQAKVGKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACT 98
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNRVTI TDKFGQPKG+AYVEFL++EAVQEAL LNESELHGRQLKV
Sbjct: 99 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVL 158
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 176
KRTNVPGMKQ+R RR NP++ + R PP+ YSPYGYGK+PRFR MRY PYY
Sbjct: 159 PKRTNVPGMKQYRARRYNPYVGF--RRPYAPPYFYSPYGYGKMPRFRRSMRYMPYY 212
>gi|388498836|gb|AFK37484.1| unknown [Lotus japonicus]
Length = 200
Score = 271 bits (693), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 139/177 (78%), Positives = 150/177 (84%), Gaps = 1/177 (0%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEME+EA ALR+M AKV EM S DPA +S NREEVDSRSVFVGNVDYSCT
Sbjct: 24 MKKRLKEMEDEAAALREMQAKVEKEMGSVPDPANASASQTNREEVDSRSVFVGNVDYSCT 83
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFL+ EAVQEAL LNESELHGRQLKV+
Sbjct: 84 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLEVEAVQEALALNESELHGRQLKVS 143
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRG-AIIPPFLYSPYGYGKIPRFRMPMRYSPYY 176
KRTNVPGMKQ RPR PNP+M ++ R PPF ++PYGYGK+PRFRM MRYSPYY
Sbjct: 144 GKRTNVPGMKQFRPRAPNPYMGFRGRALFAPPPFAFAPYGYGKVPRFRMGMRYSPYY 200
>gi|224093736|ref|XP_002309968.1| predicted protein [Populus trichocarpa]
gi|222852871|gb|EEE90418.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 130/176 (73%), Positives = 146/176 (82%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEMEEEA ALR+M AKV EM + DPA+ ++ AN+EE DSRSVFVGNVDY+CT
Sbjct: 43 MKKRLKEMEEEAAALREMQAKVEKEMGAVPDPASAAANQANKEEADSRSVFVGNVDYACT 102
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNRVTI TDKFGQPKG+AYVEF++ EAVQEAL LNESELHGRQLKV+
Sbjct: 103 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQEALALNESELHGRQLKVS 162
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 176
KRTNVPGMKQ+ PR NP+M + R PP+ YSPYGYGK+PRFR MRY PYY
Sbjct: 163 PKRTNVPGMKQYHPRSFNPYMGNRFRRPYAPPYFYSPYGYGKVPRFRRSMRYMPYY 218
>gi|356525457|ref|XP_003531341.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 220
Score = 270 bits (690), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 133/176 (75%), Positives = 147/176 (83%), Gaps = 1/176 (0%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEMEEEA ALR+M AKV E+ S QDPA +S AN+EE D+RSVFVGNVDY+CT
Sbjct: 46 MKRRLKEMEEEAAALREMQAKVEKEIGSVQDPANAAASQANKEEADARSVFVGNVDYACT 105
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNRVTI TDKFGQPKG+AYVEF+++EAVQEAL LNESELHGRQLKV
Sbjct: 106 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVL 165
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 176
KRTNVPGMKQ+RPR NP+M Y R P+LYSPYGYGK+PRFR P RY PYY
Sbjct: 166 PKRTNVPGMKQYRPRCFNPYMAYGFRRPYT-PYLYSPYGYGKVPRFRRPNRYMPYY 220
>gi|449451417|ref|XP_004143458.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
gi|449496421|ref|XP_004160130.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 212
Score = 269 bits (688), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 130/177 (73%), Positives = 147/177 (83%), Gaps = 1/177 (0%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEMEEEA ALR+M AKV EM + QDPA S ++EE DSRSVFVGNVDY+CT
Sbjct: 36 MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACT 95
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNRVTI TDKFG PKG+AYVEF+++EA+QEAL LNE+ELHGRQLKV
Sbjct: 96 PEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAIQEALLLNETELHGRQLKVQ 155
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPY-GYGKIPRFRMPMRYSPYY 176
KRTNVPGMKQ+ P+R NP+M Y+SR +PP+ YSPY GYGK PRFR PMRY PYY
Sbjct: 156 QKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGGYGKTPRFRRPMRYMPYY 212
>gi|449458283|ref|XP_004146877.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 212
Score = 268 bits (686), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 132/176 (75%), Positives = 146/176 (82%), Gaps = 2/176 (1%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEMEEEA ALR+M AKV EM + QDPA +S A +EE DSRSVFVGNVDY+CT
Sbjct: 39 MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACT 98
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNRVTI TDKFGQPKG+AYVEFL++EAVQEAL LNESELHGRQLKV
Sbjct: 99 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVL 158
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 176
KRTNVPGMKQ+R RR NP++ + R PP+ YSPYGYGK+PRFR MRY PYY
Sbjct: 159 PKRTNVPGMKQYRARRYNPYVGF--RRPYAPPYFYSPYGYGKMPRFRRSMRYMPYY 212
>gi|255637596|gb|ACU19123.1| unknown [Glycine max]
Length = 205
Score = 267 bits (682), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 128/166 (77%), Positives = 141/166 (84%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEMEEEA ALR+M AKV E+ S QDPA +S AN+EE DSRSVFVGNVDY+CT
Sbjct: 40 MKRRLKEMEEEAAALREMQAKVDKEIGSVQDPANSAASQANKEEADSRSVFVGNVDYACT 99
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNRVTI TDKFGQPKG+AYVEF+++EAVQEAL LNESELHGRQLKV
Sbjct: 100 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVL 159
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRF 166
KRTNVPGMKQ+RPRR NP+M Y R PP+ YSPYGYGK+PRF
Sbjct: 160 PKRTNVPGMKQYRPRRFNPYMAYGFRRPYTPPYFYSPYGYGKVPRF 205
>gi|357476333|ref|XP_003608452.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355509507|gb|AES90649.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 199
Score = 266 bits (679), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 135/179 (75%), Positives = 150/179 (83%), Gaps = 3/179 (1%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEME+EA AL++M AKV EM S QDPA +S NREEVD+RS+FVGNVDY+CT
Sbjct: 21 MKKRLKEMEDEAAALKEMQAKVEKEMGSVQDPANASASQINREEVDARSIFVGNVDYACT 80
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PE+VQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEF++ EAVQEAL LNESELHGRQLKVT
Sbjct: 81 PEDVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFVEVEAVQEALLLNESELHGRQLKVT 140
Query: 121 VKRTNVPGMKQHRPRRP-NPFMVYQSR--GAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 176
KRTNVPGMKQ RPRRP NP+M ++ R A + +PYGYGKIPRFRM MRYSPYY
Sbjct: 141 AKRTNVPGMKQFRPRRPSNPYMGFRGRTPYAPPFAYAPAPYGYGKIPRFRMGMRYSPYY 199
>gi|297797553|ref|XP_002866661.1| polyadenylate-binding protein family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312496|gb|EFH42920.1| polyadenylate-binding protein family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 220
Score = 264 bits (675), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 128/175 (73%), Positives = 148/175 (84%), Gaps = 1/175 (0%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEME+EA ALR+M AKV EM + QDPA+ ++ A +EEVD+RSVFVGNVDY+CT
Sbjct: 46 MKKRLKEMEDEAAALREMQAKVEKEMGA-QDPASIAANQAGKEEVDARSVFVGNVDYACT 104
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQ+CGTV+RVTI TDKFGQPKG+AYVEF++ EAVQEAL LNESELHGRQLKV
Sbjct: 105 PEEVQQHFQTCGTVHRVTILTDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVL 164
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPY 175
KRTNVPG+KQ R RR NP+M Y+ R +PP++YSPYGYGK PRFR PMRY PY
Sbjct: 165 QKRTNVPGLKQFRGRRFNPYMGYRFRRPFMPPYMYSPYGYGKAPRFRRPMRYMPY 219
>gi|119720774|gb|ABL97957.1| poly(A)-binding protein II-like [Brassica rapa]
Length = 220
Score = 264 bits (675), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 128/175 (73%), Positives = 147/175 (84%), Gaps = 1/175 (0%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEME+EA ALR+M AKV EM + QDPA ++ A +EEVD+RSVFVGNVDY+CT
Sbjct: 46 MKKRLKEMEDEAAALREMQAKVEKEMGA-QDPATLAANQAGKEEVDARSVFVGNVDYACT 104
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTV+RVTI TDKFGQPKG+AYVEF++ EA+QEAL LNESELHGRQLKV
Sbjct: 105 PEEVQQHFQSCGTVHRVTILTDKFGQPKGFAYVEFVEVEAIQEALQLNESELHGRQLKVL 164
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPY 175
KRTNVPG+KQHR RR NP+M Y+ R + P++YSPYGYGK PRFR PMRY PY
Sbjct: 165 PKRTNVPGLKQHRGRRFNPYMGYRFRRPFMSPYMYSPYGYGKAPRFRRPMRYMPY 219
>gi|388500100|gb|AFK38116.1| unknown [Medicago truncatula]
Length = 199
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 134/179 (74%), Positives = 149/179 (83%), Gaps = 3/179 (1%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEME+EA AL++M AKV EM S QDPA +S NREEVD+RS+FVGNVDY+CT
Sbjct: 21 MKKRLKEMEDEAAALKEMQAKVEKEMGSIQDPANASASQINREEVDARSIFVGNVDYACT 80
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PE+VQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEF++ EA QEAL LNESELHGRQLKVT
Sbjct: 81 PEDVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFVEVEAAQEALLLNESELHGRQLKVT 140
Query: 121 VKRTNVPGMKQHRPRRP-NPFMVYQSR--GAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 176
KRTNVPGMKQ RPRRP NP+M ++ R A + +PYGYGKIPRFRM MRYSPYY
Sbjct: 141 AKRTNVPGMKQFRPRRPSNPYMGFRGRTPYAPPFAYAPAPYGYGKIPRFRMGMRYSPYY 199
>gi|15238140|ref|NP_196597.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|7671468|emb|CAB89408.1| RNA binding protein-like [Arabidopsis thaliana]
gi|28393013|gb|AAO41941.1| putative polyadenylate-binding protein II (PAB2) [Arabidopsis
thaliana]
gi|28827384|gb|AAO50536.1| putative polyadenylate-binding protein II (PAB2) [Arabidopsis
thaliana]
gi|332004146|gb|AED91529.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 217
Score = 263 bits (671), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 144/175 (82%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEMEEEA ALR+M AKV EM + QDPA+ ++ +EEVD+RSV+VGNVDY+CT
Sbjct: 42 MKRRLKEMEEEAAALREMQAKVEKEMGATQDPASMAANQEGKEEVDARSVYVGNVDYACT 101
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQ HFQ+CGTVNRVTI DKFGQPKG+AYVEF++ EAVQEAL LNESELHGRQLKV+
Sbjct: 102 PEEVQLHFQTCGTVNRVTILMDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVS 161
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPY 175
KRTNVPGMKQ+ P R NP M Y+ R +PP+ YSPYGYGK PRFR PMRY PY
Sbjct: 162 PKRTNVPGMKQYHPGRFNPSMGYRFRRPFVPPYFYSPYGYGKAPRFRRPMRYMPY 216
>gi|302803015|ref|XP_002983261.1| hypothetical protein SELMODRAFT_117870 [Selaginella moellendorffii]
gi|300148946|gb|EFJ15603.1| hypothetical protein SELMODRAFT_117870 [Selaginella moellendorffii]
Length = 219
Score = 262 bits (669), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 126/176 (71%), Positives = 143/176 (81%), Gaps = 2/176 (1%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEME+EA ALR M AKV EM + QD A +S A +EE D+RSV+VGNVDYSCT
Sbjct: 46 MKKRLKEMEDEAAALRDMQAKVEKEMGASQD--ANAASQAGKEEADARSVYVGNVDYSCT 103
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNRVTI TDKFGQPKGYAYVEFL+ EAVQ A+ LNESELHGR LKV+
Sbjct: 104 PEEVQQHFQSCGTVNRVTILTDKFGQPKGYAYVEFLEGEAVQNAILLNESELHGRPLKVS 163
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 176
KRTNVPGMKQ+R RR +P Y +R A +PP+ Y+PYG+GKIPRFR MRY PY+
Sbjct: 164 AKRTNVPGMKQYRGRRFDPSYAYMTRRAYMPPYAYAPYGFGKIPRFRRAMRYRPYF 219
>gi|15238390|ref|NP_201329.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|14423494|gb|AAK62429.1|AF386984_1 poly(A)-binding protein II-like [Arabidopsis thaliana]
gi|10178188|dbj|BAB11662.1| poly(A)-binding protein II-like [Arabidopsis thaliana]
gi|23197620|gb|AAN15337.1| poly(A)-binding protein II-like [Arabidopsis thaliana]
gi|332010647|gb|AED98030.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 220
Score = 261 bits (668), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 127/175 (72%), Positives = 147/175 (84%), Gaps = 1/175 (0%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEME+EA ALR+M AKV EM + QDPA+ ++ A +EEVD+RSVFVGNVDY+CT
Sbjct: 46 MKKRLKEMEDEAAALREMQAKVEKEMGA-QDPASIAANQAGKEEVDARSVFVGNVDYACT 104
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQ+CGTV+RVTI TDKFGQPKG+AYVEF++ EAVQEAL LNESELHGRQLKV
Sbjct: 105 PEEVQQHFQTCGTVHRVTILTDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVL 164
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPY 175
KRTNVPG+KQ R RR NP+M Y+ R + P++YSPYGYGK PRFR PMRY PY
Sbjct: 165 QKRTNVPGLKQFRGRRFNPYMGYRFRRPFMSPYMYSPYGYGKAPRFRRPMRYMPY 219
>gi|302755738|ref|XP_002961293.1| hypothetical protein SELMODRAFT_74095 [Selaginella moellendorffii]
gi|300172232|gb|EFJ38832.1| hypothetical protein SELMODRAFT_74095 [Selaginella moellendorffii]
Length = 221
Score = 261 bits (667), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 126/176 (71%), Positives = 143/176 (81%), Gaps = 2/176 (1%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEME+EA ALR M AKV EM + QD A +S A +EE D+RSV+VGNVDYSCT
Sbjct: 48 MKKRLKEMEDEAAALRDMQAKVEKEMGAGQD--ANAASQAGKEEADARSVYVGNVDYSCT 105
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNRVTI TDKFGQPKGYAYVEFL+ EAVQ A+ LNESELHGR LKV+
Sbjct: 106 PEEVQQHFQSCGTVNRVTILTDKFGQPKGYAYVEFLEGEAVQNAILLNESELHGRPLKVS 165
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 176
KRTNVPGMKQ+R RR +P Y +R A +PP+ Y+PYG+GKIPRFR MRY PY+
Sbjct: 166 AKRTNVPGMKQYRGRRFDPSYAYMTRRAYMPPYAYAPYGFGKIPRFRRAMRYRPYF 221
>gi|225454892|ref|XP_002279148.1| PREDICTED: polyadenylate-binding protein 2-like [Vitis vinifera]
Length = 226
Score = 255 bits (651), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 121/175 (69%), Positives = 143/175 (81%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
M+ RLKE+EEEA ALR+M AKV EM + QD ++ ++ A +EEVDSRS++VGNVDY+CT
Sbjct: 52 MRKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSASATQAEKEEVDSRSIYVGNVDYACT 111
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNRVTI TDKFGQPKG+AYVEF++ +AVQ AL LNESELHGRQLKV+
Sbjct: 112 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNESELHGRQLKVS 171
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPY 175
KRTN+PGMKQ+R RRPNPF R + P Y PYGYG++PRFR PMRY PY
Sbjct: 172 AKRTNIPGMKQYRGRRPNPFGFRGRRPFMPGPSFYPPYGYGRVPRFRRPMRYRPY 226
>gi|147827572|emb|CAN77560.1| hypothetical protein VITISV_031100 [Vitis vinifera]
Length = 175
Score = 254 bits (650), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 121/175 (69%), Positives = 143/175 (81%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
M+ RLKE+EEEA ALR+M AKV EM + QD ++ ++ A +EEVDSRS++VGNVDY+CT
Sbjct: 1 MRKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSASATQAEKEEVDSRSIYVGNVDYACT 60
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNRVTI TDKFGQPKG+AYVEF++ +AVQ AL LNESELHGRQLKV+
Sbjct: 61 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNESELHGRQLKVS 120
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPY 175
KRTN+PGMKQ+R RRPNPF R + P Y PYGYG++PRFR PMRY PY
Sbjct: 121 AKRTNIPGMKQYRGRRPNPFGFRGRRPFMPGPSFYPPYGYGRVPRFRRPMRYRPY 175
>gi|346464877|gb|AEO32283.1| hypothetical protein [Amblyomma maculatum]
Length = 207
Score = 254 bits (648), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 124/167 (74%), Positives = 141/167 (84%), Gaps = 2/167 (1%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEMEEEA ALR+M AKV EM + QDPA+ ++ +++EVDSRSVFVGNVDYSCT
Sbjct: 42 MKKRLKEMEEEAAALREMQAKVEKEMGAGQDPASAAANQESKQEVDSRSVFVGNVDYSCT 101
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNRVTI TDKFGQPKGYAYVEFL+ EAVQEAL LNESELHGRQLKV+
Sbjct: 102 PEEVQQHFQSCGTVNRVTILTDKFGQPKGYAYVEFLEVEAVQEALQLNESELHGRQLKVS 161
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFR 167
KRTNVPGMKQ+R RR NP++ + R +P YSP+GYGK+PRFR
Sbjct: 162 AKRTNVPGMKQYRMRRFNPYIGTRYRRPYMP--YYSPFGYGKVPRFR 206
>gi|449458309|ref|XP_004146890.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
2-like [Cucumis sativus]
Length = 237
Score = 253 bits (645), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 123/175 (70%), Positives = 143/175 (81%), Gaps = 1/175 (0%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKE+EEEA ALR+M AKV EM + QD ++ ++ A +EEVDSRSV+VGNVDY+CT
Sbjct: 64 MKRRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSVYVGNVDYACT 123
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNRVTI TDKFG PKG+AYVEF++ +AVQ AL LNESELHGRQLKV+
Sbjct: 124 PEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVS 183
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPY 175
KRTNVPGMKQ+R RRPNPF ++ R IP Y YGYG++PRFR PMRY PY
Sbjct: 184 AKRTNVPGMKQYRGRRPNPFG-FRGRRPFIPTAPYPSYGYGRVPRFRRPMRYRPY 237
>gi|449519186|ref|XP_004166616.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 229
Score = 252 bits (644), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 123/175 (70%), Positives = 143/175 (81%), Gaps = 1/175 (0%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKE+EEEA ALR+M AKV EM + QD ++ ++ A +EEVDSRSV+VGNVDY+CT
Sbjct: 56 MKRRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSVYVGNVDYACT 115
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNRVTI TDKFG PKG+AYVEF++ +AVQ AL LNESELHGRQLKV+
Sbjct: 116 PEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVS 175
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPY 175
KRTNVPGMKQ+R RRPNPF ++ R IP Y YGYG++PRFR PMRY PY
Sbjct: 176 AKRTNVPGMKQYRGRRPNPFG-FRGRRPFIPTAPYPSYGYGRVPRFRRPMRYRPY 229
>gi|345121426|gb|AEN74948.1| poly(A)-binding protein 1 [Citrus sinensis]
Length = 234
Score = 252 bits (643), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 121/175 (69%), Positives = 143/175 (81%), Gaps = 1/175 (0%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKE+EEEA ALR+M AKV EM + QD ++ ++ A +EEVDSRS++VGNVDY+CT
Sbjct: 61 MKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACT 120
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNRVTI TDKFGQPKG+AYVEF++ +AVQ AL LNE+ELHGRQLKV+
Sbjct: 121 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVS 180
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPY 175
KRTN+PGMKQ R RRPN F ++ R IP + PYGYG+IPRFR PMRY PY
Sbjct: 181 AKRTNIPGMKQFRGRRPNTFG-FRGRRPFIPGVPFVPYGYGRIPRFRRPMRYRPY 234
>gi|224134274|ref|XP_002321779.1| predicted protein [Populus trichocarpa]
gi|222868775|gb|EEF05906.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 246 bits (628), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/175 (69%), Positives = 144/175 (82%), Gaps = 4/175 (2%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKE+EEEA ALR+M AKV EM + Q +A + A +EEVDSRS++VGNVDYSCT
Sbjct: 53 MKRRLKEIEEEAGALREMQAKVEKEMGAVQGASA---TQAEKEEVDSRSIYVGNVDYSCT 109
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNRVTI TDKFGQPKG+AYVEF++ +AVQ A+ LNESELHGRQLKV+
Sbjct: 110 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFIEVDAVQNAVLLNESELHGRQLKVS 169
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPY 175
KRTNVPGMKQ+R RRP+P+ ++S+ A +P Y YGYG++PRFR PMRY PY
Sbjct: 170 AKRTNVPGMKQYRGRRPSPYG-FRSQRAFMPAPFYPAYGYGRVPRFRRPMRYRPY 223
>gi|115448789|ref|NP_001048174.1| Os02g0757900 [Oryza sativa Japonica Group]
gi|46805689|dbj|BAD17090.1| putative poly(A) binding protein [Oryza sativa Japonica Group]
gi|113537705|dbj|BAF10088.1| Os02g0757900 [Oryza sativa Japonica Group]
gi|215692407|dbj|BAG87827.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623708|gb|EEE57840.1| hypothetical protein OsJ_08453 [Oryza sativa Japonica Group]
Length = 212
Score = 240 bits (613), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 123/176 (69%), Positives = 139/176 (78%), Gaps = 5/176 (2%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEMEEEA ALR M AKV EM DP+A S+ +E+VD+RSV+VGNVDY+CT
Sbjct: 42 MKRRLKEMEEEAAALRDMQAKVAKEMQGG-DPSA--STAEAKEQVDARSVYVGNVDYACT 98
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQ+CGTVNRVTI TDKFGQPKG+AYVEFL+ EAVQEAL+LNESELHGRQ+KV
Sbjct: 99 PEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEAVQEALNLNESELHGRQIKVA 158
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 176
KRTNVPGMKQ PR NP+ Y R P F PYGYG++PRFR PMRY PY+
Sbjct: 159 PKRTNVPGMKQRPPRGYNPYHGYPYRSYGAPYF--PPYGYGRVPRFRRPMRYRPYF 212
>gi|168065663|ref|XP_001784768.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663676|gb|EDQ50428.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 219
Score = 240 bits (613), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 125/176 (71%), Positives = 134/176 (76%), Gaps = 7/176 (3%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEMEEEA ALR M AKV EM++ QD S ANREE D+RSVFVGNVDYSCT
Sbjct: 51 MKKRLKEMEEEAAALRDMQAKVEKEMSAVQDSVGKDGSPANREEADARSVFVGNVDYSCT 110
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNRVTI TDKFGQPKG+AYVEFL+ EAVQ A+ LNESELH RQLKVT
Sbjct: 111 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQNAILLNESELHNRQLKVT 170
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 176
KRTNVPGMK +R R PF Y+ R PP YGK+PRFR PMRY PYY
Sbjct: 171 AKRTNVPGMKAYRGRPYAPFYGYRPRRP-YPPL------YGKMPRFRRPMRYRPYY 219
>gi|30683122|ref|NP_850803.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332004145|gb|AED91528.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 202
Score = 239 bits (611), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 115/161 (71%), Positives = 133/161 (82%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEMEEEA ALR+M AKV EM + QDPA+ ++ +EEVD+RSV+VGNVDY+CT
Sbjct: 42 MKRRLKEMEEEAAALREMQAKVEKEMGATQDPASMAANQEGKEEVDARSVYVGNVDYACT 101
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQ HFQ+CGTVNRVTI DKFGQPKG+AYVEF++ EAVQEAL LNESELHGRQLKV+
Sbjct: 102 PEEVQLHFQTCGTVNRVTILMDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVS 161
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYG 161
KRTNVPGMKQ+ P R NP M Y+ R +PP+ YSPYGYG
Sbjct: 162 PKRTNVPGMKQYHPGRFNPSMGYRFRRPFVPPYFYSPYGYG 202
>gi|46805690|dbj|BAD17091.1| putative poly(A) binding protein [Oryza sativa Japonica Group]
gi|125541200|gb|EAY87595.1| hypothetical protein OsI_09006 [Oryza sativa Indica Group]
gi|215678683|dbj|BAG92338.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 216
Score = 239 bits (609), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 123/179 (68%), Positives = 139/179 (77%), Gaps = 7/179 (3%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASK---QDPAAGGSSLANREEVDSRSVFVGNVDY 57
MK RLKEMEEEA ALR M AKV EM DP+A S+ +E+VD+RSV+VGNVDY
Sbjct: 42 MKRRLKEMEEEAAALRDMQAKVAKEMQGGPPGGDPSA--STAEAKEQVDARSVYVGNVDY 99
Query: 58 SCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQL 117
+CTPEEVQQHFQ+CGTVNRVTI TDKFGQPKG+AYVEFL+ EAVQEAL+LNESELHGRQ+
Sbjct: 100 ACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEAVQEALNLNESELHGRQI 159
Query: 118 KVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 176
KV KRTNVPGMKQ PR NP+ Y R P F PYGYG++PRFR PMRY PY+
Sbjct: 160 KVAPKRTNVPGMKQRPPRGYNPYHGYPYRSYGAPYF--PPYGYGRVPRFRRPMRYRPYF 216
>gi|297811137|ref|XP_002873452.1| polyadenylate-binding protein family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319289|gb|EFH49711.1| polyadenylate-binding protein family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 202
Score = 238 bits (607), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 114/161 (70%), Positives = 132/161 (81%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEMEEEA ALR+M AKV EM + QDPA ++ +EEVD+RSV+VGNVDY+CT
Sbjct: 42 MKKRLKEMEEEAAALREMQAKVEKEMGATQDPATMAANQEGKEEVDARSVYVGNVDYACT 101
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQ HFQ+CGTVNRVTI DKFGQPKG+AYVEF++ EAVQEAL LNESELHGRQLKV+
Sbjct: 102 PEEVQLHFQTCGTVNRVTILMDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVS 161
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYG 161
KRTNVPGMKQ+ P R NP + Y+ R +PP+ YSPYGYG
Sbjct: 162 PKRTNVPGMKQYHPGRFNPSIGYRFRRPFVPPYFYSPYGYG 202
>gi|212722530|ref|NP_001132591.1| uncharacterized protein LOC100194063 [Zea mays]
gi|194694844|gb|ACF81506.1| unknown [Zea mays]
gi|195635091|gb|ACG37014.1| polyadenylate-binding protein 2 [Zea mays]
gi|413938966|gb|AFW73517.1| polyadenylate-binding protein 2 [Zea mays]
Length = 212
Score = 238 bits (606), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 122/176 (69%), Positives = 137/176 (77%), Gaps = 5/176 (2%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEMEEEA ALR M AKV EM DP+A S+ +E+VD+RSV+VGNVDY+CT
Sbjct: 42 MKRRLKEMEEEAAALRDMQAKVAKEMQGG-DPSA--STAEAKEQVDARSVYVGNVDYACT 98
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQ+CGTVNRVTI TDKFGQPKG+AYVEFL+ E VQEAL+LNESELHGRQ+KV
Sbjct: 99 PEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEGVQEALNLNESELHGRQIKVA 158
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 176
KRTNVPGMKQ PR NP+ Y R P F PYGYG+ PRFR PMRY PY+
Sbjct: 159 PKRTNVPGMKQRPPRGYNPYHGYPYRSYGAPYF--PPYGYGRAPRFRRPMRYRPYF 212
>gi|387169522|gb|AFJ66183.1| hypothetical protein 11M19.19 [Arabidopsis halleri]
Length = 228
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 119/175 (68%), Positives = 139/175 (79%), Gaps = 5/175 (2%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+KE+EEEA ALR+M AK +M + QDP+ GG S A +EEVDSRS++VGNVDY+CT
Sbjct: 59 MKKRIKEIEEEAGALREMQAKAEKDMGAGQDPS-GGVSAAEKEEVDSRSIYVGNVDYACT 117
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNRVTI TDKFGQPKG+AYVEF++ EAVQ +L LNESELHGRQ+KV+
Sbjct: 118 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQNSLILNESELHGRQIKVS 177
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPY 175
KRTNVPGM+Q R RRP M RG + Y PY YG++PRFR PMRY PY
Sbjct: 178 AKRTNVPGMRQFRGRRPFRPM----RGFMPGVPFYPPYAYGRVPRFRRPMRYRPY 228
>gi|255539953|ref|XP_002511041.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223550156|gb|EEF51643.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 231
Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 113/163 (69%), Positives = 135/163 (82%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKE+EEEA ALR+M AKV EM + QD ++G ++ A +EEVDSRSV+VGNVDY+CT
Sbjct: 58 MKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSGSATQAEKEEVDSRSVYVGNVDYACT 117
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNRVTI TDKFGQPKG+AYVEF++ +AVQ AL LNESELHGRQLKV+
Sbjct: 118 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVS 177
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKI 163
KRTN+PGMKQ+R RRPNP+ ++SR +P PYGYG +
Sbjct: 178 AKRTNIPGMKQYRGRRPNPYSGFRSRRPFMPAPFSPPYGYGLL 220
>gi|297792425|ref|XP_002864097.1| hypothetical protein ARALYDRAFT_918145 [Arabidopsis lyrata subsp.
lyrata]
gi|297309932|gb|EFH40356.1| hypothetical protein ARALYDRAFT_918145 [Arabidopsis lyrata subsp.
lyrata]
Length = 228
Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 119/175 (68%), Positives = 139/175 (79%), Gaps = 5/175 (2%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+KE+EEEA ALR+M AK +M + QDP+ GG S A +EEVDSRS++VGNVDY+CT
Sbjct: 59 MKKRIKEIEEEAGALREMQAKAEKDMGAGQDPS-GGVSAAEKEEVDSRSIYVGNVDYACT 117
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNRVTI TDKFGQPKG+AYVEF++ EAVQ +L LNESELHGRQ+KV+
Sbjct: 118 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQNSLILNESELHGRQIKVS 177
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPY 175
KRTNVPGM+Q R RRP M RG + Y PY YG++PRFR PMRY PY
Sbjct: 178 AKRTNVPGMRQFRGRRPFRPM----RGFMPGVPFYPPYAYGRVPRFRRPMRYRPY 228
>gi|351723063|ref|NP_001235474.1| uncharacterized protein LOC100527139 [Glycine max]
gi|255631638|gb|ACU16186.1| unknown [Glycine max]
Length = 214
Score = 237 bits (604), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 115/175 (65%), Positives = 138/175 (78%), Gaps = 3/175 (1%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKE+EEEA+ALR+M AKV EM + QD + ++ A +EEVD+R ++VGNVDY+CT
Sbjct: 43 MKKRLKEIEEEASALREMQAKVEKEMGAVQDSSGTSATQAEKEEVDARPIYVGNVDYACT 102
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNRVTI TDKFGQPKG+AYVEF + +AVQ AL LNESELHGRQLKV+
Sbjct: 103 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFAEIDAVQNALLLNESELHGRQLKVS 162
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPY 175
KRTNVPGMKQ+ RRP F +SR + + PYGYG++PR+R P RY PY
Sbjct: 163 AKRTNVPGMKQYFGRRPAGF---RSRRPFMSAPFFPPYGYGRVPRYRRPTRYGPY 214
>gi|168066118|ref|XP_001784990.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663448|gb|EDQ50211.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 216
Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/176 (69%), Positives = 132/176 (75%), Gaps = 10/176 (5%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEMEEEA ALR M AKV EM + QD S NREE D+RSVFVGNVDYSCT
Sbjct: 51 MKKRLKEMEEEAAALRDMQAKVEKEMGAVQDSVGKDGSATNREEADARSVFVGNVDYSCT 110
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNRVTI TDKFGQPKG+AYVEFL+ EAVQ A+ L+ESELH R LKVT
Sbjct: 111 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQNAILLSESELHNRPLKVT 170
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 176
KRTNVPGMK +R R P+ Y+SR PP YGK+PRFR PMRY PYY
Sbjct: 171 AKRTNVPGMKAYRGR---PYYGYRSRRPYPPP-------YGKVPRFRRPMRYRPYY 216
>gi|326505260|dbj|BAK03017.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 210
Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 120/176 (68%), Positives = 137/176 (77%), Gaps = 5/176 (2%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEMEEEA ALR M AKV EM Q A S+ +E+VD+RSV+VGNVDY+CT
Sbjct: 40 MKRRLKEMEEEAAALRDMQAKVAKEM---QGGDANASTAEAKEQVDARSVYVGNVDYACT 96
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQ+CGTVNRVTI TDKFGQPKG+AYVEFL+ EAVQEAL+LNESELHGRQ+KV+
Sbjct: 97 PEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEAVQEALNLNESELHGRQIKVS 156
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 176
KRTNVPGMKQ PR +P+ Y R P F PYGYG++PRFR P RY PY+
Sbjct: 157 PKRTNVPGMKQRPPRGFSPYHAYPYRSYGAPYF--PPYGYGRVPRFRRPTRYRPYF 210
>gi|357138034|ref|XP_003570603.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 216
Score = 236 bits (601), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 122/178 (68%), Positives = 139/178 (78%), Gaps = 9/178 (5%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEMEEEA ALR M AKV EM Q A S+ +E+VD+RSV+VGNVDY+CT
Sbjct: 46 MKRRLKEMEEEAAALRDMQAKVAKEM---QGGDANASTAEAKEQVDARSVYVGNVDYACT 102
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQ+CGTVNRVTI TDKFGQPKG+AYVEFL+ EAVQEAL+LNESELHGRQ+KV+
Sbjct: 103 PEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEAVQEALNLNESELHGRQIKVS 162
Query: 121 VKRTNVPGMKQHRPRRPNPF--MVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 176
KRTNVPGMKQ PR NP+ Y+S GA P PYGYG++PRFR P RY PY+
Sbjct: 163 PKRTNVPGMKQRPPRGFNPYHGYPYRSYGAQYFP----PYGYGRVPRFRRPTRYRPYF 216
>gi|357138032|ref|XP_003570602.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 210
Score = 236 bits (601), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 122/178 (68%), Positives = 139/178 (78%), Gaps = 9/178 (5%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEMEEEA ALR M AKV EM Q A S+ +E+VD+RSV+VGNVDY+CT
Sbjct: 40 MKRRLKEMEEEAAALRDMQAKVAKEM---QGGDANASTAEAKEQVDARSVYVGNVDYACT 96
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQ+CGTVNRVTI TDKFGQPKG+AYVEFL+ EAVQEAL+LNESELHGRQ+KV+
Sbjct: 97 PEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEAVQEALNLNESELHGRQIKVS 156
Query: 121 VKRTNVPGMKQHRPRRPNPF--MVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 176
KRTNVPGMKQ PR NP+ Y+S GA P PYGYG++PRFR P RY PY+
Sbjct: 157 PKRTNVPGMKQRPPRGFNPYHGYPYRSYGAQYFP----PYGYGRVPRFRRPTRYRPYF 210
>gi|224287039|gb|ACN41220.1| unknown [Picea sitchensis]
Length = 201
Score = 235 bits (600), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 128/180 (71%), Positives = 141/180 (78%), Gaps = 12/180 (6%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEMEEEA ALR M AKV EM + QDPAA +S A +EE D+RS++VGNVDY+CT
Sbjct: 28 MKKRLKEMEEEAAALRDMQAKVEKEMGAVQDPAASAASQATKEEADTRSIYVGNVDYACT 87
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNRVTI TDKFGQPKGYAYVEFL++EAVQ A+ LNESELHGRQLKVT
Sbjct: 88 PEEVQQHFQSCGTVNRVTILTDKFGQPKGYAYVEFLEAEAVQNAILLNESELHGRQLKVT 147
Query: 121 VKRTNVPGMKQHRPRR-PNPFMVYQSRGAIIPPF----LYSPYGYGKIPRFRMPMRYSPY 175
KRTNVPGMKQ R RR P+M Y+ P+ YSPYGYGK PRFR MRY PY
Sbjct: 148 AKRTNVPGMKQFRGRRFSAPYMGYR-------PWRPPYPYSPYGYGKAPRFRRAMRYRPY 200
>gi|226529568|ref|NP_001148500.1| polyadenylate-binding protein 2 [Zea mays]
gi|195619834|gb|ACG31747.1| polyadenylate-binding protein 2 [Zea mays]
gi|413924473|gb|AFW64405.1| polyadenylate-binding protein 2 [Zea mays]
Length = 212
Score = 235 bits (599), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 121/176 (68%), Positives = 137/176 (77%), Gaps = 5/176 (2%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK +LKEMEEEA ALR M AKV EM DP+ S+ +E+VD+RSV+VGNVDY+CT
Sbjct: 42 MKRKLKEMEEEAAALRDMQAKVAKEMQGG-DPSI--STAEAKEQVDARSVYVGNVDYACT 98
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQ+CGTVNRVTI TDKFGQPKG+AYVEFL+ EAVQEAL+LNESELHGRQ+KV
Sbjct: 99 PEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEAVQEALNLNESELHGRQIKVA 158
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 176
KRTNVPGMKQ PR NP+ Y R P F PYGYG+ PRFR PMRY PY+
Sbjct: 159 PKRTNVPGMKQRPPRGYNPYHGYPYRSYGAPYF--PPYGYGRAPRFRRPMRYRPYF 212
>gi|116780872|gb|ABK21856.1| unknown [Picea sitchensis]
Length = 215
Score = 234 bits (598), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 128/180 (71%), Positives = 141/180 (78%), Gaps = 12/180 (6%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEMEEEA ALR M AKV EM + QDPAA +S A +EE D+RS++VGNVDY+CT
Sbjct: 42 MKKRLKEMEEEAAALRDMQAKVEKEMGAVQDPAASAASQATKEEADTRSIYVGNVDYACT 101
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNRVTI TDKFGQPKGYAYVEFL++EAVQ A+ LNESELHGRQLKVT
Sbjct: 102 PEEVQQHFQSCGTVNRVTILTDKFGQPKGYAYVEFLEAEAVQNAILLNESELHGRQLKVT 161
Query: 121 VKRTNVPGMKQHRPRR-PNPFMVYQSRGAIIPPF----LYSPYGYGKIPRFRMPMRYSPY 175
KRTNVPGMKQ R RR P+M Y+ P+ YSPYGYGK PRFR MRY PY
Sbjct: 162 AKRTNVPGMKQFRGRRFSAPYMGYR-------PWRPPYPYSPYGYGKAPRFRRAMRYRPY 214
>gi|413924475|gb|AFW64407.1| hypothetical protein ZEAMMB73_935050 [Zea mays]
Length = 171
Score = 234 bits (598), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 121/176 (68%), Positives = 137/176 (77%), Gaps = 5/176 (2%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK +LKEMEEEA ALR M AKV EM DP+ S+ +E+VD+RSV+VGNVDY+CT
Sbjct: 1 MKRKLKEMEEEAAALRDMQAKVAKEMQGG-DPSI--STAEAKEQVDARSVYVGNVDYACT 57
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQ+CGTVNRVTI TDKFGQPKG+AYVEFL+ EAVQEAL+LNESELHGRQ+KV
Sbjct: 58 PEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEAVQEALNLNESELHGRQIKVA 117
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 176
KRTNVPGMKQ PR NP+ Y R P F PYGYG+ PRFR PMRY PY+
Sbjct: 118 PKRTNVPGMKQRPPRGYNPYHGYPYRSYGAPYF--PPYGYGRAPRFRRPMRYRPYF 171
>gi|255647938|gb|ACU24426.1| unknown [Glycine max]
Length = 218
Score = 234 bits (598), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 118/166 (71%), Positives = 132/166 (79%), Gaps = 6/166 (3%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEMEEEA ALR+M AKV E+ S QDPA +S AN+EE D+RSVFVGNVDY+CT
Sbjct: 46 MKRRLKEMEEEAAALREMQAKVEKEIGSVQDPANAAASQANKEEADARSVFVGNVDYACT 105
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNRVTI TDKFGQPKG+AYVEF+++EAVQEAL LNESELHGRQLKV
Sbjct: 106 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVL 165
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRF 166
KRTNVPGMKQ+RP NP+M Y R Y+PY Y + RF
Sbjct: 166 PKRTNVPGMKQYRPSCFNPYMAYGFRRP------YTPYLYSLMGRF 205
>gi|388515309|gb|AFK45716.1| unknown [Lotus japonicus]
Length = 218
Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 119/177 (67%), Positives = 141/177 (79%), Gaps = 7/177 (3%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKE+EEEA+ALR+M AKV +M + QD A ++ A +EEVD RS++VGNVDY+CT
Sbjct: 47 MKKRLKEIEEEASALREMQAKVEKDMGAVQD-AGSSATQAEKEEVDGRSIYVGNVDYACT 105
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNRVTI TDKFGQPKG+AYVEF+++EAVQ A+ LNESELHGRQLKV+
Sbjct: 106 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEAEAVQNAVMLNESELHGRQLKVS 165
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIP--PFLYSPYGYGKIPRFRMPMRYSPY 175
KRTNVPGMKQ+ RRP F +SR +P PF Y PY YG+ PR+ PMRY PY
Sbjct: 166 AKRTNVPGMKQYFGRRPAGF---RSRRPFMPYAPF-YPPYAYGRFPRYGRPMRYRPY 218
>gi|18423239|ref|NP_568751.1| polyadenylate-binding protein 1 [Arabidopsis thaliana]
gi|15809838|gb|AAL06847.1| AT5g51120/MWD22_6 [Arabidopsis thaliana]
gi|15982733|gb|AAL09819.1| unknown protein [Arabidopsis thaliana]
gi|19310785|gb|AAL85123.1| unknown protein [Arabidopsis thaliana]
gi|21358850|gb|AAM47151.1| unknown protein [Arabidopsis thaliana]
gi|332008655|gb|AED96038.1| polyadenylate-binding protein 1 [Arabidopsis thaliana]
Length = 227
Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 117/175 (66%), Positives = 138/175 (78%), Gaps = 4/175 (2%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+KE+EEEA ALR+M AK +M + QDP+ GG S A +EEVDSRS++VGNVDY+CT
Sbjct: 57 MKKRIKEIEEEAGALREMQAKAEKDMGASQDPS-GGVSAAEKEEVDSRSIYVGNVDYACT 115
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNRVTI TDKFGQPKG+AYVEF++ EAVQ +L LNESELHGRQ+KV+
Sbjct: 116 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQNSLILNESELHGRQIKVS 175
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPY 175
KRTNVPGM+Q R R PF + +P Y PY YG++PRFR PMRY PY
Sbjct: 176 AKRTNVPGMRQFR-GRGRPFRPMRGFMPGVP--FYPPYAYGRVPRFRRPMRYRPY 227
>gi|21536704|gb|AAM61036.1| contains similarity to poly(A)-binding protein II [Arabidopsis
thaliana]
Length = 227
Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 117/175 (66%), Positives = 138/175 (78%), Gaps = 4/175 (2%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+KE+EEEA ALR+M AK +M + QDP+ GG S A +EEVDSRS++VGNVDY+CT
Sbjct: 57 MKKRIKEIEEEAGALREMQAKAEKDMGASQDPS-GGVSAAEKEEVDSRSIYVGNVDYACT 115
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNRVTI TDKFGQPKG+AYVEF++ EAVQ +L LNESELHGRQ+KV+
Sbjct: 116 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQNSLILNESELHGRQIKVS 175
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPY 175
KRTNVPGM+Q R R PF + +P Y PY YG++PRFR PMRY PY
Sbjct: 176 AKRTNVPGMRQFR-GRGRPFRPMRGFMPGVP--FYPPYAYGRVPRFRRPMRYRPY 227
>gi|225462878|ref|XP_002273112.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1 [Vitis
vinifera]
Length = 186
Score = 231 bits (589), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 122/175 (69%), Positives = 143/175 (81%), Gaps = 14/175 (8%)
Query: 4 RLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLA--NREEVDSRSVFVGNVDYSCTP 61
RL++M EE K N+M S QDPAA ++ A +REEVDSRSVFVGNVDYSCTP
Sbjct: 24 RLEQMMEEK-------PKAHNDMPSVQDPAAAAAAAAQASREEVDSRSVFVGNVDYSCTP 76
Query: 62 EEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 121
EEVQQHFQ+CGTVNRVTIR++K+GQPKGYAYVEFL++EAVQEAL LNESELHGRQLKV+
Sbjct: 77 EEVQQHFQACGTVNRVTIRSNKYGQPKGYAYVEFLETEAVQEALLLNESELHGRQLKVSA 136
Query: 122 KRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 176
KRTNVPG+KQ RPRR + ++SR +PP+L PYGYGK+PRFRMPMRY+PYY
Sbjct: 137 KRTNVPGLKQFRPRR----VGFRSRSTHMPPYL-CPYGYGKVPRFRMPMRYNPYY 186
>gi|296087478|emb|CBI34067.3| unnamed protein product [Vitis vinifera]
Length = 180
Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 122/175 (69%), Positives = 143/175 (81%), Gaps = 14/175 (8%)
Query: 4 RLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLA--NREEVDSRSVFVGNVDYSCTP 61
RL++M EE K N+M S QDPAA ++ A +REEVDSRSVFVGNVDYSCTP
Sbjct: 18 RLEQMMEEK-------PKAHNDMPSVQDPAAAAAAAAQASREEVDSRSVFVGNVDYSCTP 70
Query: 62 EEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 121
EEVQQHFQ+CGTVNRVTIR++K+GQPKGYAYVEFL++EAVQEAL LNESELHGRQLKV+
Sbjct: 71 EEVQQHFQACGTVNRVTIRSNKYGQPKGYAYVEFLETEAVQEALLLNESELHGRQLKVSA 130
Query: 122 KRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 176
KRTNVPG+KQ RPRR + ++SR +PP+L PYGYGK+PRFRMPMRY+PYY
Sbjct: 131 KRTNVPGLKQFRPRR----VGFRSRSTHMPPYL-CPYGYGKVPRFRMPMRYNPYY 180
>gi|225462880|ref|XP_002273141.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2 [Vitis
vinifera]
Length = 179
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 117/173 (67%), Positives = 139/173 (80%), Gaps = 17/173 (9%)
Query: 4 RLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEE 63
RL++M EE K N+M P+ ++ A+REEVDSRSVFVGNVDYSCTPEE
Sbjct: 24 RLEQMMEEK-------PKAHNDM-----PSVQAAAQASREEVDSRSVFVGNVDYSCTPEE 71
Query: 64 VQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKR 123
VQQHFQ+CGTVNRVTIR++K+GQPKGYAYVEFL++EAVQEAL LNESELHGRQLKV+ KR
Sbjct: 72 VQQHFQACGTVNRVTIRSNKYGQPKGYAYVEFLETEAVQEALLLNESELHGRQLKVSAKR 131
Query: 124 TNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 176
TNVPG+KQ RPRR + ++SR +PP+L PYGYGK+PRFRMPMRY+PYY
Sbjct: 132 TNVPGLKQFRPRR----VGFRSRSTHMPPYL-CPYGYGKVPRFRMPMRYNPYY 179
>gi|224114678|ref|XP_002339510.1| predicted protein [Populus trichocarpa]
gi|222832586|gb|EEE71063.1| predicted protein [Populus trichocarpa]
Length = 212
Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 111/161 (68%), Positives = 130/161 (80%), Gaps = 1/161 (0%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKE+EEEA ALR+M AKV EM + QD ++ A +EEVDSRS++VGNVDYSCT
Sbjct: 53 MKKRLKEIEEEAGALREMQAKVEKEMGAVQDSPGASATQAEKEEVDSRSIYVGNVDYSCT 112
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNRVTI TDKFGQPKG+AYVEF++ +A+Q AL LNESELHGRQLKV+
Sbjct: 113 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVDAIQNALLLNESELHGRQLKVS 172
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYG 161
KRTNVPGMKQ R RRP+P+ + +SR +P Y YGYG
Sbjct: 173 AKRTNVPGMKQFRGRRPSPYGL-RSRRPFMPAPFYPAYGYG 212
>gi|388498186|gb|AFK37159.1| unknown [Lotus japonicus]
Length = 217
Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 118/177 (66%), Positives = 139/177 (78%), Gaps = 8/177 (4%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKE+EEEA+ALR+M AKV +M + QD A ++ A +EEVD RS++VGNVDY+CT
Sbjct: 47 MKKRLKEIEEEASALREMQAKVEKDMGAVQD-AGSSATQAEKEEVDGRSIYVGNVDYACT 105
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNRVTI TDKFGQPKG+AYVEF+++EAVQ A+ LNE ELHGRQLKV+
Sbjct: 106 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEAEAVQNAVMLNELELHGRQLKVS 165
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIP--PFLYSPYGYGKIPRFRMPMRYSPY 175
KRTNVPGMKQ+ RRP F +SR +P PF Y PY YG P +R PMRY PY
Sbjct: 166 AKRTNVPGMKQYFGRRPAGF---RSRRPFMPYAPF-YPPYAYGS-PWYRRPMRYRPY 217
>gi|302814589|ref|XP_002988978.1| hypothetical protein SELMODRAFT_159820 [Selaginella moellendorffii]
gi|300143315|gb|EFJ10007.1| hypothetical protein SELMODRAFT_159820 [Selaginella moellendorffii]
Length = 178
Score = 225 bits (573), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 124/179 (69%), Positives = 139/179 (77%), Gaps = 4/179 (2%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEME+EA ALR M AKV EM + QDPAA + A++EE D+RSV+VGNVDYSCT
Sbjct: 1 MKKRLKEMEDEAAALRDMQAKVEKEMGAGQDPAAA-AQQASKEEADARSVYVGNVDYSCT 59
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNRVTI TDKFGQPKG+AYVEFL+ EAVQ AL LNESELHGR +KV
Sbjct: 60 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQNALILNESELHGRPIKVA 119
Query: 121 VKRTNVPGMKQHRPRR--PNPFMVY-QSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 176
KRTNVPG+KQHR R P+M Y R + P PYG+GK+PRFR PMRY PYY
Sbjct: 120 AKRTNVPGLKQHRGRGGFGAPYMPYFPRRPYMPYPSYPYPYGFGKVPRFRRPMRYRPYY 178
>gi|302786636|ref|XP_002975089.1| hypothetical protein SELMODRAFT_102545 [Selaginella moellendorffii]
gi|300157248|gb|EFJ23874.1| hypothetical protein SELMODRAFT_102545 [Selaginella moellendorffii]
Length = 224
Score = 222 bits (566), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 122/179 (68%), Positives = 138/179 (77%), Gaps = 4/179 (2%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEME+EA ALR M AKV EM + QDPAA + A++EE D+RSV+VGNVDYSCT
Sbjct: 47 MKKRLKEMEDEAAALRDMQAKVEKEMGAGQDPAAA-AQQASKEEADARSVYVGNVDYSCT 105
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNRVTI TDKFGQPKG+AYVEFL+ EAVQ AL LNESELHGR +K
Sbjct: 106 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQNALILNESELHGRPIKAR 165
Query: 121 VKRTNVPGMKQHRPRR--PNPFMVY-QSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 176
+ RTNVPG+KQHR R P+M Y R + P PYG+GK+PRFR PMRY PYY
Sbjct: 166 ISRTNVPGLKQHRGRGGFGAPYMPYFPRRPYMPYPSYPYPYGFGKVPRFRRPMRYRPYY 224
>gi|388491050|gb|AFK33591.1| unknown [Medicago truncatula]
Length = 179
Score = 218 bits (555), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 108/161 (67%), Positives = 129/161 (80%), Gaps = 4/161 (2%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKE+EEEA+ALR+M AKV EM + QDPA S A +EEVD+RS++VGNVDY+CT
Sbjct: 23 MKKRLKEIEEEASALREMQAKVEKEMGAVQDPAGSSVSQAEKEEVDARSIYVGNVDYACT 82
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNRVTI TDKFGQPKG+AYVEF++++AVQ AL LNE+ELHGRQLKV+
Sbjct: 83 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEADAVQNALILNETELHGRQLKVS 142
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYG 161
KRTNVPG+KQ+ RRP F + R +P + PY YG
Sbjct: 143 AKRTNVPGLKQY-GRRPAGF---RGRRPFMPAPSFPPYAYG 179
>gi|255539947|ref|XP_002511038.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223550153|gb|EEF51640.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 234
Score = 218 bits (555), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 111/177 (62%), Positives = 134/177 (75%), Gaps = 16/177 (9%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQD----------------PAAGGSSLANREE 44
MK RLKE+EEEA ALR+M AKV EM + Q ++G ++ A +EE
Sbjct: 58 MKKRLKEIEEEAGALREMQAKVEKEMGAVQGISHSLPLSIYIVLWSYSSSGSATQAEKEE 117
Query: 45 VDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEA 104
VDSRS++VGNVDY+CTPEEVQQHFQSCGTVNRVTI TDKFGQPKG+AYVEF++ +AVQ A
Sbjct: 118 VDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVDAVQNA 177
Query: 105 LHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYG 161
L LNESELHGRQLKV+ KRTN+PGMKQ+R RRPNP+ ++SR +P + PYGYG
Sbjct: 178 LLLNESELHGRQLKVSAKRTNIPGMKQYRGRRPNPYSGFRSRRPFMPAPFFPPYGYG 234
>gi|388515797|gb|AFK45960.1| unknown [Lotus japonicus]
Length = 171
Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/163 (68%), Positives = 131/163 (80%), Gaps = 7/163 (4%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKE+EEEA+ALR+M AKV +M + QD A ++ A +EEVD RS++VGNVDY+CT
Sbjct: 1 MKKRLKEIEEEASALREMQAKVEKDMGAVQD-AGSSATQAEKEEVDGRSIYVGNVDYACT 59
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNRVTI TDKFGQPKG+AYVEF+++EAVQ A+ LNESELHGRQLKV+
Sbjct: 60 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEAEAVQNAVMLNESELHGRQLKVS 119
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIP--PFLYSPYGYG 161
KRTNVPGMKQ+ RRP F +SR +P PF Y PY YG
Sbjct: 120 AKRTNVPGMKQYFGRRPAGF---RSRRPFMPYAPF-YPPYAYG 158
>gi|351725805|ref|NP_001237617.1| uncharacterized protein LOC100527545 [Glycine max]
gi|255632582|gb|ACU16641.1| unknown [Glycine max]
Length = 214
Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 108/163 (66%), Positives = 131/163 (80%), Gaps = 3/163 (1%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKE+EEEA+ALR+M AKV EM + +D + ++ REEVD+RS++VGNVDY+CT
Sbjct: 43 MKKRLKEIEEEASALREMQAKVEKEMGAVRDSSGTSATQVEREEVDARSIYVGNVDYACT 102
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNRVTI TDKFGQPKG+AYVEF++ +AVQ AL LNESELHGRQLKV+
Sbjct: 103 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNESELHGRQLKVS 162
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKI 163
KRTNVPGMKQ+ RRP F +SR +P + PYGYG++
Sbjct: 163 AKRTNVPGMKQYFGRRPAGF---RSRRPFMPAPFFPPYGYGRV 202
>gi|194706900|gb|ACF87534.1| unknown [Zea mays]
gi|195622774|gb|ACG33217.1| polyadenylate-binding protein 2 [Zea mays]
Length = 203
Score = 215 bits (548), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 113/161 (70%), Positives = 126/161 (78%), Gaps = 7/161 (4%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEMEEEA ALR+M AKV EM DP A S N+EE+DSRSVF+GNVDY+CT
Sbjct: 37 MKRRLKEMEEEAAALREMQAKVAKEMQGV-DPNATTSE--NKEEMDSRSVFIGNVDYACT 93
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHF SCGTVNRVTI TDKFGQPKG+AYVEF++ EAVQEA+ LNESELHGRQLKV
Sbjct: 94 PEEVQQHFNSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQEAIKLNESELHGRQLKVA 153
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYG 161
KRTNVPGMKQ R R NP+ + + P+ YSPYGYG
Sbjct: 154 PKRTNVPGMKQPRGRGFNPYHGH----PYMRPYGYSPYGYG 190
>gi|242092470|ref|XP_002436725.1| hypothetical protein SORBIDRAFT_10g007620 [Sorghum bicolor]
gi|241914948|gb|EER88092.1| hypothetical protein SORBIDRAFT_10g007620 [Sorghum bicolor]
Length = 203
Score = 215 bits (548), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 114/161 (70%), Positives = 126/161 (78%), Gaps = 7/161 (4%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEMEEEA ALR+M AKV EM DP A S N+EE+DSRSVFVGNVDY+CT
Sbjct: 37 MKRRLKEMEEEAAALREMQAKVAKEMQGV-DPNATTSE--NKEEMDSRSVFVGNVDYACT 93
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHF SCGTVNRVTI TDKFGQPKG+AYVEF++ EAVQEA+ LNESELHGRQLKV
Sbjct: 94 PEEVQQHFNSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQEAVKLNESELHGRQLKVA 153
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYG 161
KRTNVPGMKQ R R NP+ + + P+ YSPYGYG
Sbjct: 154 PKRTNVPGMKQPRGRGFNPYHGH----PYMRPYGYSPYGYG 190
>gi|217074200|gb|ACJ85460.1| unknown [Medicago truncatula]
gi|388522377|gb|AFK49250.1| unknown [Medicago truncatula]
Length = 217
Score = 215 bits (547), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 108/163 (66%), Positives = 131/163 (80%), Gaps = 4/163 (2%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKE+EEEA+ALR+M AKV EM + QDPA S A +EEVD+RS++VGNVDY+CT
Sbjct: 47 MKKRLKEIEEEASALREMQAKVEKEMGAVQDPAGSSVSQAEKEEVDARSIYVGNVDYACT 106
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNRVTI TDKFGQPKG+AYVEF++++AVQ AL LNE+ELHGRQLKV+
Sbjct: 107 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEADAVQNALILNETELHGRQLKVS 166
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKI 163
KRTNVPG+KQ+ RRP F + R +P + PY YG++
Sbjct: 167 AKRTNVPGLKQY-GRRPAGF---RGRRPFMPAPFFPPYAYGRV 205
>gi|357440891|ref|XP_003590723.1| Polyadenylate-binding protein [Medicago truncatula]
gi|217072228|gb|ACJ84474.1| unknown [Medicago truncatula]
gi|355479771|gb|AES60974.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 187
Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 102/140 (72%), Positives = 120/140 (85%), Gaps = 1/140 (0%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKE+EEEA+ALR+M AKV EM + QDPA S A +EEVD+RS++VGNVDY+CT
Sbjct: 47 MKKRLKEIEEEASALREMQAKVEKEMGAVQDPAGSSVSQAEKEEVDARSIYVGNVDYACT 106
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNRVTI TDKFGQPKG+AYVEF++++AVQ AL LNE+ELHGRQLKV+
Sbjct: 107 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEADAVQNALILNETELHGRQLKVS 166
Query: 121 VKRTNVPGMKQHRPRRPNPF 140
KRTNVPG+KQ+ RRP F
Sbjct: 167 AKRTNVPGLKQY-GRRPAGF 185
>gi|255633822|gb|ACU17272.1| unknown [Glycine max]
Length = 183
Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 101/140 (72%), Positives = 119/140 (85%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKE+EEEA+ALR+M AKV EM + QD + ++ A +EEVD+RS++VGNVDY+CT
Sbjct: 43 MKKRLKEIEEEASALREMQAKVEKEMGAVQDSSGTSATQAEKEEVDARSIYVGNVDYACT 102
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNRVTI TDKFGQPKG+AYVEF++ +AVQ AL LNESELHGRQLKV+
Sbjct: 103 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNESELHGRQLKVS 162
Query: 121 VKRTNVPGMKQHRPRRPNPF 140
KRTNVPGMKQ+ RRP F
Sbjct: 163 AKRTNVPGMKQYFGRRPAGF 182
>gi|8843848|dbj|BAA97374.1| unnamed protein product [Arabidopsis thaliana]
Length = 267
Score = 211 bits (537), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 109/162 (67%), Positives = 127/162 (78%), Gaps = 6/162 (3%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+KE+EEEA ALR+M AK +M + QDP+ GG S A +EEVDSRS++VGNVDY+CT
Sbjct: 57 MKKRIKEIEEEAGALREMQAKAEKDMGASQDPS-GGVSAAEKEEVDSRSIYVGNVDYACT 115
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNRVTI TDKFGQPKG+AYVEF++ EAVQ +L LNESELHGRQ+KV+
Sbjct: 116 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQNSLILNESELHGRQIKVS 175
Query: 121 VKRTNVPGMKQHRPR-RPNPFMVYQSRGAIIPPFLYSPYGYG 161
KRTNVPGM+Q R R RP M RG + Y PY YG
Sbjct: 176 AKRTNVPGMRQFRGRGRPFRPM----RGFMPGVPFYPPYAYG 213
>gi|334188309|ref|NP_001190511.1| polyadenylate-binding protein 1 [Arabidopsis thaliana]
gi|332008656|gb|AED96039.1| polyadenylate-binding protein 1 [Arabidopsis thaliana]
Length = 265
Score = 211 bits (537), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 114/212 (53%), Positives = 135/212 (63%), Gaps = 40/212 (18%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQ------------------------------ 30
MK R+KE+EEEA ALR+M AK +M + Q
Sbjct: 57 MKKRIKEIEEEAGALREMQAKAEKDMGASQGLKLVLLIMILLWVYILESFSESMNLSRNL 116
Query: 31 -------DPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK 83
+ G S A +EEVDSRS++VGNVDY+CTPEEVQQHFQSCGTVNRVTI TDK
Sbjct: 117 LEFEYEKEIINSGVSAAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK 176
Query: 84 FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVY 143
FGQPKG+AYVEF++ EAVQ +L LNESELHGRQ+KV+ KRTNVPGM+Q R R PF
Sbjct: 177 FGQPKGFAYVEFVEVEAVQNSLILNESELHGRQIKVSAKRTNVPGMRQFRG-RGRPFRPM 235
Query: 144 QSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPY 175
+ +P Y PY YG++PRFR PMRY PY
Sbjct: 236 RGFMPGVP--FYPPYAYGRVPRFRRPMRYRPY 265
>gi|168028169|ref|XP_001766601.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682246|gb|EDQ68666.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 238
Score = 209 bits (533), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 108/161 (67%), Positives = 119/161 (73%), Gaps = 2/161 (1%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEMEEEA ALR M AKV EM Q A ANREE D+RSVFVGNVDY+CT
Sbjct: 51 MKKRLKEMEEEAAALRDMQAKVEKEMGGSQ--ALTNGDQANREEADARSVFVGNVDYACT 108
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHFQSCGTVNRVTI TDKFG PKGYAYVEFL+ EAVQ A+ L+ESELH R +KVT
Sbjct: 109 PEEVQQHFQSCGTVNRVTILTDKFGSPKGYAYVEFLEVEAVQNAILLSESELHNRPIKVT 168
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYG 161
KRTNVPGMK +R R P+ Y+ R P+ Y+ YG G
Sbjct: 169 AKRTNVPGMKGYRGRPYAPYYGYRPRRPFSAPYGYASYGSG 209
>gi|343172515|gb|AEL98961.1| polyadenylate-binding protein, partial [Silene latifolia]
Length = 213
Score = 209 bits (533), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 109/176 (61%), Positives = 132/176 (75%), Gaps = 3/176 (1%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEMEEEA ALR+M AKV EM + QDPA+ + LAN+EEVD+RS + +
Sbjct: 40 MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPASA-ADLANKEEVDARSFLLAMLIMLAP 98
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
++ FQSCG VNRVTI TDKFGQPKG+AYVEF++ EAVQ+AL LNESELHGRQLKV+
Sbjct: 99 RKKSSNIFQSCGIVNRVTILTDKFGQPKGFAYVEFVEQEAVQQALLLNESELHGRQLKVS 158
Query: 121 VKRTNVPGMKQHRPRRP-NPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPY 175
KRTNVPG+KQ R RR NP+M ++ R P+ ++PYGYGK+PRFR P RY PY
Sbjct: 159 PKRTNVPGLKQFRGRRGFNPYMPFRPRRPFPSPY-FNPYGYGKVPRFRRPNRYMPY 213
>gi|226532872|ref|NP_001149957.1| polyadenylate-binding protein 2 [Zea mays]
gi|195635741|gb|ACG37339.1| polyadenylate-binding protein 2 [Zea mays]
Length = 199
Score = 209 bits (531), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 105/140 (75%), Positives = 116/140 (82%), Gaps = 5/140 (3%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEMEEEA ALR+M AKV +M QDP A S N+EE+DSRSVFVGNVDY+CT
Sbjct: 37 MKRRLKEMEEEAAALREMQAKVAKDM---QDPNATTSE--NKEEMDSRSVFVGNVDYACT 91
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHF SCGTVNRVTI TDKFGQPKG+AYVEF++ EAVQEA+ LNESELHGRQLKV
Sbjct: 92 PEEVQQHFNSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQEAIKLNESELHGRQLKVA 151
Query: 121 VKRTNVPGMKQHRPRRPNPF 140
KRTN+PGMKQ R R NP+
Sbjct: 152 PKRTNIPGMKQLRGRGFNPY 171
>gi|226509296|ref|NP_001152340.1| polyadenylate-binding protein 2 [Zea mays]
gi|195655291|gb|ACG47113.1| polyadenylate-binding protein 2 [Zea mays]
Length = 203
Score = 208 bits (530), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 109/161 (67%), Positives = 124/161 (77%), Gaps = 7/161 (4%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEMEEEA ALR+M AKV EM DP A ++ N+EE+DSRSVF+GNVDY+CT
Sbjct: 37 MKRRLKEMEEEAAALREMQAKVAKEMQGV-DPNA--TTSENKEEMDSRSVFIGNVDYACT 93
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
P V QHF SCGTVNRVTI TDKFGQPKG+AYVEF++ EAVQEA+ LNESELHGRQLKV
Sbjct: 94 PXXVXQHFNSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQEAIKLNESELHGRQLKVA 153
Query: 121 VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYG 161
KRTNVPGMKQ R R NP+ + + P+ YSPYGYG
Sbjct: 154 PKRTNVPGMKQPRGRGFNPYHGH----PYMRPYGYSPYGYG 190
>gi|238006378|gb|ACR34224.1| unknown [Zea mays]
gi|413952637|gb|AFW85286.1| polyadenylate-binding protein 2 [Zea mays]
Length = 199
Score = 208 bits (529), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 106/140 (75%), Positives = 116/140 (82%), Gaps = 5/140 (3%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEMEEEA ALR+M AKV +M QDP A S N+EE+DSRSVFVGNVDY+CT
Sbjct: 37 MKRRLKEMEEEAAALREMQAKVAKDM---QDPNATTSE--NKEEMDSRSVFVGNVDYACT 91
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHF SCGTVNRVTI TDKFGQPKG+AYVEF++ EAVQEA+ LNESELHGRQLKV
Sbjct: 92 PEEVQQHFNSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQEAIKLNESELHGRQLKVA 151
Query: 121 VKRTNVPGMKQHRPRRPNPF 140
KRTNVPGMKQ R R NP+
Sbjct: 152 PKRTNVPGMKQPRGRGFNPY 171
>gi|167999063|ref|XP_001752237.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696632|gb|EDQ82970.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 156
Score = 208 bits (529), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 112/161 (69%), Positives = 121/161 (75%), Gaps = 6/161 (3%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEMEEEA ALR M AKV EM QD A + ANREE D+RSVFVGNVDYSCT
Sbjct: 1 MKKRLKEMEEEAAALRDMQAKVEKEMGGSQDSAITSGAQANREEADARSVFVGNVDYSCT 60
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLK-V 119
PEEVQQHFQSCGTVNRVTI TDKFGQPKG+AYVEFL+ EAVQ A+ L+ESELH R LK V
Sbjct: 61 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQNAILLSESELHNRPLKVV 120
Query: 120 TVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGY 160
T KRTNVPGMK R R P+ Y+ R PF +PYGY
Sbjct: 121 TSKRTNVPGMKGFRGRPYAPYYGYRPR----RPF-SAPYGY 156
>gi|413924471|gb|AFW64403.1| polyadenylate-binding protein 2 [Zea mays]
Length = 194
Score = 207 bits (528), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 107/173 (61%), Positives = 128/173 (73%), Gaps = 13/173 (7%)
Query: 4 RLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEE 63
+L+E++E L++M DP+ S+ +E+VD+RSV+VGNVDY+CTPEE
Sbjct: 35 KLQELDEMKRKLKEMEGG---------DPSI--STAEAKEQVDARSVYVGNVDYACTPEE 83
Query: 64 VQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKR 123
VQQHFQ+CGTVNRVTI TDKFGQPKG+AYVEFL+ EAVQEAL+LNESELHGRQ+KV KR
Sbjct: 84 VQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEAVQEALNLNESELHGRQIKVAPKR 143
Query: 124 TNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 176
TNVPGMKQ PR NP+ Y R P F PYGYG+ PRFR PMRY PY+
Sbjct: 144 TNVPGMKQRPPRGYNPYHGYPYRSYGAPYF--PPYGYGRAPRFRRPMRYRPYF 194
>gi|195637520|gb|ACG38228.1| polyadenylate-binding protein 2 [Zea mays]
Length = 194
Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 107/173 (61%), Positives = 128/173 (73%), Gaps = 13/173 (7%)
Query: 4 RLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEE 63
+L+E++E L++M DP+ S+ +E+VD+RSV+VGNVDY+CTPEE
Sbjct: 35 KLQELDEMKRKLKEMQGC---------DPSI--STAEAKEQVDARSVYVGNVDYACTPEE 83
Query: 64 VQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKR 123
VQQHFQ+CGTVNRVTI TDKFGQPKG+AYVEFL+ EAVQEAL+LNESELHGRQ+KV KR
Sbjct: 84 VQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEAVQEALNLNESELHGRQIKVAPKR 143
Query: 124 TNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 176
TNVPGMKQ PR NP+ Y R P F PYGYG+ PRFR PMRY PY+
Sbjct: 144 TNVPGMKQRPPRGYNPYHGYPYRSYGAPYF--PPYGYGRAPRFRRPMRYRPYF 194
>gi|296087007|emb|CBI33270.3| unnamed protein product [Vitis vinifera]
Length = 145
Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 98/122 (80%), Positives = 106/122 (86%)
Query: 55 VDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHG 114
VDY+CTPEEVQQHFQSCGTVNRVTI TDK+GQPKG+AYVEFL+ EAVQEAL LNESELHG
Sbjct: 24 VDYACTPEEVQQHFQSCGTVNRVTILTDKYGQPKGFAYVEFLEVEAVQEALLLNESELHG 83
Query: 115 RQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSP 174
RQLKV KRTNVPGMKQ RPRR NP+M Y+ R +PP+ YSPYGYGK PRFR PMRY P
Sbjct: 84 RQLKVLAKRTNVPGMKQFRPRRFNPYMGYRFRRPYVPPYFYSPYGYGKAPRFRRPMRYMP 143
Query: 175 YY 176
YY
Sbjct: 144 YY 145
>gi|359497541|ref|XP_003635560.1| PREDICTED: polyadenylate-binding protein 2-like, partial [Vitis
vinifera]
Length = 130
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/122 (80%), Positives = 106/122 (86%)
Query: 55 VDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHG 114
VDY+CTPEEVQQHFQSCGTVNRVTI TDK+GQPKG+AYVEFL+ EAVQEAL LNESELHG
Sbjct: 9 VDYACTPEEVQQHFQSCGTVNRVTILTDKYGQPKGFAYVEFLEVEAVQEALLLNESELHG 68
Query: 115 RQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSP 174
RQLKV KRTNVPGMKQ RPRR NP+M Y+ R +PP+ YSPYGYGK PRFR PMRY P
Sbjct: 69 RQLKVLAKRTNVPGMKQFRPRRFNPYMGYRFRRPYVPPYFYSPYGYGKAPRFRRPMRYMP 128
Query: 175 YY 176
YY
Sbjct: 129 YY 130
>gi|115467128|ref|NP_001057163.1| Os06g0219600 [Oryza sativa Japonica Group]
gi|51535367|dbj|BAD37238.1| putative poly(A) binding protein II [Oryza sativa Japonica Group]
gi|113595203|dbj|BAF19077.1| Os06g0219600 [Oryza sativa Japonica Group]
gi|215704439|dbj|BAG93873.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765746|dbj|BAG87443.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635211|gb|EEE65343.1| hypothetical protein OsJ_20615 [Oryza sativa Japonica Group]
Length = 204
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 113/164 (68%), Positives = 128/164 (78%), Gaps = 12/164 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEMEEEA ALR+M KV EM DP A SS ++EE+D+RSV+VGNVDY+CT
Sbjct: 38 MKRRLKEMEEEANALREMQTKVAKEMQG-LDPNA--SSSESKEEMDARSVYVGNVDYACT 94
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHF SCGTVNRVTI TDKFGQPKG+AYVEFL+ EAVQEA+ LNESELHGRQ+KV
Sbjct: 95 PEEVQQHFNSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQEAVKLNESELHGRQIKVA 154
Query: 121 VKRTNVPGMKQHRPRR---PNPFMVYQSRGAIIPPFLYSPYGYG 161
KRTNVPGMKQ R R +P+M + GA PF Y+PYGYG
Sbjct: 155 PKRTNVPGMKQPRGGRGFGGHPYM--RPYGA---PF-YNPYGYG 192
>gi|388491820|gb|AFK33976.1| unknown [Medicago truncatula]
Length = 170
Score = 202 bits (514), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 95/123 (77%), Positives = 106/123 (86%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEME+EA AL++M AKV EM S QDPA +S NREEVD+RS+FVGNVDY+CT
Sbjct: 21 MKKRLKEMEDEAAALKEMQAKVEKEMGSVQDPANASASQINREEVDARSIFVGNVDYACT 80
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PE+VQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEF++ EAVQEAL LNESELHGRQLKV
Sbjct: 81 PEDVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFVEVEAVQEALLLNESELHGRQLKVI 140
Query: 121 VKR 123
+
Sbjct: 141 TTK 143
>gi|334188311|ref|NP_001190512.1| polyadenylate-binding protein 1 [Arabidopsis thaliana]
gi|332008657|gb|AED96040.1| polyadenylate-binding protein 1 [Arabidopsis thaliana]
Length = 142
Score = 198 bits (503), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 98/142 (69%), Positives = 113/142 (79%), Gaps = 3/142 (2%)
Query: 34 AGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYV 93
GG S A +EEVDSRS++VGNVDY+CTPEEVQQHFQSCGTVNRVTI TDKFGQPKG+AYV
Sbjct: 4 GGGVSAAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYV 63
Query: 94 EFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPF 153
EF++ EAVQ +L LNESELHGRQ+KV+ KRTNVPGM+Q R R PF + +P
Sbjct: 64 EFVEVEAVQNSLILNESELHGRQIKVSAKRTNVPGMRQFR-GRGRPFRPMRGFMPGVP-- 120
Query: 154 LYSPYGYGKIPRFRMPMRYSPY 175
Y PY YG++PRFR PMRY PY
Sbjct: 121 FYPPYAYGRVPRFRRPMRYRPY 142
>gi|357124786|ref|XP_003564078.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 209
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 107/163 (65%), Positives = 126/163 (77%), Gaps = 6/163 (3%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RLKEMEEEA ALR+M AKV EM DP A ++ +EE+DSRSVFVGNVDY+CT
Sbjct: 38 MKRRLKEMEEEAAALREMQAKVAKEMQGG-DPNA--TTSEAKEEMDSRSVFVGNVDYACT 94
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEEVQQHF SCGTVNRVTI TDKFGQPKG+AYVEF+++EA+QEA+ L+ESELHGRQ+KV
Sbjct: 95 PEEVQQHFNSCGTVNRVTILTDKFGQPKGFAYVEFVEAEAIQEAVKLSESELHGRQIKVA 154
Query: 121 VKRTNVPGMKQHRPRRP-NPFMVYQSRGAIIPPFLYSPY-GYG 161
KRTNVPG+KQ R R NP+ + PF ++PY GYG
Sbjct: 155 PKRTNVPGLKQPRGGRGYNPYGGHPYMRPYGAPF-FNPYGGYG 196
>gi|334187575|ref|NP_001190273.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332004147|gb|AED91530.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 128
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/122 (75%), Positives = 103/122 (84%)
Query: 54 NVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELH 113
+VDY+CTPEEVQ HFQ+CGTVNRVTI DKFGQPKG+AYVEF++ EAVQEAL LNESELH
Sbjct: 6 HVDYACTPEEVQLHFQTCGTVNRVTILMDKFGQPKGFAYVEFVEVEAVQEALQLNESELH 65
Query: 114 GRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYS 173
GRQLKV+ KRTNVPGMKQ+ P R NP M Y+ R +PP+ YSPYGYGK PRFR PMRY
Sbjct: 66 GRQLKVSPKRTNVPGMKQYHPGRFNPSMGYRFRRPFVPPYFYSPYGYGKAPRFRRPMRYM 125
Query: 174 PY 175
PY
Sbjct: 126 PY 127
>gi|326512910|dbj|BAK03362.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 131
Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 89/125 (71%), Positives = 101/125 (80%), Gaps = 2/125 (1%)
Query: 52 VGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESE 111
V VDY+CTPEEVQQHFQ+CGTVNRVTI TDKFGQPKG+AYVEFL+ EAVQEAL+LNESE
Sbjct: 9 VLQVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEAVQEALNLNESE 68
Query: 112 LHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMR 171
LHGRQ+KV+ KRTNVPGMKQ PR +P+ Y R P F PYGYG++PRFR P R
Sbjct: 69 LHGRQIKVSPKRTNVPGMKQRPPRGFSPYHAYPYRSYGAPYF--PPYGYGRVPRFRRPTR 126
Query: 172 YSPYY 176
Y PY+
Sbjct: 127 YRPYF 131
>gi|413936733|gb|AFW71284.1| hypothetical protein ZEAMMB73_459562 [Zea mays]
Length = 228
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/109 (76%), Positives = 93/109 (85%)
Query: 35 GGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVE 94
++ N+EE+DSRSVFVGNVDY+CTPEEVQQHF SCGTVNRVTI TDKFGQPKG+AYVE
Sbjct: 110 NATTSENKEEMDSRSVFVGNVDYACTPEEVQQHFNSCGTVNRVTILTDKFGQPKGFAYVE 169
Query: 95 FLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVY 143
F++ EAVQEA+ LNESELHGRQLKV KRTNVPGMKQ R R NP+ Y
Sbjct: 170 FVEVEAVQEAIKLNESELHGRQLKVAPKRTNVPGMKQPRGRGFNPYRPY 218
>gi|218197814|gb|EEC80241.1| hypothetical protein OsI_22184 [Oryza sativa Indica Group]
Length = 230
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/187 (56%), Positives = 119/187 (63%), Gaps = 32/187 (17%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEM--------ASKQDPAAGGSSLAN----------- 41
MK RLKEMEEEA ALR+M KV EM S + A L N
Sbjct: 38 MKRRLKEMEEEANALREMQTKVAKEMQGCNLLVLISSLNLADCVDVLQNVISFHQSVNPS 97
Query: 42 REEVDSRS----VFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQ 97
+V RS + VDY+CTPEEVQQHF SCGTVNRVTI TDKFGQPKG+AYVEFL+
Sbjct: 98 TNDVSLRSWHRVMIAQRVDYACTPEEVQQHFNSCGTVNRVTILTDKFGQPKGFAYVEFLE 157
Query: 98 SEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRR---PNPFMVYQSRGAIIPPFL 154
EAVQEA+ LNESELHGRQ+KV KRTNVPGMKQ R R +P+M + GA PF
Sbjct: 158 VEAVQEAVKLNESELHGRQIKVAPKRTNVPGMKQPRGGRGFGGHPYM--RPYGA---PF- 211
Query: 155 YSPYGYG 161
Y+PYGYG
Sbjct: 212 YNPYGYG 218
>gi|414868203|tpg|DAA46760.1| TPA: hypothetical protein ZEAMMB73_590191 [Zea mays]
Length = 306
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 84/119 (70%), Positives = 96/119 (80%), Gaps = 7/119 (5%)
Query: 28 SKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQP 87
S ++P A S N+EE+DSR VFVGNVDY+CTPEEVQQHF SCG VNRVTI TDKFGQP
Sbjct: 183 SNRNPNATTSE--NKEEMDSRLVFVGNVDYACTPEEVQQHFNSCGIVNRVTILTDKFGQP 240
Query: 88 KGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPR-----RPNPFM 141
KG+AYVEF++ EAVQEA+ LNESELHGRQLKV +KRTN+PGMKQ R R RP F+
Sbjct: 241 KGFAYVEFVEVEAVQEAIKLNESELHGRQLKVALKRTNIPGMKQPRGRGFNQYRPYAFL 299
>gi|414868204|tpg|DAA46761.1| TPA: hypothetical protein ZEAMMB73_590191 [Zea mays]
Length = 261
Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 84/119 (70%), Positives = 96/119 (80%), Gaps = 7/119 (5%)
Query: 28 SKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQP 87
S ++P A S N+EE+DSR VFVGNVDY+CTPEEVQQHF SCG VNRVTI TDKFGQP
Sbjct: 138 SNRNPNATTSE--NKEEMDSRLVFVGNVDYACTPEEVQQHFNSCGIVNRVTILTDKFGQP 195
Query: 88 KGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPR-----RPNPFM 141
KG+AYVEF++ EAVQEA+ LNESELHGRQLKV +KRTN+PGMKQ R R RP F+
Sbjct: 196 KGFAYVEFVEVEAVQEAIKLNESELHGRQLKVALKRTNIPGMKQPRGRGFNQYRPYAFL 254
>gi|242035047|ref|XP_002464918.1| hypothetical protein SORBIDRAFT_01g028780 [Sorghum bicolor]
gi|241918772|gb|EER91916.1| hypothetical protein SORBIDRAFT_01g028780 [Sorghum bicolor]
Length = 209
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/183 (52%), Positives = 120/183 (65%), Gaps = 23/183 (12%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMA-----SKQDPAAGGSSLANREEVDSRSVFVGNV 55
+ R +E+EE LR++ K+ E+ ++ A ++ ++ EVD RS++VGNV
Sbjct: 43 LYTRDQEIEEMRRRLRELE-KLEFEIPPAPSHEEESETAVAATTVDKAEVDVRSIYVGNV 101
Query: 56 DYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGR 115
DY+C+PEEVQQHFQ CGT+NRVTI TD FGQPKG+AYVEF + EAVQ AL LNE+ELHGR
Sbjct: 102 DYACSPEEVQQHFQFCGTINRVTILTDSFGQPKGFAYVEFDEVEAVQNALLLNETELHGR 161
Query: 116 QLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFR--MPMRYS 173
LKV KRTN+PGMKQ R R VY PF S YGK+PRFR + YS
Sbjct: 162 PLKVCPKRTNIPGMKQSRGRHS----VY--------PFYPS---YGKVPRFRRFLGYSYS 206
Query: 174 PYY 176
PYY
Sbjct: 207 PYY 209
>gi|303280321|ref|XP_003059453.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459289|gb|EEH56585.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 178
Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 79/123 (64%), Positives = 96/123 (78%), Gaps = 3/123 (2%)
Query: 8 MEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQH 67
ME+EA LR M AKV EM + G + ANREE DSRS+ VG VDY+CTPEE+Q H
Sbjct: 1 MEDEANKLRDMQAKVEEEMNT---IPGGAEANANREEADSRSIHVGGVDYACTPEELQMH 57
Query: 68 FQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVP 127
FQSCGTVNRVTI TDK+ PKG+AYVEFL+++AV AL LN++E+HGR++KV+ KRTNVP
Sbjct: 58 FQSCGTVNRVTILTDKYENPKGFAYVEFLEADAVANALLLNDTEVHGRKIKVSAKRTNVP 117
Query: 128 GMK 130
GMK
Sbjct: 118 GMK 120
>gi|384244690|gb|EIE18189.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 210
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 79/130 (60%), Positives = 96/130 (73%), Gaps = 4/130 (3%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RL +ME EA LR+ K + + D G+ A RE+ D+RSV+VG VDY+CT
Sbjct: 36 MKARLAQMEAEANKLREQQGKGEDSTLGRTD----GADAALREDADNRSVYVGQVDYACT 91
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEE+Q HFQSCGTVNRVTI TDKFG PKGYAY+EFL+++AV AL L+ SEL GR+LKV
Sbjct: 92 PEELQMHFQSCGTVNRVTILTDKFGNPKGYAYIEFLETDAVANALLLDSSELRGRELKVL 151
Query: 121 VKRTNVPGMK 130
KRTNVPG+K
Sbjct: 152 PKRTNVPGLK 161
>gi|307107787|gb|EFN56029.1| hypothetical protein CHLNCDRAFT_13079, partial [Chlorella
variabilis]
Length = 132
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/132 (61%), Positives = 97/132 (73%), Gaps = 6/132 (4%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSL--ANREEVDSRSVFVGNVDYS 58
MK RL +ME+EA L++M K E A GG S+ A +EE DSRSV+VGNVDYS
Sbjct: 5 MKARLADMEKEAAKLKEMQDKAQKEAGI----APGGPSVDAAAKEEADSRSVYVGNVDYS 60
Query: 59 CTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLK 118
CTPEE+Q HFQSCGTVNRVTI TDK G PKG+AY+EFL+++AV A L+ SEL R +K
Sbjct: 61 CTPEELQMHFQSCGTVNRVTILTDKMGNPKGFAYIEFLEADAVTNACLLDGSELRNRAIK 120
Query: 119 VTVKRTNVPGMK 130
V+ KRTNVPGMK
Sbjct: 121 VSPKRTNVPGMK 132
>gi|159476716|ref|XP_001696457.1| poly(A) binding protein [Chlamydomonas reinhardtii]
gi|158282682|gb|EDP08434.1| poly(A) binding protein [Chlamydomonas reinhardtii]
Length = 136
Score = 151 bits (382), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 2/132 (1%)
Query: 1 MKIRLKEMEEEATALRQMHA--KVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYS 58
+K +LKEMEEEA ++ + + A AA + A + EVDSRS+FVGNVDY
Sbjct: 5 LKRKLKEMEEEAARVKALSVSPRSPGGAAGAAAAAAQAQTEAEKAEVDSRSIFVGNVDYG 64
Query: 59 CTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLK 118
CTPEE+QQHF SCGTVNRVTI TDKFG PK +AYVEFL+ +AV A+ L+ SEL GRQ+K
Sbjct: 65 CTPEELQQHFASCGTVNRVTILTDKFGNPKAFAYVEFLEVDAVNNAVLLDNSELRGRQIK 124
Query: 119 VTVKRTNVPGMK 130
V+ KRTNVPG+K
Sbjct: 125 VSHKRTNVPGLK 136
>gi|440636403|gb|ELR06322.1| hypothetical protein GMDG_07913 [Geomyces destructans 20631-21]
Length = 209
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 93/130 (71%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EMEEEA LR+M A + + + D ++E++DSRS+FVGNVDY+ +
Sbjct: 29 MKRRVAEMEEEAAKLREMQASLDQQSSEMHD---------DKEDIDSRSIFVGNVDYAAS 79
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF GQPKGYAYVEF + +V +AL LNES GR LKV
Sbjct: 80 PEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPASVAQALVLNESLFRGRNLKV 139
Query: 120 TVKRTNVPGM 129
KRTN+PGM
Sbjct: 140 DPKRTNIPGM 149
>gi|358391874|gb|EHK41278.1| hypothetical protein TRIATDRAFT_169914, partial [Trichoderma
atroviride IMI 206040]
Length = 167
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/130 (59%), Positives = 92/130 (70%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EMEEEA LR+M A + + A D ++E VD+RS+FVGNVDYS +
Sbjct: 6 MKRRVAEMEEEAKKLREMQATLEQQSADLAD---------DKESVDARSIFVGNVDYSAS 56
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEEVQ HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR +KV
Sbjct: 57 PEEVQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVFKGRNIKV 116
Query: 120 TVKRTNVPGM 129
T KRTN+PGM
Sbjct: 117 TPKRTNIPGM 126
>gi|340520405|gb|EGR50641.1| predicted protein [Trichoderma reesei QM6a]
Length = 168
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/130 (59%), Positives = 92/130 (70%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EMEEEA LR+M A + + A D ++E VD+RS+FVGNVDYS +
Sbjct: 6 MKRRVAEMEEEAKKLREMQATLEQQSADLAD---------DKESVDARSIFVGNVDYSAS 56
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEEVQ HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR +KV
Sbjct: 57 PEEVQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVFKGRNIKV 116
Query: 120 TVKRTNVPGM 129
T KRTN+PGM
Sbjct: 117 TPKRTNIPGM 126
>gi|358378925|gb|EHK16606.1| hypothetical protein TRIVIDRAFT_19040, partial [Trichoderma virens
Gv29-8]
Length = 171
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/130 (59%), Positives = 92/130 (70%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EMEEEA LR+M A + + A D ++E VD+RS+FVGNVDYS +
Sbjct: 6 MKRRVAEMEEEAKKLREMQATLEQQSADLAD---------DKESVDARSIFVGNVDYSAS 56
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEEVQ HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR +KV
Sbjct: 57 PEEVQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVFKGRNIKV 116
Query: 120 TVKRTNVPGM 129
T KRTN+PGM
Sbjct: 117 TPKRTNIPGM 126
>gi|322694379|gb|EFY86210.1| putative rrm-type rna binding protein [Metarhizium acridum CQMa
102]
Length = 196
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/130 (59%), Positives = 92/130 (70%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EMEEEA LR+M A + + A D ++E VD+RS+FVGNVDYS +
Sbjct: 35 MKRRVAEMEEEAKKLREMQATLEQQSADLAD---------DKESVDARSIFVGNVDYSAS 85
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR +KV
Sbjct: 86 PEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALILNESVFKGRNIKV 145
Query: 120 TVKRTNVPGM 129
T KRTNVPGM
Sbjct: 146 TPKRTNVPGM 155
>gi|322711381|gb|EFZ02954.1| putative rrm-type rna binding protein [Metarhizium anisopliae ARSEF
23]
Length = 196
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/130 (59%), Positives = 92/130 (70%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EMEEEA LR+M A + + A D ++E VD+RS+FVGNVDYS +
Sbjct: 35 MKRRVAEMEEEAKKLREMQATLEQQSADLAD---------DKESVDARSIFVGNVDYSAS 85
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR +KV
Sbjct: 86 PEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALILNESVFKGRNIKV 145
Query: 120 TVKRTNVPGM 129
T KRTNVPGM
Sbjct: 146 TPKRTNVPGM 155
>gi|302912552|ref|XP_003050726.1| hypothetical protein NECHADRAFT_40692 [Nectria haematococca mpVI
77-13-4]
gi|256731664|gb|EEU45013.1| hypothetical protein NECHADRAFT_40692 [Nectria haematococca mpVI
77-13-4]
Length = 167
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/130 (57%), Positives = 92/130 (70%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EMEEEA LR+M A + + A D ++E +D+RS+FVGNVDYS +
Sbjct: 5 MKRRVAEMEEEAKKLREMQATLEQQSADLAD---------DKESIDARSIFVGNVDYSAS 55
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR +KV
Sbjct: 56 PEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVFKGRNIKV 115
Query: 120 TVKRTNVPGM 129
T KRTN+PGM
Sbjct: 116 TPKRTNIPGM 125
>gi|255074381|ref|XP_002500865.1| predicted protein [Micromonas sp. RCC299]
gi|226516128|gb|ACO62123.1| predicted protein [Micromonas sp. RCC299]
Length = 216
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/131 (57%), Positives = 100/131 (76%), Gaps = 2/131 (1%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RL MEEEA L+ +G++M + A G++ A+R E DSRSV VG VDY+ T
Sbjct: 37 MKKRLAAMEEEAQKLKDEANAIGDDMNTGD--GASGAADADRAEADSRSVHVGGVDYATT 94
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PEE+ +HF++CGTVNRVTI TDK+ PKG+AYVEFL+++AVQ A+ L ++E+HGR+L+V+
Sbjct: 95 PEELAKHFEACGTVNRVTILTDKYDNPKGFAYVEFLEADAVQNAIKLTDTEIHGRKLRVS 154
Query: 121 VKRTNVPGMKQ 131
KRTNVPGMKQ
Sbjct: 155 AKRTNVPGMKQ 165
>gi|320168622|gb|EFW45521.1| RNP domain-containing protein [Capsaspora owczarzaki ATCC 30864]
Length = 224
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 75/130 (57%), Positives = 93/130 (71%), Gaps = 7/130 (5%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
+K ++ EMEEEA LR+M A V ++ G S A++E++D+RSVFVGNVDYS T
Sbjct: 53 VKQKVAEMEEEAKKLREMQADVERQLG------VAGLSAASKEDIDARSVFVGNVDYSST 106
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEEVQ HF SCGTVNRVTI DK+ G PKG+AY+EF +AV A+ LN++ GRQLKV
Sbjct: 107 PEEVQAHFASCGTVNRVTILVDKYTGHPKGFAYLEFADKDAVNNAMSLNDTVFRGRQLKV 166
Query: 120 TVKRTNVPGM 129
T KRTNVP M
Sbjct: 167 TPKRTNVPFM 176
>gi|310800127|gb|EFQ35020.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 203
Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 75/130 (57%), Positives = 91/130 (70%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EMEEEA LR+M A + + + N+E++DSRS+FVGNVDYS +
Sbjct: 41 MKRRVAEMEEEAAKLREMQASLDQQSRELSE---------NKEDIDSRSIFVGNVDYSAS 91
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR +KV
Sbjct: 92 PEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVFKGRNIKV 151
Query: 120 TVKRTNVPGM 129
KRTNVPGM
Sbjct: 152 VPKRTNVPGM 161
>gi|328768093|gb|EGF78140.1| hypothetical protein BATDEDRAFT_91010 [Batrachochytrium
dendrobatidis JAM81]
Length = 182
Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 74/127 (58%), Positives = 93/127 (73%), Gaps = 9/127 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+KEMEEEA L++M A+V EM G S++++EEVD RSV++GNVDYS T
Sbjct: 30 MKKRVKEMEEEAAKLKEMQAEVEKEM--------GAQSVSDKEEVDFRSVYIGNVDYSAT 81
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCGT+NRVTI DKF G PKG+AY+EF + +V A+ L+ES GR +KV
Sbjct: 82 PEEIQAHFQSCGTINRVTILCDKFTGHPKGFAYLEFADAGSVANAVVLSESMFKGRLIKV 141
Query: 120 TVKRTNV 126
T KRTNV
Sbjct: 142 TAKRTNV 148
>gi|429860717|gb|ELA35441.1| rnp domain protein [Colletotrichum gloeosporioides Nara gc5]
Length = 218
Score = 148 bits (374), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 75/130 (57%), Positives = 92/130 (70%), Gaps = 9/130 (6%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EMEEEA LR+M A + + A + ++++VDSRS+FVGNVDYS +
Sbjct: 52 MKRRVAEMEEEAAKLREMQASLNQQ--------AQDLNTDDKQDVDSRSIFVGNVDYSAS 103
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR +KV
Sbjct: 104 PEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESIFKGRNIKV 163
Query: 120 TVKRTNVPGM 129
KRTNVPGM
Sbjct: 164 VPKRTNVPGM 173
>gi|380491263|emb|CCF35443.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 203
Score = 148 bits (374), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 75/130 (57%), Positives = 91/130 (70%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EMEEEA LR+M A + + + N+E++DSRS+FVGNVDYS +
Sbjct: 41 MKRRVAEMEEEAAKLREMQASLDQQSRELSE---------NKEDIDSRSIFVGNVDYSAS 91
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR +KV
Sbjct: 92 PEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVFKGRNIKV 151
Query: 120 TVKRTNVPGM 129
KRTNVPGM
Sbjct: 152 VPKRTNVPGM 161
>gi|302829278|ref|XP_002946206.1| hypothetical protein VOLCADRAFT_72471 [Volvox carteri f.
nagariensis]
gi|300269021|gb|EFJ53201.1| hypothetical protein VOLCADRAFT_72471 [Volvox carteri f.
nagariensis]
Length = 242
Score = 148 bits (374), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 79/142 (55%), Positives = 98/142 (69%), Gaps = 12/142 (8%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSL------------ANREEVDSR 48
+K RLK+MEEEA ++ + + A+ AA G++ + E+DSR
Sbjct: 43 LKRRLKDMEEEAARIKALAGVATDGAAAGTSGAANGAAAAAAAAVAAAAADVEKAEIDSR 102
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLN 108
S++VGNVDY CTPEE+QQHF CGTVNRVTI TDKFG PKGYAYVEFL+ +AVQ A+ L+
Sbjct: 103 SIYVGNVDYGCTPEELQQHFAQCGTVNRVTILTDKFGNPKGYAYVEFLEVDAVQNAVLLD 162
Query: 109 ESELHGRQLKVTVKRTNVPGMK 130
SEL GRQLKV KRTNVPG+K
Sbjct: 163 NSELRGRQLKVLQKRTNVPGLK 184
>gi|342887594|gb|EGU87076.1| hypothetical protein FOXB_02470 [Fusarium oxysporum Fo5176]
Length = 205
Score = 148 bits (373), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 75/130 (57%), Positives = 92/130 (70%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EMEEEA LR+M A + + A D ++E +D+RS+FVGNVDYS +
Sbjct: 44 MKRRVAEMEEEAKKLREMQATLEQQSADLAD---------DKESIDARSIFVGNVDYSAS 94
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PE++Q HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR +KV
Sbjct: 95 PEDIQSHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVFKGRNIKV 154
Query: 120 TVKRTNVPGM 129
T KRTNVPGM
Sbjct: 155 TPKRTNVPGM 164
>gi|406860694|gb|EKD13751.1| polyadenylate-binding protein 2 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 194
Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/130 (56%), Positives = 91/130 (70%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EMEEEA LR+M A + + D ++E++DSRS+FVGNVDYS T
Sbjct: 27 MKKRVAEMEEEAAKLREMQASLDVQSHDLSD---------DKEDIDSRSIFVGNVDYSAT 77
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PE++Q HF+SCG++NRVTI DKF G PKGYAYVEF + V +AL LN+S HGR LKV
Sbjct: 78 PEDIQAHFESCGSINRVTILLDKFTGHPKGYAYVEFTEPTLVAQALVLNDSMFHGRNLKV 137
Query: 120 TVKRTNVPGM 129
KRTN+PGM
Sbjct: 138 VPKRTNLPGM 147
>gi|389635639|ref|XP_003715472.1| polyadenylate-binding protein 2 [Magnaporthe oryzae 70-15]
gi|351647805|gb|EHA55665.1| polyadenylate-binding protein 2 [Magnaporthe oryzae 70-15]
Length = 193
Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/130 (57%), Positives = 92/130 (70%), Gaps = 9/130 (6%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EMEEEA LR+M A + D + S +R++VDSRS+FVGNVDYS +
Sbjct: 34 MKKRVAEMEEEAAKLREMQASL--------DSQSQELSTESRDDVDSRSIFVGNVDYSAS 85
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF GQPKG+AYVEF + V +AL LNES GR +KV
Sbjct: 86 PEEIQAHFQSCGSINRVTILLDKFTGQPKGFAYVEFTEPSLVAQALVLNESVFKGRNIKV 145
Query: 120 TVKRTNVPGM 129
+ KRTN PGM
Sbjct: 146 SPKRTNYPGM 155
>gi|46137511|ref|XP_390447.1| hypothetical protein FG10271.1 [Gibberella zeae PH-1]
Length = 208
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/130 (57%), Positives = 92/130 (70%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EMEEEA LR+M A + + A D ++E +D+RS+FVGNVDYS +
Sbjct: 46 MKRRVAEMEEEAKKLREMQATLEQQSAELAD---------DKESIDARSIFVGNVDYSAS 96
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PE++Q HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR +KV
Sbjct: 97 PEDIQGHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESMFKGRSIKV 156
Query: 120 TVKRTNVPGM 129
T KRTNVPGM
Sbjct: 157 TPKRTNVPGM 166
>gi|255939756|ref|XP_002560647.1| Pc16g02770 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585270|emb|CAP92947.1| Pc16g02770 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 191
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 91/130 (70%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EME EA LR+M A + + S Q+ N+E++D+RS+FVGNVDY +
Sbjct: 33 MKRRVAEMESEAAKLREMQADLDQQTESLQE---------NKEDIDARSIFVGNVDYGAS 83
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR LKV
Sbjct: 84 PEEIQAHFQSCGSINRVTILLDKFSGQPKGYAYVEFAEPSLVAQALVLNESVFRGRNLKV 143
Query: 120 TVKRTNVPGM 129
KRTN+PGM
Sbjct: 144 VPKRTNLPGM 153
>gi|408396974|gb|EKJ76125.1| hypothetical protein FPSE_03600 [Fusarium pseudograminearum CS3096]
Length = 207
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/130 (57%), Positives = 92/130 (70%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EMEEEA LR+M A + + A D ++E +D+RS+FVGNVDYS +
Sbjct: 45 MKRRVAEMEEEAKKLREMQATLEQQSAELAD---------DKESIDARSIFVGNVDYSAS 95
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PE++Q HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR +KV
Sbjct: 96 PEDIQGHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESMFKGRSIKV 155
Query: 120 TVKRTNVPGM 129
T KRTNVPGM
Sbjct: 156 TPKRTNVPGM 165
>gi|440461571|gb|ELQ32355.1| polyadenylate-binding protein 2 [Magnaporthe oryzae Y34]
gi|440489256|gb|ELQ68921.1| polyadenylate-binding protein 2 [Magnaporthe oryzae P131]
Length = 213
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/130 (57%), Positives = 92/130 (70%), Gaps = 9/130 (6%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EMEEEA LR+M A + D + S +R++VDSRS+FVGNVDYS +
Sbjct: 54 MKKRVAEMEEEAAKLREMQASL--------DSQSQELSTESRDDVDSRSIFVGNVDYSAS 105
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF GQPKG+AYVEF + V +AL LNES GR +KV
Sbjct: 106 PEEIQAHFQSCGSINRVTILLDKFTGQPKGFAYVEFTEPSLVAQALVLNESVFKGRNIKV 165
Query: 120 TVKRTNVPGM 129
+ KRTN PGM
Sbjct: 166 SPKRTNYPGM 175
>gi|11359595|pir||T49743 probable rrm-type rna binding protein [imported] - Neurospora
crassa
gi|40882336|emb|CAF06158.1| probable RRM-type RNA binding protein [Neurospora crassa]
Length = 215
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 91/130 (70%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EMEEEA LR+M A + + + N+E++DSRS+FVGNVDYS +
Sbjct: 48 MKRRVAEMEEEAAKLREMQASLDQQHHELTE---------NKEDIDSRSIFVGNVDYSAS 98
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR +KV
Sbjct: 99 PEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVFKGRNIKV 158
Query: 120 TVKRTNVPGM 129
KRTN+PGM
Sbjct: 159 VPKRTNIPGM 168
>gi|350286752|gb|EGZ67999.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 215
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 91/130 (70%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EMEEEA LR+M A + + + N+E++DSRS+FVGNVDYS +
Sbjct: 48 MKRRVAEMEEEAAKLREMQASLDQQHHELTE---------NKEDIDSRSIFVGNVDYSAS 98
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR +KV
Sbjct: 99 PEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVFKGRNIKV 158
Query: 120 TVKRTNVPGM 129
KRTN+PGM
Sbjct: 159 VPKRTNIPGM 168
>gi|336466383|gb|EGO54548.1| hypothetical protein NEUTE1DRAFT_69316 [Neurospora tetrasperma FGSC
2508]
Length = 229
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 91/130 (70%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EMEEEA LR+M A + + + N+E++DSRS+FVGNVDYS +
Sbjct: 62 MKRRVAEMEEEAAKLREMQASLDQQHHELTE---------NKEDIDSRSIFVGNVDYSAS 112
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR +KV
Sbjct: 113 PEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVFKGRNIKV 172
Query: 120 TVKRTNVPGM 129
KRTN+PGM
Sbjct: 173 VPKRTNIPGM 182
>gi|164426633|ref|XP_957585.2| polyadenylate-binding protein 2 [Neurospora crassa OR74A]
gi|157071415|gb|EAA28349.2| polyadenylate-binding protein 2 [Neurospora crassa OR74A]
Length = 229
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 91/130 (70%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EMEEEA LR+M A + + + N+E++DSRS+FVGNVDYS +
Sbjct: 62 MKRRVAEMEEEAAKLREMQASLDQQHHELTE---------NKEDIDSRSIFVGNVDYSAS 112
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR +KV
Sbjct: 113 PEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVFKGRNIKV 172
Query: 120 TVKRTNVPGM 129
KRTN+PGM
Sbjct: 173 VPKRTNIPGM 182
>gi|425774334|gb|EKV12642.1| hypothetical protein PDIG_42430 [Penicillium digitatum PHI26]
gi|425777024|gb|EKV15220.1| hypothetical protein PDIP_41010 [Penicillium digitatum Pd1]
Length = 191
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 91/130 (70%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EME EA LR+M A + + S Q+ N+E++D+RS+FVGNVDY +
Sbjct: 33 MKRRVAEMESEAAKLREMQADLDQQSESLQE---------NKEDIDARSIFVGNVDYGAS 83
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR LKV
Sbjct: 84 PEEIQAHFQSCGSINRVTILLDKFSGQPKGYAYVEFAEPSLVAQALVLNESVFRGRNLKV 143
Query: 120 TVKRTNVPGM 129
KRTN+PGM
Sbjct: 144 VPKRTNLPGM 153
>gi|336260077|ref|XP_003344835.1| hypothetical protein SMAC_06118 [Sordaria macrospora k-hell]
gi|380089032|emb|CCC12976.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 213
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 91/130 (70%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EMEEEA LR+M A + + + N+E++DSRS+FVGNVDYS +
Sbjct: 44 MKRRVAEMEEEAAKLREMQATLDQQHHELTE---------NKEDIDSRSIFVGNVDYSAS 94
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR +KV
Sbjct: 95 PEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPNLVAQALVLNESVFKGRNIKV 154
Query: 120 TVKRTNVPGM 129
KRTN+PGM
Sbjct: 155 VPKRTNIPGM 164
>gi|154310272|ref|XP_001554468.1| hypothetical protein BC1G_07056 [Botryotinia fuckeliana B05.10]
gi|347836575|emb|CCD51147.1| hypothetical protein [Botryotinia fuckeliana]
Length = 194
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/131 (55%), Positives = 93/131 (70%), Gaps = 10/131 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EMEEEA LR+M A + + ++ ++E++DSRS+FVGNVDYS +
Sbjct: 28 MKRRVAEMEEEAAKLREMQATLDQQSTDLRE---------DKEDIDSRSIFVGNVDYSAS 78
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PE++Q HFQSCG++NRVTI DKF G PKGYAYVEF++ V +AL LNES GR LKV
Sbjct: 79 PEDIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFVEPSLVAQALVLNESVFKGRNLKV 138
Query: 120 TVKRTNVPGMK 130
KRTNVPGM+
Sbjct: 139 VPKRTNVPGMQ 149
>gi|320586503|gb|EFW99173.1| rnp domain containing protein [Grosmannia clavigera kw1407]
Length = 194
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/130 (57%), Positives = 90/130 (69%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EMEEEA LR+M ++ D N+E+VDSRS+FVGNVDYS +
Sbjct: 30 MKRRVAEMEEEAARLREMQKDTEHQSQELAD---------NKEDVDSRSIFVGNVDYSAS 80
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR +KV
Sbjct: 81 PEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFSEPSLVAQALVLNESVFKGRNIKV 140
Query: 120 TVKRTNVPGM 129
KRTN+PGM
Sbjct: 141 VPKRTNIPGM 150
>gi|427796401|gb|JAA63652.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 300
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 74/145 (51%), Positives = 101/145 (69%), Gaps = 7/145 (4%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVGNVDY 57
+K R++EMEEEA L+QM ++V +M+ PA GGS +L + EVD+RS++VGNVDY
Sbjct: 73 IKARVREMEEEAEKLKQMQSEVEKQMSIS--PAGGGSLGLTLEEKIEVDARSIYVGNVDY 130
Query: 58 SCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 116
T EE++QHF CG++NRVTI DKF G PKG+AY+EF +++Q A+ L+ES GRQ
Sbjct: 131 GATAEELEQHFHGCGSINRVTILCDKFSGHPKGFAYIEFTDKDSIQTAMALDESLFRGRQ 190
Query: 117 LKVTVKRTNVPGMK-QHRPRRPNPF 140
+KV KRTN PG+ +RP P F
Sbjct: 191 IKVMTKRTNRPGISTTNRPPXPKGF 215
>gi|346969940|gb|EGY13392.1| polyadenylate-binding protein [Verticillium dahliae VdLs.17]
Length = 205
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/128 (57%), Positives = 89/128 (69%), Gaps = 10/128 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EMEEEA LR+M A + + D N+E++DSRS+FVGNVDYS +
Sbjct: 43 MKRRVAEMEEEAAKLREMQATLDTQTQDISD---------NKEDIDSRSIFVGNVDYSAS 93
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR +KV
Sbjct: 94 PEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVFKGRNIKV 153
Query: 120 TVKRTNVP 127
KRTN+P
Sbjct: 154 VPKRTNIP 161
>gi|302421908|ref|XP_003008784.1| polyadenylate-binding protein [Verticillium albo-atrum VaMs.102]
gi|261351930|gb|EEY14358.1| polyadenylate-binding protein [Verticillium albo-atrum VaMs.102]
Length = 205
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/128 (57%), Positives = 89/128 (69%), Gaps = 10/128 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EMEEEA LR+M A + + D N+E++DSRS+FVGNVDYS +
Sbjct: 43 MKRRVAEMEEEAAKLREMQATLDTQTQDVSD---------NKEDIDSRSIFVGNVDYSAS 93
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR +KV
Sbjct: 94 PEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVFKGRNIKV 153
Query: 120 TVKRTNVP 127
KRTN+P
Sbjct: 154 VPKRTNIP 161
>gi|119496085|ref|XP_001264816.1| RNP domain protein [Neosartorya fischeri NRRL 181]
gi|119412978|gb|EAW22919.1| RNP domain protein [Neosartorya fischeri NRRL 181]
Length = 190
Score = 145 bits (366), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 73/130 (56%), Positives = 91/130 (70%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EME EA LR+M A + + S ++ ++EE+D+RS+FVGNVDY +
Sbjct: 29 MKRRVAEMESEAAKLREMQATLDQQSESLRE---------DKEEIDARSIFVGNVDYGAS 79
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR LKV
Sbjct: 80 PEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQALVLNESVFRGRNLKV 139
Query: 120 TVKRTNVPGM 129
KRTN+PGM
Sbjct: 140 VPKRTNLPGM 149
>gi|345561633|gb|EGX44721.1| hypothetical protein AOL_s00188g59 [Arthrobotrys oligospora ATCC
24927]
Length = 204
Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 73/131 (55%), Positives = 92/131 (70%), Gaps = 10/131 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EME EA LR+M A + E + ++ ++EE+D+RS+FVGNVDY +
Sbjct: 29 MKKRMAEMEAEAQKLREMQANLDKENDNLKE---------DKEEIDARSIFVGNVDYGAS 79
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR LKV
Sbjct: 80 PEEIQTHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQALVLNESIFRGRALKV 139
Query: 120 TVKRTNVPGMK 130
KRTN+PGM+
Sbjct: 140 VPKRTNIPGMQ 150
>gi|121702091|ref|XP_001269310.1| RNP domain protein [Aspergillus clavatus NRRL 1]
gi|119397453|gb|EAW07884.1| RNP domain protein [Aspergillus clavatus NRRL 1]
Length = 188
Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 73/130 (56%), Positives = 91/130 (70%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EME EA LR+M A + + S ++ ++EE+D+RS+FVGNVDY +
Sbjct: 29 MKKRVAEMESEAAKLREMQATLDQQSESLRE---------DKEEIDARSIFVGNVDYGAS 79
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR LKV
Sbjct: 80 PEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQALVLNESVFRGRNLKV 139
Query: 120 TVKRTNVPGM 129
KRTN+PGM
Sbjct: 140 VPKRTNLPGM 149
>gi|402085387|gb|EJT80285.1| polyadenylate-binding protein 2 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 200
Score = 145 bits (365), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 91/130 (70%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EMEEEA LR+M A + ++ + +R++VDSRS+FVGNVDYS +
Sbjct: 37 MKKRVAEMEEEAAKLREMQANLDHQTQELSE---------SRDDVDSRSIFVGNVDYSAS 87
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR +KV
Sbjct: 88 PEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVFKGRNIKV 147
Query: 120 TVKRTNVPGM 129
KRTN PGM
Sbjct: 148 VPKRTNYPGM 157
>gi|346326841|gb|EGX96437.1| RNP domain-containing protein [Cordyceps militaris CM01]
Length = 201
Score = 145 bits (365), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 75/127 (59%), Positives = 90/127 (70%), Gaps = 10/127 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EME+EA LR+M A + + AS D ++E VDSRS+FVGNVDYS +
Sbjct: 39 MKRRVAEMEQEAEKLREMQASLEQQSASLAD---------DKESVDSRSIFVGNVDYSAS 89
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR +KV
Sbjct: 90 PEEIQAHFQSCGSINRVTILLDKFSGQPKGYAYVEFTEPSLVAQALVLNESVFKGRNIKV 149
Query: 120 TVKRTNV 126
T KRTNV
Sbjct: 150 TSKRTNV 156
>gi|70995100|ref|XP_752316.1| RNP domain protein [Aspergillus fumigatus Af293]
gi|66849951|gb|EAL90278.1| RNP domain protein [Aspergillus fumigatus Af293]
gi|159131072|gb|EDP56185.1| RNP domain protein [Aspergillus fumigatus A1163]
Length = 215
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/130 (56%), Positives = 91/130 (70%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EME EA LR+M A + + S ++ ++EE+D+RS+FVGNVDY +
Sbjct: 54 MKRRVAEMESEAAKLREMQATLDQQSESLRE---------DKEEIDARSIFVGNVDYGAS 104
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR LKV
Sbjct: 105 PEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQALVLNESVFRGRNLKV 164
Query: 120 TVKRTNVPGM 129
KRTN+PGM
Sbjct: 165 VPKRTNLPGM 174
>gi|400601143|gb|EJP68786.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 194
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/127 (59%), Positives = 90/127 (70%), Gaps = 10/127 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EMEEEA LR+M A + + AS D ++E VD+RS+FVGNVDYS +
Sbjct: 33 MKRRVAEMEEEAKKLREMQASLEQQSASLAD---------DKESVDARSIFVGNVDYSAS 83
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR +KV
Sbjct: 84 PEEIQAHFQSCGSINRVTILLDKFSGQPKGYAYVEFTEPSLVAQALVLNESVFKGRNIKV 143
Query: 120 TVKRTNV 126
T KRTNV
Sbjct: 144 TPKRTNV 150
>gi|67521766|ref|XP_658944.1| hypothetical protein AN1340.2 [Aspergillus nidulans FGSC A4]
gi|40746367|gb|EAA65523.1| hypothetical protein AN1340.2 [Aspergillus nidulans FGSC A4]
gi|259488327|tpe|CBF87685.1| TPA: RNP domain protein (AFU_orthologue; AFUA_1G09490) [Aspergillus
nidulans FGSC A4]
Length = 187
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/130 (55%), Positives = 91/130 (70%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EME EA LR+M A + + S ++ ++E++D+RS+FVGNVDY +
Sbjct: 30 MKRRVAEMESEAAKLREMQATLDQQSESLKE---------DKEDIDARSIFVGNVDYGAS 80
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR LKV
Sbjct: 81 PEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQALVLNESVFRGRNLKV 140
Query: 120 TVKRTNVPGM 129
KRTN+PGM
Sbjct: 141 VPKRTNLPGM 150
>gi|350629412|gb|EHA17785.1| hypothetical protein ASPNIDRAFT_55885 [Aspergillus niger ATCC 1015]
Length = 192
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/130 (56%), Positives = 91/130 (70%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EME EA LR+M A + + + ++ ++EE+D+RSVFVGNVDY +
Sbjct: 32 MKKRVAEMESEAAKLREMQATLDQQSENLRE---------DKEEIDARSVFVGNVDYGAS 82
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR LKV
Sbjct: 83 PEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQALVLNESVFRGRNLKV 142
Query: 120 TVKRTNVPGM 129
KRTN+PGM
Sbjct: 143 VPKRTNLPGM 152
>gi|145239151|ref|XP_001392222.1| polyadenylate-binding protein 2 [Aspergillus niger CBS 513.88]
gi|134076726|emb|CAK39785.1| unnamed protein product [Aspergillus niger]
Length = 189
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/130 (56%), Positives = 91/130 (70%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EME EA LR+M A + + + ++ ++EE+D+RSVFVGNVDY +
Sbjct: 29 MKKRVAEMESEAAKLREMQATLDQQSENLRE---------DKEEIDARSVFVGNVDYGAS 79
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR LKV
Sbjct: 80 PEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQALVLNESVFRGRNLKV 139
Query: 120 TVKRTNVPGM 129
KRTN+PGM
Sbjct: 140 VPKRTNLPGM 149
>gi|402590193|gb|EJW84124.1| hypothetical protein WUBG_04965 [Wuchereria bancrofti]
Length = 206
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/168 (47%), Positives = 109/168 (64%), Gaps = 12/168 (7%)
Query: 4 RLKEMEEEATALRQMHAKVGNEM--ASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTP 61
R+KE+EEEA +RQM + V +M ++ + + +S+ ++ E DSRSV+VGNVDY T
Sbjct: 45 RMKEIEEEAQLIRQMQSDVEKQMNMSTGSNTSQSVASIEDKIEADSRSVYVGNVDYCSTA 104
Query: 62 EEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
EE++ HF CG+VNRVTI TDKF G PKG+AY+EF EAVQ AL L+ES GRQ+KV
Sbjct: 105 EELEAHFHGCGSVNRVTILTDKFTGHPKGFAYIEFADKEAVQTALALDESLFRGRQIKVC 164
Query: 121 VKRTNVPGMK-QHRPRRPNPFMVYQSRGA--IIPPFLYSPYGYGKIPR 165
KRTN PG+ +RP R + RG +I ++Y+ Y + PR
Sbjct: 165 AKRTNRPGVSTTNRPPRA------RGRGGARVIVKYIYAGYRARRPPR 206
>gi|392568671|gb|EIW61845.1| polyadenylate-binding protein 2 [Trametes versicolor FP-101664 SS1]
Length = 192
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/132 (56%), Positives = 92/132 (69%), Gaps = 7/132 (5%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREE---VDSRSVFVGNVDY 57
MK R++EME EAT LR++ A E A + P G + EE DSRS++VGNVDY
Sbjct: 30 MKQRVEEMEREATKLRELQAAA--EKAERSTPT-GDQPMETEEEKAATDSRSIYVGNVDY 86
Query: 58 SCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 116
S TPEE+QQHFQ+CGT+NRVTI DKF G PKGYAYVEF ++E V AL ++ S GR
Sbjct: 87 SATPEEIQQHFQACGTINRVTILCDKFTGHPKGYAYVEFSETEHVDAALSMDNSLFRGRL 146
Query: 117 LKVTVKRTNVPG 128
+KVT KRTN+PG
Sbjct: 147 IKVTAKRTNIPG 158
>gi|242767348|ref|XP_002341352.1| RNP domain protein [Talaromyces stipitatus ATCC 10500]
gi|218724548|gb|EED23965.1| RNP domain protein [Talaromyces stipitatus ATCC 10500]
Length = 188
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/130 (56%), Positives = 90/130 (69%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EME EA LR+M + E S ++ ++E++D+RS+FVGNVDY +
Sbjct: 29 MKKRVAEMESEAAKLREMQQTLDAESESLRE---------DKEDIDARSIFVGNVDYGAS 79
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF G PKGYAYVEF + V +AL LNES GR LKV
Sbjct: 80 PEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFAEPSLVAQALVLNESVFRGRNLKV 139
Query: 120 TVKRTNVPGM 129
T KRTNVPGM
Sbjct: 140 TPKRTNVPGM 149
>gi|226291492|gb|EEH46920.1| hypothetical protein PADG_03018 [Paracoccidioides brasiliensis
Pb18]
Length = 264
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/130 (54%), Positives = 90/130 (69%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EME EA LR+M A + + S ++ ++E++D+RS+FVGNVDY +
Sbjct: 104 MKKRVAEMESEAAKLREMQASLDQQSESLRE---------DKEDIDARSIFVGNVDYGAS 154
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF G PKGYAYVEF + V +AL LNES GR LKV
Sbjct: 155 PEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFTEPSLVAQALVLNESVFRGRNLKV 214
Query: 120 TVKRTNVPGM 129
KRTN+PGM
Sbjct: 215 VPKRTNLPGM 224
>gi|212528088|ref|XP_002144201.1| RNP domain protein [Talaromyces marneffei ATCC 18224]
gi|210073599|gb|EEA27686.1| RNP domain protein [Talaromyces marneffei ATCC 18224]
Length = 190
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/130 (56%), Positives = 90/130 (69%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EME EA LR+M + E S ++ ++E++D+RS+FVGNVDY +
Sbjct: 29 MKKRVAEMESEAAKLREMQQTLDAESESLRE---------DKEDIDARSIFVGNVDYGAS 79
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF G PKGYAYVEF + V +AL LNES GR LKV
Sbjct: 80 PEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFAEPSLVAQALVLNESVFRGRNLKV 139
Query: 120 TVKRTNVPGM 129
T KRTNVPGM
Sbjct: 140 TPKRTNVPGM 149
>gi|358370907|dbj|GAA87517.1| RNP domain protein [Aspergillus kawachii IFO 4308]
Length = 190
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/130 (55%), Positives = 91/130 (70%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EME EA LR+M A + + + ++ ++EE+D+RS+FVGNVDY +
Sbjct: 29 MKKRVAEMESEAAKLREMQATLDQQSENLRE---------DKEEIDARSIFVGNVDYGAS 79
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR LKV
Sbjct: 80 PEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQALVLNESVFRGRNLKV 139
Query: 120 TVKRTNVPGM 129
KRTN+PGM
Sbjct: 140 VPKRTNLPGM 149
>gi|312072775|ref|XP_003139219.1| pabpn1-prov protein [Loa loa]
gi|307765621|gb|EFO24855.1| pabpn1-prov protein [Loa loa]
Length = 214
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/161 (48%), Positives = 106/161 (65%), Gaps = 12/161 (7%)
Query: 4 RLKEMEEEATALRQMHAKVGNEM--ASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTP 61
R+KE+EEEA +RQM + V +M ++ + + +S+ ++ E DSRSV+VGNVDY T
Sbjct: 45 RMKEIEEEAQLIRQMQSDVEKQMNMSTGSNTSQSVASIEDKIEADSRSVYVGNVDYCSTA 104
Query: 62 EEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
EE++ HF CG+VNRVTI TDKF G PKG+AY+EF EAVQ AL L+ES GRQ+KV
Sbjct: 105 EELEAHFHGCGSVNRVTILTDKFTGHPKGFAYIEFADKEAVQTALALDESLFRGRQIKVC 164
Query: 121 VKRTNVPGMK-QHRPRRPNPFMVYQSRGA--IIPPFLYSPY 158
KRTN PG+ +RP R + RG +I ++Y+ Y
Sbjct: 165 AKRTNRPGVSTTNRPPRT------RGRGGTRVIVKYIYAGY 199
>gi|116201543|ref|XP_001226583.1| hypothetical protein CHGG_08656 [Chaetomium globosum CBS 148.51]
gi|88177174|gb|EAQ84642.1| hypothetical protein CHGG_08656 [Chaetomium globosum CBS 148.51]
Length = 250
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/130 (55%), Positives = 94/130 (72%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK+R+ EME EA LR+M A + ++QD + ++E++D+RS+FVGNVDYS +
Sbjct: 89 MKLRVAEMEAEAAKLREMQASLDQ---ARQDLSE------DKEDIDNRSIFVGNVDYSTS 139
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LN+S GR +KV
Sbjct: 140 PEELQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFSEPNLVAQALVLNDSVFKGRNIKV 199
Query: 120 TVKRTNVPGM 129
KRTN+PGM
Sbjct: 200 EPKRTNIPGM 209
>gi|407928590|gb|EKG21444.1| hypothetical protein MPH_01242 [Macrophomina phaseolina MS6]
Length = 221
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/130 (54%), Positives = 92/130 (70%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R++EME EA LR+M A + ++ + ++ N+E++D+RSVFVGNVDY +
Sbjct: 53 MKKRVQEMEAEAAKLREMQASLDSQTETLRE---------NKEDIDARSVFVGNVDYGAS 103
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF G PKGYAYVEF + V +AL LNES GR +KV
Sbjct: 104 PEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFTEPSLVAQALVLNESVFRGRNIKV 163
Query: 120 TVKRTNVPGM 129
KRTN+PGM
Sbjct: 164 VPKRTNLPGM 173
>gi|427796791|gb|JAA63847.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 249
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/133 (52%), Positives = 96/133 (72%), Gaps = 6/133 (4%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVGNVDY 57
+K R++EMEEEA L+QM ++V +M+ PA GGS +L + EVD+RS++VGNVDY
Sbjct: 73 IKARVREMEEEAEKLKQMQSEVEKQMSIS--PAGGGSLGLTLEEKIEVDARSIYVGNVDY 130
Query: 58 SCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 116
T EE++QHF CG++NRVTI DKF G PKG+AY+EF +++Q A+ L+ES GRQ
Sbjct: 131 GATAEELEQHFHGCGSINRVTILCDKFSGHPKGFAYIEFTDKDSIQTAMALDESLFRGRQ 190
Query: 117 LKVTVKRTNVPGM 129
+KV KRTN PG+
Sbjct: 191 IKVMTKRTNRPGI 203
>gi|331215415|ref|XP_003320388.1| apoptosis regulator BCL-W [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309299378|gb|EFP75969.1| apoptosis regulator BCL-W [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 195
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/133 (57%), Positives = 91/133 (68%), Gaps = 4/133 (3%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEM---ASKQDPAAGGSSLANREEVDSRSVFVGNVDY 57
MK R++EME EA LR+M A+V EM PA G N+E VDSRSV+VGNVDY
Sbjct: 31 MKQRVREMEFEAEKLREMQAQVEKEMNESGQGGHPAPVGGMEENKEVVDSRSVYVGNVDY 90
Query: 58 SCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 116
T EE+Q HF SCGT+NR+TI DKF GQPKG+AY+EF V +A LN+S GRQ
Sbjct: 91 GSTAEEIQAHFASCGTINRITILCDKFTGQPKGFAYIEFADPMLVPQACLLNDSLFRGRQ 150
Query: 117 LKVTVKRTNVPGM 129
+KVT KRTNVPG+
Sbjct: 151 IKVTPKRTNVPGL 163
>gi|342320561|gb|EGU12501.1| Polyadenylate-binding protein 2 [Rhodotorula glutinis ATCC 204091]
Length = 238
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/132 (55%), Positives = 88/132 (66%), Gaps = 5/132 (3%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLAN-----REEVDSRSVFVGNV 55
MK R+ EME EA LR++ A + G S N R+ VD+RS++VGNV
Sbjct: 63 MKARVAEMEAEAAKLRELTAASEAAAGGGSAASNGDGSDVNMSDEDRQAVDARSIYVGNV 122
Query: 56 DYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGR 115
DY TPEE+QQHF SCGT+NRVTI DK+ PKGYAYVEF + VQ ALHLNES L GR
Sbjct: 123 DYHATPEEIQQHFASCGTINRVTILFDKYTGPKGYAYVEFAEPSLVQNALHLNESVLRGR 182
Query: 116 QLKVTVKRTNVP 127
Q+KV+ KRTN+P
Sbjct: 183 QIKVSEKRTNLP 194
>gi|169763928|ref|XP_001727864.1| polyadenylate-binding protein 2 [Aspergillus oryzae RIB40]
gi|83770892|dbj|BAE61025.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391871171|gb|EIT80336.1| splicing factor RNPS1, SR protein superfamily [Aspergillus oryzae
3.042]
Length = 187
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/130 (55%), Positives = 91/130 (70%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EME EA LR+M A + + + ++ ++EE+D+RS+FVGNVDY +
Sbjct: 29 MKRRVAEMESEAAKLREMQATLDQQSENLRE---------DKEEIDARSIFVGNVDYGAS 79
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LNES GR LKV
Sbjct: 80 PEEIQAHFQSCGSINRVTILLDKFSGQPKGYAYVEFAEPSLVAQALVLNESVFRGRNLKV 139
Query: 120 TVKRTNVPGM 129
KRTN+PGM
Sbjct: 140 VPKRTNLPGM 149
>gi|339245105|ref|XP_003378478.1| polyadenylate-binding protein 2 [Trichinella spiralis]
gi|316972604|gb|EFV56277.1| polyadenylate-binding protein 2 [Trichinella spiralis]
Length = 561
Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 68/140 (48%), Positives = 93/140 (66%), Gaps = 3/140 (2%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANRE--EVDSRSVFVGNVDYS 58
++ RLKEME EA +R +H++V +M + + ++ L E EVDSRSVFVGNVDY
Sbjct: 38 IRERLKEMEREAQLIRNLHSEVEKQMTTVLNESSSTIPLTTEEKIEVDSRSVFVGNVDYG 97
Query: 59 CTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQL 117
T E+++ HF CG +NRVTI D++ G+PKG+AYVEF E+ Q +L + ++ GRQ+
Sbjct: 98 ATAEQLEAHFHGCGAINRVTILCDRYSGRPKGFAYVEFADKESAQASLAMTDTLFRGRQI 157
Query: 118 KVTVKRTNVPGMKQHRPRRP 137
KV KRTN PGM R RRP
Sbjct: 158 KVLEKRTNRPGMGNTRARRP 177
>gi|164662126|ref|XP_001732185.1| hypothetical protein MGL_0778 [Malassezia globosa CBS 7966]
gi|159106087|gb|EDP44971.1| hypothetical protein MGL_0778 [Malassezia globosa CBS 7966]
Length = 215
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 77/130 (59%), Positives = 89/130 (68%), Gaps = 2/130 (1%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EME EA LR+M+ +V S AA S + EVD RS++VGNVDY T
Sbjct: 47 MKRRVAEMEAEAAKLREMN-EVAERDISGTASAASHPSEEEKMEVDGRSIYVGNVDYGAT 105
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+QQHFQSCGT+NRVTI DKF G PKG+AYVEF S V+ A LNES GR LKV
Sbjct: 106 PEEIQQHFQSCGTINRVTILCDKFTGHPKGFAYVEFADSSFVENAAVLNESLFRGRLLKV 165
Query: 120 TVKRTNVPGM 129
T KRTNVPG+
Sbjct: 166 TPKRTNVPGI 175
>gi|328860711|gb|EGG09816.1| hypothetical protein MELLADRAFT_29239 [Melampsora larici-populina
98AG31]
Length = 150
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 91/130 (70%), Gaps = 2/130 (1%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS-SLANREEVDSRSVFVGNVDYSC 59
MK R++EME EA LR+M A+V EM + G + + +RE VDSRSV+VGNVDY
Sbjct: 5 MKQRVREMEMEAEKLREMQAQVEKEMNEQGGGQEGNNPTEEDREAVDSRSVYVGNVDYGS 64
Query: 60 TPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLK 118
T EE+Q HF SCGT+NR+TI DKF GQPKGYAY+EF V +A LN+S GRQ+K
Sbjct: 65 TAEEIQAHFSSCGTINRITILCDKFTGQPKGYAYIEFSDPMLVHQACQLNDSLFRGRQIK 124
Query: 119 VTVKRTNVPG 128
VT KRTN+PG
Sbjct: 125 VTPKRTNLPG 134
>gi|295668084|ref|XP_002794591.1| hypothetical protein PAAG_03136 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|225679740|gb|EEH18024.1| polyadenylate-binding protein [Paracoccidioides brasiliensis Pb03]
gi|226286007|gb|EEH41573.1| hypothetical protein PAAG_03136 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 188
Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 71/130 (54%), Positives = 90/130 (69%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EME EA LR+M A + + S ++ ++E++D+RS+FVGNVDY +
Sbjct: 28 MKKRVAEMESEAAKLREMQASLDQQSESLRE---------DKEDIDARSIFVGNVDYGAS 78
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF G PKGYAYVEF + V +AL LNES GR LKV
Sbjct: 79 PEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFTEPSLVAQALVLNESVFRGRNLKV 138
Query: 120 TVKRTNVPGM 129
KRTN+PGM
Sbjct: 139 VPKRTNLPGM 148
>gi|261205936|ref|XP_002627705.1| RNP domain-containing protein [Ajellomyces dermatitidis SLH14081]
gi|239592764|gb|EEQ75345.1| RNP domain-containing protein [Ajellomyces dermatitidis SLH14081]
gi|239611077|gb|EEQ88064.1| RNP domain-containing protein [Ajellomyces dermatitidis ER-3]
gi|327350679|gb|EGE79536.1| RNP domain-containing protein [Ajellomyces dermatitidis ATCC 18188]
Length = 189
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 71/130 (54%), Positives = 90/130 (69%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EME EA LR+M A + + S ++ ++E++D+RS+FVGNVDY +
Sbjct: 28 MKRRVAEMESEAAKLREMQASLDQQSESLRE---------DKEDIDARSIFVGNVDYGAS 78
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF G PKGYAYVEF + V +AL LNES GR LKV
Sbjct: 79 PEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFTEPSLVAQALVLNESVFRGRNLKV 138
Query: 120 TVKRTNVPGM 129
KRTN+PGM
Sbjct: 139 VPKRTNLPGM 148
>gi|145348085|ref|XP_001418487.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578716|gb|ABO96780.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 144
Score = 142 bits (357), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 69/130 (53%), Positives = 93/130 (71%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
M+ RLKEME+EA L+ H KV + MA+++ A ++E D+RSV+VG VDY+ T
Sbjct: 15 MQRRLKEMEDEAEKLKGEHEKVDDAMAAEEAGKNPEEEAAKKQEADARSVYVGQVDYAST 74
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
PE++ F S GTVNRVTI DKF PKG+AYVEFL+ +AV A+ L+ +E+ GR++KV+
Sbjct: 75 PEDLANAFASAGTVNRVTILHDKFDNPKGFAYVEFLEPDAVHNAILLDGTEIRGRKIKVS 134
Query: 121 VKRTNVPGMK 130
KRTNVPGMK
Sbjct: 135 AKRTNVPGMK 144
>gi|240281788|gb|EER45291.1| RNP domain-containing protein [Ajellomyces capsulatus H143]
Length = 188
Score = 141 bits (356), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 71/130 (54%), Positives = 90/130 (69%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EME EA LR+M A + + S ++ ++E++D+RS+FVGNVDY +
Sbjct: 28 MKRRVAEMESEAAKLREMQASLDQQSESLRE---------DKEDIDARSIFVGNVDYGAS 78
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF G PKGYAYVEF + V +AL LNES GR LKV
Sbjct: 79 PEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFTEPSLVAQALVLNESVFRGRNLKV 138
Query: 120 TVKRTNVPGM 129
KRTN+PGM
Sbjct: 139 VPKRTNLPGM 148
>gi|367041013|ref|XP_003650887.1| hypothetical protein THITE_2110808 [Thielavia terrestris NRRL 8126]
gi|346998148|gb|AEO64551.1| hypothetical protein THITE_2110808 [Thielavia terrestris NRRL 8126]
Length = 193
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/130 (56%), Positives = 92/130 (70%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EME EA LR+M A + S+QD + ++E+VD+RS+FVGNVDYS +
Sbjct: 30 MKRRVAEMEAEAAKLREMQASLDQ---SRQDLSE------DKEDVDNRSIFVGNVDYSTS 80
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF G PKGYAYVEF + V +AL LN+S GR +KV
Sbjct: 81 PEELQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPNLVAQALVLNDSVFKGRNIKV 140
Query: 120 TVKRTNVPGM 129
KRTN+PGM
Sbjct: 141 EPKRTNIPGM 150
>gi|343427618|emb|CBQ71145.1| related to poly(a) binding protein II [Sporisorium reilianum SRZ2]
Length = 208
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/130 (57%), Positives = 87/130 (66%), Gaps = 6/130 (4%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EME EA LR++ G + P + REEVDSRS++VGNVDY T
Sbjct: 56 MKQRVAEMEAEAAKLRELQQAAGEAGGAGLHP-----TEEEREEVDSRSIYVGNVDYGAT 110
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEEVQQHFQSCGT+NRVTI DKF G PKG+AYVEF V A+ LNES GR +KV
Sbjct: 111 PEEVQQHFQSCGTINRVTILCDKFTGHPKGFAYVEFADPSLVANAMVLNESLFRGRLIKV 170
Query: 120 TVKRTNVPGM 129
T KRTN+PGM
Sbjct: 171 TAKRTNMPGM 180
>gi|171677925|ref|XP_001903913.1| hypothetical protein [Podospora anserina S mat+]
gi|170937031|emb|CAP61689.1| unnamed protein product [Podospora anserina S mat+]
Length = 209
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/130 (55%), Positives = 89/130 (68%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EME EA LR+M A + E QD ++E++D+RSVFVGNVDYS +
Sbjct: 34 MKRRVAEMEAEAAKLREMQASMDQERQGLQD---------DKEDIDNRSVFVGNVDYSAS 84
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HF CG++NRVTI DKF GQPKGYAYVEF + V +AL LN+S GR +KV
Sbjct: 85 PEELQSHFGDCGSINRVTILLDKFTGQPKGYAYVEFSEPNMVAQALVLNDSLFKGRNIKV 144
Query: 120 TVKRTNVPGM 129
KRTN+PGM
Sbjct: 145 EPKRTNLPGM 154
>gi|296425243|ref|XP_002842152.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638411|emb|CAZ86343.1| unnamed protein product [Tuber melanosporum]
Length = 190
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/130 (54%), Positives = 89/130 (68%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EME EA LR+M A + E ++ ++E++D+RS+FVGNVDY +
Sbjct: 27 MKRRVAEMEAEAAKLREMQATLDKETNELRE---------DKEDIDARSIFVGNVDYGAS 77
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF G PKGYAYVEF + V +AL LNES GR LKV
Sbjct: 78 PEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFTEPSLVAQALVLNESVFRGRSLKV 137
Query: 120 TVKRTNVPGM 129
KRTN+PGM
Sbjct: 138 VPKRTNLPGM 147
>gi|452984683|gb|EME84440.1| hypothetical protein MYCFIDRAFT_122613, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 185
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/130 (54%), Positives = 91/130 (70%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R++EME EA LR+M A V + + ++ ++E++DSRS+FVGNVDY +
Sbjct: 31 MKKRVEEMEAEAAKLREMQASVDAQTDNLRE---------SKEDIDSRSIFVGNVDYGAS 81
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF G PKGYAYVEF + V +AL LNES GR +KV
Sbjct: 82 PEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPNLVTQALVLNESVFRGRNIKV 141
Query: 120 TVKRTNVPGM 129
KRTN+PGM
Sbjct: 142 VPKRTNLPGM 151
>gi|340939483|gb|EGS20105.1| putative poly(A) binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 211
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/128 (56%), Positives = 88/128 (68%), Gaps = 10/128 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EME EA LR+M A + A + ++EEVDSRS+FVGNVDYS +
Sbjct: 36 MKRRVAEMEAEAAKLREMQASLDQARADLTE---------DKEEVDSRSIFVGNVDYSTS 86
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF GQPKGYAYVEF + V +AL LN+S GR +KV
Sbjct: 87 PEELQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQALVLNDSVFKGRNIKV 146
Query: 120 TVKRTNVP 127
KRTN+P
Sbjct: 147 APKRTNIP 154
>gi|388852116|emb|CCF54292.1| related to poly(a) binding protein II [Ustilago hordei]
Length = 205
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 87/130 (66%), Gaps = 6/130 (4%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EME EA LR++ G + P + REEVDSRS++VGNVDY T
Sbjct: 54 MKQRVAEMEAEAAKLRELQQAAGEAGGAGLHP-----TEEEREEVDSRSIYVGNVDYGAT 108
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+QQHFQSCGT+NRVTI DKF G PKGYAYVEF V A+ LNES GR +K+
Sbjct: 109 PEELQQHFQSCGTINRVTILCDKFTGHPKGYAYVEFADPSLVANAMVLNESLFRGRLIKI 168
Query: 120 TVKRTNVPGM 129
T KRTN+PGM
Sbjct: 169 TAKRTNMPGM 178
>gi|71013016|ref|XP_758548.1| hypothetical protein UM02401.1 [Ustilago maydis 521]
gi|46098206|gb|EAK83439.1| hypothetical protein UM02401.1 [Ustilago maydis 521]
Length = 204
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 88/130 (67%), Gaps = 6/130 (4%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EME EA LR++ G + P + REEVDSRS++VGNVDY T
Sbjct: 53 MKQRVAEMEAEAAKLRELQQAAGEAGGAGLHP-----TEEEREEVDSRSIYVGNVDYGAT 107
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEEVQQHFQSCGT+NRVTI DKF G PKG+AYVEF + V A+ LNES GR +KV
Sbjct: 108 PEEVQQHFQSCGTINRVTILCDKFTGHPKGFAYVEFAEPSLVANAMVLNESLFRGRLIKV 167
Query: 120 TVKRTNVPGM 129
T KRTN+PG+
Sbjct: 168 TAKRTNMPGL 177
>gi|119184697|ref|XP_001243223.1| hypothetical protein CIMG_07119 [Coccidioides immitis RS]
gi|392866108|gb|EAS28718.2| polyadenylate-binding protein 2 [Coccidioides immitis RS]
Length = 196
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/130 (53%), Positives = 90/130 (69%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EME EA LR+M A + + + ++ ++E++D+RS+FVGNVDY +
Sbjct: 28 MKQRVAEMESEAAKLREMQASLDKQSENLRE---------DKEDIDARSIFVGNVDYGAS 78
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF G PKGYAYVEF + V +AL LNES GR LKV
Sbjct: 79 PEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSLVAQALVLNESLFRGRNLKV 138
Query: 120 TVKRTNVPGM 129
KRTN+PGM
Sbjct: 139 VPKRTNLPGM 148
>gi|189195646|ref|XP_001934161.1| polyadenylate-binding protein 2 (Poly(A)-binding protein 2)
[Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187980040|gb|EDU46666.1| polyadenylate-binding protein 2 (Poly(A)-binding protein 2)
[Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 207
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/130 (56%), Positives = 90/130 (69%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
M+ R++EMEEEA LRQM A + NE ++ ++E+VD+RSVFVGNVDY +
Sbjct: 31 MRRRVQEMEEEAQKLRQMQAAIDNERHEMRE---------SKEDVDARSVFVGNVDYGAS 81
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQS G++NRVTI DKF G PKGYAYVEF + V EAL L+ SE R LKV
Sbjct: 82 PEEIQAHFQSIGSINRVTILLDKFTGHPKGYAYVEFTEPHLVNEALVLDGSEFRNRNLKV 141
Query: 120 TVKRTNVPGM 129
KRTN+PGM
Sbjct: 142 VPKRTNLPGM 151
>gi|303320527|ref|XP_003070263.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240109949|gb|EER28118.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320041356|gb|EFW23289.1| hypothetical protein CPSG_01188 [Coccidioides posadasii str.
Silveira]
Length = 196
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/130 (53%), Positives = 90/130 (69%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EME EA LR+M A + + + ++ ++E++D+RS+FVGNVDY +
Sbjct: 28 MKRRVAEMESEAAKLREMQASLDKQSENLRE---------DKEDIDARSIFVGNVDYGAS 78
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF G PKGYAYVEF + V +AL LNES GR LKV
Sbjct: 79 PEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSLVAQALVLNESLFRGRNLKV 138
Query: 120 TVKRTNVPGM 129
KRTN+PGM
Sbjct: 139 VPKRTNLPGM 148
>gi|340372421|ref|XP_003384742.1| PREDICTED: polyadenylate-binding protein 2-like [Amphimedon
queenslandica]
Length = 273
Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 71/131 (54%), Positives = 93/131 (70%), Gaps = 2/131 (1%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNE-MASKQDPAAGGSSLANREEVDSRSVFVGNVDYSC 59
+K R+KEMEEEA L++M +V E M SK ++ + E DSRSV+VGNVDY
Sbjct: 89 IKARVKEMEEEAEKLKEMQGEVEKELMGSKPAQTNNFPTMEEKLESDSRSVYVGNVDYQA 148
Query: 60 TPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLK 118
T EE+ QHF CG++NRVTI DK+ G PKG+AYVEF++S++V+ AL L+ES GRQ+K
Sbjct: 149 TAEELGQHFNGCGSINRVTILCDKYSGHPKGFAYVEFIESDSVKMALDLDESLFRGRQIK 208
Query: 119 VTVKRTNVPGM 129
VT KRTN PG+
Sbjct: 209 VTAKRTNRPGL 219
>gi|430811633|emb|CCJ30944.1| unnamed protein product [Pneumocystis jirovecii]
Length = 176
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/130 (55%), Positives = 90/130 (69%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EME EA LR++ AK+ E A L N+E++DSRSV+VGNVDY T
Sbjct: 25 MKQRVAEMEAEAEKLREIQAKLDKENAQ---------LLENKEDIDSRSVYVGNVDYGAT 75
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQ+CGT+NRVTI D++ G PKG+AY+EF + V +AL LNES GR LKV
Sbjct: 76 PEEIQAHFQTCGTINRVTILCDRYSGHPKGFAYIEFSEPGLVPQALVLNESLFRGRLLKV 135
Query: 120 TVKRTNVPGM 129
KRTN+PGM
Sbjct: 136 VPKRTNLPGM 145
>gi|398389564|ref|XP_003848243.1| hypothetical protein MYCGRDRAFT_77177 [Zymoseptoria tritici IPO323]
gi|339468117|gb|EGP83219.1| hypothetical protein MYCGRDRAFT_77177 [Zymoseptoria tritici IPO323]
Length = 199
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 69/130 (53%), Positives = 91/130 (70%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R++EME EA LR++ A + ++ + ++ N+E++D+RSVFVGNVDY +
Sbjct: 36 MKKRVEEMEAEAAKLRELQANIDSQADNLRE---------NKEDIDARSVFVGNVDYGAS 86
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF G PKGYAYVEF + V AL LN+S GR +KV
Sbjct: 87 PEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPNLVTPALVLNDSTFRGRAIKV 146
Query: 120 TVKRTNVPGM 129
KRTN+PGM
Sbjct: 147 VPKRTNLPGM 156
>gi|258568696|ref|XP_002585092.1| polyadenylate-binding protein 2 [Uncinocarpus reesii 1704]
gi|237906538|gb|EEP80939.1| polyadenylate-binding protein 2 [Uncinocarpus reesii 1704]
Length = 194
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/130 (53%), Positives = 90/130 (69%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EME EA LR+M A + + + ++ ++E++D+RS+FVGNVDY +
Sbjct: 28 MKRRVAEMESEAAKLREMQASLDKQSENLRE---------DKEDIDARSIFVGNVDYGAS 78
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF G PKGYAYVEF + V +AL LNES GR LKV
Sbjct: 79 PEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSLVAQALVLNESVFRGRNLKV 138
Query: 120 TVKRTNVPGM 129
KRTN+PGM
Sbjct: 139 VPKRTNLPGM 148
>gi|403416120|emb|CCM02820.1| predicted protein [Fibroporia radiculosa]
Length = 255
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/132 (53%), Positives = 91/132 (68%), Gaps = 4/132 (3%)
Query: 1 MKIRLKEMEEEATALRQMHA---KVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDY 57
MK R++EME+EA LR+M A K N A+ D + + ++ DSRS+FVGNVDY
Sbjct: 32 MKQRVEEMEKEANKLREMQAEAEKAENGSATDGDTSVPMETEDDKAAADSRSIFVGNVDY 91
Query: 58 SCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 116
+ TPEE+Q HFQ+CG +NRVTI DKF G PKG+AYVEF ++E V AL ++ S GR
Sbjct: 92 AATPEEIQMHFQACGVINRVTILCDKFTGHPKGFAYVEFGEAEHVDAALAMDNSLFRGRL 151
Query: 117 LKVTVKRTNVPG 128
+KVT KRTN+PG
Sbjct: 152 IKVTAKRTNIPG 163
>gi|367030447|ref|XP_003664507.1| hypothetical protein MYCTH_2307416 [Myceliophthora thermophila ATCC
42464]
gi|347011777|gb|AEO59262.1| hypothetical protein MYCTH_2307416 [Myceliophthora thermophila ATCC
42464]
Length = 186
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 71/127 (55%), Positives = 91/127 (71%), Gaps = 10/127 (7%)
Query: 4 RLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEE 63
R+ EME EA LR+M A + ++QD ++E+VD+RS+FVGNVDYS +PEE
Sbjct: 26 RVAEMEAEAAKLREMQASLDQ---ARQDLTE------DKEDVDNRSIFVGNVDYSTSPEE 76
Query: 64 VQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVK 122
+Q HFQSCG++NRVTI DKF GQPKGYAYVEF + + V +AL LN+S GR +KV K
Sbjct: 77 LQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFSEPQLVAQALVLNDSVFKGRNIKVEPK 136
Query: 123 RTNVPGM 129
RTN+PGM
Sbjct: 137 RTNIPGM 143
>gi|8918490|dbj|BAA97656.1| RNA-binding protein [Candida boidinii]
Length = 255
Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 63/130 (48%), Positives = 95/130 (73%), Gaps = 7/130 (5%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
+K +++EM++EA ALR+M ++GN LA R+++D+RSV++GN+DY+ T
Sbjct: 83 LKAKMEEMKQEANALREMQEQMGNNGTHPH------LDLAARQDIDNRSVYIGNLDYAAT 136
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
P+E+Q+HF+SCG++NR+TI T+KF G PKG+AY+EF + V +AL LN+S GR LK+
Sbjct: 137 PDELQKHFESCGSINRITIPTNKFTGNPKGFAYIEFSDASYVPQALSLNDSLFKGRNLKI 196
Query: 120 TVKRTNVPGM 129
+ KRTNVPG
Sbjct: 197 SAKRTNVPGF 206
>gi|330933365|ref|XP_003304145.1| hypothetical protein PTT_16602 [Pyrenophora teres f. teres 0-1]
gi|311319437|gb|EFQ87756.1| hypothetical protein PTT_16602 [Pyrenophora teres f. teres 0-1]
Length = 193
Score = 138 bits (348), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 72/129 (55%), Positives = 89/129 (68%), Gaps = 10/129 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
M+ R++EMEEEA LRQM A + NE ++ ++E+VD+RSVFVGNVDY +
Sbjct: 31 MRRRVQEMEEEAQKLRQMQAAIDNERHEMRE---------SKEDVDARSVFVGNVDYGAS 81
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQS G++NRVTI DKF G PKGYAYVEF + V EAL L+ SE R LKV
Sbjct: 82 PEEIQAHFQSIGSINRVTILLDKFTGHPKGYAYVEFTEPHLVNEALVLDNSEFRSRNLKV 141
Query: 120 TVKRTNVPG 128
KRTN+PG
Sbjct: 142 VPKRTNLPG 150
>gi|449301196|gb|EMC97207.1| hypothetical protein BAUCODRAFT_68306 [Baudoinia compniacensis UAMH
10762]
Length = 223
Score = 138 bits (348), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 68/130 (52%), Positives = 90/130 (69%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R++EME EA LR+M A + + ++ ++E++D RSVFVGNVDY +
Sbjct: 35 MKKRVQEMEAEAAKLREMQASIDAQTEGLRE---------SKEDIDGRSVFVGNVDYGAS 85
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQ+CG++NRVTI DKF G PKGYAYVEF + V +AL LN+S+ GR +KV
Sbjct: 86 PEEIQAHFQTCGSINRVTILLDKFTGHPKGYAYVEFSEPNLVTQALVLNDSQFRGRAIKV 145
Query: 120 TVKRTNVPGM 129
KRTN+PGM
Sbjct: 146 VPKRTNLPGM 155
>gi|170592979|ref|XP_001901242.1| pabpn1-prov protein [Brugia malayi]
gi|158591309|gb|EDP29922.1| pabpn1-prov protein, putative [Brugia malayi]
Length = 219
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/166 (46%), Positives = 106/166 (63%), Gaps = 17/166 (10%)
Query: 4 RLKEMEEEATALRQMHAKVGNEM--ASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTP 61
R+KE+EEEA +RQM + V +M ++ + + +S+ ++ E DSRSV+VGNVDY T
Sbjct: 45 RMKEIEEEAQLIRQMQSDVEKQMNMSTGSNTSQSVASIEDKIEADSRSVYVGNVDYCSTA 104
Query: 62 EEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLK-- 118
EE++ HF CG+VNRVTI TDKF G PKG+AY+EF EAVQ AL L+ES GRQ+K
Sbjct: 105 EELEAHFHGCGSVNRVTILTDKFTGHPKGFAYIEFADKEAVQTALALDESLFRGRQIKAS 164
Query: 119 ---VTVKRTNVPGMK-QHRPRRPNPFMVYQSRGA--IIPPFLYSPY 158
V KRTN PG+ +RP R + RG +I ++Y+ Y
Sbjct: 165 FCSVCAKRTNRPGVSTTNRPPRA------RGRGGARVIVKYIYAGY 204
>gi|451855129|gb|EMD68421.1| hypothetical protein COCSADRAFT_272630 [Cochliobolus sativus
ND90Pr]
gi|452004159|gb|EMD96615.1| hypothetical protein COCHEDRAFT_1018478 [Cochliobolus
heterostrophus C5]
Length = 206
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/130 (54%), Positives = 89/130 (68%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
M+ R++EMEEEA LRQM + NE ++ ++E+VD+RSVFVGNVDY +
Sbjct: 31 MRRRVQEMEEEAQKLRQMQQAIDNERHEMRE---------SKEDVDARSVFVGNVDYGAS 81
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQS G++NRVTI DKF G PKGYAYVEF + V EAL L+ S+ R LKV
Sbjct: 82 PEEIQAHFQSIGSINRVTILLDKFTGHPKGYAYVEFTEPHLVNEALVLDNSQFRNRNLKV 141
Query: 120 TVKRTNVPGM 129
KRTN+PGM
Sbjct: 142 VPKRTNLPGM 151
>gi|452822710|gb|EME29727.1| RNA-binding protein [Galdieria sulphuraria]
Length = 198
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/130 (53%), Positives = 87/130 (66%), Gaps = 14/130 (10%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK RL+EMEEEA L+++ + +E+ S EEVD RSV+VGNVDY T
Sbjct: 38 MKKRLQEMEEEANRLKEVQEQSASEVPSS-------------EEVDRRSVYVGNVDYGST 84
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HF+ CGT+NRVTI DKF G PKG+AY+EF E A+ LNES GR LKV
Sbjct: 85 PEELQAHFKECGTINRVTILCDKFTGHPKGFAYIEFATEEGANNAVILNESLFRGRNLKV 144
Query: 120 TVKRTNVPGM 129
++KRTNVPG+
Sbjct: 145 SIKRTNVPGI 154
>gi|390601291|gb|EIN10685.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 194
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/128 (55%), Positives = 86/128 (67%), Gaps = 6/128 (4%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+KEMEEEA LR++ E A K+ +G + + DSRSV+VGNVDY T
Sbjct: 27 MKQRVKEMEEEAAKLRELQ-----EQAEKEQSQSGPMDVDDPTAADSRSVYVGNVDYGAT 81
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQ+CG +NRVTI DKF G PKGYAYVEF + E V A+ L+ S GR LKV
Sbjct: 82 PEEIQAHFQACGVINRVTILCDKFTGHPKGYAYVEFSEPEHVDAAVALDNSLFRGRLLKV 141
Query: 120 TVKRTNVP 127
T KRTN+P
Sbjct: 142 TAKRTNIP 149
>gi|19112586|ref|NP_595794.1| poly(A) binding protein Pab2 [Schizosaccharomyces pombe 972h-]
gi|74675955|sp|O14327.1|PAB2_SCHPO RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName:
Full=Poly(A)-binding protein II; Short=PABII
gi|2467274|emb|CAB16904.1| poly(A) binding protein Pab2 [Schizosaccharomyces pombe]
Length = 166
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/130 (55%), Positives = 89/130 (68%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EME EA LR M ++ NE + ++ ++E +D++SV+VGNVDYS T
Sbjct: 17 MKERVAEMEAEAAKLRAMQEQLDNETEALRN---------DKESIDAQSVYVGNVDYSVT 67
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HF SCG+VNRVTI DKF G PKG+AY+EF + V AL LN S LH R LKV
Sbjct: 68 PEELQSHFASCGSVNRVTILCDKFTGHPKGFAYIEFSEPSLVPNALLLNGSMLHERPLKV 127
Query: 120 TVKRTNVPGM 129
T KRTNVPGM
Sbjct: 128 TPKRTNVPGM 137
>gi|449550073|gb|EMD41038.1| hypothetical protein CERSUDRAFT_62981 [Ceriporiopsis subvermispora
B]
Length = 195
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/131 (54%), Positives = 85/131 (64%), Gaps = 4/131 (3%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREE---VDSRSVFVGNVDY 57
MK R++EME EA LR++ A S +P G + E+ DSRS+FVGNVDY
Sbjct: 32 MKQRVEEMEREANKLRELQAAAEKAERSGSEPGDTGVPMETEEDKAAADSRSIFVGNVDY 91
Query: 58 SCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 116
S TPEE+Q HFQSCG +NRVTI DKF G PKGYAYVEF + E V A ++ S GR
Sbjct: 92 SATPEEIQVHFQSCGVINRVTILCDKFTGHPKGYAYVEFAEPEHVDAATAMDNSLFRGRL 151
Query: 117 LKVTVKRTNVP 127
+KVT KRTNVP
Sbjct: 152 IKVTAKRTNVP 162
>gi|326469996|gb|EGD94005.1| hypothetical protein TESG_01534 [Trichophyton tonsurans CBS 112818]
Length = 186
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/130 (51%), Positives = 90/130 (69%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
M+ RL +ME EA L +M A + + + ++ ++E++D+RS+FVGNVDY+ +
Sbjct: 29 MRERLTKMESEAAKLHEMQASLDQQTENLRE---------DKEDIDARSIFVGNVDYAAS 79
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF G PKGYAYVEF + V +AL LNES GR +KV
Sbjct: 80 PEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSLVAQALVLNESLFRGRNIKV 139
Query: 120 TVKRTNVPGM 129
KRTN+PGM
Sbjct: 140 VPKRTNLPGM 149
>gi|392592926|gb|EIW82252.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 197
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 69/135 (51%), Positives = 91/135 (67%), Gaps = 10/135 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS-----SLANREEVDSRSVFVGNV 55
MK R++EME EA LR++ A + S + GGS +L +++ DSRSV+VGNV
Sbjct: 35 MKQRVEEMEREAKKLRELQAAAETDDQSGE----GGSGEAMDTLEDKQAADSRSVYVGNV 90
Query: 56 DYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHG 114
DY TPEE+Q HFQ+CGT+NRVTI DKF G PKG+AYVEF + + + AL ++ S G
Sbjct: 91 DYGATPEEIQAHFQACGTINRVTILCDKFTGHPKGFAYVEFAEPDFIDAALAMDNSLFRG 150
Query: 115 RQLKVTVKRTNVPGM 129
R +KVT KRTN+PG
Sbjct: 151 RLIKVTAKRTNIPGF 165
>gi|452842735|gb|EME44671.1| hypothetical protein DOTSEDRAFT_72205 [Dothistroma septosporum
NZE10]
Length = 238
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 67/130 (51%), Positives = 91/130 (70%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R++EME EA LR+M A + ++ + ++ ++E++D+RS+FVGNVDY +
Sbjct: 53 MKKRVEEMEAEAAKLREMQASIDSQSDNLRE---------SKEDIDARSIFVGNVDYGAS 103
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQS G++NRVTI DKF G PKGYAYVEF + + V +AL LNES R +KV
Sbjct: 104 PEEIQAHFQSVGSINRVTILLDKFTGHPKGYAYVEFSEPQLVTQALVLNESVFRSRNIKV 163
Query: 120 TVKRTNVPGM 129
KRTN+PGM
Sbjct: 164 VPKRTNLPGM 173
>gi|449679958|ref|XP_002163300.2| PREDICTED: polyadenylate-binding protein 2-like [Hydra
magnipapillata]
Length = 224
Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 66/130 (50%), Positives = 89/130 (68%), Gaps = 1/130 (0%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
+K R+KEMEEEA L++M + + + S Q ++ +D RSV+VGNVDYS T
Sbjct: 44 IKARVKEMEEEAEKLKEMQKEAESSLMSPQHAVPSSLPGEDQASIDCRSVYVGNVDYSAT 103
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
E++QHF CG+VNRVTI DKF G PKG+AYVEF ++V+ A+ L++S GRQ+KV
Sbjct: 104 ASELEQHFHGCGSVNRVTILCDKFSGHPKGFAYVEFGDKDSVENAVQLSDSLFKGRQIKV 163
Query: 120 TVKRTNVPGM 129
T KRTNVPG+
Sbjct: 164 TAKRTNVPGI 173
>gi|332374616|gb|AEE62449.1| unknown [Dendroctonus ponderosae]
Length = 228
Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 104/165 (63%), Gaps = 9/165 (5%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAG---GSSLANREEVDSRSVFVGNVDY 57
+K R++EMEEEA L+Q+ ++V +M P S+ + EVD+RS++VGNVDY
Sbjct: 50 IKARVREMEEEAEKLKQLQSEVDKQMNLGSPPGITSPLNMSIEEKMEVDNRSIYVGNVDY 109
Query: 58 SCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 116
T EE++QHF CG++NRVTI ++F G PKG+AY+EF ++VQ A+ ++ES GRQ
Sbjct: 110 GATAEELEQHFHGCGSINRVTILCNRFDGHPKGFAYIEFGDRDSVQTAMAMDESLFRGRQ 169
Query: 117 LKVTVKRTNVPGMK-QHRPRRPNPFMVYQSRGAIIPPFLYSPYGY 160
+KV KRTN PG+ +RP R ++ RGA F YGY
Sbjct: 170 IKVMPKRTNRPGISTTNRPPRGRGVSTFRGRGASRGGF----YGY 210
>gi|357612937|gb|EHJ68241.1| polyadenylate binding protein 2 [Danaus plexippus]
Length = 217
Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 68/139 (48%), Positives = 94/139 (67%), Gaps = 5/139 (3%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAG---GSSLANREEVDSRSVFVGNVDY 57
+K R++EMEEEA L+QMH +V +M+ P SL + E D+RSV++GNVDY
Sbjct: 46 IKARVREMEEEAEKLKQMHTEVDKQMSLGSPPGLTSPLNMSLEEKIETDNRSVYIGNVDY 105
Query: 58 SCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 116
T EE++QHF CG++NRVTI +KF G PKG+AY+EF ++VQ A+ ++ES GRQ
Sbjct: 106 GATAEELEQHFHGCGSINRVTILCNKFDGHPKGFAYIEFGDKDSVQTAMAMDESLFRGRQ 165
Query: 117 LKVTVKRTNVPGMK-QHRP 134
+KV KRTN PG+ +RP
Sbjct: 166 IKVMPKRTNKPGLSTTNRP 184
>gi|383855268|ref|XP_003703137.1| PREDICTED: polyadenylate-binding protein 2-like [Megachile
rotundata]
Length = 228
Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 66/133 (49%), Positives = 93/133 (69%), Gaps = 4/133 (3%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAG---GSSLANREEVDSRSVFVGNVDY 57
+K R++EMEEEA L+Q+ ++V +M P SL ++ EVD+RS++VGNVDY
Sbjct: 50 IKARVREMEEEAEKLKQLQSEVDKQMNMGSPPGITSPLNMSLEDKREVDNRSIYVGNVDY 109
Query: 58 SCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 116
T EE++QHF CG+VNRVTI +KF G PKG+AY+EF + ++VQ A+ ++ES GRQ
Sbjct: 110 GATAEELEQHFHGCGSVNRVTILCNKFDGHPKGFAYIEFAERDSVQTAMAMDESMFRGRQ 169
Query: 117 LKVTVKRTNVPGM 129
+KV KRTN PG+
Sbjct: 170 IKVMPKRTNRPGL 182
>gi|390362827|ref|XP_799120.2| PREDICTED: polyadenylate-binding protein 2-like [Strongylocentrotus
purpuratus]
Length = 249
Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 68/133 (51%), Positives = 90/133 (67%), Gaps = 4/133 (3%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVGNVDY 57
+K R++EMEEEA L++M +V +M P A + SL + EVD+RSV+VGNVDY
Sbjct: 52 IKARVREMEEEAEKLKEMQNEVDKQMNLSSPPPAQAAPHLSLEEKGEVDARSVYVGNVDY 111
Query: 58 SCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 116
S T EE++ HF CG +NRVTI DKF G PKGYAYVEF++ +++ A LN S GRQ
Sbjct: 112 SATAEELESHFHGCGPINRVTILCDKFTGHPKGYAYVEFVEKDSIDTACTLNLSLFKGRQ 171
Query: 117 LKVTVKRTNVPGM 129
++V KRTN PG+
Sbjct: 172 IRVNAKRTNRPGI 184
>gi|380018099|ref|XP_003692973.1| PREDICTED: polyadenylate-binding protein 2-like [Apis florea]
Length = 228
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/133 (49%), Positives = 93/133 (69%), Gaps = 4/133 (3%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAG---GSSLANREEVDSRSVFVGNVDY 57
+K R++EMEEEA L+Q+ ++V +M P SL ++ EVD+RS++VGNVDY
Sbjct: 50 IKARVREMEEEAEKLKQLQSEVDKQMNMGSPPGITSPLNMSLEDKMEVDNRSIYVGNVDY 109
Query: 58 SCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 116
T EE++QHF CG+VNRVTI +KF G PKG+AY+EF + ++VQ A+ ++ES GRQ
Sbjct: 110 GATAEELEQHFHGCGSVNRVTILCNKFDGHPKGFAYIEFAERDSVQTAMAMDESMFRGRQ 169
Query: 117 LKVTVKRTNVPGM 129
+KV KRTN PG+
Sbjct: 170 IKVMPKRTNRPGL 182
>gi|66512323|ref|XP_393066.2| PREDICTED: polyadenylate-binding protein 2 [Apis mellifera]
Length = 228
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/133 (49%), Positives = 93/133 (69%), Gaps = 4/133 (3%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAG---GSSLANREEVDSRSVFVGNVDY 57
+K R++EMEEEA L+Q+ ++V +M P SL ++ EVD+RS++VGNVDY
Sbjct: 50 IKARVREMEEEAEKLKQLQSEVDKQMNMGSPPGITSPLNMSLEDKMEVDNRSIYVGNVDY 109
Query: 58 SCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 116
T EE++QHF CG+VNRVTI +KF G PKG+AY+EF + ++VQ A+ ++ES GRQ
Sbjct: 110 GATAEELEQHFHGCGSVNRVTILCNKFDGHPKGFAYIEFAERDSVQTAMAMDESMFRGRQ 169
Query: 117 LKVTVKRTNVPGM 129
+KV KRTN PG+
Sbjct: 170 IKVMPKRTNRPGL 182
>gi|395330550|gb|EJF62933.1| RNA-binding domain-containing protein, partial [Dichomitus squalens
LYAD-421 SS1]
Length = 168
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/135 (51%), Positives = 89/135 (65%), Gaps = 10/135 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSL-----ANREEVDSRSVFVGNV 55
MK R++EME EA LR++ A + A GG + ++ D+RS++VGNV
Sbjct: 5 MKQRVEEMEREANKLRELQAAA----EKAEQGAQGGEQVPMETEEDKAAADARSIYVGNV 60
Query: 56 DYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHG 114
DYS TPEE+QQHFQ+CGT+NRVTI DKF G PKGYAYVEF + E + AL ++ S G
Sbjct: 61 DYSATPEEIQQHFQACGTINRVTILCDKFTGHPKGYAYVEFAEPEFIDAALAMDNSLFRG 120
Query: 115 RQLKVTVKRTNVPGM 129
R +KVT KRTN+PG
Sbjct: 121 RLIKVTPKRTNIPGF 135
>gi|307171015|gb|EFN63078.1| Polyadenylate-binding protein 2 [Camponotus floridanus]
Length = 228
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/141 (48%), Positives = 95/141 (67%), Gaps = 6/141 (4%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAG---GSSLANREEVDSRSVFVGNVDY 57
+K R++EMEEEA L+Q+ ++V +M P SL ++ EVD+RS++VGNVDY
Sbjct: 50 IKARVREMEEEAEKLKQLQSEVDKQMNMGSPPGITSPLNMSLEDKMEVDNRSIYVGNVDY 109
Query: 58 SCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 116
T EE++QHF CG+VNRVTI +KF G PKG+AY+EF + ++VQ A+ ++ES GRQ
Sbjct: 110 GATAEELEQHFHGCGSVNRVTILCNKFDGHPKGFAYIEFAERDSVQTAMAMDESMFRGRQ 169
Query: 117 LKVTVKRTNVPG--MKQHRPR 135
+KV KRTN PG M PR
Sbjct: 170 IKVMPKRTNKPGFSMTNRGPR 190
>gi|409050235|gb|EKM59712.1| hypothetical protein PHACADRAFT_250387 [Phanerochaete carnosa
HHB-10118-sp]
Length = 203
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/138 (50%), Positives = 92/138 (66%), Gaps = 15/138 (10%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLAN--------REEVDSRSVFV 52
MK R++EME EA LR++ A A++ GG+S A+ R + D RS+F+
Sbjct: 33 MKQRVEEMEREANKLRELQA------AAENQEHEGGASDASVPMETEDERAQADQRSIFI 86
Query: 53 GNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESE 111
GNVDY+ TPEE+QQHFQ+CGT+NRVTI DKF G PKG+AYVEF + E++ AL ++ S
Sbjct: 87 GNVDYASTPEEIQQHFQACGTINRVTILCDKFTGHPKGFAYVEFAEPESIDTALAMDNSL 146
Query: 112 LHGRQLKVTVKRTNVPGM 129
GR +KVT KRTN+ G
Sbjct: 147 FRGRLIKVTSKRTNIHGF 164
>gi|340716338|ref|XP_003396656.1| PREDICTED: polyadenylate-binding protein 2-like [Bombus terrestris]
gi|350406230|ref|XP_003487700.1| PREDICTED: polyadenylate-binding protein 2-like [Bombus impatiens]
Length = 228
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/133 (48%), Positives = 93/133 (69%), Gaps = 4/133 (3%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAG---GSSLANREEVDSRSVFVGNVDY 57
+K R++EMEEEA L+Q+ ++V +M P SL ++ EVD+RS++VGNVDY
Sbjct: 50 IKARVREMEEEAEKLKQLQSEVDKQMNMGSPPGITSPLNMSLEDKMEVDNRSIYVGNVDY 109
Query: 58 SCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 116
T EE++QHF CG++NRVTI +KF G PKG+AY+EF + ++VQ A+ ++ES GRQ
Sbjct: 110 GATAEELEQHFHGCGSINRVTILCNKFDGHPKGFAYIEFAERDSVQTAMAIDESMFRGRQ 169
Query: 117 LKVTVKRTNVPGM 129
+KV KRTN PG+
Sbjct: 170 IKVMPKRTNRPGL 182
>gi|332026434|gb|EGI66562.1| Polyadenylate-binding protein 2 [Acromyrmex echinatior]
Length = 228
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/141 (48%), Positives = 95/141 (67%), Gaps = 6/141 (4%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAG---GSSLANREEVDSRSVFVGNVDY 57
+K R++EMEEEA L+Q+ ++V +M P SL ++ EVD+RS++VGNVDY
Sbjct: 50 IKARVREMEEEAEKLKQLQSEVDKQMNMGSPPGITSPLNMSLEDKMEVDNRSIYVGNVDY 109
Query: 58 SCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 116
T EE++QHF CG+VNRVTI +KF G PKG+AY+EF + ++VQ A+ ++ES GRQ
Sbjct: 110 GATAEELEQHFHGCGSVNRVTILCNKFDGHPKGFAYIEFAERDSVQTAMAMDESMFRGRQ 169
Query: 117 LKVTVKRTNVPG--MKQHRPR 135
+KV KRTN PG M PR
Sbjct: 170 IKVMPKRTNKPGFSMTNRGPR 190
>gi|307196969|gb|EFN78344.1| Polyadenylate-binding protein 2 [Harpegnathos saltator]
Length = 228
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/141 (48%), Positives = 95/141 (67%), Gaps = 6/141 (4%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAG---GSSLANREEVDSRSVFVGNVDY 57
+K R++EMEEEA L+Q+ ++V +M P SL ++ EVD+RS++VGNVDY
Sbjct: 50 IKARVREMEEEAEKLKQLQSEVDKQMNMGSPPGITSPLNMSLEDKMEVDNRSIYVGNVDY 109
Query: 58 SCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 116
T EE++QHF CG+VNRVTI +KF G PKG+AY+EF + ++VQ A+ ++ES GRQ
Sbjct: 110 GATAEELEQHFHGCGSVNRVTILCNKFDGHPKGFAYIEFAERDSVQTAMAMDESMFRGRQ 169
Query: 117 LKVTVKRTNVPG--MKQHRPR 135
+KV KRTN PG M PR
Sbjct: 170 IKVMPKRTNKPGFSMTNRGPR 190
>gi|384494630|gb|EIE85121.1| hypothetical protein RO3G_09831 [Rhizopus delemar RA 99-880]
Length = 203
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/128 (55%), Positives = 85/128 (66%), Gaps = 11/128 (8%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+K+ME EA LR M A+V M ++D +E VDSRSV+VGNVDY +
Sbjct: 42 MKQRVKDMENEAAKLRDMQAEVEKSMHPEED----------KEAVDSRSVYVGNVDYGAS 91
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCGT+NRVTI DKF G PKGYAYVEF + V A+ L+ S R LKV
Sbjct: 92 PEELQAHFQSCGTINRVTILCDKFTGHPKGYAYVEFAEPSFVNAAVSLDNSLFRARLLKV 151
Query: 120 TVKRTNVP 127
+ KRTNVP
Sbjct: 152 SPKRTNVP 159
>gi|58263254|ref|XP_569037.1| poly(A) binding protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134107872|ref|XP_777318.1| hypothetical protein CNBB1200 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260008|gb|EAL22671.1| hypothetical protein CNBB1200 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223687|gb|AAW41730.1| poly(A) binding protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 210
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/143 (52%), Positives = 87/143 (60%), Gaps = 13/143 (9%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSS-----LANREE-------VDSR 48
M+ RL EME E AL + GN + + G ++ N EE VD R
Sbjct: 34 MQARLAEMEAEKNALAASTSASGNGTPVSHNVSGGETNETHEGDGNMEEDGESSEAVDMR 93
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHL 107
SVF+GNVDY TPEE+Q HFQ+CGT+NRVTI DKF G PKGYAYVEF + VQ AL L
Sbjct: 94 SVFIGNVDYGATPEEIQAHFQACGTINRVTILCDKFTGHPKGYAYVEFAEPSIVQNALVL 153
Query: 108 NESELHGRQLKVTVKRTNVPGMK 130
NES GR L+V KRTNVPGM
Sbjct: 154 NESMFRGRMLQVKEKRTNVPGMN 176
>gi|125808904|ref|XP_001360914.1| GA15278 [Drosophila pseudoobscura pseudoobscura]
gi|109892812|sp|Q28ZX3.1|PABP2_DROPS RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|54636086|gb|EAL25489.1| GA15278 [Drosophila pseudoobscura pseudoobscura]
Length = 225
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/132 (51%), Positives = 92/132 (69%), Gaps = 3/132 (2%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMA--SKQDPAAGGSSLANREEVDSRSVFVGNVDYS 58
+K R+KEMEEEA ++QM ++V +MA S AA SL ++E+D+RSV+VGNVDY
Sbjct: 47 IKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLAAVPLSLEEKQEIDTRSVYVGNVDYG 106
Query: 59 CTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQL 117
+ EE++ HF CGT+NRVTI +K G PKG+AY+EF E V+ AL +NE+ GRQ+
Sbjct: 107 ASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGRQI 166
Query: 118 KVTVKRTNVPGM 129
KV KRTN PG+
Sbjct: 167 KVMSKRTNRPGL 178
>gi|321477676|gb|EFX88634.1| hypothetical protein DAPPUDRAFT_206317 [Daphnia pulex]
Length = 222
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/131 (50%), Positives = 94/131 (71%), Gaps = 2/131 (1%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAG-GSSLANREEVDSRSVFVGNVDYSC 59
+K R++EMEEEA L+ + ++V ++ S A+ S+ + EVD+RSVFVGNVDY
Sbjct: 49 IKARVREMEEEAEKLKMLQSEVEKQINSPTGVASSPNMSVEEKMEVDARSVFVGNVDYGA 108
Query: 60 TPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLK 118
T EE++QHF CG++NRVTI +K+ GQPKG+AY+EF ++VQ A+ L+ES GRQ+K
Sbjct: 109 TAEELEQHFHGCGSINRVTILCNKWDGQPKGFAYIEFGDKDSVQTAMALDESLFRGRQIK 168
Query: 119 VTVKRTNVPGM 129
V +KRTN PG+
Sbjct: 169 VMLKRTNRPGI 179
>gi|195383378|ref|XP_002050403.1| GJ22134 [Drosophila virilis]
gi|194145200|gb|EDW61596.1| GJ22134 [Drosophila virilis]
Length = 224
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/132 (51%), Positives = 92/132 (69%), Gaps = 3/132 (2%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMA--SKQDPAAGGSSLANREEVDSRSVFVGNVDYS 58
+K R+KEMEEEA ++QM ++V +MA S AA SL ++E+D+RSV+VGNVDY
Sbjct: 47 IKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLAAVPLSLEEKQEIDTRSVYVGNVDYG 106
Query: 59 CTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQL 117
+ EE++ HF CGT+NRVTI +K G PKG+AY+EF E V+ AL +NE+ GRQ+
Sbjct: 107 ASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEYVETALAMNETLFRGRQI 166
Query: 118 KVTVKRTNVPGM 129
KV KRTN PG+
Sbjct: 167 KVMSKRTNRPGL 178
>gi|291232664|ref|XP_002736265.1| PREDICTED: poly(A) binding protein, nuclear 1-like [Saccoglossus
kowalevskii]
Length = 231
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/130 (51%), Positives = 90/130 (69%), Gaps = 1/130 (0%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
+K R++EMEEEA L++M +V +M SL ++ EVD+RSV+VGNVDYS T
Sbjct: 54 IKARVREMEEEAEKLKEMQNEVEKQMNMTSPTQMTPISLEDKVEVDARSVYVGNVDYSAT 113
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
EE++ HF CG+VNRVTI DKF G PKG+AY+E+ ++VQ +L L+ES GRQ+KV
Sbjct: 114 AEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEYADKDSVQTSLALDESLFKGRQIKV 173
Query: 120 TVKRTNVPGM 129
KRTN PG+
Sbjct: 174 LPKRTNRPGI 183
>gi|440800318|gb|ELR21357.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 195
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 92/128 (71%), Gaps = 8/128 (6%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
+K ++++M+EEA L ++ +V +M + PA N + +D+RSV+VGNVDY+ T
Sbjct: 39 LKRQVQQMQEEAEKLEEIQKEVEAQMGTSPSPA-------NSQSIDARSVYVGNVDYAVT 91
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
P+E+Q HFQSCG +NR+TI DKF G PKGYAY+EF + +AV A+ LN++ +HGRQ+KV
Sbjct: 92 PQELQAHFQSCGPINRITILCDKFTGHPKGYAYIEFSEEDAVGNAVLLNDTVVHGRQIKV 151
Query: 120 TVKRTNVP 127
KRTNVP
Sbjct: 152 NPKRTNVP 159
>gi|210076154|ref|XP_504024.2| YALI0E16500p [Yarrowia lipolytica]
gi|199426927|emb|CAG79617.2| YALI0E16500p [Yarrowia lipolytica CLIB122]
Length = 184
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/132 (48%), Positives = 90/132 (68%), Gaps = 12/132 (9%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLA-NREEVDSRSVFVGNVDYSC 59
M+ RL++++EEA+ L M QD L ++EE+D+RS++VGNVDY
Sbjct: 30 MQARLQQLQEEASKLESMQ----------QDATKSSEDLKEDQEEIDARSIYVGNVDYGA 79
Query: 60 TPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLK 118
TP+E+++HF+ CG+V RVTI DKF G PKGYAY+EF + + V +A+ LN+SE RQLK
Sbjct: 80 TPQELEKHFEKCGSVQRVTILMDKFTGNPKGYAYIEFAEPKDVAQAVTLNDSEFRQRQLK 139
Query: 119 VTVKRTNVPGMK 130
V+ KRTN+PG K
Sbjct: 140 VSAKRTNIPGFK 151
>gi|393246337|gb|EJD53846.1| RNA-binding domain-containing protein, partial [Auricularia
delicata TFB-10046 SS5]
Length = 170
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/130 (54%), Positives = 87/130 (66%), Gaps = 5/130 (3%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R++EME+EA LR+M A+ +++ VD+RSV+VGNVDYS +
Sbjct: 6 MKQRVREMEQEALKLREMQAEAEAGAEGASGVEGE----EDKDAVDARSVYVGNVDYSAS 61
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCGT+NRVTI DKF G PKGYAYVEF + VQ A+ LNES GR +KV
Sbjct: 62 PEEIQAHFQSCGTINRVTILCDKFTGHPKGYAYVEFAEPAFVQHAMVLNESLFRGRLIKV 121
Query: 120 TVKRTNVPGM 129
KRTNVPG
Sbjct: 122 VPKRTNVPGF 131
>gi|389609797|dbj|BAM18510.1| glycine rich RNA binding protein, putative [Papilio xuthus]
Length = 218
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/141 (48%), Positives = 94/141 (66%), Gaps = 5/141 (3%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAG---GSSLANREEVDSRSVFVGNVDY 57
+K R++EMEEEA L+QM +V +M+ P S+ + E D+RSV+VGNVDY
Sbjct: 47 IKARVREMEEEAEKLKQMQTEVDKQMSMGSPPGLTSPLNMSIEEKIEADNRSVYVGNVDY 106
Query: 58 SCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 116
T EE++QHF CG++NRVTI +KF G PKG+AY+EF ++VQ A+ ++ES GRQ
Sbjct: 107 GATAEELEQHFHGCGSINRVTILCNKFDGHPKGFAYIEFGDKDSVQTAMAMDESLFRGRQ 166
Query: 117 LKVTVKRTNVPGMKQ-HRPRR 136
+KV KRTN PG+ +RP R
Sbjct: 167 IKVMPKRTNKPGLSSTNRPPR 187
>gi|389614949|dbj|BAM20476.1| glycine rich RNA binding protein, putative [Papilio polytes]
Length = 218
Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 68/141 (48%), Positives = 94/141 (66%), Gaps = 5/141 (3%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAG---GSSLANREEVDSRSVFVGNVDY 57
+K R++EMEEEA L+QM +V +M+ P S+ + E D+RSV+VGNVDY
Sbjct: 47 IKARVREMEEEAEKLKQMQTEVDKQMSMGSPPGLTSPLNMSIEEKIEADNRSVYVGNVDY 106
Query: 58 SCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 116
T EE++QHF CG++NRVTI +KF G PKG+AY+EF ++VQ A+ ++ES GRQ
Sbjct: 107 GATAEELEQHFHGCGSINRVTILCNKFDGHPKGFAYIEFGDKDSVQTAMAMDESLFRGRQ 166
Query: 117 LKVTVKRTNVPGMKQ-HRPRR 136
+KV KRTN PG+ +RP R
Sbjct: 167 IKVMPKRTNKPGLSSTNRPPR 187
>gi|195153805|ref|XP_002017814.1| GL17107 [Drosophila persimilis]
gi|194113610|gb|EDW35653.1| GL17107 [Drosophila persimilis]
Length = 225
Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 67/132 (50%), Positives = 92/132 (69%), Gaps = 3/132 (2%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMA--SKQDPAAGGSSLANREEVDSRSVFVGNVDYS 58
+K R+KEMEEEA ++QM ++V +MA S AA SL ++E+D+RSV+VGNVDY
Sbjct: 47 IKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLAAVPLSLEEKQEIDTRSVYVGNVDYG 106
Query: 59 CTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQL 117
+ EE++ HF CGT+NRVTI +K G PKG+A++EF E V+ AL +NE+ GRQ+
Sbjct: 107 ASAEELEAHFHGCGTINRVTILCNKADGHPKGFAFIEFGSKEFVETALAMNETLFRGRQI 166
Query: 118 KVTVKRTNVPGM 129
KV KRTN PG+
Sbjct: 167 KVMSKRTNRPGL 178
>gi|169604234|ref|XP_001795538.1| hypothetical protein SNOG_05129 [Phaeosphaeria nodorum SN15]
gi|111066400|gb|EAT87520.1| hypothetical protein SNOG_05129 [Phaeosphaeria nodorum SN15]
Length = 214
Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 69/130 (53%), Positives = 87/130 (66%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
M+ R++EMEEEA LR+M + E ++ ++E+VD+RSVFVGNVDY +
Sbjct: 31 MRRRVQEMEEEAAKLREMQQSLDTERHEMRE---------SKEDVDARSVFVGNVDYGAS 81
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQS G++NRVTI DKF G PKGYAYVEF + V EAL L+ S R LKV
Sbjct: 82 PEEIQAHFQSIGSINRVTILLDKFTGHPKGYAYVEFTEPSLVNEALVLDNSVFRSRNLKV 141
Query: 120 TVKRTNVPGM 129
KRTN+PGM
Sbjct: 142 VPKRTNLPGM 151
>gi|405118694|gb|AFR93468.1| poly(A) binding protein [Cryptococcus neoformans var. grubii H99]
Length = 201
Score = 132 bits (331), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 75/143 (52%), Positives = 87/143 (60%), Gaps = 13/143 (9%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSS-----LANREE-------VDSR 48
M+ RL EME E AL + GN + + G ++ N EE VD R
Sbjct: 25 MQARLAEMEAEKNALAASTSASGNGTPVPPNVSGGETNETHEGDGNMEEDGESSEAVDMR 84
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHL 107
SVF+GNVDY TPEE+Q HFQ+CGT+NRVTI DKF G PKGYAYVEF + VQ AL L
Sbjct: 85 SVFIGNVDYGATPEEIQAHFQACGTINRVTILCDKFTGHPKGYAYVEFAEPSIVQNALVL 144
Query: 108 NESELHGRQLKVTVKRTNVPGMK 130
NES GR L+V KRTNVPGM
Sbjct: 145 NESMFKGRMLQVKEKRTNVPGMN 167
>gi|195474616|ref|XP_002089587.1| Pabp2 [Drosophila yakuba]
gi|194175688|gb|EDW89299.1| Pabp2 [Drosophila yakuba]
Length = 225
Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 67/132 (50%), Positives = 91/132 (68%), Gaps = 3/132 (2%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMA--SKQDPAAGGSSLANREEVDSRSVFVGNVDYS 58
+K R+KEMEEEA ++QM ++V +MA S A SL ++E+D+RSV+VGNVDY
Sbjct: 47 IKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLATVPLSLEEKQEIDTRSVYVGNVDYG 106
Query: 59 CTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQL 117
+ EE++ HF CGT+NRVTI +K G PKG+AY+EF E V+ AL +NE+ GRQ+
Sbjct: 107 ASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGRQI 166
Query: 118 KVTVKRTNVPGM 129
KV KRTN PG+
Sbjct: 167 KVMSKRTNRPGL 178
>gi|289741433|gb|ADD19464.1| splicing factor RNPS1 [Glossina morsitans morsitans]
Length = 223
Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 72/152 (47%), Positives = 98/152 (64%), Gaps = 5/152 (3%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMA-SKQDPAAGGSSLANREEVDSRSVFVGNVDYSC 59
+K R+KEMEEEA ++QM ++V +MA S A SL ++E+D+RSV+VGNVDY
Sbjct: 47 IKARVKEMEEEAEKIKQMQSEVDKQMAGSTTGLATVPLSLEEKQEIDTRSVYVGNVDYGA 106
Query: 60 TPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLK 118
+ EE++ HF CGT+NRVTI +K G PKG+AY+EF E V+ AL +NE+ GRQ+K
Sbjct: 107 SAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGRQIK 166
Query: 119 VTVKRTNVPGMKQHRPRRPNPFMVYQSRGAII 150
V KRTN PG+ P ++ RGA I
Sbjct: 167 VMSKRTNRPGLS---TTNRFPRGTFRGRGARI 195
>gi|194757557|ref|XP_001961031.1| GF13666 [Drosophila ananassae]
gi|190622329|gb|EDV37853.1| GF13666 [Drosophila ananassae]
Length = 224
Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 67/132 (50%), Positives = 91/132 (68%), Gaps = 3/132 (2%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMA--SKQDPAAGGSSLANREEVDSRSVFVGNVDYS 58
+K R+KEMEEEA ++QM ++V +MA S A SL ++E+D+RSV+VGNVDY
Sbjct: 47 IKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLATVPLSLEEKQEIDTRSVYVGNVDYG 106
Query: 59 CTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQL 117
+ EE++ HF CGT+NRVTI +K G PKG+AY+EF E V+ AL +NE+ GRQ+
Sbjct: 107 ASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGRQI 166
Query: 118 KVTVKRTNVPGM 129
KV KRTN PG+
Sbjct: 167 KVMSKRTNRPGL 178
>gi|195332369|ref|XP_002032871.1| GM21011 [Drosophila sechellia]
gi|195581470|ref|XP_002080557.1| GD10545 [Drosophila simulans]
gi|194124841|gb|EDW46884.1| GM21011 [Drosophila sechellia]
gi|194192566|gb|EDX06142.1| GD10545 [Drosophila simulans]
Length = 229
Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 67/132 (50%), Positives = 91/132 (68%), Gaps = 3/132 (2%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMA--SKQDPAAGGSSLANREEVDSRSVFVGNVDYS 58
+K R+KEMEEEA ++QM ++V +MA S A SL ++E+D+RSV+VGNVDY
Sbjct: 51 IKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLATVPLSLEEKQEIDTRSVYVGNVDYG 110
Query: 59 CTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQL 117
+ EE++ HF CGT+NRVTI +K G PKG+AY+EF E V+ AL +NE+ GRQ+
Sbjct: 111 ASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGRQI 170
Query: 118 KVTVKRTNVPGM 129
KV KRTN PG+
Sbjct: 171 KVMSKRTNRPGL 182
>gi|194863574|ref|XP_001970507.1| GG23338 [Drosophila erecta]
gi|190662374|gb|EDV59566.1| GG23338 [Drosophila erecta]
Length = 224
Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 67/132 (50%), Positives = 91/132 (68%), Gaps = 3/132 (2%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMA--SKQDPAAGGSSLANREEVDSRSVFVGNVDYS 58
+K R+KEMEEEA ++QM ++V +MA S A SL ++E+D+RSV+VGNVDY
Sbjct: 47 IKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLATVPLSLEEKQEIDTRSVYVGNVDYG 106
Query: 59 CTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQL 117
+ EE++ HF CGT+NRVTI +K G PKG+AY+EF E V+ AL +NE+ GRQ+
Sbjct: 107 ASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGRQI 166
Query: 118 KVTVKRTNVPGM 129
KV KRTN PG+
Sbjct: 167 KVMSKRTNRPGL 178
>gi|164430255|gb|ABY55455.1| Pabp2 [Drosophila mauritiana]
gi|164430257|gb|ABY55456.1| Pabp2 [Drosophila mauritiana]
gi|164430259|gb|ABY55457.1| Pabp2 [Drosophila mauritiana]
gi|164430261|gb|ABY55458.1| Pabp2 [Drosophila mauritiana]
gi|164430263|gb|ABY55459.1| Pabp2 [Drosophila mauritiana]
gi|188504221|gb|ACD56226.1| PABP2 [Drosophila simulans]
gi|188504223|gb|ACD56227.1| PABP2 [Drosophila simulans]
gi|188504225|gb|ACD56228.1| PABP2 [Drosophila simulans]
gi|188504227|gb|ACD56229.1| PABP2 [Drosophila simulans]
gi|188504229|gb|ACD56230.1| PABP2 [Drosophila sechellia]
Length = 228
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/132 (50%), Positives = 91/132 (68%), Gaps = 3/132 (2%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMA--SKQDPAAGGSSLANREEVDSRSVFVGNVDYS 58
+K R+KEMEEEA ++QM ++V +MA S A SL ++E+D+RSV+VGNVDY
Sbjct: 51 IKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLATVPLSLEEKQEIDTRSVYVGNVDYG 110
Query: 59 CTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQL 117
+ EE++ HF CGT+NRVTI +K G PKG+AY+EF E V+ AL +NE+ GRQ+
Sbjct: 111 ASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGRQI 170
Query: 118 KVTVKRTNVPGM 129
KV KRTN PG+
Sbjct: 171 KVMSKRTNRPGL 182
>gi|195029099|ref|XP_001987412.1| GH21908 [Drosophila grimshawi]
gi|193903412|gb|EDW02279.1| GH21908 [Drosophila grimshawi]
Length = 224
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/132 (50%), Positives = 91/132 (68%), Gaps = 3/132 (2%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMA--SKQDPAAGGSSLANREEVDSRSVFVGNVDYS 58
+K R+KEMEEEA ++QM ++V +MA S A SL ++E+D+RSV+VGNVDY
Sbjct: 47 IKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLATVPLSLEEKQEIDTRSVYVGNVDYG 106
Query: 59 CTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQL 117
+ EE++ HF CGT+NRVTI +K G PKG+AY+EF E V+ AL +NE+ GRQ+
Sbjct: 107 ASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEYVETALAMNETLFRGRQI 166
Query: 118 KVTVKRTNVPGM 129
KV KRTN PG+
Sbjct: 167 KVMSKRTNRPGL 178
>gi|195121132|ref|XP_002005075.1| GI19259 [Drosophila mojavensis]
gi|193910143|gb|EDW09010.1| GI19259 [Drosophila mojavensis]
Length = 224
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/132 (50%), Positives = 91/132 (68%), Gaps = 3/132 (2%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMA--SKQDPAAGGSSLANREEVDSRSVFVGNVDYS 58
+K R+KEMEEEA ++QM ++V +MA S A SL ++E+D+RSV+VGNVDY
Sbjct: 47 IKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLATVPLSLEEKQEIDTRSVYVGNVDYG 106
Query: 59 CTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQL 117
+ EE++ HF CGT+NRVTI +K G PKG+AY+EF E V+ AL +NE+ GRQ+
Sbjct: 107 ASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEYVETALAMNETLFRGRQI 166
Query: 118 KVTVKRTNVPGM 129
KV KRTN PG+
Sbjct: 167 KVMSKRTNRPGL 178
>gi|17136784|ref|NP_476902.1| Pabp2, isoform A [Drosophila melanogaster]
gi|24586513|ref|NP_724648.1| Pabp2, isoform B [Drosophila melanogaster]
gi|75009760|sp|Q7KNF2.1|PABP2_DROME RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; Short=dPABP2; AltName:
Full=Nuclear poly(A)-binding protein 1; AltName:
Full=Poly(A)-binding protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1; AltName:
Full=Protein rox2
gi|6007612|gb|AAF00976.1|AF116341_1 poly(A)-binding protein II [Drosophila melanogaster]
gi|7304089|gb|AAF59127.1| Pabp2, isoform A [Drosophila melanogaster]
gi|17944423|gb|AAL48102.1| RE74211p [Drosophila melanogaster]
gi|18447531|gb|AAL68327.1| RE69521p [Drosophila melanogaster]
gi|21627704|gb|AAM68852.1| Pabp2, isoform B [Drosophila melanogaster]
gi|220949012|gb|ACL87049.1| Pabp2-PA [synthetic construct]
gi|220958188|gb|ACL91637.1| Pabp2-PA [synthetic construct]
Length = 224
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/132 (50%), Positives = 91/132 (68%), Gaps = 3/132 (2%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMA--SKQDPAAGGSSLANREEVDSRSVFVGNVDYS 58
+K R+KEMEEEA ++QM ++V +MA S A SL ++E+D+RSV+VGNVDY
Sbjct: 47 IKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLATVPLSLEEKQEIDTRSVYVGNVDYG 106
Query: 59 CTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQL 117
+ EE++ HF CGT+NRVTI +K G PKG+AY+EF E V+ AL +NE+ GRQ+
Sbjct: 107 ASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGRQI 166
Query: 118 KVTVKRTNVPGM 129
KV KRTN PG+
Sbjct: 167 KVMSKRTNRPGL 178
>gi|195455316|ref|XP_002074665.1| GK23192 [Drosophila willistoni]
gi|194170750|gb|EDW85651.1| GK23192 [Drosophila willistoni]
Length = 225
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/132 (50%), Positives = 91/132 (68%), Gaps = 3/132 (2%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMA--SKQDPAAGGSSLANREEVDSRSVFVGNVDYS 58
+K R+KEMEEEA ++QM ++V +MA S A SL ++E+D+RSV+VGNVDY
Sbjct: 47 IKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLATVPLSLEEKQEIDTRSVYVGNVDYG 106
Query: 59 CTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQL 117
+ EE++ HF CGT+NRVTI +K G PKG+AY+EF E V+ AL +NE+ GRQ+
Sbjct: 107 ASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEYVETALAMNETLFRGRQI 166
Query: 118 KVTVKRTNVPGM 129
KV KRTN PG+
Sbjct: 167 KVMSKRTNRPGL 178
>gi|157093141|gb|ABV22225.1| RNA recognition motif protein [Karlodinium micrum]
Length = 197
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/130 (51%), Positives = 89/130 (68%), Gaps = 12/130 (9%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
M+ +++EMEEEA L+Q+ V + G + +REEVD RSV++G+VDY T
Sbjct: 25 MQKKVQEMEEEAEKLKQLTDSVEEQ----------GEGI-DREEVDKRSVYIGSVDYGST 73
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q+HF+SCG +NR+TI DK+ G PKG+AYVEF ++VQ +L LN S GRQLKV
Sbjct: 74 PEELQEHFKSCGQINRITILVDKYSGHPKGFAYVEFADEQSVQNSLLLNGSLFRGRQLKV 133
Query: 120 TVKRTNVPGM 129
KRTNVPG
Sbjct: 134 MQKRTNVPGF 143
>gi|112983360|ref|NP_001037644.1| polyadenylate binding protein 2 [Bombyx mori]
gi|109706831|gb|ABG43002.1| polyadenylate binding protein 2 [Bombyx mori]
Length = 218
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/139 (47%), Positives = 93/139 (66%), Gaps = 5/139 (3%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAG---GSSLANREEVDSRSVFVGNVDY 57
+K R++EMEEEA L+QM +V +M+ P S+ + E D+RSV+VGNVDY
Sbjct: 47 IKARVREMEEEAEKLKQMQTEVDKQMSMGSPPGLTSPLNMSIEEKIEADNRSVYVGNVDY 106
Query: 58 SCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 116
T EE++QHF CG++NRVTI +K+ G PKG+AY+EF ++VQ A+ ++ES GRQ
Sbjct: 107 GATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMDESLFRGRQ 166
Query: 117 LKVTVKRTNVPGMKQ-HRP 134
+KV KRTN PG+ +RP
Sbjct: 167 IKVMPKRTNKPGLSSTNRP 185
>gi|146413939|ref|XP_001482940.1| hypothetical protein PGUG_04895 [Meyerozyma guilliermondii ATCC
6260]
gi|146392639|gb|EDK40797.1| hypothetical protein PGUG_04895 [Meyerozyma guilliermondii ATCC
6260]
Length = 220
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 90/131 (68%), Gaps = 10/131 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
+K R++EME EA LR++HA++ + GG + R ++DSRS+++GNVDY T
Sbjct: 60 IKQRMEEMEREAAKLRELHAQLSED--------KGGDTEEERRDIDSRSIYIGNVDYGAT 111
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNE-SELHGRQLK 118
P E+QQHF S G VNRVTI T+K GQPKG+AY+EF + V +A+ + S HGR+LK
Sbjct: 112 PLELQQHFSSSGVVNRVTILTNKHTGQPKGFAYLEFADVDGVNKAVATQDGSSFHGRELK 171
Query: 119 VTVKRTNVPGM 129
V+ KRTN+PG+
Sbjct: 172 VSAKRTNIPGV 182
>gi|393215597|gb|EJD01088.1| polyadenylate-binding protein 2 [Fomitiporia mediterranea MF3/22]
Length = 201
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/143 (50%), Positives = 87/143 (60%), Gaps = 26/143 (18%)
Query: 1 MKIRLKEMEEEATALRQMHA---------------KVGNEMASKQDPAAGGSSLANREEV 45
MK RL+E+E+EA ALRQM G+EM + +DP A
Sbjct: 31 MKSRLEEIEKEAEALRQMREAQEKEAKAIAAVAAPSEGDEMETDEDPHAA---------- 80
Query: 46 DSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEA 104
D RSV+VGNVDY +PEE+Q HFQ+CGT+NRVTI DKF G PKGYAYVEF + V+ A
Sbjct: 81 DERSVYVGNVDYGASPEEIQAHFQACGTINRVTILCDKFTGHPKGYAYVEFAEPSFVETA 140
Query: 105 LHLNESELHGRQLKVTVKRTNVP 127
LNES GR +KV KRTN+P
Sbjct: 141 QTLNESLFKGRLIKVVPKRTNIP 163
>gi|453080432|gb|EMF08483.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 211
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 87/127 (68%), Gaps = 10/127 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R++EME EA LR+M A + N+ S ++ ++E++D+RS+FVGNVDY +
Sbjct: 31 MKKRVEEMEAEAAKLREMQASIDNQSDSLRE---------SKEDIDNRSIFVGNVDYGAS 81
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQS G++NRVTI DKF G PKGYAYVEF + + V AL LNES R +KV
Sbjct: 82 PEEIQAHFQSVGSINRVTILLDKFTGHPKGYAYVEFSEPQFVTSALVLNESVFRNRNIKV 141
Query: 120 TVKRTNV 126
KRTN+
Sbjct: 142 VPKRTNL 148
>gi|156399361|ref|XP_001638470.1| predicted protein [Nematostella vectensis]
gi|156225591|gb|EDO46407.1| predicted protein [Nematostella vectensis]
Length = 173
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/124 (54%), Positives = 87/124 (70%), Gaps = 4/124 (3%)
Query: 8 MEEEATALRQMHAKVGNEMASKQDPAAGG-SSLANREEVDSRSVFVGNVDYSCTPEEVQQ 66
MEEEA L++M +V + S PAA G + + EVD+RSV+VGNVDYS T EE++Q
Sbjct: 1 MEEEAEKLKEMQKQVEKSIMSP--PAASGPKTFEEKAEVDARSVYVGNVDYSATAEELEQ 58
Query: 67 HFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTN 125
HF CG+VNRVTI DKF G PKG+AYVEF ++V A+ L++S GRQ+KV +KRTN
Sbjct: 59 HFHGCGSVNRVTILCDKFSGHPKGFAYVEFSDKDSVDNAVLLSDSLFKGRQIKVVLKRTN 118
Query: 126 VPGM 129
PG+
Sbjct: 119 RPGV 122
>gi|606751|gb|AAA73522.1| RNA binding protein [Drosophila melanogaster]
Length = 224
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/132 (50%), Positives = 90/132 (68%), Gaps = 3/132 (2%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEM--ASKQDPAAGGSSLANREEVDSRSVFVGNVDYS 58
+K R+KEMEEEA ++QM ++V +M S A SL ++E+D+RSV+VGNVDY
Sbjct: 47 IKARVKEMEEEAEKIKQMQSEVDKQMRGGSTTGLATVPLSLEEKQEIDTRSVYVGNVDYG 106
Query: 59 CTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQL 117
+ EE++ HF CGT+NRVTI +K G PKG+AY+EF E V+ AL +NE+ GRQ+
Sbjct: 107 ASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGRQI 166
Query: 118 KVTVKRTNVPGM 129
KV KRTN PG+
Sbjct: 167 KVMSKRTNRPGL 178
>gi|296803623|ref|XP_002842664.1| RNP domain-containing protein [Arthroderma otae CBS 113480]
gi|238846014|gb|EEQ35676.1| RNP domain-containing protein [Arthroderma otae CBS 113480]
Length = 186
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 87/127 (68%), Gaps = 10/127 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
M+ RL +ME EA L +M A + + + ++ ++E++D+RS+FVGNVDY+ +
Sbjct: 29 MRERLTKMESEAAKLHEMQASLDQQTENLRE---------DKEDIDARSIFVGNVDYAAS 79
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF G PKGYAYVEF + V +AL LNES GR LKV
Sbjct: 80 PEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSLVAQALVLNESLFRGRNLKV 139
Query: 120 TVKRTNV 126
KRTN+
Sbjct: 140 VPKRTNL 146
>gi|156059388|ref|XP_001595617.1| hypothetical protein SS1G_03706 [Sclerotinia sclerotiorum 1980]
gi|154701493|gb|EDO01232.1| hypothetical protein SS1G_03706 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 182
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 64/119 (53%), Positives = 83/119 (69%), Gaps = 10/119 (8%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EMEEEA LR+M A + + ++ ++E++DSRS+FVGNVDYS +
Sbjct: 28 MKRRVAEMEEEAAKLREMQATLDQQSTDLRE---------DKEDIDSRSIFVGNVDYSAS 78
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLK 118
PE++Q HFQSCG++NRVTI DKF G PKGYAYVEF++ V +AL LNES GR LK
Sbjct: 79 PEDIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFVEPSLVAQALVLNESVFKGRNLK 137
>gi|327302280|ref|XP_003235832.1| hypothetical protein TERG_02884 [Trichophyton rubrum CBS 118892]
gi|326461174|gb|EGD86627.1| hypothetical protein TERG_02884 [Trichophyton rubrum CBS 118892]
Length = 186
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 64/127 (50%), Positives = 87/127 (68%), Gaps = 10/127 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
M+ RL +ME EA L +M A + + + ++ ++E++D+RS+FVGNVDY+ +
Sbjct: 29 MRERLTKMESEAAKLHEMQASLDQQTENLRE---------DKEDIDARSIFVGNVDYAAS 79
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF G PKGYAYVEF + V +AL LNES GR +KV
Sbjct: 80 PEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSLVAQALVLNESLFRGRNIKV 139
Query: 120 TVKRTNV 126
KRTN+
Sbjct: 140 VPKRTNL 146
>gi|315039445|ref|XP_003169098.1| polyadenylate-binding protein 2 [Arthroderma gypseum CBS 118893]
gi|311337519|gb|EFQ96721.1| polyadenylate-binding protein 2 [Arthroderma gypseum CBS 118893]
Length = 186
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 64/127 (50%), Positives = 87/127 (68%), Gaps = 10/127 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
M+ RL +ME EA L +M A + + + ++ ++E++D+RS+FVGNVDY+ +
Sbjct: 29 MRERLTKMESEAAKLHEMQASLDQQTENLRE---------DKEDIDARSIFVGNVDYAAS 79
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF G PKGYAYVEF + V +AL LNES GR +KV
Sbjct: 80 PEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSLVAQALVLNESLFRGRNIKV 139
Query: 120 TVKRTNV 126
KRTN+
Sbjct: 140 VPKRTNL 146
>gi|348679138|gb|EGZ18955.1| hypothetical protein PHYSODRAFT_409429 [Phytophthora sojae]
Length = 167
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 93/145 (64%), Gaps = 11/145 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANRE--------EVDSRSVFV 52
MK R+KEMEEEA L +M ++V ++M ++ A+ + + ++D S+++
Sbjct: 25 MKRRVKEMEEEAAKLSEMQSEVESQMG--KNTASTLNEMGAAGAAASAQPVQMDDTSIYI 82
Query: 53 GNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESE 111
G VDY TPEE+Q FQSCGT+NRVTI DKF GQPKGYAY+EF +AV+ AL LN++
Sbjct: 83 GQVDYGSTPEELQALFQSCGTINRVTILCDKFTGQPKGYAYIEFASRDAVESALLLNDTM 142
Query: 112 LHGRQLKVTVKRTNVPGMKQHRPRR 136
GRQLKVT KR NV G R R
Sbjct: 143 FRGRQLKVTPKRQNVRGFNMTRGGR 167
>gi|392576908|gb|EIW70038.1| hypothetical protein TREMEDRAFT_43661 [Tremella mesenterica DSM
1558]
Length = 186
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 67/134 (50%), Positives = 86/134 (64%), Gaps = 4/134 (2%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREE---VDSRSVFVGNVDY 57
M+ RL +ME E A+ +K + + G +S+ + + VD+RSV++GNVDY
Sbjct: 27 MQARLAQMEAEKNAIAAGGSKPSPAPKIQGEEGEGDASMEDEDAPAAVDARSVYIGNVDY 86
Query: 58 SCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 116
TPEE+Q HFQ+CGT+NRVTI DKF G PKGYAYVEF + VQ AL LN+S GR
Sbjct: 87 GATPEEIQAHFQACGTINRVTILCDKFTGHPKGYAYVEFAEPSIVQNALVLNDSMFRGRL 146
Query: 117 LKVTVKRTNVPGMK 130
L V KRTN+PGM
Sbjct: 147 LSVREKRTNIPGMN 160
>gi|405978177|gb|EKC42587.1| Polyadenylate-binding protein 2 [Crassostrea gigas]
Length = 244
Score = 128 bits (322), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 66/131 (50%), Positives = 89/131 (67%), Gaps = 2/131 (1%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEM-ASKQDPAAGGSSLANREEVDSRSVFVGNVDYSC 59
+K R++EMEEEA L++M +V +M + A+ S + + D+RSV+VGNVDY
Sbjct: 53 IKARVREMEEEAEKLKEMQKEVDTQMNLTSPTTASPFPSAEEKMDADARSVYVGNVDYGA 112
Query: 60 TPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLK 118
T EE++QHF CG+VNRVTI DKF G PKG+AYVEF ++V A L+ES GRQ+K
Sbjct: 113 TAEELEQHFHGCGSVNRVTILCDKFTGHPKGFAYVEFADKDSVTTAQALDESLFRGRQIK 172
Query: 119 VTVKRTNVPGM 129
V+ KRTN PG+
Sbjct: 173 VSAKRTNRPGI 183
>gi|325186974|emb|CCA21518.1| polyadenylatebinding protein 2 putative [Albugo laibachii Nc14]
Length = 235
Score = 128 bits (322), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 75/157 (47%), Positives = 92/157 (58%), Gaps = 31/157 (19%)
Query: 1 MKIRLKEMEEEATALRQMHAKV-----------------------GNEMASKQDPAA--- 34
MK R+KEMEEEA L +M ++V G+ + S + +
Sbjct: 42 MKRRVKEMEEEAAKLSEMQSQVESQMGKNTASSLNELNASASGSSGHAIGSNSNTSTNPN 101
Query: 35 GGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYV 93
GGSS A +D SV+VG VDY TPEE+Q FQSCGT+NRVTI DKF GQPKGYAY+
Sbjct: 102 GGSSTA----LDDSSVYVGQVDYGSTPEELQALFQSCGTINRVTILCDKFTGQPKGYAYI 157
Query: 94 EFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMK 130
EF +AV+ AL LN++ GRQLKVT KR NV G
Sbjct: 158 EFASKDAVESALLLNDTMFRGRQLKVTPKRQNVRGFN 194
>gi|242004476|ref|XP_002423109.1| Polyadenylate-binding protein, putative [Pediculus humanus
corporis]
gi|212506055|gb|EEB10371.1| Polyadenylate-binding protein, putative [Pediculus humanus
corporis]
Length = 221
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/133 (47%), Positives = 89/133 (66%), Gaps = 4/133 (3%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVGNVDY 57
+K R++EMEEEA L+Q+ +V ++ S SL + EVD+RS++VGNVDY
Sbjct: 45 IKARVREMEEEAEKLKQLQTEVEKQLNLGSPTGLTSSLNLSLEEKLEVDNRSIYVGNVDY 104
Query: 58 SCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 116
EE++QHF CG++NRVTI +K+ G PKG+AY+EF ++VQ A+ ++ES GRQ
Sbjct: 105 GANAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFADKDSVQTAMAMDESLFRGRQ 164
Query: 117 LKVTVKRTNVPGM 129
+KV KRTN PGM
Sbjct: 165 IKVNPKRTNKPGM 177
>gi|254568410|ref|XP_002491315.1| Cytoplasmic RNA-binding protein, contains an RNA recognition motif
(RRM) [Komagataella pastoris GS115]
gi|238031112|emb|CAY69035.1| Cytoplasmic RNA-binding protein, contains an RNA recognition motif
(RRM) [Komagataella pastoris GS115]
gi|328352168|emb|CCA38567.1| Embryonic polyadenylate-binding protein 2 [Komagataella pastoris
CBS 7435]
Length = 209
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/136 (47%), Positives = 91/136 (66%), Gaps = 12/136 (8%)
Query: 2 KIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---------SLANREEVDSRSVFV 52
K ++ EME E LR++ + E+ S+ + G + S+ R+E+DS+S++V
Sbjct: 35 KAKMAEMEAEVNKLRELQGQ--QEVGSRPENGVGTANSDSDPKFLSIEERQEIDSKSIYV 92
Query: 53 GNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESE 111
GNVD+S TP E+ +HF++CGTVNRVTI DK G+PKG+AYVEF +V E+L LN+SE
Sbjct: 93 GNVDFSATPGELAEHFKTCGTVNRVTILMDKVTGRPKGFAYVEFSDPSSVSESLVLNDSE 152
Query: 112 LHGRQLKVTVKRTNVP 127
HGR LKV KRTN+P
Sbjct: 153 FHGRNLKVVPKRTNMP 168
>gi|270010566|gb|EFA07014.1| hypothetical protein TcasGA2_TC009984 [Tribolium castaneum]
Length = 225
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/141 (46%), Positives = 94/141 (66%), Gaps = 5/141 (3%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS---SLANREEVDSRSVFVGNVDY 57
+K R++EMEEEA L+Q+ ++V +M P SL + EVD+RS++VGNVDY
Sbjct: 48 IKARVREMEEEAEKLKQLQSEVDKQMNMGSPPGLTSPLNMSLEEKMEVDNRSIYVGNVDY 107
Query: 58 SCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 116
T EE++QHF CG++NRVTI +K+ G PKG+AY+EF ++VQ A+ ++ES GR
Sbjct: 108 GATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDRDSVQTAMAMDESLFRGRP 167
Query: 117 LKVTVKRTNVPGMK-QHRPRR 136
+KV KRTN PG+ +RP R
Sbjct: 168 IKVMPKRTNRPGLSTTNRPPR 188
>gi|189239479|ref|XP_975440.2| PREDICTED: similar to polyadenylate binding protein 2 [Tribolium
castaneum]
Length = 222
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/141 (46%), Positives = 94/141 (66%), Gaps = 5/141 (3%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAG---GSSLANREEVDSRSVFVGNVDY 57
+K R++EMEEEA L+Q+ ++V +M P SL + EVD+RS++VGNVDY
Sbjct: 48 IKARVREMEEEAEKLKQLQSEVDKQMNMGSPPGLTSPLNMSLEEKMEVDNRSIYVGNVDY 107
Query: 58 SCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 116
T EE++QHF CG++NRVTI +K+ G PKG+AY+EF ++VQ A+ ++ES GR
Sbjct: 108 GATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDRDSVQTAMAMDESLFRGRP 167
Query: 117 LKVTVKRTNVPGMK-QHRPRR 136
+KV KRTN PG+ +RP R
Sbjct: 168 IKVMPKRTNRPGLSTTNRPPR 188
>gi|339253200|ref|XP_003371823.1| polyadenylate-binding protein 2 [Trichinella spiralis]
gi|316967866|gb|EFV52232.1| polyadenylate-binding protein 2 [Trichinella spiralis]
Length = 208
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 99/159 (62%), Gaps = 12/159 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEV--DSRSVFVGNVDYS 58
++ RLKEME+EA +R +H +V +M++ + + L + E+V DSRSVFVGNVDY
Sbjct: 15 IRARLKEMEKEAQLIRNLHTEVEKQMSTVLNESPTPPPLTSDEKVEADSRSVFVGNVDYG 74
Query: 59 CTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQL 117
EE++ HF CG +NR+TI D++ G+PKG+AY+EF E+ + +L + ++ GRQ+
Sbjct: 75 AAAEELEAHFHGCGAINRITILCDRYSGRPKGFAYIEFADKESARASLAMTDTLFRGRQI 134
Query: 118 KVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYS 156
KV KRTN PGM +R R RG + +LYS
Sbjct: 135 KVVEKRTNRPGMGFNRRR---------MRGRVAYRYLYS 164
>gi|324515910|gb|ADY46353.1| Polyadenylate-binding protein 2 [Ascaris suum]
Length = 217
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/138 (50%), Positives = 94/138 (68%), Gaps = 5/138 (3%)
Query: 4 RLKEMEEEATALRQMHAKVGNEM---ASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
R+KE+EEEA +RQM V +M +S ++ +S+ + E DSRS++VGNVDY T
Sbjct: 44 RMKEIEEEAQLIRQMQNDVEKQMNMSSSSSLASSTLASMEEKIEADSRSIYVGNVDYCST 103
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
EE++ HF CG+VNRVTI TDK+ G PKG+AY+EF E+VQ A+ L+ES GRQ+KV
Sbjct: 104 AEELEAHFHGCGSVNRVTILTDKYTGHPKGFAYIEFADKESVQTAMALDESLFRGRQIKV 163
Query: 120 TVKRTNVPGMK-QHRPRR 136
KRTN PG+ +RP R
Sbjct: 164 CPKRTNRPGVSTTNRPPR 181
>gi|213409842|ref|XP_002175691.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
yFS275]
gi|212003738|gb|EEB09398.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
yFS275]
Length = 174
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/130 (50%), Positives = 85/130 (65%), Gaps = 10/130 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EME EA LR+M ++ E + ++ ++E +D++SV+VGNVDYS T
Sbjct: 20 MKARVAEMEAEAEKLREMQEQLDKESEALRN---------DKEALDAQSVYVGNVDYSVT 70
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HF CG +NRVTI DKF G PKG+AY+EF + V AL N S LH R LKV
Sbjct: 71 PEELQAHFAECGPINRVTILCDKFTGHPKGFAYIEFAEPSVVPNALLRNGSMLHDRPLKV 130
Query: 120 TVKRTNVPGM 129
T KR N+PGM
Sbjct: 131 TPKRMNIPGM 140
>gi|158292594|ref|XP_313998.3| AGAP005117-PA [Anopheles gambiae str. PEST]
gi|157017065|gb|EAA09415.5| AGAP005117-PA [Anopheles gambiae str. PEST]
Length = 221
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/134 (50%), Positives = 88/134 (65%), Gaps = 4/134 (2%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANRE--EVDSRSVFVGNVDYS 58
+K R+KEMEEEA L+Q+ ++V +M + P L E EVD+RS++VGNVDY
Sbjct: 45 IKARVKEMEEEAEKLKQLQSEVTKQM-TLGSPTGSTPMLTAEEKAEVDNRSIYVGNVDYG 103
Query: 59 CTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQL 117
T EE++ HF CG +NRVTI +K G PKG+AY+EF E V+ AL +NE+ GRQ+
Sbjct: 104 ATAEELEAHFHGCGAINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGRQI 163
Query: 118 KVTVKRTNVPGMKQ 131
KV KRTN PGM Q
Sbjct: 164 KVNPKRTNRPGMCQ 177
>gi|170036993|ref|XP_001846345.1| polyadenylate-binding protein 2 [Culex quinquefasciatus]
gi|167879973|gb|EDS43356.1| polyadenylate-binding protein 2 [Culex quinquefasciatus]
Length = 218
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/132 (49%), Positives = 89/132 (67%), Gaps = 4/132 (3%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANRE--EVDSRSVFVGNVDYS 58
+K R+KEMEEEA L+Q+ ++V +M + P ++ E E+D+RS++VGNVDY
Sbjct: 45 IKARVKEMEEEAEKLKQLQSEVTKQM-TLGSPTGATPIMSAEEKAEIDNRSIYVGNVDYG 103
Query: 59 CTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQL 117
T EE++ HF CGT+NRVTI +K G PKG+AY+EF E V+ AL +NE+ GRQ+
Sbjct: 104 ATAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGRQI 163
Query: 118 KVTVKRTNVPGM 129
KV KRTN PGM
Sbjct: 164 KVNPKRTNRPGM 175
>gi|321248626|ref|XP_003191185.1| poly(A) binding protein [Cryptococcus gattii WM276]
gi|317457652|gb|ADV19398.1| Poly(A) binding protein, putative [Cryptococcus gattii WM276]
Length = 217
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/89 (68%), Positives = 67/89 (75%), Gaps = 1/89 (1%)
Query: 43 EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAV 101
E VD RSVF+GNVDY TPEE+Q HFQ+CGT+NRVTI DKF G PKGYAYVEF + V
Sbjct: 95 EAVDMRSVFIGNVDYGATPEEIQGHFQACGTINRVTILCDKFTGHPKGYAYVEFAEPSIV 154
Query: 102 QEALHLNESELHGRQLKVTVKRTNVPGMK 130
Q AL LNES GR L+V KRTNVPGM
Sbjct: 155 QNALVLNESMFRGRMLQVKEKRTNVPGMN 183
>gi|301097894|ref|XP_002898041.1| polyadenylate-binding protein 2 [Phytophthora infestans T30-4]
gi|262106486|gb|EEY64538.1| polyadenylate-binding protein 2 [Phytophthora infestans T30-4]
Length = 225
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/139 (48%), Positives = 91/139 (65%), Gaps = 13/139 (9%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANRE----------EVDSRSV 50
MK R+KEMEEEA L +M ++V ++M ++ A+ + + ++D S+
Sbjct: 49 MKRRVKEMEEEAAKLSEMQSEVESQMG--KNTASTLNEMNGGAAGAAANAQPAQMDDTSI 106
Query: 51 FVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNE 109
++G VDY TPEE+Q FQSCGT+NRVTI DKF GQPKGYAY+EF +AV+ AL LN+
Sbjct: 107 YIGQVDYGSTPEELQALFQSCGTINRVTILCDKFTGQPKGYAYIEFASHDAVESALLLND 166
Query: 110 SELHGRQLKVTVKRTNVPG 128
+ GRQLKVT KR NV G
Sbjct: 167 TMFRGRQLKVTPKRQNVRG 185
>gi|50420005|ref|XP_458535.1| DEHA2D01540p [Debaryomyces hansenii CBS767]
gi|49654202|emb|CAG86667.1| DEHA2D01540p [Debaryomyces hansenii CBS767]
Length = 218
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 67/128 (52%), Positives = 89/128 (69%), Gaps = 9/128 (7%)
Query: 4 RLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEE 63
R++EME+EA LR++H+++ N+ S DP S R ++DSRSV++GNVDY TP E
Sbjct: 52 RMEEMEKEAAKLRELHSQLSND--SNNDP-----SEEERRDIDSRSVYIGNVDYGSTPLE 104
Query: 64 VQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEAL-HLNESELHGRQLKVTV 121
+QQHF S G VNRVTI +KF GQPKG+AY+EF + V +A+ L+ S R+LKV
Sbjct: 105 LQQHFSSGGVVNRVTIPLNKFTGQPKGFAYLEFADIDGVNKAVATLDGSTFRDRELKVCA 164
Query: 122 KRTNVPGM 129
KRTNVPGM
Sbjct: 165 KRTNVPGM 172
>gi|426198097|gb|EKV48023.1| hypothetical protein AGABI2DRAFT_68353, partial [Agaricus bisporus
var. bisporus H97]
Length = 332
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/125 (55%), Positives = 84/125 (67%), Gaps = 10/125 (8%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSL-----ANREEVDSRSVFVGNV 55
MK R++EME EA LR+M A E A+ D + GG S ++ +DSRSV+VGNV
Sbjct: 5 MKQRVEEMEREAKKLREMQA--AAEKAA--DTSEGGESAPMDTEEDKNLIDSRSVYVGNV 60
Query: 56 DYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHG 114
DY TPEE+Q HFQSCGT+NRVTI DKF G PKGYAYVEF +SE V AL ++ S G
Sbjct: 61 DYGATPEEIQGHFQSCGTINRVTILCDKFTGHPKGYAYVEFAESEHVDAALSMDNSLFRG 120
Query: 115 RQLKV 119
R +KV
Sbjct: 121 RLIKV 125
>gi|225558865|gb|EEH07148.1| RNP domain-containing protein [Ajellomyces capsulatus G186AR]
Length = 150
Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 63/120 (52%), Positives = 81/120 (67%), Gaps = 10/120 (8%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EME EA LR+M A + + S ++ ++E++D+RS+FVGNVDY +
Sbjct: 28 MKRRVAEMESEAAKLREMQASLDQQSESLRE---------DKEDIDARSIFVGNVDYGAS 78
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF G PKGYAYVEF + V +AL LNES GR LK
Sbjct: 79 PEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFTEPSLVAQALVLNESVFRGRNLKA 138
>gi|409080136|gb|EKM80497.1| hypothetical protein AGABI1DRAFT_100088 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 343
Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 69/125 (55%), Positives = 84/125 (67%), Gaps = 10/125 (8%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSL-----ANREEVDSRSVFVGNV 55
MK R++EME EA LR+M A E A+ D + GG S ++ +DSRSV+VGNV
Sbjct: 33 MKQRVEEMEREAKKLREMQAAA--EKAA--DTSEGGESAPMDTEEDKNLIDSRSVYVGNV 88
Query: 56 DYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHG 114
DY TPEE+Q HFQSCGT+NRVTI DKF G PKGYAYVEF +SE V AL ++ S G
Sbjct: 89 DYGATPEEIQGHFQSCGTINRVTILCDKFTGHPKGYAYVEFAESEHVDAALSMDNSLFRG 148
Query: 115 RQLKV 119
R +KV
Sbjct: 149 RLIKV 153
>gi|157109619|ref|XP_001650751.1| glycine rich RNA binding protein, putative [Aedes aegypti]
gi|108868425|gb|EAT32650.1| AAEL015143-PB [Aedes aegypti]
Length = 222
Score = 125 bits (313), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 66/132 (50%), Positives = 87/132 (65%), Gaps = 4/132 (3%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANRE--EVDSRSVFVGNVDYS 58
+K R+KEMEEEA L+Q+ +V +M + P L E E+D+RS++VGNVDY
Sbjct: 45 IKARVKEMEEEAEKLKQLQTEVTKQM-TLGSPTGVTPILTAEEKAEIDNRSIYVGNVDYG 103
Query: 59 CTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQL 117
T EE++ HF CGT+NRVTI +K G PKG+AY+EF E V+ AL +NE+ GRQ+
Sbjct: 104 ATAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGRQI 163
Query: 118 KVTVKRTNVPGM 129
KV KRTN PGM
Sbjct: 164 KVNPKRTNRPGM 175
>gi|157109621|ref|XP_001650752.1| glycine rich RNA binding protein, putative [Aedes aegypti]
gi|94469160|gb|ABF18429.1| splicing factor RNPS1 [Aedes aegypti]
gi|108868426|gb|EAT32651.1| AAEL015143-PA [Aedes aegypti]
Length = 220
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/132 (50%), Positives = 87/132 (65%), Gaps = 4/132 (3%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANRE--EVDSRSVFVGNVDYS 58
+K R+KEMEEEA L+Q+ +V +M + P L E E+D+RS++VGNVDY
Sbjct: 45 IKARVKEMEEEAEKLKQLQTEVTKQM-TLGSPTGVTPILTAEEKAEIDNRSIYVGNVDYG 103
Query: 59 CTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQL 117
T EE++ HF CGT+NRVTI +K G PKG+AY+EF E V+ AL +NE+ GRQ+
Sbjct: 104 ATAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGRQI 163
Query: 118 KVTVKRTNVPGM 129
KV KRTN PGM
Sbjct: 164 KVNPKRTNRPGM 175
>gi|118096584|ref|XP_001232211.1| PREDICTED: polyadenylate-binding protein 2 [Gallus gallus]
Length = 249
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 103/184 (55%), Gaps = 15/184 (8%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
+K R++EMEEE L+++ + + + + + E D RS++VGNVDY T
Sbjct: 70 IKARVREMEEEDKRLKELQLEAESCLLMGSEAGLFQRMTEGKVEADQRSIYVGNVDYGGT 129
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
EE++ HF CG +NRVTI DKF G PKGYAY+EF Q +V+ A+ L+ES GR +KV
Sbjct: 130 AEELESHFNICGRINRVTILCDKFSGHPKGYAYIEFEQKSSVKAAVELDESIFRGRVIKV 189
Query: 120 TVKRTNVPGMKQ-HRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIP------RFRMPMRY 172
KRTN+PG+ R R F Q+RG +IP + Y YG P +R R
Sbjct: 190 LPKRTNMPGISSTDRGGRRGHF---QARGGLIPRWGY----YGGQPVRLRGRTYRGRARL 242
Query: 173 SPYY 176
P+Y
Sbjct: 243 LPWY 246
>gi|312373984|gb|EFR21644.1| hypothetical protein AND_16675 [Anopheles darlingi]
Length = 229
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 88/134 (65%), Gaps = 4/134 (2%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANRE--EVDSRSVFVGNVDYS 58
+K R+KEMEEEA L+Q+ ++V +M + P L E EVD+RS++VGNVDY
Sbjct: 45 IKARVKEMEEEAEKLKQLQSEVTKQM-TLGSPTGSTPMLTAEEKAEVDNRSIYVGNVDYG 103
Query: 59 CTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQL 117
T EE++ HF CG +NRVTI +K G PKG+AY+EF E V+ AL +NE+ GRQ+
Sbjct: 104 ATAEELEAHFHGCGAINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGRQI 163
Query: 118 KVTVKRTNVPGMKQ 131
KV KRTN PG+ Q
Sbjct: 164 KVNPKRTNRPGLCQ 177
>gi|391328788|ref|XP_003738866.1| PREDICTED: polyadenylate-binding protein 2-like [Metaseiulus
occidentalis]
Length = 193
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 88/130 (67%), Gaps = 9/130 (6%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
++ R++EM EEA L+++ ++V D S ++E+D RS++VGNVDY T
Sbjct: 29 LRARVREMAEEAEKLKKLQSEV--------DKNTTQLSEQEKKEIDQRSIYVGNVDYGAT 80
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
EE++QHF CG+VNRVTI DKF G PKG+AY+EF ++V+ A+ +++S GRQ+KV
Sbjct: 81 AEELEQHFHGCGSVNRVTILCDKFSGHPKGFAYIEFADKDSVETAMAMDDSLFRGRQIKV 140
Query: 120 TVKRTNVPGM 129
KRTN+PG+
Sbjct: 141 LQKRTNMPGI 150
>gi|68471223|ref|XP_720388.1| hypothetical protein CaO19.7097 [Candida albicans SC5314]
gi|77022430|ref|XP_888659.1| hypothetical protein CaO19_7097 [Candida albicans SC5314]
gi|46442253|gb|EAL01544.1| hypothetical protein CaO19.7097 [Candida albicans SC5314]
gi|76573472|dbj|BAE44556.1| hypothetical protein [Candida albicans]
gi|238883199|gb|EEQ46837.1| polyadenylate-binding protein 2 [Candida albicans WO-1]
Length = 187
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/138 (47%), Positives = 93/138 (67%), Gaps = 12/138 (8%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREE---VDSRSVFVGNVDY 57
+K +L+EME+E LR++H+++ +E + G + EE D+RS+++GNVDY
Sbjct: 20 VKNKLEEMEQETAKLRELHSQLSSE-------STNGVTHPTDEEKRDTDARSIYIGNVDY 72
Query: 58 SCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEAL-HLNESELHGR 115
TP E+QQHF S G VNRVTI T+KF GQPKG+AY+EF ++AV +A+ L+ S R
Sbjct: 73 GSTPLELQQHFSSAGVVNRVTILTNKFTGQPKGFAYLEFADTDAVNKAVATLDGSTFRER 132
Query: 116 QLKVTVKRTNVPGMKQHR 133
QLKV+ KRTN+PG+ R
Sbjct: 133 QLKVSAKRTNIPGISVKR 150
>gi|378729234|gb|EHY55693.1| apoptosis regulator BCL-W [Exophiala dermatitidis NIH/UT8656]
Length = 206
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/128 (54%), Positives = 83/128 (64%), Gaps = 10/128 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EME EA LR EM S+ + + G +RE+VD+RS+FVGNVDY T
Sbjct: 28 MKRRVAEMESEAAKLR--------EMQSQLEQQSEGGRREDREDVDARSIFVGNVDYGAT 79
Query: 61 PEEVQQHFQSC-GTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLK 118
PEE+Q HF S G++NRVTI DKF G PKGYAYVEF V +AL LNES GR LK
Sbjct: 80 PEEIQAHFASGPGSINRVTILLDKFTGHPKGYAYVEFSDPALVAQALVLNESVFRGRNLK 139
Query: 119 VTVKRTNV 126
V KRTN+
Sbjct: 140 VVPKRTNL 147
>gi|361128100|gb|EHL00053.1| putative E3 ubiquitin-protein ligase hulA [Glarea lozoyensis 74030]
Length = 1411
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 78/123 (63%), Gaps = 10/123 (8%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EMEEEA LR+M A + + D +E++DSRS+FVGNVDY +
Sbjct: 652 MKRRVAEMEEEAAKLREMQATMEQQHQDLDD---------KKEDIDSRSIFVGNVDYEAS 702
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HF +CG +NRVTI DKF G PKGYAYVEF + V +AL LNES GR LK
Sbjct: 703 PEEIQAHFTTCGPINRVTILLDKFTGHPKGYAYVEFTEPNLVAQALVLNESVFRGRNLKA 762
Query: 120 TVK 122
+
Sbjct: 763 VAE 765
>gi|326518878|dbj|BAJ92600.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 246
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 97/145 (66%), Gaps = 11/145 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASK---QDPAAGGSS----LANRE--EVDSRSVF 51
++ R++EMEEEA L+++ ++V EM++ P +S L+ +E E D+RSV+
Sbjct: 56 IRARVREMEEEAEKLKKLQSQVDQEMSNTPVLSSPNCSKTSATYNLSEQEKAEADARSVY 115
Query: 52 VGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNES 110
VGNVDY+ T EE++ HF CG++NRVTI +KF G PKG+AY+EF ++V A+ +++S
Sbjct: 116 VGNVDYAATAEELETHFHGCGSINRVTILCNKFDGHPKGFAYIEFADMDSVNTAMAMDDS 175
Query: 111 ELHGRQLKVTVKRTNVPGMK-QHRP 134
GRQ+KV KRTN PG+ +RP
Sbjct: 176 LFRGRQIKVNPKRTNKPGISTTNRP 200
>gi|443723317|gb|ELU11799.1| hypothetical protein CAPTEDRAFT_18178 [Capitella teleta]
Length = 157
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/132 (47%), Positives = 88/132 (66%), Gaps = 5/132 (3%)
Query: 8 MEEEATALRQMHAKVGNEM---ASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEV 64
MEEEA LR+M ++V ++ +S SL ++ + DSRS+++GNVDY+ T EE+
Sbjct: 1 MEEEAEKLREMQSEVEKQLILNSSSMGSPTPAISLEDKLDADSRSIWIGNVDYAATAEEL 60
Query: 65 QQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKR 123
HF CG+VNR TI DKF G PKG+AYVEF+ ++V+ A L++S GRQ+KVT KR
Sbjct: 61 GSHFHGCGSVNRATILCDKFSGHPKGFAYVEFVDKDSVETAQALDDSLFKGRQIKVTPKR 120
Query: 124 TNVPGMKQ-HRP 134
TN PG+ +RP
Sbjct: 121 TNRPGISSTNRP 132
>gi|193678811|ref|XP_001952437.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1
[Acyrthosiphon pisum]
Length = 246
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 97/145 (66%), Gaps = 11/145 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASK---QDPAAGGSS----LANRE--EVDSRSVF 51
++ R++EMEEEA L+++ ++V EM++ P +S L+ +E E D+RSV+
Sbjct: 56 IRARVREMEEEAEKLKKLQSQVDQEMSNTPVLSSPNCSKTSATYNLSEQEKAEADARSVY 115
Query: 52 VGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNES 110
VGNVDY+ T EE++ HF CG++NRVTI +KF G PKG+AY+EF ++V A+ +++S
Sbjct: 116 VGNVDYAATAEELETHFHGCGSINRVTILCNKFDGHPKGFAYIEFADMDSVNTAMAMDDS 175
Query: 111 ELHGRQLKVTVKRTNVPGMK-QHRP 134
GRQ+KV KRTN PG+ +RP
Sbjct: 176 LFRGRQIKVNPKRTNKPGISTTNRP 200
>gi|412993021|emb|CCO16554.1| predicted protein [Bathycoccus prasinos]
Length = 221
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 91/153 (59%), Gaps = 23/153 (15%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGN-----EMAS---------------KQDPAAGGSSLA 40
MK +L EME EA++LR+ + EMA ++ P A
Sbjct: 11 MKEKLAEMEREASSLREQEQGIDGKALDEEMAKHHHSDNNGQGQGGKPQKTPEELEKEKA 70
Query: 41 NREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEA 100
R+E+DSRSVFVG VDY P + +HF+ CGTVNRVTI TDKF PKG+AYVEFL+ +A
Sbjct: 71 ERQEIDSRSVFVGQVDYGAEPGMLAEHFKKCGTVNRVTILTDKFENPKGFAYVEFLEKDA 130
Query: 101 VQEALHLNESELH---GRQLKVTVKRTNVPGMK 130
V A+ L+ + L R+LKV+ KRTNVPGMK
Sbjct: 131 VDAAVLLDGTGLEEFPQRKLKVSAKRTNVPGMK 163
>gi|328725437|ref|XP_003248478.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2
[Acyrthosiphon pisum]
Length = 329
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/139 (44%), Positives = 94/139 (67%), Gaps = 10/139 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASK---QDPAAGGSS----LANRE--EVDSRSVF 51
++ R++EMEEEA L+++ ++V EM++ P +S L+ +E E D+RSV+
Sbjct: 139 IRARVREMEEEAEKLKKLQSQVDQEMSNTPVLSSPNCSKTSATYNLSEQEKAEADARSVY 198
Query: 52 VGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNES 110
VGNVDY+ T EE++ HF CG++NRVTI +KF G PKG+AY+EF ++V A+ +++S
Sbjct: 199 VGNVDYAATAEELETHFHGCGSINRVTILCNKFDGHPKGFAYIEFADMDSVNTAMAMDDS 258
Query: 111 ELHGRQLKVTVKRTNVPGM 129
GRQ+KV KRTN PG+
Sbjct: 259 LFRGRQIKVNPKRTNKPGI 277
>gi|448101244|ref|XP_004199515.1| Piso0_001296 [Millerozyma farinosa CBS 7064]
gi|359380937|emb|CCE81396.1| Piso0_001296 [Millerozyma farinosa CBS 7064]
Length = 213
Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 93/131 (70%), Gaps = 10/131 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
+++R++EME+EA LR++++K+ E+ + ++ ++++DSRS+++GNVDY T
Sbjct: 50 VQMRMEEMEKEAAKLRELNSKLNTEVDN--------ATSEEKKDIDSRSIYIGNVDYGAT 101
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEAL-HLNESELHGRQLK 118
P E+QQHF CG VNRVTI +KF G PKGYAY+EF +AV +A+ L+ S R++K
Sbjct: 102 PLELQQHFSGCGVVNRVTIPLNKFSGSPKGYAYLEFGDIDAVNKAIATLDGSTFRDREIK 161
Query: 119 VTVKRTNVPGM 129
V+ KRTNVPG+
Sbjct: 162 VSSKRTNVPGL 172
>gi|402217494|gb|EJT97574.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 213
Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/146 (47%), Positives = 84/146 (57%), Gaps = 20/146 (13%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANRE----------------- 43
+K R++ MEEEA LR + A S QD AG A +E
Sbjct: 30 IKARMRLMEEEAATLRSLQADAPVRAPSAQD-GAGTPVPAPKEGEPNGEHEEIQVEGEAQ 88
Query: 44 -EVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAV 101
+VD RSV+VGNVDYS TP ++ HF SCG +NRVTI DKF G PKG+ Y+EF + E V
Sbjct: 89 EDVDKRSVYVGNVDYSATPTDISNHFASCGQINRVTIVCDKFSGHPKGFCYIEFAEPETV 148
Query: 102 QEALHLNESELHGRQLKVTVKRTNVP 127
Q AL LNES L GR + V KRTN+P
Sbjct: 149 QNALLLNESMLCGRIISVVAKRTNIP 174
>gi|323454513|gb|EGB10383.1| hypothetical protein AURANDRAFT_23087 [Aureococcus anophagefferens]
Length = 187
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 82/129 (63%), Gaps = 10/129 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R++EME+EA L+ M ++ E G+ + D RS++VG VDY T
Sbjct: 37 MKRRVQEMEDEAAKLKAMQQELQVET---------GAEAKKENDTDERSIYVGQVDYDAT 87
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HF +CGT+NRVTI DKF G+ KGYAYVEF + +V A+ L+ S GRQLKV
Sbjct: 88 PEELQAHFAACGTINRVTILCDKFTGRSKGYAYVEFEEPASVPTAVLLDNSIFKGRQLKV 147
Query: 120 TVKRTNVPG 128
KRTNVPG
Sbjct: 148 VAKRTNVPG 156
>gi|281209044|gb|EFA83219.1| polyadenylate-binding protein 2 [Polysphondylium pallidum PN500]
Length = 202
Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 62/129 (48%), Positives = 83/129 (64%), Gaps = 13/129 (10%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R KEMEEE L ++ V + ++EE+D+RSV+VGNV+Y+ T
Sbjct: 49 MKRRYKEMEEETKKLNELQNSVD------------SNGFGDQEEIDARSVYVGNVEYTST 96
Query: 61 PEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
E++ +FQSCGTVNR+TI DK G PKG YVEF+ E+VQ AL LN++ + RQ+KV
Sbjct: 97 QEDILAYFQSCGTVNRITILNDKTTGHPKGCCYVEFVDRESVQNALVLNDTTFNNRQIKV 156
Query: 120 TVKRTNVPG 128
T KRTN+P
Sbjct: 157 TAKRTNLPA 165
>gi|449282485|gb|EMC89318.1| Polyadenylate-binding protein 2, partial [Columba livia]
Length = 178
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/182 (41%), Positives = 105/182 (57%), Gaps = 17/182 (9%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
+K R++EME+E L+++ A+ ++S+ + EVD RSV+VGNVDY T
Sbjct: 5 IKARVQEMEKEDERLKKLEAENRFLLSSE------AGLIPKTTEVDQRSVYVGNVDYGST 58
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
EE++ HF SCG VNRVTI DKF G PKGYAY+EF + +V+ A+ L+ES GR +KV
Sbjct: 59 AEELESHFHSCGQVNRVTILCDKFSGHPKGYAYIEFEEKSSVKAAVELDESVFRGRVIKV 118
Query: 120 TVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPM-----RYSP 174
KRTN+PG+ R +Q+RG + + Y G+ PR R M R P
Sbjct: 119 LPKRTNMPGISS--TDRGGYRGCFQARGGLSQ---HGGYYRGQQPRVRGRMYRGRARLLP 173
Query: 175 YY 176
+Y
Sbjct: 174 WY 175
>gi|358340157|dbj|GAA28424.2| polyadenylate-binding protein 2 [Clonorchis sinensis]
Length = 288
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 99/176 (56%), Gaps = 12/176 (6%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
+K R KE+E +A L + SK + S ++ EVD RSV+VGNVDY T
Sbjct: 41 IKERFKEIEADANKLHDLRHLTDKSPVSKTSLSV--LSDEDKAEVDLRSVYVGNVDYGAT 98
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
+E++ HF++CG +NRVTI +K+ GQPKG+AY+EF +AV+ A+ L+ES R LKV
Sbjct: 99 ADELEAHFRACGPINRVTILCNKYTGQPKGFAYIEFDTRDAVEAAMALDESNFRNRALKV 158
Query: 120 TVKRTNVPGMKQ-HRPRRPNPFMVYQSRGAIIPPFLYSPYGYG----KIPRFRMPM 170
KRTNVPGM +RP P+M PF P YG + PR R +
Sbjct: 159 LPKRTNVPGMSMTNRP----PYMRGGRGRGRGMPFGLRPAFYGGGRMRFPRSRCSI 210
>gi|171474005|gb|AAX31042.2| SJCHGC09749 protein [Schistosoma japonicum]
gi|226468246|emb|CAX69800.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
gi|226489703|emb|CAX75002.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
gi|226489705|emb|CAX75003.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
gi|226489707|emb|CAX75004.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
Length = 214
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 93/148 (62%), Gaps = 6/148 (4%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
+K R KE+E +A L + + SK + + S ++ EVD RSV+VGNVDY T
Sbjct: 41 IKERFKEIEADANKLHDLRRVIDKSPISKSNNS--NLSDEDKTEVDLRSVYVGNVDYGST 98
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
+E++ HF+ CG +NRVTI +KF G PKG+AY+EF +AV+ A+ L++S RQLKV
Sbjct: 99 ADELEAHFRGCGPINRVTILCNKFTGHPKGFAYIEFDTRDAVEAAIALDDSSFRSRQLKV 158
Query: 120 TVKRTNVPGMKQHRPRRPNPFMVYQSRG 147
KRTNVPGM RP PF+ ++RG
Sbjct: 159 LPKRTNVPGMSM--TNRP-PFVRGRARG 183
>gi|256071828|ref|XP_002572240.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360043837|emb|CCD81383.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 214
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/149 (44%), Positives = 94/149 (63%), Gaps = 8/149 (5%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
+K R KE+E +A L + + SK + + S ++ EVD RSV+VGNVDY T
Sbjct: 41 IKERFKEIEADANKLHDLRRVIDKSPISKSNNS--NLSDEDKTEVDLRSVYVGNVDYGST 98
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
+E++ HF+ CG +NRVTI +KF G PKG+AY+EF +AV+ A+ L++S RQLKV
Sbjct: 99 ADELEAHFRGCGPINRVTILCNKFTGHPKGFAYIEFDTRDAVEAAIALDDSSFRSRQLKV 158
Query: 120 TVKRTNVPGMK-QHRPRRPNPFMVYQSRG 147
KRTNVPGM +RP PF+ ++RG
Sbjct: 159 LPKRTNVPGMSMTNRP----PFVRGRARG 183
>gi|448113963|ref|XP_004202460.1| Piso0_001296 [Millerozyma farinosa CBS 7064]
gi|359383328|emb|CCE79244.1| Piso0_001296 [Millerozyma farinosa CBS 7064]
Length = 211
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 91/131 (69%), Gaps = 10/131 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
+++R++EME+EA LR++++K+ E+ ++ ++++DSRS++VGNVDY T
Sbjct: 50 VQMRMEEMEKEAAKLRELNSKLNTEV--------DNATSEEKKDIDSRSIYVGNVDYGAT 101
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEAL-HLNESELHGRQLK 118
P E+QQHF CG VNRVTI +KF G PKG+AY+EF +AV +A+ L+ S R++K
Sbjct: 102 PLELQQHFSGCGVVNRVTIPLNKFSGSPKGFAYLEFGDIDAVNKAIATLDGSTFRDREIK 161
Query: 119 VTVKRTNVPGM 129
V KRTNVPG+
Sbjct: 162 VLSKRTNVPGL 172
>gi|336373392|gb|EGO01730.1| hypothetical protein SERLA73DRAFT_70899 [Serpula lacrymans var.
lacrymans S7.3]
Length = 346
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/125 (50%), Positives = 78/125 (62%), Gaps = 4/125 (3%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREE---VDSRSVFVGNVDY 57
MK R++EME EA LR++ A + G + EE DSRSVFVGNVDY
Sbjct: 33 MKQRVEEMEREAKKLRELQAAAETANGGTSTESDSGVPMETEEEKALSDSRSVFVGNVDY 92
Query: 58 SCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 116
TPEE+Q HFQ+CGT+NRVTI DKF G PKGYAYVEF + + + AL ++ S GR
Sbjct: 93 GATPEEIQAHFQACGTINRVTILCDKFTGHPKGYAYVEFAEPDFIDAALAMDNSLFRGRL 152
Query: 117 LKVTV 121
+KV V
Sbjct: 153 IKVGV 157
>gi|406603845|emb|CCH44661.1| hypothetical protein BN7_4230 [Wickerhamomyces ciferrii]
Length = 180
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 84/122 (68%), Gaps = 10/122 (8%)
Query: 7 EMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQ 66
E++++A LR++HA + + + Q+ + ++D+RS++VGNVDY +PEE+Q+
Sbjct: 38 EVDDDAAKLRELHADLAKQESETQEE---------KSDIDARSIYVGNVDYDSSPEELQK 88
Query: 67 HFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTN 125
HFQS G +NRVTI +KF GQPKG+AY+EF + +V +L LN+S GR LKV KRTN
Sbjct: 89 HFQSVGVINRVTILLNKFTGQPKGFAYIEFAEPSSVVNSLVLNDSVFRGRNLKVNPKRTN 148
Query: 126 VP 127
+P
Sbjct: 149 IP 150
>gi|294926226|ref|XP_002779060.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239887927|gb|EER10855.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 242
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/135 (48%), Positives = 88/135 (65%), Gaps = 7/135 (5%)
Query: 1 MKIRLKEMEEEATALRQM--HAKVGNEMASKQDPAAG----GSSLANREEVDSRSVFVGN 54
M+ +++E+E+EA LRQM GN A+ D + A +E D RS++VGN
Sbjct: 63 MQHKIQELEDEAERLRQMTEQGATGNGDATASDHESVEMTPEQQAAQSQEQDRRSIYVGN 122
Query: 55 VDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELH 113
VDY PEE+Q+HF+SCG++ R+TI DK+ G PKG+AY+EF AVQ AL LN++
Sbjct: 123 VDYGSAPEELQEHFKSCGSIQRITIMVDKYSGHPKGFAYIEFGDEAAVQNALLLNDTMFR 182
Query: 114 GRQLKVTVKRTNVPG 128
GRQLKV KRTN+PG
Sbjct: 183 GRQLKVLQKRTNLPG 197
>gi|388582273|gb|EIM22578.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 202
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 85/143 (59%), Gaps = 16/143 (11%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNE---------------MASKQDPAAGGSSLANREEV 45
MK R+K+MEEEA LR++ V + S + + E+V
Sbjct: 29 MKERVKQMEEEAARLREVQENVEQKPEEDQQQQPQQLESQEQSTFEGQDAEMMQESSEDV 88
Query: 46 DSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEA 104
D RSV+VGNVDYS TPE++Q+HF +CGT+NRVTI DKF G PKGYAY+EF + V+ A
Sbjct: 89 DGRSVYVGNVDYSATPEDLQKHFAACGTINRVTILCDKFTGHPKGYAYIEFAEPSLVENA 148
Query: 105 LHLNESELHGRQLKVTVKRTNVP 127
LNES GR +KV KR NVP
Sbjct: 149 SALNESLFKGRLIKVVAKRKNVP 171
>gi|221483800|gb|EEE22112.1| RNA-binding protein, putative [Toxoplasma gondii GT1]
Length = 268
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 71/96 (73%), Gaps = 1/96 (1%)
Query: 35 GGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYV 93
GG A+ +EVD RSV+VGNVDYS TP E+Q+HF+SCGT+NR+TI DK+ G PKGYAY+
Sbjct: 126 GGFPSADSDEVDRRSVYVGNVDYSSTPAELQEHFKSCGTINRITIMVDKYTGHPKGYAYI 185
Query: 94 EFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 129
EF AVQ A+ L+++ RQ+KV KR N+PG
Sbjct: 186 EFNSEAAVQNAILLSDTVFKQRQIKVVAKRKNIPGF 221
>gi|237843899|ref|XP_002371247.1| RNA-binding protein, putative [Toxoplasma gondii ME49]
gi|211968911|gb|EEB04107.1| RNA-binding protein, putative [Toxoplasma gondii ME49]
gi|221504196|gb|EEE29871.1| hypothetical protein TGVEG_008880 [Toxoplasma gondii VEG]
Length = 268
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 71/96 (73%), Gaps = 1/96 (1%)
Query: 35 GGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYV 93
GG A+ +EVD RSV+VGNVDYS TP E+Q+HF+SCGT+NR+TI DK+ G PKGYAY+
Sbjct: 126 GGFPSADSDEVDRRSVYVGNVDYSSTPAELQEHFKSCGTINRITIMVDKYTGHPKGYAYI 185
Query: 94 EFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 129
EF AVQ A+ L+++ RQ+KV KR N+PG
Sbjct: 186 EFNSEAAVQNAILLSDTVFKQRQIKVVAKRKNIPGF 221
>gi|241957093|ref|XP_002421266.1| cytoplasmic RNA-binding protein, putative [Candida dubliniensis
CD36]
gi|223644610|emb|CAX40598.1| cytoplasmic RNA-binding protein, putative [Candida dubliniensis
CD36]
Length = 187
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/138 (45%), Positives = 93/138 (67%), Gaps = 12/138 (8%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREE---VDSRSVFVGNVDY 57
+K ++++ME+EA LR++H+++ E + G + EE D+RS+++GNVDY
Sbjct: 20 VKNKMEQMEQEAAKLRELHSQLSAE-------STNGITHPTDEEKRDADARSIYIGNVDY 72
Query: 58 SCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEAL-HLNESELHGR 115
TP E+QQHF S G VNRVTI T+KF GQ KG+AY+EF+ ++AV +A+ L+ S R
Sbjct: 73 GSTPLELQQHFSSAGVVNRVTILTNKFTGQAKGFAYLEFVDTDAVDKAVATLDGSTFRER 132
Query: 116 QLKVTVKRTNVPGMKQHR 133
QLKV+ KRTN+PG+ R
Sbjct: 133 QLKVSAKRTNIPGISVKR 150
>gi|443895148|dbj|GAC72494.1| splicing factor RNPS1, partial [Pseudozyma antarctica T-34]
Length = 160
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/116 (56%), Positives = 75/116 (64%), Gaps = 6/116 (5%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EME EA LR++ G + P S REEVDSRS++VGNVDY T
Sbjct: 50 MKQRVAEMEAEAAKLRELQQAAGEAGGAGLHP-----SEEEREEVDSRSIYVGNVDYGAT 104
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 115
PEE+QQHFQSCGT+NRVTI DKF G PKGYAYVEF V A+ LNES GR
Sbjct: 105 PEELQQHFQSCGTINRVTILCDKFTGHPKGYAYVEFADPSLVANAMVLNESLFRGR 160
>gi|294933484|ref|XP_002780736.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239890777|gb|EER12531.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 226
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/143 (44%), Positives = 87/143 (60%), Gaps = 24/143 (16%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEV--------------D 46
M+ +++E+E+EA LRQM ++Q G +++ E V D
Sbjct: 49 MQHKIQELEDEAERLRQM---------TEQGATGDGDGVSDHENVEMTAEQQAAQSPEQD 99
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEAL 105
RSV+VG+VDY PEE+Q+HF+SCG + R+TI DK+ G PKG+AY+EF AVQ AL
Sbjct: 100 KRSVYVGSVDYGAAPEELQEHFKSCGPIQRITIMVDKYSGHPKGFAYIEFGDEAAVQNAL 159
Query: 106 HLNESELHGRQLKVTVKRTNVPG 128
LN++ GRQLKV KRTN+PG
Sbjct: 160 LLNDTMFRGRQLKVLQKRTNLPG 182
>gi|389747069|gb|EIM88248.1| hypothetical protein STEHIDRAFT_155598 [Stereum hirsutum FP-91666
SS1]
Length = 457
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 81/122 (66%), Gaps = 4/122 (3%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLA---NREEVDSRSVFVGNVDY 57
MK R++EME EA LR++ A + S + G+ + ++ + DSRS++VGNVDY
Sbjct: 33 MKQRVEEMEREAMKLRELQAAAESADGSSGREGSAGAPMEGDDDKAQADSRSIYVGNVDY 92
Query: 58 SCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 116
+ TPE++Q HFQ+ GT+NRVTI DKF G PKGYAYVEF + E V AL L+ S HGR
Sbjct: 93 AATPEDIQAHFQAAGTINRVTILCDKFTGHPKGYAYVEFAEPEHVDAALALDNSLFHGRL 152
Query: 117 LK 118
+K
Sbjct: 153 IK 154
>gi|313247139|emb|CBY35961.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/131 (46%), Positives = 88/131 (67%), Gaps = 2/131 (1%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEM-ASKQDPAAGGSSLANREEVDSRSVFVGNVDYSC 59
+K R+K MEEEA L+ + ++V ++ A P ++ + E D+RS++VG V+Y+
Sbjct: 42 IKQRVKAMEEEAEKLKALQSEVEQQITADVTSPKINFPTMEEKMETDNRSIYVGQVEYAT 101
Query: 60 TPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLK 118
T EE++QHF CG +NRVTI DKF G PKG+AY+EF + E+V +L L+ S L GRQ+K
Sbjct: 102 TAEELEQHFHGCGALNRVTIICDKFSGHPKGFAYIEFTEKESVDASLALDGSILCGRQIK 161
Query: 119 VTVKRTNVPGM 129
V KRTN PG+
Sbjct: 162 VMPKRTNRPGV 172
>gi|313235350|emb|CBY19695.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/131 (46%), Positives = 88/131 (67%), Gaps = 2/131 (1%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEM-ASKQDPAAGGSSLANREEVDSRSVFVGNVDYSC 59
+K R+K MEEEA L+ + ++V ++ A P ++ + E D+RS++VG V+Y+
Sbjct: 42 IKQRVKAMEEEAEKLKALQSEVEQQITADVTSPKINFPTMEEKMETDNRSIYVGQVEYAT 101
Query: 60 TPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLK 118
T EE++QHF CG +NRVTI DKF G PKG+AY+EF + E+V +L L+ S L GRQ+K
Sbjct: 102 TAEELEQHFHGCGALNRVTIICDKFSGHPKGFAYIEFTEKESVDASLALDGSILCGRQIK 161
Query: 119 VTVKRTNVPGM 129
V KRTN PG+
Sbjct: 162 VMPKRTNRPGV 172
>gi|226470148|emb|CAX70355.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
Length = 214
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 92/148 (62%), Gaps = 6/148 (4%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
+K R KE+E +A L + + SK + + S ++ EVD RSV+VGNVDY T
Sbjct: 41 IKERFKEIEADANKLHDLRRVIDKSPISKSNNS--NLSDEDKTEVDLRSVYVGNVDYGST 98
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
+E++ HF+ CG +NRVTI +KF G PKG+AY+EF +A + A+ L++S RQLKV
Sbjct: 99 ADELEAHFRGCGPINRVTILCNKFTGHPKGFAYIEFDTRDAFEAAIALDDSSFRSRQLKV 158
Query: 120 TVKRTNVPGMKQHRPRRPNPFMVYQSRG 147
KRTNVPGM RP PF+ ++RG
Sbjct: 159 LPKRTNVPGMSM--TNRP-PFVRGRARG 183
>gi|126140476|ref|XP_001386760.1| hypothetical protein PICST_50467 [Scheffersomyces stipitis CBS
6054]
gi|126094044|gb|ABN68731.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 217
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/132 (47%), Positives = 87/132 (65%), Gaps = 13/132 (9%)
Query: 4 RLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREE----VDSRSVFVGNVDYSC 59
RLKEME EA LR++H+++ + GG + +E +DSRSV++GNVDY
Sbjct: 48 RLKEMEREADRLRELHSQLDEQQK-------GGDGIPQTDEEKRDIDSRSVYIGNVDYGS 100
Query: 60 TPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEAL-HLNESELHGRQL 117
TP E+QQHF S G V RVTI T+KF GQPKG+AY+EF + V +A+ L+ + R+L
Sbjct: 101 TPLELQQHFSSAGIVKRVTILTNKFTGQPKGFAYLEFDDVDGVNKAVATLDGTVFRDREL 160
Query: 118 KVTVKRTNVPGM 129
KV+ KRTN+PG+
Sbjct: 161 KVSAKRTNIPGL 172
>gi|336386223|gb|EGO27369.1| hypothetical protein SERLADRAFT_446592 [Serpula lacrymans var.
lacrymans S7.9]
Length = 338
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/124 (49%), Positives = 77/124 (62%), Gaps = 4/124 (3%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREE---VDSRSVFVGNVDY 57
MK R++EME EA LR++ A + G + EE DSRSVFVGNVDY
Sbjct: 33 MKQRVEEMEREAKKLRELQAAAETANGGTSTESDSGVPMETEEEKALSDSRSVFVGNVDY 92
Query: 58 SCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 116
TPEE+Q HFQ+CGT+NRVTI DKF G PKGYAYVEF + + + AL ++ S GR
Sbjct: 93 GATPEEIQAHFQACGTINRVTILCDKFTGHPKGYAYVEFAEPDFIDAALAMDNSLFRGRL 152
Query: 117 LKVT 120
+K +
Sbjct: 153 IKTS 156
>gi|226482504|emb|CAX73851.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
Length = 214
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 92/148 (62%), Gaps = 6/148 (4%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
+K R KE+E +A L + + SK + + S ++ EVD RSV+VGNVDY T
Sbjct: 41 IKERFKEIEADANKLHDLRRVIDKSPISKSNNS--NLSDEDKTEVDLRSVYVGNVDYGST 98
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
+E++ HF+ CG +NRVTI +KF G PKG+AY+EF +AV+ A+ L++S RQLKV
Sbjct: 99 ADELEAHFRGCGPINRVTILCNKFTGHPKGFAYIEFDTRDAVEAAIALDDSSFRSRQLKV 158
Query: 120 TVKRTNVPGMKQHRPRRPNPFMVYQSRG 147
KR NVPGM RP PF+ ++RG
Sbjct: 159 LPKRINVPGMSM--TNRP-PFVRGRARG 183
>gi|443713406|gb|ELU06276.1| hypothetical protein CAPTEDRAFT_174932 [Capitella teleta]
Length = 184
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 84/123 (68%), Gaps = 4/123 (3%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEM---ASKQDPAAGGSSLANREEVDSRSVFVGNVDY 57
+K R+KEMEEEA L++M ++V +M +S SL ++ + D+RS++VGNVDY
Sbjct: 61 IKARVKEMEEEAEKLKEMQSEVEKQMNLSSSSMGSPTPAVSLEDKLDADNRSIWVGNVDY 120
Query: 58 SCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 116
+ T EE++ HF CG VNRVTI DKF G PKG+AYVEF+ ++VQ A L++S GRQ
Sbjct: 121 TATAEELEAHFHGCGCVNRVTILCDKFSGHPKGFAYVEFVDKDSVQTAQALDDSLFKGRQ 180
Query: 117 LKV 119
+KV
Sbjct: 181 IKV 183
>gi|260797827|ref|XP_002593902.1| hypothetical protein BRAFLDRAFT_61143 [Branchiostoma floridae]
gi|229279134|gb|EEN49913.1| hypothetical protein BRAFLDRAFT_61143 [Branchiostoma floridae]
Length = 166
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 61/130 (46%), Positives = 84/130 (64%), Gaps = 8/130 (6%)
Query: 8 MEEEATALRQMHAKVGNEMA---SKQDPAAGGS----SLANREEVDSRSVFVGNVDYSCT 60
MEEEA L++M +V +M + Q P A S+ ++ E D RSV+VGNVDY T
Sbjct: 1 MEEEAEKLKEMQNEVERQMNLSPTAQRPGATAGVAFPSIEDKMEADGRSVYVGNVDYGAT 60
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
EE++ HF CG++NRVTI DKF G PKG+AY+EF ++++ A L++S GRQ+KV
Sbjct: 61 AEELEAHFHGCGSINRVTILCDKFTGHPKGFAYIEFADKDSIETAKALDDSLFRGRQIKV 120
Query: 120 TVKRTNVPGM 129
KRTN PG+
Sbjct: 121 VPKRTNRPGV 130
>gi|313214618|emb|CBY40937.1| unnamed protein product [Oikopleura dioica]
gi|313226203|emb|CBY21346.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 91/135 (67%), Gaps = 6/135 (4%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMA-SKQDPAAGGS----SLANREEVDSRSVFVGNV 55
+K R+K ME EA L+++ ++V ++M+ A+ GS +L + + D+RS+++G V
Sbjct: 36 IKERVKAMEAEAEKLKELQSEVESQMSMGDAGSASMGSANFPTLEEKVDADNRSIYIGQV 95
Query: 56 DYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHG 114
DYS T EE++QHF CG +NRVTI DK+ GQPKG+AY+EF + E+V A+ L+ S
Sbjct: 96 DYSSTAEELEQHFHGCGALNRVTIICDKYSGQPKGFAYIEFTEKESVDAAIALDGSMFRD 155
Query: 115 RQLKVTVKRTNVPGM 129
RQ+KV KRTN PG+
Sbjct: 156 RQIKVMPKRTNKPGV 170
>gi|428671247|gb|EKX72165.1| conserved hypothetical protein [Babesia equi]
Length = 146
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 83/131 (63%), Gaps = 10/131 (7%)
Query: 5 LKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEV 64
+K ++EE +L+ M + +P A + E+VD RSV+VGNVDYS P+E+
Sbjct: 4 IKSLDEELMSLQGM---------TDANPGADDVDMEENEDVDKRSVYVGNVDYSTKPQEL 54
Query: 65 QQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKR 123
Q+ F+S G +NR+TI DK+ G PKGYAY+EF +AV A+ LNES R +KVT KR
Sbjct: 55 QEFFKSSGQINRITIMVDKWTGHPKGYAYIEFSSEDAVNNAVMLNESLFKERIIKVTPKR 114
Query: 124 TNVPGMKQHRP 134
N+PG+ + RP
Sbjct: 115 KNIPGLGRKRP 125
>gi|198438310|ref|XP_002131910.1| PREDICTED: similar to Polyadenylate-binding protein 2
(Poly(A)-binding protein 2) (Poly(A)-binding protein II)
(PABII) (Polyadenylate-binding nuclear protein 1)
(Nuclear poly(A)-binding protein 1) [Ciona intestinalis]
Length = 225
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/134 (47%), Positives = 86/134 (64%), Gaps = 7/134 (5%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS----SLANREEVDSRSVFVGNVD 56
+K R+KEME EA L++M V +M P A + ++ + E DSRSVFVGNVD
Sbjct: 52 IKARVKEMEAEAEKLKEMQNDVEKQMTLS--PPASATFAFPTIEEKVEADSRSVFVGNVD 109
Query: 57 YSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGR 115
Y T EE++QHF G++NRVTI D++ G PKG+AYVEF +E+V+ A L+ + GR
Sbjct: 110 YGATAEELEQHFHGTGSINRVTILCDRYSGHPKGFAYVEFADTESVETATALDGTLFRGR 169
Query: 116 QLKVTVKRTNVPGM 129
QL+V KRTN G+
Sbjct: 170 QLQVNPKRTNKHGI 183
>gi|358056102|dbj|GAA97956.1| hypothetical protein E5Q_04636 [Mixia osmundae IAM 14324]
Length = 203
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 85/147 (57%), Gaps = 18/147 (12%)
Query: 1 MKIRLKEMEEEATALRQMH-----------------AKVGNEMASKQDPAAGGSSLANRE 43
M+ RL+EME E + +M A+ A++ + + RE
Sbjct: 16 MRARLQEMEAERAKIMEMTKASHSAAPVAGSPAVAPAQTSQGQATEDETGDASMTEEERE 75
Query: 44 EVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQ-PKGYAYVEFLQSEAVQ 102
+DSRS++VGNVDY TPEE+QQ F+ CGT+NRVTI DKF + PKG+AYVEF + V
Sbjct: 76 AIDSRSIYVGNVDYGATPEELQQLFKDCGTINRVTILCDKFTRHPKGFAYVEFSEPTFVA 135
Query: 103 EALHLNESELHGRQLKVTVKRTNVPGM 129
A+ +NE+ GR + V KRTNVPGM
Sbjct: 136 NAISMNETLFRGRMILVKAKRTNVPGM 162
>gi|299747315|ref|XP_002911154.1| polyadenylate-binding protein 2 [Coprinopsis cinerea okayama7#130]
gi|298407463|gb|EFI27660.1| polyadenylate-binding protein 2 [Coprinopsis cinerea okayama7#130]
Length = 194
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/128 (50%), Positives = 84/128 (65%), Gaps = 2/128 (1%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R++EME EA LR++ A S++ + + D+RS++VGNVDYS T
Sbjct: 31 MKQRVEEMEREAKKLRELQAAAEASAGSEEP-EGEAGAEDEKAAADARSIYVGNVDYSAT 89
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQ+CG +NRVTI DKF G PKGYAYVEF + E V A+ ++ S GR LKV
Sbjct: 90 PEEIQAHFQACGVINRVTILCDKFTGHPKGYAYVEFAEPEHVDAAVAMDNSLFKGRLLKV 149
Query: 120 TVKRTNVP 127
T KRTN+P
Sbjct: 150 TAKRTNIP 157
>gi|302697041|ref|XP_003038199.1| hypothetical protein SCHCODRAFT_80477 [Schizophyllum commune H4-8]
gi|300111896|gb|EFJ03297.1| hypothetical protein SCHCODRAFT_80477 [Schizophyllum commune H4-8]
Length = 344
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 83/122 (68%), Gaps = 7/122 (5%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREE---VDSRSVFVGNVDY 57
MK R++EME+EA LR+M E AS+ +GG+ + E+ D+RS++VGNVDY
Sbjct: 3 MKQRVEEMEKEAAKLREMQEAA--EKASESG-VSGGAPMDTEEDKTAADNRSIYVGNVDY 59
Query: 58 SCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 116
S TPE++Q HFQ+CGT+NRVTI DKF G PKGYAYVEF + E V A+ ++ S GR
Sbjct: 60 SATPEDIQAHFQACGTINRVTILCDKFTGHPKGYAYVEFAEPEHVDAAVTMDNSLFKGRL 119
Query: 117 LK 118
+K
Sbjct: 120 IK 121
>gi|328873645|gb|EGG22012.1| polyadenylate-binding protein 2 [Dictyostelium fasciculatum]
Length = 243
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/128 (48%), Positives = 81/128 (63%), Gaps = 11/128 (8%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R KE+EEE L+++ + A G ++EE D RSV+VGNV+Y+ T
Sbjct: 62 MKRRYKEIEEETQKLKELQNSL----------EANGGFGGDQEETDGRSVYVGNVEYTST 111
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
EE+ HFQ CGT++R+TI DK G PKG Y+EFL+ EAV AL LNE+ RQ+KV
Sbjct: 112 QEEILLHFQPCGTIHRITILNDKMTGHPKGCCYIEFLEREAVTNALMLNETMFKDRQIKV 171
Query: 120 TVKRTNVP 127
T KRTN+P
Sbjct: 172 TPKRTNLP 179
>gi|256071830|ref|XP_002572241.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360043836|emb|CCD81382.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 223
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 92/155 (59%), Gaps = 11/155 (7%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGN-------EMASKQDPAAGGSSLANREEVDSRSVFVG 53
+K R KE+E +A L + + + S + S ++ EVD RSV+VG
Sbjct: 41 IKERFKEIEADANKLHDLRRVIDKSPISTFRNLFSAAESNNSNLSDEDKTEVDLRSVYVG 100
Query: 54 NVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESEL 112
NVDY T +E++ HF+ CG +NRVTI +KF G PKG+AY+EF +AV+ A+ L++S
Sbjct: 101 NVDYGSTADELEAHFRGCGPINRVTILCNKFTGHPKGFAYIEFDTRDAVEAAIALDDSSF 160
Query: 113 HGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRG 147
RQLKV KRTNVPGM RP PF+ ++RG
Sbjct: 161 RSRQLKVLPKRTNVPGMSM--TNRP-PFVRGRARG 192
>gi|294878913|ref|XP_002768513.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239871063|gb|EER01231.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 196
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/143 (43%), Positives = 86/143 (60%), Gaps = 24/143 (16%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEV--------------D 46
M+ +++E+E+EA LRQM ++Q G +++ E D
Sbjct: 47 MQHKIQELEDEAERLRQM---------TEQGGTGDGDGVSDHENAEMTAEQQAAQSQEQD 97
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEAL 105
RSV+VG+VDY PEE+Q+HF+SCG + R+TI DK+ G PKG+AY+EF AVQ AL
Sbjct: 98 KRSVYVGSVDYGAAPEELQEHFKSCGPIQRITIMVDKYSGHPKGFAYIEFGDEAAVQNAL 157
Query: 106 HLNESELHGRQLKVTVKRTNVPG 128
LN++ GRQLKV KRTN+PG
Sbjct: 158 LLNDTMFRGRQLKVLQKRTNLPG 180
>gi|291190353|ref|NP_001167243.1| Polyadenylate-binding protein 2 [Salmo salar]
gi|223648842|gb|ACN11179.1| Polyadenylate-binding protein 2 [Salmo salar]
Length = 237
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 77/116 (66%), Gaps = 3/116 (2%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
S+ + E D+RS++VGNVDY T EE++ HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 92 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFS 151
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPP 152
E+V+ A+ L+ES GRQ+KV VKRTN PG+ R P ++SRG P
Sbjct: 152 DKESVRTAMALDESLFRGRQIKVGVKRTNRPGISTT--DRGFPRARFRSRGGNFNP 205
>gi|325087930|gb|EGC41240.1| RNP domain-containing protein [Ajellomyces capsulatus H88]
Length = 170
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/110 (52%), Positives = 76/110 (69%), Gaps = 10/110 (9%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EME EA LR+M A + + S ++ ++E++D+RS+FVGNVDY +
Sbjct: 28 MKRRVAEMESEAAKLREMQASLDQQSESLRE---------DKEDIDARSIFVGNVDYGAS 78
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNE 109
PEE+Q HFQSCG++NRVTI DKF G PKGYAYVEF + V +AL LNE
Sbjct: 79 PEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFTEPSLVAQALVLNE 128
>gi|401400261|ref|XP_003880750.1| hypothetical protein NCLIV_011840 [Neospora caninum Liverpool]
gi|325115161|emb|CBZ50717.1| hypothetical protein NCLIV_011840 [Neospora caninum Liverpool]
Length = 285
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 70/95 (73%), Gaps = 1/95 (1%)
Query: 36 GSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVE 94
G + + +EVD RSV+VGNVDYS TP E+Q+HF+SCGT+NR+TI DK+ G PKGYAY+E
Sbjct: 134 GFANTDTDEVDRRSVYVGNVDYSSTPAELQEHFKSCGTINRITIMVDKYTGHPKGYAYIE 193
Query: 95 FLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 129
F AVQ A+ L+++ RQ+KV KR N+PG
Sbjct: 194 FNSEAAVQNAILLSDTVFKQRQIKVVAKRKNIPGF 228
>gi|290984354|ref|XP_002674892.1| predicted protein [Naegleria gruberi]
gi|284088485|gb|EFC42148.1| predicted protein [Naegleria gruberi]
Length = 155
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 80/122 (65%), Gaps = 9/122 (7%)
Query: 8 MEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQH 67
M+EE +++M +++ +++ + N+EE+DSRS++VGNVDY EE++ H
Sbjct: 1 MQEEHAKIKEMQSEIERNLSTVAE---------NQEEIDSRSIYVGNVDYGSVAEELENH 51
Query: 68 FQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVP 127
F+ G + R+TI++DK G PKG+AY+EF +V+ AL LN S R+LKV KRTN+P
Sbjct: 52 FKQAGDIIRITIKSDKMGNPKGFAYIEFKDKSSVENALQLNGSTFRNRELKVFAKRTNIP 111
Query: 128 GM 129
G+
Sbjct: 112 GL 113
>gi|196012776|ref|XP_002116250.1| hypothetical protein TRIADDRAFT_30657 [Trichoplax adhaerens]
gi|190581205|gb|EDV21283.1| hypothetical protein TRIADDRAFT_30657 [Trichoplax adhaerens]
Length = 139
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 70/92 (76%), Gaps = 1/92 (1%)
Query: 41 NREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSE 99
+R E D+RSV+VGNVDY+ T EE++QHF CG+VNRVTI DKF G PKG+AY+EF E
Sbjct: 4 DRAEADARSVYVGNVDYAATAEELEQHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKE 63
Query: 100 AVQEALHLNESELHGRQLKVTVKRTNVPGMKQ 131
+V+ A+ L++S GRQ+KV+ KRTN PG+
Sbjct: 64 SVKTAMALDDSLFRGRQIKVSPKRTNRPGVSS 95
>gi|354488039|ref|XP_003506178.1| PREDICTED: polyadenylate-binding protein 2-like [Cricetulus
griseus]
Length = 333
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 84/148 (56%), Gaps = 13/148 (8%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
SL + E D+RS++VGNVDY T EE++ HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 189 SLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 248
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGMK---------QHRPRRPNPFMVYQSRG 147
E+V+ +L L+ES GRQ+KV KRTN PG+ ++R R N SR
Sbjct: 249 DKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTN---YNSSRS 305
Query: 148 AIIPPFLYSPYGYGKIPRFRMPMRYSPY 175
F P G R R YSPY
Sbjct: 306 RFYSGFNSRPRGRVYRGRARATSWYSPY 333
>gi|351697106|gb|EHB00025.1| Polyadenylate-binding protein 2, partial [Heterocephalus glaber]
Length = 189
Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 84/148 (56%), Gaps = 13/148 (8%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
S+ R E D+RS++VGNVDY T EE++ HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 45 SIEERMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 104
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGMK---------QHRPRRPNPFMVYQSRG 147
E+V+ +L L+ES GRQ+KV KRTN PG+ ++R R N SR
Sbjct: 105 DKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTN---YNSSRS 161
Query: 148 AIIPPFLYSPYGYGKIPRFRMPMRYSPY 175
F P G R R YSPY
Sbjct: 162 RFYSGFNSRPRGRVYRGRARATSWYSPY 189
>gi|66818257|ref|XP_642788.1| polyadenylate-binding protein 2 [Dictyostelium discoideum AX4]
gi|74997256|sp|Q54ZS8.1|PABP2_DICDI RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName:
Full=Poly(A)-binding protein II; Short=PABII
gi|60470900|gb|EAL68872.1| polyadenylate-binding protein 2 [Dictyostelium discoideum AX4]
Length = 222
Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 93/160 (58%), Gaps = 23/160 (14%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSL-------ANREEVDSRSVFVG 53
MK R +EMEEEA L ++ + + + GG+ ++EE+DSRSV+VG
Sbjct: 47 MKKRFREMEEEAKKLTELQNNLESNITGNNGVGIGGNIGGGGGLMNTDQEEIDSRSVYVG 106
Query: 54 NVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESEL 112
NVDY T +++ +FQSCGTVNR+TI +DK G PKG YVEF+ E++ A+ LN+S
Sbjct: 107 NVDYKSTHDQILAYFQSCGTVNRITILSDKTTGHPKGCCYVEFVNKESIINAMALNDSFF 166
Query: 113 HGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPP 152
+ RQLK+T KRTN+P Y R ++PP
Sbjct: 167 NERQLKITPKRTNLP---------------YYMRQGVLPP 191
>gi|399217186|emb|CCF73873.1| unnamed protein product [Babesia microti strain RI]
Length = 145
Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 78/114 (68%), Gaps = 5/114 (4%)
Query: 21 KVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIR 80
++ NE D S +++VD RSV+VGNV+YS TP+ +Q++F+SCG +NR+TI
Sbjct: 18 RLQNETLDSTDRTNDTS----QDDVDRRSVYVGNVEYSATPQNLQEYFKSCGQINRITIM 73
Query: 81 TDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHR 133
DK+ G PKGYAY+EF Q E+V+ AL LNE+ R +KVT KR N+PGM + +
Sbjct: 74 VDKWTGHPKGYAYIEFAQEESVENALLLNETLFKERLIKVTSKRKNIPGMSRSK 127
>gi|149063931|gb|EDM14201.1| poly(A) binding protein, nuclear 1, isoform CRA_c [Rattus
norvegicus]
Length = 194
Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 84/148 (56%), Gaps = 13/148 (8%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
SL + E D+RS++VGNVDY T EE++ HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 50 SLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 109
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGMK---------QHRPRRPNPFMVYQSRG 147
E+V+ +L L+ES GRQ+KV KRTN PG+ ++R R N SR
Sbjct: 110 DKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTN---YNSSRS 166
Query: 148 AIIPPFLYSPYGYGKIPRFRMPMRYSPY 175
F P G R R YSPY
Sbjct: 167 RFYSGFNSRPRGRIYRGRARATSWYSPY 194
>gi|47086087|ref|NP_998424.1| polyadenylate-binding protein nuclear 1 isoform 1 [Danio rerio]
gi|46250394|gb|AAH68437.1| Zgc:85979 [Danio rerio]
gi|50925993|gb|AAH79522.1| Pabpn1 protein [Danio rerio]
gi|182889100|gb|AAI64644.1| Pabpn1 protein [Danio rerio]
Length = 284
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 57/112 (50%), Positives = 74/112 (66%), Gaps = 3/112 (2%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
S+ + E D RS++VGNVDY T EE++ HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 88 SIEEKIEADGRSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFA 147
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGA 148
E+V+ A+ L+ES GRQ+KV KRTN PG+ R P ++SRG
Sbjct: 148 DKESVRTAMALDESLFRGRQIKVGAKRTNRPGIST--TDRGFPRARFRSRGG 197
>gi|291403571|ref|XP_002717950.1| PREDICTED: poly(A) binding protein, nuclear 1-like [Oryctolagus
cuniculus]
Length = 366
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 84/148 (56%), Gaps = 13/148 (8%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
S+ R E D+RS++VGNVDY T EE++ HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 222 SIEERMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 281
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGMK---------QHRPRRPNPFMVYQSRG 147
E+V+ +L L+ES GRQ+KV KRTN PG+ ++R R N SR
Sbjct: 282 DKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTN---YNSSRS 338
Query: 148 AIIPPFLYSPYGYGKIPRFRMPMRYSPY 175
F P G R R YSPY
Sbjct: 339 RFYSGFNSRPRGRIYRGRARATSWYSPY 366
>gi|348577533|ref|XP_003474538.1| PREDICTED: polyadenylate-binding protein 2-like [Cavia porcellus]
Length = 306
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 84/148 (56%), Gaps = 13/148 (8%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
S+ R E D+RS++VGNVDY T EE++ HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 162 SIEERMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 221
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGMK---------QHRPRRPNPFMVYQSRG 147
E+V+ +L L+ES GRQ+KV KRTN PG+ ++R R N SR
Sbjct: 222 DKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTN---YNSSRS 278
Query: 148 AIIPPFLYSPYGYGKIPRFRMPMRYSPY 175
F P G R R YSPY
Sbjct: 279 RFYSGFNSRPRGRVYRGRARATSWYSPY 306
>gi|17505625|ref|NP_492504.1| Protein PABP-2 [Caenorhabditis elegans]
gi|3874370|emb|CAB02750.1| Protein PABP-2 [Caenorhabditis elegans]
Length = 205
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 85/136 (62%), Gaps = 6/136 (4%)
Query: 5 LKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLA----NREEVDSRSVFVGNVDYSCT 60
L E+EEE L+ + ++ M + S + E D++SV+VGNVDY T
Sbjct: 31 LNEIEEEQKKLKAIQNEMVGHMNLNTSSQSNSSQSLLTPEEKAEADAKSVYVGNVDYGAT 90
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
EE++QHF CG+V+RVTI+ D+F G PKG+AYVEF + E +Q AL + +S L GRQ+KV
Sbjct: 91 AEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKEGMQNALAMTDSLLRGRQIKV 150
Query: 120 TVKRTNVPGMK-QHRP 134
KRTN PGM +RP
Sbjct: 151 DPKRTNKPGMSTTNRP 166
>gi|157311739|ref|NP_001098602.1| polyadenylate-binding protein nuclear 1 isoform 2 [Danio rerio]
gi|166158019|ref|NP_001107419.1| uncharacterized protein LOC100135259 [Xenopus (Silurana)
tropicalis]
gi|156914711|gb|AAI52624.1| Pabpn1 protein [Danio rerio]
gi|158253845|gb|AAI54029.1| Poly(A) binding protein, nuclear 1 [Danio rerio]
gi|163915712|gb|AAI57544.1| LOC100135259 protein [Xenopus (Silurana) tropicalis]
Length = 232
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/112 (50%), Positives = 74/112 (66%), Gaps = 3/112 (2%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
S+ + E D RS++VGNVDY T EE++ HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 88 SIEEKIEADGRSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFA 147
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGA 148
E+V+ A+ L+ES GRQ+KV KRTN PG+ R P ++SRG
Sbjct: 148 DKESVRTAMALDESLFRGRQIKVGAKRTNRPGISTT--DRGFPRARFRSRGG 197
>gi|47213059|emb|CAF93812.1| unnamed protein product [Tetraodon nigroviridis]
Length = 220
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 75/112 (66%), Gaps = 3/112 (2%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
S+ + E D+RS++VGNVDY T EE++ HF CG+VNRVTI DK+ G PKG+AY+EF
Sbjct: 88 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFA 147
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGA 148
E+V+ A+ L+ES GRQ+KV KRTN PG+ R P ++SRG
Sbjct: 148 DKESVRTAMALDESLFRGRQIKVVAKRTNRPGIST--TDRGFPRARFRSRGG 197
>gi|315434255|ref|NP_001186793.1| BCL2L2-PABPN1 protein [Homo sapiens]
gi|332223067|ref|XP_003260692.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1 [Nomascus
leucogenys]
gi|338717165|ref|XP_003363601.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2 [Equus
caballus]
gi|397473278|ref|XP_003808142.1| PREDICTED: polyadenylate-binding protein 2 [Pan paniscus]
gi|403264162|ref|XP_003924360.1| PREDICTED: polyadenylate-binding protein 2 [Saimiri boliviensis
boliviensis]
gi|410961928|ref|XP_003987530.1| PREDICTED: polyadenylate-binding protein 2 isoform 3 [Felis catus]
gi|426232740|ref|XP_004010379.1| PREDICTED: polyadenylate-binding protein 2 [Ovis aries]
gi|410267786|gb|JAA21859.1| BCL2L2-PABPN1 readthrough [Pan troglodytes]
gi|417399112|gb|JAA46586.1| Putative splicing factor rnps1 sr protein superfamily [Desmodus
rotundus]
Length = 333
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 84/148 (56%), Gaps = 13/148 (8%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
S+ + E D+RS++VGNVDY T EE++ HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 189 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 248
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGMK---------QHRPRRPNPFMVYQSRG 147
E+V+ +L L+ES GRQ+KV KRTN PG+ ++R R N SR
Sbjct: 249 DKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTN---YNSSRS 305
Query: 148 AIIPPFLYSPYGYGKIPRFRMPMRYSPY 175
F P G R R YSPY
Sbjct: 306 RFYSGFNSRPRGRVYRGRARATSWYSPY 333
>gi|431907175|gb|ELK11241.1| Polyadenylate-binding protein 2 [Pteropus alecto]
Length = 208
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 84/148 (56%), Gaps = 13/148 (8%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
S+ + E D+RS++VGNVDY T EE++ HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 64 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 123
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGMK---------QHRPRRPNPFMVYQSRG 147
E+V+ +L L+ES GRQ+KV KRTN PG+ ++R R N SR
Sbjct: 124 DKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTN---YNSSRS 180
Query: 148 AIIPPFLYSPYGYGKIPRFRMPMRYSPY 175
F P G R R YSPY
Sbjct: 181 RFYSGFNSRPRGRVYRGRARATSWYSPY 208
>gi|440893202|gb|ELR46056.1| Polyadenylate-binding protein 2, partial [Bos grunniens mutus]
Length = 189
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 84/148 (56%), Gaps = 13/148 (8%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
S+ + E D+RS++VGNVDY T EE++ HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 45 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 104
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGMK---------QHRPRRPNPFMVYQSRG 147
E+V+ +L L+ES GRQ+KV KRTN PG+ ++R R N SR
Sbjct: 105 DKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTN---YNSSRS 161
Query: 148 AIIPPFLYSPYGYGKIPRFRMPMRYSPY 175
F P G R R YSPY
Sbjct: 162 RFYSGFNSRPRGRVYRGRARATSWYSPY 189
>gi|9506945|ref|NP_062275.1| polyadenylate-binding protein 2 [Mus musculus]
gi|46396417|sp|Q8CCS6.3|PABP2_MOUSE RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|2351846|gb|AAC00210.1| poly(A) binding protein II [Mus musculus]
gi|33585929|gb|AAH55866.1| Poly(A) binding protein, nuclear 1 [Mus musculus]
gi|148704376|gb|EDL36323.1| poly(A) binding protein, nuclear 1, isoform CRA_b [Mus musculus]
Length = 302
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 84/148 (56%), Gaps = 13/148 (8%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
SL + E D+RS++VGNVDY T EE++ HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 158 SLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 217
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGM---------KQHRPRRPNPFMVYQSRG 147
E+V+ +L L+ES GRQ+KV KRTN PG+ ++R R N SR
Sbjct: 218 DKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRSRYRARTTN---YNSSRS 274
Query: 148 AIIPPFLYSPYGYGKIPRFRMPMRYSPY 175
F P G R R YSPY
Sbjct: 275 RFYSGFNSRPRGRIYRGRARATSWYSPY 302
>gi|149063930|gb|EDM14200.1| poly(A) binding protein, nuclear 1, isoform CRA_b [Rattus
norvegicus]
Length = 184
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/93 (56%), Positives = 68/93 (73%), Gaps = 1/93 (1%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
SL + E D+RS++VGNVDY T EE++ HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 50 SLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 109
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 129
E+V+ +L L+ES GRQ+KV KRTN PG+
Sbjct: 110 DKESVRTSLALDESLFRGRQIKVIPKRTNRPGI 142
>gi|410908757|ref|XP_003967857.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2 [Takifugu
rubripes]
Length = 284
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 74/112 (66%), Gaps = 3/112 (2%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
S + E D+RS++VGNVDY T EE++ HF CG+VNRVTI DK+ G PKG+AY+EF
Sbjct: 88 SFEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFA 147
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGA 148
E+V+ A+ L+ES GRQ+KV KRTN PG+ R P ++SRG
Sbjct: 148 DKESVRTAMALDESLFRGRQIKVVAKRTNRPGISTT--DRGFPRARFRSRGG 197
>gi|410908755|ref|XP_003967856.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1 [Takifugu
rubripes]
Length = 232
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 74/112 (66%), Gaps = 3/112 (2%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
S + E D+RS++VGNVDY T EE++ HF CG+VNRVTI DK+ G PKG+AY+EF
Sbjct: 88 SFEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFA 147
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGA 148
E+V+ A+ L+ES GRQ+KV KRTN PG+ R P ++SRG
Sbjct: 148 DKESVRTAMALDESLFRGRQIKVVAKRTNRPGISTT--DRGFPRARFRSRGG 197
>gi|201860272|ref|NP_001128480.1| polyadenylate-binding protein 2 [Rattus norvegicus]
gi|149063929|gb|EDM14199.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Rattus
norvegicus]
Length = 302
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 84/148 (56%), Gaps = 13/148 (8%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
SL + E D+RS++VGNVDY T EE++ HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 158 SLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 217
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGMK---------QHRPRRPNPFMVYQSRG 147
E+V+ +L L+ES GRQ+KV KRTN PG+ ++R R N SR
Sbjct: 218 DKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTN---YNSSRS 274
Query: 148 AIIPPFLYSPYGYGKIPRFRMPMRYSPY 175
F P G R R YSPY
Sbjct: 275 RFYSGFNSRPRGRIYRGRARATSWYSPY 302
>gi|27807029|ref|NP_776994.1| polyadenylate-binding protein 2 [Bos taurus]
gi|46396285|sp|Q28165.3|PABP2_BOVIN RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|1051125|emb|CAA62006.1| polyA binding protein II [Bos taurus]
gi|126920947|gb|AAI33559.1| Poly(A) binding protein, nuclear 1 [Bos taurus]
gi|296483592|tpg|DAA25707.1| TPA: polyadenylate-binding protein 2 [Bos taurus]
Length = 306
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 84/148 (56%), Gaps = 13/148 (8%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
S+ + E D+RS++VGNVDY T EE++ HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 162 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 221
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGMK---------QHRPRRPNPFMVYQSRG 147
E+V+ +L L+ES GRQ+KV KRTN PG+ ++R R N SR
Sbjct: 222 DKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTN---YNSSRS 278
Query: 148 AIIPPFLYSPYGYGKIPRFRMPMRYSPY 175
F P G R R YSPY
Sbjct: 279 RFYSGFNSRPRGRVYRGRARATSWYSPY 306
>gi|301792821|ref|XP_002931377.1| PREDICTED: polyadenylate-binding protein 2-like [Ailuropoda
melanoleuca]
Length = 178
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 84/148 (56%), Gaps = 13/148 (8%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
S+ + E D+RS++VGNVDY T EE++ HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 34 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 93
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGMK---------QHRPRRPNPFMVYQSRG 147
E+V+ +L L+ES GRQ+KV KRTN PG+ ++R R N SR
Sbjct: 94 DKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTN---YNSSRS 150
Query: 148 AIIPPFLYSPYGYGKIPRFRMPMRYSPY 175
F P G R R YSPY
Sbjct: 151 RFYSGFNSRPRGRVYRGRARATSWYSPY 178
>gi|126010727|gb|AAI33552.1| PABPN1 protein [Bos taurus]
Length = 275
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 84/148 (56%), Gaps = 13/148 (8%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
S+ + E D+RS++VGNVDY T EE++ HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 131 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 190
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGMK---------QHRPRRPNPFMVYQSRG 147
E+V+ +L L+ES GRQ+KV KRTN PG+ ++R R N SR
Sbjct: 191 DKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTN---YNSSRS 247
Query: 148 AIIPPFLYSPYGYGKIPRFRMPMRYSPY 175
F P G R R YSPY
Sbjct: 248 RFYSGFNSRPRGRVYRGRARATSWYSPY 275
>gi|380800735|gb|AFE72243.1| polyadenylate-binding protein 2, partial [Macaca mulatta]
Length = 273
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 84/148 (56%), Gaps = 13/148 (8%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
S+ + E D+RS++VGNVDY T EE++ HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 129 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 188
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGMK---------QHRPRRPNPFMVYQSRG 147
E+V+ +L L+ES GRQ+KV KRTN PG+ ++R R N SR
Sbjct: 189 DKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTN---YNSSRS 245
Query: 148 AIIPPFLYSPYGYGKIPRFRMPMRYSPY 175
F P G R R YSPY
Sbjct: 246 RFYSGFNSRPRGRVYRGRARATSWYSPY 273
>gi|4758876|ref|NP_004634.1| polyadenylate-binding protein 2 [Homo sapiens]
gi|343780920|ref|NP_001230477.1| polyadenylate-binding protein 2 [Sus scrofa]
gi|360039231|ref|NP_001123909.2| polyadenylate-binding protein 2 [Canis lupus familiaris]
gi|114652132|ref|XP_001162168.1| PREDICTED: polyadenylate-binding protein 2 isoform 1 [Pan
troglodytes]
gi|296214561|ref|XP_002753680.1| PREDICTED: polyadenylate-binding protein 2 isoform 2 [Callithrix
jacchus]
gi|395859297|ref|XP_003801976.1| PREDICTED: polyadenylate-binding protein 2 [Otolemur garnettii]
gi|402875708|ref|XP_003901638.1| PREDICTED: polyadenylate-binding protein 2 [Papio anubis]
gi|426376431|ref|XP_004055004.1| PREDICTED: polyadenylate-binding protein 2 [Gorilla gorilla
gorilla]
gi|46403176|sp|Q86U42.3|PABP2_HUMAN RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|2895276|gb|AAC39596.1| poly(A) binding protein II [Homo sapiens]
gi|15012075|gb|AAH10939.1| Poly(A) binding protein, nuclear 1 [Homo sapiens]
gi|119586571|gb|EAW66167.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Homo sapiens]
gi|119586572|gb|EAW66168.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Homo sapiens]
gi|387539310|gb|AFJ70282.1| polyadenylate-binding protein 2 [Macaca mulatta]
Length = 306
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 84/148 (56%), Gaps = 13/148 (8%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
S+ + E D+RS++VGNVDY T EE++ HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 162 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 221
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGMK---------QHRPRRPNPFMVYQSRG 147
E+V+ +L L+ES GRQ+KV KRTN PG+ ++R R N SR
Sbjct: 222 DKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTN---YNSSRS 278
Query: 148 AIIPPFLYSPYGYGKIPRFRMPMRYSPY 175
F P G R R YSPY
Sbjct: 279 RFYSGFNSRPRGRVYRGRARATSWYSPY 306
>gi|26328001|dbj|BAC27741.1| unnamed protein product [Mus musculus]
Length = 292
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/93 (56%), Positives = 68/93 (73%), Gaps = 1/93 (1%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
SL + E D+RS++VGNVDY T EE++ HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 158 SLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 217
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 129
E+V+ +L L+ES GRQ+KV KRTN PG+
Sbjct: 218 DKESVRTSLALDESLFRGRQIKVIPKRTNRPGI 250
>gi|148704375|gb|EDL36322.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Mus musculus]
Length = 294
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/93 (56%), Positives = 68/93 (73%), Gaps = 1/93 (1%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
SL + E D+RS++VGNVDY T EE++ HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 160 SLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 219
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 129
E+V+ +L L+ES GRQ+KV KRTN PG+
Sbjct: 220 DKESVRTSLALDESLFRGRQIKVIPKRTNRPGI 252
>gi|348544129|ref|XP_003459534.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1
[Oreochromis niloticus]
Length = 232
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 74/112 (66%), Gaps = 3/112 (2%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
S+ + E D RS++VGNVDY T EE++ HF CG+VNRVTI DK+ G PKG+AY+EF
Sbjct: 88 SIEEKMEADGRSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFA 147
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGA 148
E+V+ A+ L+ES GRQ+KV KRTN PG+ R P ++SRG
Sbjct: 148 DKESVRTAMALDESLFRGRQIKVGAKRTNRPGISTT--DRGFPRARFRSRGG 197
>gi|348544131|ref|XP_003459535.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2
[Oreochromis niloticus]
Length = 284
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 74/112 (66%), Gaps = 3/112 (2%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
S+ + E D RS++VGNVDY T EE++ HF CG+VNRVTI DK+ G PKG+AY+EF
Sbjct: 88 SIEEKMEADGRSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFA 147
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGA 148
E+V+ A+ L+ES GRQ+KV KRTN PG+ R P ++SRG
Sbjct: 148 DKESVRTAMALDESLFRGRQIKVGAKRTNRPGISTT--DRGFPRARFRSRGG 197
>gi|327287898|ref|XP_003228665.1| PREDICTED: polyadenylate-binding protein 2-like [Anolis
carolinensis]
Length = 196
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/112 (50%), Positives = 75/112 (66%), Gaps = 3/112 (2%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
SL + E D+RS++VGNVDY T EE++ HF CG+VNRVTI DK+ G PKG+AY+EF
Sbjct: 51 SLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFS 110
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGA 148
E+V+ +L L+ES GRQ+KV KRTN PG+ R P Y+ RG+
Sbjct: 111 DKESVRTSLALDESLFRGRQIKVIPKRTNRPGIST--TDRGFPRTRYRGRGS 160
>gi|298706878|emb|CBJ25842.1| similar to Polyadenylate-binding protein 2 (Poly(A)-binding protein
2) (Poly(A)-binding protein II) (PABII)
(Polyadenylate-binding nuclear protein 1) (Nuclear
poly(A)-binding protein 1) [Ectocarpus siliculosus]
Length = 265
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
Query: 46 DSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEA 104
D SV+VG VDY TP+E+Q HF++CGT+NRVTI DKF G+PKGYAY+EF + + A
Sbjct: 121 DESSVYVGQVDYDATPDELQSHFEACGTINRVTILCDKFSGRPKGYAYIEFADKDGSENA 180
Query: 105 LHLNESELHGRQLKVTVKRTNVPGM 129
L L+ S GR LKVT KRTNVPG+
Sbjct: 181 LALDNSPFKGRNLKVTPKRTNVPGL 205
>gi|444728816|gb|ELW69258.1| Bcl-2-like protein 2 [Tupaia chinensis]
Length = 367
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 1/93 (1%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
S+ + E D+RS++VGNVDY T EE++ HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 228 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 287
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 129
E+V+ +L L+ES GRQ+KV KRTN PG+
Sbjct: 288 DKESVRTSLALDESLFRGRQIKVIPKRTNRPGI 320
>gi|148232022|ref|NP_001082057.1| polyadenylate-binding protein 2-A [Xenopus laevis]
gi|82247012|sp|Q9DDY9.1|PAB2A_XENLA RecName: Full=Polyadenylate-binding protein 2-A; Short=PABP-2-A;
Short=Poly(A)-binding protein 2-A; AltName: Full=Nuclear
poly(A)-binding protein 1-A; AltName:
Full=Poly(A)-binding protein II-A; Short=PABII-A;
AltName: Full=Polyadenylate-binding nuclear protein 1-A;
AltName: Full=XLnPABP2-A; AltName: Full=nPABP2-A;
AltName: Full=xPABPII-A
gi|11527140|gb|AAG36902.1|AF257236_1 poly(A) binding protein II [Xenopus laevis]
gi|38641397|gb|AAR26262.1| nuclear poly(A) binding protein 2 [Xenopus laevis]
gi|49257355|gb|AAH73657.1| PABPII protein [Xenopus laevis]
Length = 296
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 1/93 (1%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
S+ + E D+RS++VGNVDY T EE++ HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 153 SVEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFC 212
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 129
E+V+ +L L+ES GRQ+KV KRTN PG+
Sbjct: 213 DKESVRTSLALDESLFRGRQIKVVPKRTNRPGI 245
>gi|345321135|ref|XP_003430388.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2
[Ornithorhynchus anatinus]
Length = 338
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 82/145 (56%), Gaps = 7/145 (4%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
S+ + E D+RS++VGNVDY T EE++ HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 194 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 253
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHR---PR---RPNPFMVYQSRGAII 150
E+V+ ++ L+ES GRQ+KV KRTN PG+ PR R SR
Sbjct: 254 DKESVRTSMALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARFRARATNYSSSRARFY 313
Query: 151 PPFLYSPYGYGKIPRFRMPMRYSPY 175
F P G R R YSPY
Sbjct: 314 SGFNSRPRGRVYRGRARATSWYSPY 338
>gi|417398942|gb|JAA46504.1| Putative splicing factor rnps1 sr protein superfamily [Desmodus
rotundus]
Length = 323
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 1/93 (1%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
S+ + E D+RS++VGNVDY T EE++ HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 189 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 248
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 129
E+V+ +L L+ES GRQ+KV KRTN PG+
Sbjct: 249 DKESVRTSLALDESLFRGRQIKVIPKRTNRPGI 281
>gi|221054742|ref|XP_002258510.1| rna-binding protein [Plasmodium knowlesi strain H]
gi|193808579|emb|CAQ39282.1| rna-binding protein, putative [Plasmodium knowlesi strain H]
Length = 202
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 105/175 (60%), Gaps = 20/175 (11%)
Query: 5 LKEMEEEATALRQMHAKVGNEMASKQDPAAGG--SSLANREEVDSRSVFVGNVDYSCTPE 62
+ +++E + L+++ K+ NE A Q +GG S +EE+++RS+FVGNVDYS PE
Sbjct: 28 ISTIDKEFSDLQKL--KMMNEGADMQMNHSGGLDSHEMEQEEINNRSIFVGNVDYSTQPE 85
Query: 63 EVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 121
E+Q F CG +NRVTI +K G KGYAY+EF + +V+ AL L+ES RQ+KV
Sbjct: 86 ELQSLFSECGLINRVTILVNKNTGHSKGYAYIEFADASSVRTALSLSESFFKKRQIKVCS 145
Query: 122 KRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 176
KR N+PG +RP R +PF RG I P ++P G + P FR P+Y
Sbjct: 146 KRRNIPGF--NRP-RISPF-----RGRSIKP-SFAPRGRLRQPSFR------PFY 185
>gi|297297505|ref|XP_001107287.2| PREDICTED: polyadenylate-binding protein 2-like isoform 2 [Macaca
mulatta]
Length = 355
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 1/93 (1%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
S+ + E D+RS++VGNVDY T EE++ HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 221 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 280
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 129
E+V+ +L L+ES GRQ+KV KRTN PG+
Sbjct: 281 DKESVRTSLALDESLFRGRQIKVIPKRTNRPGI 313
>gi|297694743|ref|XP_002824624.1| PREDICTED: polyadenylate-binding protein 2 isoform 1 [Pongo abelii]
Length = 296
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 1/93 (1%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
S+ + E D+RS++VGNVDY T EE++ HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 162 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 221
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 129
E+V+ +L L+ES GRQ+KV KRTN PG+
Sbjct: 222 DKESVRTSLALDESLFRGRQIKVIPKRTNRPGI 254
>gi|194374387|dbj|BAG57089.1| unnamed protein product [Homo sapiens]
Length = 168
Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 1/93 (1%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
S+ + E D+RS++VGNVDY T EE++ HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 34 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 93
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 129
E+V+ +L L+ES GRQ+KV KRTN PG+
Sbjct: 94 DKESVRTSLALDESLFRGRQIKVIPKRTNRPGI 126
>gi|281353092|gb|EFB28676.1| hypothetical protein PANDA_022375 [Ailuropoda melanoleuca]
Length = 152
Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 1/93 (1%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
S+ + E D+RS++VGNVDY T EE++ HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 20 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 79
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 129
E+V+ +L L+ES GRQ+KV KRTN PG+
Sbjct: 80 DKESVRTSLALDESLFRGRQIKVIPKRTNRPGI 112
>gi|126717485|gb|AAI33469.1| PABPN1 protein [Bos taurus]
Length = 296
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 1/93 (1%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
S+ + E D+RS++VGNVDY T EE++ HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 162 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 221
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 129
E+V+ +L L+ES GRQ+KV KRTN PG+
Sbjct: 222 DKESVRTSLALDESLFRGRQIKVIPKRTNRPGI 254
>gi|147907300|ref|NP_001080719.1| polyadenylate-binding protein 2-B [Xenopus laevis]
gi|82241535|sp|Q7ZXB8.1|PAB2B_XENLA RecName: Full=Polyadenylate-binding protein 2-B; Short=PABP-2-B;
Short=Poly(A)-binding protein 2-B; AltName: Full=Nuclear
poly(A)-binding protein 1-B; AltName:
Full=Poly(A)-binding protein II-B; Short=PABII-B;
AltName: Full=Polyadenylate-binding nuclear protein 1-B;
AltName: Full=XLnPABP2-B; AltName: Full=nPABP2-B;
AltName: Full=xPABPII-B
gi|27924235|gb|AAH45063.1| Pabpn1-prov protein [Xenopus laevis]
Length = 295
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 1/93 (1%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
S+ + E D+RS++VGNVDY T EE++ HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 152 SVEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFS 211
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 129
E+V+ +L L+ES GRQ+KV KRTN PG+
Sbjct: 212 DKESVRTSLALDESLFRGRQIKVVPKRTNRPGI 244
>gi|417409281|gb|JAA51155.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Desmodus rotundus]
Length = 278
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 1/93 (1%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
S+ + E D+RS++VGNVDY T EE++ HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 144 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 203
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 129
E+V+ +L L+ES GRQ+KV KRTN PG+
Sbjct: 204 DKESVRTSLALDESLFRGRQIKVIPKRTNRPGI 236
>gi|28193136|emb|CAD62310.1| unnamed protein product [Homo sapiens]
Length = 298
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 1/93 (1%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
S+ + E D+RS++VGNVDY T EE++ HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 164 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 223
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 129
E+V+ +L L+ES GRQ+KV KRTN PG+
Sbjct: 224 DKESVRTSLALDESLFRGRQIKVIPKRTNRPGI 256
>gi|349803921|gb|AEQ17433.1| putative poly binding nuclear 1 [Hymenochirus curtipes]
Length = 255
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 50/93 (53%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
S+ + E D+RS++VGNVDY T EE++ HF CG+VNRVTI DK+ G PKG+AY+EF
Sbjct: 124 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFS 183
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 129
+ E+V+ ++ L+ES GRQ+KV KRTN PG+
Sbjct: 184 EKESVRTSMALDESLFRGRQIKVGAKRTNKPGI 216
>gi|147899481|ref|NP_001084418.1| embryonic polyadenylate-binding protein 2-B [Xenopus laevis]
gi|82238228|sp|Q6TY21.1|EPA2B_XENLA RecName: Full=Embryonic polyadenylate-binding protein 2-B;
Short=Embryonic poly(A)-binding protein 2-B;
Short=XePABP2-B; Short=ePABP-2B; Short=ePABP2-B;
AltName: Full=Embryonic poly(A)-binding protein type
II-B
gi|38641399|gb|AAR26263.1| embryonic poly(A) binding protein 2 [Xenopus laevis]
Length = 218
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 90/146 (61%), Gaps = 17/146 (11%)
Query: 1 MKIRLKEMEEEATALRQMHAK---VGNE----MASKQDPAAGGS---------SLANREE 44
+++R++EMEEEA L+ + + +G M + G+ S ++E
Sbjct: 30 IRMRVREMEEEAERLKGLSGQDKSIGVSTRPCMQTTHSKMTAGAYTEGPPQPLSAEEKKE 89
Query: 45 VDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQE 103
+D RSV+VGNVDY T ++++ HF SCG++NR+TI DKF G PKGYAY+EF + +V
Sbjct: 90 IDKRSVYVGNVDYGSTAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDA 149
Query: 104 ALHLNESELHGRQLKVTVKRTNVPGM 129
A+ ++E+ GR +KV KRTN+PG+
Sbjct: 150 AVAMDETVFRGRTIKVLPKRTNMPGI 175
>gi|341898366|gb|EGT54301.1| hypothetical protein CAEBREN_10290 [Caenorhabditis brenneri]
Length = 223
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 69/95 (72%), Gaps = 2/95 (2%)
Query: 42 REEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEA 100
+ E D++SV+VGNVDY T EE++QHF CG+V RVTI DKF G PKG+AYVEF + +
Sbjct: 90 KAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVARVTILCDKFSGHPKGFAYVEFTEKDG 149
Query: 101 VQEALHLNESELHGRQLKVTVKRTNVPGMK-QHRP 134
+Q AL + +S L GRQ+KV KRTN PG+ +RP
Sbjct: 150 MQNALAMTDSLLRGRQIKVDQKRTNRPGLSTTNRP 184
>gi|344299871|gb|EGW30224.1| hypothetical protein SPAPADRAFT_144523 [Spathaspora passalidarum
NRRL Y-27907]
Length = 217
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 81/123 (65%), Gaps = 11/123 (8%)
Query: 12 ATALRQMHAKVGNEMASKQDPAAGGSSLANREE---VDSRSVFVGNVDYSCTPEEVQQHF 68
A LR++H+++ N D A G + EE VD+RS+++GNVDY TP E+QQHF
Sbjct: 61 AAKLRELHSQLSN------DTAMSGITPQTDEEKRDVDARSIYIGNVDYGSTPLELQQHF 114
Query: 69 QSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEAL-HLNESELHGRQLKVTVKRTNV 126
SCG VNRVTI +K GQPKG+AY+EF + V +A+ L+ S RQLKV+ KRTN+
Sbjct: 115 SSCGIVNRVTILMNKHTGQPKGFAYLEFADVDGVNKAVATLDGSMFRDRQLKVSAKRTNI 174
Query: 127 PGM 129
PG+
Sbjct: 175 PGI 177
>gi|341895192|gb|EGT51127.1| hypothetical protein CAEBREN_00953 [Caenorhabditis brenneri]
Length = 205
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 69/95 (72%), Gaps = 2/95 (2%)
Query: 42 REEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEA 100
+ E D++SV+VGNVDY T EE++QHF CG+V RVTI DKF G PKG+AYVEF + +
Sbjct: 72 KAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVARVTILCDKFSGHPKGFAYVEFTEKDG 131
Query: 101 VQEALHLNESELHGRQLKVTVKRTNVPGMK-QHRP 134
+Q AL + +S L GRQ+KV KRTN PG+ +RP
Sbjct: 132 MQNALAMTDSLLRGRQIKVDQKRTNRPGLSTTNRP 166
>gi|353235207|emb|CCA67223.1| related to poly(a) binding protein II [Piriformospora indica DSM
11827]
Length = 173
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 63/87 (72%), Gaps = 1/87 (1%)
Query: 34 AGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAY 92
A G+ + ++ D+RS++VGNVDY TPEE+Q HF SCGT+NRVTI DKF G PKGYAY
Sbjct: 76 ASGADFSTDDDADARSIYVGNVDYGATPEEIQAHFASCGTINRVTILLDKFTGHPKGYAY 135
Query: 93 VEFLQSEAVQEALHLNESELHGRQLKV 119
VEF Q V+ AL LNES GR +KV
Sbjct: 136 VEFAQPAHVEAALVLNESLFRGRLIKV 162
>gi|213623852|gb|AAI70311.1| LOC403372 protein [Xenopus laevis]
Length = 218
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 90/146 (61%), Gaps = 17/146 (11%)
Query: 1 MKIRLKEMEEEATALRQMHAK---VGNE----MASKQDPAAGGS---------SLANREE 44
+++R++EMEEEA L+ + + +G M + G+ S ++E
Sbjct: 30 IRMRVREMEEEAERLKGLSGQDKSIGVSTRPCMQTTHSKMTAGAYTEGPPQTLSAEEKKE 89
Query: 45 VDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQE 103
+D RSV+VGNVDY T ++++ HF SCG++NR+TI DKF G PKGYAY+EF + +V
Sbjct: 90 IDKRSVYVGNVDYGSTAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDA 149
Query: 104 ALHLNESELHGRQLKVTVKRTNVPGM 129
A+ ++E+ GR +KV KRTN+PG+
Sbjct: 150 AVAMDETVFRGRTIKVLPKRTNMPGI 175
>gi|213626875|gb|AAI70309.1| Embryonic poly(A) binding protein 2 [Xenopus laevis]
Length = 218
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 90/146 (61%), Gaps = 17/146 (11%)
Query: 1 MKIRLKEMEEEATALRQMHAK---VGNE----MASKQDPAAGGS---------SLANREE 44
+++R++EMEEEA L+ + + +G M + G+ S ++E
Sbjct: 30 IRMRVREMEEEAERLKGLSGQDKSIGVSTRPCMQTTHSKMTAGAYTEGPPQPLSAEEKKE 89
Query: 45 VDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQE 103
+D RSV+VGNVDY T ++++ HF SCG++NR+TI DKF G PKGYAY+EF + +V
Sbjct: 90 IDKRSVYVGNVDYGSTAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDA 149
Query: 104 ALHLNESELHGRQLKVTVKRTNVPGM 129
A+ ++E+ GR +KV KRTN+PG+
Sbjct: 150 AVAMDETVFRGRTIKVLPKRTNMPGI 175
>gi|308494172|ref|XP_003109275.1| CRE-PABP-2 protein [Caenorhabditis remanei]
gi|308246688|gb|EFO90640.1| CRE-PABP-2 protein [Caenorhabditis remanei]
Length = 205
Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 69/95 (72%), Gaps = 2/95 (2%)
Query: 42 REEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEA 100
+ E D++SV+VGNVDY T EE++QHF CG+V RVTI DKF G PKG+AYVEF + +
Sbjct: 72 KAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVARVTILCDKFSGHPKGFAYVEFTEKDG 131
Query: 101 VQEALHLNESELHGRQLKVTVKRTNVPGMKQ-HRP 134
+Q AL + +S L GRQ+KV KRTN PG+ +RP
Sbjct: 132 MQNALAMTDSLLRGRQIKVDPKRTNRPGLSSTNRP 166
>gi|268564716|ref|XP_002639198.1| C. briggsae CBR-PABP-2 protein [Caenorhabditis briggsae]
Length = 205
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 69/95 (72%), Gaps = 2/95 (2%)
Query: 42 REEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEA 100
+ E D++SV+VGNVDY T EE++QHF CG+V RVTI DKF G PKG+AYVEF + +
Sbjct: 72 KAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVARVTILCDKFSGHPKGFAYVEFTEKDG 131
Query: 101 VQEALHLNESELHGRQLKVTVKRTNVPGMK-QHRP 134
+Q AL + +S L GRQ+KV KRTN PG+ +RP
Sbjct: 132 MQNALAMTDSLLRGRQIKVDPKRTNRPGLSTTNRP 166
>gi|47575772|ref|NP_001001230.1| polyadenylate-binding protein 2 [Xenopus (Silurana) tropicalis]
gi|82237242|sp|Q6NVP7.1|PABP2_XENTR RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|45708904|gb|AAH67958.1| poly(A) binding protein, nuclear 1 [Xenopus (Silurana) tropicalis]
gi|89268254|emb|CAJ82538.1| poly(A) binding protein, nuclear 1 [Xenopus (Silurana) tropicalis]
Length = 296
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 68/93 (73%), Gaps = 1/93 (1%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
S+ + E D+RS++VGNVDY T EE++ HF CG+VNRVTI DK+ G PKG+AY+EF
Sbjct: 153 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFS 212
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 129
E+V+ +L L+ES GRQ+KV KRTN PG+
Sbjct: 213 DKESVRTSLALDESLFRGRQIKVVPKRTNRPGI 245
>gi|344302535|gb|EGW32809.1| hypothetical protein SPAPADRAFT_60154 [Spathaspora passalidarum
NRRL Y-27907]
Length = 171
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 75/107 (70%), Gaps = 2/107 (1%)
Query: 27 ASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-G 85
++ Q LA +EE+DSRS++VGNVDY TPE+++Q F G + RVTI D+F G
Sbjct: 12 SNSQSDVDNAEKLAKQEEIDSRSIYVGNVDYQSTPEQLEQFFHVVGIIERVTILFDRFSG 71
Query: 86 QPKGYAYVEFLQSEAVQEAL-HLNESELHGRQLKVTVKRTNVPGMKQ 131
PKGYAY+EF +S +VQ+A+ LN E GR+L+VT KRTN+PG ++
Sbjct: 72 LPKGYAYIEFEKSVSVQQAIDELNGKEFRGRELRVTSKRTNLPGFRK 118
>gi|358009812|pdb|3UCG|A Chain A, Crystal Structure Of A Rna Binding Domain Of Hypothetical
Polyadenylate-Binding Protein (Pabpn1) From Homo Sapiens
At 1.95 A Resolution
Length = 89
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 65/87 (74%), Gaps = 1/87 (1%)
Query: 44 EVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 102
E D+RS++VGNVDY T EE++ HF CG+VNRVTI DKF G PKG+AY+EF E+V+
Sbjct: 3 EADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVR 62
Query: 103 EALHLNESELHGRQLKVTVKRTNVPGM 129
+L L+ES GRQ+KV KRTN PG+
Sbjct: 63 TSLALDESLFRGRQIKVIPKRTNRPGI 89
>gi|165761289|pdb|3B4D|A Chain A, Crystal Structure Of Human Pabpn1 Rrm
gi|165761291|pdb|3B4M|A Chain A, Crystal Structure Of Human Pabpn1 Rrm
gi|165761292|pdb|3B4M|B Chain B, Crystal Structure Of Human Pabpn1 Rrm
gi|165761293|pdb|3B4M|C Chain C, Crystal Structure Of Human Pabpn1 Rrm
gi|165761294|pdb|3B4M|D Chain D, Crystal Structure Of Human Pabpn1 Rrm
Length = 96
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 65/87 (74%), Gaps = 1/87 (1%)
Query: 44 EVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 102
E D+RS++VGNVDY T EE++ HF CG+VNRVTI DKF G PKG+AY+EF E+V+
Sbjct: 2 EADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVR 61
Query: 103 EALHLNESELHGRQLKVTVKRTNVPGM 129
+L L+ES GRQ+KV KRTN PG+
Sbjct: 62 TSLALDESLFRGRQIKVIPKRTNRPGI 88
>gi|255731418|ref|XP_002550633.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240131642|gb|EER31201.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 203
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/131 (46%), Positives = 88/131 (67%), Gaps = 14/131 (10%)
Query: 4 RLKEMEEEATALR-QMHAKVGNEMASKQDPAAGGSSLAN--REEVDSRSVFVGNVDYSCT 60
+++++E+EA LR Q+ A+ N G S L + + + DSRS+++GNVDY
Sbjct: 36 KMEQVEQEAAKLREQLQAESTNN---------GVSFLTDEQKRDSDSRSIYIGNVDYGTL 86
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALH-LNESELHGRQLK 118
P E+QQHF S G V+RVTI TDK GQ KG+AY+EF+ +E+VQ+A+ L+ S RQLK
Sbjct: 87 PIELQQHFSSAGVVSRVTIMTDKITGQAKGFAYLEFVDAESVQKAVDTLDGSTFRERQLK 146
Query: 119 VTVKRTNVPGM 129
V+ KRTN+PG+
Sbjct: 147 VSAKRTNIPGI 157
>gi|167517171|ref|XP_001742926.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778025|gb|EDQ91640.1| predicted protein [Monosiga brevicollis MX1]
Length = 95
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 67/90 (74%), Gaps = 1/90 (1%)
Query: 41 NREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSE 99
+REEVD+RS++VGNV+Y+ T EE+Q F+ CG V R+ I DKF G PKG+ YVEF +
Sbjct: 4 SREEVDARSIYVGNVEYAATEEEIQALFKDCGVVKRIKIMRDKFTGHPKGFCYVEFAEPN 63
Query: 100 AVQEALHLNESELHGRQLKVTVKRTNVPGM 129
AV A+ L+ES HGRQ+KV KRTN+PG+
Sbjct: 64 AVPLAMALDESMFHGRQIKVKSKRTNLPGL 93
>gi|268536830|ref|XP_002633550.1| Hypothetical protein CBG05418 [Caenorhabditis briggsae]
Length = 181
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 78/122 (63%), Gaps = 5/122 (4%)
Query: 7 EMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQ 66
E+E EA LR + K+ +MA+K P + ++E+D+RSVFVGNVD+ T E+Q
Sbjct: 12 EIEAEAAVLRDIQNKMAEKMAAKTVP----QTAEEQKEIDARSVFVGNVDFGSTIAEIQD 67
Query: 67 HFQSCGTVNRVTIRTDKFGQ-PKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTN 125
HF+ CG + R TI DKF + K +AY+EF SE+++ AL +N S RQ+ VT KRTN
Sbjct: 68 HFKGCGVIVRTTIPKDKFTKRQKNFAYIEFESSESIENALVMNGSLFRARQIVVTAKRTN 127
Query: 126 VP 127
VP
Sbjct: 128 VP 129
>gi|148227694|ref|NP_001082505.1| embryonic polyadenylate-binding protein 2-A [Xenopus laevis]
gi|82241899|sp|Q804A5.1|EPA2A_XENLA RecName: Full=Embryonic polyadenylate-binding protein 2-A;
Short=Embryonic poly(A)-binding protein 2-A;
Short=XePABP2-A; Short=ePABP-2A; Short=ePABP2-A;
AltName: Full=Embryonic poly(A)-binding protein type
II-A; AltName: Full=PABPN2; AltName: Full=p32
gi|28273596|gb|AAO33927.1| putative polyA-binding protein PABPN2/ePABP2 [Xenopus laevis]
Length = 218
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 89/155 (57%), Gaps = 35/155 (22%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS----------------------- 37
+++R++EMEEEA L+ + S QD + G S
Sbjct: 30 IRMRVREMEEEAERLKGL---------SGQDKSIGVSPRPCMKLIHSKMTAGEYTEGPPR 80
Query: 38 --SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVE 94
S ++E+D RSV+VGNVDY T ++++ HF SCG++NR+TI DKF G PKGYAY+E
Sbjct: 81 PLSAEEKKEIDKRSVYVGNVDYGGTAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIE 140
Query: 95 FLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 129
F + +V A+ ++E+ GR +KV KRTN+PG+
Sbjct: 141 FAERNSVDAAVTMDETVFRGRTIKVLPKRTNMPGI 175
>gi|219120225|ref|XP_002180856.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407572|gb|EEC47508.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 97
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 46 DSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEA 104
D+ S++VG VDYS TPEE+ HF++CGTV RVTI DKF G+PKG+AY+EF +V+ A
Sbjct: 1 DNYSIYVGQVDYSTTPEELLAHFEACGTVERVTIVCDKFTGKPKGFAYLEFENESSVENA 60
Query: 105 LHLNESELHGRQLKVTVKRTNVPGM 129
L L+ESE GRQLK+T KR N PGM
Sbjct: 61 LKLDESEFKGRQLKITHKRVNQPGM 85
>gi|395503056|ref|XP_003755889.1| PREDICTED: polyadenylate-binding protein 2 [Sarcophilus harrisii]
Length = 333
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 68/93 (73%), Gaps = 1/93 (1%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
S+ + E D+RS++VGNVDY T EE++ HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 189 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 248
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 129
++V+ ++ L++S GRQ+KV KRTN PG+
Sbjct: 249 DKDSVRTSMALDDSLFRGRQIKVIPKRTNRPGI 281
>gi|345307423|ref|XP_001512125.2| PREDICTED: embryonic polyadenylate-binding protein 2-like
[Ornithorhynchus anatinus]
Length = 412
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Query: 44 EVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 102
E D+RSV+VGNVDY T EE++ HF SCG +NRVTI DKF G PKGYAY+EF +V+
Sbjct: 152 EADNRSVYVGNVDYGGTAEELESHFNSCGEINRVTILCDKFSGHPKGYAYIEFASESSVK 211
Query: 103 EALHLNESELHGRQLKVTVKRTNVPGM 129
A+ L+ES GR +KV KRTN+PG+
Sbjct: 212 AAVDLDESTFRGRIIKVLPKRTNMPGI 238
>gi|126277431|ref|XP_001369327.1| PREDICTED: polyadenylate-binding protein 2-like [Monodelphis
domestica]
Length = 306
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 68/93 (73%), Gaps = 1/93 (1%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
S+ + E D+RS++VGNVDY T EE++ HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 162 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 221
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 129
++V+ ++ L++S GRQ+KV KRTN PG+
Sbjct: 222 DKDSVRTSMALDDSLFRGRQIKVIPKRTNRPGI 254
>gi|397625742|gb|EJK67902.1| hypothetical protein THAOC_10991, partial [Thalassiosira oceanica]
Length = 525
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/133 (46%), Positives = 82/133 (61%), Gaps = 7/133 (5%)
Query: 1 MKIRLKEMEEEATALRQM-----HAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNV 55
++ + MEEEA + Q +K G A+K D + ++ A+ + D SV+VG V
Sbjct: 350 LQAEIARMEEEAARIAQETEDLEKSKDGGTDAAKSDESKTAAA-ADGTKKDGHSVYVGQV 408
Query: 56 DYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHG 114
DYS TPEE+ HF+SCGTV RVTI DKF G+PKG+AY+EF AV+ A+ L+ S
Sbjct: 409 DYSSTPEELLAHFESCGTVERVTIVCDKFTGKPKGFAYLEFQNESAVENAIKLDGSTFKE 468
Query: 115 RQLKVTVKRTNVP 127
RQLKVT KR N P
Sbjct: 469 RQLKVTPKRVNDP 481
>gi|62858583|ref|NP_001016352.1| poly(A) binding protein, nuclear 1-like (cytoplasmic) [Xenopus
(Silurana) tropicalis]
gi|89266764|emb|CAJ81799.1| poly(A) binding protein, nuclear 1 [Xenopus (Silurana) tropicalis]
gi|111305754|gb|AAI21547.1| poly(A) binding protein, nuclear 1 [Xenopus (Silurana) tropicalis]
Length = 218
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 90/148 (60%), Gaps = 21/148 (14%)
Query: 1 MKIRLKEMEEEATALRQM------------------HAKVGNEMASKQDPAAGGSSLANR 42
+++R++EMEEEA L+ + H+K+ ++ P S +
Sbjct: 30 IRMRVREMEEEAERLKGLSGEDKSIGVSSRPCMKLIHSKMTAGAYTEGPPRP--LSAEEK 87
Query: 43 EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAV 101
+E+D RSV+VGNVDY T ++++ HF SCG++NR+TI DKF G PKGYAY+EF + +V
Sbjct: 88 KEIDKRSVYVGNVDYGGTAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSV 147
Query: 102 QEALHLNESELHGRQLKVTVKRTNVPGM 129
A+ ++E+ GR +KV KRTN+PG+
Sbjct: 148 DVAVAMDETVFRGRTIKVLPKRTNMPGI 175
>gi|85000163|ref|XP_954800.1| RNA poly(A)-binding protein [Theileria annulata strain Ankara]
gi|65302946|emb|CAI75324.1| RNA poly(A)-binding protein, putative [Theileria annulata]
Length = 176
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 77/126 (61%), Gaps = 10/126 (7%)
Query: 4 RLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEE 63
RL +++E L+Q+ +M + N E+VD RS++VGNVDYS P+E
Sbjct: 7 RLTVLDDE---LKQLQGMTDCQMLTDD------MDTDNNEDVDKRSIYVGNVDYSTKPQE 57
Query: 64 VQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVK 122
+Q+ F+S G +NR+TI DK+ G PKGYAYVEF +AV A+ LNES R +KV K
Sbjct: 58 LQEFFKSSGQINRITIMVDKYTGHPKGYAYVEFSNEDAVNNAIMLNESLFKERIIKVIPK 117
Query: 123 RTNVPG 128
R N+PG
Sbjct: 118 RKNIPG 123
>gi|341904125|gb|EGT59958.1| hypothetical protein CAEBREN_16301 [Caenorhabditis brenneri]
Length = 336
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 65/89 (73%), Gaps = 1/89 (1%)
Query: 42 REEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQ-PKGYAYVEFLQSEA 100
+ E D++SV+VGNVDY T EE++QHF CG+V RVTI DKF + PKG+AYVEF + +
Sbjct: 72 KAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVARVTILCDKFSRHPKGFAYVEFTEKDG 131
Query: 101 VQEALHLNESELHGRQLKVTVKRTNVPGM 129
+Q AL + +S L GRQ+KV KR N PG+
Sbjct: 132 MQNALAMTDSLLRGRQIKVDQKRANRPGL 160
>gi|159794905|pdb|2JWN|A Chain A, Solution Nmr Structure Of The Protease-Resistent Domain Of
Xenopus Laevis Epabp2
gi|159794906|pdb|2JWN|B Chain B, Solution Nmr Structure Of The Protease-Resistent Domain Of
Xenopus Laevis Epabp2
Length = 124
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 68/93 (73%), Gaps = 1/93 (1%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
S ++E+D RSV+VGNVDY T ++++ HF SCG++NR+TI DKF G PKGYAY+EF
Sbjct: 27 SAEEKKEIDKRSVYVGNVDYGSTAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFA 86
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 129
+ +V A+ ++E+ GR +KV KRTN+PG+
Sbjct: 87 ERNSVDAAVAMDETVFRGRTIKVLPKRTNMPGI 119
>gi|395508493|ref|XP_003758545.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Sarcophilus
harrisii]
Length = 384
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Query: 44 EVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 102
E D RSV+VGNVDYS T EE++ HF CG +NRVTI DK+ G PKGYAY+EF ++V+
Sbjct: 165 EADHRSVYVGNVDYSGTAEELESHFNCCGEINRVTILCDKYSGHPKGYAYIEFAYKDSVK 224
Query: 103 EALHLNESELHGRQLKVTVKRTNVPGM 129
A+ L+E+ GR +KV KRTN+PG+
Sbjct: 225 TAMDLDETTFRGRIIKVLPKRTNLPGI 251
>gi|330846765|ref|XP_003295173.1| hypothetical protein DICPUDRAFT_24800 [Dictyostelium purpureum]
gi|325074172|gb|EGC28303.1| hypothetical protein DICPUDRAFT_24800 [Dictyostelium purpureum]
Length = 145
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 67/88 (76%), Gaps = 1/88 (1%)
Query: 41 NREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSE 99
++EE+D RS++VGNVDY T +++ +FQSCGTVNR+TI +DK G PKG YVEFL E
Sbjct: 1 DQEEIDGRSIYVGNVDYKSTHDQILAYFQSCGTVNRITILSDKTTGHPKGCCYVEFLNKE 60
Query: 100 AVQEALHLNESELHGRQLKVTVKRTNVP 127
++ A+ LN+S + RQ+K+T KRTN+P
Sbjct: 61 SINNAMALNDSIFNDRQIKITPKRTNLP 88
>gi|71026927|ref|XP_763107.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350060|gb|EAN30824.1| RNA binding protein, putative [Theileria parva]
Length = 151
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 77/127 (60%), Gaps = 10/127 (7%)
Query: 4 RLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEE 63
RL +++E L+Q+ +M + N E+VD RS++VGNVDYS P+E
Sbjct: 7 RLTVLDDE---LKQLQGMTDCQMVTDD------MDTDNHEDVDKRSIYVGNVDYSTKPQE 57
Query: 64 VQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVK 122
+Q+ F+S G +NR+TI DK+ G PKGYAYVEF +AV A+ LNES R +KV K
Sbjct: 58 LQEFFKSSGQINRITIMVDKYTGHPKGYAYVEFSNEDAVNNAIMLNESLFKERIIKVIPK 117
Query: 123 RTNVPGM 129
R N+PG
Sbjct: 118 RKNIPGF 124
>gi|324537487|gb|ADY49506.1| Polyadenylate-binding protein 2, partial [Ascaris suum]
Length = 127
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 79/113 (69%), Gaps = 3/113 (2%)
Query: 4 RLKEMEEEATALRQMHAKVGNE--MASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTP 61
R+KE+EEEA LR++ +V + M S + PA +SL ++ E D+RS+++GNV T
Sbjct: 15 RMKEIEEEAAMLRRLQVEVEKQLNMNSSRPPARIYASLEDKVEADNRSIYIGNVGCFATA 74
Query: 62 EEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELH 113
+E++ HF CG+VNRVTI TDKF G PKG+AY+EF + E+VQ A+ LNE+ H
Sbjct: 75 DELRAHFYGCGSVNRVTIPTDKFTGHPKGFAYMEFTEKESVQTAMALNETLFH 127
>gi|403223382|dbj|BAM41513.1| predicted protein [Theileria orientalis strain Shintoku]
Length = 150
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/93 (53%), Positives = 66/93 (70%), Gaps = 1/93 (1%)
Query: 43 EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAV 101
E+VD RS++VGNVDYS P+E+Q+ F+S G +NR+TI DK+ G PKGYAYVEF +AV
Sbjct: 37 EDVDRRSIYVGNVDYSTKPQELQEFFKSSGQINRITIMVDKWTGHPKGYAYVEFSSEDAV 96
Query: 102 QEALHLNESELHGRQLKVTVKRTNVPGMKQHRP 134
A+ LN+S R +KV KR N+PG + RP
Sbjct: 97 GNAVMLNDSLFKERIIKVIPKRKNIPGFNRRRP 129
>gi|432851905|ref|XP_004067100.1| PREDICTED: embryonic polyadenylate-binding protein 2-like [Oryzias
latipes]
Length = 259
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 79/130 (60%), Gaps = 2/130 (1%)
Query: 2 KIRLKEMEEEATALRQMHAKVGNEMASKQDPAAG-GSSLANREEVDSRSVFVGNVDYSCT 60
+++ EMEE+ L++ EM S P + R + D+RSV+VGNVDY T
Sbjct: 32 RVQELEMEEQTERLKEEERCDAEEMLSSPQPGPFYNMTPEERMDADNRSVYVGNVDYGAT 91
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
+E++ HF CG VNRVTI D+F G PKG+AY+EF A Q A+ L+E+ GR LKV
Sbjct: 92 ADELEIHFNGCGPVNRVTILCDRFSGHPKGFAYIEFSDRSAAQSAVGLHETMFRGRVLKV 151
Query: 120 TVKRTNVPGM 129
KRTN+PG+
Sbjct: 152 LPKRTNMPGI 161
>gi|68483054|ref|XP_714561.1| hypothetical protein CaO19.1389 [Candida albicans SC5314]
gi|46436140|gb|EAK95508.1| hypothetical protein CaO19.1389 [Candida albicans SC5314]
Length = 163
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 69/91 (75%), Gaps = 2/91 (2%)
Query: 39 LANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQ 97
LA +EE+D RSV+VGNVDY TPE++++ F G + RVTI D+F G PKGYAY+EF Q
Sbjct: 19 LAKQEEIDGRSVYVGNVDYQSTPEQLEEFFHGVGVIERVTILFDRFSGLPKGYAYIEFEQ 78
Query: 98 SEAVQEAL-HLNESELHGRQLKVTVKRTNVP 127
+E+VQ+A+ L+ E GR+L+VT KRTN+P
Sbjct: 79 TESVQKAIDELHGKEFRGRELRVTAKRTNLP 109
>gi|241952250|ref|XP_002418847.1| cytoplasmic RNA-binding protein, putative [Candida dubliniensis
CD36]
gi|223642186|emb|CAX44153.1| cytoplasmic RNA-binding protein, putative [Candida dubliniensis
CD36]
Length = 163
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 69/91 (75%), Gaps = 2/91 (2%)
Query: 39 LANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQ 97
LA +EE+D RSV+VGNVDY TPE++++ F G + RVTI D+F G PKGYAY+EF Q
Sbjct: 19 LAKQEEIDGRSVYVGNVDYQSTPEQLEEFFHGVGVIERVTILFDRFSGLPKGYAYIEFEQ 78
Query: 98 SEAVQEAL-HLNESELHGRQLKVTVKRTNVP 127
+E+VQ+A+ L+ E GR+L+VT KRTN+P
Sbjct: 79 TESVQKAIDELHGKEFRGRELRVTAKRTNLP 109
>gi|68482858|ref|XP_714655.1| hypothetical protein CaO19.8967 [Candida albicans SC5314]
gi|46436241|gb|EAK95607.1| hypothetical protein CaO19.8967 [Candida albicans SC5314]
gi|238883823|gb|EEQ47461.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 163
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 69/91 (75%), Gaps = 2/91 (2%)
Query: 39 LANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQ 97
LA +EE+D RSV+VGNVDY TPE++++ F G + RVTI D+F G PKGYAY+EF Q
Sbjct: 19 LAKQEEIDGRSVYVGNVDYQSTPEQLEEFFHGVGVIERVTILFDRFSGLPKGYAYIEFEQ 78
Query: 98 SEAVQEAL-HLNESELHGRQLKVTVKRTNVP 127
+E+VQ+A+ L+ E GR+L+VT KRTN+P
Sbjct: 79 TESVQKAIDELHGKEFRGRELRVTAKRTNLP 109
>gi|156097476|ref|XP_001614771.1| RNA-binding protein [Plasmodium vivax Sal-1]
gi|148803645|gb|EDL45044.1| RNA-binding protein, putative [Plasmodium vivax]
Length = 202
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 102/175 (58%), Gaps = 20/175 (11%)
Query: 5 LKEMEEEATALRQMHAKVGNEMASKQDPAAGG--SSLANREEVDSRSVFVGNVDYSCTPE 62
+ +++E + L+++ K+ NE A Q +G S +EE+++RS+FVGNVDYS PE
Sbjct: 28 INSIDKEFSDLQKL--KMMNEGAEMQMNQSGALDSHEMEQEEINNRSIFVGNVDYSTQPE 85
Query: 63 EVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 121
E+Q F CG +NRVTI +K G KGYAY+EF + +V+ AL L+ES RQ+KV
Sbjct: 86 ELQSLFSECGLINRVTILVNKNTGHSKGYAYIEFADASSVRTALSLSESFFKKRQIKVCS 145
Query: 122 KRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 176
KR N+PG +RP + +PF RG + L P G + P FR P+Y
Sbjct: 146 KRRNIPGF--NRP-KISPF-----RGRSMKATL-GPRGRLRQPSFR------PFY 185
>gi|115402163|ref|XP_001217158.1| polyadenylate-binding protein 2 [Aspergillus terreus NIH2624]
gi|114189004|gb|EAU30704.1| polyadenylate-binding protein 2 [Aspergillus terreus NIH2624]
Length = 185
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 79/130 (60%), Gaps = 11/130 (8%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EME EA LR+M A + + + ++ ++EE+D+RS+FVGNVDY +
Sbjct: 29 MKRRVAEMESEAAKLREMQATLDQQSENLRE---------DKEEIDARSIFVGNVDYGAS 79
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQSCG++NRVTI DKF GQPKG LQS + + Q +V
Sbjct: 80 PEEIQAHFQSCGSINRVTILLDKFTGQPKGMP-TSNLQSPVWWPNSGVKRKCVPWSQSEV 138
Query: 120 TVKRTNVPGM 129
KRTN+PGM
Sbjct: 139 VPKRTNLPGM 148
>gi|344292774|ref|XP_003418100.1| PREDICTED: embryonic polyadenylate-binding protein 2-like
[Loxodonta africana]
Length = 280
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 64/89 (71%), Gaps = 1/89 (1%)
Query: 42 REEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEA 100
+EEVD RS++VGNVDY T EE++ +F CG ++RVTI DKF G PKGYAY+EF + +
Sbjct: 143 KEEVDHRSIYVGNVDYGATAEELEAYFNPCGEIHRVTILCDKFSGHPKGYAYIEFAATTS 202
Query: 101 VQEALHLNESELHGRQLKVTVKRTNVPGM 129
VQ A+ L+ES R +KV KRTN PG+
Sbjct: 203 VQAAVKLDESVFRDRVIKVCPKRTNFPGI 231
>gi|348550266|ref|XP_003460953.1| PREDICTED: embryonic polyadenylate-binding protein 2-like [Cavia
porcellus]
Length = 273
Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query: 44 EVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 102
E D RS++VGNVDY T EE++ HF CG V+RVTI DKF G PKGYAYVEF + Q
Sbjct: 138 EADHRSIYVGNVDYGGTAEELEAHFHRCGEVHRVTILCDKFSGHPKGYAYVEFATQRSAQ 197
Query: 103 EALHLNESELHGRQLKVTVKRTNVPGM 129
A+ L+ES GR LKV KRTN PG+
Sbjct: 198 AAVELDESIFRGRALKVLPKRTNFPGI 224
>gi|327289636|ref|XP_003229530.1| PREDICTED: embryonic polyadenylate-binding protein 2-like, partial
[Anolis carolinensis]
Length = 262
Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 83/130 (63%), Gaps = 4/130 (3%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
+K +++EME+E L+++ AK + + S A + E D RS++VGNVDY T
Sbjct: 97 IKAKVREMEQEEW-LQELQAK--SLLLSSDSGLAFHRMTEEKVEADQRSIYVGNVDYGGT 153
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
E+++ HF +CG +NRVTI DKF G PKGYAY+EF +V+ A+ L+ES R +KV
Sbjct: 154 AEQLESHFNNCGKINRVTILCDKFSGHPKGYAYIEFADKSSVKVAMELDESVFRDRVIKV 213
Query: 120 TVKRTNVPGM 129
KRTN+PG+
Sbjct: 214 LPKRTNMPGI 223
>gi|50307397|ref|XP_453677.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642811|emb|CAH00773.1| KLLA0D13772p [Kluyveromyces lactis]
Length = 345
Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 71/116 (61%), Gaps = 1/116 (0%)
Query: 44 EVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 102
E+DSRS+FVGN+ T E +++HF+ CG V RVTI +K G PKGYAY+EF S+++
Sbjct: 99 ELDSRSIFVGNITTEATAETLEEHFKDCGEVVRVTILYNKLTGAPKGYAYIEFESSDSIP 158
Query: 103 EALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPY 158
+AL L +SELHG + V KRTNVPG ++ P VY + Y PY
Sbjct: 159 KALELKDSELHGETINVAKKRTNVPGYNNNKNYYPRKEWVYPGWQGNVMRQWYYPY 214
>gi|344242620|gb|EGV98723.1| Polyadenylate-binding protein 2 [Cricetulus griseus]
Length = 244
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
SL + E D+RS++VGNVDY T EE++ HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 73 SLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 132
Query: 97 QSEAVQEALHLNESELHGRQLKVTV 121
E+V+ +L L+ES GRQ+KV++
Sbjct: 133 DKESVRTSLALDESLFRGRQIKVSI 157
>gi|291575265|gb|ADE10198.1| ePABP2 [Cynoglossus semilaevis]
Length = 260
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 66/89 (74%), Gaps = 1/89 (1%)
Query: 42 REEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEA 100
R + D+RS++VGNVDY T +E++ HF +CG VNRVTI D+F G PKG+AY+EF ++
Sbjct: 74 RIDADNRSIYVGNVDYGATADELEIHFNACGPVNRVTILCDRFSGHPKGFAYIEFSDRDS 133
Query: 101 VQEALHLNESELHGRQLKVTVKRTNVPGM 129
VQ A+ L+E+ GR LKV KRTN+PG+
Sbjct: 134 VQSAIGLHETLFRGRVLKVLPKRTNMPGI 162
>gi|348516557|ref|XP_003445805.1| PREDICTED: polyadenylate-binding protein 2-like [Oreochromis
niloticus]
Length = 240
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 65/89 (73%), Gaps = 1/89 (1%)
Query: 42 REEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEA 100
R + D+RS++VGNVDY T +E++ HF CG VNRVTI D+F G PKG+AY+EF ++
Sbjct: 54 RIDADNRSIYVGNVDYGATADELEIHFNGCGPVNRVTILCDRFSGHPKGFAYIEFSDRDS 113
Query: 101 VQEALHLNESELHGRQLKVTVKRTNVPGM 129
VQ A+ L+E+ GR LKV KRTN+PG+
Sbjct: 114 VQSAIGLHETLFRGRVLKVMPKRTNMPGI 142
>gi|389583077|dbj|GAB65813.1| RNA-binding protein, partial [Plasmodium cynomolgi strain B]
Length = 213
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 73/114 (64%), Gaps = 4/114 (3%)
Query: 23 GNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD 82
G EM Q A + +EE+++RS+FVGNVDYS PEE+Q F CG +NRVTI +
Sbjct: 5 GAEMQMNQSGALDSHEM-EQEEINNRSIFVGNVDYSTQPEELQSLFSECGLINRVTILVN 63
Query: 83 K-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPR 135
K G KGYAY+EF + +V+ AL L+ES RQ+KV KR N+PG +RP+
Sbjct: 64 KNTGHSKGYAYIEFADASSVRTALSLSESFFKKRQIKVCSKRRNIPGF--NRPK 115
>gi|124507026|ref|XP_001352110.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|23505139|emb|CAD51921.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 202
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 85/134 (63%), Gaps = 7/134 (5%)
Query: 5 LKEMEEEATALRQMHAKVGNEMASKQDPAAGG--SSLANREEVDSRSVFVGNVDYSCTPE 62
+ +++E + L+++ K+ NE A Q G S +EE+++RS+FVGNVDYS PE
Sbjct: 28 INNIDKEFSDLQKL--KMMNEGAEIQMNQGGNVDSHEQEQEEINNRSIFVGNVDYSTQPE 85
Query: 63 EVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 121
E+Q F CG +NRVTI +K G KGYAY+EF + +V+ AL L+ES RQ+KV
Sbjct: 86 ELQSLFSECGLINRVTILVNKNTGHSKGYAYIEFADASSVRTALSLSESFFKKRQIKVCS 145
Query: 122 KRTNVPGMKQHRPR 135
KR N+PG +RP+
Sbjct: 146 KRRNIPGF--NRPK 157
>gi|448105136|ref|XP_004200421.1| Piso0_003007 [Millerozyma farinosa CBS 7064]
gi|448108271|ref|XP_004201052.1| Piso0_003007 [Millerozyma farinosa CBS 7064]
gi|359381843|emb|CCE80680.1| Piso0_003007 [Millerozyma farinosa CBS 7064]
gi|359382608|emb|CCE79915.1| Piso0_003007 [Millerozyma farinosa CBS 7064]
Length = 184
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 69/99 (69%), Gaps = 2/99 (2%)
Query: 34 AGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAY 92
+ S+L +EE D RS+++GNVDY TPE+++ F + G V RVTI DKF G PKGYAY
Sbjct: 37 SSDSTLQAQEEADKRSIYIGNVDYQSTPEQLENFFSTVGAVKRVTILFDKFSGFPKGYAY 96
Query: 93 VEFLQSEAVQEAL-HLNESELHGRQLKVTVKRTNVPGMK 130
VEF + E+ Q+A+ LN S GR+L+V KRTN+PG +
Sbjct: 97 VEFEEYESAQKAIEELNGSPFRGRELRVMTKRTNIPGQR 135
>gi|70943999|ref|XP_741979.1| RNA-binding protein [Plasmodium chabaudi chabaudi]
gi|56520699|emb|CAH74539.1| RNA-binding protein, putative [Plasmodium chabaudi chabaudi]
Length = 194
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 84/134 (62%), Gaps = 7/134 (5%)
Query: 5 LKEMEEEATALRQMHAKVGNEMASKQDPAAGG--SSLANREEVDSRSVFVGNVDYSCTPE 62
+ +++E + L+++ K+ N+ A Q G S +EE+++RS+FVGNVDYS PE
Sbjct: 25 INNIDKEFSDLQKL--KMMNDGAEMQMNQGGAPDSHEMEQEEINNRSIFVGNVDYSTQPE 82
Query: 63 EVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 121
E+Q F CG +NRVTI +K G KGYAY+EF +V+ AL L+ES RQ+KV
Sbjct: 83 ELQSLFSECGVINRVTILVNKNTGHSKGYAYIEFADPSSVRTALSLSESFFKKRQIKVCS 142
Query: 122 KRTNVPGMKQHRPR 135
KR N+PG +RPR
Sbjct: 143 KRRNIPGF--NRPR 154
>gi|320582005|gb|EFW96224.1| Cytoplasmic RNA-binding protein, contains an RNA recognition motif
(RRM) [Ogataea parapolymorpha DL-1]
Length = 156
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 70/105 (66%), Gaps = 1/105 (0%)
Query: 30 QDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPK 88
Q P + +N++E+DSRSV++GNVDYS P ++++ CG +NR+TI DK G+P+
Sbjct: 9 QQPRLAPNQPSNQQEIDSRSVYLGNVDYSALPGDLKELLDDCGVINRITILYDKHTGKPR 68
Query: 89 GYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHR 133
GYA+VEF E Q+A+ +N +E GR L VT KRTN PG+ R
Sbjct: 69 GYAFVEFETHEGAQKAVAMNGTEFRGRTLTVTPKRTNYPGITNAR 113
>gi|126304970|ref|XP_001376941.1| PREDICTED: embryonic polyadenylate-binding protein 2-like
[Monodelphis domestica]
Length = 322
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 70/116 (60%), Gaps = 5/116 (4%)
Query: 44 EVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 102
E D RSV+VGNVDYS T +E++ HF CG +NRVTI DK+ G PKGYAY+EF ++V+
Sbjct: 166 ESDQRSVYVGNVDYSGTAKELESHFSCCGEINRVTILCDKYSGHPKGYAYIEFAHEDSVK 225
Query: 103 EALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPY 158
A L+E+ GR +KV KRTN PG+ R P RG PP S Y
Sbjct: 226 TAAELDETTFRGRIIKVLPKRTNFPGIST--TNRGGPRNRLSGRGC--PPLRCSLY 277
>gi|164651984|gb|ABY64767.1| ePABP2 [Homo sapiens]
Length = 278
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 79/131 (60%), Gaps = 12/131 (9%)
Query: 2 KIRLKEMEEEATALRQMHA--KVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSC 59
+++ + EEE TA Q+ + VG ++ + + E D RSV+VGNVDY
Sbjct: 108 RVQQQAEEEEGTAAGQLLSPETVGCPLSGTPE---------EKVEADHRSVYVGNVDYGG 158
Query: 60 TPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLK 118
+ EE++ HF CG V+RVTI DKF G PKGYAY+EF +VQ A+ L++S GR +K
Sbjct: 159 SAEELEAHFSRCGEVHRVTILCDKFSGHPKGYAYIEFATKGSVQAAVELDQSLFRGRVIK 218
Query: 119 VTVKRTNVPGM 129
V KRTN PG+
Sbjct: 219 VLPKRTNFPGI 229
>gi|354548064|emb|CCE44800.1| hypothetical protein CPAR2_406030 [Candida parapsilosis]
Length = 173
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 68/90 (75%), Gaps = 1/90 (1%)
Query: 39 LANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQ 97
LA +EE DSRSV+VGNVDY TPE++++ F+ G ++RVTI DK+ G PKGYAYVEF
Sbjct: 26 LAKQEEADSRSVYVGNVDYKATPEQLEEFFRPVGVIDRVTILFDKYSGLPKGYAYVEFEN 85
Query: 98 SEAVQEALHLNESELHGRQLKVTVKRTNVP 127
E+V +A+ L+ E GR+++V+ KRTN+P
Sbjct: 86 IESVNKAVDLHGKEFRGREIRVSPKRTNIP 115
>gi|351698678|gb|EHB01597.1| Polyadenylate-binding protein 2 [Heterocephalus glaber]
Length = 118
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 74/117 (63%), Gaps = 4/117 (3%)
Query: 10 EEATALRQMHAKVGNEMASKQDPAAGG---SSLANREEVDSRSVFVGNVDYSCTPEEVQQ 66
EEA L+++ ++ +M P G S+ R E D+RS++VGNVDY T EE++
Sbjct: 2 EEAEKLKELQNEIEKQMNMSPPPGNAGPVIMSIEERMETDARSIYVGNVDYGATAEELEA 61
Query: 67 HFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVK 122
HF CG+VN VTI DKF G PKG+AY++F E+V+ +L L+ES GRQ+KV K
Sbjct: 62 HFHGCGSVNYVTILCDKFSGHPKGFAYMKFSDKESVRTSLALDESLFRGRQIKVIPK 118
>gi|68076033|ref|XP_679936.1| RNA-binding protein [Plasmodium berghei strain ANKA]
gi|56500788|emb|CAH95197.1| RNA-binding protein, putative [Plasmodium berghei]
Length = 172
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 84/134 (62%), Gaps = 7/134 (5%)
Query: 5 LKEMEEEATALRQMHAKVGNEMASKQDPAAGG--SSLANREEVDSRSVFVGNVDYSCTPE 62
+ +++E + L+++ K+ N+ A Q G S +EE+++RS+FVGNVDYS PE
Sbjct: 23 INNIDKEFSDLQKL--KMMNDGAEMQMNQTGAPDSHEMEQEEINNRSIFVGNVDYSTQPE 80
Query: 63 EVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 121
E+Q F CG +NRVTI +K G KGYAY+EF +V+ AL L+ES RQ+KV
Sbjct: 81 ELQSLFSECGIINRVTILVNKNTGHSKGYAYIEFADPSSVRTALSLSESFFKKRQIKVCS 140
Query: 122 KRTNVPGMKQHRPR 135
KR N+PG +RPR
Sbjct: 141 KRRNIPGF--NRPR 152
>gi|448522951|ref|XP_003868821.1| hypothetical protein CORT_0C05430 [Candida orthopsilosis Co 90-125]
gi|380353161|emb|CCG25917.1| hypothetical protein CORT_0C05430 [Candida orthopsilosis]
Length = 178
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 71/95 (74%), Gaps = 2/95 (2%)
Query: 39 LANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQ 97
LA +EEVDSRS++VGNVDY TPE++++ F G + RVTI DK+ G PKGYAYVEF +
Sbjct: 25 LAKQEEVDSRSIYVGNVDYQSTPEQLEEFFHVVGVIERVTILFDKYSGLPKGYAYVEFEK 84
Query: 98 SEAVQEALH-LNESELHGRQLKVTVKRTNVPGMKQ 131
E+V +A+ L+ E GR+++VT KRTN+PG ++
Sbjct: 85 IESVNKAVEDLHGKEFRGREVRVTPKRTNLPGFRK 119
>gi|151555091|gb|AAI48674.1| Similar to poly(A)binding protein nuclear-like 1 [synthetic
construct]
gi|162319022|gb|AAI56596.1| Similar to poly(A)binding protein nuclear-like 1 [synthetic
construct]
gi|261860988|dbj|BAI47016.1| Embryonic polyadenylate-binding protein 2 [synthetic construct]
Length = 289
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 75/124 (60%), Gaps = 12/124 (9%)
Query: 9 EEEATALRQMHA--KVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQ 66
EEE TA Q+ + VG ++ + + E D RSV+VGNVDY + EE++
Sbjct: 115 EEEGTAAGQLLSPETVGCPLSGTPE---------EKVEADHRSVYVGNVDYGGSAEELEA 165
Query: 67 HFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTN 125
HF CG V+RVTI DKF G PKGYAY+EF +VQ A+ L++S GR +KV KRTN
Sbjct: 166 HFSRCGEVHRVTILCDKFSGHPKGYAYIEFATKGSVQAAVELDQSLFRGRVIKVLPKRTN 225
Query: 126 VPGM 129
PG+
Sbjct: 226 FPGI 229
>gi|312283705|ref|NP_001073956.2| embryonic polyadenylate-binding protein 2 [Homo sapiens]
gi|205716472|sp|A6NDY0.1|EPAB2_HUMAN RecName: Full=Embryonic polyadenylate-binding protein 2;
Short=Embryonic poly(A)-binding protein 2;
Short=ePABP-2; Short=ePABP2; AltName: Full=Embryonic
poly(A)-binding protein type II; AltName:
Full=Poly(A)-binding protein nuclear-like 1
Length = 278
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 75/124 (60%), Gaps = 12/124 (9%)
Query: 9 EEEATALRQMHA--KVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQ 66
EEE TA Q+ + VG ++ + + E D RSV+VGNVDY + EE++
Sbjct: 115 EEEGTAAGQLLSPETVGCPLSGTPE---------EKVEADHRSVYVGNVDYGGSAEELEA 165
Query: 67 HFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTN 125
HF CG V+RVTI DKF G PKGYAY+EF +VQ A+ L++S GR +KV KRTN
Sbjct: 166 HFSRCGEVHRVTILCDKFSGHPKGYAYIEFATKGSVQAAVELDQSLFRGRVIKVLPKRTN 225
Query: 126 VPGM 129
PG+
Sbjct: 226 FPGI 229
>gi|417399667|gb|JAA46825.1| Putative apoptosis regulator [Desmodus rotundus]
Length = 361
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 62/84 (73%), Gaps = 1/84 (1%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
S+ + E D+RS++VGNVDY T EE++ HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 189 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 248
Query: 97 QSEAVQEALHLNESELHGRQLKVT 120
E+V+ +L L+ES GRQ+KV+
Sbjct: 249 DKESVRTSLALDESLFRGRQIKVS 272
>gi|395856895|ref|XP_003800852.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Otolemur
garnettii]
Length = 274
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query: 44 EVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 102
E D RS++VGNVDY T EE++ HF CG ++RVTI DKF G PKGYAY+EF + Q
Sbjct: 139 EADHRSIYVGNVDYGGTAEELEAHFNCCGEIHRVTILCDKFSGHPKGYAYIEFATKSSAQ 198
Query: 103 EALHLNESELHGRQLKVTVKRTNVPGM 129
A+ L++S GR +KV KRTN PG+
Sbjct: 199 AAVELDDSVFRGRVIKVLPKRTNFPGI 225
>gi|410912492|ref|XP_003969723.1| PREDICTED: polyadenylate-binding protein 2-like [Takifugu rubripes]
Length = 262
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 64/89 (71%), Gaps = 1/89 (1%)
Query: 42 REEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEA 100
R + D+RSV+VGNVDY T +E++ HF CG VNRVTI D+F G PKG+AY+EF ++
Sbjct: 76 RIDADNRSVYVGNVDYGATADELEIHFNGCGPVNRVTILCDRFSGHPKGFAYIEFSDRDS 135
Query: 101 VQEALHLNESELHGRQLKVTVKRTNVPGM 129
V A+ L+E+ GR LKV KRTN+PG+
Sbjct: 136 VNSAIGLHETLFRGRVLKVLPKRTNLPGI 164
>gi|341895844|gb|EGT51779.1| hypothetical protein CAEBREN_09841 [Caenorhabditis brenneri]
Length = 187
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 78/122 (63%), Gaps = 3/122 (2%)
Query: 7 EMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQ 66
E+EEE L+ M K+ E+ + A S ++E+D+RSVFVGNVD+ T EE++
Sbjct: 14 EIEEERLVLQDMQKKMAEELNKSE--RASPPSTEEQKEIDARSVFVGNVDFGSTIEELEA 71
Query: 67 HFQSCGTVNRVTIRTDKFGQ-PKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTN 125
HF+ CGT+ R TI DK+ Q K +AY+EF ++V+ AL ++E+ R++ VT KRTN
Sbjct: 72 HFKGCGTITRTTIPKDKYTQRQKNFAYIEFEDKDSVEMALVMHETMFRDRRIVVTAKRTN 131
Query: 126 VP 127
VP
Sbjct: 132 VP 133
>gi|402909310|ref|XP_003917365.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Papio anubis]
Length = 291
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Query: 44 EVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 102
E D RSV+VGNVDY + EE++ HF CG V+RVTI DKF G PKGYAY+EF +VQ
Sbjct: 156 EADHRSVYVGNVDYGGSAEELEAHFSGCGEVHRVTILCDKFSGHPKGYAYIEFATKGSVQ 215
Query: 103 EALHLNESELHGRQLKVTVKRTNVPGM 129
A+ L++S GR +KV KRTN PG+
Sbjct: 216 AAVELDQSLFRGRVIKVLPKRTNFPGI 242
>gi|297284777|ref|XP_001117810.2| PREDICTED: embryonic polyadenylate-binding protein 2-like, partial
[Macaca mulatta]
Length = 147
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Query: 44 EVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 102
E D RSV+VGNVDY + EE++ HF CG V+RVTI DKF G PKGYAY+EF +VQ
Sbjct: 12 EADHRSVYVGNVDYGGSAEELEAHFSGCGEVHRVTILCDKFSGHPKGYAYIEFATKGSVQ 71
Query: 103 EALHLNESELHGRQLKVTVKRTNVPGM 129
A+ L++S GR +KV KRTN PG+
Sbjct: 72 AAVELDQSLFRGRVIKVLPKRTNFPGI 98
>gi|417399469|gb|JAA46738.1| Putative apoptosis regulator [Desmodus rotundus]
Length = 351
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 62/84 (73%), Gaps = 1/84 (1%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
S+ + E D+RS++VGNVDY T EE++ HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 189 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 248
Query: 97 QSEAVQEALHLNESELHGRQLKVT 120
E+V+ +L L+ES GRQ+KV+
Sbjct: 249 DKESVRTSLALDESLFRGRQIKVS 272
>gi|308479093|ref|XP_003101756.1| hypothetical protein CRE_12048 [Caenorhabditis remanei]
gi|308262666|gb|EFP06619.1| hypothetical protein CRE_12048 [Caenorhabditis remanei]
Length = 172
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 76/125 (60%), Gaps = 6/125 (4%)
Query: 7 EMEEEATALRQMHAKVGNEM-ASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQ 65
EME EA L+Q+ K+ M K P + ++ +D++S+FVGNVDY T EE++
Sbjct: 4 EMEAEAKILKQIQTKLFESMNVGKMTP----PTEEEQKAIDAKSIFVGNVDYGATAEELE 59
Query: 66 QHFQSCGTVNRVTIRTDKFGQ-PKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRT 124
QHF CG + R TI DK + K +AYVEF + +V+ A+ +N S GRQ+ VT KRT
Sbjct: 60 QHFNGCGVIVRTTIPKDKMTKRQKNFAYVEFECAASVESAIVMNSSTFRGRQIVVTAKRT 119
Query: 125 NVPGM 129
N PGM
Sbjct: 120 NKPGM 124
>gi|410984123|ref|XP_003998381.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Felis catus]
Length = 277
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Query: 44 EVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 102
E D RSV+VGNVDY T EE++ +F SCG V+RVTI DKF G PKGYAY+EF + Q
Sbjct: 142 ESDHRSVYVGNVDYGGTAEELEAYFNSCGEVHRVTILCDKFSGHPKGYAYIEFAAESSAQ 201
Query: 103 EALHLNESELHGRQLKVTVKRTNVPGM 129
A+ L++S GR +KV KRTN+PG+
Sbjct: 202 AAVALDKSIFRGRVIKVLPKRTNLPGI 228
>gi|417409509|gb|JAA51255.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Desmodus rotundus]
Length = 303
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 62/84 (73%), Gaps = 1/84 (1%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
S+ + E D+RS++VGNVDY T EE++ HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 131 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 190
Query: 97 QSEAVQEALHLNESELHGRQLKVT 120
E+V+ +L L+ES GRQ+KV+
Sbjct: 191 DKESVRTSLALDESLFRGRQIKVS 214
>gi|417409417|gb|JAA51214.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Desmodus rotundus]
Length = 293
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 62/84 (73%), Gaps = 1/84 (1%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
S+ + E D+RS++VGNVDY T EE++ HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 131 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 190
Query: 97 QSEAVQEALHLNESELHGRQLKVT 120
E+V+ +L L+ES GRQ+KV+
Sbjct: 191 DKESVRTSLALDESLFRGRQIKVS 214
>gi|401842846|gb|EJT44882.1| SGN1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 250
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 71/106 (66%), Gaps = 1/106 (0%)
Query: 40 ANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQS 98
A++ E DSRS+FVGN+ TPE++++HFQ CG + R+T+ D+ G PKGY Y+EF
Sbjct: 56 AHQLEADSRSIFVGNITLDVTPEQIEEHFQDCGLIKRITLLYDRNTGAPKGYGYIEFESP 115
Query: 99 EAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQ 144
++AL LN EL+G+++ V+ KRTN+PG +H+ + F +Q
Sbjct: 116 AFREKALQLNGVELNGKKIAVSRKRTNIPGFNRHQNSQNQYFQQWQ 161
>gi|397468279|ref|XP_003805819.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Pan paniscus]
Length = 278
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Query: 44 EVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 102
E D RSV+VGNVDY + EE++ HF CG V+RVTI DKF G PKGYAY+EF +VQ
Sbjct: 143 EADHRSVYVGNVDYGGSAEELEAHFSRCGEVHRVTILCDKFSGHPKGYAYIEFATKGSVQ 202
Query: 103 EALHLNESELHGRQLKVTVKRTNVPGM 129
A+ L++S GR +KV KRTN PG+
Sbjct: 203 AAVELDQSLFRGRVIKVLPKRTNFPGI 229
>gi|365760126|gb|EHN01868.1| Sgn1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 250
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 71/106 (66%), Gaps = 1/106 (0%)
Query: 40 ANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQS 98
A++ E DSRS+FVGN+ TPE++++HFQ CG + R+T+ D+ G PKGY Y+EF
Sbjct: 56 AHQLEADSRSIFVGNITLDVTPEQIEEHFQDCGLIKRITLLYDRNTGAPKGYGYIEFESP 115
Query: 99 EAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQ 144
++AL LN EL+G+++ V+ KRTN+PG +H+ + F +Q
Sbjct: 116 AFREKALQLNGVELNGKKIAVSRKRTNIPGFNRHQNSQNQYFQQWQ 161
>gi|403260900|ref|XP_003922888.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Saimiri
boliviensis boliviensis]
Length = 274
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query: 44 EVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 102
E D RSV+VGNVDY + EE++ HF CG V RVTI DKF G PKGYAY+EF +VQ
Sbjct: 139 EADHRSVYVGNVDYGGSAEELEAHFSCCGKVYRVTILCDKFSGHPKGYAYIEFATKGSVQ 198
Query: 103 EALHLNESELHGRQLKVTVKRTNVPGM 129
A+ L++S GR +KV KRTN PG+
Sbjct: 199 AAVQLDQSLFRGRVIKVLPKRTNFPGI 225
>gi|354465338|ref|XP_003495137.1| PREDICTED: embryonic polyadenylate-binding protein 2-like isoform 2
[Cricetulus griseus]
Length = 281
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 84/160 (52%), Gaps = 19/160 (11%)
Query: 1 MKIRLKEME------EEATALRQMHAKVGNEMASKQDPAAGGSSLAN----REEVDSRSV 50
+K++L ME E+ R+ + G E+ P G + E D RSV
Sbjct: 93 IKLKLWAMEHAETLPEQPYVQRKATEEKGAEVGQLLSPEIMGCFFPGTPKEKVEADHRSV 152
Query: 51 FVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNE 109
+VGNVDY + E++ +F CG ++RVTI DKF G PKGYAY+EF +VQ A+ L+E
Sbjct: 153 YVGNVDYGGSAAELRAYFSPCGEIHRVTILCDKFSGHPKGYAYIEFASQNSVQAAVELDE 212
Query: 110 SELHGRQLKVTVKRTNVP--------GMKQHRPRRPNPFM 141
S GR +KV KRTN P G++ H R PF+
Sbjct: 213 STFRGRVIKVLPKRTNFPGISSTDRGGLRTHLGSRAQPFL 252
>gi|354465336|ref|XP_003495136.1| PREDICTED: embryonic polyadenylate-binding protein 2-like isoform 1
[Cricetulus griseus]
Length = 275
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 84/160 (52%), Gaps = 19/160 (11%)
Query: 1 MKIRLKEME------EEATALRQMHAKVGNEMASKQDPAAGGSSLAN----REEVDSRSV 50
+K++L ME E+ R+ + G E+ P G + E D RSV
Sbjct: 87 IKLKLWAMEHAETLPEQPYVQRKATEEKGAEVGQLLSPEIMGCFFPGTPKEKVEADHRSV 146
Query: 51 FVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNE 109
+VGNVDY + E++ +F CG ++RVTI DKF G PKGYAY+EF +VQ A+ L+E
Sbjct: 147 YVGNVDYGGSAAELRAYFSPCGEIHRVTILCDKFSGHPKGYAYIEFASQNSVQAAVELDE 206
Query: 110 SELHGRQLKVTVKRTNVP--------GMKQHRPRRPNPFM 141
S GR +KV KRTN P G++ H R PF+
Sbjct: 207 STFRGRVIKVLPKRTNFPGISSTDRGGLRTHLGSRAQPFL 246
>gi|396461545|ref|XP_003835384.1| hypothetical protein LEMA_P047250.1 [Leptosphaeria maculans JN3]
gi|312211935|emb|CBX92019.1| hypothetical protein LEMA_P047250.1 [Leptosphaeria maculans JN3]
Length = 186
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 75/130 (57%), Gaps = 31/130 (23%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
M+ R++EME+EA LR+M + NE ++ ++E+VD+RSVFVGNVDY +
Sbjct: 31 MRRRVQEMEDEAAKLREMQQSLDNERHEMRE---------SKEDVDARSVFVGNVDYGAS 81
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
PEE+Q HFQS G++NRVTI DKF G PKG + R LKV
Sbjct: 82 PEEIQAHFQSIGSINRVTILLDKFTGHPKG---------------------QFRDRNLKV 120
Query: 120 TVKRTNVPGM 129
KRTN+PGM
Sbjct: 121 VPKRTNLPGM 130
>gi|332846661|ref|XP_003315290.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Pan
troglodytes]
Length = 266
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Query: 44 EVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 102
E D RSV+VGNVDY + EE++ HF CG V+RVTI DKF G PKGYAY+EF +VQ
Sbjct: 143 EADHRSVYVGNVDYGGSAEELEAHFSRCGEVHRVTILCDKFSGHPKGYAYIEFATKGSVQ 202
Query: 103 EALHLNESELHGRQLKVTVKRTNVPGM 129
A+ L++S GR +KV KRTN PG+
Sbjct: 203 AAVELDQSLFRGRVIKVLPKRTNFPGI 229
>gi|426383231|ref|XP_004058190.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Gorilla
gorilla gorilla]
Length = 275
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Query: 44 EVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 102
E D RSV+VGNVDY + EE++ HF CG V+RVTI DKF G PKGYAY+EF +VQ
Sbjct: 140 EADHRSVYVGNVDYGGSAEELEAHFSRCGEVHRVTILCDKFSGHPKGYAYIEFATKGSVQ 199
Query: 103 EALHLNESELHGRQLKVTVKRTNVPGM 129
A+ L++S GR +KV KRTN PG+
Sbjct: 200 AAVELDQSLFRGRVIKVLPKRTNFPGI 226
>gi|426243462|ref|XP_004015574.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Ovis aries]
Length = 272
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 77/128 (60%), Gaps = 16/128 (12%)
Query: 5 LKEMEEEATAL--RQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPE 62
L E EE A AL RQ+ ++ K D S + E D RSV+VGNVDY T +
Sbjct: 109 LDEGEEAAGALLARQL-------LSPKTD------SPLEKAEADHRSVYVGNVDYGGTAQ 155
Query: 63 EVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 121
E++ +F CG ++RVTI DKF G PKGYAY+EF + Q A+ L++S GR +KV
Sbjct: 156 ELEAYFNHCGEIHRVTILCDKFSGHPKGYAYIEFATESSAQAAVELDKSIFRGRVIKVLP 215
Query: 122 KRTNVPGM 129
KRTN+PG+
Sbjct: 216 KRTNLPGI 223
>gi|338723296|ref|XP_001488137.2| PREDICTED: embryonic polyadenylate-binding protein 2-like [Equus
caballus]
Length = 271
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query: 44 EVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 102
+ D RS++VGNVDY T EE++ +F CG + RVTI DKF G PKGYAY+EF A Q
Sbjct: 136 QADHRSIYVGNVDYGGTAEELEAYFNQCGEIRRVTILCDKFSGHPKGYAYIEFATESAAQ 195
Query: 103 EALHLNESELHGRQLKVTVKRTNVPGM 129
A+ L+ES GR +KV KRTN+PG+
Sbjct: 196 TAVELDESIFRGRVIKVLPKRTNLPGI 222
>gi|341895850|gb|EGT51785.1| hypothetical protein CAEBREN_00783 [Caenorhabditis brenneri]
Length = 186
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 80/122 (65%), Gaps = 3/122 (2%)
Query: 7 EMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQ 66
E+++E L++M K+ ++ + A SL ++E+D+RS+FVGNVD+ T +E++
Sbjct: 14 EIDQERLVLQEMQEKMAEQL--NRSGKAPPPSLDEQKEIDARSIFVGNVDFGSTVDELEA 71
Query: 67 HFQSCGTVNRVTIRTDKFGQ-PKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTN 125
HF+ CG + R TI DK+ Q K +AY+EF + E+V+ AL ++E+ RQ+ VT KRTN
Sbjct: 72 HFKGCGLITRTTIPKDKYSQRQKNFAYIEFEEKESVEMALIMHETTFRDRQIVVTAKRTN 131
Query: 126 VP 127
VP
Sbjct: 132 VP 133
>gi|50414059|ref|XP_457358.1| DEHA2B09372p [Debaryomyces hansenii CBS767]
gi|49653023|emb|CAG85362.1| DEHA2B09372p [Debaryomyces hansenii CBS767]
Length = 190
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 68/91 (74%), Gaps = 2/91 (2%)
Query: 39 LANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQ 97
LA +EE+DSRSV+VGNVDY TPE+++ F++ G + R+TI DK+ G PKGYAYVEF
Sbjct: 45 LAKQEEIDSRSVYVGNVDYQSTPEQLESFFKAVGVIERITILFDKYSGLPKGYAYVEFEI 104
Query: 98 SEAVQEAL-HLNESELHGRQLKVTVKRTNVP 127
E+V++A+ L+ E GR L+VT KRTN+P
Sbjct: 105 PESVEKAIEELHGKEFRGRDLRVTPKRTNLP 135
>gi|406607797|emb|CCH40902.1| Embryonic polyadenylate-binding protein 2 [Wickerhamomyces
ciferrii]
Length = 228
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 82/151 (54%), Gaps = 35/151 (23%)
Query: 10 EEATALRQMHAKVGNEMASKQDPA------------------------AGGSSLANR--- 42
E+ L++ HA +G E+A QD A G S +NR
Sbjct: 4 EQPEILKEQHATIGQELA--QDYAEYIGDDGTPIPQQSQDQQDQQQEHKGFQSRSNRSPE 61
Query: 43 -----EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
+E DSRSV++GNVDY+ TPEE+++ F GT+NRVTI D+F G+PKGYAYVEF
Sbjct: 62 EIEAQKETDSRSVYIGNVDYNTTPEELEEFFSKIGTINRVTILFDRFTGRPKGYAYVEFE 121
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVP 127
+V A+ L+ E R + V +KRTNVP
Sbjct: 122 SQSSVDSAIGLSGQEFKDRIISVNIKRTNVP 152
>gi|166157542|ref|NP_001107251.1| embryonic polyadenylate-binding protein 2 [Rattus norvegicus]
gi|205716473|sp|B0BNE4.1|EPAB2_RAT RecName: Full=Embryonic polyadenylate-binding protein 2;
Short=Embryonic poly(A)-binding protein 2;
Short=ePABP-2; Short=ePABP2; AltName: Full=Embryonic
poly(A)-binding protein type II; AltName:
Full=Poly(A)-binding protein nuclear-like 1
gi|165970991|gb|AAI58790.1| Pabpnl1 protein [Rattus norvegicus]
Length = 269
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query: 44 EVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 102
E D RSV+VGNVDY + E++ +F CG ++RVTI DKF G PKGYAY+EF +VQ
Sbjct: 135 EADHRSVYVGNVDYGGSAAELEAYFSPCGEIHRVTILCDKFSGHPKGYAYIEFASKSSVQ 194
Query: 103 EALHLNESELHGRQLKVTVKRTNVPGM 129
A+ L+ES GR +KV KRTN PG+
Sbjct: 195 AAVRLDESTFRGRVIKVLPKRTNFPGI 221
>gi|149038404|gb|EDL92764.1| similar to embryonic pol(yA) binding protein 2 (predicted) [Rattus
norvegicus]
Length = 284
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query: 44 EVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 102
E D RSV+VGNVDY + E++ +F CG ++RVTI DKF G PKGYAY+EF +VQ
Sbjct: 150 EADHRSVYVGNVDYGGSAAELEAYFSPCGEIHRVTILCDKFSGHPKGYAYIEFASKSSVQ 209
Query: 103 EALHLNESELHGRQLKVTVKRTNVPGM 129
A+ L+ES GR +KV KRTN PG+
Sbjct: 210 AAVRLDESTFRGRVIKVLPKRTNFPGI 236
>gi|67592644|ref|XP_665658.1| poly(A) binding protein II [Cryptosporidium hominis TU502]
gi|54656446|gb|EAL35428.1| poly(A) binding protein II [Cryptosporidium hominis]
Length = 263
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 76/125 (60%), Gaps = 7/125 (5%)
Query: 5 LKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEV 64
L ++ + + + + VG M P + A+ EE+ RS+++GNVDY E+
Sbjct: 74 LFDLSDNKSLNDESNKNVGESMMDTDLPGS-----ADDEEM-KRSIYIGNVDYGTKLTEL 127
Query: 65 QQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKR 123
Q F+SCG++NR+TI DK G PKG+AY+EF + EAV+ AL + + GRQ+KV+ KR
Sbjct: 128 QDLFKSCGSINRITIMNDKRTGMPKGFAYLEFCEPEAVETALKFDGAMFRGRQIKVSTKR 187
Query: 124 TNVPG 128
N+PG
Sbjct: 188 KNIPG 192
>gi|292616346|ref|XP_002662984.1| PREDICTED: polyadenylate-binding protein 2-B-like [Danio rerio]
gi|292616348|ref|XP_002662985.1| PREDICTED: polyadenylate-binding protein 2-B-like [Danio rerio]
Length = 163
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 65/89 (73%), Gaps = 1/89 (1%)
Query: 42 REEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEA 100
R + D RS++VGNVDY T +E++ +F SCG VNRVTI ++F G PKG+AY+EF E+
Sbjct: 31 RIDSDRRSIYVGNVDYGATADELEMYFNSCGHVNRVTIPYNRFTGHPKGFAYIEFSDRES 90
Query: 101 VQEALHLNESELHGRQLKVTVKRTNVPGM 129
V+ A+ L+E+ GR +KV+ KRTN+PG
Sbjct: 91 VRTAMALDETLFRGRVIKVSPKRTNIPGF 119
>gi|66475216|ref|XP_627424.1| Sgn1p-like RRM domain containing protein [Cryptosporidium parvum
Iowa II]
gi|46228897|gb|EAK89746.1| Sgn1p-like RRM domain containing protein [Cryptosporidium parvum
Iowa II]
Length = 262
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 76/126 (60%), Gaps = 7/126 (5%)
Query: 4 RLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEE 63
L ++ + + + + VG M P + A+ EE+ RS+++GNVDY E
Sbjct: 72 NLFDLSDNKSLNDESNKNVGESMMDTDLPGS-----ADDEEM-KRSIYIGNVDYGTKLTE 125
Query: 64 VQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVK 122
+Q F+SCG++NR+TI DK G PKG+AY+EF + EAV+ AL + + GRQ+KV+ K
Sbjct: 126 LQDLFKSCGSINRITIMNDKRTGMPKGFAYLEFCEPEAVETALKFDGAMFRGRQIKVSTK 185
Query: 123 RTNVPG 128
R N+PG
Sbjct: 186 RKNIPG 191
>gi|189521749|ref|XP_001923043.1| PREDICTED: polyadenylate-binding protein 2-B-like isoform 1 [Danio
rerio]
Length = 192
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 65/89 (73%), Gaps = 1/89 (1%)
Query: 42 REEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEA 100
R + D RS++VGNVDY T +E++ +F SCG VNRVTI ++F G PKG+AY+EF E+
Sbjct: 60 RIDSDRRSIYVGNVDYGATADELEMYFNSCGHVNRVTIPYNRFTGHPKGFAYIEFSDRES 119
Query: 101 VQEALHLNESELHGRQLKVTVKRTNVPGM 129
V+ A+ L+E+ GR +KV+ KRTN+PG
Sbjct: 120 VRTAMALDETLFRGRVIKVSPKRTNIPGF 148
>gi|395748220|ref|XP_003778730.1| PREDICTED: LOW QUALITY PROTEIN: embryonic polyadenylate-binding
protein 2 [Pongo abelii]
Length = 278
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 78/145 (53%), Gaps = 24/145 (16%)
Query: 9 EEEATALRQMHAKVGNEMASKQDPAAGGSSLAN----REEVDSRSVFVGNVDYSCTPEEV 64
EEE T RQ+ + P G L + E RSV+VGNVDY + EE+
Sbjct: 115 EEEGTVARQLLS-----------PETMGCPLPGTPEEKVEAXHRSVYVGNVDYGGSAEEL 163
Query: 65 QQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKR 123
+ HF CG V+RVTI DKF G PKGYAY+EF +VQ A+ L++S GR +KV KR
Sbjct: 164 EAHFSRCGEVHRVTILCDKFSGHPKGYAYIEFATKRSVQAAVELDQSLFRGRVIKVLPKR 223
Query: 124 TNVP--------GMKQHRPRRPNPF 140
TN P G++ H+ R PF
Sbjct: 224 TNFPGISSTDRGGLRGHQGSRGAPF 248
>gi|67969697|dbj|BAE01197.1| unnamed protein product [Macaca fascicularis]
Length = 147
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 83/150 (55%), Gaps = 16/150 (10%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
S+ + E D+RS++VGNVDY T EE++ HF CG+VNRVTI D+F G PKG+AY+EF
Sbjct: 2 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDEFSGHPKGFAYIEF- 60
Query: 97 QSEAVQE--ALHLNESELHGRQLKVTVKRTNVPGMK---------QHRPRRPNPFMVYQS 145
+ V+ +L L+ES G+++KV KRTN PG+ ++R R N S
Sbjct: 61 SDKGVRRGPSLALDESLFRGKEIKVIPKRTNRPGISTTDRGFPRARYRARTTN---YNSS 117
Query: 146 RGAIIPPFLYSPYGYGKIPRFRMPMRYSPY 175
R F P G R R YSPY
Sbjct: 118 RSRFYSGFNSRPRGRVYRGRARATSWYSPY 147
>gi|296478138|tpg|DAA20253.1| TPA: ePABP2-like [Bos taurus]
Length = 272
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 77/128 (60%), Gaps = 16/128 (12%)
Query: 5 LKEMEEEATAL--RQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPE 62
L E EE A AL RQ+ ++ + D S + E D RS++VGNVDY T +
Sbjct: 109 LDEGEEAAGALLARQL-------LSPETD------SPLEKAEADHRSIYVGNVDYGGTAQ 155
Query: 63 EVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 121
E++ +F CG ++RVTI DKF G PKGYAY+EF + Q A+ L++S GR +KV
Sbjct: 156 ELEAYFNHCGEIHRVTILCDKFSGHPKGYAYIEFATESSAQAAVELDKSIFRGRVIKVLP 215
Query: 122 KRTNVPGM 129
KRTN+PG+
Sbjct: 216 KRTNLPGI 223
>gi|156082802|ref|XP_001608885.1| RNA binding protein [Babesia bovis T2Bo]
gi|154796135|gb|EDO05317.1| RNA binding protein, putative [Babesia bovis]
Length = 163
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 64/92 (69%), Gaps = 1/92 (1%)
Query: 43 EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAV 101
+EVD RS++VGNVDYS P ++Q+ F++ G +NR+TI DK+ G+PKGYAY+EF +AV
Sbjct: 37 DEVDRRSIYVGNVDYSTKPHDLQEFFKASGQINRITIMVDKWTGKPKGYAYIEFASEDAV 96
Query: 102 QEALHLNESELHGRQLKVTVKRTNVPGMKQHR 133
A+ LN+ R +KV KR N+PG + R
Sbjct: 97 NNAVMLNDCLFKERIIKVIPKRKNIPGYNRKR 128
>gi|448537326|ref|XP_003871310.1| cytoplasmic RNA-binding protein [Candida orthopsilosis Co 90-125]
gi|380355667|emb|CCG25185.1| cytoplasmic RNA-binding protein [Candida orthopsilosis]
Length = 216
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 2/93 (2%)
Query: 40 ANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQS 98
A R E D+RSV++GNVDY TP E+QQHF GTVNRVTI T+K GQPKG+AY+EF
Sbjct: 85 AERRESDARSVYIGNVDYPTTPLELQQHFSPAGTVNRVTIMTNKVTGQPKGFAYLEFSDV 144
Query: 99 EAVQEAL-HLNESELHGRQLKVTVKRTNVPGMK 130
+++ +A+ L+ S R LKV KRTN+PG+
Sbjct: 145 DSMNKAVATLDGSIFRDRPLKVLPKRTNIPGVN 177
>gi|341890455|gb|EGT46390.1| hypothetical protein CAEBREN_09794 [Caenorhabditis brenneri]
Length = 188
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 78/122 (63%), Gaps = 3/122 (2%)
Query: 7 EMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQ 66
E+++E L++M K+ E+ + A SL ++E+D+RS+FVGNVD+ T +E++
Sbjct: 16 EIDQERLVLQEMQEKMAEEL--NRSGKATPPSLEEQKEIDARSIFVGNVDFGSTVDELEA 73
Query: 67 HFQSCGTVNRVTIRTDKFGQ-PKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTN 125
HF+ CG + R TI +KF Q K +AY+EF +V+ AL ++ES R++ VT KRTN
Sbjct: 74 HFKGCGVITRATIPKNKFSQRQKNFAYIEFEDKNSVEMALLMHESIFRDRKIVVTAKRTN 133
Query: 126 VP 127
VP
Sbjct: 134 VP 135
>gi|126136038|ref|XP_001384543.1| hypothetical protein PICST_45495 [Scheffersomyces stipitis CBS
6054]
gi|126091741|gb|ABN66514.1| predicted protein, partial [Scheffersomyces stipitis CBS 6054]
Length = 155
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 68/91 (74%), Gaps = 2/91 (2%)
Query: 39 LANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQ 97
LA +EE+D RS++VGNVDY TPE++++ F G + RVTI D++ G PKGYAYVEF +
Sbjct: 25 LAKQEEIDGRSIYVGNVDYQSTPEQLEEFFHVVGVIERVTILFDRYSGLPKGYAYVEFEK 84
Query: 98 SEAVQEALH-LNESELHGRQLKVTVKRTNVP 127
+E+V+ A+ L+ E GR+++V+ KRTN+P
Sbjct: 85 TESVERAIEDLHGKEFRGREIRVSAKRTNLP 115
>gi|440908773|gb|ELR58758.1| Embryonic polyadenylate-binding protein 2, partial [Bos grunniens
mutus]
Length = 272
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 77/128 (60%), Gaps = 16/128 (12%)
Query: 5 LKEMEEEATAL--RQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPE 62
L E EE A AL RQ+ ++ + D S + E D RS++VGNVDY T +
Sbjct: 109 LDEGEEAAGALLARQL-------LSPETD------SPLEKAEADHRSIYVGNVDYGGTAQ 155
Query: 63 EVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 121
E++ +F CG ++RVTI DKF G PKGYAY+EF + Q A+ L++S GR +KV
Sbjct: 156 ELEAYFNHCGEIHRVTILCDKFSGHPKGYAYIEFATESSAQAAVELDKSIFRGRVIKVLP 215
Query: 122 KRTNVPGM 129
KRTN+PG+
Sbjct: 216 KRTNLPGI 223
>gi|354544353|emb|CCE41076.1| hypothetical protein CPAR2_300650 [Candida parapsilosis]
Length = 217
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 64/91 (70%), Gaps = 2/91 (2%)
Query: 42 REEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEA 100
R + D+RS+++GNVDY TP E+Q+HF G VNRVTI T+K GQPKG+AY+EF E
Sbjct: 88 RRDSDARSIYIGNVDYQATPLELQEHFSPAGIVNRVTIMTNKITGQPKGFAYMEFSDVEG 147
Query: 101 VQEAL-HLNESELHGRQLKVTVKRTNVPGMK 130
V A+ L++S R+LKV KRTN+PG+
Sbjct: 148 VNAAVKELDDSVFRDRRLKVLPKRTNIPGIN 178
>gi|148679749|gb|EDL11696.1| poly(A)binding protein nuclear-like 1 [Mus musculus]
Length = 288
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query: 44 EVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 102
E D RSVFVGNVDY + E++ +F CG ++RVTI DKF G PKGYAY+EF +V+
Sbjct: 154 EADHRSVFVGNVDYGGSAAELEAYFSPCGEIHRVTILCDKFSGHPKGYAYIEFASHRSVK 213
Query: 103 EALHLNESELHGRQLKVTVKRTNVPGM 129
A+ L+ES GR +KV KRTN PG+
Sbjct: 214 AAVGLDESTFRGRVIKVLPKRTNFPGI 240
>gi|219519920|gb|AAI45635.1| Pabpnl1 protein [Mus musculus]
Length = 288
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query: 44 EVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 102
E D RSVFVGNVDY + E++ +F CG ++RVTI DKF G PKGYAY+EF +V+
Sbjct: 154 EADHRSVFVGNVDYGGSAAELEAYFSPCGEIHRVTILCDKFSGHPKGYAYIEFASHRSVK 213
Query: 103 EALHLNESELHGRQLKVTVKRTNVPGM 129
A+ L+ES GR +KV KRTN PG+
Sbjct: 214 AAVGLDESTFRGRVIKVLPKRTNFPGI 240
>gi|55925591|ref|NP_001007463.1| embryonic polyadenylate-binding protein 2 [Mus musculus]
gi|81910338|sp|Q5XFR0.1|EPAB2_MOUSE RecName: Full=Embryonic polyadenylate-binding protein 2;
Short=Embryonic poly(A)-binding protein 2;
Short=ePABP-2; Short=ePABP2; AltName: Full=Embryonic
poly(A)-binding protein type II; AltName:
Full=Poly(A)-binding protein nuclear-like 1
gi|54111431|tpg|DAA02003.1| TPA_exp: embryonic poly(A) binding protein 2 [Mus musculus]
gi|223461244|gb|AAI41318.1| Poly(A)binding protein nuclear-like 1 [Mus musculus]
gi|223461425|gb|AAI41317.1| Poly(A)binding protein nuclear-like 1 [Mus musculus]
Length = 273
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query: 44 EVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 102
E D RSVFVGNVDY + E++ +F CG ++RVTI DKF G PKGYAY+EF +V+
Sbjct: 139 EADHRSVFVGNVDYGGSAAELEAYFSPCGEIHRVTILCDKFSGHPKGYAYIEFASHRSVK 198
Query: 103 EALHLNESELHGRQLKVTVKRTNVPGM 129
A+ L+ES GR +KV KRTN PG+
Sbjct: 199 AAVGLDESTFRGRVIKVLPKRTNFPGI 225
>gi|168038419|ref|XP_001771698.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677005|gb|EDQ63481.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 746
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 97/175 (55%), Gaps = 23/175 (13%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLA-----NREEVDSRSVFVGNV 55
MK RL++++ + T LR A+V E+ + PAAG S+ ++E+++ RSVFV NV
Sbjct: 508 MKKRLRQVQLDMTKLRARQAEVSKEV--QNSPAAGVRSIPFEPQPSQEDINDRSVFVTNV 565
Query: 56 DYSCTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESELHG 114
++ T ++ HF CG VNRVT+ + G+PKG A+VEF +AV+ AL LNES L
Sbjct: 566 HFAATQAALRVHFGGCGYVNRVTLLVEPATGKPKGSAFVEFTTKDAVENALALNESSLLS 625
Query: 115 RQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMP 169
R LKV K + + M P+P + + IPP P+ G PR MP
Sbjct: 626 RNLKVMRKDSAIAEMN------PDPSL----SSSFIPP----PFSRGH-PREHMP 665
>gi|308459121|ref|XP_003091886.1| hypothetical protein CRE_30229 [Caenorhabditis remanei]
gi|308254866|gb|EFO98818.1| hypothetical protein CRE_30229 [Caenorhabditis remanei]
Length = 183
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 76/125 (60%), Gaps = 6/125 (4%)
Query: 6 KEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQ 65
+E+E EA L+Q+ K+ +M P ++ +D++SVF+GNV+Y T EE++
Sbjct: 16 EELEAEAVVLKQIQNKLSEKMGMMTPPTE-----EEQKAIDAKSVFIGNVEYGATIEELE 70
Query: 66 QHFQSCGTVNRVTIRTDKFGQP-KGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRT 124
QHF+ CGT+ R TI DK + K +AY+EF S +V A+ +N S R++ VT KRT
Sbjct: 71 QHFKGCGTIVRTTIPKDKVTKKQKNFAYIEFESSASVDNAIVMNGSIFRDRKIVVTSKRT 130
Query: 125 NVPGM 129
N PGM
Sbjct: 131 NKPGM 135
>gi|367017760|ref|XP_003683378.1| hypothetical protein TDEL_0H03080 [Torulaspora delbrueckii]
gi|359751042|emb|CCE94167.1| hypothetical protein TDEL_0H03080 [Torulaspora delbrueckii]
Length = 275
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 76/123 (61%), Gaps = 9/123 (7%)
Query: 25 EMASKQDPAAGGSSLANREE-------VDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRV 77
+++ + P A G +REE DSRS+FVGN+ TPE + +HF+ CG + R+
Sbjct: 47 DLSIDEKPNANGLPKLSREERYAAQVEADSRSIFVGNITPEITPEIIDEHFKDCGVIERI 106
Query: 78 TIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRP-R 135
T+ DK G PKGYAYVEF ++A ++AL N SEL G ++ V KRTN+PG +H +
Sbjct: 107 TLLYDKNTGAPKGYAYVEFENADAQEKALEHNGSELKGGKISVYKKRTNLPGYHRHAQFQ 166
Query: 136 RPN 138
RPN
Sbjct: 167 RPN 169
>gi|209877356|ref|XP_002140120.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209555726|gb|EEA05771.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 206
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH 106
RS+++GNVDY P E+Q+ F+SCG++NR+TI DK G PKG+AY+EF + EAV AL
Sbjct: 66 RSIYIGNVDYGTKPTELQELFKSCGSINRITIMNDKRTGMPKGFAYLEFCEPEAVDTALK 125
Query: 107 LNESELHGRQLKVTVKRTNVPGM 129
+ + GRQ+KV KR N+PG
Sbjct: 126 FDGAMFRGRQIKVCSKRKNIPGF 148
>gi|308459095|ref|XP_003091873.1| hypothetical protein CRE_30215 [Caenorhabditis remanei]
gi|308254853|gb|EFO98805.1| hypothetical protein CRE_30215 [Caenorhabditis remanei]
Length = 182
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 75/123 (60%), Gaps = 1/123 (0%)
Query: 8 MEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQH 67
MEEE A ++ ++ N ++ K + + ++ +D++S+FVGNVDY T EE++ H
Sbjct: 13 MEEELQAEARVLKEIQNRLSEKMEIGKLTPTEEEQKAIDAKSIFVGNVDYGATVEELEAH 72
Query: 68 FQSCGTVNRVTIRTDKFGQP-KGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNV 126
F CGT+ R TI DKF + K +AY+EF +V+ A +N S GRQ+ VT KRTN
Sbjct: 73 FMGCGTIVRTTIPKDKFTKKQKNFAYIEFESVASVENATVMNASIFRGRQIVVTAKRTNK 132
Query: 127 PGM 129
PG+
Sbjct: 133 PGL 135
>gi|335289034|ref|XP_003126854.2| PREDICTED: embryonic polyadenylate-binding protein 2-like [Sus
scrofa]
Length = 285
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 68/113 (60%), Gaps = 2/113 (1%)
Query: 18 MHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRV 77
+ + G ++ P+ GG + E D RSV+VGNVDY T E++ +F CG ++RV
Sbjct: 123 LSPEAGRSQRARPGPSLGGWP-QQKVEADHRSVYVGNVDYEGTARELEAYFNHCGEIHRV 181
Query: 78 TIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 129
TI DKF G PKGYAY+EF + Q A+ L+ S GR +KV KRTN PG+
Sbjct: 182 TILCDKFSGHPKGYAYIEFATESSAQAAVELDNSVFRGRVIKVLPKRTNFPGI 234
>gi|296474988|tpg|DAA17103.1| TPA: ePABP2-like [Bos taurus]
Length = 271
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 42 REEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEA 100
+ E D RS++VGNVDY T +E++ +F CG +++VTI DKF G PKGYAY+EF +
Sbjct: 134 KAEADHRSIYVGNVDYGGTAQELEAYFNHCGEIHQVTILCDKFSGHPKGYAYIEFATESS 193
Query: 101 VQEALHLNESELHGRQLKVTVKRTNVPGM 129
Q A+ L++S GR +KV KRTN+PG+
Sbjct: 194 AQAAVELDKSIFRGRVIKVLPKRTNLPGI 222
>gi|323333070|gb|EGA74471.1| Sgn1p [Saccharomyces cerevisiae AWRI796]
Length = 250
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 68/106 (64%), Gaps = 1/106 (0%)
Query: 40 ANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQS 98
A++ E DSRS+FVGN+ TPE+++ HF+ CG + R+T+ D+ G PKGY Y+EF
Sbjct: 56 AHQLEADSRSIFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESP 115
Query: 99 EAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQ 144
++AL LN EL G+++ V+ KRTN+PG +H + F +Q
Sbjct: 116 AYREKALQLNGGELKGKKIAVSRKRTNIPGFNRHYNSQNQYFQQWQ 161
>gi|256274155|gb|EEU09065.1| Sgn1p [Saccharomyces cerevisiae JAY291]
gi|259147260|emb|CAY80513.1| Sgn1p [Saccharomyces cerevisiae EC1118]
gi|323348162|gb|EGA82416.1| Sgn1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 250
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 68/106 (64%), Gaps = 1/106 (0%)
Query: 40 ANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQS 98
A++ E DSRS+FVGN+ TPE+++ HF+ CG + R+T+ D+ G PKGY Y+EF
Sbjct: 56 AHQLEADSRSIFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESP 115
Query: 99 EAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQ 144
++AL LN EL G+++ V+ KRTN+PG +H + F +Q
Sbjct: 116 AYREKALQLNGGELKGKKIAVSRKRTNIPGFNRHYNSQNQYFQQWQ 161
>gi|6322191|ref|NP_012266.1| Sgn1p [Saccharomyces cerevisiae S288c]
gi|731904|sp|P40561.1|SGN1_YEAST RecName: Full=RNA-binding protein SGN1
gi|557850|emb|CAA86203.1| unnamed protein product [Saccharomyces cerevisiae]
gi|151943159|gb|EDN61494.1| cytoplasmic RNA-binding protein [Saccharomyces cerevisiae YJM789]
gi|190406222|gb|EDV09489.1| RNA-binding protein SGN1 [Saccharomyces cerevisiae RM11-1a]
gi|285812648|tpg|DAA08547.1| TPA: Sgn1p [Saccharomyces cerevisiae S288c]
gi|346228212|gb|AEO21089.1| SGN1 [synthetic construct]
gi|349578952|dbj|GAA24116.1| K7_Sgn1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392298723|gb|EIW09819.1| Sgn1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 250
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 68/106 (64%), Gaps = 1/106 (0%)
Query: 40 ANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQS 98
A++ E DSRS+FVGN+ TPE+++ HF+ CG + R+T+ D+ G PKGY Y+EF
Sbjct: 56 AHQLEADSRSIFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESP 115
Query: 99 EAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQ 144
++AL LN EL G+++ V+ KRTN+PG +H + F +Q
Sbjct: 116 AYREKALQLNGGELKGKKIAVSRKRTNIPGFNRHYNSQNQYFQQWQ 161
>gi|149240135|ref|XP_001525943.1| hypothetical protein LELG_02501 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450066|gb|EDK44322.1| hypothetical protein LELG_02501 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 224
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 66/95 (69%), Gaps = 2/95 (2%)
Query: 39 LANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQ 97
LA +EE D RSV+VGNVDY TPE++++ F G V RVTI DKF G PKGYAYVEF
Sbjct: 57 LAKQEETDLRSVYVGNVDYQSTPEQIEELFHKVGIVERVTILFDKFSGLPKGYAYVEFQT 116
Query: 98 SEAVQEAL-HLNESELHGRQLKVTVKRTNVPGMKQ 131
E ++A+ L+ GR+L+V+ KRTN+PG ++
Sbjct: 117 PENAKKAVEELHGESFRGRELRVSEKRTNLPGFRK 151
>gi|403357954|gb|EJY78612.1| RNA-binding protein, putative [Oxytricha trifallax]
gi|403360696|gb|EJY80032.1| RNA-binding protein, putative [Oxytricha trifallax]
gi|403365989|gb|EJY82785.1| RNA-binding protein, putative [Oxytricha trifallax]
gi|403375247|gb|EJY87595.1| RNA-binding protein, putative [Oxytricha trifallax]
Length = 183
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFG-QPKGYAYVEFL 96
S ++E+ D RSVFV NVDYS P E++ HF+ CG V RVTI DK QPKG+A++EF
Sbjct: 53 SKEDQEDADERSVFVKNVDYSAEPAELKDHFKECGEVKRVTIPVDKASQQPKGHAFIEFT 112
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNVP 127
EA Q+A L +S GRQ+ V KR N+P
Sbjct: 113 TIEAAQKAKRLTDSLFKGRQITVIPKRKNIP 143
>gi|17532829|ref|NP_495021.1| Protein EEED8.12 [Caenorhabditis elegans]
gi|2500592|sp|Q09301.1|YQOC_CAEEL RecName: Full=Putative RNA-binding protein EEED8.12
gi|351060993|emb|CCD68740.1| Protein EEED8.12 [Caenorhabditis elegans]
Length = 197
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 79/125 (63%), Gaps = 6/125 (4%)
Query: 7 EMEEEATALRQMHAKVGNEMASKQDPAA-GGSSLANREEVDSRSVFVGNVDYSCTPEEVQ 65
E+E E+ L Q+ N+MA + AA + ++ +D++SVF+GNVD++ T EEV+
Sbjct: 23 EIEAESAILEQIQ----NKMAKNLESAAYVPPTEEEQKAIDAKSVFIGNVDFNSTIEEVE 78
Query: 66 QHFQSCGTVNRVTIRTDKFGQP-KGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRT 124
+HF+ CG + R TI DKF + K +AY+EF S +++ AL +N S R + VT KRT
Sbjct: 79 EHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENALVMNGSLFRSRPIVVTAKRT 138
Query: 125 NVPGM 129
N+PGM
Sbjct: 139 NIPGM 143
>gi|428173619|gb|EKX42520.1| hypothetical protein GUITHDRAFT_88058 [Guillardia theta CCMP2712]
Length = 213
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 82/138 (59%), Gaps = 8/138 (5%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGG--SSLA-----NREEVDSRSVFVG 53
M+ L + E++ L +++ + G+ A D +GG S L+ ++ E DSRS+F+G
Sbjct: 37 MQKELAKAEQQKAELDKLNKQQGSGSAGSADGKSGGEDSELSAAAAADQAERDSRSIFIG 96
Query: 54 NVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESEL 112
NVD++ + EEVQ F CG +N +TI DKF G+ KG+AY+EF +V A+ N + L
Sbjct: 97 NVDFAASVEEVQALFADCGEINAITIPVDKFTGRAKGFAYLEFADKASVLMAMEKNNALL 156
Query: 113 HGRQLKVTVKRTNVPGMK 130
R +KV KRTN+P +
Sbjct: 157 RDRAIKVVNKRTNLPSWQ 174
>gi|344228071|gb|EGV59957.1| RNA-binding domain-containing protein [Candida tenuis ATCC 10573]
Length = 242
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 67/96 (69%), Gaps = 10/96 (10%)
Query: 42 REEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEA 100
+EEVDSRSV+VGNV+++ TP ++++ F S G + R+TI D+F G PKGYAY+EF E
Sbjct: 56 QEEVDSRSVYVGNVNFTSTPVQLEEFFHSVGVIERITILFDRFTGIPKGYAYIEFNSEEG 115
Query: 101 VQEALHLNESELHG-----RQLKVTVKRTNVPGMKQ 131
Q+A+ SEL G R+LKVT KRTN PGM +
Sbjct: 116 AQKAI----SELDGKVFRNRELKVTAKRTNFPGMSR 147
>gi|308459109|ref|XP_003091880.1| hypothetical protein CRE_30217 [Caenorhabditis remanei]
gi|308254860|gb|EFO98812.1| hypothetical protein CRE_30217 [Caenorhabditis remanei]
Length = 205
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 76/129 (58%), Gaps = 12/129 (9%)
Query: 6 KEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREE----VDSRSVFVGNVDYSCTP 61
+E+E EA LR + ++ M G ++ EE +D+RSVFVGNVD+ T
Sbjct: 37 EEIEAEAKVLRDIQNRLSESMEI-------GKTVPPTEEEQKAIDARSVFVGNVDFGSTI 89
Query: 62 EEVQQHFQSCGTVNRVTIRTDKFGQP-KGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
EE++ HF+ CG + R+TI DK + K +AYVEF S +V+ A+ +N S RQ+ VT
Sbjct: 90 EELEAHFKGCGEIVRITIPKDKLTKKQKNFAYVEFESSASVENAMVMNGSAFRERQIVVT 149
Query: 121 VKRTNVPGM 129
KRTN PGM
Sbjct: 150 AKRTNKPGM 158
>gi|115533906|ref|NP_495022.2| Protein EEED8.4 [Caenorhabditis elegans]
gi|114152917|sp|Q09295.2|YQO4_CAEEL RecName: Full=Putative RNA-binding protein EEED8.4
gi|351060984|emb|CCD68731.1| Protein EEED8.4 [Caenorhabditis elegans]
Length = 191
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 78/124 (62%), Gaps = 4/124 (3%)
Query: 7 EMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQ 66
E+E E+ L+Q+ K+ + S A + ++ +D++SVF+GNVD++ T EE+++
Sbjct: 17 EIEAESAILQQIQNKMAKHLES---AAYVPPTEEEQKAIDAKSVFIGNVDFNSTIEEIEE 73
Query: 67 HFQSCGTVNRVTIRTDKFGQP-KGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTN 125
HF+ CG + + TI DKF + K +AY+EF S +++ AL +N S R + VT KRTN
Sbjct: 74 HFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENALVMNGSLFRSRPIVVTAKRTN 133
Query: 126 VPGM 129
+PGM
Sbjct: 134 IPGM 137
>gi|255725524|ref|XP_002547691.1| hypothetical protein CTRG_01998 [Candida tropicalis MYA-3404]
gi|240135582|gb|EER35136.1| hypothetical protein CTRG_01998 [Candida tropicalis MYA-3404]
Length = 137
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 65/93 (69%), Gaps = 2/93 (2%)
Query: 39 LANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQ 97
L ++E+D+RSV+VGNVDY TPE++++ F G + RVTI D+F G PKGYAY+EF
Sbjct: 20 LEKQQEIDNRSVYVGNVDYQSTPEQLEEFFHVVGVIERVTILFDRFSGLPKGYAYIEFET 79
Query: 98 SEAVQEAL-HLNESELHGRQLKVTVKRTNVPGM 129
E+ +A+ L+ E GR L+++ KRTN+PG
Sbjct: 80 EESAVKAIEELDGKEFKGRALRISKKRTNLPGF 112
>gi|297284668|ref|XP_001100533.2| PREDICTED: embryonic polyadenylate-binding protein 2-like [Macaca
mulatta]
Length = 322
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 74/131 (56%), Gaps = 4/131 (3%)
Query: 44 EVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 102
E D RSV+VGNVDY + EE++ HF CG V+RVTI DKF G PKGYAY+EF +VQ
Sbjct: 156 EADHRSVYVGNVDYGGSAEELEAHFSGCGEVHRVTILCDKFSGHPKGYAYIEFATKGSVQ 215
Query: 103 EALHLNESELHGRQLKVTVKRTNVPGMKQ--HRPRRPNPFMVYQSRGAIIPPFLYSPYGY 160
A+ L++S GR +KV PG+ + + P P + RG ++ +L
Sbjct: 216 AAVELDQSLFRGRVIKVRQCSPGAPGVFKVLEKLSSPGPVLEPALRGGLL-SWLSLDCWT 274
Query: 161 GKIPRFRMPMR 171
++P P+R
Sbjct: 275 PRLPAALTPLR 285
>gi|71993551|ref|NP_500666.2| Protein T08B6.5 [Caenorhabditis elegans]
gi|373220496|emb|CCD73994.1| Protein T08B6.5 [Caenorhabditis elegans]
Length = 177
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Query: 42 REEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEA 100
+E+ D+RSV+VGNVD+ T E+++HF CG V RVTI DKF G K +A+VEF + E+
Sbjct: 40 QEKTDARSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQKLES 99
Query: 101 VQEALHLNESELHGRQLKVTVKRTNVPGM 129
VQ AL L+ + R++ VT+KRTN PGM
Sbjct: 100 VQLALVLSGTMFRNRKIMVTLKRTNKPGM 128
>gi|149234716|ref|XP_001523237.1| hypothetical protein LELG_05463 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146453026|gb|EDK47282.1| hypothetical protein LELG_05463 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 334
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 73/114 (64%), Gaps = 4/114 (3%)
Query: 20 AKVGNEMASKQDPAAGGSSLAN--REEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRV 77
A V + A PAA +++ + E D++S+++GNVDY TP E+QQHF CG + +V
Sbjct: 156 APVSSYSAGLAHPAASSHLISDEAKRESDAKSIYIGNVDYGSTPLELQQHFSLCGIIEKV 215
Query: 78 TIRTDKF-GQPKGYAYVEFLQSEAVQEALH-LNESELHGRQLKVTVKRTNVPGM 129
TI +KF G+PKG AY+ F E+V +A+ L+ S R+LKV KRTN+PG+
Sbjct: 216 TILNNKFTGRPKGVAYLAFQDQESVDKAIATLDGSIFRDRELKVMHKRTNIPGI 269
>gi|254581722|ref|XP_002496846.1| ZYRO0D09482p [Zygosaccharomyces rouxii]
gi|238939738|emb|CAR27913.1| ZYRO0D09482p [Zygosaccharomyces rouxii]
Length = 289
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Query: 44 EVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 102
E D+RS+FVGN+ TPE +++HF CG + R+T+ DK G PKGYAYV+F SE +
Sbjct: 78 EADARSIFVGNISPDVTPEIIEEHFAECGEIKRITLLHDKHTGVPKGYAYVQFESSEVQE 137
Query: 103 EALHLNESELHGRQLKVTVKRTNVPG 128
AL LN +EL G ++ V KRTN+PG
Sbjct: 138 NALKLNGTELKGNKINVYKKRTNLPG 163
>gi|385302465|gb|EIF46595.1| polyadenylate-binding protein 2 [Dekkera bruxellensis AWRI1499]
Length = 234
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Query: 41 NREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSE 99
N+ E+D RSV+VGN+DYS T ++++ CG +NR+TI + + G+ KG+AYVEF E
Sbjct: 75 NQREIDRRSVYVGNIDYSATTADLKKVLDDCGEINRITILYNHYTGRSKGFAYVEFNDVE 134
Query: 100 AVQEALHLNESELHGRQLKVTVKRTNVPGM 129
+ A+ LN +EL+ R L + KRTN+PGM
Sbjct: 135 GAKAAIELNGTELYSRALTIQQKRTNIPGM 164
>gi|350585423|ref|XP_003356120.2| PREDICTED: embryonic polyadenylate-binding protein 2-like [Sus
scrofa]
Length = 285
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 66/113 (58%), Gaps = 2/113 (1%)
Query: 18 MHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRV 77
+ + G ++ P+ GG + E D RSV+VGNVDY T E++ +F CG ++RV
Sbjct: 123 LSPEAGRSQRARPGPSLGGWP-QQKVEADHRSVYVGNVDYEGTARELEAYFNHCGEIHRV 181
Query: 78 TIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 129
TI DKF G PKGYAY+EF + Q + L+ S G +KV KRTN PG+
Sbjct: 182 TILCDKFSGHPKGYAYIEFATESSAQAPVELDNSVFRGPVIKVLPKRTNFPGI 234
>gi|268536756|ref|XP_002633513.1| Hypothetical protein CBG05375 [Caenorhabditis briggsae]
Length = 180
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Query: 42 REEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQP-KGYAYVEFLQSEA 100
++E+DSRSVF+GNVD+ + E++++HF+ CG + R TI DKF + K +AY+EF +E+
Sbjct: 48 QKEIDSRSVFIGNVDFGSSIEDIEEHFKGCGEIIRTTIPKDKFTKKQKNFAYIEFASAES 107
Query: 101 VQEALHLNESELHGRQLKVTVKRTNVP 127
++ AL +N S RQ+ VT KRTN P
Sbjct: 108 IENALVMNGSLFRSRQIVVTAKRTNKP 134
>gi|443922030|gb|ELU41543.1| RNA recognition motif domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 203
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 77/129 (59%), Gaps = 9/129 (6%)
Query: 1 MKIRLKEMEEEATALRQMHAKV-----GNEMASKQDPAAGGSSLANREEVDSRSVFVGNV 55
MK R++EME EA LR M A+ + S A+ + E VD+RSV+VGNV
Sbjct: 23 MKARVREMEAEAEKLRTMTAQAQPGSGPGSVGSGGGDASNEFGEESAEIVDARSVYVGNV 82
Query: 56 DYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYV-EFLQSEAVQ--EALHLNESE 111
DY TPEE+Q HFQ+ GT+NR+TI DKF G PKG+ ++ F+ V+ A LN+S
Sbjct: 83 DYGATPEELQAHFQAVGTINRITILCDKFTGHPKGFVWIFWFISGLDVETGTAEVLNDSL 142
Query: 112 LHGRQLKVT 120
GR +KV+
Sbjct: 143 FRGRAIKVS 151
>gi|268536758|ref|XP_002633514.1| Hypothetical protein CBG05376 [Caenorhabditis briggsae]
Length = 182
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Query: 42 REEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQP-KGYAYVEFLQSEA 100
++E+DSRSVF+GNVD+ + E++++HF+ CG + R TI DKF + K +AY+EF +E+
Sbjct: 47 QKEIDSRSVFIGNVDFGSSIEDIEEHFKGCGEIIRTTIPKDKFTKKQKNFAYIEFASAES 106
Query: 101 VQEALHLNESELHGRQLKVTVKRTNVP 127
++ AL +N S RQ+ VT KRTN P
Sbjct: 107 IENALVMNGSLFRSRQIVVTAKRTNKP 133
>gi|302659609|ref|XP_003021492.1| small subunit of nuclear cap-binding protein complex [Trichophyton
verrucosum HKI 0517]
gi|291185395|gb|EFE40874.1| small subunit of nuclear cap-binding protein complex [Trichophyton
verrucosum HKI 0517]
Length = 126
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 63/91 (69%), Gaps = 10/91 (10%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
M+ RL +ME EA L +M A + + + ++ ++E++D+RS+FVGNVDY+ +
Sbjct: 29 MRERLTKMESEAAKLHEMQASLDQQTENLRE---------DKEDIDARSIFVGNVDYAAS 79
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGY 90
PEE+Q HFQSCG++NRVTI DKF G PKG+
Sbjct: 80 PEEIQAHFQSCGSINRVTILLDKFTGHPKGF 110
>gi|302503907|ref|XP_003013913.1| small subunit of nuclear cap-binding protein complex [Arthroderma
benhamiae CBS 112371]
gi|291177479|gb|EFE33273.1| small subunit of nuclear cap-binding protein complex [Arthroderma
benhamiae CBS 112371]
Length = 303
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 62/90 (68%), Gaps = 10/90 (11%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
M+ RL +ME EA L +M A + + + ++ ++E++D+RS+FVGNVDY+ +
Sbjct: 29 MRERLTKMESEAAKLHEMQASLDQQTENLRE---------DKEDIDARSIFVGNVDYAAS 79
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKG 89
PEE+Q HFQSCG++NRVTI DKF G PKG
Sbjct: 80 PEEIQAHFQSCGSINRVTILLDKFTGHPKG 109
>gi|326482748|gb|EGE06758.1| RNP domain-containing protein [Trichophyton equinum CBS 127.97]
Length = 122
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 63/91 (69%), Gaps = 10/91 (10%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
M+ RL +ME EA L +M A + + + ++ ++E++D+RS+FVGNVDY+ +
Sbjct: 29 MRERLTKMESEAAKLHEMQASLDQQTENLRE---------DKEDIDARSIFVGNVDYAAS 79
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGY 90
PEE+Q HFQSCG++NRVTI DKF G PKG+
Sbjct: 80 PEEIQAHFQSCGSINRVTILLDKFTGHPKGF 110
>gi|431838574|gb|ELK00506.1| Embryonic polyadenylate-binding protein 2 [Pteropus alecto]
Length = 308
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 61/97 (62%), Gaps = 2/97 (2%)
Query: 44 EVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 102
EVD RS++VGNVDY T +E++ +F CG V RVTI DKF G PKGYAYVEF +VQ
Sbjct: 182 EVDHRSIYVGNVDYGGTAKELEAYFNHCGEVQRVTILCDKFSGHPKGYAYVEFASESSVQ 241
Query: 103 EALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNP 139
A+ L+ES GR +KV V + PG + P P
Sbjct: 242 AAVELDESIFRGRVIKVHVPHES-PGHLEDALHTPPP 277
>gi|238605300|ref|XP_002396414.1| hypothetical protein MPER_03357 [Moniliophthora perniciosa FA553]
gi|215468958|gb|EEB97344.1| hypothetical protein MPER_03357 [Moniliophthora perniciosa FA553]
Length = 216
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 63/104 (60%), Gaps = 15/104 (14%)
Query: 41 NREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKG---------- 89
++ D+RS++VGN PE++Q HF +CGT+NRVTI DKF G PKG
Sbjct: 76 DKTGADNRSIYVGNTTVR-HPEDIQGHFSACGTINRVTILCDKFTGHPKGNSITEMFSKR 134
Query: 90 YAYVEFLQSEAVQEALHLNESELHGRQLK---VTVKRTNVPGMK 130
YAYVEF + E V AL ++ S HGR +K VT KRTNVPG
Sbjct: 135 YAYVEFAEPEHVDTALTMDNSLFHGRLIKVQPVTAKRTNVPGFN 178
>gi|351712927|gb|EHB15846.1| Embryonic polyadenylate-binding protein 2 [Heterocephalus glaber]
Length = 308
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 64/120 (53%), Gaps = 28/120 (23%)
Query: 39 LANRE--EVDSRSVFVGN-------------------------VDYSCTPEEVQQHFQSC 71
+A RE E D RS++VGN VDY T EE+Q HF C
Sbjct: 144 VAPRETVEADHRSIYVGNSECYCTGSWAPSPLCAENTGAVPGQVDYGGTAEELQAHFHPC 203
Query: 72 GTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMK 130
G V+RVTI DKF G PKGYAYVEF + Q A+ L+ES GR +KV KRTN PG+
Sbjct: 204 GEVHRVTILCDKFSGHPKGYAYVEFTTQLSAQAAVELDESIFRGRVIKVLPKRTNFPGIS 263
>gi|308459099|ref|XP_003091875.1| hypothetical protein CRE_30220 [Caenorhabditis remanei]
gi|308254855|gb|EFO98807.1| hypothetical protein CRE_30220 [Caenorhabditis remanei]
Length = 188
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 42 REEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQP-KGYAYVEFLQSEA 100
++E+D+RS+F+GNV++ T EE++ HF+ CG + R TI DK + K YA++EF S++
Sbjct: 49 QKEIDARSIFIGNVEFGATVEELEDHFKGCGEIVRTTIPKDKLTKKQKNYAFIEFESSDS 108
Query: 101 VQEALHLNESELHGRQLKVTVKRTNVPGM 129
V+ A+ +N S RQ+ VT KRTN PGM
Sbjct: 109 VENAMVMNGSTFRERQIVVTSKRTNKPGM 137
>gi|308459113|ref|XP_003091882.1| hypothetical protein CRE_30214 [Caenorhabditis remanei]
gi|308254862|gb|EFO98814.1| hypothetical protein CRE_30214 [Caenorhabditis remanei]
Length = 186
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 76/126 (60%), Gaps = 10/126 (7%)
Query: 6 KEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREE---VDSRSVFVGNVDYSCTPE 62
+E++ EA L+Q+ N +A+K + G L EE +D++S+FVGNV+Y T E
Sbjct: 15 EELQAEAVVLKQIQ----NRLAAKME--MGKVCLPTEEEQKVIDAKSIFVGNVEYGATTE 68
Query: 63 EVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 121
E++ HF+ CG + R TI DK + K +AYVEF + +V+ A+ +N S GR + VT
Sbjct: 69 ELEDHFKGCGEIVRTTIPKDKMTNRQKNFAYVEFECAASVENAILMNGSTFRGRPIVVTA 128
Query: 122 KRTNVP 127
KRTN P
Sbjct: 129 KRTNKP 134
>gi|260784963|ref|XP_002587533.1| hypothetical protein BRAFLDRAFT_237106 [Branchiostoma floridae]
gi|229272681|gb|EEN43544.1| hypothetical protein BRAFLDRAFT_237106 [Branchiostoma floridae]
Length = 100
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Query: 55 VDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELH 113
VDY T EE++ HF CG++NRVTI DKF G PKG+AY+EF ++++ A L++S
Sbjct: 1 VDYGATAEELEAHFHGCGSINRVTILCDKFTGHPKGFAYIEFADKDSIETAKALDDSLFR 60
Query: 114 GRQLKVTVKRTNVPGM 129
GRQ+KV KRTN PG+
Sbjct: 61 GRQIKVVPKRTNRPGV 76
>gi|355710480|gb|EHH31944.1| hypothetical protein EGK_13114 [Macaca mulatta]
Length = 241
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 44 EVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 102
E D RSV+VGNVDY + EE++ HF CG V+RVTI DKF G PKGYAY+EF +VQ
Sbjct: 156 EADHRSVYVGNVDYGGSAEELEAHFSGCGEVHRVTILCDKFSGHPKGYAYIEFATKGSVQ 215
Query: 103 EALHLNESELHGRQLKV 119
A+ L++S GR +KV
Sbjct: 216 AAVELDQSLFRGRVIKV 232
>gi|326427875|gb|EGD73445.1| hypothetical protein PTSG_05149 [Salpingoeca sp. ATCC 50818]
Length = 242
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 56/90 (62%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQ 97
S +REE D RSVFV NVDY + ++Q F+ CG V R+TI GQPKG+AYVEF
Sbjct: 111 SQESREEADRRSVFVQNVDYGTSEVDLQLFFKDCGPVRRITIGRGPTGQPKGFAYVEFTD 170
Query: 98 SEAVQEALHLNESELHGRQLKVTVKRTNVP 127
AV+ A L L GRQ+ V KRTNVP
Sbjct: 171 EAAVETAKGLTNQMLKGRQVTVLNKRTNVP 200
>gi|154341861|ref|XP_001566882.1| putative RNA-binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134064207|emb|CAM40405.1| putative RNA-binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 214
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 77/138 (55%), Gaps = 10/138 (7%)
Query: 5 LKEMEEEATALRQ-MHAKVGNEMASKQD------PAAGGSSLANREEVDSRSVFVGNVDY 57
L+EM+ + +L++ M K E A+K + AAGGSS R S+FVG++D
Sbjct: 29 LEEMKRQVDSLQEDMQLKALQESAAKDEGTRKTAAAAGGSSGQARTNT---SIFVGDLDL 85
Query: 58 SCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQL 117
T +++ F SCG + RVT+ D+ G PKG AYVEF Q A+ + LHG+ L
Sbjct: 86 RTTDADLRVFFASCGAITRVTVLKDRQGNPKGTAYVEFETEAQAQAAVLKDGQSLHGKPL 145
Query: 118 KVTVKRTNVPGMKQHRPR 135
+V +KR N+P ++ PR
Sbjct: 146 RVAMKRDNIPAFQRGLPR 163
>gi|254568026|ref|XP_002491123.1| Cytoplasmic RNA-binding protein, contains an RNA recognition motif
(RRM) [Komagataella pastoris GS115]
gi|238030920|emb|CAY68843.1| Cytoplasmic RNA-binding protein, contains an RNA recognition motif
(RRM) [Komagataella pastoris GS115]
gi|328352350|emb|CCA38749.1| Embryonic polyadenylate-binding protein 2 [Komagataella pastoris
CBS 7435]
Length = 293
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 71/118 (60%), Gaps = 6/118 (5%)
Query: 24 NEMASKQDPA----AGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTI 79
NE++ K +P G AN+ ++D RSVFVGNV S PEE+ Q G VNRVTI
Sbjct: 101 NEISPKPEPTPKLKLGEFQPANQADIDKRSVFVGNVHSSADPEELVQIMTKAGVVNRVTI 160
Query: 80 RTDKF-GQPKGYAYVEFLQSEAVQEALHL-NESELHGRQLKVTVKRTNVPGMKQHRPR 135
D + G PKGYAYVEF + +V +A+ L ++ ++L V KRTNVPG+ + PR
Sbjct: 161 LLDHYTGHPKGYAYVEFEEEASVPKAIELFHQYVFKEKELNVVPKRTNVPGLAKRHPR 218
>gi|146421021|ref|XP_001486462.1| hypothetical protein PGUG_02133 [Meyerozyma guilliermondii ATCC
6260]
gi|146389877|gb|EDK38035.1| hypothetical protein PGUG_02133 [Meyerozyma guilliermondii ATCC
6260]
Length = 159
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 76/120 (63%), Gaps = 11/120 (9%)
Query: 19 HAKVGNEMASKQDPAAG-GSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRV 77
H +V + + + Q G G L +EE+D RS++VGNV+Y TP ++++ F + GTV RV
Sbjct: 9 HQEVSHPIDNTQGTEQGRGEHLPKQEEIDQRSIYVGNVEYLSTPGQLEEFFSAVGTVERV 68
Query: 78 TIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHG-----RQLKVTVKRTNVPGMKQ 131
TI D++ G KG+AY+EF +EA + A+ ELHG R+L+++ KR N+PG ++
Sbjct: 69 TILFDRYSGLSKGFAYIEFDTTEAAERAI----EELHGKKFNERELRISPKRINLPGFRK 124
>gi|308459125|ref|XP_003091888.1| hypothetical protein CRE_30216 [Caenorhabditis remanei]
gi|308254868|gb|EFO98820.1| hypothetical protein CRE_30216 [Caenorhabditis remanei]
Length = 185
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 75/126 (59%), Gaps = 10/126 (7%)
Query: 6 KEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREE---VDSRSVFVGNVDYSCTPE 62
+E++ EA L+Q+ N +A+K + G L EE +DSRSVFVGNV++ T E
Sbjct: 15 EELQAEAVVLKQIQ----NSLAAKME--IGKVCLPTEEEQKAIDSRSVFVGNVEFGATVE 68
Query: 63 EVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 121
E++ HF+ CG + R TI DK + K +AY+EF + +V+ A +N S GR + VT
Sbjct: 69 ELETHFKGCGEIVRTTIPKDKMTNRQKNFAYIEFECAASVEYAAVMNGSTFRGRPIVVTA 128
Query: 122 KRTNVP 127
KRTN P
Sbjct: 129 KRTNKP 134
>gi|349603101|gb|AEP99036.1| Polyadenylate-binding protein 2-like protein, partial [Equus
caballus]
Length = 113
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 60 TPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLK 118
T EE++ HF CG+VNRVTI DKF G PKG+AY+EF E+V+ +L L+ES GRQ+K
Sbjct: 1 TAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIK 60
Query: 119 VTVKRTNVPGM 129
V KRTN PG+
Sbjct: 61 VIPKRTNRPGI 71
>gi|355672297|gb|AER95015.1| BCL2-like 2 [Mustela putorius furo]
Length = 216
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL 96
S+ + E D+RS++VGNVDY T EE++ HF CG+VNRVTI DKF G PKG+AY+EF
Sbjct: 147 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 206
Query: 97 QSEAVQEAL 105
E+V+ +L
Sbjct: 207 DKESVRTSL 215
>gi|344237967|gb|EGV94070.1| Embryonic polyadenylate-binding protein 2 [Cricetulus griseus]
Length = 306
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Query: 44 EVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQ 102
E D RSV+VGNVDY + E++ +F CG ++RVTI DKF G PKGYAY+EF +VQ
Sbjct: 140 EADHRSVYVGNVDYGGSAAELRAYFSPCGEIHRVTILCDKFSGHPKGYAYIEFASQNSVQ 199
Query: 103 EALHLNESELHGRQLK 118
A+ L+ES GR +K
Sbjct: 200 AAVELDESTFRGRVIK 215
>gi|294460473|gb|ADE75814.1| unknown [Picea sitchensis]
Length = 485
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 70/127 (55%), Gaps = 4/127 (3%)
Query: 43 EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAV 101
E+ DSR+VFV NV ++ T E + +HF CG V +V + TD GQPKG AY+EF E
Sbjct: 293 EDADSRTVFVSNVHFAATKEAITKHFSRCGEVVKVIMLTDVATGQPKGSAYIEFSCRETA 352
Query: 102 QEALHLNESELHGRQLKVTVKRTN--VPGMKQHRP-RRPNPFMVYQSRGAIIPPFLYSPY 158
+ AL LNE+ R LKV K + P + P RRP P+ ++ A+ L S Y
Sbjct: 353 EIALTLNETSFMSRMLKVVRKNASHVEPSIIARPPLRRPLPYSAWRPTRAVYGRGLASTY 412
Query: 159 GYGKIPR 165
G +PR
Sbjct: 413 RRGYMPR 419
>gi|118371394|ref|XP_001018896.1| polyadenylate-binding protein 2 [Tetrahymena thermophila]
gi|89300663|gb|EAR98651.1| polyadenylate-binding protein 2 [Tetrahymena thermophila SB210]
Length = 180
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 77/136 (56%), Gaps = 11/136 (8%)
Query: 31 DPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGY 90
D + ++E D RS+FV NV+Y+ T EE+ F+ CG + ++TI + GQ KG+
Sbjct: 42 DSKEKNDEIIQQKEEDKRSIFVQNVEYNTTKEELMDIFKDCGEIEKITIPQTRQGQGKGF 101
Query: 91 AYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPN------PFMVYQ 144
AY++F+ +V+ A L++S GR +KV KRTN G K+ + +PN P+M
Sbjct: 102 AYIQFVDKSSVELAKALSDSIHRGRAIKVLPKRTNQHGFKK-KSFKPNGFSKSFPYM--- 157
Query: 145 SRGAIIPPFLYSPYGY 160
+ +I+ F++ GY
Sbjct: 158 -KNSIMKGFMFGGAGY 172
>gi|308456423|ref|XP_003090653.1| hypothetical protein CRE_01432 [Caenorhabditis remanei]
gi|308261964|gb|EFP05917.1| hypothetical protein CRE_01432 [Caenorhabditis remanei]
Length = 183
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 73/128 (57%), Gaps = 10/128 (7%)
Query: 6 KEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREE---VDSRSVFVGNVDYSCTPE 62
+E++ EA L+Q+ K+ M + G +L EE +D++S+FVGNVD+ T
Sbjct: 15 EELQAEARVLKQIQTKLSETMET------GKKTLPTEEEQKSIDAKSIFVGNVDFGATVA 68
Query: 63 EVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 121
E++ HF CG + R I +K + K +AY+EF ++ + A+ +N S GR + VT
Sbjct: 69 ELEAHFYGCGQIVRTRIPKNKMTNRQKNFAYIEFECADNAENAMVMNGSTFRGRPIVVTT 128
Query: 122 KRTNVPGM 129
KRTN PGM
Sbjct: 129 KRTNKPGM 136
>gi|363752247|ref|XP_003646340.1| hypothetical protein Ecym_4483 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889975|gb|AET39523.1| hypothetical protein Ecym_4483 [Eremothecium cymbalariae
DBVPG#7215]
Length = 355
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Query: 40 ANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQS 98
A + E+D+RS+FV ++ T E ++ HF+ G +NR+TI +K G+PKGYAY+EF
Sbjct: 75 AKQVELDTRSIFVSSITPETTAETLETHFKDVGMINRITILHNKRTGEPKGYAYIEFEMV 134
Query: 99 EAVQEALHLNESELHGRQLKVTVKRTNVPGM 129
E+V +AL LN SE + + + V KRTN+PG
Sbjct: 135 ESVAKALELNGSEFNNKIITVAKKRTNLPGF 165
>gi|403363390|gb|EJY81440.1| RNA recognition motif protein [Oxytricha trifallax]
Length = 388
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEAL 105
+RS+F+ NVDY T +++ HF+ CG + R TI TDK GQP G+AY+EF E Q +
Sbjct: 224 ARSIFIKNVDYKTTKNDLEDHFKECGQITRCTIATDKHSGQPLGHAYIEFATLEGAQRSK 283
Query: 106 HLNESELHGRQLKVTVKRTNVP 127
LNES GRQ+ V KR N P
Sbjct: 284 LLNESLFKGRQITVQPKRKNKP 305
>gi|359487356|ref|XP_003633575.1| PREDICTED: uncharacterized protein LOC100855398 [Vitis vinifera]
Length = 700
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 83/154 (53%), Gaps = 21/154 (13%)
Query: 29 KQDPAAGGSSLANR--EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFG 85
K P+A GS R E+ DSR++FV NV ++ T + + +HF G V +V I TD G
Sbjct: 509 KMQPSAPGSYSTGRPLEDADSRTIFVNNVHFAATKDSLSRHFNKFGEVVKVIIVTDAATG 568
Query: 86 QPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNV-----PGMKQHRPRRPNPF 140
QPKG AYVEF++ EA + AL L+ + R LKV VKR++ PGM R R +PF
Sbjct: 569 QPKGSAYVEFMRKEAAEHALSLDGTSFMSRILKV-VKRSSTHQEAAPGMSWPRIARGSPF 627
Query: 141 MVYQSRGAIIPPFLYSPYGYGKIP---RFRMPMR 171
+ F P+ G IP R R+P++
Sbjct: 628 AAAR--------FARVPFQRG-IPGAFRARLPVK 652
>gi|297736228|emb|CBI24866.3| unnamed protein product [Vitis vinifera]
Length = 694
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 83/154 (53%), Gaps = 21/154 (13%)
Query: 29 KQDPAAGGSSLANR--EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFG 85
K P+A GS R E+ DSR++FV NV ++ T + + +HF G V +V I TD G
Sbjct: 503 KMQPSAPGSYSTGRPLEDADSRTIFVNNVHFAATKDSLSRHFNKFGEVVKVIIVTDAATG 562
Query: 86 QPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNV-----PGMKQHRPRRPNPF 140
QPKG AYVEF++ EA + AL L+ + R LKV VKR++ PGM R R +PF
Sbjct: 563 QPKGSAYVEFMRKEAAEHALSLDGTSFMSRILKV-VKRSSTHQEAAPGMSWPRIARGSPF 621
Query: 141 MVYQSRGAIIPPFLYSPYGYGKIP---RFRMPMR 171
+ F P+ G IP R R+P++
Sbjct: 622 AAAR--------FARVPFQRG-IPGAFRARLPVK 646
>gi|45187874|ref|NP_984097.1| ADR001Cp [Ashbya gossypii ATCC 10895]
gi|27475785|gb|AAO16965.1|AF384990_2 Yib1 [Eremothecium gossypii]
gi|44982658|gb|AAS51921.1| ADR001Cp [Ashbya gossypii ATCC 10895]
gi|374107313|gb|AEY96221.1| FADR001Cp [Ashbya gossypii FDAG1]
Length = 324
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 69/109 (63%), Gaps = 3/109 (2%)
Query: 40 ANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQS 98
A + E+DSRSVFV ++ T E +++HF+ G ++R+TI +K G+PKGYAY++F
Sbjct: 75 AKQVELDSRSVFVSSITPEATAEMLEEHFKDVGVISRITILYNKKTGEPKGYAYIQFESI 134
Query: 99 EAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRG 147
+V++AL L+ S +G + V KRTN+PG +RP P+ + + G
Sbjct: 135 SSVEKALQLDGSSFNGNTISVAKKRTNLPGF--NRPFNYYPYQQFHAHG 181
>gi|357457685|ref|XP_003599123.1| Polyadenylate-binding protein 2-A [Medicago truncatula]
gi|355488171|gb|AES69374.1| Polyadenylate-binding protein 2-A [Medicago truncatula]
Length = 685
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 80/144 (55%), Gaps = 14/144 (9%)
Query: 36 GSSLANR--EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKGYAY 92
GSS+A R E+VDSR++FV NV ++ T + + +HF G V +V I TD GQPKG AY
Sbjct: 497 GSSVAGRPTEDVDSRTIFVSNVHFAATKDALSRHFNKFGEVLKVIIVTDAATGQPKGAAY 556
Query: 93 VEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPP 152
VEF+ EA AL L+ + R LKV VK++ P ++ P P + RG+ P
Sbjct: 557 VEFMLKEAADNALSLDGTSFMSRILKV-VKKSAAPAQQESAPTTTWPHV----RGSPFPT 611
Query: 153 --FLYSPYGYGKIP---RFRMPMR 171
F P+ G IP R R PM+
Sbjct: 612 ARFPRPPFARG-IPGSFRPRPPMK 634
>gi|345800807|ref|XP_851081.2| PREDICTED: LOW QUALITY PROTEIN: embryonic polyadenylate-binding
protein 2 [Canis lupus familiaris]
Length = 310
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 61/97 (62%), Gaps = 11/97 (11%)
Query: 44 EVDSRSVFVGN-VDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPK--------GYAYV 93
E D RS++VGN VDY T EE++ +F CG V+RVTI DKF G P+ GYAY+
Sbjct: 165 ESDHRSIYVGNXVDYGSTAEELEAYFNPCGEVHRVTILCDKFSGHPQGVSASQAAGYAYI 224
Query: 94 EFLQSEAVQEALHLNESELHGRQLKV-TVKRTNVPGM 129
EF + Q A+ L++S GR +KV +RTN+PG+
Sbjct: 225 EFAAKSSAQAAVELDQSIFRGRVIKVCAAQRTNLPGI 261
>gi|356528571|ref|XP_003532874.1| PREDICTED: uncharacterized protein LOC100817963 [Glycine max]
Length = 493
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 67/120 (55%), Gaps = 7/120 (5%)
Query: 28 SKQDPAAGGSSLANR--EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KF 84
SK A GS+ A R E+VDSR++FV NV ++ T + + +HF G V +V I TD
Sbjct: 299 SKAHLTASGSNAAGRPSEDVDSRTIFVSNVHFAATKDGLSRHFNRFGEVLKVIIVTDAAT 358
Query: 85 GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRT----NVPGMKQHRPRRPNPF 140
GQPKG AYVEF++ EA AL L+ + R LKV K + P M R R +PF
Sbjct: 359 GQPKGAAYVEFMRKEAADNALSLDNTSFMSRILKVIKKSATTQESAPAMAWPRIVRGSPF 418
>gi|359075107|ref|XP_002694906.2| PREDICTED: embryonic polyadenylate-binding protein 2 [Bos taurus]
Length = 319
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Query: 55 VDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELH 113
VDY T +E++ +F CG ++RVTI DKF G PKGYAY+EF + Q A+ L++S
Sbjct: 195 VDYGGTAQELEAYFNHCGEIHRVTILCDKFSGHPKGYAYIEFATESSAQAAVELDKSIFR 254
Query: 114 GRQLKVTVKRTNVPGM 129
GR +KV KRTN+PG+
Sbjct: 255 GRVIKVLPKRTNLPGI 270
>gi|223999207|ref|XP_002289276.1| poly-a binding protein [Thalassiosira pseudonana CCMP1335]
gi|220974484|gb|EED92813.1| poly-a binding protein [Thalassiosira pseudonana CCMP1335]
Length = 140
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
++ +K MEEEA + Q + A+ A + D S++VG VDYS T
Sbjct: 25 LQAEIKRMEEEAARIAQETEDLEKPAAAAGGGGEKKDGAAEKASKDGHSIYVGQVDYSTT 84
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEF 95
PEE+ HF+SCGTV RVTI DKF G+PKG+AY+EF
Sbjct: 85 PEELLAHFESCGTVERVTIVCDKFTGKPKGFAYLEF 120
>gi|50290735|ref|XP_447800.1| hypothetical protein [Candida glabrata CBS 138]
gi|38603385|dbj|BAD02472.1| hypothetical protein [Candida glabrata]
gi|49527111|emb|CAG60749.1| unnamed protein product [Candida glabrata]
Length = 144
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 44 EVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPK-GYAYVEFLQSEAVQ 102
E D+ S+++GN+ TPEE+ +HF+SCG + R+T+ DK P GYAYVEF ++
Sbjct: 41 EADACSIYIGNISLDTTPEEIDEHFKSCGVIKRITMLYDKNTGPSIGYAYVEFDSIDSRD 100
Query: 103 EALHLNESELHGRQLKVTVKRTNVPGMKQH 132
+AL N + L + V KRTN+P KQ+
Sbjct: 101 KALDFNGTNLRQHVISVERKRTNIPNYKQN 130
>gi|215765000|dbj|BAG86697.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 70/129 (54%), Gaps = 4/129 (3%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
+K++LK++E + LR A++ N KQ + G E+ DSR+V V NV ++ T
Sbjct: 188 VKLKLKQVELDVLKLRSKQAQINN---VKQGFLSSGPHANLDEDADSRTVLVTNVHFAAT 244
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
E + HF CGTV ++ I TD G PKG A+V F E+V++A+ L+ S R L V
Sbjct: 245 KEALSGHFMKCGTVLKINILTDAISGHPKGAAFVTFTDKESVEKAVSLSGSSFFSRVLTV 304
Query: 120 TVKRTNVPG 128
K PG
Sbjct: 305 MRKAEAPPG 313
>gi|218194572|gb|EEC76999.1| hypothetical protein OsI_15321 [Oryza sativa Indica Group]
Length = 366
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 70/129 (54%), Gaps = 4/129 (3%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
+K++LK++E + LR A++ N KQ + G E+ DSR+V V NV ++ T
Sbjct: 188 VKLKLKQVELDVLKLRSKQAQINN---VKQGFLSSGPHANLDEDADSRTVLVTNVHFAAT 244
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
E + HF CGTV ++ I TD G PKG A+V F E+V++A+ L+ S R L V
Sbjct: 245 KEALSGHFMKCGTVLKINILTDAISGHPKGAAFVTFTDKESVEKAVSLSGSSFFSRVLTV 304
Query: 120 TVKRTNVPG 128
K PG
Sbjct: 305 MRKAEAPPG 313
>gi|255716954|ref|XP_002554758.1| KLTH0F13090p [Lachancea thermotolerans]
gi|238936141|emb|CAR24321.1| KLTH0F13090p [Lachancea thermotolerans CBS 6340]
Length = 145
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 80/136 (58%), Gaps = 3/136 (2%)
Query: 5 LKEMEEEATALRQMHAKVGNEMASKQDPAAGGSS--LANREEVDSRSVFVGNVDYSCTPE 62
L + E R++ A +++ S+ S ++ + + D+RS+F+ N+ +
Sbjct: 10 LTYLNEWNMNTRKIQASTPHKVKSQSCKVVSKSENEISEQRKTDARSIFLRNIPVDISIN 69
Query: 63 EVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVK 122
++ HF+ GT+NRVTI T++ GYAY+EF + + +AL LN SEL G +++VT K
Sbjct: 70 LLEDHFKLYGTINRVTIFTNRKTFNLGYAYIEFEEDCSADQALDLNNSELCGHKIEVTKK 129
Query: 123 RTNVPGMKQHRPRRPN 138
RTN+PG+++ +P + N
Sbjct: 130 RTNLPGIRR-KPYKKN 144
>gi|323304471|gb|EGA58240.1| Sgn1p [Saccharomyces cerevisiae FostersB]
Length = 141
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 40 ANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQS 98
A++ E DSRS+FVGN+ TPE+++ HF+ CG + R+T+ D+ G PKGY Y+EF
Sbjct: 56 AHQLEADSRSIFVGNITPDVTPEQIEDHFKBCGQIKRITLLYDRNTGTPKGYGYIEFESP 115
Query: 99 EAVQEALHLNESELHGRQLKVTVKR 123
++AL LN EL G+++ K+
Sbjct: 116 AYXEKALQLNGGELKGKKISCLQKK 140
>gi|308456413|ref|XP_003090648.1| hypothetical protein CRE_01435 [Caenorhabditis remanei]
gi|308261959|gb|EFP05912.1| hypothetical protein CRE_01435 [Caenorhabditis remanei]
Length = 197
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 72/140 (51%), Gaps = 23/140 (16%)
Query: 7 EMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREE---VDSRSVFVGNVDYSCTPEE 63
E+E EA L+++ K+ M G S EE +D++S+FVGNVD+ T E
Sbjct: 17 EIEAEARVLKEIQMKLSETMD------VGKVSSPTEEEQKAIDAKSIFVGNVDFGATVAE 70
Query: 64 VQQHFQSCGTVNRVTI--------------RTDKFGQPKGYAYVEFLQSEAVQEALHLNE 109
++ HF+ CG + R+TI + + YA++EF + +V A+ +N
Sbjct: 71 LEAHFKGCGEIVRITIPKDKITKKQKKYVKEVKEILLSEYYAFIEFESAGSVANAIVMNG 130
Query: 110 SELHGRQLKVTVKRTNVPGM 129
S RQ+ VT+KRTN PGM
Sbjct: 131 STFRERQIVVTLKRTNKPGM 150
>gi|410084060|ref|XP_003959607.1| hypothetical protein KAFR_0K01170 [Kazachstania africana CBS 2517]
gi|372466199|emb|CCF60472.1| hypothetical protein KAFR_0K01170 [Kazachstania africana CBS 2517]
Length = 141
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 62/95 (65%), Gaps = 7/95 (7%)
Query: 37 SSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTI----RTDKFGQPKGYAY 92
+ +A + + DS+S+FV N+ TPE +++HF+ CG++ R+TI T+KF GYAY
Sbjct: 36 TKMAVQRDADSKSIFVRNIHSDTTPEIIEEHFKECGSIKRITILCNKSTNKFN---GYAY 92
Query: 93 VEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVP 127
+EF E ++AL L+ +EL+G ++ V KRTN P
Sbjct: 93 IEFDSREKREQALLLDNTELNGCKISVLRKRTNRP 127
>gi|115457640|ref|NP_001052420.1| Os04g0306800 [Oryza sativa Japonica Group]
gi|38347198|emb|CAD40523.2| OSJNBa0023J03.10 [Oryza sativa Japonica Group]
gi|113563991|dbj|BAF14334.1| Os04g0306800 [Oryza sativa Japonica Group]
gi|116308926|emb|CAH66055.1| OSIGBa0125J07.4 [Oryza sativa Indica Group]
gi|116309108|emb|CAH66214.1| OSIGBa0096F13.9 [Oryza sativa Indica Group]
gi|215695292|dbj|BAG90483.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222628583|gb|EEE60715.1| hypothetical protein OsJ_14219 [Oryza sativa Japonica Group]
Length = 649
Score = 79.0 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 48/129 (37%), Positives = 70/129 (54%), Gaps = 4/129 (3%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
+K++LK++E + LR A++ N KQ + G E+ DSR+V V NV ++ T
Sbjct: 471 VKLKLKQVELDVLKLRSKQAQINN---VKQGFLSSGPHANLDEDADSRTVLVTNVHFAAT 527
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
E + HF CGTV ++ I TD G PKG A+V F E+V++A+ L+ S R L V
Sbjct: 528 KEALSGHFMKCGTVLKINILTDAISGHPKGAAFVTFTDKESVEKAVSLSGSSFFSRVLTV 587
Query: 120 TVKRTNVPG 128
K PG
Sbjct: 588 MRKAEAPPG 596
>gi|89266850|emb|CAJ83915.1| novel protein containing RNA recognition motifs. (a.k.a. RRM, RBD,
or RNP domain) [Xenopus (Silurana) tropicalis]
Length = 406
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 79/156 (50%), Gaps = 22/156 (14%)
Query: 3 IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPE 62
I K+ + AL++ A+VG+ + D A+ SS N+ RS F+GN+ Y E
Sbjct: 231 IVFKDESSASQALKRNGAEVGSGFHIRVDIASKRSSHDNK-----RSAFIGNLPYEIEEE 285
Query: 63 EVQQHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV-- 119
V+ HF CG V V IR K G KG+ YV F ++AVQ AL LN SEL GR+++V
Sbjct: 286 AVRDHFSECGKVQGVRIIRDQKTGIGKGFGYVLFESADAVQLALKLNNSELSGRKIRVKR 345
Query: 120 ------TVKRTN--------VPGMKQHRPRRPNPFM 141
K TN + +KQ +P + N F+
Sbjct: 346 SLTAEAAQKSTNKSSDFKKKLDTLKQAKPLKGNSFV 381
>gi|52345686|ref|NP_001004890.1| RNA binding motif protein 34 [Xenopus (Silurana) tropicalis]
gi|49523226|gb|AAH75294.1| MGC88935 protein [Xenopus (Silurana) tropicalis]
Length = 412
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 79/156 (50%), Gaps = 22/156 (14%)
Query: 3 IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPE 62
I K+ + AL++ A+VG+ + D A+ SS N+ RS F+GN+ Y E
Sbjct: 231 IVFKDESSASQALKRNGAEVGSGFHIRVDIASKRSSHDNK-----RSAFIGNLPYEIEEE 285
Query: 63 EVQQHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV-- 119
V+ HF CG V V IR K G KG+ YV F ++AVQ AL LN SEL GR+++V
Sbjct: 286 AVRDHFSECGKVQGVRIIRDQKTGIGKGFGYVLFESADAVQLALKLNNSELSGRKIRVKR 345
Query: 120 ------TVKRTN--------VPGMKQHRPRRPNPFM 141
K TN + +KQ +P + N F+
Sbjct: 346 SLTAEAAQKSTNKSSDFKKKLDTLKQAKPLKGNSFV 381
>gi|357162450|ref|XP_003579415.1| PREDICTED: uncharacterized protein LOC100842396 [Brachypodium
distachyon]
Length = 641
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 20/177 (11%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
+K++LK+ME + LR A++ N KQ G + ++ DSR+V V NV ++ T
Sbjct: 464 VKLKLKQMELDMLKLRSKQAQINN---GKQGAPPSGPNSNLEDDADSRTVLVTNVHFAAT 520
Query: 61 PEEVQQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
E + HF CG V + + TD G PKG A+V F E++ A+ L+ + + R L V
Sbjct: 521 KEALSTHFMKCGRVLKNIVLTDANTGHPKGAAFVTFADKESIGRAISLSGTSFYSRVLTV 580
Query: 120 TVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 176
K PG F+V + + P+ P+ G P+ R S Y+
Sbjct: 581 VRKAEAPPG-----------FLVSVQQTGMPQPWNSPPFQKGASPK-----RLSSYH 621
>gi|260951495|ref|XP_002620044.1| hypothetical protein CLUG_01203 [Clavispora lusitaniae ATCC 42720]
gi|238847616|gb|EEQ37080.1| hypothetical protein CLUG_01203 [Clavispora lusitaniae ATCC 42720]
Length = 219
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 71/127 (55%), Gaps = 9/127 (7%)
Query: 4 RLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEE 63
+L E+E EA LR + +++ + S + + +VDSRSV++GN+ T E
Sbjct: 62 QLTELEREAAMLRDISSQLDDISNSTMNKVS-------TSDVDSRSVYIGNLHRDVTALE 114
Query: 64 VQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL-HLNESELHGRQLKVTV 121
+ F S V RVTI +DK G P GYAY+EF E +A+ ++ + L GR+LKV
Sbjct: 115 LALRFSSNEDVVRVTILSDKTTGLPNGYAYLEFSSVEGASQAMARMDGTPLRGRKLKVRW 174
Query: 122 KRTNVPG 128
KRTN+ G
Sbjct: 175 KRTNIFG 181
>gi|356555297|ref|XP_003545970.1| PREDICTED: uncharacterized protein LOC100787464 [Glycine max]
Length = 481
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 75/134 (55%), Gaps = 11/134 (8%)
Query: 43 EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAV 101
E+VDSR++FV NV ++ T + + +HF G V +V I TD GQPKG AYVEF++ EA
Sbjct: 301 EDVDSRTIFVSNVHFAATKDGLSRHFNRFGDVLKVIIVTDAATGQPKGAAYVEFMRKEAA 360
Query: 102 QEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYS----P 157
AL L+ + R LKV +K++ P ++ P P +V +G+ P +S P
Sbjct: 361 DNALSLDNTSFMSRILKV-IKKSATP--QESAPAMAWPRIV---KGSPFPSARFSRHPFP 414
Query: 158 YGYGKIPRFRMPMR 171
G + R R P++
Sbjct: 415 RGIPGVFRARPPIK 428
>gi|308448720|ref|XP_003087733.1| hypothetical protein CRE_13229 [Caenorhabditis remanei]
gi|308253205|gb|EFO97157.1| hypothetical protein CRE_13229 [Caenorhabditis remanei]
Length = 194
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 72/137 (52%), Gaps = 20/137 (14%)
Query: 7 EMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREE---VDSRSVFVGNVDYSCTPEE 63
E+E EA L+++ K+ M G S EE +D++S+FVGNVD+ T E
Sbjct: 17 EIEAEARVLKEIQMKLSETMD------VGKVSSPTEEEQKAIDAKSIFVGNVDFGATVAE 70
Query: 64 VQQHFQSCGTVNRVTI-----------RTDKFGQPKGYAYVEFLQSEAVQEALHLNESEL 112
++ HF+ CG + R+TI + + +A++EF + +V A+ +N S
Sbjct: 71 LEAHFKGCGEIVRITIPKDKITKKQKKYVKEVKEILFHAFIEFECAASVANAIVMNGSTF 130
Query: 113 HGRQLKVTVKRTNVPGM 129
RQ+ VT+KRTN PGM
Sbjct: 131 RERQIVVTLKRTNKPGM 147
>gi|343471000|emb|CCD16472.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 212
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 69/148 (46%), Gaps = 20/148 (13%)
Query: 3 IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPE 62
+RLK ++E A GN + + SVFVG +D T
Sbjct: 37 LRLKALQETAAQDEGQRKSTGNTFSK------------------NASVFVGGMDPRTTES 78
Query: 63 EVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 121
+++ F CGT+ R+T+ DKF GQ KG AY+EF E A+ N LHG+ L V V
Sbjct: 79 DLRVFFSGCGTIKRLTMLRDKFTGQQKGTAYIEFDTVEQATSAIVKNGQSLHGKPLTVAV 138
Query: 122 KRTNVPGMKQHRPRRPN-PFMVYQSRGA 148
KR NVP ++ R P P Y+ GA
Sbjct: 139 KRDNVPAFQRGRGGAPGFPRGGYRGGGA 166
>gi|326513590|dbj|BAJ87814.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 644
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 68/129 (52%), Gaps = 4/129 (3%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
+K++LK++E + LR A++ N KQ G E+ D+R+V V NV ++ T
Sbjct: 467 VKLKLKQVELDMLKLRSKQAQINN---GKQGALPSGPHSNLEEDADARTVLVTNVHFAAT 523
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
E + HF CGTV ++ + TD G PKG A+V F E++ AL L+ + + R L V
Sbjct: 524 KEALSTHFMKCGTVLKLNMLTDAITGHPKGAAFVTFADKESIGRALSLSGTSFYSRVLTV 583
Query: 120 TVKRTNVPG 128
K PG
Sbjct: 584 MRKAEAPPG 592
>gi|444313531|ref|XP_004177423.1| hypothetical protein TBLA_0A01040 [Tetrapisispora blattae CBS 6284]
gi|387510462|emb|CCH57904.1| hypothetical protein TBLA_0A01040 [Tetrapisispora blattae CBS 6284]
Length = 145
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
Query: 37 SSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFG-QPKGYAYVEF 95
S+ + E D S+F+GN+D S TP+ +++HF+ G + R+T+ D KGYAYVEF
Sbjct: 26 SNFETQAEADKCSIFIGNIDPSVTPDVIEEHFKVSGQIKRITLFGDGHASHSKGYAYVEF 85
Query: 96 LQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQH 132
+ + AL LN S L+ +++ V KRTN+P K++
Sbjct: 86 ISPSGQENALKLNGSVLNNKRIIVQKKRTNLPRYKRN 122
>gi|323337227|gb|EGA78481.1| Sgn1p [Saccharomyces cerevisiae Vin13]
Length = 166
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 40 ANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQS 98
A++ E DSRS+FVGN+ TPE+++ HF+ CG + R+T+ D+ G PKGY Y+EF
Sbjct: 56 AHQLEADSRSIFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESP 115
Query: 99 EAVQEALHLNESELHGRQ 116
++AL LN EL G++
Sbjct: 116 AYREKALQLNGGELKGKK 133
>gi|342181601|emb|CCC91081.1| putative RNA-binding protein RBP14 [Trypanosoma congolense IL3000]
Length = 274
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 69/148 (46%), Gaps = 20/148 (13%)
Query: 3 IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPE 62
+RLK ++E A GN + + SVFVG +D T
Sbjct: 99 LRLKALQETAAQDEGQRKSTGNTFSK------------------NASVFVGGMDPRTTES 140
Query: 63 EVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 121
+++ F CGT+ R+T+ DKF GQ KG AY+EF E A+ N LHG+ L V V
Sbjct: 141 DLRVFFSGCGTIKRLTMLRDKFTGQQKGTAYIEFDTVEQATSAIVKNGQSLHGKPLTVAV 200
Query: 122 KRTNVPGMKQHRPRRPN-PFMVYQSRGA 148
KR N+P ++ R P P Y+ GA
Sbjct: 201 KRDNIPAFQRGRGGAPGFPRGGYRGGGA 228
>gi|323354513|gb|EGA86350.1| Sgn1p [Saccharomyces cerevisiae VL3]
gi|365765027|gb|EHN06542.1| Sgn1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 141
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 40 ANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQS 98
A++ E DSRS+FVGN+ TPE+++ HF+ CG + R+T+ D+ G PKGY Y+EF
Sbjct: 56 AHQLEADSRSIFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESP 115
Query: 99 EAVQEALHLNESELHGRQ 116
++AL LN EL G++
Sbjct: 116 AYREKALQLNGGELKGKK 133
>gi|359497153|ref|XP_002267022.2| PREDICTED: uncharacterized protein LOC100245696 [Vitis vinifera]
gi|296084732|emb|CBI25873.3| unnamed protein product [Vitis vinifera]
Length = 122
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/55 (69%), Positives = 43/55 (78%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNV 55
MK RLKEMEEEA ALR+M AKV EM + QDPA+ + AN+EE DSRSVFVGNV
Sbjct: 46 MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPASAAVTQANKEEADSRSVFVGNV 100
>gi|157872658|ref|XP_001684864.1| putative RNA-binding protein [Leishmania major strain Friedlin]
gi|68127934|emb|CAJ06567.1| putative RNA-binding protein [Leishmania major strain Friedlin]
Length = 216
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLN 108
S+FVG++D T +++ F SCG + RVT+ D+ G PKG AYVEF A+ +
Sbjct: 77 SIFVGDLDLRTTDADLRVFFASCGAITRVTVLKDRQGNPKGTAYVEFETEGQAHAAILKD 136
Query: 109 ESELHGRQLKVTVKRTNVPGMKQHRPR 135
LHG+ LKV +KR N+P ++ R
Sbjct: 137 GQSLHGKPLKVAMKRDNIPAFQRGISR 163
>gi|401425835|ref|XP_003877402.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322493647|emb|CBZ28937.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 216
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLN 108
S+FVG++D T +++ F SCG + RVT+ D+ G PKG AYVEF A+ +
Sbjct: 77 SIFVGDLDLRTTDADLRVFFASCGAITRVTVLKDRQGNPKGTAYVEFETEGQAHAAILKD 136
Query: 109 ESELHGRQLKVTVKRTNVPGMKQHRPR 135
LHG+ LKV +KR N+P ++ R
Sbjct: 137 GQSLHGKPLKVAMKRDNIPAFQRGISR 163
>gi|357164112|ref|XP_003579952.1| PREDICTED: uncharacterized protein LOC100837530 [Brachypodium
distachyon]
Length = 689
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 67/120 (55%), Gaps = 11/120 (9%)
Query: 29 KQDPAAGGSSLANREEV--DSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-G 85
K AGGS + E DSR+VFV NV ++ T + + +HF G V + I TD G
Sbjct: 491 KASSVAGGSHSTGQPEGGPDSRTVFVNNVHFAATKDALSRHFNKFGAVLKTLIVTDGVTG 550
Query: 86 QPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNV-----PGMKQHRPRRPNPF 140
QP G AY+EFLQ E+ ++AL LN + R LKV V+R++V PG R R +PF
Sbjct: 551 QPTGSAYIEFLQKESAEQALTLNGTSFMSRILKV-VRRSSVEVPQLPGWS--RASRGSPF 607
>gi|398019614|ref|XP_003862971.1| RNA-binding protein, putative [Leishmania donovani]
gi|322501202|emb|CBZ36281.1| RNA-binding protein, putative [Leishmania donovani]
Length = 214
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLN 108
S+FVG++D T +++ F SCG + RVT+ D+ G PKG AYVEF A+ +
Sbjct: 77 SIFVGDLDLRTTDADLRVFFASCGAITRVTVLKDRQGNPKGTAYVEFETEGQAHAAILKD 136
Query: 109 ESELHGRQLKVTVKRTNVPGMKQHRPR 135
LHG+ LKV +KR N+P ++ R
Sbjct: 137 GQSLHGKPLKVAMKRDNIPAFQRGISR 163
>gi|146093988|ref|XP_001467105.1| putative RNA-binding protein [Leishmania infantum JPCM5]
gi|134071469|emb|CAM70158.1| putative RNA-binding protein [Leishmania infantum JPCM5]
Length = 216
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLN 108
S+FVG++D T +++ F SCG + RVT+ D+ G PKG AYVEF A+ +
Sbjct: 77 SIFVGDLDLRTTDADLRVFFASCGAITRVTVLKDRQGNPKGTAYVEFETEGQAHAAILKD 136
Query: 109 ESELHGRQLKVTVKRTNVPGMKQHRPR 135
LHG+ LKV +KR N+P ++ R
Sbjct: 137 GQSLHGKPLKVAMKRDNIPAFQRGISR 163
>gi|147898640|ref|NP_001085272.1| RNA binding motif protein 34 [Xenopus laevis]
gi|62185676|gb|AAH92323.1| LOC443584 protein [Xenopus laevis]
Length = 414
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 77/155 (49%), Gaps = 21/155 (13%)
Query: 3 IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPE 62
+ K+ + AL + A+VG+ + D A+ SS N+ RS FVGN+ Y E
Sbjct: 233 VVFKDESSASKALMRNGAEVGSGFHIRVDMASKSSSHDNK-----RSAFVGNLPYDIEEE 287
Query: 63 EVQQHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV-- 119
+++HF CG V V IR K G KG+ YV F ++AVQ AL LN S+L GR+++V
Sbjct: 288 SIRKHFSQCGDVQGVRIIRDQKTGIGKGFGYVLFESADAVQLALKLNNSQLSGRRIRVKR 347
Query: 120 ------TVKRTNVPGMKQH-------RPRRPNPFM 141
K TN KQ +P + N F+
Sbjct: 348 SVTAEAAQKSTNKTSFKQKLDTLNQTKPIKANSFV 382
>gi|440302481|gb|ELP94788.1| RNA-binding protein SGN1, putative [Entamoeba invadens IP1]
Length = 191
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 42 REEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAV 101
++E D+RS+ V N+DYS T E+++Q F + G V VTI DK G+PK YAY+E E+
Sbjct: 57 QKERDNRSICVRNLDYSITKEQLEQLFSTVGDVKTVTIPVDKAGKPKAYAYIELDSVESR 116
Query: 102 QEAL-HLNESELHGRQLKVTVKRTNVPGM 129
+ A+ L S+L+ R++ V KRTN G+
Sbjct: 117 ERAVTSLTGSKLNDREITVEKKRTNKMGL 145
>gi|123417547|ref|XP_001305136.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121886636|gb|EAX92206.1| hypothetical protein TVAG_107400 [Trichomonas vaginalis G3]
Length = 144
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 58/105 (55%), Gaps = 5/105 (4%)
Query: 32 PAAGGSSLANREEV----DSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQP 87
P A ++ A EV D S++VGN+D S T E+++ HF CG + ++TI T +
Sbjct: 33 PQAQNTAEAENAEVEKPKDENSIWVGNLDASVTQEKLENHFSCCGKIKKLTIPTKQNPHA 92
Query: 88 KGYAYVEFLQSEAVQEALH-LNESELHGRQLKVTVKRTNVPGMKQ 131
YAY+EF EA Q A+ LN GR L + KR N PGM++
Sbjct: 93 PKYAYIEFDSKEAAQLAIDSLNNHLFSGRNLNIKPKRENRPGMRR 137
>gi|345326998|ref|XP_001512144.2| PREDICTED: RNA-binding protein 34-like [Ornithorhynchus anatinus]
Length = 416
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 46 DSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEA 104
D RSVFVGN+ Y VQ+HF CG V V I D G KG+ YV F ++AVQ A
Sbjct: 273 DKRSVFVGNLAYKIEEASVQEHFSDCGQVVAVRIVRDGVTGAGKGFGYVLFANTDAVQLA 332
Query: 105 LHLNESELHGRQLKV 119
L LN SEL GR+L+V
Sbjct: 333 LKLNNSELMGRKLRV 347
>gi|49114983|gb|AAH72838.1| LOC443584 protein, partial [Xenopus laevis]
Length = 403
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 77/155 (49%), Gaps = 21/155 (13%)
Query: 3 IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPE 62
+ K+ + AL + A+VG+ + D A+ SS N+ RS FVGN+ Y E
Sbjct: 233 VVFKDESSASKALMRNGAEVGSGFHIRVDMASKSSSHDNK-----RSAFVGNLPYDIEEE 287
Query: 63 EVQQHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV-- 119
+++HF CG V V IR K G KG+ YV F ++AVQ AL LN S+L GR+++V
Sbjct: 288 SIRKHFSQCGDVQGVRIIRDQKTGIGKGFGYVLFESADAVQLALKLNNSQLSGRRIRVKR 347
Query: 120 ------TVKRTNVPGMKQH-------RPRRPNPFM 141
K TN KQ +P + N F+
Sbjct: 348 SVTAEAVQKSTNKTSFKQKLDTLNQTKPIKGNSFV 382
>gi|83032973|ref|XP_729274.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23486584|gb|EAA20839.1| RNA recognition motif [Plasmodium yoelii yoelii]
Length = 77
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 53 GNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESE 111
GNVDYS PEE+Q F CG +NRVTI +K G KGYAY+EF +V+ AL L+ES
Sbjct: 7 GNVDYSTQPEELQSLFSECGIINRVTILVNKNTGHSKGYAYIEFADPSSVRTALSLSESF 66
Query: 112 LHGRQLKVTV 121
RQ+KV +
Sbjct: 67 FKKRQIKVCL 76
>gi|397508184|ref|XP_003824546.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 34 [Pan
paniscus]
Length = 459
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 72/137 (52%), Gaps = 10/137 (7%)
Query: 5 LKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEV 64
KE AL++ A++ + + D A+ SS D RSVFVGN+ Y V
Sbjct: 279 FKEESAATQALKRNGAQIADGFRIRVDLASETSSR------DKRSVFVGNLPYKVEESAV 332
Query: 65 QQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKR 123
++HF CG++ V I DK G KG+ YV F +++V AL LN SEL GR+L+V ++
Sbjct: 333 EKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRV-MRS 391
Query: 124 TNVPGMKQH--RPRRPN 138
N +KQ PR N
Sbjct: 392 VNKEKLKQQNSNPRLKN 408
>gi|116310267|emb|CAH67273.1| B0806H07.2 [Oryza sativa Indica Group]
gi|116310423|emb|CAH67430.1| H0305E08.1 [Oryza sativa Indica Group]
Length = 690
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 66/131 (50%), Gaps = 12/131 (9%)
Query: 45 VDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEA 104
DSR+VF+ NV ++ T + + +HF G V + I TD GQP G AY+EFL E+ ++A
Sbjct: 512 TDSRTVFLSNVHFAATKDALSRHFNKFGAVLKTLIVTDIAGQPTGSAYIEFLHKESAEQA 571
Query: 105 LHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLY-SPYGYGKI 163
L L+ + R LKV K + + PR SRG+ P L + Y
Sbjct: 572 LTLDNTSFMSRMLKVVRKNSLEVSQQSGWPR--------GSRGSTFPSRLTRTAYPRPAF 623
Query: 164 P---RFRMPMR 171
P R R+P+R
Sbjct: 624 PGAMRGRLPLR 634
>gi|38344812|emb|CAE02868.2| OSJNBb0022F23.5 [Oryza sativa Japonica Group]
Length = 690
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 66/131 (50%), Gaps = 12/131 (9%)
Query: 45 VDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEA 104
DSR+VF+ NV ++ T + + +HF G V + I TD GQP G AY+EFL E+ ++A
Sbjct: 512 TDSRTVFLSNVHFAATKDALSRHFNKFGAVLKTLIVTDIAGQPTGSAYIEFLHKESAEQA 571
Query: 105 LHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLY-SPYGYGKI 163
L L+ + R LKV K + + PR SRG+ P L + Y
Sbjct: 572 LTLDNTSFMSRMLKVVRKNSLEVSQQSGWPR--------GSRGSTFPSRLTRTAYPRPAF 623
Query: 164 P---RFRMPMR 171
P R R+P+R
Sbjct: 624 PGAMRGRLPLR 634
>gi|125548679|gb|EAY94501.1| hypothetical protein OsI_16274 [Oryza sativa Indica Group]
Length = 429
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 66/131 (50%), Gaps = 12/131 (9%)
Query: 45 VDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEA 104
DSR+VF+ NV ++ T + + +HF G V + I TD GQP G AY+EFL E+ ++A
Sbjct: 251 TDSRTVFLSNVHFAATKDALSRHFNKFGAVLKTLIVTDIAGQPTGSAYIEFLHKESAEQA 310
Query: 105 LHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLY-SPYGYGKI 163
L L+ + R LKV K + + PR SRG+ P L + Y
Sbjct: 311 LTLDNTSFMSRMLKVVRKNSLEVSQQSGWPR--------GSRGSTFPSRLTRTAYPRPAF 362
Query: 164 P---RFRMPMR 171
P R R+P+R
Sbjct: 363 PGAMRGRLPLR 373
>gi|332812270|ref|XP_514284.3| PREDICTED: RNA-binding protein 34 isoform 2 [Pan troglodytes]
gi|410225796|gb|JAA10117.1| RNA binding motif protein 34 [Pan troglodytes]
gi|410267564|gb|JAA21748.1| RNA binding motif protein 34 [Pan troglodytes]
gi|410289770|gb|JAA23485.1| RNA binding motif protein 34 [Pan troglodytes]
Length = 430
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 78/152 (51%), Gaps = 15/152 (9%)
Query: 5 LKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEV 64
KE AL++ A++ + + D A+ SS D RSVFVGN+ Y V
Sbjct: 250 FKEESAATQALKRNGAQIADGFRIRVDLASETSSR------DKRSVFVGNLPYKVEESAV 303
Query: 65 QQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKR 123
++HF CG++ V I DK G KG+ YV F +++V AL LN SEL GR+L+V ++
Sbjct: 304 EKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRV-MRS 362
Query: 124 TNVPGMKQH--RPR-----RPNPFMVYQSRGA 148
N +KQ PR +P + + SR A
Sbjct: 363 VNKEKLKQQNSNPRLKNVSKPKQGLNFTSRTA 394
>gi|125590709|gb|EAZ31059.1| hypothetical protein OsJ_15147 [Oryza sativa Japonica Group]
Length = 494
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 66/131 (50%), Gaps = 12/131 (9%)
Query: 45 VDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEA 104
DSR+VF+ NV ++ T + + +HF G V + I TD GQP G AY+EFL E+ ++A
Sbjct: 316 TDSRTVFLSNVHFAATKDALSRHFNKFGAVLKTLIVTDIAGQPTGSAYIEFLHKESAEQA 375
Query: 105 LHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLY-SPYGYGKI 163
L L+ + R LKV K + + PR SRG+ P L + Y
Sbjct: 376 LTLDNTSFMSRMLKVVRKNSLEVSQQSGWPR--------GSRGSTFPSRLTRTAYPRPAF 427
Query: 164 P---RFRMPMR 171
P R R+P+R
Sbjct: 428 PGAMRGRLPLR 438
>gi|340054247|emb|CCC48543.1| putative RNA-binding protein [Trypanosoma vivax Y486]
Length = 213
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 67/128 (52%), Gaps = 11/128 (8%)
Query: 5 LKEMEEEATALRQ-MHAKVGNEMAS---KQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
L+EM+ + L++ + K E A+ Q G S++ N S+FVG +D T
Sbjct: 23 LQEMQRQVNDLQEDLRLKTLQETAAHDEGQRKGTGSSTIKNT------SIFVGGLDPRTT 76
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
+++ F CG + R+T+ DKF GQ KG +Y+EF E AL N LHGR L V
Sbjct: 77 ESDLRVFFSGCGAIKRLTMLRDKFTGQLKGTSYIEFETVEQANIALVKNGQSLHGRPLVV 136
Query: 120 TVKRTNVP 127
VKR NVP
Sbjct: 137 AVKRDNVP 144
>gi|449463793|ref|XP_004149616.1| PREDICTED: uncharacterized protein LOC101209889 [Cucumis sativus]
Length = 706
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 66/125 (52%), Gaps = 5/125 (4%)
Query: 3 IRLKEMEEEATALRQMHAKVGNEMASKQDP--AAGGSSLANR--EEVDSRSVFVGNVDYS 58
+++ E E T + Q N Q P +A G R EE D+R++FV NV ++
Sbjct: 487 VQVMENGEPVTLVNQRKTPASNLQEEFQKPPLSANGQFAGTRPLEEADARTIFVSNVHFA 546
Query: 59 CTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQL 117
T + + +HF G V +V I TD GQPKG AYVEF++ E+ + AL L+ + R L
Sbjct: 547 ATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRIL 606
Query: 118 KVTVK 122
KV K
Sbjct: 607 KVVRK 611
>gi|146331996|gb|ABQ22504.1| RNA-binding protein 34-like protein [Callithrix jacchus]
Length = 220
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 70/129 (54%), Gaps = 8/129 (6%)
Query: 5 LKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEV 64
K+ AL++ A++ + + D A+ SS D RSVFVGN+ Y V
Sbjct: 41 FKDGSAATQALKRNGAQIADGFRIRVDLASATSSR------DKRSVFVGNLPYKVEESAV 94
Query: 65 QQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKR 123
++HF CG++ V I D+ G KG+ YV F +++V AL LN SEL GR+L+V ++
Sbjct: 95 EKHFLDCGSIMAVRIVRDQVTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRV-MRS 153
Query: 124 TNVPGMKQH 132
N +KQ+
Sbjct: 154 VNKEKLKQN 162
>gi|332236264|ref|XP_003267324.1| PREDICTED: RNA-binding protein 34 [Nomascus leucogenys]
Length = 430
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 71/137 (51%), Gaps = 10/137 (7%)
Query: 5 LKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEV 64
KE AL++ A++ + + D A SS D RSVFVGN+ Y V
Sbjct: 250 FKEESAATQALKRNGAQIADGFRIRVDLACETSSR------DKRSVFVGNLPYKVEESAV 303
Query: 65 QQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKR 123
++HF CG++ V I DK G KG+ YV F +++V AL LN SEL GR+L+V ++
Sbjct: 304 EKHFLDCGSILAVRIVRDKMTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRV-MRS 362
Query: 124 TNVPGMKQH--RPRRPN 138
N +KQ PR N
Sbjct: 363 VNKEKLKQQNSNPRLKN 379
>gi|119590411|gb|EAW70005.1| RNA binding motif protein 34, isoform CRA_a [Homo sapiens]
Length = 459
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 71/137 (51%), Gaps = 10/137 (7%)
Query: 5 LKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEV 64
KE AL++ A++ + + D A+ SS D RSVFVGN+ Y +
Sbjct: 279 FKEESAATQALKRNGAQIADGFRIRVDLASETSSR------DKRSVFVGNLPYKVEESAI 332
Query: 65 QQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKR 123
++HF CG++ V I DK G KG+ YV F +++V AL LN SEL GR+L+V ++
Sbjct: 333 EKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRV-MRS 391
Query: 124 TNVPGMKQH--RPRRPN 138
N KQ PR N
Sbjct: 392 VNKEKFKQQNSNPRLKN 408
>gi|72390421|ref|XP_845505.1| RNA-binding protein RBP14 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62360364|gb|AAX80780.1| RNA-binding protein RBP14, putative [Trypanosoma brucei]
gi|70802040|gb|AAZ11946.1| RNA-binding protein RBP14, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261328909|emb|CBH11887.1| RNA-binding protein RBP14, putative [Trypanosoma brucei gambiense
DAL972]
Length = 214
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 71/131 (54%), Gaps = 5/131 (3%)
Query: 2 KIRLKEMEEEATALRQ-MHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
++ L+EM+ + L++ + K E A++ + + + + SVFVG +D T
Sbjct: 20 ELELQEMQRQVNDLQEDLRLKTLQETAAQDEGQRKTTGVVASKNT---SVFVGGMDPRTT 76
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
+++ F +CGT+ R+T+ DKF GQ KG AY+EF E A+ N LHG+ L V
Sbjct: 77 ESDLRVFFSACGTIKRLTMLRDKFTGQQKGTAYIEFETVEQAAAAIVKNGQSLHGKPLTV 136
Query: 120 TVKRTNVPGMK 130
+KR N+P +
Sbjct: 137 AMKRDNIPAFQ 147
>gi|357514871|ref|XP_003627724.1| Polyadenylate-binding protein 2-A [Medicago truncatula]
gi|355521746|gb|AET02200.1| Polyadenylate-binding protein 2-A [Medicago truncatula]
Length = 815
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 70/137 (51%), Gaps = 10/137 (7%)
Query: 36 GSSLAN--REEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAY 92
GSS A+ ++ DSR++F NV ++ T + + +HF G V + I TD G+PKG AY
Sbjct: 624 GSSAASCPLDDADSRTIFASNVHFAATKDAICRHFNKFGEVLKAVIVTDSITGKPKGAAY 683
Query: 93 VEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPP 152
VEF+ EA AL L+ + R LKV K T + + P P P V RG+ P
Sbjct: 684 VEFMYKEAADNALSLDGTSFMSRILKVVRKST--AQQEDYAPAVPWPSGV---RGSPYPS 738
Query: 153 --FLYSPYGYGKIPRFR 167
FL +P G FR
Sbjct: 739 ARFLKAPIPAGTAGAFR 755
>gi|395728858|ref|XP_003775451.1| PREDICTED: AT-rich interactive domain-containing protein 4B [Pongo
abelii]
Length = 1815
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 73/139 (52%), Gaps = 10/139 (7%)
Query: 3 IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPE 62
+ KE AL++ A++ + + D A+ SS D RSVFVGN+ Y
Sbjct: 1633 VVFKEESAATQALKRNGAQIADGFRIRVDLASETSSR------DKRSVFVGNLPYKVEES 1686
Query: 63 EVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 121
V++HF CG++ V I DK G KG+ YV F +++V AL LN SEL GR+L+V +
Sbjct: 1687 AVEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRV-M 1745
Query: 122 KRTNVPGMKQH--RPRRPN 138
+ N +KQ PR N
Sbjct: 1746 RSVNKEKLKQQNSNPRLKN 1764
>gi|255711272|ref|XP_002551919.1| KLTH0B02992p [Lachancea thermotolerans]
gi|238933297|emb|CAR21481.1| KLTH0B02992p [Lachancea thermotolerans CBS 6340]
Length = 204
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 71/131 (54%), Gaps = 8/131 (6%)
Query: 8 MEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQH 67
+ EE + L+ + ++ P G S N + D+RSV+VGN+D S E +Q+
Sbjct: 33 ITEETSRLKDIEKRMAENAHGAGCP---GFSRFNDQSADARSVYVGNLDPSINAETLQEF 89
Query: 68 FQ-SCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTN 125
F+ S VNRV I+ +K G KG+A+VEF Q V +A+ L+ ++L G+ LK+ KR
Sbjct: 90 FKGSVSRVNRVEIQINKLTGFAKGFAFVEFAQPRDVMDAIKLSNTKLGGKPLKIVPKR-- 147
Query: 126 VPGMKQHRPRR 136
P Q P R
Sbjct: 148 -PSFHQESPNR 157
>gi|198426504|ref|XP_002123932.1| PREDICTED: similar to zinc finger CCCH-type containing 14 [Ciona
intestinalis]
Length = 842
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 15/164 (9%)
Query: 1 MKIRLKEMEEEATALRQMHA-------KVGNEMASKQDPAAGGSSLANREEVDSRSVFVG 53
M+ +L +M+EEA L+ + + + ++ P+A E D +S+ +
Sbjct: 656 MREKLLKMQEEAKKLKILQTEQLALLERTVSLKTAENKPSATA------ENSDEKSIHIA 709
Query: 54 NVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESEL 112
NV +S T +++ +HF CG V R TI D F G PKG+AY++F ++ +V AL + +
Sbjct: 710 NVHFSSTEKQLSEHFSICGKVVRATILKDAFTGHPKGFAYLQFEEASSVDMALAFDGTTF 769
Query: 113 HGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYS 156
R +KVT K++N K RP + YQ P LY+
Sbjct: 770 CSRAIKVT-KKSNEAIAKTAPAARPRYRVSYQYSAPRFPSRLYT 812
>gi|383872573|ref|NP_001244577.1| RNA-binding protein 34 [Macaca mulatta]
gi|380810788|gb|AFE77269.1| RNA-binding protein 34 isoform 1 [Macaca mulatta]
gi|383416755|gb|AFH31591.1| RNA-binding protein 34 isoform 1 [Macaca mulatta]
Length = 427
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 72/137 (52%), Gaps = 10/137 (7%)
Query: 5 LKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEV 64
KE AL++ A++ + + D A+ SS D RSVFVGN+ Y V
Sbjct: 250 FKEESAATQALKRNGAQIADGFRIRVDLASETSSR------DKRSVFVGNLPYKVAESAV 303
Query: 65 QQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKR 123
++HF CG+V V I D+ G KG+ YV F +++V AL LN SEL GR+L+V ++
Sbjct: 304 EKHFLDCGSVMAVRIVRDQVTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRV-MRS 362
Query: 124 TNVPGMKQH--RPRRPN 138
N +KQ PR N
Sbjct: 363 VNKEKLKQQNSNPRLKN 379
>gi|67605110|ref|XP_666661.1| cutinase negative acting protein [Cryptosporidium hominis TU502]
gi|54657695|gb|EAL36429.1| cutinase negative acting protein [Cryptosporidium hominis]
Length = 475
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 50/81 (61%), Gaps = 5/81 (6%)
Query: 41 NREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEA 100
N DSR V+ GN+ YSCT EE++ F+ CG++ RV++ +D KG A++ F Q E
Sbjct: 264 NTNNKDSREVYCGNLPYSCTEEEIRGLFEECGSIERVSVLSD-----KGCAFITFEQEEG 318
Query: 101 VQEALHLNESELHGRQLKVTV 121
+ A+ N++E GR L++ +
Sbjct: 319 AKSAIQWNQTEYKGRMLRINM 339
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTI-RTDKFGQPKGYAYVEFLQSEAVQEALHL 107
SV V N+ +S E ++ F CG V RV+I R G+ +G+A VEF E +Q AL L
Sbjct: 357 SVIVRNIPFSSDDESIKSFFNGCGVVKRVSIPRYSDTGKMRGFAMVEFENDEQIQNALKL 416
Query: 108 NESELHGRQLKVTV 121
+ + ++GR++ + +
Sbjct: 417 SGTSMNGREVTIEI 430
>gi|255544232|ref|XP_002513178.1| poly-A binding protein, putative [Ricinus communis]
gi|223547676|gb|EEF49169.1| poly-A binding protein, putative [Ricinus communis]
Length = 514
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 69/137 (50%), Gaps = 16/137 (11%)
Query: 43 EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAV 101
E+ DSR++FV NV ++ T + + +HF G V +V I D GQP G AY+EF++ EA
Sbjct: 334 EDADSRTIFVSNVHFAATKDSLSRHFNKFGDVLKVVIMADAATGQPMGSAYIEFMRKEAA 393
Query: 102 QEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYG 161
AL L+ + R LKV VKR+ P ++ M++ G P+ + G
Sbjct: 394 DNALSLDGTSFMSRILKV-VKRS--PANQEATAN-----MIWPRGGTRGSPYTAGRFSRG 445
Query: 162 KIPRF-------RMPMR 171
PR R+PM+
Sbjct: 446 PFPRGISGAFRPRLPMK 462
>gi|407416749|gb|EKF37788.1| RNA-binding protein, putative [Trypanosoma cruzi marinkellei]
Length = 212
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 68/132 (51%), Gaps = 19/132 (14%)
Query: 3 IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPE 62
+RLK ++E A A + H K +A+K + S+FVG +D T
Sbjct: 38 LRLKTLQETA-AQDEGHRKSTGSVATK-----------------NTSIFVGGMDPRTTEG 79
Query: 63 EVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 121
E++ F SCGT+ R+T+ DKF GQ KG AY+EF E + + LHG+ L V +
Sbjct: 80 ELRVFFSSCGTIKRLTMLRDKFTGQLKGNAYIEFEAPEQAAAGILKDGQSLHGKPLNVAM 139
Query: 122 KRTNVPGMKQHR 133
KR N+P ++ R
Sbjct: 140 KRDNIPAFQRGR 151
>gi|20809545|gb|AAH29451.1| RNA binding motif protein 34 [Homo sapiens]
gi|312151154|gb|ADQ32089.1| RNA binding motif protein 34 [synthetic construct]
Length = 425
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 63/116 (54%), Gaps = 7/116 (6%)
Query: 5 LKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEV 64
KE AL++ A++ + + D A+ SS D RSVFVGN+ Y +
Sbjct: 245 FKEESAATQALKRNGAQIADGFRIRVDLASETSSR------DKRSVFVGNLPYKVEESAI 298
Query: 65 QQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
++HF CG++ V I DK G KG+ YV F +++V AL LN SEL GR+L+V
Sbjct: 299 EKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRV 354
>gi|158258156|dbj|BAF85051.1| unnamed protein product [Homo sapiens]
Length = 425
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 63/116 (54%), Gaps = 7/116 (6%)
Query: 5 LKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEV 64
KE AL++ A++ + + D A+ SS D RSVFVGN+ Y +
Sbjct: 245 FKEESAATQALKRNGAQIADGFRIRVDLASETSSR------DKRSVFVGNLPYKVEESAI 298
Query: 65 QQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
++HF CG++ V I DK G KG+ YV F +++V AL LN SEL GR+L+V
Sbjct: 299 EKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRV 354
>gi|297829804|ref|XP_002882784.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328624|gb|EFH59043.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 664
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 43 EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAV 101
E+ SR++FV NV + T + + +HF CG V + TI TD GQP G AY+EF + EA
Sbjct: 501 EDASSRTIFVANVHFGATKDSLSRHFNKCGEVLKATIVTDPATGQPSGSAYIEFTRKEAA 560
Query: 102 QEALHLNESELHGRQLKVTVKRTN 125
+ AL L+ + R LK+ VK +N
Sbjct: 561 ENALSLDGTSFMSRILKI-VKGSN 583
>gi|238859597|ref|NP_055829.2| RNA-binding protein 34 isoform 1 [Homo sapiens]
gi|57013870|sp|P42696.2|RBM34_HUMAN RecName: Full=RNA-binding protein 34; AltName: Full=RNA-binding
motif protein 34
gi|119590412|gb|EAW70006.1| RNA binding motif protein 34, isoform CRA_b [Homo sapiens]
gi|306921633|dbj|BAJ17896.1| RNA binding motif protein 34 [synthetic construct]
Length = 430
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 63/116 (54%), Gaps = 7/116 (6%)
Query: 5 LKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEV 64
KE AL++ A++ + + D A+ SS D RSVFVGN+ Y +
Sbjct: 250 FKEESAATQALKRNGAQIADGFRIRVDLASETSSR------DKRSVFVGNLPYKVEESAI 303
Query: 65 QQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
++HF CG++ V I DK G KG+ YV F +++V AL LN SEL GR+L+V
Sbjct: 304 EKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRV 359
>gi|296230931|ref|XP_002760846.1| PREDICTED: RNA-binding protein 34 [Callithrix jacchus]
Length = 429
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 68/120 (56%), Gaps = 8/120 (6%)
Query: 14 ALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGT 73
AL++ A++ + + D A+ SS D RSVFVGN+ Y V++HF CG+
Sbjct: 259 ALKRNGAQIADGFRIRVDLASATSSR------DKRSVFVGNLPYKVEESAVEKHFLDCGS 312
Query: 74 VNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQH 132
+ V I D+ G KG+ YV F +++V AL LN SEL GR+L+V ++ N +KQ+
Sbjct: 313 IMAVRIVRDQVTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRV-MRSVNKEKLKQN 371
>gi|194042563|ref|XP_001925470.1| PREDICTED: RNA-binding protein 34 [Sus scrofa]
Length = 424
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 70/134 (52%), Gaps = 14/134 (10%)
Query: 5 LKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEV 64
K+ A AL + A++ + + D A+ SS D RSVFVGN+ Y V
Sbjct: 246 FKDESAAAKALERNGAQIADGFRIRVDLASETSSR------DKRSVFVGNLPYKVEESAV 299
Query: 65 QQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV---- 119
++HF CG+V V I D G +G+ YV F ++AV AL LN SEL GR+L+V
Sbjct: 300 EKHFLDCGSVVAVRIVRDPVTGVGRGFGYVLFENTDAVHLALKLNNSELMGRKLRVMRSI 359
Query: 120 ---TVKRTNVPGMK 130
+K+ + PG+K
Sbjct: 360 HKEKLKQNSNPGLK 373
>gi|301782455|ref|XP_002926642.1| PREDICTED: RNA-binding protein 34-like [Ailuropoda melanoleuca]
Length = 430
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 64/113 (56%), Gaps = 8/113 (7%)
Query: 9 EEEAT-ALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQH 67
E AT AL++ A++ + + D A+ SS D RSVFVGN+ Y V++H
Sbjct: 255 ESAATKALKRNGAQIADGFRIRVDLASDTSSR------DKRSVFVGNLPYKVEESAVEEH 308
Query: 68 FQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
F CG++ V I D+ G +G+ YV F ++AV AL LN SEL GR+L+V
Sbjct: 309 FLDCGSIVAVRIVRDRVTGVGRGFGYVLFENTDAVHLALKLNNSELMGRKLRV 361
>gi|440909353|gb|ELR59267.1| hypothetical protein M91_03724 [Bos grunniens mutus]
Length = 424
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGY 90
S+ + E D+RS++VGNVDY T EE++ HF CG+VNRVTI DKF G PKG+
Sbjct: 315 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGF 368
>gi|345309223|ref|XP_003428805.1| PREDICTED: polyadenylate-binding protein 2-like, partial
[Ornithorhynchus anatinus]
Length = 86
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKG 89
S+ + E D+RS++VGNVDY T EE++ HF CG+VNRVTI DKF G PKG
Sbjct: 34 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG 86
>gi|449501608|ref|XP_004161415.1| PREDICTED: uncharacterized protein LOC101228197 [Cucumis sativus]
Length = 709
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 65/126 (51%), Gaps = 5/126 (3%)
Query: 3 IRLKEMEEEATALRQMHAKVGNEMASKQDP--AAGGSSLANR--EEVDSRSVFVGNVDYS 58
+++ E E T + Q N Q P +A G R EE D+R++FV NV ++
Sbjct: 487 VQVMENGEPVTLVNQRKTPASNLQEEFQKPPLSANGQFAGTRPLEEADARTIFVSNVHFA 546
Query: 59 CTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQL 117
T + + +HF G V +V I TD GQPKG AYVEF++ E+ + AL L+ + R L
Sbjct: 547 ATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRIL 606
Query: 118 KVTVKR 123
K R
Sbjct: 607 KSIAGR 612
>gi|71408239|ref|XP_806536.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70870310|gb|EAN84685.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 231
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 5/131 (3%)
Query: 5 LKEMEEEATALRQ-MHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEE 63
L+EM+ + + L++ + K E A++ + + + S+FVG +D T E
Sbjct: 43 LQEMQRQVSDLQEDLRLKTLQETAAQDEGHRKSTGFVATKNT---SIFVGGLDPRTTEGE 99
Query: 64 VQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVK 122
++ F SCGT+ R+T+ DKF GQ KG AY+EF E + + LHG+ L V +K
Sbjct: 100 LRVFFSSCGTIKRLTMLRDKFTGQLKGNAYIEFEAPEQAAAGILKDGQSLHGKPLNVAMK 159
Query: 123 RTNVPGMKQHR 133
R N+P ++ R
Sbjct: 160 RDNIPAFQRGR 170
>gi|407851931|gb|EKG05622.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 231
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHL 107
S+FVG +D T E++ F SCGT+ R+T+ DKF GQ KG AY+EF E +
Sbjct: 85 SIFVGGLDPRTTEGELRVFFSSCGTIKRLTMLRDKFTGQLKGNAYIEFEAPEQAAAGILK 144
Query: 108 NESELHGRQLKVTVKRTNVPGMKQHR 133
+ LHG+ L V +KR N+P ++ R
Sbjct: 145 DGQSLHGKPLNVAMKRDNIPAFQRGR 170
>gi|431895672|gb|ELK05098.1| RNA-binding protein 34 [Pteropus alecto]
Length = 448
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 71/131 (54%), Gaps = 8/131 (6%)
Query: 3 IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPE 62
+ K+ A AL + A++ + + D A+ SS D RSVFVGN+ Y
Sbjct: 268 VVFKDENSAARALSRNGAQIADGFRIRVDLASETSSR------DKRSVFVGNLPYKAEEP 321
Query: 63 EVQQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 121
V++HF CG+V V I D + G +G+ +V F ++AV AL LN SEL GR+L+V +
Sbjct: 322 AVEEHFLDCGSVVAVRIVRDPRTGVGRGFGFVLFENTDAVHLALKLNNSELMGRKLRV-M 380
Query: 122 KRTNVPGMKQH 132
+ N +KQ+
Sbjct: 381 RSVNKEKLKQN 391
>gi|281341646|gb|EFB17230.1| hypothetical protein PANDA_016323 [Ailuropoda melanoleuca]
Length = 428
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 64/113 (56%), Gaps = 8/113 (7%)
Query: 9 EEEAT-ALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQH 67
E AT AL++ A++ + + D A+ SS D RSVFVGN+ Y V++H
Sbjct: 253 ESAATKALKRNGAQIADGFRIRVDLASDTSSR------DKRSVFVGNLPYKVEESAVEEH 306
Query: 68 FQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
F CG++ V I D+ G +G+ YV F ++AV AL LN SEL GR+L+V
Sbjct: 307 FLDCGSIVAVRIVRDRVTGVGRGFGYVLFENTDAVHLALKLNNSELMGRKLRV 359
>gi|402858632|ref|XP_003893797.1| PREDICTED: LOW QUALITY PROTEIN: AT-rich interactive domain-containing
protein 4B, partial [Papio anubis]
Length = 1816
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 73/139 (52%), Gaps = 10/139 (7%)
Query: 3 IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPE 62
+ KE AL++ A++ + + D A+ SS D RSVFVGN+ Y
Sbjct: 1635 VVFKEESAATQALKRNGAQIADGFRIRVDLASETSSR------DKRSVFVGNLPYKVAES 1688
Query: 63 EVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 121
V++HF CG+V V I D+ G KG+ YV F +++V AL LN SEL GR+L+V +
Sbjct: 1689 AVEKHFLDCGSVMAVRIVRDQVTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRV-M 1747
Query: 122 KRTNVPGMKQH--RPRRPN 138
+ N +KQ PR N
Sbjct: 1748 RSVNKEKLKQQNSNPRLKN 1766
>gi|296081813|emb|CBI20818.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 66/121 (54%), Gaps = 4/121 (3%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREE-VDSRSVFVGNVDYSC 59
+K+R ++E E LR H + + K D ++ +L + EE ++ R+V+V NV ++
Sbjct: 410 LKVRFHQLEREMCKLRSKHTDL--KRGGKPDLSSSSGTLRHPEEDIEPRTVYVTNVHFAA 467
Query: 60 TPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLK 118
T E + HF CG V V I TD+ QPK A++ F E+V +AL L+ + R +K
Sbjct: 468 TKEALSNHFAKCGLVVNVVILTDETIAQPKRSAFITFASVESVNKALALSGTSFFSRTVK 527
Query: 119 V 119
V
Sbjct: 528 V 528
>gi|395849832|ref|XP_003797517.1| PREDICTED: RNA-binding protein 34, partial [Otolemur garnettii]
Length = 406
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 11/115 (9%)
Query: 46 DSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEA 104
D RSVFVGN+ Y V++HF CG + V I D+ G KG+ YV F ++AV A
Sbjct: 265 DKRSVFVGNLPYKVEESVVEKHFLDCGNIVAVRIVRDQATGLGKGFGYVLFENTDAVHLA 324
Query: 105 LHLNESELHGRQLKV--------TVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIP 151
L LN SEL GR+L+V ++T+ PG+K R+P + + S+ A P
Sbjct: 325 LKLNNSELMGRKLRVMRCVNKEKLKQQTSNPGLKN--VRKPKQGLNFASKNAEGP 377
>gi|345798762|ref|XP_536341.3| PREDICTED: RNA-binding protein 34 [Canis lupus familiaris]
Length = 428
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 64/113 (56%), Gaps = 8/113 (7%)
Query: 9 EEEAT-ALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQH 67
E AT AL++ A++ + + D A+ SS D RSVFVGN+ Y V++H
Sbjct: 252 ESSATKALKRNGAQIADGFRIRVDLASETSSR------DKRSVFVGNLPYKVEESAVEEH 305
Query: 68 FQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
F CG++ V I D+ G +G+ YV F ++AV AL LN SEL GR+L+V
Sbjct: 306 FLDCGSIVAVRIVRDRVTGVGRGFGYVLFENTDAVHLALKLNNSELMGRKLRV 358
>gi|355715678|gb|AES05401.1| RNA binding motif protein 34 [Mustela putorius furo]
Length = 398
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 8/93 (8%)
Query: 46 DSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEA 104
D RSVFVGN+ Y V++HF CG++ V I D+ G +G+ YV F ++AV A
Sbjct: 255 DKRSVFVGNLPYKIEESAVEEHFLDCGSIVAVRIVRDRVTGVGRGFGYVLFENTDAVHLA 314
Query: 105 LHLNESELHGRQLKV-------TVKRTNVPGMK 130
L LN SEL GR+L+V +K + PG+K
Sbjct: 315 LKLNNSELMGRKLRVMRSVNKEKLKSNSNPGLK 347
>gi|71654126|ref|XP_815688.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70880762|gb|EAN93837.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 231
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHL 107
S+FVG +D T E++ F SCGT+ R+T+ DKF GQ KG AY+EF E +
Sbjct: 85 SIFVGGLDPRTTEGELRVFFSSCGTIKRLTMLRDKFTGQLKGNAYIEFEAPEQAAAGILK 144
Query: 108 NESELHGRQLKVTVKRTNVPGMKQHR 133
+ LHG+ L V +KR N+P ++ R
Sbjct: 145 DGQSLHGKPLNVAMKRDNIPAFQRGR 170
>gi|194206109|ref|XP_001915106.1| PREDICTED: RNA-binding protein 34 [Equus caballus]
Length = 428
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 71/131 (54%), Gaps = 8/131 (6%)
Query: 3 IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPE 62
+ K+ A AL++ A++ + + D A+ SS D RSVFVGN+ Y
Sbjct: 248 VVFKDDSAAAKALKRNGAQIADGFRIRVDLASETSSR------DKRSVFVGNLPYKVEES 301
Query: 63 EVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 121
V++HF CG + V I D+ G +G+ YV F ++AV AL LN SEL GR+L+V +
Sbjct: 302 AVEEHFLDCGHIVAVRIVRDQVTGVGRGFGYVLFENTDAVHLALKLNNSELMGRKLRV-M 360
Query: 122 KRTNVPGMKQH 132
+ N +KQ+
Sbjct: 361 RSVNKEKLKQN 371
>gi|167392444|ref|XP_001740157.1| RNA-binding protein SGN1 [Entamoeba dispar SAW760]
gi|165895835|gb|EDR23424.1| RNA-binding protein SGN1, putative [Entamoeba dispar SAW760]
Length = 135
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Query: 43 EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQ-PKGYAYVEFLQSEAV 101
+E+DSRS+ V NV+YS T ++++ F+ CG + V I + F Q P GYA +EF S A+
Sbjct: 34 KELDSRSIHVSNVEYSTTKDDLEDLFEKCGIILNVNIPINYFTQTPMGYANIEFKNSNAI 93
Query: 102 QEALHLNESELHGRQLKVTVKRT 124
++AL L+ + L+GR ++V+ K T
Sbjct: 94 EKALKLSGTYLNGRYIEVSKKIT 116
>gi|302823293|ref|XP_002993300.1| hypothetical protein SELMODRAFT_449095 [Selaginella moellendorffii]
gi|300138873|gb|EFJ05625.1| hypothetical protein SELMODRAFT_449095 [Selaginella moellendorffii]
Length = 773
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 83/167 (49%), Gaps = 30/167 (17%)
Query: 1 MKIRLKEMEEEATALRQMH---AKVGNEMASKQDPAA---------GGSSL--------- 39
MK R++++E E T LR AKV + ++ PAA +S+
Sbjct: 487 MKRRMRQVELEVTKLRTKQDEAAKVSEKSSAPHPPAATTNIPSVPAATTSMQTAPLTSFK 546
Query: 40 ---ANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEF 95
++ ++ DS+ + V NV ++ T E + HF SCG V +VT+ TD G+PKG AYVEF
Sbjct: 547 TPQSSSDDTDSKVILVTNVHFATTKEAISTHFGSCGEVVKVTMLTDGVSGKPKGSAYVEF 606
Query: 96 LQSEAVQEALHLNESELHGRQLKVTVKRTNV-----PGMKQHRPRRP 137
+A AL LNES L R ++V K NV P RPR P
Sbjct: 607 SSKDAADRALSLNESSLLSRPIRVARKDANVAETSSPAAAVMRPRPP 653
>gi|449278094|gb|EMC86061.1| RNA-binding protein 34, partial [Columba livia]
Length = 184
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 67/117 (57%), Gaps = 11/117 (9%)
Query: 8 MEEEATALRQMHAKVGNEMAS----KQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEE 63
+EE A++ ++ G E+A + D A+ SS N+ RSVF+GN+ Y + +
Sbjct: 66 FKEECDAIKALNEN-GTEIARGFHIRVDIASKTSSHDNK-----RSVFLGNLSYDISNDA 119
Query: 64 VQQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
V++HF CG V V I D K G KG+ YV F ++AV AL LN+S L GR+++V
Sbjct: 120 VREHFAVCGEVVAVRIVRDRKTGLGKGFGYVLFENTDAVHLALKLNDSVLLGRKIRV 176
>gi|224104037|ref|XP_002313291.1| predicted protein [Populus trichocarpa]
gi|222849699|gb|EEE87246.1| predicted protein [Populus trichocarpa]
Length = 762
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 56/106 (52%), Gaps = 4/106 (3%)
Query: 27 ASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFG 85
+S P G L E+ DSR++FV NV ++ T + + +HF G V +V I TD G
Sbjct: 528 SSASGPYTAGCPL---EDADSRTIFVSNVHFAATKDSLSRHFNKFGEVLKVVIVTDAATG 584
Query: 86 QPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQ 131
QP G AYVEF+ EA AL L+ + R LKV T + KQ
Sbjct: 585 QPTGSAYVEFMHKEAADNALSLDGTSFMSRILKVMNIETILSCYKQ 630
>gi|432843238|ref|XP_004065582.1| PREDICTED: RNA-binding protein 34-like [Oryzias latipes]
Length = 421
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 69/117 (58%), Gaps = 11/117 (9%)
Query: 8 MEEEATALRQMHAKVGNEMAS----KQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEE 63
+EEA A+R + + G E+ + + D A GSS ++ RSVFVGN+ + +
Sbjct: 226 FKEEAGAIRALESN-GMEVETNYNIRVDRATDGSSHDHK-----RSVFVGNLPFDIHEQA 279
Query: 64 VQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
++HF++CGTV V + DK G KG+ YV F +++VQ AL LN S+L GR ++V
Sbjct: 280 FRKHFETCGTVEAVRLVRDKDSGLGKGFGYVLFESADSVQLALELNASKLEGRSIRV 336
>gi|351694564|gb|EHA97482.1| RNA-binding protein 34 [Heterocephalus glaber]
Length = 428
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 62/116 (53%), Gaps = 7/116 (6%)
Query: 5 LKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEV 64
KE AL++ A++ + + D A+ SS D RSVF+GN+ Y V
Sbjct: 248 FKEESAATKALKRNGAQIADGFRIRVDLASETSSR------DKRSVFIGNLPYKVEETAV 301
Query: 65 QQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
++HF CG++ V I D G KG+ YV F ++AV AL LN SEL GR+L+V
Sbjct: 302 EEHFLDCGSIVAVRIVRDPVTGVGKGFGYVLFENTDAVHLALKLNNSELMGRKLRV 357
>gi|302772723|ref|XP_002969779.1| hypothetical protein SELMODRAFT_410730 [Selaginella moellendorffii]
gi|300162290|gb|EFJ28903.1| hypothetical protein SELMODRAFT_410730 [Selaginella moellendorffii]
Length = 771
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 83/167 (49%), Gaps = 30/167 (17%)
Query: 1 MKIRLKEMEEEATALRQMH---AKVGNEMASKQDPAA---------GGSSL--------- 39
MK R++++E E T LR AKV + ++ PAA +S+
Sbjct: 485 MKRRMRQVELEVTKLRTKQDEAAKVSEKSSAPHPPAATTNIPSVPAATTSMQTAPLTSFK 544
Query: 40 ---ANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEF 95
++ ++ DS+ + V NV ++ T E + HF SCG V +VT+ TD G+PKG AYVEF
Sbjct: 545 TPQSSSDDTDSKVILVTNVHFATTKEAISTHFGSCGEVVKVTMLTDGVSGKPKGSAYVEF 604
Query: 96 LQSEAVQEALHLNESELHGRQLKVTVKRTNV-----PGMKQHRPRRP 137
+A AL LNES L R ++V K NV P RPR P
Sbjct: 605 SSKDAADRALSLNESSLLSRPIRVARKDANVAETSSPAAAVMRPRPP 651
>gi|326520627|dbj|BAK07572.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 502
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 65/118 (55%), Gaps = 5/118 (4%)
Query: 27 ASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFG 85
A+K GGS+ DSR+VFV NV + T + + HF G V + I +D G
Sbjct: 303 ATKASSVVGGSTGQPESAPDSRTVFVSNVHFGATKDGLSCHFNKFGAVLKTLIVSDGATG 362
Query: 86 QPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQ---HRPRRPNPF 140
QP G AY+EFL+ E+ ++AL LN + R LKV V++++V +Q R R +PF
Sbjct: 363 QPTGSAYIEFLEKESAEKALTLNGTSFMSRILKV-VRKSSVEVPQQPAWSRGVRASPF 419
>gi|344278331|ref|XP_003410948.1| PREDICTED: RNA-binding protein 34 [Loxodonta africana]
Length = 433
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Query: 46 DSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEA 104
D RSVFVGN+ Y V++HF CG+V V I D+ G KG+ YV F ++AV A
Sbjct: 288 DKRSVFVGNLPYKIEESMVEKHFLDCGSVVAVRIVRDQVTGVGKGFGYVLFENTDAVHLA 347
Query: 105 LHLNESELHGRQLKVTVKRTNVPGMKQH 132
L LN SEL GR+L+V ++ N +KQ
Sbjct: 348 LKLNNSELMGRKLRV-MRSVNKEKLKQQ 374
>gi|426334252|ref|XP_004028672.1| PREDICTED: AT-rich interactive domain-containing protein 4B [Gorilla
gorilla gorilla]
Length = 1500
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 72/139 (51%), Gaps = 10/139 (7%)
Query: 3 IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPE 62
+ KE AL++ A + + + D A+ SS D RSVFVGN+ Y
Sbjct: 1318 VVFKEESAAMQALKRNGAHIADGFRIRVDRASETSSR------DKRSVFVGNLPYKVEES 1371
Query: 63 EVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 121
+++HF CG++ V I DK G KG+ YV F +++V AL LN SEL GR+L+V +
Sbjct: 1372 AIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRV-M 1430
Query: 122 KRTNVPGMKQH--RPRRPN 138
+ N +KQ PR N
Sbjct: 1431 RSVNKEKLKQQNSNPRLKN 1449
>gi|363731894|ref|XP_423974.3| PREDICTED: RNA-binding protein 34 [Gallus gallus]
Length = 405
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 63/116 (54%), Gaps = 6/116 (5%)
Query: 5 LKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEV 64
KE + AL++ +V + + D A+ S N+ RSVF+GN+ Y + V
Sbjct: 227 FKEERDAVKALKKNGTEVASGFHIRVDSASKNSLHDNK-----RSVFLGNLAYDISDSAV 281
Query: 65 QQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
++HF CG V V I D+ G KG+ YV F ++AV AL LN S+L GR+L+V
Sbjct: 282 REHFADCGDVVAVRIVRDRQSGMGKGFGYVLFENTDAVHLALKLNNSDLMGRKLRV 337
>gi|403342322|gb|EJY70479.1| hypothetical protein OXYTRI_08772 [Oxytricha trifallax]
Length = 471
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 57/95 (60%)
Query: 27 ASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQ 86
A K++ G + +E+ S +VF+GN+ YS + +++ + CG + V I + G+
Sbjct: 265 AEKREKKTGDENGEKKEQTKSSTVFIGNLSYSTNEQNIRKLLKDCGEIKGVRIALGEDGK 324
Query: 87 PKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 121
KG+A+VEF +E+ ++A+ N ++L GR +KV +
Sbjct: 325 MKGFAHVEFEDAESAEKAMKFNGADLDGRNIKVDI 359
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTI-RTDKFGQPKGYAYVEF-LQSEAVQEA 104
S +FVGN+ ++ E ++ F++ GT+ V+I + K + KGYA+++F ++EA +
Sbjct: 185 STEIFVGNIPFTTDAETLKAKFEAIGTIVNVSIPMSGK--RMKGYAFIKFSTRAEAEKAV 242
Query: 105 LHLNESELHGRQLKV 119
LN+ + GRQLKV
Sbjct: 243 KKLNDFDFDGRQLKV 257
>gi|308479279|ref|XP_003101849.1| hypothetical protein CRE_12119 [Caenorhabditis remanei]
gi|308262759|gb|EFP06712.1| hypothetical protein CRE_12119 [Caenorhabditis remanei]
Length = 169
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 65/110 (59%), Gaps = 6/110 (5%)
Query: 7 EMEEEATALRQMHAKVGNEMAS-KQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQ 65
E+E EA L+++ K+ +M + K P + ++ +D++S+FV NV++ T EE++
Sbjct: 18 ELEAEAKVLKEIQTKMFEKMDTGKMTPP----TEEEQKAIDAKSIFVSNVEFGATIEELK 73
Query: 66 QHFQSCGTVNRVTIRTDKFGQP-KGYAYVEFLQSEAVQEALHLNESELHG 114
QHF+ CG + R TI DK + K YA++EF + +V+ A +N S G
Sbjct: 74 QHFKGCGEIVRTTIPKDKHTKKQKNYAFIEFDSASSVENAAVMNGSTFRG 123
>gi|326915530|ref|XP_003204069.1| PREDICTED: RNA-binding protein 34-like [Meleagris gallopavo]
Length = 475
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 66/117 (56%), Gaps = 11/117 (9%)
Query: 8 MEEEATALRQMHAKVGNEMAS----KQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEE 63
+EE A++ + K G E+AS + D A+ S N+ RSVF+GN+ Y +
Sbjct: 219 FKEEHAAVKALK-KNGTEVASGFHIRVDSASKNSLHDNK-----RSVFLGNLAYDISDSA 272
Query: 64 VQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
V++HF CG V V I D+ G KG+ YV F ++AV AL LN S+L GR+L+V
Sbjct: 273 VREHFADCGDVVAVRIVRDRQSGMGKGFGYVLFENTDAVHLALKLNNSDLMGRKLRV 329
>gi|224059648|ref|XP_002299951.1| predicted protein [Populus trichocarpa]
gi|222847209|gb|EEE84756.1| predicted protein [Populus trichocarpa]
Length = 678
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 79/153 (51%), Gaps = 22/153 (14%)
Query: 29 KQDPAAGGSSLANR--EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFG 85
+Q+P SS + R E+ DSR++FV NV ++ T + + +HF G V +V + TD G
Sbjct: 484 QQEPQKPPSSASGRPLEDADSRTIFVSNVHFAATKDSLSRHFNKFGEVLKVVLVTDAATG 543
Query: 86 QPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQ- 144
QP G AYVEF++ EA AL L+ + R +KV +KR++ + +P M +
Sbjct: 544 QPTGSAYVEFMRKEAADNALSLDGTSFMSRIVKV-MKRSS-------SNQEASPVMTWPR 595
Query: 145 -SRGAIIPPFLYSPYGYGKIPRFRMPMRYSPYY 176
SRG S Y G+ R P R +P +
Sbjct: 596 ISRG--------SSYAAGRFARTPFP-RGTPIF 619
>gi|156840954|ref|XP_001643854.1| hypothetical protein Kpol_499p24 [Vanderwaltozyma polyspora DSM
70294]
gi|156114481|gb|EDO15996.1| hypothetical protein Kpol_499p24 [Vanderwaltozyma polyspora DSM
70294]
Length = 119
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 40 ANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK--FGQPKGYAYVEFLQ 97
+ R++ D +S+FV N+ TPE + + F++CG + R+TI DK G+AYVEF
Sbjct: 15 SKRKDSDQKSIFVSNISLEITPEVIDELFRNCGDIQRITILYDKNTHSNKGGHAYVEFDS 74
Query: 98 SEAVQEALHLNESELHGRQLKVTVKRTNVP 127
+ + AL LN GR+L + KRTN+P
Sbjct: 75 VRSKENALELNGIIHEGRKLIIRPKRTNIP 104
>gi|67469403|ref|XP_650680.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56467330|gb|EAL45294.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|449708457|gb|EMD47913.1| RNA recognition domain containing protein [Entamoeba histolytica
KU27]
Length = 135
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
Query: 44 EVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPK-GYAYVEFLQSEAVQ 102
E++SRSV V NV+Y+ T EE++ F+ CG V +V I ++F Q GYA +EF S AV+
Sbjct: 35 ELNSRSVHVSNVEYTTTKEELEDLFERCGVVLKVNIPINQFTQTTMGYANIEFKNSNAVE 94
Query: 103 EALHLNESELHGRQLKVTVKRT 124
+A+ L + L+GR ++V+ K T
Sbjct: 95 KAIKLTGTNLNGRYIEVSKKIT 116
>gi|334322146|ref|XP_001378610.2| PREDICTED: RNA-binding protein 34-like [Monodelphis domestica]
Length = 510
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALH 106
RSVFVGN+ Y +Q+HF CG+V V I +K G KG YV F ++AVQ AL
Sbjct: 275 RSVFVGNLPYKIEEAAIQEHFSDCGSVLAVKIVRNKVTGVGKGCGYVLFENTDAVQLALR 334
Query: 107 LNESELHGRQLKV 119
LN SEL GR+L+V
Sbjct: 335 LNNSELMGRKLRV 347
>gi|403216662|emb|CCK71158.1| hypothetical protein KNAG_0G01000 [Kazachstania naganishii CBS
8797]
Length = 131
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
Query: 33 AAGGSSLA-NREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPK-GY 90
A SLA R E D+RS+FV + PE ++ HF++CG ++R+T+ + K + GY
Sbjct: 25 TANNQSLAIQRAEADTRSIFVRGLSPETGPEVIEDHFKACGPISRITLFSQKRKRNTIGY 84
Query: 91 AYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNV 126
AY+EF + AL LN S L+G + V KRTNV
Sbjct: 85 AYIEFEAVQGRANALDLNNSILNGYSITVKKKRTNV 120
>gi|407041600|gb|EKE40843.1| RNA recognition motif domain containing protein [Entamoeba nuttalli
P19]
Length = 135
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query: 44 EVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPK-GYAYVEFLQSEAVQ 102
E+DSRSV V NV+Y+ T EE++ F+ CG V +V I ++ Q GYA +EF S AV+
Sbjct: 35 ELDSRSVHVSNVEYTTTKEELEDLFERCGVVLKVNIPINQLTQKTMGYANIEFKNSNAVE 94
Query: 103 EALHLNESELHGRQLKVTVKRT 124
+A+ L + L+GR ++V+ K T
Sbjct: 95 KAIKLTGTNLNGRYIEVSKKIT 116
>gi|426255548|ref|XP_004021410.1| PREDICTED: RNA-binding protein 34 [Ovis aries]
Length = 427
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 46 DSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEA 104
D RSVFVGN+ Y V++HF +CG V V I D+ G +G+ YV F ++AV A
Sbjct: 284 DKRSVFVGNLPYKVEESAVEKHFLACGNVVAVRIVRDQVTGVGRGFGYVLFENTDAVHLA 343
Query: 105 LHLNESELHGRQLKV 119
L LN SEL GR+L+V
Sbjct: 344 LKLNNSELMGRKLRV 358
>gi|440901028|gb|ELR52037.1| RNA-binding protein 34 [Bos grunniens mutus]
Length = 428
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 46 DSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEA 104
D RSVFVGN+ Y V++HF +CG V V I D+ G +G+ YV F ++AV A
Sbjct: 285 DKRSVFVGNLPYKVEESAVEKHFLACGNVVAVRIVRDQVTGVGRGFGYVLFENTDAVHLA 344
Query: 105 LHLNESELHGRQLKV 119
L LN SEL GR+L+V
Sbjct: 345 LKLNNSELMGRKLRV 359
>gi|417410496|gb|JAA51720.1| Putative splicing factor, partial [Desmodus rotundus]
Length = 412
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Query: 3 IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPE 62
+ K+ AL + A++ + + D A+ SS D RSVFVGN+ Y
Sbjct: 232 VVFKDERAATKALNRNGAQIADGFRVRVDLASETSSR------DKRSVFVGNLPYKVGES 285
Query: 63 EVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 121
V+ HF CG + V I D G +G+ YV F ++AV AL LN SEL GR+L+V +
Sbjct: 286 AVEHHFLDCGNIVAVRIVRDPLTGVGRGFGYVLFENTDAVHLALKLNNSELMGRKLRV-M 344
Query: 122 KRTNVPGMKQH 132
+ N +KQ+
Sbjct: 345 RSVNKEKLKQN 355
>gi|62078761|ref|NP_001014037.1| RNA-binding protein 34 [Rattus norvegicus]
gi|76363312|sp|Q5M9F1.1|RBM34_RAT RecName: Full=RNA-binding protein 34; AltName: Full=RNA-binding
motif protein 34
gi|56541178|gb|AAH87155.1| RNA binding motif protein 34 [Rattus norvegicus]
gi|149043245|gb|EDL96777.1| RNA binding motif protein 34 [Rattus norvegicus]
Length = 428
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 69/129 (53%), Gaps = 8/129 (6%)
Query: 5 LKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEV 64
KE A AL++ A++ + D A S A+R D RSVFVGN+ Y +
Sbjct: 248 FKEERAAAKALQRNGAQIAEGFRIRVDLA---SETASR---DKRSVFVGNLPYRVDESAL 301
Query: 65 QQHFQSCGTVNRVTI-RTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKR 123
++HF CG++ V I R G +G+ YV F ++AV AL LN SEL GR+L+V ++
Sbjct: 302 EEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLALKLNNSELMGRKLRV-MRS 360
Query: 124 TNVPGMKQH 132
N +KQ
Sbjct: 361 VNKEKLKQQ 369
>gi|242082291|ref|XP_002445914.1| hypothetical protein SORBIDRAFT_07g027950 [Sorghum bicolor]
gi|241942264|gb|EES15409.1| hypothetical protein SORBIDRAFT_07g027950 [Sorghum bicolor]
Length = 694
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 68/125 (54%), Gaps = 8/125 (6%)
Query: 8 MEEEATALRQMHAKVGNEMASKQDPAAGGS-----SLAN-REEVDSRSVFVGNVDYSCTP 61
M AT L +VG+ A K + S S A+ E+ DSR+++V NV ++ T
Sbjct: 489 MNSNATTLATNAKEVGHAEAQKDSQRSAPSVPVSYSTAHPTEDADSRTLYVSNVHFAATK 548
Query: 62 EEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
+ + +HF G V +V I T+ GQP G AYVEFL E+ + AL LN + R LKV
Sbjct: 549 DSLSRHFNKFGAVLKVVIVTNAATGQPTGSAYVEFLHKESAERALSLNGTSFMTRILKV- 607
Query: 121 VKRTN 125
V+R++
Sbjct: 608 VRRSS 612
>gi|388627|gb|AAA28862.1| putative, partial [Drosophila melanogaster]
Length = 48
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/48 (60%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEF 95
SV+VGNVDY + EE++ HF CGT+NRVTI +K G PKG+AY+EF
Sbjct: 1 SVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEF 48
>gi|145495181|ref|XP_001433584.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400702|emb|CAK66187.1| unnamed protein product [Paramecium tetraurelia]
Length = 156
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
Query: 43 EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQ 102
+++D S+FV N+D + T ++++++F+ CGT+ +VT+R+DK Y+YV+F + +V+
Sbjct: 35 KDIDLSSIFVRNLDENTTEDDLKEYFKDCGTIVKVTLRSDK-NTGTLYSYVQFQEQGSVE 93
Query: 103 EALHLNESELHGRQLKVTVKRTNV 126
+AL L+E + G+++ V KRTN+
Sbjct: 94 DALVLSEGIIRGKKILVFQKRTNL 117
>gi|76363311|sp|Q8C5L7.1|RBM34_MOUSE RecName: Full=RNA-binding protein 34; AltName: Full=RNA-binding
motif protein 34
gi|26346951|dbj|BAC37124.1| unnamed protein product [Mus musculus]
Length = 375
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 3 IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPE 62
+ K+ A AL++ A++ + D A S A+R D RSVFVGN+ Y
Sbjct: 252 VVFKDESAAAKALQRNGAQIAEGFRIRVDLA---SETASR---DKRSVFVGNLPYKIEDS 305
Query: 63 EVQQHFQSCGTVNRVTI-RTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 121
+++HF CG++ V I R G +G+ YV F ++AV AL LN SEL GR+L+V +
Sbjct: 306 ALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLALKLNNSELMGRKLRV-M 364
Query: 122 KRTNVPGMKQH 132
+ N +KQ
Sbjct: 365 RSVNKEKLKQQ 375
>gi|395531593|ref|XP_003767862.1| PREDICTED: RNA-binding protein 34 [Sarcophilus harrisii]
Length = 438
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALH 106
RSVFVGN+ Y +Q+HF CG+V V + +K G KG YV F ++AVQ AL
Sbjct: 294 RSVFVGNLPYKIEETAIQEHFSDCGSVLAVKLVRNKVTGIGKGCGYVLFENTDAVQLALK 353
Query: 107 LNESELHGRQLKVTVKRTNVPGMKQHRP 134
LN SEL GR+L+V N H P
Sbjct: 354 LNNSELMGRKLRVKRYVNNEKAKLSHTP 381
>gi|42794007|ref|NP_766350.2| RNA-binding protein 34 [Mus musculus]
gi|148679875|gb|EDL11822.1| RNA binding motif protein 34, isoform CRA_a [Mus musculus]
gi|187954471|gb|AAI41279.1| RNA binding motif protein 34 [Mus musculus]
Length = 442
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 3 IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPE 62
+ K+ A AL++ A++ + D A S A+R D RSVFVGN+ Y
Sbjct: 252 VVFKDESAAAKALQRNGAQIAEGFRIRVDLA---SETASR---DKRSVFVGNLPYKIEDS 305
Query: 63 EVQQHFQSCGTVNRVTI-RTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 121
+++HF CG++ V I R G +G+ YV F ++AV AL LN SEL GR+L+V +
Sbjct: 306 ALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLALKLNNSELMGRKLRV-M 364
Query: 122 KRTNVPGMKQH 132
+ N +KQ
Sbjct: 365 RSVNKEKLKQQ 375
>gi|354468817|ref|XP_003496847.1| PREDICTED: RNA-binding protein 34-like [Cricetulus griseus]
Length = 425
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Query: 46 DSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTI-RTDKFGQPKGYAYVEFLQSEAVQEA 104
D RSVFVGN+ Y +++HF CG++ V I R + G +G+ YV F ++AV A
Sbjct: 283 DKRSVFVGNLPYKVEEAALEEHFLDCGSIVAVRILRNPQTGVGRGFGYVLFENTDAVHLA 342
Query: 105 LHLNESELHGRQLKVTVKRTNVPGMKQH 132
L LN SEL GR+L+V ++ N +KQ
Sbjct: 343 LKLNNSELMGRKLRV-MRSVNKEKLKQQ 369
>gi|413925276|gb|AFW65208.1| hypothetical protein ZEAMMB73_925630 [Zea mays]
Length = 695
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
Query: 43 EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAV 101
E+ DSR+++V NV ++ T + + +HF G V +V I T+ GQP G AYVEFL E+
Sbjct: 531 EDADSRTLYVNNVHFAATKDSLSRHFNKFGAVLKVVIVTNAATGQPTGSAYVEFLHKESA 590
Query: 102 QEALHLNESELHGRQLKVTVKRTN 125
+ AL LN + R LKV V+R++
Sbjct: 591 ERALSLNGTSFMTRILKV-VRRSS 613
>gi|159476702|ref|XP_001696450.1| hypothetical protein CHLREDRAFT_51996 [Chlamydomonas reinhardtii]
gi|158282675|gb|EDP08427.1| predicted protein [Chlamydomonas reinhardtii]
Length = 91
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHL 107
+VFVGN+ +S + +++++HF+ CG + V I D G+ KGYA+V+F ++ Q+A
Sbjct: 2 TVFVGNLSWSASEDDIKKHFKDCGKIVSVRIGMDAATGRSKGYAHVDFESADQAQKATSK 61
Query: 108 NESELHGRQLKVTVKRTNVP 127
SEL GR +KV V + P
Sbjct: 62 AGSELGGRNIKVEVAQARAP 81
>gi|148679876|gb|EDL11823.1| RNA binding motif protein 34, isoform CRA_b [Mus musculus]
Length = 432
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 3 IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPE 62
+ K+ A AL++ A++ + D A S A+R D RSVFVGN+ Y
Sbjct: 242 VVFKDESAAAKALQRNGAQIAEGFRIRVDLA---SETASR---DKRSVFVGNLPYKIEDS 295
Query: 63 EVQQHFQSCGTVNRVTI-RTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 121
+++HF CG++ V I R G +G+ YV F ++AV AL LN SEL GR+L+V +
Sbjct: 296 ALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLALKLNNSELMGRKLRV-M 354
Query: 122 KRTNVPGMKQH 132
+ N +KQ
Sbjct: 355 RSVNKEKLKQQ 365
>gi|256085557|ref|XP_002578985.1| hypothetical protein [Schistosoma mansoni]
gi|353233139|emb|CCD80494.1| hypothetical protein Smp_078240 [Schistosoma mansoni]
Length = 949
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 53/89 (59%)
Query: 20 AKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTI 79
A V + SK +P + G+ + + + +VFV N+DYS + E++Q F+ CG V V +
Sbjct: 623 ATVKSAKVSKPNPTSHGTFVPHDPSKNEFTVFVSNLDYSVSEEQIQHTFEKCGNVTSVRL 682
Query: 80 RTDKFGQPKGYAYVEFLQSEAVQEALHLN 108
D G+ KG+AYVEF E+V+ AL L+
Sbjct: 683 VRDYAGRSKGFAYVEFENKESVKTALTLD 711
Score = 43.1 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 46 DSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEAL 105
+ +FV N+D + E+++ F+ G + V + T + G PKG+AY+EF ++ +AL
Sbjct: 774 EPEKLFVRNLDKTVKNEDLEMLFKQYGNIVSVRLATYRNGVPKGHAYIEFTNADDASKAL 833
Query: 106 -HLNESELHGRQLKVTVKRTNVPG 128
N E + L V++ V G
Sbjct: 834 VATNGLEFRNKILSVSISEPPVRG 857
>gi|440803738|gb|ELR24621.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 411
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFG-QPKGYAYVEFLQSEAVQEAL 105
+R+ FVGN+ +S EE++ HF+S GTV RV I D KG+ +VEF + + AL
Sbjct: 248 ARAAFVGNLPFSIRDEELRSHFESAGTVKRVRIVRDSATFMGKGFGFVEFENKDDLLGAL 307
Query: 106 HLNESELHGRQLKV 119
L+ESEL GRQ++V
Sbjct: 308 SLHESELQGRQIRV 321
>gi|291402150|ref|XP_002717371.1| PREDICTED: poly(A) binding protein, nuclear 1-like [Oryctolagus
cuniculus]
Length = 430
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 46 DSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEA 104
D RSVFVGN+ Y V++HF CG + V I D+ G KG+ YV F ++V A
Sbjct: 284 DKRSVFVGNLPYKVEETAVEEHFLDCGNIVAVRIVRDQITGIGKGFGYVLFENKDSVHLA 343
Query: 105 LHLNESELHGRQLKV 119
L LN SEL GR+L+V
Sbjct: 344 LKLNNSELMGRKLRV 358
>gi|115477168|ref|NP_001062180.1| Os08g0504600 [Oryza sativa Japonica Group]
gi|42407676|dbj|BAD08825.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|113624149|dbj|BAF24094.1| Os08g0504600 [Oryza sativa Japonica Group]
Length = 684
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Query: 43 EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAV 101
E+ DSR+++V NV + T + + +HF G V +V I T+ GQP G AYVEFL E+
Sbjct: 523 EDADSRTLYVSNVHFGATKDALSRHFNKFGAVLKVVIVTNAATGQPTGSAYVEFLHKESA 582
Query: 102 QEALHLNESELHGRQLKVTVKRTN 125
+ AL LN + R LKV V+R++
Sbjct: 583 ERALSLNGTSFMARILKV-VRRSS 605
>gi|218201413|gb|EEC83840.1| hypothetical protein OsI_29794 [Oryza sativa Indica Group]
gi|222640831|gb|EEE68963.1| hypothetical protein OsJ_27861 [Oryza sativa Japonica Group]
Length = 725
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Query: 43 EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAV 101
E+ DSR+++V NV + T + + +HF G V +V I T+ GQP G AYVEFL E+
Sbjct: 564 EDADSRTLYVSNVHFGATKDALSRHFNKFGAVLKVVIVTNAATGQPTGSAYVEFLHKESA 623
Query: 102 QEALHLNESELHGRQLKVTVKRTN 125
+ AL LN + R LKV V+R++
Sbjct: 624 ERALSLNGTSFMARILKV-VRRSS 646
>gi|410975075|ref|XP_003993961.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 34 [Felis
catus]
Length = 433
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 46 DSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEA 104
D RSVFVGN+ Y +++HF CG++ V I D G +G+ YV F ++AV A
Sbjct: 290 DKRSVFVGNLPYKVEESAIEEHFLDCGSIVAVRIVRDPATGVGRGFGYVLFENTDAVHLA 349
Query: 105 LHLNESELHGRQLKV 119
L LN SEL GR+L+V
Sbjct: 350 LKLNNSELMGRKLRV 364
>gi|327262180|ref|XP_003215903.1| PREDICTED: RNA-binding protein 34-like [Anolis carolinensis]
Length = 377
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 46 DSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTI-RTDKFGQPKGYAYVEFLQSEAVQEA 104
+ RSVFVGN+ Y+ + V+ HF CG V V I R + G KG+ YV F ++AV A
Sbjct: 234 NKRSVFVGNLPYAIDDDTVRTHFSQCGNVMGVRIVRDQRTGIGKGFGYVLFETTDAVHLA 293
Query: 105 LHLNESELHGRQLKV 119
L LN +EL GR+L+V
Sbjct: 294 LKLNNAELEGRKLRV 308
>gi|365989592|ref|XP_003671626.1| hypothetical protein NDAI_0H02090 [Naumovozyma dairenensis CBS 421]
gi|343770399|emb|CCD26383.1| hypothetical protein NDAI_0H02090 [Naumovozyma dairenensis CBS 421]
Length = 128
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 56/93 (60%), Gaps = 3/93 (3%)
Query: 40 ANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGT-VNRVTIRTDKFGQPKGYAYVEFLQS 98
A + + DSRS+FV N+ TPE+++ HF+ G + R+T+ TD+ KG AY+EF
Sbjct: 26 AEQLDADSRSIFVNNISIDMTPEQIESHFKEFGNHIVRITLFTDR--HSKGCAYIEFDNV 83
Query: 99 EAVQEALHLNESELHGRQLKVTVKRTNVPGMKQ 131
E + AL+ N + +G + V KRTN+P K+
Sbjct: 84 EVRELALNSNGTPFNGSVIGVFRKRTNLPKFKR 116
>gi|432106224|gb|ELK32110.1| AT-rich interactive domain-containing protein 4B [Myotis davidii]
Length = 1743
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Query: 46 DSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEA 104
D RSVFVGN+ Y V+ HF CG + V I D G +G+ YV F ++AV A
Sbjct: 1600 DKRSVFVGNLPYKIEDAVVEDHFLDCGNIVAVRIVRDPLTGVGRGFGYVLFENTDAVHLA 1659
Query: 105 LHLNESELHGRQLKVTVKRTNVPGMKQH 132
L LN SEL GR+L+V ++ N +KQ+
Sbjct: 1660 LKLNNSELMGRKLRV-MRSVNKDKLKQN 1686
>gi|452840079|gb|EME42017.1| hypothetical protein DOTSEDRAFT_72945 [Dothistroma septosporum
NZE10]
Length = 339
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 54/89 (60%), Gaps = 3/89 (3%)
Query: 39 LANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQ 97
+A RE+ R VF+GN+ Y + E + + F SCG V + DK GQPKG+ ++E+
Sbjct: 1 MATREK-GGRVVFIGNIPYGVSEEMIMEIFSSCGKVMNFRLVYDKETGQPKGFGFLEYSD 59
Query: 98 SEAVQEAL-HLNESELHGRQLKVTVKRTN 125
+++ Q A+ +LNE EL+GR L+V N
Sbjct: 60 TDSAQSAIRNLNEYELNGRTLRVDFSNDN 88
>gi|293332605|ref|NP_001170249.1| uncharacterized protein LOC100384205 [Zea mays]
gi|224034597|gb|ACN36374.1| unknown [Zea mays]
gi|413952638|gb|AFW85287.1| hypothetical protein ZEAMMB73_728520 [Zea mays]
Length = 127
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 41/55 (74%), Gaps = 5/55 (9%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNV 55
MK RLKEMEEEA ALR+M AKV +M QDP A S N+EE+DSRSVFVGNV
Sbjct: 37 MKRRLKEMEEEAAALREMQAKVAKDM---QDPNATTSE--NKEEMDSRSVFVGNV 86
>gi|145528476|ref|XP_001450032.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124417632|emb|CAK82635.1| unnamed protein product [Paramecium tetraurelia]
Length = 156
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 64/101 (63%), Gaps = 4/101 (3%)
Query: 29 KQDPAAGGSSLANR---EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFG 85
K+D + N+ +++D S+FV N+D + T ++++++F+ CG + +VT+R+DK
Sbjct: 18 KEDESQKKGGTDNKHQLKDIDLTSIFVRNLDENTTEDDLKEYFKDCGNIVKVTLRSDK-N 76
Query: 86 QPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNV 126
Y+Y++F +V++AL L+E + G+++ V KRTN+
Sbjct: 77 TGTLYSYIQFQDQSSVEDALVLSEGIIRGKKILVFQKRTNL 117
>gi|449681386|ref|XP_002157256.2| PREDICTED: RNA-binding protein 34-like [Hydra magnipapillata]
Length = 360
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
Query: 40 ANREEVDSR-SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQ 97
A+ ++VD + +FVGN+ +S + EE++ HF+ CG + + I DK G KG+ YV F
Sbjct: 195 ADFQKVDQKLCLFVGNLPFSLSDEELRSHFKDCGWIEDIRIIRDKATGLGKGFGYVRFKN 254
Query: 98 SEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRP 134
S+ V L L+ES+ GR+L+V R ++ +P
Sbjct: 255 SDGVMLGLKLHESDFKGRKLRVFRSRNENQEKRKSKP 291
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 18/91 (19%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRT----------------DKFGQPKGY 90
SR++FVGNV T +++++ F G + + IR+ KF + +
Sbjct: 102 SRTIFVGNVSLKVTRKDIKKLFAKFGNIETIRIRSVPVAESKLPKKVALLQKKFHKERDS 161
Query: 91 --AYVEFLQSEAVQEALHLNESELHGRQLKV 119
AYV F + + ++AL N L G L+V
Sbjct: 162 MNAYVVFKEKSSAEKALESNGYLLEGLHLRV 192
>gi|414869375|tpg|DAA47932.1| TPA: hypothetical protein ZEAMMB73_433523 [Zea mays]
Length = 694
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 44 EVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQ 102
+ DSR+++V NV ++ T + + +HF G V +V I T+ GQP G AYVEFL E+ +
Sbjct: 531 DADSRTLYVSNVHFAATKDSLSRHFNKFGAVLKVVIVTNAATGQPTGSAYVEFLHKESAE 590
Query: 103 EALHLNESELHGRQLKVTVKRTN 125
AL LN + R LKV V+R++
Sbjct: 591 RALSLNGTSFMTRILKV-VRRSS 612
>gi|194334049|ref|YP_002015909.1| RNP-1 like RNA-binding protein [Prosthecochloris aestuarii DSM 271]
gi|194311867|gb|ACF46262.1| RNP-1 like RNA-binding protein [Prosthecochloris aestuarii DSM 271]
Length = 90
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 56/98 (57%), Gaps = 12/98 (12%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALH- 106
++++GN+DY T E++++ F G V+ I TDKF G+ KG+ +VE S+ EA+
Sbjct: 2 NIYIGNLDYGVTEEDLREAFGEFGDVSSANIITDKFTGRSKGFGFVEMSSSDDANEAIES 61
Query: 107 LNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQ 144
LN+++L+GR +KV + +PR P YQ
Sbjct: 62 LNDTDLNGRTIKV----------NEAKPRAERPARRYQ 89
>gi|413952636|gb|AFW85285.1| hypothetical protein ZEAMMB73_728520 [Zea mays]
Length = 105
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 42/57 (73%), Gaps = 5/57 (8%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDY 57
MK RLKEMEEEA ALR+M AKV +M QDP A S N+EE+DSRSVFVGNV +
Sbjct: 37 MKRRLKEMEEEAAALREMQAKVAKDM---QDPNATTSE--NKEEMDSRSVFVGNVSF 88
>gi|357473893|ref|XP_003607231.1| 28 kDa ribonucleoprotein [Medicago truncatula]
gi|355508286|gb|AES89428.1| 28 kDa ribonucleoprotein [Medicago truncatula]
Length = 643
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 50/81 (61%)
Query: 43 EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQ 102
E S+++FVGN+ +S ++++ FQ CG V V +D+ G+ KG+ +VEF +EA Q
Sbjct: 379 ENSGSKTLFVGNLSFSVQRSDIEKFFQDCGEVVDVRFSSDEEGRFKGFGHVEFASAEAAQ 438
Query: 103 EALHLNESELHGRQLKVTVKR 123
AL +N EL R +++ + R
Sbjct: 439 SALEMNGQELLQRAVRLDLAR 459
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 49/79 (62%), Gaps = 6/79 (7%)
Query: 47 SRSVFVGNVDYSCTPEEVQ----QHFQ-SCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEA 100
S++VFV D + +E++ +HF +CG RV+I D + G KG+AY++F S++
Sbjct: 482 SQTVFVRGFDKNLGEDEIRAKLMEHFGGTCGEPTRVSIPKDFESGYSKGFAYMDFKDSDS 541
Query: 101 VQEALHLNESELHGRQLKV 119
+AL L+ESEL G QL V
Sbjct: 542 FSKALELHESELDGYQLSV 560
>gi|328769593|gb|EGF79636.1| hypothetical protein BATDEDRAFT_19718 [Batrachochytrium
dendrobatidis JAM81]
Length = 431
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Query: 43 EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAV 101
EE + +VFVGN+ ++ E + F CGTV I TDK G+ KG+ YV F ++A+
Sbjct: 178 EEPVNSTVFVGNLSWNVDEEMLAATFADCGTVESARIITDKETGRAKGFGYVTFESADAL 237
Query: 102 QEALHLNESELHGRQLKVTVKRTNVP--GMKQHRPRRP 137
A+ L +EL GR+++V V P G +Q R P
Sbjct: 238 TAAMALTGTELDGREIRVDVSTPKPPRDGNRQGRKEAP 275
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL 105
+ ++F+GN+ ++ T +E+++ F G + V TD+ G KG+ YVE+ E Q+A+
Sbjct: 280 TTTLFLGNLSFNVTEDEIRESFSQYGQLVSVRFPTDRDTGAFKGFGYVEYGDVETAQKAV 339
Query: 106 H-LNESELHGRQLKV 119
LN E+ GR L++
Sbjct: 340 EGLNGVEIAGRSLRL 354
>gi|326427350|gb|EGD72920.1| hypothetical protein PTSG_04652 [Salpingoeca sp. ATCC 50818]
Length = 976
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 46 DSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQS-EAVQEA 104
D R+VFV +D+SCT ++V+ F+ G V V + T G+P+G+AYVEF S +A
Sbjct: 781 DPRTVFVKRLDHSCTEQDVRTLFEQYGAVKEVRMVTTLAGKPRGFAYVEFEASRDAATAI 840
Query: 105 LHLNESELHGRQLKVTV 121
++L+++E GRQL+V +
Sbjct: 841 MNLDKAEFKGRQLQVAL 857
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%)
Query: 44 EVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQE 103
E R+VFV N+D++ + +Q F+ CG + + + GQ KG+AY+EF + ++
Sbjct: 686 EAAQRTVFVKNLDFAVDEDMLQMFFKDCGAIRDIRLVRKPSGQSKGFAYIEFEEKSSLAF 745
Query: 104 ALHLNESELHGRQLKV 119
AL + ++GR + V
Sbjct: 746 ALSKDRQFMNGRPVLV 761
>gi|357473909|ref|XP_003607239.1| RNA-binding protein [Medicago truncatula]
gi|355508294|gb|AES89436.1| RNA-binding protein [Medicago truncatula]
Length = 635
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 50/81 (61%)
Query: 43 EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQ 102
E S+++FVGN+ +S ++++ FQ CG V V +D+ G+ KG+ +VEF +EA Q
Sbjct: 371 ENSGSKTLFVGNLSFSVQRSDIEKFFQDCGEVVDVRFSSDEEGRFKGFGHVEFASAEAAQ 430
Query: 103 EALHLNESELHGRQLKVTVKR 123
AL +N EL R +++ + R
Sbjct: 431 SALEMNGQELLQRAVRLDLAR 451
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 49/79 (62%), Gaps = 6/79 (7%)
Query: 47 SRSVFVGNVDYSCTPEEVQ----QHFQ-SCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEA 100
S++VFV D + +E++ +HF +CG RV+I D + G KG+AY++F S++
Sbjct: 474 SQTVFVRGFDKNLGEDEIRAKLMEHFGGTCGEPTRVSIPKDFESGYSKGFAYMDFKDSDS 533
Query: 101 VQEALHLNESELHGRQLKV 119
+AL L+ESEL G QL V
Sbjct: 534 FSKALELHESELDGYQLSV 552
>gi|357473911|ref|XP_003607240.1| RNA-binding protein [Medicago truncatula]
gi|355508295|gb|AES89437.1| RNA-binding protein [Medicago truncatula]
Length = 623
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 50/81 (61%)
Query: 43 EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQ 102
E S+++FVGN+ +S ++++ FQ CG V V +D+ G+ KG+ +VEF +EA Q
Sbjct: 359 ENSGSKTLFVGNLSFSVQRSDIEKFFQDCGEVVDVRFSSDEEGRFKGFGHVEFASAEAAQ 418
Query: 103 EALHLNESELHGRQLKVTVKR 123
AL +N EL R +++ + R
Sbjct: 419 SALEMNGQELLQRAVRLDLAR 439
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 49/79 (62%), Gaps = 6/79 (7%)
Query: 47 SRSVFVGNVDYSCTPEEVQ----QHFQ-SCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEA 100
S++VFV D + +E++ +HF +CG RV+I D + G KG+AY++F S++
Sbjct: 462 SQTVFVRGFDKNLGEDEIRAKLMEHFGGTCGEPTRVSIPKDFESGYSKGFAYMDFKDSDS 521
Query: 101 VQEALHLNESELHGRQLKV 119
+AL L+ESEL G QL V
Sbjct: 522 FSKALELHESELDGYQLSV 540
>gi|413918641|gb|AFW58573.1| hypothetical protein ZEAMMB73_910026 [Zea mays]
Length = 199
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 27 ASKQDPAAGGSSLANREEV-DSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF- 84
A K AAG ++ E DSR+VFV NV + + + + +HF G V + I TD
Sbjct: 4 AQKASGAAGSNTTGQPEGGPDSRTVFVSNVHFGSSKDALSRHFNKFGAVLKTHIVTDGVT 63
Query: 85 GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVK 122
GQ G AY+EFL E+ ++AL LN + R LKV K
Sbjct: 64 GQSTGSAYIEFLHKESAEQALTLNGTSFMSRILKVVRK 101
>gi|940288|gb|AAA74208.1| protein localized in the nucleoli of pea nuclei; ORF; putative
[Pisum sativum]
Length = 611
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 106
S+++FVGN+ +S +++ FQ CG V V + +D+ G+ KG+ +VEF +EA Q AL
Sbjct: 354 SKTLFVGNLSFSVQRSDIESFFQECGEVVDVRLASDEDGRFKGFGHVEFATAEAAQSALE 413
Query: 107 LNESELHGRQLKVTVKR 123
LN EL R +++ + R
Sbjct: 414 LNGQELLQRGVRLDLAR 430
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 5/78 (6%)
Query: 47 SRSVFVGNVDYSCTPEEV----QQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAV 101
S++VFV D S +E+ +QHF SCG +RV+I D G KG+AY++F S++
Sbjct: 450 SQTVFVRGFDKSLGEDEIRAKLEQHFASCGQASRVSIPKDYDTGYSKGFAYMDFKDSDSF 509
Query: 102 QEALHLNESELHGRQLKV 119
+A+ L+ SEL G L +
Sbjct: 510 NKAIELHGSELDGYPLSI 527
>gi|308466761|ref|XP_003095632.1| hypothetical protein CRE_13667 [Caenorhabditis remanei]
gi|308244631|gb|EFO88583.1| hypothetical protein CRE_13667 [Caenorhabditis remanei]
Length = 160
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 11/95 (11%)
Query: 46 DSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTI-----------RTDKFGQPKGYAYVE 94
+ VFVGNVD+ T E++ HF+ CG + R+TI + + +A++E
Sbjct: 19 TATCVFVGNVDFGATVAELEAHFKGCGEIVRITIPKDKITKKQKKYVKEVKEILFHAFIE 78
Query: 95 FLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGM 129
F + +V A+ +N S RQ+ VT+KRTN PGM
Sbjct: 79 FECAASVANAIVMNGSTFRERQIVVTLKRTNKPGM 113
>gi|449531099|ref|XP_004172525.1| PREDICTED: uncharacterized protein LOC101223830, partial [Cucumis
sativus]
Length = 500
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 5/78 (6%)
Query: 47 SRSVFVGNVDYSCTPEEV----QQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAV 101
S++VFV D S +E+ Q HF +CG +NRV+I D + G KG AY++F S++
Sbjct: 339 SQTVFVRGFDRSLGEDEIRSALQDHFGACGDINRVSIPKDYETGNVKGMAYMDFGDSDSF 398
Query: 102 QEALHLNESELHGRQLKV 119
+AL LN SELHG L V
Sbjct: 399 NKALELNGSELHGNYLTV 416
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%)
Query: 46 DSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEAL 105
+S+++FVGN+ + +++ F+ G V +D G+ KG+ +VEF E ++AL
Sbjct: 237 ESKTLFVGNLSFQIEQADLENFFKDVGKPVHVRFASDHDGRFKGFGHVEFESPEVAKKAL 296
Query: 106 HLNESELHGRQLKVTVKR 123
LN L R++++ + R
Sbjct: 297 ELNGELLLNREVRLDMAR 314
>gi|358332953|dbj|GAA51534.1| squamous cell carcinoma antigen recognized by T-cells 3 [Clonorchis
sinensis]
Length = 898
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 46/74 (62%)
Query: 32 PAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYA 91
P A G + + D R+VFV N+DYS T +++++ F+ CG ++ V + D G+ KGYA
Sbjct: 610 PKAHGEHVVHDPSRDDRTVFVSNLDYSTTEDDLRRTFEECGKLSSVRLVRDYAGRSKGYA 669
Query: 92 YVEFLQSEAVQEAL 105
YVEF Q+ A AL
Sbjct: 670 YVEFEQASAADVAL 683
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 10/98 (10%)
Query: 50 VFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNE 109
+FV N+D T ++Q F GTV V I T + G PKG+AYVEF ++ AL +
Sbjct: 739 LFVRNLDKRVTAHALEQLFGEHGTVVSVRIATYRNGAPKGHAYVEFANADQASRALVATD 798
Query: 110 SELHGRQLKVTVKRTNVP-----GM----KQHRPRRPN 138
L G + + V +N P G+ + ++P +PN
Sbjct: 799 GLLVGSK-NIAVAISNPPVRNPTGLAVTKQSNQPTKPN 835
>gi|47230518|emb|CAF99711.1| unnamed protein product [Tetraodon nigroviridis]
Length = 172
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 56/105 (53%), Gaps = 12/105 (11%)
Query: 42 REEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGY------AYVE 94
R + D+RSV+VGNVDY T +E++ HF CG VNRVTI D+F G PKG+
Sbjct: 52 RIDADNRSVYVGNVDYGATADELEIHFNGCGPVNRVTILCDRFSGHPKGFCPRGQICQAS 111
Query: 95 FLQSEAVQEAL----HLNESELHG-RQLKVTVKRTNVPGMKQHRP 134
Q+E EA+ + S LH R + T+ PG+ RP
Sbjct: 112 APQTEGAIEAVTPEAEVVVSVLHDTRTVPEGDSGTSPPGLNIRRP 156
>gi|449461723|ref|XP_004148591.1| PREDICTED: uncharacterized protein LOC101206235 [Cucumis sativus]
Length = 737
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 5/78 (6%)
Query: 47 SRSVFVGNVDYSCTPEEV----QQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAV 101
S++VFV D S +E+ Q HF +CG +NRV+I D + G KG AY++F S++
Sbjct: 576 SQTVFVRGFDRSLGEDEIRSALQDHFGACGDINRVSIPKDYETGNVKGMAYMDFGDSDSF 635
Query: 102 QEALHLNESELHGRQLKV 119
+AL LN SELHG L V
Sbjct: 636 NKALELNGSELHGNYLTV 653
>gi|297737390|emb|CBI26591.3| unnamed protein product [Vitis vinifera]
Length = 151
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 43/55 (78%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNV 55
M+ RLKE+EEEA ALR+M AKV EM + QD ++ ++ A +EEVDSRS++VGN+
Sbjct: 50 MRKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSASATQAEKEEVDSRSIYVGNM 104
>gi|294882258|ref|XP_002769662.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239873262|gb|EER02380.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 214
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEAL 105
S+SVF+GN+ +S T E ++Q F CG + RV+I TD + G+ KG+A+++F ++ ++A+
Sbjct: 95 SKSVFIGNLPFSMTKEWLEQIFSWCGDIERVSIPTDWESGKIKGFAFLDFADEDSAEKAV 154
Query: 106 HLNESELHGRQLKVT 120
N + GR L++
Sbjct: 155 GKNGEDCEGRDLRIN 169
>gi|21592882|gb|AAM64832.1| unknown [Arabidopsis thaliana]
Length = 320
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 43 EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAV 101
E+ SR++FV NV + T + + +HF G V + I TD GQP G AY+EF + EA
Sbjct: 157 EDASSRTIFVANVHFGATKDSLSRHFNKFGEVLKAFIVTDPATGQPSGSAYIEFTRKEAA 216
Query: 102 QEALHLNESELHGRQLKVTVKRTN 125
+ AL L+ + R LK+ VK +N
Sbjct: 217 ENALSLDGTSFMSRILKI-VKGSN 239
>gi|270010528|gb|EFA06976.1| hypothetical protein TcasGA2_TC009936 [Tribolium castaneum]
Length = 469
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 50 VFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLN 108
VFVGN+ + T EE+ +HF G + V I TDK +P+G+AYVE A Q+AL L+
Sbjct: 341 VFVGNLPFDATKEEIVEHFSKAGDIRHVRIPTDKHSNKPRGFAYVELENEVAYQKALSLH 400
Query: 109 ESELHGRQLKV 119
+++ GR++ V
Sbjct: 401 HTQIKGRRINV 411
>gi|297737935|emb|CBI27136.3| unnamed protein product [Vitis vinifera]
Length = 691
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 7/117 (5%)
Query: 7 EMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQ 66
EM + T +Q +K G + + + PA E S+++FVGN+ +S E+V+
Sbjct: 414 EMVDAETPAKQTDSKSGKK--APKTPA-----TPQVESTGSKTLFVGNLSFSVQKEDVEH 466
Query: 67 HFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKR 123
F+ G V V +D G+ KG+ +VEF EA Q+AL +N +L GR +++ + R
Sbjct: 467 FFKDAGEVVDVRFSSDADGRFKGFGHVEFATPEAAQKALKMNGKDLLGRAVRLDLAR 523
>gi|413918640|gb|AFW58572.1| hypothetical protein ZEAMMB73_910026 [Zea mays]
Length = 390
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 27 ASKQDPAAGGSSLANREEV-DSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF- 84
A K AAG ++ E DSR+VFV NV + + + + +HF G V + I TD
Sbjct: 195 AQKASGAAGSNTTGQPEGGPDSRTVFVSNVHFGSSKDALSRHFNKFGAVLKTHIVTDGVT 254
Query: 85 GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRT 124
GQ G AY+EFL E+ ++AL LN + R LKV K +
Sbjct: 255 GQSTGSAYIEFLHKESAEQALTLNGTSFMSRILKVVRKSS 294
>gi|359472731|ref|XP_002277195.2| PREDICTED: uncharacterized protein LOC100262769 [Vitis vinifera]
Length = 664
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 7/117 (5%)
Query: 7 EMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQ 66
EM + T +Q +K G + + PA E S+++FVGN+ +S E+V+
Sbjct: 368 EMVDAETPAKQTDSKSGKKAP--KTPA-----TPQVESTGSKTLFVGNLSFSVQKEDVEH 420
Query: 67 HFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKR 123
F+ G V V +D G+ KG+ +VEF EA Q+AL +N +L GR +++ + R
Sbjct: 421 FFKDAGEVVDVRFSSDADGRFKGFGHVEFATPEAAQKALKMNGKDLLGRAVRLDLAR 477
>gi|313239216|emb|CBY14172.1| unnamed protein product [Oikopleura dioica]
Length = 584
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/130 (31%), Positives = 67/130 (51%), Gaps = 14/130 (10%)
Query: 41 NREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQ-PKGYAYVEFLQSE 99
+ + D R+VFV +D T E+++HFQ CGT+ RVTI D+F + KG AY++F +
Sbjct: 455 DSSDTDKRTVFVSGLDVITTEPELKEHFQVCGTIVRVTILRDRFTRMSKGCAYIQFATLD 514
Query: 100 AVQEALHLNESELHGRQLKVTVKRT---------NVPGMKQHRPRRPNPFMVYQSRGAII 150
Q A + +E+HG+ ++VT K H+P +P+ +QS
Sbjct: 515 QRQTADVFDNTEIHGKTIRVTQKVNRAELHSAPPTATDTAYHKPYKPH----FQSTKPGN 570
Query: 151 PPFLYSPYGY 160
P+ ++ GY
Sbjct: 571 NPYTWTRSGY 580
>gi|21700195|dbj|BAC02896.1| tobacco nucleolin [Nicotiana tabacum]
Length = 620
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 106
S+++FVGN+ YS +V+ F+ G V V T + G KGY +VEF+ +EA +AL
Sbjct: 366 SKTLFVGNLSYSVEQADVENFFKDAGEVQEVRFSTHEDGSFKGYGHVEFVTAEAAHKALE 425
Query: 107 LNESELHGRQLKVTVKR 123
LN +L GR +++ + R
Sbjct: 426 LNGQDLLGRAVRLDLAR 442
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 6/77 (7%)
Query: 49 SVFVGNVDYSCTPEEV----QQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFL--QSEAVQ 102
++FV D + +++ ++HF SCG + + I TD G KG AY+EF S+A+
Sbjct: 468 TIFVRGFDKNEAEDQIRSSLEEHFASCGKIFKTRIPTDPEGYIKGMAYIEFANGDSDALN 527
Query: 103 EALHLNESELHGRQLKV 119
+AL L+ SE+ G L V
Sbjct: 528 KALELDGSEVGGYNLTV 544
>gi|302828556|ref|XP_002945845.1| hypothetical protein VOLCADRAFT_54847 [Volvox carteri f.
nagariensis]
gi|300268660|gb|EFJ52840.1| hypothetical protein VOLCADRAFT_54847 [Volvox carteri f.
nagariensis]
Length = 220
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 36 GSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKGYAYVE 94
G++ A DS VFVGN+ + T ++V++HF+ CG + V + D + G+ +G+A+VE
Sbjct: 49 GNAAATNGGTDSTRVFVGNLSWKATEDDVRKHFKDCGKIVNVRMGVDPETGRSRGFAHVE 108
Query: 95 FLQSEAVQEALHLNESELHGRQLKVTV 121
F + ++A+ +E+ GR +KV V
Sbjct: 109 FGDAAQAKKAVSKAGTEIDGRAIKVEV 135
>gi|145338423|ref|NP_566430.3| RNA binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
gi|332641706|gb|AEE75227.1| RNA binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
Length = 638
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 43 EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAV 101
E+ SR++FV NV + T + + +HF G V + I TD GQP G AY+EF + EA
Sbjct: 475 EDASSRTIFVANVHFGATKDSLSRHFNKFGEVLKAFIVTDPATGQPSGSAYIEFTRKEAA 534
Query: 102 QEALHLNESELHGRQLKVTVKRTN 125
+ AL L+ + R LK+ VK +N
Sbjct: 535 ENALSLDGTSFMSRILKI-VKGSN 557
>gi|12321948|gb|AAG51005.1|AC069474_4 unknown protein; 13339-10119 [Arabidopsis thaliana]
Length = 674
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 43 EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAV 101
E+ SR++FV NV + T + + +HF G V + I TD GQP G AY+EF + EA
Sbjct: 511 EDASSRTIFVANVHFGATKDSLSRHFNKFGEVLKAFIVTDPATGQPSGSAYIEFTRKEAA 570
Query: 102 QEALHLNESELHGRQLKVTVKRTN 125
+ AL L+ + R LK+ VK +N
Sbjct: 571 ENALSLDGTSFMSRILKI-VKGSN 593
>gi|348575610|ref|XP_003473581.1| PREDICTED: RNA-binding protein 34-like [Cavia porcellus]
Length = 430
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 50 VFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLN 108
VFVGN+ Y V++HF CG++ V + D+ G KG+ YV F ++AV AL LN
Sbjct: 288 VFVGNLPYKVEETAVKEHFLDCGSIVAVRLVRDRVTGVGKGFGYVLFENTDAVHLALKLN 347
Query: 109 ESELHGRQLKVTVKRTNVPGMKQH 132
SEL GR+L+V ++ N +KQ+
Sbjct: 348 NSELMGRKLRV-MRSVNKEKLKQN 370
>gi|11994405|dbj|BAB02407.1| unnamed protein product [Arabidopsis thaliana]
Length = 662
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 43 EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAV 101
E+ SR++FV NV + T + + +HF G V + I TD GQP G AY+EF + EA
Sbjct: 499 EDASSRTIFVANVHFGATKDSLSRHFNKFGEVLKAFIVTDPATGQPSGSAYIEFTRKEAA 558
Query: 102 QEALHLNESELHGRQLKVTVKRTN 125
+ AL L+ + R LK+ VK +N
Sbjct: 559 ENALSLDGTSFMSRILKI-VKGSN 581
>gi|413918637|gb|AFW58569.1| hypothetical protein ZEAMMB73_910026 [Zea mays]
Length = 588
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 27 ASKQDPAAGGSSLANREEV-DSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF- 84
A K AAG ++ E DSR+VFV NV + + + + +HF G V + I TD
Sbjct: 393 AQKASGAAGSNTTGQPEGGPDSRTVFVSNVHFGSSKDALSRHFNKFGAVLKTHIVTDGVT 452
Query: 85 GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVK 122
GQ G AY+EFL E+ ++AL LN + R LKV K
Sbjct: 453 GQSTGSAYIEFLHKESAEQALTLNGTSFMSRILKVVRK 490
>gi|226494638|ref|NP_001148871.1| RNA recognition motif family protein [Zea mays]
gi|195622800|gb|ACG33230.1| RNA recognition motif family protein [Zea mays]
Length = 706
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 27 ASKQDPAAGGSSLANREEV-DSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF- 84
A K AAG ++ E DSR+VFV NV + + + + +HF G V + I TD
Sbjct: 511 AQKASGAAGSNTTGQPEGGPDSRTVFVSNVHFGSSKDALSRHFNKFGAVLKTHIVTDGVT 570
Query: 85 GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVK 122
GQ G AY+EFL E+ ++AL LN + R LKV K
Sbjct: 571 GQSTGSAYIEFLHKESAEQALTLNGTSFMSRILKVVRK 608
>gi|413918635|gb|AFW58567.1| RNA recognition motif family protein [Zea mays]
Length = 706
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 27 ASKQDPAAGGSSLANREEV-DSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF- 84
A K AAG ++ E DSR+VFV NV + + + + +HF G V + I TD
Sbjct: 511 AQKASGAAGSNTTGQPEGGPDSRTVFVSNVHFGSSKDALSRHFNKFGAVLKTHIVTDGVT 570
Query: 85 GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVK 122
GQ G AY+EFL E+ ++AL LN + R LKV K
Sbjct: 571 GQSTGSAYIEFLHKESAEQALTLNGTSFMSRILKVVRK 608
>gi|168017441|ref|XP_001761256.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687596|gb|EDQ73978.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 731
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 70/129 (54%), Gaps = 27/129 (20%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLA-----NREEVDSRSVFVGNV 55
MK +L++++ + T LR A+V E+ + PAAG +++ ++E+++SRS+FV NV
Sbjct: 447 MKKKLRQIQLDMTKLRARQAEVTKEV--QNSPAAGLRTMSFESQPSQEDINSRSIFVTNV 504
Query: 56 DYSCTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKG-------------------YAYVEF 95
++ T ++ HF CG +NRVT+ + G+PKG A+VEF
Sbjct: 505 HFAATQAALRAHFGGCGIINRVTLLAEPATGKPKGDLKGCPNLHDAKTSLHVDRSAFVEF 564
Query: 96 LQSEAVQEA 104
+AV+ A
Sbjct: 565 ATKDAVEIA 573
>gi|449665135|ref|XP_002159315.2| PREDICTED: cleavage stimulation factor subunit 2-like [Hydra
magnipapillata]
Length = 413
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 44 EVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQ 102
E +RSVFVGN+ Y + ++++ F G V + D+ G+PKGY + E+ SE Q
Sbjct: 22 EKSARSVFVGNIPYEASDDQLKDIFSQAGPVLSFRLVYDRETGKPKGYGFCEYKDSETAQ 81
Query: 103 EAL-HLNESELHGRQLKV 119
A+ +LN +E+HGRQL+V
Sbjct: 82 SAMRNLNGTEIHGRQLRV 99
>gi|326497679|dbj|BAK05929.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 321
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 64/108 (59%), Gaps = 4/108 (3%)
Query: 16 RQMHAKVGNE-MASKQDPAAGGSSLANREEV-DSR-SVFVGNVDYSCTPEEVQQHFQSCG 72
R+M K+ +AS+++P + ++ + +SR ++VGN+ +S P+ +++HF CG
Sbjct: 197 REMFVKLAAHVIASRRNPGGLSHTPPMKDHIFESRYKIYVGNLAWSVQPQHLREHFTKCG 256
Query: 73 TVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
TV + TD K G+ + Y ++ F +E ++ AL LN +E HGR + V
Sbjct: 257 TVVSTRLLTDRKGGRSRVYGFLSFSSAEELEAALQLNNTEFHGRDIIV 304
Score = 35.4 bits (80), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 11/135 (8%)
Query: 20 AKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTI 79
A G E +PAA S +R R +FV N+ C +E+ + F GTV V +
Sbjct: 100 AAHGEEEHYGGEPAAEDGSGWDRRRPRPRELFVCNLPRRCGVDELLELFGPYGTVLSVEV 159
Query: 80 RTD-KFGQPKGYAYVEFLQSEAVQEALH-LNESELHGRQL------KVTVKRTNVPGMKQ 131
D + G +G +V + A++ L+ +L GR++ V R N PG
Sbjct: 160 SRDAETGISRGCGFVTMRSLAEARTAINALDGFDLDGREMFVKLAAHVIASRRN-PGGLS 218
Query: 132 HRPRRPNPFMVYQSR 146
H P P +++SR
Sbjct: 219 HTP--PMKDHIFESR 231
>gi|348538194|ref|XP_003456577.1| PREDICTED: RNA-binding protein 34-like [Oreochromis niloticus]
Length = 425
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH 106
RSVFVGN+ + ++HF+ CGTV V + DK G KG+ YV F +++VQ AL
Sbjct: 263 RSVFVGNLSFDINELTFRRHFEECGTVEAVRLVRDKNSGLGKGFGYVLFESTDSVQLALK 322
Query: 107 LNESELHGRQLKV 119
L+ S+L GR ++V
Sbjct: 323 LDGSKLEGRSIRV 335
>gi|410917640|ref|XP_003972294.1| PREDICTED: RNA-binding protein 34-like [Takifugu rubripes]
Length = 399
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALH 106
RSVFVGN+ + + HF+ CG+V V +R G KG+ Y+ F ++AVQ AL
Sbjct: 250 RSVFVGNLSFDINELAFRHHFEDCGSVEAVRLVRDQNSGLGKGFGYILFKSADAVQLALK 309
Query: 107 LNESELHGRQLKV--TVKRTNVPGMKQHRPRRPNP 139
L+ S+L GR+++V ++K + G K + P P
Sbjct: 310 LDGSKLQGRRIRVRRSLKESENKGAKGRFGKGPAP 344
>gi|268569444|ref|XP_002640524.1| Hypothetical protein CBG18686 [Caenorhabditis briggsae]
Length = 84
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL-H 106
SV+VGNV Y + EE+ Q F S G VN V I D+ G+P+G+A+VEF Q A+
Sbjct: 7 SVYVGNVPYQVSEEEIGQWFSSVGVVNNVRIVFDRETGRPRGFAFVEFTDEAGAQRAVEQ 66
Query: 107 LNESELHGRQLKVT 120
LN + +GR L+V
Sbjct: 67 LNGASFNGRNLRVN 80
>gi|323510053|dbj|BAJ77920.1| cgd3_4150 [Cryptosporidium parvum]
Length = 747
Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 50/81 (61%), Gaps = 5/81 (6%)
Query: 41 NREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEA 100
N DSR V+ GN+ YSCT EE++ F+ CG++ RV++ +D KG A++ F Q E
Sbjct: 536 NTNNKDSREVYCGNLPYSCTEEEIRGLFEECGSIERVSVLSD-----KGCAFITFEQEEG 590
Query: 101 VQEALHLNESELHGRQLKVTV 121
+ A+ N++E GR L++ +
Sbjct: 591 AKSAIQWNQTEYKGRMLRINM 611
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTI-RTDKFGQPKGYAYVEFLQSEAVQEALHL 107
SV V N+ +S E V+ F CG V RV+I R G+ +G+A VEF E +Q AL L
Sbjct: 629 SVIVRNIPFSSDDESVKSFFNGCGVVKRVSIPRYSDTGKMRGFAMVEFENDEQIQNALKL 688
Query: 108 NESELHGRQLKVTV 121
+ + ++GR++ + +
Sbjct: 689 SGTSMNGREVTIEI 702
>gi|126644829|ref|XP_001388131.1| cutinase negative acting protein [Cryptosporidium parvum Iowa II]
gi|126117359|gb|EAZ51459.1| cutinase negative acting protein, putative [Cryptosporidium parvum
Iowa II]
Length = 711
Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 50/81 (61%), Gaps = 5/81 (6%)
Query: 41 NREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEA 100
N DSR V+ GN+ YSCT EE++ F+ CG++ RV++ +D KG A++ F Q E
Sbjct: 500 NTNNKDSREVYCGNLPYSCTEEEIRGLFEECGSIERVSVLSD-----KGCAFITFEQEEG 554
Query: 101 VQEALHLNESELHGRQLKVTV 121
+ A+ N++E GR L++ +
Sbjct: 555 AKSAIQWNQTEYKGRMLRINM 575
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTI-RTDKFGQPKGYAYVEFLQSEAVQEALHL 107
SV V N+ +S E V+ F CG V RV+I R G+ +G+A VEF E +Q AL L
Sbjct: 593 SVIVRNIPFSSDDESVKSFFNGCGVVKRVSIPRYSDTGKMRGFAMVEFENDEQIQNALKL 652
Query: 108 NESELHGRQLKVTV 121
+ + ++GR++ + +
Sbjct: 653 SGTSMNGREVTIEI 666
>gi|365982827|ref|XP_003668247.1| hypothetical protein NDAI_0A08510 [Naumovozyma dairenensis CBS 421]
gi|343767013|emb|CCD23004.1| hypothetical protein NDAI_0A08510 [Naumovozyma dairenensis CBS 421]
Length = 474
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 12/85 (14%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALH 106
RS+FVGN+D+ E + HF+SCG + V IR K KG+AYV+F + ++V +AL
Sbjct: 299 RSIFVGNLDFEEAEESLWNHFKSCGEIEYVRIIRDAKTNMGKGFAYVQFKELQSVNKALL 358
Query: 107 LN-----------ESELHGRQLKVT 120
LN +S+ GR+L+VT
Sbjct: 359 LNDKVMMKSNVDKDSKKKGRKLRVT 383
>gi|313234527|emb|CBY10484.1| unnamed protein product [Oikopleura dioica]
Length = 333
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 32 PAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGY 90
P G E +RSVFVGN+ Y T E+++ F G V + D+ G+PKGY
Sbjct: 9 PQGGFGDFGGESEKAARSVFVGNIPYEATEEQIRDIFNEVGVVLSFRLVYDRETGKPKGY 68
Query: 91 AYVEFLQSEAVQEAL-HLNESELHGRQLKV 119
+ E+ ++ A+ +LN ELHGR L+V
Sbjct: 69 GFCEYKDTDTAMSAMRNLNTRELHGRNLRV 98
>gi|313243391|emb|CBY42167.1| unnamed protein product [Oikopleura dioica]
Length = 199
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 32 PAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGY 90
P G E +RSVFVGN+ Y T E+++ F G V + D+ G+PKGY
Sbjct: 9 PQGGFGDFGGESEKAARSVFVGNIPYEATEEQIRDIFNEVGVVLSFRLVYDRETGKPKGY 68
Query: 91 AYVEFLQSEAVQEAL-HLNESELHGRQLKV 119
+ E+ ++ A+ +LN ELHGR L+V
Sbjct: 69 GFCEYKDTDTAMSAMRNLNTRELHGRNLRV 98
>gi|341882516|gb|EGT38451.1| hypothetical protein CAEBREN_23840 [Caenorhabditis brenneri]
Length = 84
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH- 106
SV+VGN + T E++ Q F + G VN V I D+ G+P+G+A+VEF A Q A+
Sbjct: 6 SVYVGNAPFQTTEEQIGQFFSNVGQVNNVRIVYDRETGRPRGFAFVEFADEAAAQRAVQE 65
Query: 107 LNESELHGRQLKVTV 121
LN ++ +GRQL+V +
Sbjct: 66 LNGADFNGRQLRVNL 80
>gi|120537458|gb|AAI30002.1| LOC390748 protein [Homo sapiens]
Length = 255
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 52/95 (54%), Gaps = 12/95 (12%)
Query: 3 IRLKEMEEEATALRQMHA--KVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
++ + EEE TA Q+ + VG ++ + + E D RSV+VGNVDY +
Sbjct: 109 VQQQAEEEEGTAAGQLLSPETVGCPLSGTPE---------EKVEADHRSVYVGNVDYGGS 159
Query: 61 PEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVE 94
EE++ HF CG V+RVTI DKF G PKG E
Sbjct: 160 AEELEAHFSRCGEVHRVTILCDKFSGHPKGCCRKE 194
>gi|432104867|gb|ELK31379.1| Embryonic polyadenylate-binding protein 2 [Myotis davidii]
Length = 161
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 31 DPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKG 89
DP GG L N +R VDY E++ +F CG V +VTI +KF G PKG
Sbjct: 14 DPRGGG--LCN--SALTRPCLC-QVDYGVIAGELEAYFNICGEVQQVTILCNKFSGHPKG 68
Query: 90 YAYVEFLQSEAVQEALHLNESELHGRQLKVTV 121
YAY+EF + Q A+ L++S GR +KV +
Sbjct: 69 YAYIEFATESSAQAAVGLDKSIFQGRVIKVLL 100
>gi|374106883|gb|AEY95792.1| FACR274Wp [Ashbya gossypii FDAG1]
Length = 426
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALH 106
RSVFVGN+D+ + E + +HF SCG + V I D K KG+AYV+F +V +AL
Sbjct: 259 RSVFVGNLDFEESEESLWKHFMSCGPIEYVRIVRDPKTNVGKGFAYVQFADLVSVNKALL 318
Query: 107 LNESEL---HGRQLKVT 120
LN+ ++ GR+L+VT
Sbjct: 319 LNDKKMAVGKGRKLRVT 335
>gi|45185960|ref|NP_983676.1| ACR274Wp [Ashbya gossypii ATCC 10895]
gi|74694749|sp|Q75BJ7.1|NOP12_ASHGO RecName: Full=Nucleolar protein 12
gi|44981750|gb|AAS51500.1| ACR274Wp [Ashbya gossypii ATCC 10895]
Length = 426
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALH 106
RSVFVGN+D+ + E + +HF SCG + V I D K KG+AYV+F +V +AL
Sbjct: 259 RSVFVGNLDFEESEESLWKHFMSCGPIEYVRIVRDPKTNVGKGFAYVQFADLVSVNKALL 318
Query: 107 LNESEL---HGRQLKVT 120
LN+ ++ GR+L+VT
Sbjct: 319 LNDKKMAVGKGRKLRVT 335
>gi|326503120|dbj|BAJ99185.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 724
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 106
S+++FVGN+ Y+ +EV+Q F G V+ + T G KG+A+VEF +EA Q+A
Sbjct: 464 SKTLFVGNLSYNVENDEVKQFFGEAGEVSDIRFATADDGSFKGFAHVEFATTEAAQKAYE 523
Query: 107 LNESELHGRQLKVTVKR 123
LN +L GR +++ R
Sbjct: 524 LNGHDLSGRPVRLDFAR 540
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 32 PAAGGSSLANREEVDSRSVFVGNVDYSCTPEEV----QQHFQSCGTVNRVTIRTD-KFGQ 86
P +G + + ++ S + FV D S +E+ Q+HF SCG + RV+I D + G
Sbjct: 547 PGSGRDNSSFKKSGQSNTAFVRGFDSSLGEDEIRSSLQEHFSSCGAIGRVSIPKDYETGT 606
Query: 87 PKGYAYVEFLQSEAVQEALHLNESEL 112
KG AYVEF ++ +AL LN S +
Sbjct: 607 SKGIAYVEFTDGNSLPKALELNGSNI 632
>gi|299469902|emb|CBN76756.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 774
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 48/139 (34%), Positives = 74/139 (53%), Gaps = 11/139 (7%)
Query: 4 RLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEE 63
R + + T LR+ AK G AS DP A A + + DS +V+VGN+D S T ++
Sbjct: 279 RTYTLTQVETDLRE--AKKGRLYASMSDPMAS----AAQPDPDS-TVYVGNLDPSVTEDD 331
Query: 64 VQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVK 122
+++ F CG + V I DK G+ +G A+V F + V +AL L+ +L G+ +K+
Sbjct: 332 IREFFAECGAIASVRIPQDKETGKMRGIAFVAFAKHSGVLQALTLHMDDLKGQSVKIRRA 391
Query: 123 RTNVP---GMKQHRPRRPN 138
T P G QH+ + PN
Sbjct: 392 DTAKPRDNGGAQHKKQVPN 410
>gi|296412075|ref|XP_002835753.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629543|emb|CAZ79910.1| unnamed protein product [Tuber melanosporum]
Length = 453
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 64/112 (57%), Gaps = 10/112 (8%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALH 106
R VF+GN+D+ E + +HF +CG V V +R K KG+AYV+F +V EAL
Sbjct: 275 RCVFIGNLDFEAQEENLWRHFGTCGKVESVRVVRDAKTNVGKGFAYVQFEDPMSVDEALL 334
Query: 107 LNESEL-HGRQLKVTVKRTNVPGMKQHRPRRPNPFM----VYQSRGAIIPPF 153
L+ ++ + R+L+V+ +T +K+++ +P+P + +S+G IP
Sbjct: 335 LDSKKMANDRKLRVSRAKT----IKRNQTGKPDPPLSDKRSSRSKGVYIPKL 382
>gi|403343651|gb|EJY71156.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 491
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 106
S ++FVGN+ + T + +++HF CG + V + G+ KG+A+VEF E+ Q+AL
Sbjct: 343 STTLFVGNISFQTTQDSLERHFSKCGPIKAVRVAMGDDGRVKGFAHVEFESPESAQKALE 402
Query: 107 LNESELHGRQLKVTV 121
+N + GR+L++ +
Sbjct: 403 MNGAPCDGRELRLDL 417
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 43 EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQ 102
E+ D + +FVGN+ + T + + Q F GTV V + + G+PKG+A+VEF + Q
Sbjct: 235 EDDDKKELFVGNLSFHTTEDSLGQAFGEYGTVTNVKL-PQQDGRPKGFAFVEFATHKEAQ 293
Query: 103 EALHL-NESELHGRQLKVT 120
AL N + GR L++
Sbjct: 294 AALDAYNGQDFEGRALRIN 312
>gi|356538573|ref|XP_003537777.1| PREDICTED: uncharacterized protein LOC100786132 [Glycine max]
Length = 748
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 42 REEV-DSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEA 100
REE S+++FVGN+ +S +V+ F+ G V V TD G+ KG+ +VEF +EA
Sbjct: 472 REESGTSKTLFVGNLPFSVERADVEGFFKDAGEVVDVRFATDDTGKFKGFGHVEFATAEA 531
Query: 101 VQEALHLNESELHGRQLKVTVKR 123
Q AL LN +L R+L++ + R
Sbjct: 532 AQNALGLNGQQLFNRELRLDLAR 554
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 50/78 (64%), Gaps = 5/78 (6%)
Query: 47 SRSVFVGNVDYSCTPEEV----QQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAV 101
S+++FV D S +E+ Q+HF SCG + RV+I D + G KG+AYV+F ++++
Sbjct: 578 SQTIFVRGFDTSLGEDEIRGSLQEHFGSCGDITRVSIPKDYESGAVKGFAYVDFGDADSM 637
Query: 102 QEALHLNESELHGRQLKV 119
+AL L+E+EL G L V
Sbjct: 638 GKALELHETELGGYTLTV 655
>gi|428170953|gb|EKX39874.1| hypothetical protein GUITHDRAFT_154318 [Guillardia theta CCMP2712]
Length = 270
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 60/114 (52%), Gaps = 11/114 (9%)
Query: 25 EMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF 84
E A K+D AAG D R VF+G + + T +++++ F+SCG + + + +
Sbjct: 12 EKAKKEDGAAG----------DKRRVFLGGLPFKATEKDIKKMFESCGAIENIELPMNAD 61
Query: 85 GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPN 138
+P G+ ++ F +++V +A+ ++ EL GR +KV + G +P PN
Sbjct: 62 SRPAGFGFLTFKDADSVAKAVAMDGQELMGRWVKVK-EADGTEGSAGKKPFTPN 114
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHL 107
++F+GN+ + + ++ F CG V V TD+ G KG+ +V+F +S A A+
Sbjct: 126 TIFMGNLSWDVDEDTIRSFFADCGEVVNVRFATDRETGDFKGFGHVQFAESSATDLAVAK 185
Query: 108 NESELHGRQLKVTVKRTNVP 127
+ GR ++V P
Sbjct: 186 GGEFVAGRAIRVDFAEDRKP 205
>gi|407042435|gb|EKE41325.1| RNA recognition motif domain containing protein [Entamoeba nuttalli
P19]
Length = 178
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 44 EVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQE 103
E D+RSV V N+D + T E++QQ F + G V VT+ K G K YAY+E EA +
Sbjct: 55 ERDNRSVCVTNLDPNATKEQLQQLFSTVGNVLLVTLPLTKSGVSKRYAYIELDSVEARER 114
Query: 104 AL-HLNESELHGRQLKVTVKRTNV 126
A+ +LN ++L ++ V VKRTN+
Sbjct: 115 AVTNLNGTKLGENEISVAVKRTNI 138
>gi|392591591|gb|EIW80918.1| hypothetical protein CONPUDRAFT_103939 [Coniophora puteana
RWD-64-598 SS2]
Length = 1056
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%)
Query: 44 EVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQE 103
+ + + V+V + T E+++ F++ GTVN V + TDK GQ KG+A+VEF + Q
Sbjct: 803 DANEKEVYVAGLSKYTTKEDLKGVFKTYGTVNDVRLVTDKNGQSKGFAFVEFESETSAQA 862
Query: 104 ALHLNESELHGRQLKVTVKRTNV 126
AL N EL R++ VT+ + V
Sbjct: 863 ALSANNYELRSRRIAVTLADSRV 885
>gi|189500331|ref|YP_001959801.1| RNP-1 like RNA-binding protein [Chlorobium phaeobacteroides BS1]
gi|189495772|gb|ACE04320.1| RNP-1 like RNA-binding protein [Chlorobium phaeobacteroides BS1]
Length = 89
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEF-LQSEAVQEALH 106
++++GN+DY + E++++ F G V+ I +DKF G+ KG+ +VE +EA Q
Sbjct: 2 NIYIGNLDYGVSEEDLREAFGEFGEVSSANIISDKFTGRSKGFGFVEMPNDAEANQAIDA 61
Query: 107 LNESELHGRQLKVTVKRTNVPGMKQHRPRRP 137
LN+++L+GR +KV R ++ RP RP
Sbjct: 62 LNDTDLNGRSIKVNQARP-----REERPSRP 87
>gi|67478542|ref|XP_654661.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56471729|gb|EAL49274.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|449709729|gb|EMD48937.1| RNA recognition domain containing protein [Entamoeba histolytica
KU27]
Length = 178
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 44 EVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQE 103
E D+RSV V N+D + T E++QQ F + G V VT+ K G K YAY+E EA +
Sbjct: 55 ERDNRSVCVTNLDPNATKEQLQQLFSTVGNVLLVTLPLTKSGVSKRYAYIELDSVEARER 114
Query: 104 AL-HLNESELHGRQLKVTVKRTNV 126
A+ +LN ++L ++ V VKRTN+
Sbjct: 115 AVTNLNGTKLGENEISVAVKRTNI 138
>gi|401840528|gb|EJT43313.1| NOP12-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 460
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTI-RTDKFGQPKGYAYVEFLQSEAVQEALH 106
RS+FVGN+D+ E + +HF+SCG + V I R K KG+AYV+F E+V +AL
Sbjct: 280 RSIFVGNLDFEEIEESLWKHFESCGGIEYVRIVRDSKTNMGKGFAYVQFKDLESVNKALL 339
Query: 107 LNE 109
LNE
Sbjct: 340 LNE 342
>gi|365758459|gb|EHN00299.1| Nop12p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 460
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTI-RTDKFGQPKGYAYVEFLQSEAVQEALH 106
RS+FVGN+D+ E + +HF+SCG + V I R K KG+AYV+F E+V +AL
Sbjct: 280 RSIFVGNLDFEEIEESLWKHFESCGGIEYVRIVRDSKTNMGKGFAYVQFKDLESVNKALL 339
Query: 107 LNE 109
LNE
Sbjct: 340 LNE 342
>gi|302310751|ref|XP_455433.2| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|223590101|sp|Q6CKV6.2|NOP12_KLULA RecName: Full=Nucleolar protein 12
gi|199425080|emb|CAG98141.2| KLLA0F07799p [Kluyveromyces lactis]
Length = 462
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 49/78 (62%), Gaps = 5/78 (6%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALH 106
RSVFVGN+D+ E + +HF+ CG + V IR K KG+AYV+F ++V +AL
Sbjct: 297 RSVFVGNLDFEEVEESLWKHFEPCGDIEYVRIIRDSKTNMGKGFAYVQFKDFQSVSKALL 356
Query: 107 LNESELH----GRQLKVT 120
L+E ++H R+L+++
Sbjct: 357 LHEKKIHEGKKARKLRIS 374
>gi|268569436|ref|XP_002640522.1| Hypothetical protein CBG18684 [Caenorhabditis briggsae]
Length = 84
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH- 106
S++VGN Y T +E+ F S GTV V I D+ G+P+G+A+VEF + ++ + A++
Sbjct: 7 SIYVGNAPYQTTEQEMGDFFSSVGTVTNVRIVLDRETGRPRGFAFVEFSEQQSAERAVNE 66
Query: 107 LNESELHGRQLKVTV 121
LN ++ +GRQL+V +
Sbjct: 67 LNGADFNGRQLRVNI 81
>gi|167386758|ref|XP_001737893.1| RNA-binding protein SGN1 [Entamoeba dispar SAW760]
gi|165899137|gb|EDR25806.1| RNA-binding protein SGN1, putative [Entamoeba dispar SAW760]
Length = 178
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 44 EVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQE 103
E D+RSV V N+D + T E++QQ F + G V VT+ K G K YAY+E EA +
Sbjct: 55 ERDNRSVCVTNLDPNATKEQLQQLFSTVGNVLLVTLPLTKSGVSKRYAYIELDSVEARER 114
Query: 104 AL-HLNESELHGRQLKVTVKRTNV 126
A+ +LN ++L ++ V VKRTN+
Sbjct: 115 AVTNLNGTKLGENEISVAVKRTNI 138
>gi|409079870|gb|EKM80231.1| hypothetical protein AGABI1DRAFT_73218 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 568
Score = 62.0 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 65/134 (48%), Gaps = 20/134 (14%)
Query: 25 EMASKQDPAAGGSSLANREEVDSR-----------------SVFVGNVDYSCTPEEVQQH 67
EM + PA ++ R+ VD S+FVG + +S + + Q
Sbjct: 268 EMGDARKPAVKPTANGKRKAVDEEQPEAKKVKLDPATPETLSIFVGQLSWSVDNDRLAQE 327
Query: 68 FQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNV 126
F CG V+ T++ D+ G+ +G+ YV F ++AV++AL +N E+ GR +KV + +
Sbjct: 328 FSECGEVSSATVQLDRNTGRSRGFGYVHFSTADAVEKALKMNGYEIDGRAIKVDL--STP 385
Query: 127 PGMKQHRPRRPNPF 140
P Q R RR F
Sbjct: 386 PNSNQIRERRAKVF 399
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL 105
S ++F+GN+ +S T + + +F +V + + TD+ GQ KG+ YVE E ++A
Sbjct: 407 SSTLFIGNLPFSITEDGLWSYFDG-HSVKTIRLPTDRETGQLKGFGYVELENVEDAKKAF 465
Query: 106 H-LNESELHGRQLKV 119
++ E+ GR+++V
Sbjct: 466 EAISGQEIEGRRVRV 480
>gi|401623704|gb|EJS41793.1| nop12p [Saccharomyces arboricola H-6]
Length = 470
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALH 106
RS+FVGN+D+ E + +HF+SCG + V IR K KG+AYV+F ++V +AL
Sbjct: 290 RSIFVGNLDFEEIEESLWKHFESCGDIEYVRIIRDSKTNMGKGFAYVQFKDLQSVNKALL 349
Query: 107 LNE 109
LNE
Sbjct: 350 LNE 352
>gi|242039427|ref|XP_002467108.1| hypothetical protein SORBIDRAFT_01g019710 [Sorghum bicolor]
gi|241920962|gb|EER94106.1| hypothetical protein SORBIDRAFT_01g019710 [Sorghum bicolor]
Length = 664
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 46/75 (61%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 106
S+++FVGN+ YS E+V++ F+ G V + + T G KGY +VEF +EA Q+AL
Sbjct: 412 SKTIFVGNLAYSIEREQVKEFFEEAGEVVDIRLSTFDDGSFKGYGHVEFATAEAAQKALE 471
Query: 107 LNESELHGRQLKVTV 121
+L GR L++ +
Sbjct: 472 FGGRDLMGRSLRIDL 486
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Query: 49 SVFVGNVDYSCTPEEV----QQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQE 103
+VF+ D S +++ ++HF+SCG + R++I D G KG AY++F +++ +
Sbjct: 514 TVFIKGFDTSVGEDQIRSALEEHFRSCGDITRISIPKDYDTGASKGMAYMDFKDPDSLNK 573
Query: 104 ALHLNESEL 112
A +N + L
Sbjct: 574 AYEMNGTYL 582
>gi|392592716|gb|EIW82042.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 589
Score = 62.0 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 40/135 (29%), Positives = 69/135 (51%), Gaps = 5/135 (3%)
Query: 7 EMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQ 66
EM E + A + + +K+ A G ++ E+ +S+FVG + ++ + + +
Sbjct: 294 EMAEPEPPKGKRKADTQDAVPAKKVKIANGDAMDVDNEI--KSIFVGRLSWNVDNDWLAK 351
Query: 67 HFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTN 125
F CG V T++ D+ G+ +G+ YV F SEAV++A+ LN E+ GR V V ++N
Sbjct: 352 EFAECGEVVSATVQMDRSTGRSRGFGYVHFSTSEAVEKAIELNGKEIDGR--AVNVDKSN 409
Query: 126 VPGMKQHRPRRPNPF 140
P R +R F
Sbjct: 410 PPNKDASREKRAKTF 424
Score = 42.7 bits (99), Expect = 0.061, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
Query: 3 IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPE 62
I L E + A+ + N+ AS++ A + + S ++FVGN+ + +
Sbjct: 391 IELNGKEIDGRAVNVDKSNPPNKDASREKRA---KTFGDTTSPPSATLFVGNLSFGMNDD 447
Query: 63 EVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEA-LHLNESELHGRQLKV 119
+ + F G V V + TD+ G+PKG+ YVEF E ++A + EL GR +++
Sbjct: 448 ALWEAFSEHGEVKNVRLPTDRESGRPKGFGYVEFSDVETAKKAHAAMQGVELDGRSVRL 506
>gi|428181978|gb|EKX50840.1| hypothetical protein GUITHDRAFT_85230, partial [Guillardia theta
CCMP2712]
Length = 243
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Query: 40 ANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVN--RVTIRTDKFGQPKGYAYVEFLQ 97
+R SRSVFVGN+ Y+ T E+++ F++ G V R ++ GQPKG+ + EF
Sbjct: 3 GSRGSQASRSVFVGNIPYNATEEQLEDIFRAVGHVVSFRWLVKNSDTGQPKGFGFCEFRD 62
Query: 98 SEAVQEAL-HLNESELHGRQLKV 119
++ + A+ +LN +E +GR L++
Sbjct: 63 AQTAESAIRNLNNTEFNGRLLRI 85
>gi|320163233|gb|EFW40132.1| RNA binding domain-containing protein 39 [Capsaspora owczarzaki
ATCC 30864]
Length = 600
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 56/90 (62%), Gaps = 4/90 (4%)
Query: 32 PAA--GGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKG 89
PAA G +++A + +R V+VG++D++ T +V+ F CG V VT+ D G+ KG
Sbjct: 338 PAAPLGTAAIAMAAKQQTR-VYVGSLDFALTEADVKSLFSPCGEVISVTLNRDN-GKSKG 395
Query: 90 YAYVEFLQSEAVQEALHLNESELHGRQLKV 119
YA+V+F + A + A+ LN E+ GR LKV
Sbjct: 396 YAFVQFADAGAAKLAMELNGVEVAGRPLKV 425
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 40 ANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQS 98
A R+E +V V + + E++Q F CG + V I++D+ G+ G AYVEF
Sbjct: 185 AERDERLKNTVIVHQLPTNVRKHEIEQVFSECGEIRDVAIQSDRARGRAGGVAYVEFKDF 244
Query: 99 EAVQEALHLN 108
AV +A+ L+
Sbjct: 245 AAVSKAMGLS 254
>gi|345491945|ref|XP_001599982.2| PREDICTED: nucleolar protein 12-like [Nasonia vitripennis]
Length = 613
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFL 96
S N++ R+VF+GN+ + T +EV++HF SCG + V I D K G +G YV F
Sbjct: 424 STKNKDHDQKRAVFLGNIPFDITEDEVRKHFDSCGKIESVRIVKDRKSGLSRGIGYVNFE 483
Query: 97 QSEAVQEALHLNESELHGRQLKVTV 121
++V AL LN + L R+++V +
Sbjct: 484 NQDSVTLALELNGTNLKNREIRVQI 508
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 22/126 (17%)
Query: 29 KQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIR-------- 80
++ P S + +D+R+++VGNV T + +++ F+ G ++ + +R
Sbjct: 313 QESPKPKRLSSEEQAALDARTIYVGNVPKEMTVKTIKKLFRPFGEIDSIRVRGVVAEDSR 372
Query: 81 -------TDKFGQPK---GYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMK 130
K PK Y YV F + ++ ++AL LN +L L+V + N K
Sbjct: 373 MSAKVATITKKMHPKVSTVYVYVAFKEEQSAKDALKLNGHKLGENTLRVDLSTKN----K 428
Query: 131 QHRPRR 136
H +R
Sbjct: 429 DHDQKR 434
>gi|426198367|gb|EKV48293.1| hypothetical protein AGABI2DRAFT_142473 [Agaricus bisporus var.
bisporus H97]
Length = 559
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 65/134 (48%), Gaps = 20/134 (14%)
Query: 25 EMASKQDPAAGGSSLANREEVDSR-----------------SVFVGNVDYSCTPEEVQQH 67
EM + PA ++ R+ VD S+FVG + +S + + Q
Sbjct: 268 EMGDARKPAVKPTANGKRKAVDEEQPEAKKVKLDPATPETLSIFVGQLSWSVDNDRLAQE 327
Query: 68 FQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNV 126
F CG V+ T++ D+ G+ +G+ YV F ++AV++AL +N E+ GR +KV + +
Sbjct: 328 FSECGEVSSATVQLDRNTGRSRGFGYVHFSTADAVEKALKMNGYEIDGRAIKVDL--STP 385
Query: 127 PGMKQHRPRRPNPF 140
P Q R RR F
Sbjct: 386 PNSNQIRERRAKVF 399
Score = 36.6 bits (83), Expect = 4.2, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL 105
S ++F+GN+ +S T + + +F +V + + TD+ GQ KG+ YVE E ++A
Sbjct: 407 SSTLFIGNLPFSITEDGLWSYFDG-HSVKTIRLPTDRETGQLKGFGYVELENVEDAKKAF 465
Query: 106 H-LNESELHGRQLKV 119
++ E+ GR+++V
Sbjct: 466 EAISGQEIEGRRVRV 480
>gi|363749889|ref|XP_003645162.1| hypothetical protein Ecym_2633 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888795|gb|AET38345.1| Hypothetical protein Ecym_2633 [Eremothecium cymbalariae
DBVPG#7215]
Length = 430
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 4/89 (4%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALH 106
RSVFVGN+D+ E + +HF+SCG + V IR K KG+AYV+F+ + +V +AL
Sbjct: 263 RSVFVGNLDFEEIEENLWKHFESCGDIEYVRIIRDPKSNVGKGFAYVQFMDAGSVNKALL 322
Query: 107 LNESELH-GRQLKVTVKRTNVPGMKQHRP 134
L+E ++ G+ K+ V R MK+ +P
Sbjct: 323 LHEKKMTIGKCRKLRVSR--CKNMKKVQP 349
>gi|219130905|ref|XP_002185593.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217402933|gb|EEC42891.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 222
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 35 GGSSLANREEVDSRS-VFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYV 93
GG R VD+ + +FVGN+ S T E++ HF+ CG + R ++ GQ KG+ V
Sbjct: 129 GGGRGIGRLNVDAETQLFVGNLAQSTTWRELKDHFRQCGDIQRAEVKNGPAGQSKGFGTV 188
Query: 94 EFLQSEAVQEAL-HLNESELHGRQLKV 119
+FL+ ++A+ LN SEL G ++V
Sbjct: 189 QFLKKSDAKDAITQLNGSELQGNVIEV 215
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 14/106 (13%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 106
+R V+VGN+ +S + ++ H + G V + + G+ KG VE+ E QEA+
Sbjct: 18 NRRVYVGNLSWSVAWQSLKDHMRQAGEVVHAEVIMEYNGRSKGCGIVEYATDEEAQEAIK 77
Query: 107 -LNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQ--SRGAI 149
L ++EL+GR + V R PN YQ SRG I
Sbjct: 78 TLTDTELNGRMIFVREDRET-----------PNQGASYQGESRGWI 112
>gi|167517070|ref|XP_001742876.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779500|gb|EDQ93114.1| predicted protein [Monosiga brevicollis MX1]
Length = 1825
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 40 ANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSE 99
A++ E + R+VFV N+D+S T +E++ F CG + V + + G+ KGYAY+EF +
Sbjct: 642 AHKVEAEDRTVFVKNLDFSVTEDELRARFADCGEIVDVRMPFNHKGKAKGYAYLEFASAS 701
Query: 100 AVQEALHLNESELHGRQLKVT--VKRTNVPGMKQHRPRRPNPFMVY 143
AV AL + + R + V V R+ +P + NP ++
Sbjct: 702 AVNPALSKDRQIMGTRPMLVDRYVDRSQMPSLPFKHTTDKNPKSLF 747
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFL-QSEAVQEALH 106
+S+FV N+DY + E++ F G V V + T G + + YV+F+ +++A +
Sbjct: 744 KSLFVKNLDYKASEAEIKDLFNKHGAVEAVRLVTKFDGSRRDFCYVDFVTEADAAKAQAA 803
Query: 107 LNESELHGRQLKVTVKR 123
L+ LHGR L+V + +
Sbjct: 804 LDGHMLHGRALRVNISK 820
>gi|428183384|gb|EKX52242.1| hypothetical protein GUITHDRAFT_102145 [Guillardia theta CCMP2712]
Length = 533
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 50/73 (68%), Gaps = 3/73 (4%)
Query: 50 VFVGNVDYSCTPEEVQQHFQSCGTVNRVTIR--TDKF-GQPKGYAYVEFLQSEAVQEALH 106
+F+G + + T ++++QHF SC ++++IR TD+ G+P+G A++EF S A + AL
Sbjct: 359 LFLGQLPFDVTADDIKQHFASCAPHDQMSIRVLTDRVTGKPRGIAFLEFKDSTAAEAALS 418
Query: 107 LNESELHGRQLKV 119
L+ S + GR+++V
Sbjct: 419 LDHSIMRGRRIRV 431
>gi|452823974|gb|EME30980.1| poly(A) binding protein isoform 1 [Galdieria sulphuraria]
Length = 222
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 106
+R VFVGN+ Y T +++ QH S G + I T+ G+ G A VEF EA + A+
Sbjct: 42 NRRVFVGNLAYRTTLDDLIQHLGSVGKIATSQILTNNLGRSVGGAIVEFDSEEAAKRAIE 101
Query: 107 -LNESELHGRQLKVTVKRTNVPGMKQHRPRR 136
LN+SEL GR++ + R + H PRR
Sbjct: 102 TLNDSELDGRKI---IIREDREDFSLHDPRR 129
>gi|50287177|ref|XP_446018.1| hypothetical protein [Candida glabrata CBS 138]
gi|74691041|sp|Q6FUS6.1|NOP12_CANGA RecName: Full=Nucleolar protein 12
gi|49525325|emb|CAG58942.1| unnamed protein product [Candida glabrata]
Length = 396
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 8/81 (9%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALH 106
RSVFVGN+D+ E + +HF +CG++ V I D K KG+AYV+F + ++V +AL
Sbjct: 228 RSVFVGNLDFEEDEESLWKHFGACGSIEYVRIVRDPKTNMGKGFAYVQFNELQSVSKALL 287
Query: 107 LNES-------ELHGRQLKVT 120
LNE L R+L+VT
Sbjct: 288 LNEKPMISQNEHLKKRKLRVT 308
>gi|443694236|gb|ELT95429.1| hypothetical protein CAPTEDRAFT_160825 [Capitella teleta]
Length = 548
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
Query: 26 MASKQD-PAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK- 83
MAS Q P +S + EE RSVFVGN+ Y + E++++ FQ G V + D+
Sbjct: 1 MASIQKTPPPSNTSPSASEERAQRSVFVGNIPYEASEEQLKEVFQQAGPVISFRLVYDRE 60
Query: 84 FGQPKGYAYVEFLQSEAVQEAL-HLNESELHGRQLKVTV 121
G+PKGY + E+ E Q A+ +LN + +GR L+V V
Sbjct: 61 TGKPKGYGFCEYQDVETAQSAMRNLNNYDYNGRPLRVGV 99
>gi|452823975|gb|EME30981.1| poly(A) binding protein isoform 2 [Galdieria sulphuraria]
Length = 223
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 106
+R VFVGN+ Y T +++ QH S G + I T+ G+ G A VEF EA + A+
Sbjct: 43 NRRVFVGNLAYRTTLDDLIQHLGSVGKIATSQILTNNLGRSVGGAIVEFDSEEAAKRAIE 102
Query: 107 -LNESELHGRQLKVTVKRTNVPGMKQHRPRR 136
LN+SEL GR++ + R + H PRR
Sbjct: 103 TLNDSELDGRKI---IIREDREDFSLHDPRR 130
>gi|291220976|ref|XP_002730499.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 458
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 63/131 (48%), Gaps = 23/131 (17%)
Query: 5 LKEMEEEATALRQMHAKVG-NEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEE 63
LK +++ +R H +V + ASK D RSVF+GN+ Y E
Sbjct: 253 LKSLKKNGKVVRGHHIRVDVSSNASKHD--------------HQRSVFIGNLPYKIDEEI 298
Query: 64 VQQHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVK 122
V+QHF CG V V +R K G KG+ YV F +V+ AL N+ L GR KV +K
Sbjct: 299 VRQHFMQCGNVISVRLVRDGKTGIGKGFGYVLFKDISSVEFALKFNDKPLFGR--KVRIK 356
Query: 123 RT-----NVPG 128
R+ N PG
Sbjct: 357 RSFEKEKNKPG 367
>gi|430813955|emb|CCJ28747.1| unnamed protein product [Pneumocystis jirovecii]
Length = 364
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTI-RTDKFGQPKGYAYVEFLQSEAVQEALH 106
RS+F+GN+ + E++ +F CG + V I R +K KG+AYV+F E++ +AL
Sbjct: 221 RSIFIGNLSFDAQEEQLWSYFAHCGEIEFVRIVRDNKTNLGKGFAYVQFKDRESIDQALL 280
Query: 107 LNESE-LHGRQLKVTVKRTNVP 127
L++ E L GR+L+V ++ N+P
Sbjct: 281 LHDKEGLCGRKLRV-IRAKNIP 301
>gi|453084590|gb|EMF12634.1| RRM_1-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 344
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 39 LANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQ 97
+A RE+ R VF+GN+ Y + E++ F G V + DK GQPKG+ ++E+
Sbjct: 1 MAQREK-GGRVVFIGNIPYGVSEEQIMDIFGRAGQVVNFRLVYDKETGQPKGFGFLEYTD 59
Query: 98 SEAVQEAL-HLNESELHGRQLKVTVKRTN 125
++A A+ +LNES+L+GR L+V N
Sbjct: 60 TDAAASAVRNLNESDLNGRTLRVDYSNDN 88
>gi|357144688|ref|XP_003573380.1| PREDICTED: uncharacterized protein LOC100836665 isoform 2
[Brachypodium distachyon]
Length = 557
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 7/96 (7%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 106
S+++F+GN+ +S +V++ F G V V + T + G PKGYA+VEF +E ++ L
Sbjct: 291 SKTLFMGNLPFSAEFGQVKEFFAEAGEVVDVRLATHEDGHPKGYAHVEFATAEDAKKGLE 350
Query: 107 LNESELHGR--QLKVTVKRTNVPGMKQHRPRRPNPF 140
LN EL GR +L + ++R P RPR F
Sbjct: 351 LNGQELMGRAVRLDLALERGATP-----RPRDGGSF 381
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 34 AGGSSLANREEVDSRSVFVGNVDYSCTPEEV----QQHFQSCGTVNRVTIRTD-KFGQPK 88
+GGSSL SVFV D S +++ +QHF CG + RV++ D + G+ K
Sbjct: 385 SGGSSL---------SVFVKGFDSSQQEDKIRSSLEQHFSKCGEITRVSVPMDYESGESK 435
Query: 89 GYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
G AY++F + +AL L+ S+L G L V
Sbjct: 436 GIAYMDFTDESSFSKALELSGSDLGGYNLYV 466
>gi|307180328|gb|EFN68361.1| Squamous cell carcinoma antigen recognized by T-cells 3 [Camponotus
floridanus]
Length = 903
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 41 NREEVDSR-SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSE 99
N EV++ +VFV N+DY+ T +EV+ QS G + + D G+ KGY YV+ +E
Sbjct: 651 NSHEVNNNITVFVSNLDYTATEDEVRDILQSVGPITLFKMIKDYKGRSKGYCYVQLSNAE 710
Query: 100 AVQEALHLNESELHGRQLKVT 120
AV+EAL L+ + L GR + V+
Sbjct: 711 AVEEALKLDRTPLKGRPMFVS 731
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 7 EMEEEATALRQMHAKVGNEMASKQDPAAG--GSSLANREEVDSRSVFVGNVDYSCTPEEV 64
E EEA L + K S+ DP G S ++ +FV + + T EE+
Sbjct: 710 EAVEEALKLDRTPLKGRPMFVSRCDPNKGTRSSGFKFSSTLEKNKLFVKGLPPTTTKEEL 769
Query: 65 QQHFQSCGTVNRVTIRTDKFGQPKGYAYVEF 95
++ F+ G + V + T + G KG AYVE+
Sbjct: 770 EEIFKVHGDLKEVRLVTYRNGHSKGLAYVEY 800
>gi|395334547|gb|EJF66923.1| hypothetical protein DICSQDRAFT_95813 [Dichomitus squalens LYAD-421
SS1]
Length = 346
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 8/91 (8%)
Query: 50 VFVGNVDYSCTPEEVQQHFQSCG---TVNRVTIRTDKFGQP----KGYAYVEFLQSEAVQ 102
+FVGN+ Y+ T E V+QHF C TV +T + +P KG+A+VEF A+Q
Sbjct: 150 LFVGNLKYTTTKEAVEQHFSKCDPPPTVRLMTPKPSATSKPSVKSKGFAFVEFKHRNALQ 209
Query: 103 EALHLNESELHGRQLKVTVKRTNVPGMKQHR 133
+ L L++SEL GR++ V + G +HR
Sbjct: 210 QGLKLHQSELEGRKINVELT-AGGGGNSEHR 239
>gi|313228854|emb|CBY18005.1| unnamed protein product [Oikopleura dioica]
Length = 314
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 75/135 (55%), Gaps = 8/135 (5%)
Query: 1 MKIRLKEMEEEATALRQMHA----KVGNEMASKQDPAAGGSSLANR-EEVDSRSVFVGNV 55
+K +L ME E + LR+MH K+ + ++++ + + + R +E D+R+++V N+
Sbjct: 172 LKKKLAMMERETSRLREMHKLRLKKLETKQRAQEERSKRDAEIQRRQDEEDARTIYVRNL 231
Query: 56 DYSCTPEEVQQHFQSCGTVNRVTIRTD--KFGQPKGYAYVEFLQSEAVQEALHLNESELH 113
+ T ++++ HF G + R+ + D G +G+ ++ F E V+ A L+ + LH
Sbjct: 232 NPKTTEQQLRDHFSVFGAIKRIVLPQDAHAIGSNRGFTFITFAGKEPVEVACSLDGTLLH 291
Query: 114 GRQLKVTVKRTNVPG 128
R +KV V +TN+ G
Sbjct: 292 ERSIKV-VPKTNMMG 305
>gi|357168503|ref|XP_003581679.1| PREDICTED: uncharacterized protein LOC100838448 [Brachypodium
distachyon]
Length = 741
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 106
S+++FVGN+ YS E+V++ FQ V V T + G KG+A+VEF +EAV +A
Sbjct: 472 SKTLFVGNLSYSVGIEQVKEFFQEVAEVVDVRFATFEDGSSKGFAHVEFATTEAVHKARE 531
Query: 107 LNESELHGRQLKVTVKR 123
LN +L GR +++ + R
Sbjct: 532 LNGHDLMGRPVRLDLAR 548
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 47 SRSVFVGNVDYSCTPEEV----QQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAV 101
S + F+ D S +++ Q+HF SCG + RV+I D + G KG AY+EF ++
Sbjct: 572 SNTAFIRGFDASLGEDQIRSSLQKHFGSCGEITRVSIPKDYETGASKGIAYMEFSDQSSL 631
Query: 102 QEALHLNESELHGRQL 117
+A L+ S+L G L
Sbjct: 632 SKAFELSGSDLGGFSL 647
>gi|356544468|ref|XP_003540672.1| PREDICTED: uncharacterized protein LOC100779929 [Glycine max]
Length = 744
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%), Gaps = 5/78 (6%)
Query: 47 SRSVFVGNVDYSCTPEEV----QQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAV 101
S++VFV D S +E+ Q+HF SCG + RV+I D + G KG+AYV+F +++
Sbjct: 573 SQTVFVRGFDTSLGEDEIRGSLQEHFGSCGDITRVSIPKDYESGAVKGFAYVDFSDVDSM 632
Query: 102 QEALHLNESELHGRQLKV 119
+AL L+E+EL G L V
Sbjct: 633 GKALELHETELGGYTLTV 650
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 106
S+++FVGN+ +S +V+ F+ G V V TD G+ KG+ +VEF + A Q+AL
Sbjct: 473 SKTLFVGNLPFSVERADVEDFFKDAGEVVDVRFATDDTGKFKGFGHVEFATAAAAQKALG 532
Query: 107 LNESELHGRQLKVTVKR 123
LN +L R+L++ + R
Sbjct: 533 LNGQQLFNRELRLDLAR 549
>gi|50543140|ref|XP_499736.1| YALI0A03773p [Yarrowia lipolytica]
gi|49645601|emb|CAG83659.1| YALI0A03773p [Yarrowia lipolytica CLIB122]
Length = 330
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
Query: 44 EVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRT-DKFGQPKGYAYVEFLQSEAVQ 102
+ DSR +FVGN+ ++ T E +Q HF+SCG + RV + + + G+ KG+++V+F ++A +
Sbjct: 161 DTDSRVLFVGNLPFNATEEMLQDHFKSCGDIRRVRMMSFEDTGKSKGFSFVDFYDADATR 220
Query: 103 EALHLNESE-LHGRQLKV 119
+AL + L GR L++
Sbjct: 221 KALKGRLYKYLEGRTLRL 238
>gi|357144686|ref|XP_003573379.1| PREDICTED: uncharacterized protein LOC100836665 isoform 1
[Brachypodium distachyon]
Length = 606
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 7/96 (7%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 106
S+++F+GN+ +S +V++ F G V V + T + G PKGYA+VEF +E ++ L
Sbjct: 340 SKTLFMGNLPFSAEFGQVKEFFAEAGEVVDVRLATHEDGHPKGYAHVEFATAEDAKKGLE 399
Query: 107 LNESELHGR--QLKVTVKRTNVPGMKQHRPRRPNPF 140
LN EL GR +L + ++R P RPR F
Sbjct: 400 LNGQELMGRAVRLDLALERGATP-----RPRDGGSF 430
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 14/89 (15%)
Query: 34 AGGSSLANREEVDSRSVFVGNVDYSCTPEEV----QQHFQSCGTVNRVTIRTD-KFGQPK 88
+GGSSL SVFV D S +++ +QHF CG + RV++ D + G+ K
Sbjct: 434 SGGSSL---------SVFVKGFDSSQQEDKIRSSLEQHFSKCGEITRVSVPMDYESGESK 484
Query: 89 GYAYVEFLQSEAVQEALHLNESELHGRQL 117
G AY++F + +AL L+ S+L G L
Sbjct: 485 GIAYMDFTDESSFSKALELSGSDLGGYNL 513
>gi|255713116|ref|XP_002552840.1| KLTH0D02640p [Lachancea thermotolerans]
gi|238934220|emb|CAR22402.1| KLTH0D02640p [Lachancea thermotolerans CBS 6340]
Length = 462
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 46 DSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEA 104
+ RSVFVGN+D+ E + +HF+ G + V +R K KG+AYV+F + + +A
Sbjct: 295 NKRSVFVGNLDFEEAEENLWKHFEKSGEIEYVRVVRDSKTNMGKGFAYVQFRDFQDINKA 354
Query: 105 LHLNESELH--GRQLKVT 120
L LN+ +L+ GR+L+VT
Sbjct: 355 LLLNDQKLNGTGRKLRVT 372
>gi|294933049|ref|XP_002780572.1| Heterogeneous nuclear ribonucleoprotein D0, putative [Perkinsus
marinus ATCC 50983]
gi|239890506|gb|EER12367.1| Heterogeneous nuclear ribonucleoprotein D0, putative [Perkinsus
marinus ATCC 50983]
Length = 540
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL 105
S SVFVGN+ +S T E + + F CG++ R + TD+ G P+G+AY++F ++ ++A
Sbjct: 400 SASVFVGNLPWSMTQEWLSEVFGDCGSITRCFMPTDRETGNPRGFAYIDFDTEDSAEKAT 459
Query: 106 HLNESELHGRQLKV 119
L+ ++L GRQ++V
Sbjct: 460 KLSGTDLEGRQIRV 473
Score = 58.9 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 36/106 (33%), Positives = 66/106 (62%), Gaps = 7/106 (6%)
Query: 21 KVGNEMASKQD--PAAGGSSLAN---REEVD-SRSVFVGNVDYSCTPEEVQQHFQSCGTV 74
+ +E +++D PA + L + +E V+ S+SVFVGN+ +S T E ++Q F CG +
Sbjct: 261 RAASEATTEEDEAPAQKKAKLNDGSAQESVERSKSVFVGNLPFSMTKEWLEQIFSWCGDI 320
Query: 75 NRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
RV++ TD + G+ KG+A+++F ++ ++A+ N + GR L+V
Sbjct: 321 ERVSLPTDWESGKIKGFAFLDFADEDSAEKAVGKNGEDCEGRDLRV 366
>gi|428176376|gb|EKX45261.1| hypothetical protein GUITHDRAFT_87179 [Guillardia theta CCMP2712]
Length = 137
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 34 AGGSSLANREEVD-SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAY 92
AGG E D R VFVGN+ +S E+++ HF CG V R + T++ G+ +G
Sbjct: 45 AGGLENGEGTEGDEDRKVFVGNLSWSTNSEQLKNHFDVCGEVVRADVFTERSGRSRGCGI 104
Query: 93 VEFLQSEAVQEA-LHLNESELHGRQLKVTVKR 123
VEF + A + +N SEL GR + V R
Sbjct: 105 VEFTSPDGAHNAMMMMNNSELDGRSIFVREDR 136
>gi|427782001|gb|JAA56452.1| Putative rna-binding protein hnrnp-m [Rhipicephalus pulchellus]
Length = 482
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQS-EAVQEAL 105
S VFV N+DY T +++Q+ F+ G V+ V +RTDK G KG+ VEF EAVQ
Sbjct: 196 SNRVFVANLDYKVTAKKLQEVFRIAGRVSNVDLRTDKEGNSKGHGIVEFEHPIEAVQAIS 255
Query: 106 HLNESELHGRQLKVTVKRTN 125
LN +L+ R + V + + N
Sbjct: 256 MLNGQKLYNRAMSVRMDKYN 275
>gi|405973847|gb|EKC38537.1| Serine/threonine-protein kinase PAK 6 [Crassostrea gigas]
Length = 1486
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALH 106
RS+FVGN+ E+V+ HF+SCG + V IR K G KG YV F ++V A+
Sbjct: 376 RSIFVGNLPLDIKEEDVRSHFESCGKIRNVRVIRDSKSGVGKGICYVTFKSKDSVGLAMK 435
Query: 107 LNESELHGRQLKV 119
L +EL GR+ ++
Sbjct: 436 LKGTELSGRKARI 448
>gi|167527450|ref|XP_001748057.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773475|gb|EDQ87114.1| predicted protein [Monosiga brevicollis MX1]
Length = 459
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 42/70 (60%)
Query: 50 VFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNE 109
VF+GN+ Y T EEV QHF+SCG ++ QP+G A+ EF + ++AL +
Sbjct: 340 VFIGNLSYDTTAEEVTQHFKSCGPCVVRLLKKKGTDQPRGCAFAEFETASGHEKALSYHL 399
Query: 110 SELHGRQLKV 119
S+L GR++ V
Sbjct: 400 SKLKGRKINV 409
>gi|406880229|gb|EKD28634.1| RNA-binding protein [uncultured bacterium]
Length = 95
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 55/92 (59%), Gaps = 6/92 (6%)
Query: 50 VFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL-HL 107
++VGN+ Y T E+V+Q F+ G V+ V + TD+ G+PKG+A+VE +A+ L
Sbjct: 3 LYVGNLSYDATEEDVRQIFEGVGPVSSVNMITDRDTGRPKGFAFVEMENKNDGDKAISEL 62
Query: 108 NESELHGRQLKVTVKRTNVPGMKQHR-PRRPN 138
N+ ++ GR +KV+V R P Q PRR N
Sbjct: 63 NDVDVKGRSIKVSVAR---PKTAQSSGPRRFN 91
>gi|302340505|ref|YP_003805711.1| RNP-1 like RNA-binding protein [Spirochaeta smaragdinae DSM 11293]
gi|301637690|gb|ADK83117.1| RNP-1 like RNA-binding protein [Spirochaeta smaragdinae DSM 11293]
Length = 88
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 54/91 (59%), Gaps = 7/91 (7%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEAL 105
++ ++VGN++YS E +Q F G VN V I TD++ GQ KG+ +VE + +A + A+
Sbjct: 2 AKKIYVGNLNYSTREESLQDLFGQYGQVNSVNIITDRYTGQSKGFGFVEMEEMDAAEAAI 61
Query: 106 H-LNESELHGRQLKVTVKRTNVPGMKQHRPR 135
L+ + L GR+L+V N ++ RPR
Sbjct: 62 SALDGTSLDGRELRV-----NEAKERERRPR 87
>gi|153874940|ref|ZP_02002958.1| RNA-binding protein [Beggiatoa sp. PS]
gi|152068596|gb|EDN67042.1| RNA-binding protein [Beggiatoa sp. PS]
Length = 89
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 54/90 (60%), Gaps = 5/90 (5%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHL 107
+++VGN+ YS T EE+++ F G ++ V + TDK+ GQ KG+A+VE ++ + A+
Sbjct: 2 NIYVGNLSYSMTEEELKEIFTEYGEISTVNLITDKYTGQSKGFAFVEMVKQADAETAIK- 60
Query: 108 NESELHGRQLKVTVKRTNVPGMKQHRPRRP 137
EL+G+ +K + N + +PRRP
Sbjct: 61 ---ELNGKTIKGMSIKVNQARPRGEKPRRP 87
>gi|224047848|ref|XP_002191823.1| PREDICTED: RNA-binding protein 34 [Taeniopygia guttata]
Length = 428
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 64/118 (54%), Gaps = 6/118 (5%)
Query: 3 IRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPE 62
+ KE + AL++ ++ + + D A+ S N+ RSVFVGN+ Y +
Sbjct: 236 VVFKEECDAQNALKENGTEIASGFHIRVDTASKTSLHDNK-----RSVFVGNLSYDIRDD 290
Query: 63 EVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
V++HFQ CG + V + D+ G KG+ YV F ++AV AL LN S L GR+++V
Sbjct: 291 AVREHFQVCGDIVGVRVVRDRRTGLGKGFGYVLFENTDAVHLALKLNNSVLMGRKIRV 348
>gi|219111803|ref|XP_002177653.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410538|gb|EEC50467.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 76
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 50/72 (69%), Gaps = 2/72 (2%)
Query: 50 VFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEAL-HL 107
VFVGN+ ++ T E++QQ F G V V + TD G+P+G+A+VEF ++A A+ ++
Sbjct: 1 VFVGNLAFNTTEEQLQQVFSDIGRVIHVRLVTDVDTGKPRGFAFVEFSDAQAALSAIRNM 60
Query: 108 NESELHGRQLKV 119
N+ EL+GR+++V
Sbjct: 61 NDYELNGRRIRV 72
>gi|327405345|ref|YP_004346183.1| RNP-1 like RNA-binding protein [Fluviicola taffensis DSM 16823]
gi|327320853|gb|AEA45345.1| RNP-1 like RNA-binding protein [Fluviicola taffensis DSM 16823]
Length = 224
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFL-QSEAVQEALH 106
S+FV +D++ T E+++ F+ G VNRVTI D+ G+P+G+A+VE +SEA +
Sbjct: 3 SIFVAKLDFNTTEEQLKSLFEDYGKVNRVTIAKDRETGKPRGFAFVEMADESEADKAIEA 62
Query: 107 LNESELHGRQLKVTVKRTNVPGMK 130
L++S ++GR + V G K
Sbjct: 63 LDDSSVNGRNIAVKKADDRASGGK 86
>gi|390363636|ref|XP_781943.2| PREDICTED: uncharacterized protein LOC576551 [Strongylocentrotus
purpuratus]
Length = 394
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 6/114 (5%)
Query: 7 EMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQ 66
E E+ A A + K+ N+ + D A N++ RS+FVGN+ ++ E V+
Sbjct: 218 EEEQCARAALASNGKIVNKHHMRVDIAGN-----NKKHDMKRSLFVGNLAFNIDDEAVRN 272
Query: 67 HFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
HF+ GTV V + DK G KG+ YV F S +VQ AL ++ ++L+GR L+V
Sbjct: 273 HFEEFGTVEGVRLIRDKATGVGKGFGYVLFEDSSSVQFALKMDGTKLNGRPLRV 326
>gi|167531199|ref|XP_001748165.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773285|gb|EDQ86926.1| predicted protein [Monosiga brevicollis MX1]
Length = 454
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTI-RTDKFGQPKGYAYVEFLQSEAVQEALH 106
RS+FVGN+ + + EE+ F SCGTV V I R K+ KG+AYV F +E+V AL
Sbjct: 222 RSIFVGNLPFDASEEELHGAFDSCGTVEGVRIVRDKKYAIGKGFAYVLFELAESVGLAL- 280
Query: 107 LNESELHGRQLKVT 120
+ E ++ GR L+V+
Sbjct: 281 MKECQVRGRTLRVS 294
>gi|300175323|emb|CBK20634.2| unnamed protein product [Blastocystis hominis]
Length = 385
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 44 EVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQE 103
+V R+VFV N+ ++ + E+VQ+ FQ G + VTI + G+ +G+ YVEF EA +
Sbjct: 249 DVQHRTVFVNNLSFAASEEDVQERFQQYGEIVEVTIVRNNHGKSRGFGYVEFSTEEAAES 308
Query: 104 ALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPN 138
AL N L R+++V + +VP ++ ++ N
Sbjct: 309 ALVENGKMLKSRKMEV---KKSVPQNERKTEKQEN 340
>gi|189347593|ref|YP_001944122.1| RNP-1 like RNA-binding protein [Chlorobium limicola DSM 245]
gi|189341740|gb|ACD91143.1| RNP-1 like RNA-binding protein [Chlorobium limicola DSM 245]
Length = 90
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEAL-H 106
++++GN+DY+ T ++++ F G V+ ++ TDKF G+ KG+ +VE + EA+
Sbjct: 2 NIYIGNLDYNVTESDLRETFGEFGEVSNASVITDKFTGRSKGFGFVEMPNNAEASEAISS 61
Query: 107 LNESELHGRQLKVT 120
LN+S+L+GR +KV
Sbjct: 62 LNDSDLNGRTIKVN 75
>gi|294924689|ref|XP_002778856.1| Embryonic polyadenylate-binding protein 2-B, putative [Perkinsus
marinus ATCC 50983]
gi|239887665|gb|EER10651.1| Embryonic polyadenylate-binding protein 2-B, putative [Perkinsus
marinus ATCC 50983]
Length = 94
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 81 TDKF-GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPG 128
DK+ G PKG+AY+EF AVQ AL LN++ GRQLKV KRTN+PG
Sbjct: 2 VDKYSGHPKGFAYIEFGDEAAVQNALLLNDTMFRGRQLKVLQKRTNLPG 50
>gi|110597824|ref|ZP_01386107.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
ferrooxidans DSM 13031]
gi|110340549|gb|EAT59032.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
ferrooxidans DSM 13031]
Length = 90
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFL-QSEAVQEALH 106
++++GN+DYS T ++++ F G V+ ++ DKF G+ KG+ +VE +EA
Sbjct: 2 NIYIGNLDYSVTEADLRETFGEFGEVSSASVINDKFTGRSKGFGFVEMANDAEAASAIAD 61
Query: 107 LNESELHGRQLKVT 120
LN+S+L+GR +KV
Sbjct: 62 LNDSDLNGRTIKVN 75
>gi|342874383|gb|EGU76397.1| hypothetical protein FOXB_13075 [Fusarium oxysporum Fo5176]
Length = 293
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 10/117 (8%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEAL 105
SR VFVGN+ Y T E++ F S G V R + D + G+PKG+ + ++ +++ A+
Sbjct: 7 SRVVFVGNIPYGLTEEQITDIFSSAGKVERFRLVYDPETGRPKGFGFADYPDTDSASSAV 66
Query: 106 -HLNESELHGRQLKVTVKR-------TNVPGMKQHRPRRPNPFM-VYQSRGAIIPPF 153
+LN+ E+ GR+L+V PGM + P N + Y ++ + +PP
Sbjct: 67 RNLNDFEIMGRKLRVDFSNDQKSSDDDKDPGMSNYNPHVSNGAVPSYSAQPSTLPPL 123
>gi|109900313|ref|YP_663568.1| RNA-binding region RNP-1 [Pseudoalteromonas atlantica T6c]
gi|109702594|gb|ABG42514.1| RNA-binding region RNP-1 [Pseudoalteromonas atlantica T6c]
Length = 151
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 34 AGGSSLANR-EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKGYA 91
+G SS+A + +E +S++++VGN+ Y + VQQHF+ G V+ V + D + G+ KGY
Sbjct: 55 SGTSSVAQQADEENSKTLYVGNLPYRANEQAVQQHFELQGQVHSVRLMKDRRTGKRKGYG 114
Query: 92 YVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNV 126
+VE + A + +LN+SE R LKV + + V
Sbjct: 115 FVEMTAAGAEKAIQNLNDSEFQERTLKVRMAKDKV 149
>gi|195390115|ref|XP_002053714.1| GJ23196 [Drosophila virilis]
gi|194151800|gb|EDW67234.1| GJ23196 [Drosophila virilis]
Length = 439
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Query: 33 AAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAY 92
AAG +N +V R+VFVGN+ Y+ + +++++ F SCG ++ + D KG AY
Sbjct: 252 AAGNDQASNDADV-KRTVFVGNLKYTASEQKLREIFSSCGEIDYIRCLQDGDKGCKGVAY 310
Query: 93 VEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHR 133
V F + +AV AL LNE+ L R + V G KQ R
Sbjct: 311 VCFQKPDAVGLALELNETLLDDRPIHVERYSVKKLGAKQAR 351
>gi|398407175|ref|XP_003855053.1| hypothetical protein MYCGRDRAFT_108180 [Zymoseptoria tritici
IPO323]
gi|339474937|gb|EGP90029.1| hypothetical protein MYCGRDRAFT_108180 [Zymoseptoria tritici
IPO323]
Length = 566
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFG-QPKGYAYVEFLQSEAVQEALHL 107
+ +GN+DY+ T ++++ C +V V I DK +PKG+ YVEF E +++AL
Sbjct: 102 TAHLGNLDYNVTSVDIEEFLSDC-SVTTVRIMEDKVDRKPKGFGYVEFGSPEGLRQALTK 160
Query: 108 NESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAI 149
+ES GR +K++V + P K RP + F + RG +
Sbjct: 161 SESSFMGRNIKISV--ADPP--KNDRPEQTRDFSDWSRRGPL 198
>gi|389751225|gb|EIM92298.1| hypothetical protein STEHIDRAFT_89201 [Stereum hirsutum FP-91666
SS1]
Length = 340
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 12/117 (10%)
Query: 17 QMHAKVGNEMASKQDPAAGGSSLANREEVDSRS-----VFVGNVDYSCTPEEVQQHFQSC 71
++ K G + A+ A GS +E+ ++ +FVGN+ Y+ + E +QQHF C
Sbjct: 121 EVEGKEGKKAANADGEGAAGSEDRTKEDAKDKTKQRFILFVGNLKYTTSKEAIQQHFAIC 180
Query: 72 G---TVNRVTIRTDKFGQP----KGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 121
T+ ++ + + G P KG A++EF A+Q+AL L+ SEL R++ V +
Sbjct: 181 DPPPTIRLLSPKQTRPGAPTAKSKGCAFLEFTSRNALQQALKLHHSELESRKINVEL 237
>gi|427419443|ref|ZP_18909626.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
gi|425762156|gb|EKV03009.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
Length = 86
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 59/91 (64%), Gaps = 9/91 (9%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL-- 105
S++VGN+ Y+ + E++Q+ F GTV RVT+ D+ G+P+G+A+VE + ++A ++A
Sbjct: 2 SIYVGNIAYTVSQEDIQEVFADYGTVKRVTVPMDRETGRPRGFAFVE-MSADAEEDAAIE 60
Query: 106 HLNESELHGRQLKVTVKRTNVPGMKQHRPRR 136
L+ +E GR+++V R ++ RP+R
Sbjct: 61 ALDGAEWLGREIRVNKARP-----REERPKR 86
>gi|237836905|ref|XP_002367750.1| U1 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|211965414|gb|EEB00610.1| U1 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|221482025|gb|EEE20391.1| U1 small nuclear ribonucleoprotein 70 kD, putative [Toxoplasma
gondii GT1]
gi|221505100|gb|EEE30754.1| RNA-binding protein, putative [Toxoplasma gondii VEG]
Length = 274
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEAL-H 106
R++FVG + Y T +++++ F+ G++ RV + D+ G+P+GY ++EF ++EA +
Sbjct: 98 RTLFVGGISYDTTEKKLKREFEQYGSIKRVRLIYDRNGKPRGYGFIEFENDRDMKEAYKN 157
Query: 107 LNESELHGRQLKVTVKRT-NVPGMKQHR 133
+ ++ GR++ V V+R VPG R
Sbjct: 158 ADGKKIDGRRVLVDVERARTVPGWLPRR 185
>gi|170091988|ref|XP_001877216.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648709|gb|EDR12952.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 218
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 50 VFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLN 108
VFVG + ++ + + Q F CG + T++ D+ G+ +G+ YV F +AV++AL +N
Sbjct: 1 VFVGQLSWAVDNDRLAQEFADCGEIESATVQMDRNTGKSRGFGYVHFTTPDAVEKALQMN 60
Query: 109 ESELHGRQLKVTVKRTNVPGMKQHRPRRPNPF 140
E+ GR +K V R+ Q R +R F
Sbjct: 61 GQEIDGRAIK--VDRSLPRDKSQVREKRAQAF 90
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL 105
S ++FVGN+ + T + V F G V V + TD+ G+PKG+ YVEF + ++A
Sbjct: 98 SSTLFVGNLSFGVTEDTVWSFFNDYG-VKSVRLPTDRETGRPKGFGYVEFEDIDGAKKAF 156
Query: 106 H-LNESELHGRQLKV 119
N SE+ GR +++
Sbjct: 157 EAANGSEIEGRSIRL 171
>gi|186682695|ref|YP_001865891.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
gi|186465147|gb|ACC80948.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
Length = 104
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH- 106
S++VGN+ Y T E+++Q F GTV+RV + TD+ G+P+G+A+VE Q A+
Sbjct: 2 SIYVGNLSYQVTEEDLKQAFAEYGTVSRVQLPTDRETGRPRGFAFVEMESDTQEQAAIDA 61
Query: 107 LNESELHGRQLKV 119
L+ +E GR LKV
Sbjct: 62 LDGAEWMGRDLKV 74
>gi|384499302|gb|EIE89793.1| hypothetical protein RO3G_14504 [Rhizopus delemar RA 99-880]
Length = 292
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFG-QPKGYAYVEFLQSEAVQEALHL 107
+VFVG +++ T EE++ HF CG V+ V +R G + +G+A+++F +E Q A+ L
Sbjct: 82 TVFVGQLNFDATAEEIRTHFGQCGPVSDVRLRMHPNGVKSRGFAHIDFTSAEGKQAAMAL 141
Query: 108 NESELHGRQLKV 119
+ +E GR ++V
Sbjct: 142 DGTEFMGRTIRV 153
Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
Query: 50 VFVGNVDYSCTPEEVQQHFQSCGTVN---RVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 106
VFV N+ Y + ++Q F+ GT+ + I D G+ +G AY++F + + A+
Sbjct: 175 VFVANLSYDTDEDSLKQAFEKFGTIVGEIGLPISRDT-GRIRGIAYIQFETEDEAEAAVK 233
Query: 107 -LNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGA 148
+N L GR ++ N RP R + RGA
Sbjct: 234 GMNGVYLDGRPIRTDFSGDNDRNRLGERPARQRFADRFAGRGA 276
>gi|156839965|ref|XP_001643668.1| hypothetical protein Kpol_1040p23 [Vanderwaltozyma polyspora DSM
70294]
gi|156114288|gb|EDO15810.1| hypothetical protein Kpol_1040p23 [Vanderwaltozyma polyspora DSM
70294]
Length = 467
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 46 DSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEA 104
+ RS+FVGN+D+ E + HF+SCG + V IR K KG+AY++F ++V +A
Sbjct: 293 NKRSIFVGNMDFEQDEETLWSHFESCGEIEYVRIIRDSKTNLGKGFAYIQFKDLQSVNKA 352
Query: 105 LHLNESELHG----RQLKVT 120
L LN+ + R+L+V+
Sbjct: 353 LLLNDKKFDNTKTTRKLRVS 372
>gi|410626020|ref|ZP_11336790.1| RNA-binding protein [Glaciecola mesophila KMM 241]
gi|410154640|dbj|GAC23559.1| RNA-binding protein [Glaciecola mesophila KMM 241]
Length = 151
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 34 AGGSSLANR-EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKGYA 91
+G SS+A + +E +S++++VGN+ Y + VQQHF+ G V+ V + D + G+ KGY
Sbjct: 55 SGTSSVAQQADEENSKTLYVGNLPYRANEQAVQQHFELQGQVHSVRLMKDRRTGKRKGYG 114
Query: 92 YVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNV 126
+VE + A + +LN+SE R LKV + + V
Sbjct: 115 FVEMTAAGAEKAIQNLNDSEFQERTLKVRMAKDKV 149
>gi|407918628|gb|EKG11897.1| hypothetical protein MPH_10939 [Macrophomina phaseolina MS6]
Length = 519
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEAL 105
S ++FVGN+ + TP+ V + FQ GT+ RV++ T + G PKG+ YV F E Q A
Sbjct: 370 SDTLFVGNLSFDATPDSVTEIFQEYGTITRVSLPTKPEDGMPKGFGYVGFSSVEEAQGAF 429
Query: 106 H-LNESELHGRQLKV 119
L +EL+GR +++
Sbjct: 430 EALQGAELNGRSMRL 444
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 41 NREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSE 99
N + S ++FVGN+ ++ E + + F+ G V I TD+ G+ KG+ YVEF E
Sbjct: 260 NGDAQGSPNLFVGNLSWNVDEEWLGREFEEFGP-KAVRIVTDRATGRSKGFGYVEFETVE 318
Query: 100 AVQEALHLNE-SELHGRQLKV 119
A AL+ + ++L R L +
Sbjct: 319 AATAALNAKKGTDLDNRPLNL 339
>gi|119492303|ref|ZP_01623650.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
gi|119453188|gb|EAW34355.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
Length = 101
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 51/78 (65%), Gaps = 4/78 (5%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL-- 105
S++VGN+ Y T E+++ F GTV RV+I TD+ G+P+G+A+VE +Q E+ ++A
Sbjct: 2 SIYVGNLSYEVTEEDLKSVFAEYGTVQRVSIPTDRETGRPRGFAFVE-MQEESKEDAAIE 60
Query: 106 HLNESELHGRQLKVTVKR 123
L+ +E GR LKV R
Sbjct: 61 ALDGAEWMGRDLKVNKAR 78
>gi|195112762|ref|XP_002000941.1| GI10515 [Drosophila mojavensis]
gi|193917535|gb|EDW16402.1| GI10515 [Drosophila mojavensis]
Length = 433
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 53/98 (54%)
Query: 36 GSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEF 95
G+ A+ E R+VF+GN+ YS + E++++ F SCG ++ + D KG AYV F
Sbjct: 251 GNGQASSEADVKRTVFIGNLKYSASEEKLREIFSSCGEIDYIRCLQDGEKGCKGVAYVCF 310
Query: 96 LQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHR 133
+ +AV AL LNE+ L R + V G KQ R
Sbjct: 311 QKPDAVGLALELNETLLDDRPIHVERYSVKKLGAKQAR 348
>gi|328766510|gb|EGF76564.1| hypothetical protein BATDEDRAFT_36238 [Batrachochytrium
dendrobatidis JAM81]
Length = 417
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALH 106
+S+F+GN+ + + E + F CG + V IR KG+ YV+F + +V AL
Sbjct: 280 KSIFIGNLLFDISEEALWSFFSDCGDITNVRVIRDRNTNVGKGFGYVQFAERSSVSLALK 339
Query: 107 LNESELHGRQLKVT 120
LN+++L GRQ++++
Sbjct: 340 LNDTDLQGRQVRIS 353
>gi|341882512|gb|EGT38447.1| hypothetical protein CAEBREN_12601 [Caenorhabditis brenneri]
Length = 84
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH- 106
SV+VGNV Y T E++ +F + G VN V I D+ G+P+G+A+VE+ Q A+
Sbjct: 7 SVYVGNVPYQGTEEDIGNYFSTVGVVNNVRIVYDRETGRPRGFAFVEYTDESGAQRAVQE 66
Query: 107 LNESELHGRQLKVT 120
LN + +GR L+V
Sbjct: 67 LNGTSFNGRNLRVN 80
>gi|345870843|ref|ZP_08822793.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
gi|343921312|gb|EGV32033.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
Length = 90
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 12/93 (12%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALH- 106
+++VGN+ YS T E+++ F + G ++ ++ TDKF G KG+ +VE + A+
Sbjct: 2 NIYVGNLAYSVTEEDLRAAFSTYGEISSASLITDKFTGNSKGFGFVEMSNNAEADAAIKG 61
Query: 107 LNESELHGRQLKVTVKRTNVPGMKQHRPRRPNP 139
LNE+ L GR +KV + +PR P P
Sbjct: 62 LNETPLKGRNMKVN----------EAKPRSPRP 84
>gi|366987885|ref|XP_003673709.1| hypothetical protein NCAS_0A07700 [Naumovozyma castellii CBS 4309]
gi|342299572|emb|CCC67328.1| hypothetical protein NCAS_0A07700 [Naumovozyma castellii CBS 4309]
Length = 127
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 55/100 (55%), Gaps = 13/100 (13%)
Query: 44 EVDSRSVFVGNVDYSCTPEEVQQHFQS--CG-TVNRVTIRTDKFGQPKG--------YAY 92
E+DSRSVF+ + TP E++ +F + CG + R+T+ ++ + KG AY
Sbjct: 28 EIDSRSVFIKGLHQDITPNEIESYFNTIGCGDAILRITVFDER--RKKGRKNKNVTLCAY 85
Query: 93 VEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQH 132
VEF E+ AL LNE G L+V KRTN+P K+H
Sbjct: 86 VEFQSLESHTRALELNECVFDGGMLRVFKKRTNLPASKRH 125
>gi|66576254|gb|AAY51685.1| RNA-binding protein [Chlorobium tepidum TLS]
Length = 90
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEAL-H 106
++++GN+DY+ T ++ F GTV++ + DKF G+ KG+ +VE EA+
Sbjct: 2 NIYIGNLDYNVTEADLSGAFGEFGTVSKANVIIDKFTGRSKGFGFVEMPDDAEANEAISQ 61
Query: 107 LNESELHGRQLKVT 120
LNES L+GR+++V
Sbjct: 62 LNESSLNGRKIRVN 75
>gi|410923104|ref|XP_003975022.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Takifugu rubripes]
Length = 933
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 4/107 (3%)
Query: 45 VDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFL-QSEAVQE 103
++ + +F+ + +SCT +++++ S GT+ V + T + G+PKG AYVEF ++ A Q
Sbjct: 771 IEKQKIFISGLPFSCTKKQLEEVCSSYGTIRDVRLVTYRSGKPKGLAYVEFAEETHASQA 830
Query: 104 ALHLNESELHGRQLKVTVK---RTNVPGMKQHRPRRPNPFMVYQSRG 147
L ++ + + G + V + R N+ RP P P VY +RG
Sbjct: 831 VLKMDGTVIDGNTISVAISNPPRRNMDKPGSGRPLDPIPRQVYGARG 877
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 46 DSRSVFVGNVDYSCT-PE-EVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQE 103
D SVF+ N+ Y+ PE +++ F+ CG ++++ G KGY Y++F +V E
Sbjct: 675 DDNSVFISNLAYTLEEPEAKLRTMFEPCGPISQIRPVFSTKGTFKGYCYIQFESVVSVSE 734
Query: 104 ALHLNESELHGRQLKVT--VKRTNVPGMK 130
AL L+ E+ R + V+ V + P K
Sbjct: 735 ALKLDRQEMENRPMFVSPCVDKNKNPDFK 763
>gi|403218189|emb|CCK72680.1| hypothetical protein KNAG_0L00570 [Kazachstania naganishii CBS
8797]
Length = 431
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTI-RTDKFGQPKGYAYVEFLQSEAVQEALH 106
RSVF+GN+D+ E + +HF +CG + V I R K KG+AYV+F Q E V +AL
Sbjct: 254 RSVFIGNLDFEEDEETLWKHFATCGPIEYVRIVRDSKTNVGKGFAYVQFKQLETVSKALL 313
Query: 107 LNE 109
LN+
Sbjct: 314 LND 316
>gi|1279563|emb|CAA61298.1| nuM1 [Medicago sativa]
Length = 635
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%)
Query: 43 EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQ 102
E S+++FVGN+ + +++ FQ C V V + +D G KG+ +VEF +EA Q
Sbjct: 371 ETSGSKTLFVGNLSFDVKRSDIENFFQGCVEVVDVRLASDGDGVFKGFGHVEFATAEAAQ 430
Query: 103 EALHLNESELHGRQLKVTVKR 123
AL +N EL R L++ + R
Sbjct: 431 SALEMNGQELLHRALRLDLAR 451
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 49/79 (62%), Gaps = 6/79 (7%)
Query: 47 SRSVFVGNVDYSCTPEEVQ----QHFQ-SCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEA 100
S++VFV D + +E++ +HF +CG RV+I D + G KG+AY++F S++
Sbjct: 474 SQTVFVRGFDKNLGEDEIRAKLMEHFGGTCGEPTRVSIPKDYESGYSKGFAYMDFKDSDS 533
Query: 101 VQEALHLNESELHGRQLKV 119
+AL L+ESEL G QL V
Sbjct: 534 FSKALELHESELDGYQLSV 552
>gi|403417997|emb|CCM04697.1| predicted protein [Fibroporia radiculosa]
Length = 480
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLN 108
+ F+GN+ + T E++ F + T+ V I D+ +PKG+ Y+EF ++++EAL+
Sbjct: 80 TAFIGNLAFDLTETELEDFFNAA-TIKSVKIIRDRDDKPKGFGYIEFTDLDSLKEALNKT 138
Query: 109 ESELHGRQLKVTV 121
S L GR ++V+V
Sbjct: 139 NSNLAGRAIRVSV 151
>gi|260830184|ref|XP_002610041.1| hypothetical protein BRAFLDRAFT_129224 [Branchiostoma floridae]
gi|229295404|gb|EEN66051.1| hypothetical protein BRAFLDRAFT_129224 [Branchiostoma floridae]
Length = 542
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALHL 107
S+FVGN+ + + V +HF CG V V IR K G KG+ YV F S +V A+ L
Sbjct: 389 SIFVGNLPFDVEDDSVYEHFSQCGEVEGVRIIRDSKSGLGKGFGYVLFQDSASVGLAIRL 448
Query: 108 NESELHGRQLKV 119
NE GR+++V
Sbjct: 449 NEKTFSGRKIRV 460
>gi|254416097|ref|ZP_05029852.1| RNA-binding protein, putative [Coleofasciculus chthonoplastes PCC
7420]
gi|196177030|gb|EDX72039.1| RNA-binding protein, putative [Coleofasciculus chthonoplastes PCC
7420]
Length = 95
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEF-LQSEAVQEALH 106
S++VGN+DYS T E++ + F GTV RV + TD+ G+ +G+ +VE + E
Sbjct: 2 SIYVGNLDYSVTSEDLSEVFAEYGTVKRVHLPTDRETGRLRGFGFVEMGTEDEEASAISE 61
Query: 107 LNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPF 140
LN +E GR+LKV R K RR N F
Sbjct: 62 LNGAEWMGRELKVNQARPREDRPKSGGGRRNNRF 95
>gi|17508567|ref|NP_493029.1| Protein R06C1.4 [Caenorhabditis elegans]
gi|3878851|emb|CAB03222.1| Protein R06C1.4 [Caenorhabditis elegans]
Length = 84
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL-H 106
SV+VGNV Y T EE+ +F + G VN V I D+ G+P+G+A+VEF + Q A+
Sbjct: 7 SVYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQ 66
Query: 107 LNESELHGRQLKVT 120
LN +GR L+V
Sbjct: 67 LNGVAFNGRNLRVN 80
>gi|324507077|gb|ADY43007.1| RNA-binding protein 34 [Ascaris suum]
Length = 376
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Query: 38 SLANREEVDS-RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEF 95
S A++ DS ++VF+GNV + +++ HF+ CG V+ V I D+ G KG A+V F
Sbjct: 218 SCASKRNYDSQKTVFIGNVPFGTQEDDLCAHFEKCGDVDFVRIVRDRATGIGKGIAFVAF 277
Query: 96 LQSEAVQEALHLNESELHGRQLKVT 120
++ + AL ++ S+ GRQL+VT
Sbjct: 278 KETAVIPIALKMDGSDFGGRQLRVT 302
Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 18/90 (20%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIR---TDKFGQPKGYA------------- 91
R++FVGN S T + +++ F GT+ V +R +D K A
Sbjct: 127 RTIFVGNAPTSATRKSIKKLFSKYGTIESVRLRSVVSDNAKLSKKIAVLKNDLSPKMHSL 186
Query: 92 --YVEFLQSEAVQEALHLNESELHGRQLKV 119
YV+F+ +++V+ AL +N +L +L+V
Sbjct: 187 HFYVKFINADSVKAALDMNGEKLDDHRLRV 216
>gi|189203851|ref|XP_001938261.1| nuclear localization sequence-binding protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187985360|gb|EDU50848.1| nuclear localization sequence-binding protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 475
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 9/120 (7%)
Query: 6 KEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANR----EEVDSRSVFVGNVDYSCTP 61
KEM E RQ++ A P A G + AN+ S ++F+GNV + C+
Sbjct: 280 KEMHEYELDGRQLNVDFSTPRAK---PDANGGARANKYGDKRSPPSNTLFLGNVSFECSN 336
Query: 62 EEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH-LNESELHGRQLKV 119
E +Q+ F G++ RV++ TD+ G KG+ YV+F + AL LN ++ GR +++
Sbjct: 337 ESIQEVFAEYGSITRVSLPTDRDTGALKGFGYVDFSSQQEATAALEALNGQDIGGRAIRI 396
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEF---LQSEAVQE 103
+++FVGN+ ++ + +++ F+ G + + TD+ G+ KG+ YVEF + Q+
Sbjct: 221 KNLFVGNMSWNIDEDWLRREFEGFGEIVGCRVITDRETGRAKGFGYVEFANAADAAKAQK 280
Query: 104 ALHLNESELHGRQLKV 119
+H E EL GRQL V
Sbjct: 281 EMH--EYELDGRQLNV 294
>gi|443919574|gb|ELU39701.1| RNA recognition motif domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 716
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 67/130 (51%), Gaps = 14/130 (10%)
Query: 14 ALRQMHAKVGNEMASKQDPAAGGSSLA--NREEVDSRSVFVGNVDYSCTPEEVQQHFQSC 71
A++ A N ++PA + A + E +S +VFVG + ++ + + Q FQ C
Sbjct: 74 AMKDAPAAGANGKRKAEEPAQTPAKKAKTDTEAGESNTVFVGRLSWNVDNDWLAQEFQGC 133
Query: 72 GTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL-HLNESELHGRQLKVTVKRTNVPGM 129
GTV ++ D+ G+ +G+AYVEF Q+A+ +N ++ GR++ V +
Sbjct: 134 GTVVAARVQMDRNSGKSRGFAYVEFSSPAEAQKAVEEMNGKQIDGREVNVDIS------- 186
Query: 130 KQHRPRRPNP 139
+PR+PNP
Sbjct: 187 ---QPRQPNP 193
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 31 DPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKG 89
+P + E S ++FVGN+ ++ T + + F G V V + TD+ G+PKG
Sbjct: 192 NPEKRAQVFGDSESQPSTTLFVGNLSWNTTEDGLWTAFGEFGDVTHVRLPTDQESGKPKG 251
Query: 90 YAYVEFLQSEAVQEALH-LNESELHGRQLKV 119
+ YVEF E +A + +L GR L++
Sbjct: 252 FGYVEFGDQEGATKAYEAMKGKDLDGRTLRL 282
>gi|159155220|gb|AAI54771.1| Rbm34 protein [Danio rerio]
Length = 410
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 11/97 (11%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH 106
RS+FVGN+ Y + +Q HFQ CG + V + D+ G KG+ YV F ++V AL
Sbjct: 251 RSIFVGNLPYDISELPLQNHFQECGNIEAVRLVRDRDSGMGKGFGYVLFESPDSVMLALK 310
Query: 107 LNESELHGRQLKVTVKRT--------NVPGMKQHRPR 135
LN S L +Q K+ VKR+ PG K PR
Sbjct: 311 LNGSTL--QQRKIRVKRSVKKEKEKKTPPGRKAEGPR 345
>gi|125563035|gb|EAZ08415.1| hypothetical protein OsI_30679 [Oryza sativa Indica Group]
Length = 226
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Query: 43 EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAV 101
EEV +R ++VGN+ + T +E+ F GTV R + DK+ G+ + + +V E
Sbjct: 65 EEVAARKLYVGNIPRTVTNDELAAMFADHGTVERAEVMFDKYTGRSRRFGFVTMSTPEEA 124
Query: 102 QEALH-LNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMV 142
A+ LNE+E+ GR++KV V + +P + + P P P V
Sbjct: 125 NAAIESLNETEVGGRKIKVNVTESFLPNIDRSAP-EPEPVFV 165
>gi|115478330|ref|NP_001062760.1| Os09g0279500 [Oryza sativa Japonica Group]
gi|49387841|dbj|BAD26506.1| putative plastid-specific ribosomal protein 2 precursor [Oryza
sativa Japonica Group]
gi|49388840|dbj|BAD26030.1| putative plastid-specific ribosomal protein 2 precursor [Oryza
sativa Japonica Group]
gi|113630993|dbj|BAF24674.1| Os09g0279500 [Oryza sativa Japonica Group]
gi|215695254|dbj|BAG90445.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737768|dbj|BAG96898.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641205|gb|EEE69337.1| hypothetical protein OsJ_28655 [Oryza sativa Japonica Group]
Length = 245
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Query: 43 EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAV 101
EEV +R ++VGN+ + T +E+ F GTV R + DK+ G+ + + +V E
Sbjct: 65 EEVAARKLYVGNIPRTVTNDELAAMFADHGTVERAEVMFDKYTGRSRRFGFVTMSTPEEA 124
Query: 102 QEALH-LNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMV 142
A+ LNE+E+ GR++KV V + +P + + P P P V
Sbjct: 125 NAAIESLNETEVGGRKIKVNVTESFLPNIDRSAP-EPEPVFV 165
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 45 VDSR-SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTI-RTDKFGQPKGYAYVEFLQSEAVQ 102
VDS+ V+VGN+ S T E ++ F G V T+ R + KGY +V F E VQ
Sbjct: 165 VDSQYKVYVGNLAKSVTTEMLKNFFSEKGEVLSATVSRIPGTAKSKGYGFVTFSSEEEVQ 224
Query: 103 EALH-LNESELHGRQLKV 119
A+ N +EL G+ ++V
Sbjct: 225 AAVSTFNNAELEGQPIRV 242
>gi|308504932|ref|XP_003114649.1| hypothetical protein CRE_28335 [Caenorhabditis remanei]
gi|308258831|gb|EFP02784.1| hypothetical protein CRE_28335 [Caenorhabditis remanei]
Length = 150
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL-H 106
SV+VGNV Y T EE+ +F + G VN V I D+ G+P+G+A+VE+ + Q A+
Sbjct: 73 SVYVGNVPYQGTEEEIGNYFSTVGIVNNVRIVYDRETGRPRGFAFVEYSEEAGAQRAVEE 132
Query: 107 LNESELHGRQLKVT 120
LN + +GR L+V
Sbjct: 133 LNGAAFNGRNLRVN 146
>gi|406868018|gb|EKD21055.1| RNA binding domain containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 426
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 106
S S++VGN+ + T E++Q+ F+S G + VTI +D G KG+ YVEF E A+
Sbjct: 230 SNSIYVGNLLFDITQEDIQREFESFGPIKSVTIASDNRGLSKGFGYVEFESIEQATAAIE 289
Query: 107 -LNESELHGRQLKVT 120
N++ L GR+L V
Sbjct: 290 GKNQAVLEGRRLVVN 304
Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSE-AVQEA 104
S+++F+GN+ + + ++ + F+ V V + D+ GQP+G+A+ +F+ E A++
Sbjct: 323 SKTLFIGNLAFEMSDADLNKLFRDIRNVIDVRVAIDRRTGQPRGFAHADFVDVESAIKGK 382
Query: 105 LHLNESELHGRQLKV 119
L E++GR L++
Sbjct: 383 DALLGKEVYGRTLRI 397
>gi|308505322|ref|XP_003114844.1| hypothetical protein CRE_28621 [Caenorhabditis remanei]
gi|308259026|gb|EFP02979.1| hypothetical protein CRE_28621 [Caenorhabditis remanei]
Length = 85
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH- 106
SV+VGN + + EE+ F + G V V I D+ G+P+G+A+VEF Q+A+
Sbjct: 7 SVYVGNAPFQTSEEEIGNFFSNVGNVTNVRIVYDRETGRPRGFAFVEFADEAGAQKAVQE 66
Query: 107 LNESELHGRQLKVTV 121
LN +E +GRQL+V +
Sbjct: 67 LNGAEFNGRQLRVNL 81
>gi|384494771|gb|EIE85262.1| hypothetical protein RO3G_09972 [Rhizopus delemar RA 99-880]
Length = 218
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 50 VFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLN 108
VF+GN+ ++ T EE+Q+HF + + + + TDK G+PKG+A++EF S+ + +AL +
Sbjct: 97 VFIGNLPFTTTKEELQKHFSTVENIKSLRLLTDKATGKPKGFAFMEFTNSKDLNKALSFH 156
Query: 109 ESELHGRQLKVTV 121
+ RQ+ V +
Sbjct: 157 HTFFKRRQINVEL 169
>gi|198418855|ref|XP_002123179.1| PREDICTED: similar to cleavage stimulation factor, 3 pre-RNA,
subunit 2, 64kDa [Ciona intestinalis]
Length = 455
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 6/89 (6%)
Query: 38 SLANREEVD----SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAY 92
++ +R+ VD RSVFVGN+ Y T E+++ F G V + D+ G+PKGY +
Sbjct: 2 NMRDRDPVDYERSIRSVFVGNIPYEATEEQLKDIFNEVGNVISFRLVFDRESGKPKGYGF 61
Query: 93 VEFLQSE-AVQEALHLNESELHGRQLKVT 120
E+ E A+ +LN ELHGR L+V
Sbjct: 62 AEYQDKETALSSMRNLNGRELHGRPLRVD 90
>gi|169623995|ref|XP_001805404.1| hypothetical protein SNOG_15247 [Phaeosphaeria nodorum SN15]
gi|111056352|gb|EAT77472.1| hypothetical protein SNOG_15247 [Phaeosphaeria nodorum SN15]
Length = 451
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Query: 29 KQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQP 87
K D +A + ++ + ++F+GN+ + C+ E +Q+ FQ G + RV++ TD+ G
Sbjct: 279 KPDQSARANKYGDKRSAPANTLFLGNLSFDCSNEGIQEIFQEYGNITRVSLPTDRDTGSL 338
Query: 88 KGYAYVEFLQSEAVQEALH-LNESELHGRQLKV 119
KG+ YV+F E AL LN E+ GR +++
Sbjct: 339 KGFGYVDFGTVEEATAALEALNGQEVEGRAIRI 371
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEF-LQSEAVQEAL 105
+++FVG++ ++ + +++ F+ G + + TD+ G+ KG+ YVEF ++A +
Sbjct: 198 KNLFVGSLSWNIDEDWLRREFEGFGEITGCRVITDRESGRSKGFGYVEFASAADAAKAKA 257
Query: 106 HLNESELHGRQLKV 119
++E EL GR L V
Sbjct: 258 EMHEYELDGRGLNV 271
>gi|434405771|ref|YP_007148656.1| RRM domain-containing RNA-binding protein [Cylindrospermum stagnale
PCC 7417]
gi|428260026|gb|AFZ25976.1| RRM domain-containing RNA-binding protein [Cylindrospermum stagnale
PCC 7417]
Length = 103
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH- 106
S++VGN+ Y T E+++ F+ GTVNRV + TD+ G+P+G+A+VE Q A+
Sbjct: 2 SIYVGNLSYQVTEEDLKLAFKEYGTVNRVQLPTDRETGRPRGFAFVEMETDVQEQAAIDA 61
Query: 107 LNESELHGRQLKV 119
L+ +E GR LKV
Sbjct: 62 LDGAEWMGRDLKV 74
>gi|392296290|gb|EIW07392.1| Nop12p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 459
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALH 106
RS+FVGN+D+ E + +HF+ CG + V IR K KG+AYV+F ++V +AL
Sbjct: 279 RSIFVGNLDFEEIEESLWKHFEPCGDIEYVRIIRDSKTNMGKGFAYVQFKDLQSVNKALL 338
Query: 107 LNE 109
LNE
Sbjct: 339 LNE 341
>gi|6324532|ref|NP_014601.1| Nop12p [Saccharomyces cerevisiae S288c]
gi|74676462|sp|Q08208.1|NOP12_YEAST RecName: Full=Nucleolar protein 12
gi|1419839|emb|CAA99043.1| unnamed protein product [Saccharomyces cerevisiae]
gi|207341353|gb|EDZ69435.1| YOL041Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256273915|gb|EEU08834.1| Nop12p [Saccharomyces cerevisiae JAY291]
gi|259149444|emb|CAY86248.1| Nop12p [Saccharomyces cerevisiae EC1118]
gi|285814848|tpg|DAA10741.1| TPA: Nop12p [Saccharomyces cerevisiae S288c]
gi|323346597|gb|EGA80883.1| Nop12p [Saccharomyces cerevisiae Lalvin QA23]
gi|349581127|dbj|GAA26285.1| K7_Nop12p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365763209|gb|EHN04739.1| Nop12p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 459
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALH 106
RS+FVGN+D+ E + +HF+ CG + V IR K KG+AYV+F ++V +AL
Sbjct: 279 RSIFVGNLDFEEIEESLWKHFEPCGDIEYVRIIRDSKTNMGKGFAYVQFKDLQSVNKALL 338
Query: 107 LNE 109
LNE
Sbjct: 339 LNE 341
>gi|323303035|gb|EGA56838.1| Nop12p [Saccharomyces cerevisiae FostersB]
Length = 459
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALH 106
RS+FVGN+D+ E + +HF+ CG + V IR K KG+AYV+F ++V +AL
Sbjct: 279 RSIFVGNLDFEEIEESLWKHFEPCGDIEYVRIIRDSKTNMGKGFAYVQFKDLQSVNKALL 338
Query: 107 LNE 109
LNE
Sbjct: 339 LNE 341
>gi|151945592|gb|EDN63833.1| nucleolar protein [Saccharomyces cerevisiae YJM789]
Length = 459
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALH 106
RS+FVGN+D+ E + +HF+ CG + V IR K KG+AYV+F ++V +AL
Sbjct: 279 RSIFVGNLDFEEIEESLWKHFEPCGDIEYVRIIRDSKTNMGKGFAYVQFKDLQSVNKALL 338
Query: 107 LNE 109
LNE
Sbjct: 339 LNE 341
>gi|170588491|ref|XP_001899007.1| RNA binding protein, identical [Brugia malayi]
gi|170588493|ref|XP_001899008.1| RNA binding protein, identical [Brugia malayi]
gi|1813684|gb|AAC47624.1| putative RNA binding protein [Brugia malayi]
gi|158593220|gb|EDP31815.1| RNA binding protein, identical [Brugia malayi]
gi|158593221|gb|EDP31816.1| RNA binding protein, identical [Brugia malayi]
gi|208429687|gb|ACI26725.1| putative RNA binding protein [Wuchereria bancrofti]
gi|402582983|gb|EJW76928.1| RNA-binding protein [Wuchereria bancrofti]
Length = 82
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL 105
SRSVFVGN+ YS E+V F G V V I D+ G+P+G+ + EF A ++A+
Sbjct: 2 SRSVFVGNLPYSAREEDVANFFWQVGPVTSVRIVLDRDTGRPRGFGFCEFETEAAAEQAV 61
Query: 106 -HLNESELHGRQLKV 119
+N +E GRQL+V
Sbjct: 62 GSMNHAEFMGRQLRV 76
>gi|50539824|ref|NP_001002382.1| RNA-binding protein 34 [Danio rerio]
gi|49900339|gb|AAH75875.1| RNA binding motif protein 34 [Danio rerio]
Length = 411
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH 106
RS+FVGN+ Y + +Q HFQ CG + V + D+ G KG+ YV F ++V AL
Sbjct: 252 RSIFVGNLPYDISELPLQNHFQECGNIEAVRLVRDRDSGMGKGFGYVLFESPDSVMLALK 311
Query: 107 LNESELHGRQLKV 119
LN S L R+++V
Sbjct: 312 LNGSTLQQRKIRV 324
>gi|242814322|ref|XP_002486347.1| RNA binding protein Rnp24, putative [Talaromyces stipitatus ATCC
10500]
gi|218714686|gb|EED14109.1| RNA binding protein Rnp24, putative [Talaromyces stipitatus ATCC
10500]
Length = 385
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRT-DKFGQPKGYAYVEFLQSEAVQEAL 105
SR +FVGN+ + T E VQ+HF+ CG + V + T + G+ KGY +VEF EA Q A+
Sbjct: 188 SRRIFVGNLGFDATKETVQEHFEPCGAITNVHLATFEDSGKCKGYGWVEFETIEAAQHAV 247
Query: 106 H 106
+
Sbjct: 248 N 248
>gi|218200393|gb|EEC82820.1| hypothetical protein OsI_27609 [Oryza sativa Indica Group]
Length = 164
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 50 VFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLN 108
++VGN+ +S P+E++++F CGTV + TD K G+ + Y ++ F +E ++ AL L+
Sbjct: 84 IYVGNIAWSVEPQELREYFSQCGTVVSTRLLTDRKGGRGRVYGFLSFASAEELEAALKLD 143
Query: 109 ESELHGRQLKV 119
+ HGR + V
Sbjct: 144 NTHFHGRNILV 154
>gi|115474525|ref|NP_001060859.1| Os08g0117100 [Oryza sativa Japonica Group]
gi|50725630|dbj|BAD33097.1| putative RNA-binding protein RNP-D precursor [Oryza sativa Japonica
Group]
gi|113622828|dbj|BAF22773.1| Os08g0117100 [Oryza sativa Japonica Group]
gi|125559951|gb|EAZ05399.1| hypothetical protein OsI_27607 [Oryza sativa Indica Group]
gi|215704603|dbj|BAG94231.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 319
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 50 VFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLN 108
++VGN+ +S P+E++++F CGTV + TD K G+ + Y ++ F +E ++ AL L+
Sbjct: 239 IYVGNIAWSVEPQELREYFSQCGTVVSTRLLTDRKGGRGRVYGFLSFASAEELEAALKLD 298
Query: 109 ESELHGRQLKV 119
+ HGR + V
Sbjct: 299 NTHFHGRNILV 309
>gi|190407303|gb|EDV10570.1| nucleolar protein 12 [Saccharomyces cerevisiae RM11-1a]
Length = 459
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALH 106
RS+FVGN+D+ E + +HF+ CG + V IR K KG+AYV+F ++V +AL
Sbjct: 279 RSIFVGNLDFEEIEESLWKHFEPCGDIEYVRIIRDSKTNMGKGFAYVQFKDLQSVNKALL 338
Query: 107 LNE 109
LNE
Sbjct: 339 LNE 341
>gi|254424963|ref|ZP_05038681.1| RNA-binding protein, putative [Synechococcus sp. PCC 7335]
gi|196192452|gb|EDX87416.1| RNA-binding protein, putative [Synechococcus sp. PCC 7335]
Length = 92
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 55/88 (62%), Gaps = 5/88 (5%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH- 106
S++VGN+ YS E+++ F GTV R+T+ TD+ G+P+G+A+VE + ++A+
Sbjct: 2 SIYVGNLSYSAKEEDLEGVFGEYGTVKRITLPTDRETGRPRGFAFVEMEEDATEEKAIEA 61
Query: 107 LNESELHGRQLKVTVKRTNVPGMKQHRP 134
L+ +E GR+L+V + P ++RP
Sbjct: 62 LDGAEWMGRELRVNKAKPREP---RNRP 86
>gi|323335669|gb|EGA76952.1| Nop12p [Saccharomyces cerevisiae Vin13]
Length = 358
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALH 106
RS+FVGN+D+ E + +HF+ CG + V IR K KG+AYV+F ++V +AL
Sbjct: 279 RSIFVGNLDFEEIEESLWKHFEPCGDIEYVRIIRDSKTNMGKGFAYVQFKDLQSVNKALL 338
Query: 107 LNE 109
LNE
Sbjct: 339 LNE 341
>gi|358056844|dbj|GAA97194.1| hypothetical protein E5Q_03870 [Mixia osmundae IAM 14324]
Length = 267
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 7/88 (7%)
Query: 50 VFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFG-------QPKGYAYVEFLQSEAVQ 102
VFVGN+ Y T ++V HF+ CG + V + T K + KGYA+VEF Q+ ++Q
Sbjct: 95 VFVGNLAYDVTADQVAAHFEPCGEIPSVRLGTSKAAAEGAQQVKSKGYAFVEFKQASSLQ 154
Query: 103 EALHLNESELHGRQLKVTVKRTNVPGMK 130
AL L+ S + + K+ V+ T G K
Sbjct: 155 NALRLHHSLIPPSKRKINVELTAGGGGK 182
>gi|222639809|gb|EEE67941.1| hypothetical protein OsJ_25829 [Oryza sativa Japonica Group]
Length = 164
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 50 VFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLN 108
++VGN+ +S P+E++++F CGTV + TD K G+ + Y ++ F +E ++ AL L+
Sbjct: 84 IYVGNIAWSVEPQELREYFSQCGTVVSTRLLTDRKGGRGRVYGFLSFASAEELEAALKLD 143
Query: 109 ESELHGRQLKV 119
+ HGR + V
Sbjct: 144 NTHFHGRNILV 154
>gi|219114504|ref|XP_002176422.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217402668|gb|EEC42658.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 104
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHL 107
+VF+GN+ + + ++Q F CG +++V TD+ G KG+ ++EF+ +E+ +A+ +
Sbjct: 21 TVFIGNLAWDVDEDTIKQSFADCGEISQVRFATDRETGDFKGFGHIEFVATESTDKAIEM 80
Query: 108 NESELHGRQLKVTV---KRTNVPG 128
+E+ GR ++V KR + PG
Sbjct: 81 AGTEILGRPVRVDFANDKRNSAPG 104
>gi|294951822|ref|XP_002787139.1| nucleolar protein, putative [Perkinsus marinus ATCC 50983]
gi|239901796|gb|EER18935.1| nucleolar protein, putative [Perkinsus marinus ATCC 50983]
Length = 756
Score = 58.9 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 64/114 (56%), Gaps = 2/114 (1%)
Query: 8 MEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVD-SRSVFVGNVDYSCTPEEVQQ 66
ME+ T R E + A + + +E V+ S+SVF+GN+ +S T E ++Q
Sbjct: 471 MEQAPTGKRAASEATTEEDEAPAPKRAKMNDGSAQESVERSKSVFIGNLPFSMTKEWLEQ 530
Query: 67 HFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
F CG + RV+I TD + G+ KG+A+++F ++ ++A+ N + GR L++
Sbjct: 531 IFSWCGDIERVSIPTDWESGKIKGFAFLDFADEDSAEKAVGKNGEDCEGRDLRI 584
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL 105
S SVFVGN+ +S T + + + F CG++ R + TD+ G P+G+AY++F ++ + A
Sbjct: 616 SASVFVGNLPWSMTQDWLYEVFGDCGSITRCFMPTDRETGNPRGFAYIDFDTEDSAENAT 675
Query: 106 HLNESELHGRQLKV 119
L+ ++L GRQ++V
Sbjct: 676 KLSGTDLEGRQIRV 689
>gi|146101305|ref|XP_001469083.1| putative RNA binding protein [Leishmania infantum JPCM5]
gi|398023353|ref|XP_003864838.1| RNA binding protein, putative [Leishmania donovani]
gi|134073452|emb|CAM72182.1| putative RNA binding protein [Leishmania infantum JPCM5]
gi|322503074|emb|CBZ38158.1| RNA binding protein, putative [Leishmania donovani]
Length = 197
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCG--TVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEAL 105
S+F+GNV Y+ T E+V FQ G V RV +R + G KG+ YVEF+ + +VQ A+
Sbjct: 13 SIFLGNVAYNTTEEDVWSFFQEHGIADVKRVRLVRDRETGDCKGFGYVEFMHASSVQPAI 72
Query: 106 HLNESELHGRQLKV 119
+L+GR+L++
Sbjct: 73 ETRGDKLNGRELRI 86
>gi|451850002|gb|EMD63305.1| hypothetical protein COCSADRAFT_161812 [Cochliobolus sativus
ND90Pr]
Length = 489
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 29 KQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQP 87
K D A + ++ S ++F+GN+ + CT E +Q+ F G V RV++ TD+ G
Sbjct: 316 KPDANARANKFGDKRSAPSNTLFIGNLSFDCTNETIQEVFAEYGNVTRVSLPTDRDSGAL 375
Query: 88 KGYAYVEFLQSEAVQEALH-LNESELHGRQLKV 119
KG+ YV+F E AL L+ ++ GR L+V
Sbjct: 376 KGFGYVDFGSQEEATAALEALHGQDVAGRPLRV 408
Score = 42.0 bits (97), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEF-LQSEAVQEAL 105
+++FVGN+ ++ + +++ F+S G + + TD+ G+ KG+ YVEF ++A +
Sbjct: 235 KNLFVGNLSWNIDEDWLRREFESFGEIVGCRVITDRETGRAKGFGYVEFAKAADAAKAQK 294
Query: 106 HLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPF 140
++E EL GR L V + P K R N F
Sbjct: 295 DMHEYELDGRPLNVDF---STPRQKPDANARANKF 326
>gi|323352349|gb|EGA84884.1| Nop12p [Saccharomyces cerevisiae VL3]
Length = 346
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALH 106
RS+FVGN+D+ E + +HF+ CG + V IR K KG+AYV+F ++V +AL
Sbjct: 267 RSIFVGNLDFEEIEESLWKHFEPCGDIEYVRIIRDSKTNMGKGFAYVQFKDLQSVNKALL 326
Query: 107 LNE 109
LNE
Sbjct: 327 LNE 329
>gi|193212689|ref|YP_001998642.1| RNP-1 like RNA-binding protein [Chlorobaculum parvum NCIB 8327]
gi|193086166|gb|ACF11442.1| RNP-1 like RNA-binding protein [Chlorobaculum parvum NCIB 8327]
Length = 88
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEAL-H 106
++++GN+DY T +++ F G V + ++ DKF G+ KG+ +VE E EA+
Sbjct: 2 NIYIGNLDYEITETDLRDAFSEFGDVAKASVIMDKFSGRSKGFGFVEMTNDEEANEAISS 61
Query: 107 LNESELHGRQLKVT 120
LNES+L R +KV
Sbjct: 62 LNESKLGSRNIKVN 75
>gi|195453715|ref|XP_002073909.1| GK12898 [Drosophila willistoni]
gi|194169994|gb|EDW84895.1| GK12898 [Drosophila willistoni]
Length = 421
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%)
Query: 34 AGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYV 93
AG A+ + R VFVGN+ YS T +++ F SCG ++ + D G AYV
Sbjct: 237 AGDGDKASSDADAKRCVFVGNLKYSATEKKLHDVFSSCGEIDNIRCLQDGTKGCSGVAYV 296
Query: 94 EFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHR 133
F ++AV AL LN++ + R + V G KQ R
Sbjct: 297 NFKNADAVGLALELNQTLIDDRPINVERYSVKKLGAKQQR 336
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 66/137 (48%), Gaps = 26/137 (18%)
Query: 5 LKEMEEEATA-------LRQMHAKVGNEMASKQDPAAGGSSLANRE---EVDSRSVFVGN 54
++E EE+A A + +K G + +K DPAAG RE + ++ +VFVGN
Sbjct: 101 VEEKEEDAVAEGSEKNSKGKQKSKTGKKGNNK-DPAAG-----KRERDPDAEAATVFVGN 154
Query: 55 VDYSCTPEEVQQHFQSCGTVNRVTIRTD------KFGQPKGY----AYVEFLQSEAVQEA 104
+ + ++ + F+ GTVN + +RT K Q K AYV E Q+A
Sbjct: 155 LPINTKRVQLIRLFEPYGTVNSIRLRTAGGKLLFKHKQRKSAGSLNAYVVLQSPEVAQKA 214
Query: 105 LHLNESELHGRQLKVTV 121
L LN +E L+VT+
Sbjct: 215 LTLNGTEFKENHLRVTL 231
>gi|403417497|emb|CCM04197.1| predicted protein [Fibroporia radiculosa]
Length = 257
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 7/79 (8%)
Query: 50 VFVGNVDYSCTPEEVQQHFQSCG---TVNRVTIRTDKFGQP----KGYAYVEFLQSEAVQ 102
+F+GN+ Y+ T + +Q HF +C TV +T + G+P KG A++EF A+Q
Sbjct: 139 LFIGNLKYTTTQKAIQIHFAACDPPPTVRLITPKAPSSGKPVTKSKGCAFLEFSSRNALQ 198
Query: 103 EALHLNESELHGRQLKVTV 121
+AL L++SEL GR + V +
Sbjct: 199 QALKLHQSELEGRMINVEL 217
>gi|427718424|ref|YP_007066418.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
gi|427350860|gb|AFY33584.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
Length = 101
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 51/74 (68%), Gaps = 4/74 (5%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL-- 105
S++VGN+ Y T E++++ F GTVNRV + TD+ G+P+G+A+VE ++++A + A
Sbjct: 2 SIYVGNLSYQVTEEDLKRAFAEYGTVNRVQLPTDRETGRPRGFAFVE-METDAQETAAIE 60
Query: 106 HLNESELHGRQLKV 119
L+ +E GR LKV
Sbjct: 61 ALDGAEWMGRDLKV 74
>gi|398016175|ref|XP_003861276.1| hypothetical protein, conserved [Leishmania donovani]
gi|322499501|emb|CBZ34574.1| hypothetical protein, conserved [Leishmania donovani]
Length = 243
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 43 EEVDSRSVFVGNV------DYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEF 95
++ DSRS+F+GN+ + TPEE+ Q F CG + T+ D+ G+PKG AY+EF
Sbjct: 128 KDTDSRSIFIGNLPRGTDGTPATTPEELVQFFADCGNILNCTVLKDRATGEPKGTAYIEF 187
Query: 96 LQSEAVQEALHL-NESELHGRQLKVTVKRTNV 126
A+ +A+ N + G + V V + +
Sbjct: 188 ADYTAMGKAIDTKNNANFKGSTIIVCVSTSPI 219
>gi|339898436|ref|XP_003392587.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|321399568|emb|CBZ08755.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 245
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 43 EEVDSRSVFVGNV------DYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEF 95
++ DSRS+F+GN+ + TPEE+ Q F CG + T+ D+ G+PKG AY+EF
Sbjct: 130 KDTDSRSIFIGNLPRGTDGTPATTPEELVQFFADCGNILNCTVLKDRATGEPKGTAYIEF 189
Query: 96 LQSEAVQEALHL-NESELHGRQLKVTVKRTNV 126
A+ +A+ N + G + V V + +
Sbjct: 190 ADYTAMGKAIDTKNNANFKGSTIIVCVSTSPI 221
>gi|116624848|ref|YP_827004.1| RNP-1 like RNA-binding protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116228010|gb|ABJ86719.1| RNP-1 like RNA-binding protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 97
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH 106
+++FVGN+ + T + V+ F++ G V+RV I TD+ GQP+G+ +VE ++A+
Sbjct: 2 KNIFVGNLSFGATEDTVRALFETHGKVDRVNICTDRDSGQPRGFGFVEMANDSEAEKAIS 61
Query: 107 -LNESELHGRQLKVTVKR 123
+N EL GR L V R
Sbjct: 62 AVNGKELDGRALNVNEAR 79
>gi|452001822|gb|EMD94281.1| hypothetical protein COCHEDRAFT_1094167 [Cochliobolus
heterostrophus C5]
Length = 501
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Query: 29 KQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQP 87
K D A + ++ S ++F+GN+ + CT E +Q+ F G V RV++ TD+ G
Sbjct: 329 KPDANARANKFGDKRSAPSNTLFIGNLSFDCTNETIQEVFAEYGNVTRVSLPTDRDSGAL 388
Query: 88 KGYAYVEFLQSEAVQEALH-LNESELHGRQLKV 119
KG+ YV+F E AL L ++ GR L+V
Sbjct: 389 KGFGYVDFGSQEEATAALEALQGQDVAGRPLRV 421
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEF-LQSEAVQEAL 105
+++FVGN+ ++ + +++ F+S G + + TD+ G+ KG+ YVEF ++A +
Sbjct: 248 KNLFVGNLSWNIDEDWLRREFESFGEIVGCRVITDRETGRAKGFGYVEFAKAADAAKAQK 307
Query: 106 HLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPF 140
++E EL GR L V + P K R N F
Sbjct: 308 DMHEYELDGRPLNVDF---STPRQKPDANARANKF 339
>gi|444314259|ref|XP_004177787.1| hypothetical protein TBLA_0A04750 [Tetrapisispora blattae CBS 6284]
gi|387510826|emb|CCH58268.1| hypothetical protein TBLA_0A04750 [Tetrapisispora blattae CBS 6284]
Length = 473
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 7/82 (8%)
Query: 46 DSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTI-RTDKFGQPKGYAYVEFLQSEAVQEA 104
+ RS+FVGN+D+ E + +HF SCG + V I R K KG+AYV+F ++V +A
Sbjct: 297 NKRSIFVGNLDFEEDEENLWKHFLSCGDIEYVRIVRDSKTNLGKGFAYVQFKDLQSVNKA 356
Query: 105 LHLNESEL------HGRQLKVT 120
L L + + GR+L+VT
Sbjct: 357 LLLADKVMIKKDGKKGRKLRVT 378
>gi|113478076|ref|YP_724137.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
gi|110169124|gb|ABG53664.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
Length = 97
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH- 106
S++VGN+ Y T E++ + F GTV RV + TD+ G+P+G+ +VE E Q+A+
Sbjct: 2 SIYVGNLSYDVTQEDLSEVFAEYGTVKRVQLPTDRETGRPRGFGFVEMSSEEEEQKAIDA 61
Query: 107 LNESELHGRQLKVT 120
L+ +E GR +KV
Sbjct: 62 LDSAEWMGRDIKVN 75
>gi|431931272|ref|YP_007244318.1| RRM domain-containing RNA-binding protein [Thioflavicoccus mobilis
8321]
gi|431829575|gb|AGA90688.1| RRM domain-containing RNA-binding protein [Thioflavicoccus mobilis
8321]
Length = 94
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEF-LQSEAVQEALH 106
+++VGN+ Y T +E+++ F + G ++ V++ TDKF GQ KG+ +VE SEA
Sbjct: 2 NIYVGNLAYGVTEDELREAFGAFGEISSVSVITDKFTGQSKGFGFVEMPNNSEADAAIKA 61
Query: 107 LNESELHGRQLKVTVKR 123
LNE+ L GR ++V R
Sbjct: 62 LNETPLKGRNIRVNEAR 78
>gi|413938965|gb|AFW73516.1| hypothetical protein ZEAMMB73_612183 [Zea mays]
Length = 120
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 40/55 (72%), Gaps = 3/55 (5%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNV 55
MK RLKEMEEEA ALR M AKV EM DP+A S+ +E+VD+RSV+VGNV
Sbjct: 42 MKRRLKEMEEEAAALRDMQAKVAKEMQGG-DPSA--STAEAKEQVDARSVYVGNV 93
>gi|321463774|gb|EFX74787.1| hypothetical protein DAPPUDRAFT_306960 [Daphnia pulex]
Length = 432
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEAL 105
S +FVGN+ + T E + HF CG ++ V I D+ G KG+ YV F +++V+ AL
Sbjct: 248 SLGIFVGNLTFDVTDEALWLHFGECGKISDVRIIRDRVNGMGKGFGYVNFESADSVELAL 307
Query: 106 HLNESELHGRQLKVTVKRTN 125
L++S L+ R ++V+ + N
Sbjct: 308 KLDQSLLNDRPIRVSRCKKN 327
>gi|330928516|ref|XP_003302299.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
gi|311322459|gb|EFQ89618.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
Length = 403
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 9/120 (7%)
Query: 6 KEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANR----EEVDSRSVFVGNVDYSCTP 61
KEM E RQ++ A P A G + AN+ S ++F+GNV + C+
Sbjct: 276 KEMHEYELDGRQLNVDFSTPRAK---PDANGGARANKYGDKRSPPSNTLFLGNVSFECSN 332
Query: 62 EEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH-LNESELHGRQLKV 119
E +Q+ F G++ RV++ TD+ G KG+ YV+F + AL LN ++ GR +++
Sbjct: 333 ESIQEVFAEYGSITRVSLPTDRDTGALKGFGYVDFSSQQEATAALEALNGQDIGGRAIRI 392
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQ-SEAVQEAL 105
+++FVGN+ ++ + +++ F+ G + + TD+ G+ KG+ YVEF ++A +
Sbjct: 217 KNLFVGNMSWNIDEDWLRREFEGFGEIVGCRVITDRETGRAKGFGYVEFSNAADAAKAQK 276
Query: 106 HLNESELHGRQLKV 119
++E EL GRQL V
Sbjct: 277 EMHEYELDGRQLNV 290
>gi|218186222|gb|EEC68649.1| hypothetical protein OsI_37086 [Oryza sativa Indica Group]
Length = 773
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 32 PAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKGY 90
P + A +E + S+FV N+ SC PE+VQ FQ G V V + D G+P+G+
Sbjct: 315 PPSSRHGCAKDKEGAAVSLFVSNLTRSCRPEDVQVPFQKFGPVRDVYLPKDYNTGEPRGF 374
Query: 91 AYVEFLQ-SEAVQEALHLNESELHGRQLKVT 120
A+VEF S+A + H+N L GR++ V
Sbjct: 375 AFVEFAHSSDASKARYHMNRKMLSGREISVA 405
>gi|406602185|emb|CCH46236.1| Polyadenylate-binding protein, cytoplasmic and nuclear
[Wickerhamomyces ciferrii]
Length = 652
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 13/135 (9%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEAL-HL 107
++FV N+D S E++++ FQS GT++ V + D+ G+ KG+ +V F E A+ +
Sbjct: 345 NLFVKNLDDSIDDEKLKEEFQSFGTISSVKVMIDESGKSKGFGFVSFSSPEEASRAISEM 404
Query: 108 NESELHGRQLKVT------VKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPP--FLYSPYG 159
N+ L G+ L V V+R+ + Q R N + Q+ A P F+ +P+
Sbjct: 405 NQHMLAGKPLYVALAQRKDVRRSQLEQQIQAR----NQLRLQQAAAAGGLPGQFIPTPFI 460
Query: 160 YGKIPRFRMPMRYSP 174
YG+ P+F P P
Sbjct: 461 YGQQPQFLPPGARGP 475
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH-L 107
+V+V N+D + EEV++ F GTV + D G+ +G+A+V + + EA +++ L
Sbjct: 242 NVYVKNIDLEASEEEVKELFTPFGTVTSFYLEKDAEGKSRGFAFVNYEEHEAAVKSIESL 301
Query: 108 NESELHGRQLKV 119
N+ + G++L V
Sbjct: 302 NDQDYKGKKLYV 313
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 14/94 (14%)
Query: 26 MASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFG 85
M S++DPA + N VF+ N+ + + + F + G + + TD FG
Sbjct: 134 MWSQRDPAKRRNGEGN--------VFIKNLHPAIDNKALHDTFSAFGRILSCKVATDNFG 185
Query: 86 QPKGYAYVEFLQSEAVQEALH------LNESELH 113
Q KG+ +V F EA Q A+ LN +E++
Sbjct: 186 QSKGFGFVHFESPEAAQAAIENVNGMLLNNNEVY 219
>gi|339248325|ref|XP_003375796.1| RNA-binding protein squid [Trichinella spiralis]
gi|316970795|gb|EFV54670.1| RNA-binding protein squid [Trichinella spiralis]
Length = 329
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 42 REEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEA 100
RE+ + R +FVG + + ++ HF G V V ++ D + G+ +G+A+VEF +EA
Sbjct: 52 REKNEERKIFVGGISWDTNENDLTNHFNQFGDVVHVQVKYDHYTGRSRGFAFVEFATAEA 111
Query: 101 VQEALHLNESELHGRQLKV 119
++AL ++EL G++ +V
Sbjct: 112 CKKALAKKDAELKGKKCEV 130
>gi|168039508|ref|XP_001772239.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676409|gb|EDQ62892.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 507
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 5/117 (4%)
Query: 9 EEEATALRQMHAKVGNEMA---SKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQ 65
E + A + A VG ++A K++ A S + +FVG + T E+++
Sbjct: 83 EADLAAAEETDAHVGADVAIVEDKEEKDAEKSGDLLKRPPHGSEIFVGGITRDTTEEDLR 142
Query: 66 QHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH-LNESELHGRQLKVT 120
SCG V V + DK GQ KGYA+V FL E ++A+ LN+SE+ GR+L+ +
Sbjct: 143 TLCSSCGDVYEVRLLKDKDTGQNKGYAFVTFLNEECAEKAIETLNDSEVKGRKLRFS 199
>gi|67920522|ref|ZP_00514042.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|416377747|ref|ZP_11683649.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
gi|67858006|gb|EAM53245.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|357266170|gb|EHJ14837.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
Length = 94
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL-H 106
+++VGN+ Y TPE++ + F GTV RV++ TD+ G+P+G+ +VE + A+
Sbjct: 2 TIYVGNISYDVTPEDLTEVFGDYGTVKRVSLPTDRETGKPRGFGFVEMDNDDEETAAIEE 61
Query: 107 LNESELHGRQLKV 119
L+ +E GRQ++V
Sbjct: 62 LDGAEWLGRQMRV 74
>gi|285808363|gb|ADC35892.1| RNP-1 like RNA-binding protein [uncultured bacterium 246]
Length = 104
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL- 105
R+VFVGN+ + T E++ F++ G + R+ I TD+ GQ +G+A+VE E +A+
Sbjct: 2 RNVFVGNMSFQTTEGELRAAFETYGEIARIQIMTDRDTGQARGFAFVEMTNDEDAAKAIA 61
Query: 106 HLNESELHGRQLKV 119
LN ++L GR L V
Sbjct: 62 GLNGTQLDGRALNV 75
>gi|17508585|ref|NP_493022.1| Protein R09B3.2 [Caenorhabditis elegans]
gi|3879015|emb|CAB03236.1| Protein R09B3.2 [Caenorhabditis elegans]
Length = 83
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL-H 106
SV+VGN + T EE+ F S G +N V I D+ G+P+G+A++EF + + Q A+
Sbjct: 6 SVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQ 65
Query: 107 LNESELHGRQLKVTV 121
+N +E +GR L+V +
Sbjct: 66 MNGAEFNGRPLRVNL 80
>gi|170078237|ref|YP_001734875.1| RNA-binding protein [Synechococcus sp. PCC 7002]
gi|169885906|gb|ACA99619.1| RNA-binding protein [Synechococcus sp. PCC 7002]
Length = 95
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH- 106
S+++GN+ Y T E++++ F G VNRV + TD+ G+P+G+A+VE + A+
Sbjct: 2 SIYIGNLSYQVTDEDLKETFAEYGKVNRVQVPTDRETGRPRGFAFVEMSSEDEENAAIEA 61
Query: 107 LNESELHGRQLKVT 120
L+ +E GR LKV
Sbjct: 62 LDGAEWMGRDLKVN 75
>gi|401429538|ref|XP_003879251.1| putative RNA binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495501|emb|CBZ30806.1| putative RNA binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 455
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCG--TVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEAL 105
S+F+GNV Y+ T E+V FQ G V RV +R + G KG+ YVEF+ + +VQ A+
Sbjct: 271 SIFLGNVAYNTTEEDVWSFFQEHGIADVKRVRLVRDRETGDCKGFGYVEFMHASSVQPAI 330
Query: 106 HLNESELHGRQLKV 119
+L+GR+L++
Sbjct: 331 ETRGDKLNGRELRI 344
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 24/108 (22%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF------------- 84
+L + EE D+R+VFVGN+ + +V++ F+SCG++ V IR
Sbjct: 151 ALHSNEEEDARTVFVGNLPNTIHKRDVEKIFKSCGSITAVRIRCQALEELDEKHQNMGRA 210
Query: 85 -----GQPK------GYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 121
G+ K AYV F ++++ AL N H R L VT
Sbjct: 211 VRVLRGEIKKDAKYSATAYVLFDSAKSIASALEKNGLVFHSRHLVVTT 258
>gi|254564703|ref|XP_002489462.1| Protein of unknown function, localizes to the nucleolus and
nucleoplasm [Komagataella pastoris GS115]
gi|238029258|emb|CAY67181.1| Protein of unknown function, localizes to the nucleolus and
nucleoplasm [Komagataella pastoris GS115]
gi|328349891|emb|CCA36291.1| Uncharacterized RNA-binding protein C660.15 [Komagataella pastoris
CBS 7435]
Length = 385
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 34 AGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRT-DKFGQPKGYAY 92
GG S N+ SR +FVGN+ + T E++++HFQ CG + ++ + T + G+ KG+A+
Sbjct: 196 TGGDSGKNKNPP-SRILFVGNLSFDTTKEDLEEHFQHCGNIVKIRMATFEDSGKCKGFAF 254
Query: 93 VEFLQSEAVQEALH 106
++FL E AL+
Sbjct: 255 IDFLDVEGATNALN 268
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 9/79 (11%)
Query: 50 VFVGNVDYSCTPEEVQ-------QHFQSCGTVNRVT-IRTDKFG-QPKGYAYVEFLQSEA 100
V++GN+ + T +E++ +H T +T I K G + +G+AYV+F + E
Sbjct: 100 VWIGNLTFDTTRDELRSFLIANTEHLDMKITPENITRINLPKKGPKIRGFAYVDFDKPEL 159
Query: 101 VQEALHLNESELHGRQLKV 119
V + L+E L+GR L +
Sbjct: 160 VPVCISLSEQSLNGRNLLI 178
>gi|410640984|ref|ZP_11351510.1| hypothetical protein GCHA_1746 [Glaciecola chathamensis S18K6]
gi|410139549|dbj|GAC09697.1| hypothetical protein GCHA_1746 [Glaciecola chathamensis S18K6]
Length = 151
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Query: 34 AGGSSLANREEVD-SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKGYA 91
+G +++ +VD S++++VGN+ Y + VQQHF+ G V+ V + D + G+ KGY
Sbjct: 55 SGAATVTEEADVDNSKTLYVGNLPYRANEQAVQQHFEIQGQVHSVRLMKDRRTGKRKGYG 114
Query: 92 YVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNV 126
+VE + A + +LN+SE R LKV + + V
Sbjct: 115 FVEMTAAGAEKAIQNLNDSEFQERTLKVRMAKDKV 149
>gi|302695587|ref|XP_003037472.1| hypothetical protein SCHCODRAFT_47147 [Schizophyllum commune H4-8]
gi|300111169|gb|EFJ02570.1| hypothetical protein SCHCODRAFT_47147 [Schizophyllum commune H4-8]
Length = 331
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 7/79 (8%)
Query: 50 VFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQP-------KGYAYVEFLQSEAVQ 102
+FVGN+ +S + E +Q+HF +C + + T K +P KG A++EF A+Q
Sbjct: 155 LFVGNLKFSTSKEAIQRHFSACEPPPEIRLLTPKTTKPGAAPTKSKGCAFLEFQNKTALQ 214
Query: 103 EALHLNESELHGRQLKVTV 121
+AL L++SEL GR + V +
Sbjct: 215 QALKLHQSELEGRLINVEL 233
>gi|254581390|ref|XP_002496680.1| ZYRO0D05654p [Zygosaccharomyces rouxii]
gi|238939572|emb|CAR27747.1| ZYRO0D05654p [Zygosaccharomyces rouxii]
Length = 441
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 46 DSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEA 104
+ RSVFVGN+D+ E + +HF SCG + V IR K KG+AYV+F V +A
Sbjct: 267 NKRSVFVGNLDFEEDEESLWRHFGSCGEIEYVRIIRDPKTNMGKGFAYVQFKDFPNVSKA 326
Query: 105 LHLN----ESELHGRQLKVT 120
L LN ES R+L+VT
Sbjct: 327 LLLNDKPLESNGKSRKLRVT 346
>gi|332304661|ref|YP_004432512.1| RNP-1 like RNA-binding protein [Glaciecola sp. 4H-3-7+YE-5]
gi|410645307|ref|ZP_11355773.1| hypothetical protein GAGA_1315 [Glaciecola agarilytica NO2]
gi|332171990|gb|AEE21244.1| RNP-1 like RNA-binding protein [Glaciecola sp. 4H-3-7+YE-5]
gi|410135079|dbj|GAC04172.1| hypothetical protein GAGA_1315 [Glaciecola agarilytica NO2]
Length = 151
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Query: 34 AGGSSLANREEVD-SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKGYA 91
+G +++ +VD S++++VGN+ Y + VQQHF+ G V+ V + D + G+ KGY
Sbjct: 55 SGAATVTEEADVDNSKTLYVGNLPYRANEQAVQQHFELQGQVHSVRLMKDRRTGKRKGYG 114
Query: 92 YVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNV 126
+VE + A + +LN+SE R LKV + + V
Sbjct: 115 FVEMTAAGAEKAIQNLNDSEFQERTLKVRMAKDKV 149
>gi|260790683|ref|XP_002590371.1| hypothetical protein BRAFLDRAFT_216236 [Branchiostoma floridae]
gi|229275563|gb|EEN46382.1| hypothetical protein BRAFLDRAFT_216236 [Branchiostoma floridae]
Length = 222
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 12/117 (10%)
Query: 33 AAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYA 91
A G L ++ RSVFVGN+ Y T E+++ F G V + D+ G+PKGY
Sbjct: 3 AVGLQGLNPAQDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVISFRLVYDRETGKPKGYG 62
Query: 92 YVEFLQSEAVQEAL-HLNESELHGRQLKVT----------VKRTNVPGMKQHRPRRP 137
+ E+ E A+ +LN EL+GRQL+V +K+ V G Q P P
Sbjct: 63 FCEYKDQETALSAMRNLNGHELNGRQLRVDNAASEKSKEELKQLTVAGPSQESPYGP 119
>gi|50555552|ref|XP_505184.1| YALI0F08943p [Yarrowia lipolytica]
gi|49651054|emb|CAG77991.1| YALI0F08943p [Yarrowia lipolytica CLIB122]
Length = 369
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 45 VDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEA 104
+D + +FVGN+ ++ T E++ + SCG V+ V I+T+ G G+A V F E +A
Sbjct: 219 IDKQRLFVGNIPFATTWYELKAYLGSCGPVSHVEIQTNDVGDSLGFALVTFQDEETASKA 278
Query: 105 LHLNESEL-HGRQLKVTVKR 123
+ L + ++ GR LKV R
Sbjct: 279 IELFDGKMFEGRALKVHYDR 298
>gi|213401557|ref|XP_002171551.1| gar2 [Schizosaccharomyces japonicus yFS275]
gi|211999598|gb|EEB05258.1| gar2 [Schizosaccharomyces japonicus yFS275]
Length = 449
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 37 SSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEF 95
S+ +++ S +VF+GN+ ++ T ++V+ F SCG + V + TD G+PKG+ YV F
Sbjct: 299 SNFGDKQSPPSDTVFIGNLSFNATEDDVRNAFSSCGEIQSVRLPTDMNSGRPKGFGYVTF 358
Query: 96 LQSEAVQEALHLNESELHGR--QLKVTVKRT 124
+A ++ + +N + GR +L + RT
Sbjct: 359 DSIDAAKQCVEMNGHFIAGRPCRLDFSTPRT 389
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 40 ANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTV-NRVTIRTDKFGQPKGYAYVEFLQS 98
A E +S +VFVG + ++ E + + F+ GTV N I + G+ KG+ YV+F
Sbjct: 198 AKSESGESCTVFVGRLSWNVDDEWLGKEFEEYGTVVNARVIMDGQSGRSKGFGYVDFDSP 257
Query: 99 EAVQEALHLN-ESELHGRQLKVTVKR----TNVPGMKQHR 133
EA + A+ +N + E+ GR + + + N G Q R
Sbjct: 258 EAAKAAVAVNGQKEIDGRMVNLDISTPRPAQNNNGFAQQR 297
>gi|209882003|ref|XP_002142439.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209558045|gb|EEA08090.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 1078
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
Query: 46 DSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEAL 105
D+R V+ GN+ YSCT EEV++ F CG++ RV++ + KG A++ F E + A+
Sbjct: 878 DNREVYCGNLPYSCTEEEVRELFAECGSMERVSVLEN-----KGCAFITFKTEEGAKSAM 932
Query: 106 HLNESELHGRQLKVTV 121
N +E GR L++ +
Sbjct: 933 EWNRTEYKGRMLRINM 948
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTI-RTDKFGQPKGYAYVEFLQSEAVQEALHL 107
SV V N+ +S ++ F +CG V RV+I R G+ +G+A VE E +Q L L
Sbjct: 966 SVIVRNIPFSSDESSIKSFFSNCGNVRRVSIPRYSDTGKMRGFAMVEMENDEQIQNVLKL 1025
Query: 108 NESELHGRQLKVTV 121
+ + ++GR++ + +
Sbjct: 1026 SGTSMNGREVTIEI 1039
>gi|383858361|ref|XP_003704670.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Megachile rotundata]
Length = 905
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 44 EVDSR-SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQ 102
EVD + +VF+ N+DY+ T EEV+ + G + + D G+ KGY YV+ +EAV+
Sbjct: 655 EVDDKITVFISNLDYTATEEEVRNALEPAGPITLFKMIRDYKGRSKGYCYVQLSSAEAVE 714
Query: 103 EALHLNESELHGRQLKVT 120
+AL L+ + + GR + V+
Sbjct: 715 KALQLDRTPIRGRPMFVS 732
Score = 40.8 bits (94), Expect = 0.24, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 61/134 (45%), Gaps = 8/134 (5%)
Query: 7 EMEEEATALRQMHAKVGNEMASKQDP-AAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQ 65
E E+A L + + S+ DP GS ++ +FV + + T EE++
Sbjct: 711 EAVEKALQLDRTPIRGRPMFVSRCDPNRTRGSGFKYSCSLEKNKLFVKGLPVTTTKEELE 770
Query: 66 QHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTN 125
+ F+ GT+ V I T + G KG AYVE+ + +AL L +KV+ K +
Sbjct: 771 EIFKVHGTLKEVRIVTYRNGHSKGLAYVEYDDENSAAKAL------LATDGMKVSDKVIS 824
Query: 126 VPGMKQHRPRRPNP 139
V + Q R+ NP
Sbjct: 825 V-AISQPPERKKNP 837
>gi|291286869|ref|YP_003503685.1| RNP-1 like RNA-binding protein [Denitrovibrio acetiphilus DSM
12809]
gi|290884029|gb|ADD67729.1| RNP-1 like RNA-binding protein [Denitrovibrio acetiphilus DSM
12809]
Length = 89
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH- 106
+++VGN+ YS +++ F G V+ V I TD+ G+ KG+ +VE S+ + A+
Sbjct: 2 NIYVGNLSYSTNEDDISALFSKIGEVDSVRIITDRDTGRSKGFGFVEMANSDQAKAAIDK 61
Query: 107 LNESELHGRQLKVT 120
LNE+EL GR L V
Sbjct: 62 LNETELDGRNLTVN 75
>gi|389594851|ref|XP_003722648.1| putative RNA binding protein [Leishmania major strain Friedlin]
gi|323363876|emb|CBZ12882.1| putative RNA binding protein [Leishmania major strain Friedlin]
Length = 455
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCG--TVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEAL 105
S+F+GNV Y+ T E+V FQ G V RV +R + G KG+ YVEF+ + +VQ A+
Sbjct: 271 SIFLGNVAYNTTEEDVWSFFQEHGIADVKRVRLVRDRETGDCKGFGYVEFMHASSVQPAI 330
Query: 106 HLNESELHGRQLKV 119
+L+GR+L++
Sbjct: 331 ETRGDKLNGRELRI 344
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 24/108 (22%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF------------- 84
+L + EE D+R+VFVGN+ + +V++ F+SCG++ V IR
Sbjct: 151 ALHSNEEEDARTVFVGNLPNTIHKRDVEKIFKSCGSITAVRIRCQALEELDEQHQNMGRA 210
Query: 85 -----GQPK------GYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 121
G+ K AYV F ++++ AL N H R + VT
Sbjct: 211 VRVLRGEIKKDAKYSATAYVLFDSAKSIASALEKNGLIFHNRHIVVTT 258
>gi|297620951|ref|YP_003709088.1| RNA-binding protein [Waddlia chondrophila WSU 86-1044]
gi|297376252|gb|ADI38082.1| RNA-binding protein [Waddlia chondrophila WSU 86-1044]
gi|337293226|emb|CCB91217.1| putative RNA-binding protein rbpA [Waddlia chondrophila 2032/99]
Length = 92
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 50 VFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEAL-HL 107
++VGN+ Y + ++ + +F S G V I TD+F GQ KG+ +VEF EA +EA+ L
Sbjct: 3 LYVGNLSYRVSEDQFKDYFASFGEVLSAKIITDRFTGQSKGFGFVEFADKEAAEEAIKEL 62
Query: 108 NESELHGRQLKVTVKRTNVPGMKQHRPRR 136
N S GR + V + M+ PRR
Sbjct: 63 NGSNFEGRSIVVNEAKP----MEDRPPRR 87
>gi|222616447|gb|EEE52579.1| hypothetical protein OsJ_34868 [Oryza sativa Japonica Group]
Length = 864
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 32 PAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKGY 90
P + A +E + S+FV N+ SC PE+VQ FQ G V V + D G+P+G+
Sbjct: 381 PPSSRHGCAKDKEGAAVSLFVSNLPRSCRPEDVQVPFQKFGPVRDVYLPKDYNTGEPRGF 440
Query: 91 AYVEFLQSEAVQEA-LHLNESELHGRQLKVT 120
A+VEF S +A H+N L GR++ V
Sbjct: 441 AFVEFAHSSDASKARYHMNRKMLSGREISVA 471
>gi|118398866|ref|XP_001031760.1| RNA binding protein [Tetrahymena thermophila]
gi|89286093|gb|EAR84097.1| RNA binding protein [Tetrahymena thermophila SB210]
Length = 451
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 40 ANREEVD-SRSVFVGNVDYSCTPEEVQQHFQSCGTV-NRVTIRTDKFGQPKGYAYVEFLQ 97
AN + +D +R++FVGN+ + + E+++ HF+SCG + N IR K + KG+ YV F +
Sbjct: 174 ANEKILDYTRTIFVGNLHFKISEEQLRHHFESCGDILNVRVIRDPKTHEGKGFGYVFFKE 233
Query: 98 SEAVQEALHLNESELHGRQLKV 119
Q AL N ++L R+++V
Sbjct: 234 KTGFQNALEKNGTKLLEREIRV 255
Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 18/96 (18%)
Query: 42 REEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRT----------------DKF- 84
++E D R+VFVGN+ T ++ + F+ G + ++ IR+ KF
Sbjct: 76 KKEKDDRTVFVGNISLEATGSQIAKEFKQYGKIEKIWIRSVPVENSKMPKRASVILKKFK 135
Query: 85 -GQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
G + AY+ F E +++L N + L+V
Sbjct: 136 DGADRKNAYILFSTQEEAEKSLEANGKVFLEKHLRV 171
>gi|307202215|gb|EFN81702.1| Squamous cell carcinoma antigen recognized by T-cells 3
[Harpegnathos saltator]
Length = 907
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 41 NREEVDSR-SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSE 99
N++EVD+ +VFV N+DY+ T EEV+ + G + + D G+ KGY YV+ +E
Sbjct: 648 NQKEVDNNITVFVSNLDYTATEEEVRDALKLAGPITLFKMIKDYRGRSKGYCYVQLSNAE 707
Query: 100 AVQEALHLNESELHGRQLKVT 120
AV+ AL ++ + GR + V+
Sbjct: 708 AVEIALKMDRIAIRGRPMFVS 728
Score = 40.8 bits (94), Expect = 0.22, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 45 VDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFL-QSEAVQE 103
++ +FV + + T EE+++ F+ G + V + T + G KG AYVE+ ++ A +
Sbjct: 747 LEKNKLFVKGLPITTTKEELEEIFKIYGALKEVRLVTYRNGHSKGLAYVEYCDEATAAKA 806
Query: 104 ALHLNESELHGRQLKVTVKR 123
L ++ ++HG+ + V + +
Sbjct: 807 LLGIDGMKIHGKVISVAISQ 826
>gi|46105484|ref|XP_380546.1| hypothetical protein FG00370.1 [Gibberella zeae PH-1]
Length = 294
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEAL 105
SR VFVGN+ Y T E++ + F S G V R + D + G+PKG+ + ++ +++ A+
Sbjct: 7 SRVVFVGNIPYGLTEEQITEIFSSAGKVERFRLVYDSETGRPKGFGFADYPDTDSASSAV 66
Query: 106 -HLNESELHGRQLKV 119
+LN+ E+ GR+L+V
Sbjct: 67 RNLNDHEIMGRKLRV 81
>gi|408400674|gb|EKJ79751.1| hypothetical protein FPSE_00031 [Fusarium pseudograminearum CS3096]
Length = 295
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEAL 105
SR VFVGN+ Y T E++ + F S G V R + D + G+PKG+ + ++ +++ A+
Sbjct: 7 SRVVFVGNIPYGLTEEQITEIFSSAGKVERFRLVYDSETGRPKGFGFADYPDTDSASSAV 66
Query: 106 -HLNESELHGRQLKV 119
+LN+ E+ GR+L+V
Sbjct: 67 RNLNDHEIMGRKLRV 81
>gi|288940038|ref|YP_003442278.1| RNP-1 like RNA-binding protein [Allochromatium vinosum DSM 180]
gi|288895410|gb|ADC61246.1| RNP-1 like RNA-binding protein [Allochromatium vinosum DSM 180]
Length = 91
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEF-LQSEAVQEALH 106
+++VGN+ YS T +E++ F + G ++ V + TDKF G KG+ +VE SEA
Sbjct: 2 NIYVGNLAYSVTQDELRDAFGAYGEISSVNLITDKFTGSSKGFGFVEMPNNSEADAAIKG 61
Query: 107 LNESELHGRQLKVT 120
LNE+ L GR LKV
Sbjct: 62 LNETPLKGRNLKVN 75
>gi|396471523|ref|XP_003838892.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
gi|312215461|emb|CBX95413.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
Length = 490
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
Query: 29 KQDPAAG-----GSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK 83
+Q P AG + ++ S ++F+GN+ + CT + +Q+ F G + RV++ TD+
Sbjct: 313 RQKPDAGKTNDRANKYGDKRSAPSNTLFLGNLSFDCTNDSIQEIFAEYGNITRVSLPTDR 372
Query: 84 -FGQPKGYAYVEFLQSEAVQEALH-LNESELHGRQLKV 119
G KG+ YV+F E AL LN ++ GR +++
Sbjct: 373 DTGSIKGFGYVDFGSQEEATAALDALNGQDIAGRNIRI 410
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQS-EAVQEAL 105
+++FVGN+ ++ + +++ F+ G + I TD+ G+ KG+ YVEF S +A +
Sbjct: 234 KNLFVGNLSWNIDEDWLRREFEGFGEIVGCRIITDRETGRGKGFGYVEFATSADAAKAQA 293
Query: 106 HLNESELHGRQLKV 119
+++ EL GR L V
Sbjct: 294 EMHQYELDGRPLNV 307
>gi|282900575|ref|ZP_06308517.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
gi|281194375|gb|EFA69330.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
Length = 103
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL-- 105
S++VGN+ Y T E+++ F G V++V + TDK G+P+G+ +V+ + SEA + A
Sbjct: 2 SIYVGNLSYDVTLEDLKSAFSKYGNVSKVQLPTDKETGRPRGFGFVD-MSSEAEENAAID 60
Query: 106 HLNESELHGRQLKVTVKR 123
LN +E GRQLKV R
Sbjct: 61 ALNGAEWMGRQLKVNKAR 78
>gi|452821941|gb|EME28965.1| hypothetical protein Gasu_35400 [Galdieria sulphuraria]
Length = 279
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Query: 27 ASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQ 86
S+ P + + EE R V+VGN+ Y+ +E++ H + G V V + DK +
Sbjct: 76 VSESSPQGTDDNKVSIEERQKRRVYVGNIPYTVRWQEIKDHMREAGPVQYVHLFLDKLKR 135
Query: 87 PKGYAYVEFLQSEAVQEALH-LNESELHGRQLKVTVKRTNV 126
KG A VE++ EA Q+A+ LN S + GR L V R ++
Sbjct: 136 SKGSALVEYMTEEAAQKAVELLNNSVIAGRSLVVREDRGSI 176
>gi|380012874|ref|XP_003690499.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Apis florea]
Length = 902
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 41 NREEVDSRS-VFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSE 99
N E+D +S VF+ N+DY+ + EEV+ Q G + + D G+ KGY YV+ E
Sbjct: 652 NMHEMDDKSTVFISNLDYTASEEEVRNALQPAGPITMFKMIRDYKGRSKGYCYVQLSNIE 711
Query: 100 AVQEALHLNESELHGRQL---KVTVKRTNVPGMK 130
A+ +AL L+ + + GR + K RT G K
Sbjct: 712 AIDKALQLDRTPIRGRPMFVSKCDPNRTRGSGFK 745
Score = 42.7 bits (99), Expect = 0.062, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 28 SKQDP-AAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQ 86
SK DP GS ++ +FV + S T EE+++ F+ G + V I T + G
Sbjct: 732 SKCDPNRTRGSGFKYSCSLEKNKLFVKGLPVSTTKEELEEIFKVHGALKEVRIVTYRNGH 791
Query: 87 PKGYAYVEFLQSEAVQEAL 105
KG AYVEF+ + +AL
Sbjct: 792 SKGLAYVEFMDENSAAKAL 810
>gi|345566286|gb|EGX49229.1| hypothetical protein AOL_s00078g262 [Arthrobotrys oligospora ATCC
24927]
Length = 574
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 5/119 (4%)
Query: 38 SLANREEVDSRS-VFVGNVDYSCTPEEVQQHFQSCGTVNRVT-IRTDKFGQPKGYAYVEF 95
S+A+ + DSR VFVGN+D+ E + +HF +CG V V +R K KG+AYV+F
Sbjct: 380 SVAHPAKNDSRKCVFVGNLDFEAAEESLWKHFSTCGKVENVRLVRDAKTNVGKGFAYVQF 439
Query: 96 LQSEAVQEALHLNESELH---GRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIP 151
V++AL LNE + GR+ K+ V R K P + G +P
Sbjct: 440 ADDVDVEKALLLNEKPMEVEKGRKRKLRVTRAKNMRKKAVPDSAPGAVRSAKKNGVYVP 498
>gi|302845893|ref|XP_002954484.1| hypothetical protein VOLCADRAFT_106420 [Volvox carteri f.
nagariensis]
gi|300260156|gb|EFJ44377.1| hypothetical protein VOLCADRAFT_106420 [Volvox carteri f.
nagariensis]
Length = 393
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHL 107
+++ V + Y T +++++ F+ G + RV I TDK G+P+GYA++EF ++EA
Sbjct: 151 KTIIVARLSYDVTDKKLRREFEEFGPIKRVRIVTDKQGKPRGYAFIEFEHKADMKEAYKA 210
Query: 108 NES-ELHGRQLKVTVKRTNVPGMKQHRPRR 136
+ ++ GR++ V V+R ++ +PRR
Sbjct: 211 ADGKKIEGRRVLVDVERGRT--VENWKPRR 238
>gi|302926856|ref|XP_003054377.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735318|gb|EEU48664.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 294
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEAL 105
SR VFVGN+ Y T E++ + F S G V R + D + G+PKG+ + ++ +++ A+
Sbjct: 7 SRVVFVGNIPYGLTEEQITEIFSSAGKVERFRLVYDSETGRPKGFGFADYPDTDSASSAV 66
Query: 106 -HLNESELHGRQLKV 119
+LN+ E+ GR+L+V
Sbjct: 67 RNLNDYEIMGRKLRV 81
>gi|328783037|ref|XP_394225.4| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Apis mellifera]
Length = 910
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 41 NREEVDSRS-VFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSE 99
N E+D +S VF+ N+DY+ + EEV+ Q G + + D G+ KGY YV+ E
Sbjct: 657 NMNEMDDKSTVFISNLDYTASEEEVRNALQPAGPITMFKMIRDYKGRSKGYCYVQLSNIE 716
Query: 100 AVQEALHLNESELHGRQL---KVTVKRTNVPGMK 130
A+ +AL L+ + + GR + K RT G K
Sbjct: 717 AIDKALQLDRTPIRGRPMFVSKCDPNRTRGSGFK 750
>gi|146328793|ref|YP_001209360.1| RNA recognition motif-containing protein [Dichelobacter nodosus
VCS1703A]
gi|146232263|gb|ABQ13241.1| RNA recognition motif protein [Dichelobacter nodosus VCS1703A]
Length = 95
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH- 106
+++VGN+ Y T +E++ F G V +I D+ G+ KG+ +VE +EA ++A+
Sbjct: 3 NIYVGNLSYRTTEDELRNAFSQFGDVQNASIIKDRDSGRSKGFGFVEMPDAEAAKKAIES 62
Query: 107 LNESELHGRQLKVTVKRTNVPGMKQHRPRR 136
LN+ +L GR LK+ R ++ RPRR
Sbjct: 63 LNDKDLGGRNLKINEARP-----REMRPRR 87
>gi|268530138|ref|XP_002630195.1| Hypothetical protein CBG00602 [Caenorhabditis briggsae]
Length = 191
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 49/83 (59%)
Query: 42 REEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAV 101
++E+DSR+VFVGN+D + T E+++HF CG+V + G K + +VE + V
Sbjct: 58 QKELDSRTVFVGNIDVNTTAREIERHFDVCGSVKVRFVIDRSTGFQKNHCFVEIENALFV 117
Query: 102 QEALHLNESELHGRQLKVTVKRT 124
+ A LN + L+ R + V K++
Sbjct: 118 EFAFDLNGTTLNHRYITVRPKKS 140
>gi|383851135|ref|XP_003701095.1| PREDICTED: RNA-binding protein squid-like isoform 2 [Megachile
rotundata]
Length = 362
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 59/95 (62%), Gaps = 5/95 (5%)
Query: 24 NEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD- 82
N S++D + GG N++ ++ R +FVG + + T +E++ HF + G + + ++TD
Sbjct: 34 NGQESQEDRSTGG----NQDSLNDRKLFVGGLSWETTDKELRDHFGTYGDIESINVKTDP 89
Query: 83 KFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQL 117
G+ +G+A++ F ++E++ + + N+ ++G+++
Sbjct: 90 NTGRSRGFAFIVFAKAESLDKIMSANDHIINGKKV 124
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 50 VFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLN 108
+FVG + + E+++ F GT+ V + DK Q KG+ ++ F + V E L
Sbjct: 136 IFVGGLSTELSDEDIKNFFSQFGTIVDVEMPFDKTKNQRKGFCFITFESEQVVNELLKTP 195
Query: 109 ESELHGRQLKV 119
+ ++G+++ V
Sbjct: 196 KQTINGKEVDV 206
>gi|326523691|dbj|BAJ93016.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 244
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 58/104 (55%), Gaps = 2/104 (1%)
Query: 43 EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAV 101
EE+ +R ++VGN+ + T +E+ F + GTV R + DK+ G+ + + +V +E V
Sbjct: 64 EELATRKLYVGNIPRTVTNDELSAMFAAHGTVVRAEVMYDKYSGRSRRFGFVTMSTAEEV 123
Query: 102 QEALH-LNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQ 144
A+ LN++E+ GR++KV V + +P + P F+ Q
Sbjct: 124 AAAIESLNDTEVGGRKIKVNVTESFLPNIDASAPESEPSFVDSQ 167
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 45 VDSR-SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTI-RTDKFGQPKGYAYVEFLQSEAVQ 102
VDS+ V+VGN+ T E ++ F G V T+ R + KGY +V F E V+
Sbjct: 164 VDSQYKVYVGNLAKKVTTEVLKNFFSEKGEVLSATVSRIPGTPKSKGYGFVTFSSEEEVE 223
Query: 103 EALH-LNESELHGRQLKV 119
A+ N +EL G+ ++V
Sbjct: 224 AAVSTFNNTELEGQTIRV 241
>gi|115460618|ref|NP_001053909.1| Os04g0620700 [Oryza sativa Japonica Group]
gi|75327488|sp|Q7XTT4.2|NUCL2_ORYSJ RecName: Full=Nucleolin 2; AltName: Full=Protein NUCLEOLIN LIKE 2
gi|38344339|emb|CAD41755.2| OSJNBa0058K23.21 [Oryza sativa Japonica Group]
gi|113565480|dbj|BAF15823.1| Os04g0620700 [Oryza sativa Japonica Group]
gi|215737156|dbj|BAG96085.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 707
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 106
S+++FVGN+ Y+ E+V+Q FQ G V + T + G +G+ +VEF +EA ++AL
Sbjct: 448 SKTLFVGNLPYNVEQEQVKQFFQEAGEVVDIRFSTFEDGNFRGFGHVEFATAEAAKKALE 507
Query: 107 LNESELHGRQLKVTVKR 123
L +L GR +++ + R
Sbjct: 508 LAGHDLMGRPVRLDLAR 524
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 37 SSLANREEVDSRSVFVGNVDYSCTPEEV----QQHFQSCGTVNRVTIRTD-KFGQPKGYA 91
SS + ++F+ D S ++ ++HF SCG + RV+I D + G KG A
Sbjct: 538 SSFKKPAQSSGNTIFIKGFDTSLDIHQIRNSLEEHFGSCGEITRVSIPKDYETGASKGMA 597
Query: 92 YVEFLQSEAVQEALHLNESELHGRQLKVTVKR 123
Y++F + ++ +A LN S+L G L V R
Sbjct: 598 YMDFADNGSLSKAYELNGSDLGGYSLYVDEAR 629
>gi|253683404|ref|NP_001156572.1| RNA binding motif protein 34 [Acyrthosiphon pisum]
gi|239792368|dbj|BAH72536.1| ACYPI010185 [Acyrthosiphon pisum]
Length = 418
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTI-RTDKFGQPKGYAYVEFLQSEAVQEALH 106
+ +F+GN+ YS +E+ +F+ CGT++ V I R + G KG+ YV+F E+V+ A+
Sbjct: 281 KGIFIGNLPYSIQEDEIWDYFKDCGTISAVRIVRDNATGVSKGFGYVDFETKESVELAMQ 340
Query: 107 LNESELHGRQLKV 119
+ ++ R+++V
Sbjct: 341 IKGKKVQNREIRV 353
Score = 36.6 bits (83), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 44 EVDSRSVFVGNVDYSCTPEEVQQHFQSCGTV----------------NRVTIRTDKFGQP 87
E +SR+VFVGNV S V++ F+ G V RV+I F
Sbjct: 174 EKESRTVFVGNVPVSVKMSAVKKLFKQFGEVETTRLRSVAVKNLEVPKRVSIMKGDFHPQ 233
Query: 88 KGYA--YVEFLQSEAVQEALHLNESELHGRQLKV 119
+ A YV F E Q+AL LN ++ G ++V
Sbjct: 234 RDTANVYVRFKTIEEAQKALVLNATQFEGHTIRV 267
>gi|443722303|gb|ELU11225.1| hypothetical protein CAPTEDRAFT_227550 [Capitella teleta]
Length = 565
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 46 DSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEA 104
D RSVF+GN+ +EV+ HFQ CG V V + D+ G KG+ +V F AV A
Sbjct: 408 DKRSVFLGNLPLEVQEDEVRLHFQECGEVENVRLVRDRGTGIGKGFGFVLFKDVCAVDLA 467
Query: 105 LHLNESELHGRQLKV 119
L ++E GR+L+V
Sbjct: 468 LKMHEEVFRGRKLRV 482
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 21/116 (18%)
Query: 44 EVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPK--------------- 88
E D R+VF+GN+ +++ + F+ CG++ + R+ PK
Sbjct: 302 EADKRTVFIGNISLKAEKKDILKLFKGCGSIASIRFRSVTPSNPKLPKRAALITKDFHES 361
Query: 89 ---GYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFM 141
AY+ F + E+ +AL LN + L+V PG+K+ + + F+
Sbjct: 362 MASFNAYIVFKEQESATKALKLNGEKFLNFHLRVDSLH---PGVKKCHDDKRSVFL 414
>gi|308505902|ref|XP_003115134.1| CRE-EXO-3 protein [Caenorhabditis remanei]
gi|308259316|gb|EFP03269.1| CRE-EXO-3 protein [Caenorhabditis remanei]
Length = 334
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL-H 106
+V VGN Y T +E+ +F S G V V I D+ G+P+G+A+VEF + Q+A
Sbjct: 257 NVSVGNAAYQTTEQELGDYFSSVGQVTNVKIVCDRETGRPRGFAFVEFADEASAQKACEQ 316
Query: 107 LNESELHGRQLKVTV 121
LN ++ +GRQL+V +
Sbjct: 317 LNGADFNGRQLRVNL 331
>gi|383851133|ref|XP_003701094.1| PREDICTED: RNA-binding protein squid-like isoform 1 [Megachile
rotundata]
Length = 338
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 59/95 (62%), Gaps = 5/95 (5%)
Query: 24 NEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD- 82
N S++D + GG N++ ++ R +FVG + + T +E++ HF + G + + ++TD
Sbjct: 34 NGQESQEDRSTGG----NQDSLNDRKLFVGGLSWETTDKELRDHFGTYGDIESINVKTDP 89
Query: 83 KFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQL 117
G+ +G+A++ F ++E++ + + N+ ++G+++
Sbjct: 90 NTGRSRGFAFIVFAKAESLDKIMSANDHIINGKKV 124
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 50 VFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALHLN 108
+FVG + + E+++ F GT+ V + DK Q KG+ ++ F + V E L
Sbjct: 136 IFVGGLSTELSDEDIKNFFSQFGTIVDVEMPFDKTKNQRKGFCFITFESEQVVNELLKTP 195
Query: 109 ESELHGRQLKV 119
+ ++G+++ V
Sbjct: 196 KQTINGKEVDV 206
>gi|125591671|gb|EAZ32021.1| hypothetical protein OsJ_16200 [Oryza sativa Japonica Group]
Length = 728
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 106
S+++FVGN+ Y+ E+V+Q FQ G V + T + G +G+ +VEF +EA ++AL
Sbjct: 469 SKTLFVGNLPYNVEQEQVKQFFQEAGEVVDIRFSTFEDGNFRGFGHVEFATAEAAKKALE 528
Query: 107 LNESELHGRQLKVTVKR 123
L +L GR +++ + R
Sbjct: 529 LAGHDLMGRPVRLDLAR 545
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 37 SSLANREEVDSRSVFVGNVDYSCTPEEV----QQHFQSCGTVNRVTIRTD-KFGQPKGYA 91
SS + ++F+ D S ++ ++HF SCG + RV+I D + G KG A
Sbjct: 559 SSFKKPAQSSGNTIFIKGFDTSLDIHQIRNSLEEHFGSCGEITRVSIPKDYETGASKGMA 618
Query: 92 YVEFLQSEAVQEALHLNESELHGRQLKVTVKR 123
Y++F + ++ +A LN S+L G L V R
Sbjct: 619 YMDFADNGSLSKAYELNGSDLGGYSLYVDEAR 650
>gi|302696625|ref|XP_003037991.1| hypothetical protein SCHCODRAFT_47280 [Schizophyllum commune H4-8]
gi|300111688|gb|EFJ03089.1| hypothetical protein SCHCODRAFT_47280 [Schizophyllum commune H4-8]
Length = 449
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 6/104 (5%)
Query: 22 VGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRT 81
V + A K+ A G + ++ SV+VGN+ + T ++++ F+ G V R+ + T
Sbjct: 74 VEDGSAPKKRKLANGQAAVDQPTKRQNSVWVGNMSFKTTQDDLRSFFKEAGEVTRINMPT 133
Query: 82 DKFGQP------KGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
G+P KGYAYV+F EA A+ L+E L GR+L +
Sbjct: 134 KPSGRPGGSIENKGYAYVDFATPEAKAAAIALSEHPLIGRKLLI 177
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 26/113 (23%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQS----CGTVNRVTIRTDKFGQP----------------- 87
++FVGN+ + T E++QQ F+S + ++T+ +P
Sbjct: 220 TLFVGNLSFETTVEDLQQMFESHRPAKDKAKKSEVKTESGAEPPQPWLRKVRMATFEDTG 279
Query: 88 --KGYAYVEFLQSEAVQEAL-HLNESELHGRQLKVTVKRTNVPGMKQHRPRRP 137
KG+A+++F E +EAL + L+GR L+V + +++ PR+P
Sbjct: 280 KCKGFAFIDFGTKEYAEEALINPRNHHLNGRDLQVEF--ASAEAVRRGAPRQP 330
>gi|195612514|gb|ACG28087.1| hypothetical protein [Zea mays]
gi|413938967|gb|AFW73518.1| hypothetical protein ZEAMMB73_612183 [Zea mays]
Length = 93
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 39/54 (72%), Gaps = 3/54 (5%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGN 54
MK RLKEMEEEA ALR M AKV EM DP+A S+ +E+VD+RSV+VGN
Sbjct: 42 MKRRLKEMEEEAAALRDMQAKVAKEMQGG-DPSA--STAEAKEQVDARSVYVGN 92
>gi|242003014|ref|XP_002422579.1| squamous cell carcinoma antigen, putative [Pediculus humanus
corporis]
gi|212505369|gb|EEB09841.1| squamous cell carcinoma antigen, putative [Pediculus humanus
corporis]
Length = 858
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 53/97 (54%)
Query: 24 NEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK 83
+++ + A G ++ ++ D R+VFV N+D++ + +++ F CG + + + D
Sbjct: 578 DKLLRGESKTAHGETVVHQSSKDHRTVFVSNLDFTTEEDVIRETFSCCGEITDLRLVRDY 637
Query: 84 FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
G+ KGY YVEF +S AL + ++GR + V+
Sbjct: 638 KGRSKGYCYVEFEKSVEAARALKKDRELINGRPMFVS 674
>gi|115486805|ref|NP_001068546.1| Os11g0704700 [Oryza sativa Japonica Group]
gi|62733154|gb|AAX95271.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative
[Oryza sativa Japonica Group]
gi|77552711|gb|ABA95508.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113645768|dbj|BAF28909.1| Os11g0704700 [Oryza sativa Japonica Group]
Length = 502
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQ-SEAVQEALH 106
S+FV N+ SC PE+VQ FQ G V V + D G+P+G+A+VEF S+A + H
Sbjct: 36 SLFVSNLPRSCRPEDVQVPFQKFGPVRDVYLPKDYNTGEPRGFAFVEFAHSSDASKARYH 95
Query: 107 LNESELHGRQLKV 119
+N L GR++ V
Sbjct: 96 MNRKMLSGREISV 108
>gi|241781520|ref|XP_002400282.1| 29 kDa ribonucleoprotein B, putative [Ixodes scapularis]
gi|215510713|gb|EEC20166.1| 29 kDa ribonucleoprotein B, putative [Ixodes scapularis]
Length = 364
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQ-SEAVQEAL 105
S +FV N+DY T +++Q+ F+ G V V +RTDK G KG+ VEF EAVQ
Sbjct: 143 SNRIFVANLDYKVTSKKLQEIFRLAGRVINVDLRTDKDGNSKGHGIVEFDHPIEAVQAIS 202
Query: 106 HLNESELHGRQLKVTVKRTN 125
N +L+ R + V + + N
Sbjct: 203 MFNGQKLYSRSMSVRMDKYN 222
>gi|238566092|ref|XP_002385995.1| hypothetical protein MPER_15952 [Moniliophthora perniciosa FA553]
gi|215436602|gb|EEB86925.1| hypothetical protein MPER_15952 [Moniliophthora perniciosa FA553]
Length = 110
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 6/106 (5%)
Query: 17 QMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNR 76
++ K G E A K+ A G+S + SV+VGN+ + TP+ +++ F+ G + R
Sbjct: 5 KLAEKQGQEPAIKKRKLADGTSSNSSAPKRQNSVWVGNLSFKTTPDALRKFFEDVGEITR 64
Query: 77 VTI------RTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQ 116
+ + R G+ +G+AYV+F +A A+ L+E L+GR+
Sbjct: 65 IHMPMKFVSRPGGLGENRGFAYVDFATPDAKTVAVTLSEKPLNGRK 110
>gi|452845187|gb|EME47120.1| hypothetical protein DOTSEDRAFT_145507 [Dothistroma septosporum
NZE10]
Length = 571
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFG-QPKGYAYVEFLQSEAVQEALHL 107
+ +GN+DY+ T +++ + C +V V I DK +PKG+ YVEF E + +AL
Sbjct: 106 TAHLGNLDYNVTSVDIEGFLEGC-SVTTVRIMEDKIDRKPKGFGYVEFANPEGLTKALSK 164
Query: 108 NESELHGRQLKVTV 121
+ES GR +K++V
Sbjct: 165 SESSFMGRNIKISV 178
>gi|324514401|gb|ADY45855.1| Cleavage stimulation factor subunit 2 [Ascaris suum]
Length = 324
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 26 MASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-F 84
MA + A + + + +RSVFVGN+ Y E+++Q F G V + + D+
Sbjct: 1 MAFRDREGAASKTSTSSADRSARSVFVGNISYEVGEEQLKQVFSQVGPVVHLRLVHDRET 60
Query: 85 GQPKGYAYVEFLQSEAVQEAL-HLNESELHGRQLKV 119
G+PKGY + E+ + + A+ +LN EL+GRQL+V
Sbjct: 61 GKPKGYGFCEYNDPQTAESAIRNLNGYELNGRQLRV 96
>gi|116309951|emb|CAH66982.1| H0714H04.9 [Oryza sativa Indica Group]
Length = 704
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 106
S+++FVGN+ Y+ E+V+Q FQ G V + T + G +G+ +VEF +EA ++AL
Sbjct: 445 SKTLFVGNLPYNVEQEQVKQFFQEAGEVVDIRFSTFEDGNFRGFGHVEFATAEAAKKALE 504
Query: 107 LNESELHGRQLKVTVKR 123
L +L GR +++ + R
Sbjct: 505 LAGHDLMGRPVRLDLAR 521
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 37 SSLANREEVDSRSVFVGNVDYSCTPEEV----QQHFQSCGTVNRVTIRTD-KFGQPKGYA 91
SS + ++F+ D S ++ ++HF SCG + RV+I D + G KG A
Sbjct: 535 SSFKKPAQSSGNTIFIKGFDTSLDIHQIRNSLEEHFGSCGEITRVSIPRDYETGASKGMA 594
Query: 92 YVEFLQSEAVQEALHLNESELHGRQLKVTVKR 123
Y++F + ++ +A LN S+L G L V R
Sbjct: 595 YMDFADNGSLSKAYELNGSDLGGYSLYVDEAR 626
>gi|428203095|ref|YP_007081684.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
gi|427980527|gb|AFY78127.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
Length = 99
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEF-LQSEAVQEALH 106
S++VGN+ Y T E++++ F+ GTVNRV + TD+ G+P+G+A+VE ++E
Sbjct: 2 SIYVGNLSYEVTQEDLERVFKEYGTVNRVQMPTDRETGRPRGFAFVEMGTEAEETTAIEA 61
Query: 107 LNESELHGRQLKV 119
L+ ++ GR LKV
Sbjct: 62 LDGAQWMGRDLKV 74
>gi|358378081|gb|EHK15764.1| hypothetical protein TRIVIDRAFT_38275 [Trichoderma virens Gv29-8]
Length = 300
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEAL 105
SR VFVGN+ Y + E++ F S G V R + D + G+PKG+ + ++ +++ A+
Sbjct: 7 SRVVFVGNIPYGLSEEQITDIFSSAGKVERFRLVYDSETGRPKGFGFADYPDTDSASSAV 66
Query: 106 -HLNESELHGRQLKV 119
+LNE E+ GR+L+V
Sbjct: 67 RNLNEYEIMGRKLRV 81
>gi|323448546|gb|EGB04443.1| hypothetical protein AURANDRAFT_32583 [Aureococcus anophagefferens]
Length = 240
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQ-SEAVQEAL 105
+R V+VGN+ + + ++++ HF+ CG+V + ++ G+ KG+ VEF EAV
Sbjct: 157 ARRVYVGNLAWGTSWQDLKDHFRQCGSVVHAKVMEERPGRSKGWGIVEFEAPEEAVAAIE 216
Query: 106 HLNESELHGRQLKVTVKRTN 125
LN+S+L GR ++V R +
Sbjct: 217 QLNDSDLDGRPIQVREDRED 236
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 106
+R VFVGN+ + + ++++ HF+ CGTV ++ ++ G+ KG VEF ++ A+
Sbjct: 24 ARRVFVGNLSWQTSWQDLKDHFRQCGTVVHASVMEERPGRSKGCGIVEFESADEAALAIE 83
Query: 107 -LNESELHGRQLKVTVKRTN 125
L++ EL GR ++V R +
Sbjct: 84 TLHDVELDGRPVQVREDRED 103
>gi|358391586|gb|EHK40990.1| hypothetical protein TRIATDRAFT_249243 [Trichoderma atroviride IMI
206040]
Length = 300
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEAL 105
SR VFVGN+ Y + E++ F S G V R + D + G+PKG+ + ++ +++ A+
Sbjct: 7 SRVVFVGNIPYGLSEEQITDIFSSAGKVERFRLVYDSETGRPKGFGFADYPDTDSASSAV 66
Query: 106 -HLNESELHGRQLKV 119
+LNE E+ GR+L+V
Sbjct: 67 RNLNEYEIMGRKLRV 81
>gi|215734873|dbj|BAG95595.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQ-SEAVQEALH 106
S+FV N+ SC PE+VQ FQ G V V + D G+P+G+A+VEF S+A + H
Sbjct: 36 SLFVSNLPRSCRPEDVQVPFQKFGPVRDVYLPKDYNTGEPRGFAFVEFAHSSDASKARYH 95
Query: 107 LNESELHGRQLKV 119
+N L GR++ V
Sbjct: 96 MNRKMLSGREISV 108
>gi|308504790|ref|XP_003114578.1| hypothetical protein CRE_28336 [Caenorhabditis remanei]
gi|308258760|gb|EFP02713.1| hypothetical protein CRE_28336 [Caenorhabditis remanei]
Length = 84
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL-H 106
SV+VGN Y T +E+ +F + G V V I D+ G+P+G+A+VEF Q A
Sbjct: 7 SVYVGNATYQTTEQELGDYFSTVGQVTNVRIVCDRETGRPRGFAFVEFADEAGAQRACDQ 66
Query: 107 LNESELHGRQLKVTV 121
LN + +GRQL+V +
Sbjct: 67 LNGVDFNGRQLRVNL 81
>gi|296804682|ref|XP_002843192.1| nucleolar protein 13 [Arthroderma otae CBS 113480]
gi|238845794|gb|EEQ35456.1| nucleolar protein 13 [Arthroderma otae CBS 113480]
Length = 381
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRT-DKFGQPKGYAYVEFLQSEAVQEAL 105
S +FVGN+ + T E+++ HF CGTV+ V + T + G+ KGYA+VEF +E+ Q A+
Sbjct: 193 STKIFVGNLSFDTTKEDLEAHFGPCGTVSHVHVATFEDSGKCKGYAWVEFESTESSQAAV 252
>gi|146165272|ref|XP_001014712.2| hypothetical protein TTHERM_00047170 [Tetrahymena thermophila]
gi|146145520|gb|EAR94568.2| hypothetical protein TTHERM_00047170 [Tetrahymena thermophila
SB210]
Length = 261
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 9/117 (7%)
Query: 10 EEATALRQMHAKVGNEMASKQDPAAGGSSLANREEV----DSRSVFVGNVDYSCTPEEVQ 65
EEA +++ +V N A G + + +V D ++FV N+ + CT +EV
Sbjct: 76 EEAQEAIKLNKQVMNGRYLDISLAKGEKKVEYKNDVKAPEDCTTIFVKNLAFDCTEDEVG 135
Query: 66 QHFQSCGTVNRVTIR-TDKFGQP--KGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
+ F+ CG V V +R + Q KG+A++EF + +V AL LN +E GR+L +
Sbjct: 136 EFFEKCGKV--VNVRFVYHYSQKHFKGFAFIEFKMNSSVNAALKLNGTEFKGRKLTI 190
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTI-RTDKFGQPKGYAYVEFLQSEAVQEALH 106
RSVFV + YS + ++++FQ+CGT+ + + R G+ GY ++ F E QEA+
Sbjct: 24 RSVFVSGLPYSADTDAIKEYFQNCGTIENIKLPRYQDTGKIIGYCHLVFSTPEEAQEAIK 83
Query: 107 LNESELHGRQLKVTVKR 123
LN+ ++GR L +++ +
Sbjct: 84 LNKQVMNGRYLDISLAK 100
>gi|195054168|ref|XP_001993998.1| GH17992 [Drosophila grimshawi]
gi|193895868|gb|EDV94734.1| GH17992 [Drosophila grimshawi]
Length = 444
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 48/88 (54%)
Query: 46 DSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEAL 105
+ R++FVGN+ YS E++++ F SCG ++ + D KG AYV F Q +AV AL
Sbjct: 272 NKRTIFVGNLKYSANEEKLREIFSSCGEIDYIRCLHDGERGCKGVAYVCFQQPDAVGLAL 331
Query: 106 HLNESELHGRQLKVTVKRTNVPGMKQHR 133
LNE+ L R + V G KQ R
Sbjct: 332 ELNETMLDERPIHVERYAVKKLGAKQAR 359
Score = 36.6 bits (83), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 21/115 (18%)
Query: 16 RQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVN 75
R+ + K +E+ ++DPAA ++ ++F+GN+ + ++ + Q GTVN
Sbjct: 144 RKTNDKDEDEVKRERDPAA-----------EAATIFIGNLPINTKRVQLVRLLQPFGTVN 192
Query: 76 RVTIRTD------KFGQPKGY----AYVEFLQSEAVQEALHLNESELHGRQLKVT 120
+ +RT K Q K AYV ++ ++AL LN +E L+VT
Sbjct: 193 SIRLRTAGGKHLFKHKQRKEAGSLNAYVVLNSAQVAEKALALNGTEFKENHLRVT 247
>gi|196013474|ref|XP_002116598.1| hypothetical protein TRIADDRAFT_60544 [Trichoplax adhaerens]
gi|190580874|gb|EDV20954.1| hypothetical protein TRIADDRAFT_60544 [Trichoplax adhaerens]
Length = 164
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%)
Query: 50 VFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNE 109
+F+GN+ YS T E++ +HF+ CG +V + T K G P+G A++E + Q+AL +
Sbjct: 63 LFLGNLSYSTTDEDILKHFKKCGHNLQVRLLTKKDGSPRGCAFLEAFRYADYQKALKYHH 122
Query: 110 SELHGRQLKVTV 121
+ L+ R++ V V
Sbjct: 123 TSLNERKINVEV 134
>gi|125549781|gb|EAY95603.1| hypothetical protein OsI_17455 [Oryza sativa Indica Group]
Length = 667
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 106
S+++FVGN+ Y+ E+V+Q FQ G V + T + G +G+ +VEF +EA ++AL
Sbjct: 435 SKTLFVGNLPYNVEQEQVKQFFQEAGEVVDIRFSTFEDGNFRGFGHVEFATAEAAKKALE 494
Query: 107 LNESELHGRQLKVTVKR 123
L +L GR +++ + R
Sbjct: 495 LAGHDLMGRPVRLDLAR 511
>gi|168009804|ref|XP_001757595.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691289|gb|EDQ77652.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 455
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH 106
S+++FV N+ ++ ++V + F CGTV V I D G+ +G+ +VEF EA Q+AL
Sbjct: 171 SKTLFVKNLAWAADQDKVFEFFSDCGTVADVRIAQDDNGRSRGFGHVEFETEEAAQKALQ 230
Query: 107 LNESELHGRQLKVTVKR 123
+ L GR + + R
Sbjct: 231 KSGQNLEGRDIFCDLAR 247
>gi|358399302|gb|EHK48645.1| hypothetical protein TRIATDRAFT_281461 [Trichoderma atroviride IMI
206040]
Length = 580
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 12/110 (10%)
Query: 19 HAKVGNEMASKQDPAAGGSSLANREEVDSR-------SVFVGNVDYSCTPEEVQQHFQSC 71
A+ G M+S QD + RE V S+ + +GN+ Y T E V F+ C
Sbjct: 48 SARSGGGMSSWQD-----RGYSVRESVPSKIPDRPPYTAHLGNLSYDATSESVSGFFEGC 102
Query: 72 GTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV 121
V+ I + +PKG+ YVEF E +++AL L+ GR +K+ V
Sbjct: 103 DVVSVRIIEDRELQRPKGFGYVEFGNVEGLKKALDLDGESFEGRMIKIKV 152
>gi|302803765|ref|XP_002983635.1| hypothetical protein SELMODRAFT_234317 [Selaginella moellendorffii]
gi|300148472|gb|EFJ15131.1| hypothetical protein SELMODRAFT_234317 [Selaginella moellendorffii]
Length = 573
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 27 ASKQDPAAGGSSL----ANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD 82
A+KQ PA+ L +E +S+++FV N+ +S T E++ Q+F+ G V V I
Sbjct: 291 AAKQAPASKKQKLEVKTPAKEGGESKTLFVRNIPFSVTDEDLAQYFEDAGEVVGVRIAQG 350
Query: 83 KFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV---KRTNVPGMKQHRP 134
G PKG+A+VEF A Q+AL+ + ++ GR++ + + T G K+ RP
Sbjct: 351 DNG-PKGFAHVEFSTEAAAQKALNKSGQDMGGRRIYCDLANPRGTPASGPKRDRP 404
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 62 EEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
+ + +HF+SCGT+ RV I TD+ G KG+AY+EF A +A L+ S+L G L V
Sbjct: 435 DSLTKHFKSCGTIERVKIPTDRETGNIKGFAYIEFSTDGAPAKAKELHGSDLDGSNLVV 493
>gi|341882525|gb|EGT38460.1| hypothetical protein CAEBREN_15135 [Caenorhabditis brenneri]
Length = 84
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH- 106
SV+VGN Y + +E+ F + G V V I D+ G+P+G+A+VEF Q A++
Sbjct: 7 SVYVGNAPYQTSEDEIGSFFSNVGHVTNVRIVCDRETGRPRGFAFVEFADEAGAQRAVNE 66
Query: 107 LNESELHGRQLKVTV 121
LN ++ +GRQL+V +
Sbjct: 67 LNGADFNGRQLRVNL 81
>gi|327274927|ref|XP_003222226.1| PREDICTED: deleted in azoospermia-like [Anolis carolinensis]
Length = 308
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 88/199 (44%), Gaps = 33/199 (16%)
Query: 7 EMEEEATALRQMHAKVGNEMA---------SKQDPAAGGSSLANREEVDSRSVFVGNVDY 57
E +E A+ +++ GN+ A S Q PA + ++ +VFVG +D
Sbjct: 9 EQKENASEIKE---SAGNQDAQNTSIPWDESTQLPATSQGYVLPEGKIMPNTVFVGGIDI 65
Query: 58 SCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQL 117
E++ F GTV V I TD+ G KGY +V FL + VQ+ + ++ HG++L
Sbjct: 66 RMDETEIRNFFARYGTVKEVKIITDRTGVSKGYGFVSFLDNVDVQKIVE-SQINFHGKKL 124
Query: 118 KVTVKRTNVPGM-KQHRPRRP----NPFMVYQS-----RGAIIPPFLYSP-------YGY 160
K+ P + H P RP +P + S + PP + SP Y Y
Sbjct: 125 KLGPAIRKHPNLCAYHVPPRPVLINSPTPQFHSVWNNQETYMQPPAMMSPVTQYIQTYPY 184
Query: 161 GK---IPRFRMPMRYSPYY 176
G + + ++PM Y P Y
Sbjct: 185 GSPALLIQHQVPMGYQPTY 203
>gi|24584762|ref|NP_609822.1| CG12288 [Drosophila melanogaster]
gi|7298360|gb|AAF53587.1| CG12288 [Drosophila melanogaster]
Length = 435
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHL 107
R++FVG++ YS T E++++ F SCG ++ + D KG AYV F + +AV AL L
Sbjct: 260 RTIFVGSLKYSATEEQLREIFSSCGEIDYIRCLQDGDKGCKGVAYVCFQKPDAVGLALEL 319
Query: 108 NESELHGRQLKVTVKRTNVPGMKQHR 133
N++ L R + V + G KQ R
Sbjct: 320 NQTLLDDRPINVERYQVKKLGAKQVR 345
>gi|45383684|ref|NP_989549.1| deleted in azoospermia-like [Gallus gallus]
gi|44887839|sp|Q804A9.1|DAZL_CHICK RecName: Full=Deleted in azoospermia-like; Short=DAZ-like protein
gi|28136293|gb|AAO26019.1| deleted azoospermia-like protein [Gallus gallus]
Length = 289
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLN 108
+VFVG +D E++ +F+ GTV V I TD+ G KGY +V FL + VQ+ + +
Sbjct: 37 TVFVGGIDIRMNEAEIRSYFEQYGTVKEVKIITDRTGVSKGYGFVSFLDNVDVQKIVE-S 95
Query: 109 ESELHGRQLKV---TVKRTNVPGMKQHRPRRPNP 139
+ +HG++LK+ K+ N+ Q RP NP
Sbjct: 96 QISVHGKRLKLGPAIRKQQNLCSYMQPRPLAFNP 129
>gi|341883256|gb|EGT39191.1| hypothetical protein CAEBREN_30504 [Caenorhabditis brenneri]
Length = 169
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 42 REEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEA 100
++E+DSRS+FV N+D T + +++ + CG++ + I+ D K G K + +VEF+ ++
Sbjct: 46 QKEIDSRSIFVSNLDPKMTEDLIRRCLECCGSIKSIHIQRDSKTGVSKRFCFVEFVMEDS 105
Query: 101 VQEALHLNESELHGRQLKVTVKRTN 125
V AL LN + G ++ K+++
Sbjct: 106 VDIALPLNGTRFKGNLFYISRKKSS 130
>gi|195344626|ref|XP_002038882.1| GM17146 [Drosophila sechellia]
gi|194134012|gb|EDW55528.1| GM17146 [Drosophila sechellia]
Length = 436
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHL 107
R++FVG++ YS T E++++ F SCG ++ + D KG AYV F + +AV AL L
Sbjct: 261 RTIFVGSLKYSATEEQLREIFSSCGEIDYIRCLQDGDKGCKGVAYVCFQKPDAVGLALEL 320
Query: 108 NESELHGRQLKVTVKRTNVPGMKQHR 133
N++ L R + V + G KQ R
Sbjct: 321 NQTLLDDRPINVERYQVKKLGAKQVR 346
>gi|344338389|ref|ZP_08769321.1| RNP-1 like RNA-binding protein [Thiocapsa marina 5811]
gi|343801671|gb|EGV19613.1| RNP-1 like RNA-binding protein [Thiocapsa marina 5811]
Length = 90
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEF-LQSEAVQEALH 106
+++VGN+ Y T +E++ F + G ++ V + TDKF G+ KG+ +VE SEA
Sbjct: 2 NIYVGNLAYGVTQDELKTAFSAYGEISSVNLITDKFTGESKGFGFVEMPNNSEADAAIKG 61
Query: 107 LNESELHGRQLKVT 120
LNE+ L GR LKV
Sbjct: 62 LNETPLKGRNLKVN 75
>gi|119485430|ref|ZP_01619758.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
gi|119457186|gb|EAW38312.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
Length = 100
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH- 106
SV+VGN+ Y T E+++ F GTV +V+I TD+ G+P+G+A+VE Q A+
Sbjct: 2 SVYVGNLSYQVTEEDLRSVFAEYGTVKQVSIPTDRETGRPRGFAFVEMDADTQEQAAIEK 61
Query: 107 LNESELHGRQLKVTVKR 123
L+ +E GR LKV R
Sbjct: 62 LDGAEWMGRDLKVNKAR 78
>gi|390949102|ref|YP_006412861.1| RRM domain-containing RNA-binding protein [Thiocystis violascens
DSM 198]
gi|390425671|gb|AFL72736.1| RRM domain-containing RNA-binding protein [Thiocystis violascens
DSM 198]
Length = 90
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEALH- 106
+++VGN+ Y T EE++ F + G ++ V + TDKF G KG+ +VE + A+
Sbjct: 2 NIYVGNLAYGVTQEELRDAFGAYGEISSVNLITDKFTGDSKGFGFVEMPNNAEADAAIKG 61
Query: 107 LNESELHGRQLKVT 120
LNE+ L GR LKV
Sbjct: 62 LNETPLKGRNLKVN 75
>gi|195483935|ref|XP_002090493.1| GE13151 [Drosophila yakuba]
gi|194176594|gb|EDW90205.1| GE13151 [Drosophila yakuba]
Length = 433
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHL 107
R++FVG++ YS T E++++ F SCG ++ + D KG AYV F + +AV AL L
Sbjct: 258 RTIFVGSLKYSATEEQLREIFSSCGEIDYIRCLQDGDKGCKGVAYVCFQKPDAVGLALEL 317
Query: 108 NESELHGRQLKVTVKRTNVPGMKQHR 133
N++ L R + V + G KQ R
Sbjct: 318 NQTLLDDRPINVERYQVKKLGAKQVR 343
>gi|83643344|ref|YP_431779.1| RNA-binding protein [Hahella chejuensis KCTC 2396]
gi|83631387|gb|ABC27354.1| RNA-binding protein (RRM domain) [Hahella chejuensis KCTC 2396]
Length = 92
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 53/90 (58%), Gaps = 7/90 (7%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH- 106
+++VGN+ Y T +++++ F + G ++ V I D+ GQ KG+ +VE + +EA+
Sbjct: 2 NIYVGNLSYQVTEDDLREAFAAYGDISNVNIIRDRDTGQSKGFGFVEMSDNGQAEEAIQK 61
Query: 107 LNESELHGRQLKVTVKRTNVPGMKQHRPRR 136
LNES L GR +KV R ++ +P+R
Sbjct: 62 LNESNLKGRNMKVNEARP-----REEKPKR 86
>gi|294882178|ref|XP_002769641.1| glycine-rich RNA-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239873203|gb|EER02359.1| glycine-rich RNA-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 88
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 31/43 (72%)
Query: 86 QPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPG 128
PKG+AY+EF AVQ AL LN++ GRQLKV KRTN+PG
Sbjct: 2 HPKGFAYIEFGDEAAVQNALLLNDTMFRGRQLKVLQKRTNLPG 44
>gi|156839481|ref|XP_001643431.1| hypothetical protein Kpol_487p6 [Vanderwaltozyma polyspora DSM
70294]
gi|156114041|gb|EDO15573.1| hypothetical protein Kpol_487p6 [Vanderwaltozyma polyspora DSM
70294]
Length = 376
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEAL- 105
+ SVFVGN+ Y CTPE+++ HF + G V R I T + G +G VEF ++ V EA+
Sbjct: 67 ANSVFVGNLTYDCTPEDLRDHFSTIGEVVRADIITSR-GHHRGMGTVEFTNADDVNEAIS 125
Query: 106 HLNESELHGRQLKVTVKRTNVPGMKQH 132
+ S L RQ + V++ N P H
Sbjct: 126 QYDGSYLLDRQ--IFVRQDNPPPEASH 150
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 50 VFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHL-N 108
VF+ N+ YS + ++ F+ CG+V R + D+ G +G+ V E ++ A+ + N
Sbjct: 178 VFIANLPYSINWQALKDMFKECGSVIRADVELDRNGYSRGFGTVILGSQEDMERAISMYN 237
Query: 109 ESELHGRQLKVTVKRTN 125
EL GR L+V R+N
Sbjct: 238 GYELEGRVLEVREGRSN 254
>gi|21430048|gb|AAM50702.1| GM13065p [Drosophila melanogaster]
Length = 435
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHL 107
R++FVG++ YS T E++++ F SCG ++ + D KG AYV F + +AV AL L
Sbjct: 260 RTIFVGSLKYSATEEQLREIFSSCGEIDYIRCLQDGDKGCKGVAYVCFQKPDAVGLALEL 319
Query: 108 NESELHGRQLKVTVKRTNVPGMKQHR 133
N++ L R + V + G KQ R
Sbjct: 320 NQTLLDDRPINVERYQVKKLGAKQVR 345
>gi|195579698|ref|XP_002079698.1| GD21886 [Drosophila simulans]
gi|194191707|gb|EDX05283.1| GD21886 [Drosophila simulans]
Length = 436
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHL 107
R++FVG++ YS T E++++ F SCG ++ + D KG AYV F + +AV AL L
Sbjct: 261 RTIFVGSLKYSATEEQLREIFSSCGEIDYIRCLQDGDKGCKGVAYVCFQKPDAVGLALEL 320
Query: 108 NESELHGRQLKVTVKRTNVPGMKQHR 133
N++ L R + V + G KQ R
Sbjct: 321 NQTLLDDRPINVERYQVKKLGAKQVR 346
>gi|425780634|gb|EKV18640.1| Translation initiation factor 4B [Penicillium digitatum PHI26]
Length = 497
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQ-PKGYAYVEFLQSEAVQEALHL 107
+ VGN+ + T ++ + F CG N V + DK + PKG+ YVEF E +Q+AL L
Sbjct: 84 TCHVGNLSFESTDADISEFFAGCGVTN-VRLVEDKLTKAPKGFGYVEFETVEGLQKALDL 142
Query: 108 NESELHGRQLKVTV 121
+ S GR ++ +V
Sbjct: 143 SGSSFQGRSIRTSV 156
>gi|365991834|ref|XP_003672745.1| hypothetical protein NDAI_0L00170 [Naumovozyma dairenensis CBS 421]
gi|410729717|ref|XP_003671037.2| hypothetical protein NDAI_0G00180 [Naumovozyma dairenensis CBS 421]
gi|401779856|emb|CCD25794.2| hypothetical protein NDAI_0G00180 [Naumovozyma dairenensis CBS 421]
Length = 464
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 61/126 (48%), Gaps = 9/126 (7%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEAL- 105
S S+FVGN+ Y CTPE+++++F G V R I T K G +G VEF S+ V++A+
Sbjct: 109 SNSIFVGNLTYDCTPEDLREYFSGIGEVVRADIITSK-GHHRGMGTVEFTNSKDVEDAIR 167
Query: 106 HLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKIPR 165
+ S RQ+ V R + P R R + + SRG S Y + P
Sbjct: 168 QYDGSYFLDRQIFV---RQDNPPPDGGRSSRRSDESISSSRGYQDK----SSSSYDRAPS 220
Query: 166 FRMPMR 171
R P R
Sbjct: 221 TRQPNR 226
Score = 42.7 bits (99), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 50 VFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEAL-HLN 108
VF+ N+ +S + ++ F+ G V R I D G+ +G+ V + A+++A+ LN
Sbjct: 231 VFIANLPFSINWQALKDMFKEFGDVLRADIELDSRGRSRGFGTVILREKSAMEKAIATLN 290
Query: 109 ESELHGRQLKV 119
+E+ GR++ V
Sbjct: 291 GTEMEGRRIDV 301
>gi|156392403|ref|XP_001636038.1| predicted protein [Nematostella vectensis]
gi|156223137|gb|EDO43975.1| predicted protein [Nematostella vectensis]
Length = 686
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 57/109 (52%), Gaps = 2/109 (1%)
Query: 40 ANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSE 99
AN+ E R+VFV N+D T E + F SCG + + + D G+P YAY+EF +++
Sbjct: 153 ANKVEEIRRTVFVNNLDPEITAEMLLSFFSSCGDIKYIRMGGDD-GKPTRYAYIEFAETQ 211
Query: 100 AVQEALHLNESELHGRQLKVTVKRTNVPG-MKQHRPRRPNPFMVYQSRG 147
A+ AL + + G+ +KVT + V +H R+ F V+ G
Sbjct: 212 AIVSALQYSGAIFGGKPIKVTHSKNAVSKPPPKHSDRKRACFGVFNGMG 260
>gi|405960659|gb|EKC26560.1| hypothetical protein CGI_10004059 [Crassostrea gigas]
Length = 219
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 50 VFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLN 108
+FVGN+ YS T E++++HF+ G V V I +K G+ KG+AYVEF + AL L+
Sbjct: 115 LFVGNLPYSVTKEQLEEHFRKTGGVKAVRIPKEKGTGKSKGFAYVEFKNRISHGIALRLH 174
Query: 109 ESELHGRQLKV 119
+ L GR++ V
Sbjct: 175 HTTLGGRKINV 185
>gi|444315572|ref|XP_004178443.1| hypothetical protein TBLA_0B00810 [Tetrapisispora blattae CBS 6284]
gi|387511483|emb|CCH58924.1| hypothetical protein TBLA_0B00810 [Tetrapisispora blattae CBS 6284]
Length = 389
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 5/63 (7%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF---GQPKGYAYVEFLQSEAVQE 103
SR +FVGN+ Y T E ++ HFQ CG + V IRT F G+ KG+++++FL E+ +
Sbjct: 221 SRILFVGNLSYDTTDELLRSHFQHCGEI--VKIRTATFEDTGKCKGFSFIDFLTEESATK 278
Query: 104 ALH 106
AL
Sbjct: 279 ALK 281
>gi|340520767|gb|EGR51003.1| predicted protein [Trichoderma reesei QM6a]
Length = 307
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEAL 105
SR VFVGN+ Y + E++ F S G V R + D + G+PKG+ + ++ +++ A+
Sbjct: 7 SRVVFVGNIPYGLSEEQITDIFSSAGKVERFRLVYDSETGRPKGFGFADYPDTDSASSAV 66
Query: 106 -HLNESELHGRQLKV 119
+LNE E+ GR+L+V
Sbjct: 67 RNLNEYEIMGRKLRV 81
>gi|326921961|ref|XP_003207222.1| PREDICTED: deleted in azoospermia-like [Meleagris gallopavo]
Length = 291
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLN 108
+VFVG +D E++ +F+ GTV V I TD+ G KGY +V FL + VQ+ + +
Sbjct: 39 TVFVGGIDIRMNEAEIRSYFEQYGTVKEVKIITDRTGVSKGYGFVSFLDNVDVQKIVE-S 97
Query: 109 ESELHGRQLKV---TVKRTNVPGMKQHRPRRPNP 139
+ +HG++LK+ K+ N+ Q RP NP
Sbjct: 98 QISVHGKRLKLGPAIRKQQNLCSYVQPRPLAFNP 131
>gi|406867619|gb|EKD20657.1| RNA recognition motif containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 339
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL 105
S+SVFVGN+ Y T E++ + F + G V + D+ G+PKG+ +VEF S++ A+
Sbjct: 6 SKSVFVGNIPYGLTEEQIIRIFSTAGKVLNFRLVYDRETGRPKGFGFVEFPDSDSAASAV 65
Query: 106 -HLNESELHGRQLKV 119
+LN+ E+ R+L+V
Sbjct: 66 RNLNDHEIMNRKLRV 80
>gi|426247439|ref|XP_004017493.1| PREDICTED: LOW QUALITY PROTEIN: squamous cell carcinoma antigen
recognized by T-cells 3 [Ovis aries]
Length = 966
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 7/126 (5%)
Query: 45 VDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFL-QSEAVQE 103
++ +FV + +SCT EE+++ ++ GTV + + T++ G+PKG AYVE+ +SEA Q
Sbjct: 801 LEKHKLFVSGLPFSCTKEELEEICKAHGTVKDIRLVTNRAGKPKGLAYVEYENESEASQA 860
Query: 104 ALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKI 163
L ++ + +KV + +N P K P +P S A++P +Y G G+
Sbjct: 861 VLKMDGMTIRENVIKVAI--SNPPQRKV--PEKPEARRA--SGSALLPRQVYGARGKGRT 914
Query: 164 PRFRMP 169
+P
Sbjct: 915 QLSLLP 920
Score = 42.7 bits (99), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 46 DSRSVFVGNVDYSCT--PEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQE 103
D +VFV N+ Y ++ F++CG V V G +GY YVEF + A +
Sbjct: 705 DGVTVFVSNLPYGLGEPAATLRPLFEACGDVVEVRPIFSNRGDFRGYCYVEFREEAAALQ 764
Query: 104 ALHLNESELHGRQLKVT--VKRTNVPGMKQHR 133
AL L+ + GR + V+ V ++ P K R
Sbjct: 765 ALQLDRQSVEGRPMFVSPCVDKSKNPDFKVFR 796
>gi|367010890|ref|XP_003679946.1| hypothetical protein TDEL_0B06060 [Torulaspora delbrueckii]
gi|359747604|emb|CCE90735.1| hypothetical protein TDEL_0B06060 [Torulaspora delbrueckii]
Length = 345
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEAL- 105
+ S+F+GN+ Y CTPE+++ HF G V R I T + G +G VEF S+ V EA+
Sbjct: 45 ANSIFIGNLTYDCTPEDLKDHFSEVGEVVRADIITSR-GHHRGMGTVEFTNSDDVDEAIR 103
Query: 106 HLNESELHGRQLKVTVKRTNVP 127
+ S RQ V V++ N P
Sbjct: 104 RYDSSYFMDRQ--VFVRQDNPP 123
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 50 VFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH-LN 108
VFV N+ YS + ++ F+ G V R + D+ G +G+ F SE +Q A+ N
Sbjct: 155 VFVANLPYSINWQALKDMFKEVGNVIRADVELDRNGYSRGFGTAIFGTSEEMQAAIERYN 214
Query: 109 ESELHGRQLKVTVKRTNVPG 128
EL GR L V R N PG
Sbjct: 215 GYELEGRVLDVREGR-NAPG 233
Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query: 50 VFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH-LN 108
++ N+ S ++ F++ G VN ++ D GQP G A VE+ E + LN
Sbjct: 269 IYCTNLPLSTATSDLYDLFETIGKVNNAELKYDADGQPLGIAVVEYANIEDADVCMERLN 328
Query: 109 ESELHGRQLKVT 120
G L ++
Sbjct: 329 NYNYGGCDLDIS 340
>gi|170574206|ref|XP_001892710.1| cleavage stimulation factor [Brugia malayi]
gi|158601568|gb|EDP38456.1| cleavage stimulation factor, putative [Brugia malayi]
Length = 334
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL 105
+RSVFVGN+ Y E+++Q F G V + + D+ G+PKGY + E+ S+ + A+
Sbjct: 25 ARSVFVGNISYEVGEEQLKQVFSQVGAVVHLRLVHDRDTGKPKGYGFCEYNDSQTAESAI 84
Query: 106 -HLNESELHGRQLKV 119
+LN EL+GR L+V
Sbjct: 85 RNLNGFELNGRPLRV 99
>gi|401405687|ref|XP_003882293.1| hypothetical protein NCLIV_020480 [Neospora caninum Liverpool]
gi|325116708|emb|CBZ52261.1| hypothetical protein NCLIV_020480 [Neospora caninum Liverpool]
Length = 260
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEAL-H 106
R++FV + Y T +++++ F G++ RV + D+ G+P+GY ++EF ++EA +
Sbjct: 98 RTLFVAGISYDTTEKKLKREFDQYGSIKRVRLIYDRNGKPRGYGFIEFENDRDMKEAYKN 157
Query: 107 LNESELHGRQLKVTVKRT-NVPGMKQHR 133
+ ++ GR++ V V+R VPG R
Sbjct: 158 ADGKKIDGRRVLVDVERARTVPGWLPRR 185
>gi|329669018|gb|AEB96397.1| cleavage stimulation factor subunit 2 [Angiostrongylus cantonensis]
Length = 97
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH- 106
SV+VGN+ Y T + + HF G V V I D+ G+PKG+ + EF Q A++
Sbjct: 19 SVYVGNIPYQTTEDAIGNHFSQAGRVTNVRIVYDRETGRPKGFGFCEFSDEAGAQNAVNT 78
Query: 107 LNESELHGRQLKVTVKRTN 125
LN ++ +GR L+V N
Sbjct: 79 LNGTDFNGRSLRVNWANKN 97
>gi|344342838|ref|ZP_08773708.1| RNP-1 like RNA-binding protein [Marichromatium purpuratum 984]
gi|343805390|gb|EGV23286.1| RNP-1 like RNA-binding protein [Marichromatium purpuratum 984]
Length = 90
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEF-LQSEAVQEALH 106
+++VGN+ Y T EE+Q F + G ++ V + TDKF G+ KG+ +VE SEA
Sbjct: 2 NIYVGNLAYGVTQEELQAVFAAYGEISSVNLITDKFTGESKGFGFVEMPNNSEADTAIKA 61
Query: 107 LNESELHGRQLKVT 120
LN++ L GR +KV
Sbjct: 62 LNDTPLKGRNMKVN 75
>gi|390331853|ref|XP_785806.3| PREDICTED: uncharacterized RNA-binding protein C365.04c-like
[Strongylocentrotus purpuratus]
Length = 206
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 50 VFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLN 108
+FVG + YS T E+V +HF + G + V + T K G+ +G+ Y+EF +++ L ++
Sbjct: 72 LFVGQIPYSATTEDVTKHFSTAGELKSVRLATHKDTGKSRGFGYIEFKNNKSYMRGLAMH 131
Query: 109 ESELHGRQLKVTV 121
S LHGR + V +
Sbjct: 132 LSMLHGRPINVEI 144
>gi|284108895|ref|ZP_06386469.1| RNP-1 like RNA-binding protein [Candidatus Poribacteria sp. WGA-A3]
gi|283829840|gb|EFC34132.1| RNP-1 like RNA-binding protein [Candidatus Poribacteria sp. WGA-A3]
Length = 90
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEAL 105
++ ++VGN+ YS T +E+Q F GTV + TD++ G+ +G+ +VE E +A+
Sbjct: 2 NQKIYVGNLSYSTTDQELQDLFAQHGTVQSANVVTDRYTGRSRGFGFVEMGSGEEAGQAI 61
Query: 106 H-LNESELHGRQLKVTVKRTNVPGMKQHRPR 135
LN ++ GR L V R P K RPR
Sbjct: 62 EALNGTDFQGRSLVVNEAR---PKEKSFRPR 89
>gi|443315198|ref|ZP_21044702.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
6406]
gi|442785209|gb|ELR95045.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
6406]
Length = 103
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 53/78 (67%), Gaps = 4/78 (5%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL-- 105
S++VGN+ Y T E+++Q F+ G V+RV++ TD+ G+P+G+A+V+ +Q+EA ++
Sbjct: 2 SIYVGNLSYDVTREDLEQVFKEYGEVSRVSLPTDRETGRPRGFAFVD-MQAEAEEDKAIE 60
Query: 106 HLNESELHGRQLKVTVKR 123
L+ +E GR ++V R
Sbjct: 61 ALDGAEWMGRDMRVNKAR 78
>gi|425777998|gb|EKV16145.1| Translation initiation factor 4B [Penicillium digitatum Pd1]
Length = 481
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQ-PKGYAYVEFLQSEAVQEALHL 107
+ VGN+ + T ++ + F CG N V + DK + PKG+ YVEF E +Q+AL L
Sbjct: 84 TCHVGNLSFESTDADISEFFAGCGVTN-VRLVEDKLTKAPKGFGYVEFETVEGLQKALDL 142
Query: 108 NESELHGRQLKVTV 121
+ S GR ++ +V
Sbjct: 143 SGSSFQGRSIRTSV 156
>gi|324564529|gb|ADY49874.1| Cleavage stimulation factor subunit 2 tau variant, partial [Ascaris
suum]
Length = 82
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL 105
SRS+FVGN+ YS E++ F G+V V I D+ G+P+G+ + EF +A + A+
Sbjct: 2 SRSIFVGNLPYSAREEDIADFFGQVGSVVNVRIVFDRETGRPRGFGFCEFETEDAAERAV 61
Query: 106 -HLNESELHGRQLKV 119
+N ++ GRQ++V
Sbjct: 62 GSMNNADFMGRQIRV 76
>gi|198435747|ref|XP_002131795.1| PREDICTED: similar to ribonucleoprotein antigen [Ciona
intestinalis]
Length = 461
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 60/108 (55%), Gaps = 12/108 (11%)
Query: 31 DPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKG 89
DP AGG + +++FV ++Y T ++++ F++ G + +VTI D G+P+G
Sbjct: 95 DPNAGGDAF--------KTLFVSRINYDTTESKLRREFETYGKIRKVTIVKDVATGKPRG 146
Query: 90 YAYVEFLQSEAVQEALH-LNESELHGRQLKVTVKRTNVPGMKQHRPRR 136
YA+VEF + + A + ++ GR++ V V+R +K RPRR
Sbjct: 147 YAFVEFDRERDMHTAYKSADGKKIDGRRVLVDVERGRT--VKGWRPRR 192
>gi|119490270|ref|ZP_01622783.1| RNA binding protein [Lyngbya sp. PCC 8106]
gi|119454156|gb|EAW35309.1| RNA binding protein [Lyngbya sp. PCC 8106]
Length = 105
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL-- 105
SV++GN+ Y + E+++ F GTV RV I TD+ G+P+G+A+VE + S++ +EA
Sbjct: 2 SVYIGNLSYDVSEEDLKSVFAEYGTVRRVQIPTDRETGRPRGFAFVE-MDSDSEEEAAIE 60
Query: 106 HLNESELHGRQLKVT 120
L+ +E GR LKV
Sbjct: 61 ALDGAEWMGRDLKVN 75
>gi|452825397|gb|EME32394.1| RNA-binding protein [Galdieria sulphuraria]
Length = 152
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 6/93 (6%)
Query: 41 NREEV-DSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQS 98
N ++V D VFVGN+ + C+ EEV F SCG V V + D+ + KG+A+V
Sbjct: 2 NTDDVPDDDCVFVGNLPFDCSEEEVYDVFSSCGNVKEVRMPFDREANRLKGFAFVSMESP 61
Query: 99 EAVQEALHLNE-SELHGRQLKV---TVKRTNVP 127
A ++A +NE +++ GR+L++ T KR++ P
Sbjct: 62 MAARKACDMNEQADIRGRKLRINLSTSKRSSPP 94
>gi|320168617|gb|EFW45516.1| hypothetical protein CAOG_03500 [Capsaspora owczarzaki ATCC 30864]
Length = 385
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 46 DSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEA 104
DS+ VFVGN+ Y T +EV G V + D+ G+PKG+ + E+ +E Q A
Sbjct: 3 DSKCVFVGNISYDVTEQEVIDLCSQVGPVISFRLVFDRDTGKPKGFGFCEYTDAETAQSA 62
Query: 105 L-HLNESELHGRQLKVTVKRTNV 126
+ +LN+ EL GR+++V ++
Sbjct: 63 IRNLNDLELKGRRIRVDFAESDA 85
>gi|327357349|gb|EGE86206.1| RNA binding protein Rnp24 [Ajellomyces dermatitidis ATCC 18188]
Length = 419
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
Query: 8 MEEEATALRQMHAKVGNEMASK----QDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEE 63
M E+ + R+ K N + +D AAG + + S+ VFVGN+ + T E
Sbjct: 149 MSEQLISGRRALVKNANNFVGRPDKPKDEAAGNKTSNSTVHAPSKRVFVGNLGFDVTKEI 208
Query: 64 VQQHFQSCGTVNRVTIRT-DKFGQPKGYAYVEFLQSEAVQEAL 105
+++HF+ CG + + + T G+ KGYA+VEF +A + A+
Sbjct: 209 LEEHFKPCGVIESIQVATFQDTGKCKGYAWVEFESIDAAEAAM 251
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 48/88 (54%), Gaps = 11/88 (12%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGT-----VNRV----TIRTDKFGQPKGYAYVEFLQ 97
S V++GN+ ++ ++V+ F S G+ + R+ I+ + Q KG+AYV+F
Sbjct: 80 SYGVWIGNLPFNAKKDDVRVFFTSSGSLKNEEITRIHLPEGIKQNGKPQNKGFAYVDFTT 139
Query: 98 SEAVQEALHLNESELHGRQLKVTVKRTN 125
+A++ A+ ++E + GR + VK N
Sbjct: 140 QKAMEAAIAMSEQLISGR--RALVKNAN 165
>gi|261188487|ref|XP_002620658.1| RNA binding protein Rnp24 [Ajellomyces dermatitidis SLH14081]
gi|239593142|gb|EEQ75723.1| RNA binding protein Rnp24 [Ajellomyces dermatitidis SLH14081]
Length = 419
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
Query: 8 MEEEATALRQMHAKVGNEMASK----QDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEE 63
M E+ + R+ K N + +D AAG + + S+ VFVGN+ + T E
Sbjct: 149 MSEQLISGRRALVKNANNFVGRPDKPKDEAAGNKTSNSTVHAPSKRVFVGNLGFDVTKEI 208
Query: 64 VQQHFQSCGTVNRVTIRT-DKFGQPKGYAYVEFLQSEAVQEAL 105
+++HF+ CG + + + T G+ KGYA+VEF +A + A+
Sbjct: 209 LEEHFKPCGVIESIQVATFQDTGKCKGYAWVEFESIDAAEAAM 251
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 11/85 (12%)
Query: 50 VFVGNVDYSCTPEEVQQHFQSCGT-----VNRV----TIRTDKFGQPKGYAYVEFLQSEA 100
V++GN+ ++ ++V+ F S G+ + R+ I+ + Q KG+AYV+F +A
Sbjct: 83 VWIGNLPFNVKKDDVRVFFTSSGSLKNEEITRIHLPEGIKQNGKPQNKGFAYVDFTTQKA 142
Query: 101 VQEALHLNESELHGRQLKVTVKRTN 125
++ A+ ++E + GR + VK N
Sbjct: 143 MEAAIAMSEQLISGR--RALVKNAN 165
>gi|145492248|ref|XP_001432122.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399231|emb|CAK64725.1| unnamed protein product [Paramecium tetraurelia]
Length = 559
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 44/76 (57%)
Query: 46 DSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEAL 105
+S + F+GN+ + T + + F+ CG + V I D G+ +G+ YVEF +E+ Q+ L
Sbjct: 403 ESTTCFIGNMSFYATEDSLYPVFEDCGKIKEVRIAKDAEGKSRGFGYVEFFDNESAQKGL 462
Query: 106 HLNESELHGRQLKVTV 121
+++ GR ++V +
Sbjct: 463 AKTGTDVEGRAIRVDL 478
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 50 VFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNE 109
VFV + + T +++++ F CG +N V + G KG A+V F + A+ +
Sbjct: 313 VFVRGLSFDATEQDIKEFFDECGNINSVNLLKGPNGNSKGIAFVRFSTEDGQSAAVEYSG 372
Query: 110 SELHGRQLKVTVKRT 124
E GR +TV++T
Sbjct: 373 QEHMGRT--ITVEKT 385
>gi|239613287|gb|EEQ90274.1| RNA binding protein Rnp24 [Ajellomyces dermatitidis ER-3]
Length = 419
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
Query: 8 MEEEATALRQMHAKVGNEMASK----QDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEE 63
M E+ + R+ K N + +D AAG + + S+ VFVGN+ + T E
Sbjct: 149 MSEQLISGRRALVKNANNFVGRPDKPKDEAAGNKTSNSTVHAPSKRVFVGNLGFDVTKEI 208
Query: 64 VQQHFQSCGTVNRVTIRT-DKFGQPKGYAYVEFLQSEAVQEAL 105
+++HF+ CG + + + T G+ KGYA+VEF +A + A+
Sbjct: 209 LEEHFKPCGVIESIQVATFQDTGKCKGYAWVEFESIDAAEAAM 251
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 46/82 (56%), Gaps = 9/82 (10%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGT-----VNRV----TIRTDKFGQPKGYAYVEFLQ 97
S V++GN+ ++ ++V+ F S G+ + R+ I+ + Q KG+AYV+F
Sbjct: 80 SYGVWIGNLPFNVKKDDVRVFFTSSGSLKNEEITRIHLPEGIKQNGKPQNKGFAYVDFTT 139
Query: 98 SEAVQEALHLNESELHGRQLKV 119
+A++ A+ ++E + GR+ V
Sbjct: 140 QKAMEAAIAMSEQLISGRRALV 161
>gi|292491403|ref|YP_003526842.1| RNP-1 like RNA-binding protein [Nitrosococcus halophilus Nc4]
gi|291579998|gb|ADE14455.1| RNP-1 like RNA-binding protein [Nitrosococcus halophilus Nc4]
Length = 91
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHL 107
S++VGN+ + C+ +E+++ F+ G VN V + +D+ G+P+G+ +VE A + L
Sbjct: 3 SIYVGNLPFQCSQDEIRELFEPFGAVNSVKLISDRETGKPRGFGFVEMDHDAAAEAIEQL 62
Query: 108 NESELHGRQLKVTVKR 123
N ++ GR L++ R
Sbjct: 63 NGTDFKGRPLRINEAR 78
>gi|405953553|gb|EKC21194.1| Squamous cell carcinoma antigen recognized by T-cells 3
[Crassostrea gigas]
Length = 970
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHL 107
R+ FV N+DYS + + Q F CG + + + G+ KGYAYVEF V EAL L
Sbjct: 772 RTSFVSNLDYSIDEDRIGQIFAKCGEMTDIRLVKTIKGKSKGYAYVEFKDELGVLEALKL 831
Query: 108 NESELHGRQLKVT 120
+ + + GR + V+
Sbjct: 832 DRTPIEGRPMFVS 844
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%)
Query: 45 VDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEA 104
++ +F+ N+ ++C+ + + Q F G V V + T + G PKG AYVEF + +A
Sbjct: 862 MEKNKLFIKNLPFTCSKDALIQIFSEHGPVKEVRMVTYRSGAPKGLAYVEFEDEQDAAKA 921
Query: 105 L 105
+
Sbjct: 922 V 922
>gi|425790737|ref|YP_007018654.1| RNA-binding protein [Helicobacter pylori Aklavik86]
gi|425629052|gb|AFX89592.1| RNA-binding protein [Helicobacter pylori Aklavik86]
Length = 82
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL- 105
R+++VGN+ YS T EEV++ F G V V + D+ +PKG+ +VE +Q E V EA+
Sbjct: 2 RNIYVGNLVYSATSEEVKELFSQFGKVFNVKLIYDRETKKPKGFGFVE-MQEEGVNEAIA 60
Query: 106 HLNESELHGRQLKVT 120
LN ++ GR ++VT
Sbjct: 61 KLNNTDFMGRIIRVT 75
>gi|224060641|ref|XP_002193452.1| PREDICTED: nucleolin [Taeniopygia guttata]
Length = 692
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 7 EMEEEATALRQMHAKVGNEMASKQ--DPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEV 64
E + EA A + + K G E+ + G S ++ +S ++ V N+ Y+ T E +
Sbjct: 412 EFKTEAEADKALEEKQGTEIEGRAVVIDFTGEKSQQENQKGESTTLIVNNLSYAATEETL 471
Query: 65 QQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH-LNESELHGRQLKV 119
Q+ F+ ++ + + G+PKGYA+V+F +E +EAL+ LN +E+ GR +++
Sbjct: 472 QEVFKKASSIR---VPQNNQGRPKGYAFVDFATAEDAKEALNSLNNTEIEGRTIRL 524
>gi|288942469|ref|YP_003444709.1| RNP-1 like RNA-binding protein [Allochromatium vinosum DSM 180]
gi|288897841|gb|ADC63677.1| RNP-1 like RNA-binding protein [Allochromatium vinosum DSM 180]
Length = 94
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 12/93 (12%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEF-LQSEAVQEALH 106
+++VGN+ YS T +++++ F + G V + TDKF G KG+A+VE SEA
Sbjct: 2 NIYVGNLAYSVTQDDLREAFGAYGNVESANLITDKFTGDSKGFAFVEMPSNSEADAAIKG 61
Query: 107 LNESELHGRQLKVTVKRTNVPGMKQHRPRRPNP 139
LNE+ L GR L+V Q +PR P
Sbjct: 62 LNETPLKGRPLRVN----------QAKPRSDRP 84
>gi|357157795|ref|XP_003577917.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like
[Brachypodium distachyon]
Length = 244
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 3/111 (2%)
Query: 34 AGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAY 92
A + L EE+ +R ++VGN+ + T +E++ F GTV R + DK+ G+ + + +
Sbjct: 55 ASSAVLEAPEELATRKLYVGNIPRTVTNDELRAMFADHGTVLRADVMYDKYSGRSRRFGF 114
Query: 93 VEFLQSEAVQEALH-LNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMV 142
V E A+ LNE+E+ GR++KV V + +P + P P P V
Sbjct: 115 VTMSSVEEANAAIESLNETEVGGRKIKVNVTESFLPNIDPSAP-EPEPAFV 164
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 45 VDSR-SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTI-RTDKFGQPKGYAYVEFLQSEAVQ 102
VDS+ V+VGN+ + T E ++ F G V T+ R + KGY +V F E V+
Sbjct: 164 VDSQYKVYVGNLAKTVTTEVLKNFFSEKGEVLSATVSRIPGTPKSKGYGFVTFSSEEEVE 223
Query: 103 EALH-LNESELHGRQLKV 119
A+ N +EL G+ ++V
Sbjct: 224 AAVSTFNNTELEGQPIRV 241
>gi|390594976|gb|EIN04384.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 611
Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 62/111 (55%), Gaps = 6/111 (5%)
Query: 27 ASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FG 85
ASK+ A GS+ +E +S+++FVG + ++ +++ F CG V + D+ G
Sbjct: 322 ASKKTKLADGSAAPAEQEEESKTIFVGRLSWNVDDDQLASEFAECGEVVSARVNIDRNTG 381
Query: 86 QPKGYAYVEFLQSEAVQEALH-LNESELHGRQLKVTVKRTNVPGMKQHRPR 135
+ +G+ +VEF + +VQ+A+ +N E+ GR + V PG+ +++ R
Sbjct: 382 KSRGFGHVEFADASSVQKAIDTMNGKEIDGRPVNV----DRAPGLNKNQQR 428
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL 105
S +FVGN+ + T + V + F G V V + TD+ G+PKG+ YVEF+ +A + A
Sbjct: 443 SSVLFVGNLSWDATEDAVWEAFGEHGEVKSVRLPTDRESGRPKGFGYVEFVDVDAAKAAF 502
Query: 106 H-LNESELHGRQLKV 119
L+ +E+ GR +++
Sbjct: 503 EALSGTEIGGRSIRL 517
>gi|268563939|ref|XP_002647049.1| C. briggsae CBR-CPF-2 protein [Caenorhabditis briggsae]
Length = 335
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 44 EVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQ 102
E RSVFVGN+ Y T E ++Q F G V + + D+ G+PKGY ++EF
Sbjct: 8 ERSQRSVFVGNISYDVTEETIRQIFTKAGHVLSIKMVHDRETGKPKGYGFIEFPDIATAD 67
Query: 103 EALH-LNESELHGRQLKV 119
A+ LN EL GR L+V
Sbjct: 68 TAIRVLNGYELGGRVLRV 85
>gi|348667221|gb|EGZ07047.1| hypothetical protein PHYSODRAFT_251824 [Phytophthora sojae]
Length = 419
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 39 LANREEVDS---RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVE 94
++N+ S RSVFVGN+ Y T + +++ F G+V + TD+ G+PKGY + E
Sbjct: 1 MSNKSRASSAKERSVFVGNIPYDVTEDMLKEIFSEAGSVVNFRLVTDRETGKPKGYGFCE 60
Query: 95 FLQSEAVQEAL-HLNESELHGRQLKV 119
+ A+ +LN E++GR L+V
Sbjct: 61 YADGATALSAMRNLNGYEINGRNLRV 86
>gi|195069101|ref|XP_001996948.1| GH22238 [Drosophila grimshawi]
gi|193891982|gb|EDV90848.1| GH22238 [Drosophila grimshawi]
Length = 370
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 46 DSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEAL 105
+ R++FVGN+ YS E++++ F SCG ++ + D KG AYV F Q +AV AL
Sbjct: 272 NKRTIFVGNLKYSANEEKLREIFSSCGEIDYIRCLHDGERGCKGVAYVCFQQPDAVGLAL 331
Query: 106 HLNESELHGRQLKV 119
LNE+ L R + V
Sbjct: 332 ELNETMLDERPIHV 345
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 21/115 (18%)
Query: 16 RQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVN 75
R+ + K +E+ ++DPAA ++ ++F+GN+ + ++ + Q GTVN
Sbjct: 144 RKTNDKDEDEVKRERDPAA-----------EAATIFIGNLPINTKRVQLVRLLQPFGTVN 192
Query: 76 RVTIRTD------KFGQPKGY----AYVEFLQSEAVQEALHLNESELHGRQLKVT 120
+ +RT K Q K AYV ++ ++AL LN +E L+VT
Sbjct: 193 SIRLRTAGGKHLFKHKQRKEAGSLNAYVVLNSAQVAEKALALNGTEFKENHLRVT 247
>gi|169861389|ref|XP_001837329.1| single-stranded DNA binding protein [Coprinopsis cinerea
okayama7#130]
gi|116502051|gb|EAU84946.1| single-stranded DNA binding protein [Coprinopsis cinerea
okayama7#130]
Length = 569
Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 9/123 (7%)
Query: 20 AKVGNEMASKQDPAA--------GGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSC 71
AK G A+ D + G ++ A + S++VFVG + ++ + + F SC
Sbjct: 291 AKSGKRKAADDDEPSTKKVKLENGSAAPAGGDAQQSKAVFVGQLSWNVDNDWLASEFASC 350
Query: 72 GTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNVPGMK 130
G + T++ D+ G+ +G+ YV F EA Q+AL LN E+ R +KV + P
Sbjct: 351 GEIESATVQMDRNTGKSRGFGYVHFTTVEAAQKALELNGKEIDNRPIKVDISTPRNPDAA 410
Query: 131 QHR 133
+ +
Sbjct: 411 RQK 413
Score = 41.6 bits (96), Expect = 0.14, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL 105
S ++FVGN+ ++ + + V F G V V + TD+ G+PKG+ YVEF E ++A
Sbjct: 426 SNTLFVGNLSFNTSEDSVWSLFNDYG-VKSVRLPTDRESGRPKGFGYVEFEDVEGAKKAF 484
Query: 106 HLNE-SELHGRQLKV 119
N ++L GR +++
Sbjct: 485 EANNGADLDGRPIRL 499
>gi|121719870|ref|XP_001276633.1| RNA binding domain protein [Aspergillus clavatus NRRL 1]
gi|119404845|gb|EAW15207.1| RNA binding domain protein [Aspergillus clavatus NRRL 1]
Length = 306
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEAL--- 105
++++GN+ Y T E++++H + G V R + D G +G+AYV+F EA + A+
Sbjct: 124 TIYIGNLFYDVTSEDLRKHMEKYGAVERTNVILDSRGMSRGFAYVQFESVEAARRAIDGT 183
Query: 106 HLNESELHGRQLKVTVKRTNVPGMKQHRP 134
HL L GR++ +TN+ G + +P
Sbjct: 184 HLQ--TLEGRRVTSQYAQTNMDGHRSLQP 210
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL 105
SR++++GN+ + T ++ F+ V V + D+ GQP+G+A+ EF+ +E+ Q+ L
Sbjct: 212 SRTLYIGNLSFEMTDRDLNDLFKDVSNVIDVRVSIDRRTGQPRGFAHAEFIDAESAQKGL 271
Query: 106 H-LNESELHGRQLKVTVKRTN 125
L+ +GRQL++ TN
Sbjct: 272 EILSRKSPYGRQLRLDYSHTN 292
>gi|301100496|ref|XP_002899338.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262104255|gb|EEY62307.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 414
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL- 105
RSVFVGN+ Y T + +++ F G+V + TD+ G+PKGY + E+ A+
Sbjct: 13 RSVFVGNIPYDVTEDMLKEIFSEAGSVMNFRLVTDRETGKPKGYGFCEYADGATALSAMR 72
Query: 106 HLNESELHGRQLKV 119
+LN E++GR L+V
Sbjct: 73 NLNGYEINGRNLRV 86
>gi|242280537|ref|YP_002992666.1| RNP-1 like RNA-binding protein [Desulfovibrio salexigens DSM 2638]
gi|242123431|gb|ACS81127.1| RNP-1 like RNA-binding protein [Desulfovibrio salexigens DSM 2638]
Length = 87
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 53/94 (56%), Gaps = 11/94 (11%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL 105
S++++VGN+ +S T +EV+ F++ G V V + D+ G+P+G+ +VE + A++
Sbjct: 2 SKNIYVGNLPWSATEDEVRAAFEAFGEVVSVKLIEDRETGRPRGFGFVEMEDAGAMEAID 61
Query: 106 HLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNP 139
+L+ + GR LKV + +PR P P
Sbjct: 62 NLDGKDFGGRNLKVN----------EAKPRAPRP 85
>gi|406954527|gb|EKD83359.1| RNP-1 like protein RNA-binding protein, partial [uncultured
bacterium]
Length = 95
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH- 106
+++VGN+ YS T E+++ F G V +I D+ G+ KG+ +VE A +EA+
Sbjct: 2 NIYVGNLPYSATEEQLKTMFGVYGEVTTASIIKDRDTGRSKGFGFVEMTNDAAAEEAIQA 61
Query: 107 LNESELHGRQLKVTVKR 123
LNE++++GR +KV R
Sbjct: 62 LNETDMNGRNIKVNQAR 78
>gi|70983602|ref|XP_747328.1| nucleic acid-binding protein [Aspergillus fumigatus Af293]
gi|66844954|gb|EAL85290.1| nucleic acid-binding protein [Aspergillus fumigatus Af293]
gi|159123666|gb|EDP48785.1| nucleic acid-binding protein [Aspergillus fumigatus A1163]
Length = 324
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 53/98 (54%), Gaps = 10/98 (10%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQ---EAL 105
+V+VGN+ Y T E+++ H Q G V RV + TD G +G+AYV F EA + EA+
Sbjct: 145 TVYVGNLFYDVTAEDLKNHMQQFGVVERVDLITDNRGLSRGFAYVHFDSIEAAKSCVEAM 204
Query: 106 HLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVY 143
HL E GR ++T + + G RP RP +Y
Sbjct: 205 HLQIFE--GR--RITAQYASSGGT---RPLRPASRTLY 235
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 3 IRLKEMEEEATALRQMHAKV--GNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
+ +E + + MH ++ G + ++ + G L SR++++GN+ + T
Sbjct: 189 VHFDSIEAAKSCVEAMHLQIFEGRRITAQYASSGGTRPL----RPASRTLYLGNLSFEMT 244
Query: 61 PEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESEL-HGRQLK 118
++ + F+ V V + D+ GQP+G+A+ EFL E+ Q+A + + +GR+++
Sbjct: 245 DRDLNELFRDINNVIDVRVSVDRRTGQPRGFAHAEFLDVESAQKAFEILSGKAPYGRRIR 304
Query: 119 VTVKRTNVPG 128
V TN G
Sbjct: 305 VDYSSTNRRG 314
>gi|410620336|ref|ZP_11331214.1| RNA-binding protein [Glaciecola polaris LMG 21857]
gi|410160118|dbj|GAC35352.1| RNA-binding protein [Glaciecola polaris LMG 21857]
Length = 151
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 43 EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAV 101
++ +S++++VGN+ Y + VQQHF+ G V+ V + D + G+ KGY +VE + A
Sbjct: 65 DDENSKTLYVGNLPYRANEQAVQQHFELQGQVHSVRLMKDRRTGKRKGYGFVEMTNAGAE 124
Query: 102 QEALHLNESELHGRQLKVTVKRTNV 126
+ +LN+SE R LKV + + V
Sbjct: 125 KAIQNLNDSEFQERTLKVRMAKDKV 149
>gi|350425556|ref|XP_003494159.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Bombus impatiens]
Length = 914
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 44 EVDSR-SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQ 102
EVD + SVF+ N+DYS + EEV+ + G + V + G+ KGY YV+ EAV
Sbjct: 670 EVDDKISVFISNLDYSASEEEVRNALKPAGPITMVKMIRSYNGRSKGYCYVQLTSKEAVD 729
Query: 103 EALHLNESELHGRQLKVT 120
+AL L+ + GR + V+
Sbjct: 730 KALELDRVPIRGRPMFVS 747
Score = 38.5 bits (88), Expect = 0.99, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 45 VDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEA 104
++ +FV + S T E++++ F+ G++ V I T + G KG AYVEF+ + +A
Sbjct: 766 LEKNKLFVKGLPVSTTKEDLEEIFKVHGSLKEVRIVTYRNGHSKGLAYVEFVDENSAGKA 825
Query: 105 L 105
L
Sbjct: 826 L 826
>gi|410611582|ref|ZP_11322680.1| RNA-binding protein [Glaciecola psychrophila 170]
gi|410169000|dbj|GAC36569.1| RNA-binding protein [Glaciecola psychrophila 170]
Length = 152
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Query: 17 QMHAKVGNEMASKQDPAAGG----SSLANREEVDSR--SVFVGNVDYSCTPEEVQQHFQS 70
Q+ A +G + PA S+L+N ++V S +++VGN+ Y E VQ+HF+
Sbjct: 33 QLSAAIGVLVGGLLAPALSKLFSHSTLSNEQDVSSEVSTLYVGNLPYRADEEAVQEHFEQ 92
Query: 71 CGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRTNV 126
G+V V + D + G+ KGY +VE A + +LN+S R LKV + + +
Sbjct: 93 QGSVVSVRLMKDRRTGKRKGYGFVEMNAKGAAKAIKNLNDSTFQERTLKVRLAKEKI 149
>gi|336370674|gb|EGN99014.1| hypothetical protein SERLA73DRAFT_181797 [Serpula lacrymans var.
lacrymans S7.3]
gi|336383445|gb|EGO24594.1| hypothetical protein SERLADRAFT_468158 [Serpula lacrymans var.
lacrymans S7.9]
Length = 484
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLN 108
+ F+GN+ + T E++ +F T++ V I D+ +PKG+ Y+EF + E +++AL +
Sbjct: 82 TAFIGNLAFDMTESELESYFAPQQTIS-VKIIKDREDKPKGFGYIEFTELEGLKDALAKS 140
Query: 109 ESELHGRQLKVTV 121
S L GR ++V+V
Sbjct: 141 GSNLSGRTIRVSV 153
>gi|113475531|ref|YP_721592.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
gi|110166579|gb|ABG51119.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
Length = 89
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH- 106
SV+VGN+ Y T E+++ F G V RV + D+ G+P+G+A+VE + A+
Sbjct: 2 SVYVGNLSYDATDEDLKTAFAKYGNVKRVQVPNDRETGRPRGFAFVEMESEDEETAAIEG 61
Query: 107 LNESELHGRQLKVTVKR 123
L+ SEL GR LKV R
Sbjct: 62 LDGSELMGRILKVNKAR 78
>gi|410977029|ref|XP_003994915.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 2 [Felis catus]
Length = 928
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 67/126 (53%), Gaps = 7/126 (5%)
Query: 45 VDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEF-LQSEAVQE 103
++ +FV + +SCT EE+++ ++ GTV + + T++ G+PKG AYVE+ +S+A Q
Sbjct: 763 LEKHKLFVSGLPFSCTKEELEEICKAHGTVKDIRLVTNRAGKPKGLAYVEYESESQASQA 822
Query: 104 ALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKI 163
L ++ + +KV + +N P K P +P GA++P +Y G G+
Sbjct: 823 VLKMDGMTVKENVIKVAI--SNPPQRKV--PEKPEARRA--PGGALVPRQIYGARGKGRT 876
Query: 164 PRFRMP 169
+P
Sbjct: 877 QLSLLP 882
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 46 DSRSVFVGNVDYSCTPEEVQQH--FQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQE 103
DS +VFV N+ YS + +VQ F++CG V + G +GY YVEF + ++ +
Sbjct: 667 DSITVFVSNLPYSMSEPDVQLRPLFEACGEVAEIRPIFSNRGDFRGYCYVEFKEEKSALQ 726
Query: 104 ALHLNESELHGRQLKVT--VKRTNVPGMKQHR 133
AL L+ + GR + V+ V ++ P K R
Sbjct: 727 ALELDRKNVEGRPMFVSPCVDKSKNPDFKVFR 758
>gi|88813641|ref|ZP_01128871.1| RNA-binding protein [Nitrococcus mobilis Nb-231]
gi|88789097|gb|EAR20234.1| RNA-binding protein [Nitrococcus mobilis Nb-231]
Length = 96
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH 106
+S++VGN+ ++ + +E++ F G VN V + TD+ G+P+G+ +V ++A
Sbjct: 3 KSIYVGNLPFTASEDEIRDLFAQYGEVNEVRLITDRDTGRPRGFGFVRMAPADADAAIEA 62
Query: 107 LNESELHGRQLKVTVKRTNVPGMKQHRPRRP 137
LN +EL GR L++ + ++ RPR+P
Sbjct: 63 LNGTELDGRALRINEAQER----QERRPRQP 89
>gi|225442420|ref|XP_002277538.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Vitis vinifera]
Length = 630
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEAL- 105
+ +++V N+D S +++Q+HF SCG + + G KG+ +V F SE Q+AL
Sbjct: 308 ASNLYVKNLDASVDDDKLQEHFSSCGQITSAKVMRHDSGLSKGFGFVCFSTSEEAQKALT 367
Query: 106 HLNESELHGRQLKVTV 121
LN + LHGR L + +
Sbjct: 368 TLNGTLLHGRSLYIAM 383
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 43 EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQ 102
EE +V+V N+ T + ++ F G V V I D G+ +G+ +V F + +
Sbjct: 202 EETKFTNVYVKNLGEDLTEDIIRDKFSEFGKVGTVVIMKDGNGKSRGFGFVNFESPDEAK 261
Query: 103 EALH-LNESELHGRQLKV 119
+A+ LN + L ++L V
Sbjct: 262 KAVEALNGAMLGSKKLFV 279
>gi|212545797|ref|XP_002153052.1| nucleic acid-binding protein [Talaromyces marneffei ATCC 18224]
gi|210064572|gb|EEA18667.1| nucleic acid-binding protein [Talaromyces marneffei ATCC 18224]
Length = 308
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL 105
+RS+++GN+ Y T E+ + F+S V V + D+ G P+G+A+ +FL + + Q AL
Sbjct: 200 TRSLYIGNLAYDLTDRELNELFKSVRNVIEVRVAVDRQTGNPRGFAHADFLDTPSAQAAL 259
Query: 106 HLNESEL-HGRQLKV 119
+ S+ HGR+LKV
Sbjct: 260 EILSSKAPHGRRLKV 274
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 8/117 (6%)
Query: 11 EATALRQMHAKVGNEMASKQDPAAGGSSLANR------EEVD-SRSVFVGNVDYSCTPEE 63
+AT+ Q+ A+ + A + D G + R VD S ++++GN+ + T E+
Sbjct: 66 DATSAEQVSAEAQDSAAEEVDAPTGQDFRSPRRVNGRVNNVDPSPTIYIGNLFFDITAED 125
Query: 64 VQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEAL-HLNESELHGRQLKV 119
++ +S G V + I +D G KG+ YV F EA Q A+ +N+ GR++ V
Sbjct: 126 LKSKMESFGVVEKAAIISDARGLSKGFGYVTFDSVEAAQRAIEEMNQQVYEGRRVLV 182
>gi|109947722|ref|YP_664950.1| RNA-binding protein [Helicobacter acinonychis str. Sheeba]
gi|109714943|emb|CAJ99951.1| RNA-binding protein [Helicobacter acinonychis str. Sheeba]
Length = 82
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL- 105
R+++VGN+ YS T EEV++ F G V V + D+ +PKG+ +VE +Q E + EA+
Sbjct: 2 RNIYVGNLVYSATSEEVKELFSQFGKVFNVKLIYDRETKKPKGFGFVE-MQEEGINEAIA 60
Query: 106 HLNESELHGRQLKVT 120
LN ++ GR ++VT
Sbjct: 61 KLNNTDFMGRIIRVT 75
>gi|258575439|ref|XP_002541901.1| predicted protein [Uncinocarpus reesii 1704]
gi|237902167|gb|EEP76568.1| predicted protein [Uncinocarpus reesii 1704]
Length = 503
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Query: 24 NEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD- 82
N +K A S ++ +S ++F+GN+ + +Q+ F S GT++ + + TD
Sbjct: 346 NAGGAKDRSQARAKSFGDQTSPESDTLFIGNISFGADENAIQETFSSYGTISGIRLPTDP 405
Query: 83 KFGQPKGYAYVEFLQSEAVQEALH-LNESELHGRQLKV 119
+ G+PKG+ Y++F + + AL+ L SEL GR +++
Sbjct: 406 ESGRPKGFGYIQFSSVDEARSALNELQGSELAGRAMRL 443
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 63/140 (45%), Gaps = 16/140 (11%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL 105
S ++FVGN+ ++ E ++ F+S G ++ V I TD+ G+ +G+ YVEF +E +A
Sbjct: 264 SANLFVGNLSWNVDEEWLRSEFESFGELSGVRIVTDRDSGRSRGFGYVEFTNAEDAAKAF 323
Query: 106 HLNE-SELHGRQLKV--TVKRTNVPGMK------------QHRPRRPNPFMVYQSRGAII 150
+ +EL GR L + R N G K Q P F+ S GA
Sbjct: 324 EAKKGAELDGRPLNLDYANARQNAGGAKDRSQARAKSFGDQTSPESDTLFIGNISFGADE 383
Query: 151 PPFLYSPYGYGKIPRFRMPM 170
+ YG I R+P
Sbjct: 384 NAIQETFSSYGTISGIRLPT 403
>gi|115620271|ref|XP_781643.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Strongylocentrotus purpuratus]
Length = 890
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 42 REEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAV 101
R+ D R+VFV N+ Y+ T + +++ F CGTV V + T+ + KGY YVEF E+
Sbjct: 612 RDNNDPRTVFVKNLGYNVTEKRIRKVFSECGTVRDVRMVTNYQKKFKGYCYVEFEDEESA 671
Query: 102 QEALHLNESELHGRQLKV--TVKRTNVPGMKQ 131
++AL + ++ R + V + R+ P K+
Sbjct: 672 KKALKKDRETINDRPMYVDPSKDRSGAPAEKK 703
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 44 EVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFL-QSEAVQ 102
+++ +FV + + T EE+++ F G + V I T K G PKG AYV+F ++ A +
Sbjct: 709 KMEKNKLFVSGLPRTLTTEELEKTFSKFGKLKGVRIVTFKSGVPKGLAYVDFENEASATR 768
Query: 103 EALHLNESELHGRQLKVTVKRTNVPGMK 130
+ L+ +++ + +TV +N P K
Sbjct: 769 AVMGLDNTQIG--EHTITVAISNPPTRK 794
>gi|427726014|ref|YP_007073291.1| RNP-1 like RNA-binding protein [Leptolyngbya sp. PCC 7376]
gi|427357734|gb|AFY40457.1| RNP-1 like RNA-binding protein [Leptolyngbya sp. PCC 7376]
Length = 100
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH- 106
S+++GN+ Y T ++++ F GTV RV I TD+ +P+G+A+VE + E A+
Sbjct: 2 SIYIGNLSYEVTEDDLRDVFADYGTVKRVQIPTDRETSRPRGFAFVEMSKDEEELAAIEA 61
Query: 107 LNESELHGRQLKVTVKR 123
L+ ++ GRQLKV R
Sbjct: 62 LDGADWMGRQLKVNKAR 78
>gi|366995805|ref|XP_003677666.1| hypothetical protein NCAS_0G04280 [Naumovozyma castellii CBS 4309]
gi|342303535|emb|CCC71315.1| hypothetical protein NCAS_0G04280 [Naumovozyma castellii CBS 4309]
Length = 435
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 17/100 (17%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLN 108
S+FVGN+ Y CTPE+++ +F G V R I T K G +G VEF S V+EA+
Sbjct: 106 SIFVGNLTYDCTPEDLRDYFSGIGEVVRADIITSK-GHHRGMGTVEFTNSRDVEEAIRQY 164
Query: 109 ESEL----------------HGRQLKVTVKRTNVPGMKQH 132
+S +GR + +RT P +Q
Sbjct: 165 DSSYFMDRQIFVRQDNPPPDNGRNERTPSRRTTAPSSRQQ 204
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 50 VFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALH-LN 108
+FV N+ YS + ++ F+ CG V R + D+ G+ +G+ V F + ++ A+ N
Sbjct: 223 IFVANLPYSINWQALKDMFKECGDVMRADVELDRAGRSRGFGTVIFRTRDDMERAIDRYN 282
Query: 109 ESELHGRQLKV 119
E+ GR L V
Sbjct: 283 RFEVDGRTLDV 293
>gi|302817804|ref|XP_002990577.1| hypothetical protein SELMODRAFT_448081 [Selaginella moellendorffii]
gi|300141745|gb|EFJ08454.1| hypothetical protein SELMODRAFT_448081 [Selaginella moellendorffii]
Length = 602
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 65/126 (51%), Gaps = 19/126 (15%)
Query: 27 ASKQDPAAGGSSLAN---------------REEVDSRSVFVGNVDYSCTPEEVQQHFQSC 71
A+KQ PA+ L N +E +S+++FV N+ +S T E++ Q+F+
Sbjct: 309 AAKQAPASKKQKLENGKAAATKTDEVKTPAKEAGESKTLFVRNIPFSVTDEDLAQYFEDA 368
Query: 72 GTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTV---KRTNVPG 128
G V V I G PKG+A+VEF A Q+AL+ + ++ GR++ + + T G
Sbjct: 369 GEVVGVRIAQGDNG-PKGFAHVEFSTEAAAQKALNKSGQDMGGRRIYCDLANPRGTPASG 427
Query: 129 MKQHRP 134
K+ RP
Sbjct: 428 PKRDRP 433
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 62 EEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
E + +HF+SCGT+ RV I TD+ G KG+AY+EF A +A L+ S+L G L V
Sbjct: 464 ESLTKHFKSCGTIERVKIPTDRETGNIKGFAYIEFSTDGAPAKAKELHGSDLDGCNLVV 522
>gi|410078654|ref|XP_003956908.1| hypothetical protein KAFR_0D01270 [Kazachstania africana CBS 2517]
gi|372463493|emb|CCF57773.1| hypothetical protein KAFR_0D01270 [Kazachstania africana CBS 2517]
Length = 443
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEALH 106
RS+FVGN+D+ E + HF CG + V IR K KG+AYV+F +V +AL
Sbjct: 269 RSIFVGNLDFEEDEESLWNHFSKCGEIEYVRIIRDSKTNLGKGFAYVQFSDLSSVNKALL 328
Query: 107 LN 108
LN
Sbjct: 329 LN 330
>gi|156373168|ref|XP_001629405.1| predicted protein [Nematostella vectensis]
gi|156216405|gb|EDO37342.1| predicted protein [Nematostella vectensis]
Length = 817
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 45 VDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQ-SEAVQE 103
+D ++FV N+ + E+++ F G V +V + T++ G+PKGY YVE+ Q S A
Sbjct: 691 LDKHTLFVSNLPFDAKESEIEELFSKHGVVKQVRLVTNRAGKPKGYGYVEYEQESSASTA 750
Query: 104 ALHLNESELHGRQLKVTV 121
L L+++E+ GR + V +
Sbjct: 751 VLTLDKTEVKGRTISVAL 768
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 31 DPAAGGSSLANREEV-DSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKG 89
+PAA + EE D R VF+ N+ +S T + ++ F G V V I + G+ KG
Sbjct: 583 EPAAKKPCGESEEESSDPRKVFISNLLFSITEDHLRDKFSKLGEVLDVRIVKNMAGRSKG 642
Query: 90 YAYVEFLQSEAVQEALHLNESELHGR 115
YAYVEF VQ AL ++ ++ GR
Sbjct: 643 YAYVEFNNESTVQAALAMDREKMEGR 668
>gi|406608094|emb|CCH40528.1| Nucleolar protein 12 [Wickerhamomyces ciferrii]
Length = 458
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 14/120 (11%)
Query: 6 KEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQ 65
K +E L +H +V D + S + N+ R++FVGN+D+ EE+
Sbjct: 248 KSLEANGKVLFDLHLRV--------DSVSHPSKIDNK-----RTIFVGNLDFEEKEEELW 294
Query: 66 QHFQSCGTVNRVTI-RTDKFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQLKVTVKRT 124
F CG + V I R KG+ YV+F +V +AL +NE +L ++ K+ + R+
Sbjct: 295 NIFSECGEIESVRIVRDSTTNMGKGFGYVQFKDFTSVSKALLMNEKKLGEKKRKLRISRS 354
>gi|410977027|ref|XP_003994914.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 1 [Felis catus]
Length = 964
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 67/126 (53%), Gaps = 7/126 (5%)
Query: 45 VDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEF-LQSEAVQE 103
++ +FV + +SCT EE+++ ++ GTV + + T++ G+PKG AYVE+ +S+A Q
Sbjct: 799 LEKHKLFVSGLPFSCTKEELEEICKAHGTVKDIRLVTNRAGKPKGLAYVEYESESQASQA 858
Query: 104 ALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKI 163
L ++ + +KV + +N P K P +P GA++P +Y G G+
Sbjct: 859 VLKMDGMTVKENVIKVAI--SNPPQRKV--PEKPEARRA--PGGALVPRQIYGARGKGRT 912
Query: 164 PRFRMP 169
+P
Sbjct: 913 QLSLLP 918
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 46 DSRSVFVGNVDYSCTPEEVQQH--FQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQE 103
DS +VFV N+ YS + +VQ F++CG V + G +GY YVEF + ++ +
Sbjct: 703 DSITVFVSNLPYSMSEPDVQLRPLFEACGEVAEIRPIFSNRGDFRGYCYVEFKEEKSALQ 762
Query: 104 ALHLNESELHGRQLKVT--VKRTNVPGMKQHR 133
AL L+ + GR + V+ V ++ P K R
Sbjct: 763 ALELDRKNVEGRPMFVSPCVDKSKNPDFKVFR 794
>gi|260841409|ref|XP_002613908.1| hypothetical protein BRAFLDRAFT_160958 [Branchiostoma floridae]
gi|229299298|gb|EEN69917.1| hypothetical protein BRAFLDRAFT_160958 [Branchiostoma floridae]
Length = 152
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 46 DSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEAL 105
D+R++F+ N+ Y T E + + F V R+ I D G+PKG+ YV+F EA +EA+
Sbjct: 1 DARTLFLRNLSYDSTKESIMEVFTDAVDV-RIPIFKDS-GRPKGFGYVDFESEEAAKEAM 58
Query: 106 H-LNESELHGRQLKV 119
+N+SEL GR + V
Sbjct: 59 DSMNQSELDGRTINV 73
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEA 104
S+++ N+ Y +++QQ F+ C + +T R + G+ KG+ Y++F +A +EA
Sbjct: 97 SKTLIAKNLSYDTGEDDLQQAFEGCISARVITDR--ETGRSKGFGYIDFDSEDAAKEA 152
>gi|297743165|emb|CBI36032.3| unnamed protein product [Vitis vinifera]
Length = 476
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEAL- 105
+ +++V N+D S +++Q+HF SCG + + G KG+ +V F SE Q+AL
Sbjct: 308 ASNLYVKNLDASVDDDKLQEHFSSCGQITSAKVMRHDSGLSKGFGFVCFSTSEEAQKALT 367
Query: 106 HLNESELHGRQLKVTV 121
LN + LHGR L + +
Sbjct: 368 TLNGTLLHGRSLYIAM 383
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 43 EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQ 102
EE +V+V N+ T + ++ F G V V I D G+ +G+ +V F + +
Sbjct: 202 EETKFTNVYVKNLGEDLTEDIIRDKFSEFGKVGTVVIMKDGNGKSRGFGFVNFESPDEAK 261
Query: 103 EALH-LNESELHGRQLKV 119
+A+ LN + L ++L V
Sbjct: 262 KAVEALNGAMLGSKKLFV 279
>gi|348528531|ref|XP_003451770.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Oreochromis niloticus]
Length = 948
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 60/111 (54%), Gaps = 10/111 (9%)
Query: 45 VDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFL-QSEAVQE 103
++ +F+ + +SCT E++ + ++ GTV V + T + G+PKG AYVEF +++A Q
Sbjct: 781 MEKHKIFISGLPFSCTKEQLAEICKNHGTVKEVRLVTYRSGKPKGLAYVEFADETQASQA 840
Query: 104 ALHLNESELHGRQLKVTVKR------TNVPGMKQHRPR-RPNPFMVYQSRG 147
L L+ E+ G ++ V + T+ PG RP P VY +RG
Sbjct: 841 VLKLDGIEVEGNKISVAISNPPRRNATDKPG--SSRPTGDAMPRQVYGARG 889
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 6/90 (6%)
Query: 46 DSRSVFVGNVDYSCT-PE-EVQQHFQSCGTVNRVT-IRTDKFGQPKGYAYVEFLQSEAVQ 102
D+ SVFV N+ Y+ PE +++ F++CG + ++ I T K G +GY YV+F +V
Sbjct: 685 DNSSVFVSNLAYTLEEPEAKLRTLFETCGPIKQIRPIFTGK-GSFRGYGYVQFESPVSVP 743
Query: 103 EALHLNESELHGRQLKVT--VKRTNVPGMK 130
EAL L+ ++ GR + V+ V + P K
Sbjct: 744 EALKLDRRDVEGRPVFVSPCVDKNKNPDFK 773
>gi|340384626|ref|XP_003390812.1| PREDICTED: nucleolar protein 12-like, partial [Amphimedon
queenslandica]
Length = 224
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEALHL 107
SVFVGNV + E++++ F+SCG ++ + I D + G KG+AYV+F S +V A
Sbjct: 87 SVFVGNVPFGADEEKLRKVFESCGPIDGIRIIKDTRTGINKGFAYVKFKDSSSVLFACKK 146
Query: 108 NES-ELHGRQLKV 119
NE E+ GR+L+V
Sbjct: 147 NERIEVEGRKLRV 159
>gi|392569148|gb|EIW62322.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 556
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 43 EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAV 101
EE ++S+FVG + ++ + + Q F CG V ++ D+ G+ +G+ YVEF +EAV
Sbjct: 292 EEEGTKSIFVGRLSWNVDNDWLAQEFAECGEVISARVQMDRNTGKSRGFGYVEFATTEAV 351
Query: 102 QEALHLNESELHGRQLKV 119
+ AL LN E+ GR + +
Sbjct: 352 EAALLLNGKEIDGRPVNI 369
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL 105
S +FVGN+ + CT ++V + F G V V + TD+ G+PKG+ YVEF E ++A
Sbjct: 396 SAVLFVGNLSWDCTEDQVWEVFGEHGDVKSVRLPTDRETGRPKGFGYVEFTDIETAKKAF 455
Query: 106 H-LNESELHGRQLKV 119
L+ +E+ GR +++
Sbjct: 456 EGLSGTEVAGRPIRL 470
>gi|452981005|gb|EME80765.1| hypothetical protein MYCFIDRAFT_139429 [Pseudocercospora fijiensis
CIRAD86]
Length = 301
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 39 LANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQ 97
+A RE+ R VF+GN+ Y + E++ F G V + DK GQPKG+ ++E+
Sbjct: 1 MAQREK-GGRVVFIGNIPYGVSEEQIMDIFGRAGQVVNFRLVYDKETGQPKGFGFLEYTD 59
Query: 98 SEAVQEAL-HLNESELHGRQLKVTVKRTN 125
++A A+ +LN+ +L GR L+V N
Sbjct: 60 TDAAASAVRNLNDFDLKGRTLRVDYSNDN 88
>gi|238489901|ref|XP_002376188.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
gi|220698576|gb|EED54916.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
Length = 92
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 9/65 (13%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
MK R+ EME EA LR+M A + + + ++ ++EE+D+RS+FVGNVDY +
Sbjct: 29 MKRRVAEMESEAAKLREMQATLDQQSENLRE---------DKEEIDARSIFVGNVDYGAS 79
Query: 61 PEEVQ 65
PEE+Q
Sbjct: 80 PEEIQ 84
>gi|297821731|ref|XP_002878748.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297324587|gb|EFH55007.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 534
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 65/121 (53%), Gaps = 5/121 (4%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCT 60
+K +++E+E +Q+ + E+ K P +G S ++ +SR + V NV+Y+
Sbjct: 398 VKEKMQELELRIIQSKQLKKQKIEEL--KPSPQSGESQY-QQDVTESRIIHVTNVNYAAK 454
Query: 61 PEEVQQHFQS-CGTVNRVTIRTDKFGQ-PKGYAYVEFLQSEAVQEALHLNESELHGRQLK 118
E + F S CG V VTI TD + PKG A+V F E+V +A+ L+ + + R +K
Sbjct: 455 KEAISMFFSSKCGAVENVTIVTDPVTRHPKGSAFVTFATKESVNQAIALSGTMFYSRPIK 514
Query: 119 V 119
V
Sbjct: 515 V 515
>gi|386346963|ref|YP_006045212.1| RNP-1 like RNA-binding protein [Spirochaeta thermophila DSM 6578]
gi|339411930|gb|AEJ61495.1| RNP-1 like RNA-binding protein [Spirochaeta thermophila DSM 6578]
Length = 100
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 50 VFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH-L 107
++VGN++Y T + ++Q F+ G V V I TD+ G KG+ +VE EA + A+ L
Sbjct: 5 IYVGNLNYQTTEDTLRQLFEQYGEVESVKIITDRDSGFSKGFGFVEMASEEAGEAAISAL 64
Query: 108 NESELHGRQLKVTVKRTNVPGMKQHRPRRPN 138
N+ EL GRQL+V K H RR +
Sbjct: 65 NQHELEGRQLRVN---------KAHERRRSS 86
>gi|317152646|ref|YP_004120694.1| RNP-1 like RNA-binding protein [Desulfovibrio aespoeensis Aspo-2]
gi|316942897|gb|ADU61948.1| RNP-1 like RNA-binding protein [Desulfovibrio aespoeensis Aspo-2]
Length = 87
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 9/92 (9%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEAVQEAL 105
+++++VGN+ ++CT EE++ F++ G V V + D + +P+G+ +VE A++
Sbjct: 2 AKNLYVGNLPWNCTEEELRAAFEAYGEVRSVKLVNDHETDRPRGFGFVEMGDQGALEAVE 61
Query: 106 HLNESELHGRQLKVTVKRTNVPGMKQHRPRRP 137
+LN S L GR +KV R RP RP
Sbjct: 62 NLNGSSLGGRSIKVNEARP--------RPERP 85
>gi|74096251|ref|NP_001027768.1| glycine rich RNA binding protein [Ciona intestinalis]
gi|5911800|emb|CAB56042.1| glycine rich RNA binding protein [Ciona intestinalis]
Length = 162
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 50 VFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL-HL 107
VFVGN+ Y+ T +++++HF G V V I D+ G+ +G+A+V F +A+ +L
Sbjct: 6 VFVGNLSYNATEDDLRKHFSGSGQVEEVAIICDRETGRSRGFAFVTFSSEGEANDAIENL 65
Query: 108 NESELHGRQLKV 119
NES++ GR + V
Sbjct: 66 NESDVRGRNVSV 77
>gi|428309319|ref|YP_007120296.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
gi|428250931|gb|AFZ16890.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
Length = 101
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 13/95 (13%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEALH- 106
S++VGN+ Y T E++++ F GTVN VT+ D+ G+ +G+A+VE E A+
Sbjct: 2 SIYVGNLSYDVTEEDIREVFAEYGTVNNVTLPKDRETGRKRGFAFVEMGTDEEETAAIEA 61
Query: 107 LNESELHGRQLKVTVKRTNVPGMKQHRPRRPN-PF 140
L+ +E GR LKV + +PR N PF
Sbjct: 62 LDGAEWMGRNLKVN----------KAKPREDNKPF 86
>gi|310793511|gb|EFQ28972.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 416
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 37 SSLANREEV-DSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRT-DKFGQPKGYAYVE 94
+++A +EEV S +F+GN+ + T ++V QHF+ CG ++ V + T + G+ KGY +V+
Sbjct: 190 AAVAAKEEVPKSSKIFIGNLSFKTTDDDVWQHFEKCGQIDWVKVATFEDTGKCKGYGWVK 249
Query: 95 FLQSEAVQEAL 105
F + E+ A+
Sbjct: 250 FREPESAGWAV 260
>gi|154344829|ref|XP_001568356.1| putative RNA binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065693|emb|CAM43465.1| putative RNA binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 458
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCG--TVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEAL 105
S+F+GNV Y T E+V FQ G V RV +R + G KG+ YVEF+ + +V A+
Sbjct: 274 SIFLGNVAYDTTEEDVWNFFQEHGIRDVKRVRLVRDRETGDCKGFGYVEFMHASSVHPAI 333
Query: 106 HLNESELHGRQLKV 119
+L+GR+L++
Sbjct: 334 ETRGDKLNGRELRI 347
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 24/108 (22%)
Query: 38 SLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRT------DKFGQPKG-- 89
+L EE D+R++FVGN+ + +V++ F+SCG++ V IR D+ Q G
Sbjct: 154 ALHANEEEDARTIFVGNLPNTIHKRDVEKIFKSCGSITAVRIRCQALEELDEKHQNMGRA 213
Query: 90 ----------------YAYVEFLQSEAVQEALHLNESELHGRQLKVTV 121
AYV F +E++ AL N H R + VT
Sbjct: 214 VRVLRGEIKKDAKYSSTAYVLFDSAESIASALEKNGLVFHNRHIVVTT 261
>gi|440635199|gb|ELR05118.1| hypothetical protein GMDG_07160 [Geomyces destructans 20631-21]
Length = 318
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 8/96 (8%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL 105
S+SVFVGN+ Y T E++ F S G V + D+ G+PKG+ + E+ S++ A+
Sbjct: 7 SKSVFVGNIPYGLTEEQIIDIFSSAGKVVNFRLVYDRETGRPKGFGFAEYPDSDSAASAV 66
Query: 106 -HLNESELHGRQLKVTVKR------TNVPGMKQHRP 134
+LN+ E+ R+L+V T+ P QH P
Sbjct: 67 RNLNDYEIMNRKLRVDFSNDGAEDETSAPTGYQHPP 102
>gi|355717861|gb|AES06077.1| squamous cell carcinoma antigen recognized by T cells 3 [Mustela
putorius furo]
Length = 958
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 67/126 (53%), Gaps = 7/126 (5%)
Query: 45 VDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFL-QSEAVQE 103
++ +FV + +SCT EE+++ ++ GTV + + T++ G+PKG AYVE+ +S+A Q
Sbjct: 794 LEKHKLFVSGLPFSCTKEELEEICKAHGTVKDIRLVTNRAGKPKGLAYVEYENESQASQA 853
Query: 104 ALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKI 163
L ++ + +KV + +N P K P +P GA++P +Y G G+
Sbjct: 854 VLKMDGMTIKENVIKVAI--SNPPQRKV--PEKPEARKA--PGGAMVPRQIYGARGKGRT 907
Query: 164 PRFRMP 169
+P
Sbjct: 908 QLSLLP 913
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 46 DSRSVFVGNVDYSCTPEEVQQH--FQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQE 103
DS +VFV N+ YS +V+ F++CG V + G +GY YVEF + ++ +
Sbjct: 698 DSITVFVSNLPYSLGEPDVKLRPLFEACGEVAEIRPIFSNRGDFRGYCYVEFKEEKSALQ 757
Query: 104 ALHLNESELHGRQLKVT--VKRTNVPGMKQHR 133
AL L+ + GR + V+ V ++ P K R
Sbjct: 758 ALQLDRKTVEGRPMFVSPCVDKSKNPDFKVFR 789
>gi|402587151|gb|EJW81087.1| hypothetical protein WUBG_08006 [Wuchereria bancrofti]
Length = 334
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 47 SRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL 105
+RSVFVGN+ Y E+++Q F G V + + D+ G+PKGY + E+ ++ + A+
Sbjct: 25 ARSVFVGNISYEVGEEQLKQVFSQVGAVVHLRLVHDRDTGKPKGYGFCEYNDAQTAESAI 84
Query: 106 -HLNESELHGRQLKV 119
+LN EL+GR L+V
Sbjct: 85 RNLNGFELNGRPLRV 99
>gi|301771702|ref|XP_002921271.1| PREDICTED: LOW QUALITY PROTEIN: squamous cell carcinoma antigen
recognized by T-cells 3-like [Ailuropoda melanoleuca]
Length = 964
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 67/126 (53%), Gaps = 7/126 (5%)
Query: 45 VDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFL-QSEAVQE 103
++ +FV + +SCT EE+++ ++ GTV + + T++ G+PKG AYVE+ +S+A Q
Sbjct: 799 LEKHKLFVSGLPFSCTKEELEEICKAHGTVKDIRLVTNRAGKPKGLAYVEYENESQASQA 858
Query: 104 ALHLNESELHGRQLKVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGKI 163
L ++ + +KV + +N P K P +P GA++P +Y G G+
Sbjct: 859 VLKMDGMTIKENVIKVAI--SNPPQRKV--PEKPEARKA--PGGAMVPRQIYGARGKGRT 912
Query: 164 PRFRMP 169
+P
Sbjct: 913 QLSLLP 918
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 46 DSRSVFVGNVDYSCTPEEVQQH--FQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQE 103
DS +VFV N+ YS +V+ F++CG V + G +GY YVEF + ++ +
Sbjct: 703 DSITVFVSNLPYSLGEPDVKLRPLFEACGEVVEIRPIFSNRGDFRGYCYVEFKEEKSALQ 762
Query: 104 ALHLNESELHGRQLKVT--VKRTNVPGMKQHR 133
AL L+ + GR + V+ V ++ P K R
Sbjct: 763 ALELDRKTVEGRPMFVSPCVDKSKNPDFKVFR 794
>gi|367017858|ref|XP_003683427.1| hypothetical protein TDEL_0H03570 [Torulaspora delbrueckii]
gi|359751091|emb|CCE94216.1| hypothetical protein TDEL_0H03570 [Torulaspora delbrueckii]
Length = 419
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 46 DSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRV-TIRTDKFGQPKGYAYVEFLQSEAVQEA 104
+ RS+FVGN+D+ E + HF+ CG + V +R K KG+AY++F ++V +A
Sbjct: 246 NKRSIFVGNLDFEEDDESLWLHFKDCGEIEYVRLVRDAKTNMGKGFAYIQFKDFQSVNKA 305
Query: 105 LHLNE 109
L LN+
Sbjct: 306 LLLND 310
>gi|429962103|gb|ELA41647.1| hypothetical protein VICG_01280 [Vittaforma corneae ATCC 50505]
Length = 344
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Query: 27 ASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTI-RTDKFG 85
+ +D GS EE R+VF+ ++ Y ++++Q Q G V RVTI T
Sbjct: 74 TTNEDETQSGSEEECDEET-QRTVFIKDIGYDLREDDLRQQMQRLGEVIRVTIPMTHDLR 132
Query: 86 QPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
+ KG+AYVEF + Q+AL L+ +EL GR++ V
Sbjct: 133 RNKGFAYVEFKRLADAQKALKLDGTELLGRKVAV 166
>gi|303310583|ref|XP_003065303.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240104965|gb|EER23158.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 391
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 58/103 (56%), Gaps = 5/103 (4%)
Query: 8 MEEEATALRQMHAKVGNEMASKQDP--AAGGSSLANREEVD--SRSVFVGNVDYSCTPEE 63
+ E+ A R + K N A + D GG+S+ ++ + S+ +FVGN+ + T E
Sbjct: 141 LSEQLLAGRAVLIKDANNFAGRPDKPRDDGGTSMGSKTSANPPSKKIFVGNLAFDITKEM 200
Query: 64 VQQHFQSCGTVNRVTIRT-DKFGQPKGYAYVEFLQSEAVQEAL 105
+++H++ CG ++ V I T + G+ KGY +VEF + E+ A+
Sbjct: 201 LEEHYRPCGGISHVHIATFEDSGKCKGYGWVEFEELESAAAAV 243
>gi|413924474|gb|AFW64406.1| hypothetical protein ZEAMMB73_935050 [Zea mays]
Length = 101
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 39/55 (70%), Gaps = 3/55 (5%)
Query: 1 MKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNV 55
MK +LKEMEEEA ALR M AKV EM DP+ S+ +E+VD+RSV+VGNV
Sbjct: 42 MKRKLKEMEEEAAALRDMQAKVAKEMQGG-DPSI--STAEAKEQVDARSVYVGNV 93
>gi|413921101|gb|AFW61033.1| putative nucleolin-like family protein [Zea mays]
Length = 659
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 46/74 (62%), Gaps = 5/74 (6%)
Query: 46 DSRSVFVGNVDYSCTPEEV----QQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEA 100
+S S+F+ D + + +E+ +QHF CG + RV+I TD + G KG AY++F ++
Sbjct: 492 NSSSIFIRGFDKNLSEDEIRSSLEQHFSDCGEMTRVSIPTDHESGAIKGMAYIDFKDQDS 551
Query: 101 VQEALHLNESELHG 114
V +AL L+ S++ G
Sbjct: 552 VSKALELSGSDIGG 565
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 43 EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQ 102
E + ++F+GNV + ++V++ F+ G V V T G KG+ YVEF+ +EA
Sbjct: 389 ESTEVNTLFMGNVPWKAEFDDVKEFFEDVGEVVDVRFPTHDDGNRKGFCYVEFVSAEAAA 448
Query: 103 EALHLNES-ELHGRQLKV 119
+A +S ELHGR++++
Sbjct: 449 KAYKEKQSKELHGREVRL 466
>gi|320034863|gb|EFW16806.1| RNA binding protein Rnp24 [Coccidioides posadasii str. Silveira]
Length = 391
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 58/103 (56%), Gaps = 5/103 (4%)
Query: 8 MEEEATALRQMHAKVGNEMASKQDP--AAGGSSLANREEVD--SRSVFVGNVDYSCTPEE 63
+ E+ A R + K N A + D GG+S+ ++ + S+ +FVGN+ + T E
Sbjct: 141 LSEQLLAGRAVLIKDANNFAGRPDKPRDDGGTSMGSKTSANPPSKKIFVGNLAFDITKEM 200
Query: 64 VQQHFQSCGTVNRVTIRT-DKFGQPKGYAYVEFLQSEAVQEAL 105
+++H++ CG ++ V I T + G+ KGY +VEF + E+ A+
Sbjct: 201 LEEHYRPCGGISHVHIATFEDSGKCKGYGWVEFEELESAAAAV 243
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 50 VFVGNVDYSCTPEEVQQHFQSCG-----TVNRVTI----RTDKFGQPKGYAYVEFLQSEA 100
+++GN+ +S ++++ + G + R+ + + + KG+AY++F S A
Sbjct: 75 IWIGNLPFSVAQDDLRNFLTTKGPFTPDEITRIHLPQGEKRNGKQLNKGFAYIDFSTSGA 134
Query: 101 VQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPR 135
VQ A+ L+E L GR V +K N + +PR
Sbjct: 135 VQRAIVLSEQLLAGRA--VLIKDANNFAGRPDKPR 167
>gi|119195333|ref|XP_001248270.1| hypothetical protein CIMG_02041 [Coccidioides immitis RS]
gi|392862497|gb|EAS36853.2| RNA binding protein Rnp24 [Coccidioides immitis RS]
Length = 391
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 5/107 (4%)
Query: 4 RLKEMEEEATALRQMHAKVGNEMASKQDP--AAGGSSLANREEVD--SRSVFVGNVDYSC 59
R + E+ A R + K N A + D GG+S+ ++ + S+ +FVGN+ +
Sbjct: 137 RAIALSEQLLAGRAVLIKDANNFAGRPDKPRDDGGTSMGSKTSANPPSKKIFVGNLAFDI 196
Query: 60 TPEEVQQHFQSCGTVNRVTIRT-DKFGQPKGYAYVEFLQSEAVQEAL 105
T E +++H++ CG ++ V I T + G+ KGY +VEF + E+ A+
Sbjct: 197 TKEMLEEHYRPCGGISHVHIATFEDSGKCKGYGWVEFEELESAAAAV 243
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 50 VFVGNVDYSCTPEEVQQHFQSCG-----TVNRVTI----RTDKFGQPKGYAYVEFLQSEA 100
+++GN+ +S ++++ + G + R+ + + + KG+AY++F S A
Sbjct: 75 IWIGNLPFSVAQDDLRNFLTTKGPFTPDEITRIHLPQGEKRNGKQLNKGFAYIDFSTSGA 134
Query: 101 VQEALHLNESELHGRQLKVTVKRTNVPGMKQHRPR 135
VQ A+ L+E L GR V +K N + +PR
Sbjct: 135 VQRAIALSEQLLAGRA--VLIKDANNFAGRPDKPR 167
>gi|358054360|dbj|GAA99286.1| hypothetical protein E5Q_05981 [Mixia osmundae IAM 14324]
Length = 913
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQEALHL 107
R +FVGN+ ++C ++++ F++ G + R ++ G+ +G+ V F E Q A+H+
Sbjct: 392 RHLFVGNLPFNCQWQDLKDLFRAAGNILRADVQLGPDGRSRGFGSVLFAYPEEAQNAMHM 451
Query: 108 -NESELHGRQLKVTVKR 123
N E +GRQLKV R
Sbjct: 452 FNGYEFNGRQLKVHFDR 468
>gi|194042423|ref|XP_001926989.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 1 [Sus scrofa]
Length = 615
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 37 SSLANREEV---DSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAY 92
SSLA R+ RSVFVGN+ Y T E+++ F G+V + D+ G+PKGY +
Sbjct: 2 SSLAVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGF 61
Query: 93 VEFLQSEAVQEAL-HLNESELHGRQLKV 119
E+ E A+ +LN E GR L+V
Sbjct: 62 CEYQDQETALSAMRNLNGREFSGRALRV 89
>gi|413921103|gb|AFW61035.1| putative nucleolin-like family protein [Zea mays]
Length = 654
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 46/74 (62%), Gaps = 5/74 (6%)
Query: 46 DSRSVFVGNVDYSCTPEEV----QQHFQSCGTVNRVTIRTD-KFGQPKGYAYVEFLQSEA 100
+S S+F+ D + + +E+ +QHF CG + RV+I TD + G KG AY++F ++
Sbjct: 487 NSSSIFIRGFDKNLSEDEIRSSLEQHFSDCGEMTRVSIPTDHESGAIKGMAYIDFKDQDS 546
Query: 101 VQEALHLNESELHG 114
V +AL L+ S++ G
Sbjct: 547 VSKALELSGSDIGG 560
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 43 EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLQSEAVQ 102
E + ++F+GNV + ++V++ F+ G V V T G KG+ YVEF+ +EA
Sbjct: 384 ESTEVNTLFMGNVPWKAEFDDVKEFFEDVGEVVDVRFPTHDDGNRKGFCYVEFVSAEAAA 443
Query: 103 EALHLNES-ELHGRQLKVTVKRTNVPGMKQHRPRRPN 138
+A +S ELHGR++++ + G PR N
Sbjct: 444 KAYKEKQSKELHGREVRLDFAK----GRSTQTPRSGN 476
>gi|196016887|ref|XP_002118293.1| hypothetical protein TRIADDRAFT_62320 [Trichoplax adhaerens]
gi|190579124|gb|EDV19227.1| hypothetical protein TRIADDRAFT_62320 [Trichoplax adhaerens]
Length = 930
Score = 55.8 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 47/93 (50%)
Query: 28 SKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQP 87
S+ D + S + SVF+ NV +S ++++ F +CG V V + G+
Sbjct: 661 SRTDGSLNNPSRERERYNEKTSVFISNVPFSAVEDDIRSFFSTCGNVKDVRLVRAPNGKF 720
Query: 88 KGYAYVEFLQSEAVQEALHLNESELHGRQLKVT 120
KGY YVEF QEAL L+ + + GR + V+
Sbjct: 721 KGYGYVEFEDELVTQEALKLDRNTIAGRPVYVS 753
>gi|196005405|ref|XP_002112569.1| hypothetical protein TRIADDRAFT_56724 [Trichoplax adhaerens]
gi|190584610|gb|EDV24679.1| hypothetical protein TRIADDRAFT_56724 [Trichoplax adhaerens]
Length = 316
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL- 105
RSVFVGN+ Y T E+++ F S G V + D+ G+PKGY + EF E A+
Sbjct: 13 RSVFVGNIPYEATEEQLKDIFGSAGPVVSFRLVYDRESGKPKGYGFCEFQDKETALSAMR 72
Query: 106 HLNESELHGRQLKV 119
+L+ EL+GR L+V
Sbjct: 73 NLSGYELNGRSLRV 86
>gi|67483728|ref|XP_657084.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56474323|gb|EAL51698.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|449705266|gb|EMD45349.1| RNA recognition motif domain containing protein [Entamoeba
histolytica KU27]
Length = 136
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 50 VFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQ-PKGYAYVEFLQSEAVQEAL-HL 107
+++G++ YS T E ++ F+ GTV + TD+ Q KG+ +V F + E ++A+ +
Sbjct: 4 LYIGSLAYSVTDESLKAAFEKFGTVTDCKVVTDRDSQRSKGFGFVTFEKDEDAKKAIEEM 63
Query: 108 NESELHGRQLKVTVKR 123
NE EL GR++KV V R
Sbjct: 64 NEQELEGRRIKVDVSR 79
>gi|341889641|gb|EGT45576.1| hypothetical protein CAEBREN_06918 [Caenorhabditis brenneri]
Length = 348
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 37 SSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEF 95
S L N E RSVFVGN+ Y T + ++ F G V + + D+ G+PKGY ++EF
Sbjct: 8 SGLPN--ERSQRSVFVGNISYDVTEDTIRAMFSKAGPVMSIKMVHDRETGKPKGYGFIEF 65
Query: 96 LQSEAVQEALH-LNESELHGRQLKV 119
+ A+ LN EL GR L+V
Sbjct: 66 PDIQTADTAIRVLNGHELGGRILRV 90
>gi|325189600|emb|CCA24085.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 358
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 48 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAYVEFLQSEAVQEAL- 105
RSVFVGN+ Y T E +++ F G V + TD+ G+PKGY + E+ A+
Sbjct: 15 RSVFVGNIPYDVTEEMLREIFSEAGAVMNFRLVTDRDSGKPKGYGFCEYADGATALSAMR 74
Query: 106 HLNESELHGRQLKV 119
+LN E++GR L+V
Sbjct: 75 NLNGYEINGRNLRV 88
>gi|78189511|ref|YP_379849.1| RNA recognition motif-containing protein [Chlorobium
chlorochromatii CaD3]
gi|78171710|gb|ABB28806.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
chlorochromatii CaD3]
Length = 90
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 49 SVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-GQPKGYAYVEFLQSEAVQEAL-H 106
++++GN+ YS T +++ F G V +I TDKF G+ KG+ +V+ +EA+
Sbjct: 2 NIYIGNLAYSVTENDLRDAFGQFGQVESASIITDKFSGRSKGFGFVDMPNDSEAREAIGA 61
Query: 107 LNESELHGRQLKVT 120
+NE EL+GR +KV
Sbjct: 62 MNEKELNGRPIKVN 75
>gi|328769388|gb|EGF79432.1| hypothetical protein BATDEDRAFT_35374 [Batrachochytrium
dendrobatidis JAM81]
Length = 555
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 37 SSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFL 96
+++A ++ VD R+++ GN+ + +EV F SCG V +V + D + YA++EF
Sbjct: 133 ATIAGQDSVD-RTIYTGNIHSGLSQQEVSMLFSSCGDVTQVKMAGDATHSTR-YAFIEFA 190
Query: 97 QSEAVQEALHLNESELHGRQLKVTVKRTNV-------PGMKQHRPRRPNPFMVYQ 144
SE+ AL+L+ + GR +KV + ++ PGM RP+ MV +
Sbjct: 191 TSESAAMALNLHGMMVAGRAIKVNRSKHSIGRPIGMYPGM-----FRPDTDMVMK 240
>gi|269063712|emb|CAS85141.1| squid, variant B [Blattella germanica]
Length = 317
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Query: 18 MHAKVGN-EMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNR 76
M+ + GN E PA GS+ A + D R +FVG + + T +E++ HF + G +
Sbjct: 29 MNGEAGNGETGGGDAPADSGSAEAPGRD-DDRKLFVGGLSWETTDKELRDHFHTYGEIES 87
Query: 77 VTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQL 117
+ ++TD G+ +G+A++ F Q++++ + L + ++ +++
Sbjct: 88 INVKTDPNTGRSRGFAFIVFSQADSIDKVLSAGDHVINNKKV 129
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 34 AGGSSLANREEVDSRS-------VFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-G 85
+ G + N ++VD + +FVG + + ++++ F GT+ V + DK
Sbjct: 118 SAGDHVINNKKVDPKKAKARHGKIFVGGLVPDLSDDDIKSFFAQYGTIVEVEMPFDKTKN 177
Query: 86 QPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
Q KG+ ++ F + VQE L + ++G+++ V
Sbjct: 178 QRKGFCFITFESEQVVQELLKSPKQSINGKEVDV 211
>gi|269063710|emb|CAS85140.1| squid, variant A [Blattella germanica]
Length = 341
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Query: 18 MHAKVGN-EMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNR 76
M+ + GN E PA GS+ A + D R +FVG + + T +E++ HF + G +
Sbjct: 29 MNGEAGNGETGGGDAPADSGSAEAPGRD-DDRKLFVGGLSWETTDKELRDHFHTYGEIES 87
Query: 77 VTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQL 117
+ ++TD G+ +G+A++ F Q++++ + L + ++ +++
Sbjct: 88 INVKTDPNTGRSRGFAFIVFSQADSIDKVLSAGDHVINNKKV 129
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 34 AGGSSLANREEVDSRS-------VFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-G 85
+ G + N ++VD + +FVG + + ++++ F GT+ V + DK
Sbjct: 118 SAGDHVINNKKVDPKKAKARHGKIFVGGLVPDLSDDDIKSFFAQYGTIVEVEMPFDKTKN 177
Query: 86 QPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
Q KG+ ++ F + VQE L + ++G+++ V
Sbjct: 178 QRKGFCFITFESEQVVQELLKSPKQSINGKEVDV 211
>gi|269063720|emb|CAS85145.1| squid, variant F [Blattella germanica]
Length = 297
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Query: 18 MHAKVGN-EMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNR 76
M+ + GN E PA GS+ A + D R +FVG + + T +E++ HF + G +
Sbjct: 29 MNGEAGNGETGGGDAPADSGSAEAPGRD-DDRKLFVGGLSWETTDKELRDHFHTYGEIES 87
Query: 77 VTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQL 117
+ ++TD G+ +G+A++ F Q++++ + L + ++ +++
Sbjct: 88 INVKTDPNTGRSRGFAFIVFSQADSIDKVLSAGDHVINNKKV 129
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 34 AGGSSLANREEVDSRS-------VFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-G 85
+ G + N ++VD + +FVG + + ++++ F GT+ V + DK
Sbjct: 118 SAGDHVINNKKVDPKKAKARHGKIFVGGLVPDLSDDDIKSFFAQYGTIVEVEMPFDKTKN 177
Query: 86 QPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
Q KG+ ++ F + VQE L + ++G+++ V
Sbjct: 178 QRKGFCFITFESEQVVQELLKSPKQSINGKEVDV 211
>gi|269063718|emb|CAS85144.1| squid, variant E [Blattella germanica]
Length = 321
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Query: 18 MHAKVGN-EMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNR 76
M+ + GN E PA GS+ A + D R +FVG + + T +E++ HF + G +
Sbjct: 29 MNGEAGNGETGGGDAPADSGSAEAPGRD-DDRKLFVGGLSWETTDKELRDHFHTYGEIES 87
Query: 77 VTIRTD-KFGQPKGYAYVEFLQSEAVQEALHLNESELHGRQL 117
+ ++TD G+ +G+A++ F Q++++ + L + ++ +++
Sbjct: 88 INVKTDPNTGRSRGFAFIVFSQADSIDKVLSAGDHVINNKKV 129
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 34 AGGSSLANREEVDSRS-------VFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKF-G 85
+ G + N ++VD + +FVG + + ++++ F GT+ V + DK
Sbjct: 118 SAGDHVINNKKVDPKKAKARHGKIFVGGLVPDLSDDDIKSFFAQYGTIVEVEMPFDKTKN 177
Query: 86 QPKGYAYVEFLQSEAVQEALHLNESELHGRQLKV 119
Q KG+ ++ F + VQE L + ++G+++ V
Sbjct: 178 QRKGFCFITFESEQVVQELLKSPKQSINGKEVDV 211
>gi|88682979|gb|AAI05553.1| CSTF2 protein [Bos taurus]
Length = 632
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 37 SSLANREEV---DSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDK-FGQPKGYAY 92
SSLA R+ RSVFVGN+ Y T E+++ F G+V + D+ G+PKGY +
Sbjct: 2 SSLAVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGF 61
Query: 93 VEFLQSEAVQEAL-HLNESELHGRQLKV 119
E+ E A+ +LN E GR L+V
Sbjct: 62 CEYQDQETALSAMRNLNGREFSGRALRV 89
>gi|374725008|gb|EHR77088.1| putative RNA-binding protein [uncultured marine group II
euryarchaeote]
Length = 477
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 8/106 (7%)
Query: 21 KVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIR 80
K+G A D S R++ + ++VGN+ + T ++++ F TVN + +
Sbjct: 333 KIGVRDADSDDKK---SKRGKRKDPEGLKLYVGNLPFKATEDQLKALFDGVATVNELVMA 389
Query: 81 TDKFGQPKGYAYV---EFLQSEAVQEALHLNESELHGRQLKVTVKR 123
TD G+PKG+A+ E Q +A+ E LN +EL GR++KV V +
Sbjct: 390 TDNAGKPKGFAFAFVKETDQGDAIVE--KLNGTELLGRKIKVDVSQ 433
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.133 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,722,551,405
Number of Sequences: 23463169
Number of extensions: 102192074
Number of successful extensions: 279184
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3902
Number of HSP's successfully gapped in prelim test: 10436
Number of HSP's that attempted gapping in prelim test: 265720
Number of HSP's gapped (non-prelim): 19939
length of query: 176
length of database: 8,064,228,071
effective HSP length: 132
effective length of query: 44
effective length of database: 9,262,057,059
effective search space: 407530510596
effective search space used: 407530510596
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 71 (32.0 bits)