BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030489
(176 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C6S6|PPR67_ARATH Putative pentatricopeptide repeat-containing protein At1g31840
OS=Arabidopsis thaliana GN=At1g31840 PE=2 SV=2
Length = 840
Score = 155 bits (391), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/225 (40%), Positives = 115/225 (51%), Gaps = 52/225 (23%)
Query: 2 LIKECH-LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
L+ +CH ++ A K F L + +EPDI+TYNT+ICGYCSL RLDEA ++FE L P
Sbjct: 610 LLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGP 669
Query: 61 NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
N++T TILI CK MD A MFS M EKG K N VTY CL+D + KS +++ +F ++
Sbjct: 670 NTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLF 729
Query: 121 EEMCENNISPNI-----------------------------------------------A 133
EEM E ISP+I
Sbjct: 730 EEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKV 789
Query: 134 GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYN----LQSSGSQEH 174
GR EA LY+ MLRNG+ PD LL L++YN L S G H
Sbjct: 790 GRLVEAALLYEHMLRNGVKPDDLLQRALSEYNPPKWLMSKGVWVH 834
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 12/165 (7%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A ++GQ+ RG+EP I+TY+++I G+C L L+E + + P+ + + +L+D
Sbjct: 410 AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
K+G M A KML + + NVV ++ LIDG+ + A V+ M I P
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529
Query: 131 NIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
++A GR EA+ L+ M + G+ PD L TL D
Sbjct: 530 DVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLID 574
Score = 97.1 bits (240), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 89/169 (52%), Gaps = 12/169 (7%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
++ A +L + D G P+++T+ T+I G+C +D A LF+ + ++P+ I ++
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
LID + K G + +FS+ L KG K +VV +S ID Y KS ++ +A VY+ M
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ 385
Query: 127 NISPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
ISPN+ GR EA +Y +L+ G+ P + S+L D
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLID 434
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 95/193 (49%), Gaps = 44/193 (22%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLF------------- 50
K +D A LF + RG+EPD+I Y+T+I GY L +LF
Sbjct: 298 KRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVV 357
Query: 51 ----------------------EKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
+++ C + PN +T+TILI C++GR+ +A M+ ++
Sbjct: 358 VFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQI 417
Query: 89 LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIAGRPTEAMQLYDSMLR 148
L++G + ++VTYS LIDG+ K N++S F +YE+M + P++ +Y +L
Sbjct: 418 LKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV--------IY-GVLV 468
Query: 149 NGIMPDGLLLSTL 161
+G+ GL+L +
Sbjct: 469 DGLSKQGLMLHAM 481
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 86/163 (52%), Gaps = 16/163 (9%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
++K+ GQ + +++ +N++I G+C LNR DEA+++F + +KP+ TFT ++
Sbjct: 484 SVKMLGQ----SIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR 539
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
EGR+++A +F +M + G + + + Y LID + K +++ M N IS
Sbjct: 540 VSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISA 599
Query: 131 NIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
+IA R +A + +++++ + PD + +T+
Sbjct: 600 DIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTM 642
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 65/127 (51%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
D ALK+F + G++PD+ T+ T++ RL+EA+ LF ++ + L+P+++ +
Sbjct: 511 RFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYC 570
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
LIDAFCK + +F M A++ + +I FK ++ A + + E
Sbjct: 571 TLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEG 630
Query: 127 NISPNIA 133
+ P+I
Sbjct: 631 KMEPDIV 637
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 112 bits (281), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 94/169 (55%), Gaps = 12/169 (7%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
++D AL LF ++ +G P+++TYNT+I GYC L ++D+ +L + L+PN I++
Sbjct: 220 NIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYN 279
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
++I+ C+EGRM + + + ++M +G + VTY+ LI GY K N A ++ EM +
Sbjct: 280 VVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRH 339
Query: 127 NISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
++P++ AG AM+ D M G+ P+ +TL D
Sbjct: 340 GLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVD 388
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 101/179 (56%), Gaps = 12/179 (6%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+++ A ++ ++ D G P ++TYN +I G+C ++++A+ + E + L P+ ++++
Sbjct: 395 YMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYS 454
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
++ FC+ +D+A + +M+EKG K + +TYS LI G+ + + K A D+YEEM
Sbjct: 455 TVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRV 514
Query: 127 NISPN------------IAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 173
+ P+ + G +A+QL++ M+ G++PD + S L + + S ++E
Sbjct: 515 GLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTRE 573
Score = 100 bits (248), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 102/195 (52%), Gaps = 36/195 (18%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
+D AL++ ++ ++G++PD ITY+++I G+C R EA L+E++ V L P+ T+T
Sbjct: 466 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTA 525
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV-----YEE 122
LI+A+C EG ++ A + ++M+EKG +VVTYS LI+G K + A + YEE
Sbjct: 526 LINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEE 585
Query: 123 MCENNISPN----------------------IAGRPTEAMQLYDSMLRNGIMPDGLLLST 160
++++ + + G TEA Q+++SML PDG
Sbjct: 586 SVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDG----- 640
Query: 161 LADYNLQSSGSQEHC 175
YN+ G HC
Sbjct: 641 -TAYNIMIHG---HC 651
Score = 96.3 bits (238), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 95/184 (51%), Gaps = 12/184 (6%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
KE + AL + ++ GL P +ITY ++I C ++ A++ +++ L PN
Sbjct: 322 KEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNER 381
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+T L+D F ++G M++A + +M + G +VVTY+ LI+G+ + M+ A V E+M
Sbjct: 382 TYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM 441
Query: 124 CENNISPNIAGRPT------------EAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGS 171
E +SP++ T EA+++ M+ GI PD + S+L + +
Sbjct: 442 KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRT 501
Query: 172 QEHC 175
+E C
Sbjct: 502 KEAC 505
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 89/172 (51%), Gaps = 12/172 (6%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K +++ A++ Q+ RGL P+ TY T++ G+ ++EA ++ ++ P+ +
Sbjct: 357 KAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVV 416
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+ LI+ C G+M+DA + M EKG +VV+YS ++ G+ +S ++ A V EM
Sbjct: 417 TYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREM 476
Query: 124 CENNISPN-------IAG-----RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
E I P+ I G R EA LY+ MLR G+ PD + L +
Sbjct: 477 VEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALIN 528
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 84/172 (48%), Gaps = 12/172 (6%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L +E + + ++ RG D +TYNT+I GYC +A+ + ++ L P+
Sbjct: 285 LCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPS 344
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
IT+T LI + CK G M+ A +M +G N TY+ L+DG+ + M A+ V
Sbjct: 345 VITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLR 404
Query: 122 EMCENNISPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
EM +N SP++ G+ +A+ + + M G+ PD + ST+
Sbjct: 405 EMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTV 456
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNR-LDEAVQLFEKLTCVQLKPNSITFT 66
+D AL + G P +++YN ++ R + A +F+++ Q+ PN T+
Sbjct: 150 IDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYN 209
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
ILI FC G +D A +F KM KG NVVTY+ LIDGY K + + F + M
Sbjct: 210 ILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALK 269
Query: 127 NISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
+ PN+ GR E + M R G D + +TL
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 74/137 (54%), Gaps = 15/137 (10%)
Query: 5 ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
E L+ AL+L ++ ++G+ PD++TY+ +I G +R EA +L KL + P+ +T
Sbjct: 533 EGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVT 592
Query: 65 FTILID---------------AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFK 109
+ LI+ FC +G M +A +F ML K K + Y+ +I G+ +
Sbjct: 593 YHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCR 652
Query: 110 SQNMKSAFDVYEEMCEN 126
+ +++ A+ +Y+EM ++
Sbjct: 653 AGDIRKAYTLYKEMVKS 669
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 56/121 (46%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A ++F + + +PD YN +I G+C + +A L++++ +++T L+
Sbjct: 624 ADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVK 683
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
A KEG++++ + +L + L++ + NM DV EM ++ P
Sbjct: 684 ALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLP 743
Query: 131 N 131
N
Sbjct: 744 N 744
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 102/181 (56%), Gaps = 18/181 (9%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
+KE L A KL+ ++ R ++PDI TY+++I G+C +RLDEA +FE + PN
Sbjct: 340 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 399
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T+ LI+ FCK R+D+ +F +M ++G N VTY+ LI G+F++++ +A V++
Sbjct: 400 VVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 459
Query: 122 EMCENNISPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSS 169
+M + + PNI G+ +AM +++ + R+ + P T+ YN+
Sbjct: 460 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP------TIYTYNIMIE 513
Query: 170 G 170
G
Sbjct: 514 G 514
Score = 97.1 bits (240), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 95/172 (55%), Gaps = 12/172 (6%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K H D AL LF ++ ++G+ P++ITY+++I C+ R +A +L + ++ PN
Sbjct: 270 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPN 329
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+TF LIDAF KEG++ +A ++ +M+++ ++ TYS LI+G+ + A ++E
Sbjct: 330 VVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 389
Query: 122 EMCENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
M + PN+ A R E ++L+ M + G++ + + +TL
Sbjct: 390 LMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL 441
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 85/165 (51%), Gaps = 12/165 (7%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A+ L ++ RG +P+++TY ++ G C +D A L K+ +++ N + ++ +ID
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVID 268
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
+ CK DDA +F++M KG + NV+TYS LI + A + +M E I+P
Sbjct: 269 SLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINP 328
Query: 131 NIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
N+ G+ EA +LYD M++ I PD S+L +
Sbjct: 329 NVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 373
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 94/185 (50%), Gaps = 16/185 (8%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
+ + AL L G++ G EP I+T ++++ GYC R+ +AV L +++ + +P++I
Sbjct: 132 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 191
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
TFT LI + +A + +M+++G + N+VTY +++G K ++ AF++ +M
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 251
Query: 124 CENNISPNIAGRPT------------EAMQLYDSMLRNGIMPDGL----LLSTLADYNLQ 167
I N+ T +A+ L+ M G+ P+ + L+S L +Y
Sbjct: 252 EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERW 311
Query: 168 SSGSQ 172
S S+
Sbjct: 312 SDASR 316
Score = 87.0 bits (214), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 87/174 (50%), Gaps = 12/174 (6%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K +D A L ++ +E +++ Y+T+I C D+A+ LF ++ ++PN
Sbjct: 235 LCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 294
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
IT++ LI C R DA+ + S M+E+ NVVT++ LID + K + A +Y+
Sbjct: 295 VITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYD 354
Query: 122 EMCENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
EM + +I P+I R EA +++ M+ P+ + +TL +
Sbjct: 355 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIN 408
Score = 79.7 bits (195), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 73/123 (59%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
D A +F Q+ G+ P+I+TYNT++ G C +L++A+ +FE L +++P T+ I+
Sbjct: 452 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 511
Query: 69 IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
I+ CK G+++D +F + KG K +V+ Y+ +I G+ + + A ++ +M E+
Sbjct: 512 IEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGP 571
Query: 129 SPN 131
P+
Sbjct: 572 LPD 574
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 82/163 (50%), Gaps = 12/163 (7%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K +D ++LF +++ RGL + +TY T+I G+ D A +F+++ + PN +
Sbjct: 412 KAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIM 471
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+ L+D CK G+++ A ++F + + + TY+ +I+G K+ ++ +D++ +
Sbjct: 472 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSL 531
Query: 124 CENNISPNI------------AGRPTEAMQLYDSMLRNGIMPD 154
+ P++ G EA L+ M +G +PD
Sbjct: 532 SLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 78/159 (49%), Gaps = 12/159 (7%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
LD A+ LFG + P I +N ++ + + D + L EK+ + + N T+ I
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
LI+ FC+ ++ A + KM++ G + ++VT S L++GY + + A + ++M E
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 128 ISPN------------IAGRPTEAMQLYDSMLRNGIMPD 154
P+ + + +EA+ L D M++ G P+
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 224
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K L+ A+ +F L +EP I TYN +I G C ++++ LF L+ +KP+
Sbjct: 480 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPD 539
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGP 93
I + +I FC++G ++A +F KM E GP
Sbjct: 540 VIIYNTMISGFCRKGLKEEADALFRKMREDGP 571
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 64/126 (50%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
D + L ++ G+ ++ TYN +I +C +++ A+ L K+ + +P+ +T +
Sbjct: 101 FDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSS 160
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
L++ +C R+ DA + +M+E G + + +T++ LI G F A + + M +
Sbjct: 161 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 220
Query: 128 ISPNIA 133
PN+
Sbjct: 221 CQPNLV 226
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 95/172 (55%), Gaps = 12/172 (6%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K + AA K F ++ R + PD++TY II G+C + + EA +LF ++ C L+P+S+
Sbjct: 363 KRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSV 422
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
TFT LI+ +CK G M DA + + M++ G NVVTY+ LIDG K ++ SA ++ EM
Sbjct: 423 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
Query: 124 CENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
+ + PNI +G EA++L G+ D + +TL D
Sbjct: 483 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 92/184 (50%), Gaps = 12/184 (6%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L KE LD+A +L ++ GL+P+I TYN+I+ G C ++EAV+L + L +
Sbjct: 466 LCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 525
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
++T+T L+DA+CK G MD A + +ML KG + +VT++ L++G+ ++ +
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 585
Query: 122 EMCENNISPN------------IAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSS 169
M I+PN I A +Y M G+ PDG L + ++
Sbjct: 586 WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKAR 645
Query: 170 GSQE 173
+E
Sbjct: 646 NMKE 649
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 97/188 (51%), Gaps = 13/188 (6%)
Query: 1 MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
+L + C L A + F ++ +G+ PD + Y T+I G+C + A + F ++ + P
Sbjct: 325 LLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITP 384
Query: 61 NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
+ +T+T +I FC+ G M +A +F +M KG + + VT++ LI+GY K+ +MK AF V+
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 121 EEMCENNISPNIAGRPT------------EAMQLYDSMLRNGIMPDGLLLSTLADYNLQS 168
M + SPN+ T A +L M + G+ P+ +++ + L
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN-GLCK 503
Query: 169 SGSQEHCI 176
SG+ E +
Sbjct: 504 SGNIEEAV 511
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 89/171 (52%), Gaps = 17/171 (9%)
Query: 3 IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
IKE H L L +L +G PD+I+Y+T++ GYC LD+ +L E + LKPNS
Sbjct: 262 IKEAH---HLLLLMEL--KGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNS 316
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
+ +I C+ ++ +A FS+M+ +G + V Y+ LIDG+ K ++++A + E
Sbjct: 317 YIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYE 376
Query: 123 MCENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
M +I+P++ G EA +L+ M G+ PD + + L
Sbjct: 377 MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 12/171 (7%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K H+ A ++ + G P+++TY T+I G C LD A +L ++ + L+PN
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+ +++ CK G +++A + + G A+ VTY+ L+D Y KS M A ++ +EM
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Query: 124 CENNISPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTLA 162
+ P I G + +L + ML GI P+ ++L
Sbjct: 553 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 86/172 (50%), Gaps = 12/172 (6%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K +D A ++ ++ +GL+P I+T+N ++ G+C L++ +L + + PN+
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 597
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
TF L+ +C + AT ++ M +G + TY L+ G+ K++NMK A+ +++EM
Sbjct: 598 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Query: 124 CENNISPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
S +++ + EA +++D M R G+ D + +D
Sbjct: 658 KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSD 709
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 59/120 (49%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+L AA ++ + RG+ PD TY ++ G+C + EA LF+++ + T++
Sbjct: 611 NLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYS 670
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
+LI F K + +A +F +M +G A+ + D +K + + D +E+ EN
Sbjct: 671 VLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIEN 730
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 98/179 (54%), Gaps = 12/179 (6%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K+ LD A LF ++ +G + DIITYNT+I G+C+ R D+ +L + ++ PN
Sbjct: 273 LCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 332
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+TF++LID+F KEG++ +A + +M+++G N +TY+ LIDG+ K ++ A + +
Sbjct: 333 VVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVD 392
Query: 122 EMCENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQS 168
M P+I A R + ++L+ M G++ + + +TL QS
Sbjct: 393 LMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQS 451
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 88/155 (56%), Gaps = 4/155 (2%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
+KE L A +L ++ RG+ P+ ITYN++I G+C NRL+EA+Q+ + + P+
Sbjct: 343 FVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPD 402
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+TF ILI+ +CK R+DD +F +M +G AN VTY+ L+ G+ +S ++ A +++
Sbjct: 403 IMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQ 462
Query: 122 EMCENNISPNIAGRPTEAMQLYDSMLRNGIMPDGL 156
EM + P+I L D + NG + L
Sbjct: 463 EMVSRRVRPDIVSYKI----LLDGLCDNGELEKAL 493
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 83/163 (50%), Gaps = 12/163 (7%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A++L ++ +R ++ D + Y+ II G C LD A LF ++ K + IT+ LI
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
FC GR DD + M+++ NVVT+S LID + K ++ A + +EM + I+P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366
Query: 131 N-------IAG-----RPTEAMQLYDSMLRNGIMPDGLLLSTL 161
N I G R EA+Q+ D M+ G PD + + L
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNIL 409
Score = 90.1 bits (222), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 97/206 (47%), Gaps = 47/206 (22%)
Query: 5 ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
EC + AL+L ++ + G +P +IT NT++ G C ++ +AV L +++ +PN +T
Sbjct: 171 ECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVT 230
Query: 65 -----------------------------------FTILIDAFCKEGRMDDATMMFSKML 89
++I+ID CK+G +D+A +F++M
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 290
Query: 90 EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIA------------GRPT 137
KG KA+++TY+ LI G+ + + +M + ISPN+ G+
Sbjct: 291 IKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLR 350
Query: 138 EAMQLYDSMLRNGIMPDGLLLSTLAD 163
EA QL M++ GI P+ + ++L D
Sbjct: 351 EADQLLKEMMQRGIAPNTITYNSLID 376
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 82/130 (63%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
KE L+ A+++ + +G +PDI+T+N +I GYC NR+D+ ++LF +++ + N++
Sbjct: 380 KENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTV 439
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+ L+ FC+ G+++ A +F +M+ + + ++V+Y L+DG + ++ A +++ ++
Sbjct: 440 TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKI 499
Query: 124 CENNISPNIA 133
++ + +I
Sbjct: 500 EKSKMELDIG 509
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 91/214 (42%), Gaps = 47/214 (21%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
L A G++ G EPD + +NT++ G C R+ EA++L +++ + KP IT
Sbjct: 138 KLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLN 197
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVT--------------------------- 99
L++ C G++ DA ++ +M+E G + N VT
Sbjct: 198 TLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEER 257
Query: 100 --------YSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI------------AGRPTEA 139
YS +IDG K ++ +AF+++ EM +I AGR +
Sbjct: 258 NIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDG 317
Query: 140 MQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 173
+L M++ I P+ + S L D ++ +E
Sbjct: 318 AKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLRE 351
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 70/127 (55%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
L+ AL++FG++ +E DI Y II G C+ +++D+A LF L +K ++ +
Sbjct: 488 ELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYN 547
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
I+I C++ + A ++F KM E+G + +TY+ LI + + +A ++ EEM +
Sbjct: 548 IMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSS 607
Query: 127 NISPNIA 133
+++
Sbjct: 608 GFPADVS 614
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 67/125 (53%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
L+ A KLF ++ R + PDI++Y ++ G C L++A+++F K+ +++ + +
Sbjct: 453 KLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYM 512
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
I+I C ++DDA +F + KG K + Y+ +I + ++ A ++ +M E
Sbjct: 513 IIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEE 572
Query: 127 NISPN 131
+P+
Sbjct: 573 GHAPD 577
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 76/174 (43%), Gaps = 12/174 (6%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
+ K + L L Q+ +G+ I T + +I +C +L A K+ + +P+
Sbjct: 98 IAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPD 157
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
++ F L++ C E R+ +A + +M+E G K ++T + L++G + + A + +
Sbjct: 158 TVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLID 217
Query: 122 EMCENNISPN------------IAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
M E PN +G+ AM+L M I D + S + D
Sbjct: 218 RMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+D A LF L +G++ D YN +I C + L +A LF K+T P+ +T+
Sbjct: 523 KVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYN 582
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
ILI A + A + +M G A+V T +I+ + KS D+
Sbjct: 583 ILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELDKSFLDM 635
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 96/165 (58%), Gaps = 12/165 (7%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
+KE L A KL+ ++ R ++PDI TY+++I G+C +RLDEA +FE + PN
Sbjct: 338 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 397
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T++ LI FCK R+++ +F +M ++G N VTY+ LI G+F++++ +A V++
Sbjct: 398 VVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 457
Query: 122 EMCENNISPNIA------------GRPTEAMQLYDSMLRNGIMPD 154
+M + PNI G+ +AM +++ + R+ + PD
Sbjct: 458 QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 502
Score = 99.8 bits (247), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 89/172 (51%), Gaps = 12/172 (6%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K +D AL L ++ +E D++ YNTII G C +D+A+ LF ++ ++P+
Sbjct: 233 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
T++ LI C GR DA+ + S M+E+ NVVT+S LID + K + A +Y+
Sbjct: 293 VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 352
Query: 122 EMCENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
EM + +I P+I R EA +++ M+ P+ + STL
Sbjct: 353 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTL 404
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 84/163 (51%), Gaps = 12/163 (7%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A+ L Q+ RG +PD++TY T++ G C +D A+ L +K+ +++ + + + +ID
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIID 266
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
CK MDDA +F++M KG + +V TYS LI A + +M E I+P
Sbjct: 267 GLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINP 326
Query: 131 NIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
N+ G+ EA +LYD M++ I PD S+L
Sbjct: 327 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 369
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 47/209 (22%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K H+D AL LF ++ ++G+ PD+ TY+++I C+ R +A +L + ++ PN
Sbjct: 268 LCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPN 327
Query: 62 SITFTILIDAFCKEG-----------------------------------RMDDATMMFS 86
+TF+ LIDAF KEG R+D+A MF
Sbjct: 328 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 387
Query: 87 KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIAGRPT--------- 137
M+ K NVVTYS LI G+ K++ ++ +++ EM + + N T
Sbjct: 388 LMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 447
Query: 138 ---EAMQLYDSMLRNGIMPDGLLLSTLAD 163
A ++ M+ G+ P+ L + L D
Sbjct: 448 DCDNAQMVFKQMVSVGVHPNILTYNILLD 476
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 88/173 (50%), Gaps = 15/173 (8%)
Query: 6 CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
CH + A+ L Q+ + G +PD T+ T+I G N+ EAV L +++ +P+
Sbjct: 164 CHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDL 223
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
+T+ +++ CK G +D A + KM + +A+VV Y+ +IDG K ++M A +++ E
Sbjct: 224 VTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTE 283
Query: 123 MCENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
M I P++ GR ++A +L M+ I P+ + S L D
Sbjct: 284 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 336
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 89/176 (50%), Gaps = 12/176 (6%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K ++ ++LF +++ RGL + +TY T+I G+ D A +F+++ V + PN +
Sbjct: 410 KAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 469
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+ IL+D CK G++ A ++F + + ++ TY+ +I+G K+ ++ ++++ +
Sbjct: 470 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL 529
Query: 124 CENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQ 167
+SPN+ G EA L M +G +P+ +TL L+
Sbjct: 530 SLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLR 585
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 78/142 (54%), Gaps = 4/142 (2%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
D A +F Q+ G+ P+I+TYN ++ G C +L +A+ +FE L ++P+ T+ I+
Sbjct: 450 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 509
Query: 69 IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
I+ CK G+++D +F + KG NV+ Y+ +I G+ + + + A + ++M E+
Sbjct: 510 IEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGP 569
Query: 129 SPNIAGRPTEAMQLYDSMLRNG 150
PN T L + LR+G
Sbjct: 570 LPNSGTYNT----LIRARLRDG 587
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 86/168 (51%), Gaps = 12/168 (7%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
+D A+ LFG + P I+ +N ++ +N+ + + L E++ + + + T++I
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
I+ FC+ ++ A + +KM++ G + ++VT S L++GY S+ + A + ++M E
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 128 ISPN------------IAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
P+ + + +EA+ L D M++ G PD + T+ +
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 66/122 (54%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K L A+ +F L +EPDI TYN +I G C ++++ +LF L+ + PN
Sbjct: 478 LCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPN 537
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
I + +I FC++G ++A + KM E GP N TY+ LI + + +++ ++ +
Sbjct: 538 VIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIK 597
Query: 122 EM 123
EM
Sbjct: 598 EM 599
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K ++ +LF L+ +G+ P++I YNT+I G+C +EA L +K+ PNS
Sbjct: 515 KAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSG 574
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVT 99
T+ LI A ++G + + + +M G + T
Sbjct: 575 TYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 610
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 99/179 (55%), Gaps = 18/179 (10%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
KE L A KLF ++ R ++P+I+TYN++I G+C +RLDEA Q+F + P+ +
Sbjct: 322 KEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVV 381
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+ LI+ FCK ++ D +F M +G N VTY+ LI G+F++ + +A V+++M
Sbjct: 382 TYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQM 441
Query: 124 CENNISPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 170
+ + PNI G+ +AM +++ + ++ + PD + YN+ S G
Sbjct: 442 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPD------IYTYNIMSEG 494
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 98/180 (54%), Gaps = 12/180 (6%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K H+D AL LF ++ ++G+ PD+ TY+++I C+ R +A +L + ++ PN
Sbjct: 250 LCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPN 309
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+TF LIDAF KEG++ +A +F +M+++ N+VTY+ LI+G+ + A ++
Sbjct: 310 VVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFT 369
Query: 122 EMCENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSS 169
M + P++ A + + M+L+ M R G++ + + +TL Q+S
Sbjct: 370 LMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQAS 429
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 88/172 (51%), Gaps = 12/172 (6%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K D AL L ++ +E D++ Y+T+I C +D+A+ LF ++ ++P+
Sbjct: 215 LCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPD 274
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
T++ LI C GR DA+ + S MLE+ NVVT++ LID + K + A +++
Sbjct: 275 VFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFD 334
Query: 122 EMCENNISPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
EM + +I PNI R EA Q++ M+ +PD + +TL
Sbjct: 335 EMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTL 386
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 89/173 (51%), Gaps = 15/173 (8%)
Query: 6 CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
CH + A+ L Q+ + G +PD +T+ T++ G N+ EAV L E++ +P+
Sbjct: 146 CHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDL 205
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
+T+ +I+ CK G D A + +KM + +A+VV YS +ID K +++ A +++ E
Sbjct: 206 VTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTE 265
Query: 123 MCENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
M I P++ GR ++A +L ML I P+ + ++L D
Sbjct: 266 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLID 318
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 92/187 (49%), Gaps = 16/187 (8%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L + L AL + G++ G P I+T N+++ G+C NR+ EAV L +++ + +P+
Sbjct: 110 LCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPD 169
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
++TFT L+ + + +A + +M+ KG + ++VTY +I+G K A ++
Sbjct: 170 TVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLN 229
Query: 122 EMCENNISPNIAGRPT------------EAMQLYDSMLRNGIMPDGL----LLSTLADYN 165
+M + I ++ T +A+ L+ M GI PD L+S L +Y
Sbjct: 230 KMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG 289
Query: 166 LQSSGSQ 172
S S+
Sbjct: 290 RWSDASR 296
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 81/142 (57%), Gaps = 4/142 (2%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
D A +F Q+ G+ P+I+TYNT++ G C +L++A+ +FE L +++P+ T+ I+
Sbjct: 432 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIM 491
Query: 69 IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
+ CK G+++D +F + KG K +V+ Y+ +I G+ K + A+ ++ +M E+
Sbjct: 492 SEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGP 551
Query: 129 SPNIAGRPTEAMQLYDSMLRNG 150
P+ T L + LR+G
Sbjct: 552 LPDSGTYNT----LIRAHLRDG 569
Score = 76.6 bits (187), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 5/156 (3%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K L+ A+ +F L +EPDI TYN + G C ++++ LF L+ +KP+
Sbjct: 460 LCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPD 519
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
I + +I FCK+G ++A +F KM E GP + TY+ LI + + + ++ ++ +
Sbjct: 520 VIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIK 579
Query: 122 EMCENNISPNIAGRPTEAMQLYDSMLRNGIMPDGLL 157
EM S AG + L ML +G + G L
Sbjct: 580 EM----RSCRFAGDAS-TYGLVTDMLHDGRLDKGFL 610
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 86/169 (50%), Gaps = 12/169 (7%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
++LF ++ RGL + +TY T+I G+ + D A +F+++ + PN +T+ L+D
Sbjct: 399 GMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 458
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
CK G+++ A ++F + + + ++ TY+ + +G K+ ++ +D++ + + P
Sbjct: 459 GLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKP 518
Query: 131 NI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQ 167
++ G EA L+ M +G +PD +TL +L+
Sbjct: 519 DVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLR 567
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 22 GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
G+ ++ TYN +I C ++L A+ + K+ + P+ +T L++ FC R+ +A
Sbjct: 95 GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 154
Query: 82 TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIA-------- 133
+ +M+E G + + VT++ L+ G F+ A + E M P++
Sbjct: 155 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 214
Query: 134 ----GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
G P A+ L + M + I D ++ ST+ D
Sbjct: 215 LCKRGEPDLALNLLNKMEKGKIEADVVIYSTVID 248
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 74/159 (46%), Gaps = 12/159 (7%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
LD A+ LFG++ P I+ ++ ++ + + D + EK+ + + N T+ I
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
+I+ C+ ++ A + KM++ G ++VT + L++G+ + A + ++M E
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 128 ISPNIA------------GRPTEAMQLYDSMLRNGIMPD 154
P+ + +EA+ L + M+ G PD
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPD 204
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 12/144 (8%)
Query: 42 RLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYS 101
+LDEAV LF ++ + P+ + F+ L+ A K + D KM G N+ TY+
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 102 CLIDGYFKSQNMKSAFDVYEEMCENNISPNI------------AGRPTEAMQLYDSMLRN 149
+I+ + + A + +M + P+I R +EA+ L D M+
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 150 GIMPDGLLLSTLADYNLQSSGSQE 173
G PD + +TL Q + + E
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASE 188
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 106 bits (265), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 94/165 (56%), Gaps = 12/165 (7%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
+KE L A KL+ ++ R ++PDI TY+++I G+C +RLDEA +FE + PN
Sbjct: 336 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 395
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T+ LI FCK R+D+ +F +M ++G N VTY+ LI G+F+++ +A V++
Sbjct: 396 VVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFK 455
Query: 122 EMCENNISPNIA------------GRPTEAMQLYDSMLRNGIMPD 154
+M + + P+I G+ A+ +++ + R+ + PD
Sbjct: 456 QMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPD 500
Score = 96.7 bits (239), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 89/172 (51%), Gaps = 12/172 (6%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K +D AL L ++ +EP ++ YNTII C+ +++A+ LF ++ ++PN
Sbjct: 231 LCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPN 290
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T+ LI C GR DA+ + S M+E+ NVVT+S LID + K + A +Y+
Sbjct: 291 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 350
Query: 122 EMCENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
EM + +I P+I R EA +++ M+ P+ + +TL
Sbjct: 351 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 402
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 87/173 (50%), Gaps = 15/173 (8%)
Query: 6 CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
CH + A+ L GQ+ + G +PD T+NT+I G NR EAV L +++ +P+
Sbjct: 162 CHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDL 221
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
+T+ I+++ CK G +D A + KM + + VV Y+ +ID +N+ A +++ E
Sbjct: 222 VTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTE 281
Query: 123 MCENNISPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
M I PN+ GR ++A +L M+ I P+ + S L D
Sbjct: 282 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 334
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 12/172 (6%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L + A+ L ++ +G +PD++TY ++ G C +D A+ L +K+ +++P
Sbjct: 196 LFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPG 255
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+ + +IDA C ++DA +F++M KG + NVVTY+ LI A +
Sbjct: 256 VVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 315
Query: 122 EMCENNISPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
+M E I+PN+ G+ EA +LYD M++ I PD S+L
Sbjct: 316 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 367
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 47/204 (23%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+++ AL LF ++ ++G+ P+++TYN++I C+ R +A +L + ++ PN +TF+
Sbjct: 271 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 330
Query: 67 ILIDAFCKEG-----------------------------------RMDDATMMFSKMLEK 91
LIDAF KEG R+D+A MF M+ K
Sbjct: 331 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 390
Query: 92 GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIAGRPT------------EA 139
NVVTY+ LI G+ K++ + +++ EM + + N T A
Sbjct: 391 DCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNA 450
Query: 140 MQLYDSMLRNGIMPDGLLLSTLAD 163
++ M+ +G++PD + S L D
Sbjct: 451 QIVFKQMVSDGVLPDIMTYSILLD 474
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 91/185 (49%), Gaps = 16/185 (8%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
+ L AL + ++ G EPDI+T N+++ G+C NR+ +AV L ++ + +P+S
Sbjct: 128 RRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSF 187
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
TF LI + R +A + +M+ KG + ++VTY +++G K ++ A + ++M
Sbjct: 188 TFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKM 247
Query: 124 CENNISPNIAGRPT------------EAMQLYDSMLRNGIMPDGL----LLSTLADYNLQ 167
+ I P + T +A+ L+ M GI P+ + L+ L +Y
Sbjct: 248 EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 307
Query: 168 SSGSQ 172
S S+
Sbjct: 308 SDASR 312
Score = 80.5 bits (197), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 83/147 (56%), Gaps = 6/147 (4%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
+EC D A +F Q+ G+ PDI+TY+ ++ G C+ +++ A+ +FE L +++P+
Sbjct: 445 REC--DNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIY 502
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+ I+I+ CK G+++D +F + KG K NVVTY+ ++ G+ + + A ++ EM
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREM 562
Query: 124 CENNISPNIAGRPTEAMQLYDSMLRNG 150
E P+ T L + LR+G
Sbjct: 563 KEEGPLPDSGTYNT----LIRAHLRDG 585
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 89/176 (50%), Gaps = 12/176 (6%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K +D ++LF +++ RGL + +TY T+I G+ D A +F+++ + P+ +
Sbjct: 408 KAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIM 467
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T++IL+D C G+++ A ++F + + ++ TY+ +I+G K+ ++ +D++ +
Sbjct: 468 TYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 527
Query: 124 CENNISPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQ 167
+ PN+ G EA L+ M G +PD +TL +L+
Sbjct: 528 SLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLR 583
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 68/116 (58%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
++ AL +F L +EPDI TYN +I G C ++++ LF L+ +KPN +T+T
Sbjct: 482 VETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 541
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
++ FC++G ++A +F +M E+GP + TY+ LI + + + ++ ++ EM
Sbjct: 542 MMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 82/164 (50%), Gaps = 12/164 (7%)
Query: 3 IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
+ + LD A+ LFG + P I+ ++ ++ +N+ D + L E++ + + N
Sbjct: 57 LNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNL 116
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
T++ILI+ FC+ ++ A + +KM++ G + ++VT + L++G+ + A + +
Sbjct: 117 YTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQ 176
Query: 123 MCENNISPN-------IAG-----RPTEAMQLYDSMLRNGIMPD 154
M E P+ I G R +EA+ L D M+ G PD
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPD 220
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 77/168 (45%), Gaps = 12/168 (7%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
D + L Q+ + G+ ++ TY+ +I +C ++L A+ + K+ + +P+ +T
Sbjct: 97 FDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNS 156
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
L++ FC R+ DA + +M+E G + + T++ LI G F+ A + + M
Sbjct: 157 LLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG 216
Query: 128 ISPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
P++ G A+ L M + I P ++ +T+ D
Sbjct: 217 CQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIID 264
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 106 bits (264), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 100/181 (55%), Gaps = 18/181 (9%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
+KE L A KL+ ++ R ++P I+TY+++I G+C +RLDEA Q+FE + P+
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T+ LI FCK R+++ +F +M ++G N VTY+ LI G F++ + A ++++
Sbjct: 396 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 455
Query: 122 EMCENNISPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSS 169
EM + + PNI G+ +AM +++ + R+ + P T+ YN+
Sbjct: 456 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP------TIYTYNIMIE 509
Query: 170 G 170
G
Sbjct: 510 G 510
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 89/172 (51%), Gaps = 12/172 (6%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K D A L ++ LEP ++ YNTII G C +D+A+ LF+++ ++PN
Sbjct: 231 LCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPN 290
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T++ LI C GR DA+ + S M+E+ +V T+S LID + K + A +Y+
Sbjct: 291 VVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD 350
Query: 122 EMCENNISPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
EM + +I P+I R EA Q+++ M+ PD + +TL
Sbjct: 351 EMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTL 402
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 80/163 (49%), Gaps = 12/163 (7%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A+ L ++ +G +PD++TY ++ G C D A L K+ +L+P + + +ID
Sbjct: 205 AMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIID 264
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
CK MDDA +F +M KG + NVVTYS LI A + +M E I+P
Sbjct: 265 GLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINP 324
Query: 131 NI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
++ G+ EA +LYD M++ I P + S+L
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 367
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 47/209 (22%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K H+D AL LF ++ +G+ P+++TY+++I C+ R +A +L + ++ P+
Sbjct: 266 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 325
Query: 62 SITFTILIDAFCKEG-----------------------------------RMDDATMMFS 86
TF+ LIDAF KEG R+D+A MF
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 385
Query: 87 KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE-----NNISPNI-------AG 134
M+ K +VVTY+ LI G+ K + ++ +V+ EM + N ++ NI AG
Sbjct: 386 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 445
Query: 135 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
A +++ M+ +G+ P+ + +TL D
Sbjct: 446 DCDMAQEIFKEMVSDGVPPNIMTYNTLLD 474
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 76/123 (61%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
D A ++F ++ G+ P+I+TYNT++ G C +L++A+ +FE L +++P T+ I+
Sbjct: 448 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 507
Query: 69 IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
I+ CK G+++D +F + KG K +VV Y+ +I G+ + + + A +++EM E+
Sbjct: 508 IEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGT 567
Query: 129 SPN 131
PN
Sbjct: 568 LPN 570
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 92/185 (49%), Gaps = 16/185 (8%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
+ L AL + G++ G EP+I+T ++++ GYC R+ EAV L +++ +PN++
Sbjct: 128 RRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTV 187
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
TF LI + +A + +M+ KG + ++VTY +++G K + AF++ +M
Sbjct: 188 TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM 247
Query: 124 CENNISPNIAGRPT------------EAMQLYDSMLRNGIMPDGL----LLSTLADYNLQ 167
+ + P + T +A+ L+ M GI P+ + L+S L +Y
Sbjct: 248 EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 307
Query: 168 SSGSQ 172
S S+
Sbjct: 308 SDASR 312
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 83/164 (50%), Gaps = 12/164 (7%)
Query: 3 IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
+ E LD A+ LFG++ P II ++ ++ +N+ D + L E++ + + N
Sbjct: 57 LSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNH 116
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
T++ILI+ FC+ ++ A + KM++ G + N+VT S L++GY S+ + A + ++
Sbjct: 117 YTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ 176
Query: 123 MCENNISPN------------IAGRPTEAMQLYDSMLRNGIMPD 154
M PN + + +EAM L D M+ G PD
Sbjct: 177 MFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPD 220
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 86/173 (49%), Gaps = 12/173 (6%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
++ +++F +++ RGL + +TYN +I G D A ++F+++ + PN +T+
Sbjct: 411 RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYN 470
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
L+D CK G+++ A ++F + + + TY+ +I+G K+ ++ +D++ +
Sbjct: 471 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK 530
Query: 127 NISPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQ 167
+ P++ G EA L+ M +G +P+ +TL L+
Sbjct: 531 GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLR 583
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 65/122 (53%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K L+ A+ +F L +EP I TYN +I G C ++++ LF L+ +KP+
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 535
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+ + +I FC++G ++A +F +M E G N Y+ LI + + +++ ++ +
Sbjct: 536 VVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIK 595
Query: 122 EM 123
EM
Sbjct: 596 EM 597
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 75/168 (44%), Gaps = 12/168 (7%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
D + L Q+ + G+ + TY+ +I +C ++L A+ + K+ + +PN +T +
Sbjct: 97 FDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSS 156
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
L++ +C R+ +A + +M G + N VT++ LI G F A + + M
Sbjct: 157 LLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG 216
Query: 128 ISPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
P++ G A L + M + + P L+ +T+ D
Sbjct: 217 CQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIID 264
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K ++ LF L+ +G++PD++ YNT+I G+C +EA LF+++ PNS
Sbjct: 513 KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSG 572
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVT 99
+ LI A ++G + + + +M G + T
Sbjct: 573 CYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 608
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 95/172 (55%), Gaps = 12/172 (6%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
KE ++ A K+F ++T R L+P ++++NT+I GYC + LDE +L ++ + +P+
Sbjct: 252 KEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVF 311
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T++ LI+A CKE +MD A +F +M ++G N V ++ LI G+ ++ + + Y++M
Sbjct: 312 TYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKM 371
Query: 124 CENNISPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
+ P+I G A + D M+R G+ PD + +TL D
Sbjct: 372 LSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLID 423
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 91/174 (52%), Gaps = 12/174 (6%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L KE +D A LF ++ RGL P+ + + T+I G+ +D + ++K+ L+P+
Sbjct: 320 LCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPD 379
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+ + L++ FCK G + A + M+ +G + + +TY+ LIDG+ + ++++A ++ +
Sbjct: 380 IVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRK 439
Query: 122 EMCENNISPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
EM +N I + GR +A + MLR GI PD + + + D
Sbjct: 440 EMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMD 493
Score = 87.0 bits (214), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 96/185 (51%), Gaps = 12/185 (6%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K L AA + + RGL PD ITY T+I G+C ++ A+++ +++ ++ + +
Sbjct: 392 KNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRV 451
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
F+ L+ CKEGR+ DA +ML G K + VTY+ ++D + K + ++ F + +EM
Sbjct: 452 GFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEM 511
Query: 124 CENNISPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGS 171
+ P++ G+ A L D+ML G++PD + +TL + + + + S
Sbjct: 512 QSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANS 571
Query: 172 QEHCI 176
+ I
Sbjct: 572 SKRYI 576
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 81/162 (50%), Gaps = 12/162 (7%)
Query: 14 LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
+ ++ D G ++ +N ++ +C + +A ++F+++T L+P ++F LI+ +C
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYC 286
Query: 74 KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN-- 131
K G +D+ + +M + + +V TYS LI+ K M A +++EMC+ + PN
Sbjct: 287 KVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDV 346
Query: 132 -----IAGRPTEA-----MQLYDSMLRNGIMPDGLLLSTLAD 163
I G + Y ML G+ PD +L +TL +
Sbjct: 347 IFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVN 388
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 95/165 (57%), Gaps = 12/165 (7%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
+K+ L A KL+ ++ R ++P+I TY+++I G+C L+RL EA Q+ E + PN
Sbjct: 333 FVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPN 392
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T+ LI+ FCK R+D +F +M ++G N VTY+ LI G+F++++ +A V++
Sbjct: 393 VVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 452
Query: 122 EMCENNISPNIA------------GRPTEAMQLYDSMLRNGIMPD 154
+M + PNI G+ +AM +++ + R+ + PD
Sbjct: 453 QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 497
Score = 97.1 bits (240), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 90/174 (51%), Gaps = 12/174 (6%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K D AL L ++ +E +++ Y+T+I C D+A+ LF ++ ++PN
Sbjct: 228 LCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 287
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
IT++ LI C GR DA+ + S M+E+ N+VT+S LID + K + A +YE
Sbjct: 288 VITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYE 347
Query: 122 EMCENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
EM + +I PNI R EA Q+ + M+R +P+ + +TL +
Sbjct: 348 EMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLIN 401
Score = 90.1 bits (222), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 12/165 (7%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A+ L ++ RG +PD++TY ++ G C D A+ L K+ +++ N + ++ +ID
Sbjct: 202 AVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVID 261
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
+ CK DDA +F++M KG + NV+TYS LI A + +M E I+P
Sbjct: 262 SLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINP 321
Query: 131 NIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
N+ G+ +A +LY+ M++ I P+ S+L +
Sbjct: 322 NLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLIN 366
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 89/173 (51%), Gaps = 16/173 (9%)
Query: 16 GQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKE 75
G++ G EPDI+T N+++ G+C NR+ +AV L +++ + KP+++TFT LI
Sbjct: 137 GKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLH 196
Query: 76 GRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIAGR 135
+ +A + +M+++G + ++VTY +++G K + A ++ +M I N+
Sbjct: 197 NKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIY 256
Query: 136 PT------------EAMQLYDSMLRNGIMPDGL----LLSTLADYNLQSSGSQ 172
T +A+ L+ M G+ P+ + L+S L +Y S S+
Sbjct: 257 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASR 309
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 47/209 (22%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K H D AL LF ++ ++G+ P++ITY+++I C+ R +A +L + ++ PN
Sbjct: 263 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPN 322
Query: 62 SITFTILIDAFCKEG-----------------------------------RMDDATMMFS 86
+TF+ LIDAF K+G R+ +A M
Sbjct: 323 LVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLE 382
Query: 87 KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIAGRPT--------- 137
M+ K NVVTY+ LI+G+ K++ + +++ EM + + N T
Sbjct: 383 LMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 442
Query: 138 ---EAMQLYDSMLRNGIMPDGLLLSTLAD 163
A ++ M+ G+ P+ L + L D
Sbjct: 443 DCDNAQMVFKQMVSVGVHPNILTYNILLD 471
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 63/111 (56%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K +D ++LF +++ RGL + +TY T+I G+ D A +F+++ V + PN +
Sbjct: 405 KAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 464
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMK 114
T+ IL+D CK G++ A ++F + + ++ TY+ +I+G K+ K
Sbjct: 465 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 80/164 (48%), Gaps = 12/164 (7%)
Query: 3 IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
+ + LD A+ LFG + P II ++ ++ +N+ D + EK+ + + N
Sbjct: 54 LSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNL 113
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
T+ ILI+ FC+ R+ A + KM++ G + ++VT + L++G+ + A + ++
Sbjct: 114 YTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQ 173
Query: 123 MCENNISPN------------IAGRPTEAMQLYDSMLRNGIMPD 154
M E P+ + + +EA+ L D M++ G PD
Sbjct: 174 MVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPD 217
Score = 30.8 bits (68), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNR 42
L K L A+ +F L +EPDI TYN +I G C +
Sbjct: 473 LCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 93/172 (54%), Gaps = 12/172 (6%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K LD A LF ++ +G+ +IITYN +I G+C+ R D+ +L + ++ PN
Sbjct: 273 LCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPN 332
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+TF++LID+F KEG++ +A + +M+ +G + +TY+ LIDG+ K ++ A + +
Sbjct: 333 VVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVD 392
Query: 122 EMCENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
M PNI A R + ++L+ M G++ D + +TL
Sbjct: 393 LMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTL 444
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 76/132 (57%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
+KE L A +L ++ RG+ PD ITY ++I G+C N LD+A Q+ + + PN
Sbjct: 343 FVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPN 402
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
TF ILI+ +CK R+DD +F KM +G A+ VTY+ LI G+ + + A ++++
Sbjct: 403 IRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQ 462
Query: 122 EMCENNISPNIA 133
EM + PNI
Sbjct: 463 EMVSRKVPPNIV 474
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 91/162 (56%), Gaps = 12/162 (7%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
KE HLD A ++ + +G +P+I T+N +I GYC NR+D+ ++LF K++ + +++
Sbjct: 380 KENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTV 439
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+ LI FC+ G+++ A +F +M+ + N+VTY L+DG + + A +++E++
Sbjct: 440 TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499
Query: 124 CENNISPNI------------AGRPTEAMQLYDSMLRNGIMP 153
++ + +I A + +A L+ S+ G+ P
Sbjct: 500 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 541
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 94/181 (51%), Gaps = 12/181 (6%)
Query: 5 ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
E + AL+L ++ + G +PD+IT NT++ G C + EA+ L +K+ +PN++T
Sbjct: 171 EGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVT 230
Query: 65 FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
+ +++ CK G+ A + KM E+ K + V YS +IDG K ++ +AF+++ EM
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEME 290
Query: 125 ENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQ 172
I+ NI AGR + +L M++ I P+ + S L D ++ +
Sbjct: 291 MKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLR 350
Query: 173 E 173
E
Sbjct: 351 E 351
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 90/175 (51%), Gaps = 12/175 (6%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K +D L+LF +++ RG+ D +TYNT+I G+C L +L+ A +LF+++ ++ PN +
Sbjct: 415 KANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIV 474
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+ IL+D C G + A +F K+ + + ++ Y+ +I G + + A+D++ +
Sbjct: 475 TYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 534
Query: 124 CENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNL 166
+ P + G +EA L+ M +G PDG + L +L
Sbjct: 535 PLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHL 589
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 68/121 (56%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A++L ++ +R ++ D + Y+ II G C LD A LF ++ + N IT+ ILI
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 306
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
FC GR DD + M+++ NVVT+S LID + K ++ A ++++EM I+P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 366
Query: 131 N 131
+
Sbjct: 367 D 367
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 63/115 (54%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
+ AL++F ++ +E DI YN II G C+ +++D+A LF L +KP T+ I+
Sbjct: 490 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIM 549
Query: 69 IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
I CK+G + +A ++F KM E G + TY+ LI + + + + EE+
Sbjct: 550 IGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEEL 604
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 12/167 (7%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
D L L Q+ +G+ ++ T + +I +C +L A K+ + +PN+ITF+ L
Sbjct: 105 DLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTL 164
Query: 69 IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
I+ C EGR+ +A + +M+E G K +++T + L++G S A + ++M E
Sbjct: 165 INGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGC 224
Query: 129 SPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
PN +G+ AM+L M I D + S + D
Sbjct: 225 QPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 72/160 (45%), Gaps = 12/160 (7%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
D A+ LF + P +I ++ + + D + L +++ + N T +I+
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 69 IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
I+ FC+ ++ A K+++ G + N +T+S LI+G + A ++ + M E
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189
Query: 129 SPN------------IAGRPTEAMQLYDSMLRNGIMPDGL 156
P+ ++G+ EAM L D M+ G P+ +
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAV 229
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 51/112 (45%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
+D A LF L +G++P + TYN +I G C L EA LF K+ P+ T+ I
Sbjct: 524 VDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNI 583
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
LI A +G + + ++ G + T +ID + KS D+
Sbjct: 584 LIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKSFLDM 635
Score = 30.8 bits (68), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K+ L A LF ++ + G PD TYN +I + ++V+L E+L +
Sbjct: 553 LCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVD 612
Query: 62 SITFTILIDAFCKEGRM 78
+ T ++ID +GR+
Sbjct: 613 ASTIKMVIDML-SDGRL 628
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 95/172 (55%), Gaps = 12/172 (6%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
+KE A KL+ + R ++PDI TYN+++ G+C +RLD+A Q+FE + P+
Sbjct: 340 FVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPD 399
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T+ LI FCK R++D T +F +M +G + VTY+ LI G F + +A V++
Sbjct: 400 VVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 459
Query: 122 EMCENNISPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
+M + + P+I G+ +A++++D M ++ I D + +T+
Sbjct: 460 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 511
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 12/172 (6%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K D AL L ++ +E D++ +NTII C +D+A+ LF+++ ++PN
Sbjct: 235 LCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 294
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T++ LI C GR DA+ + S M+EK N+VT++ LID + K A +Y+
Sbjct: 295 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYD 354
Query: 122 EMCENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
+M + +I P+I R +A Q+++ M+ PD + +TL
Sbjct: 355 DMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTL 406
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 12/165 (7%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A+ L ++ RG +P+++TY ++ G C D A+ L K+ +++ + + F +ID
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIID 268
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
+ CK +DDA +F +M KG + NVVTYS LI A + +M E I+P
Sbjct: 269 SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP 328
Query: 131 NIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
N+ G+ EA +LYD M++ I PD ++L +
Sbjct: 329 NLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVN 373
Score = 90.1 bits (222), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 47/209 (22%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K H+D AL LF ++ +G+ P+++TY+++I CS R +A QL + ++ PN
Sbjct: 270 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 329
Query: 62 SITFTILIDAFCKEG-----------------------------------RMDDATMMFS 86
+TF LIDAF KEG R+D A MF
Sbjct: 330 LVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE 389
Query: 87 KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIAGRPT--------- 137
M+ K +VVTY+ LI G+ KS+ ++ +++ EM + + T
Sbjct: 390 FMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 449
Query: 138 ---EAMQLYDSMLRNGIMPDGLLLSTLAD 163
A +++ M+ +G+ PD + S L D
Sbjct: 450 DCDNAQKVFKQMVSDGVPPDIMTYSILLD 478
Score = 86.3 bits (212), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 88/173 (50%), Gaps = 15/173 (8%)
Query: 6 CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
CH + A+ L Q+ + G PD IT+ T+I G N+ EAV L +++ +PN
Sbjct: 166 CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 225
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
+T+ ++++ CK G D A + +KM +A+VV ++ +ID K +++ A ++++E
Sbjct: 226 VTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKE 285
Query: 123 MCENNISPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
M I PN+ GR ++A QL M+ I P+ + + L D
Sbjct: 286 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 338
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 83/142 (58%), Gaps = 4/142 (2%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
D A K+F Q+ G+ PDI+TY+ ++ G C+ +L++A+++F+ + ++K + +T +
Sbjct: 452 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 511
Query: 69 IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
I+ CK G++DD +F + KG K NVVTY+ +I G + ++ A+ + ++M E+
Sbjct: 512 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 571
Query: 129 SPNIAGRPTEAMQLYDSMLRNG 150
PN T L + LR+G
Sbjct: 572 LPNSGTYNT----LIRAHLRDG 589
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 91/185 (49%), Gaps = 16/185 (8%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
+ + AL L G++ G EP I+T ++++ GYC R+ +AV L +++ + +P++I
Sbjct: 132 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 191
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
TFT LI + +A + +M+++G + N+VTY +++G K + A ++ +M
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM 251
Query: 124 CENNISPNIAGRPT------------EAMQLYDSMLRNGIMPDGL----LLSTLADYNLQ 167
I ++ T +A+ L+ M GI P+ + L+S L Y
Sbjct: 252 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 311
Query: 168 SSGSQ 172
S SQ
Sbjct: 312 SDASQ 316
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 81/164 (49%), Gaps = 12/164 (7%)
Query: 3 IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
+ + LD A+ LFG + P I+ +N ++ + + D + L EK+ +++
Sbjct: 61 LHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGL 120
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
T+ ILI+ FC+ ++ A + KM++ G + ++VT S L++GY + + A + ++
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 123 MCENNISPN------------IAGRPTEAMQLYDSMLRNGIMPD 154
M E P+ + + +EA+ L D M++ G P+
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 224
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 86/176 (48%), Gaps = 12/176 (6%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K ++ +LF +++ RGL D +TY T+I G D A ++F+++ + P+ +
Sbjct: 412 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 471
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T++IL+D C G+++ A +F M + K ++ Y+ +I+G K+ + +D++ +
Sbjct: 472 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 531
Query: 124 CENNISPNIAGRPT------------EAMQLYDSMLRNGIMPDGLLLSTLADYNLQ 167
+ PN+ T EA L M +G +P+ +TL +L+
Sbjct: 532 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLR 587
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 61/116 (52%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
L+ AL++F + ++ DI Y T+I G C ++D+ LF L+ +KPN +T+
Sbjct: 486 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 545
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
+I C + + +A + KM E GP N TY+ LI + + + ++ ++ EM
Sbjct: 546 MISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 12/147 (8%)
Query: 29 TYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
TYN +I +C +++ A+ L K+ + +P+ +T + L++ +C R+ DA + +M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 89 LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIA------------GRP 136
+E G + + +T++ LI G F A + + M + PN+ G
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 137 TEAMQLYDSMLRNGIMPDGLLLSTLAD 163
A+ L + M I D ++ +T+ D
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIID 268
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K +D LF L+ +G++P+++TYNT+I G CS L EA L +K+ PNS
Sbjct: 517 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSG 576
Query: 64 TFTILIDAFCKEG 76
T+ LI A ++G
Sbjct: 577 TYNTLIRAHLRDG 589
>sp|Q9ZU27|PPR76_ARATH Pentatricopeptide repeat-containing protein At1g51965,
mitochondrial OS=Arabidopsis thaliana GN=At1g51965 PE=2
SV=1
Length = 650
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 90/172 (52%), Gaps = 12/172 (6%)
Query: 14 LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
LF ++ G PDI TYN +I + + +DEA+ +FE+L KP+ I++ LI+
Sbjct: 464 LFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLG 523
Query: 74 KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIA 133
K G +D+A + F +M EKG +VVTYS L++ + K++ ++ A+ ++EEM PNI
Sbjct: 524 KNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIV 583
Query: 134 ------------GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 173
GR EA+ LY M + G+ PD + + L S G
Sbjct: 584 TYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLERLQSVSHGKSR 635
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 73/124 (58%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
+D A+ +F +L +PDII+YN++I +DEA F+++ L P+ +T++
Sbjct: 493 VDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYST 552
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
L++ F K R++ A +F +ML KG + N+VTY+ L+D K+ A D+Y +M +
Sbjct: 553 LMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQG 612
Query: 128 ISPN 131
++P+
Sbjct: 613 LTPD 616
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 61/102 (59%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K +D A F ++ ++GL PD++TY+T++ + R++ A LFE++ +PN
Sbjct: 522 LGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPN 581
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCL 103
+T+ IL+D K GR +A ++SKM ++G + +TY+ L
Sbjct: 582 IVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A ++ ++ G + DI YN ++ +L + ++A Q+FE + + + T+TI+I
Sbjct: 222 AFDVYCEIRRGGHKLDIFAYNMLLD---ALAKDEKACQVFEDMKKRHCRRDEYTYTIMIR 278
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
+ G+ D+A +F++M+ +G NVV Y+ L+ K + + A V+ M E P
Sbjct: 279 TMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRP 338
Query: 131 N 131
N
Sbjct: 339 N 339
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 79/174 (45%), Gaps = 12/174 (6%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K H+ A +LF + ++ + +Y +++ C + EA+++ K+ + +
Sbjct: 382 LSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTD 441
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
++ + + A K ++ +F KM + GP ++ TY+ LI + + + A +++E
Sbjct: 442 TMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFE 501
Query: 122 EMCENNISPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
E+ ++ P+I G EA + M G+ PD + STL +
Sbjct: 502 ELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLME 555
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 78/168 (46%), Gaps = 21/168 (12%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
D A+ LF ++ GL +++ YNT++ +D+A+Q+F ++ +PN T+++L
Sbjct: 287 DEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLL 346
Query: 69 IDAFCKEG---RMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
++ EG R+D + + + +G YS L+ K ++ A ++ +M
Sbjct: 347 LNLLVAEGQLVRLDGVVEISKRYMTQG------IYSYLVRTLSKLGHVSEAHRLFCDMWS 400
Query: 126 NNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
+ AG+ EA+++ + G++ D ++ +T+
Sbjct: 401 FPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTV 448
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
+ A ++F + R D TY +I + + DEAV LF ++ L N + + L
Sbjct: 252 EKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTL 311
Query: 69 IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLID 105
+ K +D A +FS+M+E G + N TYS L++
Sbjct: 312 MQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLN 348
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 73/160 (45%), Gaps = 18/160 (11%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
LD +++ + +G+ Y+ ++ L + EA +LF + +K ++
Sbjct: 358 RLDGVVEISKRYMTQGI------YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYM 411
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
++++ C G+ +A M SK+ EKG + + Y+ + K + + D++E+M ++
Sbjct: 412 SMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKD 471
Query: 127 NISPNI------------AGRPTEAMQLYDSMLRNGIMPD 154
SP+I G EA+ +++ + R+ PD
Sbjct: 472 GPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPD 511
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 6/101 (5%)
Query: 26 DIITYNTIICGYCSLN---RLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDAT 82
D YN II N R D + + + + N T ILI F G +D
Sbjct: 132 DPFLYNRIILILSRSNLPDRFDRVRSILDSMVKSNVHGNISTVNILIGFF---GNTEDLQ 188
Query: 83 MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
M + + K N TY CL+ Y +S++ AFDVY E+
Sbjct: 189 MCLRLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEI 229
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 102/194 (52%), Gaps = 31/194 (15%)
Query: 1 MLIK---ECH-LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEA---------- 46
+LIK +CH L +L FG+LT G +PD++T+NT++ G C +R+ EA
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205
Query: 47 -----VQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYS 101
V LF+++ + L P ITF LI+ C EGR+ +A + +KM+ KG +VVTY
Sbjct: 206 GFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 102 CLIDGYFKSQNMKSAFDVYEEMCENNISPNIA------------GRPTEAMQLYDSMLRN 149
+++G K + KSA ++ +M E +I P++ G ++A L+ ML
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 150 GIMPDGLLLSTLAD 163
GI P+ + + D
Sbjct: 326 GIAPNVFTYNCMID 339
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 85/163 (52%), Gaps = 12/163 (7%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A L ++ +GL D++TY TI+ G C + A+ L K+ +KP+ + ++ +ID
Sbjct: 245 AAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIID 304
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
CK+G DA +FS+MLEKG NV TY+C+IDG+ A + +M E I+P
Sbjct: 305 RLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP 364
Query: 131 NI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
++ G+ EA +L D ML I PD + +++
Sbjct: 365 DVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSM 407
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 87/172 (50%), Gaps = 16/172 (9%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K+ H A LF ++ ++G+ P++ TYN +I G+CS R +A +L + ++ P+
Sbjct: 306 LCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD 365
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+TF LI A KEG++ +A + +ML + + VTY+ +I G+ K A +++
Sbjct: 366 VLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFD 425
Query: 122 EMCENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
M SP++ A R E MQL + R G++ + +TL
Sbjct: 426 LMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473
Score = 80.1 bits (196), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 87/169 (51%), Gaps = 12/169 (7%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+L+AA LF ++ G+ PD IT N ++ G+C +L+EA++LFE + ++ +++ +
Sbjct: 482 NLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYN 541
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
I+I CK ++D+A +F + G + +V TY+ +I G+ + A ++ +M +N
Sbjct: 542 IIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDN 601
Query: 127 NISPN------------IAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
P+ AG ++++L M NG D + +AD
Sbjct: 602 GHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD 650
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 86/166 (51%), Gaps = 12/166 (7%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
+D ++L +++ RGL + TYNT+I G+C ++ L+ A LF+++ + P++IT I
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 507
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
L+ FC+ ++++A +F + + V Y+ +I G K + A+D++ + +
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 567
Query: 128 ISPNIA----------GRP--TEAMQLYDSMLRNGIMPDGLLLSTL 161
+ P++ G+ ++A L+ M NG PD +TL
Sbjct: 568 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTL 613
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 91/179 (50%), Gaps = 22/179 (12%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K D A +F D PD++T+NTII YC R+DE +QL +++ L N+
Sbjct: 413 KHNRFDDAKHMF----DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTT 468
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE-- 121
T+ LI FC+ ++ A +F +M+ G + +T + L+ G+ +++ ++ A +++E
Sbjct: 469 TYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVI 528
Query: 122 EMCE---NNISPNI-------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 170
+M + + ++ NI + EA L+ S+ +G+ PD + YN+ SG
Sbjct: 529 QMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPD------VQTYNVMISG 581
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 16/166 (9%)
Query: 10 AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
+AL L ++ + ++PD++ Y+ II C +A LF ++ + PN T+ +I
Sbjct: 279 SALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMI 338
Query: 70 DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
D FC GR DA + M+E+ +V+T++ LI K + A + +EM I
Sbjct: 339 DGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIF 398
Query: 130 PNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
P+ R +A ++D M PD + +T+ D
Sbjct: 399 PDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIID 440
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K +D A LF L G+EPD+ TYN +I G+C + + +A LF K+ +P++
Sbjct: 549 KGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNS 608
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLID 105
T+ LI K G +D + + S+M G + T + D
Sbjct: 609 TYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD 650
Score = 56.6 bits (135), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 8/154 (5%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
LD A+ F + + N +I + +NR D A+ L+ K+ ++ N +F I
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
LI FC ++ + F K+ + G + +VVT++ L+ G + A ++ M E
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 128 ISPNIAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
EA+ L+D M+ G+ P + +TL
Sbjct: 207 F--------LEAVALFDQMVEIGLTPVVITFNTL 232
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 103 bits (256), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 91/167 (54%), Gaps = 12/167 (7%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+ AL + G++ G EPD +T +++ G+C NR+ +AV L +K+ + KP+ + +
Sbjct: 135 QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYN 194
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
+ID+ CK R++DA F ++ KG + NVVTY+ L++G S A + +M +
Sbjct: 195 AIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK 254
Query: 127 NISPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
I+PN+ G+ EA +L++ M+R I PD + S+L
Sbjct: 255 KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Score = 100 bits (248), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 88/163 (53%), Gaps = 12/163 (7%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A+ L ++ + G +PDI+ YN II C R+++A F+++ ++PN +T+T L++
Sbjct: 174 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 233
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
C R DA + S M++K NV+TYS L+D + K+ + A +++EEM +I P
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293
Query: 131 NIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
+I R EA Q++D M+ G + D + +TL
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTL 336
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 80/131 (61%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
+K + A +LF ++ ++PDI+TY+++I G C +R+DEA Q+F+ + +
Sbjct: 270 FVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLAD 329
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+++ LI+ FCK R++D +F +M ++G +N VTY+ LI G+F++ ++ A + +
Sbjct: 330 VVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFS 389
Query: 122 EMCENNISPNI 132
+M ISP+I
Sbjct: 390 QMDFFGISPDI 400
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 89/174 (51%), Gaps = 12/174 (6%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
++K D + L ++ G+ D+ T+N +I +C ++ A+ + K+ + +P+
Sbjct: 95 IVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPD 154
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T L++ FC+ R+ DA + KM+E G K ++V Y+ +ID K++ + AFD ++
Sbjct: 155 RVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFK 214
Query: 122 EMCENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
E+ I PN+ + R ++A +L M++ I P+ + S L D
Sbjct: 215 EIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLD 268
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 89/169 (52%), Gaps = 16/169 (9%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A +L + + + P++ITY+ ++ + ++ EA +LFE++ + + P+ +T++ LI+
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
C R+D+A MF M+ KG A+VV+Y+ LI+G+ K++ ++ ++ EM + +
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363
Query: 131 NI------------AGRPTEAMQLYDSMLRNGIMPD----GLLLSTLAD 163
N AG +A + + M GI PD +LL L D
Sbjct: 364 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCD 412
Score = 80.5 bits (197), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 88/172 (51%), Gaps = 12/172 (6%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K ++ A F ++ +G+ P+++TY ++ G C+ +R +A +L + ++ PN
Sbjct: 200 LCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPN 259
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
IT++ L+DAF K G++ +A +F +M+ ++VTYS LI+G + A +++
Sbjct: 260 VITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFD 319
Query: 122 EMCENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
M ++ A R + M+L+ M + G++ + + +TL
Sbjct: 320 LMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTL 371
Score = 80.1 bits (196), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+D A ++F + +G D+++YNT+I G+C R+++ ++LF +++ L N++T+
Sbjct: 310 RIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYN 369
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
LI F + G +D A FS+M G ++ TY+ L+ G + ++ A ++E+M +
Sbjct: 370 TLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR 429
Query: 127 NISPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
+ +I G+ EA L+ S+ G+ PD + +T+
Sbjct: 430 EMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTM 476
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 12/168 (7%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K ++ +KLF +++ RGL + +TYNT+I G+ +D+A + F ++ + P+
Sbjct: 342 KAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIW 401
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+ IL+ C G ++ A ++F M ++ ++VTY+ +I G K+ ++ A+ ++ +
Sbjct: 402 TYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSL 461
Query: 124 CENNISPNIAGRPT------------EAMQLYDSMLRNGIMPDGLLLS 159
+ P+I T E LY M + G+M + LS
Sbjct: 462 SLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 92/175 (52%), Gaps = 16/175 (9%)
Query: 14 LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
G++ G EPD++T+ +++ GYC NR+++A+ LF+++ + KPN +T+T LI C
Sbjct: 140 FLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLC 199
Query: 74 KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI- 132
K ++ A +F++M G + NVVTY+ L+ G + A + +M + I PN+
Sbjct: 200 KNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVI 259
Query: 133 -----------AGRPTEAMQLYDSMLRNGIMPD----GLLLSTLADYNLQSSGSQ 172
G+ EA +LY+ M++ + PD G L++ L Y L Q
Sbjct: 260 TFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQ 314
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 91/171 (53%), Gaps = 15/171 (8%)
Query: 6 CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
CH ++ A+ LF Q+ G +P+++TY T+I C L+ AV+LF ++ +PN
Sbjct: 164 CHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNV 223
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
+T+ L+ C+ GR DA + M+++ + NV+T++ LID + K + A ++Y
Sbjct: 224 VTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNV 283
Query: 123 MCENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
M + ++ P++ G EA Q++ M RNG P+ ++ +TL
Sbjct: 284 MIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTL 334
Score = 90.1 bits (222), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 90/209 (43%), Gaps = 47/209 (22%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K HL+ A++LF Q+ G P+++TYN ++ G C + R +A L + +++PN
Sbjct: 198 LCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPN 257
Query: 62 SITFTILIDAFCKEGR-----------------------------------MDDATMMFS 86
ITFT LIDAF K G+ +D+A MF
Sbjct: 258 VITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFY 317
Query: 87 KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN------------IAG 134
M G N V Y+ LI G+ KS+ ++ ++ EM + + N + G
Sbjct: 318 LMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVG 377
Query: 135 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
RP A ++++ M PD + L D
Sbjct: 378 RPDVAQEVFNQMSSRRAPPDIRTYNVLLD 406
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 75/123 (60%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
D A ++F Q++ R PDI TYN ++ G C ++++A+ +FE + ++ N +T+TI+
Sbjct: 380 DVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTII 439
Query: 69 IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
I CK G+++DA +F + KG K NV+TY+ +I G+ + + A ++++M E+
Sbjct: 440 IQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGF 499
Query: 129 SPN 131
PN
Sbjct: 500 LPN 502
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 86/163 (52%), Gaps = 12/163 (7%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K ++ +K+F +++ +G+ + ITY +I GYC + R D A ++F +++ + P+
Sbjct: 340 KSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIR 399
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+ +L+D C G+++ A M+F M ++ N+VTY+ +I G K ++ AFD++ +
Sbjct: 400 TYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSL 459
Query: 124 CENNISPNIAGRPT------------EAMQLYDSMLRNGIMPD 154
+ PN+ T EA L+ M +G +P+
Sbjct: 460 FSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 88/166 (53%), Gaps = 12/166 (7%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
LD A ++F + G P+ + Y T+I G+C R+++ +++F +++ + N+IT+T+
Sbjct: 309 LDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTV 368
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
LI +C GR D A +F++M + ++ TY+ L+DG + ++ A ++E M +
Sbjct: 369 LIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKRE 428
Query: 128 ISPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
+ NI G+ +A L+ S+ G+ P+ + +T+
Sbjct: 429 MDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTM 474
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 83/167 (49%), Gaps = 12/167 (7%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
D + LF Q+ G+ P + T N ++ C ++ A K+ + +P+ +TFT L
Sbjct: 100 DVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSL 159
Query: 69 IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
++ +C R++DA +F ++L G K NVVTY+ LI K++++ A +++ +M N
Sbjct: 160 LNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGS 219
Query: 129 SPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
PN+ GR +A L M++ I P+ + + L D
Sbjct: 220 RPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALID 266
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
++ AL +F + R ++ +I+TY II G C L ++++A LF L +KPN IT+T
Sbjct: 414 VEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTT 473
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTY 100
+I FC+ G + +A +F KM E G N Y
Sbjct: 474 MISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 77/168 (45%), Gaps = 12/168 (7%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+ AL LF ++ P II + ++ +NR D + LFE++ + + P T
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
I++ C + A+ KM++ G + ++VT++ L++GY ++ A +++++
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 127 NISPNIAGRPT------------EAMQLYDSMLRNGIMPDGLLLSTLA 162
PN+ T A++L++ M NG P+ + + L
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALV 230
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 81/124 (65%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
KE + + KLF + G++P++ITYNT+I GYC ++DEA++L + V LKPN++
Sbjct: 488 KEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTV 547
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T++ LI+ +CK RM+DA ++F +M G +++TY+ ++ G F+++ +A ++Y +
Sbjct: 548 TYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 607
Query: 124 CENN 127
E+
Sbjct: 608 TESG 611
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 78/124 (62%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
+ A +L ++ DRG+ + I +N+II +C R+ E+ +LFE + + +KPN IT+ L
Sbjct: 458 ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTL 517
Query: 69 IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
I+ +C G+MD+A + S M+ G K N VTYS LI+GY K M+ A +++EM + +
Sbjct: 518 INGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGV 577
Query: 129 SPNI 132
SP+I
Sbjct: 578 SPDI 581
Score = 90.5 bits (223), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 12/172 (6%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
KE D A + ++ DRG+ PD++TYN+II C +D+A+++ + + P+
Sbjct: 206 FFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPD 265
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T+ ++ +C G+ +A KM G + +VVTYS L+D K+ A +++
Sbjct: 266 CMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFD 325
Query: 122 EMCENNISPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
M + + P I G E L D M+RNGI PD + S L
Sbjct: 326 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSIL 377
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 1 MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
+L K ++ A+ F Q+ D GL P I YN++I G C+ N+ + A +L ++ +
Sbjct: 415 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL 474
Query: 61 NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
N+I F +ID+ CKEGR+ ++ +F M+ G K NV+TY+ LI+GY + M A +
Sbjct: 475 NTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLL 534
Query: 121 EEMCENNISPNIA------------GRPTEAMQLYDSMLRNGIMPD 154
M + PN R +A+ L+ M +G+ PD
Sbjct: 535 SGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPD 580
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 85/167 (50%), Gaps = 12/167 (7%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K +D A+++ + G+ PD +TYN+I+ GYCS + EA+ +K+ ++P+
Sbjct: 241 LCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPD 300
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T+++L+D CK GR +A +F M ++G K + TY L+ GY + + +
Sbjct: 301 VVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 360
Query: 122 EMCENNISPN------------IAGRPTEAMQLYDSMLRNGIMPDGL 156
M N I P+ G+ +AM ++ M + G+ P+ +
Sbjct: 361 LMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAV 407
Score = 86.7 bits (213), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 71/121 (58%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A K+F +T RGL+P+I TY T++ GY + L E L + + + P+ F+ILI
Sbjct: 320 ARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILIC 379
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
A+ K+G++D A ++FSKM ++G N VTY +I KS ++ A +E+M + +SP
Sbjct: 380 AYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 439
Query: 131 N 131
Sbjct: 440 G 440
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 88/171 (51%), Gaps = 15/171 (8%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ---LKPNSITF 65
DA + ++T+ G P++ +YN ++ G C NR EA++L + + P+ +++
Sbjct: 140 DAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 199
Query: 66 TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
T +I+ F KEG D A + +ML++G +VVTY+ +I K+Q M A +V M +
Sbjct: 200 TTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVK 259
Query: 126 NNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADY 164
N + P+ +G+P EA+ M +G+ PD + S L DY
Sbjct: 260 NGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDY 310
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 79/152 (51%), Gaps = 12/152 (7%)
Query: 22 GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
G+ PD ++ +IC Y ++D+A+ +F K+ L PN++T+ +I CK GR++DA
Sbjct: 366 GIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDA 425
Query: 82 TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI--------- 132
+ F +M+++G + Y+ LI G + A ++ EM + I N
Sbjct: 426 MLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDS 485
Query: 133 ---AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
GR E+ +L++ M+R G+ P+ + +TL
Sbjct: 486 HCKEGRVIESEKLFELMVRIGVKPNVITYNTL 517
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 12/170 (7%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K+ +D A+ +F ++ +GL P+ +TY +I C R+++A+ FE++ L P +I
Sbjct: 383 KQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 442
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
+ LI C + + A + +ML++G N + ++ +ID + K + + ++E M
Sbjct: 443 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELM 502
Query: 124 CENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
+ PN+ AG+ EAM+L M+ G+ P+ + STL
Sbjct: 503 VRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTL 552
Score = 80.5 bits (197), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 88/159 (55%), Gaps = 12/159 (7%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
+D A+KL + GL+P+ +TY+T+I GYC ++R+++A+ LF+++ + P+ IT+ I
Sbjct: 527 MDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNI 586
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
++ + R A ++ ++ E G + + TY+ ++ G K++ A +++ +C +
Sbjct: 587 ILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMD 646
Query: 128 I-----SPNI-------AGRPTEAMQLYDSMLRNGIMPD 154
+ + NI GR EA L+ + NG++P+
Sbjct: 647 LKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN 685
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 81/166 (48%), Gaps = 15/166 (9%)
Query: 11 ALKLFGQLTDR---GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
AL+L + D G PD+++Y T+I G+ D+A + ++ + P+ +T+
Sbjct: 177 ALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNS 236
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
+I A CK MD A + + M++ G + +TY+ ++ GY S K A ++M +
Sbjct: 237 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDG 296
Query: 128 ISPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
+ P++ GR EA +++DSM + G+ P+ TL
Sbjct: 297 VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTL 342
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 75/176 (42%), Gaps = 12/176 (6%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K ++ AL LF ++ G+ PDIITYN I+ G R A +L+ ++T +
Sbjct: 558 KISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELS 617
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+ I++ CK DDA MF + K T++ +ID K A D++
Sbjct: 618 TYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAF 677
Query: 124 CENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQ 167
N + PN G E QL+ SM NG D +L+ + LQ
Sbjct: 678 SSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQ 733
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 84/199 (42%), Gaps = 54/199 (27%)
Query: 10 AALKLFGQLTDRG---LEPDIITYNTIICGYCSLNRLD----------------EAVQ-- 48
AA+ + ++ G + PD+ TY +I C RLD +A+
Sbjct: 67 AAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFT 126
Query: 49 ------------------LFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLE 90
+ ++T + PN ++ IL+ C E R +A + M +
Sbjct: 127 PLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMAD 186
Query: 91 K---GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI------------AGR 135
G +VV+Y+ +I+G+FK + A+ Y EM + I P++ A
Sbjct: 187 DRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQA 246
Query: 136 PTEAMQLYDSMLRNGIMPD 154
+AM++ ++M++NG+MPD
Sbjct: 247 MDKAMEVLNTMVKNGVMPD 265
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 91/163 (55%), Gaps = 12/163 (7%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
KE +++ AL L ++T G+EP+IIT++T+I GYC++ + A+ L+ ++T + P+ +
Sbjct: 421 KEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVV 480
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE- 122
T+T LIDA KE M +A ++S MLE G N T++CL+DG++K + A D Y+E
Sbjct: 481 TYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQEN 540
Query: 123 ----MCENNISPNIA-------GRPTEAMQLYDSMLRNGIMPD 154
C N++ G A + + M GI PD
Sbjct: 541 NQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPD 583
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 90/182 (49%), Gaps = 12/182 (6%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K L A LF + G++P++ YN +I G+C + EAV L ++ + L P+
Sbjct: 316 KARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVF 375
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+TILI+ C E ++ +A +F KM + + TY+ LI GY K NM+ A D+ EM
Sbjct: 376 TYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEM 435
Query: 124 CENNISPNIAGRPT------------EAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGS 171
+ + PNI T AM LY M GI+PD + + L D + + +
Sbjct: 436 TASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANM 495
Query: 172 QE 173
+E
Sbjct: 496 KE 497
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 88/165 (53%), Gaps = 12/165 (7%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A+ L ++ L PD+ TY +I G C +++ EA +LF+K+ ++ P+S T+ LI
Sbjct: 358 AVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIH 417
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
+CKE M+ A + S+M G + N++T+S LIDGY +++K+A +Y EM I P
Sbjct: 418 GYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVP 477
Query: 131 NIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
++ EA++LY ML GI P+ + L D
Sbjct: 478 DVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVD 522
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 92/185 (49%), Gaps = 17/185 (9%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L ++ ++ A K+F + G+ P++ TY+ +I GYC + +A L++++ +L PN
Sbjct: 244 LCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPN 303
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+ F L+D FCK + A +F M++ G N+ Y+CLI G+ KS NM A +
Sbjct: 304 VVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLS 363
Query: 122 EMCENNISPN------------IAGRPTEAMQLYDSMLRNGIMPDGLLLSTL-----ADY 164
EM N+SP+ I + EA +L+ M I P ++L +Y
Sbjct: 364 EMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEY 423
Query: 165 NLQSS 169
N++ +
Sbjct: 424 NMEQA 428
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 91/175 (52%), Gaps = 13/175 (7%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
+ AA+ L+ ++T +G+ PD++TY +I + + EA++L+ + + PN TF
Sbjct: 460 IKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFAC 519
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
L+D F KEGR+ A + + ++ N V ++CLI+G ++ + A + +M
Sbjct: 520 LVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCG 579
Query: 128 ISPNIAG------------RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 170
I+P+I R T+ M L M++ GI+P+ L+ LA + Q++G
Sbjct: 580 ITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARF-YQANG 633
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 81/163 (49%), Gaps = 12/163 (7%)
Query: 13 KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
KL ++T G++P++ Y I C N+++EA ++FE + + PN T++ +ID +
Sbjct: 220 KLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGY 279
Query: 73 CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
CK G + A ++ ++L NVV + L+DG+ K++ + +A ++ M + + PN+
Sbjct: 280 CKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNL 339
Query: 133 ------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
+G EA+ L M + PD + L +
Sbjct: 340 YVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILIN 382
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 60/151 (39%), Gaps = 12/151 (7%)
Query: 25 PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
PD +I+ G R D ++ + L P+ + +L K+G +
Sbjct: 162 PDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKL 221
Query: 85 FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI------------ 132
+M G K NV Y+ I + M+ A ++E M ++ + PN+
Sbjct: 222 LDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCK 281
Query: 133 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
G +A LY +L ++P+ ++ TL D
Sbjct: 282 TGNVRQAYGLYKEILVAELLPNVVVFGTLVD 312
Score = 38.5 bits (88), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/164 (19%), Positives = 69/164 (42%), Gaps = 16/164 (9%)
Query: 13 KLFGQLTD-RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDA 71
+LF L D + + I ++ +I + + +EA+ + ++ C P+S +++
Sbjct: 117 RLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREMKC---SPDSKACLSILNG 173
Query: 72 FCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN 131
+ R D + + M+ +G +V Y L FK + +EM I PN
Sbjct: 174 LVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPN 233
Query: 132 IA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
+ + EA ++++ M ++G++P+ S + D
Sbjct: 234 VYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMID 277
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 96/174 (55%), Gaps = 13/174 (7%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L +C + A +L GQ+ ++GL P++ITYN +I GYC +++AV + E + +L PN
Sbjct: 368 LCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPN 427
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+ T+ LI +CK + A + +KMLE+ +VVTY+ LIDG +S N SA+ +
Sbjct: 428 TRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLS 486
Query: 122 EMCENNISPN------------IAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
M + + P+ + R EA L+DS+ + G+ P+ ++ + L D
Sbjct: 487 LMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALID 540
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 91/173 (52%), Gaps = 11/173 (6%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+D A+ LF ++ D P + TY +I C R EA+ L +++ +KPN T+T
Sbjct: 303 RIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
+LID+ C + + + A + +MLEKG NV+TY+ LI+GY K ++ A DV E M
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR 422
Query: 127 NISPN-------IAG----RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQS 168
+SPN I G +AM + + ML ++PD + ++L D +S
Sbjct: 423 KLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRS 475
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 83/167 (49%), Gaps = 12/167 (7%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+ D+A +L + DRGL PD TY ++I C R++EA LF+ L + PN + +T
Sbjct: 477 NFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYT 536
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
LID +CK G++D+A +M KML K N +T++ LI G +K A + E+M +
Sbjct: 537 ALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKI 596
Query: 127 NISPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
+ P ++ G A + ML +G PD +T
Sbjct: 597 GLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTF 643
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 84/172 (48%), Gaps = 12/172 (6%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K ++ A LF L +G+ P+++ Y +I GYC ++DEA + EK+ PN
Sbjct: 507 LCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPN 566
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
S+TF LI C +G++ +AT++ KM++ G + V T + LI K + A+ ++
Sbjct: 567 SLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQ 626
Query: 122 EMCENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
+M + P+ GR +A + M NG+ PD S+L
Sbjct: 627 QMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSL 678
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 83/159 (52%), Gaps = 12/159 (7%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
++ A+ + ++ +R + PD++TYN++I G C D A +L + L P+ T+T
Sbjct: 442 NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYT 501
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
+ID+ CK R+++A +F + +KG NVV Y+ LIDGY K+ + A + E+M
Sbjct: 502 SMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSK 561
Query: 127 NISPN------------IAGRPTEAMQLYDSMLRNGIMP 153
N PN G+ EA L + M++ G+ P
Sbjct: 562 NCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQP 600
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+++ A + ++ + GL+PD TY ++I GYC LD A ++F ++ + N + +T
Sbjct: 233 NVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYT 292
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
LI C R+D+A +F KM + V TY+ LI S+ A ++ +EM E
Sbjct: 293 HLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEET 352
Query: 127 NISPNIAG------------RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
I PNI + +A +L ML G+MP+ + + L +
Sbjct: 353 GIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALIN 401
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 85/168 (50%), Gaps = 12/168 (7%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
+D +++ ++ + + P+I TYN ++ GYC L ++EA Q K+ L P+ T+T
Sbjct: 199 VDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTS 258
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
LI +C+ +D A +F++M KG + N V Y+ LI G ++ + A D++ +M ++
Sbjct: 259 LIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDE 318
Query: 128 ISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
P + + R +EA+ L M GI P+ + L D
Sbjct: 319 CFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLID 366
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 60/124 (48%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
L A L ++ GL+P + T +I D A F+++ KP++ T+T
Sbjct: 583 LKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTT 642
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
I +C+EGR+ DA M +KM E G ++ TYS LI GY AFDV + M +
Sbjct: 643 FIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG 702
Query: 128 ISPN 131
P+
Sbjct: 703 CEPS 706
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 12/136 (8%)
Query: 30 YNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKML 89
YNT++ +DE Q++ ++ ++ PN T+ +++ +CK G +++A SK++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 90 EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM----CENNISPN--------IAGRPT 137
E G + TY+ LI GY + +++ SAF V+ EM C N +A R
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 138 EAMQLYDSMLRNGIMP 153
EAM L+ M + P
Sbjct: 306 EAMDLFVKMKDDECFP 321
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 82/191 (42%), Gaps = 31/191 (16%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L+K+ D A F Q+ G +PD TY T I YC RL +A + K+ + P+
Sbjct: 612 LLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPD 671
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMK------- 114
T++ LI + G+ + A + +M + G + + T+ LI + + K
Sbjct: 672 LFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPE 731
Query: 115 -----------SAFDVYEEMCENNISPNI------------AGRPTEAMQLYDSMLRN-G 150
+ ++ E+M E++++PN G A +++D M RN G
Sbjct: 732 LCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEG 791
Query: 151 IMPDGLLLSTL 161
I P L+ + L
Sbjct: 792 ISPSELVFNAL 802
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 62/121 (51%), Gaps = 1/121 (0%)
Query: 7 HLDAALKLFGQLT-DRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF 65
+L A K+F + + G+ P + +N ++ C L + +EA ++ + + CV P +
Sbjct: 775 NLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESC 834
Query: 66 TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
+LI K+G + T +F +L+ G + + + +IDG K +++ ++++ M +
Sbjct: 835 KVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEK 894
Query: 126 N 126
N
Sbjct: 895 N 895
Score = 37.0 bits (84), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 45/98 (45%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
+ A K+ + G P + + +ICG + +F+ L + + + I+
Sbjct: 813 NEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKII 872
Query: 69 IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDG 106
ID K+G ++ +F+ M + G K + TYS LI+G
Sbjct: 873 IDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 94/172 (54%), Gaps = 12/172 (6%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L +E L+ A K+ Q+ G+ P++ITYNT+I G+C + +L +A+ L L L P+
Sbjct: 313 LCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPS 372
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T+ IL+ FC++G A M +M E+G K + VTY+ LID + +S NM+ A +
Sbjct: 373 LVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRL 432
Query: 122 EMCENNISPN------------IAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
M E + P+ I G+ EA +L+ SM+ P+ ++ +T+
Sbjct: 433 SMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTM 484
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 92/165 (55%), Gaps = 12/165 (7%)
Query: 10 AALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
A K+ ++ +RG++P +TY +I + + +++A+QL + + L P+ T+++LI
Sbjct: 391 GAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLI 450
Query: 70 DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
FC +G+M++A+ +F M+EK + N V Y+ +I GY K + A + +EM E ++
Sbjct: 451 HGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELA 510
Query: 130 PNIAG------------RPTEAMQLYDSMLRNGIMPDGLLLSTLA 162
PN+A + EA +L + M+ +GI P +LS ++
Sbjct: 511 PNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLIS 555
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 90/179 (50%), Gaps = 16/179 (8%)
Query: 1 MLIKEC----HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV 56
+LIK C ++ + L +LT+ G P+++ Y T+I G C +++A LF ++ +
Sbjct: 168 ILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKL 227
Query: 57 QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
L N T+T+LI+ K G M+ KM E G N+ TY+C+++ K K A
Sbjct: 228 GLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDA 287
Query: 117 FDVYEEMCENNISPNIAGRPT------------EAMQLYDSMLRNGIMPDGLLLSTLAD 163
F V++EM E +S NI T EA ++ D M +GI P+ + +TL D
Sbjct: 288 FQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLID 346
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 87/165 (52%), Gaps = 12/165 (7%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K+ A ++F ++ +RG+ +I+TYNT+I G C +L+EA ++ +++ + PN
Sbjct: 278 LCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPN 337
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
IT+ LID FC G++ A + + +G ++VTY+ L+ G+ + + A + +
Sbjct: 338 LITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVK 397
Query: 122 EMCENNISPNI------------AGRPTEAMQLYDSMLRNGIMPD 154
EM E I P+ + +A+QL SM G++PD
Sbjct: 398 EMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPD 442
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 12/148 (8%)
Query: 26 DIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMF 85
D+ ++ +I G C ++++ L +LT PN + +T LID CK+G ++ A +F
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 86 SKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIA------------ 133
+M + G AN TY+ LI+G FK+ K F++YE+M E+ + PN+
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281
Query: 134 GRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
GR +A Q++D M G+ + + +TL
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTL 309
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 71/127 (55%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+++ A++L + + GL PD+ TY+ +I G+C +++EA +LF+ + +PN + +
Sbjct: 423 NMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYN 482
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
+I +CKEG A + +M EK NV +Y +I+ K + K A + E+M ++
Sbjct: 483 TMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDS 542
Query: 127 NISPNIA 133
I P+ +
Sbjct: 543 GIDPSTS 549
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
+++ ++ + G+ P++ TYN ++ C R +A Q+F+++ + N +T+ LI
Sbjct: 252 GFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIG 311
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
C+E ++++A + +M G N++TY+ LIDG+ + A + ++ +SP
Sbjct: 312 GLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSP 371
Query: 131 NIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
++ G + A ++ M GI P + + L D
Sbjct: 372 SLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILID 416
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 93/165 (56%), Gaps = 12/165 (7%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
+KE L A KL+ ++ R ++PDI TY+++I G+C +RLDEA +FE + PN
Sbjct: 335 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 394
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T+ LI FCK R+++ +F +M ++G N VTY+ LI G F++ + A +++
Sbjct: 395 VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFK 454
Query: 122 EMCENNISPNIA------------GRPTEAMQLYDSMLRNGIMPD 154
+M + + P+I G+ +A+ +++ + ++ + PD
Sbjct: 455 KMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPD 499
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 88/172 (51%), Gaps = 12/172 (6%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K +D AL L ++ +E D++ Y TII C+ +++A+ LF ++ ++PN
Sbjct: 230 LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 289
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T+ LI C GR DA+ + S M+E+ NVVT+S LID + K + A +Y+
Sbjct: 290 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349
Query: 122 EMCENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
EM + +I P+I R EA +++ M+ P+ + +TL
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 401
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 85/163 (52%), Gaps = 12/163 (7%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A+ L ++ RG +PD+ TY T++ G C +D A+ L +K+ +++ + + +T +ID
Sbjct: 204 AVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIID 263
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
A C ++DA +F++M KG + NVVTY+ LI A + +M E I+P
Sbjct: 264 ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 323
Query: 131 NIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
N+ G+ EA +LYD M++ I PD S+L
Sbjct: 324 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 47/204 (23%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+++ AL LF ++ ++G+ P+++TYN++I C+ R +A +L + ++ PN +TF+
Sbjct: 270 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 329
Query: 67 ILIDAFCKEG-----------------------------------RMDDATMMFSKMLEK 91
LIDAF KEG R+D+A MF M+ K
Sbjct: 330 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 389
Query: 92 GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI------------AGRPTEA 139
NVVTY+ LI G+ K++ ++ +++ EM + + N AG A
Sbjct: 390 DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 449
Query: 140 MQLYDSMLRNGIMPDGLLLSTLAD 163
+++ M+ +G+ PD + S L D
Sbjct: 450 QKIFKKMVSDGVPPDIITYSILLD 473
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 81/142 (57%), Gaps = 4/142 (2%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
D A K+F ++ G+ PDIITY+ ++ G C +L++A+ +FE L +++P+ T+ I+
Sbjct: 447 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 506
Query: 69 IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
I+ CK G+++D +F + KG K NV+ Y+ +I G+ + + A ++ EM E+
Sbjct: 507 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 566
Query: 129 SPNIAGRPTEAMQLYDSMLRNG 150
PN T L + LR+G
Sbjct: 567 LPNSGTYNT----LIRARLRDG 584
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 47/207 (22%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
+ L AL + G++ G EPDI+T ++++ GYC R+ EAV L +++ ++ +PN++
Sbjct: 127 RRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTV 186
Query: 64 TFTILI-----------------------------------DAFCKEGRMDDATMMFSKM 88
TF LI + CK G +D A + KM
Sbjct: 187 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 246
Query: 89 LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIA------------GRP 136
+ +A+VV Y+ +ID +N+ A +++ EM I PN+ GR
Sbjct: 247 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 306
Query: 137 TEAMQLYDSMLRNGIMPDGLLLSTLAD 163
++A +L M+ I P+ + S L D
Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALID 333
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 92/176 (52%), Gaps = 12/176 (6%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K ++ ++LF +++ RGL + +TYNT+I G D A ++F+K+ + P+ I
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T++IL+D CK G+++ A ++F + + + ++ TY+ +I+G K+ ++ +D++ +
Sbjct: 467 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 526
Query: 124 CENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQ 167
+ PN+ G EA L+ M +G +P+ +TL L+
Sbjct: 527 SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLR 582
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 67/122 (54%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K L+ AL +F L +EPDI TYN +I G C ++++ LF L+ +KPN
Sbjct: 475 LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 534
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
I +T +I FC++G ++A +F +M E G N TY+ LI + + ++ ++ +
Sbjct: 535 VIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIK 594
Query: 122 EM 123
EM
Sbjct: 595 EM 596
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 84/171 (49%), Gaps = 12/171 (7%)
Query: 5 ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
+ LD A+ LFG++ P I+ +N ++ +N+ D + L E++ +++ + +
Sbjct: 58 DLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYS 117
Query: 65 FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
+ ILI+ FC+ ++ A + KM++ G + ++VT S L++GY + + A + ++M
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177
Query: 125 ENNISPN------------IAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
PN + + +EA+ L D M+ G PD T+ +
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVN 228
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K ++ LF L+ +G++P++I Y T+I G+C +EA LF ++ PNS
Sbjct: 512 KAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSG 571
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLID 105
T+ LI A ++G + + +M G + T S +I+
Sbjct: 572 TYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 613
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 82/132 (62%)
Query: 1 MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
+ +KE L A +L+ ++ RG+ P+IITYNT++ GYC NRL EA + + + + P
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366
Query: 61 NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
+ +TFT LI +C R+DD +F + ++G AN VTYS L+ G+ +S +K A +++
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 121 EEMCENNISPNI 132
+EM + + P++
Sbjct: 427 QEMVSHGVLPDV 438
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 95/173 (54%), Gaps = 12/173 (6%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
+DAA+ LF ++ +G++ ++TYN+++ G C + ++ L + + ++ PN ITF +
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
L+D F KEG++ +A ++ +M+ +G N++TY+ L+DGY + A ++ + M N
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363
Query: 128 ISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQS 168
SP+I R + M+++ ++ + G++ + + S L QS
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 416
Score = 93.2 bits (230), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 97/186 (52%), Gaps = 13/186 (6%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L E + A+ L ++ + G +PD++TYN+I+ G C A+ L K+ +K +
Sbjct: 168 LFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKAD 227
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
T++ +ID+ C++G +D A +F +M KG K++VVTY+ L+ G K+ + +
Sbjct: 228 VFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLK 287
Query: 122 EMCENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD-YNLQS 168
+M I PN+ G+ EA +LY M+ GI P+ + +TL D Y +Q+
Sbjct: 288 DMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQN 347
Query: 169 SGSQEH 174
S+ +
Sbjct: 348 RLSEAN 353
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 87/163 (53%), Gaps = 12/163 (7%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
AL L ++ +R ++ D+ TY+TII C +D A+ LF+++ +K + +T+ L+
Sbjct: 212 ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 271
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
CK G+ +D ++ M+ + NV+T++ L+D + K ++ A ++Y+EM ISP
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Query: 131 NI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
NI R +EA + D M+RN PD + ++L
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSL 374
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 67/117 (57%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
L+ AL++F L ++ I+ Y TII G C ++++A LF L C +KPN +T+T
Sbjct: 453 KLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYT 512
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
++I CK+G + +A ++ KM E G N TY+ LI + + ++ ++ + EEM
Sbjct: 513 VMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 569
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 72/121 (59%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A +LF ++ G+ PD++TY ++ G C +L++A+++FE L ++ + +T +I+
Sbjct: 422 AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIE 481
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
CK G+++DA +F + KG K NV+TY+ +I G K ++ A + +M E+ +P
Sbjct: 482 GMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAP 541
Query: 131 N 131
N
Sbjct: 542 N 542
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 87/173 (50%), Gaps = 12/173 (6%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+D +K+F ++ RGL + +TY+ ++ G+C ++ A +LF+++ + P+ +T+
Sbjct: 383 RVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYG 442
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
IL+D C G+++ A +F + + +V Y+ +I+G K ++ A++++ +
Sbjct: 443 ILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCK 502
Query: 127 NISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQ 167
+ PN+ G +EA L M +G P+ +TL +L+
Sbjct: 503 GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 555
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 73/144 (50%), Gaps = 4/144 (2%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+ L QL G+ +I T N +I +C + A + K+ + +P++ TF
Sbjct: 103 QFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFN 162
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
LI EG++ +A ++ +M+E G + +VVTY+ +++G +S + A D+ +M E
Sbjct: 163 TLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER 222
Query: 127 NISPNIAGRPTEAMQLYDSMLRNG 150
N+ ++ T + DS+ R+G
Sbjct: 223 NVKADVFTYST----IIDSLCRDG 242
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 54/116 (46%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K ++ A LF L +G++P+++TY +I G C L EA L K+ PN
Sbjct: 485 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDC 544
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
T+ LI A ++G + + + +M G A+ + +ID + KS D+
Sbjct: 545 TYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGELDKSFLDM 600
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 95/161 (59%), Gaps = 12/161 (7%)
Query: 1 MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
+ +KE L A +L+ ++ RG+ PD ITYN++I G+C N L EA Q+F+ + +P
Sbjct: 324 VFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEP 383
Query: 61 NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
+ +T++ILI+++CK R+DD +F ++ KG N +TY+ L+ G+ +S + +A +++
Sbjct: 384 DIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELF 443
Query: 121 EEMCENNISPNIA------------GRPTEAMQLYDSMLRN 149
+EM + P++ G +A+++++ M ++
Sbjct: 444 QEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKS 484
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 97/179 (54%), Gaps = 18/179 (10%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
KE L A ++F + +G EPDI+TY+ +I YC R+D+ ++LF +++ L PN+I
Sbjct: 362 KENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTI 421
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+ L+ FC+ G+++ A +F +M+ +G +VVTY L+DG + + A +++E+M
Sbjct: 422 TYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM 481
Query: 124 CENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 170
++ ++ I A + +A L+ S+ G+ PD + YN+ G
Sbjct: 482 QKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPD------VVTYNVMIGG 534
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 96/173 (55%), Gaps = 12/173 (6%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K+ D AL LF ++ +G++ D++TY+++I G C+ + D+ ++ ++ + P+
Sbjct: 255 LCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 314
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+TF+ LID F KEG++ +A ++++M+ +G + +TY+ LIDG+ K + A +++
Sbjct: 315 VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFD 374
Query: 122 EMCENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLA 162
M P+I A R + M+L+ + G++P+ + +TL
Sbjct: 375 LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 12/169 (7%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+ AL L ++ + G +PD +TY ++ C A+ LF K+ +K + + ++
Sbjct: 190 RVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYS 249
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
I+ID+ CK+G DDA +F++M KG KA+VVTYS LI G + EM
Sbjct: 250 IVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR 309
Query: 127 NISPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
NI P++ G+ EA +LY+ M+ GI PD + ++L D
Sbjct: 310 NIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLID 358
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 89/163 (54%), Gaps = 12/163 (7%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A + G+ G EPD IT++T++ G+C R+ EAV L +++ ++ +P+ +T + LI+
Sbjct: 124 AFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLIN 183
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
C +GR+ +A ++ +M+E G + + VTY +++ KS N A D++ +M E NI
Sbjct: 184 GLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKA 243
Query: 131 NIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
++ G +A+ L++ M GI D + S+L
Sbjct: 244 SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSL 286
Score = 83.2 bits (204), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 82/163 (50%), Gaps = 12/163 (7%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
AL LF ++ +R ++ ++ Y+ +I C D+A+ LF ++ +K + +T++ LI
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
C +G+ DD M +M+ + +VVT+S LID + K + A ++Y EM I+P
Sbjct: 289 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP 348
Query: 131 NIAGRPT------------EAMQLYDSMLRNGIMPDGLLLSTL 161
+ + EA Q++D M+ G PD + S L
Sbjct: 349 DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSIL 391
Score = 80.1 bits (196), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 73/125 (58%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
L+AA +LF ++ RG+ P ++TY ++ G C L++A+++FEK+ ++ +
Sbjct: 435 KLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYN 494
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
I+I C ++DDA +F + +KG K +VVTY+ +I G K ++ A ++ +M E+
Sbjct: 495 IIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKED 554
Query: 127 NISPN 131
+P+
Sbjct: 555 GCTPD 559
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 67/117 (57%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
L+ AL++F ++ + I YN II G C+ +++D+A LF L+ +KP+ +T+
Sbjct: 470 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYN 529
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
++I CK+G + +A M+F KM E G + TY+ LI + + S+ ++ EEM
Sbjct: 530 VMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 586
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 66/133 (49%), Gaps = 23/133 (17%)
Query: 22 GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDA 81
G+E D+ T +I YC +L A + + + +P++ITF+ L++ FC EGR+ +A
Sbjct: 100 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 159
Query: 82 TMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIAGRPTEAMQ 141
+ +M+E + ++VT S LI+G +C + GR +EA+
Sbjct: 160 VALVDRMVEMKQRPDLVTVSTLING----------------LC-------LKGRVSEALV 196
Query: 142 LYDSMLRNGIMPD 154
L D M+ G PD
Sbjct: 197 LIDRMVEYGFQPD 209
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+D A LF L+D+G++PD++TYN +I G C L EA LF K+ P+ T+
Sbjct: 505 KVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYN 564
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLID 105
ILI A + + + +M G A+ T +ID
Sbjct: 565 ILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVID 603
Score = 35.0 bits (79), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K+ L A LF ++ + G PD TYN +I + + L +V+L E++ +
Sbjct: 535 LCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSAD 594
Query: 62 SITFTILIDAFCKEGRMDDA 81
S T ++ID + R+D +
Sbjct: 595 SSTIKMVIDML-SDRRLDKS 613
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 94/169 (55%), Gaps = 10/169 (5%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
KE L A KL ++ R ++PD ITYN +I G+C NRLDEA Q+F+ + PN
Sbjct: 338 FFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPN 397
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
T+ LI+ FCK R++D +F +M ++G N VTY+ +I G+F++ + SA V++
Sbjct: 398 IQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFK 457
Query: 122 EMCENNISPNIAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYN-LQSS 169
+M N + PT+ M S+L +G+ G L + L + LQ S
Sbjct: 458 QMVSNRV-------PTDIMTY--SILLHGLCSYGKLDTALVIFKYLQKS 497
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 86/165 (52%), Gaps = 12/165 (7%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K +D AL L ++ ++ +++ +NTII C ++ AV LF ++ ++PN
Sbjct: 233 LCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN 292
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T+ LI+ C GR DA+ + S MLEK NVVT++ LID +FK + A ++E
Sbjct: 293 VVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHE 352
Query: 122 EMCENNISPN------------IAGRPTEAMQLYDSMLRNGIMPD 154
EM + +I P+ + R EA Q++ M+ +P+
Sbjct: 353 EMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPN 397
Score = 92.8 bits (229), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 88/176 (50%), Gaps = 18/176 (10%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A+ L Q+ RG +PD++TY T++ G C +D A+ L K+ ++K N + F +ID
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIID 266
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
+ CK ++ A +F++M KG + NVVTY+ LI+ A + M E I+P
Sbjct: 267 SLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINP 326
Query: 131 NIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEH 174
N+ G+ EA +L++ M++ I PD + YNL +G H
Sbjct: 327 NVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTI------TYNLLINGFCMH 376
Score = 86.3 bits (212), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 89/173 (51%), Gaps = 15/173 (8%)
Query: 6 CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
CH + A+ L Q+ + G +PD T+ T+I G N+ EAV L +++ +P+
Sbjct: 164 CHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDL 223
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
+T+ +++ CK G +D A + +KM KANVV ++ +ID K ++++ A D++ E
Sbjct: 224 VTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTE 283
Query: 123 MCENNISPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
M I PN+ GR ++A +L +ML I P+ + + L D
Sbjct: 284 METKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALID 336
Score = 79.7 bits (195), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 84/163 (51%), Gaps = 12/163 (7%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A +L + ++ + P+++T+N +I + +L EA +L E++ + P++IT+ +LI+
Sbjct: 312 ASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLIN 371
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
FC R+D+A MF M+ K N+ TY+ LI+G+ K + ++ +++ EM + +
Sbjct: 372 GFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVG 431
Query: 131 NI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
N AG A ++ M+ N + D + S L
Sbjct: 432 NTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSIL 474
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 88/167 (52%), Gaps = 15/167 (8%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
LD A ++F + + P+I TYNT+I G+C R+++ V+LF +++ L N++T+T
Sbjct: 378 RLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYT 437
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
+I F + G D A M+F +M+ +++TYS L+ G + +A +++ + ++
Sbjct: 438 TIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKS 497
Query: 127 NISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
+ NI AG+ EA L+ S+ I PD + +T+
Sbjct: 498 EMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTM 541
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 86/168 (51%), Gaps = 12/168 (7%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
+D A+ LFG + P I+ +N ++ +N+ + + L E++ + + + T++I
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
I+ FC+ ++ A + +KM++ G + ++VT S L++GY S+ + A + ++M E
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 128 ISPN------------IAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
P+ + + +EA+ L D M++ G PD + T+ +
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 69/123 (56%), Gaps = 3/123 (2%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
D+A +F Q+ + DI+TY+ ++ G CS +LD A+ +F+ L +++ N + +
Sbjct: 450 DSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTM 509
Query: 69 IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
I+ CK G++ +A +F + K +VVTY+ +I G + ++ A D++ +M E+
Sbjct: 510 IEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGT 566
Query: 129 SPN 131
PN
Sbjct: 567 LPN 569
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 73/150 (48%), Gaps = 8/150 (5%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
LD AL +F L +E +I YNT+I G C ++ EA LF L+ +KP+ +T+
Sbjct: 484 LDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---IKPDVVTYNT 540
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
+I C + + +A +F KM E G N TY+ LI + + ++ ++ +EM
Sbjct: 541 MISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEM---- 596
Query: 128 ISPNIAGRPTEAMQLYDSMLRNGIMPDGLL 157
S G + + L +ML +G + L
Sbjct: 597 RSSGFVGDAS-TISLVTNMLHDGRLDKSFL 625
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 94/174 (54%), Gaps = 12/174 (6%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
+KE A KL + R ++PDI TYN++I G+C +RLD+A Q+FE + P+
Sbjct: 265 FVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPD 324
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
T+ LI FCK R++D T +F +M +G + VTY+ LI G F + +A V++
Sbjct: 325 LDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 384
Query: 122 EMCENNISPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
+M + + P+I G+ +A++++D M ++ I D + +T+ +
Sbjct: 385 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 438
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 90/172 (52%), Gaps = 12/172 (6%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K H+D AL LF ++ +G+ P+++TY+++I CS R +A QL + ++ PN
Sbjct: 195 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 254
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+TF LIDAF KEG+ +A + M+++ ++ TY+ LI+G+ + A ++E
Sbjct: 255 LVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE 314
Query: 122 EMCENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
M + P++ + R + +L+ M G++ D + +TL
Sbjct: 315 FMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 366
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 85/165 (51%), Gaps = 12/165 (7%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K +D A L ++ +E D++ +NTII C +D+A+ LF+++ ++PN
Sbjct: 160 LCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 219
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T++ LI C GR DA+ + S M+EK N+VT++ LID + K A +++
Sbjct: 220 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHD 279
Query: 122 EMCENNISPNI------------AGRPTEAMQLYDSMLRNGIMPD 154
+M + +I P+I R +A Q+++ M+ PD
Sbjct: 280 DMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPD 324
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 12/156 (7%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A+ L ++ RG +P+++TY ++ G C +D A L K+ +++ + + F +ID
Sbjct: 134 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIID 193
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
+ CK +DDA +F +M KG + NVVTYS LI A + +M E I+P
Sbjct: 194 SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP 253
Query: 131 NIA------------GRPTEAMQLYDSMLRNGIMPD 154
N+ G+ EA +L+D M++ I PD
Sbjct: 254 NLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPD 289
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 93/185 (50%), Gaps = 16/185 (8%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
+ + AL L G++ G EP I+T ++++ GYC R+ +AV L +++ + +P++I
Sbjct: 57 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 116
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
TFT LI + +A + +M+++G + N+VTY +++G K ++ AF++ +M
Sbjct: 117 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 176
Query: 124 CENNISPNIAGRPT------------EAMQLYDSMLRNGIMPDGL----LLSTLADYNLQ 167
I ++ T +A+ L+ M GI P+ + L+S L Y
Sbjct: 177 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 236
Query: 168 SSGSQ 172
S SQ
Sbjct: 237 SDASQ 241
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 83/142 (58%), Gaps = 4/142 (2%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
D A K+F Q+ G+ PDI+TY+ ++ G C+ +L++A+++F+ + ++K + +T +
Sbjct: 377 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 436
Query: 69 IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
I+ CK G++DD +F + KG K NVVTY+ +I G + ++ A+ + ++M E+
Sbjct: 437 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 496
Query: 129 SPNIAGRPTEAMQLYDSMLRNG 150
P+ T L + LR+G
Sbjct: 497 LPDSGTYNT----LIRAHLRDG 514
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 86/176 (48%), Gaps = 12/176 (6%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K ++ +LF +++ RGL D +TY T+I G D A ++F+++ + P+ +
Sbjct: 337 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 396
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T++IL+D C G+++ A +F M + K ++ Y+ +I+G K+ + +D++ +
Sbjct: 397 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 456
Query: 124 CENNISPNIAGRPT------------EAMQLYDSMLRNGIMPDGLLLSTLADYNLQ 167
+ PN+ T EA L M +G +PD +TL +L+
Sbjct: 457 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLR 512
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 70/142 (49%), Gaps = 12/142 (8%)
Query: 25 PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
P I +N ++ + + D + L EK+ + + N T+ ILI+ FC+ ++ A +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 85 FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN------------I 132
KM++ G + ++VT S L++GY + + A + ++M E P+ +
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 133 AGRPTEAMQLYDSMLRNGIMPD 154
+ +EA+ L D M++ G P+
Sbjct: 128 HNKASEAVALVDRMVQRGCQPN 149
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 61/116 (52%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
L+ AL++F + ++ DI Y T+I G C ++D+ LF L+ +KPN +T+
Sbjct: 411 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 470
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
+I C + + +A + KM E GP + TY+ LI + + + ++ ++ EM
Sbjct: 471 MISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 64/126 (50%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
D + L ++ G+ ++ TYN +I +C +++ A+ L K+ + +P+ +T +
Sbjct: 26 FDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSS 85
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
L++ +C R+ DA + +M+E G + + +T++ LI G F A + + M +
Sbjct: 86 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 145
Query: 128 ISPNIA 133
PN+
Sbjct: 146 CQPNLV 151
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K +D LF L+ +G++P+++TYNT+I G CS L EA L +K+ P+S
Sbjct: 442 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSG 501
Query: 64 TFTILIDAFCKEG 76
T+ LI A ++G
Sbjct: 502 TYNTLIRAHLRDG 514
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 100 bits (248), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 86/172 (50%), Gaps = 12/172 (6%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K+ L KL + +G P+ +TYNT+I G C +LD+AV L E++ + PN
Sbjct: 267 LCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPN 326
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T+ LI+ K+ R DA + S M E+G N YS LI G FK + A ++
Sbjct: 327 DVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWR 386
Query: 122 EMCENNISPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
+M E PNI G+P EA ++ + M+ +G +P+ S+L
Sbjct: 387 KMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSL 438
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 89/172 (51%), Gaps = 12/172 (6%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L+K+ A++L + +RG + Y+ +I G + +EA+ L+ K+ KPN
Sbjct: 337 LVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPN 396
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+ +++L+D C+EG+ ++A + ++M+ G N TYS L+ G+FK+ + A V++
Sbjct: 397 IVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWK 456
Query: 122 EMCENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
EM + S N GR EAM ++ ML GI PD + S++
Sbjct: 457 EMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSI 508
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 83/178 (46%), Gaps = 12/178 (6%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
+D A+++F + +R PD TY T++ G C R+DEAV L +++ P+ + + +
Sbjct: 203 VDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNV 262
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
LID CK+G + T + M KG N VTY+ LI G + A + E M +
Sbjct: 263 LIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSK 322
Query: 128 ISPN-------IAG-----RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 173
PN I G R T+A++L SM G + + S L + ++E
Sbjct: 323 CIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEE 380
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 73/174 (41%), Gaps = 12/174 (6%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L KE +D A+ L ++ G P + YN +I G C L +L + + PN
Sbjct: 232 LCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPN 291
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T+ LI C +G++D A + +M+ N VTY LI+G K + A +
Sbjct: 292 EVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLS 351
Query: 122 EMCENNISPN------------IAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
M E N G+ EAM L+ M G P+ ++ S L D
Sbjct: 352 SMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVD 405
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 50/220 (22%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCS----------LNRL-------- 43
L KE + A+ L+ ++ ++G +P+I+ Y+ ++ G C LNR+
Sbjct: 372 LFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPN 431
Query: 44 -----------------DEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFS 86
+EAVQ+++++ N +++LID C GR+ +A M++S
Sbjct: 432 AYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWS 491
Query: 87 KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC---ENNISPNIAGRP------- 136
KML G K + V YS +I G +M +A +Y EM E P++
Sbjct: 492 KMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLC 551
Query: 137 -----TEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGS 171
+ A+ L +SML G PD + +T + + S S
Sbjct: 552 MQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNS 591
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 75/153 (49%), Gaps = 12/153 (7%)
Query: 23 LEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDAT 82
+ P+ +++N +I C L +D A+++F + + P+ T+ L+D CKE R+D+A
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV 242
Query: 83 MMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN----------- 131
++ +M +G + V Y+ LIDG K ++ + + M PN
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGL 302
Query: 132 -IAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
+ G+ +A+ L + M+ + +P+ + TL +
Sbjct: 303 CLKGKLDKAVSLLERMVSSKCIPNDVTYGTLIN 335
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 79/175 (45%), Gaps = 18/175 (10%)
Query: 5 ECHL-DAALKLFGQLTDR-GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC----VQL 58
+ HL D A+ LF ++ D + + ++N+++ + ++ ++ + + +
Sbjct: 124 KAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNI 183
Query: 59 KPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
PN ++F ++I A CK +D A +F M E+ + TY L+DG K + + A
Sbjct: 184 SPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVL 243
Query: 119 VYEEMCENNISPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
+ +EM SP+ G T +L D+M G +P+ + +TL
Sbjct: 244 LLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTL 298
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 8 LDAALKLFGQL---TDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
+DAALKL+ ++ + +PD++TYN ++ G C + AV L + P+ IT
Sbjct: 518 MDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVIT 577
Query: 65 FTILIDAFC-KEGRMDDATMMFSKMLEKGPKANVVTYSCLI 104
++ K D +++ + K V+ +C I
Sbjct: 578 CNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTI 618
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 12/172 (6%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K ++ AL L ++ D G+ P++ YN +I C + EA LF+++ + L+PN
Sbjct: 342 LRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPN 401
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T++ILID FC+ G++D A +M++ G K +V Y+ LI+G+ K ++ +A
Sbjct: 402 DVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMA 461
Query: 122 EMCENNISPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
EM + P + G+ +A++LY M GI P +TL
Sbjct: 462 EMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTL 513
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 84/151 (55%), Gaps = 12/151 (7%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
+ AA ++ ++ LEP ++TY +++ GYCS ++++A++L+ ++T + P+ TFT
Sbjct: 453 ISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTT 512
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
L+ + G + DA +F++M E K N VTY+ +I+GY + +M AF+ +EM E
Sbjct: 513 LLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKG 572
Query: 128 ISPN------------IAGRPTEAMQLYDSM 146
I P+ + G+ +EA D +
Sbjct: 573 IVPDTYSYRPLIHGLCLTGQASEAKVFVDGL 603
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 1 MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
M + LD AL G++ D GL+ + YN++I G+C + A ++ +L+P
Sbjct: 411 MFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEP 470
Query: 61 NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
+T+T L+ +C +G+++ A ++ +M KG ++ T++ L+ G F++ ++ A ++
Sbjct: 471 TVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLF 530
Query: 121 EEMCENNISPNIA------------GRPTEAMQLYDSMLRNGIMPD 154
EM E N+ PN G ++A + M GI+PD
Sbjct: 531 NEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPD 576
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 82/163 (50%), Gaps = 12/163 (7%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
+E + A + ++T++G+ PD +Y +I G C + EA + L + N I
Sbjct: 554 EEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEI 613
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
+T L+ FC+EG++++A + +M+++G ++V Y LIDG K ++ K F + +EM
Sbjct: 614 CYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEM 673
Query: 124 CENNISPN------------IAGRPTEAMQLYDSMLRNGIMPD 154
+ + P+ G EA ++D M+ G +P+
Sbjct: 674 HDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPN 716
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 84/172 (48%), Gaps = 12/172 (6%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
++ AL+L+ ++T +G+ P I T+ T++ G + +AV+LF ++ +KPN +T+ +
Sbjct: 488 INKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNV 547
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
+I+ +C+EG M A +M EKG + +Y LI G + A + + + N
Sbjct: 548 MIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGN 607
Query: 128 ISPN------------IAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQ 167
N G+ EA+ + M++ G+ D + L D +L+
Sbjct: 608 CELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLK 659
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 85/191 (44%), Gaps = 47/191 (24%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI------- 63
A ++ + + G P+ +TY +I G C ++EA L K+ V PN +
Sbjct: 701 AFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLD 760
Query: 64 ----------------------------TFTILIDAFCKEGRMDDATMMFSKMLEKGPKA 95
T+ +LI FC++GR+++A+ + ++M+ G
Sbjct: 761 ILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSP 820
Query: 96 NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN------------IAGRPTEAMQLY 143
+ +TY+ +I+ + ++K A +++ M E I P+ +AG +A +L
Sbjct: 821 DCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELR 880
Query: 144 DSMLRNGIMPD 154
+ MLR G++P+
Sbjct: 881 NEMLRQGLIPN 891
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 12/174 (6%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L+K H A++LF + G+ PD+ Y +I C L L A ++ + N
Sbjct: 202 LVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVN 261
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+ + +LID CK+ ++ +A + + K K +VVTY L+ G K Q + ++ +
Sbjct: 262 IVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMD 321
Query: 122 EMCENNISPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
EM SP+ A G+ EA+ L ++ G+ P+ + + L D
Sbjct: 322 EMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALID 375
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 12/162 (7%)
Query: 14 LFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFC 73
L ++ DRGL+PD + Y ++I EA +++ + PN +T+T +I+ C
Sbjct: 669 LLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLC 728
Query: 74 KEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQ-NMKSAFDVYEEMCE----NNI 128
K G +++A ++ SKM N VTY C +D K + +M+ A +++ + + N
Sbjct: 729 KAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTA 788
Query: 129 SPNI-------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
+ N+ GR EA +L M+ +G+ PD + +T+ +
Sbjct: 789 TYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMIN 830
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 70/130 (53%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K+ + A+ + L + L+PD++TY T++ G C + + +++ +++ C++ P+
Sbjct: 272 LCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPS 331
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+ L++ K G++++A + ++++ G N+ Y+ LID K + A +++
Sbjct: 332 EAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFD 391
Query: 122 EMCENNISPN 131
M + + PN
Sbjct: 392 RMGKIGLRPN 401
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 60/126 (47%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
LD L +T L P++ T + ++ G A++LF + V ++P+ +T
Sbjct: 173 LDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTG 232
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
+I + C+ + A M + M G N+V Y+ LIDG K Q + A + +++ +
Sbjct: 233 VIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKD 292
Query: 128 ISPNIA 133
+ P++
Sbjct: 293 LKPDVV 298
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 50/89 (56%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
++ ++ A +L ++ G+ PD ITY T+I C N + +A++L+ +T ++P+ +
Sbjct: 799 RQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRV 858
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKG 92
+ LI C G M AT + ++ML +G
Sbjct: 859 AYNTLIHGCCVAGEMGKATELRNEMLRQG 887
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
A++L+ +T++G+ PD + YNT+I G C + +A +L ++ L PN+ T
Sbjct: 841 AIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 90/166 (54%), Gaps = 12/166 (7%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
+ A+ L ++ +G D++TYNTI+ G C L EA +LF ++T L P+S T TI
Sbjct: 426 ISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTI 485
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
LID CK G + +A +F KM EK + +VVTY+ L+DG+ K ++ +A +++ +M
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545
Query: 128 ISPN------------IAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
I P G EA +++D M+ I P ++ +++
Sbjct: 546 ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSM 591
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 88/172 (51%), Gaps = 12/172 (6%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K L A KLF ++T+R L PD T +I G+C L L A++LF+K+ +++ +
Sbjct: 455 LCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLD 514
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T+ L+D F K G +D A +++ M+ K ++YS L++ ++ AF V++
Sbjct: 515 VVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWD 574
Query: 122 EMCENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
EM NI P + +G ++ + M+ G +PD + +TL
Sbjct: 575 EMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTL 626
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 68/117 (58%), Gaps = 2/117 (1%)
Query: 17 QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ--LKPNSITFTILIDAFCK 74
++ G PD I+YNT+I G+ + +A L +K+ Q L P+ T+ ++ FC+
Sbjct: 610 KMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCR 669
Query: 75 EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN 131
+ +M +A ++ KM+E+G + TY+C+I+G+ N+ AF +++EM + SP+
Sbjct: 670 QNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 84/172 (48%), Gaps = 12/172 (6%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K+ ++ Q+ ++G+ PDI+TYNT+I Y S ++EA +L + P
Sbjct: 245 LCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPG 304
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
T+ +I+ CK G+ + A +F++ML G + TY L+ K ++ V+
Sbjct: 305 VYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFS 364
Query: 122 EMCENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
+M ++ P++ +G +A+ ++S+ G++PD ++ + L
Sbjct: 365 DMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTIL 416
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 79/162 (48%), Gaps = 14/162 (8%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
HL A +++ ++ + ++P ++ N++I GYC + EK+ P+ I++
Sbjct: 565 HLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYN 624
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEK--GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
LI F +E M A + KM E+ G +V TY+ ++ G+ + MK A V +M
Sbjct: 625 TLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI 684
Query: 125 ENNISPN-------IAG-----RPTEAMQLYDSMLRNGIMPD 154
E ++P+ I G TEA +++D ML+ G PD
Sbjct: 685 ERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 83/163 (50%), Gaps = 12/163 (7%)
Query: 13 KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
K+F + R + PD++ +++++ + LD+A+ F + L P+++ +TILI +
Sbjct: 361 KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY 420
Query: 73 CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
C++G + A + ++ML++G +VVTY+ ++ G K + + A ++ EM E + P+
Sbjct: 421 CRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDS 480
Query: 133 ------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
G AM+L+ M I D + +TL D
Sbjct: 481 YTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLD 523
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 79/171 (46%), Gaps = 12/171 (7%)
Query: 3 IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
++ L A + F L +G I N +I + ++ A ++++++ + N
Sbjct: 176 VQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINV 235
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
T I+++A CK+G+M+ S++ EKG ++VTY+ LI Y M+ AF++
Sbjct: 236 YTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNA 295
Query: 123 MCENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
M SP + G+ A +++ MLR+G+ PD +L
Sbjct: 296 MPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 12/174 (6%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K + A ++F ++ GL PD TY +++ C + E ++F + + P+
Sbjct: 315 LCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPD 374
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+ F+ ++ F + G +D A M F+ + E G + V Y+ LI GY + + A ++
Sbjct: 375 LVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRN 434
Query: 122 EMCENNISPNIAGRPT------------EAMQLYDSMLRNGIMPDGLLLSTLAD 163
EM + + ++ T EA +L++ M + PD L+ L D
Sbjct: 435 EMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILID 488
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 77/161 (47%), Gaps = 14/161 (8%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
+D A +++ + + + P I+Y+ ++ CS L EA ++++++ +KP +
Sbjct: 531 IDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNS 590
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE-- 125
+I +C+ G D KM+ +G + ++Y+ LI G+ + +NM AF + ++M E
Sbjct: 591 MIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQ 650
Query: 126 NNISPNI------------AGRPTEAMQLYDSMLRNGIMPD 154
+ P++ + EA + M+ G+ PD
Sbjct: 651 GGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPD 691
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 82/172 (47%), Gaps = 12/172 (6%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L++ ++ A ++ +++ G+ ++ T N ++ C ++++ ++ + P+
Sbjct: 210 LVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPD 269
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T+ LI A+ +G M++A + + M KG V TY+ +I+G K + A +V+
Sbjct: 270 IVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFA 329
Query: 122 EMCENNISPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
EM + +SP+ G E +++ M ++PD + S++
Sbjct: 330 EMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSM 381
>sp|Q9SAJ5|PP133_ARATH Pentatricopeptide repeat-containing protein At1g79540
OS=Arabidopsis thaliana GN=At1g79540 PE=2 SV=1
Length = 780
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 84/165 (50%), Gaps = 12/165 (7%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K+ A K+F +T RG+ P+ +TY +I G C D+A +LF ++ P+
Sbjct: 208 LYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPD 267
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
S+ L+D FCK GRM +A + + G + YS LIDG F+++ AF++Y
Sbjct: 268 SVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYA 327
Query: 122 EMCENNISPNI------------AGRPTEAMQLYDSMLRNGIMPD 154
M + NI P+I AG+ +A++L SM GI PD
Sbjct: 328 NMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPD 372
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 90/188 (47%), Gaps = 13/188 (6%)
Query: 1 MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
M+ +E A ++ ++ P++ T+ ++ G R +A ++F+ +T + P
Sbjct: 172 MMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISP 231
Query: 61 NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
N +T+TILI C+ G DDA +F +M G + V ++ L+DG+ K M AF++
Sbjct: 232 NRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELL 291
Query: 121 EEMCENNISPNIAG------------RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQS 168
++ + G R T+A +LY +ML+ I PD ++L T+ L
Sbjct: 292 RLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPD-IILYTILIQGLSK 350
Query: 169 SGSQEHCI 176
+G E +
Sbjct: 351 AGKIEDAL 358
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 63/115 (54%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K ++ ALKL + +G+ PD YN +I C L+E L +++ + P+
Sbjct: 348 LSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPD 407
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSA 116
+ T TILI + C+ G + +A +F+++ + G +V T++ LIDG KS +K A
Sbjct: 408 ACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEA 462
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 10/114 (8%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A + D G PDI++YN +I G+C +D A++L L L P+S+T+ LI+
Sbjct: 501 AYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLIN 560
Query: 71 AFCKEGRMDDATMMFSKM--LEKGPKA--NVVTYSCLIDGYFKSQNMKSAFDVY 120
+ GR ++A +F P +++T+SC + + + AF+++
Sbjct: 561 GLHRVGREEEAFKLFYAKDDFRHSPAVYRSLMTWSC------RKRKVLVAFNLW 608
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 74/182 (40%), Gaps = 39/182 (21%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEA---VQLFEKLTCV--------- 56
D A KLF ++ G PD + +N ++ G+C L R+ EA ++LFEK V
Sbjct: 250 DDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSL 309
Query: 57 -----------------------QLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGP 93
+KP+ I +TILI K G+++DA + S M KG
Sbjct: 310 IDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGI 369
Query: 94 KANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIAGRPTEAMQLYDSMLRNGIMP 153
+ Y+ +I ++ + EM E P+ L SM RNG++
Sbjct: 370 SPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTI----LICSMCRNGLVR 425
Query: 154 DG 155
+
Sbjct: 426 EA 427
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 70/168 (41%), Gaps = 17/168 (10%)
Query: 25 PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
PD T+ +IC C + EA ++F ++ P+ TF LID CK G + +A ++
Sbjct: 406 PDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLL 465
Query: 85 FSKMLEKGPKANVVTYSC----LIDGYFKSQNMKSAFDVYEEMCENNISPNI-------- 132
KM P + + S D +S ++ A+ + SP+I
Sbjct: 466 LHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLIN 525
Query: 133 ----AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHCI 176
AG A++L + + G+ PD + +TL + L G +E
Sbjct: 526 GFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLIN-GLHRVGREEEAF 572
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 13/134 (9%)
Query: 41 NRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTY 100
N D Q E+L + +S F +LI A+ K G + A F +M E + +V TY
Sbjct: 106 NGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTY 165
Query: 101 SCLIDGYFKSQN-MKSAFDVYEEMCENNISPNI------------AGRPTEAMQLYDSML 147
+ ++ + + AF VY EM + N SPN+ GR ++A +++D M
Sbjct: 166 NVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMT 225
Query: 148 RNGIMPDGLLLSTL 161
GI P+ + + L
Sbjct: 226 GRGISPNRVTYTIL 239
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 67/161 (41%), Gaps = 39/161 (24%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL----------------- 53
A ++F ++ G P + T+N +I G C L EA L K+
Sbjct: 427 AEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGN 486
Query: 54 ----TCVQ----LK--------------PNSITFTILIDAFCKEGRMDDATMMFSKMLEK 91
T V+ LK P+ +++ +LI+ FC+ G +D A + + + K
Sbjct: 487 RSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLK 546
Query: 92 GPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
G + VTY+ LI+G + + AF ++ + SP +
Sbjct: 547 GLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAV 587
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
+D ALKL L +GL PD +TYNT+I G + R +EA +LF + P +
Sbjct: 533 IDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSP--AVYRS 590
Query: 68 LIDAFCKEGRMDDATMMFSKMLEK 91
L+ C++ ++ A ++ K L+K
Sbjct: 591 LMTWSCRKRKVLVAFNLWMKYLKK 614
Score = 38.9 bits (89), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 52/116 (44%), Gaps = 17/116 (14%)
Query: 65 FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSC--LIDGYFKSQNMKSAFDVYEE 122
+TI + C+ GR +A M+FS + EK K V SC LI G K + + +A +V+
Sbjct: 657 YTIWLIGLCQSGRFHEALMVFSVLREK--KILVTPPSCVKLIHGLCKREQLDAAIEVFLY 714
Query: 123 MCENNIS--PNIAG-------RPTEAM----QLYDSMLRNGIMPDGLLLSTLADYN 165
+NN P + TE M QL + M R G D +L + Y+
Sbjct: 715 TLDNNFKLMPRVCNYLLSSLLESTEKMEIVSQLTNRMERAGYNVDSMLRFEILKYH 770
>sp|Q9FNL2|PP418_ARATH Pentatricopeptide repeat-containing protein At5g46100
OS=Arabidopsis thaliana GN=At5g46100 PE=2 SV=1
Length = 472
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 81/162 (50%), Gaps = 12/162 (7%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
+DA LK+F ++ RG +PD TY T+I G C R+DEA +LF ++ P +T+T
Sbjct: 173 VDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTS 232
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
LI+ C +D+A +M KG + NV TYS L+DG K A +++E M
Sbjct: 233 LINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARG 292
Query: 128 ISPNIAGRPT------------EAMQLYDSMLRNGIMPDGLL 157
PN+ T EA++L D M G+ PD L
Sbjct: 293 CRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGL 334
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 18/163 (11%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
++D A++ ++ +G+EP++ TY++++ G C R +A++LFE + +PN +T+T
Sbjct: 242 NVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYT 301
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
LI CKE ++ +A + +M +G K + Y +I G+ + A + +EM
Sbjct: 302 TLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILG 361
Query: 127 NISPN------------------IAGRPTEAMQLYDSMLRNGI 151
I+PN A P+ A LY SM GI
Sbjct: 362 GITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGI 404
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 86/199 (43%), Gaps = 48/199 (24%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
+L++F ++ D +P Y T++ N+L+ A + ++ + + L P + +LI
Sbjct: 105 SLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIK 164
Query: 71 AFCKE------------------------------------GRMDDATMMFSKMLEKGPK 94
A C+ GR+D+A +F++M+EK
Sbjct: 165 ALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCA 224
Query: 95 ANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI------------AGRPTEAMQL 142
VVTY+ LI+G S+N+ A EEM I PN+ GR +AM+L
Sbjct: 225 PTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMEL 284
Query: 143 YDSMLRNGIMPDGLLLSTL 161
++ M+ G P+ + +TL
Sbjct: 285 FEMMMARGCRPNMVTYTTL 303
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 61/137 (44%), Gaps = 8/137 (5%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L KE + A++L ++ +GL+PD Y +I G+C++++ EA +++ + PN
Sbjct: 307 LCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPN 366
Query: 62 SITFTI-------LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMK 114
+T+ I ++ C T+ S M +G V T L+ K +
Sbjct: 367 RLTWNIHVKTSNEVVRGLCANYPSRAFTLYLS-MRSRGISVEVETLESLVKCLCKKGEFQ 425
Query: 115 SAFDVYEEMCENNISPN 131
A + +E+ + P+
Sbjct: 426 KAVQLVDEIVTDGCIPS 442
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 93/166 (56%), Gaps = 15/166 (9%)
Query: 1 MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
+ +KE A+KL+ ++T R ++PD+ TYN++I G C R+DEA Q+ + + P
Sbjct: 253 VFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLP 312
Query: 61 NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
+ +T+ LI+ FCK R+D+ T +F +M ++G + +TY+ +I GYF++ +A +++
Sbjct: 313 DVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIF 372
Query: 121 EEMCENNISPNIA------------GRPTEAMQLYDSMLRNGIMPD 154
M + PNI R +A+ L+++M ++ I D
Sbjct: 373 SRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELD 415
Score = 96.3 bits (238), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 87/165 (52%), Gaps = 12/165 (7%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A+ L ++ + G PD++ YNTII G C + +++AV+LF+++ ++ +++T+ L+
Sbjct: 158 AIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVA 217
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
C GR DA + M+ + NV+T++ +ID + K A +YEEM + P
Sbjct: 218 GLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDP 277
Query: 131 NI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
++ GR EA Q+ D M+ G +PD + +TL +
Sbjct: 278 DVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLIN 322
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 89/165 (53%), Gaps = 12/165 (7%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
AL + G++ G EPD++T +++I G+C NR+ +A+ L K+ + +P+ + + +ID
Sbjct: 123 ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIID 182
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
CK G ++DA +F +M G +A+ VTY+ L+ G S A + +M +I P
Sbjct: 183 GSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP 242
Query: 131 NI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
N+ G+ +EAM+LY+ M R + PD ++L +
Sbjct: 243 NVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLIN 287
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 15/162 (9%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K +D KLF ++ RGL D ITYNTII GY R D A ++F ++ +PN
Sbjct: 326 KSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIR 382
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T++IL+ C R++ A ++F M + + ++ TY+ +I G K N++ A+D++ +
Sbjct: 383 TYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSL 442
Query: 124 CENNISPNIAGRPT------------EAMQLYDSMLRNGIMP 153
+ P++ T ++ LY M +G++P
Sbjct: 443 SCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 77/148 (52%), Gaps = 12/148 (8%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A +L + R + P++IT+ +I + + EA++L+E++T + P+ T+ LI+
Sbjct: 228 AARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLIN 287
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
C GR+D+A M M+ KG +VVTY+ LI+G+ KS+ + ++ EM + +
Sbjct: 288 GLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVG 347
Query: 131 NI------------AGRPTEAMQLYDSM 146
+ AGRP A +++ M
Sbjct: 348 DTITYNTIIQGYFQAGRPDAAQEIFSRM 375
Score = 70.1 bits (170), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 86/174 (49%), Gaps = 12/174 (6%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
+ K + D + LF + G+ D+ +YN +I C +R A+ + K+ +P+
Sbjct: 79 IAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPD 138
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T + LI+ FC+ R+ DA + SKM E G + +VV Y+ +IDG K + A ++++
Sbjct: 139 VVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFD 198
Query: 122 EMCENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
M + + + +GR ++A +L M+ I+P+ + + + D
Sbjct: 199 RMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVID 252
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 78/168 (46%), Gaps = 12/168 (7%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+L+ + LF ++ P I+ ++ ++ D + LF + + + ++
Sbjct: 49 NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
I+I+ C+ R A + KM++ G + +VVT S LI+G+ + + A D+ +M E
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168
Query: 127 NISPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTLA 162
P++ G +A++L+D M R+G+ D + ++L
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLV 216
>sp|Q9ZUA2|PP141_ARATH Pentatricopeptide repeat-containing protein At2g01740
OS=Arabidopsis thaliana GN=At2g01740 PE=3 SV=1
Length = 559
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 95/177 (53%), Gaps = 12/177 (6%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K L ALK F + L P+++T+ +I GYC L+ AV L++++ V++ N +
Sbjct: 175 KSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVV 234
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+T LID FCK+G M A M+S+M+E + N + Y+ +IDG+F+ + +A +M
Sbjct: 235 TYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKM 294
Query: 124 CENNISPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQS 168
+ +I G+ EA ++ + M ++ ++PD ++ +T+ + +S
Sbjct: 295 LNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKS 351
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 85/170 (50%), Gaps = 17/170 (10%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K + AA+ ++ +L +RG EPD++ +T+I G +L EA+ F C++ K N +
Sbjct: 350 KSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF----CIE-KANDV 404
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
+T+LIDA CKEG + +FSK+ E G + Y+ I G K N+ AF + M
Sbjct: 405 MYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRM 464
Query: 124 CENNISPNIAGRPT------------EAMQLYDSMLRNGIMPDGLLLSTL 161
+ + ++ T EA Q++D ML +GI PD + L
Sbjct: 465 VQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLL 514
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 77/153 (50%), Gaps = 16/153 (10%)
Query: 25 PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
P+++TY+T I +C L A++ F + L PN +TFT LID +CK G ++ A +
Sbjct: 161 PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSL 220
Query: 85 FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI------------ 132
+ +M NVVTY+ LIDG+ K M+ A ++Y M E+ + PN
Sbjct: 221 YKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQ 280
Query: 133 AGRPTEAMQLYDSMLRNGIMPD----GLLLSTL 161
G AM+ ML G+ D G+++S L
Sbjct: 281 RGDSDNAMKFLAKMLNQGMRLDITAYGVIISGL 313
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 81/159 (50%), Gaps = 7/159 (4%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
D A+K ++ ++G+ DI Y II G C +L EA ++ E + L P+ + FT +
Sbjct: 285 DNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTM 344
Query: 69 IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
++A+ K GRM A M+ K++E+G + +VV S +IDG K+ + A + N++
Sbjct: 345 MNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDV 404
Query: 129 SPNI-------AGRPTEAMQLYDSMLRNGIMPDGLLLST 160
+ G E +L+ + G++PD + ++
Sbjct: 405 MYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTS 443
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L KE +LF ++++ GL PD Y + I G C L +A +L ++ L +
Sbjct: 413 LCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLD 472
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+ +T LI +G M +A +F +ML G + + LI Y K NM +A D+
Sbjct: 473 LLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLL 532
Query: 122 EM 123
+M
Sbjct: 533 DM 534
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 77/168 (45%), Gaps = 16/168 (9%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
+LK L RG P ++N+++ C L ++ A + + +P+ I++ LID
Sbjct: 40 SLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLID 99
Query: 71 AFCKEGRMDDATMMFSKMLEKGP---KANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
C+ G + A+++ + K ++V+++ L +G+ K + + F VY +
Sbjct: 100 GHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLKC 158
Query: 128 ISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
SPN+ +G A++ + SM R+ + P+ + + L D
Sbjct: 159 CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLID 206
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K+ +L A KL ++ GL D++ Y T+I G S + EA Q+F+++ + P+
Sbjct: 448 LCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPD 507
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSC 102
S F +LI A+ KEG M A+ + M +G V C
Sbjct: 508 SAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAVSDADC 548
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 96.3 bits (238), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 86/157 (54%), Gaps = 12/157 (7%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
+KE L A +L ++ RG+ PD +TY ++I G+C N+LD+A + + + PN
Sbjct: 327 FVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPN 386
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
TF ILI+ +CK +DD +F KM +G A+ VTY+ LI G+ + ++ A ++++
Sbjct: 387 IRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQ 446
Query: 122 EMCENNISPNIA------------GRPTEAMQLYDSM 146
EM + P+I G P +A+++++ +
Sbjct: 447 EMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 88/172 (51%), Gaps = 12/172 (6%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K+ LD A LF ++ +G + DII Y T+I G+C R D+ +L + ++ P+
Sbjct: 257 LCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPD 316
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+ F+ LID F KEG++ +A + +M+++G + VTY+ LIDG+ K + A + +
Sbjct: 317 VVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLD 376
Query: 122 EMCENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
M PNI A + ++L+ M G++ D + +TL
Sbjct: 377 LMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTL 428
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 94/179 (52%), Gaps = 18/179 (10%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
KE LD A + + +G P+I T+N +I GYC N +D+ ++LF K++ + +++
Sbjct: 364 KENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTV 423
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+ LI FC+ G+++ A +F +M+ + + ++V+Y L+DG + + A +++E++
Sbjct: 424 TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Query: 124 CENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSG 170
++ + +I A + +A L+ S+ G+ PD + YN+ G
Sbjct: 484 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPD------VKTYNIMIGG 536
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 12/171 (7%)
Query: 5 ECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
E + AL+L ++ + G +P +IT N ++ G C ++ +AV L +++ +PN +T
Sbjct: 155 EGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVT 214
Query: 65 FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
+ ++ CK G+ A + KM E+ K + V YS +IDG K ++ +AF+++ EM
Sbjct: 215 YGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 274
Query: 125 ENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
+I AGR + +L M++ I PD + S L D
Sbjct: 275 IKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALID 325
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 67/121 (55%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A++L ++ +R ++ D + Y+ II G C LD A LF ++ K + I +T LI
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
FC GR DD + M+++ +VV +S LID + K ++ A ++++EM + ISP
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350
Query: 131 N 131
+
Sbjct: 351 D 351
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 91/179 (50%), Gaps = 16/179 (8%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
L+ A +LF ++ R + PDI++Y ++ G C ++A+++FEK+ +++ + +
Sbjct: 437 KLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYN 496
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
I+I C ++DDA +F + KG K +V TY+ +I G K ++ A ++ +M E+
Sbjct: 497 IIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEED 556
Query: 127 NISPN------------IAGRPTEAMQLYDSMLRNGIMPDG----LLLSTLADYNLQSS 169
SPN G T++ +L + + R G D +++ L+D L+ S
Sbjct: 557 GHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKS 615
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 12/167 (7%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
D L L Q+ +G+ ++ T + +I C +L A K+ + +P+++TF+ L
Sbjct: 89 DLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTL 148
Query: 69 IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
I+ C EGR+ +A + +M+E G K ++T + L++G + + A + + M E
Sbjct: 149 INGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGF 208
Query: 129 SPN------------IAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
PN +G+ AM+L M I D + S + D
Sbjct: 209 QPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIID 255
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+D A LF L +G++PD+ TYN +I G C L EA LF K+ PN T+
Sbjct: 507 KVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYN 566
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
ILI A EG + + ++ G + T ++D + KS D+
Sbjct: 567 ILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKSFLDM 619
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 71/158 (44%), Gaps = 12/158 (7%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
D A+ LF ++T P +I ++ + + D + L +++ + N T +I+
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 69 IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
I+ C+ ++ A K+++ G + + VT+S LI+G + A ++ + M E
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 129 SPNIA------------GRPTEAMQLYDSMLRNGIMPD 154
P + G+ ++A+ L D M+ G P+
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPN 211
>sp|Q9ZUE9|PP149_ARATH Pentatricopeptide repeat-containing protein At2g06000
OS=Arabidopsis thaliana GN=At2g06000 PE=2 SV=1
Length = 536
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 92/168 (54%), Gaps = 13/168 (7%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQL-KPNSITFTI 67
+ AL+L G ++ G EPDI+TYNT+I G+C N L++A ++F+ + + P+ +T+T
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTS 282
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
+I +CK G+M +A+ + ML G VT++ L+DGY K+ M +A ++ +M
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFG 342
Query: 128 ISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
P++ G+ ++ +L++ M G+ P+ S L +
Sbjct: 343 CFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILIN 390
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 92/175 (52%), Gaps = 12/175 (6%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A ++ G++ G PD++T+ ++I GYC + ++ + +L+E++ + PN+ T++ILI+
Sbjct: 331 AEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILIN 390
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
A C E R+ A + ++ K Y+ +IDG+ K+ + A + EEM + P
Sbjct: 391 ALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKP 450
Query: 131 N------------IAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 173
+ + GR EA+ ++ M+ G PD + +S+L L++ ++E
Sbjct: 451 DKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKE 505
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 71/129 (55%), Gaps = 1/129 (0%)
Query: 4 KECHLDAALKLFGQLTDRGL-EPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
K L+ A ++F + + PD++TY ++I GYC ++ EA L + + + + P +
Sbjct: 253 KSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTN 312
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
+TF +L+D + K G M A + KM+ G +VVT++ LIDGY + + F ++EE
Sbjct: 313 VTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEE 372
Query: 123 MCENNISPN 131
M + PN
Sbjct: 373 MNARGMFPN 381
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 3/132 (2%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L E L A +L GQL + + P YN +I G+C +++EA + E++ + KP+
Sbjct: 392 LCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPD 451
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF---D 118
ITFTILI C +GRM +A +F KM+ G + +T S L+ K+ K A+
Sbjct: 452 KITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQ 511
Query: 119 VYEEMCENNISP 130
+ + NN+ P
Sbjct: 512 IARKGQSNNVVP 523
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 88/176 (50%), Gaps = 15/176 (8%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L+K ++ A+KLF + D T+N +I G C + + ++A++L ++ +P+
Sbjct: 181 LVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPD 240
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGP--KANVVTYSCLIDGYFKSQNMKSAFDV 119
+T+ LI FCK ++ A+ MF K ++ G +VVTY+ +I GY K+ M+ A +
Sbjct: 241 IVTYNTLIQGFCKSNELNKASEMF-KDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSL 299
Query: 120 YEEMCENNISP-NI-----------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
++M I P N+ AG A ++ M+ G PD + ++L D
Sbjct: 300 LDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLID 355
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 78/149 (52%), Gaps = 13/149 (8%)
Query: 28 ITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
+ N+++ L+R+++A++LF++ Q ++ TF ILI C G+ + A +
Sbjct: 172 MVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGV 231
Query: 88 MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI-SPNI------------AG 134
M G + ++VTY+ LI G+ KS + A ++++++ ++ SP++ AG
Sbjct: 232 MSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAG 291
Query: 135 RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
+ EA L D MLR GI P + + L D
Sbjct: 292 KMREASSLLDDMLRLGIYPTNVTFNVLVD 320
Score = 37.0 bits (84), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 64/145 (44%), Gaps = 14/145 (9%)
Query: 29 TYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
TYN + C D A Q+FE + + PN+ L+ +F ++G++ AT + +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 89 LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM-----CENNISPNI-------AGRP 136
E VV + L++ K ++ A +++E C + + NI G+
Sbjct: 165 FEVEGCCMVV--NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 137 TEAMQLYDSMLRNGIMPDGLLLSTL 161
+A++L M G PD + +TL
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTL 247
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 95/172 (55%), Gaps = 12/172 (6%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L KE ++ A +L LT +G+ PD+ T+N++I G C A++LFE++ +P+
Sbjct: 375 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPD 434
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
T+ +LID+ C +G++D+A M +M G +V+TY+ LIDG+ K+ + A ++++
Sbjct: 435 EFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFD 494
Query: 122 EMCENNISPN-------IAG-----RPTEAMQLYDSMLRNGIMPDGLLLSTL 161
EM + +S N I G R +A QL D M+ G PD ++L
Sbjct: 495 EMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSL 546
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 82/156 (52%), Gaps = 12/156 (7%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
LD AL + Q+ G +ITYNT+I G+C N+ EA ++F+++ + NS+T+
Sbjct: 451 LDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNT 510
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
LID CK R++DA + +M+ +G K + TY+ L+ + + ++K A D+ + M N
Sbjct: 511 LIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNG 570
Query: 128 ISPNI------------AGRPTEAMQLYDSMLRNGI 151
P+I AGR A +L S+ GI
Sbjct: 571 CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGI 606
Score = 87.0 bits (214), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 74/130 (56%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K H+ A+++ + G +PD+ TYN++I G C L + EAV++ +++ PN
Sbjct: 305 LCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPN 364
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
++T+ LI CKE ++++AT + + KG +V T++ LI G ++N + A +++E
Sbjct: 365 TVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFE 424
Query: 122 EMCENNISPN 131
EM P+
Sbjct: 425 EMRSKGCEPD 434
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 14/176 (7%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K ++ A +L Q+ G +PD TYN+++ +C + +A + + +T +P+
Sbjct: 515 LCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPD 574
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T+ LI CK GR++ A+ + + KG Y+ +I G F+ + A +++
Sbjct: 575 IVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFR 634
Query: 122 EMCENNISP--------------NIAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
EM E N +P N G EA+ +L G +P+ L LA+
Sbjct: 635 EMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAE 690
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 77/152 (50%), Gaps = 13/152 (8%)
Query: 16 GQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKE 75
+++ G++PD+ T+N +I C ++L A+ + E + L P+ TFT ++ + +E
Sbjct: 178 AKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEE 237
Query: 76 GRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC-ENNISPN--- 131
G +D A + +M+E G + V+ + ++ G+ K ++ A + +EM ++ P+
Sbjct: 238 GDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYT 297
Query: 132 ---------IAGRPTEAMQLYDSMLRNGIMPD 154
AG A+++ D ML+ G PD
Sbjct: 298 FNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPD 329
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 85/173 (49%), Gaps = 13/173 (7%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L + L A+ + + GL PD T+ T++ GY LD A+++ E++ +
Sbjct: 199 LCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWS 258
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKML-EKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
+++ +++ FCKEGR++DA +M + G + T++ L++G K+ ++K A ++
Sbjct: 259 NVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIM 318
Query: 121 EEMCENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
+ M + P++ G EA+++ D M+ P+ + +TL
Sbjct: 319 DVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTL 371
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 77/173 (44%), Gaps = 13/173 (7%)
Query: 4 KECHLDAALKLFGQLTDR-GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
KE ++ AL +++++ G PD T+NT++ G C + A+++ + + P+
Sbjct: 271 KEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDV 330
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
T+ +I CK G + +A + +M+ + N VTY+ LI K ++ A ++
Sbjct: 331 YTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARV 390
Query: 123 MCENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
+ I P++ AM+L++ M G PD + L D
Sbjct: 391 LTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLID 443
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 82/182 (45%), Gaps = 15/182 (8%)
Query: 9 DAALKLFGQLTDR-GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
D L + + D GL+PD YN ++ N L K++ +KP+ TF +
Sbjct: 135 DEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNV 194
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE-- 125
LI A C+ ++ A +M M G + T++ ++ GY + ++ A + E+M E
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFG 254
Query: 126 ---NNISPNI-------AGRPTEAMQLYDSML-RNGIMPDGLLLSTLADYNLQSSGSQEH 174
+N+S N+ GR +A+ M ++G PD +TL + L +G +H
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN-GLCKAGHVKH 313
Query: 175 CI 176
I
Sbjct: 314 AI 315
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 91/166 (54%), Gaps = 12/166 (7%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
L L+ + ++ GL+P++++Y+T++ +C + +A++ + + V L PN T+T
Sbjct: 348 LPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTS 407
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
LIDA CK G + DA + ++ML+ G + NVVTY+ LIDG ++ MK A +++ +M
Sbjct: 408 LIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAG 467
Query: 128 ISPNIAGRPT------------EAMQLYDSMLRNGIMPDGLLLSTL 161
+ PN+A A++L + + GI PD LL T
Sbjct: 468 VIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTF 513
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 92/172 (53%), Gaps = 12/172 (6%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
KE ++AA LF ++ RGL PD +TYN++I G+ + RLD+ V FE++ + +P+ I
Sbjct: 274 KEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVI 333
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+ LI+ FCK G++ + +M G K NVV+YS L+D + K M+ A Y +M
Sbjct: 334 TYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDM 393
Query: 124 CENNISPN------------IAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
+ PN G ++A +L + ML+ G+ + + + L D
Sbjct: 394 RRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALID 445
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 93/185 (50%), Gaps = 13/185 (7%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
+K ++D AL+L +L RG++PD++ Y T I G CSL +++ A + ++ +K N
Sbjct: 482 FVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKAN 541
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
S+ +T L+DA+ K G + + +M E + VVT+ LIDG K++ + A D +
Sbjct: 542 SLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFN 601
Query: 122 EMCEN-NISPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQS 168
+ + + N A + A L++ M++ G++PD ++L D N +
Sbjct: 602 RISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQ 661
Query: 169 SGSQE 173
E
Sbjct: 662 GNVLE 666
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
D + F + G P + TYN +I C ++ A LFE++ L P+++T+ +
Sbjct: 244 DDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSM 303
Query: 69 IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
ID F K GR+DD F +M + + +V+TY+ LI+ + K + + Y EM N +
Sbjct: 304 IDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGL 363
Query: 129 SPNIAGRPT------------EAMQLYDSMLRNGIMPDGLLLSTLADYN 165
PN+ T +A++ Y M R G++P+ ++L D N
Sbjct: 364 KPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAN 412
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 88/182 (48%), Gaps = 12/182 (6%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
KE + A+K + + GL P+ TY ++I C + L +A +L ++ V ++ N +
Sbjct: 379 KEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVV 438
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+T LID C RM +A +F KM G N+ +Y+ LI G+ K++NM A ++ E+
Sbjct: 439 TYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL 498
Query: 124 CENNISPN-------IAG-----RPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGS 171
I P+ I G + A + + M GI + L+ +TL D +S
Sbjct: 499 KGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNP 558
Query: 172 QE 173
E
Sbjct: 559 TE 560
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 69/127 (54%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+ A +LFG++ G+ P++ +YN +I G+ +D A++L +L +KP+ + +
Sbjct: 452 RMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYG 511
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
I C +++ A ++ ++M E G KAN + Y+ L+D YFKS N + +EM E
Sbjct: 512 TFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKEL 571
Query: 127 NISPNIA 133
+I +
Sbjct: 572 DIEVTVV 578
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 83/175 (47%), Gaps = 12/175 (6%)
Query: 1 MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
+LI L+ A++ F ++ + P + N ++ + L + D+ + F+ + +P
Sbjct: 201 VLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARP 260
Query: 61 NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
T+ I+ID CKEG ++ A +F +M +G + VTY+ +IDG+ K + +
Sbjct: 261 TVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFF 320
Query: 121 EEMCENNISPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
EEM + P++ G+ ++ Y M NG+ P+ + STL D
Sbjct: 321 EEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVD 375
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
Query: 11 ALKLFGQLT-DRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILI 69
A+ F +++ D GL+ + + +I G C N+++ A LFE++ L P+ +T L+
Sbjct: 596 AVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLM 655
Query: 70 DAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNIS 129
D K+G + +A + KM E G K +++ Y+ L+ G ++ A EEM I
Sbjct: 656 DGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIH 715
Query: 130 PN 131
P+
Sbjct: 716 PD 717
Score = 31.2 bits (69), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/88 (19%), Positives = 46/88 (52%)
Query: 3 IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
K+ ++ AL L ++ + G++ D++ Y +++ G N+L +A E++ + P+
Sbjct: 659 FKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDE 718
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLE 90
+ ++ + G +D+A + S +++
Sbjct: 719 VLCISVLKKHYELGCIDEAVELQSYLMK 746
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 84/161 (52%), Gaps = 12/161 (7%)
Query: 15 FGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCK 74
F Q D P+++TY ++ G+C +R++EA +L + ++ +PN I + LID CK
Sbjct: 627 FKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCK 686
Query: 75 EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI-- 132
G++D+A + ++M E G A + TYS LID YFK + A V +M EN+ +PN+
Sbjct: 687 VGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVI 746
Query: 133 ----------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
G+ EA +L M G P+ + + + D
Sbjct: 747 YTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID 787
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 85/158 (53%), Gaps = 12/158 (7%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
+ A + ++ +G PD TY+ ++ C+ ++++ A LFE++ L + T+TI+
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524
Query: 69 IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
+D+FCK G ++ A F++M E G NVVTY+ LI Y K++ + A +++E M
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584
Query: 129 SPNI------------AGRPTEAMQLYDSMLRNGIMPD 154
PNI AG+ +A Q+++ M + +PD
Sbjct: 585 LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPD 622
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 28/184 (15%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
++ A LF ++ GL D+ TY ++ +C +++A + F ++ V PN +T+T
Sbjct: 499 MELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTA 558
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC--- 124
LI A+ K ++ A +F ML +G N+VTYS LIDG+ K+ ++ A ++E MC
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK 618
Query: 125 -------------ENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLS 159
+N+ PN+ + R EA +L D+M G P+ ++
Sbjct: 619 DVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYD 678
Query: 160 TLAD 163
L D
Sbjct: 679 ALID 682
Score = 76.6 bits (187), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 71/130 (54%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K LD A ++ ++++ G + TY+++I Y + R D A ++ K+ PN
Sbjct: 684 LCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPN 743
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+ +T +ID CK G+ D+A + M EKG + NVVTY+ +IDG+ +++ ++ E
Sbjct: 744 VVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLE 803
Query: 122 EMCENNISPN 131
M ++PN
Sbjct: 804 RMGSKGVAPN 813
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 12/173 (6%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K ++ A KL ++ G EP+ I Y+ +I G C + +LDEA ++ +++
Sbjct: 651 KSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLY 710
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T++ LID + K R D A+ + SKMLE NVV Y+ +IDG K A+ + + M
Sbjct: 711 TYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 770
Query: 124 CENNISPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTLADY 164
E PN+ G+ ++L + M G+ P+ + L D+
Sbjct: 771 EEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDH 823
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 66/126 (52%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
D A K+ ++ + P+++ Y +I G C + + DEA +L + + +PN +T+T +
Sbjct: 726 DLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAM 785
Query: 69 IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
ID F G+++ + +M KG N VTY LID K+ + A ++ EEM + +
Sbjct: 786 IDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHW 845
Query: 129 SPNIAG 134
+ AG
Sbjct: 846 PTHTAG 851
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 90/180 (50%), Gaps = 12/180 (6%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
LD A K + ++ G+ + I ++ CS + ++A + ++ P++ T++
Sbjct: 429 LDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSK 488
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
+++ C +M+ A ++F +M G A+V TY+ ++D + K+ ++ A + EM E
Sbjct: 489 VLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG 548
Query: 128 ISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQEHC 175
+PN+ A + + A +L+++ML G +P+ + S L D + ++ ++ C
Sbjct: 549 CTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC 608
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
D A KL + ++G +P+++TY +I G+ + +++ ++L E++ + PN +T+ +L
Sbjct: 761 DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVL 820
Query: 69 IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
ID CK G +D A + +M + + Y +I+G+ ++ + + +E+ +++
Sbjct: 821 IDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDT 878
Query: 129 SP 130
+P
Sbjct: 879 AP 880
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 3/127 (2%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
AL+ G+L D P TYN +I + +RLD A + +++ L+ + T
Sbjct: 219 ALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAY 278
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
+ CK G+ +A + + + V Y+ LI G ++ + A D M + P
Sbjct: 279 SLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335
Query: 131 NIAGRPT 137
N+ T
Sbjct: 336 NVVTYST 342
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 69/175 (39%), Gaps = 18/175 (10%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
+ A+ ++ P+++TY+T++CG + +L ++ + P+ F
Sbjct: 318 FEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNS 377
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQN------MKSAFDVYE 121
L+ A+C G A + KM++ G V Y+ LI ++ + A Y
Sbjct: 378 LVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYS 437
Query: 122 EMCENNISPN------------IAGRPTEAMQLYDSMLRNGIMPDGLLLSTLADY 164
EM + N AG+ +A + M+ G +PD S + +Y
Sbjct: 438 EMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNY 492
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 52/109 (47%), Gaps = 2/109 (1%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQ--LKPNSITFTIL 68
+L L ++ P + Y +I RL+ A++L E++ L S T+ L
Sbjct: 866 SLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSL 925
Query: 69 IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAF 117
I++ C +++ A +FS+M +KG + ++ LI G F++ + A
Sbjct: 926 IESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 974
Score = 38.1 bits (87), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 76/186 (40%), Gaps = 39/186 (20%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
++ L+L ++ +G+ P+ +TY +I C LD A L E++ ++ +
Sbjct: 795 IETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRK 854
Query: 68 LIDAFCKE-----------GRMDDATM------------------MFSKMLEKGP--KAN 96
+I+ F KE G+ D A M ++LE+ A
Sbjct: 855 VIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSAT 914
Query: 97 VV----TYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIAGRPTEAMQLYDSMLRNGIM 152
+V TY+ LI+ + +++AF ++ EM + + P + L + RN +
Sbjct: 915 LVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQS----FCSLIKGLFRNSKI 970
Query: 153 PDGLLL 158
+ LLL
Sbjct: 971 SEALLL 976
Score = 37.7 bits (86), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/101 (18%), Positives = 47/101 (46%)
Query: 25 PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
PD + Y +I G C + +EA+ ++ PN +T++ L+ + ++ +
Sbjct: 300 PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRV 359
Query: 85 FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
+ M+ +G + ++ L+ Y S + A+ + ++M +
Sbjct: 360 LNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVK 400
Score = 35.8 bits (81), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 2 LIKECHLDAALKLFGQLT--DRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLK 59
LIK L+ AL+L ++ L TYN++I C N+++ A QLF ++T +
Sbjct: 892 LIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVI 951
Query: 60 PNSITFTILIDAFCKEGRMDDATMMF 85
P +F LI + ++ +A ++
Sbjct: 952 PEMQSFCSLIKGLFRNSKISEALLLL 977
Score = 30.8 bits (68), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 30/62 (48%)
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
+L+ C+ G A ++ + + + TY+CLI + K+ + SA ++ EM
Sbjct: 205 VLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLA 264
Query: 127 NI 128
N+
Sbjct: 265 NL 266
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 86/168 (51%), Gaps = 12/168 (7%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
LD A ++ RGL+PD TY+ +ICG ++N+++EA+Q ++ + P+ T+++
Sbjct: 569 LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 628
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
+ID CK R ++ F +M+ K + N V Y+ LI Y +S + A ++ E+M
Sbjct: 629 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 688
Query: 128 ISPN------------IAGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
ISPN I R EA L++ M G+ P+ + L D
Sbjct: 689 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALID 736
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 78/143 (54%), Gaps = 12/143 (8%)
Query: 21 RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDD 80
+G+ PD+ + T I +C +++EAV+LF K+ + PN +TF +ID GR D+
Sbjct: 267 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 326
Query: 81 ATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI-------- 132
A M KM+E+G + ++TYS L+ G +++ + A+ V +EM + PN+
Sbjct: 327 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 386
Query: 133 ----AGRPTEAMQLYDSMLRNGI 151
AG +A+++ D M+ G+
Sbjct: 387 SFIEAGSLNKAIEIKDLMVSKGL 409
Score = 86.7 bits (213), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 82/173 (47%), Gaps = 12/173 (6%)
Query: 13 KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
+ F ++ + ++P+ + YN +I YC RL A++L E + + PNS T+T LI
Sbjct: 644 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 703
Query: 73 CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI 132
R+++A ++F +M +G + NV Y+ LIDGY K M + EM N+ PN
Sbjct: 704 SIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNK 763
Query: 133 A------------GRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGSQE 173
G TEA +L + M GI+PD + L+ G E
Sbjct: 764 ITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLE 816
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
LD A ++ ++ RG D ++YNT+I G C +LDEA +++ LKP++ T++I
Sbjct: 534 LDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSI 593
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
LI ++++A + G +V TYS +IDG K++ + + ++EM N
Sbjct: 594 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 653
Query: 128 ISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
+ PN +GR + A++L + M GI P+ ++L
Sbjct: 654 VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSL 699
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 71/122 (58%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
++ A+KLF ++ + G+ P+++T+NT+I G R DEA EK+ ++P IT++I
Sbjct: 289 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 348
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
L+ + R+ DA + +M +KG NV+ Y+ LID + ++ ++ A ++ + M
Sbjct: 349 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 408
Query: 128 IS 129
+S
Sbjct: 409 LS 410
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 82/170 (48%), Gaps = 15/170 (8%)
Query: 6 CHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF 65
C+L AL +F L ++G+ P T N ++ N + + F+ + C + P+ F
Sbjct: 220 CYL--ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLF 276
Query: 66 TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
T I+AFCK G++++A +FSKM E G NVVT++ +IDG AF E+M E
Sbjct: 277 TTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVE 336
Query: 126 NNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
+ P + A R +A + M + G P+ ++ + L D
Sbjct: 337 RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 386
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 67/125 (53%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
L AL+L + +G+ P+ TY ++I G ++R++EA LFE++ L+PN +T
Sbjct: 673 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYT 732
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
LID + K G+M + +M K N +TY+ +I GY + N+ A + EM E
Sbjct: 733 ALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREK 792
Query: 127 NISPN 131
I P+
Sbjct: 793 GIVPD 797
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 83/172 (48%), Gaps = 12/172 (6%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K AL+L+ Q ++G D T N ++ G C +LDEA ++ +++ +
Sbjct: 493 LCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMD 552
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+++ LI C + ++D+A M +M+++G K + TYS LI G F ++ A ++
Sbjct: 553 RVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWD 612
Query: 122 EMCENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
+ N + P++ A R E + +D M+ + P+ ++ + L
Sbjct: 613 DCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL 664
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 63/116 (54%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
++ A LF ++ GLEP++ Y +I GY L ++ + L ++ + PN IT+T
Sbjct: 708 RVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYT 767
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
++I + ++G + +A+ + ++M EKG + +TY I GY K + AF +E
Sbjct: 768 VMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 823
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 12/168 (7%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
D+AL+ G++ R + P T+I G C + +A++L+ + ++ T
Sbjct: 464 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNA 523
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
L+ C+ G++D+A + ++L +G + V+Y+ LI G + + AF +EM +
Sbjct: 524 LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG 583
Query: 128 ISPN-------IAG-----RPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
+ P+ I G + EA+Q +D RNG++PD S + D
Sbjct: 584 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMID 631
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 12/165 (7%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
D A ++ +RG+EP +ITY+ ++ G R+ +A + +++T PN I + L
Sbjct: 325 DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 384
Query: 69 IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
ID+F + G ++ A + M+ KG TY+ LI GY K+ +A + +EM
Sbjct: 385 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGF 444
Query: 129 SPNIAGRPT------------EAMQLYDSMLRNGIMPDGLLLSTL 161
+ N + A++ ML + P G LL+TL
Sbjct: 445 NVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTL 489
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 12/170 (7%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K D A +L ++ G + ++ ++IC CS D A++ ++ + P
Sbjct: 425 KNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGG 484
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T LI CK G+ A ++ + L KG + T + L+ G ++ + AF + +E+
Sbjct: 485 LLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI 544
Query: 124 -----CENNISPN--IAG-----RPTEAMQLYDSMLRNGIMPDGLLLSTL 161
+ +S N I+G + EA D M++ G+ PD S L
Sbjct: 545 LGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSIL 594
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 90/173 (52%), Gaps = 15/173 (8%)
Query: 6 CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
CH + A+ L Q+ + G +PD +T+ T++ G N+ EAV L E++ +P+
Sbjct: 156 CHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDL 215
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
+T+ +I+ CK G D A + +KM + +A+VV Y+ +IDG K ++M AFD++ +
Sbjct: 216 VTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNK 275
Query: 123 MCENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
M I P++ GR ++A +L ML I PD + + L D
Sbjct: 276 METKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALID 328
Score = 90.1 bits (222), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 87/173 (50%), Gaps = 13/173 (7%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K D AL L ++ +E D++ YNTII G C +D+A LF K+ +KP+
Sbjct: 225 LCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPD 284
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
T+ LI C GR DA+ + S MLEK ++V ++ LID + K + A +Y+
Sbjct: 285 VFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYD 344
Query: 122 EMCEN-NISPNIAG------------RPTEAMQLYDSMLRNGIMPDGLLLSTL 161
EM ++ + P++ R E M+++ M + G++ + + +TL
Sbjct: 345 EMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTL 397
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 96/173 (55%), Gaps = 13/173 (7%)
Query: 2 LIKECHLDAALKLFGQLT-DRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
+KE L A KL+ ++ + PD++ YNT+I G+C R++E +++F +++ L
Sbjct: 330 FVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 389
Query: 61 NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
N++T+T LI F + D+A M+F +M+ G +++TY+ L+DG + N+++A V+
Sbjct: 390 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVF 449
Query: 121 EEMCENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
E M + ++ +I AG+ + L+ S+ G+ P+ + +T+
Sbjct: 450 EYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 502
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 80/142 (56%), Gaps = 4/142 (2%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
D A +F Q+ G+ PDI+TYN ++ G C+ ++ A+ +FE + +K + +T+T +
Sbjct: 408 DNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTM 467
Query: 69 IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
I+A CK G+++D +F + KG K NVVTY+ ++ G+ + + A ++ EM E+
Sbjct: 468 IEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGP 527
Query: 129 SPNIAGRPTEAMQLYDSMLRNG 150
PN T L + LR+G
Sbjct: 528 LPNSGTYNT----LIRARLRDG 545
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 68/117 (58%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+++ AL +F + R ++ DI+TY T+I C ++++ LF L+ +KPN +T+T
Sbjct: 441 NVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 500
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
++ FC++G ++A +F +M E GP N TY+ LI + + ++ ++ +EM
Sbjct: 501 TMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 80/165 (48%), Gaps = 12/165 (7%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
++++ LD A+ LFG + P I+ ++ ++ +N+ D + L E++ + + N
Sbjct: 50 VLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHN 109
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
T++I I+ FC+ ++ A + KM++ G ++VT + L++G+ + A + +
Sbjct: 110 LYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVD 169
Query: 122 EMCENNISPNIA------------GRPTEAMQLYDSMLRNGIMPD 154
+M E P+ + +EA+ L + M+ G PD
Sbjct: 170 QMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPD 214
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 78/168 (46%), Gaps = 12/168 (7%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
D + L Q+ + G+ ++ TY+ I +C ++L A+ + K+ + P+ +T
Sbjct: 91 FDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNS 150
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
L++ FC R+ +A + +M+E G + + VT++ L+ G F+ A + E M
Sbjct: 151 LLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG 210
Query: 128 ISPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
P++ G P A+ L + M + I D ++ +T+ D
Sbjct: 211 CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIID 258
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K ++ LF L+ +G++P+++TY T++ G+C +EA LF ++ PN
Sbjct: 471 LCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPN 530
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDV 119
S T+ LI A ++G + + +M G + T+ + + + KS D+
Sbjct: 531 SGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHDGRLDKSFLDM 588
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 89/169 (52%), Gaps = 12/169 (7%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
L+ A L Q+ ++G +P TY +I C +D+A LF+++ KPN T+T
Sbjct: 281 RLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYT 340
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
+LID C++G++++A + KM++ +V+TY+ LI+GY K + AF++ M +
Sbjct: 341 VLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKR 400
Query: 127 NISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
PN+ G+P +A+ L ML NG+ PD + + L D
Sbjct: 401 ACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLID 449
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 88/171 (51%), Gaps = 12/171 (7%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A+ L ++ D GL PDI++YN +I G C ++ A +L + C ++P+ +TFT +I+
Sbjct: 425 AVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIIN 484
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI-- 128
AFCK+G+ D A+ ML KG + VT + LIDG K + A + E + + I
Sbjct: 485 AFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILT 544
Query: 129 ---SPNI-------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSS 169
S N+ + E + + + + G++P + +TL D ++S
Sbjct: 545 TPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSG 595
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 85/161 (52%), Gaps = 13/161 (8%)
Query: 7 HLDAALKLFGQLT-DRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITF 65
+L ALK+F ++ + P+ ++Y+ +I G C + RL+EA L +++ +P++ T+
Sbjct: 245 NLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTY 304
Query: 66 TILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE 125
T+LI A C G +D A +F +M+ +G K NV TY+ LIDG + ++ A V +M +
Sbjct: 305 TVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVK 364
Query: 126 NNISPNIA------------GRPTEAMQLYDSMLRNGIMPD 154
+ I P++ GR A +L M + P+
Sbjct: 365 DRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPN 405
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 25 PDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMM 84
P +ITYN +I GYC R+ A +L + KPN TF L++ C+ G+ A +
Sbjct: 369 PSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHL 428
Query: 85 FSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI------------ 132
+ML+ G ++V+Y+ LIDG + +M +A+ + M +I P+
Sbjct: 429 LKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCK 488
Query: 133 AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
G+ A MLR GI D + +TL D
Sbjct: 489 QGKADVASAFLGLMLRKGISLDEVTGTTLID 519
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 82/173 (47%), Gaps = 12/173 (6%)
Query: 1 MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
ML K C + L + G++ GL P ++TY T++ G + + ++ E + P
Sbjct: 555 MLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLP 614
Query: 61 NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
N +TI+I+ C+ GR+++A + S M + G N VTY+ ++ GY + + A +
Sbjct: 615 NVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETV 674
Query: 121 EEMCENNISPNIAGRPTEAMQLYDSMLRNGIMP----DGLLLSTLADYNLQSS 169
M E N ++Y S+L+ ++ D ST++D L+ +
Sbjct: 675 RAMVERGYELN--------DRIYSSLLQGFVLSQKGIDNSEESTVSDIALRET 719
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 81/200 (40%), Gaps = 47/200 (23%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L +E H++ A KL + +EPD +T+ II +C + D A + + +
Sbjct: 451 LCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLD 510
Query: 62 SITFTILIDAFCKEGRMDDATMMFSK------------------MLEKGPKA-------- 95
+T T LID CK G+ DA + ML KG K
Sbjct: 511 EVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLG 570
Query: 96 ---------NVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIA------------G 134
+VVTY+ L+DG +S ++ +F + E M + PN+ G
Sbjct: 571 KINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFG 630
Query: 135 RPTEAMQLYDSMLRNGIMPD 154
R EA +L +M +G+ P+
Sbjct: 631 RVEEAEKLLSAMQDSGVSPN 650
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 17/121 (14%)
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
I + +++A CK G + A M SK+L+ G + + L+ G+ + N++ A V++
Sbjct: 196 IDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDV 255
Query: 123 MCE------NNISPNI-------AGRPTEAMQLYDSMLRNGIMPD----GLLLSTLADYN 165
M + N++S +I GR EA L D M G P +L+ L D
Sbjct: 256 MSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRG 315
Query: 166 L 166
L
Sbjct: 316 L 316
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 89/164 (54%), Gaps = 12/164 (7%)
Query: 3 IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
+KE + A + + ++ R L+PDI+TY+ +I G C +RLDEA ++F + P+
Sbjct: 267 VKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDV 326
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
+T++ILI+ +CK +++ +F +M ++G N VTY+ LI GY ++ + A +++
Sbjct: 327 VTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRR 386
Query: 123 MCENNISPNIA------------GRPTEAMQLYDSMLRNGIMPD 154
M + PNI G+ +A+ + M +NG+ D
Sbjct: 387 MVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDAD 430
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 93/167 (55%), Gaps = 12/167 (7%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
LD A ++FG + +G PD++TY+ +I GYC +++ ++LF +++ + N++T+T
Sbjct: 306 RLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYT 365
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
ILI +C+ G+++ A +F +M+ G N++TY+ L+ G + ++ A + +M +N
Sbjct: 366 ILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKN 425
Query: 127 NISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
+ +I AG +A +Y S+ G+MPD +T+
Sbjct: 426 GMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTM 472
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 82/165 (49%), Gaps = 12/165 (7%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
AL +F Q+ G +P+++ YNTII G C ++D A+ L ++ + P+ +T+ LI
Sbjct: 170 ALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLIS 229
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
C GR DAT M S M ++ +V T++ LID K + A + YEEM ++ P
Sbjct: 230 GLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDP 289
Query: 131 NIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
+I R EA +++ M+ G PD + S L +
Sbjct: 290 DIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILIN 334
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 87/167 (52%), Gaps = 12/167 (7%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
L AL G++ G EP I+T+ +++ G+C +R+ +A+ +F+++ + KPN + +
Sbjct: 131 QLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYN 190
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
+ID CK ++D+A + ++M + G +VVTY+ LI G S A + M +
Sbjct: 191 TIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKR 250
Query: 127 NISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
I P++ GR +EA + Y+ M+R + PD + S L
Sbjct: 251 EIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLL 297
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 81/146 (55%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K ++ +KLF +++ RG+ + +TY +I GYC +L+ A ++F ++ + PN I
Sbjct: 338 KSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNII 397
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+ +L+ C G+++ A ++ + M + G A++VTY+ +I G K+ + A+D+Y +
Sbjct: 398 TYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSL 457
Query: 124 CENNISPNIAGRPTEAMQLYDSMLRN 149
+ P+I T + LY LR
Sbjct: 458 NCQGLMPDIWTYTTMMLGLYKKGLRR 483
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 51/213 (23%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K +D AL L ++ G+ PD++TYN++I G CS R +A ++ +T ++ P+
Sbjct: 196 LCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPD 255
Query: 62 SITFTILIDAFCKEG-----------------------------------RMDDATMMFS 86
TF LIDA KEG R+D+A MF
Sbjct: 256 VFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFG 315
Query: 87 KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI------------AG 134
M+ KG +VVTYS LI+GY KS+ ++ ++ EM + + N AG
Sbjct: 316 FMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAG 375
Query: 135 RPTEAMQLYDSMLRNGIMPD----GLLLSTLAD 163
+ A +++ M+ G+ P+ +LL L D
Sbjct: 376 KLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCD 408
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 87/167 (52%), Gaps = 12/167 (7%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
D + L+ Q+ G+ ++ T N ++ +C ++L A+ K+ + +P+ +TF L
Sbjct: 98 DVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSL 157
Query: 69 IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
++ FC+ R+ DA MF +M+ G K NVV Y+ +IDG KS+ + +A D+ M ++ I
Sbjct: 158 LNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGI 217
Query: 129 SPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
P++ +GR ++A ++ M + I PD + L D
Sbjct: 218 GPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALID 264
>sp|Q9LUJ4|PP248_ARATH Pentatricopeptide repeat-containing protein At3g22670,
mitochondrial OS=Arabidopsis thaliana GN=At3g22670 PE=2
SV=1
Length = 562
Score = 93.2 bits (230), Expect = 8e-19, Method: Composition-based stats.
Identities = 52/180 (28%), Positives = 93/180 (51%), Gaps = 13/180 (7%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L+KE ++ A ++F +L D ++PD T+N +I G+C + D+A + + + + P+
Sbjct: 249 LVKENSIEHAHEVFLKLFDT-IKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPD 307
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T+T ++A+CKEG M +M E G NVVTY+ ++ KS+ + A VYE
Sbjct: 308 VVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYE 367
Query: 122 EMCENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSS 169
+M E+ P+ GR +A ++++ M G+ D L+ +T+ L S
Sbjct: 368 KMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHS 427
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 60/123 (48%), Gaps = 3/123 (2%)
Query: 13 KLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAF 72
++ ++ + G P+++TY ++ ++ EA+ ++EK+ P++ ++ LI
Sbjct: 329 EMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHIL 388
Query: 73 CKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE---NNIS 129
K GR DA +F M +G + +V+ Y+ +I + A + + M + + S
Sbjct: 389 SKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCS 448
Query: 130 PNI 132
PN+
Sbjct: 449 PNV 451
Score = 40.8 bits (94), Expect = 0.005, Method: Composition-based stats.
Identities = 37/177 (20%), Positives = 79/177 (44%), Gaps = 15/177 (8%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K + AL ++ ++ + G PD Y+++I R +A ++FE +T ++ +
Sbjct: 353 LGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRD 412
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKA---NVVTYSCLIDGYFKSQNMKSAFD 118
+ + +I A R + A + +M ++ ++ NV TY+ L+ + MK
Sbjct: 413 VLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGI 472
Query: 119 VYEEMCENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
+ M +N++S ++ +G+ EA ++ +R G++P L D
Sbjct: 473 LLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVD 529
Score = 39.7 bits (91), Expect = 0.011, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 75/167 (44%), Gaps = 13/167 (7%)
Query: 1 MLIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKL------T 54
+L K A ++F +T++G+ D++ YNT+I +R + A++L +++ +
Sbjct: 387 ILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGES 446
Query: 55 CVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMK 114
C PN T+ L+ C + +M ++ M++ +V TY LI G S ++
Sbjct: 447 C---SPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVE 503
Query: 115 SAFDVYEEMCENNISPNIAGRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
A +EE + P R + L D + + + L + +L
Sbjct: 504 EACLFFEEAVRKGMVP----RDSTCKMLVDELEKKNMAEAKLKIQSL 546
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 93.2 bits (230), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 92/166 (55%), Gaps = 13/166 (7%)
Query: 2 LIKECHLDAALKLFGQLTD-RGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKP 60
L KE +A + +L D G PDI+TY+T+I Y + L A+++ ++ +K
Sbjct: 390 LCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKM 449
Query: 61 NSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
N+IT ++DA CKE ++D+A + + ++G + VTY LI G+F+ + ++ A +++
Sbjct: 450 NTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMW 509
Query: 121 EEMCENNISPNIA------------GRPTEAMQLYDSMLRNGIMPD 154
+EM + I+P ++ G+ AM+ +D + +G++PD
Sbjct: 510 DEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPD 555
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 75/129 (58%), Gaps = 4/129 (3%)
Query: 6 CH---LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
CH + A++ F +L + GL PD T+N+II GYC R+++A + + + KP++
Sbjct: 532 CHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDN 591
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEE 122
T IL++ CKEG + A F+ ++E+ + + VTY+ +I + K + +K A+D+ E
Sbjct: 592 YTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSE 650
Query: 123 MCENNISPN 131
M E + P+
Sbjct: 651 MEEKGLEPD 659
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 91/169 (53%), Gaps = 13/169 (7%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTC-VQLKPNSITFT 66
+ +A ++F + G+ ++ T+N ++ GYC +L++A+ + E++ ++ P+++T+
Sbjct: 185 ISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYN 244
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
++ A K+GR+ D + M + G N VTY+ L+ GY K ++K AF + E M +
Sbjct: 245 TILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQT 304
Query: 127 NISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
N+ P++ AG E ++L D+M + PD + +TL D
Sbjct: 305 NVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLID 353
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 69/130 (53%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L KE LD A L RG D +TY T+I G+ ++++A+++++++ V++ P
Sbjct: 461 LCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPT 520
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
TF LI C G+ + A F ++ E G + T++ +I GY K ++ AF+ Y
Sbjct: 521 VSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYN 580
Query: 122 EMCENNISPN 131
E +++ P+
Sbjct: 581 ESIKHSFKPD 590
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 63/128 (49%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K+ L +L + GL P+ +TYN ++ GYC L L EA Q+ E + + P+
Sbjct: 252 KKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLC 311
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+ ILI+ C G M + + M + +VVTY+ LIDG F+ A + E+M
Sbjct: 312 TYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQM 371
Query: 124 CENNISPN 131
+ + N
Sbjct: 372 ENDGVKAN 379
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 82/169 (48%), Gaps = 13/169 (7%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
L A ++ + + PD+ TYN +I G C+ + E ++L + + ++L+P+ +T+
Sbjct: 291 LKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNT 350
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE-N 126
LID + G +A + +M G KAN VT++ + K + ++ +E+ + +
Sbjct: 351 LIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMH 410
Query: 127 NISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
SP+I G + A+++ M + GI + + L+T+ D
Sbjct: 411 GFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILD 459
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Query: 5 ECHLDAALKLFGQL-TDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
E L+ AL + ++ ++ + PD +TYNTI+ RL + +L + L PN +
Sbjct: 217 EGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRV 276
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+ L+ +CK G + +A + M + ++ TY+ LI+G + +M+ ++ + M
Sbjct: 277 TYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAM 336
Query: 124 CENNISPNIA------------GRPTEAMQLYDSMLRNGI 151
+ P++ G EA +L + M +G+
Sbjct: 337 KSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGV 376
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L KE + AL F L + E D +TYNT+I +C +L EA L ++ L+P+
Sbjct: 601 LCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPD 659
Query: 62 SITFTILIDAFCKEGRMDDATMMFSK 87
T+ I ++G++ + + K
Sbjct: 660 RFTYNSFISLLMEDGKLSETDELLKK 685
Score = 38.1 bits (87), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 44/106 (41%), Gaps = 23/106 (21%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCV------- 56
K+ L A L ++ ++GLEPD TYN+ I +L E +L +K +
Sbjct: 637 KDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRD 696
Query: 57 ----------------QLKPNSITFTILIDAFCKEGRMDDATMMFS 86
+L +I ++ +ID C GR+ + + ++
Sbjct: 697 LQVETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLKEHSRSYT 742
Score = 37.7 bits (86), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 60 PNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDG---YFKSQNMKSA 116
P+ F I + A+ EG+ A +F KM+ K N++T + L+ G Y S ++ SA
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 117 FDVYEEMCENNISPNI 132
+V+++M + +S N+
Sbjct: 189 REVFDDMVKIGVSLNV 204
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 88/168 (52%), Gaps = 15/168 (8%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L+KE ++ ++ R ++P++ T+N +I C ++++A + E + PN
Sbjct: 198 LLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPN 257
Query: 62 SITFTILIDAFCK---EGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFD 118
+++ LID +CK G+M A + +M+E N+ T++ LIDG++K N+ +
Sbjct: 258 VVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMK 317
Query: 119 VYEEMCENNISPNI------------AGRPTEAMQLYDSMLRNGIMPD 154
V++EM + ++ PN+ G+ +EA+ + D M+ G+ P+
Sbjct: 318 VFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPN 365
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 91/154 (59%), Gaps = 6/154 (3%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L + +++AA KLF QLT +GL PD++T++ ++ GYC +A L ++++ + LKP
Sbjct: 446 LCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPR 504
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKM-LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVY 120
+T+ I++ +CKEG + AT M ++M E+ + NV +Y+ L+ GY + ++ A +
Sbjct: 505 HLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLL 564
Query: 121 EEMCENNISPNIAGRPTEAMQLYDSMLRNGIMPD 154
EM E + PN R T + + + M+ G +PD
Sbjct: 565 NEMLEKGLVPN---RITYEI-VKEEMVDQGFVPD 594
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 86/163 (52%), Gaps = 13/163 (7%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K+ +L ++K+F ++ D+ ++P++I+YN++I G C+ ++ EA+ + +K+ ++PN I
Sbjct: 308 KDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLI 367
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+ LI+ FCK + +A MF + +G Y+ LID Y K + F + EEM
Sbjct: 368 TYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEM 427
Query: 124 CENNISPNIA------------GRPTEAMQLYDSMLRNGIMPD 154
I P++ G A +L+D + G +PD
Sbjct: 428 EREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPD 469
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 83/158 (52%), Gaps = 15/158 (9%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
DA LK ++ + + P++ T+N +I G+ + L ++++F+++ +KPN I++ L
Sbjct: 281 DAVLK---EMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSL 337
Query: 69 IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
I+ C G++ +A M KM+ G + N++TY+ LI+G+ K+ +K A D++ +
Sbjct: 338 INGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGA 397
Query: 129 SPNIA------------GRPTEAMQLYDSMLRNGIMPD 154
P G+ + L + M R GI+PD
Sbjct: 398 VPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPD 435
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 54/110 (49%)
Query: 28 ITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSK 87
I + ++ Y + +R + + F++ K ++++ L+ A KE R D ++ +
Sbjct: 154 IIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKE 213
Query: 88 MLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIAGRPT 137
M+ + + NV T++ +I+ K+ M A DV E+M SPN+ T
Sbjct: 214 MIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNT 263
>sp|Q6NKW7|PP164_ARATH Pentatricopeptide repeat-containing protein At2g19280
OS=Arabidopsis thaliana GN=At2g19280 PE=2 SV=2
Length = 693
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 84/161 (52%), Gaps = 12/161 (7%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A +F ++ + GL PD + Y T+I GYC+L R D+A Q F L P+ T TILI
Sbjct: 392 ASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIG 451
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
A + G + DA +F M +G K +VVTY+ L+ GY K+ + F++ +EM ISP
Sbjct: 452 ACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISP 511
Query: 131 NIA------------GRPTEAMQLYDSMLRNGIMPDGLLLS 159
++A G EA ++ ++R G +P L +
Sbjct: 512 DVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFT 552
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 86/171 (50%), Gaps = 2/171 (1%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
++ ++D A ++ +L RG P + + +I G+ EA L+ + +++KP+
Sbjct: 523 MVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPD 582
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T + L+ +CK RM+ A ++F+K+L+ G K +VV Y+ LI GY +++ A ++
Sbjct: 583 VVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIG 642
Query: 122 EMCENNISPNIAGRPTEAMQLYDSMLRNGIMPDGLLLSTL--ADYNLQSSG 170
M + + PN + + L N +LL + A ++L S G
Sbjct: 643 LMVQRGMLPNESTHHALVLGLEGKRFVNSETHASMLLEEIIVAKWHLTSGG 693
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 88/163 (53%), Gaps = 12/163 (7%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A +F + GL+ D++TYN ++ GY ++L++ +L +++ + P+ T+ ILI
Sbjct: 462 AESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIH 521
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
+ G +D+A + S+++ +G + + ++ +I G+ K + + AF ++ M + + P
Sbjct: 522 SMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKP 581
Query: 131 NI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
++ A R +A+ L++ +L G+ PD +L +TL
Sbjct: 582 DVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTL 624
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 81/163 (49%), Gaps = 12/163 (7%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K L+ +L ++ G+ PD+ TYN +I +DEA ++ +L P+++
Sbjct: 490 KTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTL 549
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
FT +I F K G +A +++ M + K +VVT S L+ GY K+Q M+ A ++ ++
Sbjct: 550 AFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKL 609
Query: 124 CENNISPNI------------AGRPTEAMQLYDSMLRNGIMPD 154
+ + P++ G +A +L M++ G++P+
Sbjct: 610 LDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPN 652
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 74/167 (44%), Gaps = 16/167 (9%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+ D +L + G+ PDI+ + I C L EA + KL + +S++ +
Sbjct: 286 YFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVS 345
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
+ID FCK G+ ++A + + N+ YS + + +M A +++E+ E
Sbjct: 346 SVIDGFCKVGKPEEAIKLIHSF---RLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFEL 402
Query: 127 NISPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
+ P+ GR +A Q + ++L++G P L ST+
Sbjct: 403 GLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSG-NPPSLTTSTI 448
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 71/168 (42%), Gaps = 15/168 (8%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
L+ A + + RG + + I YCS D+ +L + ++P+ + FT+
Sbjct: 252 LELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTV 311
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
ID CK G + +AT + K+ G + V+ S +IDG+ K + A +
Sbjct: 312 FIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF---R 368
Query: 128 ISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
+ PNI G A ++ + G++PD + +T+ D
Sbjct: 369 LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMID 416
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 89/165 (53%), Gaps = 12/165 (7%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A G++ G EPDI+T+ ++I G+C NR++EA+ + ++ + +KP+ + +T +ID
Sbjct: 126 ASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIID 185
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
+ CK G ++ A +F +M G + +VV Y+ L++G S + A + M + I P
Sbjct: 186 SLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKP 245
Query: 131 NI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
++ G+ +A +LY+ M+R I P+ ++L +
Sbjct: 246 DVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 47/200 (23%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K H++ AL LF Q+ + G+ PD++ Y +++ G C+ R +A L +T ++KP+
Sbjct: 187 LCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPD 246
Query: 62 SITFTILIDAFCKEGR-----------------------------------MDDATMMFS 86
ITF LIDAF KEG+ +D+A MF
Sbjct: 247 VITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFY 306
Query: 87 KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNI------------AG 134
M KG +VV Y+ LI+G+ K + + A ++ EM + ++ N G
Sbjct: 307 LMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVG 366
Query: 135 RPTEAMQLYDSMLRNGIMPD 154
+P A +++ M+ G+ P+
Sbjct: 367 KPNVAQEVFSHMVSRGVPPN 386
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 87/169 (51%), Gaps = 12/169 (7%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
++ A+ + Q+ + G++PD++ Y TII C ++ A+ LF+++ ++P+ + +T
Sbjct: 157 RMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYT 216
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
L++ C GR DA + M ++ K +V+T++ LID + K A ++Y EM
Sbjct: 217 SLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRM 276
Query: 127 NISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
+I+PNI G EA Q++ M G PD + ++L +
Sbjct: 277 SIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLIN 325
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 86/168 (51%), Gaps = 15/168 (8%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
+KE A +L+ ++ + P+I TY ++I G+C +DEA Q+F + P+
Sbjct: 257 FVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPD 316
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+ +T LI+ FCK ++DDA +F +M +KG N +TY+ LI G+ + A +V+
Sbjct: 317 VVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFS 376
Query: 122 EMCENNISPNIA------------GRPTEAMQLYDSMLR---NGIMPD 154
M + PNI G+ +A+ +++ M + +G+ P+
Sbjct: 377 HMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPN 424
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 12/168 (7%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
D + L L G+ D+ T N ++ +C ++ A K+ + +P+ +TFT
Sbjct: 88 FDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTS 147
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
LI+ FC RM++A M ++M+E G K +VV Y+ +ID K+ ++ A ++++M
Sbjct: 148 LINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYG 207
Query: 128 ISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
I P++ +GR +A L M + I PD + + L D
Sbjct: 208 IRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALID 255
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 71/125 (56%), Gaps = 3/125 (2%)
Query: 8 LDAALKLFGQLTDR---GLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSIT 64
+ AL +F + R G+ P+I TYN ++ G C +L++A+ +FE + ++ IT
Sbjct: 403 VKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIIT 462
Query: 65 FTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMC 124
+TI+I CK G++ +A +F + KG K NVVTY+ +I G F+ A ++ +M
Sbjct: 463 YTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMK 522
Query: 125 ENNIS 129
E+ +S
Sbjct: 523 EDGVS 527
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 79/169 (46%), Gaps = 12/169 (7%)
Query: 7 HLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFT 66
+ AL LF + + P II + ++ + + D + L + L + + + T
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 67 ILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCEN 126
+L++ FC+ + A+ KM++ G + ++VT++ LI+G+ M+ A + +M E
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 127 NISPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
I P++ G A+ L+D M GI PD ++ ++L +
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVN 220
>sp|Q9SZ10|PP338_ARATH Pentatricopeptide repeat-containing protein At4g26680,
mitochondrial OS=Arabidopsis thaliana GN=At4g26680 PE=2
SV=1
Length = 521
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 86/159 (54%), Gaps = 12/159 (7%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
L +ALKL + GL+P+++T+NT+I G+C +L EA ++F ++ V + PN++T+
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNT 348
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
LI+ + ++G + A + M+ G + +++TY+ LI G K + A +E+ + N
Sbjct: 349 LINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKEN 408
Query: 128 ISPN------------IAGRPTEAMQLYDSMLRNGIMPD 154
+ PN + +LY SM+R+G P+
Sbjct: 409 LVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPN 447
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 87/172 (50%), Gaps = 12/172 (6%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L+ + +D AL+ + ++ + P+ T N ++ GYC +LD+ ++L + + + +
Sbjct: 213 LLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRAT 272
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+++ LI C++G + A + + M + G + NVVT++ LI G+ ++ ++ A V+
Sbjct: 273 DVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFG 332
Query: 122 EMCENNISPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
EM N++PN G A + Y+ M+ NGI D L + L
Sbjct: 333 EMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNAL 384
Score = 80.5 bits (197), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 12/166 (7%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
LD ++L + G ++YNT+I G+C L A++L + L+PN +TF
Sbjct: 254 LDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNT 313
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
LI FC+ ++ +A+ +F +M N VTY+ LI+GY + + + AF YE+M N
Sbjct: 314 LIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNG 373
Query: 128 ISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
I +I + +A Q + + ++P+ S L
Sbjct: 374 IQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSAL 419
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 58/120 (48%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
+ A + + + G++ DI+TYN +I G C + +A Q ++L L PNS TF+ L
Sbjct: 360 EMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSAL 419
Query: 69 IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
I C D ++ M+ G N T++ L+ + ++++ A V EM +I
Sbjct: 420 IMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSI 479
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 75/163 (46%), Gaps = 12/163 (7%)
Query: 11 ALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILID 70
A F Q+ D G P + + N + R+D A++ + ++ ++ PN T +++
Sbjct: 187 ATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMS 246
Query: 71 AFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISP 130
+C+ G++D + M G +A V+Y+ LI G+ + + SA + M ++ + P
Sbjct: 247 GYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQP 306
Query: 131 NI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
N+ A + EA +++ M + P+ + +TL
Sbjct: 307 NVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 42/90 (46%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K+ A + +L L P+ T++ +I G C D +L++ + PN
Sbjct: 388 LCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPN 447
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEK 91
TF +L+ AFC+ D A+ + +M+ +
Sbjct: 448 EQTFNMLVSAFCRNEDFDGASQVLREMVRR 477
Score = 30.4 bits (67), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 27/145 (18%), Positives = 63/145 (43%), Gaps = 12/145 (8%)
Query: 29 TYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
++++ + L + A F ++ P + + + +GR+D A + +M
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 89 LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCE-----NNISPN--IAGR-----P 136
N T + ++ GY +S + ++ ++M ++S N IAG
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLL 289
Query: 137 TEAMQLYDSMLRNGIMPDGLLLSTL 161
+ A++L + M ++G+ P+ + +TL
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTL 314
>sp|O80958|PP194_ARATH Pentatricopeptide repeat-containing protein At2g39230,
mitochondrial OS=Arabidopsis thaliana GN=LOJ PE=1 SV=1
Length = 867
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 94/174 (54%), Gaps = 12/174 (6%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
+K D+A++ + ++++ G P+++T+ ++I G+C NR+D A+++ ++ ++LK +
Sbjct: 600 FVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLD 659
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+ LID FCK+ M A +FS++ E G NV Y+ LI G+ M +A D+Y+
Sbjct: 660 LPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYK 719
Query: 122 EMCENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
+M + IS ++ G A LY +L GI+PD +L L +
Sbjct: 720 KMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVN 773
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 96/182 (52%), Gaps = 18/182 (9%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K+ + A LF +L + GL P++ YN++I G+ +L ++D A+ L++K+ + +
Sbjct: 672 KKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLF 731
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+T +ID K+G ++ A+ ++S++L+ G + + + L++G K A + EEM
Sbjct: 732 TYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEM 791
Query: 124 CENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADYNLQSSGS 171
+ +++PN+ G EA +L+D ML GI+ D + +NL SG
Sbjct: 792 KKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTV------FNLLVSGR 845
Query: 172 QE 173
E
Sbjct: 846 VE 847
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 78/147 (53%), Gaps = 12/147 (8%)
Query: 29 TYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKM 88
+YN+II G+ + D AV+ + +++ PN +TFT LI+ FCK RMD A M +M
Sbjct: 592 SYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEM 651
Query: 89 LEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIA------------GRP 136
K ++ Y LIDG+ K +MK+A+ ++ E+ E + PN++ G+
Sbjct: 652 KSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKM 711
Query: 137 TEAMQLYDSMLRNGIMPDGLLLSTLAD 163
A+ LY M+ +GI D +T+ D
Sbjct: 712 DAAIDLYKKMVNDGISCDLFTYTTMID 738
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 36/166 (21%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K+ +DAA + +G+EP+++ YN ++ +C + +D A +F ++ L+PN+
Sbjct: 461 KQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNF 520
Query: 64 TFTILIDAF-----------------------------------CKEGRMDDATMMFSKM 88
T++ILID F CK G+ A M +
Sbjct: 521 TYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNL 580
Query: 89 L-EKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIA 133
+ EK + +Y+ +IDG+ K + SA + Y EM EN SPN+
Sbjct: 581 IKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVV 626
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 69/123 (56%), Gaps = 1/123 (0%)
Query: 9 DAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTIL 68
+AAL++F + + + N I +C ++D A + + ++PN + + +
Sbjct: 432 EAALEIFNDSFESWIAHGFMC-NKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNM 490
Query: 69 IDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNI 128
+ A C+ MD A +FS+MLEKG + N TYS LIDG+FK+++ ++A+DV +M +N
Sbjct: 491 MLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNF 550
Query: 129 SPN 131
N
Sbjct: 551 EAN 553
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 70/128 (54%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
+KE +++ A+++ ++ G+ +I +++ GYC N L +A+ LF ++ L P+
Sbjct: 320 FVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPD 379
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+ F+++++ FCK M+ A + +M + V +I G K+++ ++A +++
Sbjct: 380 KVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFN 439
Query: 122 EMCENNIS 129
+ E+ I+
Sbjct: 440 DSFESWIA 447
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/210 (19%), Positives = 89/210 (42%), Gaps = 48/210 (22%)
Query: 3 IKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNS 62
I+ +D A+ FG + DR + P + N ++ N +DEA +++ K+ + + ++
Sbjct: 180 IRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDN 239
Query: 63 ITFTILIDAFCKEGRMDDATMMFSKMLEKGPK---------------------------- 94
+T +L+ A +E + ++A +F +++ +G +
Sbjct: 240 VTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLRE 299
Query: 95 --------ANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPNIAGRPT--------- 137
A+ TY+ +I + K NM+ A V +EM I ++ +
Sbjct: 300 MRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGN 359
Query: 138 ---EAMQLYDSMLRNGIMPDGLLLSTLADY 164
+A+ L++ M G+ PD ++ S + ++
Sbjct: 360 ELGKALDLFNRMEEEGLAPDKVMFSVMVEW 389
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 73/165 (44%), Gaps = 36/165 (21%)
Query: 3 IKECHLDAALKLFGQLTDRGLEPDII---------------------------------- 28
++E + A+K+F ++ RG EPD +
Sbjct: 250 LRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPAS 309
Query: 29 --TYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFS 86
TY ++I + ++EAV++ +++ + + I T L++ +CK + A +F+
Sbjct: 310 QETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFN 369
Query: 87 KMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN 131
+M E+G + V +S +++ + K+ M+ A + Y M I+P+
Sbjct: 370 RMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPS 414
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 58/105 (55%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L+K+ +++ A L+ +L D G+ PD I + ++ G + +A ++ E++ + PN
Sbjct: 740 LLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPN 799
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDG 106
+ ++ +I +EG +++A + +MLEKG + ++ L+ G
Sbjct: 800 VLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
Score = 38.1 bits (87), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 61/148 (41%), Gaps = 31/148 (20%)
Query: 13 KLFG-QLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTILIDA 71
K FG +LT R +N ++ Y R+D AV F + ++ P ++ +
Sbjct: 161 KRFGFELTPRA-------FNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSS 213
Query: 72 FCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENNISPN 131
+ +D+A +++KM+ G + VT L+ + +
Sbjct: 214 LVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRER-------------------- 253
Query: 132 IAGRPTEAMQLYDSMLRNGIMPDGLLLS 159
+P EA++++ ++ G PDGLL S
Sbjct: 254 ---KPEEAVKIFRRVMSRGAEPDGLLFS 278
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 88/170 (51%), Gaps = 12/170 (7%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
++ + A+KL ++ DRG PD++TYN ++ G C RLDEA++ + +PN I
Sbjct: 251 RDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVI 310
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T I++ + C GR DA + + ML KG +VVT++ LI+ + + A D+ E+M
Sbjct: 311 THNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM 370
Query: 124 CENNISPN-IAGRP-----------TEAMQLYDSMLRNGIMPDGLLLSTL 161
++ PN ++ P A++ + M+ G PD + +T+
Sbjct: 371 PQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTM 420
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 90/172 (52%), Gaps = 12/172 (6%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L ++ L A+ + ++ G +P+ ++YN ++ G+C ++D A++ E++ P+
Sbjct: 354 LCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPD 413
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+T+ ++ A CK+G+++DA + +++ KG ++TY+ +IDG K+ A + +
Sbjct: 414 IVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLD 473
Query: 122 EMCENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTL 161
EM ++ P+ G+ EA++ + R GI P+ + +++
Sbjct: 474 EMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSI 525
Score = 83.2 bits (204), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 83/163 (50%), Gaps = 12/163 (7%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
L K+ ++ A+++ QL+ +G P +ITYNT+I G + +A++L +++ LKP+
Sbjct: 424 LCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPD 483
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
+IT++ L+ +EG++D+A F + G + N VT++ ++ G KS+ A D
Sbjct: 484 TITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLV 543
Query: 122 EMCENNISPN------------IAGRPTEAMQLYDSMLRNGIM 152
M PN G EA++L + + G+M
Sbjct: 544 FMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 88/173 (50%), Gaps = 15/173 (8%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
K ++ AL + +++ + PD++TYNTI+ C +L +A+++ +++ P+ I
Sbjct: 184 KAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVI 240
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
T+TILI+A C++ + A + +M ++G +VVTY+ L++G K + A +M
Sbjct: 241 TYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM 300
Query: 124 CENNISPNI------------AGRPTEAMQLYDSMLRNGIMPDGLLLSTLADY 164
+ PN+ GR +A +L MLR G P + + L ++
Sbjct: 301 PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINF 353
Score = 79.7 bits (195), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 83/172 (48%), Gaps = 12/172 (6%)
Query: 4 KECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSI 63
KE LD A+K + G +P++IT+N I+ CS R +A +L + P+ +
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345
Query: 64 TFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEM 123
TF ILI+ C++G + A + KM + G + N ++Y+ L+ G+ K + M A + E M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 124 CENNISPNIA------------GRPTEAMQLYDSMLRNGIMPDGLLLSTLAD 163
P+I G+ +A+++ + + G P + +T+ D
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVID 457
Score = 69.7 bits (169), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 79/174 (45%), Gaps = 15/174 (8%)
Query: 2 LIKECHLDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPN 61
+++ L+ K + G PDII T+I G+C L + +A ++ E L P+
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171
Query: 62 SITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYE 121
IT+ ++I +CK G +++A + +M +VVTY+ ++ S +K A +V +
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 122 EMCENNISPNIAGRPT------------EAMQLYDSMLRNGIMPDGLLLSTLAD 163
M + + P++ AM+L D M G PD + + L +
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 77/161 (47%), Gaps = 12/161 (7%)
Query: 8 LDAALKLFGQLTDRGLEPDIITYNTIICGYCSLNRLDEAVQLFEKLTCVQLKPNSITFTI 67
L A+++ ++ R PD+ITY +I C + + A++L +++ P+ +T+ +
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279
Query: 68 LIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSCLIDGYFKSQNMKSAFDVYEEMCENN 127
L++ CKEGR+D+A + M G + NV+T++ ++ + A + +M
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 128 ISPNIA------------GRPTEAMQLYDSMLRNGIMPDGL 156
SP++ G A+ + + M ++G P+ L
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSL 380
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 66/140 (47%), Gaps = 15/140 (10%)
Query: 43 LDEAVQLFEKLTCVQLKPNSITFTILIDAFCKEGRMDDATMMFSKMLEKGPKANVVTYSC 102
L+E + E + P+ I T LI FC+ G+ A + + G +V+TY+
Sbjct: 118 LEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNV 177
Query: 103 LIDGYFKSQNMKSAFDVYEEMCENNISPNI------------AGRPTEAMQLYDSMLRNG 150
+I GY K+ + +A V + M ++SP++ +G+ +AM++ D ML+
Sbjct: 178 MISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD 234
Query: 151 IMPDGLLLSTLADYNLQSSG 170
PD + + L + + SG
Sbjct: 235 CYPDVITYTILIEATCRDSG 254
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,924,697
Number of Sequences: 539616
Number of extensions: 2318666
Number of successful extensions: 10523
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 432
Number of HSP's successfully gapped in prelim test: 62
Number of HSP's that attempted gapping in prelim test: 5327
Number of HSP's gapped (non-prelim): 3227
length of query: 176
length of database: 191,569,459
effective HSP length: 110
effective length of query: 66
effective length of database: 132,211,699
effective search space: 8725972134
effective search space used: 8725972134
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)