BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030491
(176 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q688X9|DI191_ORYSJ Protein DEHYDRATION-INDUCED 19 OS=Oryza sativa subsp. japonica
GN=DI19-1 PE=2 SV=1
Length = 226
Score = 176 bits (446), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 87/151 (57%), Positives = 107/151 (70%), Gaps = 7/151 (4%)
Query: 1 MDSDFWTSRLAAAKRQYTLQQHHHQSSQIDRLSIDDFEVEDDVRPDFPCPYCYEDFDIAS 60
MDS+ W SRLAAAKR Y Q H DR +++ +++++VRP+F CPYCYED D+ S
Sbjct: 1 MDSEHWISRLAAAKRFYAAQLGH-----ADRAGMEEVDMDEEVRPEFACPYCYEDHDVVS 55
Query: 61 LCSHLEDEHSCESKVTVCPICSVKVARDMLSHITLQHGHLFKLQRRRRLRRVAIPSSQAL 120
LC+HLE+EH E CPICS K+A+DML+HIT+QHG+LFK RRRLRR IP SQAL
Sbjct: 56 LCAHLEEEHPFEPHAAPCPICSDKIAKDMLNHITVQHGYLFK--NRRRLRRFVIPGSQAL 113
Query: 121 SLLGRDLREAHLQVLLGEAEEISKSVVTSTE 151
SLL RDLREAHLQVLLG S + +T
Sbjct: 114 SLLSRDLREAHLQVLLGGGGHRSNNSSNTTN 144
>sp|Q6H6E6|DI194_ORYSJ Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Oryza sativa subsp.
japonica GN=DI19-4 PE=2 SV=1
Length = 245
Score = 174 bits (440), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 92/163 (56%), Positives = 113/163 (69%), Gaps = 13/163 (7%)
Query: 1 MDSDFWTSRLAAAKRQYTLQQHHHQSSQ-------------IDRLSIDDFEVEDDVRPDF 47
MDSD W SRL AAKRQY LQ+ + +DR DD E ED+VRPDF
Sbjct: 1 MDSDHWISRLMAAKRQYALQRAQNHHHATATATATAASHSHLDRYGYDDVEPEDEVRPDF 60
Query: 48 PCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHITLQHGHLFKLQRRR 107
PCPYCYED DI SLC+HLEDEH ESKV CP+CS ++++D+L HITLQH +LF+LQR
Sbjct: 61 PCPYCYEDHDITSLCAHLEDEHPFESKVVACPVCSARISKDLLDHITLQHSYLFRLQRHH 120
Query: 108 RLRRVAIPSSQALSLLGRDLREAHLQVLLGEAEEISKSVVTST 150
RLRRVA+PS+ ALSL GRDL+E +L+VLLG + S + S+
Sbjct: 121 RLRRVAVPSNHALSLGGRDLQETYLKVLLGNSSRSSGTNAASS 163
>sp|Q5QMP3|DI193_ORYSJ Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Oryza sativa subsp.
japonica GN=DI19-3 PE=2 SV=1
Length = 246
Score = 142 bits (358), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/166 (49%), Positives = 98/166 (59%), Gaps = 17/166 (10%)
Query: 1 MDSDFWTSRLAAAKRQYTLQQHHHQSSQIDRLSIDDFEVEDDVR---------------P 45
MDS+ W S LAAAKR Y Q H + + E+EDD P
Sbjct: 1 MDSEHWISSLAAAKRFYAAQLGHVDDMAGIGMEEVEMEMEDDGEGMELELEMQLEEATWP 60
Query: 46 DFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHITLQHGHLFKLQR 105
D CPYCYED DIASLC+HLE++H E + CPIC K+ RDML+HIT+QHG+LFK
Sbjct: 61 DVACPYCYEDHDIASLCAHLEEDHPYEPHTSPCPICFEKITRDMLNHITMQHGYLFK--S 118
Query: 106 RRRLRRVAIPSSQALSLLGRDLREAHLQVLLGEAEEISKSVVTSTE 151
RR+RR IP SQALSLL RDLR+A LQ LLG +S T+T
Sbjct: 119 GRRMRRFDIPESQALSLLSRDLRDAQLQALLGGGHRQRRSNTTATN 164
>sp|Q6NM26|DI196_ARATH Protein DEHYDRATION-INDUCED 19 homolog 6 OS=Arabidopsis thaliana
GN=DI19-6 PE=1 SV=1
Length = 222
Score = 124 bits (311), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 89/136 (65%), Gaps = 5/136 (3%)
Query: 1 MDSDFWTSRLAAAKRQYTLQQHHHQSSQIDRLSIDDFEVEDDVRPDFPCPYCYEDFDIAS 60
MDSD W+ RLA+A R+Y L S + L ++ E EDD R ++ CP+C + FDI S
Sbjct: 1 MDSDSWSDRLASASRRYQLD---FLSRSDNFLGFEEIEGEDDFREEYACPFCSDYFDIVS 57
Query: 61 LCSHLEDEHSCESKVTVCPICSVKVARDMLSHITLQHGHLFKLQRRRRLRRVAIPSSQAL 120
LC H++++H ++K VCPIC+VKV+ DM++HITLQH ++FK+ R+R+ RR S L
Sbjct: 58 LCCHIDEDHPMDAKNGVCPICAVKVSSDMIAHITLQHANMFKVTRKRKSRRGGAQS--ML 115
Query: 121 SLLGRDLREAHLQVLL 136
S+L R+ + + Q L
Sbjct: 116 SILKREFPDGNFQSLF 131
>sp|Q84J70|DI193_ARATH Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Arabidopsis thaliana
GN=DI19-3 PE=1 SV=1
Length = 223
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 88/137 (64%), Gaps = 5/137 (3%)
Query: 1 MDSDFWTSRLAAAKRQYTLQQHHHQSSQIDRLSIDDFEVEDDVRPDFPCPYCYEDFDIAS 60
MDSD W+ RLA+A R+Y L S L ++ + E++ R +F CP+C + FDI S
Sbjct: 1 MDSDSWSDRLASATRRYQLA---FPSRSDTFLGFEEIDGEEEFREEFACPFCSDYFDIVS 57
Query: 61 LCSHLEDEHSCESKVTVCPICSVKVARDMLSHITLQHGHLFKLQRRRRLRRVAIPSSQAL 120
LC H++++H E+K VCP+C+V+V DM++HITLQH ++FK+ R+R+ RR S L
Sbjct: 58 LCCHIDEDHPMEAKNGVCPVCAVRVGVDMVAHITLQHANIFKMHRKRKPRRGG--SYSTL 115
Query: 121 SLLGRDLREAHLQVLLG 137
S+L R+ + + Q L G
Sbjct: 116 SILRREFPDGNFQSLFG 132
>sp|Q39083|DI191_ARATH Protein DEHYDRATION-INDUCED 19 OS=Arabidopsis thaliana GN=DI19-1
PE=1 SV=2
Length = 206
Score = 119 bits (298), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 89/145 (61%), Gaps = 14/145 (9%)
Query: 32 LSIDDFEVEDDVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLS 91
+ ++ + +DD + +F CP+C E +DI LC H++DEH+ ESK VCP+CS+KV D+++
Sbjct: 20 MGFEEIDGDDDFQEEFACPFCAESYDIIGLCCHIDDEHTLESKNAVCPVCSLKVGVDIVA 79
Query: 92 HITLQHGHLFKLQRRRRLRRVAIPSSQALSLLGRDLREAHLQVLLGEAEEISKSVVTSTE 151
HITL HG LFKLQR+R+ R+ S+ LSLL ++LRE LQ LLG TS
Sbjct: 80 HITLHHGSLFKLQRKRKSRKSGTNST--LSLLRKELREGDLQRLLG---------FTSRN 128
Query: 152 DTSAKSAAPTHMWKTRYCFLAPMHT 176
+ A S P + + F++P +
Sbjct: 129 GSVASSVTPDPLLSS---FISPTRS 150
>sp|Q9FJ17|DI197_ARATH Protein DEHYDRATION-INDUCED 19 homolog 7 OS=Arabidopsis thaliana
GN=DI19-7 PE=1 SV=2
Length = 211
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 80/118 (67%), Gaps = 2/118 (1%)
Query: 32 LSIDDFEVEDDVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLS 91
L + D E EDD++ +F CP+C ++FDI LC H++ H E+K VCP+C+ KV D++
Sbjct: 28 LYLGDVEGEDDLKAEFMCPFCADEFDIVGLCCHIDVNHPVEAKNGVCPVCTKKVGLDIVG 87
Query: 92 HITLQHGHLFKLQRRRRLRRVAIPSSQALSLLGRDLREAHLQVLLGEAEEISKSVVTS 149
HIT QHG++FK+QRRRRLR+ SS L+ L ++LREA+LQ L G + I S + S
Sbjct: 88 HITTQHGNVFKVQRRRRLRKGGY-SSTYLT-LKKELREANLQSLGGSSTFIPSSNIDS 143
>sp|Q5W794|DI192_ORYSJ Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Oryza sativa subsp.
japonica GN=DI19-2 PE=2 SV=2
Length = 233
Score = 106 bits (265), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 69/98 (70%)
Query: 47 FPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHITLQHGHLFKLQRR 106
+ CP+C EDFD + C H++DEH+ E+K VCPIC+ +V D++ H+T+QHG FK+QRR
Sbjct: 54 YNCPFCGEDFDFVAFCCHVDDEHAVEAKSGVCPICATRVGVDLIGHLTMQHGSYFKMQRR 113
Query: 107 RRLRRVAIPSSQALSLLGRDLREAHLQVLLGEAEEISK 144
RR+R+++ S LSLL +DLR+ LQ LG + +S
Sbjct: 114 RRVRKISSGSHSLLSLLRKDLRDGSLQSFLGGSSYVSN 151
>sp|Q8VXU6|DI194_ARATH Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Arabidopsis thaliana
GN=DI19-4 PE=1 SV=1
Length = 224
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 72/102 (70%), Gaps = 2/102 (1%)
Query: 35 DDFEVEDDVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHIT 94
+D E EDD++ +F CP+C EDFDI LC H+++EH E+K VCP+C+ +V D++ HIT
Sbjct: 35 EDLEGEDDLKAEFICPFCAEDFDIVGLCCHIDEEHPVEAKNGVCPVCTKRVGLDIVGHIT 94
Query: 95 LQHGHLFKLQRRRRLRRVAIPSSQALSLLGRDLREAHLQVLL 136
QH + FK+QRRRRLRR S+ L ++LREA+LQ LL
Sbjct: 95 TQHANFFKVQRRRRLRRGGYSSTYL--ALKKELREANLQSLL 134
>sp|O04259|DI195_ARATH Protein DEHYDRATION-INDUCED 19 homolog 5 OS=Arabidopsis thaliana
GN=DI19-5 PE=1 SV=2
Length = 214
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 47/67 (70%)
Query: 36 DFEVEDDVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHITL 95
+FE +D++ D+PCP+C +D+D+ LC H+++EH ++ +CP+CS +V M+ HIT
Sbjct: 32 EFEDDDEMAVDYPCPFCSDDYDLVELCHHIDEEHQLDANNGICPVCSRRVKMHMVDHITT 91
Query: 96 QHGHLFK 102
QH +FK
Sbjct: 92 QHRDVFK 98
>sp|Q8GWK1|DI192_ARATH Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Arabidopsis thaliana
GN=DI19-2 PE=1 SV=1
Length = 221
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 47/74 (63%)
Query: 38 EVEDDVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHITLQH 97
EV+DD+ ++PCP+C D+D+ LC H+++EH E+ +CP+CS +V M+ HIT H
Sbjct: 38 EVDDDIAVEYPCPFCASDYDLVELCHHIDEEHRHEANNGICPVCSKRVKMHMVDHITSHH 97
Query: 98 GHLFKLQRRRRLRR 111
+ K +++ R
Sbjct: 98 RDVLKSEQKEMSYR 111
>sp|Q5JME8|DI195_ORYSJ Protein DEHYDRATION-INDUCED 19 homolog 5 OS=Oryza sativa subsp.
japonica GN=DI19-5 PE=2 SV=1
Length = 202
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 43/62 (69%)
Query: 47 FPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHITLQHGHLFKLQRR 106
FPCP+CY + ++ +C+HL++EH +++ VCP+C+ + RDM +H +QH HL K ++
Sbjct: 37 FPCPFCYIEVEVPFICNHLQEEHCFDTRNAVCPLCADNIGRDMGAHFRVQHSHLLKRRKP 96
Query: 107 RR 108
R
Sbjct: 97 SR 98
>sp|Q7XBA5|DI196_ORYSJ Protein DEHYDRATION-INDUCED 19 homolog 6 OS=Oryza sativa subsp.
japonica GN=DI19-6 PE=2 SV=1
Length = 208
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Query: 47 FPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHITLQHGHLFKLQRR 106
PCP+CY + ++ LC HL++EH + K VCPIC+ + +D H +QH HL L+RR
Sbjct: 37 IPCPFCYIEVEVHFLCDHLQEEHCFDMKNAVCPICADNLDKDTDEHFRVQHSHL--LKRR 94
Query: 107 R 107
+
Sbjct: 95 K 95
>sp|Q4U5R4|RN114_BOVIN RING finger protein 114 OS=Bos taurus GN=RNF114 PE=2 SV=1
Length = 230
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 47 FPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICS 82
FPCPYC E +FD L H + HS ++K VCPIC+
Sbjct: 143 FPCPYCPEKNFDQEGLVEHCKLSHSTDTKSVVCPICA 179
>sp|Q6J2U6|RN114_RAT RING finger protein 114 OS=Rattus norvegicus GN=Rnf114 PE=2 SV=1
Length = 229
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 47 FPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICS 82
FPCPYC E +FD L H + HS ++K VCPIC+
Sbjct: 142 FPCPYCPEKNFDQEGLVEHCKLTHSTDTKSVVCPICA 178
>sp|Q9ET26|RN114_MOUSE RING finger protein 114 OS=Mus musculus GN=Rnf114 PE=2 SV=2
Length = 229
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 47 FPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICS 82
FPCPYC E +FD L H + HS ++K VCPIC+
Sbjct: 142 FPCPYCPEKNFDQEGLVEHCKLTHSTDTKSVVCPICA 178
>sp|Q6J1I8|RN114_PIG RING finger protein 114 OS=Sus scrofa GN=RNF114 PE=2 SV=1
Length = 228
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 47 FPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICS 82
FPCPYC E +FD L H + HS ++K VCPIC+
Sbjct: 141 FPCPYCPEKNFDQEGLVEHCKLVHSTDTKSVVCPICA 177
>sp|Q6J212|RN114_PANTR RING finger protein 114 OS=Pan troglodytes GN=RNF114 PE=2 SV=1
Length = 228
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 44 RPDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICS 82
R FPCPYC E +FD L H + HS ++K VCPIC+
Sbjct: 138 RYTFPCPYCPEKNFDQEGLVEHCKLFHSTDTKSVVCPICA 177
>sp|Q9Y508|RN114_HUMAN RING finger protein 114 OS=Homo sapiens GN=RNF114 PE=1 SV=1
Length = 228
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 44 RPDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICS 82
R FPCPYC E +FD L H + HS ++K VCPIC+
Sbjct: 138 RYTFPCPYCPEKNFDQEGLVEHCKLFHSTDTKSVVCPICA 177
>sp|Q6GPB6|KCMF1_XENLA E3 ubiquitin-protein ligase KCMF1 OS=Xenopus laevis GN=kcmf1 PE=2
SV=1
Length = 381
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Query: 47 FPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSV-------KVARDMLSHITLQH 97
F CPYC + + SL H+ EH+ S +CPIC+ V D +H+TL+H
Sbjct: 78 FTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGDPNHVTDDFAAHLTLEH 136
>sp|Q9P0J7|KCMF1_HUMAN E3 ubiquitin-protein ligase KCMF1 OS=Homo sapiens GN=KCMF1 PE=1
SV=2
Length = 381
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Query: 47 FPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSV-------KVARDMLSHITLQH 97
F CPYC + + SL H+ EH+ S +CPIC+ V D +H+TL+H
Sbjct: 78 FTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGDPNHVTDDFAAHLTLEH 136
>sp|Q1LZE1|KCMF1_BOVIN E3 ubiquitin-protein ligase KCMF1 OS=Bos taurus GN=KCMF1 PE=2 SV=1
Length = 381
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Query: 47 FPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSV-------KVARDMLSHITLQH 97
F CPYC + + SL H+ EH+ S +CPIC+ V D +H+TL+H
Sbjct: 78 FTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGDPNHVTDDFAAHLTLEH 136
>sp|Q80UY2|KCMF1_MOUSE E3 ubiquitin-protein ligase KCMF1 OS=Mus musculus GN=Kcmf1 PE=2
SV=1
Length = 381
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Query: 47 FPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSV-------KVARDMLSHITLQH 97
F CPYC + + SL H+ EH+ S +CPIC+ V D +H+TL+H
Sbjct: 78 FTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGDPNHVTDDFAAHLTLEH 136
>sp|Q7T321|KCMF1_DANRE E3 ubiquitin-protein ligase KCMF1 OS=Danio rerio GN=kcmf1 PE=2 SV=1
Length = 383
Score = 39.3 bits (90), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Query: 47 FPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSV-------KVARDMLSHITLQH 97
F CPYC + + SL H+ EH+ S +CPIC+ V D +H+TL+H
Sbjct: 78 FTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGDPNHVTDDFAAHLTLEH 136
>sp|Q8K083|ZN536_MOUSE Zinc finger protein 536 OS=Mus musculus GN=Znf536 PE=2 SV=1
Length = 1302
Score = 34.3 bits (77), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 38 EVEDDVRPD--FPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHITL 95
++EDD R + +PCP C + F S+ S H+ E K CP C + A+ I L
Sbjct: 119 DIEDDARKNRKYPCPLCGKRFRFNSILSLHMRTHTGE-KPFKCPYCDHRAAQKGNLKIHL 177
Query: 96 QHGHLFKLQR-RRRLR 110
+ L L + R R+R
Sbjct: 178 RTHKLGNLGKGRGRVR 193
>sp|O15090|ZN536_HUMAN Zinc finger protein 536 OS=Homo sapiens GN=ZNF536 PE=1 SV=3
Length = 1300
Score = 33.9 bits (76), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 38 EVEDDVRPD--FPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHITL 95
++EDD R + +PCP C + F S+ S H+ E K CP C + A+ I L
Sbjct: 119 DIEDDARKNRKYPCPLCGKRFRFNSILSLHMRTHTGE-KPFKCPYCDHRAAQKGNLKIHL 177
Query: 96 QHGHLFKLQR-RRRLR 110
+ L L + R R+R
Sbjct: 178 RTHKLGNLGKGRGRVR 193
>sp|Q1L721|RN138_XENLA E3 ubiquitin-protein ligase RNF138 OS=Xenopus laevis GN=rnf138 PE=1
SV=1
Length = 222
Score = 32.3 bits (72), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 8/61 (13%)
Query: 45 PDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICS-------VKVARDMLSHITLQ 96
P + CP C E + + SL H + H E VCPIC+ ++ ++++H+ +
Sbjct: 132 PKYKCPLCSEHNLNQRSLLEHCNNVHYYEEVEMVCPICATLPWGDPIQTTGNVIAHLNAR 191
Query: 97 H 97
H
Sbjct: 192 H 192
>sp|A6VDE4|Y5760_PSEA7 UPF0061 protein PSPA7_5760 OS=Pseudomonas aeruginosa (strain PA7)
GN=PSPA7_5760 PE=3 SV=1
Length = 486
Score = 30.8 bits (68), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 16/87 (18%)
Query: 50 PYCY-EDFDIASLCSHLED--EHSCESKVTVC------------PICSVKVARDMLS-HI 93
PY + +DFD +C+H +D +S ++V + P+ V R L +
Sbjct: 265 PYAFLDDFDANHICNHSDDSGRYSFSNQVPIAHWNLAALAQALTPLVEVDELRASLELFL 324
Query: 94 TLQHGHLFKLQRRRRLRRVAIPSSQAL 120
L H L RRR VA+ + QAL
Sbjct: 325 PLYQAHYLDLMRRRLGLGVAVENDQAL 351
>sp|Q9H1K0|RBNS5_HUMAN Rabenosyn-5 OS=Homo sapiens GN=ZFYVE20 PE=1 SV=2
Length = 784
Score = 30.8 bits (68), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 33 SIDDFEVEDDVRPDFPCPYCYEDFD-IASLCSHLEDEHSCESKVTVCPICSV----KVAR 87
S+DD +VR F CP C +D L SH E+EHS E + I S+ K A+
Sbjct: 3 SLDD---PGEVREGFLCPLCLKDLQSFYQLHSHYEEEHSGEDRDVKGQIKSLVQKAKKAK 59
Query: 88 DML 90
D L
Sbjct: 60 DRL 62
>sp|O16999|ZPR1_CAEEL Zinc finger protein ZPR1 homolog OS=Caenorhabditis elegans
GN=W03F9.1 PE=3 SV=2
Length = 455
Score = 30.8 bits (68), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
Query: 31 RLSIDDFEVEDDVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDML 90
LS DD+E V D CP C ED + +C+ + + CP C K
Sbjct: 11 NLSADDYEAAPIVV-DSVCPVCEEDGETRIMCTSIPYYRAVILMSFECPHCGHKNNEIQS 69
Query: 91 SHITLQHGHL--FKLQRRRRLRRVAIPSSQA 119
+HG L ++Q+ LRR + S A
Sbjct: 70 GEAVQEHGTLIVLRVQKPEDLRRQLVKSEYA 100
>sp|O60315|ZEB2_HUMAN Zinc finger E-box-binding homeobox 2 OS=Homo sapiens GN=ZEB2 PE=1
SV=1
Length = 1214
Score = 30.4 bits (67), Expect = 5.6, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 17/88 (19%)
Query: 40 EDDVRPDFP--------CPYCYEDFD-IASLCSHLEDEHSCESKVTVCPICSVKVA---- 86
E+D+ P P CPYC + + SL H++ H + CP+CS A
Sbjct: 196 ENDLPPGTPDAFAQLLTCPYCDRGYKRLTSLKEHIKYRHEKNEENFSCPLCSYTFAYRTQ 255
Query: 87 --RDMLSHI--TLQHGHLFKLQRRRRLR 110
R M++H T QH L + R+ +
Sbjct: 256 LERHMVTHKPGTDQHQMLTQGAGNRKFK 283
>sp|Q6N043|Z280D_HUMAN Zinc finger protein 280D OS=Homo sapiens GN=ZNF280D PE=1 SV=3
Length = 979
Score = 30.4 bits (67), Expect = 6.7, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Query: 49 CPYCYEDFDIA-SLCSHLEDEHSCESKVTVCPICSVKVARDMLSHITLQH 97
C +CY F L H+E H+ T+C IC + + H+ LQH
Sbjct: 360 CQHCYRQFPTPFQLQCHIESTHTPHEFSTICKICELSFETE---HVLLQH 406
>sp|Q9R0G7|ZEB2_MOUSE Zinc finger E-box-binding homeobox 2 OS=Mus musculus GN=Zeb2 PE=1
SV=2
Length = 1215
Score = 30.4 bits (67), Expect = 6.8, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 17/88 (19%)
Query: 40 EDDVRPDFP--------CPYCYEDFD-IASLCSHLEDEHSCESKVTVCPICSVKVA---- 86
E+D+ P P CPYC + + SL H++ H + CP+CS A
Sbjct: 196 ENDLPPGTPDAFAQLLTCPYCDRGYKRLTSLKEHIKYRHEKNEENFSCPLCSYTFAYRTQ 255
Query: 87 --RDMLSHI--TLQHGHLFKLQRRRRLR 110
R M++H T QH L + R+ +
Sbjct: 256 LERHMVTHKPGTDQHQMLTQGAGNRKFK 283
>sp|Q96A37|RN166_HUMAN RING finger protein 166 OS=Homo sapiens GN=RNF166 PE=2 SV=1
Length = 237
Score = 30.0 bits (66), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 44 RPDFPCPYC-YEDFDIASLCSHLEDEHSCESKVTVCPICS 82
R F CPYC + D L H + H + VCPICS
Sbjct: 147 RSTFACPYCGARNLDQQELVKHCVESHRSDPNRVVCPICS 186
>sp|Q6J1I7|RN166_RAT RING finger protein 166 OS=Rattus norvegicus GN=Rnf166 PE=2 SV=1
Length = 237
Score = 30.0 bits (66), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 44 RPDFPCPYC-YEDFDIASLCSHLEDEHSCESKVTVCPICSV 83
R F CPYC + D L H + H + VCPICS
Sbjct: 147 RSTFACPYCGARNLDQQELVKHCVESHRSDPNRVVCPICSA 187
>sp|Q3U9F6|RN166_MOUSE RING finger protein 166 OS=Mus musculus GN=Rnf166 PE=2 SV=1
Length = 237
Score = 30.0 bits (66), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 44 RPDFPCPYC-YEDFDIASLCSHLEDEHSCESKVTVCPICSV 83
R F CPYC + D L H + H + VCPICS
Sbjct: 147 RSTFACPYCGARNLDQQELVKHCVESHRSDPNRVVCPICSA 187
>sp|Q09452|YQ23_CAEEL Putative zinc finger protein C09F5.3 OS=Caenorhabditis elegans
GN=C09F5.3 PE=4 SV=2
Length = 359
Score = 29.6 bits (65), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Query: 49 CPYCYEDF-DIASLCSHLEDE-HSCESKVTVCPICSVKVA----RDMLSHITLQHGHLFK 102
C C + F D A H++ S S++ CPIC V + L H+T QH +
Sbjct: 121 CQQCEDTFEDFAQFAIHMKSHLSSVTSQLFFCPICPVGTPFRDKKSQLEHLTTQHLQIQV 180
Query: 103 LQRRRRLRRVAIPSSQALSL 122
Q + A PS QA S+
Sbjct: 181 TQHICSICDSAFPSPQAQSV 200
>sp|Q6P3P1|TAXB1_XENTR Tax1-binding protein 1 homolog OS=Xenopus tropicalis GN=tax1bp1
PE=2 SV=1
Length = 841
Score = 29.6 bits (65), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 55 DFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHITLQHGHLFKLQRRRRLRRVAI 114
D + +L SH ++E K+ +C K+ +++L + + + F Q+ R+L
Sbjct: 313 DTNKENLISHYKEELG---KLQICLADKEKMNKELLQNSSNKEDIAFLKQQLRKLEDQHQ 369
Query: 115 PSSQALSLLGRDLREA 130
S Q +SL+ R+L EA
Sbjct: 370 ASRQEVSLMSRELSEA 385
>sp|Q3KPU8|RN166_XENLA RING finger protein 166 OS=Xenopus laevis GN=rnf166 PE=2 SV=1
Length = 241
Score = 29.6 bits (65), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 44 RPDFPCPYC-YEDFDIASLCSHLEDEHSCESKVTVCPICSV 83
R F CPYC + D L H + H + VCPICS
Sbjct: 151 RSTFVCPYCGARNLDQQELVKHCMENHRNDPNKVVCPICSA 191
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.132 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,480,329
Number of Sequences: 539616
Number of extensions: 2200633
Number of successful extensions: 6143
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 6079
Number of HSP's gapped (non-prelim): 89
length of query: 176
length of database: 191,569,459
effective HSP length: 110
effective length of query: 66
effective length of database: 132,211,699
effective search space: 8725972134
effective search space used: 8725972134
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 57 (26.6 bits)