Query 030491
Match_columns 176
No_of_seqs 128 out of 184
Neff 4.0
Searched_HMMs 29240
Date Mon Mar 25 23:41:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030491.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030491hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2drp_A Protein (tramtrack DNA- 97.8 2.4E-05 8.1E-10 49.9 4.9 54 45-98 9-65 (66)
2 2ct1_A Transcriptional repress 97.8 3.1E-05 1.1E-09 51.1 5.0 54 46-99 15-71 (77)
3 3uk3_C Zinc finger protein 217 97.4 0.00028 9.7E-09 43.4 5.3 51 46-98 4-57 (57)
4 2yt9_A Zinc finger-containing 97.3 0.00037 1.3E-08 46.8 5.0 52 46-97 35-89 (95)
5 1x5w_A Zinc finger protein 64, 97.2 0.0004 1.4E-08 44.8 4.6 53 45-99 8-63 (70)
6 1x6h_A Transcriptional repress 97.2 0.00049 1.7E-08 45.3 4.8 54 46-99 15-73 (86)
7 2eod_A TNF receptor-associated 97.1 0.00065 2.2E-08 43.7 4.9 48 45-95 9-59 (66)
8 1bbo_A Human enhancer-binding 97.1 0.001 3.5E-08 40.8 5.2 50 47-98 2-54 (57)
9 1x6e_A Zinc finger protein 24; 97.0 0.00082 2.8E-08 43.6 4.4 51 46-98 14-67 (72)
10 2adr_A ADR1; transcription reg 97.0 0.0015 5.1E-08 40.6 5.1 51 46-98 2-55 (60)
11 2ctd_A Zinc finger protein 512 96.9 0.00094 3.2E-08 47.1 4.5 50 46-98 34-87 (96)
12 2gqj_A Zinc finger protein KIA 96.9 0.0003 1E-08 48.9 1.7 53 46-99 24-80 (98)
13 2lce_A B-cell lymphoma 6 prote 96.9 0.0026 8.8E-08 41.3 6.0 52 45-98 16-70 (74)
14 2cot_A Zinc finger protein 435 96.8 0.0021 7.2E-08 42.1 5.2 52 45-98 17-71 (77)
15 2d9h_A Zinc finger protein 692 96.8 0.0011 3.7E-08 43.5 3.6 54 46-99 7-64 (78)
16 2kmk_A Zinc finger protein GFI 96.8 0.0016 5.4E-08 42.2 4.4 50 46-97 29-81 (82)
17 2csh_A Zinc finger protein 297 96.8 0.0016 5.4E-08 45.0 4.4 52 46-99 37-91 (110)
18 1a1h_A QGSR zinc finger peptid 96.7 0.0022 7.6E-08 42.4 4.9 50 46-97 34-86 (90)
19 2dlq_A GLI-kruppel family memb 96.7 0.0026 9E-08 44.1 5.4 53 46-98 35-91 (124)
20 2dmd_A Zinc finger protein 64, 96.7 0.0021 7E-08 43.2 4.6 47 47-95 9-58 (96)
21 2rpc_A Zinc finger protein ZIC 96.6 0.0027 9.2E-08 46.3 5.2 56 43-98 22-87 (155)
22 2dlq_A GLI-kruppel family memb 96.6 0.0026 8.8E-08 44.2 4.7 53 45-99 65-120 (124)
23 2wbt_A B-129; zinc finger; 2.7 96.6 0.0024 8.1E-08 45.5 4.5 50 46-99 74-126 (129)
24 2kmk_A Zinc finger protein GFI 96.6 0.0029 1E-07 40.9 4.4 50 47-98 2-54 (82)
25 2ej4_A Zinc finger protein ZIC 96.4 0.0058 2E-07 40.9 5.5 54 45-98 24-87 (95)
26 2lv2_A Insulinoma-associated p 96.4 0.0042 1.4E-07 43.8 4.9 53 45-99 27-82 (85)
27 2dmd_A Zinc finger protein 64, 96.4 0.0044 1.5E-07 41.5 4.7 53 45-99 35-90 (96)
28 2ee8_A Protein ODD-skipped-rel 96.4 0.0045 1.5E-07 42.3 4.8 52 45-98 16-70 (106)
29 1llm_C Chimera of ZIF23-GCN4; 96.3 0.0037 1.3E-07 41.8 3.9 55 46-102 3-60 (88)
30 2d9k_A FLN29 gene product; zin 96.3 0.0013 4.5E-08 44.6 1.6 51 45-98 16-67 (75)
31 4gzn_C ZFP-57, zinc finger pro 96.2 0.0054 1.9E-07 40.5 4.3 49 46-96 4-55 (60)
32 2ee8_A Protein ODD-skipped-rel 96.2 0.015 5.1E-07 39.6 6.7 53 45-99 44-99 (106)
33 2yt9_A Zinc finger-containing 96.2 0.0048 1.6E-07 41.2 3.9 53 45-99 6-61 (95)
34 1wjp_A Zinc finger protein 295 96.1 0.0065 2.2E-07 41.9 4.2 45 46-94 16-63 (107)
35 1llm_C Chimera of ZIF23-GCN4; 96.0 0.0011 3.8E-08 44.5 0.1 51 46-99 31-84 (88)
36 2epx_A Zinc finger protein 28 95.8 0.008 2.7E-07 35.4 3.1 35 46-81 12-47 (47)
37 2dlk_A Novel protein; ZF-C2H2 95.7 0.016 5.5E-07 37.4 4.7 52 46-98 7-65 (79)
38 2ytn_A Zinc finger protein 347 95.7 0.012 4.1E-07 34.6 3.7 34 46-81 12-46 (46)
39 1ubd_C Protein (YY1 zinc finge 95.6 0.018 6.1E-07 40.2 5.0 49 46-97 5-58 (124)
40 2eq0_A Zinc finger protein 347 95.6 0.0089 3E-07 35.2 2.9 34 46-81 12-46 (46)
41 2em0_A Zinc finger protein 224 95.6 0.012 4.3E-07 34.6 3.5 34 46-81 12-46 (46)
42 2ema_A Zinc finger protein 347 95.5 0.01 3.4E-07 35.0 2.9 34 46-81 12-46 (46)
43 2ebt_A Krueppel-like factor 5; 95.5 0.02 6.8E-07 38.4 4.8 55 43-99 12-73 (100)
44 2eop_A Zinc finger protein 268 95.5 0.013 4.3E-07 34.4 3.3 34 46-81 12-46 (46)
45 1a1h_A QGSR zinc finger peptid 95.5 0.019 6.5E-07 37.7 4.5 51 46-98 4-59 (90)
46 2lt7_A Transcriptional regulat 95.5 0.013 4.4E-07 43.7 4.0 48 46-95 22-72 (133)
47 1f2i_G Fusion of N-terminal 17 95.4 0.017 5.9E-07 37.0 4.0 49 45-95 18-71 (73)
48 2eov_A Zinc finger protein 484 95.4 0.015 5E-07 34.1 3.4 34 46-81 12-46 (46)
49 2ghf_A ZHX1, zinc fingers and 95.4 0.018 6.1E-07 41.7 4.4 52 46-97 18-74 (102)
50 2i13_A AART; DNA binding, zinc 95.4 0.016 5.5E-07 43.6 4.3 51 46-98 105-158 (190)
51 2emy_A Zinc finger protein 268 95.4 0.012 4E-07 34.7 2.8 34 46-81 12-46 (46)
52 2eoq_A Zinc finger protein 224 95.4 0.016 5.5E-07 34.1 3.4 34 46-81 12-46 (46)
53 1wjp_A Zinc finger protein 295 95.3 0.013 4.3E-07 40.4 3.4 50 46-98 42-94 (107)
54 2gli_A Protein (five-finger GL 95.3 0.0088 3E-07 43.3 2.6 51 46-98 67-124 (155)
55 2ene_A Zinc finger protein 347 95.3 0.013 4.4E-07 34.5 2.8 34 46-81 12-46 (46)
56 2j7j_A Transcription factor II 95.2 0.024 8.1E-07 36.6 4.2 50 47-98 2-58 (85)
57 2ep2_A Zinc finger protein 484 95.2 0.016 5.4E-07 34.1 3.0 34 46-81 12-46 (46)
58 2eps_A POZ-, at HOOK-, and zin 95.1 0.016 5.6E-07 35.7 3.1 38 46-84 12-50 (54)
59 2ytq_A Zinc finger protein 268 95.1 0.019 6.5E-07 33.8 3.3 34 46-81 12-46 (46)
60 2el4_A Zinc finger protein 268 95.1 0.016 5.4E-07 34.0 2.8 34 46-81 12-46 (46)
61 2ytk_A Zinc finger protein 347 95.1 0.017 5.7E-07 34.0 2.9 34 46-81 12-46 (46)
62 2enc_A Zinc finger protein 224 95.1 0.017 6E-07 33.9 3.0 34 46-81 12-46 (46)
63 2ytm_A Zinc finger protein 28 95.0 0.016 5.3E-07 34.3 2.7 34 46-81 12-46 (46)
64 2ytj_A Zinc finger protein 484 95.0 0.019 6.5E-07 33.7 3.0 34 46-81 12-46 (46)
65 2eme_A Zinc finger protein 473 95.0 0.021 7.3E-07 33.4 3.2 34 46-81 12-46 (46)
66 2em5_A ZFP-95, zinc finger pro 95.0 0.016 5.6E-07 34.1 2.7 34 46-81 12-46 (46)
67 2emk_A Zinc finger protein 28 95.0 0.025 8.5E-07 33.3 3.5 34 46-81 12-46 (46)
68 2gli_A Protein (five-finger GL 94.9 0.037 1.3E-06 39.9 5.0 53 46-98 3-64 (155)
69 2em9_A Zinc finger protein 224 94.9 0.022 7.6E-07 33.3 3.1 34 46-81 12-46 (46)
70 2eoe_A Zinc finger protein 347 94.9 0.018 6.3E-07 33.7 2.7 34 46-81 12-46 (46)
71 2i13_A AART; DNA binding, zinc 94.9 0.028 9.7E-07 42.3 4.4 52 46-99 77-131 (190)
72 2emf_A Zinc finger protein 484 94.9 0.022 7.4E-07 33.6 3.1 34 46-81 12-46 (46)
73 2jp9_A Wilms tumor 1; DNA bind 94.9 0.034 1.2E-06 38.2 4.5 51 46-98 36-91 (119)
74 2ytr_A Zinc finger protein 347 94.9 0.027 9.2E-07 32.9 3.4 34 46-81 12-46 (46)
75 2ytd_A Zinc finger protein 473 94.9 0.023 7.8E-07 33.4 3.1 34 46-81 12-46 (46)
76 2epw_A Zinc finger protein 268 94.8 0.016 5.3E-07 34.0 2.3 34 46-81 12-46 (46)
77 2en6_A Zinc finger protein 268 94.8 0.013 4.6E-07 34.4 2.0 34 46-81 12-46 (46)
78 2eoo_A ZFP-95, zinc finger pro 94.8 0.017 5.8E-07 34.1 2.4 34 46-81 12-46 (46)
79 2emh_A Zinc finger protein 484 94.8 0.021 7.2E-07 33.5 2.8 34 46-81 12-46 (46)
80 2eq4_A Zinc finger protein 224 94.8 0.026 8.8E-07 33.0 3.2 34 46-81 12-46 (46)
81 2epz_A Zinc finger protein 28 94.8 0.028 9.7E-07 33.0 3.4 34 46-81 12-46 (46)
82 2em7_A Zinc finger protein 224 94.8 0.026 8.8E-07 33.1 3.1 34 46-81 12-46 (46)
83 2j7j_A Transcription factor II 94.8 0.042 1.4E-06 35.4 4.4 47 46-97 31-85 (85)
84 1tf6_A Protein (transcription 94.7 0.037 1.3E-06 41.6 4.7 53 46-98 72-131 (190)
85 2emm_A ZFP-95, zinc finger pro 94.7 0.025 8.5E-07 33.1 2.9 34 46-81 12-46 (46)
86 2elz_A Zinc finger protein 224 94.7 0.031 1.1E-06 32.9 3.4 34 46-81 12-46 (46)
87 2eml_A Zinc finger protein 28 94.7 0.028 9.6E-07 33.0 3.1 34 46-81 12-46 (46)
88 2wbs_A Krueppel-like factor 4; 94.6 0.052 1.8E-06 35.5 4.7 48 46-95 5-59 (89)
89 2ely_A Zinc finger protein 224 94.6 0.023 7.9E-07 33.5 2.7 34 46-81 12-46 (46)
90 1ubd_C Protein (YY1 zinc finge 94.6 0.046 1.6E-06 38.0 4.6 51 46-98 34-89 (124)
91 2csh_A Zinc finger protein 297 94.5 0.044 1.5E-06 37.6 4.3 50 46-98 10-62 (110)
92 2epq_A POZ-, at HOOK-, and zin 94.5 0.026 9E-07 33.1 2.7 35 46-82 10-45 (45)
93 2dmi_A Teashirt homolog 3; zin 94.5 0.011 3.9E-07 41.0 1.2 52 46-97 19-76 (115)
94 2ytg_A ZFP-95, zinc finger pro 94.4 0.02 7E-07 33.6 2.1 34 46-81 12-46 (46)
95 2emp_A Zinc finger protein 347 94.4 0.025 8.6E-07 33.2 2.4 34 46-81 12-46 (46)
96 2el6_A Zinc finger protein 268 94.4 0.036 1.2E-06 32.6 3.1 34 46-81 12-46 (46)
97 2en1_A Zinc finger protein 224 94.4 0.024 8.1E-07 33.3 2.3 34 46-81 12-46 (46)
98 2yso_A ZFP-95, zinc finger pro 94.3 0.038 1.3E-06 32.4 3.2 34 46-81 12-46 (46)
99 2ysp_A Zinc finger protein 224 94.3 0.021 7E-07 33.6 2.0 34 46-81 12-46 (46)
100 2ep0_A Zinc finger protein 28 94.3 0.03 1E-06 32.8 2.7 34 46-81 12-46 (46)
101 2em8_A Zinc finger protein 224 94.3 0.026 9.1E-07 33.2 2.4 34 46-81 12-46 (46)
102 2ytt_A Zinc finger protein 473 94.3 0.026 8.9E-07 33.2 2.4 34 46-81 12-46 (46)
103 2en8_A Zinc finger protein 224 94.3 0.034 1.2E-06 32.5 2.9 34 46-81 12-46 (46)
104 2emx_A Zinc finger protein 268 94.2 0.037 1.3E-06 32.1 2.9 34 46-81 10-44 (44)
105 2ep3_A Zinc finger protein 484 94.1 0.038 1.3E-06 32.4 2.8 34 46-81 12-46 (46)
106 2em2_A Zinc finger protein 28 94.1 0.044 1.5E-06 32.2 3.1 34 46-81 12-46 (46)
107 2ebt_A Krueppel-like factor 5; 94.0 0.14 4.7E-06 34.1 5.9 51 45-97 44-99 (100)
108 2epr_A POZ-, at HOOK-, and zin 94.0 0.028 9.6E-07 33.6 2.2 36 45-82 11-47 (48)
109 2lt7_A Transcriptional regulat 93.9 0.049 1.7E-06 40.5 3.8 52 46-99 50-104 (133)
110 2wbs_A Krueppel-like factor 4; 93.9 0.088 3E-06 34.3 4.6 49 45-95 34-87 (89)
111 2yu8_A Zinc finger protein 347 93.7 0.032 1.1E-06 32.7 1.9 34 46-81 12-46 (46)
112 2rpc_A Zinc finger protein ZIC 93.7 0.089 3E-06 38.1 4.7 52 46-99 62-118 (155)
113 2epa_A Krueppel-like factor 10 93.4 0.22 7.5E-06 31.6 5.8 49 44-94 15-70 (72)
114 2dmi_A Teashirt homolog 3; zin 93.3 0.027 9.3E-07 39.0 1.3 54 44-99 48-106 (115)
115 2jp9_A Wilms tumor 1; DNA bind 93.3 0.13 4.5E-06 35.2 4.8 51 46-98 6-63 (119)
116 1vd4_A Transcription initiatio 92.4 0.058 2E-06 34.4 1.9 36 46-85 14-49 (62)
117 2ep1_A Zinc finger protein 484 92.1 0.15 5.3E-06 29.5 3.4 33 46-80 12-45 (46)
118 2em3_A Zinc finger protein 28 92.1 0.12 4E-06 30.1 2.9 33 46-80 12-45 (46)
119 1tf6_A Protein (transcription 92.1 0.15 5E-06 38.2 4.1 51 46-98 104-161 (190)
120 2ysl_A Tripartite motif-contai 92.0 0.052 1.8E-06 35.6 1.3 46 41-86 15-68 (73)
121 3mjh_B Early endosome antigen 91.9 0.12 4.1E-06 31.8 2.7 27 46-72 5-32 (34)
122 2jr7_A DPH3 homolog; DESR1, CS 91.7 0.068 2.3E-06 39.3 1.8 47 30-85 6-55 (89)
123 2eq2_A Zinc finger protein 347 91.5 0.21 7.3E-06 29.0 3.6 33 46-80 12-45 (46)
124 1wge_A Hypothetical protein 26 91.0 0.1 3.6E-06 37.7 2.1 47 30-85 13-62 (83)
125 2emi_A Zinc finger protein 484 90.9 0.2 6.8E-06 29.1 3.0 33 46-80 12-45 (46)
126 2enf_A Zinc finger protein 347 90.6 0.26 8.9E-06 28.6 3.3 33 46-80 12-45 (46)
127 2yti_A Zinc finger protein 347 90.5 0.25 8.5E-06 28.7 3.2 33 46-80 12-45 (46)
128 2yth_A Zinc finger protein 224 90.5 0.28 9.5E-06 28.6 3.4 33 46-80 12-45 (46)
129 2eon_A ZFP-95, zinc finger pro 90.4 0.23 7.8E-06 29.1 2.9 33 46-80 12-45 (46)
130 1paa_A Yeast transcription fac 90.3 0.19 6.4E-06 26.1 2.3 27 46-72 2-29 (30)
131 2emg_A Zinc finger protein 484 90.2 0.3 1E-05 28.3 3.3 33 46-80 12-45 (46)
132 2eow_A Zinc finger protein 347 90.1 0.27 9.3E-06 28.4 3.1 33 46-80 12-45 (46)
133 2kr4_A Ubiquitin conjugation f 90.0 0.38 1.3E-05 33.3 4.3 37 42-85 10-58 (85)
134 2lv2_A Insulinoma-associated p 90.0 0.2 6.7E-06 35.0 2.8 29 46-74 56-85 (85)
135 1yop_A KTI11P; zinc finger, me 89.8 0.087 3E-06 38.2 0.8 47 30-85 6-55 (83)
136 2yts_A Zinc finger protein 484 89.7 0.28 9.5E-06 28.4 2.9 33 46-80 12-45 (46)
137 1wgm_A Ubiquitin conjugation f 89.7 0.46 1.6E-05 34.1 4.6 38 41-85 17-67 (98)
138 2en9_A Zinc finger protein 28 89.6 0.38 1.3E-05 28.0 3.5 33 46-80 12-45 (46)
139 2emj_A Zinc finger protein 28 89.5 0.28 9.4E-06 28.6 2.8 33 46-80 12-45 (46)
140 2eq1_A Zinc finger protein 347 89.5 0.34 1.2E-05 28.1 3.2 33 46-80 12-45 (46)
141 2em4_A Zinc finger protein 28 89.5 0.3 1E-05 28.5 2.9 33 46-80 12-45 (46)
142 2ytf_A Zinc finger protein 268 89.3 0.29 9.8E-06 28.3 2.8 33 46-80 12-45 (46)
143 2yrm_A B-cell lymphoma 6 prote 89.3 0.39 1.3E-05 27.7 3.4 33 46-80 10-43 (43)
144 2ecj_A Tripartite motif-contai 89.3 0.17 5.9E-06 31.5 1.8 40 42-81 11-58 (58)
145 2ytp_A Zinc finger protein 484 89.1 0.3 1E-05 28.4 2.7 33 46-80 12-45 (46)
146 1t1h_A Gspef-atpub14, armadill 89.0 0.12 4.2E-06 34.3 1.0 45 40-85 2-53 (78)
147 2el5_A Zinc finger protein 268 88.9 0.37 1.3E-05 27.3 3.0 32 46-79 10-42 (42)
148 2yrj_A Zinc finger protein 473 88.7 0.32 1.1E-05 28.1 2.7 33 46-80 12-45 (46)
149 2eor_A Zinc finger protein 224 88.7 0.33 1.1E-05 28.0 2.7 33 46-80 12-45 (46)
150 2ysj_A Tripartite motif-contai 88.6 0.1 3.5E-06 33.4 0.4 18 40-57 14-31 (63)
151 2em6_A Zinc finger protein 224 88.3 0.48 1.6E-05 27.5 3.3 33 46-80 12-45 (46)
152 1klr_A Zinc finger Y-chromosom 88.2 0.37 1.3E-05 24.6 2.5 24 46-69 2-26 (30)
153 2csy_A Zinc finger protein 183 88.1 0.07 2.4E-06 36.0 -0.6 46 39-86 8-60 (81)
154 1wir_A Protein arginine N-meth 87.9 0.5 1.7E-05 36.2 4.0 32 44-75 13-45 (121)
155 3ztg_A E3 ubiquitin-protein li 87.8 0.051 1.8E-06 37.3 -1.5 46 40-85 7-60 (92)
156 1wii_A Hypothetical UPF0222 pr 87.8 0.11 3.7E-06 37.8 0.1 37 43-84 20-56 (85)
157 2eof_A Zinc finger protein 268 87.6 0.47 1.6E-05 27.0 2.9 32 46-79 12-44 (44)
158 2eoy_A Zinc finger protein 473 87.6 0.32 1.1E-05 28.3 2.2 34 46-80 12-46 (46)
159 2dlk_A Novel protein; ZF-C2H2 87.5 0.41 1.4E-05 30.6 2.8 36 46-83 38-76 (79)
160 1ard_A Yeast transcription fac 87.5 0.59 2E-05 23.7 3.0 22 46-67 2-24 (29)
161 1zw8_A Zinc-responsive transcr 87.4 1.4 4.7E-05 29.2 5.5 51 47-97 2-64 (64)
162 2eoz_A Zinc finger protein 473 87.2 0.33 1.1E-05 28.3 2.0 33 46-80 12-45 (46)
163 2adr_A ADR1; transcription reg 87.2 0.42 1.4E-05 29.0 2.6 28 46-73 30-58 (60)
164 2ct1_A Transcriptional repress 87.1 0.41 1.4E-05 30.8 2.7 29 45-73 44-73 (77)
165 3hcs_A TNF receptor-associated 87.1 0.37 1.3E-05 36.7 2.9 40 52-94 90-130 (170)
166 2eom_A ZFP-95, zinc finger pro 87.0 0.64 2.2E-05 27.0 3.3 33 46-80 12-45 (46)
167 2kre_A Ubiquitin conjugation f 86.9 0.64 2.2E-05 33.4 3.9 37 42-85 25-73 (100)
168 2epu_A Zinc finger protein 32; 86.4 0.36 1.2E-05 27.9 1.9 33 46-80 12-45 (45)
169 2emz_A ZFP-95, zinc finger pro 86.3 0.49 1.7E-05 27.5 2.5 33 46-80 12-45 (46)
170 2ecw_A Tripartite motif-contai 86.3 1.3 4.3E-05 29.1 4.8 45 42-86 15-70 (85)
171 2ent_A Krueppel-like factor 15 86.0 0.64 2.2E-05 26.9 2.9 34 46-81 12-48 (48)
172 2yte_A Zinc finger protein 473 85.9 0.92 3.1E-05 25.4 3.5 31 46-78 10-41 (42)
173 1x6h_A Transcriptional repress 85.7 0.65 2.2E-05 29.8 3.1 37 45-83 46-83 (86)
174 1e4u_A Transcriptional repress 85.6 0.3 1E-05 33.8 1.5 42 44-86 9-61 (78)
175 2egp_A Tripartite motif-contai 85.6 0.19 6.4E-06 33.2 0.4 45 42-86 8-64 (79)
176 2eoh_A Zinc finger protein 28 85.6 0.77 2.6E-05 26.6 3.1 32 46-79 12-44 (46)
177 2en7_A Zinc finger protein 268 85.2 0.85 2.9E-05 25.8 3.2 32 46-79 12-44 (44)
178 3iuf_A Zinc finger protein UBI 84.7 0.62 2.1E-05 27.9 2.5 30 46-75 7-37 (48)
179 2ctu_A Zinc finger protein 483 84.4 0.013 4.4E-07 37.0 -5.6 43 46-97 18-63 (73)
180 2eq3_A Zinc finger protein 347 84.3 0.64 2.2E-05 26.7 2.3 33 46-80 12-45 (46)
181 2f42_A STIP1 homology and U-bo 84.3 0.99 3.4E-05 36.3 4.1 40 40-85 100-151 (179)
182 3uk3_C Zinc finger protein 217 84.2 0.58 2E-05 28.0 2.2 24 46-69 32-56 (57)
183 2enh_A Zinc finger protein 28 84.0 0.87 3E-05 26.3 2.8 33 46-80 12-45 (46)
184 2elp_A Zinc finger protein 406 84.0 0.34 1.2E-05 26.7 0.9 22 46-67 9-32 (37)
185 2m0f_A Zinc finger and BTB dom 83.9 0.68 2.3E-05 23.4 2.1 22 46-67 2-24 (29)
186 2eou_A Zinc finger protein 473 83.2 1.3 4.5E-05 25.3 3.4 32 46-79 12-44 (44)
187 2emb_A Zinc finger protein 473 83.0 1 3.5E-05 25.6 2.9 32 46-79 12-44 (44)
188 2drp_A Protein (tramtrack DNA- 83.0 0.77 2.6E-05 28.4 2.4 25 46-70 40-65 (66)
189 1znf_A 31ST zinc finger from X 82.8 1.2 4E-05 22.3 2.7 21 47-67 2-23 (27)
190 2d9h_A Zinc finger protein 692 82.7 1.2 4.2E-05 28.4 3.4 29 46-74 38-67 (78)
191 2els_A Zinc finger protein 406 82.6 0.86 3E-05 24.8 2.3 22 46-67 9-31 (36)
192 2ecv_A Tripartite motif-contai 82.6 0.23 8E-06 32.8 -0.2 46 41-86 14-70 (85)
193 2m0e_A Zinc finger and BTB dom 82.5 0.72 2.5E-05 23.2 1.8 22 46-67 2-24 (29)
194 2yto_A Zinc finger protein 484 82.5 0.97 3.3E-05 26.1 2.6 32 46-79 12-44 (46)
195 2elu_A Zinc finger protein 406 82.5 0.62 2.1E-05 29.0 1.7 25 47-71 10-35 (37)
196 2c2l_A CHIP, carboxy terminus 82.4 1.3 4.4E-05 35.2 4.1 38 42-85 204-253 (281)
197 1p7a_A BF3, BKLF, kruppel-like 82.2 1.2 4.2E-05 24.2 2.8 22 46-67 11-33 (37)
198 2m0d_A Zinc finger and BTB dom 82.0 0.99 3.4E-05 22.8 2.3 22 46-67 3-25 (30)
199 2elx_A Zinc finger protein 406 81.7 1.2 4.2E-05 23.7 2.7 23 46-68 7-30 (35)
200 2elm_A Zinc finger protein 406 81.4 0.95 3.3E-05 25.1 2.2 25 46-70 9-34 (37)
201 2kvh_A Zinc finger and BTB dom 81.3 0.92 3.1E-05 23.0 2.0 22 46-67 3-25 (27)
202 2eoj_A Zinc finger protein 268 80.9 0.91 3.1E-05 25.8 2.1 32 46-79 12-44 (44)
203 2elo_A Zinc finger protein 406 80.9 1.1 3.7E-05 24.4 2.3 23 46-68 9-32 (37)
204 1x5w_A Zinc finger protein 64, 80.7 1.1 3.7E-05 28.1 2.6 28 46-73 37-65 (70)
205 2ytb_A Zinc finger protein 32; 80.7 1.5 5.2E-05 24.4 3.0 24 46-70 11-35 (42)
206 2ect_A Ring finger protein 126 80.7 0.32 1.1E-05 32.3 -0.0 45 42-86 11-63 (78)
207 2yur_A Retinoblastoma-binding 80.5 0.2 6.9E-06 33.4 -1.1 44 41-84 10-61 (74)
208 1rik_A E6APC1 peptide; E6-bind 80.2 0.82 2.8E-05 23.2 1.5 22 46-67 2-24 (29)
209 1srk_A Zinc finger protein ZFP 79.7 1.7 5.9E-05 23.2 2.9 22 46-67 7-29 (35)
210 2ct5_A Zinc finger BED domain 79.7 0.87 3E-05 31.9 2.0 30 74-103 28-62 (73)
211 2yu5_A Zinc finger protein 473 79.3 1.1 3.7E-05 25.5 2.0 31 46-78 12-43 (44)
212 2elt_A Zinc finger protein 406 79.1 1.2 4.2E-05 23.9 2.2 22 46-67 9-31 (36)
213 2ct2_A Tripartite motif protei 78.5 3.7 0.00013 27.2 4.9 46 42-87 11-68 (88)
214 2elr_A Zinc finger protein 406 78.5 1.9 6.5E-05 23.1 2.8 22 46-67 9-31 (36)
215 2ea6_A Ring finger protein 4; 78.2 0.35 1.2E-05 30.9 -0.5 18 42-59 11-28 (69)
216 2d8t_A Dactylidin, ring finger 78.0 1.1 3.8E-05 29.2 2.0 45 44-90 13-64 (71)
217 2ep4_A Ring finger protein 24; 77.8 0.56 1.9E-05 30.7 0.4 41 43-85 12-62 (74)
218 2ept_A Zinc finger protein 32; 77.7 1.8 6.3E-05 24.1 2.7 25 46-71 10-35 (41)
219 2elq_A Zinc finger protein 406 77.7 1.4 4.9E-05 23.8 2.1 22 46-67 9-31 (36)
220 2k5c_A Uncharacterized protein 77.7 0.53 1.8E-05 34.8 0.3 38 47-84 9-60 (95)
221 2djb_A Polycomb group ring fin 77.4 0.33 1.1E-05 31.9 -0.7 44 41-86 10-61 (72)
222 2kvf_A Zinc finger and BTB dom 77.4 1.4 4.8E-05 22.3 1.9 22 46-67 3-25 (28)
223 2l6l_A DNAJ homolog subfamily 77.0 0.27 9.3E-06 37.5 -1.4 50 34-93 99-151 (155)
224 1rim_A E6APC2 peptide; E6-bind 77.0 2.7 9.2E-05 22.7 3.2 26 46-72 2-28 (33)
225 2en3_A ZFP-95, zinc finger pro 76.6 1.1 3.7E-05 25.8 1.4 32 46-79 12-44 (46)
226 2epc_A Zinc finger protein 32; 76.4 2.3 7.8E-05 23.7 2.8 22 46-67 11-33 (42)
227 2elv_A Zinc finger protein 406 76.2 1.8 6.2E-05 23.4 2.3 22 46-67 9-31 (36)
228 1bbo_A Human enhancer-binding 76.0 1.5 5E-05 26.1 2.0 24 46-69 29-53 (57)
229 2ecy_A TNF receptor-associated 75.8 0.33 1.1E-05 31.4 -1.1 45 42-87 11-62 (66)
230 2yuc_A TNF receptor-associated 75.7 0.78 2.7E-05 30.6 0.7 46 46-93 16-63 (76)
231 1x6e_A Zinc finger protein 24; 75.6 1.9 6.5E-05 27.2 2.6 24 46-69 42-66 (72)
232 1twf_L ABC10-alpha, DNA-direct 75.1 0.69 2.4E-05 32.3 0.3 31 43-85 25-55 (70)
233 2lvr_A Zinc finger and BTB dom 76.9 0.61 2.1E-05 23.9 0.0 22 46-67 3-25 (30)
234 2kvg_A Zinc finger and BTB dom 74.8 1.1 3.9E-05 22.9 1.1 21 46-66 3-24 (27)
235 1wim_A KIAA0161 protein; ring 72.8 0.55 1.9E-05 32.6 -0.7 49 46-94 5-73 (94)
236 2lvt_A Zinc finger and BTB dom 74.8 0.76 2.6E-05 23.6 0.0 22 46-67 2-24 (29)
237 1njq_A Superman protein; zinc- 72.3 3.2 0.00011 22.9 2.7 25 46-71 6-31 (39)
238 2ghf_A ZHX1, zinc fingers and 72.3 1.2 4.2E-05 31.9 1.1 38 46-84 50-88 (102)
239 2lvu_A Zinc finger and BTB dom 74.5 0.79 2.7E-05 23.1 0.0 21 46-66 2-23 (26)
240 1e8j_A Rubredoxin; iron-sulfur 71.8 2.3 7.8E-05 27.9 2.3 14 41-54 31-44 (52)
241 2epv_A Zinc finger protein 268 71.6 3.4 0.00012 23.5 2.8 25 46-71 12-37 (44)
242 2kiz_A E3 ubiquitin-protein li 71.0 6.6 0.00022 25.0 4.4 43 42-86 10-62 (69)
243 3pwf_A Rubrerythrin; non heme 70.8 1.5 5.1E-05 34.7 1.4 27 44-84 136-162 (170)
244 1ffk_W Ribosomal protein L37AE 70.6 1 3.6E-05 31.8 0.4 18 40-57 21-39 (73)
245 1bor_A Transcription factor PM 70.4 0.94 3.2E-05 28.7 0.1 42 45-86 5-48 (56)
246 2k5c_A Uncharacterized protein 70.2 1 3.5E-05 33.3 0.3 12 45-56 50-61 (95)
247 2gqj_A Zinc finger protein KIA 70.1 3.7 0.00013 27.8 3.1 26 46-71 54-80 (98)
248 2yuc_A TNF receptor-associated 69.9 3.1 0.00011 27.5 2.7 33 44-79 42-74 (76)
249 2eos_A B-cell lymphoma 6 prote 69.9 3.8 0.00013 22.9 2.7 25 46-71 11-36 (42)
250 2en2_A B-cell lymphoma 6 prote 69.9 2.6 8.8E-05 23.5 2.0 25 46-71 11-36 (42)
251 2l7x_A Envelope glycoprotein; 68.9 1.6 5.4E-05 31.3 1.0 21 46-66 30-50 (77)
252 4gzn_C ZFP-57, zinc finger pro 67.9 3.9 0.00013 26.4 2.7 27 46-73 32-59 (60)
253 3l11_A E3 ubiquitin-protein li 67.3 1.7 5.9E-05 30.8 1.0 43 44-87 13-62 (115)
254 3fl2_A E3 ubiquitin-protein li 67.2 0.7 2.4E-05 33.5 -1.1 42 44-86 50-98 (124)
255 2lcq_A Putative toxin VAPC6; P 66.9 1.2 4.1E-05 34.2 0.0 29 44-85 130-158 (165)
256 2cot_A Zinc finger protein 435 66.4 4.2 0.00014 25.8 2.7 25 46-71 46-71 (77)
257 3htk_C E3 SUMO-protein ligase 66.4 1.9 6.6E-05 37.0 1.3 37 44-85 179-230 (267)
258 1yui_A GAGA-factor; complex (D 66.1 3.8 0.00013 24.5 2.3 25 46-71 24-49 (54)
259 2epp_A POZ-, at HOOK-, and zin 65.4 6.2 0.00021 26.3 3.4 35 46-83 13-48 (66)
260 6rxn_A Rubredoxin; electron tr 64.6 2.4 8.3E-05 27.3 1.2 12 43-54 27-38 (46)
261 2jvx_A NF-kappa-B essential mo 64.3 5 0.00017 23.5 2.4 21 46-66 3-24 (28)
262 3ng2_A RNF4, snurf, ring finge 64.3 0.85 2.9E-05 29.3 -1.1 39 46-86 10-62 (71)
263 3jyw_9 60S ribosomal protein L 64.0 2.3 7.9E-05 30.0 1.1 13 42-54 22-34 (72)
264 2yu4_A E3 SUMO-protein ligase 64.0 5.3 0.00018 27.8 3.0 32 52-84 26-59 (94)
265 3hct_A TNF receptor-associated 63.9 13 0.00044 26.5 5.1 45 41-86 13-64 (118)
266 3j21_i 50S ribosomal protein L 63.7 2.3 7.8E-05 30.8 1.0 13 42-54 31-43 (83)
267 2ctd_A Zinc finger protein 512 63.4 6 0.0002 27.2 3.2 26 46-71 62-88 (96)
268 1lko_A Rubrerythrin all-iron(I 63.0 1.1 3.8E-05 35.7 -0.8 27 45-84 154-180 (191)
269 2ecn_A Ring finger protein 141 62.8 1.4 4.8E-05 28.4 -0.2 43 42-86 11-59 (70)
270 3vhs_A ATPase wrnip1; zinc fin 62.6 4.1 0.00014 24.0 1.8 19 75-93 6-25 (29)
271 2lce_A B-cell lymphoma 6 prote 62.5 6.1 0.00021 24.8 2.9 23 46-68 45-68 (74)
272 2xeu_A Ring finger protein 4; 62.3 0.76 2.6E-05 28.8 -1.6 40 46-87 3-56 (64)
273 3iz5_m 60S ribosomal protein L 62.1 2.6 8.9E-05 31.1 1.1 13 42-54 32-44 (92)
274 1vq8_Z 50S ribosomal protein L 61.8 2.5 8.5E-05 30.3 0.9 30 43-85 24-55 (83)
275 2e72_A POGO transposable eleme 61.8 5.7 0.0002 26.3 2.6 22 45-66 11-33 (49)
276 2ej4_A Zinc finger protein ZIC 61.3 6 0.0002 25.8 2.7 31 47-79 63-94 (95)
277 2y43_A E3 ubiquitin-protein li 61.1 0.42 1.4E-05 33.3 -3.3 41 44-86 20-68 (99)
278 3izc_m 60S ribosomal protein R 60.8 2.7 9.1E-05 31.0 1.0 13 42-54 32-44 (92)
279 2eox_A Zinc finger protein 473 60.6 2.9 0.0001 23.6 1.0 22 46-67 12-34 (44)
280 4a17_Y RPL37A, 60S ribosomal p 60.2 2.8 9.6E-05 31.6 1.0 32 42-85 32-64 (103)
281 1sp2_A SP1F2; zinc finger, tra 59.9 7.5 0.00026 20.0 2.5 22 46-67 2-26 (31)
282 2ckl_A Polycomb group ring fin 59.8 0.78 2.7E-05 32.4 -2.0 41 44-86 13-61 (108)
283 2wbt_A B-129; zinc finger; 2.7 59.3 7.3 0.00025 27.0 3.1 26 46-71 100-126 (129)
284 2i5o_A DNA polymerase ETA; zin 59.2 2.7 9.1E-05 26.3 0.6 22 45-66 8-29 (39)
285 4ayb_P DNA-directed RNA polyme 58.3 6.3 0.00022 26.0 2.3 11 44-54 21-31 (48)
286 1yuz_A Nigerythrin; rubrythrin 58.1 3.4 0.00012 33.3 1.2 26 45-84 170-195 (202)
287 2ckl_B Ubiquitin ligase protei 58.0 0.82 2.8E-05 34.7 -2.3 43 42-85 50-100 (165)
288 1zfd_A SWI5; DNA binding motif 57.7 9.3 0.00032 19.7 2.7 22 46-67 3-27 (32)
289 2kfq_A FP1; protein, de novo p 57.3 1.8 6.1E-05 23.2 -0.4 21 46-66 2-23 (32)
290 1iym_A EL5; ring-H2 finger, ub 56.5 0.52 1.8E-05 29.0 -3.1 38 46-85 5-53 (55)
291 3cc2_Z 50S ribosomal protein L 55.9 3.5 0.00012 31.6 0.9 32 42-85 56-88 (116)
292 2l0b_A E3 ubiquitin-protein li 55.2 0.74 2.5E-05 31.9 -2.8 41 44-86 38-88 (91)
293 1z6u_A NP95-like ring finger p 54.4 1.6 5.6E-05 33.2 -1.2 43 44-87 76-125 (150)
294 3sp4_A Aprataxin-like protein; 53.5 8.2 0.00028 31.7 2.8 25 44-68 167-193 (204)
295 3lrq_A E3 ubiquitin-protein li 53.3 1.4 4.6E-05 31.0 -1.7 42 44-86 20-69 (100)
296 1yk4_A Rubredoxin, RD; electro 53.0 5.1 0.00018 26.2 1.2 13 42-54 31-43 (52)
297 2kdx_A HYPA, hydrogenase/ureas 52.4 2.9 9.9E-05 30.7 -0.0 30 42-84 69-99 (119)
298 2jr6_A UPF0434 protein NMA0874 52.3 4.5 0.00015 27.9 0.9 31 42-83 4-34 (68)
299 2v3b_B Rubredoxin 2, rubredoxi 52.3 5.2 0.00018 26.5 1.2 13 42-54 32-44 (55)
300 1s24_A Rubredoxin 2; electron 52.2 4.9 0.00017 29.2 1.1 10 45-54 34-43 (87)
301 2ea5_A Cell growth regulator w 51.7 3.9 0.00013 27.1 0.5 37 44-86 13-57 (68)
302 1jm7_B BARD1, BRCA1-associated 51.7 2.8 9.7E-05 30.0 -0.2 37 45-85 21-65 (117)
303 1jm7_A BRCA1, breast cancer ty 51.6 2 6.7E-05 30.0 -1.1 43 45-87 20-70 (112)
304 1va1_A Transcription factor SP 51.3 10 0.00034 20.6 2.2 22 46-67 8-32 (37)
305 1wir_A Protein arginine N-meth 51.3 8.8 0.0003 29.2 2.5 33 71-103 11-45 (121)
306 2kn9_A Rubredoxin; metalloprot 50.9 6.4 0.00022 28.2 1.6 14 41-54 55-68 (81)
307 4rxn_A Rubredoxin; electron tr 50.3 6 0.0002 26.3 1.2 13 42-54 32-44 (54)
308 2eln_A Zinc finger protein 406 49.9 14 0.00046 21.8 2.7 22 46-67 9-33 (38)
309 3mkr_B Coatomer subunit alpha; 49.8 6.9 0.00024 34.3 1.9 30 46-88 278-308 (320)
310 3flo_B DNA polymerase alpha ca 49.7 1.8 6.3E-05 35.5 -1.7 39 44-85 20-59 (206)
311 2a25_A Ubiquitin ligase SIAH1; 49.3 7.5 0.00026 30.9 1.9 12 59-70 53-64 (193)
312 1fv5_A First zinc finger of U- 48.9 7.9 0.00027 22.8 1.5 20 46-65 8-28 (36)
313 1x4j_A Ring finger protein 38; 48.4 0.7 2.4E-05 30.5 -3.6 42 44-85 21-70 (75)
314 2ab3_A ZNF29; zinc finger prot 48.1 9 0.00031 18.9 1.5 22 46-67 2-26 (29)
315 2js4_A UPF0434 protein BB2007; 47.6 5 0.00017 27.8 0.6 31 42-83 4-34 (70)
316 1dx8_A Rubredoxin; electron tr 47.6 6.8 0.00023 27.1 1.2 14 41-54 35-48 (70)
317 4ayc_A E3 ubiquitin-protein li 47.3 3.3 0.00011 30.6 -0.5 38 46-85 53-97 (138)
318 1v87_A Deltex protein 2; ring- 46.7 0.79 2.7E-05 32.4 -3.8 12 74-85 81-92 (114)
319 1bhi_A CRE-BP1, ATF-2; CRE bin 46.3 13 0.00045 19.9 2.2 22 46-67 6-30 (38)
320 3h0g_L DNA-directed RNA polyme 45.9 8.5 0.00029 26.4 1.5 30 44-85 19-48 (63)
321 1rmd_A RAG1; V(D)J recombinati 45.3 0.98 3.4E-05 32.2 -3.5 44 42-86 19-69 (116)
322 1x3c_A Zinc finger protein 292 44.8 19 0.00064 25.4 3.2 27 46-72 27-56 (73)
323 1l8d_A DNA double-strand break 44.6 5.6 0.00019 28.4 0.4 11 48-58 49-59 (112)
324 2hf1_A Tetraacyldisaccharide-1 44.4 4.7 0.00016 27.7 0.0 31 42-83 4-34 (68)
325 2pk7_A Uncharacterized protein 43.8 5.4 0.00018 27.5 0.2 31 42-83 4-34 (69)
326 2jny_A Uncharacterized BCR; st 43.1 6.7 0.00023 27.0 0.6 33 40-83 4-36 (67)
327 4ap4_A E3 ubiquitin ligase RNF 42.5 4.5 0.00016 28.4 -0.3 35 47-86 49-83 (133)
328 2ecm_A Ring finger and CHY zin 41.9 20 0.00068 21.5 2.7 12 46-57 5-16 (55)
329 2djr_A Zinc finger BED domain- 39.8 14 0.00049 25.9 1.9 18 86-103 48-65 (76)
330 3vk6_A E3 ubiquitin-protein li 39.0 29 0.001 25.8 3.6 34 45-78 57-94 (101)
331 4dvc_A Thiol:disulfide interch 36.1 4.1 0.00014 29.7 -1.5 31 45-79 29-60 (184)
332 2l8e_A Polyhomeotic-like prote 36.1 16 0.00054 23.8 1.5 12 45-56 17-28 (49)
333 3noy_A 4-hydroxy-3-methylbut-2 36.1 20 0.00067 32.2 2.6 24 45-68 270-294 (366)
334 1i7f_A Heat shock protein 33; 36.0 7.6 0.00026 33.1 0.0 9 75-83 260-268 (292)
335 3gn3_A Putative protein-disulf 35.5 3.9 0.00013 31.7 -1.8 20 45-64 22-42 (182)
336 2czr_A TBP-interacting protein 34.7 7.7 0.00026 32.4 -0.2 25 43-67 151-175 (226)
337 1x6f_A Zinc finger protein 462 34.6 20 0.0007 24.4 2.0 35 46-82 25-60 (88)
338 2kpi_A Uncharacterized protein 34.2 11 0.00036 24.9 0.5 31 40-83 4-36 (56)
339 4ic3_A E3 ubiquitin-protein li 34.1 6.5 0.00022 26.1 -0.6 37 44-86 22-66 (74)
340 2akl_A PHNA-like protein PA012 33.7 17 0.00059 28.5 1.7 27 46-84 27-53 (138)
341 1chc_A Equine herpes virus-1 r 33.6 4.4 0.00015 25.7 -1.5 39 46-86 5-51 (68)
342 1zw8_A Zinc-responsive transcr 33.6 37 0.0013 22.0 3.1 25 45-69 37-64 (64)
343 4a0k_B E3 ubiquitin-protein li 33.5 8.9 0.0003 28.6 0.0 37 48-84 50-109 (117)
344 1p91_A Ribosomal RNA large sub 32.2 12 0.00042 29.1 0.6 12 47-58 3-14 (269)
345 2znm_A Thiol:disulfide interch 32.1 14 0.00048 27.4 0.9 10 45-54 30-39 (195)
346 2jvm_A Uncharacterized protein 30.2 18 0.0006 26.0 1.1 12 45-56 52-63 (80)
347 2jrr_A Uncharacterized protein 29.6 17 0.00057 25.2 0.9 10 45-54 39-48 (67)
348 3mv2_A Coatomer subunit alpha; 29.1 13 0.00043 32.8 0.2 30 45-87 286-316 (325)
349 3mwm_A ZUR, putative metal upt 28.4 22 0.00075 26.3 1.4 40 45-84 86-136 (139)
350 1ncs_A Peptide M30F, transcrip 28.0 15 0.0005 21.3 0.3 22 46-67 18-42 (47)
351 1dl6_A Transcription factor II 27.5 14 0.00046 24.4 0.1 34 46-90 11-45 (58)
352 3h0l_B Aspartyl/glutamyl-tRNA( 27.5 11 0.00037 34.7 -0.5 18 69-86 31-48 (478)
353 2bai_A Genome polyprotein; zin 27.3 6.6 0.00023 23.8 -1.3 9 76-84 17-25 (32)
354 3al0_B Aspartyl/glutamyl-tRNA( 27.1 11 0.00039 34.6 -0.5 16 71-86 32-47 (482)
355 3ip4_B Aspartyl/glutamyl-tRNA( 26.3 12 0.0004 34.5 -0.5 17 70-86 30-46 (483)
356 4ets_A Ferric uptake regulatio 26.1 28 0.00097 26.5 1.8 40 45-84 106-156 (162)
357 3eyy_A Putative iron uptake re 25.1 19 0.00066 26.8 0.6 40 45-84 89-139 (145)
358 3mhs_C SAGA-associated factor 25.1 22 0.00075 26.5 0.9 25 43-67 67-91 (99)
359 2k4x_A 30S ribosomal protein S 25.1 62 0.0021 21.1 3.0 29 44-83 16-44 (55)
360 2j9u_B VPS36, vacuolar protein 24.7 21 0.00072 25.5 0.7 10 75-84 17-26 (76)
361 2ecg_A Baculoviral IAP repeat- 24.5 13 0.00045 24.4 -0.4 38 44-87 23-68 (75)
362 2o03_A Probable zinc uptake re 24.2 51 0.0017 23.8 2.8 39 44-82 81-130 (131)
363 2gmg_A Hypothetical protein PF 24.0 40 0.0014 25.2 2.1 28 45-84 66-93 (105)
364 2yre_A F-box only protein 30; 23.2 65 0.0022 23.8 3.2 46 46-94 37-88 (100)
365 2jz8_A Uncharacterized protein 22.8 24 0.00083 25.7 0.7 12 45-56 47-58 (87)
366 2k9h_A Glycoprotein; hantaviru 22.5 51 0.0018 22.3 2.2 19 47-65 29-49 (57)
367 3kfu_F Aspartyl/glutamyl-tRNA( 22.3 15 0.00052 33.8 -0.5 17 70-86 30-46 (466)
368 3dpl_R Ring-box protein 1; ubi 22.3 4.1 0.00014 29.6 -3.6 10 75-84 89-98 (106)
369 3pih_A Uvrabc system protein A 22.1 29 0.001 34.0 1.4 36 44-84 247-282 (916)
370 3gmf_A Protein-disulfide isome 20.8 12 0.0004 29.5 -1.5 10 45-54 23-32 (205)
371 2xig_A Ferric uptake regulatio 20.7 24 0.00083 26.4 0.4 40 45-84 98-148 (150)
372 2y1n_A E3 ubiquitin-protein li 20.5 10 0.00034 34.0 -2.1 42 44-86 330-378 (389)
No 1
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=97.84 E-value=2.4e-05 Score=49.91 Aligned_cols=54 Identities=26% Similarity=0.602 Sum_probs=45.8
Q ss_pred CcccCCCCCCC-CCHHHHHhhhhhhccCCCcceecCcccccc--hhhHHHHhhhhcc
Q 030491 45 PDFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (176)
Q Consensus 45 ~~F~CPFC~e~-fDv~~L~~H~~eeH~~e~k~vVCPICaa~~--s~d~l~HL~~rH~ 98 (176)
..|.|+.|++. -....|..|....|..+.+.-.|++|.... ..+|..|+...|+
T Consensus 9 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~ 65 (66)
T 2drp_A 9 HTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65 (66)
T ss_dssp TEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred cceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence 36999999994 468889999999887677889999998764 5689999998886
No 2
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=97.80 E-value=3.1e-05 Score=51.09 Aligned_cols=54 Identities=20% Similarity=0.404 Sum_probs=46.9
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcccccc--hhhHHHHhhhhccc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHGH 99 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~--s~d~l~HL~~rH~~ 99 (176)
.|.|++|++ -.....|..|+...|..+.+...|++|.... ..+|..|+...|+.
T Consensus 15 ~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~ 71 (77)
T 2ct1_A 15 PYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY 71 (77)
T ss_dssp SEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred CeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCC
Confidence 599999999 5578899999998898777889999998764 57899999988865
No 3
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=97.42 E-value=0.00028 Score=43.38 Aligned_cols=51 Identities=24% Similarity=0.386 Sum_probs=40.0
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcccccc--hhhHHHHhhhhcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~--s~d~l~HL~~rH~ 98 (176)
.|.|++|++ --....|..|+.. |.. .+...|++|.... ..+|..|+...|+
T Consensus 4 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~hh~ 57 (57)
T 3uk3_C 4 SRECSYCGKFFRSNYYLNIHLRT-HTG-EKPYKCEFCEYAAAQKTSLRYHLERHHK 57 (57)
T ss_dssp -CBCTTTCCBCSCHHHHHHHHHH-HHC-CCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred CccCCCCcchhCChHHHHHHHHH-cCC-CCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence 699999999 5578889999886 433 4568999998764 6789999988875
No 4
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=97.29 E-value=0.00037 Score=46.83 Aligned_cols=52 Identities=19% Similarity=0.393 Sum_probs=25.8
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcccccc--hhhHHHHhhhhc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQH 97 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~--s~d~l~HL~~rH 97 (176)
.|.|+.|++ --....|..|+...|....+...|++|.... ..+|..|+...|
T Consensus 35 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H 89 (95)
T 2yt9_A 35 PYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVH 89 (95)
T ss_dssp SEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHHHTS
T ss_pred CCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHHHHhc
Confidence 355555555 3344555555554333323455555555432 345555554444
No 5
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=97.24 E-value=0.0004 Score=44.82 Aligned_cols=53 Identities=23% Similarity=0.333 Sum_probs=42.5
Q ss_pred CcccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcccccc--hhhHHHHhhhhccc
Q 030491 45 PDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHGH 99 (176)
Q Consensus 45 ~~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~--s~d~l~HL~~rH~~ 99 (176)
..|.|++|++ --....|..|+.. |.. .+...|++|.... ..+|..|+...|+.
T Consensus 8 ~~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C~~~f~~~~~L~~H~~~h~~~ 63 (70)
T 1x5w_A 8 HPEKCSECSYSCSSKAALRIHERI-HCT-DRPFKCNYCSFDTKQPSNLSKHMKKFHGD 63 (70)
T ss_dssp CSEECSSSSCEESSHHHHHHHHGG-GCC-SCSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred CCeECCCCCcccCCHHHHHHHHHH-cCC-CCCEeCCCCCCccCCHHHHHHHHHHHhCC
Confidence 3699999999 5567889999977 544 4568999998865 57899999888864
No 6
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=97.20 E-value=0.00049 Score=45.25 Aligned_cols=54 Identities=20% Similarity=0.320 Sum_probs=44.2
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCC--CcceecCcccccc--hhhHHHHhhhhccc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCE--SKVTVCPICSVKV--ARDMLSHITLQHGH 99 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e--~k~vVCPICaa~~--s~d~l~HL~~rH~~ 99 (176)
.|.|++|++ --....|..|+...|... .+...|++|.... ..+|..|+...|+.
T Consensus 15 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~ 73 (86)
T 1x6h_A 15 PYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGP 73 (86)
T ss_dssp CEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCC
T ss_pred CCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCC
Confidence 699999999 556788999998888654 3678999998764 57899999887764
No 7
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.15 E-value=0.00065 Score=43.67 Aligned_cols=48 Identities=29% Similarity=0.676 Sum_probs=39.8
Q ss_pred CcccCCCCCCCCCHHHHHhhhhhhccCCCcceecC-ccccc--chhhHHHHhhh
Q 030491 45 PDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCP-ICSVK--VARDMLSHITL 95 (176)
Q Consensus 45 ~~F~CPFC~e~fDv~~L~~H~~eeH~~e~k~vVCP-ICaa~--~s~d~l~HL~~ 95 (176)
..|.|++|++.|....|..|... ...+...|+ +|... ...+|..|+..
T Consensus 9 ~~~~C~~C~k~f~~~~L~~H~~~---~~~~p~~C~~~C~k~f~~~~~L~~H~~~ 59 (66)
T 2eod_A 9 RTQPCTYCTKEFVFDTIQSHQYQ---CPRLPVACPNQCGVGTVAREDLPGHLKD 59 (66)
T ss_dssp CEEECSSSCCEEEHHHHHHHHHH---CSSSEEECTTCCSCCEEETTTHHHHHHT
T ss_pred CCeeccccCCccCHHHHHHHHHH---cCCcCccCCcccCcccccHHHHHHHHHh
Confidence 46999999997778999999876 567889999 99775 35689999864
No 8
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=97.08 E-value=0.001 Score=40.78 Aligned_cols=50 Identities=16% Similarity=0.355 Sum_probs=39.2
Q ss_pred ccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcccccc--hhhHHHHhhhhcc
Q 030491 47 FPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (176)
Q Consensus 47 F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~--s~d~l~HL~~rH~ 98 (176)
|.|+.|++ --....|..|... |.. .+...|++|.... ..+|..|+...|+
T Consensus 2 ~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 54 (57)
T 1bbo_A 2 YICEECGIRXKKPSMLKKHIRT-HTD-VRPYHCTYCNFSFKTKGNLTKHMKSKAH 54 (57)
T ss_dssp CBCTTTCCBCSSHHHHHHHHHH-TSS-CCCEECSSSSCEESSHHHHHHHHHSSSS
T ss_pred CcCCCCcCcCCCHHHHHHHHHh-cCC-CCCccCCCCCchhcCHHHHHHHHHHhcc
Confidence 88999999 4567889999876 433 4678999998764 5689999876654
No 9
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=97.01 E-value=0.00082 Score=43.64 Aligned_cols=51 Identities=18% Similarity=0.318 Sum_probs=40.3
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcccccc--hhhHHHHhhhhcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~--s~d~l~HL~~rH~ 98 (176)
.|.|++|++ --....|..|+.. |.. .+...|++|.... ..+|..|+...++
T Consensus 14 ~~~C~~C~k~f~~~~~L~~H~~~-h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~ 67 (72)
T 1x6e_A 14 PYGCVECGKAFSRSSILVQHQRV-HTG-EKPYKCLECGKAFSQNSGLINHQRIHTS 67 (72)
T ss_dssp CEECSSSCCEESSHHHHHHHHHG-GGC-SCCEECSSSCCEESSHHHHHHHHHHHHS
T ss_pred CccCCCCCCccCCHHHHHHHHHh-cCC-CCCeECCCCCcccCCHHHHHHHHHhcCC
Confidence 699999999 5577889999876 433 4678999998864 5689999877654
No 10
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=96.96 E-value=0.0015 Score=40.58 Aligned_cols=51 Identities=22% Similarity=0.413 Sum_probs=39.9
Q ss_pred cccCCCCCCC-CCHHHHHhhhhhhccCCCcceecCcccccc--hhhHHHHhhhhcc
Q 030491 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (176)
Q Consensus 46 ~F~CPFC~e~-fDv~~L~~H~~eeH~~e~k~vVCPICaa~~--s~d~l~HL~~rH~ 98 (176)
.|.|+.|++. -....|..|... |.. .+...|++|.... ..+|..|+...|.
T Consensus 2 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~H~ 55 (60)
T 2adr_A 2 SFVCEVCTRAFARQEHLKRHYRS-HTN-EKPYPCGLCNRAFTRRDLLIRHAQKIHS 55 (60)
T ss_dssp CBCCTTTCCCBSCHHHHHHHHHT-TTS-SCSEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred cCcCCCCccccCCHHHHHHHHHH-hCC-CCCccCCCCCCccCCHHHHHHHHHHHcC
Confidence 4899999994 468889999876 543 4678999998864 5689999866664
No 11
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.93 E-value=0.00094 Score=47.11 Aligned_cols=50 Identities=24% Similarity=0.505 Sum_probs=40.7
Q ss_pred cccCCCCCCCC--CHHHHHhhhhhhccCCCcceecCcccccc--hhhHHHHhhhhcc
Q 030491 46 DFPCPYCYEDF--DIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (176)
Q Consensus 46 ~F~CPFC~e~f--Dv~~L~~H~~eeH~~e~k~vVCPICaa~~--s~d~l~HL~~rH~ 98 (176)
.|.|+.|++.| ....|..|+.. | ..+...|++|.... ..+|..|+...|.
T Consensus 34 ~~~C~~C~k~F~~~~~~L~~H~~~-h--~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~ 87 (96)
T 2ctd_A 34 SVSCPTCQAVGRKTIEGLKKHMEN-C--KQEMFTCHHCGKQLRSLAGMKYHVMANHN 87 (96)
T ss_dssp CEECTTTCSCEESSHHHHHHHHHH-H--CCCCCCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred CcCCCCCCCCcccCHHHHHHHHHH-H--CCCCeECCCCCCeeCCHHHHHHHhHHhcC
Confidence 69999999988 88999999876 5 45788999998764 5689999555564
No 12
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.91 E-value=0.0003 Score=48.93 Aligned_cols=53 Identities=19% Similarity=0.344 Sum_probs=42.6
Q ss_pred cccCCCCCCCC--CHHHHHhhhhhhccCCCcceecCcccccc--hhhHHHHhhhhccc
Q 030491 46 DFPCPYCYEDF--DIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHGH 99 (176)
Q Consensus 46 ~F~CPFC~e~f--Dv~~L~~H~~eeH~~e~k~vVCPICaa~~--s~d~l~HL~~rH~~ 99 (176)
.|.|++|++.| ....|..|+...|. ..+...|++|.... ..+|..|+...|+.
T Consensus 24 ~~~C~~C~k~f~~~~~~L~~H~~~h~~-~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~ 80 (98)
T 2gqj_A 24 EAVCPTCNVVTRKTLVGLKKHMEVCQK-LQDALKCQHCRKQFKSKAGLNYHTMAEHSA 80 (98)
T ss_dssp CCCCTTTCCCCSSCSHHHHHHHHHHHH-HHHHHSCSSSCCCCSCHHHHHHHHHHHSCS
T ss_pred CcCCCCCCCChhhhHHHHHHHHHHHcC-CCCCEECCCCCCccCCHHHHHHHHHHHcCC
Confidence 69999999966 58899999976543 24578999998764 57899999888864
No 13
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=96.89 E-value=0.0026 Score=41.31 Aligned_cols=52 Identities=25% Similarity=0.544 Sum_probs=40.5
Q ss_pred CcccCCCCCCCC-CHHHHHhhhhhhccCCCcceecCcccccc--hhhHHHHhhhhcc
Q 030491 45 PDFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (176)
Q Consensus 45 ~~F~CPFC~e~f-Dv~~L~~H~~eeH~~e~k~vVCPICaa~~--s~d~l~HL~~rH~ 98 (176)
..|.|+.|++.| ....|..|... |.. .+.-.|++|.... ..+|..|+...++
T Consensus 16 ~~~~C~~C~k~f~~~~~l~~H~~~-H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~ 70 (74)
T 2lce_A 16 KPYKCDRCQASFRYKGNLASHKTV-HTG-EKPYRCNICGAQFNRPANLKTHTRIHSG 70 (74)
T ss_dssp CSBCCTTSSCCBSCHHHHHHHHHH-HCC-CCSEECTTTCCEESCHHHHHHHHHHHCC
T ss_pred CCeECCCCCceeCCHHHHHHHHHH-cCC-CCCEECCCCCchhCCHHHHHHHHHhcCC
Confidence 479999999955 67889999876 433 4568999998864 5689999876554
No 14
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.81 E-value=0.0021 Score=42.05 Aligned_cols=52 Identities=21% Similarity=0.489 Sum_probs=40.5
Q ss_pred CcccCCCCCCCC-CHHHHHhhhhhhccCCCcceecCcccccc--hhhHHHHhhhhcc
Q 030491 45 PDFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (176)
Q Consensus 45 ~~F~CPFC~e~f-Dv~~L~~H~~eeH~~e~k~vVCPICaa~~--s~d~l~HL~~rH~ 98 (176)
..|.|+.|++.| ....|..|+.. |.. .+...|++|.... ..+|..|+...++
T Consensus 17 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~ 71 (77)
T 2cot_A 17 RRYKCDECGKSFSHSSDLSKHRRT-HTG-EKPYKCDECGKAFIQRSHLIGHHRVHTG 71 (77)
T ss_dssp CSSBCSSSCCBCSCHHHHHHHHTT-TCC-SCSEECSSSCCEESSHHHHHHHGGGSCC
T ss_pred CCEECCCCCcccCCHHHHHHHHHH-cCC-CcCeeCCCCCCccCCHHHHHHHHHHhCC
Confidence 469999999954 68889999875 443 4678999998864 5689999976554
No 15
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.80 E-value=0.0011 Score=43.46 Aligned_cols=54 Identities=19% Similarity=0.268 Sum_probs=42.7
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccC-CCcceecCcccccc--hhhHHHHhhhhccc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSC-ESKVTVCPICSVKV--ARDMLSHITLQHGH 99 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~-e~k~vVCPICaa~~--s~d~l~HL~~rH~~ 99 (176)
.|.|++|++ --....|..|+...+.. ..+...|++|.... ..+|..|+...|..
T Consensus 7 ~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~ 64 (78)
T 2d9h_A 7 GLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPA 64 (78)
T ss_dssp CEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTT
T ss_pred CeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCC
Confidence 699999999 55678899998765432 35678999998874 56899999888865
No 16
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=96.79 E-value=0.0016 Score=42.24 Aligned_cols=50 Identities=18% Similarity=0.468 Sum_probs=29.5
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcccccc--hhhHHHHhhhhc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQH 97 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~--s~d~l~HL~~rH 97 (176)
.|.|++|++ --....|..|....+. .+...|++|.... ..+|..|+...+
T Consensus 29 ~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~H~ 81 (82)
T 2kmk_A 29 PYPCQYCGKRFHQKSDMKKHTFIHTG--EKPHKCQVCGKAFSQSSNLITHSRKHT 81 (82)
T ss_dssp CEECSSSCCEESSHHHHHHHHHHHHT--CCCEECTTTSCEESSHHHHHHHHHHHC
T ss_pred CeeCCcCChhhCCHHHHHHHHHHhcC--CCCCcCCCcchhhCChHHHHHHHHhhC
Confidence 467777777 3356666777654432 3456677776543 456666665543
No 17
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.75 E-value=0.0016 Score=45.05 Aligned_cols=52 Identities=19% Similarity=0.298 Sum_probs=27.6
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcccccc--hhhHHHHhhhhccc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHGH 99 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~--s~d~l~HL~~rH~~ 99 (176)
.|.|++|++ --....|..|+...+. .+...|++|.... ..+|..|+...|+.
T Consensus 37 ~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~~~~~ 91 (110)
T 2csh_A 37 PYGCGVCGKKFKMKHHLVGHMKIHTG--IKPYECNICAKRFMWRDSFHRHVTSCTKS 91 (110)
T ss_dssp SEECTTTSCEESSSHHHHHHHTTTCC--CCCEECSSSCCEESCHHHHHHHHHHHHHH
T ss_pred CccCCCCCcccCCHHHHHHHHHHcCC--CCCeeCCCCcchhcCHHHHHHHHHHcccc
Confidence 366666666 3344556666543221 2345666665543 34666666655543
No 18
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=96.74 E-value=0.0022 Score=42.36 Aligned_cols=50 Identities=22% Similarity=0.448 Sum_probs=28.8
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcccccc--hhhHHHHhhhhc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQH 97 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~--s~d~l~HL~~rH 97 (176)
.|.|++|++ --....|..|+...+. .+...|++|.... ..+|..|+...+
T Consensus 34 ~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~H~ 86 (90)
T 1a1h_A 34 PFQCRICMRNFSRSDHLTTHIRTHTG--EKPFACDICGRKFARSDERKRHTKIHL 86 (90)
T ss_dssp CEECTTTCCEESCHHHHHHHHHHHHC--CCCEECTTTCCEESSHHHHHHHHGGGG
T ss_pred CccCCCCCcccCCHHHHHHHHHHcCC--CCCccCCCCCchhCCHHHHHHHHHHhc
Confidence 467777776 4455666667654322 2445677776543 446666665544
No 19
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=96.73 E-value=0.0026 Score=44.14 Aligned_cols=53 Identities=23% Similarity=0.483 Sum_probs=38.0
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhcc-CCCcceecCcccccc--hhhHHHHhhhhcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHS-CESKVTVCPICSVKV--ARDMLSHITLQHG 98 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~-~e~k~vVCPICaa~~--s~d~l~HL~~rH~ 98 (176)
.|.|++|++ -.....|..|....|. ...+...|++|.... ..+|..|+...++
T Consensus 35 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 91 (124)
T 2dlq_A 35 PFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTG 91 (124)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred CeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCC
Confidence 588888888 5577788888877543 345567888887764 4578888876554
No 20
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=96.70 E-value=0.0021 Score=43.16 Aligned_cols=47 Identities=19% Similarity=0.417 Sum_probs=19.2
Q ss_pred ccCCCCCCCC-CHHHHHhhhhhhccCCCcceecCcccccc--hhhHHHHhhh
Q 030491 47 FPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITL 95 (176)
Q Consensus 47 F~CPFC~e~f-Dv~~L~~H~~eeH~~e~k~vVCPICaa~~--s~d~l~HL~~ 95 (176)
|.|++|++.| +...|..|+...+. .+...|++|.... ..+|..|+..
T Consensus 9 ~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~ 58 (96)
T 2dmd_A 9 HKCEVCGKCFSRKDKLKTHMRCHTG--VKPYKCKTCDYAAADSSSLNKHLRI 58 (96)
T ss_dssp CCBTTTTBCCCCHHHHHHHGGGCCC--CCSEECSSSCCEESSHHHHHHHHHH
T ss_pred eECCCCCCccCCHHHHHHHHHhcCC--CCCEeCCCCCCccCCHHHHHHHHHH
Confidence 4455554422 33444444443211 2334445544332 2344444443
No 21
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=96.64 E-value=0.0027 Score=46.31 Aligned_cols=56 Identities=20% Similarity=0.312 Sum_probs=43.0
Q ss_pred CCCcccCCCCCC-CCCHHHHHhhhhhhccCCCcc-------eecCcccccc--hhhHHHHhhhhcc
Q 030491 43 VRPDFPCPYCYE-DFDIASLCSHLEDEHSCESKV-------TVCPICSVKV--ARDMLSHITLQHG 98 (176)
Q Consensus 43 ~r~~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~-------vVCPICaa~~--s~d~l~HL~~rH~ 98 (176)
....|.|+.|++ --+...|..|+...|..+... ..|++|.... ..+|..|+...++
T Consensus 22 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 87 (155)
T 2rpc_A 22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTG 87 (155)
T ss_dssp TCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHC
T ss_pred hhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCC
Confidence 345899999999 446888999999988875432 4799997764 5688899886554
No 22
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=96.60 E-value=0.0026 Score=44.18 Aligned_cols=53 Identities=25% Similarity=0.382 Sum_probs=42.4
Q ss_pred CcccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcccccc--hhhHHHHhhhhccc
Q 030491 45 PDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHGH 99 (176)
Q Consensus 45 ~~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~--s~d~l~HL~~rH~~ 99 (176)
..|.|++|++ --....|..|+...+ ..+...|++|.... ..+|..|+...|+-
T Consensus 65 ~~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~ 120 (124)
T 2dlq_A 65 QVFTCSVCQETFRRRMELRLHMVSHT--GEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120 (124)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHHHS--SSCSEECSSSCCEESSHHHHHHHHHHTSSC
T ss_pred CCeECCCCCCccCCHHHHHHHHHHcC--CCCCccCCCccchhCCHHHHHHHHHHHCCC
Confidence 4699999999 566788999997643 24678999998864 56899999887854
No 23
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=96.59 E-value=0.0024 Score=45.48 Aligned_cols=50 Identities=28% Similarity=0.603 Sum_probs=40.7
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcccccc--hhhHHHHhhhhccc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHGH 99 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~--s~d~l~HL~~rH~~ 99 (176)
.|.|++|++ --....|..|... | .++-.|++|.... ..+|..|+...||-
T Consensus 74 ~~~C~~C~k~f~~~~~l~~H~~~-H---~~~~~C~~C~k~f~~~~~l~~H~~~h~~~ 126 (129)
T 2wbt_A 74 QFVCPLCLMPFSSSVSLKQHIRY-T---EHTKVCPVCKKEFTSTDSALDHVCKKHNI 126 (129)
T ss_dssp SEECTTTCCEESSHHHHHHHHHH-T---CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred CeECCCCCcccCCHhHHHHHHHH-C---CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence 699999999 4567789999876 5 4567999998764 67899999988874
No 24
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=96.55 E-value=0.0029 Score=40.93 Aligned_cols=50 Identities=24% Similarity=0.481 Sum_probs=39.9
Q ss_pred ccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcccccc--hhhHHHHhhhhcc
Q 030491 47 FPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (176)
Q Consensus 47 F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~--s~d~l~HL~~rH~ 98 (176)
|.|+.|++ --+...|..|+...+ +.+...|++|.... ..+|..|+...++
T Consensus 2 ~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 54 (82)
T 2kmk_A 2 FDCKICGKSFKRSSTLSTHLLIHS--DTRPYPCQYCGKRFHQKSDMKKHTFIHTG 54 (82)
T ss_dssp EECSSSCCEESSHHHHHHHHHHHH--TCCCEECSSSCCEESSHHHHHHHHHHHHT
T ss_pred ccCCCCcccccCchhHHHHHHHcC--CCCCeeCCcCChhhCCHHHHHHHHHHhcC
Confidence 89999999 557888999998754 34678999998764 5689999986654
No 25
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.45 E-value=0.0058 Score=40.93 Aligned_cols=54 Identities=22% Similarity=0.402 Sum_probs=41.3
Q ss_pred CcccCCCCCCCC-CHHHHHhhhhhhccCCCcc-------eecCcccccc--hhhHHHHhhhhcc
Q 030491 45 PDFPCPYCYEDF-DIASLCSHLEDEHSCESKV-------TVCPICSVKV--ARDMLSHITLQHG 98 (176)
Q Consensus 45 ~~F~CPFC~e~f-Dv~~L~~H~~eeH~~e~k~-------vVCPICaa~~--s~d~l~HL~~rH~ 98 (176)
..|+|+.|++.| ....|..|+...|..+... ..|++|.... ..+|..|+...++
T Consensus 24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~ 87 (95)
T 2ej4_A 24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTG 87 (95)
T ss_dssp SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHT
T ss_pred CCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCC
Confidence 468899999944 6788999998878765321 6899998764 5689999886544
No 26
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=96.44 E-value=0.0042 Score=43.75 Aligned_cols=53 Identities=26% Similarity=0.451 Sum_probs=42.2
Q ss_pred CcccCCCCCCCC-CHHHHHhhhhhhccCCCcceecCcccccc--hhhHHHHhhhhccc
Q 030491 45 PDFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHGH 99 (176)
Q Consensus 45 ~~F~CPFC~e~f-Dv~~L~~H~~eeH~~e~k~vVCPICaa~~--s~d~l~HL~~rH~~ 99 (176)
..|.||+|++.| ....|..|+...+ ..++-.|++|...- ..+|..|+...|..
T Consensus 27 ~~h~C~~Cgk~F~~~~~L~~H~~~H~--~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~ 82 (85)
T 2lv2_A 27 ECHLCPVCGESFASKGAQERHLRLLH--AAQVFPCKYCPATFYSSPGLTRHINKCHPS 82 (85)
T ss_dssp TTEECTTSCCEESSHHHHHHHHHTTS--CSSSEECTTSSCEESSHHHHHHHHHTTCTT
T ss_pred CCEECCCCCCCcCcHHHHhhhhhhcc--CCCccCCCCCCCEeCCHHHHHHhCcccCcC
Confidence 469999999954 6788999987654 34678999998864 67999999877753
No 27
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=96.42 E-value=0.0044 Score=41.50 Aligned_cols=53 Identities=25% Similarity=0.470 Sum_probs=41.7
Q ss_pred CcccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcccccc--hhhHHHHhhhhccc
Q 030491 45 PDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHGH 99 (176)
Q Consensus 45 ~~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~--s~d~l~HL~~rH~~ 99 (176)
..|.|++|++ -.....|..|+... . ..+...|++|.... ..+|..|+...|+-
T Consensus 35 ~~~~C~~C~~~f~~~~~l~~H~~~h-~-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~ 90 (96)
T 2dmd_A 35 KPYKCKTCDYAAADSSSLNKHLRIH-S-DERPFKCQICPYASRNSSQLTVHLRSHTGD 90 (96)
T ss_dssp CSEECSSSCCEESSHHHHHHHHHHS-C-CCCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred CCEeCCCCCCccCCHHHHHHHHHHh-C-CCCCccCCCCCCccCCHHHHHHHHHHhcCC
Confidence 3699999999 55788999999864 3 34668999998764 56899999877654
No 28
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=96.40 E-value=0.0045 Score=42.30 Aligned_cols=52 Identities=19% Similarity=0.442 Sum_probs=38.6
Q ss_pred CcccCCCCCCCC-CHHHHHhhhhhhccCCCcceecCcccccc--hhhHHHHhhhhcc
Q 030491 45 PDFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (176)
Q Consensus 45 ~~F~CPFC~e~f-Dv~~L~~H~~eeH~~e~k~vVCPICaa~~--s~d~l~HL~~rH~ 98 (176)
..|.|++|++.| +...|..|+...+. .+...|++|.... ..+|..|+...++
T Consensus 16 ~~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 70 (106)
T 2ee8_A 16 KEFICKFCGRHFTKSYNLLIHERTHTD--ERPYTCDICHKAFRRQDHLRDHRYIHSK 70 (106)
T ss_dssp CCCBCSSSCCBCSSHHHHHHHHHHHCC--SCCCBCSSSCCBCSCHHHHHHHGGGSCC
T ss_pred cCeECCCCCCccCCHHHHHHHHHHcCC--CCCcCCCCccchhCCHHHHHHHHHHhCC
Confidence 469999999944 67788899876433 3567899997764 5688888876654
No 29
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=96.32 E-value=0.0037 Score=41.83 Aligned_cols=55 Identities=25% Similarity=0.424 Sum_probs=42.3
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcccccc--hhhHHHHhhhhccchhh
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHGHLFK 102 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~--s~d~l~HL~~rH~~~~k 102 (176)
.|.|+.|++ --....|..|... |.. .+...|++|.... ..+|..|+...|+..|.
T Consensus 3 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~ 60 (88)
T 1llm_C 3 PFQCRICMRNFSRSDHLTTHIRT-HTG-EKPFACDICGRKFARSDERKRHRDIQHILPIL 60 (88)
T ss_dssp CEECTTTCCEESCHHHHHHHHHH-HHC-CCCEECTTTCCEESSHHHHHHHHHHHTHHHHH
T ss_pred CCcCCCCCCccCCHHHHHHHHHH-cCC-CCCccCCCCCCccCCHHHHHHHHHHhCCCcch
Confidence 589999999 4467889999876 543 4568999998764 57899999988875443
No 30
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.31 E-value=0.0013 Score=44.59 Aligned_cols=51 Identities=20% Similarity=0.362 Sum_probs=41.4
Q ss_pred CcccCCCCCCCCCHHHHHhhhhhhccCCCcceecCcccccc-hhhHHHHhhhhcc
Q 030491 45 PDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKV-ARDMLSHITLQHG 98 (176)
Q Consensus 45 ~~F~CPFC~e~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~-s~d~l~HL~~rH~ 98 (176)
..+.|+||++.|....|-.|. .|. ..+.+.||.|...+ ..+|..|+..-.+
T Consensus 16 r~~~C~~C~~~~~~~~L~~H~--~~c-~~~~~~C~~C~~~~~~~~l~~H~~~c~~ 67 (75)
T 2d9k_A 16 RLAVCQHCDLELSILKLKEHE--DYC-GARTELCGNCGRNVLVKDLKTHPEVCGR 67 (75)
T ss_dssp CCEECSSSCCEECHHHHHHHH--HHH-HHCEEECSSSCCEEETTGGGTHHHHBTT
T ss_pred cccCCcccChHhhHHHHHHHH--hHc-CCCceEcccCCCcCcHHHHHHHHHHccC
Confidence 469999999999999999998 564 46779999998765 5788999875433
No 31
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=96.24 E-value=0.0054 Score=40.51 Aligned_cols=49 Identities=22% Similarity=0.554 Sum_probs=39.3
Q ss_pred cccCCCCCCCC-CHHHHHhhhhhhccCCCcceecCcccccc--hhhHHHHhhhh
Q 030491 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQ 96 (176)
Q Consensus 46 ~F~CPFC~e~f-Dv~~L~~H~~eeH~~e~k~vVCPICaa~~--s~d~l~HL~~r 96 (176)
-|.|+.|++.| ....|..|... |.. .++-.|++|...- ..+|..|+...
T Consensus 4 py~C~~C~k~F~~~~~L~~H~~~-Ht~-ekp~~C~~C~k~F~~~~~L~~H~~~H 55 (60)
T 4gzn_C 4 PFFCNFCGKTYRDASGLSRHRRA-HLG-YRPRSCPECGKCFRDQSEVNRHLKVH 55 (60)
T ss_dssp CEECTTTCCEESSHHHHHHHHHH-HHT-CCCEECTTTCCEESSHHHHHHHGGGG
T ss_pred CccCCCCCCEeCCHHHHHHHHHH-hCC-CcCeECCCCCCCcCCHHHHHHHhCcc
Confidence 49999999955 67789999865 654 5788999998864 67999998753
No 32
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=96.23 E-value=0.015 Score=39.64 Aligned_cols=53 Identities=21% Similarity=0.289 Sum_probs=40.7
Q ss_pred CcccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcccccc--hhhHHHHhhhhccc
Q 030491 45 PDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHGH 99 (176)
Q Consensus 45 ~~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~--s~d~l~HL~~rH~~ 99 (176)
..|.|++|++ -.....|..|....+ ..+...|++|.... ..+|..|+...++.
T Consensus 44 ~~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~ 99 (106)
T 2ee8_A 44 RPYTCDICHKAFRRQDHLRDHRYIHS--KEKPFKCQECGKGFCQSRTLAVHKTLHMQT 99 (106)
T ss_dssp CCCBCSSSCCBCSCHHHHHHHGGGSC--CCCTTSCSSSCCCCSSHHHHHHHHHHTTSC
T ss_pred CCcCCCCccchhCCHHHHHHHHHHhC--CCCCeECCCcCCcccCHHHHHHHHHHhCCC
Confidence 3699999999 457889999977543 24568999998764 56899999776653
No 33
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=96.20 E-value=0.0048 Score=41.24 Aligned_cols=53 Identities=28% Similarity=0.565 Sum_probs=41.8
Q ss_pred CcccCCCCCCCC-CHHHHHhhhhhhccCCCcceecCcccccc--hhhHHHHhhhhccc
Q 030491 45 PDFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHGH 99 (176)
Q Consensus 45 ~~F~CPFC~e~f-Dv~~L~~H~~eeH~~e~k~vVCPICaa~~--s~d~l~HL~~rH~~ 99 (176)
..|.|++|++.| +...|..|+.. |.. .+...|++|.... ..+|..|+...|+.
T Consensus 6 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~ 61 (95)
T 2yt9_A 6 SGVACEICGKIFRDVYHLNRHKLS-HSG-EKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61 (95)
T ss_dssp SCEECSSSCCEESSSHHHHHHHHH-SCS-SCSEECSSSCCEESCHHHHHHHHHHHCCC
T ss_pred CCeECCCCCCccCChHHHHHHHHh-cCC-CCCCcCCCCCCccCCHHHHHHHHHHhcCC
Confidence 369999999944 67889999986 433 4568999998764 57899999887763
No 34
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=96.07 E-value=0.0065 Score=41.94 Aligned_cols=45 Identities=22% Similarity=0.443 Sum_probs=32.8
Q ss_pred cccCCCCCCC-CCHHHHHhhhhhhccCCCcceecCcccccc--hhhHHHHhh
Q 030491 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHIT 94 (176)
Q Consensus 46 ~F~CPFC~e~-fDv~~L~~H~~eeH~~e~k~vVCPICaa~~--s~d~l~HL~ 94 (176)
.|.|++|++. -....|..|... | .+...|++|.... ..+|..|++
T Consensus 16 ~~~C~~C~~~f~~~~~l~~H~~~-H---~~~~~C~~C~~~f~~~~~l~~H~~ 63 (107)
T 1wjp_A 16 VYQCRLCNAKLSSLLEQGSHERL-C---RNAAVCPYCSLRFFSPELKQEHES 63 (107)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHH-H---HHSBCCTTTCCCBSSHHHHHHHHH
T ss_pred CeECCCCCCccCCHHHHHHHHHH-C---CCCccCCCCCCccCCHHHHHHHHH
Confidence 5888888884 466778888876 4 2567888887764 567888874
No 35
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=96.02 E-value=0.0011 Score=44.47 Aligned_cols=51 Identities=10% Similarity=0.039 Sum_probs=43.0
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcccccc--hhhHHHHhhhhccc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHGH 99 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~--s~d~l~HL~~rH~~ 99 (176)
.|.|++|++ --....|..|....|. ...+|++|.... ..+|..||...|+.
T Consensus 31 ~~~C~~C~k~f~~~~~L~~H~~~h~~---~~~~c~~C~~~f~~~~~L~~H~~~~h~~ 84 (88)
T 1llm_C 31 PFACDICGRKFARSDERKRHRDIQHI---LPILEDKVEELLSKNYHLENEVARLKKL 84 (88)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHHTH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCCCccCCHHHHHHHHHHhCC---CcchHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 599999999 5577899999999884 678999998764 56899999988865
No 36
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.77 E-value=0.008 Score=35.36 Aligned_cols=35 Identities=23% Similarity=0.205 Sum_probs=27.8
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|++|++ --....|..|....|..+ ++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~~H~~~-k~~~C~~C 47 (47)
T 2epx_A 12 PYECIECGKAFIQNTSLIRHWRYYHTGE-KPSGPSSG 47 (47)
T ss_dssp SBCCSSSCCCBSSHHHHHHHHTTTTTTS-CSSSCCCC
T ss_pred CEECCccCchhCChHHHHHHhHhhcCCC-CCCCCCCC
Confidence 599999999 455788999988567543 56889998
No 37
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=95.71 E-value=0.016 Score=37.42 Aligned_cols=52 Identities=23% Similarity=0.486 Sum_probs=41.2
Q ss_pred cccCCC--CCC-CCCHHHHHhhhhhhccCCCcceecCc--ccccc--hhhHHHHhhhhcc
Q 030491 46 DFPCPY--CYE-DFDIASLCSHLEDEHSCESKVTVCPI--CSVKV--ARDMLSHITLQHG 98 (176)
Q Consensus 46 ~F~CPF--C~e-~fDv~~L~~H~~eeH~~e~k~vVCPI--Caa~~--s~d~l~HL~~rH~ 98 (176)
.|.|++ |++ --....|..|+...|.. .+...|++ |.... ..+|..|+...++
T Consensus 7 ~~~C~~~~C~~~f~~~~~L~~H~~~~H~~-~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~ 65 (79)
T 2dlk_A 7 GMPCDFPGCGRIFSNRQYLNHHKKYQHIH-QKSFSCPEPACGKSFNFKKHLKEHMKLHSD 65 (79)
T ss_dssp SEECSSTTTCCEESSHHHHHHHHHHGGGS-CCCEECSCTTTCCEESSHHHHHHHHHHHHT
T ss_pred CccCCCCCCcCccCCHHHHHHHHHHHhCC-CCCeECCCCCCcCccCCHHHHHHHHHHhCC
Confidence 588888 999 45788999999877765 46789999 98764 5789999986554
No 38
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.68 E-value=0.012 Score=34.64 Aligned_cols=34 Identities=18% Similarity=0.149 Sum_probs=26.6
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|++|++ --....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ytn_A 12 PYKCNECGKVFTQNSHLARHRGI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHGGG-TSC-CCCCSCCCC
T ss_pred CeECCCCCCeeCCHHHHHHHhhh-cCC-CCCCCCCCC
Confidence 699999999 4466788899754 544 367899998
No 39
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=95.62 E-value=0.018 Score=40.21 Aligned_cols=49 Identities=24% Similarity=0.516 Sum_probs=26.7
Q ss_pred cccCC--CCCC-CCCHHHHHhhhhhhccCCCcceecCcccccc--hhhHHHHhhhhc
Q 030491 46 DFPCP--YCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQH 97 (176)
Q Consensus 46 ~F~CP--FC~e-~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~--s~d~l~HL~~rH 97 (176)
.|.|| .|++ --+...|..|+. .| ..+...|++|.... ..+|..|+...+
T Consensus 5 ~~~C~~~~C~~~f~~~~~l~~H~~-~h--~~~~~~C~~C~~~f~~~~~l~~H~~~h~ 58 (124)
T 1ubd_C 5 TIACPHKGCTKMFRDNSAMRKHLH-TH--GPRVHVCAECGKAFVESSKLKRHQLVHT 58 (124)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHG-GG--SCCCEECTTTCCEESSHHHHHHHGGGTS
T ss_pred cccCCCCCCcCccCCHHHHHHHHH-Hc--CCCCeECCCCCchhCCHHHHHHHHHHcC
Confidence 46666 5666 334556666654 34 34455666665543 345666655443
No 40
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.61 E-value=0.0089 Score=35.22 Aligned_cols=34 Identities=21% Similarity=0.145 Sum_probs=26.9
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|++|++ --....|..|... |..+ ++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~~c 46 (46)
T 2eq0_A 12 PYKCHECGKVFRRNSHLARHQLI-HTGE-KPSGPSSG 46 (46)
T ss_dssp CEECTTTCCEESSHHHHHHHHTT-TCCC-CCSCCSCC
T ss_pred CeECCCCCchhCCHHHHHHHHHH-cCCC-CCCCCCCC
Confidence 699999999 5567788999765 6544 67889998
No 41
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=95.58 E-value=0.012 Score=34.56 Aligned_cols=34 Identities=21% Similarity=0.121 Sum_probs=26.8
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|+.|++ --....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2em0_A 12 TWKCRECDMCFSQASSLRLHQNV-HVG-EKPSGPSSG 46 (46)
T ss_dssp CCCCSSSCCCCSSHHHHHHHGGG-GSS-SSCSCSSCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-cCC-CCCcCCCCC
Confidence 599999999 4566789999866 643 467889998
No 42
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=95.54 E-value=0.01 Score=35.00 Aligned_cols=34 Identities=18% Similarity=0.165 Sum_probs=26.8
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|++|++ --....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~c 46 (46)
T 2ema_A 12 RYKCNECGKVFSRNSQLSQHQKI-HTG-EKPSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHTG-GGC-CCCCSSSCC
T ss_pred CcCCCCCcchhCCHHHHHHHHHh-cCC-CCCCCCCCC
Confidence 599999999 4567888999765 544 367899998
No 43
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=95.52 E-value=0.02 Score=38.37 Aligned_cols=55 Identities=22% Similarity=0.382 Sum_probs=40.1
Q ss_pred CCCcccCCC--CCC-CCCHHHHHhhhhhhccCCCcceecC--cccccc--hhhHHHHhhhhccc
Q 030491 43 VRPDFPCPY--CYE-DFDIASLCSHLEDEHSCESKVTVCP--ICSVKV--ARDMLSHITLQHGH 99 (176)
Q Consensus 43 ~r~~F~CPF--C~e-~fDv~~L~~H~~eeH~~e~k~vVCP--ICaa~~--s~d~l~HL~~rH~~ 99 (176)
....|.|++ |++ --....|..|+...+ ..+...|| +|.... ..+|..|+...++.
T Consensus 12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~ 73 (100)
T 2ebt_A 12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHT--GEKPYKCTWEGCDWRFARSDELTRHYRKHTGA 73 (100)
T ss_dssp SCCCEECCSSSCCCEESCHHHHHHHHHHHS--CCCCEECCSSSCCCEESSHHHHHHHHHHHTSC
T ss_pred cCcceEcCCCCCCCcccCHHHHHHHHHHhC--CCCCeeCCCCCCCCccCCHHHHHHHHHHhCCC
Confidence 345799998 999 557888999998643 24567897 597764 56888998766553
No 44
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.50 E-value=0.013 Score=34.41 Aligned_cols=34 Identities=15% Similarity=0.015 Sum_probs=26.7
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|++|++ --....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2eop_A 12 PHECRECGKSFSFNSQLIVHQRI-HTG-ENPSGPSSG 46 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHTT-TTT-SCCSCCCCC
T ss_pred CeeCCCCCchhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 699999999 4566889999765 543 457889998
No 45
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=95.47 E-value=0.019 Score=37.71 Aligned_cols=51 Identities=25% Similarity=0.505 Sum_probs=39.6
Q ss_pred cccCCC--CCC-CCCHHHHHhhhhhhccCCCcceecCcccccc--hhhHHHHhhhhcc
Q 030491 46 DFPCPY--CYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (176)
Q Consensus 46 ~F~CPF--C~e-~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~--s~d~l~HL~~rH~ 98 (176)
.|.||+ |++ --....|..|+...+. .+...|++|.... ..+|..|+...++
T Consensus 4 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 59 (90)
T 1a1h_A 4 PYACPVESCDRRFSQSGSLTRHIRIHTG--QKPFQCRICMRNFSRSDHLTTHIRTHTG 59 (90)
T ss_dssp CEECCSSSCCCEESSHHHHHHHHHHHHC--CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred ceECCCCCCCCccCCHHHHHHHHHHhCC--CCCccCCCCCcccCCHHHHHHHHHHcCC
Confidence 699995 999 4567889999886543 4568999998764 5689999986654
No 46
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=95.46 E-value=0.013 Score=43.70 Aligned_cols=48 Identities=25% Similarity=0.322 Sum_probs=29.7
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcccccc--hhhHHHHhhh
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITL 95 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~--s~d~l~HL~~ 95 (176)
.|.|+.|++ =-....|..|+. .|.. .++-.|++|...- ..+|..|+..
T Consensus 22 ~y~C~~C~k~F~~~~~L~~H~~-~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~ 72 (133)
T 2lt7_A 22 YYICIVCKRSYVCLTSLRRHFN-IHSW-EKKYPCRYCEKVFPLAEYRTKHEIH 72 (133)
T ss_dssp EEEETTTCCEESCHHHHHHHHH-HHHC-CSCEECSSSSCEESSHHHHHHHHHH
T ss_pred CeECCCCCCCcCCHHHHHHHHH-HcCC-CCCeeCCccCeecccccchhhhccc
Confidence 577777777 345667777765 3543 3456777776543 4566667654
No 47
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=95.43 E-value=0.017 Score=36.96 Aligned_cols=49 Identities=24% Similarity=0.476 Sum_probs=37.1
Q ss_pred CcccCCC--CCC-CCCHHHHHhhhhhhccCCCcceecCcccccc--hhhHHHHhhh
Q 030491 45 PDFPCPY--CYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITL 95 (176)
Q Consensus 45 ~~F~CPF--C~e-~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~--s~d~l~HL~~ 95 (176)
..|.||+ |++ --....|..|... |.. .+...|++|.... ..+|..|+..
T Consensus 18 ~~~~C~~~~C~k~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~ 71 (73)
T 1f2i_G 18 RPYACPVESCDRRFSRSDELTRHIRI-HTG-QKPFQCRICMRNFSRSDHLTTHIRT 71 (73)
T ss_dssp CCEECSSTTBCCEESSHHHHHHHHHH-HHC-CCCEECTTTCCEESCHHHHHHHHTT
T ss_pred CccCCcCCCCCCccCCHHHHHHHHHh-hCC-CCCeECCCCCchhCCHHHHHHHHHh
Confidence 3699996 999 5567889999865 443 4568999998864 5688888753
No 48
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.42 E-value=0.015 Score=34.14 Aligned_cols=34 Identities=15% Similarity=0.141 Sum_probs=26.6
Q ss_pred cccCCCCCCC-CCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e~-fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|++|++. -....|..|.. .|.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~C 46 (46)
T 2eov_A 12 PYKCSDCGKSFTWKSRLRIHQK-CHTG-ERHSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHHH-HHSC-CSSCCSCCC
T ss_pred CccCCccChhhCCHHHHHHHHH-hcCC-CCCCCCCCC
Confidence 5999999994 45788999975 4654 367889998
No 49
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=95.38 E-value=0.018 Score=41.75 Aligned_cols=52 Identities=23% Similarity=0.438 Sum_probs=40.3
Q ss_pred cccCCCCCCC-CCHHHHHhhhhhhccC--CCcceecCcccccc--hhhHHHHhhhhc
Q 030491 46 DFPCPYCYED-FDIASLCSHLEDEHSC--ESKVTVCPICSVKV--ARDMLSHITLQH 97 (176)
Q Consensus 46 ~F~CPFC~e~-fDv~~L~~H~~eeH~~--e~k~vVCPICaa~~--s~d~l~HL~~rH 97 (176)
.|.|++|++. -....|..|....|.. +.++-.|++|.... ..+|..|+...|
T Consensus 18 py~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~H 74 (102)
T 2ghf_A 18 GYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYH 74 (102)
T ss_dssp SEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTS
T ss_pred CcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhc
Confidence 6999999994 4678899999877853 45678999998764 568999943334
No 50
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=95.38 E-value=0.016 Score=43.62 Aligned_cols=51 Identities=24% Similarity=0.496 Sum_probs=37.5
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcccccc--hhhHHHHhhhhcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~--s~d~l~HL~~rH~ 98 (176)
.|.|++|++ --....|..|+...+. .+...|++|.... ..+|..|+...++
T Consensus 105 ~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~L~~H~~~H~~ 158 (190)
T 2i13_A 105 PYACPECGKSFSQLAHLRAHQRTHTG--EKPYKCPECGKSFSREDNLHTHQRTHTG 158 (190)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHHHC--CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred CCcCCCCCCccCCHHHHHHHHHHhCC--CCCeECCCCCcccCCHHHHHHHHHhcCC
Confidence 588999988 4467778888876543 3567899997764 5688888877654
No 51
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.37 E-value=0.012 Score=34.71 Aligned_cols=34 Identities=21% Similarity=0.168 Sum_probs=27.0
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|++|++ --....|..|... |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2emy_A 12 PYECHECGKAFSRKYQLISHQRT-HAG-EKPSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH-HTT-SCCSCSSCC
T ss_pred CcCCCCCCcccCcHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 599999999 5567889999766 544 467889998
No 52
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.35 E-value=0.016 Score=34.07 Aligned_cols=34 Identities=24% Similarity=0.324 Sum_probs=26.6
Q ss_pred cccCCCCCCCC-CHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e~f-Dv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|++|++.| ....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2eoq_A 12 PFKCDICGKSFCGRSRLNRHSMV-HTA-EKPSGPSSG 46 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHHH-TTC-CCSSSCCCC
T ss_pred CcCCCcCCchhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 69999999954 67888999765 644 367889998
No 53
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.35 E-value=0.013 Score=40.43 Aligned_cols=50 Identities=22% Similarity=0.293 Sum_probs=39.7
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcccccc--hhhHHHHhhhhcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~--s~d~l~HL~~rH~ 98 (176)
.|.|++|++ --....|..|.. |.. .+...|++|.... ..+|..|+...|.
T Consensus 42 ~~~C~~C~~~f~~~~~l~~H~~--H~~-~~~~~C~~C~~~f~~~~~L~~H~~~~H~ 94 (107)
T 1wjp_A 42 AAVCPYCSLRFFSPELKQEHES--KCE-YKKLTCLECMRTFKSSFSIWRHQVEVHN 94 (107)
T ss_dssp SBCCTTTCCCBSSHHHHHHHHH--HCS-TGGGEEGGGTEECSSHHHHHHHHHHTSC
T ss_pred CccCCCCCCccCCHHHHHHHHH--cCC-CCCccCccccchhCCHHHHHHHHHHHcC
Confidence 599999999 446788999983 654 4678999998764 5699999986664
No 54
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.33 E-value=0.0088 Score=43.27 Aligned_cols=51 Identities=27% Similarity=0.517 Sum_probs=39.1
Q ss_pred cccCCC--CCC-CCCHHHHHhhhhhhccCCCcceecCc--ccccc--hhhHHHHhhhhcc
Q 030491 46 DFPCPY--CYE-DFDIASLCSHLEDEHSCESKVTVCPI--CSVKV--ARDMLSHITLQHG 98 (176)
Q Consensus 46 ~F~CPF--C~e-~fDv~~L~~H~~eeH~~e~k~vVCPI--Caa~~--s~d~l~HL~~rH~ 98 (176)
.|.|++ |++ -.+...|..|+.. |. +.+...|++ |.... ..+|..|+...|.
T Consensus 67 ~~~C~~~~C~~~f~~~~~l~~H~~~-h~-~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~ 124 (155)
T 2gli_A 67 PHKCTFEGCRKSYSRLENLKTHLRS-HT-GEKPYMCEHEGCSKAFSNASDRAKHQNRTHS 124 (155)
T ss_dssp CCCCCSTTCCCCCSSHHHHHHHHHH-TT-TCCCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred CccCCCCCCCCcccCHHHHHHHHHH-cC-CCCCeeCCCCCCCCccCCHHHHHHHHHHhcC
Confidence 599997 999 5567889999986 43 346789998 98764 5689999966664
No 55
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.26 E-value=0.013 Score=34.48 Aligned_cols=34 Identities=18% Similarity=0.131 Sum_probs=26.7
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|++|++ --....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ene_A 12 PYKCNECGKVFRHNSYLSRHQRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHTT-TCC-CCCCSCCCC
T ss_pred CeECCCCCchhCChHHHHHHHhh-cCC-CCCCCCCCC
Confidence 599999999 4566889999775 544 467889998
No 56
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=95.21 E-value=0.024 Score=36.60 Aligned_cols=50 Identities=22% Similarity=0.453 Sum_probs=27.5
Q ss_pred ccC--CCCCCCC-CHHHHHhhhhhhccCCCcceecCc--ccccc--hhhHHHHhhhhcc
Q 030491 47 FPC--PYCYEDF-DIASLCSHLEDEHSCESKVTVCPI--CSVKV--ARDMLSHITLQHG 98 (176)
Q Consensus 47 F~C--PFC~e~f-Dv~~L~~H~~eeH~~e~k~vVCPI--Caa~~--s~d~l~HL~~rH~ 98 (176)
|.| +.|++.| ....|..|... |.. .+...|++ |.... ..+|..|+...++
T Consensus 2 ~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 58 (85)
T 2j7j_A 2 YVCHFENCGKAFKKHNQLKVHQFS-HTQ-QLPYECPHEGCDKRFSLPSRLKRHEKVHAG 58 (85)
T ss_dssp EECCSTTCCCEESSHHHHHHHHHH-HHT-TCCEECCSTTCCCEESSHHHHHHHHHHHHS
T ss_pred ccCCCCCCCcccCCHHHHHHHHHH-hCC-CCCeeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence 566 5566633 45666666643 322 24456666 65543 4466666665555
No 57
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.17 E-value=0.016 Score=34.08 Aligned_cols=34 Identities=18% Similarity=0.194 Sum_probs=26.9
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|++|++ --....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~c 46 (46)
T 2ep2_A 12 PYECSICGKSFTKKSQLHVHQQI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHT-TSS-CCSCCSCCC
T ss_pred CcCCCCCCcccCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 699999999 5567889999864 544 367889998
No 58
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=95.15 E-value=0.016 Score=35.72 Aligned_cols=38 Identities=16% Similarity=0.333 Sum_probs=30.8
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCccccc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVK 84 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPICaa~ 84 (176)
.|.|++|++ --....|..|+...|.. .+.-.|++|...
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~~H~~-~k~~~C~~C~k~ 50 (54)
T 2eps_A 12 PYICQSCGKGFSRPDHLNGHIKQVHTS-ERPHKCQVWVSG 50 (54)
T ss_dssp CEECSSSCCEESSHHHHHHHHHHTSCC-CCCCCSSSSCCS
T ss_pred CeECCCCCcccCCHHHHHHHHHHhcCC-CCCccCCCCCCC
Confidence 699999999 44778899999877765 456899999764
No 59
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.14 E-value=0.019 Score=33.83 Aligned_cols=34 Identities=21% Similarity=0.206 Sum_probs=26.9
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|++|++ --....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ytq_A 12 PYGCSECGKAFSSKSYLIIHMRT-HSG-EKPSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCSCHHHHHHHHTT-TCC-SCSSCCCCC
T ss_pred CcCCCccChhhCChHHHHHHHHH-hCC-CCCCCCCCC
Confidence 599999999 5567889999775 543 467889998
No 60
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=95.10 E-value=0.016 Score=33.98 Aligned_cols=34 Identities=18% Similarity=0.161 Sum_probs=26.6
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|++|++ =-....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2el4_A 12 PYGCSQCAKTFSLKSQLIVHQRS-HTG-VKPSGPSSG 46 (46)
T ss_dssp SEECSSSSCEESSHHHHHHHGGG-SSS-CCCSCCTTC
T ss_pred ceECCCCCchhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 599999999 5566889999765 543 467899998
No 61
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.09 E-value=0.017 Score=34.00 Aligned_cols=34 Identities=18% Similarity=0.176 Sum_probs=26.9
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|++|++ --....|..|... |.. .++-.|+||
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~c 46 (46)
T 2ytk_A 12 PYKCNECGKVFTQNSHLTNHWRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HSS-SSCSSCCCC
T ss_pred CEeCCcCCCccCCHHHHHHHHHH-HCC-CCCCCCCCC
Confidence 699999999 4567889999875 543 467899998
No 62
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.08 E-value=0.017 Score=33.89 Aligned_cols=34 Identities=24% Similarity=0.264 Sum_probs=27.0
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|++|++ --....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2enc_A 12 PFKCEECGKGFYTNSQCYSHQRS-HSG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-SCC-SSCCSSCCC
T ss_pred CcCCCCCCCcCCChHHHHHHHHH-hCC-CCCCCCCCC
Confidence 599999999 5567889999765 644 467889998
No 63
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.02 E-value=0.016 Score=34.34 Aligned_cols=34 Identities=18% Similarity=0.117 Sum_probs=26.7
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|++|++ --....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2ytm_A 12 PYKCMECGKAFGDNSSCTQHQRL-HTG-QRPSGPSSG 46 (46)
T ss_dssp SSSBTTTTBCCSSHHHHHHHHHH-HHS-CCCCCCCCC
T ss_pred CcCCCCCCchhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 599999999 4556788999876 544 367899998
No 64
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.01 E-value=0.019 Score=33.73 Aligned_cols=34 Identities=18% Similarity=0.115 Sum_probs=26.8
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|++|++ =-....|..|... |.. .++-.|+||
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~c 46 (46)
T 2ytj_A 12 PYICAECGKAFTIRSNLIKHQKI-HTK-QKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-TSC-CCCSSCSCC
T ss_pred CeECCCCChhhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 599999999 5567889999865 543 467889998
No 65
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.01 E-value=0.021 Score=33.39 Aligned_cols=34 Identities=24% Similarity=0.215 Sum_probs=26.7
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|++|++ --....|..|.. .|.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~C 46 (46)
T 2eme_A 12 PYVCDYCGKAFGLSAELVRHQR-IHTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHG-GGCC-CSCCSSCCC
T ss_pred CeECCCCChhhCCHHHHHHHHH-hcCC-CCCCCCCCC
Confidence 599999999 556788999986 4543 456889998
No 66
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.99 E-value=0.016 Score=34.13 Aligned_cols=34 Identities=18% Similarity=0.062 Sum_probs=26.9
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|++|++ --....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2em5_A 12 SHQCHECGRGFTLKSHLNQHQRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHTT-TSC-SCCSSCCCC
T ss_pred CeECCcCCCccCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 699999999 5567889999765 643 456889998
No 67
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=94.99 E-value=0.025 Score=33.30 Aligned_cols=34 Identities=18% Similarity=0.178 Sum_probs=26.8
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|++|++ --....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2emk_A 12 PYECKECGKAFSQTTHLIQHQRV-HTG-EKPSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCSCHHHHHHHHHH-HSS-CCCSSCCCC
T ss_pred ceECCCCCchhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 599999999 5566788999865 543 467899998
No 68
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=94.93 E-value=0.037 Score=39.93 Aligned_cols=53 Identities=23% Similarity=0.263 Sum_probs=29.1
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccC-CCcceecCccc-----cc--chhhHHHHhhhhcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSC-ESKVTVCPICS-----VK--VARDMLSHITLQHG 98 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~-e~k~vVCPICa-----a~--~s~d~l~HL~~rH~ 98 (176)
.|.|+.|++ =-+...|..|+...|.. +.+..+|++|. .. -..+|..|+...++
T Consensus 3 ~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~ 64 (155)
T 2gli_A 3 DCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTG 64 (155)
T ss_dssp BCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHC
T ss_pred cCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCC
Confidence 466777777 33566677777665432 33455666533 11 13466666665443
No 69
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=94.91 E-value=0.022 Score=33.32 Aligned_cols=34 Identities=21% Similarity=0.119 Sum_probs=26.7
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|++|++ --....|..|... |.. .++..|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2em9_A 12 PYNCKECGKSFRWASCLLKHQRV-HSG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHGGG-GTS-CCCCSTTCC
T ss_pred CeECCccccccCChHHHHHHHHH-hCC-CCCCCCCCC
Confidence 699999999 4567889999765 543 467889998
No 70
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.91 E-value=0.018 Score=33.70 Aligned_cols=34 Identities=18% Similarity=0.157 Sum_probs=26.8
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|+.|++ --....|..|... |..+ ++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-~~~~C~~C 46 (46)
T 2eoe_A 12 PYKCNECGKVFTQNSHLANHQRI-HTGV-KPSGPSSG 46 (46)
T ss_dssp SSEETTTTEECSSHHHHHHHHGG-GSCC-CSCSSCCC
T ss_pred CeECCCcChhhCCHHHHHHHHHH-cCCC-CCCCCCCC
Confidence 599999999 5567888999764 5543 67899998
No 71
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=94.90 E-value=0.028 Score=42.25 Aligned_cols=52 Identities=23% Similarity=0.443 Sum_probs=41.3
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcccccc--hhhHHHHhhhhccc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHGH 99 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~--s~d~l~HL~~rH~~ 99 (176)
.|.||+|++ --+...|..|....+. .+...|++|.... ..+|..|+...++.
T Consensus 77 ~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~~ 131 (190)
T 2i13_A 77 PYKCPECGKSFSQRANLRAHQRTHTG--EKPYACPECGKSFSQLAHLRAHQRTHTGE 131 (190)
T ss_dssp CEECTTTCCEESCHHHHHHHHHHHHT--CCCEECTTTCCEESSHHHHHHHHHHHHCC
T ss_pred CccCcccCCccCCHHHHHHHHHhcCC--CCCCcCCCCCCccCCHHHHHHHHHHhCCC
Confidence 699999999 5578899999987654 4568999998764 56899999876653
No 72
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.90 E-value=0.022 Score=33.59 Aligned_cols=34 Identities=21% Similarity=0.222 Sum_probs=26.8
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|++|++ --....|..|... |. +.++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~-~~k~~~C~~c 46 (46)
T 2emf_A 12 HFECTECGKAFTRKSTLSMHQKI-HT-GEKPSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESCHHHHHHHGGG-TS-CSSCSCCCCC
T ss_pred CeECCCCCchhCCHHHHHHHHHH-hC-CCCCCCCCCC
Confidence 599999999 4567889999875 54 3467899998
No 73
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=94.88 E-value=0.034 Score=38.23 Aligned_cols=51 Identities=20% Similarity=0.338 Sum_probs=28.5
Q ss_pred cccCC--CCCC-CCCHHHHHhhhhhhccCCCcceecCcccccc--hhhHHHHhhhhcc
Q 030491 46 DFPCP--YCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (176)
Q Consensus 46 ~F~CP--FC~e-~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~--s~d~l~HL~~rH~ 98 (176)
.|.|+ .|++ --....|..|+...+ ..+...|++|.... ..+|..|+...++
T Consensus 36 ~~~C~~~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 91 (119)
T 2jp9_A 36 PYQCDFKDCERRFSRSDQLKRHQRRHT--GVKPFQCKTCQRKFSRSDHLKTHTRTHTG 91 (119)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHHHHH--CCCCEECTTTCCEESCHHHHHHHHHHHHT
T ss_pred CccCCCCCCcCccCCHHHHHHHHHHcC--CCCCccCCccCchhCCHHHHHHHHHHhcC
Confidence 46666 3666 334566666666532 23445666665543 4466666655443
No 74
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.87 E-value=0.027 Score=32.95 Aligned_cols=34 Identities=18% Similarity=0.185 Sum_probs=26.4
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|+.|++ --....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2ytr_A 12 PYKCNECGKAFSQTSKLARHQRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp TTCCTTTCCCCSSHHHHHHHHTT-TTT-CSCCCSCCC
T ss_pred CcCCCCCCCccCCHHHHHHHHHh-cCC-CCCCCCCCC
Confidence 599999999 4466788999765 544 457889998
No 75
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.86 E-value=0.023 Score=33.36 Aligned_cols=34 Identities=15% Similarity=0.139 Sum_probs=26.6
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|++|++ --....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2ytd_A 12 PYKCSECGKAFHRHTHLNEHRRI-HTG-YRPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HTC-CCSSCSSCC
T ss_pred CeECCCCCCeeCChHHHHHHHHH-cCC-CCCCCCCCC
Confidence 599999999 5566789999765 543 467899998
No 76
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.84 E-value=0.016 Score=34.02 Aligned_cols=34 Identities=18% Similarity=0.099 Sum_probs=26.5
Q ss_pred cccCCCCCCC-CCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e~-fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|++|++. -....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2epw_A 12 PCKCTECGKAFCWKSQLIMHQRT-HVD-DKHSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSSHHHHHHHHH-CCS-CCCSCCCCC
T ss_pred CeeCCCCCCccCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 5999999994 456889999865 544 467889998
No 77
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.82 E-value=0.013 Score=34.42 Aligned_cols=34 Identities=18% Similarity=0.188 Sum_probs=27.0
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|++|++ --....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2en6_A 12 PYGCNECGKTFSQKSILSAHQRT-HTG-EKPSGPSSG 46 (46)
T ss_dssp CEEETTTTEEESSHHHHHHHHHH-HSS-CCCSSSCCC
T ss_pred CeECCCCCcccCchHHHHHHHHH-cCC-CCCCCCCCC
Confidence 699999999 5567889999876 544 367889998
No 78
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.81 E-value=0.017 Score=34.05 Aligned_cols=34 Identities=21% Similarity=0.171 Sum_probs=26.7
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|++|++ =-....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2eoo_A 12 PYGCNECGKNFGRHSHLIEHLKR-HFR-EKSSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH-HHS-TTSSCCSCC
T ss_pred CEEccccCcccCCHHHHHHHHHH-HcC-CCCCCCCCC
Confidence 599999999 5567789999776 543 456889998
No 79
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.81 E-value=0.021 Score=33.53 Aligned_cols=34 Identities=21% Similarity=0.219 Sum_probs=26.7
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|++|++ --....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~c 46 (46)
T 2emh_A 12 PYICTVCGKAFTDRSNLIKHQKI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECTTTCCEESSHHHHHHHHHH-HHC-SSCSSSCCC
T ss_pred CcCCCCCCchhCCHHHHHHHHHh-cCC-CCCCCCCCC
Confidence 699999999 5566789999864 544 367889998
No 80
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.78 E-value=0.026 Score=33.04 Aligned_cols=34 Identities=21% Similarity=0.108 Sum_probs=26.7
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|++|++ --....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2eq4_A 12 LYNCKECGKSFSRAPCLLKHERL-HSG-EKPSGPSSG 46 (46)
T ss_dssp CCCBTTTTBCCSCHHHHHHHHHH-CCS-SSCCCCCCC
T ss_pred CeECCCCCCccCchHHHHHHHHh-cCC-CCCCCCCCC
Confidence 599999999 4566789999765 543 467889998
No 81
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.78 E-value=0.028 Score=32.95 Aligned_cols=34 Identities=24% Similarity=0.208 Sum_probs=26.4
Q ss_pred cccCCCCCCC-CCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e~-fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|++|++. -....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2epz_A 12 PFDCIDCGKAFSDHIGLNQHRRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SBCCTTTCCCBSSHHHHHHHHTT-TTT-CCCCSSCCC
T ss_pred CeECCCCCceeCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 5999999994 456788999864 543 467889998
No 82
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.76 E-value=0.026 Score=33.13 Aligned_cols=34 Identities=18% Similarity=0.157 Sum_probs=26.8
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|+.|++ =-....|..|... |. +.++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~-~~k~~~C~~C 46 (46)
T 2em7_A 12 PYKCEECGKGFICRRDLYTHHMV-HT-GEKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESCHHHHHHHGGG-GT-TCCCSSTTCC
T ss_pred CccCCCccchhCCHHHHHHHHHH-hC-CCCCCCCCCC
Confidence 699999999 5567889999765 54 3467889998
No 83
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=94.76 E-value=0.042 Score=35.41 Aligned_cols=47 Identities=23% Similarity=0.290 Sum_probs=38.0
Q ss_pred cccCCC--CCC-CCCHHHHHhhhhhhccCCCcceecCc---ccccc--hhhHHHHhhhhc
Q 030491 46 DFPCPY--CYE-DFDIASLCSHLEDEHSCESKVTVCPI---CSVKV--ARDMLSHITLQH 97 (176)
Q Consensus 46 ~F~CPF--C~e-~fDv~~L~~H~~eeH~~e~k~vVCPI---Caa~~--s~d~l~HL~~rH 97 (176)
.|.||+ |++ --....|..|+...+. ..|++ |...- ..+|..|+...|
T Consensus 31 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~-----~~C~~~~~C~~~f~~~~~l~~H~~~hh 85 (85)
T 2j7j_A 31 PYECPHEGCDKRFSLPSRLKRHEKVHAG-----YPCKKDDSCSFVGKTWTLYLKHVAECH 85 (85)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHHHHHS-----EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred CeeCCCCCCcCccCCHHHHHHHHHHhCC-----CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence 599999 999 5578899999977554 78999 97764 568999987655
No 84
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=94.74 E-value=0.037 Score=41.61 Aligned_cols=53 Identities=21% Similarity=0.294 Sum_probs=33.6
Q ss_pred cccCC--CCCC-CCCHHHHHhhhhhhccCCCcceec--Ccccccc--hhhHHHHhhhhcc
Q 030491 46 DFPCP--YCYE-DFDIASLCSHLEDEHSCESKVTVC--PICSVKV--ARDMLSHITLQHG 98 (176)
Q Consensus 46 ~F~CP--FC~e-~fDv~~L~~H~~eeH~~e~k~vVC--PICaa~~--s~d~l~HL~~rH~ 98 (176)
.|.|+ .|++ -.+...|..|+...|....+..+| ++|.... ..+|..|+...++
T Consensus 72 ~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~ 131 (190)
T 1tf6_A 72 NFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQ 131 (190)
T ss_dssp CEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSS
T ss_pred ceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCC
Confidence 46777 6777 556667777776666655566677 6676543 4566677665443
No 85
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.67 E-value=0.025 Score=33.09 Aligned_cols=34 Identities=21% Similarity=0.158 Sum_probs=26.8
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|++|++ --....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2emm_A 12 PHKCNECGKSFIQSAHLIQHQRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HSC-CCTTSSSCC
T ss_pred CeeCCCCChhhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 599999999 5567889999765 543 467889998
No 86
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.67 E-value=0.031 Score=32.85 Aligned_cols=34 Identities=18% Similarity=0.217 Sum_probs=26.5
Q ss_pred cccCCCCCCCC-CHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e~f-Dv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|+.|++.| ....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2elz_A 12 PYKCEDCGKGYNRRLNLDMHQRV-HMG-EKTSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHGGG-GGS-CCCCCSCCC
T ss_pred CeeCcccCchhCCHHHHHHHHHh-cCC-CCCCCCCCC
Confidence 59999999944 56889999774 543 456889998
No 87
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.67 E-value=0.028 Score=32.97 Aligned_cols=34 Identities=24% Similarity=0.194 Sum_probs=26.4
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|++|++ --....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2eml_A 12 PYECSVCGKAFSHRQSLSVHQRI-HSG-KKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHGG-GSS-CCCSCSSCC
T ss_pred CeeCCCcCCccCCHHHHHHHHHH-hcC-CCCCCCCCC
Confidence 599999999 5566788899765 543 456889998
No 88
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=94.62 E-value=0.052 Score=35.47 Aligned_cols=48 Identities=23% Similarity=0.425 Sum_probs=20.8
Q ss_pred cccCCC--CCCC-CCHHHHHhhhhhhccCCCcceecC--cccccc--hhhHHHHhhh
Q 030491 46 DFPCPY--CYED-FDIASLCSHLEDEHSCESKVTVCP--ICSVKV--ARDMLSHITL 95 (176)
Q Consensus 46 ~F~CPF--C~e~-fDv~~L~~H~~eeH~~e~k~vVCP--ICaa~~--s~d~l~HL~~ 95 (176)
.|.|++ |++. -....|..|+...+ +.+...|| +|.... ..+|..|+..
T Consensus 5 ~~~C~~~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~~~C~~~f~~~~~l~~H~~~ 59 (89)
T 2wbs_A 5 THTCDYAGCGKTYTKSSHLKAHLRTHT--GEKPYHCDWDGCGWKFARSDELTRHYRK 59 (89)
T ss_dssp CEECCSTTTCCEESSHHHHHHHHTTSC--SSCCEECCSTTTCCEESSHHHHHHHHHH
T ss_pred CeeCCCCCCCCcCCCHHHHHHHHHhcC--CCCCcCCCCCCCCCccCCHHHHHHHHHH
Confidence 455555 5552 23444555554321 12334554 354432 3344555443
No 89
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=94.61 E-value=0.023 Score=33.46 Aligned_cols=34 Identities=24% Similarity=0.289 Sum_probs=26.7
Q ss_pred cccCCCCCCCC-CHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e~f-Dv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|++|++.| ....|..|... |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ely_A 12 PFKCVECGKGFSRRSALNVHHKL-HTG-EKPSGPSSG 46 (46)
T ss_dssp SBCCSSSCCCBSSTTHHHHHHHH-HSC-CSSCSCCCC
T ss_pred CcccCccCcccCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 59999999954 56788999875 543 467899998
No 90
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=94.59 E-value=0.046 Score=38.04 Aligned_cols=51 Identities=18% Similarity=0.361 Sum_probs=39.0
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCc--ccccc--hhhHHHHhhhhcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPI--CSVKV--ARDMLSHITLQHG 98 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPI--Caa~~--s~d~l~HL~~rH~ 98 (176)
.|.|++|++ --....|..|+... . ..+...|++ |.... ..+|..|+...++
T Consensus 34 ~~~C~~C~~~f~~~~~l~~H~~~h-~-~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 89 (124)
T 1ubd_C 34 VHVCAECGKAFVESSKLKRHQLVH-T-GEKPFQCTFEGCGKRFSLDFNLRTHVRIHTG 89 (124)
T ss_dssp CEECTTTCCEESSHHHHHHHGGGT-S-CCCCEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred CeECCCCCchhCCHHHHHHHHHHc-C-CCCCeeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence 699999999 55778899998754 3 245678987 98764 5688999887665
No 91
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=94.53 E-value=0.044 Score=37.59 Aligned_cols=50 Identities=18% Similarity=0.428 Sum_probs=39.6
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcccccc--hhhHHHHhhhhcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~--s~d~l~HL~~rH~ 98 (176)
.|.| .|++ --....|..|+...+. .+...|++|.... ..+|..|+...++
T Consensus 10 ~~~C-~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 62 (110)
T 2csh_A 10 LYPC-QCGKSFTHKSQRDRHMSMHLG--LRPYGCGVCGKKFKMKHHLVGHMKIHTG 62 (110)
T ss_dssp CEEC-TTSCEESSHHHHHHHHHHHSC--CCSEECTTTSCEESSSHHHHHHHTTTCC
T ss_pred CEec-cCCCccCCHHHHHHHHHHcCC--CcCccCCCCCcccCCHHHHHHHHHHcCC
Confidence 6999 9999 5578899999986543 4568999998864 5689999987664
No 92
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=94.49 E-value=0.026 Score=33.05 Aligned_cols=35 Identities=20% Similarity=0.314 Sum_probs=27.5
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCccc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICS 82 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPICa 82 (176)
.|.|+.|++ -.....|..|... |. ..+...||+|-
T Consensus 10 ~~~C~~C~k~f~~~~~l~~H~~~-H~-~~~~~~C~~cg 45 (45)
T 2epq_A 10 PYSCPVCGLRFKRKDRMSYHVRS-HD-GSVGKSGPSSG 45 (45)
T ss_dssp SSEETTTTEECSCHHHHHHHHHH-HS-CCCCCCCCCCC
T ss_pred CCcCCCCCcccCCHHHHHHHHHH-cc-CCCCCCCcCCC
Confidence 699999999 4577889999876 44 35678999993
No 93
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.47 E-value=0.011 Score=40.95 Aligned_cols=52 Identities=15% Similarity=0.233 Sum_probs=34.6
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhh-ccCCCcceecCccccc----chhhHHHHhhhhc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDE-HSCESKVTVCPICSVK----VARDMLSHITLQH 97 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~ee-H~~e~k~vVCPICaa~----~s~d~l~HL~~rH 97 (176)
.|.|+.|++ -.....|..|+... |..+.....|++|... -..+|..|+...+
T Consensus 19 ~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~ 76 (115)
T 2dmi_A 19 KFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKED 76 (115)
T ss_dssp SEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCC
T ss_pred CEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccC
Confidence 599999999 55678889998851 3223334458998753 2457777776544
No 94
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.45 E-value=0.02 Score=33.59 Aligned_cols=34 Identities=21% Similarity=0.183 Sum_probs=26.2
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|++|++ --....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ytg_A 12 PFKCGECGKSYNQRVHLTQHQRV-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECTTTCCEESSSHHHHTTGGG-GSS-CCSSCSCCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 699999999 4456788999754 543 467889998
No 95
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.37 E-value=0.025 Score=33.18 Aligned_cols=34 Identities=21% Similarity=0.134 Sum_probs=26.9
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|++|++ --....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2emp_A 12 PYMCNECGKAFSVYSSLTTHQVI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESCHHHHHHHHHH-HHC-CSCCSCCCC
T ss_pred CeECCCCCchhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 599999999 5567889999875 543 467889998
No 96
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=94.35 E-value=0.036 Score=32.58 Aligned_cols=34 Identities=18% Similarity=0.151 Sum_probs=26.7
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|++|++ --....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2el6_A 12 PYKCSQCEKSFSGKLRLLVHQRM-HTR-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSSCEESSHHHHHHHHGG-GCC-SSCCSCCCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 599999999 5567889999765 544 456889998
No 97
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.35 E-value=0.024 Score=33.31 Aligned_cols=34 Identities=24% Similarity=0.208 Sum_probs=26.5
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|+.|++ --....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2en1_A 12 PFKCEECGKRFTQNSQLHSHQRV-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEEETTTTEEESSHHHHHHHGGG-GSC-CCCSCCCCC
T ss_pred CeeCCCCCcccCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 599999999 5566788999865 544 467889998
No 98
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.33 E-value=0.038 Score=32.37 Aligned_cols=34 Identities=26% Similarity=0.222 Sum_probs=26.6
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|+.|++ =-....|..|... |. +.++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~-~~k~~~C~~C 46 (46)
T 2yso_A 12 SHQCRECGEIFFQYVSLIEHQVL-HM-GQKNSGPSSG 46 (46)
T ss_dssp CEECTTTCCEESSHHHHHHHHHH-HS-CCSCCCTTCC
T ss_pred CEEccccChhhCCHHHHHHHHHH-hC-CCCCCCCCCC
Confidence 699999999 4457889999765 54 3466889998
No 99
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.32 E-value=0.021 Score=33.57 Aligned_cols=34 Identities=15% Similarity=0.129 Sum_probs=26.8
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|+.|++ =-....|..|... |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2ysp_A 12 PYKCEKCGKGYNSKFNLDMHQKV-HTG-ERPSGPSSG 46 (46)
T ss_dssp SEEETTTTEEESCHHHHHHHHTT-SCS-CCSSCCSCC
T ss_pred CeECCCCCCccCCHHHHHHHHHh-hCC-CCCCCCCCC
Confidence 699999999 5567889999765 543 467889998
No 100
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.32 E-value=0.03 Score=32.81 Aligned_cols=34 Identities=21% Similarity=0.145 Sum_probs=26.8
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|++|++ --....|..|... |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ep0_A 12 PYKCDVCHKSFRYGSSLTVHQRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHTT-TSS-SCCCSCCCC
T ss_pred CeeCcccCcccCChHHHHHHHHH-hCC-CCCCCCCCC
Confidence 599999999 5567889999764 543 467889998
No 101
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.30 E-value=0.026 Score=33.19 Aligned_cols=34 Identities=18% Similarity=0.123 Sum_probs=26.7
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|+.|++ --....|..|... |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2em8_A 12 PYKCVECGKGYKRRLDLDFHQRV-HTG-EKLSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HHC-CCCCCSCCC
T ss_pred CeECcccCchhCCHHHHHHHHHH-HcC-CCCCCCCCC
Confidence 699999999 5566889999875 543 456889998
No 102
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.29 E-value=0.026 Score=33.22 Aligned_cols=34 Identities=18% Similarity=0.155 Sum_probs=26.6
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|++|++ --....|..|... |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ytt_A 12 PYQCSECGKSFSGSYRLTQHWIT-HTR-EKPSGPSSG 46 (46)
T ss_dssp TTCCSSSCCCCSSHHHHHHHHTH-HHH-CCCCSCCCC
T ss_pred CeeCCCCCcccCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 699999999 5567889999876 443 356789998
No 103
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.29 E-value=0.034 Score=32.47 Aligned_cols=34 Identities=21% Similarity=0.149 Sum_probs=26.3
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|++|++ --....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2en8_A 12 SHTCDECGKNFCYISALRIHQRV-HMG-EKCSGPSSG 46 (46)
T ss_dssp SEECTTTCCEESSHHHHHHHHTT-TCC-SCSSCCSCC
T ss_pred CeECCCcCcccCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 599999999 4467888999754 543 457889988
No 104
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.20 E-value=0.037 Score=32.12 Aligned_cols=34 Identities=21% Similarity=0.212 Sum_probs=26.7
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|+.|++ --....|..|... |.. .+.-.|++|
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 44 (44)
T 2emx_A 10 PFGCSCCEKAFSSKSYLLVHQQT-HAE-EKPSGPSSG 44 (44)
T ss_dssp CEECSSSSCEESSHHHHHHHHHH-HTS-SCSCSCCCC
T ss_pred CccCCCCCcccCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 599999999 5567889999875 543 466889988
No 105
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.08 E-value=0.038 Score=32.38 Aligned_cols=34 Identities=21% Similarity=0.239 Sum_probs=26.3
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|++|++ --....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~~ 46 (46)
T 2ep3_A 12 PYRCAECGKAFTDRSNLFTHQKI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHTT-TTT-SCCCCTTCC
T ss_pred CeECCCCCchhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 599999999 5566789999864 543 467889987
No 106
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.08 E-value=0.044 Score=32.18 Aligned_cols=34 Identities=26% Similarity=0.238 Sum_probs=26.4
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|++|++ --....|..|... |.. .++-.|+||
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~~ 46 (46)
T 2em2_A 12 PFKCKECGKAFRQNIHLASHLRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HCC-CCSSCSSCC
T ss_pred CEECCcCCchhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 699999999 5567889999765 543 467889987
No 107
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=94.04 E-value=0.14 Score=34.09 Aligned_cols=51 Identities=16% Similarity=0.373 Sum_probs=38.9
Q ss_pred CcccCCC--CCC-CCCHHHHHhhhhhhccCCCcceecCcccccc--hhhHHHHhhhhc
Q 030491 45 PDFPCPY--CYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQH 97 (176)
Q Consensus 45 ~~F~CPF--C~e-~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~--s~d~l~HL~~rH 97 (176)
..|.||+ |++ --....|..|+...+. .+...|++|.... ..+|..|+...+
T Consensus 44 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~H~ 99 (100)
T 2ebt_A 44 KPYKCTWEGCDWRFARSDELTRHYRKHTG--AKPFQCGVCNRSFSRSDHLALHMKRHQ 99 (100)
T ss_dssp CCEECCSSSCCCEESSHHHHHHHHHHHTS--CCSCBCSSSCCBCSSHHHHHHHHHHHC
T ss_pred CCeeCCCCCCCCccCCHHHHHHHHHHhCC--CCCeECCCCcCccCCHHHHHHHHHHhC
Confidence 3699986 999 5577899999976433 4568999998764 568999987543
No 108
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=94.04 E-value=0.028 Score=33.57 Aligned_cols=36 Identities=25% Similarity=0.225 Sum_probs=28.2
Q ss_pred CcccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCccc
Q 030491 45 PDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICS 82 (176)
Q Consensus 45 ~~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPICa 82 (176)
..|.|++|++ --....|..|... |.. .++-.|++|.
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C~ 47 (48)
T 2epr_A 11 KQVACEICGKIFRDVYHLNRHKLS-HSG-EKPYSSGPSS 47 (48)
T ss_dssp CSEEETTTTEEESSHHHHHHHGGG-SCS-CCCCCSCCCC
T ss_pred cCeeCCCCCcccCCHHHHHHHHHh-cCC-CCCccCCCCC
Confidence 4699999999 4567889999765 543 4678999995
No 109
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=93.94 E-value=0.049 Score=40.48 Aligned_cols=52 Identities=25% Similarity=0.386 Sum_probs=42.1
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcccccc--hhhHHHHhhhhccc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHGH 99 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~--s~d~l~HL~~rH~~ 99 (176)
.|.|++|++ =-....|..|.. .|.. .++..|++|...- ..+|..|+...|+-
T Consensus 50 ~~~C~~C~k~F~~~~~L~~H~~-~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~hh~~ 104 (133)
T 2lt7_A 50 KYPCRYCEKVFPLAEYRTKHEI-HHTG-ERRYQCLACGKSFINYQFMSSHIKSVHSQ 104 (133)
T ss_dssp CEECSSSSCEESSHHHHHHHHH-HHHT-CCCEEESSSCCEESSHHHHHHHHHHHTCC
T ss_pred CeeCCccCeecccccchhhhcc-ccCC-CccccCCCCCCCcCCHHHHHHHhHHhcCC
Confidence 599999999 456788999976 4654 4578999998764 67999999999874
No 110
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=93.88 E-value=0.088 Score=34.34 Aligned_cols=49 Identities=16% Similarity=0.345 Sum_probs=37.0
Q ss_pred CcccCCC--CCC-CCCHHHHHhhhhhhccCCCcceecCcccccc--hhhHHHHhhh
Q 030491 45 PDFPCPY--CYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITL 95 (176)
Q Consensus 45 ~~F~CPF--C~e-~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~--s~d~l~HL~~ 95 (176)
..|.||+ |+. --....|..|... |.. .+...|++|.... ..+|..|+..
T Consensus 34 ~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~ 87 (89)
T 2wbs_A 34 KPYHCDWDGCGWKFARSDELTRHYRK-HTG-HRPFQCQKCDRAFSRSDHLALHMKR 87 (89)
T ss_dssp CCEECCSTTTCCEESSHHHHHHHHHH-HHC-CCCEECSSSSCEESSHHHHHHHGGG
T ss_pred CCcCCCCCCCCCccCCHHHHHHHHHH-cCC-CCCccCCCCCcccCCHHHHHHHHHh
Confidence 3699986 999 4477889999865 443 3568999998764 5688888753
No 111
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.70 E-value=0.032 Score=32.73 Aligned_cols=34 Identities=18% Similarity=0.172 Sum_probs=26.2
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|+.|++ --....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2yu8_A 12 PYKCNECGKVFTQNSHLARHRRV-HTG-GKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSSHHHHHHTHH-HHS-CCCSCSCCC
T ss_pred CeECCcCCchhCCHHHHHHHHHh-cCC-CCCCCCCCC
Confidence 699999999 4456788899764 544 367889998
No 112
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=93.65 E-value=0.089 Score=38.08 Aligned_cols=52 Identities=19% Similarity=0.291 Sum_probs=40.0
Q ss_pred cccCCCCCCC-CCHHHHHhhhhhhccCCCcceecCc--ccccc--hhhHHHHhhhhccc
Q 030491 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPI--CSVKV--ARDMLSHITLQHGH 99 (176)
Q Consensus 46 ~F~CPFC~e~-fDv~~L~~H~~eeH~~e~k~vVCPI--Caa~~--s~d~l~HL~~rH~~ 99 (176)
.|.|++|++. -+...|..|+...+. .+...|++ |.... ..+|..|+...++.
T Consensus 62 ~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~ 118 (155)
T 2rpc_A 62 WEECPREGKSFKAKYKLVNHIRVHTG--EKPFPCPFPGCGKIFARSENLKIHKRTHTGE 118 (155)
T ss_dssp BTTCTTSSCCCSSHHHHHHHTHHHHC--CCSEECSCTTTCCEESCHHHHHHHHTTTCSS
T ss_pred ccCCCCcccccCCHHHHHHHHHhcCC--CCcccCCcCCCCCccCCHHHHHHHHHhhCCC
Confidence 3899999994 467889999986543 45689998 98764 56899999876653
No 113
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=93.40 E-value=0.22 Score=31.59 Aligned_cols=49 Identities=20% Similarity=0.404 Sum_probs=36.8
Q ss_pred CCcccCCC--CCC-CCCHHHHHhhhhhhccCCCcceecCc--ccccc--hhhHHHHhh
Q 030491 44 RPDFPCPY--CYE-DFDIASLCSHLEDEHSCESKVTVCPI--CSVKV--ARDMLSHIT 94 (176)
Q Consensus 44 r~~F~CPF--C~e-~fDv~~L~~H~~eeH~~e~k~vVCPI--Caa~~--s~d~l~HL~ 94 (176)
...|.|++ |++ --....|..|... |. +.+...|++ |.... ..+|..|+.
T Consensus 15 ~~~~~C~~~~C~k~f~~~~~L~~H~~~-H~-~~~~~~C~~~~C~k~f~~~~~l~~H~~ 70 (72)
T 2epa_A 15 IRSHICSHPGCGKTYFKSSHLKAHTRT-HT-GEKPFSCSWKGCERRFARSDELSRHRR 70 (72)
T ss_dssp CCCEECSSTTTCCEESSHHHHHHHHHH-HS-SSCSEECCCTTCCCEESSHHHHHHHTT
T ss_pred cCceeCCCCCCccccCCHHHHHHHHHh-cC-CCCCccCCCCCCCcccCCHHHHHhHhh
Confidence 45799999 999 5567889999975 43 346789976 98764 567888874
No 114
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.25 E-value=0.027 Score=38.97 Aligned_cols=54 Identities=15% Similarity=0.114 Sum_probs=40.8
Q ss_pred CCcccCCCCCCCC---CHHHHHhhhhhhccCCCcceecCcccccc--hhhHHHHhhhhccc
Q 030491 44 RPDFPCPYCYEDF---DIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHGH 99 (176)
Q Consensus 44 r~~F~CPFC~e~f---Dv~~L~~H~~eeH~~e~k~vVCPICaa~~--s~d~l~HL~~rH~~ 99 (176)
+..+.|++|+..| ....|..|... |.. .++..|++|.... ..+|..|+...|..
T Consensus 48 ~~~~~C~~C~~~f~f~~~~~l~~H~~~-H~~-~~~~~C~~C~k~f~~~~~L~~H~~~hh~~ 106 (115)
T 2dmi_A 48 DNHETDNNNPKRWSKPRKRSLLEMEGK-EDA-QKVLKCMYCGHSFESLQDLSVHMIKTKHY 106 (115)
T ss_dssp SCCCCCCCCCSCCSSCCCCCCCCCCCS-CCC-CSSCBCSSSCCBCSSHHHHHHHHHHTTTT
T ss_pred CCCccCCCCCcccccccHHHHHHHhhc-cCC-CcceECCCCCCccCCHHHHHHHHHHhCCc
Confidence 4456799999976 67788889765 443 4668999998764 57899999877754
No 115
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=93.25 E-value=0.13 Score=35.16 Aligned_cols=51 Identities=24% Similarity=0.509 Sum_probs=39.9
Q ss_pred cccCCC--CCC-CCCHHHHHhhhhhhccCCCcceecC--cccccc--hhhHHHHhhhhcc
Q 030491 46 DFPCPY--CYE-DFDIASLCSHLEDEHSCESKVTVCP--ICSVKV--ARDMLSHITLQHG 98 (176)
Q Consensus 46 ~F~CPF--C~e-~fDv~~L~~H~~eeH~~e~k~vVCP--ICaa~~--s~d~l~HL~~rH~ 98 (176)
.|.|++ |++ -.+...|..|+...+. .+...|+ +|.... ..+|..|+...++
T Consensus 6 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 63 (119)
T 2jp9_A 6 PFMCAYPGCNKRYFKLSHLQMHSRKHTG--EKPYQCDFKDCERRFSRSDQLKRHQRRHTG 63 (119)
T ss_dssp CBCCCSTTSCCCBSCHHHHHHHHHHHHT--TCCEECCSTTCCCEESSHHHHHHHHHHHHC
T ss_pred eeeCCCCCCcchhCCHHHHHHHHHhhCC--CCCccCCCCCCcCccCCHHHHHHHHHHcCC
Confidence 699998 999 5578899999985433 4568999 798764 5789999987654
No 116
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=92.43 E-value=0.058 Score=34.36 Aligned_cols=36 Identities=22% Similarity=0.471 Sum_probs=26.6
Q ss_pred cccCCCCCCCCCHHHHHhhhhhhccCCCcceecCcccccc
Q 030491 46 DFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKV 85 (176)
Q Consensus 46 ~F~CPFC~e~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~ 85 (176)
.|.||.|++.|....-.. ..|.. .+...|++|....
T Consensus 14 ~~~C~~C~k~F~~~~~l~---~~H~~-~k~~~C~~C~k~f 49 (62)
T 1vd4_A 14 SFKCPVCSSTFTDLEANQ---LFDPM-TGTFRCTFCHTEV 49 (62)
T ss_dssp EEECSSSCCEEEHHHHHH---HEETT-TTEEBCSSSCCBC
T ss_pred CccCCCCCchhccHHHhH---hhcCC-CCCEECCCCCCcc
Confidence 699999999887655333 55654 4678999997653
No 117
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.15 E-value=0.15 Score=29.53 Aligned_cols=33 Identities=21% Similarity=0.339 Sum_probs=24.6
Q ss_pred cccCCCCCCCC-CHHHHHhhhhhhccCCCcceecCc
Q 030491 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPI 80 (176)
Q Consensus 46 ~F~CPFC~e~f-Dv~~L~~H~~eeH~~e~k~vVCPI 80 (176)
.|.|++|++.| ....|..|... |..+ ++-.|+|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2ep1_A 12 PYECSDCGKSFIKKSQLHVHQRI-HTGE-NPSGPSS 45 (46)
T ss_dssp SSCCSSSCCCCSSHHHHHHHHGG-GSSS-CCCSSSC
T ss_pred CcCCCCCCchhCCHHHHHHHHHH-hCCC-CCCCCCC
Confidence 59999999954 66788899875 5443 5677875
No 118
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.08 E-value=0.12 Score=30.15 Aligned_cols=33 Identities=21% Similarity=0.303 Sum_probs=24.7
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPI 80 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPI 80 (176)
.|.|++|++ --....|..|... |.. .++-.|+|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~~~~~C~~ 45 (46)
T 2em3_A 12 PYECKVCSKAFTQKAHLAQHQKT-HTG-EKPSGPSS 45 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HCC-CCCCCSCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-hCC-CCCCCCCC
Confidence 599999999 5567788899865 544 35677875
No 119
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=92.06 E-value=0.15 Score=38.25 Aligned_cols=51 Identities=20% Similarity=0.331 Sum_probs=40.1
Q ss_pred cccC--CCCCC-CCCHHHHHhhhhhhccCCCcceecCc--ccccc--hhhHHHHhhhhcc
Q 030491 46 DFPC--PYCYE-DFDIASLCSHLEDEHSCESKVTVCPI--CSVKV--ARDMLSHITLQHG 98 (176)
Q Consensus 46 ~F~C--PFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPI--Caa~~--s~d~l~HL~~rH~ 98 (176)
.|.| +.|++ --....|..|+.. |.. .+...||+ |...- ..+|..|+...+|
T Consensus 104 ~~~C~~~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~ 161 (190)
T 1tf6_A 104 VYVCHFENCGKAFKKHNQLKVHQFS-HTQ-QLPYECPHEGCDKRFSLPSRLKRHEKVHAG 161 (190)
T ss_dssp CCEECSSSSCEECSSHHHHHHHHGG-GSS-SCSSBCCSSSCCCBCSSHHHHHHHHTSSCS
T ss_pred eeeCCCCCCccccCCHHHHHHHHHH-hCC-CCCccCCCCCCCchhcCHHHHHHHHHHhCC
Confidence 6999 77999 5678899999876 433 45688988 98764 5789999987766
No 120
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.99 E-value=0.052 Score=35.56 Aligned_cols=46 Identities=17% Similarity=0.532 Sum_probs=28.7
Q ss_pred CCCCCcccCCCCCCCCCHH-H------HHhhhhhhccCC-CcceecCcccccch
Q 030491 41 DDVRPDFPCPYCYEDFDIA-S------LCSHLEDEHSCE-SKVTVCPICSVKVA 86 (176)
Q Consensus 41 dd~r~~F~CPFC~e~fDv~-~------L~~H~~eeH~~e-~k~vVCPICaa~~s 86 (176)
++....+.||.|.+.+... . +|..|....... .....||+|...+.
T Consensus 15 ~~~~~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~ 68 (73)
T 2ysl_A 15 NKLQEEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVR 68 (73)
T ss_dssp CCCCCCCBCTTTCSBCSSEEECTTCCEEEHHHHHHHCSSSCSCCCCSSSCCCCC
T ss_pred HhCccCCEeccCCcccCCeEEcCCCChhhHHHHHHHHHcCCCCCCCCCCCCcCC
Confidence 3556789999998855532 1 123344444332 35678999988764
No 121
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=91.89 E-value=0.12 Score=31.82 Aligned_cols=27 Identities=30% Similarity=0.516 Sum_probs=23.8
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCC
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCE 72 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e 72 (176)
-|.||.|-+ =-+...|..|-+..|..+
T Consensus 5 GFiCP~C~~~l~s~~~L~~Hye~~H~~~ 32 (34)
T 3mjh_B 5 GFICPQCMKSLGSADELFKHYEAVHDAG 32 (34)
T ss_dssp EEECTTTCCEESSHHHHHHHHHHHTSSS
T ss_pred ccCCcHHHHHcCCHHHHHHHHHhccccC
Confidence 599999999 567889999999999865
No 122
>2jr7_A DPH3 homolog; DESR1, CSL zinc finger, metal binding protein; NMR {Homo sapiens}
Probab=91.71 E-value=0.068 Score=39.29 Aligned_cols=47 Identities=32% Similarity=0.766 Sum_probs=32.6
Q ss_pred cccCCCCCCCCCC-CCCcccCCCCCC--CCCHHHHHhhhhhhccCCCcceecCcccccc
Q 030491 30 DRLSIDDFEVEDD-VRPDFPCPYCYE--DFDIASLCSHLEDEHSCESKVTVCPICSVKV 85 (176)
Q Consensus 30 d~~g~d~~~~ddd-~r~~F~CPFC~e--~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~ 85 (176)
|.+.+||++-|++ ..-.|+|| ||. .++...|-. ..-.|.||-|+-.+
T Consensus 6 deV~LeDm~~de~~~~y~ypCr-CGd~F~IteedLe~--------ge~iv~C~sCSL~I 55 (89)
T 2jr7_A 6 DEVEIEDFQYDEDSETYFYPCP-CGDNFSITKEDLEN--------GEDVATCPSCSLII 55 (89)
T ss_dssp CEEETTTSEEETTTTEEEEECT-TSSEEEEEHHHHHH--------TCCEEECTTTCCEE
T ss_pred eEEEHHHcEEcCCCCEEEEcCC-CCCEEEECHHHHhC--------CCEEEECCCCccEE
Confidence 3455666664433 34579999 999 777888853 12368899999876
No 123
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.52 E-value=0.21 Score=29.00 Aligned_cols=33 Identities=21% Similarity=0.301 Sum_probs=24.2
Q ss_pred cccCCCCCCC-CCHHHHHhhhhhhccCCCcceecCc
Q 030491 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPI 80 (176)
Q Consensus 46 ~F~CPFC~e~-fDv~~L~~H~~eeH~~e~k~vVCPI 80 (176)
.|.|++|++. -....|..|... |..+ ++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2eq2_A 12 PYQCNECGKAFSQTSKLARHQRV-HTGE-KPSGPSS 45 (46)
T ss_dssp SSSCCSSCCCCSSHHHHHHHGGG-GCCC-CCCCCCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-cCCC-CCCCCCC
Confidence 5999999994 456788899764 5443 5667775
No 124
>1wge_A Hypothetical protein 2610018L09RIK; diphthamide,CSL zinc finger, ADP-ribosylating toxin, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.17.1
Probab=90.96 E-value=0.1 Score=37.73 Aligned_cols=47 Identities=32% Similarity=0.767 Sum_probs=32.2
Q ss_pred cccCCCCCCCCCCC-CCcccCCCCCC--CCCHHHHHhhhhhhccCCCcceecCcccccc
Q 030491 30 DRLSIDDFEVEDDV-RPDFPCPYCYE--DFDIASLCSHLEDEHSCESKVTVCPICSVKV 85 (176)
Q Consensus 30 d~~g~d~~~~ddd~-r~~F~CPFC~e--~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~ 85 (176)
|.+.+||++-+++. .-.|+|| ||. .++...|.. ..-.|.||-|+-.+
T Consensus 13 dev~LeDm~~de~~~~y~y~Cr-CGd~F~it~edL~~--------ge~iv~C~sCSL~I 62 (83)
T 1wge_A 13 DEVEIEDFQYDEDSETYFYPCP-CGDNFAITKEDLEN--------GEDVATCPSCSLII 62 (83)
T ss_dssp CEEEGGGSCCBTTTTEEEECCS-SSSCEEEEHHHHHT--------TCCEEECTTTCCEE
T ss_pred EEEEHHHceEccCCCEEEEeCC-CCCEEEECHHHHhC--------CCEEEECCCCceEE
Confidence 34556666654433 4579999 998 777777752 12368899999875
No 125
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.91 E-value=0.2 Score=29.13 Aligned_cols=33 Identities=18% Similarity=0.240 Sum_probs=24.0
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPI 80 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPI 80 (176)
.|.|++|++ =-....|..|... |.. .+.-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2emi_A 12 HYECSECGKAFIQKSTLSMHQRI-HRG-EKPSGPSS 45 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHGG-GCS-CCCCSCCC
T ss_pred CCCCCCCCcccCCHHHHHHHHhH-hCC-CCCCCCCC
Confidence 599999999 4456888899765 543 35667765
No 126
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.59 E-value=0.26 Score=28.60 Aligned_cols=33 Identities=18% Similarity=0.180 Sum_probs=23.9
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPI 80 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPI 80 (176)
.|.|++|++ =-....|..|.. .|.. .++-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~-~k~~~C~~ 45 (46)
T 2enf_A 12 PYKCNECGKVFTQNSHLVRHRG-IHTG-EKPSGPSS 45 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHHT-TTTT-SSCCCCSC
T ss_pred CeECCCCCcccCCHHHHHHHHH-hhCC-CCCCCCCC
Confidence 599999999 445677888975 4543 35677775
No 127
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.49 E-value=0.25 Score=28.70 Aligned_cols=33 Identities=21% Similarity=0.293 Sum_probs=23.7
Q ss_pred cccCCCCCCCC-CHHHHHhhhhhhccCCCcceecCc
Q 030491 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPI 80 (176)
Q Consensus 46 ~F~CPFC~e~f-Dv~~L~~H~~eeH~~e~k~vVCPI 80 (176)
.|.|++|++.| ....|..|.. .|.. .++-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~-~k~~~C~~ 45 (46)
T 2yti_A 12 PYKCNECGKVFTQNSHLARHRG-IHTG-EKPSGPSS 45 (46)
T ss_dssp TTCCSSSCCCCSSHHHHHHHHT-TTSC-SCCSSTTC
T ss_pred CeECCCCCcccCChhHHHHHhH-hcCC-CCCCCCCC
Confidence 59999999944 5677888965 4544 35667775
No 128
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.49 E-value=0.28 Score=28.57 Aligned_cols=33 Identities=27% Similarity=0.311 Sum_probs=23.8
Q ss_pred cccCCCCCCC-CCHHHHHhhhhhhccCCCcceecCc
Q 030491 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPI 80 (176)
Q Consensus 46 ~F~CPFC~e~-fDv~~L~~H~~eeH~~e~k~vVCPI 80 (176)
.|.|+.|++. -....|..|... |..+ ++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2yth_A 12 PFQCEECGKRFTQNSHLHSHQRV-HTGE-KPSGPSS 45 (46)
T ss_dssp SBCCSSSCCCBSSHHHHHHHGGG-GTTC-CCSSCCC
T ss_pred CCCCCCCCcccCCHHHHHHHHHh-cCCC-CCCCCCC
Confidence 5999999994 466788899764 5443 5667764
No 129
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.36 E-value=0.23 Score=29.06 Aligned_cols=33 Identities=18% Similarity=0.182 Sum_probs=24.1
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPI 80 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPI 80 (176)
.|.|+.|++ =-....|..|... |.. .+.-.||+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2eon_A 12 PYKCQVCGKAFRVSSHLVQHHSV-HSG-ERPSGPSS 45 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHTTT-TTS-CCSCTTSC
T ss_pred ccCCCCCCcccCcHHHHHHHHHh-cCC-CCCCCCCC
Confidence 699999999 4556778899764 544 35677775
No 130
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=90.30 E-value=0.19 Score=26.09 Aligned_cols=27 Identities=26% Similarity=0.509 Sum_probs=20.0
Q ss_pred cccCCCCCCCC-CHHHHHhhhhhhccCC
Q 030491 46 DFPCPYCYEDF-DIASLCSHLEDEHSCE 72 (176)
Q Consensus 46 ~F~CPFC~e~f-Dv~~L~~H~~eeH~~e 72 (176)
.|.|+.|+..| ....|..|+...|..+
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~ 29 (30)
T 1paa_A 2 AYACGLCNRAFTRRDLLIRHAQKIHSGN 29 (30)
T ss_dssp CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred CcCCcccCcccCChHHHHHHHHHHccCC
Confidence 48899999955 5578888966666543
No 131
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.21 E-value=0.3 Score=28.34 Aligned_cols=33 Identities=21% Similarity=0.291 Sum_probs=24.2
Q ss_pred cccCCCCCCCC-CHHHHHhhhhhhccCCCcceecCc
Q 030491 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPI 80 (176)
Q Consensus 46 ~F~CPFC~e~f-Dv~~L~~H~~eeH~~e~k~vVCPI 80 (176)
.|.|++|++.| ....|..|... |.. .+.-.|+|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~ 45 (46)
T 2emg_A 12 PFICSECGKVFTHKTNLIIHQKI-HTG-ERPSGPSS 45 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHTT-TSC-CCCSCSCC
T ss_pred CEECCccCcccCCHHHHHHHHHH-hCC-CCCCCCCC
Confidence 59999999944 56788999764 543 35667775
No 132
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.06 E-value=0.27 Score=28.41 Aligned_cols=33 Identities=24% Similarity=0.223 Sum_probs=24.4
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPI 80 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPI 80 (176)
.|.|++|++ --....|..|... |.. .++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2eow_A 12 PYKCNECGKAFRARSSLAIHQAT-HSG-EKPSGPSS 45 (46)
T ss_dssp CEECTTSCCEESSHHHHHHHHHH-HCC-CSCSCTTC
T ss_pred CeeccccCChhcCHHHHHHHHHH-cCC-CCCCCCCC
Confidence 599999999 5567788899865 544 35677775
No 133
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=90.00 E-value=0.38 Score=33.35 Aligned_cols=37 Identities=19% Similarity=0.225 Sum_probs=27.4
Q ss_pred CCCCcccCCCCC------------CCCCHHHHHhhhhhhccCCCcceecCcccccc
Q 030491 42 DVRPDFPCPYCY------------EDFDIASLCSHLEDEHSCESKVTVCPICSVKV 85 (176)
Q Consensus 42 d~r~~F~CPFC~------------e~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~ 85 (176)
+....|.||.|. -.|+...+..++.. ...||+|....
T Consensus 10 ~~p~~~~CpI~~~~m~dPV~~~cGhtf~r~~I~~~l~~-------~~~cP~~~~~l 58 (85)
T 2kr4_A 10 DAPDEFRDPLMDTLMTDPVRLPSGTVMDRSIILRHLLN-------SPTDPFNRQML 58 (85)
T ss_dssp TCCTTTBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHH-------CSBCTTTCCBC
T ss_pred cCchheECcccCchhcCCeECCCCCEECHHHHHHHHhc-------CCCCCCCcCCC
Confidence 456789999984 35677777777763 35899998764
No 134
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=89.97 E-value=0.2 Score=35.01 Aligned_cols=29 Identities=31% Similarity=0.724 Sum_probs=25.5
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESK 74 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k 74 (176)
.|.|++|++ =.....|..|++..|..|.+
T Consensus 56 ~~~C~~C~k~F~~~~~L~~H~~~~H~~E~R 85 (85)
T 2lv2_A 56 VFPCKYCPATFYSSPGLTRHINKCHPSENR 85 (85)
T ss_dssp SEECTTSSCEESSHHHHHHHHHTTCTTCCC
T ss_pred ccCCCCCCCEeCCHHHHHHhCcccCcCCCC
Confidence 699999999 55888999999999998764
No 135
>1yop_A KTI11P; zinc finger, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: g.41.17.1 PDB: 1yws_A
Probab=89.77 E-value=0.087 Score=38.16 Aligned_cols=47 Identities=32% Similarity=0.784 Sum_probs=32.0
Q ss_pred cccCCCCCCCCCC-CCCcccCCCCCC--CCCHHHHHhhhhhhccCCCcceecCcccccc
Q 030491 30 DRLSIDDFEVEDD-VRPDFPCPYCYE--DFDIASLCSHLEDEHSCESKVTVCPICSVKV 85 (176)
Q Consensus 30 d~~g~d~~~~ddd-~r~~F~CPFC~e--~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~ 85 (176)
|.+.+||++-|++ ..-.|+|| ||. .++...|.. .--.+.||-|+-.+
T Consensus 6 dev~leDm~~de~~~~y~ypCr-CGd~F~it~edL~~--------ge~iv~C~sCSL~I 55 (83)
T 1yop_A 6 DEIEIEDMTFEPENQMFTYPCP-CGDRFQIYLDDMFE--------GEKVAVCPSCSLMI 55 (83)
T ss_dssp BCCBGGGSEEETTTTEEEEEET-TTEEEEEEHHHHHT--------TCCEEECSSSCCEE
T ss_pred eEEEHHHcEEcCCCCEEEEeCC-CCCeEEECHHHHhC--------CCEEEECCCCccEE
Confidence 3445666554433 34579999 998 777777742 23468899999876
No 136
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.72 E-value=0.28 Score=28.38 Aligned_cols=33 Identities=18% Similarity=0.193 Sum_probs=24.1
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPI 80 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPI 80 (176)
.|.|++|++ --....|..|.. .|.. .++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~p~~C~~ 45 (46)
T 2yts_A 12 PYICNECGKSFIQKSHLNRHRR-IHTG-EKPSGPSS 45 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHGG-GTSS-CCSSCCCC
T ss_pred CEECCCCChhhCChHHHHHHHH-hcCC-CCCcCCCC
Confidence 599999999 556778889975 4543 35667775
No 137
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=89.67 E-value=0.46 Score=34.08 Aligned_cols=38 Identities=18% Similarity=0.232 Sum_probs=26.5
Q ss_pred CCCCCcccCCCCCC-------------CCCHHHHHhhhhhhccCCCcceecCcccccc
Q 030491 41 DDVRPDFPCPYCYE-------------DFDIASLCSHLEDEHSCESKVTVCPICSVKV 85 (176)
Q Consensus 41 dd~r~~F~CPFC~e-------------~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~ 85 (176)
.+.+..|.||.|.+ .|+..-+..++.. ...||+|....
T Consensus 17 ~~~p~~~~CpI~~~~m~dPV~~~cG~htf~r~cI~~~l~~-------~~~cP~~~~~l 67 (98)
T 1wgm_A 17 ADACDEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLS-------DQTDPFNRSPL 67 (98)
T ss_dssp CSCCTTTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHTTT-------SCBCTTTCSBC
T ss_pred hcCcHhcCCcCccccccCCeECCCCCeEECHHHHHHHHHh-------CCCCCCCCCCC
Confidence 35577999999843 4566666666653 35899998864
No 138
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.62 E-value=0.38 Score=27.95 Aligned_cols=33 Identities=24% Similarity=0.258 Sum_probs=24.1
Q ss_pred cccCCCCCCC-CCHHHHHhhhhhhccCCCcceecCc
Q 030491 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPI 80 (176)
Q Consensus 46 ~F~CPFC~e~-fDv~~L~~H~~eeH~~e~k~vVCPI 80 (176)
.|.|++|++. -....|..|... |.. .+.-.|+|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2en9_A 12 LFKCNECKKTFTQSSSLTVHQRI-HTG-EKPSGPSS 45 (46)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHH-HTS-SCCCSCCC
T ss_pred CEECCccCcccCCHHHHHHHHHH-cCC-CCCCCCCC
Confidence 6999999994 456788899765 543 35677775
No 139
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=89.55 E-value=0.28 Score=28.59 Aligned_cols=33 Identities=21% Similarity=0.202 Sum_probs=24.2
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPI 80 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPI 80 (176)
.|.|++|++ --....|..|... |.. .++-.|+|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2emj_A 12 PFECAECGKSFSISSQLATHQRI-HTG-EKPSGPSS 45 (46)
T ss_dssp SEECSSSSCEESSHHHHHHHHHH-HTT-SCSSSSCC
T ss_pred CEECCCCCcccCCHHHHHHHHHH-hCC-CCCCCCCC
Confidence 599999999 5566788899765 543 35667775
No 140
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.52 E-value=0.34 Score=28.09 Aligned_cols=33 Identities=21% Similarity=0.316 Sum_probs=23.9
Q ss_pred cccCCCCCCCC-CHHHHHhhhhhhccCCCcceecCc
Q 030491 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPI 80 (176)
Q Consensus 46 ~F~CPFC~e~f-Dv~~L~~H~~eeH~~e~k~vVCPI 80 (176)
.|.|++|++.| ....|..|... |.. .++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2eq1_A 12 PYKCNECGKAFRAHSNLTTHQVI-HTG-EKPSGPSS 45 (46)
T ss_dssp CCCCTTTTCCCSSHHHHHHHHTT-TCC-SCCSSCCC
T ss_pred CeECCcCChhhCCHHHHHHHHHH-hCC-CCCCCCCC
Confidence 59999999954 56788899764 543 35567764
No 141
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.50 E-value=0.3 Score=28.45 Aligned_cols=33 Identities=21% Similarity=0.253 Sum_probs=24.0
Q ss_pred cccCCCCCCC-CCHHHHHhhhhhhccCCCcceecCc
Q 030491 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPI 80 (176)
Q Consensus 46 ~F~CPFC~e~-fDv~~L~~H~~eeH~~e~k~vVCPI 80 (176)
.|.|++|++. -....|..|... |.. .+.-.||+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2em4_A 12 PYECIECGKAFKTKSSLICHRRS-HTG-EKPSGPSS 45 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HSS-SSCCCCCC
T ss_pred CcCCCCCCCccCCHHHHHHHHHh-cCC-CCCCCCCC
Confidence 5999999994 456788899765 543 45677775
No 142
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.32 E-value=0.29 Score=28.32 Aligned_cols=33 Identities=21% Similarity=0.262 Sum_probs=24.1
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPI 80 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPI 80 (176)
.|.|++|++ --....|..|... |.. .++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2ytf_A 12 PFECSECQKAFNTKSNLIVHQRT-HTG-EKPSGPSS 45 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHT-SCS-SSSSCCCC
T ss_pred CcCCCCCCcccCCHHHHHHHHHH-hCC-CCCCCCCC
Confidence 599999999 5567788899764 543 35567765
No 143
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.31 E-value=0.39 Score=27.67 Aligned_cols=33 Identities=24% Similarity=0.176 Sum_probs=24.0
Q ss_pred cccCCCCCCC-CCHHHHHhhhhhhccCCCcceecCc
Q 030491 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPI 80 (176)
Q Consensus 46 ~F~CPFC~e~-fDv~~L~~H~~eeH~~e~k~vVCPI 80 (176)
.|.|+.|++. .....|..|... |.. .+...|+|
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 43 (43)
T 2yrm_A 10 AFFCNECDCRFSEEASLKRHTLQ-THS-DKSGPSSG 43 (43)
T ss_dssp CBCCSSSCCCBSSHHHHHHHHHH-HTC-TTCSSSCC
T ss_pred CEECCCCCCeeCChHHHHHHHHh-hCC-CCCccCCC
Confidence 5999999994 466788899765 443 35667775
No 144
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.30 E-value=0.17 Score=31.46 Aligned_cols=40 Identities=18% Similarity=0.509 Sum_probs=22.4
Q ss_pred CCCCcccCCCCCCCCCHHH-------HHhhhhhhccCC-CcceecCcc
Q 030491 42 DVRPDFPCPYCYEDFDIAS-------LCSHLEDEHSCE-SKVTVCPIC 81 (176)
Q Consensus 42 d~r~~F~CPFC~e~fDv~~-------L~~H~~eeH~~e-~k~vVCPIC 81 (176)
+....+.||.|.+.+.... .+..|....... .....||+|
T Consensus 11 ~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 11 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp CSCCCCBCSSSCCBCSSCCCCSSCCCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred ccccCCCCccCCcccCccEeCCCCCccCHHHHHHHHHhcCCCCCCCCC
Confidence 4556889999988554321 122344443221 245678887
No 145
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.09 E-value=0.3 Score=28.42 Aligned_cols=33 Identities=18% Similarity=0.200 Sum_probs=24.4
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPI 80 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPI 80 (176)
.|.|++|++ --....|..|... |.. .+.-.||+
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2ytp_A 12 HYECSECGKAFARKSTLIMHQRI-HTG-EKPSGPSS 45 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHTT-TSC-CCCCSSCC
T ss_pred CeECCcCCcccCCHHHHHHHHHH-hCC-CCCCCCCC
Confidence 599999999 5567888999764 543 35677775
No 146
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=88.96 E-value=0.12 Score=34.33 Aligned_cols=45 Identities=13% Similarity=0.234 Sum_probs=26.3
Q ss_pred CCCCCCcccCCCCCCCCCHHH--HHhh-----hhhhccCCCcceecCcccccc
Q 030491 40 EDDVRPDFPCPYCYEDFDIAS--LCSH-----LEDEHSCESKVTVCPICSVKV 85 (176)
Q Consensus 40 ddd~r~~F~CPFC~e~fDv~~--L~~H-----~~eeH~~e~k~vVCPICaa~~ 85 (176)
+++....|.||.|.+-|.... -|.| |...+- ......||+|...+
T Consensus 2 ~~~~~~~~~C~IC~~~~~~Pv~~~CgH~fc~~Ci~~~~-~~~~~~CP~C~~~~ 53 (78)
T 1t1h_A 2 SPEFPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWL-DAGHKTCPKSQETL 53 (78)
T ss_dssp CCCCSSSSSCTTTSCCCSSEEEETTTEEEEHHHHHHHH-TTTCCBCTTTCCBC
T ss_pred CcCCcccCCCCCccccccCCEEcCCCCeecHHHHHHHH-HHCcCCCCCCcCCC
Confidence 345667899999988544321 1222 333322 22367899998875
No 147
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=88.90 E-value=0.37 Score=27.28 Aligned_cols=32 Identities=22% Similarity=0.303 Sum_probs=21.8
Q ss_pred cccCCCCCCC-CCHHHHHhhhhhhccCCCcceecC
Q 030491 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCP 79 (176)
Q Consensus 46 ~F~CPFC~e~-fDv~~L~~H~~eeH~~e~k~vVCP 79 (176)
.|.|++|++. -....|..|... |..+ +.-.||
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~ 42 (42)
T 2el5_A 10 PYECSECGKAFNRKDQLISHQRT-HAGE-SGPSSG 42 (42)
T ss_dssp SEECSSSCCEESSHHHHHHHHGG-GCCC-CSCCCC
T ss_pred CccCCCcChhhCCHHHHHHHHHh-cCCC-CCCCCC
Confidence 5999999994 456778888764 5433 455564
No 148
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.73 E-value=0.32 Score=28.10 Aligned_cols=33 Identities=21% Similarity=0.206 Sum_probs=23.7
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPI 80 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPI 80 (176)
.|.|++|++ --....|..|... |.. .++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2yrj_A 12 PYRCGECGKAFAQKANLTQHQRI-HTG-EKPSGPSS 45 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHTT-TSS-CCSSCSCC
T ss_pred CeECCCCCCccCCHHHHHHHHHH-cCC-CCCCCCCC
Confidence 599999999 4566788889764 543 35667765
No 149
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.69 E-value=0.33 Score=28.03 Aligned_cols=33 Identities=18% Similarity=0.189 Sum_probs=24.0
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPI 80 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPI 80 (176)
.|.|++|++ --....|..|... |.. .++-.|||
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~kp~~C~~ 45 (46)
T 2eor_A 12 PYNCEECGKAFIHDSQLQEHQRI-HTG-EKPSGPSS 45 (46)
T ss_dssp SEECTTTCCEESSHHHHHHHHHH-HHS-CCCSSSTT
T ss_pred CccCCCCCCCcCCHHHHHHHHHh-cCC-CCCCCCCC
Confidence 599999999 4466788899765 543 35567875
No 150
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=88.58 E-value=0.1 Score=33.42 Aligned_cols=18 Identities=17% Similarity=0.658 Sum_probs=13.3
Q ss_pred CCCCCCcccCCCCCCCCC
Q 030491 40 EDDVRPDFPCPYCYEDFD 57 (176)
Q Consensus 40 ddd~r~~F~CPFC~e~fD 57 (176)
.++....+.||.|.+.+.
T Consensus 14 ~~~~~~~~~C~IC~~~~~ 31 (63)
T 2ysj_A 14 VNKLQEEVICPICLDILQ 31 (63)
T ss_dssp CCCCCCCCBCTTTCSBCS
T ss_pred HHhCccCCCCCcCCchhC
Confidence 345667899999988554
No 151
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.32 E-value=0.48 Score=27.52 Aligned_cols=33 Identities=21% Similarity=0.367 Sum_probs=23.9
Q ss_pred cccCCCCCCCC-CHHHHHhhhhhhccCCCcceecCc
Q 030491 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPI 80 (176)
Q Consensus 46 ~F~CPFC~e~f-Dv~~L~~H~~eeH~~e~k~vVCPI 80 (176)
.|.|+.|++.| ....|..|.. .|.. .++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~ 45 (46)
T 2em6_A 12 CYKCDVCGKEFSQSSHLQTHQR-VHTG-EKPSGPSS 45 (46)
T ss_dssp CCBCSSSCCBCSSHHHHHHHHT-TTSS-SCCCCTTC
T ss_pred CeECCCCCcccCCHHHHHHHHH-HcCC-CCCCCCCC
Confidence 59999999955 5678889965 4543 35667764
No 152
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=88.22 E-value=0.37 Score=24.57 Aligned_cols=24 Identities=29% Similarity=0.703 Sum_probs=17.7
Q ss_pred cccCCCCCCCC-CHHHHHhhhhhhc
Q 030491 46 DFPCPYCYEDF-DIASLCSHLEDEH 69 (176)
Q Consensus 46 ~F~CPFC~e~f-Dv~~L~~H~~eeH 69 (176)
.|.|+.|+..| ....|..|....|
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~~h~ 26 (30)
T 1klr_A 2 TYQCQYCEFRSADSSNLKTHIKTKH 26 (30)
T ss_dssp CCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred CccCCCCCCccCCHHHHHHHHHHHc
Confidence 37899999955 5577888877544
No 153
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=88.15 E-value=0.07 Score=36.00 Aligned_cols=46 Identities=24% Similarity=0.485 Sum_probs=26.7
Q ss_pred CCCCCCCcccCCCCCCCCCHHHH--Hhh-----hhhhccCCCcceecCcccccch
Q 030491 39 VEDDVRPDFPCPYCYEDFDIASL--CSH-----LEDEHSCESKVTVCPICSVKVA 86 (176)
Q Consensus 39 ~ddd~r~~F~CPFC~e~fDv~~L--~~H-----~~eeH~~e~k~vVCPICaa~~s 86 (176)
.+++....+.||.|.+.+....+ |.| |..... .....||+|...+.
T Consensus 8 ~~~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~--~~~~~CP~Cr~~~~ 60 (81)
T 2csy_A 8 GSEEEEIPFRCFICRQAFQNPVVTKCRHYFCESCALEHF--RATPRCYICDQPTG 60 (81)
T ss_dssp CSSCCCCCSBCSSSCSBCCSEEECTTSCEEEHHHHHHHH--HHCSBCSSSCCBCC
T ss_pred CcccCCCCCCCcCCCchhcCeeEccCCCHhHHHHHHHHH--HCCCcCCCcCcccc
Confidence 34455678999999885543211 222 332222 12457999988764
No 154
>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5
Probab=87.93 E-value=0.5 Score=36.17 Aligned_cols=32 Identities=25% Similarity=0.378 Sum_probs=27.4
Q ss_pred CCcccCCCCCC-CCCHHHHHhhhhhhccCCCcc
Q 030491 44 RPDFPCPYCYE-DFDIASLCSHLEDEHSCESKV 75 (176)
Q Consensus 44 r~~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~ 75 (176)
...+.|=||.+ --+...+..||.+.|.++-..
T Consensus 13 ~~~~~CLFCd~~~~s~~~~l~H~k~~H~FD~~~ 45 (121)
T 1wir_A 13 RQHTPCLFCDRLFASAEETFSHCKLEHQFNIDS 45 (121)
T ss_dssp CCCEECSSSCCEESSHHHHHHHHHHSSCCCHHH
T ss_pred CCceeEecCCCcccCHHHHHHHHHHhcCCCHHH
Confidence 35699999999 679999999999999997554
No 155
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=87.79 E-value=0.051 Score=37.34 Aligned_cols=46 Identities=20% Similarity=0.447 Sum_probs=28.0
Q ss_pred CCCCCCcccCCCCCCCCCH-HHH--Hhh-----hhhhccCCCcceecCcccccc
Q 030491 40 EDDVRPDFPCPYCYEDFDI-ASL--CSH-----LEDEHSCESKVTVCPICSVKV 85 (176)
Q Consensus 40 ddd~r~~F~CPFC~e~fDv-~~L--~~H-----~~eeH~~e~k~vVCPICaa~~ 85 (176)
++++...|.||.|.+.|.. ..| |.| |...+-.......||+|....
T Consensus 7 ~~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~ 60 (92)
T 3ztg_A 7 DDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQND 60 (92)
T ss_dssp CCCCCTTTEETTTTEECSSCEECTTTCCEECHHHHHHHHHHCTTCCCTTTCCSS
T ss_pred cccCCcCCCCCCCChhhcCceECCCCCCHHHHHHHHHHHHhcCCCcCcCCCCcC
Confidence 3456678999999874432 222 334 444443334457999998763
No 156
>1wii_A Hypothetical UPF0222 protein MGC4549; domain of unknown function, zinc finger, metal-binding protein, structural genomics; NMR {Mus musculus} SCOP: g.41.3.4
Probab=87.75 E-value=0.11 Score=37.79 Aligned_cols=37 Identities=19% Similarity=0.668 Sum_probs=23.7
Q ss_pred CCCcccCCCCCCCCCHHHHHhhhhhhccCCCcceecCccccc
Q 030491 43 VRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVK 84 (176)
Q Consensus 43 ~r~~F~CPFC~e~fDv~~L~~H~~eeH~~e~k~vVCPICaa~ 84 (176)
+...|.||||+-+=. ..|.-......-.+.|-||-..
T Consensus 20 L~t~F~CPfCnh~~s-----V~vkidk~~~~g~l~C~~Cg~~ 56 (85)
T 1wii_A 20 LETQFTCPFCNHEKS-----CDVKMDRARNTGVISCTVCLEE 56 (85)
T ss_dssp CSSCCCCTTTCCSSC-----EEEEEETTTTEEEEEESSSCCE
T ss_pred CCCeEcCCCCCCCCe-----EEEEEEccCCEEEEEcccCCCe
Confidence 456899999987321 1233333344556889999875
No 157
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=87.63 E-value=0.47 Score=26.98 Aligned_cols=32 Identities=19% Similarity=0.267 Sum_probs=22.2
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecC
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCP 79 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCP 79 (176)
.|.|++|++ --....|..|... |..+ +.-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~ 44 (44)
T 2eof_A 12 PYECNECQKAFNTKSNLMVHQRT-HTGE-SGPSSG 44 (44)
T ss_dssp SEECTTTCCEESCHHHHHHHHHH-TTTS-SCSCCC
T ss_pred CeECCCCCcccCCHhHHHHHHHH-hCCC-CCCCCC
Confidence 599999999 5567788889765 5433 445554
No 158
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.61 E-value=0.32 Score=28.29 Aligned_cols=34 Identities=24% Similarity=0.245 Sum_probs=23.8
Q ss_pred cccCCCCCCCC-CHHHHHhhhhhhccCCCcceecCc
Q 030491 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPI 80 (176)
Q Consensus 46 ~F~CPFC~e~f-Dv~~L~~H~~eeH~~e~k~vVCPI 80 (176)
.|.|+.|++.| ....|..|.. .|....+.-.|+|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~~C~~ 46 (46)
T 2eoy_A 12 CFKCNKCEKTFSCSKYLTQHER-IHTRGVKSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESSSHHHHHHHT-TCCSCCTTSSSCC
T ss_pred CEECcCCCCcCCCHHHHHHHHH-HcCCCCCCCCCCC
Confidence 59999999944 5678888975 4554245667765
No 159
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=87.51 E-value=0.41 Score=30.56 Aligned_cols=36 Identities=25% Similarity=0.407 Sum_probs=28.5
Q ss_pred cccCCC--CCC-CCCHHHHHhhhhhhccCCCcceecCcccc
Q 030491 46 DFPCPY--CYE-DFDIASLCSHLEDEHSCESKVTVCPICSV 83 (176)
Q Consensus 46 ~F~CPF--C~e-~fDv~~L~~H~~eeH~~e~k~vVCPICaa 83 (176)
.|.|++ |++ =-....|..|+.. |.. .+.-.|++|..
T Consensus 38 ~~~C~~~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C~k 76 (79)
T 2dlk_A 38 SFSCPEPACGKSFNFKKHLKEHMKL-HSD-TRDYICEFSGP 76 (79)
T ss_dssp CEECSCTTTCCEESSHHHHHHHHHH-HHT-SCCCSCCSSSC
T ss_pred CeECCCCCCcCccCCHHHHHHHHHH-hCC-CCCeeCCCCCC
Confidence 699999 999 5567889999985 443 36689999965
No 160
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=87.48 E-value=0.59 Score=23.73 Aligned_cols=22 Identities=27% Similarity=0.573 Sum_probs=16.8
Q ss_pred cccCCCCCCCC-CHHHHHhhhhh
Q 030491 46 DFPCPYCYEDF-DIASLCSHLED 67 (176)
Q Consensus 46 ~F~CPFC~e~f-Dv~~L~~H~~e 67 (176)
.|.|+.|++.| ....|..|...
T Consensus 2 ~~~C~~C~~~f~~~~~l~~H~~~ 24 (29)
T 1ard_A 2 SFVCEVCTRAFARQEHLKRHYRS 24 (29)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHH
T ss_pred CeECCCCCcccCCHHHHHHHHHH
Confidence 48899999954 56778888765
No 161
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=87.40 E-value=1.4 Score=29.16 Aligned_cols=51 Identities=25% Similarity=0.540 Sum_probs=37.1
Q ss_pred ccCCC--CCCC-CCHHHHHhhhhhhccCCC-----cceecC--ccccc--chhhHHHHhhhhc
Q 030491 47 FPCPY--CYED-FDIASLCSHLEDEHSCES-----KVTVCP--ICSVK--VARDMLSHITLQH 97 (176)
Q Consensus 47 F~CPF--C~e~-fDv~~L~~H~~eeH~~e~-----k~vVCP--ICaa~--~s~d~l~HL~~rH 97 (176)
|.|-. |++. -+..+|+.|+..+|-... .+.+|. -|... ....|+.||...|
T Consensus 2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H 64 (64)
T 1zw8_A 2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH 64 (64)
T ss_dssp CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence 34444 8884 456779999999998654 367887 78765 3568999998776
No 162
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=87.18 E-value=0.33 Score=28.26 Aligned_cols=33 Identities=21% Similarity=0.262 Sum_probs=23.6
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPI 80 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPI 80 (176)
.|.|++|++ --....|..|... |.. .+.-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~ 45 (46)
T 2eoz_A 12 PYSCNVCGKAFVLSAHLNQHLRV-HTQ-ETLSGPSS 45 (46)
T ss_dssp SEEETTTTEEESSHHHHHHHHHH-HSS-CCSSSCCC
T ss_pred CeECcccChhhCCHHHHHHHHHH-hCC-CCCCCCCC
Confidence 599999999 5566788899765 543 34566764
No 163
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=87.15 E-value=0.42 Score=29.04 Aligned_cols=28 Identities=25% Similarity=0.389 Sum_probs=23.4
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCC
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCES 73 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~ 73 (176)
.|.||+|++ --....|..|+...|..+.
T Consensus 30 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~ 58 (60)
T 2adr_A 30 PYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58 (60)
T ss_dssp SEECTTTCCEESSHHHHHHHHTTTSCCSS
T ss_pred CccCCCCCCccCCHHHHHHHHHHHcCCcC
Confidence 699999999 4577899999988887653
No 164
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=87.13 E-value=0.41 Score=30.81 Aligned_cols=29 Identities=31% Similarity=0.543 Sum_probs=24.5
Q ss_pred CcccCCCCCC-CCCHHHHHhhhhhhccCCC
Q 030491 45 PDFPCPYCYE-DFDIASLCSHLEDEHSCES 73 (176)
Q Consensus 45 ~~F~CPFC~e-~fDv~~L~~H~~eeH~~e~ 73 (176)
..|.|++|++ --....|..|+...|..+.
T Consensus 44 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~ 73 (77)
T 2ct1_A 44 AKFHCPHCDTVIARKSDLGVHLRKQHSYSG 73 (77)
T ss_dssp SSEECSSSSCEESSHHHHHHHHHHTSCCSC
T ss_pred CccCCCCCCCccCCHHHHHHHHHHhCCCCC
Confidence 3699999999 4578899999999998754
No 165
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=87.13 E-value=0.37 Score=36.70 Aligned_cols=40 Identities=25% Similarity=0.541 Sum_probs=17.9
Q ss_pred CCCCCCHHHHHhhhhhhccCCCcceecCcccccc-hhhHHHHhh
Q 030491 52 CYEDFDIASLCSHLEDEHSCESKVTVCPICSVKV-ARDMLSHIT 94 (176)
Q Consensus 52 C~e~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~-s~d~l~HL~ 94 (176)
|.+.+....|..|.. + =+-+.+.||-|...+ ..++..|+.
T Consensus 90 C~~~~~~~~l~~H~~-~--C~~~~v~C~~C~~~~~r~~l~~H~~ 130 (170)
T 3hcs_A 90 CLHKMELRHLEDHQA-H--CEFALMDCPQCQRPFQKFHINIHIL 130 (170)
T ss_dssp CCCEEEGGGHHHHHT-T--CTTSEEECTTTCCEEEGGGHHHHHH
T ss_pred CCceecHhHHHHHHh-c--CCceeeECCCCChHHHHHHHHHHhh
Confidence 555445555555531 1 122345555555432 344555553
No 166
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.05 E-value=0.64 Score=27.02 Aligned_cols=33 Identities=18% Similarity=0.242 Sum_probs=23.6
Q ss_pred cccCCCCCCCC-CHHHHHhhhhhhccCCCcceecCc
Q 030491 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPI 80 (176)
Q Consensus 46 ~F~CPFC~e~f-Dv~~L~~H~~eeH~~e~k~vVCPI 80 (176)
.|.|++|++.| ....|..|... |.. .++-.|.|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2eom_A 12 GHRCSDCGKFFLQASNFIQHRRI-HTG-EKPSGPSS 45 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHHH-HSS-CCCSSCCC
T ss_pred CcCCCCCCCeeCChHHHHHHHHH-hCC-CCCCCCCC
Confidence 59999999955 56788899765 543 35566654
No 167
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=86.90 E-value=0.64 Score=33.41 Aligned_cols=37 Identities=19% Similarity=0.231 Sum_probs=25.9
Q ss_pred CCCCcccCCCCCC------------CCCHHHHHhhhhhhccCCCcceecCcccccc
Q 030491 42 DVRPDFPCPYCYE------------DFDIASLCSHLEDEHSCESKVTVCPICSVKV 85 (176)
Q Consensus 42 d~r~~F~CPFC~e------------~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~ 85 (176)
+.+..|.||.|.+ .|+...+..++.. ...||+|....
T Consensus 25 ~~p~~~~CpI~~~~m~dPV~~~cGhtf~r~~I~~~l~~-------~~~cP~~~~~l 73 (100)
T 2kre_A 25 DAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLN-------SPTDPFNRQTL 73 (100)
T ss_dssp SCSTTTBCTTTCSBCSSEEEETTTEEEEHHHHHHHTTS-------CSBCSSSCCBC
T ss_pred cCcHhhCCcCccCcccCCeECCCCCEEchHHHHHHHHc-------CCCCCCCCCCC
Confidence 4577999999854 4555666666542 36899998864
No 168
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=86.40 E-value=0.36 Score=27.94 Aligned_cols=33 Identities=21% Similarity=0.281 Sum_probs=23.4
Q ss_pred cccCCCCCCC-CCHHHHHhhhhhhccCCCcceecCc
Q 030491 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPI 80 (176)
Q Consensus 46 ~F~CPFC~e~-fDv~~L~~H~~eeH~~e~k~vVCPI 80 (176)
.|.|++|++. -....|..|... |.. .+.-.||+
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (45)
T 2epu_A 12 PFECTHCGKSFRAKGNLVTHQRI-HTG-EKSGPSSG 45 (45)
T ss_dssp SEEETTTTEEESSHHHHHHHHTT-TSS-CCCCCSCC
T ss_pred CccCCCCCCccCChHHHHHHHHH-hCC-CCCCCCCC
Confidence 5999999994 456778889754 543 35667775
No 169
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=86.31 E-value=0.49 Score=27.46 Aligned_cols=33 Identities=27% Similarity=0.292 Sum_probs=23.0
Q ss_pred cccCCCCCCC-CCHHHHHhhhhhhccCCCcceecCc
Q 030491 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPI 80 (176)
Q Consensus 46 ~F~CPFC~e~-fDv~~L~~H~~eeH~~e~k~vVCPI 80 (176)
.|.|++|++. -....|..|... |.. .+.-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2emz_A 12 PFKCNECGKGFGRRSHLAGHLRL-HSR-EKSSGPSS 45 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHHH-HHH-TTCCCSCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-hCC-CCCCCCCC
Confidence 5999999994 456778889765 433 34566764
No 170
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=86.27 E-value=1.3 Score=29.13 Aligned_cols=45 Identities=22% Similarity=0.499 Sum_probs=26.6
Q ss_pred CCCCcccCCCCCCCCCHHH--HHhh-----hhhhccC----CCcceecCcccccch
Q 030491 42 DVRPDFPCPYCYEDFDIAS--LCSH-----LEDEHSC----ESKVTVCPICSVKVA 86 (176)
Q Consensus 42 d~r~~F~CPFC~e~fDv~~--L~~H-----~~eeH~~----e~k~vVCPICaa~~s 86 (176)
+....|.||.|.+.+.... -|.| |...+.. +.....||+|...+.
T Consensus 15 ~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~ 70 (85)
T 2ecw_A 15 MIKEEVTCPICLELLKEPVSADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYP 70 (85)
T ss_dssp CCCTTTSCTTTCSCCSSCEECTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCC
T ss_pred hCccCCCCcCCChhhCcceeCCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCC
Confidence 4566899999988554321 1323 3333222 234788999988764
No 171
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=85.95 E-value=0.64 Score=26.90 Aligned_cols=34 Identities=24% Similarity=0.147 Sum_probs=26.2
Q ss_pred cccCC--CCCC-CCCHHHHHhhhhhhccCCCcceecCcc
Q 030491 46 DFPCP--YCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (176)
Q Consensus 46 ~F~CP--FC~e-~fDv~~L~~H~~eeH~~e~k~vVCPIC 81 (176)
.|.|+ .|++ -.....|..|... |.. .+.-.|++|
T Consensus 12 ~~~C~~~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 48 (48)
T 2ent_A 12 PFACTWPGCGWRFSRSDELSRHRRS-HSG-VKPSGPSSG 48 (48)
T ss_dssp CEECCSSSCCCEESSHHHHHHHHTT-SCC-CCSCSSCCC
T ss_pred CeECCCCCCCCccCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 69997 8999 5567889999765 543 467889988
No 172
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=85.94 E-value=0.92 Score=25.44 Aligned_cols=31 Identities=23% Similarity=0.399 Sum_probs=21.3
Q ss_pred cccCCCCCCC-CCHHHHHhhhhhhccCCCcceec
Q 030491 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVC 78 (176)
Q Consensus 46 ~F~CPFC~e~-fDv~~L~~H~~eeH~~e~k~vVC 78 (176)
.|.|+.|++. -....|..|... |..+ ++-.|
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C 41 (42)
T 2yte_A 10 PYSCAECKETFSDNNRLVQHQKM-HTVK-SGPSS 41 (42)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHHH-TSCC-SSCCC
T ss_pred CeECCCCCCccCCHHHHHHHHHH-hCCC-CCCCC
Confidence 5999999994 456778888765 5443 34444
No 173
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=85.71 E-value=0.65 Score=29.85 Aligned_cols=37 Identities=11% Similarity=0.128 Sum_probs=29.0
Q ss_pred CcccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcccc
Q 030491 45 PDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSV 83 (176)
Q Consensus 45 ~~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPICaa 83 (176)
..|.|+.|++ --....|..|....|. .+...|++|..
T Consensus 46 ~~~~C~~C~~~f~~~~~L~~H~~~h~~--~~~~~~~~~~~ 83 (86)
T 1x6h_A 46 AAFVCSKCGKTFTRRNTMARHADNCAG--PDGVEGENSGP 83 (86)
T ss_dssp CCEECSSSCCEESCHHHHHHHHHHCCC--CCSCCCCCCCC
T ss_pred cceECCCCCChhCCHHHHHHHHHHccC--CCCcccCCCCC
Confidence 4799999999 5578899999987755 34567888864
No 174
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=85.63 E-value=0.3 Score=33.80 Aligned_cols=42 Identities=21% Similarity=0.576 Sum_probs=26.4
Q ss_pred CCcccCCCCCCCCCHHHH------Hhh-----hhhhccCCCcceecCcccccch
Q 030491 44 RPDFPCPYCYEDFDIASL------CSH-----LEDEHSCESKVTVCPICSVKVA 86 (176)
Q Consensus 44 r~~F~CPFC~e~fDv~~L------~~H-----~~eeH~~e~k~vVCPICaa~~s 86 (176)
...+.||.|-+.++.... |-| |-.... +..+..||+|...+.
T Consensus 9 ~~~~~CpICle~~~~~d~~~~p~~CGH~fC~~Cl~~~~-~~~~~~CP~CR~~~~ 61 (78)
T 1e4u_A 9 EDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIR-TDENGLCPACRKPYP 61 (78)
T ss_dssp CCCCBCTTTCCBCCTTTTTCCSSTTSCCCCHHHHHHHT-TSSCSBCTTTCCBCS
T ss_pred ccCCcCCccCccCccccccccccCCCCCcCHHHHHHHH-hcCCCCCCCCCCccC
Confidence 347899999997754311 333 333332 224678999998764
No 175
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=85.63 E-value=0.19 Score=33.21 Aligned_cols=45 Identities=27% Similarity=0.638 Sum_probs=27.4
Q ss_pred CCCCcccCCCCCCCCCHH-------HHHhhhhhhccCC-----CcceecCcccccch
Q 030491 42 DVRPDFPCPYCYEDFDIA-------SLCSHLEDEHSCE-----SKVTVCPICSVKVA 86 (176)
Q Consensus 42 d~r~~F~CPFC~e~fDv~-------~L~~H~~eeH~~e-----~k~vVCPICaa~~s 86 (176)
++...+.||.|.+.|... .+|..|...+-.. .....||+|...+.
T Consensus 8 ~~~~~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~ 64 (79)
T 2egp_A 8 NVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYS 64 (79)
T ss_dssp CCCCCCEETTTTEECSSCCCCSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCC
T ss_pred hcccCCCCcCCCcccCCeeECCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCC
Confidence 455689999998744432 1233344444333 23678999988764
No 176
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=85.61 E-value=0.77 Score=26.57 Aligned_cols=32 Identities=22% Similarity=0.437 Sum_probs=22.9
Q ss_pred cccCCCCCCCC-CHHHHHhhhhhhccCCCcceecC
Q 030491 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCP 79 (176)
Q Consensus 46 ~F~CPFC~e~f-Dv~~L~~H~~eeH~~e~k~vVCP 79 (176)
.|.|++|++.| ....|..|... |.. .+.-.||
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~ 44 (46)
T 2eoh_A 12 PYECKECRKTFIQIGHLNQHKRV-HTG-ERSSGPS 44 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHHH-CSS-CCSCSTT
T ss_pred CcCCCCcCchhCCHHHHHHHHHH-hCC-CCCCCCC
Confidence 59999999954 56788889764 543 3456665
No 177
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=85.24 E-value=0.85 Score=25.83 Aligned_cols=32 Identities=19% Similarity=0.241 Sum_probs=21.9
Q ss_pred cccCCCCCCC-CCHHHHHhhhhhhccCCCcceecC
Q 030491 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCP 79 (176)
Q Consensus 46 ~F~CPFC~e~-fDv~~L~~H~~eeH~~e~k~vVCP 79 (176)
.|.|++|++. -....|..|... |..+ +.-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~ 44 (44)
T 2en7_A 12 PYVCNECGKAFRSKSYLIIHTRT-HTGE-SGPSSG 44 (44)
T ss_dssp SSCCTTTCCCCSSHHHHHHHHTT-TCCS-SSSCCC
T ss_pred CeECCCCCCccCCHHHHHHHhhh-cCCC-CCCCCC
Confidence 5999999994 456778888754 5433 445554
No 178
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=84.68 E-value=0.62 Score=27.86 Aligned_cols=30 Identities=20% Similarity=0.366 Sum_probs=18.3
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKV 75 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~ 75 (176)
-|.|++|++ -.....|..|+...|..+...
T Consensus 7 p~~C~~C~k~F~~~~~L~~H~~~~H~~e~~~ 37 (48)
T 3iuf_A 7 PYACDICGKRYKNRPGLSYHYAHSHLAEEEG 37 (48)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHSSCC----
T ss_pred CEECCCcCcccCCHHHHHHHhhhhcCCCCCC
Confidence 478888888 445667778877566655443
No 179
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=84.41 E-value=0.013 Score=36.97 Aligned_cols=43 Identities=16% Similarity=0.238 Sum_probs=28.4
Q ss_pred cccCCCCCCCCCHH-HHHhhhhhhccCCCcceecCcccccc--hhhHHHHhhhhc
Q 030491 46 DFPCPYCYEDFDIA-SLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQH 97 (176)
Q Consensus 46 ~F~CPFC~e~fDv~-~L~~H~~eeH~~e~k~vVCPICaa~~--s~d~l~HL~~rH 97 (176)
.|.|+.|++.|... .|.. .+...|++|.... ..+|..|+...+
T Consensus 18 ~~~C~~C~k~f~~~~~l~~---------~~~~~C~~C~~~f~~~~~l~~H~~~H~ 63 (73)
T 2ctu_A 18 SQKCSKCGIIFIRRSTLSR---------RKTPMCEKCRKDSCQEAALNKDEGNES 63 (73)
T ss_dssp EEECSSSCCEEECCCCCCC---------SSSCCCHHHHHTCSCCCSSCCCSSCCC
T ss_pred CeeCCcccchhCCHHHhCc---------CCCCCCCCCChhhcCHHHHHHHHHhhc
Confidence 69999999855322 2222 4678899997654 457777776544
No 180
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=84.28 E-value=0.64 Score=26.74 Aligned_cols=33 Identities=21% Similarity=0.189 Sum_probs=22.8
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPI 80 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPI 80 (176)
.|.|++|++ --....|..|... |.. .+.-.|+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2eq3_A 12 PYECNQCGKAFSVRSSLTTHQAI-HTG-KKPSGPSS 45 (46)
T ss_dssp SSEETTTTEECSSHHHHHHHHTT-SCC-CCCCCSCC
T ss_pred CeECCCCChhhCCHHHHHHHHHH-hCC-CCCCCCCC
Confidence 599999999 4556778888764 543 34566653
No 181
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=84.26 E-value=0.99 Score=36.28 Aligned_cols=40 Identities=10% Similarity=0.178 Sum_probs=29.4
Q ss_pred CCCCCCcccCCCCC------------CCCCHHHHHhhhhhhccCCCcceecCcccccc
Q 030491 40 EDDVRPDFPCPYCY------------EDFDIASLCSHLEDEHSCESKVTVCPICSVKV 85 (176)
Q Consensus 40 ddd~r~~F~CPFC~------------e~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~ 85 (176)
+.+.+..|.||.|. -.|+...+..|+...+ . .||+|....
T Consensus 100 ~~~ip~~f~CPI~~elm~DPV~~~~Ghtfer~~I~~~l~~~~-----~-tcP~t~~~l 151 (179)
T 2f42_A 100 KREIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVG-----H-FDPVTRSPL 151 (179)
T ss_dssp CCCCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHTC-----S-BCTTTCCBC
T ss_pred ccCCcHhhcccCccccCCCCeECCCCCEECHHHHHHHHHhCC-----C-CCCCCcCCC
Confidence 34567899999974 4577888888887631 1 699998764
No 182
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=84.18 E-value=0.58 Score=27.99 Aligned_cols=24 Identities=33% Similarity=0.620 Sum_probs=20.6
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEH 69 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH 69 (176)
.|.||+|+. --....|..|+...|
T Consensus 32 ~~~C~~C~~~f~~~~~l~~H~~~hh 56 (57)
T 3uk3_C 32 PYKCEFCEYAAAQKTSLRYHLERHH 56 (57)
T ss_dssp CEECSSSSCEESSHHHHHHHHHHHC
T ss_pred CcCCCCCcchhCCHHHHHHHHHHhc
Confidence 599999999 557888999998876
No 183
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=83.98 E-value=0.87 Score=26.34 Aligned_cols=33 Identities=30% Similarity=0.416 Sum_probs=22.8
Q ss_pred cccCCCCCCCC-CHHHHHhhhhhhccCCCcceecCc
Q 030491 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPI 80 (176)
Q Consensus 46 ~F~CPFC~e~f-Dv~~L~~H~~eeH~~e~k~vVCPI 80 (176)
.|.|++|++.| ....|..|... |.. .+.-.|+.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2enh_A 12 PYECDVCRKAFSHHASLTQHQRV-HSG-EKPSGPSS 45 (46)
T ss_dssp SCBCTTTCCBCSSSHHHHHHGGG-SCC-SCCCCCCC
T ss_pred CcCCCCcCchhCCHHHHHHHHHH-hCC-CCCCCCCC
Confidence 59999999955 45778888764 543 34566653
No 184
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=83.97 E-value=0.34 Score=26.67 Aligned_cols=22 Identities=32% Similarity=0.587 Sum_probs=17.8
Q ss_pred cccCCCCCCCCCH--HHHHhhhhh
Q 030491 46 DFPCPYCYEDFDI--ASLCSHLED 67 (176)
Q Consensus 46 ~F~CPFC~e~fDv--~~L~~H~~e 67 (176)
.|.|++|++.|.. ..|..|...
T Consensus 9 ~~~C~~C~k~f~~~~~~L~~H~~~ 32 (37)
T 2elp_A 9 AMKCPYCDFYFMKNGSDLQRHIWA 32 (37)
T ss_dssp CEECSSSSCEECSSCHHHHHHHHH
T ss_pred CeECCCCChhhccCHHHHHHHHHh
Confidence 5999999997665 588899764
No 185
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=83.94 E-value=0.68 Score=23.38 Aligned_cols=22 Identities=23% Similarity=0.353 Sum_probs=16.5
Q ss_pred cccCCCCCCC-CCHHHHHhhhhh
Q 030491 46 DFPCPYCYED-FDIASLCSHLED 67 (176)
Q Consensus 46 ~F~CPFC~e~-fDv~~L~~H~~e 67 (176)
.|.|+.|++. .....|..|...
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~~ 24 (29)
T 2m0f_A 2 PLKCRECGKQFTTSGNLKRHLRI 24 (29)
T ss_dssp CEECTTTSCEESCHHHHHHHHHH
T ss_pred CccCCCCCCccCChhHHHHHHHH
Confidence 4789999994 457788888754
No 186
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=83.22 E-value=1.3 Score=25.26 Aligned_cols=32 Identities=19% Similarity=0.189 Sum_probs=21.8
Q ss_pred cccCCCCCCCC-CHHHHHhhhhhhccCCCcceecC
Q 030491 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCP 79 (176)
Q Consensus 46 ~F~CPFC~e~f-Dv~~L~~H~~eeH~~e~k~vVCP 79 (176)
.|.|+.|++.| ....|..|... |.. .+.-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~ 44 (44)
T 2eou_A 12 TSECQECGKIFRHSSLLIEHQAL-HAG-ESGPSSG 44 (44)
T ss_dssp CCCCTTTCCCCSSHHHHHHHHHH-HTT-SCCCCCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-HCC-CCCCCCC
Confidence 69999999955 56778889765 543 3444553
No 187
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=83.04 E-value=1 Score=25.64 Aligned_cols=32 Identities=16% Similarity=0.223 Sum_probs=21.7
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecC
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCP 79 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCP 79 (176)
.|.|+.|++ --....|..|... |..+ +.-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~ 44 (44)
T 2emb_A 12 RYECSKCQATFNLRKHLIQHQKT-HAAK-SGPSSG 44 (44)
T ss_dssp SEECTTTCCEESCHHHHHHHGGG-GCCC-CCTTCC
T ss_pred CeECCCCCCccCCHHHHHHHHHH-cCCC-CCcCCC
Confidence 599999999 4566788888764 5433 344453
No 188
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=83.01 E-value=0.77 Score=28.35 Aligned_cols=25 Identities=24% Similarity=0.737 Sum_probs=21.3
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhcc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHS 70 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~ 70 (176)
.|.||+|++ --....|..|....|.
T Consensus 40 ~~~C~~C~k~f~~~~~L~~H~~~~H~ 65 (66)
T 2drp_A 40 VYPCPFCFKEFTRKDNMTAHVKIIHK 65 (66)
T ss_dssp CEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred CeECCCCCCccCCHHHHHHHHHHHcC
Confidence 699999999 4567889999988875
No 189
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=82.76 E-value=1.2 Score=22.32 Aligned_cols=21 Identities=24% Similarity=0.630 Sum_probs=15.4
Q ss_pred ccCCCCCCCC-CHHHHHhhhhh
Q 030491 47 FPCPYCYEDF-DIASLCSHLED 67 (176)
Q Consensus 47 F~CPFC~e~f-Dv~~L~~H~~e 67 (176)
|.|+.|++.| ....|..|...
T Consensus 2 ~~C~~C~k~f~~~~~l~~H~~~ 23 (27)
T 1znf_A 2 YKCGLCERSFVEKSALSRHQRV 23 (27)
T ss_dssp CBCSSSCCBCSSHHHHHHHGGG
T ss_pred ccCCCCCCcCCCHHHHHHHHHH
Confidence 7899999855 45777788754
No 190
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=82.70 E-value=1.2 Score=28.42 Aligned_cols=29 Identities=24% Similarity=0.443 Sum_probs=24.4
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESK 74 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k 74 (176)
.|.|++|++ --....|..|+...|..+..
T Consensus 38 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~ 67 (78)
T 2d9h_A 38 RFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67 (78)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHTSTTTSS
T ss_pred ccCCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence 699999999 55678999999999987543
No 191
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=82.58 E-value=0.86 Score=24.76 Aligned_cols=22 Identities=36% Similarity=0.451 Sum_probs=17.8
Q ss_pred cccCCCCCC-CCCHHHHHhhhhh
Q 030491 46 DFPCPYCYE-DFDIASLCSHLED 67 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~e 67 (176)
.|.|++|++ --....|..|...
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2els_A 9 IFTCEYCNKVFKFKHSLQAHLRI 31 (36)
T ss_dssp CEECTTTCCEESSHHHHHHHHHH
T ss_pred CEECCCCCceeCCHHHHHHHHHH
Confidence 699999999 4467788888764
No 192
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=82.57 E-value=0.23 Score=32.78 Aligned_cols=46 Identities=22% Similarity=0.574 Sum_probs=25.8
Q ss_pred CCCCCcccCCCCCCCCCHHH--HHhh-----hhhhccC----CCcceecCcccccch
Q 030491 41 DDVRPDFPCPYCYEDFDIAS--LCSH-----LEDEHSC----ESKVTVCPICSVKVA 86 (176)
Q Consensus 41 dd~r~~F~CPFC~e~fDv~~--L~~H-----~~eeH~~----e~k~vVCPICaa~~s 86 (176)
++....+.||.|.+.+.... -|.| |...+-. +.....||+|...+.
T Consensus 14 ~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~ 70 (85)
T 2ecv_A 14 VNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQ 70 (85)
T ss_dssp CCCCCCCCCTTTCSCCSSCBCCSSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSC
T ss_pred HHccCCCCCCCCCcccCCceeCCCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccC
Confidence 34566899999988554321 1222 2222211 123678999988764
No 193
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=82.52 E-value=0.72 Score=23.19 Aligned_cols=22 Identities=32% Similarity=0.779 Sum_probs=15.9
Q ss_pred cccCCCCCCCC-CHHHHHhhhhh
Q 030491 46 DFPCPYCYEDF-DIASLCSHLED 67 (176)
Q Consensus 46 ~F~CPFC~e~f-Dv~~L~~H~~e 67 (176)
.|.|+.|++.| ....|..|...
T Consensus 2 ~~~C~~C~~~f~~~~~l~~H~~~ 24 (29)
T 2m0e_A 2 EHKCPHCDKKFNQVGNLKAHLKI 24 (29)
T ss_dssp CCCCSSCCCCCCTTTHHHHHHHH
T ss_pred CCcCCCCCcccCCHHHHHHHHHH
Confidence 47899999955 45677788754
No 194
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=82.50 E-value=0.97 Score=26.11 Aligned_cols=32 Identities=19% Similarity=0.324 Sum_probs=21.9
Q ss_pred cccCCCCCCC-CCHHHHHhhhhhhccCCCcceecC
Q 030491 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCP 79 (176)
Q Consensus 46 ~F~CPFC~e~-fDv~~L~~H~~eeH~~e~k~vVCP 79 (176)
.|.|++|++. -....|..|... |..+ ++-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~ 44 (46)
T 2yto_A 12 PYKCSDCGKAFTRKSGLHIHQQS-HTGE-RHSGPS 44 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH-HTCC-CBTTTB
T ss_pred CEECcccCCccCCHhHHHHHHHH-cCCC-CCCCCC
Confidence 5999999994 456788888765 5433 445554
No 195
>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A
Probab=82.45 E-value=0.62 Score=29.00 Aligned_cols=25 Identities=28% Similarity=0.608 Sum_probs=22.2
Q ss_pred ccCCCCCC-CCCHHHHHhhhhhhccC
Q 030491 47 FPCPYCYE-DFDIASLCSHLEDEHSC 71 (176)
Q Consensus 47 F~CPFC~e-~fDv~~L~~H~~eeH~~ 71 (176)
--|-||-+ .-|+..|..|+.+.|-.
T Consensus 10 qhcrfckkkysdvknlikhire~hd~ 35 (37)
T 2elu_A 10 QHCRFCKKKYSDVKNLIKHIRDAHDP 35 (37)
T ss_dssp CEETTTTEECSSHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 36999998 99999999999999864
No 196
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=82.43 E-value=1.3 Score=35.18 Aligned_cols=38 Identities=16% Similarity=0.262 Sum_probs=24.6
Q ss_pred CCCCcccCCCCCC------------CCCHHHHHhhhhhhccCCCcceecCcccccc
Q 030491 42 DVRPDFPCPYCYE------------DFDIASLCSHLEDEHSCESKVTVCPICSVKV 85 (176)
Q Consensus 42 d~r~~F~CPFC~e------------~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~ 85 (176)
+....|.||.|.+ .|+..-+..++... ...||+|...+
T Consensus 204 ~~~~~~~c~i~~~~~~dPv~~~~gh~f~~~~i~~~~~~~------~~~cP~~~~~~ 253 (281)
T 2c2l_A 204 DIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRV------GHFNPVTRSPL 253 (281)
T ss_dssp CCCSTTBCTTTCSBCSSEEECSSCCEEETTHHHHHHHHT------CSSCTTTCCCC
T ss_pred CCCcccCCcCcCCHhcCCeECCCCCEECHHHHHHHHHHC------CCCCcCCCCCC
Confidence 4567899999865 34455555555432 12399998875
No 197
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=82.16 E-value=1.2 Score=24.17 Aligned_cols=22 Identities=32% Similarity=0.659 Sum_probs=17.2
Q ss_pred cccCCCCCCCC-CHHHHHhhhhh
Q 030491 46 DFPCPYCYEDF-DIASLCSHLED 67 (176)
Q Consensus 46 ~F~CPFC~e~f-Dv~~L~~H~~e 67 (176)
.|.|+.|++.| ....|..|...
T Consensus 11 ~~~C~~C~k~f~~~~~l~~H~~~ 33 (37)
T 1p7a_A 11 PFQCPDCDRSFSRSDHLALHRKR 33 (37)
T ss_dssp SBCCTTTCCCBSSHHHHHHHHGG
T ss_pred CccCCCCCcccCcHHHHHHHHHH
Confidence 59999999954 56788888654
No 198
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=81.99 E-value=0.99 Score=22.82 Aligned_cols=22 Identities=41% Similarity=0.810 Sum_probs=17.2
Q ss_pred cccCCCCCCCC-CHHHHHhhhhh
Q 030491 46 DFPCPYCYEDF-DIASLCSHLED 67 (176)
Q Consensus 46 ~F~CPFC~e~f-Dv~~L~~H~~e 67 (176)
.|.|+.|++.| ....|..|...
T Consensus 3 ~~~C~~C~~~f~~~~~l~~H~~~ 25 (30)
T 2m0d_A 3 PYQCDYCGRSFSDPTSKMRHLET 25 (30)
T ss_dssp CEECTTTCCEESCHHHHHHHHHT
T ss_pred CccCCCCCcccCCHHHHHHHHHH
Confidence 58899999954 57788888764
No 199
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=81.75 E-value=1.2 Score=23.67 Aligned_cols=23 Identities=22% Similarity=0.511 Sum_probs=17.9
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhh
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDE 68 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~ee 68 (176)
.|.|+.|++ -.....|..|....
T Consensus 7 ~~~C~~C~k~f~~~~~L~~H~~~h 30 (35)
T 2elx_A 7 GYVCALCLKKFVSSIRLRSHIREV 30 (35)
T ss_dssp SEECSSSCCEESSHHHHHHHHHHT
T ss_pred CeECCCCcchhCCHHHHHHHHHHH
Confidence 599999999 44567888887653
No 200
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=81.39 E-value=0.95 Score=25.09 Aligned_cols=25 Identities=24% Similarity=0.356 Sum_probs=19.4
Q ss_pred cccCCCCCCCC-CHHHHHhhhhhhcc
Q 030491 46 DFPCPYCYEDF-DIASLCSHLEDEHS 70 (176)
Q Consensus 46 ~F~CPFC~e~f-Dv~~L~~H~~eeH~ 70 (176)
.|.|+.|++.| ....|..|....|.
T Consensus 9 ~~~C~~C~k~f~~~~~L~~H~~~~H~ 34 (37)
T 2elm_A 9 LYYCSQCHYSSITKNCLKRHVIQKHS 34 (37)
T ss_dssp EEECSSSSCEEECHHHHHHHHHHHTC
T ss_pred CeECCCCCcccCCHHHHHHHHHHHcc
Confidence 59999999954 67888999555664
No 201
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=81.30 E-value=0.92 Score=23.00 Aligned_cols=22 Identities=27% Similarity=0.702 Sum_probs=16.4
Q ss_pred cccCCCCCCCC-CHHHHHhhhhh
Q 030491 46 DFPCPYCYEDF-DIASLCSHLED 67 (176)
Q Consensus 46 ~F~CPFC~e~f-Dv~~L~~H~~e 67 (176)
.|.|+.|++.| ....|..|...
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~~ 25 (27)
T 2kvh_A 3 PFSCSLCPQRSRDFSAMTKHLRT 25 (27)
T ss_dssp CEECSSSSCEESSHHHHHHHHHH
T ss_pred CccCCCcChhhCCHHHHHHHHHH
Confidence 48999999944 56778888653
No 202
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=80.92 E-value=0.91 Score=25.81 Aligned_cols=32 Identities=22% Similarity=0.237 Sum_probs=21.4
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecC
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCP 79 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCP 79 (176)
.|.|++|++ =-....|..|... |..+ +.-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~ 44 (44)
T 2eoj_A 12 PYECCECGKVFSRKDQLVSHQKT-HSGQ-SGPSSG 44 (44)
T ss_dssp SCEETTTTEECSSHHHHHHHHTT-SSSS-CSCCCC
T ss_pred CeeCCCCCCccCCHHHHHHHHHH-cCCC-CCCCCC
Confidence 599999999 4456778888654 5433 345554
No 203
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=80.89 E-value=1.1 Score=24.41 Aligned_cols=23 Identities=22% Similarity=0.522 Sum_probs=18.2
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhh
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDE 68 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~ee 68 (176)
.|.|++|++ -.....|..|....
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~h 32 (37)
T 2elo_A 9 SYSCPVCEKSFSEDRLIKSHIKTN 32 (37)
T ss_dssp CCEETTTTEECSSHHHHHHHHHHH
T ss_pred CcCCCCCCCccCCHHHHHHHHHHH
Confidence 599999999 45667888898753
No 204
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=80.74 E-value=1.1 Score=28.15 Aligned_cols=28 Identities=29% Similarity=0.489 Sum_probs=22.8
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCC
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCES 73 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~ 73 (176)
.|.|++|++ --....|..|+...|...+
T Consensus 37 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~p 65 (70)
T 1x5w_A 37 PFKCNYCSFDTKQPSNLSKHMKKFHGDMS 65 (70)
T ss_dssp SEECSSSSCEESSHHHHHHHHHHHHSSSC
T ss_pred CEeCCCCCCccCCHHHHHHHHHHHhCCCC
Confidence 599999999 5577899999988876433
No 205
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=80.70 E-value=1.5 Score=24.45 Aligned_cols=24 Identities=29% Similarity=0.628 Sum_probs=17.7
Q ss_pred cccCCCCCCCC-CHHHHHhhhhhhcc
Q 030491 46 DFPCPYCYEDF-DIASLCSHLEDEHS 70 (176)
Q Consensus 46 ~F~CPFC~e~f-Dv~~L~~H~~eeH~ 70 (176)
.|.|+.|++.| ....|..|... |.
T Consensus 11 ~~~C~~C~k~f~~~~~L~~H~~~-H~ 35 (42)
T 2ytb_A 11 PYRCDQCGKAFSQKGSLIVHIRV-HT 35 (42)
T ss_dssp SBCCTTTTCCBSSHHHHHTTGGG-TS
T ss_pred CeeCCCccchhCCHHHHHHHHHH-hC
Confidence 59999999944 56778888764 54
No 206
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=80.70 E-value=0.32 Score=32.25 Aligned_cols=45 Identities=27% Similarity=0.726 Sum_probs=26.4
Q ss_pred CCCCcccCCCCCCCCCHHH-----HHhhhhhhccCC---CcceecCcccccch
Q 030491 42 DVRPDFPCPYCYEDFDIAS-----LCSHLEDEHSCE---SKVTVCPICSVKVA 86 (176)
Q Consensus 42 d~r~~F~CPFC~e~fDv~~-----L~~H~~eeH~~e---~k~vVCPICaa~~s 86 (176)
+....+.||.|.+.|.... -|.|.-=..+.. .....||+|...+.
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~ 63 (78)
T 2ect_A 11 HVGSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSLT 63 (78)
T ss_dssp TSSSSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTTTCSCTTTCCCCC
T ss_pred cCCCCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHcCCcCcCcCCccC
Confidence 4456789999988665331 255532222221 12358999988753
No 207
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=80.45 E-value=0.2 Score=33.38 Aligned_cols=44 Identities=23% Similarity=0.486 Sum_probs=25.0
Q ss_pred CCCCCcccCCCCCCCCCHH-HH--Hhh-----hhhhccCCCcceecCccccc
Q 030491 41 DDVRPDFPCPYCYEDFDIA-SL--CSH-----LEDEHSCESKVTVCPICSVK 84 (176)
Q Consensus 41 dd~r~~F~CPFC~e~fDv~-~L--~~H-----~~eeH~~e~k~vVCPICaa~ 84 (176)
++....+.||.|.+.|... .| |.| |....-.......||+|...
T Consensus 10 ~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~ 61 (74)
T 2yur_A 10 DPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQN 61 (74)
T ss_dssp CCSCGGGSCSSSCCCCTTCEECSSSCCEECTTHHHHHHHHSSSSCCSSSCCS
T ss_pred ccCCCCCCCcCCChHHhCCeEcCCCCCHHHHHHHHHHHHhcCCCcCCCCCCc
Confidence 3556789999998855432 12 223 22222222223579999875
No 208
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=80.21 E-value=0.82 Score=23.25 Aligned_cols=22 Identities=27% Similarity=0.545 Sum_probs=15.6
Q ss_pred cccCCCCCCC-CCHHHHHhhhhh
Q 030491 46 DFPCPYCYED-FDIASLCSHLED 67 (176)
Q Consensus 46 ~F~CPFC~e~-fDv~~L~~H~~e 67 (176)
.|.|+.|++. -....|..|...
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~~ 24 (29)
T 1rik_A 2 KFACPECPKRFMRSDHLTLHILL 24 (29)
T ss_dssp CEECSSSSCEESCSHHHHHHHTG
T ss_pred CccCCCCCchhCCHHHHHHHHHH
Confidence 3788999884 455677778654
No 209
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=79.71 E-value=1.7 Score=23.22 Aligned_cols=22 Identities=32% Similarity=0.623 Sum_probs=17.6
Q ss_pred cccCCCCCCCC-CHHHHHhhhhh
Q 030491 46 DFPCPYCYEDF-DIASLCSHLED 67 (176)
Q Consensus 46 ~F~CPFC~e~f-Dv~~L~~H~~e 67 (176)
.|.|++|++.| ....|..|...
T Consensus 7 ~~~C~~C~k~f~~~~~l~~H~~~ 29 (35)
T 1srk_A 7 PFVCRICLSAFTTKANCARHLKV 29 (35)
T ss_dssp CEECSSSCCEESSHHHHHHHHGG
T ss_pred CeeCCCCCcccCCHHHHHHHHHH
Confidence 59999999944 67788889765
No 210
>2ct5_A Zinc finger BED domain containing protein 1; DREF homolog, putative C-like transposable element, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.6
Probab=79.68 E-value=0.87 Score=31.90 Aligned_cols=30 Identities=23% Similarity=0.460 Sum_probs=22.6
Q ss_pred cceecCcccccc-----hhhHHHHhhhhccchhhh
Q 030491 74 KVTVCPICSVKV-----ARDMLSHITLQHGHLFKL 103 (176)
Q Consensus 74 k~vVCPICaa~~-----s~d~l~HL~~rH~~~~k~ 103 (176)
..++|.+|-..+ +.||.+||...|...|..
T Consensus 28 ~~a~Ck~C~~~l~~~g~TSnL~rHL~~~H~~e~~~ 62 (73)
T 2ct5_A 28 KKIYCRICMAQIAYSGNTSNLSYHLEKNHPEEFCE 62 (73)
T ss_dssp SCCEETTTTEECCCCSSTHHHHHHHHHSCHHHHHH
T ss_pred CEEECCCCCccccCCCChHhHHHHHHHHCHHHHHH
Confidence 456666665554 679999999999887765
No 211
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=79.30 E-value=1.1 Score=25.55 Aligned_cols=31 Identities=19% Similarity=0.278 Sum_probs=20.0
Q ss_pred cccCCCCCCC-CCHHHHHhhhhhhccCCCcceec
Q 030491 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVC 78 (176)
Q Consensus 46 ~F~CPFC~e~-fDv~~L~~H~~eeH~~e~k~vVC 78 (176)
.|.|++|++. -....|..|... |..+ ++-.|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C 43 (44)
T 2yu5_A 12 PFKCSKCDRVFTQRNYLVQHERT-HARK-SGPSS 43 (44)
T ss_dssp SEECSSSSCEESSSHHHHHHHHH-CCCC-CSSCC
T ss_pred CeECCCCCchhCCHHHHHHHhHh-cCCC-CCCCC
Confidence 5889999884 445778888764 5432 34444
No 212
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=79.15 E-value=1.2 Score=23.90 Aligned_cols=22 Identities=32% Similarity=0.523 Sum_probs=17.5
Q ss_pred cccCCCCCCCC-CHHHHHhhhhh
Q 030491 46 DFPCPYCYEDF-DIASLCSHLED 67 (176)
Q Consensus 46 ~F~CPFC~e~f-Dv~~L~~H~~e 67 (176)
.|.|++|++.| ....|..|...
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elt_A 9 PYKCPQCSYASAIKANLNVHLRK 31 (36)
T ss_dssp SEECSSSSCEESSHHHHHHHHHH
T ss_pred CCCCCCCCcccCCHHHHHHHHHH
Confidence 69999999955 56778889764
No 213
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=78.53 E-value=3.7 Score=27.17 Aligned_cols=46 Identities=28% Similarity=0.591 Sum_probs=26.5
Q ss_pred CCCCcccCCCCCCCCCHHH-----H-Hhh-----hhhhccCC-CcceecCcccccchh
Q 030491 42 DVRPDFPCPYCYEDFDIAS-----L-CSH-----LEDEHSCE-SKVTVCPICSVKVAR 87 (176)
Q Consensus 42 d~r~~F~CPFC~e~fDv~~-----L-~~H-----~~eeH~~e-~k~vVCPICaa~~s~ 87 (176)
+....+.||.|.+.|+... | |.| |....-.. .....||+|...+..
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 68 (88)
T 2ct2_A 11 ALREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITRI 68 (88)
T ss_dssp CCCSCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHCSSCBCCTTTCCCBCC
T ss_pred hccCCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcCCCCcCCCCCCCcccc
Confidence 4455799999998766511 1 222 22222111 235789999887643
No 214
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=78.48 E-value=1.9 Score=23.11 Aligned_cols=22 Identities=27% Similarity=0.384 Sum_probs=17.7
Q ss_pred cccCCCCCCCC-CHHHHHhhhhh
Q 030491 46 DFPCPYCYEDF-DIASLCSHLED 67 (176)
Q Consensus 46 ~F~CPFC~e~f-Dv~~L~~H~~e 67 (176)
.|.|+.|++.| ....|..|...
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elr_A 9 THLCDMCGKKFKSKGTLKSHKLL 31 (36)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred CeecCcCCCCcCchHHHHHHHHH
Confidence 69999999965 56778888764
No 215
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=78.21 E-value=0.35 Score=30.87 Aligned_cols=18 Identities=17% Similarity=0.578 Sum_probs=13.1
Q ss_pred CCCCcccCCCCCCCCCHH
Q 030491 42 DVRPDFPCPYCYEDFDIA 59 (176)
Q Consensus 42 d~r~~F~CPFC~e~fDv~ 59 (176)
.....+.||.|.+.+...
T Consensus 11 ~~~~~~~C~IC~~~~~~~ 28 (69)
T 2ea6_A 11 RPSGTVSCPICMDGYSEI 28 (69)
T ss_dssp CTTCCCCCTTTCCCHHHH
T ss_pred CCCCCCCCcccCcccccc
Confidence 344578999999877653
No 216
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=78.03 E-value=1.1 Score=29.22 Aligned_cols=45 Identities=24% Similarity=0.445 Sum_probs=27.1
Q ss_pred CCcccCCCCCCCCCHH-HH-Hhh-----hhhhccCCCcceecCcccccchhhHH
Q 030491 44 RPDFPCPYCYEDFDIA-SL-CSH-----LEDEHSCESKVTVCPICSVKVARDML 90 (176)
Q Consensus 44 r~~F~CPFC~e~fDv~-~L-~~H-----~~eeH~~e~k~vVCPICaa~~s~d~l 90 (176)
...+.||.|.+.+... .| |.| |....- .....||+|...+..+.+
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~--~~~~~CP~Cr~~~~~~~~ 64 (71)
T 2d8t_A 13 LTVPECAICLQTCVHPVSLPCKHVFCYLCVKGAS--WLGKRCALCRQEIPEDFL 64 (71)
T ss_dssp SSCCBCSSSSSBCSSEEEETTTEEEEHHHHHHCT--TCSSBCSSSCCBCCHHHH
T ss_pred CCCCCCccCCcccCCCEEccCCCHHHHHHHHHHH--HCCCcCcCcCchhCHhhc
Confidence 3478999998854432 11 334 333322 223689999998765543
No 217
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=77.77 E-value=0.56 Score=30.72 Aligned_cols=41 Identities=29% Similarity=0.572 Sum_probs=22.8
Q ss_pred CCCcccCCCCCCCCCHHH-----HHhh-----hhhhccCCCcceecCcccccc
Q 030491 43 VRPDFPCPYCYEDFDIAS-----LCSH-----LEDEHSCESKVTVCPICSVKV 85 (176)
Q Consensus 43 ~r~~F~CPFC~e~fDv~~-----L~~H-----~~eeH~~e~k~vVCPICaa~~ 85 (176)
....+.||.|.+.|.... -|.| |....-. ....||+|...+
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~--~~~~CP~Cr~~~ 62 (74)
T 2ep4_A 12 LNLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLE--VRKVCPLCNMPV 62 (74)
T ss_dssp CCCSCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHH--HCSBCTTTCCBC
T ss_pred CCCCCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHH--cCCcCCCcCccc
Confidence 345678999988664321 1333 2222211 123899998765
No 218
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=77.72 E-value=1.8 Score=24.14 Aligned_cols=25 Identities=24% Similarity=0.328 Sum_probs=17.7
Q ss_pred cccCCCCCCC-CCHHHHHhhhhhhccC
Q 030491 46 DFPCPYCYED-FDIASLCSHLEDEHSC 71 (176)
Q Consensus 46 ~F~CPFC~e~-fDv~~L~~H~~eeH~~ 71 (176)
.|.|++|++. -....|..|... |..
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~-H~~ 35 (41)
T 2ept_A 10 VYECQECGKSFRQKGSLTLHERI-HTG 35 (41)
T ss_dssp CEECSSSCCEESSHHHHHHHGGG-CCC
T ss_pred CeECCCCCCCcCCHHHHHHHHHH-hCC
Confidence 5889999994 456778888654 543
No 219
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=77.68 E-value=1.4 Score=23.83 Aligned_cols=22 Identities=23% Similarity=0.505 Sum_probs=17.7
Q ss_pred cccCCCCCCCC-CHHHHHhhhhh
Q 030491 46 DFPCPYCYEDF-DIASLCSHLED 67 (176)
Q Consensus 46 ~F~CPFC~e~f-Dv~~L~~H~~e 67 (176)
.|.|++|++.| ....|..|...
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elq_A 9 PFKCSLCEYATRSKSNLKAHMNR 31 (36)
T ss_dssp SEECSSSSCEESCHHHHHHHHHH
T ss_pred CccCCCCCchhCCHHHHHHHHHH
Confidence 69999999944 67888889754
No 220
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=77.66 E-value=0.53 Score=34.80 Aligned_cols=38 Identities=24% Similarity=0.477 Sum_probs=27.6
Q ss_pred ccCCCCCCCCCHHHHHhhhhhhccC--------------CCcceecCccccc
Q 030491 47 FPCPYCYEDFDIASLCSHLEDEHSC--------------ESKVTVCPICSVK 84 (176)
Q Consensus 47 F~CPFC~e~fDv~~L~~H~~eeH~~--------------e~k~vVCPICaa~ 84 (176)
-.||.||+-+|-.+|++-+...-.+ +.-.-.||+|-.-
T Consensus 9 ~~~PlCG~~L~W~eLIeQML~~en~~ei~kDr~~Fl~~~e~F~FkCP~CgEE 60 (95)
T 2k5c_A 9 AKCPICGSPLKWEELIEEMLIIENFEEIVKDRERFLAQVEEFVFKCPVCGEE 60 (95)
T ss_dssp EECSSSCCEECHHHHHHHSTTCSTHHHHTTCHHHHHHHHHHSEEECTTTCCE
T ss_pred ccCCcCCCccCHHHHHHHHHhhccHHHHHhhHHHHHHHHHHHhhcCCCccHH
Confidence 3699999999999999876554332 1123459999875
No 221
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=77.43 E-value=0.33 Score=31.93 Aligned_cols=44 Identities=23% Similarity=0.514 Sum_probs=26.7
Q ss_pred CCCCCcccCCCCCCCCC-HHHH--Hhh-----hhhhccCCCcceecCcccccch
Q 030491 41 DDVRPDFPCPYCYEDFD-IASL--CSH-----LEDEHSCESKVTVCPICSVKVA 86 (176)
Q Consensus 41 dd~r~~F~CPFC~e~fD-v~~L--~~H-----~~eeH~~e~k~vVCPICaa~~s 86 (176)
+++...+.||.|.+.+. ...| |.| |....-. ....||+|...+.
T Consensus 10 ~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~--~~~~CP~Cr~~~~ 61 (72)
T 2djb_A 10 SELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFY--YSNRCPKCNIVVH 61 (72)
T ss_dssp CCCCGGGSCTTTSSCCSSCEECSSSCCEECHHHHHHHHH--HCSSCTTTCCCCC
T ss_pred hhcCCCCCCCCCChHHHCcCEECCCCCHHHHHHHHHHHH--cCCcCCCcCcccC
Confidence 34566899999988554 2222 333 3333321 1467999988764
No 222
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=77.37 E-value=1.4 Score=22.26 Aligned_cols=22 Identities=14% Similarity=0.294 Sum_probs=15.9
Q ss_pred cccCCCCCCC-CCHHHHHhhhhh
Q 030491 46 DFPCPYCYED-FDIASLCSHLED 67 (176)
Q Consensus 46 ~F~CPFC~e~-fDv~~L~~H~~e 67 (176)
.|.|+.|++. -....|..|...
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~~ 25 (28)
T 2kvf_A 3 PYSCSVCGKRFSLKHQMETHYRV 25 (28)
T ss_dssp SEECSSSCCEESCHHHHHHHHTT
T ss_pred CccCCCCCcccCCHHHHHHHHHh
Confidence 4889999994 445777778653
No 223
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=77.05 E-value=0.27 Score=37.52 Aligned_cols=50 Identities=14% Similarity=0.300 Sum_probs=31.9
Q ss_pred CCCCCCCC-CCCCcccCCCCCC--CCCHHHHHhhhhhhccCCCcceecCcccccchhhHHHHh
Q 030491 34 IDDFEVED-DVRPDFPCPYCYE--DFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHI 93 (176)
Q Consensus 34 ~d~~~~dd-d~r~~F~CPFC~e--~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~s~d~l~HL 93 (176)
+++++.++ +..-.+.|| ||. .+....|-. ...|.|+-|+-.+-.-|.+|-
T Consensus 99 ~~~m~~~e~~~~f~~~Cr-CG~~f~i~~~~l~~---------~~~v~C~sCSl~~~v~~~~~~ 151 (155)
T 2l6l_A 99 LEEMSWNEGDHSFYLSCR-CGGKYSVSKDEAEE---------VSLISCDTCSLIIELLHYNHH 151 (155)
T ss_dssp TTTSEEETTTTEEEEECS-SSCEEEEETTHHHH---------CCEEECSSSSCEEEEECCCCC
T ss_pred HHHhccccCCcEEEEcCC-CCCeEEecHHHhCC---------CCEEECCCCceEEEEEEcccc
Confidence 45554322 334579999 988 556555543 168999999988755555443
No 224
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=77.03 E-value=2.7 Score=22.68 Aligned_cols=26 Identities=31% Similarity=0.640 Sum_probs=18.1
Q ss_pred cccCCCCCCCC-CHHHHHhhhhhhccCC
Q 030491 46 DFPCPYCYEDF-DIASLCSHLEDEHSCE 72 (176)
Q Consensus 46 ~F~CPFC~e~f-Dv~~L~~H~~eeH~~e 72 (176)
.|.|+.|++.| ....|..|.. .|..+
T Consensus 2 p~~C~~C~k~F~~~~~L~~H~~-~H~~~ 28 (33)
T 1rim_A 2 KFACPECPKRFMRSDHLSKHIT-LHELL 28 (33)
T ss_dssp CCCCSSSCCCCSSHHHHHHHHH-HHTTT
T ss_pred cccCCCCCchhCCHHHHHHHHH-HhCCC
Confidence 37899999944 6677888875 35443
No 225
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=76.57 E-value=1.1 Score=25.83 Aligned_cols=32 Identities=28% Similarity=0.387 Sum_probs=20.3
Q ss_pred cccCCCCCCCC-CHHHHHhhhhhhccCCCcceecC
Q 030491 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCP 79 (176)
Q Consensus 46 ~F~CPFC~e~f-Dv~~L~~H~~eeH~~e~k~vVCP 79 (176)
.|.|++|++.| ....|..|... |..+ +.-.||
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-~~~~C~ 44 (46)
T 2en3_A 12 PFQCKECGMNFSWSCSLFKHLRS-HERT-DPSGPS 44 (46)
T ss_dssp SEECSSSCCEESSSHHHHHHHHH-HHHS-CCSSCS
T ss_pred CeeCcccChhhCCHHHHHHHHHH-hCCC-CCCCCC
Confidence 58899998844 55778888754 4322 344454
No 226
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=76.41 E-value=2.3 Score=23.69 Aligned_cols=22 Identities=27% Similarity=0.554 Sum_probs=16.7
Q ss_pred cccCCCCCCCC-CHHHHHhhhhh
Q 030491 46 DFPCPYCYEDF-DIASLCSHLED 67 (176)
Q Consensus 46 ~F~CPFC~e~f-Dv~~L~~H~~e 67 (176)
.|.|++|++.| ....|..|...
T Consensus 11 ~~~C~~C~k~f~~~~~l~~H~~~ 33 (42)
T 2epc_A 11 PYLCGQCGKSFTQRGSLAVHQRS 33 (42)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH
T ss_pred CeECCCCCcccCCHHHHHHHhhh
Confidence 58999999944 66778888754
No 227
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=76.22 E-value=1.8 Score=23.38 Aligned_cols=22 Identities=14% Similarity=0.120 Sum_probs=17.1
Q ss_pred cccCCCCCC-CCCHHHHHhhhhh
Q 030491 46 DFPCPYCYE-DFDIASLCSHLED 67 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~e 67 (176)
.|.|+.|+. -.....|..|...
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elv_A 9 LYDCHICERKFKNELDRDRHMLV 31 (36)
T ss_dssp CEECSSSCCEESSHHHHHHHHTT
T ss_pred CeECCCCCCccCCHHHHHHHHHH
Confidence 699999999 4556678888754
No 228
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=76.02 E-value=1.5 Score=26.15 Aligned_cols=24 Identities=21% Similarity=0.485 Sum_probs=19.5
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEH 69 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH 69 (176)
.|.|++|+. --....|..|+...|
T Consensus 29 ~~~C~~C~~~f~~~~~l~~H~~~h~ 53 (57)
T 1bbo_A 29 PYHCTYCNFSFKTKGNLTKHMKSKA 53 (57)
T ss_dssp CEECSSSSCEESSHHHHHHHHHSSS
T ss_pred CccCCCCCchhcCHHHHHHHHHHhc
Confidence 599999999 456788999986554
No 229
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=75.78 E-value=0.33 Score=31.36 Aligned_cols=45 Identities=18% Similarity=0.394 Sum_probs=26.1
Q ss_pred CCCCcccCCCCCCCCCHH--HHHhh-----hhhhccCCCcceecCcccccchh
Q 030491 42 DVRPDFPCPYCYEDFDIA--SLCSH-----LEDEHSCESKVTVCPICSVKVAR 87 (176)
Q Consensus 42 d~r~~F~CPFC~e~fDv~--~L~~H-----~~eeH~~e~k~vVCPICaa~~s~ 87 (176)
+....|.||.|.+.+... --|.| |....-. .....||+|...+..
T Consensus 11 ~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~-~~~~~CP~Cr~~~~~ 62 (66)
T 2ecy_A 11 TVEDKYKCEKCHLVLCSPKQTECGHRFCESCMAALLS-SSSPKCTACQESIVK 62 (66)
T ss_dssp SCCCCEECTTTCCEESSCCCCSSSCCCCHHHHHHHHT-TSSCCCTTTCCCCCT
T ss_pred cCCcCCCCCCCChHhcCeeECCCCCHHHHHHHHHHHH-hCcCCCCCCCcCCCh
Confidence 456689999998743321 12222 3333221 445689999887643
No 230
>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}
Probab=75.67 E-value=0.78 Score=30.56 Aligned_cols=46 Identities=26% Similarity=0.603 Sum_probs=27.1
Q ss_pred cccCC-CCCCCCCHHHHHhhhhhhccCCCcceecCcccccc-hhhHHHHh
Q 030491 46 DFPCP-YCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKV-ARDMLSHI 93 (176)
Q Consensus 46 ~F~CP-FC~e~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~-s~d~l~HL 93 (176)
.-.|| .|++.+-...|-.|+..+ -..+.+.|+.|...+ ..++..|.
T Consensus 16 ~v~C~~~C~~~v~r~~l~~H~~~~--C~~r~v~C~~C~~~~~~~~l~~H~ 63 (76)
T 2yuc_A 16 VIPCPNRCPMKLSRRDLPAHLQHD--CPKRRLKCEFCGCDFSGEAYESHE 63 (76)
T ss_dssp CCBCTTCCSCBCCSSSSTTTTTTS--CTTSCCCCSSSCCCCCHHHHHHTT
T ss_pred ccCCCccccHHhhHhHHHhhCHhh--CCCcceECCCCCCccCHHHHHHHH
Confidence 45664 577766666666666532 234566777776643 44555555
No 231
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=75.59 E-value=1.9 Score=27.23 Aligned_cols=24 Identities=17% Similarity=0.227 Sum_probs=19.6
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhc
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEH 69 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH 69 (176)
.|.|++|++ -.....|..|+...+
T Consensus 42 ~~~C~~C~~~f~~~~~L~~H~~~H~ 66 (72)
T 1x6e_A 42 PYKCLECGKAFSQNSGLINHQRIHT 66 (72)
T ss_dssp CEECSSSCCEESSHHHHHHHHHHHH
T ss_pred CeECCCCCcccCCHHHHHHHHHhcC
Confidence 699999999 556788999987643
No 232
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=75.07 E-value=0.69 Score=32.28 Aligned_cols=31 Identities=13% Similarity=0.535 Sum_probs=23.3
Q ss_pred CCCcccCCCCCCCCCHHHHHhhhhhhccCCCcceecCcccccc
Q 030491 43 VRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKV 85 (176)
Q Consensus 43 ~r~~F~CPFC~e~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~ 85 (176)
..-.|.|+-||..|++. +...+.||-|-.++
T Consensus 25 ~~v~Y~C~~CG~~~e~~------------~~d~irCp~CG~RI 55 (70)
T 1twf_L 25 ATLKYICAECSSKLSLS------------RTDAVRCKDCGHRI 55 (70)
T ss_dssp CCCCEECSSSCCEECCC------------TTSTTCCSSSCCCC
T ss_pred ceEEEECCCCCCcceeC------------CCCCccCCCCCceE
Confidence 45689999999977653 23467999998754
No 233
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=76.91 E-value=0.61 Score=23.89 Aligned_cols=22 Identities=23% Similarity=0.484 Sum_probs=15.8
Q ss_pred cccCCCCCCCCC-HHHHHhhhhh
Q 030491 46 DFPCPYCYEDFD-IASLCSHLED 67 (176)
Q Consensus 46 ~F~CPFC~e~fD-v~~L~~H~~e 67 (176)
.|.|++|++.|. ...|..|...
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~~ 25 (30)
T 2lvr_A 3 PYVCIHCQRQFADPGALQRHVRI 25 (30)
Confidence 488999999554 4667777654
No 234
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=74.76 E-value=1.1 Score=22.90 Aligned_cols=21 Identities=29% Similarity=0.797 Sum_probs=15.4
Q ss_pred cccCCCCCCCC-CHHHHHhhhh
Q 030491 46 DFPCPYCYEDF-DIASLCSHLE 66 (176)
Q Consensus 46 ~F~CPFC~e~f-Dv~~L~~H~~ 66 (176)
.|.|+.|++.| ....|..|..
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~ 24 (27)
T 2kvg_A 3 PYRCPLCRAGCPSLASMQAHMR 24 (27)
T ss_dssp TEEETTTTEEESCHHHHHHHHT
T ss_pred CcCCCCCCcccCCHHHHHHHHH
Confidence 48899999844 5567778864
No 235
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=72.75 E-value=0.55 Score=32.60 Aligned_cols=49 Identities=14% Similarity=0.469 Sum_probs=30.3
Q ss_pred cccCCCCCCCCCHHHH-----Hhh-----hhhhccC----C--CcceecCc--cccc--chhhHHHHhh
Q 030491 46 DFPCPYCYEDFDIASL-----CSH-----LEDEHSC----E--SKVTVCPI--CSVK--VARDMLSHIT 94 (176)
Q Consensus 46 ~F~CPFC~e~fDv~~L-----~~H-----~~eeH~~----e--~k~vVCPI--Caa~--~s~d~l~HL~ 94 (176)
.|.||.|.+.+..... |.| |-..|-. + ..++.||. |... +..+.+.-+.
T Consensus 5 ~~~C~IC~~~~~~~~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~~~~~~~~i~~ll 73 (94)
T 1wim_A 5 SSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQGHLQENEIECMV 73 (94)
T ss_dssp BCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSCCEECHHHHHHHS
T ss_pred CcCCcccCcccccccceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCCCccCHHHHHHHC
Confidence 7889999887665432 444 3333321 1 24689999 9988 7666555443
No 236
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=74.79 E-value=0.76 Score=23.57 Aligned_cols=22 Identities=27% Similarity=0.602 Sum_probs=15.5
Q ss_pred cccCCCCCCCC-CHHHHHhhhhh
Q 030491 46 DFPCPYCYEDF-DIASLCSHLED 67 (176)
Q Consensus 46 ~F~CPFC~e~f-Dv~~L~~H~~e 67 (176)
.|.|+.|++.| ....|..|...
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~~ 24 (29)
T 2lvt_A 2 PCQCVMCGKAFTQASSLIAHVRQ 24 (29)
Confidence 37899999855 45667777653
No 237
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=72.27 E-value=3.2 Score=22.93 Aligned_cols=25 Identities=20% Similarity=0.606 Sum_probs=18.7
Q ss_pred cccCCCCCCC-CCHHHHHhhhhhhccC
Q 030491 46 DFPCPYCYED-FDIASLCSHLEDEHSC 71 (176)
Q Consensus 46 ~F~CPFC~e~-fDv~~L~~H~~eeH~~ 71 (176)
.|.|+.|++. .....|..|... |..
T Consensus 6 ~~~C~~C~k~f~~~~~L~~H~~~-H~~ 31 (39)
T 1njq_A 6 SYTCSFCKREFRSAQALGGHMNV-HRR 31 (39)
T ss_dssp SEECTTTCCEESSHHHHHHHHHT-TCC
T ss_pred ceECCCCCcccCCHHHHHHHHHH-cCC
Confidence 5999999994 466778889764 443
No 238
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=72.25 E-value=1.2 Score=31.87 Aligned_cols=38 Identities=16% Similarity=0.142 Sum_probs=29.4
Q ss_pred cccCCCCCCCC-CHHHHHhhhhhhccCCCcceecCccccc
Q 030491 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPICSVK 84 (176)
Q Consensus 46 ~F~CPFC~e~f-Dv~~L~~H~~eeH~~e~k~vVCPICaa~ 84 (176)
.|.|+.|++.| ....|..|....|..+ ++-.|.||-..
T Consensus 50 pf~C~~Cgk~F~~~~~L~~H~~r~Htge-kpy~C~~~~~~ 88 (102)
T 2ghf_A 50 SYVCVECNFLTKRYDALSEHNLKYHPGE-ENFKLTMVKRN 88 (102)
T ss_dssp CEEETTTTEEESSTHHHHTHHHHTSTTC-CCEEEEECCCS
T ss_pred CcCCCCCCcccCCHHHHHHHHHHhcCCC-CCeeCCcccCC
Confidence 59999999954 6678999966678654 67889986543
No 239
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=74.46 E-value=0.79 Score=23.06 Aligned_cols=21 Identities=24% Similarity=0.610 Sum_probs=15.0
Q ss_pred cccCCCCCCCCC-HHHHHhhhh
Q 030491 46 DFPCPYCYEDFD-IASLCSHLE 66 (176)
Q Consensus 46 ~F~CPFC~e~fD-v~~L~~H~~ 66 (176)
.|.|+.|++.|. ...|..|..
T Consensus 2 p~~C~~C~k~f~~~~~l~~H~~ 23 (26)
T 2lvu_A 2 PYVCERCGKRFVQSSQLANHIR 23 (26)
Confidence 378999998665 466777754
No 240
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=71.79 E-value=2.3 Score=27.91 Aligned_cols=14 Identities=36% Similarity=0.992 Sum_probs=11.1
Q ss_pred CCCCCcccCCCCCC
Q 030491 41 DDVRPDFPCPYCYE 54 (176)
Q Consensus 41 dd~r~~F~CPFC~e 54 (176)
+|++..|.||.|+.
T Consensus 31 ~~lP~dw~CP~Cg~ 44 (52)
T 1e8j_A 31 EDLPDDWACPVCGA 44 (52)
T ss_dssp TSSCTTCCCSSSCC
T ss_pred HHCCCCCcCCCCCC
Confidence 35677899999986
No 241
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=71.58 E-value=3.4 Score=23.48 Aligned_cols=25 Identities=20% Similarity=0.315 Sum_probs=19.4
Q ss_pred cccCCCCCCC-CCHHHHHhhhhhhccC
Q 030491 46 DFPCPYCYED-FDIASLCSHLEDEHSC 71 (176)
Q Consensus 46 ~F~CPFC~e~-fDv~~L~~H~~eeH~~ 71 (176)
.|.|+.|++. -....|..|... |..
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~ 37 (44)
T 2epv_A 12 PYECNECGKAFIWKSLLIVHERT-HAG 37 (44)
T ss_dssp SEECSSSCCEESSHHHHHHHHGG-GSS
T ss_pred CeECCCCCcccCchHHHHHHHhH-hcC
Confidence 6999999994 467889999764 543
No 242
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=70.98 E-value=6.6 Score=25.03 Aligned_cols=43 Identities=23% Similarity=0.532 Sum_probs=22.9
Q ss_pred CCCCcccCCCCCCCCCHH-----HHHhh-----hhhhccCCCcceecCcccccch
Q 030491 42 DVRPDFPCPYCYEDFDIA-----SLCSH-----LEDEHSCESKVTVCPICSVKVA 86 (176)
Q Consensus 42 d~r~~F~CPFC~e~fDv~-----~L~~H-----~~eeH~~e~k~vVCPICaa~~s 86 (176)
+......||.|.+.|... --|.| |....-. +...||+|...+.
T Consensus 10 ~~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~--~~~~CP~Cr~~~~ 62 (69)
T 2kiz_A 10 EEDTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLI--TNKKCPICRVDIE 62 (69)
T ss_dssp STTCCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHH--HCSBCTTTCSBSC
T ss_pred cCCCCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHH--cCCCCcCcCcccc
Confidence 344578899997765321 11333 2221111 1235999987754
No 243
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=70.83 E-value=1.5 Score=34.70 Aligned_cols=27 Identities=22% Similarity=0.625 Sum_probs=18.8
Q ss_pred CCcccCCCCCCCCCHHHHHhhhhhhccCCCcceecCccccc
Q 030491 44 RPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVK 84 (176)
Q Consensus 44 r~~F~CPFC~e~fDv~~L~~H~~eeH~~e~k~vVCPICaa~ 84 (176)
...|.||.||--++ + .-+.+||||.+.
T Consensus 136 ~~~~~C~~CG~i~~--~------------~~p~~CP~Cg~~ 162 (170)
T 3pwf_A 136 KKVYICPICGYTAV--D------------EAPEYCPVCGAP 162 (170)
T ss_dssp SCEEECTTTCCEEE--S------------CCCSBCTTTCCB
T ss_pred CCeeEeCCCCCeeC--C------------CCCCCCCCCCCC
Confidence 35899999998333 0 233499999864
No 244
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=70.58 E-value=1 Score=31.82 Aligned_cols=18 Identities=22% Similarity=0.556 Sum_probs=13.7
Q ss_pred CCCCCCcccCCCCCC-CCC
Q 030491 40 EDDVRPDFPCPYCYE-DFD 57 (176)
Q Consensus 40 ddd~r~~F~CPFC~e-~fD 57 (176)
|..+...|+||||+. .+-
T Consensus 21 e~~q~~ky~C~fCgk~~vk 39 (73)
T 1ffk_W 21 EIKHKKKYKCPVCGFPKLK 39 (73)
T ss_pred HHhcccCccCCCCCCceeE
Confidence 335688999999998 543
No 245
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=70.37 E-value=0.94 Score=28.72 Aligned_cols=42 Identities=21% Similarity=0.403 Sum_probs=24.9
Q ss_pred CcccCCCCCCCCCHHH--HHhhhhhhccCCCcceecCcccccch
Q 030491 45 PDFPCPYCYEDFDIAS--LCSHLEDEHSCESKVTVCPICSVKVA 86 (176)
Q Consensus 45 ~~F~CPFC~e~fDv~~--L~~H~~eeH~~e~k~vVCPICaa~~s 86 (176)
..+.||.|.+.|.... =|.|.-=..........||+|...+.
T Consensus 5 ~~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~~~~~CP~Cr~~~~ 48 (56)
T 1bor_A 5 QFLRCQQCQAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWP 48 (56)
T ss_dssp CCSSCSSSCSSCBCCSCSTTSCCSBTTTCSSSSSSCSSCCSSSS
T ss_pred cCCCceEeCCccCCeEEcCCCCcccHHHHccCCCCCCcCCcEee
Confidence 4688999988544321 13443222333445678999987653
No 246
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=70.16 E-value=1 Score=33.25 Aligned_cols=12 Identities=50% Similarity=1.068 Sum_probs=10.1
Q ss_pred CcccCCCCCCCC
Q 030491 45 PDFPCPYCYEDF 56 (176)
Q Consensus 45 ~~F~CPFC~e~f 56 (176)
-.|.||-|||+|
T Consensus 50 F~FkCP~CgEEF 61 (95)
T 2k5c_A 50 FVFKCPVCGEEF 61 (95)
T ss_dssp SEEECTTTCCEE
T ss_pred HhhcCCCccHHH
Confidence 369999999965
No 247
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=70.11 E-value=3.7 Score=27.77 Aligned_cols=26 Identities=35% Similarity=0.580 Sum_probs=21.7
Q ss_pred cccCCCCCCCC-CHHHHHhhhhhhccC
Q 030491 46 DFPCPYCYEDF-DIASLCSHLEDEHSC 71 (176)
Q Consensus 46 ~F~CPFC~e~f-Dv~~L~~H~~eeH~~ 71 (176)
.|.|++|++.| ....|..|+...|..
T Consensus 54 ~~~C~~C~k~F~~~~~L~~H~~~h~~~ 80 (98)
T 2gqj_A 54 ALKCQHCRKQFKSKAGLNYHTMAEHSA 80 (98)
T ss_dssp HHSCSSSCCCCSCHHHHHHHHHHHSCS
T ss_pred CEECCCCCCccCCHHHHHHHHHHHcCC
Confidence 69999999955 678899999887754
No 248
>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}
Probab=69.95 E-value=3.1 Score=27.53 Aligned_cols=33 Identities=21% Similarity=0.393 Sum_probs=24.3
Q ss_pred CCcccCCCCCCCCCHHHHHhhhhhhccCCCcceecC
Q 030491 44 RPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCP 79 (176)
Q Consensus 44 r~~F~CPFC~e~fDv~~L~~H~~eeH~~e~k~vVCP 79 (176)
...-.|+||+..+-...|-.|.+ + -....+.||
T Consensus 42 ~r~v~C~~C~~~~~~~~l~~H~~-~--Cp~~~v~C~ 74 (76)
T 2yuc_A 42 KRRLKCEFCGCDFSGEAYESHEG-M--CPQESSGPS 74 (76)
T ss_dssp TSCCCCSSSCCCCCHHHHHHTTT-S--CTTSSCCCS
T ss_pred CcceECCCCCCccCHHHHHHHHh-H--CCCCccCCC
Confidence 34688999999999999999983 2 233445565
No 249
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=69.92 E-value=3.8 Score=22.89 Aligned_cols=25 Identities=36% Similarity=0.752 Sum_probs=18.8
Q ss_pred cccCCCCCCCC-CHHHHHhhhhhhccC
Q 030491 46 DFPCPYCYEDF-DIASLCSHLEDEHSC 71 (176)
Q Consensus 46 ~F~CPFC~e~f-Dv~~L~~H~~eeH~~ 71 (176)
.|.|+.|++.| ....|..|... |..
T Consensus 11 ~~~C~~C~k~f~~~~~L~~H~~~-H~~ 36 (42)
T 2eos_A 11 PYPCEICGTRFRHLQTLKSHLRI-HTG 36 (42)
T ss_dssp CBCCSSSCCCBSSHHHHHHHTTT-TSC
T ss_pred CEECCCCCCccCCHHHHHHHHHh-cCC
Confidence 69999999955 56778889764 443
No 250
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=69.90 E-value=2.6 Score=23.55 Aligned_cols=25 Identities=24% Similarity=0.440 Sum_probs=19.3
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccC
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSC 71 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~ 71 (176)
.|.|++|++ --....|..|.. .|..
T Consensus 11 ~~~C~~C~k~f~~~~~L~~H~~-~H~~ 36 (42)
T 2en2_A 11 PYKCETCGARFVQVAHLRAHVL-IHTG 36 (42)
T ss_dssp SEECTTTCCEESSHHHHHHHTH-HHHS
T ss_pred CEeCCCcChhhCCHHHHHHHHH-HcCC
Confidence 699999999 456788889986 4543
No 251
>2l7x_A Envelope glycoprotein; cytoplasmic tail, viral protein; NMR {Crimean-congo hemorrhagic fever virus}
Probab=68.93 E-value=1.6 Score=31.29 Aligned_cols=21 Identities=29% Similarity=0.634 Sum_probs=18.2
Q ss_pred cccCCCCCCCCCHHHHHhhhh
Q 030491 46 DFPCPYCYEDFDIASLCSHLE 66 (176)
Q Consensus 46 ~F~CPFC~e~fDv~~L~~H~~ 66 (176)
.=-||||+--+...+|..|+-
T Consensus 30 ~NiCPYC~nRls~eGl~RHV~ 50 (77)
T 2l7x_A 30 YNICPYCASRLTSDGLARHVT 50 (77)
T ss_dssp TTCCTTTCCCCCTTTHHHHHT
T ss_pred cccChhhhccCCccchhhhcc
Confidence 346999999999999999974
No 252
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=67.87 E-value=3.9 Score=26.45 Aligned_cols=27 Identities=26% Similarity=0.410 Sum_probs=20.9
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCC
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCES 73 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~ 73 (176)
.|.|+.||+ =-....|..|.. .|..++
T Consensus 32 p~~C~~C~k~F~~~~~L~~H~~-~Htgep 59 (60)
T 4gzn_C 32 PRSCPECGKCFRDQSEVNRHLK-VHQNKP 59 (60)
T ss_dssp CEECTTTCCEESSHHHHHHHGG-GGSCC-
T ss_pred CeECCCCCCCcCCHHHHHHHhC-ccCCCC
Confidence 699999999 556788999976 576654
No 253
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=67.33 E-value=1.7 Score=30.82 Aligned_cols=43 Identities=23% Similarity=0.487 Sum_probs=26.1
Q ss_pred CCcccCCCCCCCCCHH--HHHhh-----hhhhccCCCcceecCcccccchh
Q 030491 44 RPDFPCPYCYEDFDIA--SLCSH-----LEDEHSCESKVTVCPICSVKVAR 87 (176)
Q Consensus 44 r~~F~CPFC~e~fDv~--~L~~H-----~~eeH~~e~k~vVCPICaa~~s~ 87 (176)
...|.||.|.+.|... --|.| |..... ......||+|...+..
T Consensus 13 ~~~~~C~iC~~~~~~p~~~~CgH~fC~~Ci~~~~-~~~~~~CP~Cr~~~~~ 62 (115)
T 3l11_A 13 LSECQCGICMEILVEPVTLPCNHTLCKPCFQSTV-EKASLCCPFCRRRVSS 62 (115)
T ss_dssp HHHHBCTTTCSBCSSCEECTTSCEECHHHHCCCC-CTTTSBCTTTCCBCHH
T ss_pred CCCCCCccCCcccCceeEcCCCCHHhHHHHHHHH-hHCcCCCCCCCcccCc
Confidence 3479999998844421 12333 443333 2335789999988754
No 254
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=67.21 E-value=0.7 Score=33.45 Aligned_cols=42 Identities=24% Similarity=0.475 Sum_probs=24.9
Q ss_pred CCcccCCCCCCCCCHHH--HH-----hhhhhhccCCCcceecCcccccch
Q 030491 44 RPDFPCPYCYEDFDIAS--LC-----SHLEDEHSCESKVTVCPICSVKVA 86 (176)
Q Consensus 44 r~~F~CPFC~e~fDv~~--L~-----~H~~eeH~~e~k~vVCPICaa~~s 86 (176)
...|.||.|.+.|.... -| ..|...+-. .....||+|...++
T Consensus 50 ~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~-~~~~~CP~Cr~~~~ 98 (124)
T 3fl2_A 50 EETFQCICCQELVFRPITTVCQHNVCKDCLDRSFR-AQVFSCPACRYDLG 98 (124)
T ss_dssp HHHTBCTTTSSBCSSEEECTTSCEEEHHHHHHHHH-TTCCBCTTTCCBCC
T ss_pred ccCCCCCcCChHHcCcEEeeCCCcccHHHHHHHHh-HCcCCCCCCCccCC
Confidence 34789999988554321 12 224433332 34568999988764
No 255
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=66.89 E-value=1.2 Score=34.16 Aligned_cols=29 Identities=31% Similarity=0.590 Sum_probs=21.6
Q ss_pred CCcccCCCCCCCCCHHHHHhhhhhhccCCCcceecCcccccc
Q 030491 44 RPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKV 85 (176)
Q Consensus 44 r~~F~CPFC~e~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~ 85 (176)
.-.|.|+-||+.|+.. .....||.|-..+
T Consensus 130 ~~~y~C~~Cg~~~~~~-------------~~~~~Cp~CG~~~ 158 (165)
T 2lcq_A 130 KWRYVCIGCGRKFSTL-------------PPGGVCPDCGSKV 158 (165)
T ss_dssp CCCEEESSSCCEESSC-------------CGGGBCTTTCCBE
T ss_pred cEEEECCCCCCcccCC-------------CCCCcCCCCCCcc
Confidence 3579999999976533 3456999998753
No 256
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=66.42 E-value=4.2 Score=25.79 Aligned_cols=25 Identities=20% Similarity=0.360 Sum_probs=19.9
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccC
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSC 71 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~ 71 (176)
.|.|++|+. --....|..|+.. |..
T Consensus 46 ~~~C~~C~~~f~~~~~L~~H~~~-H~~ 71 (77)
T 2cot_A 46 PYKCDECGKAFIQRSHLIGHHRV-HTG 71 (77)
T ss_dssp SEECSSSCCEESSHHHHHHHGGG-SCC
T ss_pred CeeCCCCCCccCCHHHHHHHHHH-hCC
Confidence 599999999 5567889999865 543
No 257
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=66.38 E-value=1.9 Score=37.04 Aligned_cols=37 Identities=27% Similarity=0.563 Sum_probs=24.4
Q ss_pred CCcccCCCCCCC-------------CCHHHHHhhhhhhccCCCcceecCc--ccccc
Q 030491 44 RPDFPCPYCYED-------------FDIASLCSHLEDEHSCESKVTVCPI--CSVKV 85 (176)
Q Consensus 44 r~~F~CPFC~e~-------------fDv~~L~~H~~eeH~~e~k~vVCPI--Caa~~ 85 (176)
...|.||.|.+- |+...+..++. +.....||| |...+
T Consensus 179 ~~el~CPIcl~~f~DPVts~~CGHsFcR~cI~~~~~-----~~~~~~CPvtGCr~~l 230 (267)
T 3htk_C 179 KIELTCPITCKPYEAPLISRKCNHVFDRDGIQNYLQ-----GYTTRDCPQAACSQVV 230 (267)
T ss_dssp BCCSBCTTTSSBCSSEEEESSSCCEEEHHHHHHHST-----TCSCEECSGGGCSCEE
T ss_pred ceeeECcCccCcccCCeeeCCCCCcccHHHHHHHHH-----hCCCCCCCcccccCcC
Confidence 578999999763 33444444433 334589999 98875
No 258
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=66.12 E-value=3.8 Score=24.52 Aligned_cols=25 Identities=32% Similarity=0.507 Sum_probs=19.2
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccC
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSC 71 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~ 71 (176)
.|.|+.|++ --....|..|... |..
T Consensus 24 ~~~C~~C~k~f~~~~~L~~H~~~-H~~ 49 (54)
T 1yui_A 24 PATCPICYAVIRQSRNLRRHLEL-RHF 49 (54)
T ss_dssp CEECTTTCCEESSHHHHHHHHHH-HTT
T ss_pred CccCCCCCcccCCHHHHHHHHHH-hcc
Confidence 699999999 4567788999864 443
No 259
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=65.38 E-value=6.2 Score=26.27 Aligned_cols=35 Identities=23% Similarity=0.362 Sum_probs=24.6
Q ss_pred cccCCCCCCCC-CHHHHHhhhhhhccCCCcceecCcccc
Q 030491 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPICSV 83 (176)
Q Consensus 46 ~F~CPFC~e~f-Dv~~L~~H~~eeH~~e~k~vVCPICaa 83 (176)
-|.|+.|++.| ....|..|... |..+ ...|-+|..
T Consensus 13 py~C~~CgK~F~~~s~L~~H~r~-Htg~--~~~~~~~~~ 48 (66)
T 2epp_A 13 ILPCGLCGKVFTDANRLRQHEAQ-HGVT--SLQLGYIDL 48 (66)
T ss_dssp CCCCTTTCCCCSCHHHHHHHHHH-HTTT--SCCCCSCCC
T ss_pred CcCCCCCCCccCCHHHHHhhhhh-hCCC--ccccccccC
Confidence 59999999955 56789999876 5543 345556654
No 260
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=64.56 E-value=2.4 Score=27.33 Aligned_cols=12 Identities=33% Similarity=0.805 Sum_probs=6.2
Q ss_pred CCCcccCCCCCC
Q 030491 43 VRPDFPCPYCYE 54 (176)
Q Consensus 43 ~r~~F~CPFC~e 54 (176)
+...+.||.|+.
T Consensus 27 lP~dw~CP~Cg~ 38 (46)
T 6rxn_A 27 LPDDWCCPVCGV 38 (46)
T ss_dssp SCTTCBCTTTCC
T ss_pred CCCCCcCcCCCC
Confidence 444555555554
No 261
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=64.33 E-value=5 Score=23.52 Aligned_cols=21 Identities=38% Similarity=0.676 Sum_probs=11.8
Q ss_pred cccCCCCCC-CCCHHHHHhhhh
Q 030491 46 DFPCPYCYE-DFDIASLCSHLE 66 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~ 66 (176)
.|.||.|.. -=|...|..|.+
T Consensus 3 k~~CpvCk~q~Pd~kt~~~H~e 24 (28)
T 2jvx_A 3 DFCCPKCQYQAPDMDTLQIHVM 24 (28)
T ss_dssp CEECTTSSCEESSHHHHHHHHH
T ss_pred cccCccccccCcChHHHHHHHH
Confidence 455666655 555555555544
No 262
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=64.30 E-value=0.85 Score=29.30 Aligned_cols=39 Identities=23% Similarity=0.664 Sum_probs=23.0
Q ss_pred cccCCCCCCCCCHHH---------HHhh-----hhhhccCCCcceecCcccccch
Q 030491 46 DFPCPYCYEDFDIAS---------LCSH-----LEDEHSCESKVTVCPICSVKVA 86 (176)
Q Consensus 46 ~F~CPFC~e~fDv~~---------L~~H-----~~eeH~~e~k~vVCPICaa~~s 86 (176)
.+.||.|.+.+.... -|.| |....-. ....||+|...+.
T Consensus 10 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~--~~~~CP~Cr~~~~ 62 (71)
T 3ng2_A 10 TVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLK--NANTCPTCRKKIN 62 (71)
T ss_dssp CCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHH--HCSBCTTTCCBCC
T ss_pred CCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHH--cCCCCCCCCCccC
Confidence 688999998776531 1333 3322211 2248999988764
No 263
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=63.99 E-value=2.3 Score=30.04 Aligned_cols=13 Identities=15% Similarity=0.772 Sum_probs=11.1
Q ss_pred CCCCcccCCCCCC
Q 030491 42 DVRPDFPCPYCYE 54 (176)
Q Consensus 42 d~r~~F~CPFC~e 54 (176)
.+...|.|||||.
T Consensus 22 ~q~~ky~C~fCgk 34 (72)
T 3jyw_9 22 QQHARYDCSFCGK 34 (72)
T ss_dssp HHHSCBCCSSCCS
T ss_pred HhccCccCCCCCC
Confidence 4567899999998
No 264
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=63.95 E-value=5.3 Score=27.78 Aligned_cols=32 Identities=22% Similarity=0.565 Sum_probs=20.4
Q ss_pred CCCCCCHHHHHhhhhhhccCCCcceecCc--cccc
Q 030491 52 CYEDFDIASLCSHLEDEHSCESKVTVCPI--CSVK 84 (176)
Q Consensus 52 C~e~fDv~~L~~H~~eeH~~e~k~vVCPI--Caa~ 84 (176)
||-.|+...+..++...+. ......||+ |...
T Consensus 26 cGh~f~r~cI~~~l~~~~~-~~~~~~CP~tgc~~~ 59 (94)
T 2yu4_A 26 CGHTYEEDAIVRMIESRQK-RKKKAYCPQIGCSHT 59 (94)
T ss_dssp SCCEEEHHHHHHHHHHHHT-TTCCBCCCSTTCCCC
T ss_pred CCCeecHHHHHHHHHHccC-cCCCCCCCcCcCccc
Confidence 4445667777777766542 224578999 9744
No 265
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=63.86 E-value=13 Score=26.50 Aligned_cols=45 Identities=18% Similarity=0.373 Sum_probs=25.0
Q ss_pred CCCCCcccCCCCCCCCCHHH--HHhh-----hhhhccCCCcceecCcccccch
Q 030491 41 DDVRPDFPCPYCYEDFDIAS--LCSH-----LEDEHSCESKVTVCPICSVKVA 86 (176)
Q Consensus 41 dd~r~~F~CPFC~e~fDv~~--L~~H-----~~eeH~~e~k~vVCPICaa~~s 86 (176)
+.....|.||.|.+.+.... -|.| |....-. .....||+|...+.
T Consensus 13 ~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~-~~~~~CP~Cr~~~~ 64 (118)
T 3hct_A 13 PPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIR-DAGHKCPVDNEILL 64 (118)
T ss_dssp SCCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHH-HHCSBCTTTCCBCC
T ss_pred cCCCCCCCCCcCChhhcCeEECCcCChhhHHHHHHHHh-hCCCCCCCCCCCcC
Confidence 35667899999988554321 1223 2222111 11238999988753
No 266
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=63.67 E-value=2.3 Score=30.82 Aligned_cols=13 Identities=31% Similarity=0.846 Sum_probs=11.1
Q ss_pred CCCCcccCCCCCC
Q 030491 42 DVRPDFPCPYCYE 54 (176)
Q Consensus 42 d~r~~F~CPFC~e 54 (176)
.+...|.|||||.
T Consensus 31 ~q~~ky~CpfCGk 43 (83)
T 3j21_i 31 KMRQKHTCPVCGR 43 (83)
T ss_dssp HHHSCBCCSSSCS
T ss_pred HhhcccCCCCCCC
Confidence 4567899999998
No 267
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=63.36 E-value=6 Score=27.18 Aligned_cols=26 Identities=23% Similarity=0.533 Sum_probs=21.4
Q ss_pred cccCCCCCCCC-CHHHHHhhhhhhccC
Q 030491 46 DFPCPYCYEDF-DIASLCSHLEDEHSC 71 (176)
Q Consensus 46 ~F~CPFC~e~f-Dv~~L~~H~~eeH~~ 71 (176)
.|.|+.|++.| ....|..|+...|..
T Consensus 62 ~~~C~~Cgk~F~~~~~L~~H~~~~H~~ 88 (96)
T 2ctd_A 62 MFTCHHCGKQLRSLAGMKYHVMANHNS 88 (96)
T ss_dssp CCCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred CeECCCCCCeeCCHHHHHHHhHHhcCC
Confidence 69999999966 568899997778864
No 268
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=62.98 E-value=1.1 Score=35.70 Aligned_cols=27 Identities=19% Similarity=0.511 Sum_probs=18.3
Q ss_pred CcccCCCCCCCCCHHHHHhhhhhhccCCCcceecCccccc
Q 030491 45 PDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVK 84 (176)
Q Consensus 45 ~~F~CPFC~e~fDv~~L~~H~~eeH~~e~k~vVCPICaa~ 84 (176)
..|.|+.||--++-. .-+-+||+|.+.
T Consensus 154 ~~~~C~~CG~~~~g~-------------~~p~~CP~C~~~ 180 (191)
T 1lko_A 154 TKWRCRNCGYVHEGT-------------GAPELCPACAHP 180 (191)
T ss_dssp EEEEETTTCCEEEEE-------------ECCSBCTTTCCB
T ss_pred ceEEECCCCCEeeCC-------------CCCCCCCCCcCC
Confidence 379999999844410 122399999873
No 269
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=62.77 E-value=1.4 Score=28.41 Aligned_cols=43 Identities=26% Similarity=0.590 Sum_probs=25.3
Q ss_pred CCCCcccCCCCCCCCCHHHH-Hhh-----hhhhccCCCcceecCcccccch
Q 030491 42 DVRPDFPCPYCYEDFDIASL-CSH-----LEDEHSCESKVTVCPICSVKVA 86 (176)
Q Consensus 42 d~r~~F~CPFC~e~fDv~~L-~~H-----~~eeH~~e~k~vVCPICaa~~s 86 (176)
+....+.||.|.+.+....| |.| |..... .+...||+|...+.
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~CgH~fc~~Ci~~~~--~~~~~CP~Cr~~~~ 59 (70)
T 2ecn_A 11 QLTDEEECCICMDGRADLILPCAHSFCQKCIDKWS--DRHRNCPICRLQMT 59 (70)
T ss_dssp CCCCCCCCSSSCCSCCSEEETTTEEECHHHHHHSS--CCCSSCHHHHHCTT
T ss_pred cCCCCCCCeeCCcCccCcccCCCCcccHHHHHHHH--HCcCcCCCcCCccc
Confidence 34557899999885443221 333 333322 24678999977653
No 270
>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}
Probab=62.65 E-value=4.1 Score=24.04 Aligned_cols=19 Identities=32% Similarity=0.683 Sum_probs=13.7
Q ss_pred ceecCcccc-cchhhHHHHh
Q 030491 75 VTVCPICSV-KVARDMLSHI 93 (176)
Q Consensus 75 ~vVCPICaa-~~s~d~l~HL 93 (176)
.|-||||-. ||...+-.||
T Consensus 6 ~vqcpvcqq~mpaahin~hl 25 (29)
T 3vhs_A 6 QVQCPVCQQMMPAAHINSHL 25 (29)
T ss_dssp EEECTTTCCEEEGGGHHHHH
T ss_pred eeeChHHHHhCcHHHHHHHH
Confidence 578999965 5666666665
No 271
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=62.48 E-value=6.1 Score=24.82 Aligned_cols=23 Identities=22% Similarity=0.264 Sum_probs=18.8
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhh
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDE 68 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~ee 68 (176)
.|.|+.|++ --....|..|....
T Consensus 45 ~~~C~~C~k~f~~~~~L~~H~~~H 68 (74)
T 2lce_A 45 PYRCNICGAQFNRPANLKTHTRIH 68 (74)
T ss_dssp SEECTTTCCEESCHHHHHHHHHHH
T ss_pred CEECCCCCchhCCHHHHHHHHHhc
Confidence 599999999 45678899998653
No 272
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=62.27 E-value=0.76 Score=28.77 Aligned_cols=40 Identities=23% Similarity=0.628 Sum_probs=23.1
Q ss_pred cccCCCCCCCCCHHH---------HHhh-----hhhhccCCCcceecCcccccchh
Q 030491 46 DFPCPYCYEDFDIAS---------LCSH-----LEDEHSCESKVTVCPICSVKVAR 87 (176)
Q Consensus 46 ~F~CPFC~e~fDv~~---------L~~H-----~~eeH~~e~k~vVCPICaa~~s~ 87 (176)
.+.||.|.+.+.... -|.| |....-. +...||+|...+..
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~--~~~~CP~Cr~~~~~ 56 (64)
T 2xeu_A 3 MVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLK--NANTCPTCRKKINH 56 (64)
T ss_dssp CCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHH--HCSBCTTTCCBCTT
T ss_pred CCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHH--cCCCCCCCCccCCc
Confidence 578999988765531 1333 2222211 24589999887643
No 273
>3iz5_m 60S ribosomal protein L43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_m 1ysh_D 2zkr_z
Probab=62.12 E-value=2.6 Score=31.08 Aligned_cols=13 Identities=15% Similarity=0.682 Sum_probs=11.0
Q ss_pred CCCCcccCCCCCC
Q 030491 42 DVRPDFPCPYCYE 54 (176)
Q Consensus 42 d~r~~F~CPFC~e 54 (176)
.+...|.|||||.
T Consensus 32 ~q~~ky~CpfCgk 44 (92)
T 3iz5_m 32 SQHSKYFCEFCGK 44 (92)
T ss_dssp HHHSCBCCTTTCS
T ss_pred HHhccccCcccCC
Confidence 4567899999998
No 274
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=61.77 E-value=2.5 Score=30.28 Aligned_cols=30 Identities=30% Similarity=0.625 Sum_probs=21.0
Q ss_pred CCCcccCCCCCCC--CCHHHHHhhhhhhccCCCcceecCcccccc
Q 030491 43 VRPDFPCPYCYED--FDIASLCSHLEDEHSCESKVTVCPICSVKV 85 (176)
Q Consensus 43 ~r~~F~CPFC~e~--fDv~~L~~H~~eeH~~e~k~vVCPICaa~~ 85 (176)
+...|+|||||.+ ++. ......||-|-...
T Consensus 24 q~~~y~Cp~CG~~~v~r~-------------atGiW~C~~Cg~~~ 55 (83)
T 1vq8_Z 24 MNEDHACPNCGEDRVDRQ-------------GTGIWQCSYCDYKF 55 (83)
T ss_dssp HHSCEECSSSCCEEEEEE-------------ETTEEEETTTCCEE
T ss_pred ccccCcCCCCCCcceecc-------------CCCeEECCCCCCEe
Confidence 3468999999982 222 23467899998764
No 275
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=61.75 E-value=5.7 Score=26.30 Aligned_cols=22 Identities=27% Similarity=0.542 Sum_probs=19.3
Q ss_pred CcccCCCCCCCCC-HHHHHhhhh
Q 030491 45 PDFPCPYCYEDFD-IASLCSHLE 66 (176)
Q Consensus 45 ~~F~CPFC~e~fD-v~~L~~H~~ 66 (176)
..|.||=|+..|. ...|..|..
T Consensus 11 ~~~~CPrCn~~f~~~~sLr~Hmk 33 (49)
T 2e72_A 11 GRKICPRCNAQFRVTEALRGHMC 33 (49)
T ss_dssp SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred CceeCCcccccccchHHHHhhhh
Confidence 4899999999887 788999987
No 276
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=61.30 E-value=6 Score=25.75 Aligned_cols=31 Identities=26% Similarity=0.326 Sum_probs=22.7
Q ss_pred ccCCCCCCCC-CHHHHHhhhhhhccCCCcceecC
Q 030491 47 FPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCP 79 (176)
Q Consensus 47 F~CPFC~e~f-Dv~~L~~H~~eeH~~e~k~vVCP 79 (176)
|.|+.|++.| ....|..|+.. |..+ ++-.|+
T Consensus 63 ~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~ 94 (95)
T 2ej4_A 63 EECPREGKSFKAKYKLVNHIRV-HTGE-KSGPSS 94 (95)
T ss_dssp TTCSSTTCCCSSHHHHHHHHHH-HHTC-CCCSSC
T ss_pred cCCCCCCcccCCHHHHHHHHHh-cCCC-CCCCCC
Confidence 9999999955 67889999875 5443 445564
No 277
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=61.06 E-value=0.42 Score=33.27 Aligned_cols=41 Identities=37% Similarity=0.719 Sum_probs=25.8
Q ss_pred CCcccCCCCCCCCCHH-HH--Hhh-----hhhhccCCCcceecCcccccch
Q 030491 44 RPDFPCPYCYEDFDIA-SL--CSH-----LEDEHSCESKVTVCPICSVKVA 86 (176)
Q Consensus 44 r~~F~CPFC~e~fDv~-~L--~~H-----~~eeH~~e~k~vVCPICaa~~s 86 (176)
...+.||.|.+.|... .+ |.| |....-. ....||+|...+.
T Consensus 20 ~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~--~~~~CP~Cr~~~~ 68 (99)
T 2y43_A 20 DDLLRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLS--YKTQCPTCCVTVT 68 (99)
T ss_dssp HHHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHT--TCCBCTTTCCBCC
T ss_pred CCCCCcccCChhhCCcCEECCCCCHhhHHHHHHHHH--CCCCCCCCCCcCC
Confidence 4478999998855433 22 444 4444332 2468999988764
No 278
>3izc_m 60S ribosomal protein RPL43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_m 3o58_g 3o5h_g 3u5e_p 3u5i_p 4b6a_p 1s1i_9
Probab=60.80 E-value=2.7 Score=31.05 Aligned_cols=13 Identities=15% Similarity=0.772 Sum_probs=11.0
Q ss_pred CCCCcccCCCCCC
Q 030491 42 DVRPDFPCPYCYE 54 (176)
Q Consensus 42 d~r~~F~CPFC~e 54 (176)
.+...|.|||||.
T Consensus 32 ~q~~ky~CpfCgk 44 (92)
T 3izc_m 32 QQHARYDCSFCGK 44 (92)
T ss_dssp HHHSCCCCSSSCS
T ss_pred HHhcCCcCCCCCC
Confidence 4567899999998
No 279
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.62 E-value=2.9 Score=23.63 Aligned_cols=22 Identities=23% Similarity=0.318 Sum_probs=15.5
Q ss_pred cccCCCCCC-CCCHHHHHhhhhh
Q 030491 46 DFPCPYCYE-DFDIASLCSHLED 67 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~e 67 (176)
.|.|+.|++ --....|..|...
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~ 34 (44)
T 2eox_A 12 SYNCNECGKAFTRIFHLTRHQKI 34 (44)
T ss_dssp CEEETTTTEEESSSHHHHTTHHH
T ss_pred CeECcccCcccCCHHHHHHHHHH
Confidence 588888888 4455677777654
No 280
>4a17_Y RPL37A, 60S ribosomal protein L32; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_Y 4a1c_Y 4a1e_Y
Probab=60.25 E-value=2.8 Score=31.56 Aligned_cols=32 Identities=16% Similarity=0.518 Sum_probs=20.2
Q ss_pred CCCCcccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcccccc
Q 030491 42 DVRPDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV 85 (176)
Q Consensus 42 d~r~~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~ 85 (176)
.+...|.|||||. .+.. ....--.|.-|-..+
T Consensus 32 ~q~aky~CpfCgk~~vKR------------~a~GIW~C~kCg~~~ 64 (103)
T 4a17_Y 32 TQHAKYGCPFCGKVAVKR------------AAVGIWKCKPCKKII 64 (103)
T ss_dssp HHHSCEECTTTCCEEEEE------------EETTEEEETTTTEEE
T ss_pred HhhcCCCCCCCCCceeee------------cCcceEEcCCCCCEE
Confidence 4567899999998 5321 111122488887775
No 281
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=59.85 E-value=7.5 Score=19.97 Aligned_cols=22 Identities=32% Similarity=0.640 Sum_probs=16.3
Q ss_pred cccCC--CCCCCC-CHHHHHhhhhh
Q 030491 46 DFPCP--YCYEDF-DIASLCSHLED 67 (176)
Q Consensus 46 ~F~CP--FC~e~f-Dv~~L~~H~~e 67 (176)
.|.|+ .|++.| ....|..|...
T Consensus 2 p~~C~~~~C~k~f~~~~~L~~H~~~ 26 (31)
T 1sp2_A 2 PFMCTWSYCGKRFTRSDELQRHKRT 26 (31)
T ss_dssp CCBCCSTTCCCBCSSHHHHHHHHTT
T ss_pred CcCCcCCCCCcccCCHhHHHHHHHH
Confidence 37887 899954 56788888754
No 282
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=59.83 E-value=0.78 Score=32.42 Aligned_cols=41 Identities=29% Similarity=0.551 Sum_probs=24.9
Q ss_pred CCcccCCCCCCCCCH-HHH--Hhh-----hhhhccCCCcceecCcccccch
Q 030491 44 RPDFPCPYCYEDFDI-ASL--CSH-----LEDEHSCESKVTVCPICSVKVA 86 (176)
Q Consensus 44 r~~F~CPFC~e~fDv-~~L--~~H-----~~eeH~~e~k~vVCPICaa~~s 86 (176)
...+.||.|.+.|.. ..| |.| |...+-.. ...||+|...+.
T Consensus 13 ~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~--~~~CP~Cr~~~~ 61 (108)
T 2ckl_A 13 NPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET--SKYCPICDVQVH 61 (108)
T ss_dssp GGGTBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHTS--CSBCTTTCCBSC
T ss_pred CCcCCCccCChHHhCcCEeCCCCChhhHHHHHHHHHh--CCcCcCCCcccc
Confidence 347899999884433 222 333 44444322 378999988754
No 283
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=59.29 E-value=7.3 Score=26.98 Aligned_cols=26 Identities=27% Similarity=0.579 Sum_probs=21.2
Q ss_pred cccCCCCCCCC-CHHHHHhhhhhhccC
Q 030491 46 DFPCPYCYEDF-DIASLCSHLEDEHSC 71 (176)
Q Consensus 46 ~F~CPFC~e~f-Dv~~L~~H~~eeH~~ 71 (176)
.|.|++|++.| ....|..|....|..
T Consensus 100 ~~~C~~C~k~f~~~~~l~~H~~~h~~~ 126 (129)
T 2wbt_A 100 TKVCPVCKKEFTSTDSALDHVCKKHNI 126 (129)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred CCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence 59999999955 667899999887753
No 284
>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}
Probab=59.22 E-value=2.7 Score=26.32 Aligned_cols=22 Identities=18% Similarity=0.475 Sum_probs=17.6
Q ss_pred CcccCCCCCCCCCHHHHHhhhh
Q 030491 45 PDFPCPYCYEDFDIASLCSHLE 66 (176)
Q Consensus 45 ~~F~CPFC~e~fDv~~L~~H~~ 66 (176)
..|.||-|++.|.+....+|.+
T Consensus 8 ~~~~C~~C~~~i~~~~~~EH~D 29 (39)
T 2i5o_A 8 DQVPCEKCGSLVPVWDMPEHMD 29 (39)
T ss_dssp CEEECTTTCCEEEGGGHHHHHH
T ss_pred CCcccccccCcCCcccccchhh
Confidence 3789999999888777788764
No 285
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=58.26 E-value=6.3 Score=25.99 Aligned_cols=11 Identities=45% Similarity=1.102 Sum_probs=6.3
Q ss_pred CCcccCCCCCC
Q 030491 44 RPDFPCPYCYE 54 (176)
Q Consensus 44 r~~F~CPFC~e 54 (176)
-++..|||||.
T Consensus 21 lP~IrCpyCGy 31 (48)
T 4ayb_P 21 LPGVRCPYCGY 31 (48)
T ss_dssp CSSSCCTTTCC
T ss_pred CCCcccCccCc
Confidence 45566666654
No 286
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=58.06 E-value=3.4 Score=33.34 Aligned_cols=26 Identities=27% Similarity=0.525 Sum_probs=19.1
Q ss_pred CcccCCCCCCCCCHHHHHhhhhhhccCCCcceecCccccc
Q 030491 45 PDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVK 84 (176)
Q Consensus 45 ~~F~CPFC~e~fDv~~L~~H~~eeH~~e~k~vVCPICaa~ 84 (176)
..|.|+.||--++ + ..+-+||||.+.
T Consensus 170 ~~~~C~~CG~i~~--g------------~~p~~CP~C~~~ 195 (202)
T 1yuz_A 170 KFHLCPICGYIHK--G------------EDFEKCPICFRP 195 (202)
T ss_dssp CEEECSSSCCEEE--S------------SCCSBCTTTCCB
T ss_pred cEEEECCCCCEEc--C------------cCCCCCCCCCCC
Confidence 5899999998444 1 123799999764
No 287
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=57.95 E-value=0.82 Score=34.69 Aligned_cols=43 Identities=23% Similarity=0.529 Sum_probs=26.1
Q ss_pred CCCCcccCCCCCCCCCHH-HH--Hhh-----hhhhccCCCcceecCcccccc
Q 030491 42 DVRPDFPCPYCYEDFDIA-SL--CSH-----LEDEHSCESKVTVCPICSVKV 85 (176)
Q Consensus 42 d~r~~F~CPFC~e~fDv~-~L--~~H-----~~eeH~~e~k~vVCPICaa~~ 85 (176)
+....+.||.|.+.|... .+ |.| |....-. .....||+|...+
T Consensus 50 ~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~-~~~~~CP~Cr~~~ 100 (165)
T 2ckl_B 50 SLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALR-SGNKECPTCRKKL 100 (165)
T ss_dssp CCHHHHBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHH-TTCCBCTTTCCBC
T ss_pred hCCCCCCCcccChHhhCcCEeCCCCChhHHHHHHHHHH-hCcCCCCCCCCcC
Confidence 345689999998855433 22 333 3333322 2357899998875
No 288
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=57.68 E-value=9.3 Score=19.67 Aligned_cols=22 Identities=23% Similarity=0.502 Sum_probs=16.2
Q ss_pred cccCC--CCCCCC-CHHHHHhhhhh
Q 030491 46 DFPCP--YCYEDF-DIASLCSHLED 67 (176)
Q Consensus 46 ~F~CP--FC~e~f-Dv~~L~~H~~e 67 (176)
.|.|+ .|++.| ....|..|...
T Consensus 3 ~~~C~~~~C~k~f~~~~~L~~H~~~ 27 (32)
T 1zfd_A 3 PYSCDHPGCDKAFVRNHDLIRHKKS 27 (32)
T ss_dssp SBCCCCTTCCCCBSSSHHHHHHHGG
T ss_pred CCcCcCCCCCCccCCHHHHHHHHHH
Confidence 48898 799954 56778888754
No 289
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=57.30 E-value=1.8 Score=23.20 Aligned_cols=21 Identities=33% Similarity=0.790 Sum_probs=13.6
Q ss_pred cccCCCCCCCCCH-HHHHhhhh
Q 030491 46 DFPCPYCYEDFDI-ASLCSHLE 66 (176)
Q Consensus 46 ~F~CPFC~e~fDv-~~L~~H~~ 66 (176)
.|.|+.|++.|.. ..|..|..
T Consensus 2 p~~C~~C~k~f~~~~~L~~H~~ 23 (32)
T 2kfq_A 2 AFACPACPKRFMRSDALSKHIK 23 (32)
T ss_dssp CSSSSSSCTTHHHHHTTSSSTT
T ss_pred CCCCCCCCcccCCHHHHHHHHH
Confidence 3788888886654 34556654
No 290
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=56.45 E-value=0.52 Score=29.04 Aligned_cols=38 Identities=26% Similarity=0.692 Sum_probs=19.9
Q ss_pred cccCCCCCCCCCH----HHH--Hhh-----hhhhccCCCcceecCcccccc
Q 030491 46 DFPCPYCYEDFDI----ASL--CSH-----LEDEHSCESKVTVCPICSVKV 85 (176)
Q Consensus 46 ~F~CPFC~e~fDv----~~L--~~H-----~~eeH~~e~k~vVCPICaa~~ 85 (176)
...||.|.+++.. ..| |.| |....- .+...||+|...+
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~--~~~~~CP~Cr~~~ 53 (55)
T 1iym_A 5 GVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWL--GSHSTCPLCRLTV 53 (55)
T ss_dssp SCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTT--TTCCSCSSSCCCS
T ss_pred CCcCccCCccccCCCceEECCCCCCcccHHHHHHHH--HcCCcCcCCCCEe
Confidence 4567888775543 222 333 222221 2345799997643
No 291
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=55.87 E-value=3.5 Score=31.57 Aligned_cols=32 Identities=28% Similarity=0.667 Sum_probs=22.2
Q ss_pred CCCCcccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcccccc
Q 030491 42 DVRPDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV 85 (176)
Q Consensus 42 d~r~~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~ 85 (176)
.+...|.|||||+ .+-..+ ..--.|+-|-..+
T Consensus 56 ~q~akytCPfCGk~~vKR~a------------vGIW~C~~Cgk~f 88 (116)
T 3cc2_Z 56 EMNEDHACPNCGEDRVDRQG------------TGIWQCSYCDYKF 88 (116)
T ss_dssp HHHSCEECSSSCCEEEEEEE------------TTEEEETTTCCEE
T ss_pred HhccCCcCCCCCCceeEecC------------ceeEECCCCCCEE
Confidence 4577899999998 543222 2355699998775
No 292
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=55.16 E-value=0.74 Score=31.86 Aligned_cols=41 Identities=22% Similarity=0.600 Sum_probs=23.5
Q ss_pred CCcccCCCCCCCCCHHH-----HHhh-----hhhhccCCCcceecCcccccch
Q 030491 44 RPDFPCPYCYEDFDIAS-----LCSH-----LEDEHSCESKVTVCPICSVKVA 86 (176)
Q Consensus 44 r~~F~CPFC~e~fDv~~-----L~~H-----~~eeH~~e~k~vVCPICaa~~s 86 (176)
.....||.|.++|.... -|.| |....- .++..||+|...+.
T Consensus 38 ~~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl--~~~~~CP~Cr~~~~ 88 (91)
T 2l0b_A 38 GQEMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWL--QKSGTCPVCRCMFP 88 (91)
T ss_dssp SSCSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHH--TTTCBCTTTCCBSS
T ss_pred CCCCCCcccChhhcCCCcEEecCCCChHHHHHHHHHH--HcCCcCcCcCccCC
Confidence 34788999987554311 1444 232222 13458999987653
No 293
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=54.41 E-value=1.6 Score=33.20 Aligned_cols=43 Identities=21% Similarity=0.453 Sum_probs=25.4
Q ss_pred CCcccCCCCCCCCCHHH-------HHhhhhhhccCCCcceecCcccccchh
Q 030491 44 RPDFPCPYCYEDFDIAS-------LCSHLEDEHSCESKVTVCPICSVKVAR 87 (176)
Q Consensus 44 r~~F~CPFC~e~fDv~~-------L~~H~~eeH~~e~k~vVCPICaa~~s~ 87 (176)
...|.||.|.+.|.... .|..|...+-. .....||+|...+..
T Consensus 76 ~~~~~C~IC~~~~~~pv~~~CgH~fC~~Ci~~~~~-~~~~~CP~Cr~~~~~ 125 (150)
T 1z6u_A 76 EQSFMCVCCQELVYQPVTTECFHNVCKDCLQRSFK-AQVFSCPACRHDLGQ 125 (150)
T ss_dssp HHHTBCTTTSSBCSSEEECTTSCEEEHHHHHHHHH-TTCCBCTTTCCBCCT
T ss_pred ccCCEeecCChhhcCCEEcCCCCchhHHHHHHHHH-hCCCcCCCCCccCCC
Confidence 45799999988544321 22234444332 234589999887643
No 294
>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*
Probab=53.52 E-value=8.2 Score=31.71 Aligned_cols=25 Identities=36% Similarity=0.697 Sum_probs=21.6
Q ss_pred CCcccCCCCCCCC--CHHHHHhhhhhh
Q 030491 44 RPDFPCPYCYEDF--DIASLCSHLEDE 68 (176)
Q Consensus 44 r~~F~CPFC~e~f--Dv~~L~~H~~ee 68 (176)
...+.|..|+.+| ....|-.|++++
T Consensus 167 ~~~L~C~~C~~~f~n~~~~LK~HL~~e 193 (204)
T 3sp4_A 167 QEDLKCWRCGETFGRHFTKLKAHLQEE 193 (204)
T ss_dssp GSCCBCTTTCCBCTTCHHHHHHHHHHH
T ss_pred CCCceeCCCCchhhcccHHHHHHHHHH
Confidence 4578999999977 499999999986
No 295
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=53.32 E-value=1.4 Score=31.03 Aligned_cols=42 Identities=29% Similarity=0.521 Sum_probs=24.1
Q ss_pred CCcccCCCCCCCCCHHHH---Hhh-----hhhhccCCCcceecCcccccch
Q 030491 44 RPDFPCPYCYEDFDIASL---CSH-----LEDEHSCESKVTVCPICSVKVA 86 (176)
Q Consensus 44 r~~F~CPFC~e~fDv~~L---~~H-----~~eeH~~e~k~vVCPICaa~~s 86 (176)
...+.||.|.+.|..... |.| |....-... ...||+|...+.
T Consensus 20 ~~~~~C~IC~~~~~~p~~~~~CgH~FC~~Ci~~~~~~~-~~~CP~Cr~~~~ 69 (100)
T 3lrq_A 20 AEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQ-RAQCPHCRAPLQ 69 (100)
T ss_dssp HHHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHHHT-CSBCTTTCCBCC
T ss_pred CCCCCCccCCccccCccccCCCCChhhHHHHHHHHHHC-cCCCCCCCCcCC
Confidence 347899999885543222 222 333322111 268999988764
No 296
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=53.01 E-value=5.1 Score=26.19 Aligned_cols=13 Identities=38% Similarity=0.974 Sum_probs=11.4
Q ss_pred CCCCcccCCCCCC
Q 030491 42 DVRPDFPCPYCYE 54 (176)
Q Consensus 42 d~r~~F~CPFC~e 54 (176)
+++..|.||.|+.
T Consensus 31 ~lP~dw~CP~Cg~ 43 (52)
T 1yk4_A 31 DLPDDWVCPLCGA 43 (52)
T ss_dssp GSCTTCBCTTTCC
T ss_pred HCCCCCcCCCCCC
Confidence 5778999999987
No 297
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=52.45 E-value=2.9 Score=30.74 Aligned_cols=30 Identities=27% Similarity=0.531 Sum_probs=22.0
Q ss_pred CCCCcccCCCCCCCCCHHHHHhhhhhhccCCCcce-ecCccccc
Q 030491 42 DVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVT-VCPICSVK 84 (176)
Q Consensus 42 d~r~~F~CPFC~e~fDv~~L~~H~~eeH~~e~k~v-VCPICaa~ 84 (176)
+.+..|.|+-||..|... .... .||.|...
T Consensus 69 ~~p~~~~C~~CG~~~e~~-------------~~~~~~CP~Cgs~ 99 (119)
T 2kdx_A 69 DEKVELECKDCSHVFKPN-------------ALDYGVCEKCHSK 99 (119)
T ss_dssp EECCEEECSSSSCEECSC-------------CSTTCCCSSSSSC
T ss_pred eccceEEcCCCCCEEeCC-------------CCCCCcCccccCC
Confidence 346689999999966651 2356 89999765
No 298
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=52.32 E-value=4.5 Score=27.85 Aligned_cols=31 Identities=6% Similarity=0.110 Sum_probs=21.1
Q ss_pred CCCCcccCCCCCCCCCHHHHHhhhhhhccCCCcceecCcccc
Q 030491 42 DVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSV 83 (176)
Q Consensus 42 d~r~~F~CPFC~e~fDv~~L~~H~~eeH~~e~k~vVCPICaa 83 (176)
.+.....||.|.-.+.... +....+||-|..
T Consensus 4 ~LL~iL~CP~ck~~L~~~~-----------~~~~LiC~~cg~ 34 (68)
T 2jr6_A 4 KFLDILVCPVTKGRLEYHQ-----------DKQELWSRQAKL 34 (68)
T ss_dssp SSSCCCBCSSSCCBCEEET-----------TTTEEEETTTTE
T ss_pred HHhhheECCCCCCcCeEeC-----------CCCEEEcCCCCc
Confidence 4567899999987544321 236789999854
No 299
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=52.30 E-value=5.2 Score=26.46 Aligned_cols=13 Identities=38% Similarity=0.912 Sum_probs=11.2
Q ss_pred CCCCcccCCCCCC
Q 030491 42 DVRPDFPCPYCYE 54 (176)
Q Consensus 42 d~r~~F~CPFC~e 54 (176)
|++..|.||.|+.
T Consensus 32 ~lP~dw~CP~Cga 44 (55)
T 2v3b_B 32 DIPADWVCPDCGV 44 (55)
T ss_dssp GSCTTCCCTTTCC
T ss_pred HCCCCCcCCCCCC
Confidence 5678899999987
No 300
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=52.19 E-value=4.9 Score=29.21 Aligned_cols=10 Identities=20% Similarity=0.471 Sum_probs=6.6
Q ss_pred CcccCCCCCC
Q 030491 45 PDFPCPYCYE 54 (176)
Q Consensus 45 ~~F~CPFC~e 54 (176)
..|.|+.||-
T Consensus 34 ~~y~C~vCGy 43 (87)
T 1s24_A 34 LKWICITCGH 43 (87)
T ss_dssp CEEEETTTTE
T ss_pred ceEECCCCCe
Confidence 4677777753
No 301
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=51.75 E-value=3.9 Score=27.12 Aligned_cols=37 Identities=22% Similarity=0.481 Sum_probs=23.4
Q ss_pred CCcccCCCCCC-CCCHHH-------HHhhhhhhccCCCcceecCcccccch
Q 030491 44 RPDFPCPYCYE-DFDIAS-------LCSHLEDEHSCESKVTVCPICSVKVA 86 (176)
Q Consensus 44 r~~F~CPFC~e-~fDv~~-------L~~H~~eeH~~e~k~vVCPICaa~~s 86 (176)
.....|+.|.+ .-++.- +|..|.. +...||+|...+.
T Consensus 13 ~~~~~C~IC~~~~~~~v~~pCgH~~~C~~C~~------~~~~CP~CR~~i~ 57 (68)
T 2ea5_A 13 ENSKDCVVCQNGTVNWVLLPCRHTCLCDGCVK------YFQQCPMCRQFVQ 57 (68)
T ss_dssp CCSSCCSSSSSSCCCCEETTTTBCCSCTTHHH------HCSSCTTTCCCCC
T ss_pred CCCCCCCCcCcCCCCEEEECCCChhhhHHHHh------cCCCCCCCCcchh
Confidence 34678999988 444433 3334443 2368999988764
No 302
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=51.70 E-value=2.8 Score=29.99 Aligned_cols=37 Identities=24% Similarity=0.564 Sum_probs=22.4
Q ss_pred CcccCCCCCCCC-CHHHH--Hhh-----hhhhccCCCcceecCcccccc
Q 030491 45 PDFPCPYCYEDF-DIASL--CSH-----LEDEHSCESKVTVCPICSVKV 85 (176)
Q Consensus 45 ~~F~CPFC~e~f-Dv~~L--~~H-----~~eeH~~e~k~vVCPICaa~~ 85 (176)
..+.||.|.+.| +-..| |.| |...+-. ..||+|...+
T Consensus 21 ~~~~C~IC~~~~~~pv~~~~CgH~fC~~Ci~~~~~----~~CP~Cr~~~ 65 (117)
T 1jm7_B 21 KLLRCSRCTNILREPVCLGGCEHIFCSNCVSDCIG----TGCPVCYTPA 65 (117)
T ss_dssp HTTSCSSSCSCCSSCBCCCSSSCCBCTTTGGGGTT----TBCSSSCCBC
T ss_pred hCCCCCCCChHhhCccEeCCCCCHHHHHHHHHHhc----CCCcCCCCcC
Confidence 478999998844 33333 444 3333221 6799998775
No 303
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=51.58 E-value=2 Score=29.97 Aligned_cols=43 Identities=21% Similarity=0.509 Sum_probs=22.9
Q ss_pred CcccCCCCCCCCCHHH--HHhh-----hhhhccCC-CcceecCcccccchh
Q 030491 45 PDFPCPYCYEDFDIAS--LCSH-----LEDEHSCE-SKVTVCPICSVKVAR 87 (176)
Q Consensus 45 ~~F~CPFC~e~fDv~~--L~~H-----~~eeH~~e-~k~vVCPICaa~~s~ 87 (176)
..+.||.|.+.+.... -|.| |...+-.. .....||+|...+..
T Consensus 20 ~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 70 (112)
T 1jm7_A 20 KILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITK 70 (112)
T ss_dssp HHTSCSSSCCCCSSCCBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCT
T ss_pred CCCCCcccChhhcCeEECCCCCHHHHHHHHHHHHhCCCCCCCcCCCCcCCH
Confidence 3678888877443211 1222 33333221 234689999887643
No 304
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=51.33 E-value=10 Score=20.63 Aligned_cols=22 Identities=23% Similarity=0.421 Sum_probs=17.2
Q ss_pred cccCCC--CCCCC-CHHHHHhhhhh
Q 030491 46 DFPCPY--CYEDF-DIASLCSHLED 67 (176)
Q Consensus 46 ~F~CPF--C~e~f-Dv~~L~~H~~e 67 (176)
.|.|++ |++.| ....|..|...
T Consensus 8 ~~~C~~~~C~k~f~~~~~L~~H~~~ 32 (37)
T 1va1_A 8 QHICHIQGCGKVYGKTSHLRAHLRW 32 (37)
T ss_dssp CEECCSTTCCCEESCHHHHHHHHHH
T ss_pred CCCCCCCCCCCccCCHHHHHHHHHh
Confidence 699996 99954 67778888764
No 305
>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5
Probab=51.33 E-value=8.8 Score=29.17 Aligned_cols=33 Identities=24% Similarity=0.377 Sum_probs=27.1
Q ss_pred CCCcceecCcccccc--hhhHHHHhhhhccchhhh
Q 030491 71 CESKVTVCPICSVKV--ARDMLSHITLQHGHLFKL 103 (176)
Q Consensus 71 ~e~k~vVCPICaa~~--s~d~l~HL~~rH~~~~k~ 103 (176)
.+...++|-.|...- ...+++|+...|+|.+..
T Consensus 11 ~e~~~~~CLFCd~~~~s~~~~l~H~k~~H~FD~~~ 45 (121)
T 1wir_A 11 HGRQHTPCLFCDRLFASAEETFSHCKLEHQFNIDS 45 (121)
T ss_dssp CCCCCEECSSSCCEESSHHHHHHHHHHSSCCCHHH
T ss_pred CCCCceeEecCCCcccCHHHHHHHHHHhcCCCHHH
Confidence 345679999998864 578999999999997754
No 306
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=50.87 E-value=6.4 Score=28.24 Aligned_cols=14 Identities=43% Similarity=1.032 Sum_probs=11.1
Q ss_pred CCCCCcccCCCCCC
Q 030491 41 DDVRPDFPCPYCYE 54 (176)
Q Consensus 41 dd~r~~F~CPFC~e 54 (176)
+|++..|.||.|+.
T Consensus 55 edlPddW~CPvCga 68 (81)
T 2kn9_A 55 DDIPDDWSCPDCGA 68 (81)
T ss_dssp TTSCTTCCCTTTCC
T ss_pred hHCCCCCcCCCCCC
Confidence 35677899999987
No 307
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=50.28 E-value=6 Score=26.25 Aligned_cols=13 Identities=38% Similarity=0.958 Sum_probs=11.3
Q ss_pred CCCCcccCCCCCC
Q 030491 42 DVRPDFPCPYCYE 54 (176)
Q Consensus 42 d~r~~F~CPFC~e 54 (176)
++...+.||.|+.
T Consensus 32 ~lP~dw~CP~Cg~ 44 (54)
T 4rxn_A 32 DIPDDWVCPLCGV 44 (54)
T ss_dssp GSCTTCBCTTTCC
T ss_pred HCCCCCcCcCCCC
Confidence 5677899999987
No 308
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.87 E-value=14 Score=21.76 Aligned_cols=22 Identities=32% Similarity=0.430 Sum_probs=17.7
Q ss_pred cccCCC--CCC-CCCHHHHHhhhhh
Q 030491 46 DFPCPY--CYE-DFDIASLCSHLED 67 (176)
Q Consensus 46 ~F~CPF--C~e-~fDv~~L~~H~~e 67 (176)
-|.|++ |++ =.....|..|+..
T Consensus 9 p~~C~~~~C~k~F~~~~~L~~H~r~ 33 (38)
T 2eln_A 9 LLKCPTDGCDYSTPDKYKLQAHLKV 33 (38)
T ss_dssp CEECSSSSCCCEESCHHHHHHHHHH
T ss_pred CCCCCCCCCCCccCCHHHHHHHHHh
Confidence 599987 999 5577888899764
No 309
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=49.79 E-value=6.9 Score=34.28 Aligned_cols=30 Identities=20% Similarity=0.424 Sum_probs=19.3
Q ss_pred cccCCCCCCCCCHHHHHhhhhhhccCCCcceecCccc-ccchhh
Q 030491 46 DFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICS-VKVARD 88 (176)
Q Consensus 46 ~F~CPFC~e~fDv~~L~~H~~eeH~~e~k~vVCPICa-a~~s~d 88 (176)
.-.|||||..+. .+-+.-+||||- +.+|.+
T Consensus 278 ~v~Cp~cgA~y~-------------~~~kG~lC~vC~l~~IG~~ 308 (320)
T 3mkr_B 278 VEKCPLSGACYS-------------PEFKGQICKVTTVTEIGKD 308 (320)
T ss_dssp CEECTTTCCEEC-------------GGGTTSBCTTTSSBBSSCC
T ss_pred CccCCCCCCeec-------------hhhCCCCCCCCcCcccCCc
Confidence 348999997432 123456999994 456554
No 310
>3flo_B DNA polymerase alpha catalytic subunit A; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=49.67 E-value=1.8 Score=35.54 Aligned_cols=39 Identities=18% Similarity=0.427 Sum_probs=24.6
Q ss_pred CCcccCCCCCCCCCHHHHHhhhhhhcc-CCCcceecCcccccc
Q 030491 44 RPDFPCPYCYEDFDIASLCSHLEDEHS-CESKVTVCPICSVKV 85 (176)
Q Consensus 44 r~~F~CPFC~e~fDv~~L~~H~~eeH~-~e~k~vVCPICaa~~ 85 (176)
+-+|.||.|+..+...++.. .... ....-..||-|...+
T Consensus 20 ~l~l~Cp~C~~~~~F~gv~~---~~~~~~~~sg~~C~~C~~~~ 59 (206)
T 3flo_B 20 TLELSCPSCDKRFPFGGIVS---SNYYRVSYNGLQCKHCEQLF 59 (206)
T ss_dssp CEEEECTTTCCEEEECSSSC---CSSEEEETTEEEETTTCCBC
T ss_pred eeEEECCCCCCccCCCCccc---CCCcccccccccCCCCCCcC
Confidence 45899999998444444432 1111 244567899998865
No 311
>2a25_A Ubiquitin ligase SIAH1; protein-peptide complex, ligase; 2.20A {Homo sapiens} PDB: 2an6_A 1k2f_A
Probab=49.33 E-value=7.5 Score=30.85 Aligned_cols=12 Identities=25% Similarity=0.509 Sum_probs=6.0
Q ss_pred HHHHhhhhhhcc
Q 030491 59 ASLCSHLEDEHS 70 (176)
Q Consensus 59 ~~L~~H~~eeH~ 70 (176)
..|..|+.+.|.
T Consensus 53 ~~l~~H~~~~H~ 64 (193)
T 2a25_A 53 DAVMPHLMHQHK 64 (193)
T ss_dssp TTHHHHHHHHCT
T ss_pred HHHHHHHHHHCC
Confidence 345555555554
No 312
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=48.93 E-value=7.9 Score=22.79 Aligned_cols=20 Identities=30% Similarity=0.482 Sum_probs=16.5
Q ss_pred cccCCCCCCCC-CHHHHHhhh
Q 030491 46 DFPCPYCYEDF-DIASLCSHL 65 (176)
Q Consensus 46 ~F~CPFC~e~f-Dv~~L~~H~ 65 (176)
-|.|+.|++.| ....|..|.
T Consensus 8 p~~C~~CgK~F~~~s~L~~H~ 28 (36)
T 1fv5_A 8 RFMCLPCGIAFSSPSTLEAHQ 28 (36)
T ss_dssp CCEETTTTEECSCHHHHHHHH
T ss_pred CeECCCCCCccCCHhHccCcC
Confidence 69999999954 567888887
No 313
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.43 E-value=0.7 Score=30.46 Aligned_cols=42 Identities=26% Similarity=0.591 Sum_probs=22.4
Q ss_pred CCcccCCCCCCCCCHH----HH-HhhhhhhccCC---CcceecCcccccc
Q 030491 44 RPDFPCPYCYEDFDIA----SL-CSHLEDEHSCE---SKVTVCPICSVKV 85 (176)
Q Consensus 44 r~~F~CPFC~e~fDv~----~L-~~H~~eeH~~e---~k~vVCPICaa~~ 85 (176)
.....||.|.+.|... .| |.|.-=.++.. ..+..||+|...+
T Consensus 21 ~~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~~~~CP~Cr~~~ 70 (75)
T 1x4j_A 21 SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADS 70 (75)
T ss_dssp SSCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHHCSSCTTTCCCC
T ss_pred CCCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHcCCcCcCcCCcC
Confidence 3467899998765532 11 45531111110 1234799998764
No 314
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=48.11 E-value=9 Score=18.89 Aligned_cols=22 Identities=23% Similarity=0.302 Sum_probs=15.3
Q ss_pred cccCC--CCCCC-CCHHHHHhhhhh
Q 030491 46 DFPCP--YCYED-FDIASLCSHLED 67 (176)
Q Consensus 46 ~F~CP--FC~e~-fDv~~L~~H~~e 67 (176)
.|.|+ .|++. -....|..|...
T Consensus 2 ~~~C~~~~C~k~f~~~~~l~~H~~~ 26 (29)
T 2ab3_A 2 VYVCHFENCGRSFNDRRKLNRHKKI 26 (29)
T ss_dssp CEEECSTTTCEEESSHHHHHHHHGG
T ss_pred CCCCcCCcCcCccCCHHHHHHHHHH
Confidence 37788 88884 456777777653
No 315
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=47.65 E-value=5 Score=27.76 Aligned_cols=31 Identities=16% Similarity=0.375 Sum_probs=20.7
Q ss_pred CCCCcccCCCCCCCCCHHHHHhhhhhhccCCCcceecCcccc
Q 030491 42 DVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSV 83 (176)
Q Consensus 42 d~r~~F~CPFC~e~fDv~~L~~H~~eeH~~e~k~vVCPICaa 83 (176)
.+.....||.|.-.+.... +....+||-|..
T Consensus 4 ~LL~iL~CP~ck~~L~~~~-----------~~~~LiC~~cg~ 34 (70)
T 2js4_A 4 RLLDILVCPVCKGRLEFQR-----------AQAELVCNADRL 34 (70)
T ss_dssp CCCCCCBCTTTCCBEEEET-----------TTTEEEETTTTE
T ss_pred HHhhheECCCCCCcCEEeC-----------CCCEEEcCCCCc
Confidence 4567899999977443211 245689999854
No 316
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=47.57 E-value=6.8 Score=27.10 Aligned_cols=14 Identities=36% Similarity=0.823 Sum_probs=11.6
Q ss_pred CCCCCcccCCCCCC
Q 030491 41 DDVRPDFPCPYCYE 54 (176)
Q Consensus 41 dd~r~~F~CPFC~e 54 (176)
+|++..|.||.|+.
T Consensus 35 ~~lPddw~CP~Cga 48 (70)
T 1dx8_A 35 VDLSDSFMCPACRS 48 (70)
T ss_dssp GGSCTTCBCTTTCC
T ss_pred hhCCCCCcCCCCCC
Confidence 35778899999987
No 317
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=47.30 E-value=3.3 Score=30.60 Aligned_cols=38 Identities=32% Similarity=0.720 Sum_probs=22.6
Q ss_pred cccCCCCCCCCCH-HHH-Hhh-----hhhhccCCCcceecCcccccc
Q 030491 46 DFPCPYCYEDFDI-ASL-CSH-----LEDEHSCESKVTVCPICSVKV 85 (176)
Q Consensus 46 ~F~CPFC~e~fDv-~~L-~~H-----~~eeH~~e~k~vVCPICaa~~ 85 (176)
.+.||.|.+.|.. ..| |.| |....- .+...||+|...+
T Consensus 53 ~~~C~iC~~~~~~~~~~~CgH~fc~~Ci~~~~--~~~~~CP~Cr~~~ 97 (138)
T 4ayc_A 53 ELQCIICSEYFIEAVTLNCAHSFCSYCINEWM--KRKIECPICRKDI 97 (138)
T ss_dssp HSBCTTTCSBCSSEEEETTSCEEEHHHHHHHT--TTCSBCTTTCCBC
T ss_pred cCCCcccCcccCCceECCCCCCccHHHHHHHH--HcCCcCCCCCCcC
Confidence 6889999884432 222 333 443332 2345799998765
No 318
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=46.69 E-value=0.79 Score=32.44 Aligned_cols=12 Identities=25% Similarity=0.578 Sum_probs=9.4
Q ss_pred cceecCcccccc
Q 030491 74 KVTVCPICSVKV 85 (176)
Q Consensus 74 k~vVCPICaa~~ 85 (176)
....||+|.+..
T Consensus 81 ~~~~CP~CR~~~ 92 (114)
T 1v87_A 81 GSLQCPSCKTIY 92 (114)
T ss_dssp SCCBCTTTCCBS
T ss_pred CCCcCCCCCCcc
Confidence 457899998765
No 319
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=46.35 E-value=13 Score=19.91 Aligned_cols=22 Identities=23% Similarity=0.353 Sum_probs=16.9
Q ss_pred cccCCC--CCC-CCCHHHHHhhhhh
Q 030491 46 DFPCPY--CYE-DFDIASLCSHLED 67 (176)
Q Consensus 46 ~F~CPF--C~e-~fDv~~L~~H~~e 67 (176)
.|.|++ |++ --....|..|...
T Consensus 6 ~~~C~~~~C~k~f~~~~~L~~H~~~ 30 (38)
T 1bhi_A 6 PFLCTAPGCGQRFTNEDHLAVHKHK 30 (38)
T ss_dssp CEECCCTTTCCEESSHHHHHHHHHH
T ss_pred ceECCCCCCCcccCCHHHHHHHHHH
Confidence 599995 999 4466778888754
No 320
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=45.88 E-value=8.5 Score=26.40 Aligned_cols=30 Identities=23% Similarity=0.438 Sum_probs=22.9
Q ss_pred CCcccCCCCCCCCCHHHHHhhhhhhccCCCcceecCcccccc
Q 030491 44 RPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKV 85 (176)
Q Consensus 44 r~~F~CPFC~e~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~ 85 (176)
.-.|.|.-|+.++++. ....+.||-|..++
T Consensus 19 ~v~Y~C~~Cg~~~~l~------------~~~~iRC~~CG~RI 48 (63)
T 3h0g_L 19 TMIYLCADCGARNTIQ------------AKEVIRCRECGHRV 48 (63)
T ss_dssp CCCCBCSSSCCBCCCC------------SSSCCCCSSSCCCC
T ss_pred CeEEECCCCCCeeecC------------CCCceECCCCCcEE
Confidence 4579999999977743 23568999998764
No 321
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=45.32 E-value=0.98 Score=32.19 Aligned_cols=44 Identities=16% Similarity=0.251 Sum_probs=24.3
Q ss_pred CCCCcccCCCCCCCCCHHH--HHhh-----hhhhccCCCcceecCcccccch
Q 030491 42 DVRPDFPCPYCYEDFDIAS--LCSH-----LEDEHSCESKVTVCPICSVKVA 86 (176)
Q Consensus 42 d~r~~F~CPFC~e~fDv~~--L~~H-----~~eeH~~e~k~vVCPICaa~~s 86 (176)
+....|.||.|.+.+.... -|.| |....-.. ....||+|...+.
T Consensus 19 ~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~-~~~~CP~Cr~~~~ 69 (116)
T 1rmd_A 19 HFVKSISCQICEHILADPVETSCKHLFCRICILRCLKV-MGSYCPSCRYPCF 69 (116)
T ss_dssp HHHHHTBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHH-TCSBCTTTCCBCC
T ss_pred hccCCCCCCCCCcHhcCcEEcCCCCcccHHHHHHHHhH-CcCcCCCCCCCCC
Confidence 3455899999988554321 1222 22222111 1357999988764
No 322
>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=44.76 E-value=19 Score=25.41 Aligned_cols=27 Identities=22% Similarity=0.550 Sum_probs=21.1
Q ss_pred cccCCC--CCCCC-CHHHHHhhhhhhccCC
Q 030491 46 DFPCPY--CYEDF-DIASLCSHLEDEHSCE 72 (176)
Q Consensus 46 ~F~CPF--C~e~f-Dv~~L~~H~~eeH~~e 72 (176)
-|.|++ |++-| ....|..|....|..+
T Consensus 27 PYkC~~~~CgKaFsr~s~L~~H~rriHTgE 56 (73)
T 1x3c_A 27 PYRCVHQGCFAAFTIQQNLILHYQAVHKSD 56 (73)
T ss_dssp SCBCCSTTCCCBCSSHHHHHHHHHHHSSSC
T ss_pred CeECCCCCcChhHcCHHHHHHHhhhhCCCC
Confidence 599976 99955 5667889988778754
No 323
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=44.64 E-value=5.6 Score=28.41 Aligned_cols=11 Identities=27% Similarity=0.794 Sum_probs=8.9
Q ss_pred cCCCCCCCCCH
Q 030491 48 PCPYCYEDFDI 58 (176)
Q Consensus 48 ~CPFC~e~fDv 58 (176)
+||.||..++.
T Consensus 49 ~CPvCgs~l~~ 59 (112)
T 1l8d_A 49 KCPVCGRELTD 59 (112)
T ss_dssp ECTTTCCEECH
T ss_pred CCCCCCCcCCH
Confidence 69999987774
No 324
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=44.40 E-value=4.7 Score=27.73 Aligned_cols=31 Identities=13% Similarity=0.289 Sum_probs=20.6
Q ss_pred CCCCcccCCCCCCCCCHHHHHhhhhhhccCCCcceecCcccc
Q 030491 42 DVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSV 83 (176)
Q Consensus 42 d~r~~F~CPFC~e~fDv~~L~~H~~eeH~~e~k~vVCPICaa 83 (176)
.+.....||.|.-.+.... +....+||-|..
T Consensus 4 ~LL~iL~CP~ck~~L~~~~-----------~~~~LiC~~cg~ 34 (68)
T 2hf1_A 4 KFLEILVCPLCKGPLVFDK-----------SKDELICKGDRL 34 (68)
T ss_dssp CCEEECBCTTTCCBCEEET-----------TTTEEEETTTTE
T ss_pred HHhhheECCCCCCcCeEeC-----------CCCEEEcCCCCc
Confidence 4456889999987544221 245689999854
No 325
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=43.82 E-value=5.4 Score=27.52 Aligned_cols=31 Identities=10% Similarity=0.341 Sum_probs=20.6
Q ss_pred CCCCcccCCCCCCCCCHHHHHhhhhhhccCCCcceecCcccc
Q 030491 42 DVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSV 83 (176)
Q Consensus 42 d~r~~F~CPFC~e~fDv~~L~~H~~eeH~~e~k~vVCPICaa 83 (176)
.+.....||.|.-.+... .+....+||-|..
T Consensus 4 ~LLeiL~CP~ck~~L~~~-----------~~~~~LiC~~cg~ 34 (69)
T 2pk7_A 4 KLLDILACPICKGPLKLS-----------ADKTELISKGAGL 34 (69)
T ss_dssp CGGGTCCCTTTCCCCEEC-----------TTSSEEEETTTTE
T ss_pred HHHhheeCCCCCCcCeEe-----------CCCCEEEcCCCCc
Confidence 445689999997754421 1245689999854
No 326
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=43.10 E-value=6.7 Score=26.96 Aligned_cols=33 Identities=9% Similarity=0.142 Sum_probs=21.6
Q ss_pred CCCCCCcccCCCCCCCCCHHHHHhhhhhhccCCCcceecCcccc
Q 030491 40 EDDVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSV 83 (176)
Q Consensus 40 ddd~r~~F~CPFC~e~fDv~~L~~H~~eeH~~e~k~vVCPICaa 83 (176)
|..+.....||.|.-.+.... +....+||-|..
T Consensus 4 d~~LLeiL~CP~ck~~L~~~~-----------~~g~LvC~~c~~ 36 (67)
T 2jny_A 4 DPQLLEVLACPKDKGPLRYLE-----------SEQLLVNERLNL 36 (67)
T ss_dssp CGGGTCCCBCTTTCCBCEEET-----------TTTEEEETTTTE
T ss_pred CHHHHHHhCCCCCCCcCeEeC-----------CCCEEEcCCCCc
Confidence 335567899999977443221 245689999854
No 327
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=42.53 E-value=4.5 Score=28.41 Aligned_cols=35 Identities=23% Similarity=0.462 Sum_probs=23.3
Q ss_pred ccCCCCCCCCCHHHHHhhhhhhccCCCcceecCcccccch
Q 030491 47 FPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVA 86 (176)
Q Consensus 47 F~CPFC~e~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~s 86 (176)
..||.|.+.++...+.. -........||||-....
T Consensus 49 ~~CP~Cr~~~~~~~l~~-----l~i~~~~~~C~iC~~~~~ 83 (133)
T 4ap4_A 49 NTCPTCRKKINHKRYHP-----IYIGSGTVSCPICMDGYS 83 (133)
T ss_dssp SBCTTTCCBCTTTCEEE-----CBCSSSSCBCTTTCCBHH
T ss_pred CCCCCCCCcCccccccc-----cccCCCCCCCCCCCCccc
Confidence 48999998776544322 123455688999987653
No 328
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=41.91 E-value=20 Score=21.46 Aligned_cols=12 Identities=42% Similarity=0.991 Sum_probs=8.4
Q ss_pred cccCCCCCCCCC
Q 030491 46 DFPCPYCYEDFD 57 (176)
Q Consensus 46 ~F~CPFC~e~fD 57 (176)
.+.||.|.+.+.
T Consensus 5 ~~~C~IC~~~~~ 16 (55)
T 2ecm_A 5 SSGCPICLEDIH 16 (55)
T ss_dssp CCSCTTTCCCCC
T ss_pred CCcCcccChhhc
Confidence 467888877663
No 329
>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.75 E-value=14 Score=25.88 Aligned_cols=18 Identities=11% Similarity=0.220 Sum_probs=13.6
Q ss_pred hhhHHHHhhhhccchhhh
Q 030491 86 ARDMLSHITLQHGHLFKL 103 (176)
Q Consensus 86 s~d~l~HL~~rH~~~~k~ 103 (176)
+.+|.+||...|...++.
T Consensus 48 TS~L~rHL~~~H~~e~~~ 65 (76)
T 2djr_A 48 TTALWKHLKSMHREELEK 65 (76)
T ss_dssp SCHHHHHHHHTTHHHHHH
T ss_pred hHHHHHHHHHHCHHHHHh
Confidence 457888888888877754
No 330
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=38.99 E-value=29 Score=25.84 Aligned_cols=34 Identities=21% Similarity=0.311 Sum_probs=22.8
Q ss_pred CcccCC---CCCC-CCCHHHHHhhhhhhccCCCcceec
Q 030491 45 PDFPCP---YCYE-DFDIASLCSHLEDEHSCESKVTVC 78 (176)
Q Consensus 45 ~~F~CP---FC~e-~fDv~~L~~H~~eeH~~e~k~vVC 78 (176)
..|-|+ .|-+ -+++.+|..|++..|....+.+..
T Consensus 57 ~if~C~~~~~CkrtyLs~rdlqaHI~~~H~~~~~~~~~ 94 (101)
T 3vk6_A 57 SLFMCSIVQGCKRTYLSQRDLQAHINHRHMRAGKPVTR 94 (101)
T ss_dssp GCCCCCCCCCCCCCCSSHHHHHHHHHHHTTTSCCCCCS
T ss_pred CEEECCCCCCHHHHhcCHHHHHHHHHHHhhhcCCCCCC
Confidence 367776 5766 777777777777777766655443
No 331
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=36.11 E-value=4.1 Score=29.67 Aligned_cols=31 Identities=19% Similarity=0.282 Sum_probs=17.1
Q ss_pred CcccCCCCCC-CCCHHHHHhhhhhhccCCCcceecC
Q 030491 45 PDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCP 79 (176)
Q Consensus 45 ~~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCP 79 (176)
..|.||||.. .=. ..-+..+...+.+.+.=|
T Consensus 29 ~dy~Cp~C~~~~~~----~~~l~~~~~~~~~~~~~~ 60 (184)
T 4dvc_A 29 FSFYCPHCNTFEPI----IAQLKQQLPEGAKFQKNH 60 (184)
T ss_dssp ECTTCHHHHHHHHH----HHHHHHTSCTTCEEEEEE
T ss_pred ECCCCHhHHHHhHH----HHHHHhhcCCceEEEEEe
Confidence 3699999976 322 233445555544444333
No 332
>2l8e_A Polyhomeotic-like protein 1; DNA binding protein; NMR {Homo sapiens}
Probab=36.10 E-value=16 Score=23.76 Aligned_cols=12 Identities=25% Similarity=0.525 Sum_probs=8.4
Q ss_pred CcccCCCCCCCC
Q 030491 45 PDFPCPYCYEDF 56 (176)
Q Consensus 45 ~~F~CPFC~e~f 56 (176)
..-.|++||+.+
T Consensus 17 ~~~~C~~CG~~i 28 (49)
T 2l8e_A 17 NLLKCEYCGKYA 28 (49)
T ss_dssp SEEECTTTCCEE
T ss_pred CCCcChhccCcc
Confidence 345699999844
No 333
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=36.07 E-value=20 Score=32.17 Aligned_cols=24 Identities=17% Similarity=0.578 Sum_probs=21.1
Q ss_pred CcccCCCCCC-CCCHHHHHhhhhhh
Q 030491 45 PDFPCPYCYE-DFDIASLCSHLEDE 68 (176)
Q Consensus 45 ~~F~CPFC~e-~fDv~~L~~H~~ee 68 (176)
..-.||-||. .||+.++..-+++.
T Consensus 270 ~~ISCPtCGRt~~dl~~~~~~ie~~ 294 (366)
T 3noy_A 270 EIVACPTCGRIEVDLPKVVKEVQEK 294 (366)
T ss_dssp EEEECCCCTTCCSCHHHHHHHHHHH
T ss_pred EEEECCCCCCccccHHHHHHHHHHH
Confidence 3589999999 99999999988864
No 334
>1i7f_A Heat shock protein 33; HSP33, redox sensitive molecular chaperone, chaperone; 2.70A {Escherichia coli} SCOP: d.193.1.1 PDB: 1xjh_A
Probab=36.05 E-value=7.6 Score=33.13 Aligned_cols=9 Identities=22% Similarity=0.530 Sum_probs=0.0
Q ss_pred ceecCcccc
Q 030491 75 VTVCPICSV 83 (176)
Q Consensus 75 ~vVCPICaa 83 (176)
.++|-.|..
T Consensus 260 ev~C~FC~~ 268 (292)
T 1i7f_A 260 DMHCDYCGN 268 (292)
T ss_dssp ---------
T ss_pred EEEeeCCCC
Confidence 344555544
No 335
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=35.46 E-value=3.9 Score=31.66 Aligned_cols=20 Identities=20% Similarity=0.532 Sum_probs=15.1
Q ss_pred CcccCCCCCC-CCCHHHHHhh
Q 030491 45 PDFPCPYCYE-DFDIASLCSH 64 (176)
Q Consensus 45 ~~F~CPFC~e-~fDv~~L~~H 64 (176)
..|.||||.. .-.+..+.+.
T Consensus 22 ~D~~Cp~C~~~~~~~~~~l~~ 42 (182)
T 3gn3_A 22 LEPTCPFSVKAFFKLDDLLAQ 42 (182)
T ss_dssp ECTTCHHHHHHHTTHHHHHHH
T ss_pred ECCCCHhHHHHHHHHHHHHHH
Confidence 4799999988 6677666553
No 336
>2czr_A TBP-interacting protein; tata-binding protein (TBP), hyperthermophilic archaeon, Zn-finger motif, transcription; 2.30A {Thermococcus kodakarensis} SCOP: c.52.4.1
Probab=34.66 E-value=7.7 Score=32.42 Aligned_cols=25 Identities=28% Similarity=0.499 Sum_probs=22.6
Q ss_pred CCCcccCCCCCCCCCHHHHHhhhhh
Q 030491 43 VRPDFPCPYCYEDFDIASLCSHLED 67 (176)
Q Consensus 43 ~r~~F~CPFC~e~fDv~~L~~H~~e 67 (176)
.++-|.|-.||+.+|+..|..|+..
T Consensus 151 FWQFYKCe~CgKYvDId~~~~Hlk~ 175 (226)
T 2czr_A 151 FWQFYKCEECGKYVDIENLEAHLRE 175 (226)
T ss_dssp EEEEEECTTTCCEEEGGGHHHHHHT
T ss_pred EEEEEehhhcCceecHHHHHHHHHH
Confidence 4788999999999999999999875
No 337
>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=34.58 E-value=20 Score=24.40 Aligned_cols=35 Identities=23% Similarity=0.272 Sum_probs=24.6
Q ss_pred cccCCCCCCC-CCHHHHHhhhhhhccCCCcceecCccc
Q 030491 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPICS 82 (176)
Q Consensus 46 ~F~CPFC~e~-fDv~~L~~H~~eeH~~e~k~vVCPICa 82 (176)
.|.|+.|++. .....|..|... |.. .++..|..|.
T Consensus 25 py~C~~C~k~F~~~~~L~~H~~~-Ht~-ekp~~C~~~~ 60 (88)
T 1x6f_A 25 TYQCKHCDSKLQSTAELTSHLNI-HNE-EFQKRAKRQE 60 (88)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH-HHH-HHHHHCCCCS
T ss_pred CCcCCCCCCEeCCHHHHHHHHHH-hCC-CCCcccchhh
Confidence 6999999994 456778889765 433 2455676664
No 338
>2kpi_A Uncharacterized protein SCO3027; zinc finger, PSI-2, NESG, all beta, structural genomics, protein structure initiative; NMR {Streptomyces coelicolor}
Probab=34.19 E-value=11 Score=24.93 Aligned_cols=31 Identities=19% Similarity=0.532 Sum_probs=21.2
Q ss_pred CCCCCCcccCCCCCCCCCHHHHHhhhhhhccCCCcceecC--cccc
Q 030491 40 EDDVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCP--ICSV 83 (176)
Q Consensus 40 ddd~r~~F~CPFC~e~fDv~~L~~H~~eeH~~e~k~vVCP--ICaa 83 (176)
|..+.....||.|...+.... ...+|+ -|..
T Consensus 4 d~~lL~iL~CP~c~~~L~~~~-------------~~L~C~~~~c~~ 36 (56)
T 2kpi_A 4 EAGLLEILACPACHAPLEERD-------------AELICTGQDCGL 36 (56)
T ss_dssp CCSCTTSCCCSSSCSCEEEET-------------TEEEECSSSCCC
T ss_pred CHHHHhheeCCCCCCcceecC-------------CEEEcCCcCCCc
Confidence 345677899999977544322 567888 7843
No 339
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=34.14 E-value=6.5 Score=26.05 Aligned_cols=37 Identities=19% Similarity=0.560 Sum_probs=22.9
Q ss_pred CCcccCCCCCCCC-CHHH-------HHhhhhhhccCCCcceecCcccccch
Q 030491 44 RPDFPCPYCYEDF-DIAS-------LCSHLEDEHSCESKVTVCPICSVKVA 86 (176)
Q Consensus 44 r~~F~CPFC~e~f-Dv~~-------L~~H~~eeH~~e~k~vVCPICaa~~s 86 (176)
...+.||.|.+.+ +... +|..|.... ..||+|...+.
T Consensus 22 ~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~------~~CP~Cr~~i~ 66 (74)
T 4ic3_A 22 QEEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAV------DKCPMCYTVIT 66 (74)
T ss_dssp HHHTBCTTTSSSBCCEEEETTCCBCCCHHHHTTC------SBCTTTCCBCS
T ss_pred ccCCCCCCCCCCCCCEEEcCCCChhHHHHhhhcC------ccCCCcCcCcc
Confidence 3468999998844 3332 233333322 78999988764
No 340
>2akl_A PHNA-like protein PA0128; two domains, Zn binding protein, beta-strand protein, structural genomics, PSI; NMR {Pseudomonas aeruginosa PAO1} SCOP: b.34.11.2 g.41.3.5
Probab=33.68 E-value=17 Score=28.53 Aligned_cols=27 Identities=30% Similarity=0.819 Sum_probs=19.0
Q ss_pred cccCCCCCCCCCHHHHHhhhhhhccCCCcceecCccccc
Q 030491 46 DFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVK 84 (176)
Q Consensus 46 ~F~CPFC~e~fDv~~L~~H~~eeH~~e~k~vVCPICaa~ 84 (176)
.=+||-|+.++.- .+....|||-|+--
T Consensus 27 lP~CP~C~seytY------------eDg~l~vCPeC~hE 53 (138)
T 2akl_A 27 LPPCPQCNSEYTY------------EDGALLVCPECAHE 53 (138)
T ss_dssp SCCCTTTCCCCCE------------ECSSSEEETTTTEE
T ss_pred CCCCCCCCCcceE------------ecCCeEECCccccc
Confidence 4679999775531 24567899999864
No 341
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=33.65 E-value=4.4 Score=25.73 Aligned_cols=39 Identities=31% Similarity=0.587 Sum_probs=21.0
Q ss_pred cccCCCCCCCCCHH---HHHhhh-----hhhccCCCcceecCcccccch
Q 030491 46 DFPCPYCYEDFDIA---SLCSHL-----EDEHSCESKVTVCPICSVKVA 86 (176)
Q Consensus 46 ~F~CPFC~e~fDv~---~L~~H~-----~eeH~~e~k~vVCPICaa~~s 86 (176)
...||.|.+.+... .-|.|. ..... .....||+|...+.
T Consensus 5 ~~~C~IC~~~~~~~~~~~~C~H~fc~~Ci~~~~--~~~~~CP~Cr~~~~ 51 (68)
T 1chc_A 5 AERCPICLEDPSNYSMALPCLHAFCYVCITRWI--RQNPTCPLCKVPVE 51 (68)
T ss_dssp CCCCSSCCSCCCSCEEETTTTEEESTTHHHHHH--HHSCSTTTTCCCCC
T ss_pred CCCCeeCCccccCCcEecCCCCeeHHHHHHHHH--hCcCcCcCCChhhH
Confidence 45799998855431 123332 22111 12357999987764
No 342
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=33.59 E-value=37 Score=22.00 Aligned_cols=25 Identities=28% Similarity=0.518 Sum_probs=21.7
Q ss_pred CcccCC--CCCC-CCCHHHHHhhhhhhc
Q 030491 45 PDFPCP--YCYE-DFDIASLCSHLEDEH 69 (176)
Q Consensus 45 ~~F~CP--FC~e-~fDv~~L~~H~~eeH 69 (176)
..|.|. -|+. .-+...|+.|+..+|
T Consensus 37 ~~~~C~W~~C~~~~~~~~~L~~Hir~~H 64 (64)
T 1zw8_A 37 EPLACNWEDCDFLGDDTASIVNHINAQH 64 (64)
T ss_dssp CCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred CCCEeeCCCCcCCCCChHHHHhhccccC
Confidence 479997 8988 777899999999887
No 343
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=33.47 E-value=8.9 Score=28.59 Aligned_cols=37 Identities=22% Similarity=0.465 Sum_probs=0.0
Q ss_pred cCCCCCCCCCHH--------------------HHHhhhhhhccCCC---cceecCccccc
Q 030491 48 PCPYCYEDFDIA--------------------SLCSHLEDEHSCES---KVTVCPICSVK 84 (176)
Q Consensus 48 ~CPFC~e~fDv~--------------------~L~~H~~eeH~~e~---k~vVCPICaa~ 84 (176)
.|+.|-+.|+.. .-|.|.--.|+... .+..||+|...
T Consensus 50 ~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~~~~CP~Cr~~ 109 (117)
T 4a0k_B 50 NCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNRE 109 (117)
T ss_dssp ------------------------------------------------------------
T ss_pred cCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHcCCcCCCCCCe
Confidence 688888776542 13677766666543 35689999765
No 344
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=32.19 E-value=12 Score=29.06 Aligned_cols=12 Identities=33% Similarity=1.024 Sum_probs=9.5
Q ss_pred ccCCCCCCCCCH
Q 030491 47 FPCPYCYEDFDI 58 (176)
Q Consensus 47 F~CPFC~e~fDv 58 (176)
|.||+|..++..
T Consensus 3 ~~Cp~C~~~~~~ 14 (269)
T 1p91_A 3 FSCPLCHQPLSR 14 (269)
T ss_dssp BBCTTTCCBCEE
T ss_pred ccCCCCCcccee
Confidence 889999886643
No 345
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=32.12 E-value=14 Score=27.37 Aligned_cols=10 Identities=20% Similarity=0.494 Sum_probs=8.5
Q ss_pred CcccCCCCCC
Q 030491 45 PDFPCPYCYE 54 (176)
Q Consensus 45 ~~F~CPFC~e 54 (176)
..|.||||..
T Consensus 30 ~d~~Cp~C~~ 39 (195)
T 2znm_A 30 FGYFCVHCHH 39 (195)
T ss_dssp ECTTSCCTTS
T ss_pred ECCCChhHHH
Confidence 3699999988
No 346
>2jvm_A Uncharacterized protein; alpha+beta, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Rhodobacter sphaeroides 2}
Probab=30.20 E-value=18 Score=25.99 Aligned_cols=12 Identities=25% Similarity=0.697 Sum_probs=9.4
Q ss_pred CcccCCCCCCCC
Q 030491 45 PDFPCPYCYEDF 56 (176)
Q Consensus 45 ~~F~CPFC~e~f 56 (176)
..-.|||||.-|
T Consensus 52 g~~~CpYCg~~f 63 (80)
T 2jvm_A 52 GFVECGYCDRRY 63 (80)
T ss_dssp CEEECSSSSCEE
T ss_pred CeEECCCCCCEE
Confidence 468899999844
No 347
>2jrr_A Uncharacterized protein; solution structure, SIR90, structural genomics, PSI-2, protein structure initiative; NMR {Silicibacter pomeroyi}
Probab=29.64 E-value=17 Score=25.21 Aligned_cols=10 Identities=40% Similarity=0.846 Sum_probs=8.0
Q ss_pred CcccCCCCCC
Q 030491 45 PDFPCPYCYE 54 (176)
Q Consensus 45 ~~F~CPFC~e 54 (176)
....|||||.
T Consensus 39 g~~~CpYCg~ 48 (67)
T 2jrr_A 39 GWVECPYCDC 48 (67)
T ss_dssp SEEEETTTTE
T ss_pred CeEECCCCCC
Confidence 3678999986
No 348
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=29.09 E-value=13 Score=32.76 Aligned_cols=30 Identities=17% Similarity=0.203 Sum_probs=18.8
Q ss_pred CcccCCCCCCCCCHHHHHhhhhhhccCCCcceecCccc-ccchh
Q 030491 45 PDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICS-VKVAR 87 (176)
Q Consensus 45 ~~F~CPFC~e~fDv~~L~~H~~eeH~~e~k~vVCPICa-a~~s~ 87 (176)
+.-.|||||..+. .+-+.-+||||- +.+|.
T Consensus 286 ~~v~Cp~cgA~y~-------------~~~kG~lC~vC~l~~IG~ 316 (325)
T 3mv2_A 286 PSVSDPLTGSKYV-------------ITEKDKIDRIAMISKIGA 316 (325)
T ss_dssp CEEECTTTCCEEE-------------GGGTTSBCSSSSCBBTTC
T ss_pred CCccCCCCCCeec-------------hhhCCCCCCCCcCcccCC
Confidence 3468999987432 123456999994 34554
No 349
>3mwm_A ZUR, putative metal uptake regulation protein; FUR, regulatory metal, graded transcription regulation, transcription; 2.40A {Streptomyces coelicolor}
Probab=28.35 E-value=22 Score=26.28 Aligned_cols=40 Identities=15% Similarity=0.352 Sum_probs=28.6
Q ss_pred CcccCCCCCC--CCCH---HHHHhhhhhhccCCCc------ceecCccccc
Q 030491 45 PDFPCPYCYE--DFDI---ASLCSHLEDEHSCESK------VTVCPICSVK 84 (176)
Q Consensus 45 ~~F~CPFC~e--~fDv---~~L~~H~~eeH~~e~k------~vVCPICaa~ 84 (176)
.-|-|--||+ +|+. ..+...+...+.++.. .++||-|...
T Consensus 86 ~HliC~~Cg~v~~~~~~~~~~~~~~~~~~~gf~i~~~~l~~~GiC~~C~~~ 136 (139)
T 3mwm_A 86 HHLVCRACGKAVEVEGPAVEKWAEAIAAEHGYVNVAHTVEIFGTCADCAGA 136 (139)
T ss_dssp EEEEETTTCCEEEECCHHHHHHHHHHHHHTTCCSCCCCCEEEECCHHHHCC
T ss_pred cEEEECCCCCEeecccccHHHHHHHHHHhCCCEEEeeEEEEEEEChHHhCc
Confidence 3589999999 7764 4456677777777543 3789999764
No 350
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=27.96 E-value=15 Score=21.28 Aligned_cols=22 Identities=27% Similarity=0.600 Sum_probs=15.9
Q ss_pred cccCC--CCCCCCC-HHHHHhhhhh
Q 030491 46 DFPCP--YCYEDFD-IASLCSHLED 67 (176)
Q Consensus 46 ~F~CP--FC~e~fD-v~~L~~H~~e 67 (176)
.|.|+ .|++.|. ...|..|...
T Consensus 18 ~~~C~~~~C~k~F~~~~~L~~H~~~ 42 (47)
T 1ncs_A 18 TFECLFPGCTKTFKRRYNIRSHIQT 42 (47)
T ss_dssp EEECCCTTCCCEECSSSSHHHHHHH
T ss_pred CeECCCCCCCCccCCHHHHHHHHHH
Confidence 69996 5999554 4668888764
No 351
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=27.54 E-value=14 Score=24.37 Aligned_cols=34 Identities=18% Similarity=0.513 Sum_probs=23.2
Q ss_pred cccCCCCCC-CCCHHHHHhhhhhhccCCCcceecCcccccchhhHH
Q 030491 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKVARDML 90 (176)
Q Consensus 46 ~F~CPFC~e-~fDv~~L~~H~~eeH~~e~k~vVCPICaa~~s~d~l 90 (176)
...||.|+. .+. .. .+...+||..|-..+..+.+
T Consensus 11 ~~~Cp~C~~~~lv---------~D--~~~ge~vC~~CGlVl~e~~i 45 (58)
T 1dl6_A 11 RVTCPNHPDAILV---------ED--YRAGDMICPECGLVVGDRVI 45 (58)
T ss_dssp CCSBTTBSSSCCE---------EC--SSSCCEECTTTCCEECCSCC
T ss_pred cccCcCCCCCcee---------Ee--CCCCeEEeCCCCCEEecccc
Confidence 457999987 431 12 24567999999887766544
No 352
>3h0l_B Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; multi protein complex, ligase, protein biosynthesis; HET: ADP; 2.30A {Aquifex aeolicus} PDB: 3h0m_B 3h0r_B*
Probab=27.45 E-value=11 Score=34.71 Aligned_cols=18 Identities=28% Similarity=0.650 Sum_probs=14.8
Q ss_pred ccCCCcceecCcccccch
Q 030491 69 HSCESKVTVCPICSVKVA 86 (176)
Q Consensus 69 H~~e~k~vVCPICaa~~s 86 (176)
...+++.-|||||..+||
T Consensus 31 fg~~PNt~v~pv~lg~PG 48 (478)
T 3h0l_B 31 FGAEPNTNVCPVCLGMPG 48 (478)
T ss_dssp TTCCTTCSCCTTTTTCTT
T ss_pred cCCCCccccCccccCCCC
Confidence 345788899999999974
No 353
>2bai_A Genome polyprotein; zinc finger domain, viruses, cardiovirus, structural genomics, PSI, protein structure initiative; NMR {Mengo virus} SCOP: g.87.1.1
Probab=27.30 E-value=6.6 Score=23.81 Aligned_cols=9 Identities=44% Similarity=0.988 Sum_probs=7.4
Q ss_pred eecCccccc
Q 030491 76 TVCPICSVK 84 (176)
Q Consensus 76 vVCPICaa~ 84 (176)
-+||+|.+.
T Consensus 17 ~~CP~CtA~ 25 (32)
T 2bai_A 17 EECPKCSAL 25 (32)
T ss_dssp GGHHHHHCS
T ss_pred cccccccee
Confidence 689999875
No 354
>3al0_B Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase; protein-RNA complex, ligase-RNA complex; HET: GSU; 3.37A {Thermotoga maritima}
Probab=27.12 E-value=11 Score=34.63 Aligned_cols=16 Identities=19% Similarity=0.729 Sum_probs=13.4
Q ss_pred CCCcceecCcccccch
Q 030491 71 CESKVTVCPICSVKVA 86 (176)
Q Consensus 71 ~e~k~vVCPICaa~~s 86 (176)
.+++.-|||||...|+
T Consensus 32 ~~pNt~vcpv~lg~PG 47 (482)
T 3al0_B 32 LPPNTAICPVCTGQPG 47 (482)
T ss_dssp CCTTSSCCTTTTTCTT
T ss_pred CCCcCccCceecCCCC
Confidence 4688899999999974
No 355
>3ip4_B Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase; multi protein complex, ligase, ATP-binding, nucleotide-bindi protein biosynthesis; 1.90A {Staphylococcus aureus subsp} PDB: 2df4_B 2dqn_B* 2g5h_B 2g5i_B* 2f2a_B
Probab=26.32 E-value=12 Score=34.52 Aligned_cols=17 Identities=12% Similarity=-0.056 Sum_probs=14.3
Q ss_pred cCCCcceecCcccccch
Q 030491 70 SCESKVTVCPICSVKVA 86 (176)
Q Consensus 70 ~~e~k~vVCPICaa~~s 86 (176)
..+++.-|||||..+|+
T Consensus 30 g~~PNt~v~pv~lg~PG 46 (483)
T 3ip4_B 30 GAEPNSNTNVIDLAYPG 46 (483)
T ss_dssp CSSTTCSCCTTTTTCTT
T ss_pred CCCCccCcCchhccCCC
Confidence 46788899999999974
No 356
>4ets_A Ferric uptake regulation protein; metal binding protein, transcription factor; 2.10A {Campylobacter jejuni subsp}
Probab=26.14 E-value=28 Score=26.50 Aligned_cols=40 Identities=20% Similarity=0.436 Sum_probs=27.7
Q ss_pred CcccCCCCCC--CCCH---HHHHhhhhhhccCCCc------ceecCccccc
Q 030491 45 PDFPCPYCYE--DFDI---ASLCSHLEDEHSCESK------VTVCPICSVK 84 (176)
Q Consensus 45 ~~F~CPFC~e--~fDv---~~L~~H~~eeH~~e~k------~vVCPICaa~ 84 (176)
.-|-|--||+ +|+. ..+...+...+.+... .++||-|...
T Consensus 106 ~HliC~~CG~v~e~~~~~~~~~~~~~~~~~Gf~i~~~~l~~~GiC~~C~~~ 156 (162)
T 4ets_A 106 DHMICKNCGKIIEFENPIIERQQALIAKEHGFKLTGHLMQLYGVCGDCNNQ 156 (162)
T ss_dssp EEEEETTTCCEEEECCHHHHHHHHHHHHHTTCEEEEEEEEEEEECSTTC--
T ss_pred cEEEECCCCCEEEecccchhHHHHHHHHhCCCEEEEEEEEEEEEChHHcCc
Confidence 3589999999 7763 4566677777777443 3789999765
No 357
>3eyy_A Putative iron uptake regulatory protein; NUR, nickel-uptake regulator, D-domain, dimerization domain, DB-domain, DNA-binding domain; 2.40A {Streptomyces coelicolor}
Probab=25.09 E-value=19 Score=26.79 Aligned_cols=40 Identities=23% Similarity=0.569 Sum_probs=25.3
Q ss_pred CcccCCCCCC--CCCH---HHHHhhhhhhccCCCc------ceecCccccc
Q 030491 45 PDFPCPYCYE--DFDI---ASLCSHLEDEHSCESK------VTVCPICSVK 84 (176)
Q Consensus 45 ~~F~CPFC~e--~fDv---~~L~~H~~eeH~~e~k------~vVCPICaa~ 84 (176)
.-|-|--||+ +++. ..+...+...+.+... .++||-|...
T Consensus 89 ~HliC~~Cg~v~~~~~~~~~~~~~~~~~~~gf~i~~~~l~~~GiC~~C~~~ 139 (145)
T 3eyy_A 89 IHLVCRDCTNVIEADLSVAADFTAKLREQFGFDTDMKHFAIFGRCESCSLK 139 (145)
T ss_dssp EEEEESSSSCEEEECGGGGHHHHHHHHHHTCEEECSCSSCEEEEECC----
T ss_pred eEEEECCCCCEEEecCccHHHHHHHHHHhCCCEEEeEEEEEEEECHHHhCc
Confidence 4699999999 7764 4566677666665322 3889999764
No 358
>3mhs_C SAGA-associated factor 11; multi-protein complex, hydrolase-transcription regulator-Pro binding complex, acetylation, cytoplasm; 1.89A {Saccharomyces cerevisiae} PDB: 3m99_B 3mhh_C 4fjc_C 4fk5_C 4fip_C 2lo2_A 3kjl_E 3kik_E
Probab=25.06 E-value=22 Score=26.49 Aligned_cols=25 Identities=24% Similarity=0.457 Sum_probs=17.7
Q ss_pred CCCcccCCCCCCCCCHHHHHhhhhh
Q 030491 43 VRPDFPCPYCYEDFDIASLCSHLED 67 (176)
Q Consensus 43 ~r~~F~CPFC~e~fDv~~L~~H~~e 67 (176)
....|.||-|+..+...-...|++.
T Consensus 67 ~s~~~~C~nC~R~vaa~RFApHLeK 91 (99)
T 3mhs_C 67 SSQYIHCENCGRDVSANRLAAHLQR 91 (99)
T ss_dssp TSCEEECTTTCCEEEGGGHHHHHHH
T ss_pred CCCeEECCCCCCCchhhhhHHHHHH
Confidence 3457888888887777666666653
No 359
>2k4x_A 30S ribosomal protein S27AE; metal-binding, ribonucleoprotein, zinc, zinc-finger, structural genomics, PSI-2; NMR {Thermoplasma acidophilum} SCOP: g.41.8.8
Probab=25.05 E-value=62 Score=21.09 Aligned_cols=29 Identities=31% Similarity=0.544 Sum_probs=19.2
Q ss_pred CCcccCCCCCCCCCHHHHHhhhhhhccCCCcceecCcccc
Q 030491 44 RPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSV 83 (176)
Q Consensus 44 r~~F~CPFC~e~fDv~~L~~H~~eeH~~e~k~vVCPICaa 83 (176)
+....||-||..+-.+ .|. ....|+-|--
T Consensus 16 ~~~~fCPkCG~~~~ma--------~~~---dr~~C~kCgy 44 (55)
T 2k4x_A 16 RKHRFCPRCGPGVFLA--------EHA---DRYSCGRCGY 44 (55)
T ss_dssp CSSCCCTTTTTTCCCE--------ECS---SEEECTTTCC
T ss_pred EccccCcCCCCceeEe--------ccC---CEEECCCCCC
Confidence 5679999999855222 232 2678988854
No 360
>2j9u_B VPS36, vacuolar protein sorting-associated protein 36; zinc-finger, metal-binding, protein transport; 2.00A {Saccharomyces cerevisiae} SCOP: g.41.11.1
Probab=24.73 E-value=21 Score=25.47 Aligned_cols=10 Identities=60% Similarity=1.218 Sum_probs=8.0
Q ss_pred ceecCccccc
Q 030491 75 VTVCPICSVK 84 (176)
Q Consensus 75 ~vVCPICaa~ 84 (176)
.-|||||...
T Consensus 17 tWVCpICsfs 26 (76)
T 2j9u_B 17 TWVCPICMVS 26 (76)
T ss_dssp EEECTTTCCE
T ss_pred ceECcccccc
Confidence 4689999864
No 361
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.52 E-value=13 Score=24.45 Aligned_cols=38 Identities=21% Similarity=0.561 Sum_probs=23.1
Q ss_pred CCcccCCCCCCCC-CHHH-------HHhhhhhhccCCCcceecCcccccchh
Q 030491 44 RPDFPCPYCYEDF-DIAS-------LCSHLEDEHSCESKVTVCPICSVKVAR 87 (176)
Q Consensus 44 r~~F~CPFC~e~f-Dv~~-------L~~H~~eeH~~e~k~vVCPICaa~~s~ 87 (176)
...+.||.|.+.+ +... +|..|.. +...||+|...+..
T Consensus 23 ~~~~~C~IC~~~~~~~~~~pCgH~~~C~~C~~------~~~~CP~Cr~~i~~ 68 (75)
T 2ecg_A 23 QEEKLCKICMDRNIAIVFVPCGHLVTCKQCAE------AVDKCPMCYTVITF 68 (75)
T ss_dssp HHHHSCSSSCSSCCCBCCSSSCCCCBCHHHHH------HCSBCTTTCCBCCC
T ss_pred CCCCCCCcCCCCCCCEEEecCCCHHHHHHHhh------CCCCCccCCceecC
Confidence 4578999998843 3322 2333332 23689999887643
No 362
>2o03_A Probable zinc uptake regulation protein FURB; DNA-binding, helix-turn-helix, zinc binding, GE regulation; 2.70A {Mycobacterium tuberculosis}
Probab=24.24 E-value=51 Score=23.82 Aligned_cols=39 Identities=13% Similarity=0.377 Sum_probs=27.0
Q ss_pred CCcccCCCCCC--CCCH---HHHHhhhhhhccCCCc------ceecCccc
Q 030491 44 RPDFPCPYCYE--DFDI---ASLCSHLEDEHSCESK------VTVCPICS 82 (176)
Q Consensus 44 r~~F~CPFC~e--~fDv---~~L~~H~~eeH~~e~k------~vVCPICa 82 (176)
-.-|.|--||+ +|+. ..+...+...+.+... .++||-|.
T Consensus 81 h~HliC~~Cg~v~~~~~~~~~~~~~~~~~~~gf~i~~~~l~~~G~C~~C~ 130 (131)
T 2o03_A 81 HHHLVCRSCGSTIEVGDHEVEAWAAEVATKHGFSDVSHTIEIFGTCSDCR 130 (131)
T ss_dssp CEEEEETTTCCEEEECCHHHHHHHHHHHHHTTCSSCCCCCEEEECCTTTC
T ss_pred CCEEEeCCCCCEEEECCcCHHHHHHHHHHhcCCEEeccEEEEEEEChhhc
Confidence 34688999999 7763 4456666677766443 37799995
No 363
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=24.00 E-value=40 Score=25.21 Aligned_cols=28 Identities=21% Similarity=0.401 Sum_probs=20.5
Q ss_pred CcccCCCCCCCCCHHHHHhhhhhhccCCCcceecCccccc
Q 030491 45 PDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVK 84 (176)
Q Consensus 45 ~~F~CPFC~e~fDv~~L~~H~~eeH~~e~k~vVCPICaa~ 84 (176)
..|.|--||..|. ..-.+++.||.|.+.
T Consensus 66 ~p~~C~~CG~~F~------------~~~~kPsrCP~CkSe 93 (105)
T 2gmg_A 66 KPAQCRKCGFVFK------------AEINIPSRCPKCKSE 93 (105)
T ss_dssp CCCBBTTTCCBCC------------CCSSCCSSCSSSCCC
T ss_pred ECcChhhCcCeec------------ccCCCCCCCcCCCCC
Confidence 4689999999881 122467999999764
No 364
>2yre_A F-box only protein 30; zinc binding, E3 ubiquitin ligase, SCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.23 E-value=65 Score=23.80 Aligned_cols=46 Identities=17% Similarity=0.270 Sum_probs=28.9
Q ss_pred cccCC-CCCCCCCHHHHHhhhhhhccCCCcceecCc----ccccc-hhhHHHHhh
Q 030491 46 DFPCP-YCYEDFDIASLCSHLEDEHSCESKVTVCPI----CSVKV-ARDMLSHIT 94 (176)
Q Consensus 46 ~F~CP-FC~e~fDv~~L~~H~~eeH~~e~k~vVCPI----Caa~~-s~d~l~HL~ 94 (176)
--+|| .|+..|-.-.|-+|+.. .-. ..+.|+- |..+. -.++..|+.
T Consensus 37 ~i~CP~~Cga~i~rckL~EH~~~--CP~-a~v~C~~~~yGCp~~~~R~~L~~He~ 88 (100)
T 2yre_A 37 LIGCPLVCGAVFHSCKADEHRLL--CPF-ERVPCLNSDFGCPFTMARNKVAEHLE 88 (100)
T ss_dssp EEECTTCCSCEEEHHHHHHHHHH--CSS-SEEECTTTTTTCCCEEESSTHHHHHH
T ss_pred eeeCCcccCCeeehhhHHHHHhh--ccc-ccccccccCcCCceeecHHHHHHHHh
Confidence 45699 79888888999999855 222 2356654 44443 345666653
No 365
>2jz8_A Uncharacterized protein BH09830; zinc binding, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Bartonella henselae str}
Probab=22.77 E-value=24 Score=25.68 Aligned_cols=12 Identities=33% Similarity=0.933 Sum_probs=9.4
Q ss_pred CcccCCCCCCCC
Q 030491 45 PDFPCPYCYEDF 56 (176)
Q Consensus 45 ~~F~CPFC~e~f 56 (176)
..-.|||||.-|
T Consensus 47 g~~~CpYCg~~y 58 (87)
T 2jz8_A 47 DEKICPYCSTLY 58 (87)
T ss_dssp CEECCTTTCCEE
T ss_pred CeEECCCCCCEe
Confidence 468999999844
No 366
>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}
Probab=22.47 E-value=51 Score=22.29 Aligned_cols=19 Identities=32% Similarity=0.725 Sum_probs=15.8
Q ss_pred ccCCCCCC--CCCHHHHHhhh
Q 030491 47 FPCPYCYE--DFDIASLCSHL 65 (176)
Q Consensus 47 F~CPFC~e--~fDv~~L~~H~ 65 (176)
=.||||-. +-....|..|-
T Consensus 29 gqCPYC~~~~e~tesAlQaHf 49 (57)
T 2k9h_A 29 GQCPYCMTITEATESALQAHY 49 (57)
T ss_dssp TBCTTTCCBCCSSHHHHHHHH
T ss_pred CCCCcccCcCCcCHHHHHHHH
Confidence 36999977 88899998885
No 367
>3kfu_F Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase; ASPRS, gatcab, ATP-binding, aminoacyl-tRNA synthetase, ligas nucleotide-binding, protein biosynthesis, ligase-RNA comple; HET: H2U 5MU PSU; 3.00A {Thermus thermophilus}
Probab=22.34 E-value=15 Score=33.78 Aligned_cols=17 Identities=24% Similarity=0.595 Sum_probs=14.5
Q ss_pred cCCCcceecCcccccch
Q 030491 70 SCESKVTVCPICSVKVA 86 (176)
Q Consensus 70 ~~e~k~vVCPICaa~~s 86 (176)
..+++.-|||||..+|+
T Consensus 30 g~~PNt~vcpvclglPG 46 (466)
T 3kfu_F 30 GAEPNTHTCPVCLGLPG 46 (466)
T ss_dssp SCCTTSSCCTTTTTCTT
T ss_pred CCCCCCccCccccCCCC
Confidence 56788899999999974
No 368
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=22.33 E-value=4.1 Score=29.64 Aligned_cols=10 Identities=30% Similarity=0.673 Sum_probs=7.5
Q ss_pred ceecCccccc
Q 030491 75 VTVCPICSVK 84 (176)
Q Consensus 75 ~vVCPICaa~ 84 (176)
...||+|...
T Consensus 89 ~~~CP~Cr~~ 98 (106)
T 3dpl_R 89 RQVCPLDNRE 98 (106)
T ss_dssp CSBCSSSCSB
T ss_pred CCcCcCCCCc
Confidence 4679999765
No 369
>3pih_A Uvrabc system protein A; hydrolase, ABC ATPase, DNA repair, nucleotide excision repai hydrolase-DNA complex; HET: DNA; 2.90A {Thermotoga maritima}
Probab=22.14 E-value=29 Score=33.97 Aligned_cols=36 Identities=25% Similarity=0.458 Sum_probs=23.2
Q ss_pred CCcccCCCCCCCCCHHHHHhhhhhhccCCCcceecCccccc
Q 030491 44 RPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVK 84 (176)
Q Consensus 44 r~~F~CPFC~e~fDv~~L~~H~~eeH~~e~k~vVCPICaa~ 84 (176)
-..|.||.||..|..-+ -....+.+..+.||.|.-.
T Consensus 247 s~~~~c~~~~~~~~~~~-----~~~fsfn~p~g~C~~C~G~ 282 (916)
T 3pih_A 247 SENLMCPVCGIGFPEIT-----PKLFSFNSPYGACPNCHGL 282 (916)
T ss_dssp ESSCBCTTTCCCCCCCS-----GGGGCTTSTTTBCTTTTTS
T ss_pred cccccCcccCCccCCCC-----HhhcCCCCCCCcCCeeecc
Confidence 45799999997554211 1223345557999999764
No 370
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=20.80 E-value=12 Score=29.52 Aligned_cols=10 Identities=30% Similarity=1.025 Sum_probs=8.6
Q ss_pred CcccCCCCCC
Q 030491 45 PDFPCPYCYE 54 (176)
Q Consensus 45 ~~F~CPFC~e 54 (176)
..|.||||..
T Consensus 23 ~D~~Cp~C~~ 32 (205)
T 3gmf_A 23 VSYTCPHCSH 32 (205)
T ss_dssp ECTTCHHHHH
T ss_pred ECCCCHHHHH
Confidence 4699999987
No 371
>2xig_A Ferric uptake regulation protein; hpfur, transcription, homeostasis; HET: CIT; 1.85A {Helicobacter pylori}
Probab=20.65 E-value=24 Score=26.39 Aligned_cols=40 Identities=15% Similarity=0.314 Sum_probs=28.0
Q ss_pred CcccCCCCCC--CCC---HHHHHhhhhhhccCCCc------ceecCccccc
Q 030491 45 PDFPCPYCYE--DFD---IASLCSHLEDEHSCESK------VTVCPICSVK 84 (176)
Q Consensus 45 ~~F~CPFC~e--~fD---v~~L~~H~~eeH~~e~k------~vVCPICaa~ 84 (176)
.-|.|--||+ +|+ +..+...+...+.+... .++||-|...
T Consensus 98 ~HliC~~Cg~v~~~~~~~~~~~~~~~~~~~gf~i~~~~l~~~GiC~~C~~~ 148 (150)
T 2xig_A 98 DHIICLHCGKIIEFADPEIENRQNEVVKKYQAKLISHDMKMFVWCKECQES 148 (150)
T ss_dssp EEEEETTTCCEEEECCHHHHHHHHHHHHTTTCEEEEEEEEEEEECHHHHCC
T ss_pred eEEEECCCCCEEEecCCCHHHHHHHHHHHcCCEEeeeEEEEEEEChhhccC
Confidence 4699999999 776 34566666667776443 3779999653
No 372
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=20.48 E-value=10 Score=33.96 Aligned_cols=42 Identities=19% Similarity=0.384 Sum_probs=23.4
Q ss_pred CCcccCCCCCCCCCHHH-------HHhhhhhhccCCCcceecCcccccch
Q 030491 44 RPDFPCPYCYEDFDIAS-------LCSHLEDEHSCESKVTVCPICSVKVA 86 (176)
Q Consensus 44 r~~F~CPFC~e~fDv~~-------L~~H~~eeH~~e~k~vVCPICaa~~s 86 (176)
+....||.|.+.+.... .|..|...... .....||+|...+.
T Consensus 330 ~~~~~C~ICle~~~~pv~lpCGH~FC~~Ci~~wl~-~~~~~CP~CR~~i~ 378 (389)
T 2y1n_A 330 STFQLCKICAENDKDVKIEPCGHLMCTSCLTSWQE-SEGQGCPFCRCEIK 378 (389)
T ss_dssp TSSSBCTTTSSSBCCEEEETTCCEECHHHHHHHHH-HTCSBCTTTCCBCC
T ss_pred CCCCCCCccCcCCCCeEEeCCCChhhHHHHHHHHh-cCCCCCCCCCCccC
Confidence 34579999988443321 12334332211 13568999988764
Done!