BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>030495
MMSATILSSSSCNLIRSSGKQIPSHPKPFLGDGQRILNQLVAKRNPSYHAFQNKKLPHRF
SVFAVTEGSAKSSESEETIPSWAKPDSDEPPPWATDEGKGLTSQGSFEIPFYVYLLTSTI
TAIAAIGSIFEYVNKNPVFGILNSDSIFYAPLLGFFAFTGFPTSRSIGPERCYSFN

High Scoring Gene Products

Symbol, full name Information P value
AT3G51510 protein from Arabidopsis thaliana 5.8e-34

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  030495
        (176 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2081850 - symbol:AT3G51510 "AT3G51510" species...   369  5.8e-34   1


>TAIR|locus:2081850 [details] [associations]
            symbol:AT3G51510 "AT3G51510" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM;IDA] [GO:0009535 "chloroplast thylakoid membrane"
            evidence=IDA] [GO:0000023 "maltose metabolic process" evidence=RCA]
            [GO:0019252 "starch biosynthetic process" evidence=RCA] [GO:0043085
            "positive regulation of catalytic activity" evidence=RCA]
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009535 EMBL:AL133452
            EMBL:AY045815 EMBL:AY052689 EMBL:AY091441 EMBL:AY084217
            IPI:IPI00528719 PIR:T45782 RefSeq:NP_190719.1 UniGene:At.652
            UniGene:At.67865 UniGene:At.75188 IntAct:Q9SCZ8 STRING:Q9SCZ8
            PaxDb:Q9SCZ8 PRIDE:Q9SCZ8 EnsemblPlants:AT3G51510.1 GeneID:824314
            KEGG:ath:AT3G51510 TAIR:At3g51510 eggNOG:NOG299346
            HOGENOM:HOG000029137 InParanoid:Q9SCZ8 OMA:IGSVFEY PhylomeDB:Q9SCZ8
            ProtClustDB:CLSN2684607 ArrayExpress:Q9SCZ8 Genevestigator:Q9SCZ8
            Uniprot:Q9SCZ8
        Length = 181

 Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
 Identities = 72/124 (58%), Positives = 82/124 (66%)

Query:    41 VAKRNPSYHAFQNKKLPHRFSVFAVTEGSAKSSESEETIPSWAKPDSDEPPPWATDEGKG 100
             +A R   +     +    R  V A TEGS KS ESE   PSWA PDSDEPPPWA +EG+ 
Sbjct:    36 LAGRRKGHLLHYERSTVRRLVVTAATEGSKKSKESE---PSWANPDSDEPPPWARNEGRS 92

Query:   101 LTSQGSFEIPFYVYLLXXXXXXXXXXGSIFEYVNKNPVFGILNSDSIFYAPLLGFFAFTG 160
              TSQ SFE+PF+VYLL          GS+FEY +KNPVFGIL SDSIFY P+LGFFA TG
Sbjct:    93 STSQESFEVPFFVYLLASAITAIAAIGSVFEYTSKNPVFGILESDSIFYTPVLGFFALTG 152

Query:   161 FPTS 164
              PTS
Sbjct:   153 IPTS 156


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.136   0.419    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      176       153   0.00081  105 3  11 22  0.38    32
                                                     30  0.41    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  571 (61 KB)
  Total size of DFA:  141 KB (2087 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.69u 0.25s 14.94t   Elapsed:  00:00:01
  Total cpu time:  14.69u 0.25s 14.94t   Elapsed:  00:00:01
  Start:  Sat May 11 03:20:54 2013   End:  Sat May 11 03:20:55 2013

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