BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 030495
         (176 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P29849|PHSM_STRPN Maltodextrin phosphorylase OS=Streptococcus pneumoniae serotype 4
           (strain ATCC BAA-334 / TIGR4) GN=malP PE=3 SV=2
          Length = 752

 Score = 31.2 bits (69), Expect = 3.5,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)

Query: 90  PPPWATDEGKGLTSQGSFEIPFYVYLLTSTITAIAAIGSIFEYVNKN 136
           P  W T++   + S  S+++PF  + LTST+  I   G  +E   KN
Sbjct: 145 PNAWLTEQNWLVRSSRSYQVPFADFTLTSTLYDIDVTG--YETATKN 189


>sp|P97820|M4K4_MOUSE Mitogen-activated protein kinase kinase kinase kinase 4 OS=Mus
           musculus GN=Map4k4 PE=1 SV=1
          Length = 1233

 Score = 31.2 bits (69), Expect = 3.6,   Method: Composition-based stats.
 Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 5/32 (15%)

Query: 66  TEGSAKSSESEETIP-----SWAKPDSDEPPP 92
           +EG ++SS+S+  +P     +W++ DSDE PP
Sbjct: 580 SEGLSQSSDSKSEVPEPTQKAWSRSDSDEVPP 611


>sp|Q5E866|APAH_VIBF1 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical OS=Vibrio fischeri
           (strain ATCC 700601 / ES114) GN=apaH PE=3 SV=1
          Length = 271

 Score = 31.2 bits (69), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 12/36 (33%), Positives = 21/36 (58%)

Query: 58  HRFSVFAVTEGSAKSSESEETIPSWAKPDSDEPPPW 93
           H   + AV++G ++  E ++T P +  PDS+E   W
Sbjct: 66  HDLHLLAVSQGISRVKEKDKTAPIFTAPDSEELLTW 101


>sp|Q9M1D1|BGL27_ARATH Beta-glucosidase 27 OS=Arabidopsis thaliana GN=BGLU27 PE=2 SV=2
          Length = 540

 Score = 29.6 bits (65), Expect = 9.9,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 31/76 (40%), Gaps = 7/76 (9%)

Query: 31  GDGQRILNQLVAKRNPSYHAFQNKKLPHRFSVFAVTEGSA----KSSESEETIPSWAKPD 86
           GD   ++ + + KR PS+ A Q+KKL   F    V   SA       E     P+W    
Sbjct: 288 GDYPAVMKKSIGKRLPSFTAAQSKKLRGSFDFVGVNYYSAFYVKNIDEVNHDKPNWR--- 344

Query: 87  SDEPPPWATDEGKGLT 102
           SD    W  +   G T
Sbjct: 345 SDARIEWRKENNAGQT 360


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.317    0.133    0.400 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,543,802
Number of Sequences: 539616
Number of extensions: 2689737
Number of successful extensions: 7086
Number of sequences better than 100.0: 7
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 7082
Number of HSP's gapped (non-prelim): 8
length of query: 176
length of database: 191,569,459
effective HSP length: 110
effective length of query: 66
effective length of database: 132,211,699
effective search space: 8725972134
effective search space used: 8725972134
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)