Query 030495
Match_columns 176
No_of_seqs 55 out of 57
Neff 2.0
Searched_HMMs 13730
Date Mon Mar 25 23:48:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030495.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/030495hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2vglm2 d.110.4.2 (M:1-141) Mu 18.7 18 0.0013 24.1 1.0 66 1-70 1-73 (141)
2 d1m53a1 b.71.1.1 (A:521-598) I 12.1 44 0.0032 19.7 1.5 22 44-65 9-30 (78)
3 d1aono_ b.35.1.1 (O:) Chaperon 11.3 1.8E+02 0.013 18.2 4.5 50 44-95 22-72 (97)
4 d1uoka1 b.71.1.1 (A:480-558) O 10.2 56 0.0041 19.3 1.5 22 44-65 9-30 (79)
5 d1czan4 c.55.1.3 (N:671-913) M 6.9 32 0.0023 25.7 -0.9 12 112-123 160-171 (243)
6 d1v4sa2 c.55.1.3 (A:219-461) G 6.4 36 0.0026 25.5 -0.9 12 112-123 160-171 (243)
7 d2b5id2 g.18.1.1 (D:103-165) I 6.0 1E+02 0.0076 19.8 1.4 13 88-100 3-15 (63)
8 d1dvpa2 g.50.1.1 (A:149-220) H 5.6 1.1E+02 0.0084 18.6 1.4 10 87-96 4-13 (72)
9 d1p90a_ c.55.5.2 (A:) NafY cor 4.9 58 0.0042 21.0 -0.5 8 88-95 113-120 (123)
10 d2z3va1 c.26.2.4 (A:2-136) Hyp 4.7 1.7E+02 0.012 17.5 1.7 28 11-38 98-126 (135)
No 1
>d2vglm2 d.110.4.2 (M:1-141) Mu2 adaptin (clathrin coat assembly protein AP50) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=18.72 E-value=18 Score=24.09 Aligned_cols=66 Identities=8% Similarity=-0.020 Sum_probs=32.9
Q ss_pred CccceeeccCCcccccccCCcCCCCCCC-ccccchhhhhhhhhc------cCCCccccccccCCceeEEEEEeccCC
Q 030495 1 MMSATILSSSSCNLIRSSGKQIPSHPKP-FLGDGQRILNQLVAK------RNPSYHAFQNKKLPHRFSVFAVTEGSA 70 (176)
Q Consensus 1 m~~a~~~~~~~~~li~~~~~q~~s~~~~-f~gv~~~i~~~~~~~------~~~~~~~~~~~k~~~~~~~~a~t~gsa 70 (176)
|..|.++...+.+.+.+-.-+.. .++. -...+.++++..... ..+-+|+|++.. .+..|++|+.++
T Consensus 1 MI~~i~Iln~~G~~l~~r~y~~~-~~~~~~~~f~~~~~~~~~~~~~pi~~~~~~~~~~~~~~---~l~~v~v~~~~~ 73 (141)
T d2vglm2 1 MIGGLFIYNHKGEVLISRVYRDD-IGRNAVDAFRVNVIHARQQVRSPVTNIARTSFFHVKRS---NIWLAAVTKQNV 73 (141)
T ss_dssp CCCEEEEECTTCCEEEEEECSSS-CCHHHHHHHHHHTTTCSSCCCCSEEEETTEEEEEEEET---TEEEEEEESSCC
T ss_pred CceEEEEEcCCCCEEEEEecCCC-CChHHHHHHHHHHHhccccCCCCeEEECCEEEEEEEEC---CEEEEEEecCCC
Confidence 77777777777776655422211 1111 001122333222221 233456666655 688888887653
No 2
>d1m53a1 b.71.1.1 (A:521-598) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]}
Probab=12.12 E-value=44 Score=19.74 Aligned_cols=22 Identities=14% Similarity=0.169 Sum_probs=17.8
Q ss_pred cCCCccccccccCCceeEEEEE
Q 030495 44 RNPSYHAFQNKKLPHRFSVFAV 65 (176)
Q Consensus 44 ~~~~~~~~~~~k~~~~~~~~a~ 65 (176)
.+++-|+|.|..-.+++.|++=
T Consensus 9 ~~~~v~aY~R~~~~~~~lVv~N 30 (78)
T d1m53a1 9 QDNTVYAYTRTLGNERYLVVVN 30 (78)
T ss_dssp TCSSEEEEEEEETTEEEEEEEE
T ss_pred CCCcEEEEEEEcCCeEEEEEEe
Confidence 3566799999998899888874
No 3
>d1aono_ b.35.1.1 (O:) Chaperonin-10 (GroES) {Escherichia coli [TaxId: 562]}
Probab=11.31 E-value=1.8e+02 Score=18.20 Aligned_cols=50 Identities=18% Similarity=-0.061 Sum_probs=30.9
Q ss_pred cCCCccccccccCCceeEEEEEeccCCCCCCCccCCCCCCCCCCCCC-CCccc
Q 030495 44 RNPSYHAFQNKKLPHRFSVFAVTEGSAKSSESEETIPSWAKPDSDEP-PPWAT 95 (176)
Q Consensus 44 ~~~~~~~~~~~k~~~~~~~~a~t~gsa~s~~s~e~~pswAkp~sde~-PPWaR 95 (176)
..+-+..-..++.++.-.|+|+-.|.- .+..+.+|-|-|+++--+ ++|+.
T Consensus 22 ~gGIiLp~~~~~~~~~g~VvavG~g~~--~~~g~~~~~~vk~GD~Vl~~~~~g 72 (97)
T d1aono_ 22 AGGIVLTGSAAAKSTRGEVLAVGNGRI--LENGEVKPLDVKVGDIVIFNDGYG 72 (97)
T ss_dssp TTSSCCCCCCSCCCCEEEEEEECSBCC--TTSSCCCBCSCCTTCEEEECCCSS
T ss_pred cceEEECCccccCceeEEEEEEeeeEE--ccCCcCccccCCCCCEEEEecccC
Confidence 344444444455566777888866643 345577888999988653 44543
No 4
>d1uoka1 b.71.1.1 (A:480-558) Oligo-1,6-glucosidase {Bacillus cereus [TaxId: 1396]}
Probab=10.18 E-value=56 Score=19.28 Aligned_cols=22 Identities=27% Similarity=0.286 Sum_probs=17.4
Q ss_pred cCCCccccccccCCceeEEEEE
Q 030495 44 RNPSYHAFQNKKLPHRFSVFAV 65 (176)
Q Consensus 44 ~~~~~~~~~~~k~~~~~~~~a~ 65 (176)
.++.-|+|.|....+++.|++=
T Consensus 9 ~~~~V~aY~R~~~~~~~lVv~N 30 (79)
T d1uoka1 9 NNPSIFAYVRTYGVEKLLVIAN 30 (79)
T ss_dssp TCSSEEEEEEEETTEEEEEEEE
T ss_pred CCCcEEEEEEECCCcEEEEEEe
Confidence 3566799999988888887774
No 5
>d1czan4 c.55.1.3 (N:671-913) Mammalian type I hexokinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.91 E-value=32 Score=25.68 Aligned_cols=12 Identities=17% Similarity=0.174 Sum_probs=7.9
Q ss_pred HHHHHHHHHHHH
Q 030495 112 YVYLLTSTITAI 123 (176)
Q Consensus 112 gvyLl~ScItAI 123 (176)
.++|.+++|+||
T Consensus 160 AA~L~Aa~iaai 171 (243)
T d1czan4 160 AAQLCGAGMAAV 171 (243)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 456777777764
No 6
>d1v4sa2 c.55.1.3 (A:219-461) Glucokinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.36 E-value=36 Score=25.47 Aligned_cols=12 Identities=0% Similarity=0.155 Sum_probs=7.8
Q ss_pred HHHHHHHHHHHH
Q 030495 112 YVYLLTSTITAI 123 (176)
Q Consensus 112 gvyLl~ScItAI 123 (176)
.++|.+++|+||
T Consensus 160 aA~L~Aa~i~ai 171 (243)
T d1v4sa2 160 AAHMCSAGLAGV 171 (243)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 456777777764
No 7
>d2b5id2 g.18.1.1 (D:103-165) Interleukin-2 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.03 E-value=1e+02 Score=19.83 Aligned_cols=13 Identities=38% Similarity=1.091 Sum_probs=9.3
Q ss_pred CCCCCcccccCCC
Q 030495 88 DEPPPWATDEGKG 100 (176)
Q Consensus 88 de~PPWaR~E~~~ 100 (176)
.|||||.-...++
T Consensus 3 ~ePp~w~He~~kr 15 (63)
T d2b5id2 3 REPPPWENEATER 15 (63)
T ss_dssp CCCCCCSSCCSSC
T ss_pred CCCCCCCCcccee
Confidence 4899998765544
No 8
>d1dvpa2 g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=5.62 E-value=1.1e+02 Score=18.63 Aligned_cols=10 Identities=40% Similarity=0.979 Sum_probs=6.4
Q ss_pred CCCCCCcccc
Q 030495 87 SDEPPPWATD 96 (176)
Q Consensus 87 sde~PPWaR~ 96 (176)
+|-+|+|..+
T Consensus 4 ~~~~p~W~~~ 13 (72)
T d1dvpa2 4 ADTAPNWADG 13 (72)
T ss_dssp CSCCCCCCCC
T ss_pred CCCCCCCCcC
Confidence 4666778644
No 9
>d1p90a_ c.55.5.2 (A:) NafY core domain {Azotobacter vinelandii [TaxId: 354]}
Probab=4.87 E-value=58 Score=21.04 Aligned_cols=8 Identities=50% Similarity=1.527 Sum_probs=4.7
Q ss_pred CCCCCccc
Q 030495 88 DEPPPWAT 95 (176)
Q Consensus 88 de~PPWaR 95 (176)
..||||-|
T Consensus 113 ~~~p~~l~ 120 (123)
T d1p90a_ 113 GSPPPWLA 120 (123)
T ss_dssp SCCCHHHH
T ss_pred CCCChHHh
Confidence 34666655
No 10
>d2z3va1 c.26.2.4 (A:2-136) Hypothetical protein TTHA0895 {Thermus thermophilus [TaxId: 274]}
Probab=4.74 E-value=1.7e+02 Score=17.55 Aligned_cols=28 Identities=25% Similarity=0.429 Sum_probs=16.8
Q ss_pred CcccccccCCcCCCCCCCccc-cchhhhh
Q 030495 11 SCNLIRSSGKQIPSHPKPFLG-DGQRILN 38 (176)
Q Consensus 11 ~~~li~~~~~q~~s~~~~f~g-v~~~i~~ 38 (176)
+.|||+-+..++....+.|+| +..+++.
T Consensus 98 ~~dliV~G~~~~~~~~~~~~Gs~~~~ll~ 126 (135)
T d2z3va1 98 KADLIVMGTRGLGALGSLFLGSQSQRVVA 126 (135)
T ss_dssp TCSEEEEESSCSSSCBCSSCBHHHHHHHH
T ss_pred heeeEEeccCCCCcccccccCcHHHHHHH
Confidence 567777765555556666665 4445443
Done!