BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030496
(176 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84JP1|NFYA7_ARATH Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana
GN=NFYA7 PE=2 SV=1
Length = 190
Score = 207 bits (528), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 103/152 (67%), Positives = 122/152 (80%), Gaps = 13/152 (8%)
Query: 21 GAGHAMAPAAYPYPDPYYRSIFAPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAV 80
G ++MAP YPYPDPYYRSIFAP PPQPY G VHLQLMG+QQ GVPLP+DAV
Sbjct: 48 GTTNSMAPGQYPYPDPYYRSIFAP------PPQPYTG---VHLQLMGVQQQGVPLPSDAV 98
Query: 81 EEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRRARGCGGRFLNS 140
EEPVFVNAKQYHGILRRRQSRA+ ES+NKV+KSRKPYLHESRHLHA+RR RGCGGRFLN+
Sbjct: 99 EEPVFVNAKQYHGILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNA 158
Query: 141 KKNENQQKGMASDDKSQSNLNLNSDKNEIASS 172
KK + + + ++KS NL++ K+ +A+S
Sbjct: 159 KKEDEHHEDSSHEEKS----NLSAGKSAMAAS 186
>sp|Q8VY64|NFYA4_ARATH Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana
GN=NFYA4 PE=2 SV=1
Length = 198
Score = 182 bits (462), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 91/151 (60%), Positives = 116/151 (76%), Gaps = 10/151 (6%)
Query: 26 MAPAAYPYPDPYYRSIFAPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVF 85
MA YPYPDPYYRS+FA Q Y P PY P V LQLMG+QQ GVPL DAVEEPVF
Sbjct: 48 MAHGLYPYPDPYYRSVFA---QQAYLPHPY---PGVQLQLMGMQQPGVPLQCDAVEEPVF 101
Query: 86 VNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRRARGCGGRFLNSKK--- 142
VNAKQYHGILRRRQSRAK E+ N+ +K++KPY+HESRHLHA+RR RGCGGRFLN+KK
Sbjct: 102 VNAKQYHGILRRRQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKKENG 161
Query: 143 -NENQQKGMASDDKSQSNLNLNSDKNEIASS 172
++ +++ + ++ S+++ +L S+K +A+S
Sbjct: 162 DHKEEEEATSDENTSEASSSLRSEKLAMATS 192
>sp|Q945M9|NFYA9_ARATH Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana
GN=NFYA9 PE=2 SV=1
Length = 303
Score = 130 bits (327), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/168 (45%), Positives = 96/168 (57%), Gaps = 22/168 (13%)
Query: 11 PNVQYATHQVGAGHAMAPAAYPYPDPYYRSIFAPYDAQPYPPQPYGGQPMVHLQLMGIQQ 70
P+ Q H VG ++ PY DPYY + Y P PYGG P +
Sbjct: 110 PHPQLVGHTVGWA-----SSNPYQDPYYAGVMGAYGHHPLGFVPYGGMPHSRM------- 157
Query: 71 AGVPLPTDAVEEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRRA 130
PLP + +EPVFVNAKQY ILRRRQ+RAKAE E K++KSRKPYLHESRH HA+RR
Sbjct: 158 ---PLPPEMAQEPVFVNAKQYQAILRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRP 214
Query: 131 RGCGGRFLNSKKNENQQKGMASDDKS-----QSNLNLNSDKNEIASSD 173
RG GGRF +KK + +++KS QS + NSD+ E + D
Sbjct: 215 RGTGGRF--AKKTNTEASKRKAEEKSNGHVTQSPSSSNSDQGEAWNGD 260
>sp|Q9SYH4|NFYA5_ARATH Nuclear transcription factor Y subunit A-5 OS=Arabidopsis thaliana
GN=NFYA5 PE=2 SV=1
Length = 308
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 58/93 (62%), Positives = 72/93 (77%), Gaps = 1/93 (1%)
Query: 62 HLQLMGIQQAGVPLPTDAVE-EPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHE 120
HL++MG+ + VPLP E EP+FVNAKQYH ILRRR+ RAK E++NK++K RKPYLHE
Sbjct: 157 HLEMMGLVSSRVPLPHHIQENEPIFVNAKQYHAILRRRKHRAKLEAQNKLIKCRKPYLHE 216
Query: 121 SRHLHALRRARGCGGRFLNSKKNENQQKGMASD 153
SRHLHAL+RARG GGRFLN+KK + + S
Sbjct: 217 SRHLHALKRARGSGGRFLNTKKLQESSNSLCSS 249
>sp|Q93ZH2|NFYA3_ARATH Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana
GN=NFYA3 PE=2 SV=2
Length = 340
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 95/151 (62%), Gaps = 16/151 (10%)
Query: 11 PNVQYATHQVGAGHAMAPAAYPYPDPYYRSIFAPYDAQPYPPQPYGGQPMVHLQLMGIQQ 70
PN+ +A A A ++ Y DP+Y + A Y PQ P + Q++ +
Sbjct: 122 PNIHFAP-------AQANFSFHYADPHYGGLLAA----TYLPQA----PTCNPQMVSMIP 166
Query: 71 AGVPLPTDAVE-EPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRR 129
VPLP + E +PVFVNAKQYH I+RRRQ RAK E++NK++++RKPYLHESRH+HAL+R
Sbjct: 167 GRVPLPAELTETDPVFVNAKQYHAIMRRRQQRAKLEAQNKLIRARKPYLHESRHVHALKR 226
Query: 130 ARGCGGRFLNSKKNENQQKGMASDDKSQSNL 160
RG GGRFLN+KK + + A+ ++ Q L
Sbjct: 227 PRGSGGRFLNTKKLLQESEQAAAREQEQDKL 257
>sp|Q9LXV5|NFYA1_ARATH Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana
GN=NFYA1 PE=2 SV=1
Length = 272
Score = 120 bits (300), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 87/156 (55%), Gaps = 16/156 (10%)
Query: 23 GHAMAPAAYPYPDPYYRSIFAPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEE 82
GH +A PY DPYY + Y Q +PY +G+ + LP D +E
Sbjct: 123 GHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPY----------LGMPRERTALPLDMAQE 172
Query: 83 PVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRRARGCGGRFLNSKK 142
PV+VNAKQY GILRRR++RAKAE E KV++ RKPYLHESRH HA+RRAR GGRF +
Sbjct: 173 PVYVNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSE 232
Query: 143 NENQQKGMASDDKSQSNLN------LNSDKNEIASS 172
E + D + S N + +D NE +S
Sbjct: 233 VEAGEDAGGRDRERGSATNSSGSEQVETDSNETLNS 268
>sp|Q9LNP6|NFYA8_ARATH Nuclear transcription factor Y subunit A-8 OS=Arabidopsis thaliana
GN=NFYA8 PE=2 SV=2
Length = 328
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 77/117 (65%), Gaps = 14/117 (11%)
Query: 27 APAAYPYPDPYYRSIFAPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVE-EPVF 85
A ++ Y DP++ + Y PQ P Q VPLP D +E EPVF
Sbjct: 129 ANFSFHYADPHFGGLMPA----AYLPQATIWNP---------QMTRVPLPFDLIENEPVF 175
Query: 86 VNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRRARGCGGRFLNSKK 142
VNAKQ+H I+RRRQ RAK E++NK++K+RKPYLHESRH+HAL+R RG GGRFLN+KK
Sbjct: 176 VNAKQFHAIMRRRQQRAKLEAQNKLIKARKPYLHESRHVHALKRPRGSGGRFLNTKK 232
>sp|Q9LVJ7|NFYA6_ARATH Nuclear transcription factor Y subunit A-6 OS=Arabidopsis thaliana
GN=NFYA6 PE=2 SV=1
Length = 308
Score = 116 bits (290), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/100 (57%), Positives = 74/100 (74%), Gaps = 2/100 (2%)
Query: 54 PYGGQPMV-HLQLMGIQQAGVPLPTDAVE-EPVFVNAKQYHGILRRRQSRAKAESENKVL 111
PY Q V H Q+ G+ + +PLP + E EP+FVNAKQY ILRRR+ RAK E++NK++
Sbjct: 141 PYASQHTVQHPQIRGLVPSRMPLPHNIPENEPIFVNAKQYQAILRRRERRAKLEAQNKLI 200
Query: 112 KSRKPYLHESRHLHALRRARGCGGRFLNSKKNENQQKGMA 151
K RKPYLHESRHLHAL+R RG GGRFLN+KK++ ++
Sbjct: 201 KVRKPYLHESRHLHALKRVRGSGGRFLNTKKHQESNSSLS 240
>sp|Q8LFU0|NFYAA_ARATH Nuclear transcription factor Y subunit A-10 OS=Arabidopsis thaliana
GN=NFYA10 PE=2 SV=2
Length = 269
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 92/164 (56%), Gaps = 23/164 (14%)
Query: 13 VQYATHQVGAGHAMAPAAYPYPDPYYRSIFAPYDAQPYPPQPYGGQPMVHLQLMGIQQAG 72
+Q A + G M +P+ + YY + A Y Q G+ M+ L+ M ++ G
Sbjct: 82 MQSACFEFGFAQPMMYTKHPHVEQYYGVVSA------YGSQRSSGRVMIPLK-METEEDG 134
Query: 73 VPLPTDAVEEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRRARG 132
++VN+KQYHGI+RRRQSRAKAE K+ + RKPY+H SRHLHA+RR RG
Sbjct: 135 T----------IYVNSKQYHGIIRRRQSRAKAE---KLSRCRKPYMHHSRHLHAMRRPRG 181
Query: 133 CGGRFLNSKKNENQQKGMASDDKSQSNLNLNSDKNEIASSDRQS 176
GGRFLN+K + ++ S+ +S + +NE +S R++
Sbjct: 182 SGGRFLNTKTADAAKQSKPSNSQSSEVFH---PENETINSSREA 222
>sp|Q54S29|NFYA_DICDI Nuclear transcription factor Y subunit alpha OS=Dictyostelium
discoideum GN=nfyA PE=3 SV=1
Length = 517
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 52/61 (85%)
Query: 78 DAVEEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRRARGCGGRF 137
+ VEEP++VNAKQY+ IL+RR +RAK ESENK+ K+RK Y HESRH HA+RR RGCGGRF
Sbjct: 225 EIVEEPLYVNAKQYNRILKRRAARAKLESENKLPKTRKAYQHESRHQHAIRRQRGCGGRF 284
Query: 138 L 138
L
Sbjct: 285 L 285
>sp|Q9M9X4|NFYA2_ARATH Nuclear transcription factor Y subunit A-2 OS=Arabidopsis thaliana
GN=NFYA2 PE=2 SV=1
Length = 295
Score = 93.2 bits (230), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 69/123 (56%), Gaps = 24/123 (19%)
Query: 31 YPYPDPYYRSIFAPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQ 90
YPY + Y + + Y G Q V L PL + + ++VN+KQ
Sbjct: 105 YPYGEQQYYGVVSAY----------GSQSRVML----------PLNMETEDSTIYVNSKQ 144
Query: 91 YHGILRRRQSRAKAES--ENKVLKSR--KPYLHESRHLHALRRARGCGGRFLNSKKNENQ 146
YHGI+RRRQSRAKA + + K L SR KPY+H SRHLHALRR RG GGRFLN+K +
Sbjct: 145 YHGIIRRRQSRAKAAAVLDQKKLSSRCRKPYMHHSRHLHALRRPRGSGGRFLNTKSQNLE 204
Query: 147 QKG 149
G
Sbjct: 205 NSG 207
>sp|Q5E9S2|NFYA_BOVIN Nuclear transcription factor Y subunit alpha OS=Bos taurus GN=NFYA
PE=2 SV=1
Length = 341
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
Query: 73 VPLPTDAV--EEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRRA 130
+PLP + EEP++VNAKQYH IL+RRQ+RAK E+E K+ K R+ YLHESRH HA+ R
Sbjct: 246 IPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMARK 305
Query: 131 RGCGGRFLNSKKNEN 145
RG GGRF + K+ ++
Sbjct: 306 RGEGGRFFSPKEKDS 320
>sp|P18576|NFYA_RAT Nuclear transcription factor Y subunit alpha OS=Rattus norvegicus
GN=Nfya PE=1 SV=1
Length = 341
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
Query: 73 VPLPTDAV--EEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRRA 130
+PLP + EEP++VNAKQYH IL+RRQ+RAK E+E K+ K R+ YLHESRH HA+ R
Sbjct: 246 IPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMARK 305
Query: 131 RGCGGRFLNSKKNEN 145
RG GGRF + K+ ++
Sbjct: 306 RGEGGRFFSPKEKDS 320
>sp|P23708|NFYA_MOUSE Nuclear transcription factor Y subunit alpha OS=Mus musculus
GN=Nfya PE=1 SV=2
Length = 346
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
Query: 73 VPLPTDAV--EEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRRA 130
+PLP + EEP++VNAKQYH IL+RRQ+RAK E+E K+ K R+ YLHESRH HA+ R
Sbjct: 251 IPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMARK 310
Query: 131 RGCGGRFLNSKKNEN 145
RG GGRF + K+ ++
Sbjct: 311 RGEGGRFFSPKEKDS 325
>sp|P23511|NFYA_HUMAN Nuclear transcription factor Y subunit alpha OS=Homo sapiens
GN=NFYA PE=1 SV=2
Length = 347
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
Query: 73 VPLPTDAV--EEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRRA 130
+PLP + EEP++VNAKQYH IL+RRQ+RAK E+E K+ K R+ YLHESRH HA+ R
Sbjct: 252 IPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMARK 311
Query: 131 RGCGGRFLNSKKNEN 145
RG GGRF + K+ ++
Sbjct: 312 RGEGGRFFSPKEKDS 326
>sp|P06774|HAP2_YEAST Transcriptional activator HAP2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=HAP2 PE=1 SV=1
Length = 265
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 58/86 (67%), Gaps = 2/86 (2%)
Query: 75 LPTDAVEEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRRARGCG 134
L T E+P +VNAKQY+ IL+RR +RAK E + ++ + RKPYLHESRH HA+RR RG G
Sbjct: 152 LGTAIAEQPFYVNAKQYYRILKRRYARAKLEEKLRISRERKPYLHESRHKHAMRRPRGEG 211
Query: 135 GRFLNSK--KNENQQKGMASDDKSQS 158
GRFL + K +K ASDD S
Sbjct: 212 GRFLTAAEIKAMKSKKSGASDDPDDS 237
>sp|P53768|HAP2_KLULA Transcriptional activator HAP2 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=HAP2 PE=3 SV=1
Length = 300
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 54/78 (69%)
Query: 61 VHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHE 120
+ LQ + P++ +E+P +VNAKQY+ IL+RR +RAK E K+ + R+PYLHE
Sbjct: 164 MELQRTKPHDMNIISPSEPLEQPFYVNAKQYYRILKRRYARAKLEENLKISRERRPYLHE 223
Query: 121 SRHLHALRRARGCGGRFL 138
SRH HA+RR RG GGRFL
Sbjct: 224 SRHKHAMRRPRGQGGRFL 241
>sp|P24488|HAP2_SCHPO Transcriptional activator hap2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=hap2 PE=3 SV=1
Length = 334
Score = 80.5 bits (197), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Query: 82 EPVFVNAKQYHGILRRRQSRAKAESENK-VLKSRKPYLHESRHLHALRRARGCGGRFLNS 140
E ++VNAKQYH IL+RR++RAK E + V ++KPYLHESRH HA+RR RG GGRFL +
Sbjct: 8 EGLYVNAKQYHRILKRREARAKLEERLRGVQTTKKPYLHESRHKHAMRRPRGPGGRFLTA 67
Query: 141 KK 142
K
Sbjct: 68 DK 69
>sp|Q3AAE9|MURA1_CARHZ UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1
OS=Carboxydothermus hydrogenoformans (strain Z-2901 /
DSM 6008) GN=murA1 PE=3 SV=1
Length = 420
Score = 33.9 bits (76), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 54/126 (42%), Gaps = 9/126 (7%)
Query: 39 RSIFAPYDAQ--PYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYHGILR 96
+SI P D + PYP P QP + L L+ + Q T + E VF N ++ LR
Sbjct: 284 KSIIKPVDIKTMPYPGFPTDMQPQI-LALLTLAQG-----TSIISEGVFDNRFKHVEELR 337
Query: 97 RRQSRAKAESENKVLKSRKPYLHESRHLHALRRARGCGGRFLNSKKNENQQKGMASDDKS 156
R + + ES V+K S H LR A L + + +G+ + D+
Sbjct: 338 RMGADIRLESRIAVIKGVPKLTGASVIAHDLRAAAALVIAGL-AAEGMTVLEGIKNLDRG 396
Query: 157 QSNLNL 162
NL+L
Sbjct: 397 YENLDL 402
>sp|A8G786|HEM6_PROM2 Coproporphyrinogen-III oxidase, aerobic OS=Prochlorococcus marinus
(strain MIT 9215) GN=hemF PE=3 SV=1
Length = 342
Score = 30.4 bits (67), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 50/128 (39%), Gaps = 19/128 (14%)
Query: 50 YPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVE----EPVFVNAKQYHGILRRRQSRAKAE 105
+P PY P VHL + V + P + + +H +A +
Sbjct: 102 HPKNPY--IPTVHLNYRYFEAGPVWWFGGGADLTPFYPYLSDVRNFH----NEHKKACEK 155
Query: 106 SENKVLKSRKPYLHESRHLHALRRARGCGGRFLNSK---------KNENQQKGMASDDKS 156
+N + K KP+ E L +RG GG F + + N+N + AS S
Sbjct: 156 VDNDLHKVFKPWCDEYFFLKHRNESRGIGGIFYDYQDGSGNIYRGNNQNGEASKASQSIS 215
Query: 157 QSNLNLNS 164
+SNLN ++
Sbjct: 216 KSNLNWDN 223
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.129 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,701,182
Number of Sequences: 539616
Number of extensions: 3269158
Number of successful extensions: 8461
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 8303
Number of HSP's gapped (non-prelim): 180
length of query: 176
length of database: 191,569,459
effective HSP length: 110
effective length of query: 66
effective length of database: 132,211,699
effective search space: 8725972134
effective search space used: 8725972134
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 57 (26.6 bits)