BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030498
(176 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225459779|ref|XP_002285907.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
[Vitis vinifera]
gi|302141700|emb|CBI18903.3| unnamed protein product [Vitis vinifera]
Length = 176
Score = 277 bits (709), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 131/172 (76%), Positives = 153/172 (88%), Gaps = 2/172 (1%)
Query: 5 SSCGAKEEEVEVGDYNSSTMKKARLHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGS 64
SS G K EE +VG YNS+ +KKARLHSTLTALLDDPILADVPK+PTLSDVDTLI+LE+GS
Sbjct: 3 SSGGGKREEEDVGSYNSNNVKKARLHSTLTALLDDPILADVPKEPTLSDVDTLINLELGS 62
Query: 65 AMRISILKLDGTSF--AVMNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLS 122
AMRIS++KLD TSF AV+NSATVKDLKLAIKKK+NDMEQS +GHRHISWKHVWAN+CLS
Sbjct: 63 AMRISVIKLDSTSFDVAVLNSATVKDLKLAIKKKINDMEQSKMGHRHISWKHVWANFCLS 122
Query: 123 HQNQKLLDENSALQDCGVRNNSQVQFVPFVLSKGSGKHSKRRKHRIFRGLSK 174
+ N KL+++ SALQD G+ NNSQV FVPF++SKGS +HS+RRKHR F GL+K
Sbjct: 123 YYNDKLINDGSALQDFGIHNNSQVHFVPFIMSKGSQRHSRRRKHRFFHGLNK 174
>gi|224065725|ref|XP_002301940.1| predicted protein [Populus trichocarpa]
gi|222843666|gb|EEE81213.1| predicted protein [Populus trichocarpa]
Length = 173
Score = 262 bits (669), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 132/178 (74%), Positives = 150/178 (84%), Gaps = 7/178 (3%)
Query: 1 MESSSSCGAKEEEVEVGDYNSSTMKKARLHSTLTALLDDPILADVPKKPTLSDVDTLISL 60
MESSS + E EVG YNSS +KKA+L STL ALLDDPIL+DVPKKPTLSDVDTLISL
Sbjct: 1 MESSS-----KGEDEVGGYNSSNVKKAKLQSTLAALLDDPILSDVPKKPTLSDVDTLISL 55
Query: 61 EMGSAMRISILKLDGTSF--AVMNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWAN 118
EMGSAMRIS+ KLDGTSF A+MNSATVKDLKLAIK+K+ +MEQS +GHRHISWK VWAN
Sbjct: 56 EMGSAMRISVQKLDGTSFDVALMNSATVKDLKLAIKRKLIEMEQSKMGHRHISWKKVWAN 115
Query: 119 YCLSHQNQKLLDENSALQDCGVRNNSQVQFVPFVLSKGSGKHSKRRKHRIFRGLSKLA 176
+ LS+ NQKLLD+NSALQD G+RNNSQV F +V+SK S +HSKRRKHR F GL+K A
Sbjct: 116 FALSYHNQKLLDDNSALQDSGIRNNSQVHFASYVMSKDSQRHSKRRKHRFFHGLNKRA 173
>gi|449455569|ref|XP_004145525.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Cucumis sativus]
Length = 181
Score = 255 bits (651), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 123/169 (72%), Positives = 147/169 (86%), Gaps = 3/169 (1%)
Query: 10 KEEEVEVGDYNSSTMKKARLHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRIS 69
K+EE VG Y+S+ +KK RL+STL ALLDDPILADVPK PTLS VDTLISLE+GSAMRIS
Sbjct: 14 KDEENAVG-YHSNNVKKVRLNSTLAALLDDPILADVPKNPTLSHVDTLISLELGSAMRIS 72
Query: 70 ILKLDGTSF--AVMNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQK 127
+LKLDGT+ +MNSAT+KDLKLAIKKKVN+MEQS +GHRHISWKHVWAN+CL+H N+K
Sbjct: 73 VLKLDGTAIDVVIMNSATLKDLKLAIKKKVNEMEQSKMGHRHISWKHVWANFCLAHLNEK 132
Query: 128 LLDENSALQDCGVRNNSQVQFVPFVLSKGSGKHSKRRKHRIFRGLSKLA 176
LLD++S LQD G+RNNSQV+F+P+V+SK S HS+RRKHR F GL+K A
Sbjct: 133 LLDDSSVLQDFGIRNNSQVRFIPYVMSKSSRTHSRRRKHRFFHGLNKCA 181
>gi|307136304|gb|ADN34128.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 181
Score = 250 bits (639), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 121/170 (71%), Positives = 147/170 (86%), Gaps = 3/170 (1%)
Query: 9 AKEEEVEVGDYNSSTMKKARLHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRI 68
+K+EE VG Y+S+ +KK RL+STL ALLDDPILADVPK PTLS VDTLISLE+GSAMRI
Sbjct: 13 SKDEENVVG-YHSNNVKKVRLNSTLAALLDDPILADVPKNPTLSHVDTLISLELGSAMRI 71
Query: 69 SILKLDGTSFAV--MNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQ 126
S+LKLDGT+ V MNSAT+KDLKLAIK+KVN+ EQS +GHRHISWKHVWAN+CL+H N+
Sbjct: 72 SVLKLDGTAIDVLIMNSATLKDLKLAIKQKVNETEQSKMGHRHISWKHVWANFCLAHHNE 131
Query: 127 KLLDENSALQDCGVRNNSQVQFVPFVLSKGSGKHSKRRKHRIFRGLSKLA 176
K+LD++S LQD G+RNNSQV+F+P+V+SK S HS+RRKHR F GL+K A
Sbjct: 132 KILDDSSVLQDFGIRNNSQVRFIPYVMSKNSRTHSRRRKHRFFHGLNKCA 181
>gi|449519748|ref|XP_004166896.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Cucumis sativus]
Length = 209
Score = 244 bits (624), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 115/154 (74%), Positives = 136/154 (88%), Gaps = 2/154 (1%)
Query: 25 KKARLHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDGTSF--AVMN 82
KK RL+STL ALLDDPILADVPK PTLS VDTLISLE+GSAMRIS+LKLDGT+ +MN
Sbjct: 56 KKVRLNSTLAALLDDPILADVPKNPTLSHVDTLISLELGSAMRISVLKLDGTAIDVVIMN 115
Query: 83 SATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRN 142
SAT+KDLKLAIKKKVN+MEQS +GHRHISWKHVWAN+CL+H N+KLLD++S LQD G+RN
Sbjct: 116 SATLKDLKLAIKKKVNEMEQSKMGHRHISWKHVWANFCLAHLNEKLLDDSSVLQDFGIRN 175
Query: 143 NSQVQFVPFVLSKGSGKHSKRRKHRIFRGLSKLA 176
NSQ++F+P+V+SK S HS+RRKHR F GL+K A
Sbjct: 176 NSQIRFIPYVMSKSSRTHSRRRKHRFFHGLNKCA 209
>gi|388501190|gb|AFK38661.1| unknown [Lotus japonicus]
Length = 163
Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 115/163 (70%), Positives = 133/163 (81%), Gaps = 2/163 (1%)
Query: 16 VGDYNSSTMKKARLHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG 75
+G+Y KKAR+ S L ALLDDPIL+DVPK PTL DVDTLI LE+GSAMRISI+KLD
Sbjct: 1 MGEYEERRDKKARVQSMLKALLDDPILSDVPKNPTLYDVDTLIGLELGSAMRISIIKLDA 60
Query: 76 TSF--AVMNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENS 133
TSF VMNSATVKDLKLAIKKKVNDMEQSN+GHR ISW+ VWA CLS+ N KLL+++
Sbjct: 61 TSFDVTVMNSATVKDLKLAIKKKVNDMEQSNMGHRQISWRGVWAKCCLSYNNHKLLNDDD 120
Query: 134 ALQDCGVRNNSQVQFVPFVLSKGSGKHSKRRKHRIFRGLSKLA 176
ALQ+ GVRNNSQV FVP+V++K S HS RRKHR F GL+KL+
Sbjct: 121 ALQNFGVRNNSQVHFVPYVMTKESRSHSTRRKHRFFHGLNKLS 163
>gi|356541000|ref|XP_003538972.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Glycine max]
Length = 187
Score = 233 bits (593), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 123/170 (72%), Positives = 144/170 (84%), Gaps = 2/170 (1%)
Query: 7 CGAKEEEVEVGDYNSSTMKKARLHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAM 66
C K + + +YN S++KKARL+S LT LLDDPIL+DVPK PT +DVDTLI+LE+GSAM
Sbjct: 16 CFGKLGSINMEEYNKSSVKKARLNSLLTTLLDDPILSDVPKNPTFADVDTLINLELGSAM 75
Query: 67 RISILKLDGTSF--AVMNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQ 124
RIS+LKLDGT+ VMNSATVKDLKLAIKKKVNDMEQS++GHRHISWKHVWANYCLS
Sbjct: 76 RISVLKLDGTTLDVIVMNSATVKDLKLAIKKKVNDMEQSSMGHRHISWKHVWANYCLSCH 135
Query: 125 NQKLLDENSALQDCGVRNNSQVQFVPFVLSKGSGKHSKRRKHRIFRGLSK 174
N KLLD+N ALQ+ GVRNNSQVQFV +V++K S +HSKRRKHR F GL+K
Sbjct: 136 NNKLLDDNEALQNFGVRNNSQVQFVSYVMTKESRRHSKRRKHRFFHGLNK 185
>gi|356538591|ref|XP_003537786.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like isoform 2 [Glycine max]
Length = 190
Score = 232 bits (592), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 123/170 (72%), Positives = 144/170 (84%), Gaps = 2/170 (1%)
Query: 7 CGAKEEEVEVGDYNSSTMKKARLHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAM 66
C K + + +YN S++KKARL+S LT LLDDPIL+DVPK PT +DVDTLI+LE+GSAM
Sbjct: 19 CFGKLGSINMEEYNKSSVKKARLNSLLTTLLDDPILSDVPKNPTFADVDTLINLELGSAM 78
Query: 67 RISILKLDGTSF--AVMNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQ 124
RIS+LKLDGT+ VMNSATVKDLKLAIKKKVNDMEQS++GHRHISWKHVWANYCLS
Sbjct: 79 RISVLKLDGTTLDVIVMNSATVKDLKLAIKKKVNDMEQSSMGHRHISWKHVWANYCLSCH 138
Query: 125 NQKLLDENSALQDCGVRNNSQVQFVPFVLSKGSGKHSKRRKHRIFRGLSK 174
N KLLD+N ALQ+ GVRNNSQVQFV +V++K S +HSKRRKHR F GL+K
Sbjct: 139 NNKLLDDNEALQNFGVRNNSQVQFVSYVMTKESRRHSKRRKHRFFHGLNK 188
>gi|356538589|ref|XP_003537785.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like isoform 1 [Glycine max]
Length = 163
Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 121/159 (76%), Positives = 140/159 (88%), Gaps = 2/159 (1%)
Query: 18 DYNSSTMKKARLHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDGTS 77
+YN S++KKARL+S LT LLDDPIL+DVPK PT +DVDTLI+LE+GSAMRIS+LKLDGT+
Sbjct: 3 EYNKSSVKKARLNSLLTTLLDDPILSDVPKNPTFADVDTLINLELGSAMRISVLKLDGTT 62
Query: 78 F--AVMNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSAL 135
VMNSATVKDLKLAIKKKVNDMEQS++GHRHISWKHVWANYCLS N KLLD+N AL
Sbjct: 63 LDVIVMNSATVKDLKLAIKKKVNDMEQSSMGHRHISWKHVWANYCLSCHNNKLLDDNEAL 122
Query: 136 QDCGVRNNSQVQFVPFVLSKGSGKHSKRRKHRIFRGLSK 174
Q+ GVRNNSQVQFV +V++K S +HSKRRKHR F GL+K
Sbjct: 123 QNFGVRNNSQVQFVSYVMTKESRRHSKRRKHRFFHGLNK 161
>gi|255638264|gb|ACU19445.1| unknown [Glycine max]
Length = 190
Score = 228 bits (580), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 120/170 (70%), Positives = 140/170 (82%), Gaps = 2/170 (1%)
Query: 7 CGAKEEEVEVGDYNSSTMKKARLHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAM 66
C K + + +YN S++KKARL+S LT LLDDPIL DVPK PT +DVDT I+LE+GSAM
Sbjct: 19 CFGKLGSINMEEYNKSSVKKARLNSLLTTLLDDPILFDVPKNPTFADVDTFINLELGSAM 78
Query: 67 RISILKLDGTSF--AVMNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQ 124
RIS+LKLDGT+ VMNSATVKDLKLAIKKKVNDMEQS++GHRHISWKHVWANYCLS
Sbjct: 79 RISVLKLDGTTLDVIVMNSATVKDLKLAIKKKVNDMEQSSMGHRHISWKHVWANYCLSCH 138
Query: 125 NQKLLDENSALQDCGVRNNSQVQFVPFVLSKGSGKHSKRRKHRIFRGLSK 174
N KLLD+N ALQ+ GVRNN QVQFV +V++K +HSKRRKHR F GL+K
Sbjct: 139 NNKLLDDNEALQNFGVRNNFQVQFVSYVMTKEFRRHSKRRKHRFFHGLNK 188
>gi|388495574|gb|AFK35853.1| unknown [Lotus japonicus]
Length = 162
Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 113/163 (69%), Positives = 131/163 (80%), Gaps = 3/163 (1%)
Query: 16 VGDYNSSTMKKARLHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG 75
+G+Y KKA + S L ALLDDPIL+DVPK PTL DVD LI LE+GSAMRISI+KLD
Sbjct: 1 MGEYEERRDKKAGVQSMLKALLDDPILSDVPKNPTLYDVDILIGLELGSAMRISIIKLDA 60
Query: 76 TSF--AVMNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENS 133
TSF VMNSATVKDLKLAIKKKVNDMEQSN+GHR ISW+ VWA CLS+ N KLL+++
Sbjct: 61 TSFDVTVMNSATVKDLKLAIKKKVNDMEQSNMGHRQISWRGVWAKCCLSYNNHKLLNDD- 119
Query: 134 ALQDCGVRNNSQVQFVPFVLSKGSGKHSKRRKHRIFRGLSKLA 176
ALQ+ GVRNNSQV FVP+V++K S HS RRKHR F GL+KL+
Sbjct: 120 ALQNFGVRNNSQVHFVPYVMAKESRSHSTRRKHRFFHGLNKLS 162
>gi|30680468|ref|NP_187443.2| U11/U12 small nuclear ribonucleoprotein [Arabidopsis thaliana]
gi|27754393|gb|AAO22645.1| unknown protein [Arabidopsis thaliana]
gi|48310596|gb|AAT41846.1| At3g07860 [Arabidopsis thaliana]
gi|332641091|gb|AEE74612.1| U11/U12 small nuclear ribonucleoprotein [Arabidopsis thaliana]
Length = 165
Score = 215 bits (547), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 111/163 (68%), Positives = 138/163 (84%), Gaps = 3/163 (1%)
Query: 14 VEVGDYNSSTMKKARLHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKL 73
+E GDY+ T K+ +L S L+ LL DPILADVP+ PTLSDV TL+SLE GSAMR+S++KL
Sbjct: 1 MESGDYDVET-KREKLKSVLSQLLADPILADVPRNPTLSDVVTLVSLEKGSAMRLSVVKL 59
Query: 74 DGTSF--AVMNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDE 131
DG+S AVMNSAT+KDLKL IKKKVN+MEQ+N+GHRHISWKHVW+N+CLS N+KLLD+
Sbjct: 60 DGSSLDVAVMNSATLKDLKLLIKKKVNEMEQANMGHRHISWKHVWSNFCLSCNNEKLLDD 119
Query: 132 NSALQDCGVRNNSQVQFVPFVLSKGSGKHSKRRKHRIFRGLSK 174
N+ LQD G+RNNSQV F+P+V+ KG G+HSKR+KHR+FR L K
Sbjct: 120 NAVLQDVGIRNNSQVTFMPYVMKKGRGRHSKRKKHRLFRSLHK 162
>gi|242074686|ref|XP_002447279.1| hypothetical protein SORBIDRAFT_06g031870 [Sorghum bicolor]
gi|241938462|gb|EES11607.1| hypothetical protein SORBIDRAFT_06g031870 [Sorghum bicolor]
Length = 183
Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 116/182 (63%), Positives = 144/182 (79%), Gaps = 9/182 (4%)
Query: 1 MESSSSC------GAKEEEVEVGDYNSSTMKKARLHSTLTALLDDPILADVPKKPTLSDV 54
MES S+ G+ + EV V Y S K+ARL S L ALLDDPILADVP+KP+L+DV
Sbjct: 1 MESFSTAAGAMDSGSGKPEV-VAAYQSKEAKQARLQSMLAALLDDPILADVPRKPSLADV 59
Query: 55 DTLISLEMGSAMRISILKLDGTSF--AVMNSATVKDLKLAIKKKVNDMEQSNLGHRHISW 112
DTLI+LE+GSAMR+S++KLD TSF AV+NSATVKDLKLAI+KK+N++EQ +GHRHISW
Sbjct: 60 DTLINLELGSAMRLSVVKLDNTSFEVAVLNSATVKDLKLAIRKKINEIEQEQMGHRHISW 119
Query: 113 KHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQFVPFVLSKGSGKHSKRRKHRIFRGL 172
KHVW NYCL+H N+KL+++NSAL GVRNNS+V F P V+S+ KHS+RRKHR F GL
Sbjct: 120 KHVWDNYCLTHHNEKLINDNSALSAYGVRNNSKVCFSPHVMSRVHRKHSRRRKHRFFHGL 179
Query: 173 SK 174
S+
Sbjct: 180 SR 181
>gi|297829342|ref|XP_002882553.1| hypothetical protein ARALYDRAFT_478124 [Arabidopsis lyrata subsp.
lyrata]
gi|297328393|gb|EFH58812.1| hypothetical protein ARALYDRAFT_478124 [Arabidopsis lyrata subsp.
lyrata]
Length = 165
Score = 211 bits (537), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 110/163 (67%), Positives = 137/163 (84%), Gaps = 3/163 (1%)
Query: 14 VEVGDYNSSTMKKARLHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKL 73
+E GDY+ T K+ +L S L+ LL DPILADVP+ PTLSDV TL+SLE GSAMR+S++KL
Sbjct: 1 MESGDYDVET-KREKLKSVLSHLLADPILADVPRNPTLSDVVTLVSLEKGSAMRLSVVKL 59
Query: 74 DGTSF--AVMNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDE 131
DG+S AVMNSAT+KDLKL IKKKVN+ EQ+N+GHRHISWKHVW+N+CLS N+KLLD+
Sbjct: 60 DGSSLDVAVMNSATLKDLKLLIKKKVNETEQANMGHRHISWKHVWSNFCLSCNNEKLLDD 119
Query: 132 NSALQDCGVRNNSQVQFVPFVLSKGSGKHSKRRKHRIFRGLSK 174
N+ LQD G+RNNSQV F+P+V+ KG G+HSKR+KHR+FR L K
Sbjct: 120 NALLQDVGIRNNSQVTFMPYVMKKGRGRHSKRKKHRLFRSLHK 162
>gi|116309855|emb|CAH66890.1| OSIGBa0099L20.5 [Oryza sativa Indica Group]
gi|218195764|gb|EEC78191.1| hypothetical protein OsI_17798 [Oryza sativa Indica Group]
Length = 187
Score = 209 bits (531), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 141/175 (80%), Gaps = 4/175 (2%)
Query: 2 ESSSSCGAKEEEVEVGDYNSSTMKKARLHSTLTALLDDPILADVPKKPTLSDVDTLISLE 61
E++ S K EEV Y SS K+A+L S L ALLDDPILADVP+KP+L+DVDTLI+LE
Sbjct: 13 EATDSVSTKPEEVAA--YQSSEAKQAKLQSMLAALLDDPILADVPRKPSLADVDTLINLE 70
Query: 62 MGSAMRISILKLDGTSF--AVMNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANY 119
+GSAMR++++KLDGTSF A++N+ATVKDLK+AI+KK +++EQ +GHRHISWKH+W NY
Sbjct: 71 LGSAMRLTVVKLDGTSFDVAMLNTATVKDLKMAIRKKTDEIEQEKMGHRHISWKHIWDNY 130
Query: 120 CLSHQNQKLLDENSALQDCGVRNNSQVQFVPFVLSKGSGKHSKRRKHRIFRGLSK 174
CL+HQN+KL+D+NS L G+ NNS+V F P V+S+ KHS+RRKHR F GL++
Sbjct: 131 CLTHQNEKLIDDNSVLSSNGICNNSKVYFSPHVMSRVYRKHSRRRKHRFFHGLNR 185
>gi|38346077|emb|CAE04845.2| OSJNBa0084K01.17 [Oryza sativa Japonica Group]
gi|222629718|gb|EEE61850.1| hypothetical protein OsJ_16518 [Oryza sativa Japonica Group]
Length = 187
Score = 208 bits (529), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 140/175 (80%), Gaps = 4/175 (2%)
Query: 2 ESSSSCGAKEEEVEVGDYNSSTMKKARLHSTLTALLDDPILADVPKKPTLSDVDTLISLE 61
E++ S K EEV Y SS K+A+L S L ALLDDPILADVP+KP+L+DVDTLI+LE
Sbjct: 13 EATDSVSTKPEEVAA--YQSSEAKQAKLQSMLAALLDDPILADVPRKPSLADVDTLINLE 70
Query: 62 MGSAMRISILKLDGTSF--AVMNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANY 119
+GSAMR++++KLDGTSF A++N+ATVKDLK+AI+KK +++EQ +GHRHISWKH+W NY
Sbjct: 71 LGSAMRLTVVKLDGTSFDVAMLNTATVKDLKMAIRKKTDEIEQEKMGHRHISWKHIWDNY 130
Query: 120 CLSHQNQKLLDENSALQDCGVRNNSQVQFVPFVLSKGSGKHSKRRKHRIFRGLSK 174
CL+HQN+KL+D+NS L G+ NNS+V F P V+S+ KHS+RRKHR F GL +
Sbjct: 131 CLTHQNEKLIDDNSVLSSNGICNNSKVYFSPHVMSRVYRKHSRRRKHRFFHGLHR 185
>gi|414584945|tpg|DAA35516.1| TPA: hypothetical protein ZEAMMB73_975050 [Zea mays]
Length = 177
Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 108/164 (65%), Positives = 134/164 (81%), Gaps = 2/164 (1%)
Query: 15 EVGDYNSSTMKKARLHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLD 74
EV Y S K+ARL S L ALLDDPILADV +KP+L+DVDTLI+LE+GSAMR++++KLD
Sbjct: 10 EVAAYQSKEAKQARLQSMLAALLDDPILADVTRKPSLADVDTLINLELGSAMRLTVVKLD 69
Query: 75 GTSF--AVMNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDEN 132
TSF AV+NSATVKDLKLAI+KK+N++EQ +GHRHISWKHVW NYCL+H N+KL+++N
Sbjct: 70 NTSFDVAVLNSATVKDLKLAIRKKINEIEQEKMGHRHISWKHVWDNYCLTHHNEKLIEDN 129
Query: 133 SALQDCGVRNNSQVQFVPFVLSKGSGKHSKRRKHRIFRGLSKLA 176
S L GVRNNS+V F P V+S+ KHS+RRKHR F GLS+ A
Sbjct: 130 STLSSYGVRNNSKVCFSPHVMSRVHRKHSRRRKHRFFHGLSRKA 173
>gi|6648198|gb|AAF21196.1|AC013483_20 unknown protein [Arabidopsis thaliana]
Length = 232
Score = 207 bits (526), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 110/165 (66%), Positives = 139/165 (84%), Gaps = 4/165 (2%)
Query: 14 VEVGDYNSSTMKKARLHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKL 73
+E GDY+ T K+ +L S L+ LL DPILADVP+ PTLSDV TL+SLE GSAMR+S++KL
Sbjct: 1 MESGDYDVET-KREKLKSVLSQLLADPILADVPRNPTLSDVVTLVSLEKGSAMRLSVVKL 59
Query: 74 DGTSF--AVMNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDE 131
DG+S AVMNSAT+KDLKL IKKKVN+MEQ+N+GHRHISWKHVW+N+CLS N+KLLD+
Sbjct: 60 DGSSLDVAVMNSATLKDLKLLIKKKVNEMEQANMGHRHISWKHVWSNFCLSCNNEKLLDD 119
Query: 132 NSALQDCGVRNNSQVQFVPFVLSKGSGKHSKRRKHRIFRGLSKLA 176
N+ LQD G+RNNSQV F+P+V+ KG G+HSKR+KHR + G S+L+
Sbjct: 120 NAVLQDVGIRNNSQVTFMPYVMKKGRGRHSKRKKHR-WSGQSRLS 163
>gi|357473839|ref|XP_003607204.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Medicago
truncatula]
gi|355508259|gb|AES89401.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Medicago
truncatula]
Length = 162
Score = 201 bits (511), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 111/164 (67%), Positives = 135/164 (82%), Gaps = 6/164 (3%)
Query: 15 EVGDYNSSTMKKARLHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLD 74
E +Y S +KKA++ L ALL+DPILADVPK PTL DV+TLI LE+GSAMRI++LKLD
Sbjct: 3 EGAEYKSG-LKKAKV---LKALLEDPILADVPKNPTLEDVETLIGLELGSAMRITVLKLD 58
Query: 75 GTSFAV--MNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDEN 132
TSF V MN+AT+KDLKLAIKKKVN MEQS++GHRHISW+ VWANYCLS N KLL+++
Sbjct: 59 TTSFDVILMNTATLKDLKLAIKKKVNYMEQSSMGHRHISWRSVWANYCLSFDNNKLLNDD 118
Query: 133 SALQDCGVRNNSQVQFVPFVLSKGSGKHSKRRKHRIFRGLSKLA 176
LQ+ GVRNNSQ+ FVP+V++K S +HSKRRKHR F GLSKL+
Sbjct: 119 DVLQNLGVRNNSQIHFVPYVMTKESRRHSKRRKHRFFHGLSKLS 162
>gi|357117689|ref|XP_003560596.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Brachypodium distachyon]
Length = 150
Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 92/140 (65%), Positives = 116/140 (82%), Gaps = 4/140 (2%)
Query: 15 EVGDYNSSTMKKARLHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLD 74
EV Y SS K+A+L S L ALLDDPILADVP+KP+L DVDTLI+LE+GSAMR+ ++KLD
Sbjct: 11 EVAAYQSSEAKQAKLQSMLAALLDDPILADVPRKPSLGDVDTLINLELGSAMRVIVVKLD 70
Query: 75 GTSF--AVMNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDEN 132
TSF V+N+ATVKDLKLAIKKK++++EQ +G+RHISWK++W NYCL++QN+KL D+N
Sbjct: 71 DTSFDVPVLNTATVKDLKLAIKKKISEIEQGQMGYRHISWKYIWENYCLTYQNEKLTDDN 130
Query: 133 SALQDCGVRNNSQVQFVPFV 152
SAL GVRNNS+V VP V
Sbjct: 131 SALSSHGVRNNSKV--VPSV 148
>gi|357477471|ref|XP_003609021.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Medicago
truncatula]
gi|355510076|gb|AES91218.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Medicago
truncatula]
Length = 441
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/143 (65%), Positives = 113/143 (79%), Gaps = 7/143 (4%)
Query: 15 EVGDYNSSTMKKARLHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLD 74
E +Y S +KKA++ L ALL+DPILADVPK PTL DV+TLI LE+GSAMRI++LKLD
Sbjct: 272 EGAEYKSG-LKKAKV---LKALLEDPILADVPKNPTLEDVETLIGLELGSAMRITVLKLD 327
Query: 75 GTSFAV--MNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDEN 132
TSF V MN+AT+KDLKLAIKKKVN MEQS++GHRHISW+ VWANYCLS N KLL+++
Sbjct: 328 TTSFDVILMNTATLKDLKLAIKKKVNYMEQSSMGHRHISWRSVWANYCLSFDNNKLLNDD 387
Query: 133 SALQDCGVRNNSQVQ-FVPFVLS 154
LQ+ GVRNNSQ F P L+
Sbjct: 388 DVLQNLGVRNNSQTDWFTPEFLN 410
>gi|284444059|gb|ADB85768.1| hypothetical protein [Wolffia arrhiza]
Length = 164
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 81/133 (60%), Positives = 111/133 (83%), Gaps = 2/133 (1%)
Query: 25 KKARLHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDGTSFAVM--N 82
K+A L S + ALL DP+L+DVP +PTLSDVDTL+ E+G AM+IS+LKLDG+SF V+ N
Sbjct: 7 KRAGLESMVKALLSDPLLSDVPARPTLSDVDTLLRFELGGAMKISVLKLDGSSFDVVVSN 66
Query: 83 SATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRN 142
SA+VKDLKLAI+KK+ M++ +GHRHISW+HVWAN+CLSH N+KL++++S+LQ G+ +
Sbjct: 67 SASVKDLKLAIRKKIEAMQEGQMGHRHISWRHVWANFCLSHDNEKLIEDDSSLQKFGIHS 126
Query: 143 NSQVQFVPFVLSK 155
NSQV+FV +V S+
Sbjct: 127 NSQVRFVAYVQSR 139
>gi|357473841|ref|XP_003607205.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Medicago
truncatula]
gi|355508260|gb|AES89402.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Medicago
truncatula]
Length = 146
Score = 179 bits (453), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 90/127 (70%), Positives = 107/127 (84%), Gaps = 5/127 (3%)
Query: 22 STMKKARLHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDGTSFAV- 80
S +KKA++ L ALL+DPILADVPK PTL DV+TLI LE+GSAMRI++LKLD TSF V
Sbjct: 9 SGLKKAKV---LKALLEDPILADVPKNPTLEDVETLIGLELGSAMRITVLKLDTTSFDVI 65
Query: 81 -MNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCG 139
MN+AT+KDLKLAIKKKVN MEQS++GHRHISW+ VWANYCLS N KLL+++ LQ+ G
Sbjct: 66 LMNTATLKDLKLAIKKKVNYMEQSSMGHRHISWRSVWANYCLSFDNNKLLNDDDVLQNLG 125
Query: 140 VRNNSQV 146
VRNNSQV
Sbjct: 126 VRNNSQV 132
>gi|167999003|ref|XP_001752207.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696602|gb|EDQ82940.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 162
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 77/156 (49%), Positives = 114/156 (73%), Gaps = 2/156 (1%)
Query: 21 SSTMKKARLHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDGTSF-- 78
+ ++++ ++ LLDDPILADVPK T++D+DTLI +E+GSAM++SILKLDG+
Sbjct: 6 GTYFRRSQFEPLVSTLLDDPILADVPKNATVADIDTLIGVELGSAMKLSILKLDGSHLEV 65
Query: 79 AVMNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDC 138
AV+N+A V+DLK A+ K V+ EQS+LG RHISW HVW ++CLS+ +KLLD+++ L D
Sbjct: 66 AVLNNAKVRDLKQAVMKYVDFQEQSHLGQRHISWSHVWDHFCLSYGKEKLLDDDARLHDF 125
Query: 139 GVRNNSQVQFVPFVLSKGSGKHSKRRKHRIFRGLSK 174
G+R N +++F V ++ G+HS+ +K R F GL K
Sbjct: 126 GIRKNDELRFEHHVATREEGRHSRAKKRRFFHGLRK 161
>gi|297603512|ref|NP_001054165.2| Os04g0663500 [Oryza sativa Japonica Group]
gi|255675856|dbj|BAF16079.2| Os04g0663500 [Oryza sativa Japonica Group]
Length = 155
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/115 (61%), Positives = 93/115 (80%), Gaps = 6/115 (5%)
Query: 2 ESSSSCGAKEEEVEVGDYNSSTMKKARLHSTLTALLDDPILADVPKKPTLSDVDTLISLE 61
E++ S K EEV Y SS K+A+L S L ALLDDPILADVP+KP+L+DVDTLI+LE
Sbjct: 13 EATDSVSTKPEEVAA--YQSSEAKQAKLQSMLAALLDDPILADVPRKPSLADVDTLINLE 70
Query: 62 MGSAMRISILKLDGTSF----AVMNSATVKDLKLAIKKKVNDMEQSNLGHRHISW 112
+GSAMR++++KLDGTSF A++N+ATVKDLK+AI+KK +++EQ +GHRHISW
Sbjct: 71 LGSAMRLTVVKLDGTSFGTDVAMLNTATVKDLKMAIRKKTDEIEQEKMGHRHISW 125
>gi|357473837|ref|XP_003607203.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Medicago
truncatula]
gi|355508258|gb|AES89400.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Medicago
truncatula]
Length = 104
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/100 (70%), Positives = 83/100 (83%), Gaps = 6/100 (6%)
Query: 15 EVGDYNSSTMKKARLHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLD 74
E +Y S +KKA++ L ALL+DPILADVPK PTL DV+TLI LE+GSAMRI++LKLD
Sbjct: 3 EGAEYKSG-LKKAKV---LKALLEDPILADVPKNPTLEDVETLIGLELGSAMRITVLKLD 58
Query: 75 GTSFAV--MNSATVKDLKLAIKKKVNDMEQSNLGHRHISW 112
TSF V MN+AT+KDLKLAIKKKVN MEQS++GHRHISW
Sbjct: 59 TTSFDVILMNTATLKDLKLAIKKKVNYMEQSSMGHRHISW 98
>gi|168056786|ref|XP_001780399.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668159|gb|EDQ54772.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 166
Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 98/156 (62%), Gaps = 2/156 (1%)
Query: 21 SSTMKKARLHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDGTSFAV 80
+ ++++ ++ L + L VPK T+ DTLI +++GSA+R+SILKLDG F V
Sbjct: 10 GTYFRRSQFEPLVSTLPYEHSLDHVPKNETVVGTDTLIGVKLGSAIRLSILKLDGIHFEV 69
Query: 81 M--NSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDC 138
N+ V+DLK +I V+ EQS LGHRHISWKHVW N+CLS +KL+D+++ L D
Sbjct: 70 TVPNNGKVRDLKQSIMMYVDSDEQSQLGHRHISWKHVWNNFCLSFGKEKLVDDDARLHDF 129
Query: 139 GVRNNSQVQFVPFVLSKGSGKHSKRRKHRIFRGLSK 174
G+RNN +++F V ++ +H + K R F G K
Sbjct: 130 GIRNNDELRFEHHVAAREEFRHPRVMKPRFFYGPHK 165
>gi|149392044|gb|ABR25901.1| conserved hypothetical protein [Oryza sativa Indica Group]
Length = 95
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 56/93 (60%), Positives = 78/93 (83%), Gaps = 2/93 (2%)
Query: 65 AMRISILKLDGTSF--AVMNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLS 122
AMR++++KLDGTSF A++N+ATVKDLK+AI+KK +++E +GHRHISWKH+W NYCL+
Sbjct: 1 AMRLTVVKLDGTSFDVAMLNTATVKDLKMAIRKKTDEIEPEKMGHRHISWKHIWDNYCLT 60
Query: 123 HQNQKLLDENSALQDCGVRNNSQVQFVPFVLSK 155
HQN+KL+D+NS L G+ NNS+V F P V+S+
Sbjct: 61 HQNEKLIDDNSVLSSNGICNNSKVYFSPHVMSR 93
>gi|168033033|ref|XP_001769021.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679655|gb|EDQ66099.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 175
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 106/163 (65%), Gaps = 7/163 (4%)
Query: 14 VEVGDYNSSTMKKARLHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKL 73
V GD + K+++ +++ +DP V T++ VD+LI +E+G++M++SILKL
Sbjct: 5 VRRGDMGT-YFKRSQFKPLVSSFREDP----VGTAGTVAKVDSLIGVELGTSMKLSILKL 59
Query: 74 DGTSF--AVMNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDE 131
DG+ F V+ ++ V+DLK A+ K V+ +EQS LGH+ ISW+HVW ++CL H +KL+D+
Sbjct: 60 DGSHFDVVVLTNSRVRDLKQAVVKYVDHLEQSELGHKRISWQHVWGHFCLCHGTEKLVDD 119
Query: 132 NSALQDCGVRNNSQVQFVPFVLSKGSGKHSKRRKHRIFRGLSK 174
++ L G+RNN Q++F V + G++ + +K R F GL K
Sbjct: 120 DARLAGFGIRNNDQLRFEHHVSLRDEGQYLRAKKRRFFHGLIK 162
>gi|355721010|gb|AES07123.1| small nuclear ribonucleoprotein 25kDa [Mustela putorius furo]
Length = 157
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 74/123 (60%), Gaps = 2/123 (1%)
Query: 29 LHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATV 86
L ++ DP+L D+P + TL +V++ I+LE G AM + + K+DG V+ +ATV
Sbjct: 30 FQEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEIMPVVVVQNATV 89
Query: 87 KDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQV 146
DLK AI++ V ++ G +HISW +VW Y L+ +KL D+ L+D G+RN +V
Sbjct: 90 LDLKKAIQRYVQLRQEREGGIQHISWSYVWRTYYLTSAGEKLTDDRKKLRDYGIRNRDEV 149
Query: 147 QFV 149
F+
Sbjct: 150 SFI 152
>gi|390471020|ref|XP_003734415.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Callithrix jacchus]
Length = 182
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 74/123 (60%), Gaps = 2/123 (1%)
Query: 29 LHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATV 86
L ++ DP+L D+P + TL +V++ I+LE G AM + + K+DG V+ SATV
Sbjct: 54 FQEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQSATV 113
Query: 87 KDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQV 146
DLK AI++ V ++ G +HISW +VW Y L+ +KL ++ L+D G+RN +V
Sbjct: 114 LDLKKAIQRYVQLKQEREGGIQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEV 173
Query: 147 QFV 149
F+
Sbjct: 174 SFI 176
>gi|410985647|ref|XP_003999130.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
[Felis catus]
Length = 180
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 74/123 (60%), Gaps = 2/123 (1%)
Query: 29 LHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATV 86
L ++ DP+L D+P + TL +V++ I+LE G AM + + K+DG V+ +ATV
Sbjct: 52 FQEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEIMPVVVVQNATV 111
Query: 87 KDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQV 146
DLK AI++ V ++ G +HISW +VW Y L+ +KL ++ L+D G+RN +V
Sbjct: 112 LDLKKAIQRYVQLRQEREGGIQHISWSYVWRTYYLTSAGEKLTEDRKKLRDYGIRNRDEV 171
Query: 147 QFV 149
F+
Sbjct: 172 SFI 174
>gi|355756392|gb|EHH60000.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Macaca
fascicularis]
Length = 132
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 74/123 (60%), Gaps = 2/123 (1%)
Query: 29 LHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATV 86
L ++ DP+L D+P + TL +V++ I+LE G AM + + K+DG V+ SATV
Sbjct: 4 FQEGLAMVVQDPLLGDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQSATV 63
Query: 87 KDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQV 146
DLK AI++ V ++ G +HISW +VW Y L+ +KL ++ L+D G+RN +V
Sbjct: 64 LDLKKAIQRYVQLKQEREGGIQHISWSYVWRTYHLTSAGEKLTEDKKKLRDYGIRNRDEV 123
Query: 147 QFV 149
F+
Sbjct: 124 SFI 126
>gi|148691819|gb|EDL23766.1| RIKEN cDNA 3300001G02, isoform CRA_c [Mus musculus]
Length = 123
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 75/116 (64%), Gaps = 2/116 (1%)
Query: 36 LLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATVKDLKLAI 93
++ DP+L D+P + TL +V++ I+LE G AM + + K+DG T+ V+ +ATV DLK AI
Sbjct: 2 VVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVTAVVVVQNATVLDLKKAI 61
Query: 94 KKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQFV 149
++ V ++ G +HISW +VW Y L+ +KL ++ L+D G+RN +V F+
Sbjct: 62 QRYVQLKQEREGGVQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEVSFI 117
>gi|13443018|ref|NP_078847.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Homo
sapiens]
gi|114660086|ref|XP_523242.2| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
isoform 3 [Pan troglodytes]
gi|395747207|ref|XP_003778569.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
isoform 1 [Pongo abelii]
gi|395747209|ref|XP_003778570.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
isoform 2 [Pongo abelii]
gi|397476070|ref|XP_003809434.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
[Pan paniscus]
gi|426380497|ref|XP_004056899.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Gorilla gorilla gorilla]
gi|426380503|ref|XP_004056902.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like isoform 1 [Gorilla gorilla gorilla]
gi|426380505|ref|XP_004056903.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like isoform 2 [Gorilla gorilla gorilla]
gi|68052377|sp|Q9BV90.1|CP033_HUMAN RecName: Full=U11/U12 small nuclear ribonucleoprotein 25 kDa
protein; Short=U11/U12 snRNP 25 kDa protein;
Short=U11/U12-25K; AltName: Full=Minus-99 protein
gi|14336677|gb|AAK61211.1|AE006462_3 Minus -99 protein [Homo sapiens]
gi|12655063|gb|AAH01381.1| Small nuclear ribonucleoprotein 25kDa (U11/U12) [Homo sapiens]
gi|14327922|gb|AAH09179.1| Small nuclear ribonucleoprotein 25kDa (U11/U12) [Homo sapiens]
gi|90653003|gb|ABD95904.1| U11/U12 snRNP 25 kDa protein [Homo sapiens]
gi|123982628|gb|ABM83055.1| chromosome 16 open reading frame 33 [synthetic construct]
gi|123983044|gb|ABM83263.1| chromosome 16 open reading frame 33 [synthetic construct]
gi|123997293|gb|ABM86248.1| chromosome 16 open reading frame 33 [synthetic construct]
gi|410222032|gb|JAA08235.1| small nuclear ribonucleoprotein 25kDa (U11/U12) [Pan troglodytes]
gi|410248962|gb|JAA12448.1| small nuclear ribonucleoprotein 25kDa (U11/U12) [Pan troglodytes]
gi|410304654|gb|JAA30927.1| small nuclear ribonucleoprotein 25kDa (U11/U12) [Pan troglodytes]
Length = 132
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 74/123 (60%), Gaps = 2/123 (1%)
Query: 29 LHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATV 86
L ++ DP+L D+P + TL +V++ I+LE G AM + + K+DG V+ SATV
Sbjct: 4 FQEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQSATV 63
Query: 87 KDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQV 146
DLK AI++ V ++ G +HISW +VW Y L+ +KL ++ L+D G+RN +V
Sbjct: 64 LDLKKAIQRYVQLKQEREGGIQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEV 123
Query: 147 QFV 149
F+
Sbjct: 124 SFI 126
>gi|10439480|dbj|BAB15505.1| unnamed protein product [Homo sapiens]
Length = 132
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 74/123 (60%), Gaps = 2/123 (1%)
Query: 29 LHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATV 86
L ++ DP+L D+P + TL +V++ I+LE G AM + + K+DG V+ SATV
Sbjct: 4 FQEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQSATV 63
Query: 87 KDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQV 146
DLK AI++ V ++ G +HISW +VW Y L+ +KL ++ L+D G+RN +V
Sbjct: 64 LDLKKAIQRYVQLKQEREGGIQHISWSYVWRTYHLTSAGEKLAEDRKKLRDYGIRNRDEV 123
Query: 147 QFV 149
F+
Sbjct: 124 SFI 126
>gi|281183133|ref|NP_001162284.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Papio
anubis]
gi|160904111|gb|ABX52098.1| chromosome 16 open reading frame 33 (predicted) [Papio anubis]
gi|355709782|gb|EHH31246.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Macaca
mulatta]
gi|380787573|gb|AFE65662.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Macaca
mulatta]
gi|383421593|gb|AFH34010.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Macaca
mulatta]
gi|384949440|gb|AFI38325.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Macaca
mulatta]
Length = 132
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 74/123 (60%), Gaps = 2/123 (1%)
Query: 29 LHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATV 86
L ++ DP+L D+P + TL +V++ I+LE G AM + + K+DG V+ SATV
Sbjct: 4 FQEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQSATV 63
Query: 87 KDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQV 146
DLK AI++ V ++ G +HISW +VW Y L+ +KL ++ L+D G+RN +V
Sbjct: 64 LDLKKAIQRYVQLKQEREGGIQHISWSYVWRTYHLTSAGEKLTEDKKKLRDYGIRNRDEV 123
Query: 147 QFV 149
F+
Sbjct: 124 SFI 126
>gi|119606283|gb|EAW85877.1| chromosome 16 open reading frame 33, isoform CRA_a [Homo sapiens]
Length = 267
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 74/119 (62%), Gaps = 2/119 (1%)
Query: 33 LTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATVKDLK 90
L ++ DP+L D+P + TL +V++ I+LE G AM + + K+DG V+ SATV DLK
Sbjct: 143 LAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQSATVLDLK 202
Query: 91 LAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQFV 149
AI++ V ++ G +HISW +VW Y L+ +KL ++ L+D G+RN +V F+
Sbjct: 203 KAIQRYVQLKQEREGGIQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEVSFI 261
>gi|73959877|ref|XP_854401.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
[Canis lupus familiaris]
Length = 213
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 74/123 (60%), Gaps = 2/123 (1%)
Query: 29 LHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATV 86
L ++ DP+L D+P + TL +V++ I+LE G AM + + K+DG V+ +ATV
Sbjct: 85 FQEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEIMPVVVVQNATV 144
Query: 87 KDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQV 146
DLK AI++ V ++ G +HISW +VW Y L+ +KL ++ L+D G+RN +V
Sbjct: 145 LDLKKAIQRYVQLRQEREGGIQHISWSYVWRTYYLTSAGEKLTEDRKKLRDYGIRNRDEV 204
Query: 147 QFV 149
F+
Sbjct: 205 SFI 207
>gi|301769555|ref|XP_002920234.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Ailuropoda melanoleuca]
Length = 204
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 74/119 (62%), Gaps = 2/119 (1%)
Query: 33 LTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATVKDLK 90
L ++ DP+L D+P + TL +V++ I+LE G AM + + K+DG V+ +ATV DLK
Sbjct: 80 LAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEIMPVVVVQNATVLDLK 139
Query: 91 LAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQFV 149
AI++ V ++ G +HISW +VW Y L+ +KL ++ L+D G+RN +V F+
Sbjct: 140 KAIQRYVQLRQEREGGIQHISWSYVWRTYYLTSAGEKLTEDRKKLRDYGIRNRDEVSFI 198
>gi|344292082|ref|XP_003417757.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Loxodonta africana]
Length = 171
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 74/123 (60%), Gaps = 2/123 (1%)
Query: 29 LHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATV 86
L ++ DP+L D+P + TL +V++ I+LE G AM + + K+DG V+ +ATV
Sbjct: 43 FQEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVCVCKMDGEVMPVVVVQNATV 102
Query: 87 KDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQV 146
DLK AI++ V ++ G +HISW +VW Y L+ +KL ++ L+D G+RN +V
Sbjct: 103 LDLKKAIQRYVQLRQEREGGIQHISWSYVWRTYYLTFVGEKLTEDRKKLRDYGIRNRDEV 162
Query: 147 QFV 149
F+
Sbjct: 163 SFI 165
>gi|432868044|ref|XP_004071383.1| PREDICTED: LOW QUALITY PROTEIN: U11/U12 small nuclear
ribonucleoprotein 25 kDa protein-like [Oryzias latipes]
Length = 180
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 74/119 (62%), Gaps = 2/119 (1%)
Query: 33 LTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATVKDLK 90
L L+ DP+L D+P + TL +V++ I+LE G AM + K DG V+ +ATV DLK
Sbjct: 56 LARLVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVKXCKADGEIMPIVVVQNATVLDLK 115
Query: 91 LAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQFV 149
AI++ + +Q G +H+SW++VW Y L Q +KL D++ L+D G+RN +V F+
Sbjct: 116 KAIRRFMELKQQREGGVKHVSWRYVWRTYYLVFQGEKLEDDSIRLKDYGIRNRDEVMFM 174
>gi|403273560|ref|XP_003928576.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein,
partial [Saimiri boliviensis boliviensis]
Length = 200
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 74/123 (60%), Gaps = 2/123 (1%)
Query: 29 LHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATV 86
L ++ DP+L D+P + TL +V++ I+LE G AM + + K+DG V+ SATV
Sbjct: 72 FQEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQSATV 131
Query: 87 KDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQV 146
DLK AI++ + ++ G +HISW +VW Y L+ +KL ++ L+D G+RN +V
Sbjct: 132 LDLKKAIQRYMQLKQEREGGIQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEV 191
Query: 147 QFV 149
F+
Sbjct: 192 SFI 194
>gi|392332036|ref|XP_001062061.2| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
[Rattus norvegicus]
Length = 237
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 74/123 (60%), Gaps = 2/123 (1%)
Query: 29 LHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATV 86
L ++ DP+L D+P + TL +V++ I+LE G AM + + K+DG V+ +ATV
Sbjct: 109 FQEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATV 168
Query: 87 KDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQV 146
DLK AI++ V ++ G +HISW +VW Y L+ +KL ++ L+D G+RN +V
Sbjct: 169 LDLKKAIQRYVQLKQEREGGVQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEV 228
Query: 147 QFV 149
F+
Sbjct: 229 SFI 231
>gi|198438499|ref|XP_002131302.1| PREDICTED: similar to U11/U12 snRNP 25K protein isoform 1 [Ciona
intestinalis]
Length = 143
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 76/119 (63%), Gaps = 2/119 (1%)
Query: 33 LTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDGTSFAVM--NSATVKDLK 90
L LL DP+L D+P++ TL +V+ I+LE G AM I I + DG ++ V+ AT+ +LK
Sbjct: 19 LDELLGDPLLNDLPQEVTLEEVNAKIALEFGQAMTIRIRRADGFTYPVIVKQDATIGELK 78
Query: 91 LAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQFV 149
AI + V +Q G++ ISW+ VW +Y L + QKL +++ L+D G+RN+ +V F+
Sbjct: 79 KAITRHVQLKQQREGGNQCISWRRVWKSYWLYYDGQKLKEDSHKLKDYGLRNHDEVTFI 137
>gi|417408430|gb|JAA50766.1| Hypothetical protein, partial [Desmodus rotundus]
Length = 183
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 74/123 (60%), Gaps = 2/123 (1%)
Query: 29 LHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATV 86
L ++ DP+L D+P + TL +V++ I+LE G AM + + K+DG V+ +ATV
Sbjct: 55 FQEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATV 114
Query: 87 KDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQV 146
DLK AI++ V ++ G +HISW +VW Y L+ +KL ++ L+D G+RN +V
Sbjct: 115 LDLKKAIQRYVQLRQEREGGIQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEV 174
Query: 147 QFV 149
F+
Sbjct: 175 SFI 177
>gi|392351107|ref|XP_213260.4| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
[Rattus norvegicus]
Length = 182
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 74/123 (60%), Gaps = 2/123 (1%)
Query: 29 LHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATV 86
L ++ DP+L D+P + TL +V++ I+LE G AM + + K+DG V+ +ATV
Sbjct: 54 FQEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATV 113
Query: 87 KDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQV 146
DLK AI++ V ++ G +HISW +VW Y L+ +KL ++ L+D G+RN +V
Sbjct: 114 LDLKKAIQRYVQLKQEREGGVQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEV 173
Query: 147 QFV 149
F+
Sbjct: 174 SFI 176
>gi|440913470|gb|ELR62920.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein, partial
[Bos grunniens mutus]
Length = 199
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 74/123 (60%), Gaps = 2/123 (1%)
Query: 29 LHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATV 86
L ++ DP+L D+P + TL +V++ I+LE G AM + + K+DG V+ +ATV
Sbjct: 71 FQEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATV 130
Query: 87 KDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQV 146
DLK AI++ V ++ G +HISW +VW Y L+ +KL ++ L+D G+RN +V
Sbjct: 131 LDLKKAIQRYVQLRQEREGGIQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEV 190
Query: 147 QFV 149
F+
Sbjct: 191 SFI 193
>gi|297283095|ref|XP_001082002.2| PREDICTED: hypothetical protein LOC693295 [Macaca mulatta]
Length = 266
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 74/119 (62%), Gaps = 2/119 (1%)
Query: 33 LTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATVKDLK 90
L ++ DP+L D+P + TL +V++ I+LE G AM + + K+DG V+ SATV DLK
Sbjct: 142 LAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQSATVLDLK 201
Query: 91 LAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQFV 149
AI++ V ++ G +HISW +VW Y L+ +KL ++ L+D G+RN +V F+
Sbjct: 202 KAIQRYVQLKQEREGGIQHISWSYVWRTYHLTSAGEKLTEDKKKLRDYGIRNRDEVSFI 260
>gi|338713072|ref|XP_001496673.3| PREDICTED: u11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Equus caballus]
Length = 208
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 74/123 (60%), Gaps = 2/123 (1%)
Query: 29 LHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATV 86
L ++ DP+L D+P + TL +V++ I+LE G AM + + K+DG V+ +ATV
Sbjct: 80 FQEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATV 139
Query: 87 KDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQV 146
DLK AI++ V ++ G +HISW +VW Y L+ +KL ++ L+D G+RN +V
Sbjct: 140 LDLKKAIQRYVQLRQEREGGIQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEV 199
Query: 147 QFV 149
F+
Sbjct: 200 SFI 202
>gi|432098907|gb|ELK28397.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Myotis
davidii]
Length = 123
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 73/116 (62%), Gaps = 2/116 (1%)
Query: 36 LLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATVKDLKLAI 93
++ DP+L D+P + TL +V++ I+LE G AM + + K+DG V+ +ATV DLK AI
Sbjct: 2 VVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATVLDLKKAI 61
Query: 94 KKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQFV 149
++ V ++ G +HISW +VW Y L+ +KL D+ L+D G+RN +V F+
Sbjct: 62 QRYVQLRQEREGGIQHISWSYVWRTYHLTSAGEKLTDDRKKLRDYGIRNRDEVSFI 117
>gi|73586763|gb|AAI03172.1| SNRNP25 protein [Bos taurus]
Length = 166
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 74/123 (60%), Gaps = 2/123 (1%)
Query: 29 LHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATV 86
L ++ DP+L D+P + TL +V++ I+LE G AM + + K+DG V+ +ATV
Sbjct: 38 FQEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATV 97
Query: 87 KDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQV 146
DLK AI++ V ++ G +HISW +VW Y L+ +KL ++ L+D G+RN +V
Sbjct: 98 LDLKKAIQRYVQLRQEREGGIQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEV 157
Query: 147 QFV 149
F+
Sbjct: 158 SFI 160
>gi|351711231|gb|EHB14150.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein
[Heterocephalus glaber]
Length = 169
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 74/123 (60%), Gaps = 2/123 (1%)
Query: 29 LHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATV 86
L ++ DP+L D+P + TL +V++ I+LE G AM + + K+DG V+ +ATV
Sbjct: 41 FQEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATV 100
Query: 87 KDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQV 146
DLK AI++ V ++ G +HISW +VW Y L+ +KL ++ L+D G+RN +V
Sbjct: 101 LDLKKAIQRYVQLKQEREGGIQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEV 160
Query: 147 QFV 149
F+
Sbjct: 161 SFI 163
>gi|47220063|emb|CAG12211.1| unnamed protein product [Tetraodon nigroviridis]
Length = 188
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 75/123 (60%), Gaps = 2/123 (1%)
Query: 29 LHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDGT--SFAVMNSATV 86
L L+ DP+L D+P + TL +V++ I+LE G AM + +LK DG V+ +ATV
Sbjct: 60 FEEGLAQLVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVLKADGEVMPIVVVQNATV 119
Query: 87 KDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQV 146
DLK AI++ + +Q G +++SW++VW Y L Q +KL D+ L+D G++N +V
Sbjct: 120 LDLKKAIRRFMELKQQREGGVKYVSWRYVWRTYHLVFQGEKLEDDRMRLKDYGIKNRDEV 179
Query: 147 QFV 149
F+
Sbjct: 180 TFM 182
>gi|48427640|tpg|DAA05499.1| TPA_exp: U11/U12 snRNP 25K [Homo sapiens]
gi|123237049|emb|CAI95606.2| chromosome 16 open reading frame 33 [Homo sapiens]
gi|167427356|gb|ABZ80331.1| U11/U12 snRNP 25K protein (predicted) [Callithrix jacchus]
gi|169246091|gb|ACA51067.1| U11/U12 snRNP protein (predicted) [Callicebus moloch]
Length = 123
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 73/116 (62%), Gaps = 2/116 (1%)
Query: 36 LLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATVKDLKLAI 93
++ DP+L D+P + TL +V++ I+LE G AM + + K+DG V+ SATV DLK AI
Sbjct: 2 VVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQSATVLDLKKAI 61
Query: 94 KKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQFV 149
++ V ++ G +HISW +VW Y L+ +KL ++ L+D G+RN +V F+
Sbjct: 62 QRYVQLKQEREGGIQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEVSFI 117
>gi|348509153|ref|XP_003442116.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Oreochromis niloticus]
Length = 187
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 73/119 (61%), Gaps = 2/119 (1%)
Query: 33 LTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATVKDLK 90
L L+ DP+L D+P + TL +V++ I+LE G AM + +LK D V+ +ATV DLK
Sbjct: 63 LARLVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVLKADSEVMPIVVVQNATVLDLK 122
Query: 91 LAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQFV 149
AI + + +Q G +HISW++VW Y L Q +KL D+ L+D G+RN +V F+
Sbjct: 123 KAICRFMELKQQREGGVKHISWRYVWRTYHLVFQGEKLEDDKMRLKDYGIRNRDEVTFM 181
>gi|348584706|ref|XP_003478113.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Cavia porcellus]
Length = 156
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 74/123 (60%), Gaps = 2/123 (1%)
Query: 29 LHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATV 86
L ++ DP+L D+P + TL +V++ I+LE G AM + + K+DG V+ +ATV
Sbjct: 28 FQEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATV 87
Query: 87 KDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQV 146
DLK AI++ V ++ G +HISW +VW Y L+ +KL ++ L+D G+RN +V
Sbjct: 88 LDLKKAIQRYVQLKQEREGGVQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEV 147
Query: 147 QFV 149
F+
Sbjct: 148 SFI 150
>gi|62955357|ref|NP_001017690.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Danio
rerio]
gi|62204893|gb|AAH93151.1| Zgc:112000 [Danio rerio]
Length = 173
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 72/118 (61%), Gaps = 2/118 (1%)
Query: 33 LTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATVKDLK 90
L ++ DP+L D+P + TL +V++ ++LE G AM + + K DG V+ SATV DLK
Sbjct: 49 LALIVQDPLLCDLPIQVTLEEVNSQVALEYGQAMTVRVCKADGEVMPIVVVQSATVLDLK 108
Query: 91 LAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQF 148
AI++ + +Q G +H+SWK+VW + L +KL D+ L+D GVRN +V F
Sbjct: 109 KAIRRYMELKQQREGGVKHVSWKYVWRTFHLVFNGEKLEDDRRKLKDYGVRNRDEVTF 166
>gi|291415424|ref|XP_002723952.1| PREDICTED: chromosome 16 open reading frame 33-like, partial
[Oryctolagus cuniculus]
Length = 174
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 74/123 (60%), Gaps = 2/123 (1%)
Query: 29 LHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATV 86
L ++ DP+L D+P + TL ++++ I+LE G AM + + K+DG V+ +ATV
Sbjct: 46 FQEGLAMVVQDPLLCDLPIQVTLEEINSQIALEYGQAMTVRVSKMDGEVMPVVVVQNATV 105
Query: 87 KDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQV 146
DLK AI++ V ++ G +HISW +VW Y L+ +KL ++ L+D G+RN +V
Sbjct: 106 LDLKKAIQRYVQLKQEREGGIQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEV 165
Query: 147 QFV 149
F+
Sbjct: 166 SFI 168
>gi|183396439|gb|ACC62114.1| U11/U12 snRNP protein (predicted) [Rhinolophus ferrumequinum]
Length = 123
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 73/116 (62%), Gaps = 2/116 (1%)
Query: 36 LLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATVKDLKLAI 93
++ DP+L D+P + TL +V++ I+LE G AM + + K+DG V+ +ATV DLK AI
Sbjct: 2 VVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATVLDLKKAI 61
Query: 94 KKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQFV 149
++ V ++ G +HISW +VW Y L+ +KL ++ L+D G+RN +V F+
Sbjct: 62 QRYVQLRQEREGGIQHISWPYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEVSFI 117
>gi|262205517|ref|NP_001160084.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Bos taurus]
gi|160017307|sp|Q3ZBQ4.2|CP033_BOVIN RecName: Full=U11/U12 small nuclear ribonucleoprotein 25 kDa
protein; Short=U11/U12 snRNP 25 kDa protein
gi|296473635|tpg|DAA15750.1| TPA: U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Bos
taurus]
gi|431906773|gb|ELK10894.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Pteropus
alecto]
Length = 123
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 73/116 (62%), Gaps = 2/116 (1%)
Query: 36 LLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATVKDLKLAI 93
++ DP+L D+P + TL +V++ I+LE G AM + + K+DG V+ +ATV DLK AI
Sbjct: 2 VVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATVLDLKKAI 61
Query: 94 KKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQFV 149
++ V ++ G +HISW +VW Y L+ +KL ++ L+D G+RN +V F+
Sbjct: 62 QRYVQLRQEREGGIQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEVSFI 117
>gi|426254135|ref|XP_004020740.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
[Ovis aries]
Length = 123
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 73/116 (62%), Gaps = 2/116 (1%)
Query: 36 LLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATVKDLKLAI 93
++ DP+L D+P + TL +V++ I+LE G AM + + K+DG V+ +ATV DLK AI
Sbjct: 2 VVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATVLDLKKAI 61
Query: 94 KKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQFV 149
++ V ++ G +HISW +VW Y L+ +KL ++ L+D G+RN +V F+
Sbjct: 62 QRYVQLRQEREGGIQHISWSYVWRTYHLTSAGEKLTEDQKKLRDYGIRNRDEVSFI 117
>gi|226822865|gb|ACO83097.1| U11/U12 snRNP 25K protein (predicted) [Dasypus novemcinctus]
Length = 123
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 73/116 (62%), Gaps = 2/116 (1%)
Query: 36 LLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATVKDLKLAI 93
++ DP+L D+P + TL +V++ I+LE G AM + + K+DG V+ +ATV DLK AI
Sbjct: 2 VVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATVLDLKKAI 61
Query: 94 KKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQFV 149
++ V ++ G +HISW +VW Y L+ +KL ++ L+D G+RN +V F+
Sbjct: 62 QRYVQLKQEREGGIQHISWAYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEVSFI 117
>gi|12859665|dbj|BAB31728.1| unnamed protein product [Mus musculus]
Length = 123
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 73/116 (62%), Gaps = 2/116 (1%)
Query: 36 LLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATVKDLKLAI 93
++ DP+L D+P + TL +V++ I+LE G AM + + K+DG V+ +ATV DLK AI
Sbjct: 2 VVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATVLDLKKAI 61
Query: 94 KKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQFV 149
++ V ++ G +HISW +VW Y L+ +KL ++ L+D G+RN +V F+
Sbjct: 62 QRYVQLKQEREGGVQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEVSFI 117
>gi|262118251|ref|NP_084369.2| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Mus
musculus]
gi|395835627|ref|XP_003790778.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
[Otolemur garnettii]
gi|68052366|sp|Q8VIK1.1|CP033_MOUSE RecName: Full=U11/U12 small nuclear ribonucleoprotein 25 kDa
protein; Short=U11/U12 snRNP 25 kDa protein
gi|16973675|gb|AAL32366.1| C16ORF33 [Mus musculus]
gi|20380350|gb|AAH28766.1| Small nuclear ribonucleoprotein 25 (U11/U12) [Mus musculus]
gi|148691820|gb|EDL23767.1| RIKEN cDNA 3300001G02, isoform CRA_d [Mus musculus]
gi|149052203|gb|EDM04020.1| similar to chromosome 16 open reading frame 33; minus -99 protein
(predicted), isoform CRA_b [Rattus norvegicus]
gi|195977134|gb|ACG63681.1| U11/U12 small nuclear ribonucleoprotein protein (predicted)
[Otolemur garnettii]
Length = 123
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 73/116 (62%), Gaps = 2/116 (1%)
Query: 36 LLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATVKDLKLAI 93
++ DP+L D+P + TL +V++ I+LE G AM + + K+DG V+ +ATV DLK AI
Sbjct: 2 VVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATVLDLKKAI 61
Query: 94 KKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQFV 149
++ V ++ G +HISW +VW Y L+ +KL ++ L+D G+RN +V F+
Sbjct: 62 QRYVQLKQEREGGVQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEVSFI 117
>gi|395853139|ref|XP_003799074.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Otolemur garnettii]
Length = 194
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 74/123 (60%), Gaps = 2/123 (1%)
Query: 29 LHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATV 86
L ++ DP+L D+P + TL +V++ I+LE G AM + + K+DG V+ +ATV
Sbjct: 66 FQEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATV 125
Query: 87 KDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQV 146
DLK AI++ V ++ G +HISW +VW Y L+ + L ++ L+D G+RN ++V
Sbjct: 126 LDLKKAIQRYVQLKQEREGGVQHISWSYVWRTYHLTSAGEMLTEDRKKLRDYGIRNRAEV 185
Query: 147 QFV 149
F+
Sbjct: 186 SFI 188
>gi|339522115|gb|AEJ84222.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Capra
hircus]
Length = 123
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 72/116 (62%), Gaps = 2/116 (1%)
Query: 36 LLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATVKDLKLAI 93
++ DP+L D+P + TL +V++ I+LE G AM + + K+DG V+ +ATV DLK AI
Sbjct: 2 VVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATVLDLKKAI 61
Query: 94 KKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQFV 149
++ V + G +HISW +VW Y L+ +KL ++ L+D G+RN +V F+
Sbjct: 62 QRYVQLRREREGGIQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEVSFI 117
>gi|363739485|ref|XP_423619.3| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
[Gallus gallus]
Length = 200
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 74/123 (60%), Gaps = 2/123 (1%)
Query: 29 LHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDGTSF--AVMNSATV 86
+ L L+ DP+L D+P + T ++ + ++LE G AM + + K DG S V+ +A+V
Sbjct: 73 FQAALARLVQDPLLCDLPPQVTPEEIGSQVALEYGQAMTVRVCKADGESMPVVVVQNASV 132
Query: 87 KDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQV 146
DLK A+++ V + G +H+SWK++W Y L++ +KL D+ L++ G+RN +V
Sbjct: 133 LDLKKALRRHVQLRQARRGGVQHLSWKYIWRTYHLTYAGEKLADDRKKLREYGIRNRDEV 192
Query: 147 QFV 149
F+
Sbjct: 193 SFI 195
>gi|354499600|ref|XP_003511896.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Cricetulus griseus]
Length = 169
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 74/123 (60%), Gaps = 2/123 (1%)
Query: 29 LHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATV 86
L ++ DP+L D+P + TL +V++ I+LE G AM + + K+DG V+ +ATV
Sbjct: 41 FQEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATV 100
Query: 87 KDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQV 146
DLK AI++ + ++ G +HISW +VW Y L+ +KL ++ L+D G+RN +V
Sbjct: 101 LDLKKAIQRYMQLKQEREGGIQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEV 160
Query: 147 QFV 149
F+
Sbjct: 161 SFI 163
>gi|89268289|emb|CAJ82445.1| novel protein [Xenopus (Silurana) tropicalis]
Length = 175
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 75/123 (60%), Gaps = 2/123 (1%)
Query: 29 LHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATV 86
L ++ DP+L D+P + TL ++++ I+LE G AM + + K DG V+ +ATV
Sbjct: 47 FQEGLAMIVQDPLLCDLPIQVTLEEINSQIALEYGQAMTVRVCKADGEIMPVVVVQNATV 106
Query: 87 KDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQV 146
DLK AI++ + Q G +HISWK+VW Y LS +KL +++ +L++ G++N +V
Sbjct: 107 LDLKRAIQRYIQLKHQREGGIQHISWKYVWRTYHLSFSGEKLEEDSRSLREYGIKNRDEV 166
Query: 147 QFV 149
FV
Sbjct: 167 VFV 169
>gi|62859759|ref|NP_001016702.1| uncharacterized protein LOC549456 [Xenopus (Silurana) tropicalis]
gi|60550970|gb|AAH91616.1| hypothetical protein LOC549456 [Xenopus (Silurana) tropicalis]
Length = 167
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 75/123 (60%), Gaps = 2/123 (1%)
Query: 29 LHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATV 86
L ++ DP+L D+P + TL ++++ I+LE G AM + + K DG V+ +ATV
Sbjct: 39 FQEGLAMIVQDPLLCDLPIQVTLEEINSQIALEYGQAMTVRVCKADGEIMPVVVVQNATV 98
Query: 87 KDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQV 146
DLK AI++ + Q G +HISWK+VW Y LS +KL +++ +L++ G++N +V
Sbjct: 99 LDLKRAIQRYIQLKHQREGGIQHISWKYVWRTYHLSFSGEKLEEDSRSLREYGIKNRDEV 158
Query: 147 QFV 149
FV
Sbjct: 159 VFV 161
>gi|335284777|ref|XP_003124710.2| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like, partial [Sus scrofa]
Length = 134
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 72/119 (60%), Gaps = 2/119 (1%)
Query: 33 LTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATVKDLK 90
L ++ DP+L D+P + TL +V++ I+LE G AM + + K DG V+ +ATV DLK
Sbjct: 10 LAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKTDGEVMPVVVVQNATVLDLK 69
Query: 91 LAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQFV 149
AI++ V ++ G +HISW +VW Y L +KL ++ L+D G+RN +V F+
Sbjct: 70 KAIQRYVQLRQEREGGVQHISWSYVWRTYHLMAAGEKLTEDRKKLRDYGIRNRDEVSFI 128
>gi|148227336|ref|NP_001083423.1| uncharacterized protein LOC398918 [Xenopus laevis]
gi|38014507|gb|AAH60402.1| MGC68520 protein [Xenopus laevis]
Length = 168
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 74/123 (60%), Gaps = 2/123 (1%)
Query: 29 LHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDGT--SFAVMNSATV 86
L ++ DP+L D+P + TL ++++ I+LE G AM + + K D V+ +ATV
Sbjct: 40 FQEGLAMIVQDPLLCDLPIQVTLEEINSQIALEYGQAMTVRVCKEDEEIMPVVVVQNATV 99
Query: 87 KDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQV 146
DLK AI++ + Q G +HISWK+VW Y LS+ +KL DE +L++ G++N +V
Sbjct: 100 LDLKRAIQRYIQLKHQREGGIQHISWKYVWRTYHLSYSGEKLDDEAKSLREYGIKNRDEV 159
Query: 147 QFV 149
FV
Sbjct: 160 VFV 162
>gi|390333381|ref|XP_794255.2| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Strongylocentrotus purpuratus]
Length = 167
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 76/134 (56%), Gaps = 2/134 (1%)
Query: 27 ARLHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSA 84
A + L +LDDP+L D+P +V+ I+LE G AM + + + +G VM +A
Sbjct: 33 AIVRKELGEILDDPLLEDLPPDVCAEEVNLQIALEYGQAMTVIVRRAEGDVMPVVVMQTA 92
Query: 85 TVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNS 144
TV+DLK AIK+ + + ISW++VW +Y L + +KL D+ ++D G+RN +
Sbjct: 93 TVQDLKSAIKRYFELKQDREEIKKKISWRYVWRSYYLCFEGEKLTDDYKKIRDFGIRNRA 152
Query: 145 QVQFVPFVLSKGSG 158
+V F + SKG G
Sbjct: 153 EVTFAKRLHSKGGG 166
>gi|390337966|ref|XP_001199326.2| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Strongylocentrotus purpuratus]
Length = 167
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 76/134 (56%), Gaps = 2/134 (1%)
Query: 27 ARLHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSA 84
A + L +LDDP+L D+P +V+ I+LE G AM + + + +G VM +A
Sbjct: 33 AIVRKELGEILDDPLLKDLPPDVCAEEVNLQIALEYGQAMTVIVRRAEGDVMPVVVMQTA 92
Query: 85 TVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNS 144
TV+DLK AIK+ + + ISW++VW +Y L + +KL D+ ++D G+RN +
Sbjct: 93 TVQDLKSAIKRYFELKQDREEIKKKISWRYVWRSYYLCFEGEKLTDDYKKIRDFGIRNRA 152
Query: 145 QVQFVPFVLSKGSG 158
+V F + SKG G
Sbjct: 153 EVTFAKRLHSKGGG 166
>gi|344254276|gb|EGW10380.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Cricetulus
griseus]
Length = 123
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 73/116 (62%), Gaps = 2/116 (1%)
Query: 36 LLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATVKDLKLAI 93
++ DP+L D+P + TL +V++ I+LE G AM + + K+DG V+ +ATV DLK AI
Sbjct: 2 VVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATVLDLKKAI 61
Query: 94 KKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQFV 149
++ + ++ G +HISW +VW Y L+ +KL ++ L+D G+RN +V F+
Sbjct: 62 QRYMQLKQEREGGIQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEVSFI 117
>gi|410902817|ref|XP_003964890.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Takifugu rubripes]
Length = 183
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 74/123 (60%), Gaps = 2/123 (1%)
Query: 29 LHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDGT--SFAVMNSATV 86
L L+ DP+L D+P + TL +V++ I+LE G AM + +LK DG V+ +ATV
Sbjct: 55 FEEGLAQLVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVKVLKADGEVMPIVVVQNATV 114
Query: 87 KDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQV 146
DLK AI++ + +Q G + +SW++VW + L Q +KL D+ L+D G++N +V
Sbjct: 115 LDLKKAIRRFMELKQQREGGVKCVSWRYVWRTFNLVFQGEKLEDDRMRLRDYGIKNRDEV 174
Query: 147 QFV 149
F+
Sbjct: 175 TFM 177
>gi|126335357|ref|XP_001371960.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Monodelphis domestica]
Length = 175
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 73/123 (59%), Gaps = 2/123 (1%)
Query: 29 LHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATV 86
L ++ DP+L D+P + TL ++++ I+LE G AM + + K+DG V+ +AT
Sbjct: 47 FQEGLAMIVQDPLLCDLPIQVTLEEINSQIALEYGQAMTVRVCKVDGEVMPVVVVQNATT 106
Query: 87 KDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQV 146
DLK AI++ V ++ G +HISW ++W Y L+ +KL ++ L++ G+RN +V
Sbjct: 107 LDLKKAIQRYVQLKQEREGGIQHISWSYIWRTYHLTFAGEKLTEDGKKLREYGIRNRDEV 166
Query: 147 QFV 149
F+
Sbjct: 167 SFI 169
>gi|213510978|ref|NP_001134941.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Salmo
salar]
gi|209737428|gb|ACI69583.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Salmo
salar]
Length = 188
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 73/123 (59%), Gaps = 2/123 (1%)
Query: 29 LHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATV 86
L L+ DP+L D+P + TL +V++ ++LE G AM + + K DG V+ +A V
Sbjct: 60 FEEGLARLVQDPLLCDLPIQVTLEEVNSQVALEYGQAMTVRVCKADGEVMPIVVVQNAMV 119
Query: 87 KDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQV 146
DLK AI++ + +Q G +H+SW++VW + L Q +KL D+ L+D G+RN +V
Sbjct: 120 LDLKKAIQRFMELKQQRVGGVKHVSWRYVWRTFHLVFQGEKLDDDKMKLKDYGIRNRDEV 179
Query: 147 QFV 149
F+
Sbjct: 180 TFM 182
>gi|293331043|ref|NP_001167854.1| uncharacterized protein LOC100381558 [Zea mays]
gi|223944451|gb|ACN26309.1| unknown [Zea mays]
Length = 108
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 55/71 (77%)
Query: 15 EVGDYNSSTMKKARLHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLD 74
EV Y S K+ARL S L ALLDDPILADV +KP+L+DVDTLI+LE+GSAMR++++KLD
Sbjct: 10 EVAAYQSKEAKQARLQSMLAALLDDPILADVTRKPSLADVDTLINLELGSAMRLTVVKLD 69
Query: 75 GTSFAVMNSAT 85
TSF S +
Sbjct: 70 NTSFGTHRSPS 80
>gi|327289177|ref|XP_003229301.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Anolis carolinensis]
Length = 151
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 72/121 (59%), Gaps = 4/121 (3%)
Query: 33 LTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDGTS----FAVMNSATVKD 88
L L+ DP+L D+P + T ++ + ++LE G AM + + + D V+ +A+V D
Sbjct: 26 LARLVRDPLLCDLPAQVTPEEISSQVALEYGQAMTVRVRRADAPEAPLPVVVVQNASVLD 85
Query: 89 LKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQF 148
LK A+++ V ++ G +HISW+++W YCL+ +KL D+ L++ G+RN +V F
Sbjct: 86 LKRALRRFVQLRQEREGGIQHISWRYLWRTYCLTFGGEKLTDDRKKLREYGIRNRDEVTF 145
Query: 149 V 149
V
Sbjct: 146 V 146
>gi|226372070|gb|ACO51660.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Rana
catesbeiana]
Length = 123
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 72/116 (62%), Gaps = 2/116 (1%)
Query: 36 LLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATVKDLKLAI 93
++ DP+L D+P + TL ++++ I+LE G AM +++ K D V+ +ATV DLK AI
Sbjct: 2 MVQDPLLCDLPIQVTLEEINSQIALEFGQAMTVNVCKADKDIMPIVVVQNATVLDLKRAI 61
Query: 94 KKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQFV 149
++ + Q G +H+SWK+VW Y L+ +KL + +L++ G++N +V FV
Sbjct: 62 QRYIQLKHQREGGIQHVSWKYVWRTYYLAFAGEKLDRDEKSLREYGIKNRDEVCFV 117
>gi|260814781|ref|XP_002602092.1| hypothetical protein BRAFLDRAFT_61248 [Branchiostoma floridae]
gi|229287398|gb|EEN58104.1| hypothetical protein BRAFLDRAFT_61248 [Branchiostoma floridae]
Length = 136
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 71/125 (56%), Gaps = 2/125 (1%)
Query: 36 LLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATVKDLKLAI 93
L+ DP+L+D+P TL +V + I+LE G AM++ + K G V ATV DLK AI
Sbjct: 11 LVKDPLLSDLPAGVTLDEVKSQIALEYGQAMKVIVRKECGGIMPIVVPQDATVVDLKHAI 70
Query: 94 KKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQFVPFVL 153
+ V + G ISW++VW Y L+ +KL N L+D G+RN ++++F+ +
Sbjct: 71 SRYVTLKQTREGGTTKISWRYVWRTYWLTFDGEKLSQNNKKLKDYGIRNRAELRFIKRLR 130
Query: 154 SKGSG 158
SK G
Sbjct: 131 SKVEG 135
>gi|291223915|ref|XP_002731950.1| PREDICTED: chromosome 16 open reading frame 33-like [Saccoglossus
kowalevskii]
Length = 162
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 70/119 (58%), Gaps = 2/119 (1%)
Query: 33 LTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATVKDLK 90
+ +L DP+L+D+P T +++ I+LE G A+ + + K +G V+ ATV+DL+
Sbjct: 38 MKEILQDPLLSDLPLDVTEEEINHQIALEYGQALTVKVRKQNGEVIPVVVLQGATVRDLR 97
Query: 91 LAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQFV 149
AIK+ + G++ ISW+++W Y L + +KL + N ++D G+RN +V FV
Sbjct: 98 NAIKRHFTMKLEREGGNKFISWRYIWKTYWLCFEEEKLTEINKKIKDYGIRNRDEVTFV 156
>gi|321459551|gb|EFX70603.1| hypothetical protein DAPPUDRAFT_231603 [Daphnia pulex]
Length = 207
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 75/126 (59%), Gaps = 5/126 (3%)
Query: 29 LHSTLTALL-DDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDGTSFAVM--NSAT 85
+ +TL +LL DPIL D+P TL +V +LI+LE G A+ + I + DGTS V+ +AT
Sbjct: 76 VRNTLDSLLATDPILNDLPSAVTLDEVQSLIALEHGQAIHVEIHREDGTSLPVIIRQNAT 135
Query: 86 VKDLKLAIKK--KVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNN 143
V LK A+++ +++ +N R I+WK+VW Y L KL D+ + ++DC + N
Sbjct: 136 VGQLKRAVERATELSLSRDANQRQRRINWKYVWKTYWLYAHGAKLKDDMATIKDCALSNG 195
Query: 144 SQVQFV 149
V F+
Sbjct: 196 DGVSFI 201
>gi|443722217|gb|ELU11180.1| hypothetical protein CAPTEDRAFT_157309 [Capitella teleta]
Length = 174
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 72/117 (61%), Gaps = 3/117 (2%)
Query: 36 LLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDGT--SFAVMNSATVKDLKLAI 93
++ DP+L D+P + T+ ++ + I+LE G AM +++ + D V+ +ATV DLK AI
Sbjct: 54 IVGDPLLQDLPSQVTVEEIRSQIALEHGQAMTVNVRRGDDKVLPIVVLQNATVADLKKAI 113
Query: 94 KKKVN-DMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQFV 149
+ + ++ + G RHISW++VW L QKL ++ + L+D G+ N+S+V F+
Sbjct: 114 RHYFHLNLNRDGDGDRHISWRYVWKRNWLYFNGQKLTEDKTLLKDYGIFNSSEVTFI 170
>gi|442756633|gb|JAA70475.1| Putative cytochrome c oxidase subunit cox19 [Ixodes ricinus]
Length = 164
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 83/139 (59%), Gaps = 5/139 (3%)
Query: 13 EVEVGDYNSSTMKKARLHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILK 72
E E+ +++ + A++H+ ++ +DP+L+++ + T+ ++ + ++LE G AM + +L+
Sbjct: 23 EKELSFHDAMAIADAKIHALIS---NDPLLSNLHPEVTVEELRSYLALEHGQAMSLRVLR 79
Query: 73 LDGTSFAVM--NSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLD 130
DG + V+ ATV DLK A+++ R +SW+++W Y LS + Q L
Sbjct: 80 ADGDPYTVVVEQKATVLDLKKALQRHATLRMARKGVKRVVSWRYIWRTYWLSFEGQPLNQ 139
Query: 131 ENSALQDCGVRNNSQVQFV 149
+ + L+D G+RNNS++ F+
Sbjct: 140 DRTLLRDAGIRNNSELCFI 158
>gi|444727238|gb|ELW67739.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Tupaia
chinensis]
Length = 131
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 36 LLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATVKDLKLAI 93
++ DP+L D+P + TL +V++ I+LE G AM + + K+DG V+ +ATV DLK AI
Sbjct: 2 VVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATVLDLKKAI 61
Query: 94 KKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQD 137
++ V ++ G +HISW +VW Y L+ +KL ++ L++
Sbjct: 62 QRHVQLKQEREGGTQHISWSYVWRTYHLTSAGEKLTEDRKKLRE 105
>gi|18463966|gb|AAL73047.1| C16ORF33 [Sphoeroides nephelus]
Length = 109
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 63/102 (61%), Gaps = 2/102 (1%)
Query: 50 TLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATVKDLKLAIKKKVNDMEQSNLGH 107
TL +V++ I+LE G AM + +LK DG V+ +ATV DLK AI++ + +Q G
Sbjct: 2 TLEEVNSQIALEYGQAMTVRVLKADGEVMPIVVVQNATVLDLKKAIRRFMELKQQREGGV 61
Query: 108 RHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQFV 149
+++SW++VW Y L Q +KL + L+D G++N +V F+
Sbjct: 62 KYVSWRYVWRTYHLVFQGEKLEGDRMRLKDYGIKNRDEVTFM 103
>gi|335308396|ref|XP_003361215.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like, partial [Sus scrofa]
Length = 109
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 50 TLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATVKDLKLAIKKKVNDMEQSNLGH 107
TL +V++ I+LE G AM + + K DG V+ +ATV DLK AI++ V ++ G
Sbjct: 2 TLEEVNSQIALEYGQAMTVRVCKTDGEVMPVVVVQNATVLDLKKAIQRYVQLRQEREGGV 61
Query: 108 RHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQFV 149
+HISW +VW Y L +KL ++ L+D G+RN +V F+
Sbjct: 62 QHISWSYVWRTYHLMAAGEKLTEDRKKLRDYGIRNRDEVSFI 103
>gi|357437001|ref|XP_003588776.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Medicago
truncatula]
gi|355477824|gb|AES59027.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Medicago
truncatula]
Length = 266
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 66/123 (53%), Gaps = 5/123 (4%)
Query: 49 PTLSDVDTLISLEMGSAMRISILKLDGTSFAVMNS--ATVKDLKLAIKKKVNDMEQSNLG 106
P S L +R+S+LKLDGTSF V S AT+ +LK A++ + M Q G
Sbjct: 31 PIFSTKSLLYDKLPSEPLRLSVLKLDGTSFDVHVSKNATIAELKDAVEGVFSYMPQH--G 88
Query: 107 HRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQFVPFVLSKGSGKHSKRRKH 166
ISW HVW +CL + QKL+ E L++ GV+++ Q+ F+ S G KR K
Sbjct: 89 PAKISWPHVWGQFCLCYDGQKLVTEKDYLKNYGVKDSDQLHFIRHA-SNNCGARRKRSKK 147
Query: 167 RIF 169
R+F
Sbjct: 148 RVF 150
>gi|388501394|gb|AFK38763.1| unknown [Medicago truncatula]
Length = 226
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 66/123 (53%), Gaps = 5/123 (4%)
Query: 49 PTLSDVDTLISLEMGSAMRISILKLDGTSFAVMNS--ATVKDLKLAIKKKVNDMEQSNLG 106
P S L +R+S+LKLDGTSF V S AT+ +LK A++ + M Q G
Sbjct: 31 PIFSTKSLLYDKLPSEPLRLSVLKLDGTSFDVHVSKNATIAELKDAVEGVFSYMPQH--G 88
Query: 107 HRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQFVPFVLSKGSGKHSKRRKH 166
ISW HVW +CL + QKL+ E L++ GV+++ Q+ F+ S G KR K
Sbjct: 89 PAKISWPHVWGQFCLCYDGQKLVTEKDYLKNYGVKDSDQLHFIRHA-SNNCGARRKRSKK 147
Query: 167 RIF 169
R+F
Sbjct: 148 RVF 150
>gi|156365484|ref|XP_001626675.1| predicted protein [Nematostella vectensis]
gi|156213561|gb|EDO34575.1| predicted protein [Nematostella vectensis]
Length = 154
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 71/120 (59%), Gaps = 4/120 (3%)
Query: 33 LTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDGTS----FAVMNSATVKD 88
L+ ++ DP+L +P +PT+ ++ ++LE G A+ +++ + D + V+ ATV D
Sbjct: 28 LSKVMQDPLLVGLPSEPTVEEITAQLALEHGLAIMVNVRQQDKMATILPVVVVQDATVLD 87
Query: 89 LKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQF 148
LK AI++ + + G +ISWK+VW + L + QKL D++ +L++ G+ + +V F
Sbjct: 88 LKKAIQRHITLKQTREGGATYISWKYVWRTFWLMFEGQKLSDDHKSLKEYGISSRDEVTF 147
>gi|149496551|ref|XP_001514542.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like, partial [Ornithorhynchus anatinus]
Length = 109
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 61/101 (60%), Gaps = 2/101 (1%)
Query: 50 TLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATVKDLKLAIKKKVNDMEQSNLGH 107
TL ++++ I+LE G AM + + K+D V+ +ATV DLK AI++ V ++ G
Sbjct: 2 TLEEINSQIALEYGQAMTVRVCKVDEEVIPVVVVQNATVLDLKKAIQRSVQLRQEREGGT 61
Query: 108 RHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQF 148
+HISW +VW Y L+ +KL ++ L++ G+RN QV F
Sbjct: 62 QHISWSYVWRTYHLTFAGEKLTEDGKKLREYGIRNRDQVTF 102
>gi|220897509|emb|CAX15111.1| chromosome 16 open reading frame 33 [Homo sapiens]
Length = 96
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 62/101 (61%), Gaps = 6/101 (5%)
Query: 36 LLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDGTSFAVMNSATVKDLKLAIKK 95
++ DP+L D+P + TL +V++ I+LE G AM + + K+DG SATV DLK AI++
Sbjct: 2 VVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDG------ESATVLDLKKAIQR 55
Query: 96 KVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQ 136
V ++ G +HISW +VW Y L+ +KL ++ L+
Sbjct: 56 YVQLKQEREGGIQHISWSYVWRTYHLTSAGEKLTEDRKKLR 96
>gi|241163699|ref|XP_002409330.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein, putative
[Ixodes scapularis]
gi|215494528|gb|EEC04169.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein, putative
[Ixodes scapularis]
Length = 136
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 69/114 (60%), Gaps = 2/114 (1%)
Query: 38 DDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDGTSFAVM--NSATVKDLKLAIKK 95
+DP+L+++ + T+ ++ + ++LE G AM + +L+ DG + V+ AT+ DLK A+++
Sbjct: 17 NDPLLSNLHPEVTVEELRSYLALEHGQAMSLRVLRADGDPYTVVVEQKATILDLKKALQR 76
Query: 96 KVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQFV 149
R +SW+++W Y LS + Q L + + L+D G+RNNS++ F+
Sbjct: 77 HATLRMARKGVKRVVSWRYIWKTYWLSFEGQPLNQDRTLLRDTGIRNNSELCFI 130
>gi|395515604|ref|XP_003761991.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
[Sarcophilus harrisii]
Length = 168
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 62/102 (60%), Gaps = 2/102 (1%)
Query: 50 TLSDVDTLISLEMGSAMRISILKLDGT--SFAVMNSATVKDLKLAIKKKVNDMEQSNLGH 107
TL ++++ I+LE G AM + + K+DG V+ +AT DLK AI++ V ++ G
Sbjct: 61 TLEEINSQIALEYGQAMTVRVCKVDGEVMPVVVVQNATTLDLKKAIQRYVQLKQEREGGI 120
Query: 108 RHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQFV 149
+HISW ++W Y L+ +KL ++ L++ G+RN +V F+
Sbjct: 121 QHISWSYIWRTYHLTFAGEKLTEDAKKLREYGIRNRDEVSFI 162
>gi|224089270|ref|XP_002308669.1| predicted protein [Populus trichocarpa]
gi|222854645|gb|EEE92192.1| predicted protein [Populus trichocarpa]
Length = 292
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 58/86 (67%), Gaps = 4/86 (4%)
Query: 66 MRISILKLDGTSFA--VMNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSH 123
+R+S+LKLD +SF VM SATV++L+ A++ + M Q G ISW H+W ++CL +
Sbjct: 79 LRLSVLKLDASSFEIEVMKSATVEELRQAVEAAFSYMPQEGPGK--ISWPHLWGHFCLCY 136
Query: 124 QNQKLLDENSALQDCGVRNNSQVQFV 149
+QKLL E +++ G+++ Q+QF+
Sbjct: 137 GDQKLLMETDYIKNYGIKDGDQLQFI 162
>gi|346473065|gb|AEO36377.1| hypothetical protein [Amblyomma maculatum]
Length = 171
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 73/124 (58%), Gaps = 5/124 (4%)
Query: 28 RLHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDGTSFAVM--NSAT 85
++H+ +++ DP+L ++ + T ++ + ++LE G AM + + K D + V+ AT
Sbjct: 45 KIHALISS---DPLLNNLHPEVTTDELKSYLALEHGQAMSLVVHKADNDYYTVVVEQKAT 101
Query: 86 VKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQ 145
V DLK A+++ V R +SWK+VW Y LS + + L D+ + L+D G+RNNSQ
Sbjct: 102 VLDLKKALRRHVTLRMARKGVKRVLSWKYVWKTYWLSFEGELLRDDKALLRDFGIRNNSQ 161
Query: 146 VQFV 149
+ FV
Sbjct: 162 LSFV 165
>gi|145351239|ref|NP_194954.2| ubiquitin-like family protein [Arabidopsis thaliana]
gi|26450559|dbj|BAC42392.1| unknown protein [Arabidopsis thaliana]
gi|332660628|gb|AEE86028.1| ubiquitin-like family protein [Arabidopsis thaliana]
Length = 239
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 61/87 (70%), Gaps = 4/87 (4%)
Query: 65 AMRISILKLDGTSFA--VMNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLS 122
+++++LKLDG+SF V+ +ATV +LK+A++ + + S G ISW HVW +CLS
Sbjct: 37 PIKLTVLKLDGSSFGIQVLKTATVGELKMAVEAAFSHLPISGPGK--ISWPHVWGQFCLS 94
Query: 123 HQNQKLLDENSALQDCGVRNNSQVQFV 149
+++++L++E+ L + G+++ Q++F+
Sbjct: 95 YEDKRLINESEYLTEFGIKDGDQLRFI 121
>gi|145334195|ref|NP_001078478.1| ubiquitin-like family protein [Arabidopsis thaliana]
gi|332660629|gb|AEE86029.1| ubiquitin-like family protein [Arabidopsis thaliana]
Length = 204
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 61/85 (71%), Gaps = 3/85 (3%)
Query: 65 AMRISILKLDGTSFAVMNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQ 124
+++++LKLDG+SF V+ +ATV +LK+A++ + + S G ISW HVW +CLS++
Sbjct: 5 PIKLTVLKLDGSSF-VLKTATVGELKMAVEAAFSHLPISGPGK--ISWPHVWGQFCLSYE 61
Query: 125 NQKLLDENSALQDCGVRNNSQVQFV 149
+++L++E+ L + G+++ Q++F+
Sbjct: 62 DKRLINESEYLTEFGIKDGDQLRFI 86
>gi|297798732|ref|XP_002867250.1| hypothetical protein ARALYDRAFT_491506 [Arabidopsis lyrata subsp.
lyrata]
gi|297313086|gb|EFH43509.1| hypothetical protein ARALYDRAFT_491506 [Arabidopsis lyrata subsp.
lyrata]
Length = 237
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 61/87 (70%), Gaps = 4/87 (4%)
Query: 65 AMRISILKLDGTSFA--VMNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLS 122
+++++LKLDG+SF V+ +ATV +LK+A++ + + S G ISW HVW +CLS
Sbjct: 36 PIKLTVLKLDGSSFGIQVLKTATVGELKMAVEAAFSHLPISGPGK--ISWPHVWGQFCLS 93
Query: 123 HQNQKLLDENSALQDCGVRNNSQVQFV 149
+++++L++E+ L + G+++ Q++F+
Sbjct: 94 YEDKRLINESEYLLEFGIKDGDQLRFI 120
>gi|21554720|gb|AAM63670.1| unknown [Arabidopsis thaliana]
Length = 208
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 65/106 (61%), Gaps = 9/106 (8%)
Query: 66 MRISILKLDGTSF--AVMNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSH 123
+R+S+LKLDG+SF V+ SATV DLK+AI+ + + + G ISW HVW ++CL
Sbjct: 19 IRLSVLKLDGSSFDVYVLTSATVGDLKVAIETAFSHVPKK--GPSKISWSHVWGHFCLCF 76
Query: 124 QNQKLLDENSALQDCGVRNNSQVQFVPFV-----LSKGSGKHSKRR 164
QKL+ + + + G+++ +V+F V LSKG + SKR+
Sbjct: 77 GGQKLITDTDCIGNYGMKDGDEVRFKNHVSGNAELSKGYSRKSKRK 122
>gi|405977277|gb|EKC41736.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Crassostrea
gigas]
Length = 171
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 62/101 (61%), Gaps = 2/101 (1%)
Query: 39 DPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDGT--SFAVMNSATVKDLKLAIKKK 96
D +L D+P + TL +V++ I+LE G AM +++ + DG S V+ + TV DLK AIK+
Sbjct: 71 DSLLYDLPPEVTLEEVNSFIALEHGQAMLVNVQRADGEVLSVVVVQNGTVLDLKHAIKRH 130
Query: 97 VNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQD 137
+ + G +HISWK++W Y L + QKL ++ L++
Sbjct: 131 MTLKLSRSKGKKHISWKYIWKRYWLYFEGQKLTEDKKQLKE 171
>gi|427786405|gb|JAA58654.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 168
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 79/142 (55%), Gaps = 6/142 (4%)
Query: 11 EEEVEVGDYNSS-TMKKARLHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRIS 69
EE EV + + + ++H+ ++ +DP+L ++ + T ++ ++LE G AM +
Sbjct: 24 EEANEVLSFQEAMAIADKKIHALIS---NDPLLNNLHPEVTTDELKLYLALEHGQAMSLV 80
Query: 70 ILKLDGTSFAVM--NSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQK 127
+ K +G + V+ ATV DLK AI++ V R +SWK+VW Y LS +
Sbjct: 81 VHKANGDYYTVVVEQKATVLDLKKAIRRHVTLRMARKGVKRVLSWKYVWKTYWLSFDGEL 140
Query: 128 LLDENSALQDCGVRNNSQVQFV 149
L ++ + L+D G+RNNSQ+ FV
Sbjct: 141 LKEDKALLRDFGIRNNSQLTFV 162
>gi|255548890|ref|XP_002515501.1| hypothetical protein RCOM_0923760 [Ricinus communis]
gi|223545445|gb|EEF46950.1| hypothetical protein RCOM_0923760 [Ricinus communis]
Length = 571
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 64/107 (59%), Gaps = 8/107 (7%)
Query: 66 MRISILKLDGTSF--AVMNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSH 123
+++SILKLDG+ F VM SATV +L+ AI+ + M + G ISW HVW+++CL
Sbjct: 56 LKLSILKLDGSCFDVEVMKSATVAELRQAIEAVFSHMPRKGPGK--ISWPHVWSHFCLMF 113
Query: 124 QNQKLLDENSALQDCGVRNNSQVQFVPFVLSKGSGKHSKRRKHRIFR 170
+ QKL+ E + G+R+ Q+QF+ + S +S R+K + R
Sbjct: 114 EGQKLVRETDYIGYYGIRDGDQLQFIRHI----STSYSIRKKRSMKR 156
>gi|15239396|ref|NP_197916.1| ubiquitin-like domain-containing protein-like protein [Arabidopsis
thaliana]
gi|26451503|dbj|BAC42849.1| unknown protein [Arabidopsis thaliana]
gi|28973251|gb|AAO63950.1| unknown protein [Arabidopsis thaliana]
gi|332006045|gb|AED93428.1| ubiquitin-like domain-containing protein-like protein [Arabidopsis
thaliana]
Length = 208
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 65/106 (61%), Gaps = 9/106 (8%)
Query: 66 MRISILKLDGTSF--AVMNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSH 123
+R+S+LKLDG+SF V+ SATV DLK+AI+ + + + G ISW HVW ++CL
Sbjct: 19 IRLSVLKLDGSSFDVYVLTSATVGDLKVAIETAFSHVPKK--GPSKISWSHVWGHFCLCF 76
Query: 124 QNQKLLDENSALQDCGVRNNSQVQFVPF-----VLSKGSGKHSKRR 164
QKL+ + + + G+++ +V+F VLSKG + SK++
Sbjct: 77 GGQKLITDTDCIGNYGMKDGDEVRFKNHVSGNAVLSKGYSRKSKQK 122
>gi|116779533|gb|ABK21326.1| unknown [Picea sitchensis]
Length = 186
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 69/112 (61%), Gaps = 5/112 (4%)
Query: 65 AMRISILKLDGTSF--AVMNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLS 122
++R+ I ++D TSF +V +A+V +LK AI+ K + S + ISW HVW N+CL+
Sbjct: 28 SIRLCIFRMDNTSFDVSVPGTASVLELKKAIEDKFGN---SQMEEGKISWCHVWGNFCLT 84
Query: 123 HQNQKLLDENSALQDCGVRNNSQVQFVPFVLSKGSGKHSKRRKHRIFRGLSK 174
+++++L+++ S L G++++ ++ FV + S G+ RRKH F L K
Sbjct: 85 YEDRELVNDGSLLSSFGIKDSDELFFVRHMSSASQGEKLHRRKHSTFGVLKK 136
>gi|297808549|ref|XP_002872158.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297317995|gb|EFH48417.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 208
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 64/106 (60%), Gaps = 9/106 (8%)
Query: 66 MRISILKLDGTSF--AVMNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSH 123
+R+S+LKLDG+SF V+ SATV DLK+AI+ + + + G ISW HVW ++CL
Sbjct: 19 IRLSVLKLDGSSFDVYVLTSATVGDLKVAIETAFSHVPKK--GPSKISWSHVWGHFCLCF 76
Query: 124 QNQKLLDENSALQDCGVRNNSQVQFVPF-----VLSKGSGKHSKRR 164
QKL+ + + G+++ +V+F VLSKG + SK++
Sbjct: 77 GGQKLITDTDCIGSYGLKDGDEVRFKNHVSGNAVLSKGYSRKSKQK 122
>gi|116784054|gb|ABK23196.1| unknown [Picea sitchensis]
Length = 186
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 69/112 (61%), Gaps = 5/112 (4%)
Query: 65 AMRISILKLDGTSF--AVMNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLS 122
++R+ I ++D TSF +V +A+V +LK AI+ K + S + ISW HVW N+CL+
Sbjct: 28 SIRLCIFRMDNTSFDVSVPGTASVLELKKAIEDKFGN---SQMEEGKISWCHVWGNFCLT 84
Query: 123 HQNQKLLDENSALQDCGVRNNSQVQFVPFVLSKGSGKHSKRRKHRIFRGLSK 174
+++++L+++ S L G++++ ++ FV + S G+ RRKH F L K
Sbjct: 85 YEDRELVNDGSLLSSFGIKDSDELFFVRHMSSASQGEKLHRRKHSTFGVLKK 136
>gi|242004550|ref|XP_002423145.1| U11/U12 snRNP 25 kDa protein, putative [Pediculus humanus corporis]
gi|212506102|gb|EEB10407.1| U11/U12 snRNP 25 kDa protein, putative [Pediculus humanus corporis]
Length = 152
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 66/114 (57%), Gaps = 7/114 (6%)
Query: 36 LLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDGTSFAVMNS---ATVKDLKLA 92
L D L D+P TL +V+ I+L+ G ++ I+IL+ D ++ S TV DLK +
Sbjct: 31 LTQDSFLNDLPNGVTLEEVNNQIALQHGKSITINILREDKEKMPIIVSQAEGTVADLKKS 90
Query: 93 IKK----KVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRN 142
I+K K+ +++ + H+ ISWK++W Y L H ++ L D N L+D G++N
Sbjct: 91 IRKYITLKLKRSKKTKMRHKLISWKYIWKTYFLKHSDKILKDNNVKLKDIGIKN 144
>gi|225442930|ref|XP_002265295.1| PREDICTED: uncharacterized protein LOC100262712 [Vitis vinifera]
Length = 232
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 66/104 (63%), Gaps = 4/104 (3%)
Query: 67 RISILKLDGTSF--AVMNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQ 124
++SILKLDGTSF V +A V +LK AI++ + +N +ISW HVW ++CL ++
Sbjct: 50 KLSILKLDGTSFDVQVARNAKVAELKQAIEEVFS--LSTNEDEENISWSHVWGHFCLCYE 107
Query: 125 NQKLLDENSALQDCGVRNNSQVQFVPFVLSKGSGKHSKRRKHRI 168
QKL+++ + ++D G+++ Q+QF+ + + + K + +K +
Sbjct: 108 GQKLVNDKAHIRDVGIQDGDQLQFIQHITTDRNSKKKQPKKESV 151
>gi|297743473|emb|CBI36340.3| unnamed protein product [Vitis vinifera]
Length = 630
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 66/104 (63%), Gaps = 4/104 (3%)
Query: 67 RISILKLDGTSF--AVMNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQ 124
++SILKLDGTSF V +A V +LK AI++ + +N +ISW HVW ++CL ++
Sbjct: 50 KLSILKLDGTSFDVQVARNAKVAELKQAIEEVFS--LSTNEDEENISWSHVWGHFCLCYE 107
Query: 125 NQKLLDENSALQDCGVRNNSQVQFVPFVLSKGSGKHSKRRKHRI 168
QKL+++ + ++D G+++ Q+QF+ + + + K + +K +
Sbjct: 108 GQKLVNDKAHIRDVGIQDGDQLQFIQHITTDRNSKKKQPKKESV 151
>gi|449437400|ref|XP_004136480.1| PREDICTED: uncharacterized protein LOC101219460 [Cucumis sativus]
Length = 277
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 4/87 (4%)
Query: 65 AMRISILKLDGTSF--AVMNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLS 122
+ +S+LKLDG+SF V SATV +LK A++ + M Q G ISW HVW ++CL
Sbjct: 56 PLMLSVLKLDGSSFDIQVRRSATVAELKGAVELVFSHMPQHGPGK--ISWLHVWWHFCLC 113
Query: 123 HQNQKLLDENSALQDCGVRNNSQVQFV 149
+ QKL+D+ + G+++ Q+QFV
Sbjct: 114 YAGQKLVDDADYIASFGIKDGDQLQFV 140
>gi|449520183|ref|XP_004167113.1| PREDICTED: uncharacterized LOC101219460 [Cucumis sativus]
Length = 277
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 4/87 (4%)
Query: 65 AMRISILKLDGTSF--AVMNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLS 122
+ +S+LKLDG+SF V SATV +LK A++ + M Q G ISW HVW ++CL
Sbjct: 56 PLMLSVLKLDGSSFDIQVRRSATVAELKGAVELVFSHMPQHGPGK--ISWLHVWWHFCLC 113
Query: 123 HQNQKLLDENSALQDCGVRNNSQVQFV 149
+ QKL+D+ + G+++ Q+QFV
Sbjct: 114 YAGQKLVDDADYIASFGIKDGDQLQFV 140
>gi|255553225|ref|XP_002517655.1| conserved hypothetical protein [Ricinus communis]
gi|223543287|gb|EEF44819.1| conserved hypothetical protein [Ricinus communis]
Length = 274
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 57/83 (68%), Gaps = 4/83 (4%)
Query: 69 SILKLDGTSFAVM--NSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQ 126
++LKLDG+SF V +ATV +LK A+++ + + GH ISW VW ++CLS++NQ
Sbjct: 77 TVLKLDGSSFDVNIGRNATVAELKQAVEEIFSSSPEE--GHDKISWSLVWGHFCLSYENQ 134
Query: 127 KLLDENSALQDCGVRNNSQVQFV 149
KL+++ +++ G+++ Q+QF+
Sbjct: 135 KLINDKVCIRNFGIKDGDQLQFI 157
>gi|159163176|pdb|1V2Y|A Chain A, Solution Structure Of Mouse Hypothetical Gene (Riken Cdna
3300001g02) Product Homologous To Ubiquitin Fold
Length = 105
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 64 SAMRISILKLDG--TSFAVMNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCL 121
S M + + K+DG V+ +ATV DLK AI++ V ++ G +HISW +VW Y L
Sbjct: 6 SGMTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRYVQLKQEREGGVQHISWSYVWRTYHL 65
Query: 122 SHQNQKLLDENSALQDCGVRNNSQVQFV 149
+ +KL ++ L+D G+RN +V F+
Sbjct: 66 TSAGEKLTEDRKKLRDYGIRNRDEVSFI 93
>gi|449674293|ref|XP_002156888.2| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Hydra magnipapillata]
Length = 154
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 64/122 (52%), Gaps = 5/122 (4%)
Query: 33 LTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDGTSFA-----VMNSATVK 87
L LL+D +L D+P T D+ I+LE G A + + + T F V + +
Sbjct: 27 LQKLLNDALLKDLPNDVTSKDLKAKIALEKGRAFIVYLKRATETGFEDIPLIVDHKTKLI 86
Query: 88 DLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQ 147
DLKL +++ ++ + G +SWK+ W Y L H N+KL D + ++ G++ N+++
Sbjct: 87 DLKLNVQRTLSRKIKEEKGTSCLSWKYFWKTYWLVHNNEKLTDGSKTMKAYGIKENAEIM 146
Query: 148 FV 149
FV
Sbjct: 147 FV 148
>gi|388519459|gb|AFK47791.1| unknown [Lotus japonicus]
Length = 269
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 62/109 (56%), Gaps = 11/109 (10%)
Query: 50 TLSDVDTLI---SLEMG----SAMRISILKLDGTSF--AVMNSATVKDLKLAIKKKVNDM 100
T+S +DT+ S G R+S+LKLDG+SF V +A++ +LK A++ + M
Sbjct: 25 TISIIDTIFAKKSFLYGKLPSQPFRLSVLKLDGSSFDIQVSKTASIAELKDAVEAVFSHM 84
Query: 101 EQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQFV 149
+ G ISW HVW +CL + QKL+ E L++ G+++ ++ F+
Sbjct: 85 PEK--GPAKISWPHVWGQFCLCYDGQKLVTEEDYLRNYGIKDGDELHFM 131
>gi|356509914|ref|XP_003523687.1| PREDICTED: uncharacterized protein LOC100781177 [Glycine max]
Length = 259
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 6/101 (5%)
Query: 68 ISILKLDGTSF--AVMNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQN 125
+SILKLD +SF V N+ATV +LK A++ + Q G I W VW +CLS+Q
Sbjct: 39 LSILKLDASSFHVEVANAATVAELKQAVEAVFCRVPQKGPGK--ILWPLVWRQFCLSYQG 96
Query: 126 QKLLDENSALQDCGVRNNSQVQFVPFVLSKGS--GKHSKRR 164
QKL+ E+ ++D G+ + Q+ FV V S GK SK++
Sbjct: 97 QKLVSESDYIRDFGIEDGDQLHFVHHVSDTCSFEGKQSKKQ 137
>gi|441659753|ref|XP_003269146.2| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein,
partial [Nomascus leucogenys]
Length = 157
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Query: 29 LHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATV 86
L ++ DP+L D+P + TL +V++ I+LE G AM + + K+DG V+ SATV
Sbjct: 72 FQEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQSATV 131
Query: 87 KDLKLAIKKKVNDMEQSNLGHRHISW 112
DLK AI++ V ++ G +HISW
Sbjct: 132 LDLKKAIQRYVQLKQEREGGIQHISW 157
>gi|388521043|gb|AFK48583.1| unknown [Lotus japonicus]
Length = 220
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 62/109 (56%), Gaps = 11/109 (10%)
Query: 50 TLSDVDTLI---SLEMG----SAMRISILKLDGTSF--AVMNSATVKDLKLAIKKKVNDM 100
T+S +DT+ S G R+S+LKLDG+SF V +A++ +LK A++ + M
Sbjct: 25 TISIIDTIFAKKSFLYGKLPSQPFRLSVLKLDGSSFDIQVSKTASIAELKDAVEAVFSHM 84
Query: 101 EQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQFV 149
+ G ISW HVW +CL + QKL+ E L++ G+++ ++ F+
Sbjct: 85 PEK--GPAKISWPHVWGQFCLCYDGQKLVTEEDYLRNYGIKDGDELHFM 131
>gi|196010539|ref|XP_002115134.1| hypothetical protein TRIADDRAFT_58967 [Trichoplax adhaerens]
gi|190582517|gb|EDV22590.1| hypothetical protein TRIADDRAFT_58967 [Trichoplax adhaerens]
Length = 154
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 72/135 (53%), Gaps = 2/135 (1%)
Query: 27 ARLHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDGTSFAVM--NSA 84
A +++ + D +LA +P T+ +V++LI+L+ G AM +++ K AV+ +A
Sbjct: 14 AIFRNSIAEMTKDSLLASLPNDVTIDEVNSLIALDYGLAMTVTVCKDSRERIAVIVPQTA 73
Query: 85 TVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNS 144
T+K K A +++ + R I+WK+ W +Y L ++ KL ++S L D G+ N +
Sbjct: 74 TIKQFKKAFQRQTLLHLKRKGESRRINWKYYWKSYWLIYEGIKLEKDDSNLIDYGIGNGA 133
Query: 145 QVQFVPFVLSKGSGK 159
+ F + KG K
Sbjct: 134 MLTFAKRLQQKGRVK 148
>gi|296082049|emb|CBI21054.3| unnamed protein product [Vitis vinifera]
Length = 251
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 54/85 (63%), Gaps = 4/85 (4%)
Query: 65 AMRISILKLDGTSFA--VMNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLS 122
+++S+LKLDG+ F V ++TV +LK A++ + + + G ISW HVW ++CL
Sbjct: 44 PIKLSVLKLDGSCFQIEVTKTSTVAELKQAVEDAFSHLPKKGPGK--ISWLHVWGHFCLC 101
Query: 123 HQNQKLLDENSALQDCGVRNNSQVQ 147
+ +QKL+ E +++ G+++ QVQ
Sbjct: 102 YNDQKLVTETEYIKNYGIKDGDQVQ 126
>gi|356518246|ref|XP_003527790.1| PREDICTED: uncharacterized protein LOC100790105 [Glycine max]
Length = 258
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Query: 68 ISILKLDGTSF--AVMNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQN 125
+SILKLD +SF V N+ATV +LK A++ + + Q G I W VW +CL +Q
Sbjct: 42 LSILKLDASSFHVEVANAATVAELKQAVEAVFSHVPQKGPGK--ILWPLVWRQFCLCYQG 99
Query: 126 QKLLDENSALQDCGVRNNSQVQFVPFV 152
QKL+ E ++D G+++ Q+ FV V
Sbjct: 100 QKLVSEMDYIRDYGIKDGDQLHFVYHV 126
>gi|356563874|ref|XP_003550182.1| PREDICTED: uncharacterized protein LOC100820296 [Glycine max]
Length = 275
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 65 AMRISILKLDGTSF--AVMNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLS 122
+R+++LKLDG+ F V +ATV +LK A++ + + G ISW HVW +CL
Sbjct: 51 PLRLTVLKLDGSCFHIQVSKTATVAELKDAVEAVFSHVPHK--GPAKISWAHVWGQFCLC 108
Query: 123 HQNQKLLDENSALQDCGVRNNSQVQFV 149
+ QKL+ E L++ G+++ Q++F+
Sbjct: 109 YDGQKLVTEKDNLRNYGIKDGDQLRFI 135
>gi|440795556|gb|ELR16676.1| hypothetical protein ACA1_089240 [Acanthamoeba castellanii str.
Neff]
Length = 185
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 70/150 (46%), Gaps = 19/150 (12%)
Query: 9 AKEEEVEVGDYNSSTMKKARLHSTLTALLDDPILADVPK-KPTLSD-------------- 53
AK E + D NS A+ L DP+LAD P+ + L++
Sbjct: 4 AKREVAALHDRNSQLTDSAK-EVLFGHFLSDPVLADYPQLRHALTEEGRGKRKWAAQVEL 62
Query: 54 VDTLISLEMGSAMRISILKLDG--TSFAVMNSATVKDLKLAIKKKVNDMEQSNLGH-RHI 110
+D LI+ E+G A I +LK DG V + + +LK ++ V+ LG R I
Sbjct: 63 LDALIAQEVGEAFSIYVLKHDGKRIPLVVTYTTMLDELKRQLQLVVDHQTAERLGPTRRI 122
Query: 111 SWKHVWANYCLSHQNQKLLDENSALQDCGV 140
+WKHVW CL ++ ++LLD L D G+
Sbjct: 123 NWKHVWDRQCLMYEGRRLLDGKQLLCDAGL 152
>gi|449469242|ref|XP_004152330.1| PREDICTED: uncharacterized protein LOC101206096 [Cucumis sativus]
Length = 243
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
Query: 70 ILKLDGTSFAVMNS--ATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQK 127
+LKLDG+ F + S +TV DLK AI+K + S H I+W +W ++CL ++ +K
Sbjct: 60 VLKLDGSVFGIRVSRNSTVADLKRAIEKVFDSPGGSE--HYKITWSLIWGHFCLCYEGEK 117
Query: 128 LLDENSALQDCGVRNNSQVQFV 149
L+D+ + ++ G+++ Q+QF+
Sbjct: 118 LIDDKTCIKGYGIKDGDQLQFI 139
>gi|340371622|ref|XP_003384344.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Amphimedon queenslandica]
Length = 143
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 62/115 (53%), Gaps = 2/115 (1%)
Query: 36 LLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDGTSFA--VMNSATVKDLKLAI 93
+L DP L D+ + +L +V + ++LE G AM +++ KLD TSF V+ ATV +L+ ++
Sbjct: 20 ILKDPFLKDLSPEISLDEVQSRLALEQGRAMTLNVQKLDNTSFPVIVLQGATVHELRKSV 79
Query: 94 KKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQF 148
+ + + +SW +VW Y L + +L + L + G+ NN + +
Sbjct: 80 ENETVRRLKKEGRTTFVSWGYVWKTYSLFYGQHRLSKLDDKLANYGISNNCDIHW 134
>gi|255572471|ref|XP_002527170.1| conserved hypothetical protein [Ricinus communis]
gi|223533435|gb|EEF35183.1| conserved hypothetical protein [Ricinus communis]
Length = 114
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 58/99 (58%), Gaps = 3/99 (3%)
Query: 49 PTLSDVDTLISLEMGSAMRISILKLDGTSFAVMNS--ATVKDLKLAIKKKVNDMEQSNLG 106
P+L+ V R+S+LKL+G+ F V S ATV +LK A++ + ++
Sbjct: 6 PSLTCVSFAYERLPQEQFRLSVLKLNGSFFEVQVSRMATVGELKQAVENVFTHSPEDDM- 64
Query: 107 HRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQ 145
H +ISW HVW+++CL ++ QKL+ + + +Q G+++ Q
Sbjct: 65 HMNISWWHVWSHFCLCYKGQKLIHDKAYIQSFGIKDGDQ 103
>gi|149052202|gb|EDM04019.1| similar to chromosome 16 open reading frame 33; minus -99 protein
(predicted), isoform CRA_a [Rattus norvegicus]
Length = 95
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 36 LLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATVKDLKLAI 93
++ DP+L D+P + TL +V++ I+LE G AM + + K+DG V+ +ATV DLK AI
Sbjct: 2 VVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATVLDLKKAI 61
Query: 94 KKKVNDMEQSNLGHRHISWKHVW 116
++ V ++ G +HIS +V
Sbjct: 62 QRYVQLKQEREGGVQHISCTYVL 84
>gi|307182451|gb|EFN69686.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Camponotus
floridanus]
Length = 184
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 81/150 (54%), Gaps = 6/150 (4%)
Query: 4 SSSCGAKEEEVEVGDYNSSTMKKARLHSTLTALL-DDPILADVPKKPTLSDVDTLISLEM 62
SC KE+ V + +K R+ T+ ++ +DP+L+ +P T+ ++ + I++
Sbjct: 24 EESCAEKEKSETVRFSHQELIKLTRM--TIDNMIKNDPLLSGLPSDVTIEEIKSQIAVAQ 81
Query: 63 GSAMRISILKLDGTSFAVM---NSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANY 119
G A+ + + + + AV+ ++ TV DLK AIK+ +N + + ISWKHVW Y
Sbjct: 82 GQAITLFLNRGELPKLAVVVPPHNTTVLDLKKAIKRHMNLSLKREDVKKKISWKHVWKKY 141
Query: 120 CLSHQNQKLLDENSALQDCGVRNNSQVQFV 149
L ++ +L ++N ++ + N +++ FV
Sbjct: 142 HLCFEDIRLSNDNENIKAYNITNKAELHFV 171
>gi|350418490|ref|XP_003491874.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Bombus impatiens]
Length = 180
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 62/114 (54%), Gaps = 3/114 (2%)
Query: 39 DPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDGTSFAVM---NSATVKDLKLAIKK 95
DP+L+ +P T+ ++ I++ G A+ + + + + ++ + TV DLK AIK+
Sbjct: 54 DPLLSGLPADVTIEELKAQIAVAQGQAITLYLNRGELPKLGIVVPPHHTTVLDLKKAIKR 113
Query: 96 KVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQFV 149
N + + ISWKH+W Y L +N +L+D+N ++ G+ N ++ +V
Sbjct: 114 HTNLSLKREKVKKKISWKHIWKKYHLCFENVRLIDDNENIKAYGITNKVELHYV 167
>gi|328782996|ref|XP_003250223.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Apis mellifera]
Length = 175
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 64/114 (56%), Gaps = 3/114 (2%)
Query: 39 DPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDGTSFAVM---NSATVKDLKLAIKK 95
DP+L+ +P T+ ++ I++ G A+ + + + + ++ ++ TV DLK AIK+
Sbjct: 49 DPLLSGLPTDVTIEELKAQIAVAQGQAITLYLNRGELPKLGIVVPPHNTTVLDLKKAIKR 108
Query: 96 KVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQFV 149
N + + ISWKH+W Y L +N KL+++N ++ G+ N +++ ++
Sbjct: 109 HTNLALKREKIKKKISWKHIWKKYHLCFENIKLINDNENIKTYGITNKAELYYL 162
>gi|340722517|ref|XP_003399651.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Bombus terrestris]
Length = 180
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 63/114 (55%), Gaps = 3/114 (2%)
Query: 39 DPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDGTSFAVM---NSATVKDLKLAIKK 95
DP+L+ +P T+ ++ I++ G A+ + + + + ++ + TV DLK AIK+
Sbjct: 54 DPLLSGLPADVTIEELKAQIAVAQGQAITLYLNRGELPKLGIVVPPHHTTVLDLKKAIKR 113
Query: 96 KVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQFV 149
N + + ISWKH+W Y L +N +L+++N ++ G+ N +++ +V
Sbjct: 114 HTNLSLKREKVKKKISWKHIWKKYHLCFENVRLINDNENIKAYGITNKAELHYV 167
>gi|156545358|ref|XP_001606078.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Nasonia vitripennis]
Length = 171
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 63/114 (55%), Gaps = 3/114 (2%)
Query: 39 DPILADVPKKPTLSDVDTLISLEMGSAMRISILK--LDGTSFAVMNSAT-VKDLKLAIKK 95
DPI +++P PT+ ++ I++ G ++ + + + L S V + T V +LK A+K+
Sbjct: 48 DPIFSNLPLDPTIDEIRAQIAVARGQSIELFLERGPLPTLSIVVPSKNTSVLELKKAVKR 107
Query: 96 KVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQFV 149
N + + ISWKHVW Y LS N L D+ +++ G+R+ + +++V
Sbjct: 108 HTNLALKREKVTKKISWKHVWKKYYLSFDNVTLADDKEDIRNYGIRSKAVLKYV 161
>gi|242064292|ref|XP_002453435.1| hypothetical protein SORBIDRAFT_04g006000 [Sorghum bicolor]
gi|241933266|gb|EES06411.1| hypothetical protein SORBIDRAFT_04g006000 [Sorghum bicolor]
Length = 274
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 53/86 (61%), Gaps = 4/86 (4%)
Query: 66 MRISILKLDGTSF--AVMNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSH 123
+R+++ KLD + F + SATV +LK+AI+ +D+ + ISW HVW+++CL
Sbjct: 59 LRLTVQKLDDSFFDIEIARSATVWELKVAIENLFSDLYDD--AQKTISWNHVWSHFCLCF 116
Query: 124 QNQKLLDENSALQDCGVRNNSQVQFV 149
+++++ D+ + L+ G+R+ + F
Sbjct: 117 KDERMTDDKATLRGFGIRDGDVLHFA 142
>gi|15220048|ref|NP_178123.1| ubiquitin-like domain-containing protein kinase [Arabidopsis
thaliana]
gi|54261721|gb|AAV31164.1| At1g80060 [Arabidopsis thaliana]
gi|58331795|gb|AAW70395.1| At1g80060 [Arabidopsis thaliana]
gi|332198231|gb|AEE36352.1| ubiquitin-like domain-containing protein kinase [Arabidopsis
thaliana]
Length = 243
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 76/139 (54%), Gaps = 19/139 (13%)
Query: 22 STMKKARLHSTLTALLDDPILADVPKKPTLSDVDTL-------ISLEMGSAMRISILKLD 74
S ++ R L +L+D L+ L+D ++ + L +++S++KL+
Sbjct: 6 SPVRDGRRSGGLRSLIDPRFLSSF----ALNDGGSISGRRSSYLKLPPQGRIKLSVVKLN 61
Query: 75 GTSF--AVMNSATVKDLKLAIKK--KVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLD 130
G+ F V +V +LK A+++ ++ +E GH ISW HVW ++CL +++Q+L++
Sbjct: 62 GSLFDVEVAKDCSVAELKRAVEQVFTISPLE----GHGMISWSHVWGHFCLCYRDQRLVN 117
Query: 131 ENSALQDCGVRNNSQVQFV 149
+ ++++ G+ + Q+ FV
Sbjct: 118 DKTSIRYLGLNDGDQLHFV 136
>gi|148691818|gb|EDL23765.1| RIKEN cDNA 3300001G02, isoform CRA_b [Mus musculus]
Length = 119
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 36 LLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDG--TSFAVMNSATVKDLKLAI 93
++ DP+L D+P + TL +V++ I+LE G AM + + K+DG V+ +ATV DLK AI
Sbjct: 2 VVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATVLDLKKAI 61
Query: 94 KKKVNDMEQSNLGHRHIS 111
++ V ++ G +HIS
Sbjct: 62 QRYVQLKQEREGGVQHIS 79
>gi|307200838|gb|EFN80891.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein
[Harpegnathos saltator]
Length = 177
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 68/115 (59%), Gaps = 5/115 (4%)
Query: 39 DPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDGTSFAVM---NSATVKDLKLAIKK 95
DP+L+ +P T+ ++ + I++ G A+ + + + + AV+ + TV DLK AIK+
Sbjct: 52 DPLLSGLPSDVTIEELKSQIAVAQGQAITLFLNRGELPKLAVVVPPHDTTVLDLKKAIKR 111
Query: 96 KVN-DMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQFV 149
++ +++ N+ + ISWKH+W Y L ++ KL + N ++ G+ N +++ F+
Sbjct: 112 HMSLSLKRENIKKK-ISWKHIWKKYHLCFEHIKLANNNENIKTYGIANKAELHFM 165
>gi|357138938|ref|XP_003571043.1| PREDICTED: uncharacterized protein LOC100841643 [Brachypodium
distachyon]
Length = 320
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 23/114 (20%)
Query: 52 SDVDTLISLEMGSA-----------MRISILKLDGTSFAVM--NSATVKDLKLAIKKKV- 97
+D D + +L G A +R++I KLD + F V SA V +LK AI+
Sbjct: 80 ADADCIGALACGPASFSYHRLPEPRLRLTIRKLDDSYFDVQIARSAAVWELKAAIEAVFI 139
Query: 98 ---NDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQF 148
DM+ + I+W+HVW+++CL +++KL D+ + L+ G+++ ++ F
Sbjct: 140 ALFYDMDNA------ITWQHVWSHFCLCFKDEKLTDDRATLRAFGIKDGDELHF 187
>gi|383858160|ref|XP_003704570.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
protein-like [Megachile rotundata]
Length = 182
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 67/115 (58%), Gaps = 5/115 (4%)
Query: 39 DPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDGTSFAVM---NSATVKDLKLAIKK 95
DP+ + +P T+ ++ + I++ G A+ + + + + ++ ++ +V +LK AIK+
Sbjct: 56 DPLFSGLPSDVTVEELKSQIAVAQGQAITLYLNRGELPKLGIVVPPHNTSVLNLKKAIKR 115
Query: 96 KVN-DMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQFV 149
N +++ N+ + ISWKHVW Y L N KL+++N ++ G+ N +++ +V
Sbjct: 116 HTNLSLKRENVKKK-ISWKHVWKKYYLCFDNVKLVNDNENIKAYGITNKAELYYV 169
>gi|332021112|gb|EGI61499.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Acromyrmex
echinatior]
Length = 176
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 67/115 (58%), Gaps = 5/115 (4%)
Query: 39 DPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDGTSFAVM---NSATVKDLKLAIKK 95
+P+L+ +P T+ ++ + I++ G A+ + + + + AV+ ++ TV DLK AIK+
Sbjct: 51 EPLLSGLPSDVTIEELKSQIAVAQGQAITLFLNRGELPKLAVVVPPHNTTVLDLKKAIKR 110
Query: 96 KVN-DMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQFV 149
N +++ N+ + ISWKHVW Y L + +L ++N ++ G+ N ++ F+
Sbjct: 111 HTNLSLKRENVKKK-ISWKHVWKKYHLCFGDIRLSNDNENIKAYGITNKIELHFI 164
>gi|259490128|ref|NP_001159154.1| hypothetical protein [Zea mays]
gi|223942319|gb|ACN25243.1| unknown [Zea mays]
gi|413935984|gb|AFW70535.1| hypothetical protein ZEAMMB73_861622 [Zea mays]
Length = 266
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Query: 66 MRISILKLDGTSF--AVMNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSH 123
+R+++ KLD + F + SATV +LK+ I+ + + + ISW HVW+++CL
Sbjct: 56 LRLTVQKLDDSFFDIEIARSATVWELKVTIENLFSALYDDT--QKTISWNHVWSHFCLCF 113
Query: 124 QNQKLLDENSALQDCGVRNNSQVQFV 149
++++L D+ + L+ G+R+ + F
Sbjct: 114 KDERLTDDKATLRGFGIRDGDVLHFA 139
>gi|326500444|dbj|BAK06311.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 304
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 55/90 (61%), Gaps = 12/90 (13%)
Query: 66 MRISILKLDGTSFAV--MNSATVKDLKLAIKKKV----NDMEQSNLGHRHISWKHVWANY 119
+R+++ KLD + F V SA V +LK AI+ +DME + ++W+HVW+++
Sbjct: 88 LRLTVRKLDDSYFDVRIARSAAVWELKAAIQGVFVALYHDMENA------VTWQHVWSHF 141
Query: 120 CLSHQNQKLLDENSALQDCGVRNNSQVQFV 149
CL +++K++D+ + L+ G+++ ++ F
Sbjct: 142 CLCFKDEKMMDDKATLRAFGIKDGDELHFA 171
>gi|297839931|ref|XP_002887847.1| hypothetical protein ARALYDRAFT_895992 [Arabidopsis lyrata subsp.
lyrata]
gi|297333688|gb|EFH64106.1| hypothetical protein ARALYDRAFT_895992 [Arabidopsis lyrata subsp.
lyrata]
Length = 243
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 61/98 (62%), Gaps = 8/98 (8%)
Query: 56 TLISLEMGSAMRISILKLDGTSF--AVMNSATVKDLKLAIKK--KVNDMEQSNLGHRHIS 111
+ + L +++S++KL+G+ F V +V +LK A+++ ++ +E H IS
Sbjct: 43 SYLKLPPQGRIKLSVVKLNGSLFDVEVAKDCSVAELKRAVEQVFTISPLE----AHGMIS 98
Query: 112 WKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQFV 149
W HVW ++CLS+++Q+L+++ ++++ + + Q++FV
Sbjct: 99 WSHVWGHFCLSYRDQRLVNDKTSIRYLALSDGDQLRFV 136
>gi|222622336|gb|EEE56468.1| hypothetical protein OsJ_05682 [Oryza sativa Japonica Group]
Length = 370
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Query: 69 SILKLDGTSFAVM--NSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQ 126
++ KLD + F V SA V +LK AI+ + ++ ISW+HVW+++CL +++
Sbjct: 51 TVRKLDDSYFDVQIARSAAVWELKAAIEDVFAAL-YDETDNKAISWQHVWSHFCLCFKDE 109
Query: 127 KLLDENSALQDCGVRNNSQVQFV 149
KL D+ + L+ G+R+ +V F
Sbjct: 110 KLTDDKATLRAFGIRDGDEVHFA 132
>gi|115444711|ref|NP_001046135.1| Os02g0188500 [Oryza sativa Japonica Group]
gi|46389904|dbj|BAD15525.1| unknown protein [Oryza sativa Japonica Group]
gi|113535666|dbj|BAF08049.1| Os02g0188500 [Oryza sativa Japonica Group]
gi|215678897|dbj|BAG95334.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 324
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Query: 69 SILKLDGTSFAVM--NSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQ 126
++ KLD + F V SA V +LK AI+ + ++ ISW+HVW+++CL +++
Sbjct: 117 TVRKLDDSYFDVQIARSAAVWELKAAIEDVFAALYDET-DNKAISWQHVWSHFCLCFKDE 175
Query: 127 KLLDENSALQDCGVRNNSQVQFV 149
KL D+ + L+ G+R+ +V F
Sbjct: 176 KLTDDKATLRAFGIRDGDEVHFA 198
>gi|218190221|gb|EEC72648.1| hypothetical protein OsI_06171 [Oryza sativa Indica Group]
Length = 360
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Query: 69 SILKLDGTSFAVM--NSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQ 126
++ KLD + F V SA V +LK AI+ + ++ ISW+HVW+++CL +++
Sbjct: 51 TVRKLDDSYFDVQIARSAAVWELKAAIEDVFAAL-YDETDNKAISWQHVWSHFCLCFKDE 109
Query: 127 KLLDENSALQDCGVRNNSQVQFV 149
KL D+ + L+ G+R+ ++ F
Sbjct: 110 KLTDDKATLRAFGIRDGDELHFA 132
>gi|147846512|emb|CAN81657.1| hypothetical protein VITISV_042595 [Vitis vinifera]
Length = 283
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 52/92 (56%), Gaps = 11/92 (11%)
Query: 65 AMRISILKLDGTSFA--VMNSATVKDLKLAIKKKVNDMEQSNLG---------HRHISWK 113
+++S+LKLDG+ F V ++TV +LK A++ + + + G + HI
Sbjct: 44 PIKLSVLKLDGSCFQIEVTKTSTVAELKQAVEDAFSHLPKKGPGKISWYFHCRYSHILGL 103
Query: 114 HVWANYCLSHQNQKLLDENSALQDCGVRNNSQ 145
HVW ++CL + +QKL+ E +++ G+++ Q
Sbjct: 104 HVWGHFCLCYNDQKLVTETEYIKNYGIKDGDQ 135
>gi|357604352|gb|EHJ64146.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Danaus
plexippus]
Length = 150
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 64/113 (56%), Gaps = 4/113 (3%)
Query: 39 DPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDGTSFAVM--NSATVKDLKLAIKKK 96
D +L+D+P L ++ + ++E G ++ + + + D V+ ++TV++LK A+ +
Sbjct: 31 DSLLSDLPSDIILEEILSQTAVEHGQSITVIVSREDEQPLKVIVPQNSTVRELKKAVARH 90
Query: 97 VNDMEQSNLGHR-HISWKHVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQF 148
++ Q +G+R ISW+++W Y L++ + L ++S + D GV N + F
Sbjct: 91 F-ELYQQRMGNRVKISWRYIWKTYSLNYDSLTLDKDDSKITDYGVTNKVILTF 142
>gi|449475763|ref|XP_004176691.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
[Taeniopygia guttata]
Length = 76
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 41/69 (59%)
Query: 82 NSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCGVR 141
+ + V LK A ++ ++ + G +H+SW+++W Y L++ +KL D+ L++ G+R
Sbjct: 4 HHSAVTVLKKAFRRHIHLSQAWQGGLQHLSWRYIWRTYHLTYNGEKLADDRKKLREYGIR 63
Query: 142 NNSQVQFVP 150
N +V F+
Sbjct: 64 NRDEVSFIK 72
>gi|339238065|ref|XP_003380587.1| putative STAS domain protein [Trichinella spiralis]
gi|316976515|gb|EFV59800.1| putative STAS domain protein [Trichinella spiralis]
Length = 900
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 38 DDPILAD-VPKKPTLSDVDTLISLEMGSAMRISILKLDGTSFAVM--NSATVKDLKLAIK 94
+DP L + + K T+ ++ I++ +++I I + DG + + +ATVK+LK I+
Sbjct: 665 NDPFLKNSLSSKVTIDELRQEIAILQNGSLKIFIRRFDGKTIEIDIDKNATVKELKKVIQ 724
Query: 95 KKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCG 139
+ + + +HI+W +VW Y L QKL D + + G
Sbjct: 725 RTFSRKLYNESSIKHINWAYVWRTYWLRFNQQKLTDNRAHIYRTG 769
>gi|357466173|ref|XP_003603371.1| hypothetical protein MTR_3g106830 [Medicago truncatula]
gi|355492419|gb|AES73622.1| hypothetical protein MTR_3g106830 [Medicago truncatula]
Length = 302
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Query: 80 VMNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDENSALQDCG 139
V +ATV LK A++ + ISW VW +CL ++ QKL+ E L+D G
Sbjct: 89 VAKTATVAVLKQAVEAAFRHKPEK------ISWPLVWGQFCLCYEGQKLVTETDYLRDYG 142
Query: 140 VRNNSQVQ 147
+++ QV+
Sbjct: 143 IKDGDQVR 150
>gi|358253653|dbj|GAA53569.1| hypothetical protein CLF_110537 [Clonorchis sinensis]
Length = 234
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 67/161 (41%), Gaps = 55/161 (34%)
Query: 44 DVPKKPTLSDVDTLISLEMGSAMRISILKLDGTSFAVMNSAT--VKDLKLAIK------- 94
D+P+ P+ VD L+ L G AM++++L+ D V+ S T V++L+ A++
Sbjct: 68 DLPRLPSAKHVDDLLRLHFGQAMKLTLLRGDDVELPVVVSITACVRELQRAVQFVTTEYL 127
Query: 95 -----------------------------KKVNDMEQSNL--GHRHISWKHVWANYCLSH 123
K +D++ S L + ISWKHVW CL+
Sbjct: 128 NQLTRSMGIWGSPGQRPSQQVVQNLLKTNNKTDDVKFSLLFTSTKFISWKHVWKTKCLAL 187
Query: 124 QNQ--------------KLLDENSALQD-CGVRNNSQVQFV 149
N ++ D N+ LQD VRN + + FV
Sbjct: 188 VNPHAVHVQASAPTILCRMDDLNAQLQDRYHVRNGAVITFV 228
>gi|429327265|gb|AFZ79025.1| ubiquitin family member protein [Babesia equi]
Length = 186
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 20/137 (14%)
Query: 13 EVEVGDYNSSTMKKARLHSTLTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILK 72
+V+ G N +L+S L D+ + ++ + + +EM MRISI
Sbjct: 53 DVKCGLSNLGYRGNIKLYSNRRQLFDNEVYSESEHS------NIAMCIEMRGGMRISIET 106
Query: 73 LDGTSFAVMNSATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQKLLDEN 132
+ G S + AT + L +KKK+++ + L + + + N KLL++N
Sbjct: 107 MTGKSVQI--EATENETVLDVKKKLSEKQNIPLEQQRMIY------------NGKLLEDN 152
Query: 133 SALQDCGVRNNSQVQFV 149
L + ++NN+ +Q V
Sbjct: 153 KTLAEYNIKNNAVIQLV 169
>gi|340386726|ref|XP_003391859.1| PREDICTED: hypothetical protein LOC100639047 [Amphimedon
queenslandica]
Length = 368
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 17/99 (17%)
Query: 64 SAMRISILKLDGTS--FAVMNSATVKDLKLAI--KKKVNDMEQSNLGHRHISWKHVWANY 119
+++ I++ L+G S F+V ATV LK +I K ++ Q ++ N
Sbjct: 81 NSITITVQFLNGQSHKFSVDPRATVYGLKWSIFKSKGFDEYSQYDVN-----------NI 129
Query: 120 CLSHQNQKLLDENSALQDCGVRNNSQVQFVPFVLSKGSG 158
L+ ++L D++ L DCG++N S VQF V +G+G
Sbjct: 130 VLTFGRKELNDDDHLLTDCGIKNGSTVQFA--VKLRGAG 166
>gi|449527599|ref|XP_004170797.1| PREDICTED: uncharacterized LOC101206096 [Cucumis sativus]
Length = 230
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 17/82 (20%)
Query: 70 ILKLDGTSFAVMNS--ATVKDLKLAIKKKVNDMEQSNLGHRHISWKHVWANYCLSHQNQK 127
+LKLDG+ F + S +TV DLK AI+K + N H +K
Sbjct: 60 VLKLDGSVFGIRVSRNSTVADLKRAIEKVFDSPGGVNTTRLH---------------GEK 104
Query: 128 LLDENSALQDCGVRNNSQVQFV 149
L+D+ + ++ G+++ Q+QF+
Sbjct: 105 LIDDKTCIKGYGIKDGDQLQFI 126
>gi|119187205|ref|XP_001244209.1| hypothetical protein CIMG_03650 [Coccidioides immitis RS]
gi|392870926|gb|EAS32772.2| hypothetical protein CIMG_03650 [Coccidioides immitis RS]
Length = 417
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 13/90 (14%)
Query: 33 LTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLD-GTSFAVMNSATVKDLKL 91
L ++LD P+ + VP +P L +++ GS+ I+ LD + V N T+ D
Sbjct: 74 LRSILDHPLFSTVPHRPALRQTQ---NVQSGSSTEDPIVALDRAIASGVANINTIHDCLR 130
Query: 92 AIKKKVND---------MEQSNLGHRHISW 112
+ ++N M+ S +GHR ISW
Sbjct: 131 RHRLQINGLPRAEMRARMKNSKIGHRIISW 160
>gi|328768172|gb|EGF78219.1| hypothetical protein BATDEDRAFT_91060 [Batrachochytrium
dendrobatidis JAM81]
Length = 265
Score = 36.2 bits (82), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 27/152 (17%)
Query: 24 MKKARLHSTLTALLDDPILAD------VPKKPTLSDVDTLISLEMGSAMRISILK--LDG 75
+K + + +T++ +D I++D + + +L D+ TL++ + + +++ + L
Sbjct: 11 IKMSEISDRITSMYND-IISDHRFNGEIQPETSLDDLRTLLASKQNKSWHLTLDRGHLQS 69
Query: 76 TSFAVMNSATVKDLKLAIKKKVN--DMEQSNL-GHRHISWKHVWANYCLS-HQNQKLLDE 131
V V+DLK ++ M SNL R I+W+ +W + L+ + LLD+
Sbjct: 70 LDLVVRPIQCVRDLKRIVRAAWTRQQMVSSNLVRQRCINWRGIWTTHRLALTTDSSLLDQ 129
Query: 132 NSA--------------LQDCGVRNNSQVQFV 149
++A L+DCGV + S ++FV
Sbjct: 130 STAGSRILKILSRDLDKLKDCGVSDGSHLRFV 161
>gi|303317196|ref|XP_003068600.1| hypothetical protein CPC735_006270 [Coccidioides posadasii C735
delta SOWgp]
gi|240108281|gb|EER26455.1| hypothetical protein CPC735_006270 [Coccidioides posadasii C735
delta SOWgp]
gi|320038520|gb|EFW20455.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 416
Score = 35.8 bits (81), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 13/90 (14%)
Query: 33 LTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLD-GTSFAVMNSATVKDLKL 91
L ++LD P+ + VP +P L + S GS+ I+ LD + V N T+ D
Sbjct: 73 LRSILDHPLFSTVPHRPALRQTQNVQS---GSSTEDPIVALDRAIASGVANINTLHDCLR 129
Query: 92 AIKKKVND---------MEQSNLGHRHISW 112
+ ++N M+ S +GHR +SW
Sbjct: 130 RHRLQINGLPRAEMRARMKNSKIGHRIVSW 159
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.128 0.362
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,524,758,223
Number of Sequences: 23463169
Number of extensions: 90433697
Number of successful extensions: 220573
Number of sequences better than 100.0: 167
Number of HSP's better than 100.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 220276
Number of HSP's gapped (non-prelim): 172
length of query: 176
length of database: 8,064,228,071
effective HSP length: 132
effective length of query: 44
effective length of database: 9,262,057,059
effective search space: 407530510596
effective search space used: 407530510596
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 71 (32.0 bits)