BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>030500
MALMASSNGYCYYNYKKKYNKRYNCSTVPRITLSQSQEPRDQTSRREIILRSSEVAVIGA
IFNLSGKKPEYLGVQKNQQALALCPATKNCISTAENISDLTHYAPPWNYNRGRKKPVSRE
VAMEELLQVIKSTKPDRFTPRLVEKKDDYVHVEYESPVLGVGLAHHTFVQLFFHQA

High Scoring Gene Products

Symbol, full name Information P value
AT3G60810 protein from Arabidopsis thaliana 1.8e-48

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  030500
        (176 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2101826 - symbol:AT3G60810 "AT3G60810" species...   506  1.8e-48   1


>TAIR|locus:2101826 [details] [associations]
            symbol:AT3G60810 "AT3G60810" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 EMBL:AL162295 UniGene:At.20500
            UniGene:At.48789 EMBL:BT029375 EMBL:AK226454 IPI:IPI00549065
            PIR:T47892 RefSeq:NP_191640.1 PRIDE:Q9LZY2
            EnsemblPlants:AT3G60810.1 GeneID:825252 KEGG:ath:AT3G60810
            TAIR:At3g60810 HOGENOM:HOG000149081 InParanoid:Q9LZY2 OMA:HYAPPWN
            PhylomeDB:Q9LZY2 ProtClustDB:CLSN2685214 Genevestigator:Q9LZY2
            InterPro:IPR010865 Pfam:PF07386 PIRSF:PIRSF026426 Uniprot:Q9LZY2
        Length = 214

 Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
 Identities = 96/128 (75%), Positives = 112/128 (87%)

Query:    34 SQSQEPRDQTSRREIILRSSEVAVIGAIFNLSGKKPEYLGVQKNQQALALCPATKNCIST 93
             S  + P+    RR+IILRSSE+A+IGAIF LSGKKP+YLGVQKN++ LALCPAT NCIST
Sbjct:    35 SYDKHPK-LIGRRDIILRSSELAMIGAIFQLSGKKPDYLGVQKNER-LALCPATNNCIST 92

Query:    94 AENISDLTHYAPPWNYNRGRKKPVSREVAMEELLQVIKSTKPDRFTPRLVEKKDDYVHVE 153
             +ENISD  HYAPPWNYN GRK PV+R+VAM+ELL VIKS KPD+FTPR+VEKKDDYVHVE
Sbjct:    93 SENISDRVHYAPPWNYNGGRKTPVNRQVAMKELLNVIKSVKPDKFTPRIVEKKDDYVHVE 152

Query:   154 YESPVLGV 161
             YESP+LG+
Sbjct:   153 YESPILGL 160


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.131   0.378    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      176       159   0.00091  106 3  11 22  0.37    32
                                                     30  0.43    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  584 (62 KB)
  Total size of DFA:  138 KB (2086 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.97u 0.13s 15.10t   Elapsed:  00:00:01
  Total cpu time:  14.98u 0.13s 15.11t   Elapsed:  00:00:01
  Start:  Sat May 11 03:28:37 2013   End:  Sat May 11 03:28:38 2013

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