BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030503
(176 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GW64|PTHC_ARATH Peptidyl-tRNA hydrolase, chloroplastic OS=Arabidopsis thaliana
GN=At1g18440 PE=2 SV=2
Length = 288
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/103 (76%), Positives = 91/103 (88%), Gaps = 1/103 (0%)
Query: 61 ESLVSPKPKQQQ-QHPWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAH 119
++L S KPK Q PWLIVGLGNPGK+Y GTRHNVGFEMVDA+A+AEGIS+++VNFKA
Sbjct: 79 QALPSSKPKSPPLQLPWLIVGLGNPGKKYQGTRHNVGFEMVDALADAEGISMNTVNFKAL 138
Query: 120 FGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLV 162
FGKG IGN+P+MLAKPQTFMN SG+SVG IVS+YKIPLKQVLV
Sbjct: 139 FGKGVIGNIPIMLAKPQTFMNLSGESVGQIVSFYKIPLKQVLV 181
>sp|Q5N9Q7|PTHM_ORYSJ Peptidyl-tRNA hydrolase, mitochondrial OS=Oryza sativa subsp.
japonica GN=Os01g0693900 PE=2 SV=1
Length = 250
Score = 149 bits (376), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 69/88 (78%), Positives = 77/88 (87%)
Query: 75 PWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAK 134
PWL VGLGNPGK Y GTRHNVGFEM+D IAEAEGIS+SS+ FKA GKG IG+ P+MLAK
Sbjct: 55 PWLFVGLGNPGKVYQGTRHNVGFEMIDVIAEAEGISLSSMQFKAMVGKGRIGDAPIMLAK 114
Query: 135 PQTFMNASGQSVGSIVSYYKIPLKQVLV 162
PQTFMNASG+SVG +VSY+KIPL QVLV
Sbjct: 115 PQTFMNASGESVGQLVSYFKIPLNQVLV 142
>sp|Q6NLS8|PTHM_ARATH Peptidyl-tRNA hydrolase, mitochondrial OS=Arabidopsis thaliana
GN=At5g19830 PE=2 SV=1
Length = 219
Score = 127 bits (320), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 72/88 (81%)
Query: 75 PWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAK 134
PWL +GLGNPG +Y GTRHN+GFEM+D AE+ GI ++ VNFKA G+GF+ ++PV+LAK
Sbjct: 18 PWLFLGLGNPGDKYKGTRHNIGFEMIDVFAESVGIQMNLVNFKAIMGQGFVADLPVILAK 77
Query: 135 PQTFMNASGQSVGSIVSYYKIPLKQVLV 162
PQT+MN SG+S G + +YYK+PL +VLV
Sbjct: 78 PQTYMNLSGESSGPLAAYYKLPLNRVLV 105
>sp|Q5ZCL8|CRS2_ORYSJ Chloroplastic group IIB intron splicing facilitator CRS2,
chloroplastic OS=Oryza sativa subsp. japonica
GN=Os01g0132800 PE=2 SV=1
Length = 259
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 87/133 (65%), Gaps = 1/133 (0%)
Query: 30 SPLCCWGRRTRMSRSPSNSTIRNFSSSISNEESLVSPKPKQQQQHPWLIVGLGNPGKQYN 89
SP C RR +S + + I+ S+ P + + PWLI GLGNPG +Y+
Sbjct: 20 SPEPCRRRRLLLS-AAAPLRRTRLRRRIAVVASVPDPAARPAEYTPWLIAGLGNPGSKYH 78
Query: 90 GTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSI 149
GTRHNVGFEMVD IA EGI+++++ K+ G G IG VPV+L KPQ+++N SG+++G +
Sbjct: 79 GTRHNVGFEMVDRIARDEGITMNTIQSKSLLGIGSIGEVPVLLVKPQSYINYSGEAIGPL 138
Query: 150 VSYYKIPLKQVLV 162
+YY++PL+ +LV
Sbjct: 139 AAYYQVPLRHILV 151
>sp|Q10LI6|CRS2L_ORYSJ CRS2-like protein, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os03g0347800 PE=2 SV=1
Length = 186
Score = 123 bits (309), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 73/89 (82%)
Query: 74 HPWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLA 133
+PWL VGLGNPG++Y TRHNVGF+M+D A+++GIS++ FKA FG+G + VPV+LA
Sbjct: 59 NPWLFVGLGNPGEKYQCTRHNVGFDMIDMFAQSQGISLTRHPFKALFGEGMVEGVPVLLA 118
Query: 134 KPQTFMNASGQSVGSIVSYYKIPLKQVLV 162
KPQT+MN SG+SVG + +YYK+PL +VLV
Sbjct: 119 KPQTYMNLSGESVGPLAAYYKLPLNRVLV 147
>sp|Q9LF14|CRS2B_ARATH Chloroplastic group IIB intron splicing facilitator CRS2-B,
chloroplastic OS=Arabidopsis thaliana GN=CRS2B PE=2 SV=1
Length = 240
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 73/88 (82%)
Query: 75 PWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAK 134
PWLIVGLGNPG +Y+GTRHNVGFEM+D +A EG+ ++++ KA G G I +VP++LAK
Sbjct: 45 PWLIVGLGNPGNKYHGTRHNVGFEMIDVLARKEGVLMNTIQSKALIGIGAIEDVPILLAK 104
Query: 135 PQTFMNASGQSVGSIVSYYKIPLKQVLV 162
PQT+MN SG+SVGS+ S+Y++PL+ +L+
Sbjct: 105 PQTYMNFSGESVGSLASHYRVPLRHILM 132
>sp|Q9M5P4|CRS2_MAIZE Chloroplastic group IIB intron splicing facilitator CRS2,
chloroplastic OS=Zea mays GN=CRS2 PE=1 SV=1
Length = 256
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 74/101 (73%)
Query: 62 SLVSPKPKQQQQHPWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFG 121
S+ P + PWLI GLGNPG +Y GTRHNVGFEMVD IA EGI+++++ K+ G
Sbjct: 48 SVPDPAAGPVEYTPWLIAGLGNPGNKYYGTRHNVGFEMVDRIAAEEGITMNTIQSKSLLG 107
Query: 122 KGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLV 162
G IG VPV++ KPQ++MN SG+++G + +YY++PL+ +L+
Sbjct: 108 IGSIGEVPVLVVKPQSYMNYSGEAIGPLAAYYQVPLRHILL 148
>sp|Q9FKN4|CRS2A_ARATH Chloroplastic group IIB intron splicing facilitator CRS2-A,
chloroplastic OS=Arabidopsis thaliana GN=CRS2A PE=2 SV=1
Length = 246
Score = 117 bits (292), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 69/88 (78%)
Query: 75 PWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAK 134
PWLIVGLGNPG +Y GTRHN+GFEM+D IA A IS++++ KA G G +G VP++L K
Sbjct: 51 PWLIVGLGNPGLKYYGTRHNIGFEMIDHIARATDISMNTIQSKALVGIGSVGEVPILLVK 110
Query: 135 PQTFMNASGQSVGSIVSYYKIPLKQVLV 162
PQ +MN SG+SVG + +YY+IPL+ +L+
Sbjct: 111 PQGYMNFSGESVGPLAAYYQIPLRHILM 138
>sp|Q8R757|PTH_THETN Peptidyl-tRNA hydrolase OS=Thermoanaerobacter tengcongensis (strain
DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN=pth PE=3
SV=1
Length = 185
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 65/87 (74%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
++I GLGNPGK+Y GTRHNVGF ++DA+++ GI VS + FK+ G+G V+L KP
Sbjct: 2 YIIAGLGNPGKEYEGTRHNVGFMVIDALSKKLGIEVSRLKFKSLMGEGHFKGEKVILLKP 61
Query: 136 QTFMNASGQSVGSIVSYYKIPLKQVLV 162
QTFMN SG+++ V++YKIPL+ V+V
Sbjct: 62 QTFMNLSGEALYDAVNFYKIPLENVIV 88
>sp|A6TJM7|PTH_ALKMQ Peptidyl-tRNA hydrolase OS=Alkaliphilus metalliredigens (strain
QYMF) GN=pth PE=3 SV=1
Length = 185
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 67/87 (77%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
++IVGLGNPGK+Y+GTRHNVGF+++D +A GI+V+ + KA +G+ IG V+LAKP
Sbjct: 2 YIIVGLGNPGKKYSGTRHNVGFDVIDLLAHRLGITVNKLKHKALYGEARIGGEKVILAKP 61
Query: 136 QTFMNASGQSVGSIVSYYKIPLKQVLV 162
QTFMN SG+S+ ++ +YKI + ++V
Sbjct: 62 QTFMNLSGESIREMMQFYKIDPENLIV 88
>sp|A0PXL3|PTH_CLONN Peptidyl-tRNA hydrolase OS=Clostridium novyi (strain NT) GN=pth
PE=3 SV=1
Length = 188
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 61/87 (70%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
+LIVGLGNPGK+Y TRHNVGF+++D I+E I ++ FK +G G I N V+L KP
Sbjct: 2 FLIVGLGNPGKEYEHTRHNVGFDIIDVISEKYNIDLNKKKFKGMYGDGTIANEKVILLKP 61
Query: 136 QTFMNASGQSVGSIVSYYKIPLKQVLV 162
T+MN SG+S+ + +YKIP + V+V
Sbjct: 62 LTYMNLSGESIKEVTDFYKIPKENVIV 88
>sp|Q181A2|PTH_CLOD6 Peptidyl-tRNA hydrolase OS=Clostridium difficile (strain 630)
GN=pth PE=3 SV=1
Length = 186
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 63/87 (72%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
+++VGLGNPGK+Y TRHNVGF+++D +A+ ISV+ + KA G+G +G V+L KP
Sbjct: 2 YVVVGLGNPGKKYEKTRHNVGFDVIDILAKEYNISVTKIKHKALIGEGRVGTEKVLLVKP 61
Query: 136 QTFMNASGQSVGSIVSYYKIPLKQVLV 162
QT+MN SG+++ I YYK+ L ++V
Sbjct: 62 QTYMNLSGETLIDIYKYYKVDLSNIVV 88
>sp|A8MK43|PTH_ALKOO Peptidyl-tRNA hydrolase OS=Alkaliphilus oremlandii (strain OhILAs)
GN=pth PE=3 SV=1
Length = 185
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 61/86 (70%)
Query: 77 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQ 136
+IVGLGNPGK+Y+ TRHN+GFE +D +A+ I V + KA G+G IG V+L KPQ
Sbjct: 3 IIVGLGNPGKKYDATRHNIGFEAIDMLAKRNNIEVKKLKHKALCGEGTIGGNKVLLVKPQ 62
Query: 137 TFMNASGQSVGSIVSYYKIPLKQVLV 162
TFMN SGQS+ IV +YK+ K ++V
Sbjct: 63 TFMNLSGQSLLDIVQFYKVDPKNIVV 88
>sp|B0K466|PTH_THEPX Peptidyl-tRNA hydrolase OS=Thermoanaerobacter sp. (strain X514)
GN=pth PE=3 SV=1
Length = 184
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 66/87 (75%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
++I GLGNPG++Y GTRHNVGF ++D +A+ G++V+ + FK+ G+G ++L KP
Sbjct: 2 YVIAGLGNPGREYEGTRHNVGFMVIDELAKKLGMNVTKLKFKSLVGEGNFKGEKIILLKP 61
Query: 136 QTFMNASGQSVGSIVSYYKIPLKQVLV 162
QTFMN+SG+++ V++YKIPL+ V+V
Sbjct: 62 QTFMNSSGEALYDAVNFYKIPLENVIV 88
>sp|Q899I4|PTH_CLOTE Peptidyl-tRNA hydrolase OS=Clostridium tetani (strain Massachusetts
/ E88) GN=pth PE=3 SV=1
Length = 188
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 58/87 (66%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
+L+VGLGNPGK+Y TRHN+GFE VD I+ I + FK FG G I N V+L KP
Sbjct: 2 FLLVGLGNPGKEYEKTRHNIGFEAVDKISYEYNIPIKRERFKGVFGDGRISNEKVILLKP 61
Query: 136 QTFMNASGQSVGSIVSYYKIPLKQVLV 162
T+MN SG+S+ I+ YY IP+ V+V
Sbjct: 62 TTYMNLSGESLREIIEYYNIPITNVIV 88
>sp|A9IR82|PTH_BART1 Peptidyl-tRNA hydrolase OS=Bartonella tribocorum (strain CIP 105476
/ IBS 506) GN=pth PE=3 SV=1
Length = 193
Score = 96.7 bits (239), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 57/87 (65%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
WLI GLGNPG QY RHN+GF VDA+ ++ S S F+A GFI N V L KP
Sbjct: 2 WLIAGLGNPGSQYRNNRHNIGFMAVDAVYQSFSFSPWSKKFQAEISNGFINNEKVFLIKP 61
Query: 136 QTFMNASGQSVGSIVSYYKIPLKQVLV 162
QTFMN SGQ++G + +YK+ LK +++
Sbjct: 62 QTFMNLSGQAIGEALRFYKLDLKNLII 88
>sp|B2UXS9|PTH_CLOBA Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Alaska E43
/ Type E3) GN=pth PE=3 SV=1
Length = 191
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 61/87 (70%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
+LIVGLGNPG +Y+ TRHN+GFE++D I+ I ++ FK +G+GFI N V+L KP
Sbjct: 2 FLIVGLGNPGSKYDNTRHNIGFEVIDNISNEYNIDINRQKFKGVYGEGFIANNKVILLKP 61
Query: 136 QTFMNASGQSVGSIVSYYKIPLKQVLV 162
T+MN SG SV + ++YKI + ++V
Sbjct: 62 TTYMNLSGDSVREVANFYKISNENIIV 88
>sp|B0KBG1|PTH_THEP3 Peptidyl-tRNA hydrolase OS=Thermoanaerobacter pseudethanolicus
(strain ATCC 33223 / 39E) GN=pth PE=3 SV=1
Length = 184
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 66/87 (75%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
++I GLGNPG++Y GTRHNVGF ++D +A+ G++V+ + FK+ G+G ++L KP
Sbjct: 2 YVIAGLGNPGREYEGTRHNVGFMVIDELAKKLGMNVTKLKFKSLVGEGNFKGEKIILLKP 61
Query: 136 QTFMNASGQSVGSIVSYYKIPLKQVLV 162
QTF+N+SG+++ V++YKIPL+ V+V
Sbjct: 62 QTFVNSSGEALYDAVNFYKIPLENVIV 88
>sp|Q2LUK5|PTH_SYNAS Peptidyl-tRNA hydrolase OS=Syntrophus aciditrophicus (strain SB)
GN=pth PE=3 SV=1
Length = 196
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 60/86 (69%)
Query: 77 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQ 136
LIVGLGNPG +Y TRHN GF ++D +AE + I +S F A +GKG I V+LAKPQ
Sbjct: 3 LIVGLGNPGARYRFTRHNFGFFVLDQLAEDQDIMMSQTGFDALWGKGVIAGQSVLLAKPQ 62
Query: 137 TFMNASGQSVGSIVSYYKIPLKQVLV 162
TFMN SG+SV + ++KI ++ VLV
Sbjct: 63 TFMNLSGKSVRKLADFFKIVVEDVLV 88
>sp|A6LPJ5|PTH_CLOB8 Peptidyl-tRNA hydrolase OS=Clostridium beijerinckii (strain ATCC
51743 / NCIMB 8052) GN=pth PE=3 SV=1
Length = 191
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 60/87 (68%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
+LIVGLGNPG +Y TRHN+GF+++D IA+ I ++ FK +G+GFI VML KP
Sbjct: 2 FLIVGLGNPGNEYENTRHNIGFKVIDNIAKEYNIEINRQKFKGMYGEGFINGKKVMLLKP 61
Query: 136 QTFMNASGQSVGSIVSYYKIPLKQVLV 162
T+MN SG+SV +V +Y + ++LV
Sbjct: 62 TTYMNLSGESVREVVDFYNLNNDEILV 88
>sp|A9KR32|PTH_CLOPH Peptidyl-tRNA hydrolase OS=Clostridium phytofermentans (strain ATCC
700394 / DSM 18823 / ISDg) GN=pth PE=3 SV=1
Length = 191
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 62/87 (71%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
++I+GLGNP ++Y TRHN+GF+ + +A+ IS+ + KA GKG IG V+LAKP
Sbjct: 2 YIIIGLGNPTREYEATRHNIGFDAITRLADDNNISLDTKKHKAICGKGMIGGEKVILAKP 61
Query: 136 QTFMNASGQSVGSIVSYYKIPLKQVLV 162
QT+MN SG+SV ++ +YK+ ++++V
Sbjct: 62 QTYMNLSGESVRELIDFYKVTKEEIIV 88
>sp|B2TI10|PTH_CLOBB Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Eklund 17B
/ Type B) GN=pth PE=3 SV=1
Length = 191
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 61/87 (70%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
+LIVGLGNPG +Y+ TRHN+GFE++D I+ I ++ F+ +G+GFI N V+L KP
Sbjct: 2 FLIVGLGNPGSKYDNTRHNIGFEVIDNISNEYNIDINRQKFRGVYGEGFIANNKVILLKP 61
Query: 136 QTFMNASGQSVGSIVSYYKIPLKQVLV 162
T+MN SG SV + ++YKI + ++V
Sbjct: 62 TTYMNLSGDSVREVANFYKISNENIIV 88
>sp|A5I7R5|PTH_CLOBH Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Hall /
ATCC 3502 / NCTC 13319 / Type A) GN=pth PE=3 SV=1
Length = 189
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 66/101 (65%), Gaps = 6/101 (5%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
+L+VGLGN GK+Y TRHN+GF++VD IAE I ++ FK +G+G IGN ++L KP
Sbjct: 2 YLVVGLGNIGKEYKKTRHNIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLKP 61
Query: 136 QTFMNASGQSVGSIVSYYKIPLKQVLVRQNIFILFYRYSMT 176
T+MN SG+SV ++YKI ++NI +++ S+
Sbjct: 62 STYMNLSGESVIEAANFYKID------KENIIVIYDDMSID 96
>sp|A7FPJ7|PTH_CLOB1 Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain ATCC 19397
/ Type A) GN=pth PE=3 SV=1
Length = 189
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 66/101 (65%), Gaps = 6/101 (5%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
+L+VGLGN GK+Y TRHN+GF++VD IAE I ++ FK +G+G IGN ++L KP
Sbjct: 2 YLVVGLGNIGKEYKKTRHNIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLKP 61
Query: 136 QTFMNASGQSVGSIVSYYKIPLKQVLVRQNIFILFYRYSMT 176
T+MN SG+SV ++YKI ++NI +++ S+
Sbjct: 62 STYMNLSGESVIEAANFYKID------KENIIVIYDDMSID 96
>sp|A7GJD4|PTH_CLOBL Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Langeland
/ NCTC 10281 / Type F) GN=pth PE=3 SV=1
Length = 189
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 66/101 (65%), Gaps = 6/101 (5%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
+L+VGLGN GK+Y TRHN+GF++VD IAE I ++ FK +G+G IGN ++L KP
Sbjct: 2 YLVVGLGNIGKEYKKTRHNIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLKP 61
Query: 136 QTFMNASGQSVGSIVSYYKIPLKQVLVRQNIFILFYRYSMT 176
T+MN SG+SV ++YKI ++NI +++ S+
Sbjct: 62 STYMNLSGESVIEAANFYKID------KENIIVIYDDMSID 96
>sp|B1IGZ7|PTH_CLOBK Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Okra /
Type B1) GN=pth PE=3 SV=1
Length = 189
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 66/101 (65%), Gaps = 6/101 (5%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
+L+VGLGN GK+Y TRHN+GF++VD IAE I ++ FK +G+G IGN ++L KP
Sbjct: 2 YLVVGLGNIGKEYKKTRHNIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLKP 61
Query: 136 QTFMNASGQSVGSIVSYYKIPLKQVLVRQNIFILFYRYSMT 176
T+MN SG+SV ++YKI ++NI +++ S+
Sbjct: 62 STYMNLSGESVIEAANFYKID------KENIIVIYDDMSID 96
>sp|C1FNE6|PTH_CLOBJ Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Kyoto /
Type A2) GN=pth PE=3 SV=1
Length = 189
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 66/101 (65%), Gaps = 6/101 (5%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
+L+VGLGN GK+Y TRHN+GF++VD IAE I ++ FK +G+G IGN ++L KP
Sbjct: 2 YLVVGLGNIGKEYKKTRHNIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLKP 61
Query: 136 QTFMNASGQSVGSIVSYYKIPLKQVLVRQNIFILFYRYSMT 176
T+MN SG+SV ++YKI ++NI +++ S+
Sbjct: 62 STYMNLSGESVIEAANFYKID------KENIIVIYDDMSID 96
>sp|B1YGP7|PTH_EXIS2 Peptidyl-tRNA hydrolase OS=Exiguobacterium sibiricum (strain DSM
17290 / JCM 13490 / 255-15) GN=pth PE=3 SV=1
Length = 185
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 59/85 (69%)
Query: 78 IVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQT 137
IVGLGNPG +Y TRHN+GF +DA+A+ GI ++ FKA FG G I V+L KP T
Sbjct: 4 IVGLGNPGAKYTNTRHNIGFLAIDALAKEHGIKLTESKFKAVFGTGMIKGERVVLVKPLT 63
Query: 138 FMNASGQSVGSIVSYYKIPLKQVLV 162
+MN SG++V ++ +YKI ++ VLV
Sbjct: 64 YMNLSGEAVRPLLDFYKIAVEDVLV 88
>sp|C3KW96|PTH_CLOB6 Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain 657 / Type
Ba4) GN=pth PE=3 SV=1
Length = 189
Score = 93.6 bits (231), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 66/101 (65%), Gaps = 6/101 (5%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
+L+VGLGN GK+Y TRHN+GF++VD IAE I ++ FK +G+G IGN ++L KP
Sbjct: 2 YLVVGLGNIGKEYKQTRHNIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLKP 61
Query: 136 QTFMNASGQSVGSIVSYYKIPLKQVLVRQNIFILFYRYSMT 176
T+MN SG+SV ++YKI ++NI +++ S+
Sbjct: 62 STYMNLSGESVIEAANFYKID------KENIIVIYDDMSID 96
>sp|Q9F8Q3|PTH_CARHZ Peptidyl-tRNA hydrolase OS=Carboxydothermus hydrogenoformans
(strain Z-2901 / DSM 6008) GN=pth PE=3 SV=2
Length = 187
Score = 93.6 bits (231), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 62/87 (71%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
++I GLGNPG++Y TRHN GF +VD +A+ GI ++ FK+ G+G I V V+L KP
Sbjct: 2 FIIAGLGNPGQEYENTRHNAGFMVVDELAKKHGILITKRKFKSLVGEGEILGVKVLLLKP 61
Query: 136 QTFMNASGQSVGSIVSYYKIPLKQVLV 162
QT+MN SG +V VS+YK+PL +++V
Sbjct: 62 QTYMNLSGTAVQEAVSFYKLPLSRLVV 88
>sp|B1KTE2|PTH_CLOBM Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Loch Maree
/ Type A3) GN=pth PE=3 SV=1
Length = 189
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 66/101 (65%), Gaps = 6/101 (5%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
+L+VGLGN GK+Y TRHN+GF++VD +AE I ++ FK +G+G IGN ++L KP
Sbjct: 2 YLVVGLGNIGKEYKKTRHNIGFDVVDIVAEKYNIEINRQKFKGSYGEGRIGNEKIILLKP 61
Query: 136 QTFMNASGQSVGSIVSYYKIPLKQVLVRQNIFILFYRYSMT 176
T+MN SG+SV ++YKI ++NI +++ S+
Sbjct: 62 STYMNLSGESVIEAANFYKID------KENIIVIYDDMSID 96
>sp|Q0SQ66|PTH_CLOPS Peptidyl-tRNA hydrolase OS=Clostridium perfringens (strain SM101 /
Type A) GN=pth PE=3 SV=1
Length = 188
Score = 93.2 bits (230), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%)
Query: 77 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQ 136
LIVGLGNPGKQY TRHN+GF+++D +A I V+ FK G+GFI N V+L KP
Sbjct: 3 LIVGLGNPGKQYEKTRHNIGFDVIDYMANKYNIDVNREKFKGICGEGFIENKKVILLKPL 62
Query: 137 TFMNASGQSVGSIVSYYKIPLKQVLV 162
T+MN SG+S+ V++YK+ +++V
Sbjct: 63 TYMNLSGESIREFVNFYKLEDDEIIV 88
>sp|A7GJW3|PTH_BACCN Peptidyl-tRNA hydrolase OS=Bacillus cereus subsp. cytotoxis (strain
NVH 391-98) GN=pth PE=3 SV=1
Length = 186
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 59/86 (68%)
Query: 77 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQ 136
LIVGLGNPG++Y TRHN+GF +D +A+ IS++ FK FG GF+ V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGMFGAGFVNGEKVILLKPL 62
Query: 137 TFMNASGQSVGSIVSYYKIPLKQVLV 162
T+MN SG+S+ ++ YYKI L+ ++
Sbjct: 63 TYMNLSGESIRPLMDYYKIDLEDFII 88
>sp|Q8XHJ8|PTH_CLOPE Peptidyl-tRNA hydrolase OS=Clostridium perfringens (strain 13 /
Type A) GN=pth PE=3 SV=1
Length = 188
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 60/86 (69%)
Query: 77 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQ 136
LIVGLGNPGKQY TRHN+GF+++D +A I V+ FK G+GFI N V+L KP
Sbjct: 3 LIVGLGNPGKQYEQTRHNIGFDVIDYMANKYNIDVNREKFKGICGEGFIENKKVILLKPL 62
Query: 137 TFMNASGQSVGSIVSYYKIPLKQVLV 162
T+MN SG+S+ + ++YK+ +++V
Sbjct: 63 TYMNLSGESIRELANFYKLEDDEIIV 88
>sp|Q0TMG7|PTH_CLOP1 Peptidyl-tRNA hydrolase OS=Clostridium perfringens (strain ATCC
13124 / NCTC 8237 / Type A) GN=pth PE=3 SV=1
Length = 188
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 60/86 (69%)
Query: 77 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQ 136
LIVGLGNPGKQY TRHN+GF+++D +A I V+ FK G+GFI N V+L KP
Sbjct: 3 LIVGLGNPGKQYEQTRHNIGFDVIDYMANKYNIDVNREKFKGICGEGFIENKKVILLKPL 62
Query: 137 TFMNASGQSVGSIVSYYKIPLKQVLV 162
T+MN SG+S+ + ++YK+ +++V
Sbjct: 63 TYMNLSGESIRELANFYKLEDDEIIV 88
>sp|C4ZBV8|PTH_EUBR3 Peptidyl-tRNA hydrolase OS=Eubacterium rectale (strain ATCC 33656 /
VPI 0990) GN=pth PE=3 SV=1
Length = 186
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 65/88 (73%), Gaps = 1/88 (1%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
++IVGLGNP K+Y TRHN+GF+++DA+A+ ISV+ KA G G I + V+L KP
Sbjct: 2 YVIVGLGNPDKKYEHTRHNIGFDVIDALADKYNISVTDKKHKALCGSGVIEGMKVLLVKP 61
Query: 136 QTFMNASGQSVGSIVSYYKI-PLKQVLV 162
QT+MN SG+SV ++++YK+ P ++++V
Sbjct: 62 QTYMNLSGESVAEVMNFYKLDPDEEMIV 89
>sp|C4KZU9|PTH_EXISA Peptidyl-tRNA hydrolase OS=Exiguobacterium sp. (strain ATCC
BAA-1283 / AT1b) GN=pth PE=3 SV=1
Length = 185
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 57/85 (67%)
Query: 78 IVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQT 137
IVGLGNPGK++ TRHNVGF +D +AE GIS++ F A G G I V+L KP T
Sbjct: 4 IVGLGNPGKKFEMTRHNVGFLAIDRLAEKHGISLNEAKFNALMGTGRINGERVVLVKPLT 63
Query: 138 FMNASGQSVGSIVSYYKIPLKQVLV 162
+MN SG++V I+ YYKI + +LV
Sbjct: 64 YMNLSGEAVRPILDYYKIEIDDLLV 88
>sp|Q03SZ9|PTH_LACBA Peptidyl-tRNA hydrolase OS=Lactobacillus brevis (strain ATCC 367 /
JCM 1170) GN=pth PE=3 SV=1
Length = 185
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 61/93 (65%)
Query: 77 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQ 136
+IVGLGN G QY+ TRHN GF +VDA A+ GI++++ A FG G + V++ KP
Sbjct: 3 MIVGLGNIGPQYDNTRHNTGFMVVDAFAQQHGIALTTRKMDARFGSGLVNGEKVLVVKPT 62
Query: 137 TFMNASGQSVGSIVSYYKIPLKQVLVRQNIFIL 169
TFMN SG++V I+ Y+KI + V+V Q+ L
Sbjct: 63 TFMNESGRAVHPIMDYFKIDVADVMVVQDDMDL 95
>sp|Q6G0F9|PTH_BARQU Peptidyl-tRNA hydrolase OS=Bartonella quintana (strain Toulouse)
GN=pth PE=3 SV=1
Length = 193
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 55/87 (63%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
WLI GLGNPG QY RHN+GF ++DAI ++ S S F+A G I L KP
Sbjct: 2 WLIAGLGNPGLQYQNNRHNIGFMVIDAIYQSFSFSPWSKKFQAEISNGLIDGEKTFLIKP 61
Query: 136 QTFMNASGQSVGSIVSYYKIPLKQVLV 162
QTFMN SGQ++G ++ +YK+ LK +V
Sbjct: 62 QTFMNLSGQAIGEVLRFYKLDLKNFIV 88
>sp|C4Z4L5|PTH_EUBE2 Peptidyl-tRNA hydrolase OS=Eubacterium eligens (strain ATCC 27750 /
VPI C15-48) GN=pth PE=3 SV=1
Length = 186
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 55/87 (63%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
++I GLGNPGK+Y GTRHN GF ++D +A+ ISV + K GKG I V+L KP
Sbjct: 2 YIIAGLGNPGKEYMGTRHNAGFSVIDELADKYNISVDTAKHKGLIGKGVIAGQKVILVKP 61
Query: 136 QTFMNASGQSVGSIVSYYKIPLKQVLV 162
T+MN SG+ + ++ YYK + LV
Sbjct: 62 MTYMNNSGECIREVMDYYKCDIDDFLV 88
>sp|Q9KGJ3|PTH_BACHD Peptidyl-tRNA hydrolase OS=Bacillus halodurans (strain ATCC BAA-125
/ DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=pth PE=3
SV=1
Length = 185
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 57/86 (66%)
Query: 77 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQ 136
LIVGLGNPG +Y+GTRHNVGF++VDA+A I + +G+G I + L KPQ
Sbjct: 3 LIVGLGNPGAKYDGTRHNVGFDVVDAVARRLNIEIKQSKANGLYGEGRIDGEKIFLLKPQ 62
Query: 137 TFMNASGQSVGSIVSYYKIPLKQVLV 162
TFMN SG+SV + YY + ++ +LV
Sbjct: 63 TFMNRSGESVRPFLEYYNMEVEDLLV 88
>sp|Q6HPW6|PTH_BACHK Peptidyl-tRNA hydrolase OS=Bacillus thuringiensis subsp. konkukian
(strain 97-27) GN=pth PE=3 SV=1
Length = 186
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 59/86 (68%)
Query: 77 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQ 136
LIVGLGNPG++Y TRHN+GF +D +A+ IS++ FK FG GF+ V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLKPL 62
Query: 137 TFMNASGQSVGSIVSYYKIPLKQVLV 162
T+MN SG+S+ ++ YYKI ++ +V
Sbjct: 63 TYMNLSGESIRPLMDYYKIDVEDFVV 88
>sp|Q81VY9|PTH_BACAN Peptidyl-tRNA hydrolase OS=Bacillus anthracis GN=pth PE=3 SV=1
Length = 186
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 59/86 (68%)
Query: 77 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQ 136
LIVGLGNPG++Y TRHN+GF +D +A+ IS++ FK FG GF+ V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLKPL 62
Query: 137 TFMNASGQSVGSIVSYYKIPLKQVLV 162
T+MN SG+S+ ++ YYKI ++ +V
Sbjct: 63 TYMNLSGESIRPLMDYYKIDVEDFVV 88
>sp|B8G3X3|PTH_CHLAD Peptidyl-tRNA hydrolase OS=Chloroflexus aggregans (strain MD-66 /
DSM 9485) GN=pth PE=3 SV=1
Length = 188
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
WLIVGLGNPG++Y TRHN+GF V+ +AE G++ + K+ +G I V L KP
Sbjct: 2 WLIVGLGNPGERYARTRHNIGFRSVETLAERHGLTFRNQRAKSEIAEGIIRGQRVALVKP 61
Query: 136 QTFMNASGQSVGSIVSYYKI-PLKQVLV 162
QT+MN SGQ+V ++ +YKI P +++LV
Sbjct: 62 QTYMNLSGQAVAALRQWYKIDPARELLV 89
>sp|Q81J96|PTH_BACCR Peptidyl-tRNA hydrolase OS=Bacillus cereus (strain ATCC 14579 / DSM
31) GN=pth PE=3 SV=2
Length = 186
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 59/86 (68%)
Query: 77 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQ 136
LIVGLGNPG++Y TRHN+GF +D +A+ IS++ FK FG GF+ V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPL 62
Query: 137 TFMNASGQSVGSIVSYYKIPLKQVLV 162
T+MN SG+S+ ++ YYKI ++ +V
Sbjct: 63 TYMNLSGESIRPLMDYYKIDVEDFVV 88
>sp|Q6MJR3|PTH_BDEBA Peptidyl-tRNA hydrolase OS=Bdellovibrio bacteriovorus (strain ATCC
15356 / DSM 50701 / NCIB 9529 / HD100) GN=pth PE=3 SV=1
Length = 187
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 58/87 (66%)
Query: 76 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKP 135
WLIVGLGNPG +Y TRHN+GF VD + E G FKA + I + PV+ KP
Sbjct: 2 WLIVGLGNPGGEYKLTRHNIGFMAVDFLMEGLGNPPIKNQFKAEIAQAKIKDHPVIFCKP 61
Query: 136 QTFMNASGQSVGSIVSYYKIPLKQVLV 162
QT+MN SG+SV ++ +YKIPL++++V
Sbjct: 62 QTYMNLSGESVQPLMGFYKIPLERLIV 88
>sp|Q63HI2|PTH_BACCZ Peptidyl-tRNA hydrolase OS=Bacillus cereus (strain ZK / E33L)
GN=pth PE=3 SV=1
Length = 186
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 59/86 (68%)
Query: 77 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQ 136
LIVGLGNPG++Y TRHN+GF +D +A+ IS++ FK FG GF+ V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPL 62
Query: 137 TFMNASGQSVGSIVSYYKIPLKQVLV 162
T+MN SG+S+ ++ YYKI ++ +V
Sbjct: 63 TYMNLSGESIRPLMDYYKIDVEDFVV 88
>sp|B9IZD4|PTH_BACCQ Peptidyl-tRNA hydrolase OS=Bacillus cereus (strain Q1) GN=pth PE=3
SV=1
Length = 186
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 59/86 (68%)
Query: 77 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQ 136
LIVGLGNPG++Y TRHN+GF +D +A+ IS++ FK FG GF+ V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPL 62
Query: 137 TFMNASGQSVGSIVSYYKIPLKQVLV 162
T+MN SG+S+ ++ YYKI ++ +V
Sbjct: 63 TYMNLSGESIRPLMDYYKIDVEDFVV 88
>sp|C3MFM4|PTH_RHISN Peptidyl-tRNA hydrolase OS=Rhizobium sp. (strain NGR234) GN=pth
PE=3 SV=1
Length = 239
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 57/86 (66%)
Query: 77 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQ 136
+I GLGNPG +Y G RHN+GF VDAI + +G S S FKA +G I V+L KPQ
Sbjct: 3 IIAGLGNPGSKYAGNRHNIGFMAVDAIWQRQGFSSWSKKFKAEIAEGEIAGERVLLIKPQ 62
Query: 137 TFMNASGQSVGSIVSYYKIPLKQVLV 162
TFMN SG++VG + +YK+ K ++V
Sbjct: 63 TFMNLSGEAVGEAMRFYKLAPKDIVV 88
>sp|Q73FF7|PTH_BACC1 Peptidyl-tRNA hydrolase OS=Bacillus cereus (strain ATCC 10987)
GN=pth PE=3 SV=2
Length = 186
Score = 90.1 bits (222), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 59/86 (68%)
Query: 77 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQ 136
LIVGLGNPG++Y TRHN+GF +D +A+ IS++ FK FG GF+ V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPL 62
Query: 137 TFMNASGQSVGSIVSYYKIPLKQVLV 162
T+MN SG+S+ ++ YYKI ++ +V
Sbjct: 63 TYMNLSGESIRPLMDYYKIDVEDFVV 88
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.133 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,932,901
Number of Sequences: 539616
Number of extensions: 2440766
Number of successful extensions: 7346
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 724
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 6117
Number of HSP's gapped (non-prelim): 742
length of query: 176
length of database: 191,569,459
effective HSP length: 110
effective length of query: 66
effective length of database: 132,211,699
effective search space: 8725972134
effective search space used: 8725972134
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)