Query 030503
Match_columns 176
No_of_seqs 167 out of 1036
Neff 4.7
Searched_HMMs 29240
Date Tue Mar 26 00:00:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030503.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030503hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2pth_A Peptidyl-tRNA hydrolase 100.0 4.7E-44 1.6E-48 295.1 12.4 100 75-174 2-102 (193)
2 1ryb_A CRS2; alpha-beta, hydro 100.0 5.7E-44 2E-48 297.2 12.6 103 72-174 14-116 (205)
3 2z2i_A PTH, peptidyl-tRNA hydr 100.0 8.6E-44 2.9E-48 293.3 11.5 101 74-174 3-104 (191)
4 3nea_A PTH, peptidyl-tRNA hydr 100.0 1.3E-43 4.4E-48 295.5 12.2 101 74-174 22-123 (207)
5 3v2i_A PTH, peptidyl-tRNA hydr 100.0 6.4E-43 2.2E-47 293.9 12.4 102 73-174 21-123 (222)
6 4fyj_A PTH, peptidyl-tRNA hydr 100.0 7.4E-43 2.5E-47 289.4 12.3 100 75-174 10-110 (199)
7 4hoy_A PTH, peptidyl-tRNA hydr 100.0 1.9E-42 6.5E-47 285.6 12.8 100 75-174 4-104 (193)
8 4fno_A PTH, peptidyl-tRNA hydr 100.0 5.3E-44 1.8E-48 295.2 0.0 100 75-174 4-104 (194)
9 1cfz_A Hydrogenase 2 maturatio 74.5 3 0.0001 32.2 3.9 30 75-108 2-31 (162)
10 3pu6_A Uncharacterized protein 63.0 7.6 0.00026 29.8 4.0 29 75-107 4-32 (157)
11 2e85_A Hydrogenase 3 maturatio 62.2 6.1 0.00021 30.4 3.3 29 75-107 5-33 (159)
12 3utn_X Thiosulfate sulfurtrans 51.4 14 0.00047 31.7 4.1 35 135-169 90-124 (327)
13 3ddh_A Putative haloacid dehal 46.4 9.8 0.00034 27.7 2.1 30 142-171 159-190 (234)
14 3fzq_A Putative hydrolase; YP_ 37.5 21 0.00073 27.4 2.8 26 142-167 201-226 (274)
15 3r4c_A Hydrolase, haloacid deh 36.9 22 0.00076 27.4 2.9 25 143-167 196-220 (268)
16 2x4d_A HLHPP, phospholysine ph 35.4 14 0.00049 27.9 1.5 30 142-171 192-223 (271)
17 3dnp_A Stress response protein 35.2 24 0.00083 27.5 2.9 26 142-167 203-228 (290)
18 4dw8_A Haloacid dehalogenase-l 34.6 24 0.00081 27.5 2.7 25 143-167 199-223 (279)
19 3mpo_A Predicted hydrolase of 33.6 23 0.00078 27.5 2.5 26 142-167 198-223 (279)
20 3vay_A HAD-superfamily hydrola 33.6 16 0.00055 26.9 1.5 30 142-171 157-188 (230)
21 3dao_A Putative phosphatse; st 33.5 27 0.00091 27.6 2.9 26 142-167 212-237 (283)
22 3l7y_A Putative uncharacterize 32.9 28 0.00094 27.9 2.9 26 142-167 229-254 (304)
23 2pq0_A Hypothetical conserved 32.4 23 0.00078 27.3 2.3 25 143-167 185-209 (258)
24 3pgv_A Haloacid dehalogenase-l 32.4 29 0.00098 27.4 2.9 26 142-167 210-235 (285)
25 3b64_A Macrophage migration in 30.1 42 0.0014 23.4 3.1 24 149-173 84-107 (112)
26 1c8b_A Spore protease; novel f 29.6 22 0.00077 31.6 1.9 75 74-167 113-196 (371)
27 3qnm_A Haloacid dehalogenase-l 28.1 44 0.0015 24.3 3.1 26 142-167 164-189 (240)
28 1l7m_A Phosphoserine phosphata 27.9 40 0.0014 24.1 2.8 25 143-167 145-169 (211)
29 2c4n_A Protein NAGD; nucleotid 26.9 40 0.0014 24.7 2.7 26 142-167 178-203 (250)
30 3ed5_A YFNB; APC60080, bacillu 26.9 23 0.0008 26.0 1.3 29 142-170 160-191 (238)
31 3fwt_A Macrophage migration in 26.6 39 0.0013 24.9 2.6 25 148-173 104-128 (133)
32 3u26_A PF00702 domain protein; 25.1 28 0.00095 25.5 1.5 31 142-172 157-189 (234)
33 2om6_A Probable phosphoserine 24.1 32 0.0011 25.0 1.7 30 142-171 160-191 (235)
34 3pdw_A Uncharacterized hydrola 24.1 22 0.00075 27.5 0.8 26 142-167 185-210 (266)
35 2rbk_A Putative uncharacterize 23.8 47 0.0016 25.7 2.7 26 142-167 188-213 (261)
36 3mc1_A Predicted phosphatase, 23.7 46 0.0016 24.2 2.5 26 142-167 144-169 (226)
37 2ho4_A Haloacid dehalogenase-l 23.6 25 0.00086 26.6 1.0 30 142-171 181-212 (259)
38 1te2_A Putative phosphatase; s 23.3 51 0.0018 23.6 2.6 25 143-167 153-177 (226)
39 3c85_A Putative glutathione-re 23.2 90 0.0031 22.9 4.0 22 74-106 40-61 (183)
40 3s6j_A Hydrolase, haloacid deh 23.0 57 0.002 23.7 2.9 26 142-167 149-174 (233)
41 2pib_A Phosphorylated carbohyd 23.0 56 0.0019 23.2 2.8 26 142-167 142-167 (216)
42 1rlm_A Phosphatase; HAD family 23.0 50 0.0017 25.8 2.7 26 142-167 192-217 (271)
43 2pke_A Haloacid delahogenase-l 22.9 40 0.0014 25.4 2.1 30 142-171 164-195 (251)
44 3umg_A Haloacid dehalogenase; 22.8 60 0.0021 23.8 3.0 24 143-166 172-195 (254)
45 3e58_A Putative beta-phosphogl 22.6 55 0.0019 23.2 2.7 25 142-166 147-171 (214)
46 3umc_A Haloacid dehalogenase; 22.4 55 0.0019 24.3 2.7 25 142-166 175-199 (254)
47 2fdr_A Conserved hypothetical 21.9 55 0.0019 23.8 2.6 26 142-167 145-170 (229)
48 1nrw_A Hypothetical protein, h 21.8 56 0.0019 25.8 2.8 26 142-167 217-242 (288)
49 1rkq_A Hypothetical protein YI 21.7 54 0.0019 25.9 2.7 26 142-167 199-224 (282)
50 4ex6_A ALNB; modified rossman 21.5 56 0.0019 24.0 2.6 26 142-167 162-187 (237)
51 1s2o_A SPP, sucrose-phosphatas 21.2 62 0.0021 25.1 2.9 26 142-167 163-188 (244)
52 3m9l_A Hydrolase, haloacid deh 21.0 64 0.0022 23.4 2.8 26 142-167 129-154 (205)
53 2b30_A Pvivax hypothetical pro 20.9 61 0.0021 26.2 2.9 26 142-167 225-250 (301)
54 4dh4_A MIF; trimer, isomerase; 20.8 61 0.0021 22.7 2.5 19 150-168 85-103 (114)
55 2hdo_A Phosphoglycolate phosph 20.8 67 0.0023 23.2 2.9 25 142-166 140-164 (209)
56 3gyg_A NTD biosynthesis operon 20.7 59 0.002 25.5 2.7 26 142-167 212-237 (289)
57 3qxg_A Inorganic pyrophosphata 20.6 66 0.0023 23.9 2.9 26 142-167 168-193 (243)
58 3m20_A 4-oxalocrotonate tautom 20.4 95 0.0033 19.3 3.2 21 148-168 25-45 (62)
59 3um9_A Haloacid dehalogenase, 20.4 65 0.0022 23.4 2.7 26 142-167 154-179 (230)
60 3dv9_A Beta-phosphoglucomutase 20.2 64 0.0022 23.7 2.7 26 142-167 167-192 (247)
61 2wf7_A Beta-PGM, beta-phosphog 20.1 69 0.0024 23.0 2.8 24 143-166 148-171 (221)
No 1
>2pth_A Peptidyl-tRNA hydrolase; 1.20A {Escherichia coli} SCOP: c.56.3.1 PDB: 3ofv_A
Probab=100.00 E-value=4.7e-44 Score=295.12 Aligned_cols=100 Identities=35% Similarity=0.499 Sum_probs=95.6
Q ss_pred ceEEEEccCcccccCcCcchHHHHHHHHHHHHhCCCCc-ccceeeEEEEEEECCeeEEEEecCcccccchHHHHHHHHHc
Q 030503 75 PWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVS-SVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYY 153 (176)
Q Consensus 75 ~~LIVGLGNPG~kY~~TRHNVGf~vLD~La~~~~~~~~-~~k~~g~~a~~~i~~~~ViLlKP~TYMNlSG~aV~~l~~~y 153 (176)
++|||||||||++|++|||||||+++|+||++++.+++ +.++++.++++.+++++|+|+||+||||+||++|+++++||
T Consensus 2 m~LIvGLGNPG~~Y~~TRHNiGf~viD~La~~~~~~~~~~~k~~~~~~~~~~~g~~v~L~KP~TyMNlSG~sV~~~~~~y 81 (193)
T 2pth_A 2 IKLIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLVPTTFMNLSGKAVAAMASFF 81 (193)
T ss_dssp CCEEEECCCCSTTTTTSGGGHHHHHHHHHHHHHTCCCEEEGGGTEEEEEEEETTEEEEEEEECSCGGGTHHHHHHHHHHH
T ss_pred cEEEEEECCCCcccccCchHHHHHHHHHHHHHcCCCccccccccEEEEEEEECCeEEEEEcCCchHhcCcHHHHHHHHHh
Confidence 57999999999999999999999999999999999887 55789999999999999999999999999999999999999
Q ss_pred CCCCCcEEEEEecCCCCcccC
Q 030503 154 KIPLKQVLVRQNIFILFYRYS 174 (176)
Q Consensus 154 ki~pe~ILVIHDDLDLplGk~ 174 (176)
+|++++|||||||||||+|+.
T Consensus 82 ki~~~~ilVihDdldlp~G~i 102 (193)
T 2pth_A 82 RINPDEILVAHDELDLPPGVA 102 (193)
T ss_dssp TCCGGGEEEEEEETTSCTTCE
T ss_pred CCCHHHEEEEecccCCCCceE
Confidence 999999999999999999974
No 2
>1ryb_A CRS2; alpha-beta, hydrolase; 1.70A {Zea mays} SCOP: c.56.3.1 PDB: 1rym_A 1ryn_A
Probab=100.00 E-value=5.7e-44 Score=297.22 Aligned_cols=103 Identities=49% Similarity=0.909 Sum_probs=98.1
Q ss_pred CCCceEEEEccCcccccCcCcchHHHHHHHHHHHHhCCCCcccceeeEEEEEEECCeeEEEEecCcccccchHHHHHHHH
Q 030503 72 QQHPWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVS 151 (176)
Q Consensus 72 ~~~~~LIVGLGNPG~kY~~TRHNVGf~vLD~La~~~~~~~~~~k~~g~~a~~~i~~~~ViLlKP~TYMNlSG~aV~~l~~ 151 (176)
++.++|||||||||++|++|||||||+++|+||++++.++++.++++.++++.+++++|+|+||+||||+||++|+++++
T Consensus 14 ~~~~~LIVGLGNPG~~Y~~TRHNiGf~viD~La~~~~~~~~~~k~~~~~~~~~~~g~~v~LlKP~TyMNlSG~sV~~~~~ 93 (205)
T 1ryb_A 14 EYTPWLIAGLGNPGNKYYGTRHNVGFEMVDRIAAEEGITMNTIQSKSLLGIGSIGEVPVLVVKPQSYMNYSGEAIGPLAA 93 (205)
T ss_dssp -CCCEEEEECCCCSGGGTTBGGGHHHHHHHHHHHHTTCCCCEEETTEEEEEEEETTEEEEEEEECSCGGGHHHHHHHHHH
T ss_pred CCCCEEEEEECCCChhhccCchHHHHHHHHHHHHHcCCCcccccccEEEEEEEECCEEEEEEcCCchhhccCHHHHHHHH
Confidence 35789999999999999999999999999999999999988778899999999999999999999999999999999999
Q ss_pred HcCCCCCcEEEEEecCCCCcccC
Q 030503 152 YYKIPLKQVLVRQNIFILFYRYS 174 (176)
Q Consensus 152 ~yki~pe~ILVIHDDLDLplGk~ 174 (176)
||+|++++|||||||||||+|+.
T Consensus 94 ~yki~~~~ilVihDdLdLp~G~i 116 (205)
T 1ryb_A 94 YYQVPLRHILLIYDDTSLPNGVL 116 (205)
T ss_dssp HTTCCGGGEEEEEEETTSCTTCE
T ss_pred HhCCCHHHEEEEeecccCCCCeE
Confidence 99999999999999999999974
No 3
>2z2i_A PTH, peptidyl-tRNA hydrolase; protein synthesis; 1.98A {Mycobacterium tuberculosis} PDB: 2z2j_A 2z2k_A 3tck_A 3tcn_A 3td2_A 3td6_A 2jrc_A 3p2j_A 3kk0_A 3kjz_A
Probab=100.00 E-value=8.6e-44 Score=293.27 Aligned_cols=101 Identities=33% Similarity=0.600 Sum_probs=95.9
Q ss_pred CceEEEEccCcccccCcCcchHHHHHHHHHHHHhCCCCcc-cceeeEEEEEEECCeeEEEEecCcccccchHHHHHHHHH
Q 030503 74 HPWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSS-VNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSY 152 (176)
Q Consensus 74 ~~~LIVGLGNPG~kY~~TRHNVGf~vLD~La~~~~~~~~~-~k~~g~~a~~~i~~~~ViLlKP~TYMNlSG~aV~~l~~~ 152 (176)
.++|||||||||++|++|||||||+++|+||++++.++.+ .++++.++++.+++++|+|+||+||||+||++|+++++|
T Consensus 3 ~m~LIvGLGNPG~~Y~~TRHNiGf~viD~La~~~~~~~~~~~k~~~~~~~~~~~g~~v~L~KP~TyMNlSG~aV~~~~~~ 82 (191)
T 2z2i_A 3 EPLLVVGLGNPGANYARTRHNLGFVVADLLAARLGAKFKAHKRSGAEVATGRSAGRSLVLAKPRCYMNESGRQIGPLAKF 82 (191)
T ss_dssp SCEEEEECCCCSHHHHTBGGGHHHHHHHHHHHHTTCCCEECTTTSSEEEEEEETTEEEEEEECSSCGGGTHHHHHHHHHH
T ss_pred ccEEEEEECCCCchhccCchHHHHHHHHHHHHHcCCCccccccccEEEEEEEECCeEEEEEcCCchhhcccHHHHHHHHH
Confidence 4689999999999999999999999999999999998865 468899999999999999999999999999999999999
Q ss_pred cCCCCCcEEEEEecCCCCcccC
Q 030503 153 YKIPLKQVLVRQNIFILFYRYS 174 (176)
Q Consensus 153 yki~pe~ILVIHDDLDLplGk~ 174 (176)
|+|++++|||||||||||+|+.
T Consensus 83 yki~~~~ilVihDdldlp~G~i 104 (191)
T 2z2i_A 83 YSVAPANIIVIHDDLDLEFGRI 104 (191)
T ss_dssp TTCCGGGEEEEEEETTSCTTCE
T ss_pred hCCCHHHEEEEecccCCCCceE
Confidence 9999999999999999999974
No 4
>3nea_A PTH, peptidyl-tRNA hydrolase; 2.25A {Francisella tularensis subsp}
Probab=100.00 E-value=1.3e-43 Score=295.50 Aligned_cols=101 Identities=35% Similarity=0.479 Sum_probs=96.5
Q ss_pred CceEEEEccCcccccCcCcchHHHHHHHHHHHHhCCCCccc-ceeeEEEEEEECCeeEEEEecCcccccchHHHHHHHHH
Q 030503 74 HPWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSV-NFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSY 152 (176)
Q Consensus 74 ~~~LIVGLGNPG~kY~~TRHNVGf~vLD~La~~~~~~~~~~-k~~g~~a~~~i~~~~ViLlKP~TYMNlSG~aV~~l~~~ 152 (176)
.++|||||||||++|++|||||||+++|+||++++.++++. +|++.++++.+++++|+|+||+||||+||++|+++++|
T Consensus 22 ~~~LIVGLGNPG~~Y~~TRHNvGf~vvD~La~~~~~~~~~~~k~~~~~~~~~~~g~~v~LlKP~TyMNlSG~aV~~~~~~ 101 (207)
T 3nea_A 22 KIKMIIGLGNIGKEYQDTRHNVGEWFIAKIAQDNNQSFSSNPKLNCNLAKVSIDYNNVVLVFPTTYMNNSGLAVSKVANF 101 (207)
T ss_dssp CCCEEEECCCCSTTTTTSGGGHHHHHHHHHHHHTTCCCEEEGGGTEEEEEEEETTEEEEEEEESSCGGGHHHHHHHHHHH
T ss_pred CcEEEEEeCCCchhhCcCchHHHHHHHHHHHHHcCCCccccccccEEEEEEEECCeEEEEEeCCcchhCCcHHHHHHHHH
Confidence 47899999999999999999999999999999999998765 68899999999999999999999999999999999999
Q ss_pred cCCCCCcEEEEEecCCCCcccC
Q 030503 153 YKIPLKQVLVRQNIFILFYRYS 174 (176)
Q Consensus 153 yki~pe~ILVIHDDLDLplGk~ 174 (176)
|++++++|||||||||||+|+.
T Consensus 102 yki~~e~ilVihDdLDLp~G~i 123 (207)
T 3nea_A 102 YKIAPAEILVVHDELDIDSGEI 123 (207)
T ss_dssp HTCCGGGEEEEEEETTSCTTCE
T ss_pred hCCCHHHEEEEEEcCCCCCceE
Confidence 9999999999999999999974
No 5
>3v2i_A PTH, peptidyl-tRNA hydrolase; ssgcid, seattle structural genomics center for infectious DI RNA; HET: CIT; 1.65A {Burkholderia thailandensis E264}
Probab=100.00 E-value=6.4e-43 Score=293.91 Aligned_cols=102 Identities=38% Similarity=0.579 Sum_probs=96.4
Q ss_pred CCceEEEEccCcccccCcCcchHHHHHHHHHHHHhCCCCccc-ceeeEEEEEEECCeeEEEEecCcccccchHHHHHHHH
Q 030503 73 QHPWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSV-NFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVS 151 (176)
Q Consensus 73 ~~~~LIVGLGNPG~kY~~TRHNVGf~vLD~La~~~~~~~~~~-k~~g~~a~~~i~~~~ViLlKP~TYMNlSG~aV~~l~~ 151 (176)
+.++|||||||||++|++|||||||+++|+||++++.++.+. +|++.++++.+++++|+|+||+||||+||++|+++++
T Consensus 21 m~~~LIVGLGNPG~~Y~~TRHNiGf~vvD~La~~~~~~~~~~~kf~~~~~~~~~~g~~v~LlKP~TyMNlSG~aV~~~~~ 100 (222)
T 3v2i_A 21 SMIKLIVGLGNPGAEYTATRHNAGFWLVDQLAREAGATLRDERRFHGFYAKARLYGEEVHLLEPQTYMNRSGQSVVALAH 100 (222)
T ss_dssp -CCCEEEECCCCSGGGTTSGGGHHHHHHHHHHHHHTCCCEEEGGGTEEEEEEEETTEEEEEEEECSCGGGHHHHHHHHHH
T ss_pred ceEEEEEEeCCCchhhCcCchHHHHHHHHHHHHHcCCCcccccccceEEEEEEECCeEEEEEeCCcchhcccHHHHHHHH
Confidence 567999999999999999999999999999999999988654 6889999999999999999999999999999999999
Q ss_pred HcCCCCCcEEEEEecCCCCcccC
Q 030503 152 YYKIPLKQVLVRQNIFILFYRYS 174 (176)
Q Consensus 152 ~yki~pe~ILVIHDDLDLplGk~ 174 (176)
||+|++++|||||||||||+|+.
T Consensus 101 ~yki~~e~ilVihDdLDLp~G~i 123 (222)
T 3v2i_A 101 FFKILPNEILVAHDELDLPPGAV 123 (222)
T ss_dssp HHTCCGGGEEEEEEETTSCTTCE
T ss_pred HhCCCHHHEEEEEecCCCCCceE
Confidence 99999999999999999999974
No 6
>4fyj_A PTH, peptidyl-tRNA hydrolase; 1.77A {Pseudomonas aeruginosa} PDB: 4fno_A 4djj_A* 4erx_A 4dhw_A
Probab=100.00 E-value=7.4e-43 Score=289.36 Aligned_cols=100 Identities=36% Similarity=0.545 Sum_probs=95.0
Q ss_pred ceEEEEccCcccccCcCcchHHHHHHHHHHHHhCCCCcc-cceeeEEEEEEECCeeEEEEecCcccccchHHHHHHHHHc
Q 030503 75 PWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSS-VNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYY 153 (176)
Q Consensus 75 ~~LIVGLGNPG~kY~~TRHNVGf~vLD~La~~~~~~~~~-~k~~g~~a~~~i~~~~ViLlKP~TYMNlSG~aV~~l~~~y 153 (176)
.-|||||||||++|++|||||||+++|+||++++.++.+ .+|++.++++.+++++|+|+||+||||+||++|+++++||
T Consensus 10 ~~lIvGLGNPG~~Y~~TRHNvGf~vlD~La~~~~~~~~~~~k~~~~~~~~~~~g~~v~LlKP~TyMNlSG~aV~~~~~~y 89 (199)
T 4fyj_A 10 VQLIVGLGNPGPEYDQTRHNAGALFVERLAHAQGVSLVADRKYFGLVGKFSHQGKDVRLLIPTTYMNRSGQSVAALAGFF 89 (199)
T ss_dssp CCEEEECCCCSGGGTTCGGGHHHHHHHHHHHHTTCCCEEEGGGTEEEEEEEETTEEEEEEEECSCGGGHHHHHHHHHHHT
T ss_pred eeEEEEeCCCchhhCcCchHHHHHHHHHHHHHcCCCcccccccceEEEEEEECCeEEEEEeCCcchhCChHHHHHHHHHh
Confidence 459999999999999999999999999999999998764 4688999999999999999999999999999999999999
Q ss_pred CCCCCcEEEEEecCCCCcccC
Q 030503 154 KIPLKQVLVRQNIFILFYRYS 174 (176)
Q Consensus 154 ki~pe~ILVIHDDLDLplGk~ 174 (176)
+|++++|||||||||||+|+.
T Consensus 90 ki~~~~ilVihDdldLp~G~i 110 (199)
T 4fyj_A 90 RIAPDAILVAHDELDMPPGVA 110 (199)
T ss_dssp TCCGGGEEEEEEETTSCTTCE
T ss_pred CCCHHHEEEEEecCCCCCceE
Confidence 999999999999999999974
No 7
>4hoy_A PTH, peptidyl-tRNA hydrolase; enzyme, molecular conformation, INH hydrolase; 1.78A {Acinetobacter baumannii} PDB: 4fot_A 4fop_A
Probab=100.00 E-value=1.9e-42 Score=285.56 Aligned_cols=100 Identities=38% Similarity=0.585 Sum_probs=95.3
Q ss_pred ceEEEEccCcccccCcCcchHHHHHHHHHHHHhCCCCcc-cceeeEEEEEEECCeeEEEEecCcccccchHHHHHHHHHc
Q 030503 75 PWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSS-VNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYY 153 (176)
Q Consensus 75 ~~LIVGLGNPG~kY~~TRHNVGf~vLD~La~~~~~~~~~-~k~~g~~a~~~i~~~~ViLlKP~TYMNlSG~aV~~l~~~y 153 (176)
.+|||||||||++|++|||||||+++|.||++++.+++. +++.+.++++.+++++++|+||+||||+||++|+++++||
T Consensus 4 ikLIVGLGNPG~~Y~~TRHNiGf~~ld~La~~~~~~~~~~~k~~~~~~~~~~~~~~v~l~kP~TyMN~SG~aV~~~~~~~ 83 (193)
T 4hoy_A 4 ISLIVGLGNPGSEYAQTRHNAGFWFVEQLADKYGITLKNDPKFHGISGRGNIEGHDVRLLLPMTYMNRSGQSVVPFSKFY 83 (193)
T ss_dssp CCEEEECCCCSTTTTTBGGGHHHHHHHHHHHHTTCCCEEEGGGTEEEEEEEETTEEEEEEEECSCGGGTHHHHHHHHHHT
T ss_pred ceEEEEcCCCchhhCcCcccHHHHHHHHHHHHcCCCccccccccEEEEEEEECCEEEEEEeCCCccccchhhHHHHHHHc
Confidence 579999999999999999999999999999999999865 4788999999999999999999999999999999999999
Q ss_pred CCCCCcEEEEEecCCCCcccC
Q 030503 154 KIPLKQVLVRQNIFILFYRYS 174 (176)
Q Consensus 154 ki~pe~ILVIHDDLDLplGk~ 174 (176)
++++++|||||||||||+|+.
T Consensus 84 ki~~~~ilVihDdldL~~G~i 104 (193)
T 4hoy_A 84 QIAPEAILIAHDELDMNPGVI 104 (193)
T ss_dssp TCCGGGEEEEEEETTSCTTCE
T ss_pred CCCchheEEeeeccccccCce
Confidence 999999999999999999974
No 8
>4fno_A PTH, peptidyl-tRNA hydrolase; 2.25A {Pseudomonas aeruginosa} PDB: 4djj_A* 4erx_A 4dhw_A
Probab=100.00 E-value=5.3e-44 Score=295.18 Aligned_cols=100 Identities=36% Similarity=0.543 Sum_probs=94.8
Q ss_pred ceEEEEccCcccccCcCcchHHHHHHHHHHHHhCCCCc-ccceeeEEEEEEECCeeEEEEecCcccccchHHHHHHHHHc
Q 030503 75 PWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVS-SVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYY 153 (176)
Q Consensus 75 ~~LIVGLGNPG~kY~~TRHNVGf~vLD~La~~~~~~~~-~~k~~g~~a~~~i~~~~ViLlKP~TYMNlSG~aV~~l~~~y 153 (176)
++|||||||||++|++|||||||+++|+||++++.++. +.++++.++++.+++++|+|+||+||||+||++|+++++||
T Consensus 4 m~LIvGLGNPG~~Y~~TRHNiGf~viD~La~~~~~~~~~~~k~~~~~~~~~~~g~~v~LlKP~TyMNlSG~aV~~~~~fy 83 (194)
T 4fno_A 4 VQLIVGLGNPGPEYDQTRHNAGALFVERLAHAQGVSLVADRKYFGLVGKFSHQGKDVRLLIPTTYMNRSGQSVAALAGFF 83 (194)
Confidence 57999999999999999999999999999999998876 45688999998898999999999999999999999999999
Q ss_pred CCCCCcEEEEEecCCCCcccC
Q 030503 154 KIPLKQVLVRQNIFILFYRYS 174 (176)
Q Consensus 154 ki~pe~ILVIHDDLDLplGk~ 174 (176)
+|++++|||||||||||+|+.
T Consensus 84 ki~~~~ilVihDdldLp~G~i 104 (194)
T 4fno_A 84 RIAPDAILVAHDELDMPPGVA 104 (194)
Confidence 999999999999999999974
No 9
>1cfz_A Hydrogenase 2 maturation protease; metzincins, nickel; 2.20A {Escherichia coli} SCOP: c.56.1.1 PDB: 2kml_A
Probab=74.46 E-value=3 Score=32.15 Aligned_cols=30 Identities=27% Similarity=0.377 Sum_probs=23.9
Q ss_pred ceEEEEccCcccccCcCcchHHHHHHHHHHHHhC
Q 030503 75 PWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEG 108 (176)
Q Consensus 75 ~~LIVGLGNPG~kY~~TRHNVGf~vLD~La~~~~ 108 (176)
+.+|+|+||+- ..-==+|..++++|.+++.
T Consensus 2 ~ilVlGiGN~l----~gDDG~G~~v~~~L~~~~~ 31 (162)
T 1cfz_A 2 RILVLGVGNIL----LTDEAIGVRIVEALEQRYI 31 (162)
T ss_dssp CEEEEEESCTT----BGGGGHHHHHHHHHHHHEE
T ss_pred CEEEEEECCcc----cccccHHHHHHHHHHhhCC
Confidence 47999999993 2334699999999998754
No 10
>3pu6_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.60A {Wolinella succinogenes}
Probab=62.98 E-value=7.6 Score=29.84 Aligned_cols=29 Identities=14% Similarity=0.156 Sum_probs=23.1
Q ss_pred ceEEEEccCcccccCcCcchHHHHHHHHHHHHh
Q 030503 75 PWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAE 107 (176)
Q Consensus 75 ~~LIVGLGNPG~kY~~TRHNVGf~vLD~La~~~ 107 (176)
+.+|+|+||+- ..-==+|..++++|.+.+
T Consensus 4 ~ilVlGiGN~L----~gDDG~G~~v~~~L~~~~ 32 (157)
T 3pu6_A 4 KKVLLCVGNEL----RGDDGVAIALGRLVEEQM 32 (157)
T ss_dssp CEEEEEECCTT----BGGGGHHHHHHHHHHHHC
T ss_pred CEEEEEECCcc----cccccHHHHHHHHHHhhC
Confidence 47999999993 344469999999999654
No 11
>2e85_A Hydrogenase 3 maturation protease; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2i8l_A
Probab=62.24 E-value=6.1 Score=30.37 Aligned_cols=29 Identities=17% Similarity=0.149 Sum_probs=23.0
Q ss_pred ceEEEEccCcccccCcCcchHHHHHHHHHHHHh
Q 030503 75 PWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAE 107 (176)
Q Consensus 75 ~~LIVGLGNPG~kY~~TRHNVGf~vLD~La~~~ 107 (176)
+.+|+|+||+- ..-==+|..++++|.+.+
T Consensus 5 ~~lVlGiGN~l----~gDDG~G~~v~~~L~~~~ 33 (159)
T 2e85_A 5 TDVLLCVGNSM----MGDDGAGPLLAEKCAAAP 33 (159)
T ss_dssp CEEEEEECCGG----GGGGGHHHHHHHHHHHSC
T ss_pred CEEEEEECCcc----cccccHHHHHHHHHhhhC
Confidence 36999999993 233469999999999864
No 12
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=51.40 E-value=14 Score=31.67 Aligned_cols=35 Identities=14% Similarity=0.106 Sum_probs=30.4
Q ss_pred cCcccccchHHHHHHHHHcCCCCCcEEEEEecCCC
Q 030503 135 PQTFMNASGQSVGSIVSYYKIPLKQVLVRQNIFIL 169 (176)
Q Consensus 135 P~TYMNlSG~aV~~l~~~yki~pe~ILVIHDDLDL 169 (176)
|...|=-+-+.+.+++...+|..++.||||||-..
T Consensus 90 ~~ph~LP~~~~f~~~l~~lGI~~d~~VVvYD~~~~ 124 (327)
T 3utn_X 90 PYPHMFPTKKVFDDAMSNLGVQKDDILVVYDRVGN 124 (327)
T ss_dssp SSTTCCCCHHHHHHHHHHTTCCTTCEEEEECSSSS
T ss_pred CCCCCCcCHHHHHHHHHHcCCCCCCEEEEEeCCCC
Confidence 45577788899999999999999999999998654
No 13
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=46.35 E-value=9.8 Score=27.72 Aligned_cols=30 Identities=17% Similarity=0.166 Sum_probs=26.5
Q ss_pred chHHHHHHHHHcCCCCCcEEEEEecC--CCCc
Q 030503 142 SGQSVGSIVSYYKIPLKQVLVRQNIF--ILFY 171 (176)
Q Consensus 142 SG~aV~~l~~~yki~pe~ILVIHDDL--DLpl 171 (176)
.+..+..+++.++++++++++|=|.+ |+..
T Consensus 159 k~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~ 190 (234)
T 3ddh_A 159 TEKEYLRLLSILQIAPSELLMVGNSFKSDIQP 190 (234)
T ss_dssp SHHHHHHHHHHHTCCGGGEEEEESCCCCCCHH
T ss_pred CHHHHHHHHHHhCCCcceEEEECCCcHHHhHH
Confidence 68899999999999999999999996 5543
No 14
>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0
Probab=37.48 E-value=21 Score=27.40 Aligned_cols=26 Identities=8% Similarity=0.129 Sum_probs=23.4
Q ss_pred chHHHHHHHHHcCCCCCcEEEEEecC
Q 030503 142 SGQSVGSIVSYYKIPLKQVLVRQNIF 167 (176)
Q Consensus 142 SG~aV~~l~~~yki~pe~ILVIHDDL 167 (176)
-|.++..+++.++++++++++|=|..
T Consensus 201 K~~~l~~l~~~lgi~~~~~i~~GD~~ 226 (274)
T 3fzq_A 201 KGKAIKRLQERLGVTQKETICFGDGQ 226 (274)
T ss_dssp HHHHHHHHHHHHTCCSTTEEEECCSG
T ss_pred HHHHHHHHHHHcCCCHHHEEEECCCh
Confidence 47889999999999999999999865
No 15
>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=36.90 E-value=22 Score=27.41 Aligned_cols=25 Identities=8% Similarity=0.299 Sum_probs=23.0
Q ss_pred hHHHHHHHHHcCCCCCcEEEEEecC
Q 030503 143 GQSVGSIVSYYKIPLKQVLVRQNIF 167 (176)
Q Consensus 143 G~aV~~l~~~yki~pe~ILVIHDDL 167 (176)
|.++..+++.+++++++++.|=|..
T Consensus 196 ~~~l~~l~~~lgi~~~~~ia~GD~~ 220 (268)
T 3r4c_A 196 ATGLSLFADYYRVKVSEIMACGDGG 220 (268)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEECSG
T ss_pred HHHHHHHHHHcCCCHHHEEEECCcH
Confidence 6899999999999999999999864
No 16
>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}
Probab=35.41 E-value=14 Score=27.86 Aligned_cols=30 Identities=10% Similarity=-0.098 Sum_probs=25.5
Q ss_pred chHHHHHHHHHcCCCCCcEEEEEecC--CCCc
Q 030503 142 SGQSVGSIVSYYKIPLKQVLVRQNIF--ILFY 171 (176)
Q Consensus 142 SG~aV~~l~~~yki~pe~ILVIHDDL--DLpl 171 (176)
.|.++..+++.++++++++++|=|.. |++.
T Consensus 192 k~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~ 223 (271)
T 2x4d_A 192 SPEFFKSALQAIGVEAHQAVMIGDDIVGDVGG 223 (271)
T ss_dssp CHHHHHHHHHHHTCCGGGEEEEESCTTTTHHH
T ss_pred CHHHHHHHHHHhCCCcceEEEECCCcHHHHHH
Confidence 47888999999999999999999976 5544
No 17
>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0
Probab=35.24 E-value=24 Score=27.54 Aligned_cols=26 Identities=8% Similarity=0.194 Sum_probs=23.5
Q ss_pred chHHHHHHHHHcCCCCCcEEEEEecC
Q 030503 142 SGQSVGSIVSYYKIPLKQVLVRQNIF 167 (176)
Q Consensus 142 SG~aV~~l~~~yki~pe~ILVIHDDL 167 (176)
-|.++..+++.++++++++++|=|..
T Consensus 203 K~~~l~~l~~~lgi~~~~~i~~GD~~ 228 (290)
T 3dnp_A 203 KEAGLALVASELGLSMDDVVAIGHQY 228 (290)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEECSG
T ss_pred HHHHHHHHHHHcCCCHHHEEEECCch
Confidence 47899999999999999999999864
No 18
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=34.62 E-value=24 Score=27.45 Aligned_cols=25 Identities=8% Similarity=0.174 Sum_probs=23.3
Q ss_pred hHHHHHHHHHcCCCCCcEEEEEecC
Q 030503 143 GQSVGSIVSYYKIPLKQVLVRQNIF 167 (176)
Q Consensus 143 G~aV~~l~~~yki~pe~ILVIHDDL 167 (176)
|.++..+++.++++++++++|=|..
T Consensus 199 ~~~l~~l~~~lgi~~~~~i~~GD~~ 223 (279)
T 4dw8_A 199 ALSLSVLLENIGMTREEVIAIGDGY 223 (279)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEECSG
T ss_pred HHHHHHHHHHcCCCHHHEEEECCCh
Confidence 8999999999999999999999864
No 19
>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0
Probab=33.61 E-value=23 Score=27.52 Aligned_cols=26 Identities=12% Similarity=0.190 Sum_probs=21.8
Q ss_pred chHHHHHHHHHcCCCCCcEEEEEecC
Q 030503 142 SGQSVGSIVSYYKIPLKQVLVRQNIF 167 (176)
Q Consensus 142 SG~aV~~l~~~yki~pe~ILVIHDDL 167 (176)
-|.++..+++.++++++++++|=|..
T Consensus 198 K~~~l~~l~~~lgi~~~~~i~~GD~~ 223 (279)
T 3mpo_A 198 KGGTLSELVDQLGLTADDVMTLGDQG 223 (279)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEC--CC
T ss_pred hHHHHHHHHHHcCCCHHHEEEECCch
Confidence 48899999999999999999999865
No 20
>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}
Probab=33.59 E-value=16 Score=26.89 Aligned_cols=30 Identities=3% Similarity=-0.198 Sum_probs=25.2
Q ss_pred chHHHHHHHHHcCCCCCcEEEEEecC--CCCc
Q 030503 142 SGQSVGSIVSYYKIPLKQVLVRQNIF--ILFY 171 (176)
Q Consensus 142 SG~aV~~l~~~yki~pe~ILVIHDDL--DLpl 171 (176)
++..+..+++.++++++++++|=|.. |+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~ 188 (230)
T 3vay_A 157 DPAPFLEALRRAKVDASAAVHVGDHPSDDIAG 188 (230)
T ss_dssp SHHHHHHHHHHHTCCGGGEEEEESCTTTTHHH
T ss_pred CHHHHHHHHHHhCCCchheEEEeCChHHHHHH
Confidence 46788899999999999999999986 5543
No 21
>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}
Probab=33.48 E-value=27 Score=27.63 Aligned_cols=26 Identities=4% Similarity=0.094 Sum_probs=23.4
Q ss_pred chHHHHHHHHHcCCCCCcEEEEEecC
Q 030503 142 SGQSVGSIVSYYKIPLKQVLVRQNIF 167 (176)
Q Consensus 142 SG~aV~~l~~~yki~pe~ILVIHDDL 167 (176)
-|.++..+++.++++++++++|=|..
T Consensus 212 K~~~l~~l~~~lgi~~~e~ia~GD~~ 237 (283)
T 3dao_A 212 KWTALSYLIDRFDLLPDEVCCFGDNL 237 (283)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEECSG
T ss_pred HHHHHHHHHHHhCCCHHHEEEECCCH
Confidence 47899999999999999999999864
No 22
>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}
Probab=32.86 E-value=28 Score=27.87 Aligned_cols=26 Identities=4% Similarity=0.100 Sum_probs=23.3
Q ss_pred chHHHHHHHHHcCCCCCcEEEEEecC
Q 030503 142 SGQSVGSIVSYYKIPLKQVLVRQNIF 167 (176)
Q Consensus 142 SG~aV~~l~~~yki~pe~ILVIHDDL 167 (176)
-|.++..+++.++++++++++|=|..
T Consensus 229 K~~al~~l~~~lgi~~~e~i~~GDs~ 254 (304)
T 3l7y_A 229 KGWALQQLLKRWNFTSDHLMAFGDGG 254 (304)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEECSG
T ss_pred HHHHHHHHHHHhCcCHHHEEEECCCH
Confidence 36799999999999999999999864
No 23
>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A
Probab=32.37 E-value=23 Score=27.33 Aligned_cols=25 Identities=12% Similarity=0.138 Sum_probs=22.6
Q ss_pred hHHHHHHHHHcCCCCCcEEEEEecC
Q 030503 143 GQSVGSIVSYYKIPLKQVLVRQNIF 167 (176)
Q Consensus 143 G~aV~~l~~~yki~pe~ILVIHDDL 167 (176)
|.++..+++.++++++++++|=|..
T Consensus 185 ~~~l~~l~~~lgi~~~~~ia~GDs~ 209 (258)
T 2pq0_A 185 AEGIRMMIEKLGIDKKDVYAFGDGL 209 (258)
T ss_dssp HHHHHHHHHHHTCCGGGEEEECCSG
T ss_pred HHHHHHHHHHhCCCHHHEEEECCcH
Confidence 7889999999999999999998853
No 24
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=32.35 E-value=29 Score=27.41 Aligned_cols=26 Identities=8% Similarity=0.201 Sum_probs=23.6
Q ss_pred chHHHHHHHHHcCCCCCcEEEEEecC
Q 030503 142 SGQSVGSIVSYYKIPLKQVLVRQNIF 167 (176)
Q Consensus 142 SG~aV~~l~~~yki~pe~ILVIHDDL 167 (176)
-|.++..+++.++++++++++|=|..
T Consensus 210 K~~al~~l~~~lgi~~~~~ia~GD~~ 235 (285)
T 3pgv_A 210 KGHALEAVAKMLGYTLSDCIAFGDGM 235 (285)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEECSG
T ss_pred hHHHHHHHHHHhCCCHHHEEEECCcH
Confidence 38899999999999999999999864
No 25
>3b64_A Macrophage migration inhibitory factor-like protein; cytokine, MIF, LM1740MIF, lmmif, unknown function; 1.03A {Leishmania major}
Probab=30.13 E-value=42 Score=23.39 Aligned_cols=24 Identities=13% Similarity=0.058 Sum_probs=19.7
Q ss_pred HHHHcCCCCCcEEEEEecCCCCccc
Q 030503 149 IVSYYKIPLKQVLVRQNIFILFYRY 173 (176)
Q Consensus 149 l~~~yki~pe~ILVIHDDLDLplGk 173 (176)
+.+..+++++++.|+.+|++ ..|.
T Consensus 84 l~~~lgi~~~~v~I~~~e~~-~wg~ 107 (112)
T 3b64_A 84 ITKECGIVADRIFVLYFSPL-HCGW 107 (112)
T ss_dssp HHHHHCCCGGGEEEEEECCS-CCEE
T ss_pred HHHHhCcCcceEEEEEEEhh-HeeE
Confidence 34567999999999999998 7664
No 26
>1c8b_A Spore protease; novel fold, hydrolase; 3.00A {Bacillus megaterium} SCOP: c.56.1.2
Probab=29.62 E-value=22 Score=31.64 Aligned_cols=75 Identities=21% Similarity=0.251 Sum_probs=46.6
Q ss_pred CceEEEEccCcccccCcCcchHHHHHHHHHH-HH----hCCCCcccceeeEEEEEEECCeeEEEEec----CcccccchH
Q 030503 74 HPWLIVGLGNPGKQYNGTRHNVGFEMVDAIA-EA----EGISVSSVNFKAHFGKGFIGNVPVMLAKP----QTFMNASGQ 144 (176)
Q Consensus 74 ~~~LIVGLGNPG~kY~~TRHNVGf~vLD~La-~~----~~~~~~~~k~~g~~a~~~i~~~~ViLlKP----~TYMNlSG~ 144 (176)
...|||||||. .-|--..|-.+++.|. .+ ++...-. . +-..|.-+-| +|=||. ++
T Consensus 113 ~~iLVVGLGN~----~vTpDALGP~Vv~~l~vTrHl~~~g~~~~~---~--------~~~pVsAiaPGVmg~TGiEt-~E 176 (371)
T 1c8b_A 113 ASCLVVGLGNL----SVTPDALGPKAVDNLLITRHLFELQPESVQ---D--------GFRPVSAIVPGVMGMTGIET-SD 176 (371)
T ss_dssp CCEEEEECSCS----SSGGGCHHHHHHTTCCCCHHHHHHSCCSSC---S--------SCCCEEEECSGGGCCCSSCH-HH
T ss_pred CcEEEEEcCCC----CcCccccCcceeeeeeEEeehhhhCchhhc---c--------CCCceEEecCCccccccccH-HH
Confidence 56899999998 4688889999888663 11 2111000 0 1134555555 566764 57
Q ss_pred HHHHHHHHcCCCCCcEEEEEecC
Q 030503 145 SVGSIVSYYKIPLKQVLVRQNIF 167 (176)
Q Consensus 145 aV~~l~~~yki~pe~ILVIHDDL 167 (176)
.|+.+.++++ | +++|.-|-|
T Consensus 177 iI~gIv~k~k--P-d~VIAIDAL 196 (371)
T 1c8b_A 177 IIFGVVKKVN--P-DFIIAIDAL 196 (371)
T ss_dssp HHHHHHHHHC--C-SEEEEEEEE
T ss_pred HHHHHHHhcC--C-CEEEEEchh
Confidence 7788888665 3 667776754
No 27
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=28.06 E-value=44 Score=24.33 Aligned_cols=26 Identities=12% Similarity=0.078 Sum_probs=23.6
Q ss_pred chHHHHHHHHHcCCCCCcEEEEEecC
Q 030503 142 SGQSVGSIVSYYKIPLKQVLVRQNIF 167 (176)
Q Consensus 142 SG~aV~~l~~~yki~pe~ILVIHDDL 167 (176)
++..+..+++.++++++++++|=|.+
T Consensus 164 ~~~~~~~~~~~lgi~~~~~~~iGD~~ 189 (240)
T 3qnm_A 164 RPEIFHFALSATQSELRESLMIGDSW 189 (240)
T ss_dssp SHHHHHHHHHHTTCCGGGEEEEESCT
T ss_pred CHHHHHHHHHHcCCCcccEEEECCCc
Confidence 57788999999999999999999986
No 28
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=27.92 E-value=40 Score=24.10 Aligned_cols=25 Identities=16% Similarity=0.146 Sum_probs=22.4
Q ss_pred hHHHHHHHHHcCCCCCcEEEEEecC
Q 030503 143 GQSVGSIVSYYKIPLKQVLVRQNIF 167 (176)
Q Consensus 143 G~aV~~l~~~yki~pe~ILVIHDDL 167 (176)
+..+..+++.++++++++++|=|..
T Consensus 145 ~~~l~~~~~~lgi~~~~~~~iGD~~ 169 (211)
T 1l7m_A 145 GEILEKIAKIEGINLEDTVAVGDGA 169 (211)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEECSG
T ss_pred HHHHHHHHHHcCCCHHHEEEEecCh
Confidence 6788999999999999999999874
No 29
>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14
Probab=26.88 E-value=40 Score=24.67 Aligned_cols=26 Identities=4% Similarity=0.036 Sum_probs=23.3
Q ss_pred chHHHHHHHHHcCCCCCcEEEEEecC
Q 030503 142 SGQSVGSIVSYYKIPLKQVLVRQNIF 167 (176)
Q Consensus 142 SG~aV~~l~~~yki~pe~ILVIHDDL 167 (176)
.+.++..+++.++++++++++|=|.+
T Consensus 178 k~~~~~~~~~~lgi~~~~~i~iGD~~ 203 (250)
T 2c4n_A 178 SPWIIRAALNKMQAHSEETVIVGDNL 203 (250)
T ss_dssp STHHHHHHHHHHTCCGGGEEEEESCT
T ss_pred CHHHHHHHHHHcCCCcceEEEECCCc
Confidence 46788999999999999999999984
No 30
>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A
Probab=26.88 E-value=23 Score=25.96 Aligned_cols=29 Identities=3% Similarity=0.009 Sum_probs=24.9
Q ss_pred chHHHHHHHHHcC-CCCCcEEEEEecC--CCC
Q 030503 142 SGQSVGSIVSYYK-IPLKQVLVRQNIF--ILF 170 (176)
Q Consensus 142 SG~aV~~l~~~yk-i~pe~ILVIHDDL--DLp 170 (176)
.+..+..+++.++ ++++++++|=|.. |+.
T Consensus 160 ~~~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~ 191 (238)
T 3ed5_A 160 MKEYFNYVFERIPQFSAEHTLIIGDSLTADIK 191 (238)
T ss_dssp CHHHHHHHHHTSTTCCGGGEEEEESCTTTTHH
T ss_pred ChHHHHHHHHHcCCCChhHeEEECCCcHHHHH
Confidence 4677889999999 9999999999987 554
No 31
>3fwt_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.90A {Leishmania major}
Probab=26.60 E-value=39 Score=24.90 Aligned_cols=25 Identities=16% Similarity=0.143 Sum_probs=20.4
Q ss_pred HHHHHcCCCCCcEEEEEecCCCCccc
Q 030503 148 SIVSYYKIPLKQVLVRQNIFILFYRY 173 (176)
Q Consensus 148 ~l~~~yki~pe~ILVIHDDLDLplGk 173 (176)
.+.+..+++++++.|.++|++ ..|.
T Consensus 104 ~l~~~LgI~~~rvyI~f~d~~-~wg~ 128 (133)
T 3fwt_A 104 AITKECGIPAERIYVFYYSTK-HCGW 128 (133)
T ss_dssp HHHHHHCCCGGGEEEEEEEES-CCEE
T ss_pred HHHHHhCcChhhEEEEEEEhh-hEeE
Confidence 344567999999999999998 7764
No 32
>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A
Probab=25.10 E-value=28 Score=25.55 Aligned_cols=31 Identities=0% Similarity=-0.314 Sum_probs=25.1
Q ss_pred chHHHHHHHHHcCCCCCcEEEEEecC--CCCcc
Q 030503 142 SGQSVGSIVSYYKIPLKQVLVRQNIF--ILFYR 172 (176)
Q Consensus 142 SG~aV~~l~~~yki~pe~ILVIHDDL--DLplG 172 (176)
.+..+..+++.++++++++++|=|.. |+..+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a 189 (234)
T 3u26_A 157 HPRIFELALKKAGVKGEEAVYVGDNPVKDCGGS 189 (234)
T ss_dssp SHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHH
T ss_pred CHHHHHHHHHHcCCCchhEEEEcCCcHHHHHHH
Confidence 45668889999999999999999986 45433
No 33
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=24.14 E-value=32 Score=25.04 Aligned_cols=30 Identities=3% Similarity=0.065 Sum_probs=25.0
Q ss_pred chHHHHHHHHHcCCCCCcEEEEEecC--CCCc
Q 030503 142 SGQSVGSIVSYYKIPLKQVLVRQNIF--ILFY 171 (176)
Q Consensus 142 SG~aV~~l~~~yki~pe~ILVIHDDL--DLpl 171 (176)
.+..+..+++.++++++++++|=|.. |+..
T Consensus 160 ~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~ 191 (235)
T 2om6_A 160 RKEMFEKVLNSFEVKPEESLHIGDTYAEDYQG 191 (235)
T ss_dssp CHHHHHHHHHHTTCCGGGEEEEESCTTTTHHH
T ss_pred CHHHHHHHHHHcCCCccceEEECCChHHHHHH
Confidence 36778899999999999999999987 4543
No 34
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=24.14 E-value=22 Score=27.51 Aligned_cols=26 Identities=4% Similarity=0.075 Sum_probs=22.9
Q ss_pred chHHHHHHHHHcCCCCCcEEEEEecC
Q 030503 142 SGQSVGSIVSYYKIPLKQVLVRQNIF 167 (176)
Q Consensus 142 SG~aV~~l~~~yki~pe~ILVIHDDL 167 (176)
++..+..+++.+++++++++.|=|.+
T Consensus 185 ~~~~~~~~~~~lgi~~~~~~~iGD~~ 210 (266)
T 3pdw_A 185 ESIIMEQAMRVLGTDVSETLMVGDNY 210 (266)
T ss_dssp SSHHHHHHHHHHTCCGGGEEEEESCT
T ss_pred CHHHHHHHHHHcCCChhhEEEECCCc
Confidence 35678899999999999999999985
No 35
>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A
Probab=23.78 E-value=47 Score=25.67 Aligned_cols=26 Identities=12% Similarity=0.175 Sum_probs=22.9
Q ss_pred chHHHHHHHHHcCCCCCcEEEEEecC
Q 030503 142 SGQSVGSIVSYYKIPLKQVLVRQNIF 167 (176)
Q Consensus 142 SG~aV~~l~~~yki~pe~ILVIHDDL 167 (176)
-|.++..+++.++++++++++|=|..
T Consensus 188 K~~~~~~~~~~~~~~~~~~~~iGD~~ 213 (261)
T 2rbk_A 188 KQKGIDEIIRHFGIKLEETMSFGDGG 213 (261)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEECSG
T ss_pred hHHHHHHHHHHcCCCHHHEEEECCCH
Confidence 36788999999999999999999974
No 36
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=23.68 E-value=46 Score=24.22 Aligned_cols=26 Identities=4% Similarity=-0.010 Sum_probs=22.9
Q ss_pred chHHHHHHHHHcCCCCCcEEEEEecC
Q 030503 142 SGQSVGSIVSYYKIPLKQVLVRQNIF 167 (176)
Q Consensus 142 SG~aV~~l~~~yki~pe~ILVIHDDL 167 (176)
.+..+..+++.++++++++++|=|..
T Consensus 144 ~~~~~~~~~~~lgi~~~~~i~iGD~~ 169 (226)
T 3mc1_A 144 KEDVIRYAMESLNIKSDDAIMIGDRE 169 (226)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEESSH
T ss_pred CHHHHHHHHHHhCcCcccEEEECCCH
Confidence 67888999999999999999998863
No 37
>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A
Probab=23.58 E-value=25 Score=26.56 Aligned_cols=30 Identities=0% Similarity=-0.269 Sum_probs=24.8
Q ss_pred chHHHHHHHHHcCCCCCcEEEEEecC--CCCc
Q 030503 142 SGQSVGSIVSYYKIPLKQVLVRQNIF--ILFY 171 (176)
Q Consensus 142 SG~aV~~l~~~yki~pe~ILVIHDDL--DLpl 171 (176)
++..+..+++.++++++++++|=|.. |+..
T Consensus 181 ~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~ 212 (259)
T 2ho4_A 181 EKTFFLEALRDADCAPEEAVMIGDDCRDDVDG 212 (259)
T ss_dssp SHHHHHHHGGGGTCCGGGEEEEESCTTTTHHH
T ss_pred CHHHHHHHHHHcCCChHHEEEECCCcHHHHHH
Confidence 45678888999999999999999986 5543
No 38
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=23.27 E-value=51 Score=23.64 Aligned_cols=25 Identities=4% Similarity=-0.105 Sum_probs=22.1
Q ss_pred hHHHHHHHHHcCCCCCcEEEEEecC
Q 030503 143 GQSVGSIVSYYKIPLKQVLVRQNIF 167 (176)
Q Consensus 143 G~aV~~l~~~yki~pe~ILVIHDDL 167 (176)
+..+..+++.++++++++++|=|..
T Consensus 153 ~~~~~~~~~~~~i~~~~~i~iGD~~ 177 (226)
T 1te2_A 153 PQVYLDCAAKLGVDPLTCVALEDSV 177 (226)
T ss_dssp THHHHHHHHHHTSCGGGEEEEESSH
T ss_pred hHHHHHHHHHcCCCHHHeEEEeCCH
Confidence 6889999999999999999998853
No 39
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=23.18 E-value=90 Score=22.86 Aligned_cols=22 Identities=27% Similarity=0.511 Sum_probs=16.3
Q ss_pred CceEEEEccCcccccCcCcchHHHHHHHHHHHH
Q 030503 74 HPWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEA 106 (176)
Q Consensus 74 ~~~LIVGLGNPG~kY~~TRHNVGf~vLD~La~~ 106 (176)
..++|+|+|. +|..+++.|.+.
T Consensus 40 ~~v~IiG~G~-----------~G~~~a~~L~~~ 61 (183)
T 3c85_A 40 AQVLILGMGR-----------IGTGAYDELRAR 61 (183)
T ss_dssp CSEEEECCSH-----------HHHHHHHHHHHH
T ss_pred CcEEEECCCH-----------HHHHHHHHHHhc
Confidence 4589999985 567777777664
No 40
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=23.03 E-value=57 Score=23.67 Aligned_cols=26 Identities=12% Similarity=0.107 Sum_probs=22.8
Q ss_pred chHHHHHHHHHcCCCCCcEEEEEecC
Q 030503 142 SGQSVGSIVSYYKIPLKQVLVRQNIF 167 (176)
Q Consensus 142 SG~aV~~l~~~yki~pe~ILVIHDDL 167 (176)
.+..+..+++.+++++++++.|=|..
T Consensus 149 ~~~~~~~~~~~l~~~~~~~i~iGD~~ 174 (233)
T 3s6j_A 149 DPDLFLAAAKKIGAPIDECLVIGDAI 174 (233)
T ss_dssp STHHHHHHHHHTTCCGGGEEEEESSH
T ss_pred ChHHHHHHHHHhCCCHHHEEEEeCCH
Confidence 46789999999999999999998864
No 41
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=23.02 E-value=56 Score=23.17 Aligned_cols=26 Identities=8% Similarity=0.018 Sum_probs=22.7
Q ss_pred chHHHHHHHHHcCCCCCcEEEEEecC
Q 030503 142 SGQSVGSIVSYYKIPLKQVLVRQNIF 167 (176)
Q Consensus 142 SG~aV~~l~~~yki~pe~ILVIHDDL 167 (176)
.+..+..+++.++++++++++|=|..
T Consensus 142 ~~~~~~~~~~~~~~~~~~~i~iGD~~ 167 (216)
T 2pib_A 142 DPEIYLLVLERLNVVPEKVVVFEDSK 167 (216)
T ss_dssp STHHHHHHHHHHTCCGGGEEEEECSH
T ss_pred CcHHHHHHHHHcCCCCceEEEEeCcH
Confidence 56788999999999999999998863
No 42
>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A
Probab=23.02 E-value=50 Score=25.85 Aligned_cols=26 Identities=4% Similarity=0.165 Sum_probs=23.2
Q ss_pred chHHHHHHHHHcCCCCCcEEEEEecC
Q 030503 142 SGQSVGSIVSYYKIPLKQVLVRQNIF 167 (176)
Q Consensus 142 SG~aV~~l~~~yki~pe~ILVIHDDL 167 (176)
-|.++..+++.++++++++++|=|..
T Consensus 192 K~~~~~~l~~~l~i~~~~~~~~GD~~ 217 (271)
T 1rlm_A 192 KANGISRLLKRWDLSPQNVVAIGDSG 217 (271)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEECSG
T ss_pred hHHHHHHHHHHhCCCHHHEEEECCcH
Confidence 47889999999999999999999864
No 43
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=22.89 E-value=40 Score=25.40 Aligned_cols=30 Identities=13% Similarity=0.216 Sum_probs=25.5
Q ss_pred chHHHHHHHHHcCCCCCcEEEEEecC--CCCc
Q 030503 142 SGQSVGSIVSYYKIPLKQVLVRQNIF--ILFY 171 (176)
Q Consensus 142 SG~aV~~l~~~yki~pe~ILVIHDDL--DLpl 171 (176)
.+..+..+++.++++++++++|=|.. |+..
T Consensus 164 ~~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~ 195 (251)
T 2pke_A 164 DPQTYARVLSEFDLPAERFVMIGNSLRSDVEP 195 (251)
T ss_dssp SHHHHHHHHHHHTCCGGGEEEEESCCCCCCHH
T ss_pred CHHHHHHHHHHhCcCchhEEEECCCchhhHHH
Confidence 47888999999999999999999987 5543
No 44
>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}
Probab=22.81 E-value=60 Score=23.83 Aligned_cols=24 Identities=8% Similarity=-0.015 Sum_probs=21.8
Q ss_pred hHHHHHHHHHcCCCCCcEEEEEec
Q 030503 143 GQSVGSIVSYYKIPLKQVLVRQNI 166 (176)
Q Consensus 143 G~aV~~l~~~yki~pe~ILVIHDD 166 (176)
+..+..+++.++++++++++|=|.
T Consensus 172 ~~~~~~~~~~lgi~~~~~~~iGD~ 195 (254)
T 3umg_A 172 PQAYLRTAQVLGLHPGEVMLAAAH 195 (254)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEESC
T ss_pred HHHHHHHHHHcCCChHHEEEEeCC
Confidence 678889999999999999999886
No 45
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=22.64 E-value=55 Score=23.16 Aligned_cols=25 Identities=4% Similarity=0.077 Sum_probs=22.4
Q ss_pred chHHHHHHHHHcCCCCCcEEEEEec
Q 030503 142 SGQSVGSIVSYYKIPLKQVLVRQNI 166 (176)
Q Consensus 142 SG~aV~~l~~~yki~pe~ILVIHDD 166 (176)
+++.+..+++.++++++++++|=|.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~iGD~ 171 (214)
T 3e58_A 147 NPEIYLTALKQLNVQASRALIIEDS 171 (214)
T ss_dssp SSHHHHHHHHHHTCCGGGEEEEECS
T ss_pred ChHHHHHHHHHcCCChHHeEEEecc
Confidence 6678899999999999999999886
No 46
>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}
Probab=22.40 E-value=55 Score=24.29 Aligned_cols=25 Identities=12% Similarity=0.127 Sum_probs=22.0
Q ss_pred chHHHHHHHHHcCCCCCcEEEEEec
Q 030503 142 SGQSVGSIVSYYKIPLKQVLVRQNI 166 (176)
Q Consensus 142 SG~aV~~l~~~yki~pe~ILVIHDD 166 (176)
.+..+..+++.++++++++++|=|.
T Consensus 175 ~~~~~~~~~~~lgi~~~~~~~iGD~ 199 (254)
T 3umc_A 175 DPQVYLGACRLLDLPPQEVMLCAAH 199 (254)
T ss_dssp SHHHHHHHHHHHTCCGGGEEEEESC
T ss_pred CHHHHHHHHHHcCCChHHEEEEcCc
Confidence 4678889999999999999999885
No 47
>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6
Probab=21.91 E-value=55 Score=23.77 Aligned_cols=26 Identities=8% Similarity=0.055 Sum_probs=22.6
Q ss_pred chHHHHHHHHHcCCCCCcEEEEEecC
Q 030503 142 SGQSVGSIVSYYKIPLKQVLVRQNIF 167 (176)
Q Consensus 142 SG~aV~~l~~~yki~pe~ILVIHDDL 167 (176)
.+..+..+++.++++++++++|=|..
T Consensus 145 k~~~~~~~~~~l~~~~~~~i~iGD~~ 170 (229)
T 2fdr_A 145 KPDIFLHGAAQFGVSPDRVVVVEDSV 170 (229)
T ss_dssp SSHHHHHHHHHHTCCGGGEEEEESSH
T ss_pred CHHHHHHHHHHcCCChhHeEEEcCCH
Confidence 56788999999999999999998853
No 48
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=21.81 E-value=56 Score=25.77 Aligned_cols=26 Identities=19% Similarity=0.385 Sum_probs=22.9
Q ss_pred chHHHHHHHHHcCCCCCcEEEEEecC
Q 030503 142 SGQSVGSIVSYYKIPLKQVLVRQNIF 167 (176)
Q Consensus 142 SG~aV~~l~~~yki~pe~ILVIHDDL 167 (176)
-|.++..+++.++++++++++|=|..
T Consensus 217 K~~~~~~~~~~~~~~~~~~~~~GD~~ 242 (288)
T 1nrw_A 217 KGQALKRLAKQLNIPLEETAAVGDSL 242 (288)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEESSG
T ss_pred hHHHHHHHHHHhCCCHHHEEEEcCCH
Confidence 46789999999999999999999864
No 49
>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10
Probab=21.65 E-value=54 Score=25.91 Aligned_cols=26 Identities=15% Similarity=0.204 Sum_probs=23.2
Q ss_pred chHHHHHHHHHcCCCCCcEEEEEecC
Q 030503 142 SGQSVGSIVSYYKIPLKQVLVRQNIF 167 (176)
Q Consensus 142 SG~aV~~l~~~yki~pe~ILVIHDDL 167 (176)
-|.++..+++.++++++++++|=|+.
T Consensus 199 K~~~l~~l~~~~~~~~~~~~~~GD~~ 224 (282)
T 1rkq_A 199 KGTGVKSLADVLGIKPEEIMAIGDQE 224 (282)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEECSG
T ss_pred CHHHHHHHHHHhCCCHHHEEEECCcH
Confidence 47889999999999999999999874
No 50
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=21.54 E-value=56 Score=24.02 Aligned_cols=26 Identities=12% Similarity=0.037 Sum_probs=23.0
Q ss_pred chHHHHHHHHHcCCCCCcEEEEEecC
Q 030503 142 SGQSVGSIVSYYKIPLKQVLVRQNIF 167 (176)
Q Consensus 142 SG~aV~~l~~~yki~pe~ILVIHDDL 167 (176)
.+..+..+++.++++++++++|=|..
T Consensus 162 ~~~~~~~~~~~lg~~~~~~i~vGD~~ 187 (237)
T 4ex6_A 162 HPDMALHVARGLGIPPERCVVIGDGV 187 (237)
T ss_dssp SSHHHHHHHHHHTCCGGGEEEEESSH
T ss_pred CHHHHHHHHHHcCCCHHHeEEEcCCH
Confidence 56889999999999999999998864
No 51
>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*
Probab=21.15 E-value=62 Score=25.10 Aligned_cols=26 Identities=15% Similarity=0.084 Sum_probs=23.3
Q ss_pred chHHHHHHHHHcCCCCCcEEEEEecC
Q 030503 142 SGQSVGSIVSYYKIPLKQVLVRQNIF 167 (176)
Q Consensus 142 SG~aV~~l~~~yki~pe~ILVIHDDL 167 (176)
-|.++..+++.+++++++++.+=|+.
T Consensus 163 K~~~l~~l~~~~~~~~~~~~~~GD~~ 188 (244)
T 1s2o_A 163 KGNATQYLQQHLAMEPSQTLVCGDSG 188 (244)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEECSG
T ss_pred hHHHHHHHHHHhCCCHHHEEEECCch
Confidence 47899999999999999999999863
No 52
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=20.99 E-value=64 Score=23.40 Aligned_cols=26 Identities=0% Similarity=0.050 Sum_probs=22.5
Q ss_pred chHHHHHHHHHcCCCCCcEEEEEecC
Q 030503 142 SGQSVGSIVSYYKIPLKQVLVRQNIF 167 (176)
Q Consensus 142 SG~aV~~l~~~yki~pe~ILVIHDDL 167 (176)
.+..+..+++.++++++++++|=|..
T Consensus 129 ~~~~~~~~~~~~g~~~~~~i~iGD~~ 154 (205)
T 3m9l_A 129 HPGGLLKLAEAWDVSPSRMVMVGDYR 154 (205)
T ss_dssp SSHHHHHHHHHTTCCGGGEEEEESSH
T ss_pred CHHHHHHHHHHcCCCHHHEEEECCCH
Confidence 45688999999999999999998854
No 53
>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10
Probab=20.95 E-value=61 Score=26.20 Aligned_cols=26 Identities=23% Similarity=0.247 Sum_probs=23.3
Q ss_pred chHHHHHHHHHcCCCCCcEEEEEecC
Q 030503 142 SGQSVGSIVSYYKIPLKQVLVRQNIF 167 (176)
Q Consensus 142 SG~aV~~l~~~yki~pe~ILVIHDDL 167 (176)
-|.++..+++.++++++++++|=|..
T Consensus 225 K~~~l~~l~~~~~~~~~~~~~~GD~~ 250 (301)
T 2b30_A 225 KYTGINYLLKHYNISNDQVLVVGDAE 250 (301)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEECSG
T ss_pred cHHHHHHHHHHcCCCHHHEEEECCCH
Confidence 47899999999999999999999874
No 54
>4dh4_A MIF; trimer, isomerase; 1.82A {Toxoplasma gondii}
Probab=20.83 E-value=61 Score=22.70 Aligned_cols=19 Identities=5% Similarity=-0.026 Sum_probs=16.2
Q ss_pred HHHcCCCCCcEEEEEecCC
Q 030503 150 VSYYKIPLKQVLVRQNIFI 168 (176)
Q Consensus 150 ~~~yki~pe~ILVIHDDLD 168 (176)
.+..+++++++.|..+|++
T Consensus 85 ~~~Lgi~~~riyI~f~d~~ 103 (114)
T 4dh4_A 85 ERHLGVPKNRIYTTFTNKS 103 (114)
T ss_dssp HHHHCCCGGGEEEEEEEEC
T ss_pred HHHhCcCcccEEEEEEeCC
Confidence 3457999999999999986
No 55
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=20.83 E-value=67 Score=23.21 Aligned_cols=25 Identities=4% Similarity=0.001 Sum_probs=21.8
Q ss_pred chHHHHHHHHHcCCCCCcEEEEEec
Q 030503 142 SGQSVGSIVSYYKIPLKQVLVRQNI 166 (176)
Q Consensus 142 SG~aV~~l~~~yki~pe~ILVIHDD 166 (176)
++..+..+++.++++++++++|=|.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~i~vGD~ 164 (209)
T 2hdo_A 140 DPLPLLTALEKVNVAPQNALFIGDS 164 (209)
T ss_dssp SSHHHHHHHHHTTCCGGGEEEEESS
T ss_pred CcHHHHHHHHHcCCCcccEEEECCC
Confidence 3677889999999999999999886
No 56
>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}
Probab=20.72 E-value=59 Score=25.46 Aligned_cols=26 Identities=8% Similarity=0.107 Sum_probs=23.1
Q ss_pred chHHHHHHHHHcCCCCCcEEEEEecC
Q 030503 142 SGQSVGSIVSYYKIPLKQVLVRQNIF 167 (176)
Q Consensus 142 SG~aV~~l~~~yki~pe~ILVIHDDL 167 (176)
-|.++..+++.++++++++++|=|+.
T Consensus 212 k~~~~~~~~~~~~~~~~~~~~~GDs~ 237 (289)
T 3gyg_A 212 KNEIVTFMLEKYNLNTERAIAFGDSG 237 (289)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEECSG
T ss_pred HHHHHHHHHHHcCCChhhEEEEcCCH
Confidence 46889999999999999999999864
No 57
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=20.64 E-value=66 Score=23.94 Aligned_cols=26 Identities=8% Similarity=-0.056 Sum_probs=22.5
Q ss_pred chHHHHHHHHHcCCCCCcEEEEEecC
Q 030503 142 SGQSVGSIVSYYKIPLKQVLVRQNIF 167 (176)
Q Consensus 142 SG~aV~~l~~~yki~pe~ILVIHDDL 167 (176)
.+..+..+++.++++++++++|=|..
T Consensus 168 ~~~~~~~~~~~lg~~~~~~i~vGD~~ 193 (243)
T 3qxg_A 168 NPEPYLMALKKGGLKADEAVVIENAP 193 (243)
T ss_dssp SSHHHHHHHHHTTCCGGGEEEEECSH
T ss_pred ChHHHHHHHHHcCCCHHHeEEEeCCH
Confidence 35778899999999999999998864
No 58
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=20.36 E-value=95 Score=19.30 Aligned_cols=21 Identities=5% Similarity=-0.047 Sum_probs=17.1
Q ss_pred HHHHHcCCCCCcEEEEEecCC
Q 030503 148 SIVSYYKIPLKQVLVRQNIFI 168 (176)
Q Consensus 148 ~l~~~yki~pe~ILVIHDDLD 168 (176)
.+.+.++++++++.|+.+|++
T Consensus 25 ~~~~~lg~~~~~v~V~i~E~~ 45 (62)
T 3m20_A 25 VAAEIYGMDRSAITILIHEPP 45 (62)
T ss_dssp HHHHHHTCCTTSCEEEEECCC
T ss_pred HHHHHhCcCcceEEEEEEEeC
Confidence 344567999999999999985
No 59
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=20.35 E-value=65 Score=23.37 Aligned_cols=26 Identities=4% Similarity=-0.081 Sum_probs=22.2
Q ss_pred chHHHHHHHHHcCCCCCcEEEEEecC
Q 030503 142 SGQSVGSIVSYYKIPLKQVLVRQNIF 167 (176)
Q Consensus 142 SG~aV~~l~~~yki~pe~ILVIHDDL 167 (176)
.+..+..+++.++++++++++|=|..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~iGD~~ 179 (230)
T 3um9_A 154 HQKVYELAMDTLHLGESEILFVSCNS 179 (230)
T ss_dssp CHHHHHHHHHHHTCCGGGEEEEESCH
T ss_pred ChHHHHHHHHHhCCCcccEEEEeCCH
Confidence 46778899999999999999998753
No 60
>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}
Probab=20.24 E-value=64 Score=23.72 Aligned_cols=26 Identities=12% Similarity=-0.061 Sum_probs=22.5
Q ss_pred chHHHHHHHHHcCCCCCcEEEEEecC
Q 030503 142 SGQSVGSIVSYYKIPLKQVLVRQNIF 167 (176)
Q Consensus 142 SG~aV~~l~~~yki~pe~ILVIHDDL 167 (176)
.+..+..+++.++++++++++|=|..
T Consensus 167 ~~~~~~~~~~~lg~~~~~~i~vGD~~ 192 (247)
T 3dv9_A 167 NPEPYLMALKKGGFKPNEALVIENAP 192 (247)
T ss_dssp SSHHHHHHHHHHTCCGGGEEEEECSH
T ss_pred CCHHHHHHHHHcCCChhheEEEeCCH
Confidence 45778899999999999999998864
No 61
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=20.12 E-value=69 Score=22.99 Aligned_cols=24 Identities=0% Similarity=-0.133 Sum_probs=21.1
Q ss_pred hHHHHHHHHHcCCCCCcEEEEEec
Q 030503 143 GQSVGSIVSYYKIPLKQVLVRQNI 166 (176)
Q Consensus 143 G~aV~~l~~~yki~pe~ILVIHDD 166 (176)
+..+..+++.++++++++++|=|.
T Consensus 148 ~~~~~~~~~~lgi~~~~~i~iGD~ 171 (221)
T 2wf7_A 148 PDIFIAAAHAVGVAPSESIGLEDS 171 (221)
T ss_dssp SHHHHHHHHHTTCCGGGEEEEESS
T ss_pred hHHHHHHHHHcCCChhHeEEEeCC
Confidence 567888999999999999999775
Done!