Your job contains 1 sequence.
>030504
MALPSQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGSTD
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 030504
(176 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2161600 - symbol:RAN3 "RAN GTPase 3" species:3... 942 1.1e-94 1
TAIR|locus:2147700 - symbol:RAN-1 "RAS-related nuclear pr... 941 1.4e-94 1
TAIR|locus:2147715 - symbol:RAN2 "RAS-related GTP-binding... 941 1.4e-94 1
SGD|S000005711 - symbol:GSP2 "GTP binding protein (mammal... 782 1.0e-77 1
SGD|S000004284 - symbol:GSP1 "Ran GTPase" species:4932 "S... 765 6.3e-76 1
WB|WBGene00004302 - symbol:ran-1 species:6239 "Caenorhabd... 761 1.7e-75 1
UNIPROTKB|O17915 - symbol:ran-1 "GTP-binding nuclear prot... 761 1.7e-75 1
CGD|CAL0005360 - symbol:GSP1 species:5476 "Candida albica... 753 1.2e-74 1
UNIPROTKB|Q59P43 - symbol:GSP1 "RAN-like GTP binding prot... 753 1.2e-74 1
FB|FBgn0020255 - symbol:Ran "Ran" species:7227 "Drosophil... 752 1.5e-74 1
ASPGD|ASPL0000033427 - symbol:ran species:162425 "Emerice... 749 3.1e-74 1
TAIR|locus:2161685 - symbol:RAN4 "ras-related nuclear pro... 740 2.8e-73 1
UNIPROTKB|F1NEV9 - symbol:RAN "GTP-binding nuclear protei... 734 1.2e-72 1
UNIPROTKB|P42558 - symbol:RAN "GTP-binding nuclear protei... 733 1.6e-72 1
UNIPROTKB|Q3T054 - symbol:RAN "GTP-binding nuclear protei... 733 1.6e-72 1
UNIPROTKB|P62825 - symbol:RAN "GTP-binding nuclear protei... 733 1.6e-72 1
UNIPROTKB|P62826 - symbol:RAN "GTP-binding nuclear protei... 733 1.6e-72 1
UNIPROTKB|F1RFQ7 - symbol:RAN "GTP-binding nuclear protei... 733 1.6e-72 1
UNIPROTKB|P52301 - symbol:ran "GTP-binding nuclear protei... 733 1.6e-72 1
MGI|MGI:1333112 - symbol:Ran "RAN, member RAS oncogene fa... 733 1.6e-72 1
POMBASE|SPBC1289.03c - symbol:spi1 "Ran GTPase Spi1" spec... 733 1.6e-72 1
RGD|620367 - symbol:Ran "RAN, member RAS oncogene family"... 733 1.6e-72 1
UNIPROTKB|P62828 - symbol:Ran "GTP-binding nuclear protei... 733 1.6e-72 1
ZFIN|ZDB-GENE-990415-88 - symbol:ran "ras-related nuclear... 730 3.2e-72 1
UNIPROTKB|J3KQE5 - symbol:RAN "GTP-binding nuclear protei... 728 5.3e-72 1
UNIPROTKB|F5H018 - symbol:RAN "GTP-binding nuclear protei... 723 1.8e-71 1
UNIPROTKB|F1PR82 - symbol:RAN "GTP-binding nuclear protei... 722 2.3e-71 1
UNIPROTKB|B5MDF5 - symbol:RAN "GTP-binding nuclear protei... 412 1.4e-70 2
RGD|1306195 - symbol:RGD1306195 "similar to RAN protein" ... 714 1.6e-70 1
RGD|2314256 - symbol:Rasl2-9 "RAS-like, family 2, locus 9... 704 1.8e-69 1
UNIPROTKB|G5E619 - symbol:LOC786258 "Uncharacterized prot... 699 6.3e-69 1
MGI|MGI:104605 - symbol:Rasl2-9 "RAS-like, family 2, locu... 699 6.3e-69 1
GENEDB_PFALCIPARUM|PF11_0183 - symbol:PF11_0183 "GTP-bind... 693 2.7e-68 1
UNIPROTKB|Q7KQK6 - symbol:Ran "GTP-binding nuclear protei... 693 2.7e-68 1
UNIPROTKB|G3MZP2 - symbol:RAN "GTP-binding nuclear protei... 689 7.2e-68 1
DICTYBASE|DDB_G0291235 - symbol:ranA "GTP-binding nuclear... 680 6.5e-67 1
FB|FBgn0036497 - symbol:Ran-like "Ran-like" species:7227 ... 560 3.4e-54 1
DICTYBASE|DDB_G0274943 - symbol:ranB "GTP-binding nuclear... 505 4.7e-48 1
UNIPROTKB|B4DV51 - symbol:RAN "cDNA, FLJ79092, highly sim... 386 9.2e-36 1
UNIPROTKB|H0YFC6 - symbol:RAN "GTP-binding nuclear protei... 316 2.4e-28 1
UNIPROTKB|O97572 - symbol:RAB7A "Ras-related protein Rab-... 290 1.4e-25 1
UNIPROTKB|E1C0F3 - symbol:RAB7A "Uncharacterized protein"... 289 1.8e-25 1
UNIPROTKB|F1MJQ1 - symbol:RAB7A "Ras-related protein Rab-... 289 1.8e-25 1
UNIPROTKB|P18067 - symbol:RAB7A "Ras-related protein Rab-... 289 1.8e-25 1
UNIPROTKB|P51149 - symbol:RAB7A "Ras-related protein Rab-... 289 1.8e-25 1
UNIPROTKB|Q5R9Y4 - symbol:RAB7A "Ras-related protein Rab-... 289 1.8e-25 1
MGI|MGI:105068 - symbol:Rab7 "RAB7, member RAS oncogene f... 289 1.8e-25 1
RGD|61908 - symbol:Rab7a "RAB7A, member RAS oncogene fami... 289 1.8e-25 1
ZFIN|ZDB-GENE-040426-1352 - symbol:rab7 "RAB7, member RAS... 287 2.9e-25 1
UNIPROTKB|Q3T0F5 - symbol:RAB7A "Ras-related protein Rab-... 285 4.6e-25 1
ZFIN|ZDB-GENE-040704-16 - symbol:zgc:91909 "zgc:91909" sp... 285 4.6e-25 1
ZFIN|ZDB-GENE-040927-2 - symbol:zgc:100918 "zgc:100918" s... 281 1.2e-24 1
FB|FBgn0015793 - symbol:Rab19 "Rab19" species:7227 "Droso... 278 2.6e-24 1
UNIPROTKB|F1NTT5 - symbol:RAB23 "Uncharacterized protein"... 272 1.1e-23 1
FB|FBgn0015795 - symbol:Rab7 "Rab7" species:7227 "Drosoph... 267 3.8e-23 1
DICTYBASE|DDB_G0277101 - symbol:rab11C "Rab GTPase" speci... 265 6.1e-23 1
WB|WBGene00004271 - symbol:rab-7 species:6239 "Caenorhabd... 265 6.1e-23 1
DICTYBASE|DDB_G0277441 - symbol:rabJ "Rab GTPase" species... 262 1.3e-22 1
MGI|MGI:1890695 - symbol:Rab9 "RAB9, member RAS oncogene ... 262 1.3e-22 1
RGD|619740 - symbol:Rab9a "RAB9A, member RAS oncogene fam... 262 1.3e-22 1
UNIPROTKB|Q99P75 - symbol:Rab9a "Ras-related protein Rab-... 262 1.3e-22 1
TAIR|locus:2140045 - symbol:RABH1c "RAB GTPase homolog H1... 261 1.6e-22 1
UNIPROTKB|Q17QB7 - symbol:RAB30 "Ras-related protein Rab-... 259 2.6e-22 1
UNIPROTKB|E2RG98 - symbol:RAB30 "Uncharacterized protein"... 259 2.6e-22 1
UNIPROTKB|Q15771 - symbol:RAB30 "Ras-related protein Rab-... 259 2.6e-22 1
MGI|MGI:1923235 - symbol:Rab30 "RAB30, member RAS oncogen... 259 2.6e-22 1
UNIPROTKB|D4AA97 - symbol:Rab30 "RAB30, member RAS oncoge... 259 2.6e-22 1
UNIPROTKB|F1NWF1 - symbol:RAB30 "Uncharacterized protein"... 258 3.4e-22 1
FB|FBgn0086913 - symbol:Rab26 "Rab26" species:7227 "Droso... 258 3.8e-22 1
UNIPROTKB|E2QWS2 - symbol:RAB23 "Uncharacterized protein"... 257 4.3e-22 1
UNIPROTKB|Q08DW1 - symbol:RAB9A "RAB9A, member RAS oncoge... 256 5.5e-22 1
UNIPROTKB|E9PMJ1 - symbol:RAB30 "Ras-related protein Rab-... 256 5.5e-22 1
UNIPROTKB|Q9ULC3 - symbol:RAB23 "Ras-related protein Rab-... 256 5.5e-22 1
DICTYBASE|DDB_G0269236 - symbol:rab7A "Rab GTPase" specie... 255 7.0e-22 1
FB|FBgn0037364 - symbol:Rab23 "Rab23" species:7227 "Droso... 255 7.0e-22 1
UNIPROTKB|F1P278 - symbol:RAB19 "Uncharacterized protein"... 255 7.0e-22 1
UNIPROTKB|Q5ZIT5 - symbol:RAB10 "Ras-related protein Rab-... 255 7.0e-22 1
UNIPROTKB|F1SRI1 - symbol:RAB9A "Uncharacterized protein"... 255 7.0e-22 1
UNIPROTKB|K7GKQ1 - symbol:RAB9A "Uncharacterized protein"... 255 7.0e-22 1
WB|WBGene00004268 - symbol:rab-5 species:6239 "Caenorhabd... 255 7.0e-22 1
UNIPROTKB|P91857 - symbol:rab-5 "Protein RAB-5" species:6... 255 7.0e-22 1
UNIPROTKB|E1BAI0 - symbol:RAB23 "Uncharacterized protein"... 254 9.0e-22 1
UNIPROTKB|E2QW69 - symbol:RAB5B "Uncharacterized protein"... 253 1.1e-21 1
UNIPROTKB|P61020 - symbol:RAB5B "Ras-related protein Rab-... 253 1.1e-21 1
UNIPROTKB|Q5RBG1 - symbol:RAB5B "Ras-related protein Rab-... 253 1.1e-21 1
MGI|MGI:105938 - symbol:Rab5b "RAB5B, member RAS oncogene... 253 1.1e-21 1
ZFIN|ZDB-GENE-040426-2593 - symbol:rab5b "RAB5B, member R... 253 1.1e-21 1
UNIPROTKB|F1RZV2 - symbol:RAB23 "Uncharacterized protein"... 252 1.5e-21 1
UNIPROTKB|P24408 - symbol:RAB9A "Ras-related protein Rab-... 251 1.9e-21 1
UNIPROTKB|P51151 - symbol:RAB9A "Ras-related protein Rab-... 251 1.9e-21 1
MGI|MGI:103292 - symbol:Rab19 "RAB19, member RAS oncogene... 251 1.9e-21 1
TAIR|locus:2164905 - symbol:RABG1 "RAB GTPase homolog G1"... 251 1.9e-21 1
GENEDB_PFALCIPARUM|PFL1500w - symbol:Rab2 "Rab2, GTPase" ... 250 2.4e-21 1
MGI|MGI:99833 - symbol:Rab23 "RAB23, member RAS oncogene ... 250 2.4e-21 1
RGD|1306867 - symbol:Rab23 "RAB23, member RAS oncogene fa... 250 2.4e-21 1
ZFIN|ZDB-GENE-040718-304 - symbol:rab10 "RAB10, member RA... 250 2.4e-21 1
ZFIN|ZDB-GENE-050522-328 - symbol:rab23 "RAB23, member RA... 250 2.4e-21 1
UNIPROTKB|Q5F3R8 - symbol:RAB11B "Uncharacterized protein... 249 3.0e-21 1
UNIPROTKB|Q5ZMI5 - symbol:RAB9A "Uncharacterized protein"... 249 3.0e-21 1
UNIPROTKB|F1MNI4 - symbol:RAB5B "Uncharacterized protein"... 249 3.0e-21 1
WARNING: Descriptions of 1576 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2161600 [details] [associations]
symbol:RAN3 "RAN GTPase 3" species:3702 "Arabidopsis
thaliana" [GO:0003924 "GTPase activity" evidence=IEA;ISS]
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006184 "GTP catabolic process" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006913 "nucleocytoplasmic transport" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0006406 "mRNA export from
nucleus" evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA;TAS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001806 InterPro:IPR002041 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00627 PROSITE:PS51418 SMART:SM00176
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0009506 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0007264
GO:GO:0003924 GO:GO:0006606 eggNOG:COG1100 EMBL:AB010071
HOGENOM:HOG000216664 KO:K07936 ProtClustDB:PLN03071 EMBL:X97381
EMBL:U73810 EMBL:U75601 EMBL:AF017991 EMBL:AY042796 EMBL:AY050317
EMBL:AY116939 EMBL:BT000723 IPI:IPI00547198 RefSeq:NP_200330.1
UniGene:At.20354 ProteinModelPortal:Q8H156 SMR:Q8H156 IntAct:Q8H156
STRING:Q8H156 PaxDb:Q8H156 PRIDE:Q8H156 EnsemblPlants:AT5G55190.1
GeneID:835612 KEGG:ath:AT5G55190 GeneFarm:5098 TAIR:At5g55190
InParanoid:Q8H156 OMA:DANLHFV PhylomeDB:Q8H156
Genevestigator:Q8H156 GermOnline:AT5G55190 Uniprot:Q8H156
Length = 221
Score = 942 (336.7 bits), Expect = 1.1e-94, P = 1.1e-94
Identities = 172/176 (97%), Positives = 174/176 (98%)
Query: 1 MALPSQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
MALP+QQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1 MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
Query: 61 KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61 KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGSTD 176
VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG +
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDAN 176
>TAIR|locus:2147700 [details] [associations]
symbol:RAN-1 "RAS-related nuclear protein-1" species:3702
"Arabidopsis thaliana" [GO:0003924 "GTPase activity"
evidence=IEA;ISS] [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006184 "GTP catabolic
process" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005618 "cell wall" evidence=IDA] [GO:0046686 "response to
cadmium ion" evidence=IEP] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009651 "response to salt stress" evidence=IEP]
[GO:0048046 "apoplast" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0006606 "protein import into nucleus" evidence=TAS]
InterPro:IPR001806 InterPro:IPR002041 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00627 PROSITE:PS51418 SMART:SM00176
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005886
GO:GO:0005634 GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0005618 GO:GO:0046686 GO:GO:0007264 GO:GO:0048046
GO:GO:0009651 GO:GO:0003924 GO:GO:0006606 eggNOG:COG1100
UniGene:At.18604 EMBL:AF296836 HOGENOM:HOG000216664 KO:K07936
OMA:PEVHIDI EMBL:L16789 EMBL:X97379 EMBL:AF428417 EMBL:AY125542
EMBL:AY088774 IPI:IPI00543782 RefSeq:NP_197501.1 UniGene:At.23000
ProteinModelPortal:P41916 SMR:P41916 IntAct:P41916
MINT:MINT-1163760 STRING:P41916 PaxDb:P41916 PRIDE:P41916
EnsemblPlants:AT5G20010.1 GeneID:832123 KEGG:ath:AT5G20010
TAIR:At5g20010 InParanoid:P41916 ProtClustDB:PLN03071
Genevestigator:P41916 GermOnline:AT5G20010 Uniprot:P41916
Length = 221
Score = 941 (336.3 bits), Expect = 1.4e-94, P = 1.4e-94
Identities = 172/173 (99%), Positives = 173/173 (100%)
Query: 1 MALPSQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
MALP+QQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1 MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
Query: 61 KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61 KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 173
VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 173
>TAIR|locus:2147715 [details] [associations]
symbol:RAN2 "RAS-related GTP-binding nuclear protein 2"
species:3702 "Arabidopsis thaliana" [GO:0003924 "GTPase activity"
evidence=IEA;ISS] [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006184 "GTP catabolic
process" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006606 "protein import into nucleus"
evidence=TAS] InterPro:IPR001806 InterPro:IPR002041
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00627 PROSITE:PS51418
SMART:SM00176 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046686 GO:GO:0005635
GO:GO:0007264 GO:GO:0005730 GO:GO:0003924 GO:GO:0006606
eggNOG:COG1100 EMBL:AF296836 HOGENOM:HOG000216664 KO:K07936
OMA:QIDMAMQ ProtClustDB:PLN03071 EMBL:X97380 EMBL:AF370337
EMBL:AY062997 EMBL:BT000424 EMBL:BT000659 EMBL:BT006264
EMBL:AK226813 EMBL:L16790 IPI:IPI00535542 RefSeq:NP_197502.1
UniGene:At.177 ProteinModelPortal:P41917 SMR:P41917 IntAct:P41917
STRING:P41917 EnsemblPlants:AT5G20020.1 GeneID:832124
KEGG:ath:AT5G20020 TAIR:At5g20020 InParanoid:P41917
PhylomeDB:P41917 Genevestigator:P41917 GermOnline:AT5G20020
Uniprot:P41917
Length = 221
Score = 941 (336.3 bits), Expect = 1.4e-94, P = 1.4e-94
Identities = 172/173 (99%), Positives = 173/173 (100%)
Query: 1 MALPSQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
MALP+QQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1 MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
Query: 61 KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61 KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 173
VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 173
>SGD|S000005711 [details] [associations]
symbol:GSP2 "GTP binding protein (mammalian Ranp homolog)"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA;IGI;ISS] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0006184 "GTP catabolic process" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0006913
"nucleocytoplasmic transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA;IGI;ISS] [GO:0006997 "nucleus organization"
evidence=IGI;ISS] [GO:0016021 "integral to membrane" evidence=ISM]
[GO:0006810 "transport" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001806 InterPro:IPR002041
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00627 PROSITE:PS51418
SMART:SM00176 SGD:S000005711 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0016021 GO:GO:0005634 GO:GO:0006886 GO:GO:0007264
EMBL:BK006948 GO:GO:0003924 GO:GO:0006913 eggNOG:COG1100
GO:GO:0006997 GeneTree:ENSGT00700000104457 HOGENOM:HOG000216664
KO:K07936 OrthoDB:EOG4JT3FH EMBL:L08691 EMBL:X71946 EMBL:Z75093
EMBL:AY693117 PIR:S35505 RefSeq:NP_014828.1
ProteinModelPortal:P32836 SMR:P32836 DIP:DIP-1357N IntAct:P32836
MINT:MINT-384600 STRING:P32836 PaxDb:P32836 PRIDE:P32836
EnsemblFungi:YOR185C GeneID:854357 KEGG:sce:YOR185C CYGD:YOR185c
OMA:PEVHIDI NextBio:976458 Genevestigator:P32836 GermOnline:YOR185C
Uniprot:P32836
Length = 220
Score = 782 (280.3 bits), Expect = 1.0e-77, P = 1.0e-77
Identities = 142/174 (81%), Positives = 158/174 (90%)
Query: 1 MALPSQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
M+ P+Q + P+FKLV+VGDGGTGKTTFVKRHLTGEFEKKY TIGVEVHPL F+TN G
Sbjct: 1 MSAPAQNNAEVPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFG 60
Query: 61 KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
+I+F WDTAGQEKFGGLRDGYYI+ QCAIIMFDVT+R+TYKNVP WHRDL RVCENIPI
Sbjct: 61 EIKFDVWDTAGQEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDLVRVCENIPI 120
Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGS 174
VLCGNKVDVK R+VKAK +TFHRKKNLQYY+ISAKSNYNFEKPFL+LARKLAG+
Sbjct: 121 VLCGNKVDVKERKVKAKTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLAGN 174
>SGD|S000004284 [details] [associations]
symbol:GSP1 "Ran GTPase" species:4932 "Saccharomyces
cerevisiae" [GO:0005737 "cytoplasm" evidence=TAS] [GO:0006913
"nucleocytoplasmic transport" evidence=IEA;TAS] [GO:0015031
"protein transport" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000467 "exonucleolytic trimming to generate
mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] [GO:0031938
"regulation of chromatin silencing at telomere" evidence=IMP]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA;IGI;ISS] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0006184 "GTP catabolic
process" evidence=IEA] [GO:0006997 "nucleus organization"
evidence=IGI;ISS] [GO:0016021 "integral to membrane" evidence=ISM]
InterPro:IPR001806 InterPro:IPR002041 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00627 PROSITE:PS51418 SMART:SM00176
SGD:S000004284 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0016021
GO:GO:0005634 GO:GO:0005737 GO:GO:0006886 GO:GO:0007264
GO:GO:0003924 GO:GO:0006913 EMBL:BK006945 EMBL:U17243 GO:GO:0006997
GO:GO:0031938 GO:GO:0000467 EMBL:X71945 EMBL:L08690 EMBL:AY558363
PIR:S35504 RefSeq:NP_013396.1 PDB:2X19 PDB:3ICQ PDB:3M1I
PDBsum:2X19 PDBsum:3ICQ PDBsum:3M1I ProteinModelPortal:P32835
SMR:P32835 DIP:DIP-747N IntAct:P32835 MINT:MINT-384649
STRING:P32835 TCDB:9.A.50.1.1 SWISS-2DPAGE:P32835
PeptideAtlas:P32835 PRIDE:P32835 EnsemblFungi:YLR293C GeneID:851000
KEGG:sce:YLR293C CYGD:YLR293c GeneTree:ENSGT00700000104457
HOGENOM:HOG000216664 KO:K07936 OMA:QIDMAMQ OrthoDB:EOG4JT3FH
EvolutionaryTrace:P32835 NextBio:967543 Genevestigator:P32835
GermOnline:YLR293C Uniprot:P32835
Length = 219
Score = 765 (274.4 bits), Expect = 6.3e-76, P = 6.3e-76
Identities = 141/174 (81%), Positives = 157/174 (90%)
Query: 1 MALPSQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
M+ P+ + P+FKLV+VGDGGTGKTTFVKRHLTGEFEKKY TIGVEVHPL F+TN G
Sbjct: 1 MSAPAANG-EVPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFG 59
Query: 61 KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
+I+F WDTAGQEKFGGLRDGYYI+ QCAIIMFDVT+R+TYKNVP WHRDL RVCENIPI
Sbjct: 60 EIKFDVWDTAGQEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDLVRVCENIPI 119
Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGS 174
VLCGNKVDVK R+VKAK +TFHRKKNLQYY+ISAKSNYNFEKPFL+LARKLAG+
Sbjct: 120 VLCGNKVDVKERKVKAKTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLAGN 173
>WB|WBGene00004302 [details] [associations]
symbol:ran-1 species:6239 "Caenorhabditis elegans"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0046785 "microtubule polymerization" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0048477 "oogenesis"
evidence=IMP] InterPro:IPR001806 InterPro:IPR002041
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00627 PROSITE:PS51418
SMART:SM00176 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005634
GO:GO:0009792 GO:GO:0040007 GO:GO:0006915 GO:GO:0006886
GO:GO:0007264 GO:GO:0051301 GO:GO:0007067 GO:GO:0007052
GO:GO:0002119 GO:GO:0003924 GO:GO:0040011 GO:GO:0048477
GO:GO:0006913 eggNOG:COG1100 GO:GO:0000777 GO:GO:0046785
EMBL:Z92803 GeneTree:ENSGT00700000104457 HOGENOM:HOG000216664
KO:K07936 PIR:T23195 RefSeq:NP_499369.1 ProteinModelPortal:O17915
SMR:O17915 DIP:DIP-25217N IntAct:O17915 MINT:MINT-1038463
STRING:O17915 PaxDb:O17915 PRIDE:O17915 EnsemblMetazoa:K01G5.4.1
EnsemblMetazoa:K01G5.4.2 GeneID:176503 KEGG:cel:CELE_K01G5.4
UCSC:K01G5.4.1 CTD:176503 WormBase:K01G5.4 InParanoid:O17915
OMA:ERVCENI NextBio:892852 ArrayExpress:O17915 Uniprot:O17915
Length = 215
Score = 761 (272.9 bits), Expect = 1.7e-75, P = 1.7e-75
Identities = 140/162 (86%), Positives = 150/162 (92%)
Query: 12 PSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAG 71
P+FKLV+VGDGGTGKTTFVKRHLTGEFEKKY T+GVEVHPL F TN G+IRF WDTAG
Sbjct: 8 PTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQIRFNVWDTAG 67
Query: 72 QEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKN 131
QEKFGGLRDGYYI GQCAIIMFDVTAR+TYKNVP WHRDL RVCENIPIVLCGNKVDVK+
Sbjct: 68 QEKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPNWHRDLARVCENIPIVLCGNKVDVKD 127
Query: 132 RQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 173
R+VKAK +TFHRKKNLQYY+ISAKSNYNFEKPFL+LARKL G
Sbjct: 128 RKVKAKTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLLG 169
>UNIPROTKB|O17915 [details] [associations]
symbol:ran-1 "GTP-binding nuclear protein ran-1"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001806 InterPro:IPR002041
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00627 PROSITE:PS51418
SMART:SM00176 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005634
GO:GO:0009792 GO:GO:0040007 GO:GO:0006915 GO:GO:0006886
GO:GO:0007264 GO:GO:0051301 GO:GO:0007067 GO:GO:0007052
GO:GO:0002119 GO:GO:0003924 GO:GO:0040011 GO:GO:0048477
GO:GO:0006913 eggNOG:COG1100 GO:GO:0000777 GO:GO:0046785
EMBL:Z92803 GeneTree:ENSGT00700000104457 HOGENOM:HOG000216664
KO:K07936 PIR:T23195 RefSeq:NP_499369.1 ProteinModelPortal:O17915
SMR:O17915 DIP:DIP-25217N IntAct:O17915 MINT:MINT-1038463
STRING:O17915 PaxDb:O17915 PRIDE:O17915 EnsemblMetazoa:K01G5.4.1
EnsemblMetazoa:K01G5.4.2 GeneID:176503 KEGG:cel:CELE_K01G5.4
UCSC:K01G5.4.1 CTD:176503 WormBase:K01G5.4 InParanoid:O17915
OMA:ERVCENI NextBio:892852 ArrayExpress:O17915 Uniprot:O17915
Length = 215
Score = 761 (272.9 bits), Expect = 1.7e-75, P = 1.7e-75
Identities = 140/162 (86%), Positives = 150/162 (92%)
Query: 12 PSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAG 71
P+FKLV+VGDGGTGKTTFVKRHLTGEFEKKY T+GVEVHPL F TN G+IRF WDTAG
Sbjct: 8 PTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQIRFNVWDTAG 67
Query: 72 QEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKN 131
QEKFGGLRDGYYI GQCAIIMFDVTAR+TYKNVP WHRDL RVCENIPIVLCGNKVDVK+
Sbjct: 68 QEKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPNWHRDLARVCENIPIVLCGNKVDVKD 127
Query: 132 RQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 173
R+VKAK +TFHRKKNLQYY+ISAKSNYNFEKPFL+LARKL G
Sbjct: 128 RKVKAKTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLLG 169
>CGD|CAL0005360 [details] [associations]
symbol:GSP1 species:5476 "Candida albicans" [GO:0005525 "GTP
binding" evidence=IDA] [GO:0003924 "GTPase activity"
evidence=IGI;ISS] [GO:0006913 "nucleocytoplasmic transport"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0006364 "rRNA processing" evidence=ISS] [GO:0051276 "chromosome
organization" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0006997 "nucleus
organization" evidence=IEA] [GO:0031938 "regulation of chromatin
silencing at telomere" evidence=IEA] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IEA] [GO:0000467 "exonucleolytic
trimming to generate mature 3'-end of 5.8S rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR001806 InterPro:IPR002041 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00627 PROSITE:PS51418 SMART:SM00176
CGD:CAL0005360 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0006886
GO:GO:0007264 GO:GO:0003924 GO:GO:0006913 GO:GO:0005622
GO:GO:0051726 GO:GO:0051276 GO:GO:0006364 HOGENOM:HOG000216664
KO:K07936 EMBL:AACQ01000196 EMBL:AACQ01000195 RefSeq:XP_711485.1
RefSeq:XP_711509.1 ProteinModelPortal:Q59P43 SMR:Q59P43
STRING:Q59P43 GeneID:3646894 GeneID:3646925 KEGG:cal:CaO19.12948
KEGG:cal:CaO19.5493 Uniprot:Q59P43
Length = 214
Score = 753 (270.1 bits), Expect = 1.2e-74, P = 1.2e-74
Identities = 136/165 (82%), Positives = 151/165 (91%)
Query: 10 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 69
+ P+FKLV+VGDGGTGKTTFVKRHLTGEFEKKY T+GVEVHPL F TN G+++F WDT
Sbjct: 4 EVPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLGFHTNFGELKFDVWDT 63
Query: 70 AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDV 129
AGQEKFGGLRDGYYI+GQC IIMFDVT+R+TYKNVP WHRDL RVCENIPIVLCGNKVDV
Sbjct: 64 AGQEKFGGLRDGYYINGQCGIIMFDVTSRITYKNVPNWHRDLVRVCENIPIVLCGNKVDV 123
Query: 130 KNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGS 174
K R+VKAK +TFHRKKNLQYY+ISAKSNYNFEKPFL+LARKL G+
Sbjct: 124 KERKVKAKTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGN 168
>UNIPROTKB|Q59P43 [details] [associations]
symbol:GSP1 "RAN-like GTP binding protein" species:237561
"Candida albicans SC5314" [GO:0003924 "GTPase activity"
evidence=IGI;ISS] [GO:0005525 "GTP binding" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=ISS] [GO:0006913
"nucleocytoplasmic transport" evidence=ISS] [GO:0051276 "chromosome
organization" evidence=IMP] [GO:0051726 "regulation of cell cycle"
evidence=ISS] InterPro:IPR001806 InterPro:IPR002041
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00627 PROSITE:PS51418
SMART:SM00176 CGD:CAL0005360 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0006886 GO:GO:0007264 GO:GO:0003924 GO:GO:0006913
GO:GO:0005622 GO:GO:0051726 GO:GO:0051276 GO:GO:0006364
HOGENOM:HOG000216664 KO:K07936 EMBL:AACQ01000196 EMBL:AACQ01000195
RefSeq:XP_711485.1 RefSeq:XP_711509.1 ProteinModelPortal:Q59P43
SMR:Q59P43 STRING:Q59P43 GeneID:3646894 GeneID:3646925
KEGG:cal:CaO19.12948 KEGG:cal:CaO19.5493 Uniprot:Q59P43
Length = 214
Score = 753 (270.1 bits), Expect = 1.2e-74, P = 1.2e-74
Identities = 136/165 (82%), Positives = 151/165 (91%)
Query: 10 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 69
+ P+FKLV+VGDGGTGKTTFVKRHLTGEFEKKY T+GVEVHPL F TN G+++F WDT
Sbjct: 4 EVPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLGFHTNFGELKFDVWDT 63
Query: 70 AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDV 129
AGQEKFGGLRDGYYI+GQC IIMFDVT+R+TYKNVP WHRDL RVCENIPIVLCGNKVDV
Sbjct: 64 AGQEKFGGLRDGYYINGQCGIIMFDVTSRITYKNVPNWHRDLVRVCENIPIVLCGNKVDV 123
Query: 130 KNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGS 174
K R+VKAK +TFHRKKNLQYY+ISAKSNYNFEKPFL+LARKL G+
Sbjct: 124 KERKVKAKTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGN 168
>FB|FBgn0020255 [details] [associations]
symbol:Ran "Ran" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=IDA] [GO:0005525 "GTP binding" evidence=IDA]
[GO:0005880 "nuclear microtubule" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0008360 "regulation of cell shape" evidence=IMP]
[GO:0007155 "cell adhesion" evidence=IMP] [GO:0007015 "actin
filament organization" evidence=IMP] [GO:0006913 "nucleocytoplasmic
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0000212 "meiotic spindle organization" evidence=IMP]
[GO:0072686 "mitotic spindle" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001806 InterPro:IPR002041
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00627 PROSITE:PS51418
SMART:SM00176 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005875
GO:GO:0006886 GO:GO:0007264 GO:GO:0051301 GO:GO:0007067
GO:GO:0007015 GO:GO:0008360 GO:GO:0005811 EMBL:AE014298
GO:GO:0003924 GO:GO:0007155 GO:GO:0006913 eggNOG:COG1100
GO:GO:0005880 GO:GO:0072686 GO:GO:0000212
GeneTree:ENSGT00700000104457 KO:K07936 CTD:5901 OMA:ERVCENI
EMBL:AF233584 EMBL:AF220950 EMBL:AY061398 EMBL:AY070533
EMBL:BT003574 EMBL:AF233585 RefSeq:NP_651969.1 RefSeq:NP_727499.1
UniGene:Dm.6755 ProteinModelPortal:Q9VZ23 SMR:Q9VZ23 IntAct:Q9VZ23
MINT:MINT-943398 STRING:Q9VZ23 PaxDb:Q9VZ23 PRIDE:Q9VZ23
EnsemblMetazoa:FBtr0073471 EnsemblMetazoa:FBtr0073472 GeneID:44072
KEGG:dme:Dmel_CG1404 UCSC:CG1404-RA FlyBase:FBgn0020255
InParanoid:Q9VZ23 OrthoDB:EOG4GF1X5 PhylomeDB:Q9VZ23 ChiTaRS:RAN
GenomeRNAi:44072 NextBio:836708 Bgee:Q9VZ23 GermOnline:CG1404
Uniprot:Q9VZ23
Length = 216
Score = 752 (269.8 bits), Expect = 1.5e-74, P = 1.5e-74
Identities = 136/169 (80%), Positives = 151/169 (89%)
Query: 5 SQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRF 64
+Q+ D P+FK V+VGDGGTGKTTFVKRH+TGEFEKKY T+GVEVHPL F TN G IRF
Sbjct: 2 AQEGQDIPTFKCVLVGDGGTGKTTFVKRHMTGEFEKKYVATLGVEVHPLIFHTNRGAIRF 61
Query: 65 YCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCG 124
WDTAGQEKFGGLRDGYYI GQCA+IMFDVT+R+TYKNVP WHRDL RVCENIPIVLCG
Sbjct: 62 NVWDTAGQEKFGGLRDGYYIQGQCAVIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCG 121
Query: 125 NKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 173
NKVD+K+R+VKAK + FHRKKNLQYY+ISAKSNYNFEKPFL+LARKL G
Sbjct: 122 NKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVG 170
>ASPGD|ASPL0000033427 [details] [associations]
symbol:ran species:162425 "Emericella nidulans"
[GO:0005622 "intracellular" evidence=IDA] [GO:0006913
"nucleocytoplasmic transport" evidence=IEA] [GO:0006184 "GTP
catabolic process" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IDA] [GO:0006997
"nucleus organization" evidence=IEA] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] InterPro:IPR001806 InterPro:IPR002041
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00627 PROSITE:PS51418
SMART:SM00176 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0006886
GO:GO:0007264 GO:GO:0003924 GO:GO:0006913 GO:GO:0005622
EMBL:BN001305 OMA:ERVCENI ProteinModelPortal:C8VGD6 SMR:C8VGD6
EnsemblFungi:CADANIAT00003606 Uniprot:C8VGD6
Length = 215
Score = 749 (268.7 bits), Expect = 3.1e-74, P = 3.1e-74
Identities = 136/163 (83%), Positives = 149/163 (91%)
Query: 12 PSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAG 71
P+FKLV+VGDGGTGKTTFVKRHLTGEFEKKY T+GVEVHP+ F TN G I+F WDTAG
Sbjct: 7 PTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPIKFTTNLGTIQFDVWDTAG 66
Query: 72 QEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKN 131
QEKFGGLRDGYYI+GQC IIMFDVT+R+TYKNVP WHRDL RVCENIPIVLCGNKVDVK
Sbjct: 67 QEKFGGLRDGYYINGQCGIIMFDVTSRITYKNVPNWHRDLVRVCENIPIVLCGNKVDVKE 126
Query: 132 RQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGS 174
R+VKAK +TFHRKKNLQYY+ISAKSNYNFEKPFL+LARKL G+
Sbjct: 127 RKVKAKTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGN 169
>TAIR|locus:2161685 [details] [associations]
symbol:RAN4 "ras-related nuclear protein 4" species:3702
"Arabidopsis thaliana" [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006184 "GTP catabolic process" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006913 "nucleocytoplasmic transport" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR002041 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00627
PROSITE:PS51418 SMART:SM00176 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006886
GO:GO:0007264 GO:GO:0003924 GO:GO:0006913 eggNOG:COG1100
EMBL:AB010071 HOGENOM:HOG000216664 KO:K07936 ProtClustDB:PLN03071
IPI:IPI00540839 RefSeq:NP_200319.1 UniGene:At.55559 HSSP:Q9CZA2
ProteinModelPortal:Q9FLQ3 SMR:Q9FLQ3 PaxDb:Q9FLQ3 PRIDE:Q9FLQ3
EnsemblPlants:AT5G55080.1 GeneID:835599 KEGG:ath:AT5G55080
TAIR:At5g55080 InParanoid:Q9FLQ3 OMA:RRVCKNI PhylomeDB:Q9FLQ3
Genevestigator:Q9FLQ3 Uniprot:Q9FLQ3
Length = 222
Score = 740 (265.6 bits), Expect = 2.8e-73, P = 2.8e-73
Identities = 133/173 (76%), Positives = 154/173 (89%)
Query: 1 MALPSQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
MALP+QQ VD P+FKL+IVGDGGTGKTTF+KRHLTGEFE EPT+GV+++PLDFFTN G
Sbjct: 1 MALPNQQNVDLPTFKLLIVGDGGTGKTTFLKRHLTGEFEHNTEPTLGVDIYPLDFFTNRG 60
Query: 61 KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
KIRF CWDTAGQEK+ GL+D YYIHGQCAIIMFDVTAR TY N+ W+RDL RVC+NIPI
Sbjct: 61 KIRFECWDTAGQEKYSGLKDAYYIHGQCAIIMFDVTARHTYMNIDRWYRDLRRVCKNIPI 120
Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 173
VLCGNKVDV +RQ+K K V++HRKK LQYYE+SAK+N NFEKPFLYLAR++AG
Sbjct: 121 VLCGNKVDVPSRQIKPKHVSYHRKKCLQYYEMSAKNNCNFEKPFLYLARRIAG 173
>UNIPROTKB|F1NEV9 [details] [associations]
symbol:RAN "GTP-binding nuclear protein Ran" species:9031
"Gallus gallus" [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006913 "nucleocytoplasmic transport" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0000785 "chromatin"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0032092
"positive regulation of protein binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR002041 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00627 PROSITE:PS51418 SMART:SM00176
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0006886 GO:GO:0007264
GO:GO:0032092 GO:GO:0003924 GO:GO:0006913 GO:GO:0000785
GeneTree:ENSGT00700000104457 OMA:ERVCENI EMBL:AADN02034836
EMBL:AADN02034837 IPI:IPI00821486 Ensembl:ENSGALT00000039717
ArrayExpress:F1NEV9 Uniprot:F1NEV9
Length = 218
Score = 734 (263.4 bits), Expect = 1.2e-72, P = 1.2e-72
Identities = 137/172 (79%), Positives = 148/172 (86%)
Query: 4 PSQQTVDYPS--FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 61
PS P FKLV+VGDGGTGKTTFVKRHLTGEFEKKY T+GVEVHPL F TN G
Sbjct: 1 PSMAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGP 60
Query: 62 IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121
I+F WDTAGQEKFGGLRDGYYI QCAIIMFDVT+R+TYKNVP WHRDL RVCENIPIV
Sbjct: 61 IKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIV 120
Query: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 173
LCGNKVD+K+R+VKAK + FHRKKNLQYY+ISAKSNYNFEKPFL+LARKL G
Sbjct: 121 LCGNKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIG 172
>UNIPROTKB|P42558 [details] [associations]
symbol:RAN "GTP-binding nuclear protein Ran" species:9031
"Gallus gallus" [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006913 "nucleocytoplasmic transport" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001806 InterPro:IPR002041
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00627 PROSITE:PS51418
SMART:SM00176 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005634
GO:GO:0006886 GO:GO:0007264 GO:GO:0032092 GO:GO:0003924
GO:GO:0006913 GO:GO:0000785 eggNOG:COG1100
GeneTree:ENSGT00700000104457 HOGENOM:HOG000216664 KO:K07936
HOVERGEN:HBG107376 OrthoDB:EOG4640CV CTD:5901 EMBL:X66906
IPI:IPI00582263 PIR:S24031 RefSeq:NP_990589.1 UniGene:Gga.4068
ProteinModelPortal:P42558 SMR:P42558 STRING:P42558 PRIDE:P42558
Ensembl:ENSGALT00000004055 GeneID:396193 KEGG:gga:396193
InParanoid:P42558 NextBio:20816245 ArrayExpress:P42558
Uniprot:P42558
Length = 216
Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
Identities = 134/160 (83%), Positives = 145/160 (90%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV+VGDGGTGKTTFVKRHLTGEFEKKY T+GVEVHPL F TN G I+F WDTAGQE
Sbjct: 11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQE 70
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQ 133
KFGGLRDGYYI QCAIIMFDVT+R+TYKNVP WHRDL RVCENIPIVLCGNKVD+K+R+
Sbjct: 71 KFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRK 130
Query: 134 VKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 173
VKAK + FHRKKNLQYY+ISAKSNYNFEKPFL+LARKL G
Sbjct: 131 VKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIG 170
>UNIPROTKB|Q3T054 [details] [associations]
symbol:RAN "GTP-binding nuclear protein Ran" species:9913
"Bos taurus" [GO:0042470 "melanosome" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006913 "nucleocytoplasmic
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] InterPro:IPR001806 InterPro:IPR002041
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00627 PROSITE:PS51418
SMART:SM00176 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005634
GO:GO:0042470 GO:GO:0006886 GO:GO:0007264 GO:GO:0051301
GO:GO:0007067 GO:GO:0003924 GO:GO:0006913 eggNOG:COG1100
HOGENOM:HOG000216664 KO:K07936 HSSP:Q9CZA2 HOVERGEN:HBG107376
OrthoDB:EOG4640CV EMBL:BC102559 IPI:IPI00705941
RefSeq:NP_001029877.1 UniGene:Bt.64943 ProteinModelPortal:Q3T054
SMR:Q3T054 STRING:Q3T054 PRIDE:Q3T054 GeneID:540457 KEGG:bta:540457
CTD:5901 InParanoid:Q3T054 NextBio:20878651 Uniprot:Q3T054
Length = 216
Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
Identities = 134/160 (83%), Positives = 145/160 (90%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV+VGDGGTGKTTFVKRHLTGEFEKKY T+GVEVHPL F TN G I+F WDTAGQE
Sbjct: 11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQE 70
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQ 133
KFGGLRDGYYI QCAIIMFDVT+R+TYKNVP WHRDL RVCENIPIVLCGNKVD+K+R+
Sbjct: 71 KFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRK 130
Query: 134 VKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 173
VKAK + FHRKKNLQYY+ISAKSNYNFEKPFL+LARKL G
Sbjct: 131 VKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIG 170
>UNIPROTKB|P62825 [details] [associations]
symbol:RAN "GTP-binding nuclear protein Ran" species:9615
"Canis lupus familiaris" [GO:0042470 "melanosome" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006913 "nucleocytoplasmic
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] InterPro:IPR001806 InterPro:IPR002041
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00627 PROSITE:PS51418
SMART:SM00176 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005634
GO:GO:0042470 GO:GO:0006886 GO:GO:0007264 GO:GO:0051301
GO:GO:0007067 GO:GO:0003924 GO:GO:0006913 eggNOG:COG1100 PDB:1WA5
PDBsum:1WA5 KO:K07936 PDB:2BKU PDBsum:2BKU PDB:1A2K PDBsum:1A2K
HOVERGEN:HBG107376 OrthoDB:EOG4640CV EMBL:Z11922 PIR:JC1455
RefSeq:NP_001181913.1 UniGene:Cfa.50 PDB:1BYU PDB:1QG2 PDB:1QG4
PDB:3A6P PDB:3RAN PDBsum:1BYU PDBsum:1QG2 PDBsum:1QG4 PDBsum:3A6P
PDBsum:3RAN ProteinModelPortal:P62825 SMR:P62825 IntAct:P62825
STRING:P62825 PRIDE:P62825 GeneID:100499482 KEGG:cfa:100499482
InParanoid:P62825 EvolutionaryTrace:P62825 NextBio:20831647
Uniprot:P62825
Length = 216
Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
Identities = 134/160 (83%), Positives = 145/160 (90%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV+VGDGGTGKTTFVKRHLTGEFEKKY T+GVEVHPL F TN G I+F WDTAGQE
Sbjct: 11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQE 70
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQ 133
KFGGLRDGYYI QCAIIMFDVT+R+TYKNVP WHRDL RVCENIPIVLCGNKVD+K+R+
Sbjct: 71 KFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRK 130
Query: 134 VKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 173
VKAK + FHRKKNLQYY+ISAKSNYNFEKPFL+LARKL G
Sbjct: 131 VKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIG 170
>UNIPROTKB|P62826 [details] [associations]
symbol:RAN "GTP-binding nuclear protein Ran" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0042470
"melanosome" evidence=IEA] [GO:0000785 "chromatin" evidence=IDA]
[GO:0003924 "GTPase activity" evidence=TAS] [GO:0005643 "nuclear
pore" evidence=NAS] [GO:0006259 "DNA metabolic process"
evidence=TAS] [GO:0006405 "RNA export from nucleus" evidence=NAS]
[GO:0006611 "protein export from nucleus" evidence=IDA;NAS]
[GO:0007052 "mitotic spindle organization" evidence=TAS]
[GO:0007067 "mitosis" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0003713 "transcription coactivator
activity" evidence=NAS] [GO:0030521 "androgen receptor signaling
pathway" evidence=NAS] [GO:0050681 "androgen receptor binding"
evidence=NAS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0003682 "chromatin binding"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005525
"GTP binding" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0019058 "viral
infectious cycle" evidence=TAS] [GO:0032092 "positive regulation of
protein binding" evidence=IDA] Reactome:REACT_71
Reactome:REACT_111217 InterPro:IPR001806 InterPro:IPR002041
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00627 PROSITE:PS51418
SMART:SM00176 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0042470 Pathway_Interaction_DB:foxopathway
Pathway_Interaction_DB:nfat_3pathway
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_116125
GO:GO:0010467 GO:GO:0019048 GO:GO:0045893 GO:GO:0007264
GO:GO:0005654 GO:GO:0030521 Pathway_Interaction_DB:aurora_a_pathway
Pathway_Interaction_DB:wnt_canonical_pathway GO:GO:0051301
GO:GO:0007067 GO:GO:0007052 GO:GO:0032092 GO:GO:0006259
GO:GO:0003924 GO:GO:0005643 EMBL:CH471054 GO:GO:0003682
GO:GO:0003713 GO:GO:0019058 GO:GO:0050681
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0006611
eggNOG:COG1100 Pathway_Interaction_DB:nfkappabcanonicalpathway
KO:K07936 Pathway_Interaction_DB:ranbp2pathway PDB:1IBR PDBsum:1IBR
PDB:3EA5 PDBsum:3EA5 GO:GO:0006405 PDB:3CH5 PDB:3GJ3 PDB:3GJ4
PDB:3GJ5 PDB:3GJ6 PDB:3GJ7 PDB:3GJ8 PDBsum:3CH5 PDBsum:3GJ3
PDBsum:3GJ4 PDBsum:3GJ5 PDBsum:3GJ6 PDBsum:3GJ7 PDBsum:3GJ8
PDB:1K5D PDB:1K5G PDBsum:1K5D PDBsum:1K5G HOVERGEN:HBG107376
OrthoDB:EOG4640CV CTD:5901 ChiTaRS:RAN EMBL:M31469 EMBL:AF052578
EMBL:AF054183 EMBL:AF501887 EMBL:BT007271 EMBL:CR450347
EMBL:AK290763 EMBL:AK312466 EMBL:BC004272 EMBL:BC014518
EMBL:BC014901 EMBL:BC016654 EMBL:BC051908 EMBL:BC072000
EMBL:AB062399 IPI:IPI00643041 PIR:A44393 RefSeq:NP_006316.1
UniGene:Hs.10842 PDB:1I2M PDB:1QBK PDB:1RRP PDB:3GJ0 PDB:3GJX
PDB:3NBY PDB:3NBZ PDB:3NC0 PDB:3NC1 PDB:4GMX PDB:4GPT PDB:4HAT
PDB:4HAU PDB:4HAV PDB:4HAW PDB:4HAX PDB:4HAY PDB:4HAZ PDB:4HB0
PDB:4HB2 PDB:4HB3 PDB:4HB4 PDBsum:1I2M PDBsum:1QBK PDBsum:1RRP
PDBsum:3GJ0 PDBsum:3GJX PDBsum:3NBY PDBsum:3NBZ PDBsum:3NC0
PDBsum:3NC1 PDBsum:4GMX PDBsum:4GPT PDBsum:4HAT PDBsum:4HAU
PDBsum:4HAV PDBsum:4HAW PDBsum:4HAX PDBsum:4HAY PDBsum:4HAZ
PDBsum:4HB0 PDBsum:4HB2 PDBsum:4HB3 PDBsum:4HB4
ProteinModelPortal:P62826 SMR:P62826 DIP:DIP-5929N IntAct:P62826
MINT:MINT-94188 STRING:P62826 PhosphoSite:P62826 DMDM:51338598
OGP:P62826 REPRODUCTION-2DPAGE:P62826 UCD-2DPAGE:P62826
PaxDb:P62826 PRIDE:P62826 DNASU:5901 Ensembl:ENST00000392369
Ensembl:ENST00000543796 GeneID:5901 KEGG:hsa:5901 UCSC:uc001uir.3
GeneCards:GC12P131356 HGNC:HGNC:9846 MIM:601179 neXtProt:NX_P62826
PharmGKB:PA34205 InParanoid:P62826 ChEMBL:CHEMBL1741190
EvolutionaryTrace:P62826 GenomeRNAi:5901 NextBio:22956
ArrayExpress:P62826 Bgee:P62826 Genevestigator:P62826
GermOnline:ENSG00000132341 Uniprot:P62826
Length = 216
Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
Identities = 134/160 (83%), Positives = 145/160 (90%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV+VGDGGTGKTTFVKRHLTGEFEKKY T+GVEVHPL F TN G I+F WDTAGQE
Sbjct: 11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQE 70
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQ 133
KFGGLRDGYYI QCAIIMFDVT+R+TYKNVP WHRDL RVCENIPIVLCGNKVD+K+R+
Sbjct: 71 KFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRK 130
Query: 134 VKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 173
VKAK + FHRKKNLQYY+ISAKSNYNFEKPFL+LARKL G
Sbjct: 131 VKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIG 170
>UNIPROTKB|F1RFQ7 [details] [associations]
symbol:RAN "GTP-binding nuclear protein Ran" species:9823
"Sus scrofa" [GO:0032092 "positive regulation of protein binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000785
"chromatin" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
InterPro:IPR001806 InterPro:IPR002041 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00627 PROSITE:PS51418 SMART:SM00176
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0006886 GO:GO:0007264
GO:GO:0032092 GO:GO:0003924 GO:GO:0006913 GO:GO:0000785
GeneTree:ENSGT00700000104457 KO:K07936 CTD:5901 OMA:ERVCENI
EMBL:CU468532 EMBL:GACC01000045 RefSeq:XP_001925468.1
UniGene:Ssc.51883 SMR:F1RFQ7 Ensembl:ENSSSCT00000010685
GeneID:397655 KEGG:ssc:397655 Uniprot:F1RFQ7
Length = 216
Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
Identities = 134/160 (83%), Positives = 145/160 (90%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV+VGDGGTGKTTFVKRHLTGEFEKKY T+GVEVHPL F TN G I+F WDTAGQE
Sbjct: 11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQE 70
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQ 133
KFGGLRDGYYI QCAIIMFDVT+R+TYKNVP WHRDL RVCENIPIVLCGNKVD+K+R+
Sbjct: 71 KFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRK 130
Query: 134 VKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 173
VKAK + FHRKKNLQYY+ISAKSNYNFEKPFL+LARKL G
Sbjct: 131 VKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIG 170
>UNIPROTKB|P52301 [details] [associations]
symbol:ran "GTP-binding nuclear protein Ran" species:8355
"Xenopus laevis" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001806 InterPro:IPR002041 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00627 PROSITE:PS51418 SMART:SM00176
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005634 GO:GO:0006886
GO:GO:0007264 GO:GO:0003924 GO:GO:0006913 KO:K07936
HOVERGEN:HBG107376 CTD:5901 CTD:176503 EMBL:AB030945 EMBL:BC041293
RefSeq:NP_001080182.1 RefSeq:NP_001128547.1 UniGene:Xl.55052
UniGene:Xl.57143 ProteinModelPortal:P52301 SMR:P52301
GeneID:100189578 GeneID:379874 KEGG:xla:100189578 KEGG:xla:379874
Xenbase:XB-GENE-865870 Uniprot:P52301
Length = 216
Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
Identities = 134/160 (83%), Positives = 145/160 (90%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV+VGDGGTGKTTFVKRHLTGEFEKKY T+GVEVHPL F TN G I+F WDTAGQE
Sbjct: 11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQE 70
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQ 133
KFGGLRDGYYI QCAIIMFDVT+R+TYKNVP WHRDL RVCENIPIVLCGNKVD+K+R+
Sbjct: 71 KFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRK 130
Query: 134 VKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 173
VKAK + FHRKKNLQYY+ISAKSNYNFEKPFL+LARKL G
Sbjct: 131 VKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIG 170
>MGI|MGI:1333112 [details] [associations]
symbol:Ran "RAN, member RAS oncogene family" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005525 "GTP binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006184 "GTP catabolic process" evidence=IEA]
[GO:0006606 "protein import into nucleus" evidence=IDA] [GO:0006611
"protein export from nucleus" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0019003 "GDP binding" evidence=ISO] [GO:0019904
"protein domain specific binding" evidence=ISO] [GO:0030036 "actin
cytoskeleton organization" evidence=IMP] [GO:0032092 "positive
regulation of protein binding" evidence=ISO] [GO:0034613 "cellular
protein localization" evidence=IMP] [GO:0034629 "cellular protein
complex localization" evidence=IMP] [GO:0043234 "protein complex"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR001806 InterPro:IPR002041 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00627 PROSITE:PS51418 SMART:SM00176
MGI:MGI:1333112 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005634
GO:GO:0005737 GO:GO:0042470 GO:GO:0007264 GO:GO:0051301
GO:GO:0007067 GO:GO:0030036 GO:GO:0003924 GO:GO:0006606
eggNOG:COG1100 GeneTree:ENSGT00700000104457 KO:K07936 GO:GO:0034629
HOVERGEN:HBG107376 OrthoDB:EOG4640CV CTD:5901 OMA:ERVCENI
EMBL:L32751 EMBL:S83456 EMBL:AF159256 EMBL:AK010569 EMBL:AK010672
EMBL:AK012268 EMBL:AK012844 EMBL:AK075900 EMBL:AK087974
EMBL:AK151341 EMBL:AK151937 EMBL:AK153197 EMBL:AK153411
EMBL:AK160647 EMBL:AK167040 EMBL:AK168183 EMBL:BC014829
EMBL:BC083356 EMBL:M79316 IPI:IPI00134621 PIR:I57020 PIR:JH0654
RefSeq:NP_033417.1 RefSeq:XP_001475472.1 UniGene:Mm.297440
UniGene:Mm.386831 ProteinModelPortal:P62827 SMR:P62827
IntAct:P62827 STRING:P62827 PhosphoSite:P62827
REPRODUCTION-2DPAGE:P62827 PaxDb:P62827 PRIDE:P62827
Ensembl:ENSMUST00000031383 Ensembl:ENSMUST00000111343
GeneID:100045999 GeneID:19384 KEGG:mmu:100045999 KEGG:mmu:19384
UCSC:uc008shc.1 InParanoid:P62827 NextBio:459449 Bgee:P62827
CleanEx:MM_RAN Genevestigator:P62827 GermOnline:ENSMUSG00000029430
Uniprot:P62827
Length = 216
Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
Identities = 134/160 (83%), Positives = 145/160 (90%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV+VGDGGTGKTTFVKRHLTGEFEKKY T+GVEVHPL F TN G I+F WDTAGQE
Sbjct: 11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQE 70
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQ 133
KFGGLRDGYYI QCAIIMFDVT+R+TYKNVP WHRDL RVCENIPIVLCGNKVD+K+R+
Sbjct: 71 KFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRK 130
Query: 134 VKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 173
VKAK + FHRKKNLQYY+ISAKSNYNFEKPFL+LARKL G
Sbjct: 131 VKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIG 170
>POMBASE|SPBC1289.03c [details] [associations]
symbol:spi1 "Ran GTPase Spi1" species:4896
"Schizosaccharomyces pombe" [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005525 "GTP binding" evidence=ISM] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006184 "GTP
catabolic process" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0031291 "Ran protein signal transduction"
evidence=NAS] InterPro:IPR001806 InterPro:IPR002041
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00627 PROSITE:PS51418
SMART:SM00176 PomBase:SPBC1289.03c GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005829 GO:GO:0005634 GO:GO:0007346 GO:GO:0006886
EMBL:CU329671 GO:GO:0003924 GO:GO:0006913 GenomeReviews:CU329671_GR
eggNOG:COG1100 HOGENOM:HOG000216664 KO:K07936 OrthoDB:EOG4JT3FH
GO:GO:0031291 OMA:ERVCENI EMBL:M73527 PIR:A40039 RefSeq:NP_596827.1
ProteinModelPortal:P28748 SMR:P28748 STRING:P28748 PRIDE:P28748
EnsemblFungi:SPBC1289.03c.1 GeneID:2540149 KEGG:spo:SPBC1289.03c
NextBio:20801285 Uniprot:P28748
Length = 216
Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
Identities = 136/168 (80%), Positives = 148/168 (88%)
Query: 7 QTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYC 66
Q + P+FKLV+VGDGGTGKTTFVKRHLTGEFEKKY T+GVEVHPL F TN G+I F
Sbjct: 3 QPQNVPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNV 62
Query: 67 WDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNK 126
WDTAGQEK GGLRDGYYI GQC IIMFDVT+R+TYKNVP W RDL RVCENIPIVLCGNK
Sbjct: 63 WDTAGQEKLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDLVRVCENIPIVLCGNK 122
Query: 127 VDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGS 174
VDVK R+VKAK +TFHRKKNLQYY+ISAKSNYNFEKPFL+LARKL G+
Sbjct: 123 VDVKERKVKAKAITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGN 170
>RGD|620367 [details] [associations]
symbol:Ran "RAN, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0000226 "microtubule cytoskeleton
organization" evidence=TAS] [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0005525 "GTP binding" evidence=ISO;IDA]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006606 "protein import into nucleus"
evidence=ISO;TAS] [GO:0006611 "protein export from nucleus"
evidence=ISO;TAS] [GO:0006913 "nucleocytoplasmic transport"
evidence=TAS] [GO:0007286 "spermatid development" evidence=IEP]
[GO:0019003 "GDP binding" evidence=IDA] [GO:0019904 "protein domain
specific binding" evidence=IPI] [GO:0030036 "actin cytoskeleton
organization" evidence=ISO] [GO:0032092 "positive regulation of
protein binding" evidence=ISO] [GO:0034613 "cellular protein
localization" evidence=ISO] [GO:0034629 "cellular protein complex
localization" evidence=ISO] [GO:0043234 "protein complex"
evidence=IDA] [GO:0000785 "chromatin" evidence=ISO]
InterPro:IPR001806 InterPro:IPR002041 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00627 PROSITE:PS51418 SMART:SM00176
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005634 GO:GO:0042470
GO:GO:0006886 GO:GO:0007264 GO:GO:0051301 GO:GO:0007067
GO:GO:0003924 GO:GO:0006913 eggNOG:COG1100 PDB:1WA5 PDBsum:1WA5
KO:K07936 PDB:2BKU PDBsum:2BKU PDB:1A2K PDBsum:1A2K
HOVERGEN:HBG107376 OrthoDB:EOG4640CV EMBL:Z11922 PIR:JC1455
RefSeq:NP_001181913.1 UniGene:Cfa.50 PDB:1BYU PDB:1QG2 PDB:1QG4
PDB:3A6P PDB:3RAN PDBsum:1BYU PDBsum:1QG2 PDBsum:1QG4 PDBsum:3A6P
PDBsum:3RAN ProteinModelPortal:P62825 SMR:P62825 IntAct:P62825
STRING:P62825 PRIDE:P62825 GeneID:100499482 KEGG:cfa:100499482
InParanoid:P62825 EvolutionaryTrace:P62825 NextBio:20831647
Uniprot:P62825
Length = 216
Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
Identities = 134/160 (83%), Positives = 145/160 (90%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV+VGDGGTGKTTFVKRHLTGEFEKKY T+GVEVHPL F TN G I+F WDTAGQE
Sbjct: 11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQE 70
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQ 133
KFGGLRDGYYI QCAIIMFDVT+R+TYKNVP WHRDL RVCENIPIVLCGNKVD+K+R+
Sbjct: 71 KFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRK 130
Query: 134 VKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 173
VKAK + FHRKKNLQYY+ISAKSNYNFEKPFL+LARKL G
Sbjct: 131 VKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIG 170
>UNIPROTKB|P62828 [details] [associations]
symbol:Ran "GTP-binding nuclear protein Ran" species:10116
"Rattus norvegicus" [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0042470 "melanosome" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR001806 InterPro:IPR002041
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00627 PROSITE:PS51418
SMART:SM00176 RGD:620367 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005634 GO:GO:0042470 GO:GO:0006886 GO:GO:0007264
GO:GO:0051301 GO:GO:0007067 GO:GO:0003924 GO:GO:0006913
eggNOG:COG1100 GeneTree:ENSGT00700000104457 KO:K07936
HOVERGEN:HBG107376 OrthoDB:EOG4640CV CTD:5901 OMA:ERVCENI
EMBL:AF306457 EMBL:BC059123 IPI:IPI00212796 RefSeq:NP_445891.1
UniGene:Rn.107698 ProteinModelPortal:P62828 SMR:P62828
IntAct:P62828 STRING:P62828 PhosphoSite:P62828
World-2DPAGE:0004:P62828 PRIDE:P62828 Ensembl:ENSRNOT00000001247
GeneID:84509 KEGG:rno:84509 InParanoid:P62828 NextBio:617085
Genevestigator:P62828 GermOnline:ENSRNOG00000000938 Uniprot:P62828
Length = 216
Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
Identities = 134/160 (83%), Positives = 145/160 (90%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV+VGDGGTGKTTFVKRHLTGEFEKKY T+GVEVHPL F TN G I+F WDTAGQE
Sbjct: 11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQE 70
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQ 133
KFGGLRDGYYI QCAIIMFDVT+R+TYKNVP WHRDL RVCENIPIVLCGNKVD+K+R+
Sbjct: 71 KFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRK 130
Query: 134 VKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 173
VKAK + FHRKKNLQYY+ISAKSNYNFEKPFL+LARKL G
Sbjct: 131 VKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIG 170
>ZFIN|ZDB-GENE-990415-88 [details] [associations]
symbol:ran "ras-related nuclear protein"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001806 InterPro:IPR002041 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00627 PROSITE:PS51418 SMART:SM00176
ZFIN:ZDB-GENE-990415-88 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005634 GO:GO:0006886 GO:GO:0007264 GO:GO:0003924
GO:GO:0006913 eggNOG:COG1100 GeneTree:ENSGT00700000104457
HOGENOM:HOG000216664 KO:K07936 HOVERGEN:HBG107376 OrthoDB:EOG4640CV
CTD:5901 OMA:ERVCENI EMBL:U61395 EMBL:BC050517 IPI:IPI00505092
RefSeq:NP_571384.1 UniGene:Dr.32354 ProteinModelPortal:P79735
SMR:P79735 PRIDE:P79735 Ensembl:ENSDART00000034438
Ensembl:ENSDART00000128717 Ensembl:ENSDART00000144503 GeneID:30572
KEGG:dre:30572 InParanoid:P79735 NextBio:20806942 Bgee:P79735
Uniprot:P79735
Length = 215
Score = 730 (262.0 bits), Expect = 3.2e-72, P = 3.2e-72
Identities = 133/160 (83%), Positives = 145/160 (90%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV+VGDGGTGKTTFVKRHLTGEFEKKY T+GVEVHPL F TN G I++ WDTAGQE
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGAIKYNVWDTAGQE 69
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQ 133
KFGGLRDGYYI QCAIIMFDVT+R+TYKNVP WHRDL RVCENIPIVLCGNKVD+K+R+
Sbjct: 70 KFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRK 129
Query: 134 VKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 173
VKAK + FHRKKNLQYY+ISAKSNYNFEKPFL+LARKL G
Sbjct: 130 VKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIG 169
>UNIPROTKB|J3KQE5 [details] [associations]
symbol:RAN "GTP-binding nuclear protein Ran" species:9606
"Homo sapiens" [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006913 "nucleocytoplasmic transport" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR002041 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00627
PROSITE:PS51418 SMART:SM00176 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0006886 GO:GO:0007264 GO:GO:0003924 GO:GO:0006913
GO:GO:0005622 ChiTaRS:RAN HGNC:HGNC:9846 EMBL:AC073912
ProteinModelPortal:J3KQE5 Ensembl:ENST00000448750 Uniprot:J3KQE5
Length = 234
Score = 728 (261.3 bits), Expect = 5.3e-72, P = 5.3e-72
Identities = 133/160 (83%), Positives = 145/160 (90%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
+KLV+VGDGGTGKTTFVKRHLTGEFEKKY T+GVEVHPL F TN G I+F WDTAGQE
Sbjct: 29 WKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQE 88
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQ 133
KFGGLRDGYYI QCAIIMFDVT+R+TYKNVP WHRDL RVCENIPIVLCGNKVD+K+R+
Sbjct: 89 KFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRK 148
Query: 134 VKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 173
VKAK + FHRKKNLQYY+ISAKSNYNFEKPFL+LARKL G
Sbjct: 149 VKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIG 188
>UNIPROTKB|F5H018 [details] [associations]
symbol:RAN "GTP-binding nuclear protein Ran" species:9606
"Homo sapiens" [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006913 "nucleocytoplasmic transport" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR002041 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00627
PROSITE:PS51418 SMART:SM00176 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0006886 GO:GO:0007264 GO:GO:0003924 GO:GO:0006913
GO:GO:0005622 ChiTaRS:RAN HGNC:HGNC:9846 EMBL:AC073912
IPI:IPI01011282 ProteinModelPortal:F5H018 SMR:F5H018
Ensembl:ENST00000535090 ArrayExpress:F5H018 Bgee:F5H018
Uniprot:F5H018
Length = 199
Score = 723 (259.6 bits), Expect = 1.8e-71, P = 1.8e-71
Identities = 132/159 (83%), Positives = 144/159 (90%)
Query: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEK 74
+LV+VGDGGTGKTTFVKRHLTGEFEKKY T+GVEVHPL F TN G I+F WDTAGQEK
Sbjct: 8 QLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEK 67
Query: 75 FGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQV 134
FGGLRDGYYI QCAIIMFDVT+R+TYKNVP WHRDL RVCENIPIVLCGNKVD+K+R+V
Sbjct: 68 FGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKV 127
Query: 135 KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 173
KAK + FHRKKNLQYY+ISAKSNYNFEKPFL+LARKL G
Sbjct: 128 KAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIG 166
>UNIPROTKB|F1PR82 [details] [associations]
symbol:RAN "GTP-binding nuclear protein Ran" species:9615
"Canis lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
InterPro:IPR001806 InterPro:IPR002041 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00627 PROSITE:PS51418 SMART:SM00176
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0006886 GO:GO:0007264
GO:GO:0003924 GO:GO:0006913 GO:GO:0005622
GeneTree:ENSGT00700000104457 OMA:ERVCENI EMBL:AAEX03014591
Ensembl:ENSCAFT00000010749 Uniprot:F1PR82
Length = 216
Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
Identities = 132/158 (83%), Positives = 143/158 (90%)
Query: 16 LVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKF 75
LV+VGDGGTGKTTFVKRHLTGEFEKKY T+GVEVHPL F TN G I+F WDTAGQEKF
Sbjct: 13 LVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKF 72
Query: 76 GGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVK 135
GGLRDGYYI QCAIIMFDVT+R+TYKNVP WHRDL RVCENIPIVLCGNKVD+K+R+VK
Sbjct: 73 GGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKVK 132
Query: 136 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 173
AK + FHRKKNLQYY+ISAKSNYNFEKPFL+LARKL G
Sbjct: 133 AKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIG 170
>UNIPROTKB|B5MDF5 [details] [associations]
symbol:RAN "GTP-binding nuclear protein Ran" species:9606
"Homo sapiens" [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006913 "nucleocytoplasmic transport" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR002041 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00627
PROSITE:PS51418 SMART:SM00176 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0006886 GO:GO:0007264 GO:GO:0003924 GO:GO:0006913
EMBL:CH471054 GO:GO:0005622 HOGENOM:HOG000216664 HOVERGEN:HBG107376
OMA:ERVCENI ChiTaRS:RAN UniGene:Hs.10842 HGNC:HGNC:9846
EMBL:AC073912 IPI:IPI00795671 SMR:B5MDF5 STRING:B5MDF5
Ensembl:ENST00000392367 Uniprot:B5MDF5
Length = 233
Score = 412 (150.1 bits), Expect = 1.4e-70, Sum P(2) = 1.4e-70
Identities = 74/87 (85%), Positives = 82/87 (94%)
Query: 87 QCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKN 146
QCAIIMFDVT+R+TYKNVP WHRDL RVCENIPIVLCGNKVD+K+R+VKAK + FHRKKN
Sbjct: 101 QCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKVKAKSIVFHRKKN 160
Query: 147 LQYYEISAKSNYNFEKPFLYLARKLAG 173
LQYY+ISAKSNYNFEKPFL+LARKL G
Sbjct: 161 LQYYDISAKSNYNFEKPFLWLARKLIG 187
Score = 321 (118.1 bits), Expect = 1.4e-70, Sum P(2) = 1.4e-70
Identities = 60/71 (84%), Positives = 63/71 (88%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV+VGDGGTGKTTFVKRHLTGEFEKKY T+GVEVHPL F TN G I+F WDTAGQE
Sbjct: 11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQE 70
Query: 74 KFGGLRDGYYI 84
KFGGLRDGYYI
Sbjct: 71 KFGGLRDGYYI 81
>RGD|1306195 [details] [associations]
symbol:RGD1306195 "similar to RAN protein" species:10116 "Rattus
norvegicus" [GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA;ISO] InterPro:IPR001806 InterPro:IPR002041
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00627 PROSITE:PS51418
SMART:SM00176 RGD:1306195 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0006886 GO:GO:0007264 GO:GO:0032092 GO:GO:0003924
GO:GO:0006913 GO:GO:0000785 EMBL:CH473962
GeneTree:ENSGT00700000104457 HOGENOM:HOG000216664 KO:K07936
OMA:DANLHFV HOVERGEN:HBG107376 EMBL:BC082086 IPI:IPI00367214
RefSeq:NP_001014084.1 UniGene:Rn.107841 SMR:Q66H11 STRING:Q66H11
Ensembl:ENSRNOT00000050030 GeneID:313163 KEGG:rno:313163
UCSC:RGD:1306195 CTD:313163 InParanoid:Q66H11 OrthoDB:EOG46145X
NextBio:665737 Genevestigator:Q66H11 Uniprot:Q66H11
Length = 216
Score = 714 (256.4 bits), Expect = 1.6e-70, P = 1.6e-70
Identities = 131/163 (80%), Positives = 146/163 (89%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV+VGDGGTGKTTFVKRHLTGEFEKKY T+GVEVHPL F T+ G I+F WDTAGQE
Sbjct: 11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLMFHTSRGPIKFNVWDTAGQE 70
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQ 133
KFGGLRDGYYI Q AIIMFDVT+R+TYKNVP WHRDL RVCENIPIVLCGNKVDVK+R+
Sbjct: 71 KFGGLRDGYYIQAQGAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDVKDRK 130
Query: 134 VKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGSTD 176
VKAK + FHRKKNLQYY+ISAKSNYNFEKPFL+L+R+L G ++
Sbjct: 131 VKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLSRRLTGDSN 173
>RGD|2314256 [details] [associations]
symbol:Rasl2-9 "RAS-like, family 2, locus 9" species:10116
"Rattus norvegicus" [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR002041
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00627 PROSITE:PS51418
SMART:SM00176 RGD:2314256 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005634 GO:GO:0006886 GO:GO:0007264 GO:GO:0003924
GO:GO:0006913 eggNOG:COG1100 GeneTree:ENSGT00700000104457
HOGENOM:HOG000216664 KO:K07936 CTD:19428 HOVERGEN:HBG107376
OMA:GEFEKEY OrthoDB:EOG4640CV EMBL:AF507943 IPI:IPI00203730
RefSeq:NP_001160147.1 UniGene:Rn.201649 ProteinModelPortal:Q8K586
SMR:Q8K586 STRING:Q8K586 PRIDE:Q8K586 Ensembl:ENSRNOT00000050233
GeneID:751812 KEGG:rno:751812 UCSC:RGD:2314256 InParanoid:Q8K586
NextBio:744347 Genevestigator:Q8K586 Uniprot:Q8K586
Length = 216
Score = 704 (252.9 bits), Expect = 1.8e-69, P = 1.8e-69
Identities = 128/160 (80%), Positives = 143/160 (89%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV+VGDGGTGKTTF+KRHLTGEFEK+Y T+GVEVH L F TN G I+F WDTAGQE
Sbjct: 11 FKLVLVGDGGTGKTTFMKRHLTGEFEKEYVATLGVEVHTLVFHTNRGPIKFNVWDTAGQE 70
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQ 133
KFGGLRDGYYI QCAIIMFDVT+R+TYKNVP+WH+DL RVCENIPIVLCGNKVD+K+ +
Sbjct: 71 KFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPSWHKDLVRVCENIPIVLCGNKVDIKDMK 130
Query: 134 VKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 173
VKAK + FHRKKNLQYY+ISAKSNYNFEKPF +LARKL G
Sbjct: 131 VKAKPILFHRKKNLQYYDISAKSNYNFEKPFFWLARKLIG 170
>UNIPROTKB|G5E619 [details] [associations]
symbol:LOC786258 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0032092 "positive regulation of protein binding"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000785
"chromatin" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
InterPro:IPR001806 InterPro:IPR002041 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00627 PROSITE:PS51418 SMART:SM00176
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0006886 GO:GO:0007264
GO:GO:0003924 GO:GO:0006913 GO:GO:0005622
GeneTree:ENSGT00700000104457 OMA:ERVCENI EMBL:DAAA02071335
Ensembl:ENSBTAT00000018906 Uniprot:G5E619
Length = 216
Score = 699 (251.1 bits), Expect = 6.3e-69, P = 6.3e-69
Identities = 130/161 (80%), Positives = 143/161 (88%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFF-TNCGKIRFYCWDTAGQ 72
FKLV+VGDGGTGKTTFVK HLTGEFEK Y T+GVEVHPL F TN G I+F WDTAGQ
Sbjct: 11 FKLVLVGDGGTGKTTFVKHHLTGEFEK-YVATLGVEVHPLVVFHTNTGPIKFNVWDTAGQ 69
Query: 73 EKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNR 132
EKFGGLRDGYYI QCAIIMFDVT+R+TYKNVP WHRDL +VCENIPIVLCGNKVD+K+R
Sbjct: 70 EKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVQVCENIPIVLCGNKVDIKDR 129
Query: 133 QVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 173
+VKAK + FH+KKNLQYY+ISAKSNYNFEKPFL+LARKL G
Sbjct: 130 KVKAKSIVFHQKKNLQYYDISAKSNYNFEKPFLWLARKLIG 170
>MGI|MGI:104605 [details] [associations]
symbol:Rasl2-9 "RAS-like, family 2, locus 9" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR001806 InterPro:IPR002041 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00627 PROSITE:PS51418 SMART:SM00176
MGI:MGI:104605 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005634
GO:GO:0006886 GO:GO:0007264 GO:GO:0003924 GO:GO:0006913
eggNOG:COG1100 GeneTree:ENSGT00700000104457 HOGENOM:HOG000216664
KO:K07936 EMBL:L32752 EMBL:AK006350 EMBL:BC049619 EMBL:BC061180
EMBL:BC099553 IPI:IPI00126133 PIR:I76676 RefSeq:NP_033054.1
UniGene:Mm.322186 ProteinModelPortal:Q61820 SMR:Q61820
IntAct:Q61820 STRING:Q61820 PaxDb:Q61820 PRIDE:Q61820
Ensembl:ENSMUST00000147835 GeneID:19428 KEGG:mmu:19428 CTD:19428
HOVERGEN:HBG107376 InParanoid:Q61820 OMA:GEFEKEY OrthoDB:EOG4640CV
NextBio:296567 Bgee:Q61820 CleanEx:MM_RASL2-9 Genevestigator:Q61820
GermOnline:ENSMUSG00000050363 Uniprot:Q61820
Length = 216
Score = 699 (251.1 bits), Expect = 6.3e-69, P = 6.3e-69
Identities = 127/160 (79%), Positives = 143/160 (89%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FK+V+VGDGGTGKTTF+KRHLTGEFEK+Y T+GVEVH L F TN G I+F WDTAGQE
Sbjct: 11 FKVVLVGDGGTGKTTFMKRHLTGEFEKEYVATLGVEVHTLVFHTNRGPIKFNVWDTAGQE 70
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQ 133
KFGGLRDGYYI QCAIIMFDVT+R+TYKNVP+WH+DL RVCENIPIVLCGNKVDVK+ +
Sbjct: 71 KFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPSWHKDLVRVCENIPIVLCGNKVDVKDMK 130
Query: 134 VKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 173
VKAK + FHRKKNLQYY+ISA+SNYNFEKPF +LARKL G
Sbjct: 131 VKAKPILFHRKKNLQYYDISARSNYNFEKPFFWLARKLIG 170
>GENEDB_PFALCIPARUM|PF11_0183 [details] [associations]
symbol:PF11_0183 "GTP-binding nuclear protein
ran/tc4" species:5833 "Plasmodium falciparum" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006405 "RNA
export from nucleus" evidence=ISS] InterPro:IPR001806
InterPro:IPR002041 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00627
PROSITE:PS51418 SMART:SM00176 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005634 GO:GO:0006886 GO:GO:0007264 GO:GO:0003924
GO:GO:0051726 EMBL:AE014186 HSSP:P01112 HOGENOM:HOG000216664
KO:K07936 GO:GO:0006405 OMA:ERVCENI ProtClustDB:PTZ00132
GenomeReviews:AE014186_GR RefSeq:XP_001347854.1
ProteinModelPortal:Q7KQK6 PRIDE:Q7KQK6
EnsemblProtists:PF11_0183:mRNA GeneID:810730 KEGG:pfa:PF11_0183
EuPathDB:PlasmoDB:PF3D7_1117700 Uniprot:Q7KQK6
Length = 214
Score = 693 (249.0 bits), Expect = 2.7e-68, P = 2.7e-68
Identities = 124/170 (72%), Positives = 149/170 (87%)
Query: 3 LPSQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKI 62
+ SQ+ + P +KL++VGDGG GKTTFVKRHLTGEFEKKY PT+GVEVHPL F TN GK
Sbjct: 1 MDSQEYI--PQYKLILVGDGGVGKTTFVKRHLTGEFEKKYIPTLGVEVHPLKFQTNFGKT 58
Query: 63 RFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVL 122
+F WDTAGQEKFGGLRDGYYI CAIIMFDV++R+TYKNVP W+RD+ RVCE IP+VL
Sbjct: 59 QFNVWDTAGQEKFGGLRDGYYIKSDCAIIMFDVSSRITYKNVPNWYRDITRVCETIPMVL 118
Query: 123 CGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLA 172
GNKVDVK+RQVK++Q+ FHRK+NLQYY++SA+SNYNFEKPFL+LAR+L+
Sbjct: 119 VGNKVDVKDRQVKSRQIQFHRKRNLQYYDLSARSNYNFEKPFLWLARRLS 168
>UNIPROTKB|Q7KQK6 [details] [associations]
symbol:Ran "GTP-binding nuclear protein ran/tc4"
species:36329 "Plasmodium falciparum 3D7" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006405 "RNA export from nucleus" evidence=ISS] [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR001806
InterPro:IPR002041 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00627
PROSITE:PS51418 SMART:SM00176 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005634 GO:GO:0006886 GO:GO:0007264 GO:GO:0003924
GO:GO:0051726 EMBL:AE014186 HSSP:P01112 HOGENOM:HOG000216664
KO:K07936 GO:GO:0006405 OMA:ERVCENI ProtClustDB:PTZ00132
GenomeReviews:AE014186_GR RefSeq:XP_001347854.1
ProteinModelPortal:Q7KQK6 PRIDE:Q7KQK6
EnsemblProtists:PF11_0183:mRNA GeneID:810730 KEGG:pfa:PF11_0183
EuPathDB:PlasmoDB:PF3D7_1117700 Uniprot:Q7KQK6
Length = 214
Score = 693 (249.0 bits), Expect = 2.7e-68, P = 2.7e-68
Identities = 124/170 (72%), Positives = 149/170 (87%)
Query: 3 LPSQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKI 62
+ SQ+ + P +KL++VGDGG GKTTFVKRHLTGEFEKKY PT+GVEVHPL F TN GK
Sbjct: 1 MDSQEYI--PQYKLILVGDGGVGKTTFVKRHLTGEFEKKYIPTLGVEVHPLKFQTNFGKT 58
Query: 63 RFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVL 122
+F WDTAGQEKFGGLRDGYYI CAIIMFDV++R+TYKNVP W+RD+ RVCE IP+VL
Sbjct: 59 QFNVWDTAGQEKFGGLRDGYYIKSDCAIIMFDVSSRITYKNVPNWYRDITRVCETIPMVL 118
Query: 123 CGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLA 172
GNKVDVK+RQVK++Q+ FHRK+NLQYY++SA+SNYNFEKPFL+LAR+L+
Sbjct: 119 VGNKVDVKDRQVKSRQIQFHRKRNLQYYDLSARSNYNFEKPFLWLARRLS 168
>UNIPROTKB|G3MZP2 [details] [associations]
symbol:RAN "GTP-binding nuclear protein Ran" species:9913
"Bos taurus" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0006913 "nucleocytoplasmic transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] InterPro:IPR001806 InterPro:IPR002041
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00627 PROSITE:PS51418
SMART:SM00176 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0006886
GO:GO:0007264 GO:GO:0032092 GO:GO:0003924 GO:GO:0006913
GO:GO:0000785 GeneTree:ENSGT00700000104457 OMA:PEVHIDI
EMBL:DAAA02022982 Ensembl:ENSBTAT00000033457 NextBio:20871837
Uniprot:G3MZP2
Length = 216
Score = 689 (247.6 bits), Expect = 7.2e-68, P = 7.2e-68
Identities = 126/160 (78%), Positives = 140/160 (87%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV+VGDGGTGKTTFVKR LTGEFEKKY T+GVEVHPL F TN G+I+F WDTAGQE
Sbjct: 11 FKLVLVGDGGTGKTTFVKRRLTGEFEKKYVATLGVEVHPLVFHTNRGQIKFTVWDTAGQE 70
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQ 133
KFGGLRDGYYI QCA+IMFDVT+R+TYKNVP WHRDL RV E IP VLCGNKVD+K+++
Sbjct: 71 KFGGLRDGYYIQAQCAVIMFDVTSRVTYKNVPNWHRDLVRVWEGIPTVLCGNKVDIKDKK 130
Query: 134 VKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 173
VKAK + FHRKKNLQYY+ISAKSNY+FEKPF LARKL G
Sbjct: 131 VKAKSIVFHRKKNLQYYDISAKSNYSFEKPFFLLARKLIG 170
>DICTYBASE|DDB_G0291235 [details] [associations]
symbol:ranA "GTP-binding nuclear protein Ran"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0005813 "centrosome" evidence=TAS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0006913 "nucleocytoplasmic transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006184 "GTP
catabolic process" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR002041 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00627
PROSITE:PS51418 SMART:SM00176 dictyBase:DDB_G0291235 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005634 GO:GO:0005813 GO:GO:0006886
GO:GO:0007264 GO:GO:0045335 EMBL:AAFI02000177
GenomeReviews:CM000155_GR GO:GO:0003924 GO:GO:0006913
eggNOG:COG1100 KO:K07936 OMA:ERVCENI EMBL:L09720 PIR:S35619
RefSeq:XP_635125.1 ProteinModelPortal:P33519 SMR:P33519
IntAct:P33519 STRING:P33519 EnsemblProtists:DDB0215409
GeneID:8628071 KEGG:ddi:DDB_G0291235 ProtClustDB:PTZ00132
Uniprot:P33519
Length = 212
Score = 680 (244.4 bits), Expect = 6.5e-67, P = 6.5e-67
Identities = 121/160 (75%), Positives = 138/160 (86%)
Query: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEK 74
KLV+VGDGG GKTTFV+RHLTGEFE +Y PT+GV VHPL F+TN GKI F WDTAGQEK
Sbjct: 8 KLVLVGDGGVGKTTFVQRHLTGEFEPRYIPTLGVSVHPLIFYTNFGKIHFNVWDTAGQEK 67
Query: 75 FGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQV 134
FGGLRDGYYI G CAIIMFDVT+R++YKNVP WH DL RVCENIPIVLCGNKVDVK+R+V
Sbjct: 68 FGGLRDGYYIQGNCAIIMFDVTSRISYKNVPNWHSDLTRVCENIPIVLCGNKVDVKDRKV 127
Query: 135 KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGS 174
K Q+ FHR+ NL YY++SAKSNYNFEKPF++L KL G+
Sbjct: 128 KPSQIVFHRRYNLSYYDVSAKSNYNFEKPFVWLTSKLLGN 167
>FB|FBgn0036497 [details] [associations]
symbol:Ran-like "Ran-like" species:7227 "Drosophila
melanogaster" [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005525 "GTP binding"
evidence=IDA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0006184 "GTP catabolic process" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR002041
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00627 PROSITE:PS51418
SMART:SM00176 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005634
GO:GO:0005737 GO:GO:0006886 GO:GO:0007264 EMBL:AE014296
GO:GO:0003924 GO:GO:0006913 eggNOG:COG1100
GeneTree:ENSGT00700000104457 KO:K07936 EMBL:AY070523
RefSeq:NP_524082.1 UniGene:Dm.967 ProteinModelPortal:Q9VUN3
SMR:Q9VUN3 DIP:DIP-20704N IntAct:Q9VUN3 MINT:MINT-288264
STRING:Q9VUN3 PRIDE:Q9VUN3 EnsemblMetazoa:FBtr0075616 GeneID:39666
KEGG:dme:Dmel_CG7815 UCSC:CG7815-RA CTD:39666 FlyBase:FBgn0036497
InParanoid:Q9VUN3 OrthoDB:EOG4NGF3N PhylomeDB:Q9VUN3
GenomeRNAi:39666 NextBio:814770 Bgee:Q9VUN3 GermOnline:CG7815
Uniprot:Q9VUN3
Length = 217
Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
Identities = 103/160 (64%), Positives = 122/160 (76%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKL+++GDGGTGKTT VKRHLTGEF+ +Y T+GVEV L F TN G R WDTAGQE
Sbjct: 11 FKLILIGDGGTGKTTLVKRHLTGEFKMQYNATLGVEVEQLLFNTNRGVFRIDVWDTAGQE 70
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQ 133
++GGLRDGY++ QCAIIMFDV + TY NV WHRDL RVC NIPIV+CGNKVD+ +++
Sbjct: 71 RYGGLRDGYFVQSQCAIIMFDVASSNTYNNVKRWHRDLVRVCGNIPIVICGNKVDIMHKK 130
Query: 134 VKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 173
K V F RK N+ E+SAKSNYN EKPF+YL RKL G
Sbjct: 131 TWKKGVDFDRKTNIYLIEMSAKSNYNVEKPFVYLLRKLVG 170
>DICTYBASE|DDB_G0274943 [details] [associations]
symbol:ranB "GTP-binding nuclear protein Ran"
species:44689 "Dictyostelium discoideum" [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0006913 "nucleocytoplasmic
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR002041
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00627 SMART:SM00176
dictyBase:DDB_G0274943 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0006886 GO:GO:0007264 GO:GO:0003924 GO:GO:0006913
GenomeReviews:CM000151_GR EMBL:AAFI02000012 GO:GO:0005622
eggNOG:COG1100 RefSeq:XP_644189.1 ProteinModelPortal:Q554Y4
SMR:Q554Y4 EnsemblProtists:DDB0229425 GeneID:8619618
KEGG:ddi:DDB_G0274943 InParanoid:Q554Y4 Uniprot:Q554Y4
Length = 754
Score = 505 (182.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 90/161 (55%), Positives = 122/161 (75%)
Query: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEK 74
KL++VGD G GKTTF+KRH+ GEF+K + PT+GVE+ L +TN G + F WDT G EK
Sbjct: 54 KLILVGDSGVGKTTFLKRHIIGEFQKSHIPTVGVELSNLILYTNIGNVNFDIWDTCGDEK 113
Query: 75 FGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVKNRQ 133
F R YY+ QCAIIMFDV++R++Y+NVP+W +L + + NIPI+L GNKVD+K+R+
Sbjct: 114 FEVFRHLYYVGSQCAIIMFDVSSRVSYRNVPSWFNELTKELGNNIPIILVGNKVDIKDRK 173
Query: 134 VKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGS 174
VKAK++ FHR KN+ Y EIS+KSNY FE PF+ L + L+G+
Sbjct: 174 VKAKEINFHRSKNIHYCEISSKSNYKFETPFIQLIKILSGN 214
Score = 412 (150.1 bits), Expect = 9.5e-38, P = 9.5e-38
Identities = 78/175 (44%), Positives = 111/175 (63%)
Query: 2 ALPSQQTVDYPS-FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
+LP + D KLV++GDGG GK+T++ R LTGEFE +Y T G VH +F T G
Sbjct: 500 SLPVVKKFDNTKEIKLVLIGDGGVGKSTYINRLLTGEFETQYVATFGCSVHKFNFKTTIG 559
Query: 61 KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENI-P 119
+ F WD A G +RD Y +CAIIMFDV +R +Y++V W +L R+ + P
Sbjct: 560 DVNFSIWDMAFTRLPGAMRDDYMTGAECAIIMFDVCSRESYRSVNDWFNELLRITGKVVP 619
Query: 120 IVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGS 174
+VL GNKV+ +++ Q+ FHRKKN+ Y+E+S ++N+N EKPFL L R L+G+
Sbjct: 620 MVLVGNKVESMGKRINPSQIIFHRKKNISYFELSVRTNFNLEKPFLKLIRLLSGN 674
>UNIPROTKB|B4DV51 [details] [associations]
symbol:RAN "cDNA, FLJ79092, highly similar to GTP-binding
nuclear protein Ran" species:9606 "Homo sapiens" [GO:0003924
"GTPase activity" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR002041 Pfam:PF00071 PRINTS:PR00627
PROSITE:PS51418 SMART:SM00176 GO:GO:0005525 GO:GO:0006886
GO:GO:0007264 GO:GO:0003924 GO:GO:0006913 GO:GO:0005622
HOGENOM:HOG000216664 OrthoDB:EOG4640CV ChiTaRS:RAN UniGene:Hs.10842
HGNC:HGNC:9846 EMBL:AC073912 EMBL:AK300934 EMBL:AK316193
IPI:IPI00795109 SMR:B4DV51 STRING:B4DV51 Ensembl:ENST00000254675
Ensembl:ENST00000541630 HOVERGEN:HBG097113 Uniprot:B4DV51
Length = 128
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 69/82 (84%), Positives = 77/82 (93%)
Query: 92 MFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYE 151
MFDVT+R+TYKNVP WHRDL RVCENIPIVLCGNKVD+K+R+VKAK + FHRKKNLQYY+
Sbjct: 1 MFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKVKAKSIVFHRKKNLQYYD 60
Query: 152 ISAKSNYNFEKPFLYLARKLAG 173
ISAKSNYNFEKPFL+LARKL G
Sbjct: 61 ISAKSNYNFEKPFLWLARKLIG 82
>UNIPROTKB|H0YFC6 [details] [associations]
symbol:RAN "GTP-binding nuclear protein Ran" species:9606
"Homo sapiens" [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006913 "nucleocytoplasmic transport" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR002041 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
PROSITE:PS51418 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0006886
GO:GO:0007264 GO:GO:0003924 GO:GO:0006913 GO:GO:0005622 ChiTaRS:RAN
HGNC:HGNC:9846 EMBL:AC073912 Ensembl:ENST00000536606 Uniprot:H0YFC6
Length = 103
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 59/71 (83%), Positives = 63/71 (88%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
+KLV+VGDGGTGKTTFVKRHLTGEFEKKY T+GVEVHPL F TN G I+F WDTAGQE
Sbjct: 26 WKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQE 85
Query: 74 KFGGLRDGYYI 84
KFGGLRDGYYI
Sbjct: 86 KFGGLRDGYYI 96
>UNIPROTKB|O97572 [details] [associations]
symbol:RAB7A "Ras-related protein Rab-7a" species:9986
"Oryctolagus cuniculus" [GO:0005770 "late endosome" evidence=ISS]
[GO:0045022 "early endosome to late endosome transport"
evidence=ISS] [GO:0045335 "phagocytic vesicle" evidence=ISS]
[GO:0090383 "phagosome acidification" evidence=ISS] [GO:0090385
"phagosome-lysosome fusion" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042470
GO:GO:0007264 GO:GO:0045335 GO:GO:0015031 GO:GO:0005764
GO:GO:0005770 PROSITE:PS51419 GO:GO:0045022 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:7879 OrthoDB:EOG4QFWF4
EMBL:AF050174 RefSeq:NP_001075503.1 UniGene:Ocu.2322
ProteinModelPortal:O97572 SMR:O97572 PRIDE:O97572 GeneID:100008682
Uniprot:O97572
Length = 207
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 59/162 (36%), Positives = 92/162 (56%)
Query: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEK 74
K++I+GD G GKT+ + +++ +F +Y+ TIG + + + + WDTAGQE+
Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69
Query: 75 FGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDV 129
F L +Y C +++FDVTA T+K + +W + R EN P V+ GNK+D+
Sbjct: 70 FQSLSVAFYRGADCCVLVFDVTAPNTFKTLDSWRLEFLIQASPRDPENFPFVVLGNKIDL 129
Query: 130 KNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 169
+NRQV K Q + K N+ Y+E SAK N E+ F +AR
Sbjct: 130 ENRQVATKRAQAWSYSKNNIPYFETSAKEAINVEQAFQTIAR 171
>UNIPROTKB|E1C0F3 [details] [associations]
symbol:RAB7A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] [GO:0005764 "lysosome"
evidence=IEA] [GO:0005770 "late endosome" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006622 "protein targeting to
lysosome" evidence=IEA] [GO:0007174 "epidermal growth factor
catabolic process" evidence=IEA] [GO:0008333 "endosome to lysosome
transport" evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA]
[GO:0045022 "early endosome to late endosome transport"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 GO:GO:0003924 GO:GO:0005764 GO:GO:0005770
GO:GO:0033365 GO:GO:0008333 GO:GO:0045022 GO:GO:0019003 CTD:7879
KO:K07897 GeneTree:ENSGT00700000104345 OMA:SPRDPEH GO:GO:0007174
EMBL:AADN02014058 EMBL:AADN02014057 IPI:IPI00601244
RefSeq:XP_003642026.1 RefSeq:XP_414359.1 UniGene:Gga.5872
PRIDE:E1C0F3 Ensembl:ENSGALT00000009495 GeneID:416016
KEGG:gga:416016 NextBio:20819533 Uniprot:E1C0F3
Length = 207
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 59/162 (36%), Positives = 92/162 (56%)
Query: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEK 74
K++I+GD G GKT+ + +++ +F +Y+ TIG + + + + WDTAGQE+
Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69
Query: 75 FGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDV 129
F L +Y C +++FDVTA T+K + +W + R EN P V+ GNK+D+
Sbjct: 70 FQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDL 129
Query: 130 KNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 169
+NRQV K Q + K N+ Y+E SAK N E+ F +AR
Sbjct: 130 ENRQVTTKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171
>UNIPROTKB|F1MJQ1 [details] [associations]
symbol:RAB7A "Ras-related protein Rab-7a" species:9913 "Bos
taurus" [GO:0045022 "early endosome to late endosome transport"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA] [GO:0008333
"endosome to lysosome transport" evidence=IEA] [GO:0007174
"epidermal growth factor catabolic process" evidence=IEA]
[GO:0006622 "protein targeting to lysosome" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005770 "late
endosome" evidence=IEA] [GO:0005764 "lysosome" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 GO:GO:0003924 GO:GO:0005764 GO:GO:0005770
GO:GO:0033365 GO:GO:0008333 GO:GO:0045022 GO:GO:0019003
IPI:IPI00704752 UniGene:Bt.41314 GeneTree:ENSGT00700000104345
OMA:SPRDPEH GO:GO:0007174 EMBL:DAAA02054678
Ensembl:ENSBTAT00000013451 Uniprot:F1MJQ1
Length = 207
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 59/162 (36%), Positives = 92/162 (56%)
Query: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEK 74
K++I+GD G GKT+ + +++ +F +Y+ TIG + + + + WDTAGQE+
Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69
Query: 75 FGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDV 129
F L +Y C +++FDVTA T+K + +W + R EN P V+ GNK+D+
Sbjct: 70 FQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDL 129
Query: 130 KNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 169
+NRQV K Q + K N+ Y+E SAK N E+ F +AR
Sbjct: 130 ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171
>UNIPROTKB|P18067 [details] [associations]
symbol:RAB7A "Ras-related protein Rab-7a" species:9615
"Canis lupus familiaris" [GO:0045335 "phagocytic vesicle"
evidence=ISS] [GO:0090385 "phagosome-lysosome fusion" evidence=ISS]
[GO:0090383 "phagosome acidification" evidence=ISS] [GO:0045022
"early endosome to late endosome transport" evidence=IMP]
[GO:0007174 "epidermal growth factor catabolic process"
evidence=IMP] [GO:0005770 "late endosome" evidence=ISS] [GO:0042470
"melanosome" evidence=IEA] [GO:0030670 "phagocytic vesicle
membrane" evidence=IEA] [GO:0005764 "lysosome" evidence=IEA]
[GO:0019003 "GDP binding" evidence=IEA] [GO:0008333 "endosome to
lysosome transport" evidence=IEA] [GO:0006622 "protein targeting to
lysosome" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0042470
GO:GO:0007264 GO:GO:0045335 GO:GO:0015031 GO:GO:0003924
GO:GO:0005764 GO:GO:0005770 GO:GO:0033365 GO:GO:0008333
PROSITE:PS51419 GO:GO:0045022 eggNOG:COG1100 GO:GO:0019003
HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:7879 KO:K07897
OrthoDB:EOG4QFWF4 EMBL:M35522 PIR:B30413 RefSeq:NP_001003316.1
UniGene:Cfa.45048 ProteinModelPortal:P18067 SMR:P18067
STRING:P18067 PRIDE:P18067 Ensembl:ENSCAFT00000038482 GeneID:404007
KEGG:cfa:404007 GeneTree:ENSGT00700000104345 InParanoid:P18067
OMA:SPRDPEH BindingDB:P18067 NextBio:20817494 GO:GO:0007174
Uniprot:P18067
Length = 207
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 59/162 (36%), Positives = 92/162 (56%)
Query: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEK 74
K++I+GD G GKT+ + +++ +F +Y+ TIG + + + + WDTAGQE+
Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69
Query: 75 FGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDV 129
F L +Y C +++FDVTA T+K + +W + R EN P V+ GNK+D+
Sbjct: 70 FQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDL 129
Query: 130 KNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 169
+NRQV K Q + K N+ Y+E SAK N E+ F +AR
Sbjct: 130 ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171
>UNIPROTKB|P51149 [details] [associations]
symbol:RAB7A "Ras-related protein Rab-7a" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0045453 "bone resorption"
evidence=IEA] [GO:0048365 "Rac GTPase binding" evidence=IEA]
[GO:0097208 "alveolar lamellar body" evidence=IEA] [GO:0030670
"phagocytic vesicle membrane" evidence=IEA] [GO:0042470
"melanosome" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0090383 "phagosome acidification" evidence=IMP]
[GO:0090385 "phagosome-lysosome fusion" evidence=IMP] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0045022 "early endosome to
late endosome transport" evidence=IMP] [GO:0015031 "protein
transport" evidence=TAS] [GO:0005770 "late endosome" evidence=IDA]
[GO:0090382 "phagosome maturation" evidence=TAS] [GO:0005764
"lysosome" evidence=IDA] [GO:0006897 "endocytosis" evidence=TAS]
[GO:0005765 "lysosomal membrane" evidence=TAS] [GO:0019886 "antigen
processing and presentation of exogenous peptide antigen via MHC
class II" evidence=TAS] [GO:0006622 "protein targeting to lysosome"
evidence=IMP] [GO:0005525 "GTP binding" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0019003 "GDP binding"
evidence=IDA] [GO:0008333 "endosome to lysosome transport"
evidence=IMP] [GO:0007174 "epidermal growth factor catabolic
process" evidence=IMP] [GO:0006184 "GTP catabolic process"
evidence=IDA;TAS] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0042470
Reactome:REACT_6900 GO:GO:0007264 GO:GO:0045335
Pathway_Interaction_DB:il12_2pathway GO:GO:0005765 GO:GO:0019886
EMBL:CH471052 GO:GO:0003924 GO:GO:0006897 GO:GO:0005770
GO:GO:0008333 PROSITE:PS51419 GO:GO:0045022 GO:GO:0006622
eggNOG:COG1100 GO:GO:0019003 GO:GO:0090382 HOVERGEN:HBG009351
HOGENOM:HOG000233968 CTD:7879 KO:K07897 OrthoDB:EOG4QFWF4
OMA:SPRDPEH GO:GO:0007174 EMBL:X93499 EMBL:U44104 EMBL:AF050175
EMBL:AF498942 EMBL:AK000826 EMBL:AK290721 EMBL:BC008721
IPI:IPI00016342 PIR:JC5268 RefSeq:NP_004628.4 UniGene:Hs.741172
PDB:1T91 PDB:1YHN PDB:3LAW PDBsum:1T91 PDBsum:1YHN PDBsum:3LAW
ProteinModelPortal:P51149 SMR:P51149 DIP:DIP-39879N IntAct:P51149
MINT:MINT-4999676 STRING:P51149 PhosphoSite:P51149 DMDM:1709999
PaxDb:P51149 PeptideAtlas:P51149 PRIDE:P51149 DNASU:7879
Ensembl:ENST00000265062 GeneID:7879 KEGG:hsa:7879 UCSC:uc003eks.1
GeneCards:GC03P128444 HGNC:HGNC:9788 HPA:HPA006964 MIM:600882
MIM:602298 neXtProt:NX_P51149 Orphanet:99936 PharmGKB:PA162400619
InParanoid:P51149 PhylomeDB:P51149 ChiTaRS:RAB7A
EvolutionaryTrace:P51149 GenomeRNAi:7879 NextBio:30336
ArrayExpress:P51149 Bgee:P51149 CleanEx:HS_RAB7A
Genevestigator:P51149 GermOnline:ENSG00000075785 Uniprot:P51149
Length = 207
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 59/162 (36%), Positives = 92/162 (56%)
Query: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEK 74
K++I+GD G GKT+ + +++ +F +Y+ TIG + + + + WDTAGQE+
Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69
Query: 75 FGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDV 129
F L +Y C +++FDVTA T+K + +W + R EN P V+ GNK+D+
Sbjct: 70 FQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDL 129
Query: 130 KNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 169
+NRQV K Q + K N+ Y+E SAK N E+ F +AR
Sbjct: 130 ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171
>UNIPROTKB|Q5R9Y4 [details] [associations]
symbol:RAB7A "Ras-related protein Rab-7a" species:9601
"Pongo abelii" [GO:0005770 "late endosome" evidence=ISS]
[GO:0045022 "early endosome to late endosome transport"
evidence=ISS] [GO:0045335 "phagocytic vesicle" evidence=ISS]
[GO:0090383 "phagosome acidification" evidence=ISS] [GO:0090385
"phagosome-lysosome fusion" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042470
GO:GO:0007264 GO:GO:0045335 GO:GO:0015031 GO:GO:0005764
GO:GO:0005770 PROSITE:PS51419 GO:GO:0045022 HOVERGEN:HBG009351
CTD:7879 KO:K07897 EMBL:CR859246 RefSeq:NP_001127416.1
UniGene:Pab.19044 HSSP:P09527 ProteinModelPortal:Q5R9Y4 SMR:Q5R9Y4
PRIDE:Q5R9Y4 GeneID:100174486 KEGG:pon:100174486 Uniprot:Q5R9Y4
Length = 207
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 59/162 (36%), Positives = 92/162 (56%)
Query: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEK 74
K++I+GD G GKT+ + +++ +F +Y+ TIG + + + + WDTAGQE+
Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69
Query: 75 FGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDV 129
F L +Y C +++FDVTA T+K + +W + R EN P V+ GNK+D+
Sbjct: 70 FQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDL 129
Query: 130 KNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 169
+NRQV K Q + K N+ Y+E SAK N E+ F +AR
Sbjct: 130 ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171
>MGI|MGI:105068 [details] [associations]
symbol:Rab7 "RAB7, member RAS oncogene family" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005525 "GTP binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005764 "lysosome"
evidence=ISO] [GO:0005768 "endosome" evidence=IEA] [GO:0005770
"late endosome" evidence=ISO;IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006184 "GTP catabolic process" evidence=ISO]
[GO:0006622 "protein targeting to lysosome" evidence=ISO]
[GO:0006810 "transport" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=TAS] [GO:0007174 "epidermal growth
factor catabolic process" evidence=ISO] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0008333 "endosome
to lysosome transport" evidence=ISO] [GO:0015031 "protein
transport" evidence=IEA] [GO:0019003 "GDP binding" evidence=ISO]
[GO:0031410 "cytoplasmic vesicle" evidence=ISO] [GO:0045022 "early
endosome to late endosome transport" evidence=ISO] [GO:0045335
"phagocytic vesicle" evidence=ISO] [GO:0045453 "bone resorption"
evidence=ISO] [GO:0048365 "Rac GTPase binding" evidence=ISO]
[GO:0090383 "phagosome acidification" evidence=ISO] [GO:0090385
"phagosome-lysosome fusion" evidence=ISO] [GO:0097208 "alveolar
lamellar body" evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:105068 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
GO:GO:0042470 GO:GO:0006886 GO:GO:0007264 GO:GO:0045335
GO:GO:0003924 GO:GO:0005764 GO:GO:0005770 GO:GO:0033365
GO:GO:0008333 PROSITE:PS51419 GO:GO:0045022 eggNOG:COG1100
GO:GO:0019003 HOVERGEN:HBG009351 HOGENOM:HOG000233968 KO:K07897
OrthoDB:EOG4QFWF4 OMA:SPRDPEH GO:GO:0007174 EMBL:X89650
EMBL:AK005004 EMBL:BC004597 EMBL:BC086793 IPI:IPI00408892
PIR:S62733 RefSeq:NP_033031.2 UniGene:Mm.333233 UniGene:Mm.486309
ProteinModelPortal:P51150 SMR:P51150 STRING:P51150
PhosphoSite:P51150 PaxDb:P51150 PRIDE:P51150
Ensembl:ENSMUST00000095048 Ensembl:ENSMUST00000113596
Ensembl:ENSMUST00000113597 Ensembl:ENSMUST00000113598
Ensembl:ENSMUST00000113600 GeneID:19349 KEGG:mmu:19349 CTD:19349
InParanoid:P51150 NextBio:296377 Bgee:P51150 CleanEx:MM_RAB7
Genevestigator:P51150 Uniprot:P51150
Length = 207
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 59/162 (36%), Positives = 92/162 (56%)
Query: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEK 74
K++I+GD G GKT+ + +++ +F +Y+ TIG + + + + WDTAGQE+
Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69
Query: 75 FGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDV 129
F L +Y C +++FDVTA T+K + +W + R EN P V+ GNK+D+
Sbjct: 70 FQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDL 129
Query: 130 KNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 169
+NRQV K Q + K N+ Y+E SAK N E+ F +AR
Sbjct: 130 ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171
>RGD|61908 [details] [associations]
symbol:Rab7a "RAB7A, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0003924 "GTPase activity" evidence=ISO;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005764 "lysosome" evidence=IEA;ISO] [GO:0005770 "late endosome"
evidence=ISO;IDA;TAS] [GO:0005794 "Golgi apparatus"
evidence=IEA;ISO] [GO:0006184 "GTP catabolic process" evidence=ISO]
[GO:0006622 "protein targeting to lysosome" evidence=IEA;ISO]
[GO:0007174 "epidermal growth factor catabolic process"
evidence=IEA;ISO] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0008333 "endosome to lysosome
transport" evidence=IEA;ISO] [GO:0019003 "GDP binding"
evidence=ISO;IDA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0042470 "melanosome" evidence=IEA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=ISO] [GO:0045022 "early
endosome to late endosome transport" evidence=ISO;ISS] [GO:0045335
"phagocytic vesicle" evidence=ISO;ISS] [GO:0045453 "bone resorption"
evidence=IMP] [GO:0048365 "Rac GTPase binding" evidence=IPI]
[GO:0090383 "phagosome acidification" evidence=ISO;ISS] [GO:0090385
"phagosome-lysosome fusion" evidence=ISO;ISS] [GO:0097208 "alveolar
lamellar body" evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:61908 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042470
GO:GO:0007264 GO:GO:0045335 GO:GO:0015031 GO:GO:0003924
GO:GO:0005764 GO:GO:0097208 GO:GO:0005770 GO:GO:0045453
PROSITE:PS51419 GO:GO:0045022 eggNOG:COG1100 GO:GO:0019003
HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:7879 KO:K07897
OrthoDB:EOG4QFWF4 GeneTree:ENSGT00700000104345 OMA:SPRDPEH
EMBL:X12535 EMBL:AF286535 EMBL:AB158427 EMBL:AB158428 EMBL:BC072470
IPI:IPI00215564 PIR:S01934 RefSeq:NP_076440.1 UniGene:Rn.1425
PDB:1VG0 PDB:1VG1 PDB:1VG8 PDB:1VG9 PDBsum:1VG0 PDBsum:1VG1
PDBsum:1VG8 PDBsum:1VG9 ProteinModelPortal:P09527 SMR:P09527
IntAct:P09527 MINT:MINT-1775656 STRING:P09527 PhosphoSite:P09527
PRIDE:P09527 Ensembl:ENSRNOT00000016432 GeneID:29448 KEGG:rno:29448
UCSC:RGD:61908 InParanoid:P09527 EvolutionaryTrace:P09527
NextBio:609213 Genevestigator:P09527 GermOnline:ENSRNOG00000012247
Uniprot:P09527
Length = 207
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 59/162 (36%), Positives = 92/162 (56%)
Query: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEK 74
K++I+GD G GKT+ + +++ +F +Y+ TIG + + + + WDTAGQE+
Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69
Query: 75 FGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDV 129
F L +Y C +++FDVTA T+K + +W + R EN P V+ GNK+D+
Sbjct: 70 FQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDL 129
Query: 130 KNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 169
+NRQV K Q + K N+ Y+E SAK N E+ F +AR
Sbjct: 130 ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171
>ZFIN|ZDB-GENE-040426-1352 [details] [associations]
symbol:rab7 "RAB7, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040426-1352 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 HSSP:P35278 KO:K07897
OrthoDB:EOG4QFWF4 GeneTree:ENSGT00700000104345 CTD:19349
OMA:FETSAKV EMBL:CR854846 EMBL:BC054602 EMBL:BC155202
IPI:IPI00486424 RefSeq:NP_957222.1 UniGene:Dr.12260 SMR:Q7T2C6
STRING:Q7T2C6 Ensembl:ENSDART00000027014 GeneID:393902
KEGG:dre:393902 InParanoid:Q7T2C6 NextBio:20814880 Uniprot:Q7T2C6
Length = 207
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 59/162 (36%), Positives = 91/162 (56%)
Query: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEK 74
K++I+GD G GKT+ + +++ +F +Y+ TIG + + + + WDTAGQE+
Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69
Query: 75 FGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDV 129
F L +Y C +++FDVTA T+K + +W + R EN P V+ GNK+D+
Sbjct: 70 FQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDL 129
Query: 130 KNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 169
+NRQV K Q K N+ Y+E SAK N E+ F +AR
Sbjct: 130 ENRQVTTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIAR 171
>UNIPROTKB|Q3T0F5 [details] [associations]
symbol:RAB7A "Ras-related protein Rab-7a" species:9913 "Bos
taurus" [GO:0045335 "phagocytic vesicle" evidence=ISS] [GO:0090385
"phagosome-lysosome fusion" evidence=ISS] [GO:0090383 "phagosome
acidification" evidence=ISS] [GO:0045022 "early endosome to late
endosome transport" evidence=ISS] [GO:0005770 "late endosome"
evidence=ISS] [GO:0042470 "melanosome" evidence=IEA] [GO:0030670
"phagocytic vesicle membrane" evidence=IEA] [GO:0005764 "lysosome"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042470
GO:GO:0007264 GO:GO:0045335 GO:GO:0015031 GO:GO:0005764
GO:GO:0005770 PROSITE:PS51419 GO:GO:0045022 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 EMBL:BC102415
IPI:IPI00704752 RefSeq:NP_001030253.1 UniGene:Bt.41314
ProteinModelPortal:Q3T0F5 SMR:Q3T0F5 STRING:Q3T0F5 PRIDE:Q3T0F5
GeneID:509970 KEGG:bta:509970 CTD:7879 InParanoid:Q3T0F5 KO:K07897
OrthoDB:EOG4QFWF4 NextBio:20869222 Uniprot:Q3T0F5
Length = 207
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 58/162 (35%), Positives = 91/162 (56%)
Query: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEK 74
K++I+GD G GKT+ + +++ +F +Y+ TIG + + + + WDTAGQE+
Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69
Query: 75 FGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDV 129
F L +Y C +++FDVTA T+K + +W + R EN P V+ GNK+D+
Sbjct: 70 FQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDL 129
Query: 130 KNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 169
+NRQV K Q + K N+ Y+E SAK N E+ F + R
Sbjct: 130 ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIVR 171
>ZFIN|ZDB-GENE-040704-16 [details] [associations]
symbol:zgc:91909 "zgc:91909" species:7955 "Danio
rerio" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-040704-16 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 KO:K07897 GeneTree:ENSGT00700000104345
OMA:WETEMEL EMBL:CR855300 EMBL:BC072717 IPI:IPI00509134
RefSeq:NP_001002178.1 UniGene:Dr.32183 SMR:Q6GQM5 STRING:Q6GQM5
Ensembl:ENSDART00000004065 Ensembl:ENSDART00000124225 GeneID:431725
KEGG:dre:431725 InParanoid:Q6GQM5 NextBio:20830961 Uniprot:Q6GQM5
Length = 204
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 58/162 (35%), Positives = 91/162 (56%)
Query: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEK 74
K++I+GD G GKT+ + +++ +F +Y+ TIG + + + + WDTAGQE+
Sbjct: 10 KVIILGDSGVGKTSLMNQYVNNKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69
Query: 75 FGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRD-LCRVC----ENIPIVLCGNKVDV 129
F L +Y C ++++DVTA T+K + +W + L + EN P V+ GNK+D+
Sbjct: 70 FQSLGVAFYRGADCCVLVYDVTAPTTFKTLDSWRDEFLIQASTSDPENFPFVVLGNKIDL 129
Query: 130 KNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 169
NRQV K Q K N+ Y+E SAK N E+ F +AR
Sbjct: 130 DNRQVSTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIAR 171
>ZFIN|ZDB-GENE-040927-2 [details] [associations]
symbol:zgc:100918 "zgc:100918" species:7955 "Danio
rerio" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-040927-2 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 KO:K07897 OrthoDB:EOG4QFWF4
GeneTree:ENSGT00700000104345 EMBL:CABZ01063557 EMBL:CABZ01063558
EMBL:CABZ01063559 EMBL:CABZ01063560 EMBL:BC082296 IPI:IPI00484756
RefSeq:NP_001005591.1 UniGene:Dr.45927 SMR:Q641M4 STRING:Q641M4
Ensembl:ENSDART00000113926 Ensembl:ENSDART00000123608 GeneID:449549
KEGG:dre:449549 InParanoid:Q641M4 NextBio:20832667 Uniprot:Q641M4
Length = 205
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 57/162 (35%), Positives = 91/162 (56%)
Query: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEK 74
K++I+GD G GKT+ + +++ +F +Y+ TIG + + + + WDTAGQE+
Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69
Query: 75 FGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDV 129
F L +Y C ++++DVTA T+K + +W + R EN P V+ GNK+D+
Sbjct: 70 FQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDL 129
Query: 130 KNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 169
+NRQV K Q K N+ Y+E SAK N ++ F +AR
Sbjct: 130 ENRQVTTKRAQAWCQSKSNIPYFETSAKEAINVDQAFQTIAR 171
>FB|FBgn0015793 [details] [associations]
symbol:Rab19 "Rab19" species:7227 "Drosophila melanogaster"
[GO:0005525 "GTP binding" evidence=ISS] [GO:0005097 "Rab GTPase
activator activity" evidence=ISS] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0031982 "vesicle" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:AE014296 GO:GO:0015031
eggNOG:COG1100 GO:GO:0005097 KO:K07976 HSSP:P07560
GeneTree:ENSGT00700000104044 OMA:LIGDCGT EMBL:AY071400 EMBL:D84348
RefSeq:NP_523970.1 UniGene:Dm.2555 SMR:O18339
EnsemblMetazoa:FBtr0076705 EnsemblMetazoa:FBtr0331832 GeneID:38930
KEGG:dme:Dmel_CG7062 UCSC:CG7062-RA CTD:38930 FlyBase:FBgn0015793
InParanoid:O18339 OrthoDB:EOG4PG4GW GenomeRNAi:38930 NextBio:811064
Uniprot:O18339
Length = 219
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 65/181 (35%), Positives = 101/181 (55%)
Query: 1 MALPSQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
MALP+++ D+ FK+V++GD GTGKT V R TG + +++ TIGV+
Sbjct: 10 MALPNEEHFDF-LFKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGK 68
Query: 61 KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIP 119
+I+ WDTAGQE+F + YY +I++D+T R ++ N+ W ++ R N+
Sbjct: 69 QIKLQIWDTAGQERFRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVL 128
Query: 120 IVLCGNKVDVKN-RQV---KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGST 175
I+L GNK D++ R+V +A+Q+ + + L E SAK N N E F LA +L
Sbjct: 129 IILVGNKCDLEEQREVDFEEARQMCQYIPEILFVMETSAKENMNVEDAFRCLANELKRQH 188
Query: 176 D 176
D
Sbjct: 189 D 189
>UNIPROTKB|F1NTT5 [details] [associations]
symbol:RAB23 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0008589 "regulation of
smoothened signaling pathway" evidence=IEA] [GO:0021513 "spinal
cord dorsal/ventral patterning" evidence=IEA] [GO:0042733
"embryonic digit morphogenesis" evidence=IEA] [GO:0045861 "negative
regulation of proteolysis" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GO:GO:0045861 GO:GO:0008589
GeneTree:ENSGT00700000104457 OMA:VTEVFKY EMBL:AADN02002690
IPI:IPI00597769 Ensembl:ENSGALT00000026245 Uniprot:F1NTT5
Length = 237
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 56/160 (35%), Positives = 89/160 (55%)
Query: 13 SFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQ 72
+ K+V+VG+G GK++ ++R+ G F K Y+ TIGV+ N ++R WDTAGQ
Sbjct: 9 AIKVVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEEVRLMLWDTAGQ 68
Query: 73 EKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNR 132
E+F + YY Q +++F T R ++K +PTW + +IP VL NK+D+ +
Sbjct: 69 EEFDAITKAYYRGAQACVLVFSTTDRESFKAIPTWKEKVMTEVGDIPTVLVQNKIDLLDD 128
Query: 133 Q-VKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARK 170
+K ++ KK L++Y S K + N + F YLA K
Sbjct: 129 SCIKNEEAEALAKKLKLRFYRASVKEDLNITEVFKYLADK 168
>FB|FBgn0015795 [details] [associations]
symbol:Rab7 "Rab7" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS;NAS] [GO:0016197
"endosomal transport" evidence=IMP;TAS] [GO:0005770 "late endosome"
evidence=IDA] [GO:0008333 "endosome to lysosome transport"
evidence=IGI;IMP;TAS] [GO:0048102 "autophagic cell death"
evidence=IEP] [GO:0035071 "salivary gland cell autophagic cell
death" evidence=IEP] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0006897
"endocytosis" evidence=IMP] [GO:0033227 "dsRNA transport"
evidence=IMP] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISS] [GO:0044130 "negative
regulation of growth of symbiont in host" evidence=IMP] [GO:0048190
"wing disc dorsal/ventral pattern formation" evidence=IMP]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:AE014297 GO:GO:0048190 GO:GO:0007264
GO:GO:0005811 GO:GO:0015031 GO:GO:0003924 GO:GO:0006897
GO:GO:0005770 GO:GO:0044130 GO:GO:0008333 GO:GO:0033227
GO:GO:0035071 eggNOG:COG1100 KO:K07897 GeneTree:ENSGT00700000104345
OMA:SPRDPEH CTD:19349 HSSP:P32939 EMBL:AF079459 EMBL:AF263363
EMBL:AY060236 EMBL:BT124755 EMBL:AB035672 EMBL:AM294823
EMBL:AM294824 EMBL:AM294825 EMBL:AM294826 EMBL:AM294827
EMBL:AM294828 EMBL:AM294829 EMBL:AM294830 EMBL:AM294831
EMBL:AM294832 EMBL:AM294833 EMBL:FM245635 EMBL:FM245636
EMBL:FM245637 EMBL:FM245638 EMBL:FM245639 EMBL:FM245640
EMBL:FM245641 EMBL:FM245642 EMBL:FM245643 EMBL:FM245644
EMBL:FM245645 RefSeq:NP_001247276.1 RefSeq:NP_001247277.1
RefSeq:NP_524472.1 UniGene:Dm.1701 SMR:O76742 MINT:MINT-1017301
STRING:O76742 EnsemblMetazoa:FBtr0084503 EnsemblMetazoa:FBtr0308611
EnsemblMetazoa:FBtr0308612 GeneID:42841 KEGG:dme:Dmel_CG5915
UCSC:CG5915-RA FlyBase:FBgn0015795 InParanoid:O76742
OrthoDB:EOG4Q2BXM GenomeRNAi:42841 NextBio:830855 Uniprot:O76742
Length = 207
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 55/162 (33%), Positives = 88/162 (54%)
Query: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEK 74
K++I+GD GKT+ + +++ F +Y+ TIG + + N + WDTAGQE+
Sbjct: 10 KVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWDTAGQER 69
Query: 75 FGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDV 129
F L +Y C ++++DVTA ++KN+ +W + R ++ P V+ GNKVD+
Sbjct: 70 FQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPFVVLGNKVDL 129
Query: 130 KNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 169
NRQV + Q K ++ YYE SAK N E F +A+
Sbjct: 130 DNRQVSTRRAQQWCQSKNDIPYYETSAKEGINVEMAFQVIAK 171
>DICTYBASE|DDB_G0277101 [details] [associations]
symbol:rab11C "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0000331 "contractile vacuole"
evidence=IDA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 dictyBase:DDB_G0277101
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0016020
GO:GO:0015031 GenomeReviews:CM000151_GR GO:GO:0000331
PROSITE:PS51419 EMBL:AAFI02000019 eggNOG:COG1100 KO:K07976
HSSP:Q15907 OMA:GRIHEVV RefSeq:XP_642956.1
ProteinModelPortal:Q550H6 SMR:Q550H6 MINT:MINT-6947891 PRIDE:Q550H6
EnsemblProtists:DDB0229395 GeneID:8620825 KEGG:ddi:DDB_G0277101
Uniprot:Q550H6
Length = 224
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 56/165 (33%), Positives = 94/165 (56%)
Query: 3 LPSQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKI 62
+P ++ +Y FK+VI+GD GK+ + R EF +K + TIGV+ + I
Sbjct: 1 MPQEEEAEY-LFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKTI 59
Query: 63 RFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIV 121
CWDTAGQE+F + GYY A+I++D+T+++++KNV W +L + E +I I+
Sbjct: 60 TAQCWDTAGQERFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAEQDILIM 119
Query: 122 LCGNKVDVK-NRQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 164
+ GNK D++ +R+V K+ F + + E SA ++ N + F
Sbjct: 120 MVGNKSDLEMSREVPTKEAQAFAESNKISFLETSALNSTNVNQSF 164
>WB|WBGene00004271 [details] [associations]
symbol:rab-7 species:6239 "Caenorhabditis elegans"
[GO:0006184 "GTP catabolic process" evidence=IEA;IDA] [GO:0003924
"GTPase activity" evidence=IEA;ISS;IDA] [GO:0005525 "GTP binding"
evidence=IEA;ISS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0019915
"lipid storage" evidence=IMP] [GO:0008219 "cell death"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0043652 "engulfment of
apoptotic cell" evidence=IMP] [GO:0016197 "endosomal transport"
evidence=IMP] [GO:0001555 "oocyte growth" evidence=IMP] [GO:0031090
"organelle membrane" evidence=IDA] [GO:0005770 "late endosome"
evidence=IDA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IDA] [GO:0005764 "lysosome" evidence=IDA] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0090387 "phagolysosome
assembly involved in apoptotic cell clearance" evidence=IMP]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0008340 GO:GO:0009792 GO:GO:0007264
GO:GO:0030670 GO:GO:0002119 GO:GO:0015031 GO:GO:0008219
GO:GO:0018996 GO:GO:0003924 GO:GO:0010171 GO:GO:0040011
GO:GO:0005764 GO:GO:0016197 GO:GO:0005770 GO:GO:0019915
GO:GO:0043652 eggNOG:COG1100 GO:GO:0001555 HOGENOM:HOG000233968
KO:K07897 GeneTree:ENSGT00700000104345 OMA:SPRDPEH HSSP:P32939
EMBL:Z66516 GO:GO:0090387 PIR:T26119 RefSeq:NP_496549.1
ProteinModelPortal:Q23146 SMR:Q23146 IntAct:Q23146 STRING:Q23146
PaxDb:Q23146 EnsemblMetazoa:W03C9.3.1 EnsemblMetazoa:W03C9.3.2
EnsemblMetazoa:W03C9.3.3 GeneID:174834 KEGG:cel:CELE_W03C9.3
UCSC:W03C9.3.1 CTD:174834 WormBase:W03C9.3 InParanoid:Q23146
NextBio:885704 Uniprot:Q23146
Length = 209
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 58/163 (35%), Positives = 90/163 (55%)
Query: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEK 74
K++I+GD G GKT+ + +++ F +Y+ TIG + D + + WDTAGQE+
Sbjct: 11 KVIILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLTRDVNIDDRTVTLQIWDTAGQER 70
Query: 75 FGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDV 129
F L +Y C ++ FDVT ++K++ +W + R ++ P VL GNKVD+
Sbjct: 71 FQSLGVAFYRGADCCVLAFDVTNAASFKSLDSWRDEFLIQASPRDPDHFPFVLLGNKVDL 130
Query: 130 KN-RQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 169
++ R V +K Q K N+ YYE+SAK N E FL +AR
Sbjct: 131 ESQRAVSSKRAQSWCQTKGNIPYYEVSAKEALNVEAAFLAIAR 173
>DICTYBASE|DDB_G0277441 [details] [associations]
symbol:rabJ "Rab GTPase" species:44689 "Dictyostelium
discoideum" [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0277441 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
GenomeReviews:CM000151_GR EMBL:AAFI02000020 PROSITE:PS51419
eggNOG:COG1100 KO:K07976 HSSP:P20339 RefSeq:XP_642644.1
ProteinModelPortal:Q8MYF2 EnsemblProtists:DDB0229403 GeneID:8621060
KEGG:ddi:DDB_G0277441 OMA:KIKYLIW Uniprot:Q8MYF2
Length = 256
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 61/161 (37%), Positives = 89/161 (55%)
Query: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEK 74
K+V++G GKT R++ G F K+ TIG KI++ WD+AGQ++
Sbjct: 11 KVVLLGSSDVGKTALSLRYVDGIFPKRLTSTIGASFLTRTINIEGNKIKYLIWDSAGQDR 70
Query: 75 FGGLRDGYYIHGQC-AIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVK-N 131
F L YY G C AI++FD+T + T+ V W +L + E I +VLCGNK+D++ N
Sbjct: 71 FRSLATLYY-RGACVAILVFDITQQKTFDIVKGWVEELKANIQEEIIMVLCGNKIDLEQN 129
Query: 132 RQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKL 171
RQVK++ + + N Y E SAK N E FL + +KL
Sbjct: 130 RQVKSETAKLYADEINAMYVETSAKENEGVEGMFLEIGKKL 170
>MGI|MGI:1890695 [details] [associations]
symbol:Rab9 "RAB9, member RAS oncogene family" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=ISO] [GO:0005525 "GTP
binding" evidence=ISO] [GO:0005764 "lysosome" evidence=ISO]
[GO:0005768 "endosome" evidence=IEA] [GO:0005770 "late endosome"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=ISO] [GO:0006810
"transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0019003 "GDP
binding" evidence=ISO] [GO:0045335 "phagocytic vesicle"
evidence=ISO] [GO:0045921 "positive regulation of exocytosis"
evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:1890695 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 GO:GO:0005764
GO:GO:0005770 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
GO:GO:0045921 HOVERGEN:HBG009351 GeneTree:ENSGT00700000104345
KO:K07899 EMBL:AB027290 EMBL:AK010710 EMBL:AK017301 EMBL:AK032133
EMBL:BC008160 IPI:IPI00127820 RefSeq:NP_062747.1 UniGene:Mm.25306
PDB:1YZL PDBsum:1YZL ProteinModelPortal:Q9R0M6 SMR:Q9R0M6
STRING:Q9R0M6 PhosphoSite:Q9R0M6 PaxDb:Q9R0M6 PRIDE:Q9R0M6
Ensembl:ENSMUST00000112091 GeneID:56382 KEGG:mmu:56382 CTD:56382
InParanoid:Q9R0M6 EvolutionaryTrace:Q9R0M6 NextBio:312468
Bgee:Q9R0M6 CleanEx:MM_RAB9 Genevestigator:Q9R0M6
GermOnline:ENSMUSG00000040577 Uniprot:Q9R0M6
Length = 201
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 55/170 (32%), Positives = 89/170 (52%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FK++++GDGG GK++ + R++T +F+ + TIGVE D + + WDTAGQE
Sbjct: 8 FKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQE 67
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVD 128
+F LR +Y C ++ F V +++N+ W ++ E+ P V+ GNK D
Sbjct: 68 RFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKTD 127
Query: 129 VKNRQVKAKQVTFHRKKN--LQYYEISAKSNYNFEKPFLYLARKLAGSTD 176
+K RQV ++ K N Y+E SAK + N F R++ + D
Sbjct: 128 IKERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRILATED 177
>RGD|619740 [details] [associations]
symbol:Rab9a "RAB9A, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0003924 "GTPase activity"
evidence=IEA;ISO;ISS;TAS] [GO:0005525 "GTP binding"
evidence=IEA;ISO;ISS;TAS] [GO:0005764 "lysosome" evidence=IEA;ISO]
[GO:0005770 "late endosome" evidence=IEA;ISO] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA;ISO;ISS]
[GO:0030670 "phagocytic vesicle membrane" evidence=IEA] [GO:0045335
"phagocytic vesicle" evidence=ISO;ISS] [GO:0045453 "bone
resorption" evidence=TAS] [GO:0045921 "positive regulation of
exocytosis" evidence=IEA;ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:619740 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 GO:GO:0005764
GO:GO:0005770 GO:GO:0045453 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0019003 GO:GO:0045921 HOVERGEN:HBG009351 HOGENOM:HOG000233968
CTD:9367 KO:K07899 OMA:LIPTDTV OrthoDB:EOG4R7VBS EMBL:AF325692
EMBL:BC070502 IPI:IPI00200427 RefSeq:NP_445910.1 UniGene:Rn.35289
ProteinModelPortal:Q99P75 SMR:Q99P75 STRING:Q99P75 PRIDE:Q99P75
GeneID:84589 KEGG:rno:84589 UCSC:RGD:619740 InParanoid:Q99P75
NextBio:617185 Genevestigator:Q99P75 GermOnline:ENSRNOG00000030443
Uniprot:Q99P75
Length = 201
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 55/170 (32%), Positives = 89/170 (52%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FK++++GDGG GK++ + R++T +F+ + TIGVE D + + WDTAGQE
Sbjct: 8 FKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQE 67
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVD 128
+F LR +Y C ++ F V +++N+ W ++ E+ P V+ GNK D
Sbjct: 68 RFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKTD 127
Query: 129 VKNRQVKAKQVTFHRKKN--LQYYEISAKSNYNFEKPFLYLARKLAGSTD 176
+K RQV ++ K N Y+E SAK + N F R++ + D
Sbjct: 128 IKERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRILATED 177
>UNIPROTKB|Q99P75 [details] [associations]
symbol:Rab9a "Ras-related protein Rab-9A" species:10116
"Rattus norvegicus" [GO:0005764 "lysosome" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0045921 "positive regulation of exocytosis"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:619740 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 GO:GO:0005764
GO:GO:0005770 GO:GO:0045453 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0019003 GO:GO:0045921 HOVERGEN:HBG009351 HOGENOM:HOG000233968
CTD:9367 KO:K07899 OMA:LIPTDTV OrthoDB:EOG4R7VBS EMBL:AF325692
EMBL:BC070502 IPI:IPI00200427 RefSeq:NP_445910.1 UniGene:Rn.35289
ProteinModelPortal:Q99P75 SMR:Q99P75 STRING:Q99P75 PRIDE:Q99P75
GeneID:84589 KEGG:rno:84589 UCSC:RGD:619740 InParanoid:Q99P75
NextBio:617185 Genevestigator:Q99P75 GermOnline:ENSRNOG00000030443
Uniprot:Q99P75
Length = 201
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 55/170 (32%), Positives = 89/170 (52%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FK++++GDGG GK++ + R++T +F+ + TIGVE D + + WDTAGQE
Sbjct: 8 FKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQE 67
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVD 128
+F LR +Y C ++ F V +++N+ W ++ E+ P V+ GNK D
Sbjct: 68 RFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKTD 127
Query: 129 VKNRQVKAKQVTFHRKKN--LQYYEISAKSNYNFEKPFLYLARKLAGSTD 176
+K RQV ++ K N Y+E SAK + N F R++ + D
Sbjct: 128 IKERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRILATED 177
>TAIR|locus:2140045 [details] [associations]
symbol:RABH1c "RAB GTPase homolog H1C" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000139 "Golgi membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006499 "N-terminal protein
myristoylation" evidence=RCA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=RCA] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0006984 "ER-nucleus signaling
pathway" evidence=RCA] [GO:0009697 "salicylic acid biosynthetic
process" evidence=RCA] [GO:0009738 "abscisic acid mediated
signaling pathway" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA] [GO:0045087
"innate immune response" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0007264 GO:GO:0000139 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0016192 GO:GO:0015031 PROSITE:PS51419 EMBL:AL161596
eggNOG:COG1100 EMBL:AL035708 KO:K07976 HOGENOM:HOG000233968
HSSP:P20340 EMBL:AF325109 EMBL:AF386952 EMBL:BT000043
IPI:IPI00539855 PIR:T06095 RefSeq:NP_195699.1 UniGene:At.2863
ProteinModelPortal:Q9SMR4 SMR:Q9SMR4 STRING:Q9SMR4 PaxDb:Q9SMR4
PRIDE:Q9SMR4 EnsemblPlants:AT4G39890.1 GeneID:830148
KEGG:ath:AT4G39890 TAIR:At4g39890 InParanoid:Q9SMR4 OMA:PEGMIDI
PhylomeDB:Q9SMR4 ProtClustDB:CLSN2916092 Genevestigator:Q9SMR4
Uniprot:Q9SMR4
Length = 214
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 60/164 (36%), Positives = 87/164 (53%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV +GD GKT+ + R + +F+ Y+PTIG++ + +R WDTAGQE
Sbjct: 10 FKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC--ENIPIVLCGNKVD-VK 130
+F L Y AI+++DV+ R T+ N W D+ R N+ IVL GNK D V+
Sbjct: 70 RFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVLVGNKTDLVE 129
Query: 131 NRQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKLAG 173
RQV + K+ + + E SAK N+N + F +A L G
Sbjct: 130 KRQVSISEGEDKGKEYGVMFIETSAKENFNIKALFRKIAAALPG 173
>UNIPROTKB|Q17QB7 [details] [associations]
symbol:RAB30 "Ras-related protein Rab-30" species:9913 "Bos
taurus" [GO:0031985 "Golgi cisterna" evidence=ISS] [GO:0005802
"trans-Golgi network" evidence=ISS] [GO:0005801 "cis-Golgi network"
evidence=ISS] [GO:0007030 "Golgi organization" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 GO:GO:0005802 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0007030 GO:GO:0005801 GO:GO:0031985 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00700000104044 EMBL:BC118448
IPI:IPI00709312 RefSeq:NP_001069697.1 UniGene:Bt.91675
ProteinModelPortal:Q17QB7 SMR:Q17QB7 Ensembl:ENSBTAT00000003135
GeneID:540583 KEGG:bta:540583 CTD:27314 InParanoid:Q17QB7 KO:K07917
OMA:DYKFLFK OrthoDB:EOG43XV4G NextBio:20878714 Uniprot:Q17QB7
Length = 203
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 60/170 (35%), Positives = 92/170 (54%)
Query: 5 SQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRF 64
S + D+ FK+V++G+ G GKT V+R G F TIGV+ N K++
Sbjct: 2 SMEDYDF-LFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKL 60
Query: 65 YCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI-VLC 123
WDTAGQE+F + YY I+ +D+T +++ +P W R++ + N I VL
Sbjct: 61 QIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLV 120
Query: 124 GNKVDVKNRQVKAKQVT--FHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
GNK+D+ R+ ++Q F +++ Y E SAK + N EK FL LA +L
Sbjct: 121 GNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRL 170
>UNIPROTKB|E2RG98 [details] [associations]
symbol:RAB30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104044 CTD:27314 KO:K07917 OMA:DYKFLFK
EMBL:AAEX03012758 RefSeq:XP_533993.1 ProteinModelPortal:E2RG98
SMR:E2RG98 Ensembl:ENSCAFT00000007438 GeneID:476787 KEGG:cfa:476787
NextBio:20852396 Uniprot:E2RG98
Length = 203
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 60/170 (35%), Positives = 92/170 (54%)
Query: 5 SQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRF 64
S + D+ FK+V++G+ G GKT V+R G F TIGV+ N K++
Sbjct: 2 SMEDYDF-LFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKL 60
Query: 65 YCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI-VLC 123
WDTAGQE+F + YY I+ +D+T +++ +P W R++ + N I VL
Sbjct: 61 QIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLV 120
Query: 124 GNKVDVKNRQVKAKQVT--FHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
GNK+D+ R+ ++Q F +++ Y E SAK + N EK FL LA +L
Sbjct: 121 GNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRL 170
>UNIPROTKB|Q15771 [details] [associations]
symbol:RAB30 "Ras-related protein Rab-30" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0007030 "Golgi organization"
evidence=IMP] [GO:0005801 "cis-Golgi network" evidence=IDA]
[GO:0031985 "Golgi cisterna" evidence=IDA] [GO:0005802 "trans-Golgi
network" evidence=IDA] [GO:0003924 "GTPase activity" evidence=TAS]
[GO:0005795 "Golgi stack" evidence=TAS] [GO:0006184 "GTP catabolic
process" evidence=TAS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 GO:GO:0003924 GO:GO:0005802 PROSITE:PS51419
eggNOG:COG1100 GO:GO:0007030 GO:GO:0005801 GO:GO:0031985
HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:27314 KO:K07917
OMA:DYKFLFK OrthoDB:EOG43XV4G EMBL:U57092 EMBL:AF498956
EMBL:CR542106 EMBL:BC014213 IPI:IPI00302030 PIR:JC4962
RefSeq:NP_055303.2 UniGene:Hs.40758 PDB:2EW1 PDBsum:2EW1
ProteinModelPortal:Q15771 SMR:Q15771 IntAct:Q15771 STRING:Q15771
PhosphoSite:Q15771 DMDM:38258937 PaxDb:Q15771 PRIDE:Q15771
DNASU:27314 Ensembl:ENST00000260056 Ensembl:ENST00000527633
Ensembl:ENST00000533486 GeneID:27314 KEGG:hsa:27314 UCSC:uc001ozu.3
GeneCards:GC11M082692 HGNC:HGNC:9770 MIM:605693 neXtProt:NX_Q15771
PharmGKB:PA34121 InParanoid:Q15771 PhylomeDB:Q15771
EvolutionaryTrace:Q15771 GenomeRNAi:27314 NextBio:50315
ArrayExpress:Q15771 Bgee:Q15771 CleanEx:HS_RAB30
Genevestigator:Q15771 GermOnline:ENSG00000137502 Uniprot:Q15771
Length = 203
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 60/170 (35%), Positives = 92/170 (54%)
Query: 5 SQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRF 64
S + D+ FK+V++G+ G GKT V+R G F TIGV+ N K++
Sbjct: 2 SMEDYDF-LFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKL 60
Query: 65 YCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI-VLC 123
WDTAGQE+F + YY I+ +D+T +++ +P W R++ + N I VL
Sbjct: 61 QIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLV 120
Query: 124 GNKVDVKNRQVKAKQVT--FHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
GNK+D+ R+ ++Q F +++ Y E SAK + N EK FL LA +L
Sbjct: 121 GNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRL 170
>MGI|MGI:1923235 [details] [associations]
symbol:Rab30 "RAB30, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005801
"cis-Golgi network" evidence=ISO] [GO:0005802 "trans-Golgi network"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007030 "Golgi organization" evidence=ISO] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0031985 "Golgi cisterna" evidence=ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:1923235
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 GO:GO:0005802 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0007030 GO:GO:0005801 GO:GO:0031985 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00700000104044 CTD:27314
KO:K07917 OMA:DYKFLFK OrthoDB:EOG43XV4G EMBL:AF399756 EMBL:AK017185
EMBL:AK142206 EMBL:BC017550 IPI:IPI00331205 RefSeq:NP_083770.2
UniGene:Mm.389966 ProteinModelPortal:Q923S9 SMR:Q923S9
STRING:Q923S9 PhosphoSite:Q923S9 PaxDb:Q923S9 PRIDE:Q923S9
Ensembl:ENSMUST00000032879 Ensembl:ENSMUST00000107180 GeneID:75985
KEGG:mmu:75985 InParanoid:Q923S9 NextBio:344381 Bgee:Q923S9
CleanEx:MM_RAB30 Genevestigator:Q923S9
GermOnline:ENSMUSG00000030643 Uniprot:Q923S9
Length = 203
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 60/170 (35%), Positives = 92/170 (54%)
Query: 5 SQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRF 64
S + D+ FK+V++G+ G GKT V+R G F TIGV+ N K++
Sbjct: 2 SMEDYDF-LFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKL 60
Query: 65 YCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI-VLC 123
WDTAGQE+F + YY I+ +D+T +++ +P W R++ + N I VL
Sbjct: 61 QIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLV 120
Query: 124 GNKVDVKNRQVKAKQVT--FHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
GNK+D+ R+ ++Q F +++ Y E SAK + N EK FL LA +L
Sbjct: 121 GNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRL 170
>UNIPROTKB|D4AA97 [details] [associations]
symbol:Rab30 "RAB30, member RAS oncogene family, isoform
CRA_a" species:10116 "Rattus norvegicus" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:1309507 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 EMBL:CH473956 OMA:DYKFLFK OrthoDB:EOG43XV4G
IPI:IPI00781739 UniGene:Rn.161854 SMR:D4AA97
Ensembl:ENSRNOT00000055380 Uniprot:D4AA97
Length = 203
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 60/170 (35%), Positives = 92/170 (54%)
Query: 5 SQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRF 64
S + D+ FK+V++G+ G GKT V+R G F TIGV+ N K++
Sbjct: 2 SMEDYDF-LFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKL 60
Query: 65 YCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI-VLC 123
WDTAGQE+F + YY I+ +D+T +++ +P W R++ + N I VL
Sbjct: 61 QIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLV 120
Query: 124 GNKVDVKNRQVKAKQVT--FHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
GNK+D+ R+ ++Q F +++ Y E SAK + N EK FL LA +L
Sbjct: 121 GNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRL 170
>UNIPROTKB|F1NWF1 [details] [associations]
symbol:RAB30 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104044 OMA:DYKFLFK
EMBL:AADN02004733 EMBL:AADN02004734 IPI:IPI00589217
Ensembl:ENSGALT00000027882 Uniprot:F1NWF1
Length = 199
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 59/166 (35%), Positives = 91/166 (54%)
Query: 10 DYPS-FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWD 68
DY FK+V++G+ G GKT V+R G F TIGV+ N K++ WD
Sbjct: 1 DYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWD 60
Query: 69 TAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI-VLCGNKV 127
TAGQE+F + YY I+ +D+T +++ +P W R++ + N I VL GNK+
Sbjct: 61 TAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKI 120
Query: 128 DVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
D+ +++ ++Q F +++ Y E SAK + N EK FL LA +L
Sbjct: 121 DLADKREVSQQRAAEFSEAQDMYYLETSAKESDNVEKLFLDLACRL 166
>FB|FBgn0086913 [details] [associations]
symbol:Rab26 "Rab26" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005525 "GTP binding"
evidence=ISS] [GO:0031226 "intrinsic to plasma membrane"
evidence=ISS] [GO:0017157 "regulation of exocytosis" evidence=ISS]
[GO:0031982 "vesicle" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
EMBL:AE014296 GO:GO:0015031 GO:GO:0031226 PROSITE:PS51419
eggNOG:COG1100 GO:GO:0017157 GeneTree:ENSGT00700000104031 CTD:25837
EMBL:AY061826 RefSeq:NP_649303.2 UniGene:Dm.1033 HSSP:Q9ULW5
ProteinModelPortal:Q9VP48 SMR:Q9VP48 IntAct:Q9VP48 MINT:MINT-315772
PaxDb:Q9VP48 PRIDE:Q9VP48 EnsemblMetazoa:FBtr0112677 GeneID:40359
KEGG:dme:Dmel_CG34410 UCSC:CG34410-RB FlyBase:FBgn0086913
InParanoid:Q9VP48 OMA:THHDDAS OrthoDB:EOG4FFBHX GenomeRNAi:40359
NextBio:818369 Bgee:Q9VP48 Uniprot:Q9VP48
Length = 388
Score = 258 (95.9 bits), Expect = 3.8e-22, P = 3.8e-22
Identities = 58/173 (33%), Positives = 94/173 (54%)
Query: 4 PSQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEK-KYEPTIGVEVHPLDFFTNCGKI 62
P TV++ K +++GD G GKT+F+ ++ TGEF + T+G+ + + ++
Sbjct: 184 PFDDTVNH---KTILLGDSGVGKTSFLVKYNTGEFRLGSFSATVGIALTNKVVVVDGTRV 240
Query: 63 RFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIV 121
+ WDTAGQE+F + YY ++++DVT + TY N+ W ++ E++ IV
Sbjct: 241 KLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIV 300
Query: 122 LCGNKVDVKN--RQVKAKQ-VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
L GNK D RQVK + R+ N+ + E SAK+ N E F +AR+L
Sbjct: 301 LIGNKADCSGSERQVKREDGERLGREHNVPFMETSAKTGLNVELSFTAVARQL 353
>UNIPROTKB|E2QWS2 [details] [associations]
symbol:RAB23 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104457 CTD:51715 KO:K06234 OMA:VTEVFKY
EMBL:AAEX03008410 RefSeq:XP_538975.2 Ensembl:ENSCAFT00000003875
GeneID:481854 KEGG:cfa:481854 Uniprot:E2QWS2
Length = 237
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 53/160 (33%), Positives = 87/160 (54%)
Query: 13 SFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQ 72
+ K+V+VG+G GK++ ++R+ G F K Y+ TIGV+ N +R WDTAGQ
Sbjct: 9 AIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQ 68
Query: 73 EKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNR 132
E+F + YY Q +++F T R +++ + +W + +IP VL NK+D+ +
Sbjct: 69 EEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEVGDIPTVLVQNKIDLLDD 128
Query: 133 Q-VKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARK 170
+K ++ KK L++Y S K + N + F YLA K
Sbjct: 129 SCIKNEEAEALAKKLKLRFYRTSVKEDLNVTEVFKYLAEK 168
>UNIPROTKB|Q08DW1 [details] [associations]
symbol:RAB9A "RAB9A, member RAS oncogene family"
species:9913 "Bos taurus" [GO:0045921 "positive regulation of
exocytosis" evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA]
[GO:0005770 "late endosome" evidence=IEA] [GO:0005764 "lysosome"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0003924 GO:GO:0005764 GO:GO:0005770 eggNOG:COG1100
GO:GO:0019003 GO:GO:0045921 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104345 CTD:9367 KO:K07899 OMA:LIPTDTV
OrthoDB:EOG4R7VBS EMBL:DAAA02074911 UniGene:Bt.30852 EMBL:BC123543
IPI:IPI00807303 RefSeq:NP_001069006.1 SMR:Q08DW1
Ensembl:ENSBTAT00000014511 GeneID:511776 KEGG:bta:511776
InParanoid:Q08DW1 NextBio:20870093 Uniprot:Q08DW1
Length = 203
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 55/170 (32%), Positives = 89/170 (52%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FK++++GDGG GK++ + R++T +F+ + TIGVE D + + WDTAGQE
Sbjct: 8 FKVILLGDGGVGKSSLMNRYVTNKFDAQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQE 67
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVD 128
+F LR +Y C ++ F V +++N+ W ++ E+ P V+ GNKVD
Sbjct: 68 RFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKVD 127
Query: 129 VKNRQVKAKQVTFHRKKN--LQYYEISAKSNYNFEKPFLYLARKLAGSTD 176
+ RQV A++ + N Y+E SAK N F R++ + D
Sbjct: 128 ISERQVSAEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATED 177
>UNIPROTKB|E9PMJ1 [details] [associations]
symbol:RAB30 "Ras-related protein Rab-30" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 EMBL:AP000893
HGNC:HGNC:9770 EMBL:AP001767 IPI:IPI00978752
ProteinModelPortal:E9PMJ1 SMR:E9PMJ1 Ensembl:ENST00000531021
ArrayExpress:E9PMJ1 Bgee:E9PMJ1 Uniprot:E9PMJ1
Length = 168
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 59/167 (35%), Positives = 90/167 (53%)
Query: 5 SQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRF 64
S + D+ FK+V++G+ G GKT V+R G F TIGV+ N K++
Sbjct: 2 SMEDYDF-LFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKL 60
Query: 65 YCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI-VLC 123
WDTAGQE+F + YY I+ +D+T +++ +P W R++ + N I VL
Sbjct: 61 QIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLV 120
Query: 124 GNKVDVKNRQVKAKQVT--FHRKKNLQYYEISAKSNYNFEKPFLYLA 168
GNK+D+ R+ ++Q F +++ Y E SAK + N EK FL LA
Sbjct: 121 GNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLA 167
>UNIPROTKB|Q9ULC3 [details] [associations]
symbol:RAB23 "Ras-related protein Rab-23" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0008589
"regulation of smoothened signaling pathway" evidence=IEA]
[GO:0021513 "spinal cord dorsal/ventral patterning" evidence=IEA]
[GO:0042733 "embryonic digit morphogenesis" evidence=IEA]
[GO:0045861 "negative regulation of proteolysis" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0010008 "endosome
membrane" evidence=IEA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0005776 "autophagic vacuole" evidence=IDA]
[GO:0000045 "autophagic vacuole assembly" evidence=IMP] [GO:0006968
"cellular defense response" evidence=IMP] [GO:0003924 "GTPase
activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0042992 "negative regulation of transcription
factor import into nucleus" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0097094 "craniofacial suture morphogenesis"
evidence=IMP] [GO:0045335 "phagocytic vesicle" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 EMBL:CH471081
GO:GO:0015031 GO:GO:0003924 GO:GO:0005776 GO:GO:0000045
GO:GO:0045861 GO:GO:0006968 PROSITE:PS51419
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0042733
eggNOG:COG1100 EMBL:AL031321 GO:GO:0008589 GO:GO:0042992
GO:GO:0097094 HOGENOM:HOG000233968 EMBL:AB034244 EMBL:AB025427
EMBL:AF161486 EMBL:AF498951 EMBL:AK313796 EMBL:AY585189
EMBL:CR749371 EMBL:BC015021 IPI:IPI00008034 RefSeq:NP_057361.3
RefSeq:NP_899050.1 UniGene:Hs.555016 ProteinModelPortal:Q9ULC3
SMR:Q9ULC3 IntAct:Q9ULC3 STRING:Q9ULC3 PhosphoSite:Q9ULC3
DMDM:12643897 PaxDb:Q9ULC3 PRIDE:Q9ULC3 DNASU:51715
Ensembl:ENST00000317483 Ensembl:ENST00000468148 GeneID:51715
KEGG:hsa:51715 UCSC:uc003pds.3 CTD:51715 GeneCards:GC06M057100
HGNC:HGNC:14263 HPA:HPA029135 HPA:HPA029136 MIM:201000 MIM:606144
neXtProt:NX_Q9ULC3 Orphanet:65759 PharmGKB:PA34113
HOVERGEN:HBG100144 InParanoid:Q9ULC3 KO:K06234 OMA:VTEVFKY
OrthoDB:EOG4P2Q33 PhylomeDB:Q9ULC3 GenomeRNAi:51715 NextBio:55759
Bgee:Q9ULC3 CleanEx:HS_RAB23 Genevestigator:Q9ULC3
GermOnline:ENSG00000112210 GO:GO:0021513 Uniprot:Q9ULC3
Length = 237
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 53/160 (33%), Positives = 87/160 (54%)
Query: 13 SFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQ 72
+ K+V+VG+G GK++ ++R+ G F K Y+ TIGV+ N +R WDTAGQ
Sbjct: 9 AIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQ 68
Query: 73 EKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNR 132
E+F + YY Q +++F T R +++ V +W + +IP VL NK+D+ +
Sbjct: 69 EEFDAITKAYYRGAQACVLVFSTTDRESFEAVSSWREKVVAEVGDIPTVLVQNKIDLLDD 128
Query: 133 Q-VKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARK 170
+K ++ K+ L++Y S K + N + F YLA K
Sbjct: 129 SCIKNEEAEALAKRLKLRFYRTSVKEDLNVNEVFKYLAEK 168
>DICTYBASE|DDB_G0269236 [details] [associations]
symbol:rab7A "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0032010 "phagolysosome" evidence=IDA] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0005764 "lysosome"
evidence=IDA] [GO:0006909 "phagocytosis" evidence=IMP] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 dictyBase:DDB_G0269236
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005615
GO:GO:0007264 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
GO:GO:0045335 GO:GO:0015031 GO:GO:0006909 GO:GO:0005764
PROSITE:PS51419 eggNOG:COG1100 KO:K07897 OMA:SPRDPEH EMBL:U02928
RefSeq:XP_645911.1 ProteinModelPortal:P36411 SMR:P36411
STRING:P36411 PRIDE:P36411 EnsemblProtists:DDB0191507
GeneID:8616852 KEGG:ddi:DDB_G0269236 ProtClustDB:CLSZ2729277
Uniprot:P36411
Length = 203
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 51/163 (31%), Positives = 93/163 (57%)
Query: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEK 74
K++I+GD G GKT+ + +++ +F +Y+ TIG + + + + WDTAGQE+
Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKELMVDDRVVTMQIWDTAGQER 69
Query: 75 FGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDV 129
F L +Y C ++ +DV T++N+ +W + R +N P V+ GNK+D+
Sbjct: 70 FQSLGVAFYRGADCCVLCYDVNVAKTFENLDSWRDEFLIQAGPRDPDNFPFVVLGNKIDL 129
Query: 130 KNRQVKAKQ--VTFHRKK-NLQYYEISAKSNYNFEKPFLYLAR 169
+N++V +++ ++ + K N+ Y+E SAK N E+ F +AR
Sbjct: 130 ENQRVVSQKRAASWCQSKGNIPYFETSAKEAINVEQAFQTIAR 172
>FB|FBgn0037364 [details] [associations]
symbol:Rab23 "Rab23" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0031982 "vesicle" evidence=ISS] [GO:0001738
"morphogenesis of a polarized epithelium" evidence=IMP] [GO:0007224
"smoothened signaling pathway" evidence=IMP] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:AE014297 GO:GO:0005737 GO:GO:0007264
GO:GO:0015031 GO:GO:0001738 eggNOG:COG1100
GeneTree:ENSGT00700000104457 HSSP:P07560 CTD:51715 KO:K06234
EMBL:AY113574 RefSeq:NP_649574.1 UniGene:Dm.11663 SMR:Q9VNG6
IntAct:Q9VNG6 MINT:MINT-286009 EnsemblMetazoa:FBtr0078727
GeneID:40701 KEGG:dme:Dmel_CG2108 UCSC:CG2108-RA
FlyBase:FBgn0037364 InParanoid:Q9VNG6 OMA:RIMLWDT OrthoDB:EOG4TTF0X
GenomeRNAi:40701 NextBio:820138 Uniprot:Q9VNG6
Length = 268
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 55/160 (34%), Positives = 85/160 (53%)
Query: 13 SFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQ 72
+ K+VIVG+GG GK++ ++R+ G F K Y+ TIGV+ + +R WDTAGQ
Sbjct: 37 AIKVVIVGNGGVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIEIDGEDVRIMLWDTAGQ 96
Query: 73 EKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVD-VKN 131
E+F + YY Q ++++F T R ++ + W R + C IP V+ NK+D ++
Sbjct: 97 EEFDCITKAYYRGAQASVLVFSTTDRASFDAIKDWKRKVENECNEIPTVIVQNKIDLIEQ 156
Query: 132 RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPFLYLARK 170
V A +V T + N + S K + N F YLA K
Sbjct: 157 AVVTADEVETLAKLLNCRLIRTSVKEDINVASVFRYLATK 196
>UNIPROTKB|F1P278 [details] [associations]
symbol:RAB19 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104044 OMA:RNSLHLY
EMBL:AADN02006362 IPI:IPI00604193 Ensembl:ENSGALT00000020960
Uniprot:F1P278
Length = 212
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 60/166 (36%), Positives = 92/166 (55%)
Query: 10 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 69
DY FK++++GD GKT V R TG+F +K + TIGV+ + K++ WDT
Sbjct: 11 DY-LFKIILIGDSNVGKTCVVHRFKTGQFYEKQQNTIGVDFTVRSMDIDGKKVKIQVWDT 69
Query: 70 AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV-CENIPIVLCGNKVD 128
AGQE+F + YY AI+ +D+T R T++++P W ++ + N+ ++L GNK D
Sbjct: 70 AGQERFRTITQSYYRSAHGAILAYDLTRRSTFESIPHWVHEVEKYGAANLVMMLIGNKSD 129
Query: 129 -VKNRQVKAKQV-TFHRKKNL-QYYEISAKSNYNFEKPFLYLARKL 171
V RQV + T K L E SAK N E+ F+ +A++L
Sbjct: 130 SVDKRQVLFEDACTLAEKYGLLAVLETSAKEAQNIEEVFVLMAKEL 175
>UNIPROTKB|Q5ZIT5 [details] [associations]
symbol:RAB10 "Ras-related protein Rab-10" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0097051 "establishment of protein
localization to endoplasmic reticulum membrane" evidence=ISS]
[GO:0005789 "endoplasmic reticulum membrane" evidence=ISS]
[GO:0071786 "endoplasmic reticulum tubular network organization"
evidence=ISS] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0055038 "recycling endosome membrane"
evidence=IEA] [GO:0061467 "basolateral protein localization"
evidence=ISS] [GO:0016197 "endosomal transport" evidence=ISS]
[GO:0005768 "endosome" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=ISS] [GO:0055037 "recycling endosome" evidence=ISS]
[GO:0072372 "primary cilium" evidence=ISS] [GO:0032593
"insulin-responsive compartment" evidence=ISS] [GO:0030859
"polarized epithelial cell differentiation" evidence=ISS]
[GO:0043001 "Golgi to plasma membrane protein transport"
evidence=ISS] [GO:0000145 "exocyst" evidence=ISS] [GO:0005794
"Golgi apparatus" evidence=ISS] [GO:0005802 "trans-Golgi network"
evidence=ISS] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] [GO:0032869 "cellular response to insulin stimulus"
evidence=ISS] [GO:0072659 "protein localization to plasma membrane"
evidence=ISS] [GO:0006893 "Golgi to plasma membrane transport"
evidence=ISS] [GO:0007409 "axonogenesis" evidence=ISS] [GO:0045200
"establishment of neuroblast polarity" evidence=ISS] [GO:0005525
"GTP binding" evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS]
[GO:0071782 "endoplasmic reticulum tubular network" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264 GO:GO:0030670
GO:GO:0032869 GO:GO:0016197 GO:GO:0055037 GO:GO:0007409
GO:GO:0005802 GO:GO:0072372 GO:GO:0072659 PROSITE:PS51419
GO:GO:0032593 GO:GO:0043001 GO:GO:0055038 eggNOG:COG1100
GO:GO:0019003 HOVERGEN:HBG009351 GO:GO:0045200 GO:GO:0030859
HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6 EMBL:AJ720699
IPI:IPI00593138 RefSeq:NP_001026268.1 UniGene:Gga.2486 HSSP:P55258
ProteinModelPortal:Q5ZIT5 SMR:Q5ZIT5 PRIDE:Q5ZIT5 GeneID:421994
KEGG:gga:421994 CTD:10890 InParanoid:Q5ZIT5 KO:K07903
NextBio:20824687 Uniprot:Q5ZIT5
Length = 200
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 57/174 (32%), Positives = 97/174 (55%)
Query: 5 SQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRF 64
+++T D FKL+++GD G GKT + R F + TIG+++ KI+
Sbjct: 2 AKKTYDL-LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDLKIKTVELQGKKIKL 60
Query: 65 YCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLC 123
WDTAGQE+F + YY ++++D+T +++N+ W R++ E++ +L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLL 120
Query: 124 GNKVDVKNRQV--KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGST 175
GNK D+++++V KAK R+ ++++E SAK+N N EK FL LA + T
Sbjct: 121 GNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT 174
>UNIPROTKB|F1SRI1 [details] [associations]
symbol:RAB9A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045921 "positive regulation of exocytosis"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA] [GO:0005770
"late endosome" evidence=IEA] [GO:0005764 "lysosome" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0003924 GO:GO:0005764 GO:GO:0005770 GO:GO:0019003
GO:GO:0045921 GeneTree:ENSGT00700000104345 CTD:9367 KO:K07899
OMA:LIPTDTV EMBL:CU633939 RefSeq:NP_001231676.1 UniGene:Ssc.1863
Ensembl:ENSSSCT00000013262 Ensembl:ENSSSCT00000032742
Ensembl:ENSSSCT00000032916 GeneID:100513057 KEGG:ssc:100513057
Uniprot:F1SRI1
Length = 201
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 54/170 (31%), Positives = 89/170 (52%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FK++++GDGG GK++ + R++T +F+ + TIGVE D + + WDTAGQE
Sbjct: 8 FKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQE 67
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVD 128
+F LR +Y C ++ F V +++N+ W ++ E+ P V+ GNK+D
Sbjct: 68 RFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKID 127
Query: 129 VKNRQVKAKQVTFHRKKN--LQYYEISAKSNYNFEKPFLYLARKLAGSTD 176
+ RQV A++ + N Y+E SAK N F R++ + D
Sbjct: 128 ISERQVSAEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATED 177
>UNIPROTKB|K7GKQ1 [details] [associations]
symbol:RAB9A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 TIGRFAMs:TIGR00231 GeneTree:ENSGT00700000104345
EMBL:CU633939 Ensembl:ENSSSCT00000035054 Uniprot:K7GKQ1
Length = 177
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 54/170 (31%), Positives = 89/170 (52%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FK++++GDGG GK++ + R++T +F+ + TIGVE D + + WDTAGQE
Sbjct: 8 FKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQE 67
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVD 128
+F LR +Y C ++ F V +++N+ W ++ E+ P V+ GNK+D
Sbjct: 68 RFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKID 127
Query: 129 VKNRQVKAKQVTFHRKKN--LQYYEISAKSNYNFEKPFLYLARKLAGSTD 176
+ RQV A++ + N Y+E SAK N F R++ + D
Sbjct: 128 ISERQVSAEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATED 177
>WB|WBGene00004268 [details] [associations]
symbol:rab-5 species:6239 "Caenorhabditis elegans"
[GO:0006184 "GTP catabolic process" evidence=IEA;IDA] [GO:0003924
"GTPase activity" evidence=IEA;IDA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0007028 "cytoplasm organization"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0008219 "cell
death" evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0009306 "protein secretion" evidence=IMP]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0006952
"defense response" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0008105
"asymmetric protein localization" evidence=IMP] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0005768 "endosome" evidence=IDA]
[GO:0005769 "early endosome" evidence=IDA] [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0090386 "phagosome maturation involved
in apoptotic cell clearance" evidence=IMP] [GO:0032794 "GTPase
activating protein binding" evidence=IPI] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005938
GO:GO:0008340 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0006915 GO:GO:0007264 GO:GO:0045335 GO:GO:0006952
GO:GO:0002119 GO:GO:0018996 GO:GO:0003924 GO:GO:0000003
GO:GO:0009306 GO:GO:0000910 GO:GO:0030163 GO:GO:0008105
GO:GO:0005769 eggNOG:COG1100 GO:GO:0090386 GO:GO:0007028 KO:K07976
HOGENOM:HOG000233968 HSSP:P35278 GeneTree:ENSGT00640000091139
EMBL:Z81516 PIR:T21442 RefSeq:NP_492481.1 ProteinModelPortal:P91857
SMR:P91857 IntAct:P91857 STRING:P91857 PaxDb:P91857
EnsemblMetazoa:F26H9.6.1 EnsemblMetazoa:F26H9.6.2 GeneID:172755
KEGG:cel:CELE_F26H9.6 UCSC:F26H9.6.1 CTD:172755 WormBase:F26H9.6
InParanoid:P91857 OMA:RAVDFQV NextBio:876883 Uniprot:P91857
Length = 208
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 57/161 (35%), Positives = 91/161 (56%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV++G+ GK++ V R + G+F + E TIG + I+F WDTAGQE
Sbjct: 20 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWDTAGQE 79
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKN- 131
++ L YY Q AI+++D+T + +++ W ++L R NI + L GNK DV N
Sbjct: 80 RYHSLAPMYYRGAQAAIVVYDITNQESFQKAKNWVKELQRQASPNIVMALAGNKADVANK 139
Query: 132 RQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARKL 171
R V+ ++ + + N L + E SAK++ N F+ +A+KL
Sbjct: 140 RTVEYEEANAYAEDNALLFMETSAKTSMNVNDIFMAIAKKL 180
>UNIPROTKB|P91857 [details] [associations]
symbol:rab-5 "Protein RAB-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005938 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0006915 GO:GO:0007264
GO:GO:0045335 GO:GO:0006952 GO:GO:0002119 GO:GO:0018996
GO:GO:0003924 GO:GO:0000003 GO:GO:0009306 GO:GO:0000910
GO:GO:0030163 GO:GO:0008105 GO:GO:0005769 eggNOG:COG1100
GO:GO:0090386 GO:GO:0007028 KO:K07976 HOGENOM:HOG000233968
HSSP:P35278 GeneTree:ENSGT00640000091139 EMBL:Z81516 PIR:T21442
RefSeq:NP_492481.1 ProteinModelPortal:P91857 SMR:P91857
IntAct:P91857 STRING:P91857 PaxDb:P91857 EnsemblMetazoa:F26H9.6.1
EnsemblMetazoa:F26H9.6.2 GeneID:172755 KEGG:cel:CELE_F26H9.6
UCSC:F26H9.6.1 CTD:172755 WormBase:F26H9.6 InParanoid:P91857
OMA:RAVDFQV NextBio:876883 Uniprot:P91857
Length = 208
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 57/161 (35%), Positives = 91/161 (56%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV++G+ GK++ V R + G+F + E TIG + I+F WDTAGQE
Sbjct: 20 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWDTAGQE 79
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKN- 131
++ L YY Q AI+++D+T + +++ W ++L R NI + L GNK DV N
Sbjct: 80 RYHSLAPMYYRGAQAAIVVYDITNQESFQKAKNWVKELQRQASPNIVMALAGNKADVANK 139
Query: 132 RQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARKL 171
R V+ ++ + + N L + E SAK++ N F+ +A+KL
Sbjct: 140 RTVEYEEANAYAEDNALLFMETSAKTSMNVNDIFMAIAKKL 180
>UNIPROTKB|E1BAI0 [details] [associations]
symbol:RAB23 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045861 "negative regulation of proteolysis"
evidence=IEA] [GO:0042733 "embryonic digit morphogenesis"
evidence=IEA] [GO:0021513 "spinal cord dorsal/ventral patterning"
evidence=IEA] [GO:0008589 "regulation of smoothened signaling
pathway" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0045861
GO:GO:0042733 GO:GO:0008589 GeneTree:ENSGT00700000104457 CTD:51715
KO:K06234 OMA:VTEVFKY GO:GO:0021513 EMBL:DAAA02054803
EMBL:DAAA02054804 IPI:IPI00696030 RefSeq:NP_001193835.1
UniGene:Bt.62609 Ensembl:ENSBTAT00000007050 GeneID:618588
KEGG:bta:618588 NextBio:20901259 Uniprot:E1BAI0
Length = 237
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 52/160 (32%), Positives = 86/160 (53%)
Query: 13 SFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQ 72
+ K+V+VG+G GK++ ++R+ G F K Y+ TIGV+ N +R WDTAGQ
Sbjct: 9 AIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQ 68
Query: 73 EKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNR 132
E+F + YY Q +++F T R +++ + +W + +IP L NK+D+ +
Sbjct: 69 EEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEVGDIPTALVQNKIDLLDD 128
Query: 133 Q-VKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARK 170
+K ++ KK L++Y S K + N + F YLA K
Sbjct: 129 SCIKNEEAEALAKKLKLRFYRTSVKEDLNVSEVFKYLAEK 168
>UNIPROTKB|E2QW69 [details] [associations]
symbol:RAB5B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030742 "GTP-dependent protein binding"
evidence=IEA] [GO:0030139 "endocytic vesicle" evidence=IEA]
[GO:0030100 "regulation of endocytosis" evidence=IEA] [GO:0007032
"endosome organization" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GO:GO:0005768 GO:GO:0030100 GO:GO:0030139
GO:GO:0007032 GeneTree:ENSGT00640000091139 CTD:5869 KO:K07888
OMA:GTQGKIC EMBL:AAEX03006917 RefSeq:XP_531627.2
ProteinModelPortal:E2QW69 SMR:E2QW69 PRIDE:E2QW69
Ensembl:ENSCAFT00000000142 GeneID:474394 KEGG:cfa:474394
NextBio:20850419 Uniprot:E2QW69
Length = 215
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 59/164 (35%), Positives = 90/164 (54%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV++G+ GK++ V R + G+F + E TIG + ++F WDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQE 80
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKN- 131
++ L YY Q AI+++D+T + T+ TW ++L R +I I L GNK D+ N
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANK 140
Query: 132 RQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARKLAGS 174
R V+ ++ + N L + E SAK+ N FL +A+KL S
Sbjct: 141 RMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKS 184
>UNIPROTKB|P61020 [details] [associations]
symbol:RAB5B "Ras-related protein Rab-5B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007032 "endosome
organization" evidence=IEA] [GO:0030100 "regulation of endocytosis"
evidence=IEA] [GO:0030139 "endocytic vesicle" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0031901 "early
endosome membrane" evidence=IEA] [GO:0042470 "melanosome"
evidence=IEA] [GO:0030742 "GTP-dependent protein binding"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0019003 "GDP binding"
evidence=IDA] [GO:0003924 "GTPase activity" evidence=TAS]
[GO:0016020 "membrane" evidence=TAS] [GO:0005622 "intracellular"
evidence=IDA] [GO:0006184 "GTP catabolic process" evidence=TAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0042470 GO:GO:0007264
GO:GO:0031901 GO:GO:0015031 GO:GO:0005768 GO:GO:0003924
EMBL:CH471054 GO:GO:0030100 GO:GO:0030139 PROSITE:PS51419
GO:GO:0007032 eggNOG:COG1100 GO:GO:0030742 GO:GO:0019003
HOVERGEN:HBG009351 EMBL:AC034102 OrthoDB:EOG4Z0B6M CTD:5869
KO:K07888 EMBL:X54871 EMBL:AF498937 EMBL:AK292597 EMBL:AK296517
EMBL:BX537408 EMBL:BC032740 EMBL:BC040143 EMBL:BC050558
EMBL:BC056422 EMBL:BC065298 IPI:IPI00017344 PIR:A43925
RefSeq:NP_001238965.1 RefSeq:NP_001238966.1 RefSeq:NP_002859.1
UniGene:Hs.157659 PDB:2HEI PDBsum:2HEI ProteinModelPortal:P61020
SMR:P61020 IntAct:P61020 STRING:P61020 PhosphoSite:P61020
DMDM:46577637 PaxDb:P61020 PRIDE:P61020 DNASU:5869
Ensembl:ENST00000360299 Ensembl:ENST00000448789
Ensembl:ENST00000553116 GeneID:5869 KEGG:hsa:5869 UCSC:uc001siv.3
GeneCards:GC12P056368 HGNC:HGNC:9784 HPA:CAB010224 MIM:179514
neXtProt:NX_P61020 PharmGKB:PA34144 InParanoid:P61020 OMA:GTQGKIC
PhylomeDB:P61020 ChiTaRS:RAB5B EvolutionaryTrace:P61020
GenomeRNAi:5869 NextBio:22794 ArrayExpress:P61020 Bgee:P61020
CleanEx:HS_RAB5B Genevestigator:P61020 Uniprot:P61020
Length = 215
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 59/164 (35%), Positives = 90/164 (54%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV++G+ GK++ V R + G+F + E TIG + ++F WDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQE 80
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKN- 131
++ L YY Q AI+++D+T + T+ TW ++L R +I I L GNK D+ N
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANK 140
Query: 132 RQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARKLAGS 174
R V+ ++ + N L + E SAK+ N FL +A+KL S
Sbjct: 141 RMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKS 184
>UNIPROTKB|Q5RBG1 [details] [associations]
symbol:RAB5B "Ras-related protein Rab-5B" species:9601
"Pongo abelii" [GO:0019003 "GDP binding" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0042470 GO:GO:0007264
GO:GO:0031901 GO:GO:0015031 GO:GO:0030100 GO:GO:0030139
PROSITE:PS51419 GO:GO:0007032 GO:GO:0019003 HOVERGEN:HBG009351
HSSP:P20339 CTD:5869 KO:K07888 OMA:GTQGKIC EMBL:CR858688
RefSeq:NP_001125512.1 UniGene:Pab.4552 ProteinModelPortal:Q5RBG1
SMR:Q5RBG1 PRIDE:Q5RBG1 GeneID:100172422 KEGG:pon:100172422
InParanoid:Q5RBG1 Uniprot:Q5RBG1
Length = 215
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 59/164 (35%), Positives = 90/164 (54%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV++G+ GK++ V R + G+F + E TIG + ++F WDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQE 80
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKN- 131
++ L YY Q AI+++D+T + T+ TW ++L R +I I L GNK D+ N
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANK 140
Query: 132 RQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARKLAGS 174
R V+ ++ + N L + E SAK+ N FL +A+KL S
Sbjct: 141 RMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKS 184
>MGI|MGI:105938 [details] [associations]
symbol:Rab5b "RAB5B, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=TAS]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005768 "endosome"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=TAS] [GO:0006810
"transport" evidence=IEA] [GO:0007032 "endosome organization"
evidence=IDA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0019003 "GDP
binding" evidence=ISO] [GO:0030100 "regulation of endocytosis"
evidence=IDA] [GO:0030139 "endocytic vesicle" evidence=IDA]
[GO:0030742 "GTP-dependent protein binding" evidence=ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:105938
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0042470
GO:GO:0007264 GO:GO:0031901 GO:GO:0015031 GO:GO:0003924
GO:GO:0030100 GO:GO:0030139 PROSITE:PS51419 GO:GO:0007032
eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
GeneTree:ENSGT00640000091139 OrthoDB:EOG4Z0B6M CTD:5869 KO:K07888
OMA:GTQGKIC EMBL:X84239 EMBL:AK081251 EMBL:M79311 IPI:IPI00116563
PIR:JH0640 PIR:S65932 RefSeq:NP_803130.1 UniGene:Mm.12815
UniGene:Mm.471965 UniGene:Mm.490984 ProteinModelPortal:P61021
SMR:P61021 STRING:P61021 PhosphoSite:P61021 PaxDb:P61021
PRIDE:P61021 Ensembl:ENSMUST00000000727 GeneID:19344 KEGG:mmu:19344
InParanoid:P61021 NextBio:296355 Bgee:P61021 CleanEx:MM_RAB5B
Genevestigator:P61021 GermOnline:ENSMUSG00000000711
GermOnline:ENSMUSG00000074931 Uniprot:P61021
Length = 215
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 59/164 (35%), Positives = 90/164 (54%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV++G+ GK++ V R + G+F + E TIG + ++F WDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQE 80
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKN- 131
++ L YY Q AI+++D+T + T+ TW ++L R +I I L GNK D+ N
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANK 140
Query: 132 RQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARKLAGS 174
R V+ ++ + N L + E SAK+ N FL +A+KL S
Sbjct: 141 RMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKS 184
>ZFIN|ZDB-GENE-040426-2593 [details] [associations]
symbol:rab5b "RAB5B, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040426-2593 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00640000091139 CTD:5869
KO:K07888 HSSP:P61586 EMBL:BX511265 EMBL:BC066634 IPI:IPI00867975
RefSeq:NP_998050.1 UniGene:Dr.38267 SMR:Q6NYD6 STRING:Q6NYD6
Ensembl:ENSDART00000021065 GeneID:405821 KEGG:dre:405821
InParanoid:Q6NYD6 OMA:KKMPKTD NextBio:20817785 Uniprot:Q6NYD6
Length = 214
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 59/166 (35%), Positives = 93/166 (56%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV++GD GK++ V R + G+F++ E TIG + ++F WDTAGQE
Sbjct: 21 FKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQE 80
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKNR 132
++ L YY Q AI++FD+T T++ W ++L R NI I L GNK D+ ++
Sbjct: 81 RYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQRQASPNIVIALAGNKADLADK 140
Query: 133 Q-VKAKQV-TFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGSTD 176
+ V+ ++ T+ L + E SAK+ N + FL +A+K+ TD
Sbjct: 141 RLVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAKKMP-KTD 185
>UNIPROTKB|F1RZV2 [details] [associations]
symbol:RAB23 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045861 "negative regulation of proteolysis"
evidence=IEA] [GO:0042733 "embryonic digit morphogenesis"
evidence=IEA] [GO:0021513 "spinal cord dorsal/ventral patterning"
evidence=IEA] [GO:0008589 "regulation of smoothened signaling
pathway" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0045861
GO:GO:0042733 GO:GO:0008589 GeneTree:ENSGT00700000104457 KO:K06234
OMA:VTEVFKY GO:GO:0021513 EMBL:CT998546 EMBL:CT963091
RefSeq:XP_001929671.1 UniGene:Ssc.82033 Ensembl:ENSSSCT00000026804
GeneID:100155623 KEGG:ssc:100155623 Uniprot:F1RZV2
Length = 237
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 51/160 (31%), Positives = 87/160 (54%)
Query: 13 SFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQ 72
+ K+V+VG+G GK++ ++R+ G F K Y+ TIGV+ + +R WDTAGQ
Sbjct: 9 AIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVHDEDVRLMLWDTAGQ 68
Query: 73 EKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNR 132
E+F + YY Q +++F T R +++ + +W + ++P VL NK+D+ +
Sbjct: 69 EEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEVGDVPTVLVQNKIDLLDD 128
Query: 133 Q-VKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARK 170
+K ++ KK L++Y S K + N + F YLA K
Sbjct: 129 SCIKNEEAEALAKKLKLRFYRTSVKEDLNVNEVFKYLAEK 168
>UNIPROTKB|P24408 [details] [associations]
symbol:RAB9A "Ras-related protein Rab-9A" species:9615
"Canis lupus familiaris" [GO:0005515 "protein binding"
evidence=IPI] [GO:0045335 "phagocytic vesicle" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0019003 "GDP binding"
evidence=ISS] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0030670 "phagocytic vesicle membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005770 "late endosome"
evidence=IEA] [GO:0045921 "positive regulation of exocytosis"
evidence=IEA] [GO:0005764 "lysosome" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 GO:GO:0005764
GO:GO:0005770 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
GO:GO:0045921 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104345 EMBL:X56386 PIR:S36187
RefSeq:NP_001183960.1 UniGene:Cfa.316 PDB:1S8F PDBsum:1S8F
ProteinModelPortal:P24408 SMR:P24408 IntAct:P24408 STRING:P24408
PRIDE:P24408 Ensembl:ENSCAFT00000018660 GeneID:403947
KEGG:cfa:403947 CTD:9367 InParanoid:P24408 KO:K07899 OMA:LIPTDTV
OrthoDB:EOG4R7VBS EvolutionaryTrace:P24408 NextBio:20817437
Uniprot:P24408
Length = 201
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 53/170 (31%), Positives = 88/170 (51%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FK++++GDGG GK++ + R++T +F+ + TIGVE D + + WDTAGQE
Sbjct: 8 FKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQE 67
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVD 128
+F LR +Y C ++ F V +++N+ W ++ E+ P V+ GNK+D
Sbjct: 68 RFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKID 127
Query: 129 VKNRQVKAKQVTFHRKKN--LQYYEISAKSNYNFEKPFLYLARKLAGSTD 176
+ RQV ++ + N Y+E SAK N F R++ + D
Sbjct: 128 ISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATED 177
>UNIPROTKB|P51151 [details] [associations]
symbol:RAB9A "Ras-related protein Rab-9A" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0030670 "phagocytic
vesicle membrane" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0019003 "GDP binding" evidence=IDA] [GO:0005525 "GTP binding"
evidence=IDA] [GO:0045921 "positive regulation of exocytosis"
evidence=IMP] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0005764 "lysosome" evidence=IDA] [GO:0005770 "late endosome"
evidence=IDA] [GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0000139
GO:GO:0005789 GO:GO:0015031 GO:GO:0003924 GO:GO:0005764
GO:GO:0005770 EMBL:CH471074 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0019003 GO:GO:0045921 HOVERGEN:HBG009351 HOGENOM:HOG000233968
CTD:9367 KO:K07899 OMA:LIPTDTV OrthoDB:EOG4R7VBS EMBL:U44103
EMBL:AF498944 EMBL:CR450362 EMBL:AK290505 EMBL:BC017265
IPI:IPI00016372 PIR:G02361 RefSeq:NP_001182257.1 RefSeq:NP_004242.1
UniGene:Hs.495704 PDB:1WMS PDBsum:1WMS ProteinModelPortal:P51151
SMR:P51151 DIP:DIP-46409N STRING:P51151 PhosphoSite:P51151
DMDM:1710003 PaxDb:P51151 PeptideAtlas:P51151 PRIDE:P51151
DNASU:9367 Ensembl:ENST00000464506 GeneID:9367 KEGG:hsa:9367
UCSC:uc004cvm.3 GeneCards:GC0XP013707 HGNC:HGNC:9792 HPA:CAB016411
HPA:HPA003094 MIM:300284 neXtProt:NX_P51151 PharmGKB:PA34152
InParanoid:P51151 PhylomeDB:P51151 ChEMBL:CHEMBL1293294
EvolutionaryTrace:P51151 GenomeRNAi:9367 NextBio:35080 Bgee:P51151
CleanEx:HS_RAB9A Genevestigator:P51151 GermOnline:ENSG00000123595
Uniprot:P51151
Length = 201
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 53/170 (31%), Positives = 88/170 (51%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FK++++GDGG GK++ + R++T +F+ + TIGVE D + + WDTAGQE
Sbjct: 8 FKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQE 67
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVD 128
+F LR +Y C ++ F V +++N+ W ++ E+ P V+ GNK+D
Sbjct: 68 RFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKID 127
Query: 129 VKNRQVKAKQVTFHRKKN--LQYYEISAKSNYNFEKPFLYLARKLAGSTD 176
+ RQV ++ + N Y+E SAK N F R++ + D
Sbjct: 128 ISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATED 177
>MGI|MGI:103292 [details] [associations]
symbol:Rab19 "RAB19, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:103292
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00700000104044 CTD:401409
OMA:RNSLHLY OrthoDB:EOG4WQ13N EMBL:X80473 EMBL:AB232613
EMBL:BC032936 EMBL:M79309 IPI:IPI00116775 PIR:JH0649 PIR:PC4012
RefSeq:NP_035356.1 UniGene:Mm.123866 ProteinModelPortal:P35294
SMR:P35294 PhosphoSite:P35294 PRIDE:P35294
Ensembl:ENSMUST00000031986 GeneID:19331 KEGG:mmu:19331
UCSC:uc009blp.1 InParanoid:P35294 NextBio:296311 Bgee:P35294
CleanEx:MM_RAB19 Genevestigator:P35294
GermOnline:ENSMUSG00000029923 Uniprot:P35294
Length = 217
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 57/171 (33%), Positives = 95/171 (55%)
Query: 5 SQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRF 64
S + VDY FK++++GD GKT V+ +G + + + TIGV+ + K++
Sbjct: 10 SDENVDY-LFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEIDGKKVKM 68
Query: 65 YCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV-CENIPIVLC 123
WDTAGQE+F + YY AII +D+T R T+++VP W ++ + N+ I+L
Sbjct: 69 QVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLI 128
Query: 124 GNKVDV-KNRQVKAKQVTFHRKKN--LQYYEISAKSNYNFEKPFLYLARKL 171
GNK D+ + R V + +K+ L E SAK + N ++ F+ +A++L
Sbjct: 129 GNKSDLWEKRHVLFEDACTLAEKHGLLAVLETSAKESRNIDEVFVLMAKEL 179
>TAIR|locus:2164905 [details] [associations]
symbol:RABG1 "RAB GTPase homolog G1" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0007264 GO:GO:0015031
PROSITE:PS51419 eggNOG:COG1100 EMBL:AB012243 KO:K07976
HOGENOM:HOG000233968 HSSP:P32939 EMBL:AB071853 IPI:IPI00545888
RefSeq:NP_568566.1 UniGene:At.26413 ProteinModelPortal:Q948K6
SMR:Q948K6 PRIDE:Q948K6 EnsemblPlants:AT5G39620.1 GeneID:833958
KEGG:ath:AT5G39620 TAIR:At5g39620 InParanoid:Q948K6 OMA:FVLMGNK
PhylomeDB:Q948K6 Genevestigator:Q948K6 Uniprot:Q948K6
Length = 204
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 54/166 (32%), Positives = 91/166 (54%)
Query: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEK 74
K++++GD G GKT+ +KR+ +F++ + TI V++ + ++ WDTAGQE+
Sbjct: 7 KIILLGDSGVGKTSLLKRYNDKDFKQLHNSTIYVDLVTKEICIAERQVILQIWDTAGQER 66
Query: 75 FGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-----NIPIVLCGNKVDV 129
F L +Y C ++++DV T++++ WH + + P VL GNK DV
Sbjct: 67 FKSLPSRFYRDTDCCVLVYDVNTLKTFESIDNWHDEFIKQANPETPTKFPFVLMGNKTDV 126
Query: 130 KNRQ--VKAKQVTFH---RKKNLQYYEISAKSNYNFEKPFLYLARK 170
N + V AK++ K N+ Y+E SAK+ N E+ FL +A+K
Sbjct: 127 NNGKPRVVAKEIADQWCGSKGNIVYFETSAKAKINVEEAFLEIAKK 172
>GENEDB_PFALCIPARUM|PFL1500w [details] [associations]
symbol:Rab2 "Rab2, GTPase" species:5833
"Plasmodium falciparum" [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0016787
EMBL:AE014188 KO:K07976 GenomeReviews:AE014188_GR
HOGENOM:HOG000233968 HSSP:P07560 OMA:RRDTFTH RefSeq:XP_001350706.1
ProteinModelPortal:Q8I5A9 SMR:Q8I5A9 PRIDE:Q8I5A9
EnsemblProtists:PFL1500w:mRNA GeneID:811352 KEGG:pfa:PFL1500w
EuPathDB:PlasmoDB:PF3D7_1231100 ProtClustDB:CLSZ2432247
Uniprot:Q8I5A9
Length = 213
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 58/161 (36%), Positives = 89/161 (55%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FK +I+GD G GK+ + + F ++ TIGVE + +I+ WDTAGQE
Sbjct: 8 FKYIIIGDTGVGKSCLLLQFTDKRFRADHDLTIGVEFGARLINLDNKQIKLQIWDTAGQE 67
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCEN--IPIVLCGNKVDVKN 131
F + YY A++++D+T R T+ ++ W D R N + I+L GNK D++
Sbjct: 68 SFRSITRSYYRGAAGALLVYDITRRETFNHLNRW-LDEVRQNSNPHMAIILVGNKCDLER 126
Query: 132 RQVKAKQ-VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
R+V A++ F R+ L + E SAK+ N E+ FLY ARK+
Sbjct: 127 REVSAEEGAQFARQNGLIFLETSAKTAKNVEEAFLYTARKI 167
>MGI|MGI:99833 [details] [associations]
symbol:Rab23 "RAB23, member RAS oncogene family" species:10090
"Mus musculus" [GO:0000045 "autophagic vacuole assembly"
evidence=ISO] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=ISO] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005776 "autophagic vacuole" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0006968
"cellular defense response" evidence=ISO] [GO:0007165 "signal
transduction" evidence=IMP] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IMP] [GO:0008589 "regulation of smoothened
signaling pathway" evidence=IGI] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0021513
"spinal cord dorsal/ventral patterning" evidence=IGI;IMP]
[GO:0042733 "embryonic digit morphogenesis" evidence=IMP]
[GO:0042992 "negative regulation of transcription factor import
into nucleus" evidence=ISO] [GO:0045335 "phagocytic vesicle"
evidence=ISO] [GO:0045861 "negative regulation of proteolysis"
evidence=IMP] [GO:0097094 "craniofacial suture morphogenesis"
evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:99833 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007165 GO:GO:0007264 GO:GO:0015031 GO:GO:0003924
GO:GO:0005776 GO:GO:0000045 GO:GO:0045861 GO:GO:0006968
GO:GO:0010008 GO:GO:0001843 PROSITE:PS51419 GO:GO:0042733
eggNOG:COG1100 GO:GO:0021904 GO:GO:0008589 GO:GO:0042992
GO:GO:0097094 HOGENOM:HOG000233968 HOVERGEN:HBG100144
OrthoDB:EOG4P2Q33 GO:GO:0021513 EMBL:Z22821 EMBL:BC025578
EMBL:M79305 IPI:IPI00116734 PIR:I48729 PIR:JH0645 UniGene:Mm.86744
PDB:1Z22 PDB:1Z2A PDBsum:1Z22 PDBsum:1Z2A ProteinModelPortal:P35288
SMR:P35288 STRING:P35288 PaxDb:P35288 PRIDE:P35288
InParanoid:P35288 EvolutionaryTrace:P35288 CleanEx:MM_RAB23
Genevestigator:P35288 GermOnline:ENSMUSG00000004768 Uniprot:P35288
Length = 237
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 51/160 (31%), Positives = 86/160 (53%)
Query: 13 SFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQ 72
+ K+V+VG+G GK++ ++R+ G F K Y+ TIGV+ N +R WDTAGQ
Sbjct: 9 AIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQ 68
Query: 73 EKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNR 132
E+F + YY Q +++F T R +++ + +W + +IP L NK+D+ +
Sbjct: 69 EEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEVGDIPTALVQNKIDLLDD 128
Query: 133 Q-VKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARK 170
+K ++ K+ L++Y S K + N + F YLA K
Sbjct: 129 SCIKNEEAEGLAKRLKLRFYRTSVKEDLNVSEVFKYLAEK 168
>RGD|1306867 [details] [associations]
symbol:Rab23 "RAB23, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0000045 "autophagic vacuole assembly"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=ISO]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005776 "autophagic vacuole" evidence=ISO]
[GO:0006184 "GTP catabolic process" evidence=ISO] [GO:0006968
"cellular defense response" evidence=ISO] [GO:0007165 "signal
transduction" evidence=ISO] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0007399 "nervous system
development" evidence=ISO] [GO:0008589 "regulation of smoothened
signaling pathway" evidence=IEA;ISO] [GO:0015031 "protein
transport" evidence=IEA] [GO:0021513 "spinal cord dorsal/ventral
patterning" evidence=IEA;ISO] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA;ISO] [GO:0042992 "negative regulation
of transcription factor import into nucleus" evidence=ISO]
[GO:0045335 "phagocytic vesicle" evidence=ISO] [GO:0045861
"negative regulation of proteolysis" evidence=IEA;ISO] [GO:0097094
"craniofacial suture morphogenesis" evidence=ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:1306867 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0045861
GO:GO:0042733 GO:GO:0008589 EMBL:CH473965
GeneTree:ENSGT00700000104457 CTD:51715 KO:K06234 OMA:VTEVFKY
OrthoDB:EOG4P2Q33 GO:GO:0021513 IPI:IPI00193952
RefSeq:NP_001102475.1 UniGene:Rn.224887 Ensembl:ENSRNOT00000016933
GeneID:367242 KEGG:rno:367242 UCSC:RGD:1306867 NextBio:690945
Uniprot:D3ZRM5
Length = 237
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 51/160 (31%), Positives = 86/160 (53%)
Query: 13 SFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQ 72
+ K+V+VG+G GK++ ++R+ G F K Y+ TIGV+ N +R WDTAGQ
Sbjct: 9 AIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQ 68
Query: 73 EKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNR 132
E+F + YY Q +++F T R +++ + +W + +IP L NK+D+ +
Sbjct: 69 EEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEVGDIPTALVQNKIDLLDD 128
Query: 133 Q-VKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARK 170
+K ++ K+ L++Y S K + N + F YLA K
Sbjct: 129 SCIKNEEAEGLAKRLKLRFYRTSVKEDLNVNEVFKYLAEK 168
>ZFIN|ZDB-GENE-040718-304 [details] [associations]
symbol:rab10 "RAB10, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040718-304 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6 CTD:10890
KO:K07903 OMA:WKSKCCS GeneTree:ENSGT00700000104031
EMBL:CABZ01076797 EMBL:CABZ01076798 EMBL:CABZ01076799 EMBL:BC076234
IPI:IPI00486247 RefSeq:NP_001002566.1 UniGene:Dr.33795 SMR:Q6DGV5
STRING:Q6DGV5 Ensembl:ENSDART00000067776 GeneID:436839
KEGG:dre:436839 InParanoid:Q6DGV5 NextBio:20831271 Uniprot:Q6DGV5
Length = 201
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 56/174 (32%), Positives = 96/174 (55%)
Query: 5 SQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRF 64
+++T D FKL+++GD G GKT + R F + TIG++ KI+
Sbjct: 2 AKKTYDL-LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 65 YCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLC 123
WDTAGQE+F + YY ++++D+T +++N+ W R++ E++ +L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLL 120
Query: 124 GNKVDVKNRQV--KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGST 175
GNK D+++++V KAK ++ ++++E SAK+N N EK FL LA + T
Sbjct: 121 GNKCDMEDKRVVPKAKGEQIAKEHGIRFFETSAKANINIEKAFLTLAEDILKKT 174
>ZFIN|ZDB-GENE-050522-328 [details] [associations]
symbol:rab23 "RAB23, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-050522-328 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 CTD:51715
HOVERGEN:HBG100144 KO:K06234 EMBL:BC095213 IPI:IPI00512473
RefSeq:NP_001018579.1 UniGene:Dr.39367 ProteinModelPortal:Q503R5
SMR:Q503R5 GeneID:553778 KEGG:dre:553778 InParanoid:Q503R5
NextBio:20880499 Uniprot:Q503R5
Length = 237
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 53/160 (33%), Positives = 87/160 (54%)
Query: 13 SFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQ 72
+ K+V+VG+G GK++ ++R+ G F K Y+ TIGV+ N +R WDTAGQ
Sbjct: 9 AIKVVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIIVNGEDVRLMLWDTAGQ 68
Query: 73 EKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNR 132
E+F + YY Q +++F T R +++ + +W + +IP VL NK+D+ +
Sbjct: 69 EEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWKEKVEMEVGDIPTVLVQNKIDLLDD 128
Query: 133 QV-KAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARK 170
V K ++ K+ L++Y S K + N + F YLA K
Sbjct: 129 TVIKNEEAEGLAKRLKLRFYRTSVKEDLNVNEVFKYLADK 168
>UNIPROTKB|Q5F3R8 [details] [associations]
symbol:RAB11B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264 GO:GO:0015031
GO:GO:0003924 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00690000101664 OrthoDB:EOG4RR6J7
CTD:9230 KO:K07905 OMA:ERSAHDE EMBL:AADN02063526 EMBL:AJ851582
IPI:IPI00573563 RefSeq:NP_001012569.1 UniGene:Gga.1828 SMR:Q5F3R8
STRING:Q5F3R8 Ensembl:ENSGALT00000000866 GeneID:420063
KEGG:gga:420063 InParanoid:Q5F3R8 NextBio:20823028 Uniprot:Q5F3R8
Length = 218
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 57/158 (36%), Positives = 86/158 (54%)
Query: 10 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 69
DY FK+V++GD G GK+ + R EF + + TIGVE + I+ WDT
Sbjct: 9 DY-LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 70 AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCEN-IPIVLCGNKVD 128
AGQE++ + YY A++++D+ LTY+NV W ++L +N I I+L GNK D
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSD 127
Query: 129 VKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 164
+++ R V + F K NL + E SA + N E+ F
Sbjct: 128 LRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAF 165
>UNIPROTKB|Q5ZMI5 [details] [associations]
symbol:RAB9A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005764 "lysosome" evidence=IEA]
[GO:0005770 "late endosome" evidence=IEA] [GO:0019003 "GDP binding"
evidence=IEA] [GO:0045921 "positive regulation of exocytosis"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0003924 GO:GO:0005764 GO:GO:0005770 eggNOG:COG1100
GO:GO:0019003 GO:GO:0045921 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104345 CTD:9367 KO:K07899 OMA:LIPTDTV
OrthoDB:EOG4R7VBS EMBL:AADN02011353 EMBL:AJ719399 IPI:IPI00575306
RefSeq:NP_001008678.1 UniGene:Gga.21374 SMR:Q5ZMI5
Ensembl:ENSGALT00000026762 GeneID:418635 KEGG:gga:418635
InParanoid:Q5ZMI5 NextBio:20821791 Uniprot:Q5ZMI5
Length = 201
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 54/169 (31%), Positives = 86/169 (50%)
Query: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEK 74
K++++GDGG GK++ + R++T +F+ + TIGVE D + + WDTAGQE+
Sbjct: 9 KVILLGDGGVGKSSLMNRYVTNKFDAQLFHTIGVEFLNKDLEVDGHFVTLQIWDTAGQER 68
Query: 75 FGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVDV 129
F LR +Y C ++ F V +++N+ W ++ E+ P V+ GNKVD+
Sbjct: 69 FRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKVDI 128
Query: 130 KNRQVKAKQVT--FHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGSTD 176
RQV ++ N Y+E SAK N F R++ S D
Sbjct: 129 NERQVSTEEAQDWCRNNGNHPYFETSAKDATNVAAAFEEAVRRVLASED 177
>UNIPROTKB|F1MNI4 [details] [associations]
symbol:RAB5B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030742 "GTP-dependent protein binding" evidence=IEA]
[GO:0030139 "endocytic vesicle" evidence=IEA] [GO:0030100
"regulation of endocytosis" evidence=IEA] [GO:0007032 "endosome
organization" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0005768 GO:GO:0030100 GO:GO:0030139 GO:GO:0007032
GeneTree:ENSGT00640000091139 OMA:GTQGKIC EMBL:DAAA02013536
IPI:IPI00691250 ProteinModelPortal:F1MNI4
Ensembl:ENSBTAT00000018777 Uniprot:F1MNI4
Length = 229
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 61/166 (36%), Positives = 92/166 (55%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPL--DFFTNCGKIRFYCWDTAG 71
FKLV++G+ GK++ V R + G+F + E TIGV L + ++F WDTAG
Sbjct: 33 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGVIAAFLTQSVCLDDTTVKFEIWDTAG 92
Query: 72 QEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVK 130
QE++ L YY Q AI+++D+T + T+ TW ++L R +I I L GNK D+
Sbjct: 93 QERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLA 152
Query: 131 N-RQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARKLAGS 174
N R V+ ++ + N L + E SAK+ N FL +A+KL S
Sbjct: 153 NKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKS 198
>UNIPROTKB|Q3MHP2 [details] [associations]
symbol:RAB11B "Ras-related protein Rab-11B" species:9913
"Bos taurus" [GO:0045335 "phagocytic vesicle" evidence=ISS]
[GO:0055037 "recycling endosome" evidence=ISS] [GO:0032402
"melanosome transport" evidence=ISS] [GO:0005525 "GTP binding"
evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS] [GO:0003924
"GTPase activity" evidence=ISS] [GO:0030670 "phagocytic vesicle
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 GO:GO:0055037
GO:GO:0007049 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
GO:GO:0032402 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101664 OrthoDB:EOG4RR6J7 EMBL:BC105162
IPI:IPI00718152 RefSeq:NP_001030468.1 UniGene:Bt.4347
ProteinModelPortal:Q3MHP2 SMR:Q3MHP2 STRING:Q3MHP2 PRIDE:Q3MHP2
Ensembl:ENSBTAT00000003206 GeneID:532723 KEGG:bta:532723 CTD:9230
InParanoid:Q3MHP2 KO:K07905 OMA:ERSAHDE NextBio:20875786
Uniprot:Q3MHP2
Length = 218
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 57/158 (36%), Positives = 86/158 (54%)
Query: 10 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 69
DY FK+V++GD G GK+ + R EF + + TIGVE + I+ WDT
Sbjct: 9 DY-LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 70 AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVD 128
AGQE++ + YY A++++D+ LTY+NV W ++L + NI I+L GNK D
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 127
Query: 129 VKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 164
+++ R V + F K NL + E SA + N E+ F
Sbjct: 128 LRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAF 165
>UNIPROTKB|J9JHN1 [details] [associations]
symbol:RAB11B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00690000101664 CTD:9230 KO:K07905 OMA:ERSAHDE
EMBL:AAEX03012474 EMBL:AAEX03012473 RefSeq:XP_854399.2
ProteinModelPortal:J9JHN1 Ensembl:ENSCAFT00000048184 GeneID:611619
KEGG:cfa:611619 Uniprot:J9JHN1
Length = 218
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 57/158 (36%), Positives = 86/158 (54%)
Query: 10 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 69
DY FK+V++GD G GK+ + R EF + + TIGVE + I+ WDT
Sbjct: 9 DY-LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 70 AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVD 128
AGQE++ + YY A++++D+ LTY+NV W ++L + NI I+L GNK D
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 127
Query: 129 VKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 164
+++ R V + F K NL + E SA + N E+ F
Sbjct: 128 LRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAF 165
>UNIPROTKB|B4DMK0 [details] [associations]
symbol:RAB11B "cDNA FLJ61134, highly similar to Ras-related
protein Rab-11B" species:9606 "Homo sapiens" [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
HOVERGEN:HBG009351 HOGENOM:HOG000233968 UniGene:Hs.626404
EMBL:AK297498 IPI:IPI01022454 ProteinModelPortal:B4DMK0 SMR:B4DMK0
STRING:B4DMK0 PRIDE:B4DMK0 Uniprot:B4DMK0
Length = 179
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 57/158 (36%), Positives = 86/158 (54%)
Query: 10 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 69
DY FK+V++GD G GK+ + R EF + + TIGVE + I+ WDT
Sbjct: 9 DY-LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 70 AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVD 128
AGQE++ + YY A++++D+ LTY+NV W ++L + NI I+L GNK D
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 127
Query: 129 VKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 164
+++ R V + F K NL + E SA + N E+ F
Sbjct: 128 LRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAF 165
>UNIPROTKB|Q15907 [details] [associations]
symbol:RAB11B "Ras-related protein Rab-11B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IDA] [GO:0005525
"GTP binding" evidence=IDA] [GO:0003924 "GTPase activity"
evidence=IDA] [GO:0032402 "melanosome transport" evidence=ISS]
[GO:0055037 "recycling endosome" evidence=ISS] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0006184 "GTP catabolic
process" evidence=IDA;TAS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 GO:GO:0016023
GO:GO:0055037 GO:GO:0007049 EMBL:CH471139 PROSITE:PS51419
eggNOG:COG1100 GO:GO:0019003 GO:GO:0032402 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OrthoDB:EOG4RR6J7 CTD:9230 KO:K07905
OMA:ERSAHDE EMBL:X79780 EMBL:AF498947 EMBL:AK312994 EMBL:BT019536
EMBL:BC110081 IPI:IPI00020436 PIR:JC2487 RefSeq:NP_004209.2
UniGene:Hs.626404 PDB:2F9L PDB:2F9M PDBsum:2F9L PDBsum:2F9M
ProteinModelPortal:Q15907 SMR:Q15907 IntAct:Q15907 STRING:Q15907
PhosphoSite:Q15907 DMDM:38258938 PaxDb:Q15907 PeptideAtlas:Q15907
PRIDE:Q15907 DNASU:9230 Ensembl:ENST00000328024 GeneID:9230
KEGG:hsa:9230 UCSC:uc002mju.4 GeneCards:GC19P008455 HGNC:HGNC:9761
MIM:604198 neXtProt:NX_Q15907 PharmGKB:PA34102 InParanoid:Q15907
PhylomeDB:Q15907 ChiTaRS:RAB11B EvolutionaryTrace:Q15907
GenomeRNAi:9230 NextBio:34597 Bgee:Q15907 CleanEx:HS_RAB11B
Genevestigator:Q15907 GermOnline:ENSG00000185236 Uniprot:Q15907
Length = 218
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 57/158 (36%), Positives = 86/158 (54%)
Query: 10 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 69
DY FK+V++GD G GK+ + R EF + + TIGVE + I+ WDT
Sbjct: 9 DY-LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 70 AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVD 128
AGQE++ + YY A++++D+ LTY+NV W ++L + NI I+L GNK D
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 127
Query: 129 VKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 164
+++ R V + F K NL + E SA + N E+ F
Sbjct: 128 LRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAF 165
>UNIPROTKB|F2Z5J9 [details] [associations]
symbol:RAB11B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019003 "GDP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264 GO:GO:0015031
GO:GO:0003924 GO:GO:0019003 GeneTree:ENSGT00690000101664 CTD:9230
KO:K07905 OMA:ERSAHDE EMBL:FP090904 RefSeq:NP_001231804.1
UniGene:Ssc.5570 ProteinModelPortal:F2Z5J9 SMR:F2Z5J9 PRIDE:F2Z5J9
Ensembl:ENSSSCT00000014854 GeneID:100513782 KEGG:ssc:100513782
Uniprot:F2Z5J9
Length = 218
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 57/158 (36%), Positives = 86/158 (54%)
Query: 10 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 69
DY FK+V++GD G GK+ + R EF + + TIGVE + I+ WDT
Sbjct: 9 DY-LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 70 AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVD 128
AGQE++ + YY A++++D+ LTY+NV W ++L + NI I+L GNK D
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 127
Query: 129 VKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 164
+++ R V + F K NL + E SA + N E+ F
Sbjct: 128 LRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAF 165
>UNIPROTKB|I3LFZ8 [details] [associations]
symbol:RAB5B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030742 "GTP-dependent protein binding" evidence=IEA]
[GO:0030139 "endocytic vesicle" evidence=IEA] [GO:0030100
"regulation of endocytosis" evidence=IEA] [GO:0007032 "endosome
organization" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0005768 GO:GO:0030100 GO:GO:0030139 GO:GO:0007032
GeneTree:ENSGT00640000091139 OMA:GTQGKIC Ensembl:ENSSSCT00000028386
Uniprot:I3LFZ8
Length = 229
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 61/166 (36%), Positives = 92/166 (55%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPL--DFFTNCGKIRFYCWDTAG 71
FKLV++G+ GK++ V R + G+F + E TIGV L + ++F WDTAG
Sbjct: 33 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGVIAAFLTQSVCLDDTTVKFEIWDTAG 92
Query: 72 QEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVK 130
QE++ L YY Q AI+++D+T + T+ TW ++L R +I I L GNK D+
Sbjct: 93 QERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLA 152
Query: 131 N-RQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARKLAGS 174
N R V+ ++ + N L + E SAK+ N FL +A+KL S
Sbjct: 153 NKRMVEYEEAQAYADDNTLLFMETSAKTAMNVNDLFLAIAKKLPKS 198
>UNIPROTKB|P22127 [details] [associations]
symbol:P22127 "Ras-related protein Rab-10" species:7785
"Discopyge ommata" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0005768 "endosome" evidence=ISS] [GO:0005789 "endoplasmic
reticulum membrane" evidence=ISS] [GO:0005794 "Golgi apparatus"
evidence=ISS] [GO:0005802 "trans-Golgi network" evidence=ISS]
[GO:0006893 "Golgi to plasma membrane transport" evidence=ISS]
[GO:0007409 "axonogenesis" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=ISS] [GO:0016197 "endosomal
transport" evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS]
[GO:0030859 "polarized epithelial cell differentiation"
evidence=ISS] [GO:0032593 "insulin-responsive compartment"
evidence=ISS] [GO:0032869 "cellular response to insulin stimulus"
evidence=ISS] [GO:0043001 "Golgi to plasma membrane protein
transport" evidence=ISS] [GO:0045200 "establishment of neuroblast
polarity" evidence=ISS] [GO:0055037 "recycling endosome"
evidence=ISS] [GO:0061467 "basolateral protein localization"
evidence=ISS] [GO:0071782 "endoplasmic reticulum tubular network"
evidence=ISS] [GO:0071786 "endoplasmic reticulum tubular network
organization" evidence=ISS] [GO:0072372 "primary cilium"
evidence=ISS] [GO:0072659 "protein localization to plasma membrane"
evidence=ISS] [GO:0097051 "establishment of protein localization to
endoplasmic reticulum membrane" evidence=ISS] [GO:0000145 "exocyst"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264 GO:GO:0030670
GO:GO:0032869 GO:GO:0016197 GO:GO:0055037 GO:GO:0007409
GO:GO:0005802 GO:GO:0072372 GO:GO:0072659 PROSITE:PS51419
GO:GO:0032593 GO:GO:0043001 GO:GO:0055038 GO:GO:0019003
HOVERGEN:HBG009351 GO:GO:0045200 GO:GO:0030859 EMBL:M38390
PIR:A38625 ProteinModelPortal:P22127 SMR:P22127 PRIDE:P22127
Uniprot:P22127
Length = 200
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 56/174 (32%), Positives = 97/174 (55%)
Query: 5 SQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRF 64
+++T D FKL+++GD G GKT + R F + TIG++ + KI+
Sbjct: 2 AKKTYDL-LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELHGKKIKL 60
Query: 65 YCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLC 123
WDTAGQE+F + YY ++++D+T +++N+ W R++ E++ +L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLL 120
Query: 124 GNKVDVKNRQV--KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGST 175
GNK D+++++V K+K R+ ++++E SAK+N N EK FL LA + T
Sbjct: 121 GNKCDMEDKRVVLKSKGEQIAREHAIRFFETSAKANINIEKAFLTLAEDILQKT 174
>MGI|MGI:99425 [details] [associations]
symbol:Rab11b "RAB11B, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016023
"cytoplasmic membrane-bounded vesicle" evidence=ISO] [GO:0019003
"GDP binding" evidence=ISO] [GO:0045335 "phagocytic vesicle"
evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:99425 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0005886 GO:GO:0007264 GO:GO:0003924 GO:GO:0016023
GO:GO:0007049 PROSITE:PS51419 GO:GO:0055038 eggNOG:COG1100
GO:GO:0019003 GO:GO:0032402 HOVERGEN:HBG009351 GO:GO:0033572
HOGENOM:HOG000233968 OrthoDB:EOG4RR6J7 CTD:9230 KO:K07905
OMA:ERSAHDE ChiTaRS:RAB11B EMBL:L26528 EMBL:BC054753 EMBL:BC085270
IPI:IPI00135869 PIR:A55005 RefSeq:NP_033023.1 UniGene:Mm.387587
ProteinModelPortal:P46638 SMR:P46638 IntAct:P46638 STRING:P46638
PhosphoSite:P46638 PaxDb:P46638 PRIDE:P46638
Ensembl:ENSMUST00000057373 GeneID:19326 KEGG:mmu:19326
InParanoid:P46638 NextBio:296291 Bgee:P46638 CleanEx:MM_RAB11B
Genevestigator:P46638 GermOnline:ENSMUSG00000002290 GO:GO:2001135
Uniprot:P46638
Length = 218
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 57/158 (36%), Positives = 86/158 (54%)
Query: 10 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 69
DY FK+V++GD G GK+ + R EF + + TIGVE + I+ WDT
Sbjct: 9 DY-LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 70 AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVD 128
AGQE++ + YY A++++D+ LTY+NV W ++L + NI I+L GNK D
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 127
Query: 129 VKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 164
+++ R V + F K NL + E SA + N E+ F
Sbjct: 128 LRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAF 165
>RGD|68369 [details] [associations]
symbol:Rab11b "RAB11B, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0003924 "GTPase activity" evidence=ISO;ISS]
[GO:0005525 "GTP binding" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006184 "GTP
catabolic process" evidence=ISO] [GO:0006928 "cellular component
movement" evidence=NAS] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IDA]
[GO:0019003 "GDP binding" evidence=ISO;ISS] [GO:0030670 "phagocytic
vesicle membrane" evidence=IEA] [GO:0032402 "melanosome transport"
evidence=ISS] [GO:0045335 "phagocytic vesicle" evidence=ISO;ISS]
[GO:0055037 "recycling endosome" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:68369 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
GO:GO:0003924 GO:GO:0006928 GO:GO:0016023 GO:GO:0055037
GO:GO:0007049 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
GO:GO:0032402 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101664 OrthoDB:EOG4RR6J7 CTD:9230 KO:K07905
OMA:ERSAHDE EMBL:D01046 EMBL:AF286534 EMBL:BC062041 IPI:IPI00210381
RefSeq:NP_116006.1 UniGene:Rn.124832 ProteinModelPortal:O35509
SMR:O35509 IntAct:O35509 STRING:O35509 PhosphoSite:O35509
PRIDE:O35509 Ensembl:ENSRNOT00000010197 GeneID:79434 KEGG:rno:79434
UCSC:RGD:68369 InParanoid:O35509 NextBio:614803
Genevestigator:O35509 GermOnline:ENSRNOG00000007648 Uniprot:O35509
Length = 218
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 57/158 (36%), Positives = 86/158 (54%)
Query: 10 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 69
DY FK+V++GD G GK+ + R EF + + TIGVE + I+ WDT
Sbjct: 9 DY-LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 70 AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVD 128
AGQE++ + YY A++++D+ LTY+NV W ++L + NI I+L GNK D
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 127
Query: 129 VKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 164
+++ R V + F K NL + E SA + N E+ F
Sbjct: 128 LRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAF 165
>WB|WBGene00008672 [details] [associations]
symbol:F11A5.4 species:6239 "Caenorhabditis elegans"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0019915 "lipid storage" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GO:GO:0019915 eggNOG:COG1100 KO:K07976
HOGENOM:HOG000233968 HSSP:P20339 GeneTree:ENSGT00690000101805
EMBL:Z92830 PIR:T20750 RefSeq:NP_507084.1 UniGene:Cel.4153
ProteinModelPortal:O17789 SMR:O17789 EnsemblMetazoa:F11A5.4
GeneID:184331 KEGG:cel:CELE_F11A5.4 UCSC:F11A5.4 CTD:184331
WormBase:F11A5.4 InParanoid:O17789 NextBio:924372 Uniprot:O17789
Length = 203
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 56/161 (34%), Positives = 97/161 (60%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FK VI+GD G GK+ + R + F+ + T+G+E + + K++ + WDT GQE
Sbjct: 7 FKYVIIGDRGVGKSNLLLRFIGKPFDSIHPSTLGIEFGFRNLEIDRKKVKLHVWDTCGQE 66
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVK-N 131
+F L YY H A++++D+T+R ++ ++ W DL R+ + +I IVL GNK D++ +
Sbjct: 67 RFRSLVGSYYRHAIGALLVYDITSRESFYHLEHWLTDLQRLGDPDIVIVLIGNKSDLEAD 126
Query: 132 RQVKAKQ-VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
R+V+ ++ F R+ L + EISAK+N E+ F+ A ++
Sbjct: 127 REVRKEEGEAFAREFGLIFMEISAKTNEYVEEAFVNSAHEI 167
>UNIPROTKB|Q5ZHW4 [details] [associations]
symbol:RAB5B "Ras-related protein Rab-5B" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0031901 "early endosome membrane"
evidence=IEA] [GO:0019003 "GDP binding" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0031901
GO:GO:0015031 PROSITE:PS51419 GO:GO:0019003 HOVERGEN:HBG009351
HSSP:P20339 EMBL:AJ721020 IPI:IPI00586484 RefSeq:NP_001186777.1
UniGene:Gga.17824 ProteinModelPortal:Q5ZHW4 SMR:Q5ZHW4 PRIDE:Q5ZHW4
GeneID:100529061 KEGG:gga:100529061 CTD:5869 KO:K07888
Uniprot:Q5ZHW4
Length = 215
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 58/164 (35%), Positives = 90/164 (54%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV++G+ GK++ V R + G+F + E TIG + ++F WDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQE 80
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKN- 131
++ L YY Q AI+++D+T + T+ TW ++L R +I I L GNK D+ +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLASK 140
Query: 132 RQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARKLAGS 174
R V+ ++ + N L + E SAK+ N FL +A+KL S
Sbjct: 141 RMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKS 184
>UNIPROTKB|A4D1S5 [details] [associations]
symbol:RAB19 "Ras-related protein Rab-19" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419 EMBL:CH236950
eggNOG:COG1100 HOVERGEN:HBG009351 EMBL:AC069335
HOGENOM:HOG000233968 CTD:401409 OMA:RNSLHLY EMBL:AC093087
EMBL:BC140796 EMBL:AF091033 IPI:IPI00478209 IPI:IPI00923598
RefSeq:NP_001008749.2 UniGene:Hs.583545 ProteinModelPortal:A4D1S5
SMR:A4D1S5 STRING:A4D1S5 PhosphoSite:A4D1S5 PRIDE:A4D1S5
Ensembl:ENST00000275874 Ensembl:ENST00000356407
Ensembl:ENST00000537763 GeneID:401409 KEGG:hsa:401409
UCSC:uc010lni.2 GeneCards:GC07P140103 HGNC:HGNC:19982 HPA:HPA051077
neXtProt:NX_A4D1S5 PharmGKB:PA162400617 GenomeRNAi:401409
NextBio:106817 ArrayExpress:A4D1S5 Bgee:A4D1S5 CleanEx:HS_RAB19
Genevestigator:A4D1S5 Uniprot:A4D1S5
Length = 217
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 60/176 (34%), Positives = 97/176 (55%)
Query: 2 ALPSQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVE--VHPLDFFTNC 59
A + + DY FK++++GD GKT V+ +G + + + TIGV+ V LD +
Sbjct: 7 ARAADENFDY-LFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDI--DG 63
Query: 60 GKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV-CENI 118
K++ WDTAGQE+F + YY AII +D+T R T++++P W ++ + N+
Sbjct: 64 KKVKMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANV 123
Query: 119 PIVLCGNKVDV-KNRQVKAKQV-TFHRKKNL-QYYEISAKSNYNFEKPFLYLARKL 171
I+L GNK D+ + R V + T K L E SAK + N E+ F+ +A++L
Sbjct: 124 VIMLIGNKCDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKEL 179
>UNIPROTKB|F1MSJ9 [details] [associations]
symbol:RAB35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045334 "clathrin-coated endocytic vesicle"
evidence=IEA] [GO:0045171 "intercellular bridge" evidence=IEA]
[GO:0031253 "cell projection membrane" evidence=IEA] [GO:0016197
"endosomal transport" evidence=IEA] [GO:0005905 "coated pit"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0015031 GO:GO:0005905 GO:GO:0016197 GO:GO:0000910
GO:GO:0005546 GO:GO:0045171 GO:GO:0045334 GO:GO:0031253
GeneTree:ENSGT00700000104049 OMA:NCDVVNR EMBL:DAAA02045445
IPI:IPI01028002 UniGene:Bt.26843 Ensembl:ENSBTAT00000029514
Uniprot:F1MSJ9
Length = 201
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 58/160 (36%), Positives = 86/160 (53%)
Query: 10 DYPS-FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWD 68
DY FKLVI+GD G GK++ + R F Y TIGV+ N K++ WD
Sbjct: 4 DYDHLFKLVIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWD 63
Query: 69 TAGQEKFGGLRDGYY--IHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNK 126
TAGQE+F + YY HG I+++DVT+ ++ NV W ++ + C+++ +L GNK
Sbjct: 64 TAGQERFRTITSTYYRGTHG--VIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNK 121
Query: 127 VDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPF 164
D R+V + F + +Q +E SAK N N E+ F
Sbjct: 122 NDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMF 161
>UNIPROTKB|J9PAQ4 [details] [associations]
symbol:RAB4B "Ras-related protein Rab-4B" species:9615
"Canis lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00690000101805 EMBL:AAEX03000940
Ensembl:ENSCAFT00000047873 Uniprot:J9PAQ4
Length = 224
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 55/173 (31%), Positives = 92/173 (53%)
Query: 7 QTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYC 66
+T D+ FK +++G GTGK+ + + + +F++ TIGVE ++
Sbjct: 15 ETYDF-LFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQI 73
Query: 67 WDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGN 125
WDTAGQE+F + YY A++++D+T+R TY ++ W D + NI ++LCGN
Sbjct: 74 WDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGN 133
Query: 126 KVDVK-NRQVKAKQVT-FHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGSTD 176
K D+ R+V + + F ++ L + E SA + N E+ FL AR + D
Sbjct: 134 KKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKID 186
>UNIPROTKB|P61017 [details] [associations]
symbol:RAB4B "Ras-related protein Rab-4B" species:9615
"Canis lupus familiaris" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 OrthoDB:EOG4WM4VM
EMBL:X56389 PIR:F36364 RefSeq:NP_001003275.1 UniGene:Cfa.3813
ProteinModelPortal:P61017 SMR:P61017 PRIDE:P61017 GeneID:403956
KEGG:cfa:403956 CTD:53916 InParanoid:P61017 KO:K07880
NextBio:20817446 Uniprot:P61017
Length = 213
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 55/173 (31%), Positives = 92/173 (53%)
Query: 7 QTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYC 66
+T D+ FK +++G GTGK+ + + + +F++ TIGVE ++
Sbjct: 3 ETYDF-LFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQI 61
Query: 67 WDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGN 125
WDTAGQE+F + YY A++++D+T+R TY ++ W D + NI ++LCGN
Sbjct: 62 WDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGN 121
Query: 126 KVDVK-NRQVKAKQVT-FHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGSTD 176
K D+ R+V + + F ++ L + E SA + N E+ FL AR + D
Sbjct: 122 KKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKID 174
>UNIPROTKB|P61018 [details] [associations]
symbol:RAB4B "Ras-related protein Rab-4B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0003924 "GTPase activity" evidence=NAS]
[GO:0016192 "vesicle-mediated transport" evidence=NAS] [GO:0005622
"intracellular" evidence=NAS] [GO:0006184 "GTP catabolic process"
evidence=NAS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0007264 GO:GO:0016192 GO:GO:0015031 GO:GO:0003924
GO:GO:0005622 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
UniGene:Hs.631539 UniGene:Hs.730737 GermOnline:ENSG00000167578
HOGENOM:HOG000233968 OrthoDB:EOG4WM4VM CTD:53916 KO:K07880
EMBL:AF087861 EMBL:AF165522 EMBL:AF217985 EMBL:AF498935
EMBL:BC046927 IPI:IPI00187143 IPI:IPI00477489 RefSeq:NP_057238.3
PDB:2O52 PDBsum:2O52 ProteinModelPortal:P61018 SMR:P61018
STRING:P61018 PhosphoSite:P61018 DMDM:46577635 PaxDb:P61018
PRIDE:P61018 DNASU:53916 Ensembl:ENST00000357052 GeneID:53916
KEGG:hsa:53916 UCSC:uc002opd.2 UCSC:uc002opf.2
GeneCards:GC19P041284 HGNC:HGNC:9782 MIM:612945 neXtProt:NX_P61018
PharmGKB:PA34142 InParanoid:P61018 OMA:SPNIVIL
EvolutionaryTrace:P61018 GenomeRNAi:53916 NextBio:56222
ArrayExpress:P61018 Bgee:P61018 CleanEx:HS_RAB4B
Genevestigator:P61018 Uniprot:P61018
Length = 213
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 55/173 (31%), Positives = 92/173 (53%)
Query: 7 QTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYC 66
+T D+ FK +++G GTGK+ + + + +F++ TIGVE ++
Sbjct: 3 ETYDF-LFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQI 61
Query: 67 WDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGN 125
WDTAGQE+F + YY A++++D+T+R TY ++ W D + NI ++LCGN
Sbjct: 62 WDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGN 121
Query: 126 KVDVK-NRQVKAKQVT-FHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGSTD 176
K D+ R+V + + F ++ L + E SA + N E+ FL AR + D
Sbjct: 122 KKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKID 174
>UNIPROTKB|F2Z507 [details] [associations]
symbol:RAB4B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00690000101805 KO:K07880 OMA:SPNIVIL
EMBL:FP325213 RefSeq:XP_003127192.1 RefSeq:XP_003481903.1
ProteinModelPortal:F2Z507 SMR:F2Z507 PRIDE:F2Z507
Ensembl:ENSSSCT00000003328 GeneID:100523381 KEGG:ssc:100523381
Uniprot:F2Z507
Length = 213
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 55/173 (31%), Positives = 92/173 (53%)
Query: 7 QTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYC 66
+T D+ FK +++G GTGK+ + + + +F++ TIGVE ++
Sbjct: 3 ETYDF-LFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQI 61
Query: 67 WDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGN 125
WDTAGQE+F + YY A++++D+T+R TY ++ W D + NI ++LCGN
Sbjct: 62 WDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGN 121
Query: 126 KVDVK-NRQVKAKQVT-FHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGSTD 176
K D+ R+V + + F ++ L + E SA + N E+ FL AR + D
Sbjct: 122 KKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKID 174
>MGI|MGI:105071 [details] [associations]
symbol:Rab4b "RAB4B, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:105071 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0005886 GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101805 OrthoDB:EOG4WM4VM CTD:53916 KO:K07880
OMA:SPNIVIL EMBL:AF408432 EMBL:AK005314 EMBL:BC007147
IPI:IPI00271059 RefSeq:NP_083667.1 UniGene:Mm.482114
ProteinModelPortal:Q91ZR1 SMR:Q91ZR1 STRING:Q91ZR1 PRIDE:Q91ZR1
Ensembl:ENSMUST00000093040 GeneID:19342 KEGG:mmu:19342
InParanoid:Q91ZR1 NextBio:296351 Bgee:Q91ZR1 Genevestigator:Q91ZR1
GermOnline:ENSMUSG00000053291 Uniprot:Q91ZR1
Length = 213
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 55/173 (31%), Positives = 92/173 (53%)
Query: 7 QTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYC 66
+T D+ FK +++G GTGK+ + + + +F++ TIGVE ++
Sbjct: 3 ETYDF-LFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQI 61
Query: 67 WDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGN 125
WDTAGQE+F + YY A++++D+T+R TY ++ W D + NI ++LCGN
Sbjct: 62 WDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGN 121
Query: 126 KVDVK-NRQVKAKQVT-FHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGSTD 176
K D+ R+V + + F ++ L + E SA + N E+ FL AR + D
Sbjct: 122 KKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKID 174
>RGD|3529 [details] [associations]
symbol:Rab4a "RAB4A, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0001671 "ATPase activator activity"
evidence=IDA] [GO:0003924 "GTPase activity" evidence=IEA;ISO;ISS;IDA]
[GO:0005525 "GTP binding" evidence=IEA;ISO;ISS;IDA;TAS] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005768 "endosome" evidence=IEA;ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=ISO;ISS;IDA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=IEA;ISO] [GO:0015031 "protein transport"
evidence=IEA;ISO] [GO:0016020 "membrane" evidence=IDA] [GO:0019003
"GDP binding" evidence=IEA;ISO;ISS] [GO:0019905 "syntaxin binding"
evidence=IPI] [GO:0030100 "regulation of endocytosis"
evidence=IEA;ISO] [GO:0032482 "Rab protein signal transduction"
evidence=IC;IMP] [GO:0032593 "insulin-responsive compartment"
evidence=IDA] [GO:0032781 "positive regulation of ATPase activity"
evidence=IDA] [GO:0035255 "ionotropic glutamate receptor binding"
evidence=IPI] [GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] [GO:0051117 "ATPase binding" evidence=IDA] [GO:0055037
"recycling endosome" evidence=IDA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:3529 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0005886 GO:GO:0008565 GO:GO:0003924 GO:GO:0055037 GO:GO:0030100
PROSITE:PS51419 GO:GO:0001671 GO:GO:0032593 GO:GO:0051117
eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GO:GO:0032482 CTD:5867 KO:K07879 EMBL:X06890 EMBL:BC062016
IPI:IPI00325763 PIR:S01766 RefSeq:NP_037151.2 UniGene:Rn.3016
ProteinModelPortal:P05714 SMR:P05714 STRING:P05714 PRIDE:P05714
Ensembl:ENSRNOT00000023771 GeneID:25532 KEGG:rno:25532 UCSC:RGD:3529
InParanoid:P05714 NextBio:607033 ArrayExpress:P05714
Genevestigator:P05714 GermOnline:ENSRNOG00000017467 Uniprot:P05714
Length = 218
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 57/169 (33%), Positives = 95/169 (56%)
Query: 7 QTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK-IRFY 65
+T D+ FK +++G+ GTGK+ + + + +F+ TIGVE GK ++
Sbjct: 8 ETYDF-LFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGS-KIINVGGKYVKLQ 65
Query: 66 CWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCG 124
WDTAGQE+F + YY A++++D+T+R TY + W D + +NI I+LCG
Sbjct: 66 IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCG 125
Query: 125 NKVDVK-NRQVKAKQVT-FHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
NK D+ +R+V + + F ++ L + E SA + N E+ F+ ARK+
Sbjct: 126 NKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFMQCARKI 174
>RGD|620931 [details] [associations]
symbol:Rab4b "RAB4B, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:620931 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0005886 GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101805 OrthoDB:EOG4WM4VM CTD:53916 KO:K07880
OMA:SPNIVIL EMBL:X78605 IPI:IPI00199224 PIR:S58279
RefSeq:NP_059051.1 UniGene:Rn.7181 ProteinModelPortal:P51146
SMR:P51146 STRING:P51146 PRIDE:P51146 Ensembl:ENSRNOT00000002052
GeneID:50866 KEGG:rno:50866 UCSC:RGD:620931 InParanoid:P51146
NextBio:610586 ArrayExpress:P51146 Genevestigator:P51146
GermOnline:ENSRNOG00000001500 Uniprot:P51146
Length = 213
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 55/173 (31%), Positives = 92/173 (53%)
Query: 7 QTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYC 66
+T D+ FK +++G GTGK+ + + + +F++ TIGVE ++
Sbjct: 3 ETYDF-LFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQI 61
Query: 67 WDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGN 125
WDTAGQE+F + YY A++++D+T+R TY ++ W D + NI ++LCGN
Sbjct: 62 WDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGN 121
Query: 126 KVDVK-NRQVKAKQVT-FHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGSTD 176
K D+ R+V + + F ++ L + E SA + N E+ FL AR + D
Sbjct: 122 KKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKID 174
>UNIPROTKB|P51146 [details] [associations]
symbol:Rab4b "Ras-related protein Rab-4B" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:620931 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0005886 GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101805 OrthoDB:EOG4WM4VM CTD:53916 KO:K07880
OMA:SPNIVIL EMBL:X78605 IPI:IPI00199224 PIR:S58279
RefSeq:NP_059051.1 UniGene:Rn.7181 ProteinModelPortal:P51146
SMR:P51146 STRING:P51146 PRIDE:P51146 Ensembl:ENSRNOT00000002052
GeneID:50866 KEGG:rno:50866 UCSC:RGD:620931 InParanoid:P51146
NextBio:610586 ArrayExpress:P51146 Genevestigator:P51146
GermOnline:ENSRNOG00000001500 Uniprot:P51146
Length = 213
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 55/173 (31%), Positives = 92/173 (53%)
Query: 7 QTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYC 66
+T D+ FK +++G GTGK+ + + + +F++ TIGVE ++
Sbjct: 3 ETYDF-LFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQI 61
Query: 67 WDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGN 125
WDTAGQE+F + YY A++++D+T+R TY ++ W D + NI ++LCGN
Sbjct: 62 WDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGN 121
Query: 126 KVDVK-NRQVKAKQVT-FHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGSTD 176
K D+ R+V + + F ++ L + E SA + N E+ FL AR + D
Sbjct: 122 KKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKID 174
>ZFIN|ZDB-GENE-031118-30 [details] [associations]
symbol:rab5c "RAB5C, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0001702
"gastrulation with mouth forming second" evidence=IMP] [GO:0016337
"cell-cell adhesion" evidence=IMP] [GO:0030100 "regulation of
endocytosis" evidence=IMP] [GO:0001525 "angiogenesis" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005768 "endosome" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-031118-30
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0005768 GO:GO:0001525 GO:GO:0030100 GO:GO:0016337
GO:GO:0001702 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 HSSP:P35278 GeneTree:ENSGT00640000091139
CTD:5878 KO:K07889 OMA:QCCGGGN EMBL:BX005093 EMBL:BC045466
EMBL:BC065634 IPI:IPI00499049 RefSeq:NP_958909.1 UniGene:Dr.5030
SMR:Q7ZVP2 IntAct:Q7ZVP2 STRING:Q7ZVP2 Ensembl:ENSDART00000034536
GeneID:386807 KEGG:dre:386807 InParanoid:Q7ZVP2 OrthoDB:EOG42FSJK
NextBio:20814025 Uniprot:Q7ZVP2
Length = 221
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 58/164 (35%), Positives = 88/164 (53%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV++G+ GK++ V R + G+F + E TIG + ++F WDTAGQE
Sbjct: 23 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQE 82
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKN- 131
++ L YY Q AI+++D+T T+ W ++L R NI I L GNK D+ N
Sbjct: 83 RYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVIALAGNKADLANK 142
Query: 132 RQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARKLAGS 174
R V ++ + N L + E SAK+ N + F+ +A+KL S
Sbjct: 143 RAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKS 186
>ZFIN|ZDB-GENE-040718-293 [details] [associations]
symbol:rab11bb "RAB11B, member RAS oncogene family,
b" species:7955 "Danio rerio" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-040718-293
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
HOVERGEN:HBG009351 GeneTree:ENSGT00690000101664 KO:K07905
OMA:ERSAHDE EMBL:AL929146 EMBL:CU469531 EMBL:BC076247
IPI:IPI00489756 RefSeq:NP_001002555.1 RefSeq:XP_003198017.1
RefSeq:XP_003198018.1 UniGene:Dr.84381 SMR:Q6DGU2 STRING:Q6DGU2
Ensembl:ENSDART00000036452 Ensembl:ENSDART00000123392
GeneID:100536606 GeneID:436828 KEGG:dre:100536606 KEGG:dre:436828
CTD:436828 InParanoid:Q6DGU2 NextBio:20831260 Uniprot:Q6DGU2
Length = 218
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 55/154 (35%), Positives = 84/154 (54%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FK+V++GD G GK+ + R EF + + TIGVE + I+ WDTAGQE
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCEN-IPIVLCGNKVDVKN- 131
++ + YY A++++D+ LTY+NV W ++L +N I I+L GNK D+++
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHL 131
Query: 132 RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 164
R V + F K NL + E SA + N E+ F
Sbjct: 132 RAVPTDEARAFAEKNNLSFIETSALDSTNVEEAF 165
>TAIR|locus:2118500 [details] [associations]
symbol:RABG3A "RAB GTPase homolog G3A" species:3702
"Arabidopsis thaliana" [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006913
"nucleocytoplasmic transport" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005774
"vacuolar membrane" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0016192 "vesicle-mediated transport"
evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0005774
GO:GO:0007264 EMBL:CP002687 GO:GO:0015031 KO:K07976 IPI:IPI00938875
RefSeq:NP_001154217.1 UniGene:At.26414 ProteinModelPortal:F4JKR6
SMR:F4JKR6 PRIDE:F4JKR6 EnsemblPlants:AT4G09720.3 GeneID:826558
KEGG:ath:AT4G09720 OMA:NEHEQDI Uniprot:F4JKR6
Length = 217
Score = 178 (67.7 bits), Expect = 5.2e-21, Sum P(2) = 5.2e-21
Identities = 37/131 (28%), Positives = 65/131 (49%)
Query: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEK 74
K++++GD G GKT+ + +++ +F +Y+ TIG + + + WDTAGQE+
Sbjct: 10 KVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQIWDTAGQER 69
Query: 75 FGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENI---------------- 118
F L +Y C +++DV ++ N+ TWH + + NI
Sbjct: 70 FQSLGAAFYRGADCCALVYDVNVLRSFDNLETWHEEFLKQAWNIGMWTIAEASPSDPKTF 129
Query: 119 PIVLCGNKVDV 129
P ++ GNK+DV
Sbjct: 130 PFIVLGNKIDV 140
Score = 83 (34.3 bits), Expect = 5.2e-21, Sum P(2) = 5.2e-21
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 116 ENIPIVLCGNKVDV---KNRQVKAKQVT--FHRKKNLQYYEISAKSNYNFEKPFLYLAR 169
+ P ++ GNK+DV +R V K+ N+ Y+E SAK ++N ++ FL +A+
Sbjct: 127 KTFPFIVLGNKIDVDGGSSRVVSDKKAADWCASNGNIPYFETSAKDDFNVDEAFLTIAK 185
>DICTYBASE|DDB_G0269238 [details] [associations]
symbol:rab11A "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0034394 "protein localization to
cell surface" evidence=IMP] [GO:0032794 "GTPase activating protein
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000331 "contractile vacuole" evidence=IDA] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0031164 "contractile
vacuolar membrane" evidence=IEA;IDA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA;IDA] [GO:0007231
"osmosensory signaling pathway" evidence=IMP] [GO:0005525 "GTP
binding" evidence=IEA;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA;IDA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005773 "vacuole" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0269238 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0045335 GO:GO:0015031
PROSITE:PS51419 GO:GO:0007231 GO:GO:0031164 GO:GO:0034394
eggNOG:COG1100 KO:K07976 OMA:AMGTRDD EMBL:U02925 RefSeq:XP_646557.1
ProteinModelPortal:P36412 SMR:P36412 MINT:MINT-6947977
STRING:P36412 PRIDE:P36412 EnsemblProtists:DDB0191190
GeneID:8617525 KEGG:ddi:DDB_G0269238 ProtClustDB:CLSZ2431439
Uniprot:P36412
Length = 214
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 57/163 (34%), Positives = 87/163 (53%)
Query: 5 SQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRF 64
SQ+ DY +K+V++GD G GK+ + R EF + + TIGVE T I+
Sbjct: 6 SQEEYDY-LYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGKTIKA 64
Query: 65 YCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLC 123
WDTAGQE++ + YY A++++D+ + TYK+V W +L + NI I+L
Sbjct: 65 QVWDTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWILELRENADRNIEIMLV 124
Query: 124 GNKVDVKN-RQVKAKQVT-FHRKKNLQYYEISAKSNYNFEKPF 164
GNK D+++ R+V + F K L + E SA + N E F
Sbjct: 125 GNKSDLRHLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAF 167
>DICTYBASE|DDB_G0272138 [details] [associations]
symbol:rab2B "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0272138 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GenomeReviews:CM000151_GR EMBL:AAFI02000008 PROSITE:PS51419
eggNOG:COG1100 KO:K07976 HSSP:Q15907 OMA:EEGLFFM RefSeq:XP_645208.1
ProteinModelPortal:Q559X6 SMR:Q559X6 PRIDE:Q559X6
EnsemblProtists:DDB0229402 GeneID:8618381 KEGG:ddi:DDB_G0272138
Uniprot:Q559X6
Length = 202
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 56/156 (35%), Positives = 86/156 (55%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FK ++VGD GK+ + + + F + TIGVE N +I+ WDTAGQE
Sbjct: 25 FKYIMVGDSAVGKSNLLLQFVDKRFAPNSDFTIGVEFGSRSININDKQIKLQIWDTAGQE 84
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV---CENIPIVLCGNKVDVK 130
KF + YY CA+I++D+T R +++++ +W D CR C+ + VL GNK D++
Sbjct: 85 KFRSITRAYYRGAVCAMIVYDITRRDSFESLNSWLTD-CRKFSSCD-VTTVLIGNKADLE 142
Query: 131 -NRQVKAKQVT-FHRKKNLQYYEISAKSNYNFEKPF 164
NRQV + F K L ++E SAK+ N ++ F
Sbjct: 143 ANRQVSTSEAKEFAEKNGLMFFETSAKTALNVDEAF 178
>UNIPROTKB|E1C8H0 [details] [associations]
symbol:RAB4A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA] [GO:0030100
"regulation of endocytosis" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0008565 GO:GO:0005768 GO:GO:0003924 GO:GO:0030100
GO:GO:0019003 GeneTree:ENSGT00690000101805 OMA:DESNHTI
EMBL:AADN02035654 EMBL:AADN02035655 EMBL:AADN02035652
EMBL:AADN02035653 IPI:IPI00591536 Ensembl:ENSGALT00000018060
Uniprot:E1C8H0
Length = 213
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 57/169 (33%), Positives = 95/169 (56%)
Query: 7 QTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK-IRFY 65
+T D+ FK +++G+ GTGK+ + + + +F+ TIGVE GK ++
Sbjct: 3 ETYDF-LFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGS-KIINVGGKYVKLQ 60
Query: 66 CWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCG 124
WDTAGQE+F + YY A++++D+T+R TY + W D + +NI I+LCG
Sbjct: 61 IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCG 120
Query: 125 NKVDVK-NRQVKAKQVT-FHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
NK D+ +R+V + + F ++ L + E SA + N E+ F+ ARK+
Sbjct: 121 NKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKI 169
>UNIPROTKB|A6QLS9 [details] [associations]
symbol:RAB10 "RAB10 protein" species:9913 "Bos taurus"
[GO:0072659 "protein localization to plasma membrane" evidence=IEA]
[GO:0072372 "primary cilium" evidence=IEA] [GO:0055037 "recycling
endosome" evidence=IEA] [GO:0032869 "cellular response to insulin
stimulus" evidence=IEA] [GO:0032593 "insulin-responsive
compartment" evidence=IEA] [GO:0031489 "myosin V binding"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6 CTD:10890 KO:K07903
OMA:WKSKCCS GeneTree:ENSGT00700000104031 EMBL:DAAA02031611
EMBL:DAAA02031612 EMBL:DAAA02031613 EMBL:BC148073 IPI:IPI00708125
RefSeq:NP_001094758.1 UniGene:Bt.103028 SMR:A6QLS9
Ensembl:ENSBTAT00000001303 GeneID:783373 KEGG:bta:783373
InParanoid:A6QLS9 NextBio:20926051 Uniprot:A6QLS9
Length = 200
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 56/174 (32%), Positives = 94/174 (54%)
Query: 5 SQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRF 64
+++T D FKL+++GD G GKT + R F + TIG++ KI+
Sbjct: 2 AKKTYDL-LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 65 YCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLC 123
WDTAGQE+F + YY ++++D+T +++N+ W R++ E++ +L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLL 120
Query: 124 GNKVDVKNRQV--KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGST 175
GNK D+ +++V K K R+ ++++E SAK+N N EK FL LA + T
Sbjct: 121 GNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT 174
>UNIPROTKB|Q2TBH7 [details] [associations]
symbol:RAB4A "Ras-related protein Rab-4A" species:9913 "Bos
taurus" [GO:0006184 "GTP catabolic process" evidence=ISS]
[GO:0019003 "GDP binding" evidence=ISS] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005525 "GTP binding" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0016020
GO:GO:0008565 GO:GO:0005768 GO:GO:0003924 GO:GO:0030100
PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
GeneTree:ENSGT00690000101805 EMBL:BC110198 IPI:IPI00843020
RefSeq:NP_001033774.1 UniGene:Bt.91385 ProteinModelPortal:Q2TBH7
SMR:Q2TBH7 STRING:Q2TBH7 PRIDE:Q2TBH7 Ensembl:ENSBTAT00000049768
GeneID:615849 KEGG:bta:615849 CTD:5867 InParanoid:Q2TBH7 KO:K07879
OrthoDB:EOG4WM4VM NextBio:20899821 Uniprot:Q2TBH7
Length = 218
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 57/169 (33%), Positives = 95/169 (56%)
Query: 7 QTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK-IRFY 65
+T D+ FK +++G+ GTGK+ + + + +F+ TIGVE GK ++
Sbjct: 8 ETYDF-LFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGS-KIINVGGKYVKLQ 65
Query: 66 CWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCG 124
WDTAGQE+F + YY A++++D+T+R TY + W D + +NI I+LCG
Sbjct: 66 IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCG 125
Query: 125 NKVDVK-NRQVKAKQVT-FHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
NK D+ +R+V + + F ++ L + E SA + N E+ F+ ARK+
Sbjct: 126 NKKDLDTDREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKI 174
>UNIPROTKB|E2QTP7 [details] [associations]
symbol:RAB4A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030100 "regulation of endocytosis"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0008565 GO:GO:0005768 GO:GO:0003924 GO:GO:0030100
GO:GO:0019003 GeneTree:ENSGT00690000101805 OMA:DESNHTI
EMBL:AAEX03002724 Ensembl:ENSCAFT00000019425 Uniprot:E2QTP7
Length = 218
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 57/169 (33%), Positives = 95/169 (56%)
Query: 7 QTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK-IRFY 65
+T D+ FK +++G+ GTGK+ + + + +F+ TIGVE GK ++
Sbjct: 8 ETYDF-LFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGS-KIINVGGKYVKLQ 65
Query: 66 CWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCG 124
WDTAGQE+F + YY A++++D+T+R TY + W D + +NI I+LCG
Sbjct: 66 IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCG 125
Query: 125 NKVDVK-NRQVKAKQVT-FHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
NK D+ +R+V + + F ++ L + E SA + N E+ F+ ARK+
Sbjct: 126 NKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKI 174
>UNIPROTKB|F2Z4P9 [details] [associations]
symbol:RAB10 "Ras-related protein Rab-10" species:9615
"Canis lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 UniGene:Cfa.3815
NextBio:20817448 CTD:10890 KO:K07903 OMA:WKSKCCS
GeneTree:ENSGT00700000104031 EMBL:AAEX03010790 EMBL:AAEX03010791
RefSeq:NP_001003277.2 ProteinModelPortal:F2Z4P9 SMR:F2Z4P9
PRIDE:F2Z4P9 Ensembl:ENSCAFT00000006816 GeneID:403958
KEGG:cfa:403958 Uniprot:F2Z4P9
Length = 200
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 56/174 (32%), Positives = 94/174 (54%)
Query: 5 SQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRF 64
+++T D FKL+++GD G GKT + R F + TIG++ KI+
Sbjct: 2 AKKTYDL-LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 65 YCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLC 123
WDTAGQE+F + YY ++++D+T +++N+ W R++ E++ +L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLL 120
Query: 124 GNKVDVKNRQV--KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGST 175
GNK D+ +++V K K R+ ++++E SAK+N N EK FL LA + T
Sbjct: 121 GNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT 174
>UNIPROTKB|P20338 [details] [associations]
symbol:RAB4A "Ras-related protein Rab-4A" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0030100 "regulation of endocytosis" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0019003 "GDP binding" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0005525 "GTP binding"
evidence=IDA] [GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
Reactome:REACT_11123 InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005886
GO:GO:0007264 GO:GO:0008565 GO:GO:0003924 EMBL:CH471098
GO:GO:0055037 GO:GO:0030100 PROSITE:PS51419 GO:GO:0001671
GO:GO:0032593 eggNOG:COG1100 GO:GO:0019003 EMBL:AL117350
HOVERGEN:HBG009351 CTD:5867 KO:K07879 OrthoDB:EOG4WM4VM EMBL:M28211
EMBL:AY585832 EMBL:AF498934 EMBL:AK313807 EMBL:AL162595
EMBL:BC002438 EMBL:BC004309 IPI:IPI00480056 PIR:E34323
RefSeq:NP_004569.2 UniGene:Hs.296169 PDB:1YU9 PDB:1Z0K PDB:2BMD
PDB:2BME PDBsum:1YU9 PDBsum:1Z0K PDBsum:2BMD PDBsum:2BME
ProteinModelPortal:P20338 SMR:P20338 DIP:DIP-372N IntAct:P20338
MINT:MINT-1376149 STRING:P20338 PhosphoSite:P20338 DMDM:29337213
PaxDb:P20338 PRIDE:P20338 DNASU:5867 Ensembl:ENST00000366690
GeneID:5867 KEGG:hsa:5867 UCSC:uc001hth.3 GeneCards:GC01P229406
HGNC:HGNC:9781 HPA:CAB004990 MIM:179511 neXtProt:NX_P20338
PharmGKB:PA34141 InParanoid:P20338 EvolutionaryTrace:P20338
GenomeRNAi:5867 NextBio:22786 Bgee:P20338 CleanEx:HS_RAB4A
Genevestigator:P20338 GermOnline:ENSG00000168118 Uniprot:P20338
Length = 218
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 57/169 (33%), Positives = 95/169 (56%)
Query: 7 QTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK-IRFY 65
+T D+ FK +++G+ GTGK+ + + + +F+ TIGVE GK ++
Sbjct: 8 ETYDF-LFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGS-KIINVGGKYVKLQ 65
Query: 66 CWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCG 124
WDTAGQE+F + YY A++++D+T+R TY + W D + +NI I+LCG
Sbjct: 66 IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCG 125
Query: 125 NKVDVK-NRQVKAKQVT-FHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
NK D+ +R+V + + F ++ L + E SA + N E+ F+ ARK+
Sbjct: 126 NKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKI 174
>UNIPROTKB|P61026 [details] [associations]
symbol:RAB10 "Ras-related protein Rab-10" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0030670 "phagocytic vesicle
membrane" evidence=IEA] [GO:0055038 "recycling endosome membrane"
evidence=IEA] [GO:0097051 "establishment of protein localization to
endoplasmic reticulum membrane" evidence=IMP] [GO:0072372 "primary
cilium" evidence=IDA] [GO:0016197 "endosomal transport"
evidence=IMP] [GO:0055037 "recycling endosome" evidence=IDA]
[GO:0061467 "basolateral protein localization" evidence=ISS]
[GO:0005768 "endosome" evidence=IDA] [GO:0032593
"insulin-responsive compartment" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0031489 "myosin V binding"
evidence=IPI] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0071786 "endoplasmic reticulum tubular network organization"
evidence=IMP] [GO:0071782 "endoplasmic reticulum tubular network"
evidence=IDA] [GO:0030859 "polarized epithelial cell
differentiation" evidence=ISS] [GO:0043001 "Golgi to plasma
membrane protein transport" evidence=ISS] [GO:0000145 "exocyst"
evidence=ISS] [GO:0005802 "trans-Golgi network" evidence=ISS]
[GO:0016192 "vesicle-mediated transport" evidence=ISS] [GO:0032869
"cellular response to insulin stimulus" evidence=ISS] [GO:0072659
"protein localization to plasma membrane" evidence=ISS] [GO:0006893
"Golgi to plasma membrane transport" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0045200 "establishment of
neuroblast polarity" evidence=ISS] [GO:0005525 "GTP binding"
evidence=IDA] [GO:0019003 "GDP binding" evidence=IDA]
Reactome:REACT_11123 InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
EMBL:CH471053 GO:GO:0030670 GO:GO:0032869 GO:GO:0016197
GO:GO:0055037 GO:GO:0007409 GO:GO:0005802 GO:GO:0072372
GO:GO:0072659 PROSITE:PS51419 GO:GO:0032593 GO:GO:0043001
GO:GO:0055038 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
GO:GO:0045200 GO:GO:0030859 HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6
CTD:10890 KO:K07903 EMBL:AF086917 EMBL:AF297660 EMBL:AF106681
EMBL:AL136650 EMBL:AK023223 EMBL:AF498945 EMBL:CR457303
EMBL:BC000896 IPI:IPI00016513 RefSeq:NP_057215.3 UniGene:Hs.467960
ProteinModelPortal:P61026 SMR:P61026 IntAct:P61026
MINT:MINT-1404404 STRING:P61026 PhosphoSite:P61026 DMDM:46577638
PaxDb:P61026 PeptideAtlas:P61026 PRIDE:P61026 DNASU:10890
Ensembl:ENST00000264710 GeneID:10890 KEGG:hsa:10890 UCSC:uc002rgv.3
GeneCards:GC02P026256 HGNC:HGNC:9759 HPA:HPA045611 MIM:612672
neXtProt:NX_P61026 PharmGKB:PA34100 InParanoid:P61026 OMA:WKSKCCS
PhylomeDB:P61026 ChiTaRS:RAB10 GenomeRNAi:10890 NextBio:41349
ArrayExpress:P61026 Bgee:P61026 CleanEx:HS_RAB10
Genevestigator:P61026 Uniprot:P61026
Length = 200
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 56/174 (32%), Positives = 94/174 (54%)
Query: 5 SQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRF 64
+++T D FKL+++GD G GKT + R F + TIG++ KI+
Sbjct: 2 AKKTYDL-LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 65 YCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLC 123
WDTAGQE+F + YY ++++D+T +++N+ W R++ E++ +L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLL 120
Query: 124 GNKVDVKNRQV--KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGST 175
GNK D+ +++V K K R+ ++++E SAK+N N EK FL LA + T
Sbjct: 121 GNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT 174
>UNIPROTKB|F2Z5F2 [details] [associations]
symbol:RAB10 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072659 "protein localization to plasma membrane"
evidence=IEA] [GO:0072372 "primary cilium" evidence=IEA]
[GO:0055037 "recycling endosome" evidence=IEA] [GO:0032869
"cellular response to insulin stimulus" evidence=IEA] [GO:0032593
"insulin-responsive compartment" evidence=IEA] [GO:0031489 "myosin
V binding" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 CTD:10890 KO:K07903 OMA:WKSKCCS
GeneTree:ENSGT00700000104031 EMBL:CU571288 RefSeq:NP_001229989.1
UniGene:Ssc.5049 ProteinModelPortal:F2Z5F2 SMR:F2Z5F2 PRIDE:F2Z5F2
Ensembl:ENSSSCT00000009379 GeneID:100526104 KEGG:ssc:100526104
ArrayExpress:F2Z5F2 Uniprot:F2Z5F2
Length = 200
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 56/174 (32%), Positives = 94/174 (54%)
Query: 5 SQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRF 64
+++T D FKL+++GD G GKT + R F + TIG++ KI+
Sbjct: 2 AKKTYDL-LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 65 YCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLC 123
WDTAGQE+F + YY ++++D+T +++N+ W R++ E++ +L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLL 120
Query: 124 GNKVDVKNRQV--KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGST 175
GNK D+ +++V K K R+ ++++E SAK+N N EK FL LA + T
Sbjct: 121 GNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT 174
>UNIPROTKB|K7GPC9 [details] [associations]
symbol:RAB9A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 TIGRFAMs:TIGR00231 GeneTree:ENSGT00700000104345
EMBL:CU633939 Ensembl:ENSSSCT00000035348 Uniprot:K7GPC9
Length = 160
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 51/153 (33%), Positives = 83/153 (54%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FK++++GDGG GK++ + R++T +F+ + TIGVE D + + WDTAGQE
Sbjct: 8 FKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQE 67
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVD 128
+F LR +Y C ++ F V +++N+ W ++ E+ P V+ GNK+D
Sbjct: 68 RFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKID 127
Query: 129 VKNRQVKAKQVTFHRKKN--LQYYEISAKSNYN 159
+ RQV A++ + N Y+E SAK N
Sbjct: 128 ISERQVSAEEAQAWCRDNGDYPYFETSAKDATN 160
>UNIPROTKB|Q5R5U1 [details] [associations]
symbol:RAB10 "Ras-related protein Rab-10" species:9601
"Pongo abelii" [GO:0005525 "GTP binding" evidence=ISS] [GO:0005768
"endosome" evidence=ISS] [GO:0005789 "endoplasmic reticulum
membrane" evidence=ISS] [GO:0005794 "Golgi apparatus" evidence=ISS]
[GO:0005802 "trans-Golgi network" evidence=ISS] [GO:0006893 "Golgi
to plasma membrane transport" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0016192 "vesicle-mediated
transport" evidence=ISS] [GO:0016197 "endosomal transport"
evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS] [GO:0030859
"polarized epithelial cell differentiation" evidence=ISS]
[GO:0032593 "insulin-responsive compartment" evidence=ISS]
[GO:0032869 "cellular response to insulin stimulus" evidence=ISS]
[GO:0043001 "Golgi to plasma membrane protein transport"
evidence=ISS] [GO:0045200 "establishment of neuroblast polarity"
evidence=ISS] [GO:0055037 "recycling endosome" evidence=ISS]
[GO:0061467 "basolateral protein localization" evidence=ISS]
[GO:0071782 "endoplasmic reticulum tubular network" evidence=ISS]
[GO:0071786 "endoplasmic reticulum tubular network organization"
evidence=ISS] [GO:0072372 "primary cilium" evidence=ISS]
[GO:0072659 "protein localization to plasma membrane" evidence=ISS]
[GO:0097051 "establishment of protein localization to endoplasmic
reticulum membrane" evidence=ISS] [GO:0000145 "exocyst"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264 GO:GO:0030670
GO:GO:0032869 GO:GO:0016197 GO:GO:0055037 GO:GO:0007409
GO:GO:0005802 GO:GO:0072372 GO:GO:0072659 PROSITE:PS51419
GO:GO:0032593 GO:GO:0043001 GO:GO:0055038 GO:GO:0019003
HOVERGEN:HBG009351 GO:GO:0045200 GO:GO:0030859 HSSP:P55258
CTD:10890 KO:K07903 EMBL:CR859178 EMBL:CR860762
RefSeq:NP_001126682.1 UniGene:Pab.18148 ProteinModelPortal:Q5R5U1
SMR:Q5R5U1 PRIDE:Q5R5U1 GeneID:100173682 KEGG:pon:100173682
InParanoid:Q5R5U1 Uniprot:Q5R5U1
Length = 200
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 56/174 (32%), Positives = 94/174 (54%)
Query: 5 SQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRF 64
+++T D FKL+++GD G GKT + R F + TIG++ KI+
Sbjct: 2 AKKTYDL-LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 65 YCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLC 123
WDTAGQE+F + YY ++++D+T +++N+ W R++ E++ +L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLL 120
Query: 124 GNKVDVKNRQV--KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGST 175
GNK D+ +++V K K R+ ++++E SAK+N N EK FL LA + T
Sbjct: 121 GNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT 174
>MGI|MGI:105066 [details] [associations]
symbol:Rab10 "RAB10, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005525 "GTP binding" evidence=ISO] [GO:0005768 "endosome"
evidence=ISO] [GO:0005789 "endoplasmic reticulum membrane"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=ISO;IDA]
[GO:0005802 "trans-Golgi network" evidence=ISO] [GO:0006810
"transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=TAS] [GO:0006893 "Golgi to plasma membrane
transport" evidence=ISO] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=ISO] [GO:0016192 "vesicle-mediated
transport" evidence=IMP] [GO:0016197 "endosomal transport"
evidence=ISO] [GO:0019003 "GDP binding" evidence=ISO] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0031489 "myosin V binding"
evidence=ISO] [GO:0032593 "insulin-responsive compartment"
evidence=ISO] [GO:0032869 "cellular response to insulin stimulus"
evidence=IMP] [GO:0042995 "cell projection" evidence=IEA]
[GO:0045200 "establishment of neuroblast polarity" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0055037 "recycling endosome" evidence=ISO] [GO:0071782
"endoplasmic reticulum tubular network" evidence=ISO] [GO:0071786
"endoplasmic reticulum tubular network organization" evidence=ISO]
[GO:0072372 "primary cilium" evidence=ISO;IDA] [GO:0072659 "protein
localization to plasma membrane" evidence=IMP] [GO:0097051
"establishment of protein localization to endoplasmic reticulum
membrane" evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:105066 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
Reactome:REACT_147847 GO:GO:0007264 GO:GO:0030670 GO:GO:0032869
GO:GO:0016197 GO:GO:0055037 GO:GO:0007409 GO:GO:0005802
GO:GO:0072372 GO:GO:0072659 PROSITE:PS51419 GO:GO:0032593
GO:GO:0043001 GO:GO:0055038 eggNOG:COG1100 GO:GO:0019003
HOVERGEN:HBG009351 GO:GO:0045200 GO:GO:0030859 HOGENOM:HOG000233968
OrthoDB:EOG4K3KX6 CTD:10890 KO:K07903 OMA:WKSKCCS ChiTaRS:RAB10
EMBL:AF035646 EMBL:AK008725 EMBL:AK028320 EMBL:AK087964
EMBL:BC056374 IPI:IPI00130118 RefSeq:NP_057885.1 UniGene:Mm.378993
ProteinModelPortal:P61027 SMR:P61027 IntAct:P61027 STRING:P61027
PhosphoSite:P61027 PaxDb:P61027 PRIDE:P61027
Ensembl:ENSMUST00000021001 GeneID:19325 KEGG:mmu:19325
InParanoid:P61027 NextBio:296287 Bgee:P61027 CleanEx:MM_RAB10
Genevestigator:P61027 GermOnline:ENSMUSG00000020671 Uniprot:P61027
Length = 200
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 56/174 (32%), Positives = 94/174 (54%)
Query: 5 SQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRF 64
+++T D FKL+++GD G GKT + R F + TIG++ KI+
Sbjct: 2 AKKTYDL-LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 65 YCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLC 123
WDTAGQE+F + YY ++++D+T +++N+ W R++ E++ +L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLL 120
Query: 124 GNKVDVKNRQV--KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGST 175
GNK D+ +++V K K R+ ++++E SAK+N N EK FL LA + T
Sbjct: 121 GNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT 174
>RGD|1565263 [details] [associations]
symbol:Rab19 "RAB19, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:1565263 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104044 CTD:401409 OMA:RNSLHLY
OrthoDB:EOG4WQ13N EMBL:BC088443 IPI:IPI00200723
RefSeq:NP_001019497.1 UniGene:Rn.53184 ProteinModelPortal:Q5M7U5
PRIDE:Q5M7U5 Ensembl:ENSRNOT00000012280 GeneID:500088
KEGG:rno:500088 UCSC:RGD:1565263 InParanoid:Q5M7U5 NextBio:705052
Genevestigator:Q5M7U5 GermOnline:ENSRNOG00000009030 Uniprot:Q5M7U5
Length = 217
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 57/169 (33%), Positives = 93/169 (55%)
Query: 7 QTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYC 66
+ VDY FK++++GD GKT V+ +G + + + TIGV+ + K++
Sbjct: 12 ENVDY-LFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEIDGKKVKMQV 70
Query: 67 WDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV-CENIPIVLCGN 125
WDTAGQE+F + YY AII +D+T R T+++VP W ++ + N+ I+L GN
Sbjct: 71 WDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGN 130
Query: 126 KVDV-KNRQVKAKQV-TFHRKKNL-QYYEISAKSNYNFEKPFLYLARKL 171
K D+ + R V + T K L E SAK + N ++ F+ +A++L
Sbjct: 131 KSDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESRNIDEVFVLMAKEL 179
>TAIR|locus:2199716 [details] [associations]
symbol:RABG3B "RAB GTPase homolog G3B" species:3702
"Arabidopsis thaliana" [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005773 "vacuole"
evidence=IDA] [GO:0010089 "xylem development" evidence=IMP]
[GO:0010508 "positive regulation of autophagy" evidence=IMP]
[GO:0010623 "developmental programmed cell death" evidence=IMP]
[GO:0048102 "autophagic cell death" evidence=IMP] [GO:0016192
"vesicle-mediated transport" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005773 GO:GO:0007264
GO:GO:0015031 GO:GO:0010508 PROSITE:PS51419 GO:GO:0010089
eggNOG:COG1100 GO:GO:0048102 GO:GO:0010623 EMBL:AC003979
EMBL:Y12227 KO:K07976 HOGENOM:HOG000233968 EMBL:AB071850
EMBL:Y09821 EMBL:BT024589 IPI:IPI00534402 PIR:T00770
RefSeq:NP_173688.1 UniGene:At.20067 ProteinModelPortal:O04157
SMR:O04157 STRING:O04157 PaxDb:O04157 PRIDE:O04157
EnsemblPlants:AT1G22740.1 GeneID:838880 KEGG:ath:AT1G22740
TAIR:At1g22740 InParanoid:O04157 OMA:CIAKLAL PhylomeDB:O04157
ProtClustDB:CLSN2914412 Genevestigator:O04157 GermOnline:AT1G22740
Uniprot:O04157
Length = 203
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 54/173 (31%), Positives = 92/173 (53%)
Query: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEK 74
K++I+GD G GKT+ + +++ +F ++Y+ TIG + + + + WDTAGQE+
Sbjct: 10 KVIILGDSGVGKTSLMNQYVNNKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQER 69
Query: 75 FGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRD-LCRVCEN----IPIVLCGNKVDV 129
F L +Y C ++++DV +++++ WH + L R P +L GNKVD+
Sbjct: 70 FQSLGVAFYRGADCCVLVYDVNHLKSFESLDNWHNEFLTRASPRDPMAFPFILLGNKVDI 129
Query: 130 ---KNRQVKAKQVT--FHRKKNLQYYEISAKSNYNFEKPFLYLAR-KLAGSTD 176
+R V K+ K N+ Y+E SAK +YN + FL + + LA D
Sbjct: 130 DGGNSRVVSEKKAREWCAEKGNIVYFETSAKEDYNVDDSFLCITKLALANERD 182
>ZFIN|ZDB-GENE-040426-2860 [details] [associations]
symbol:rab11ba "RAB11B, member RAS oncogene
family, a" species:7955 "Danio rerio" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-040426-2860
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
HOVERGEN:HBG009351 HSSP:P35278 KO:K07905 EMBL:BC048889
IPI:IPI00509689 RefSeq:NP_999935.1 UniGene:Dr.76644
ProteinModelPortal:Q802D1 SMR:Q802D1 STRING:Q802D1 PRIDE:Q802D1
GeneID:406798 KEGG:dre:406798 CTD:406798 InParanoid:Q802D1
NextBio:20818308 ArrayExpress:Q802D1 Bgee:Q802D1 Uniprot:Q802D1
Length = 218
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 56/158 (35%), Positives = 86/158 (54%)
Query: 10 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 69
DY F++V++GD G GK+ + R EF + + TIGVE + I+ WDT
Sbjct: 9 DY-LFRVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 70 AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCEN-IPIVLCGNKVD 128
AGQE++ + YY A++++D+ LTY+NV W ++L +N I I+L GNK D
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSD 127
Query: 129 VKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 164
+++ R V + F K NL + E SA + N E+ F
Sbjct: 128 LRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAF 165
>FB|FBgn0014010 [details] [associations]
symbol:Rab5 "Rab5" species:7227 "Drosophila melanogaster"
[GO:0005525 "GTP binding" evidence=IEA;NAS] [GO:0003924 "GTPase
activity" evidence=ISS;NAS] [GO:0048488 "synaptic vesicle
endocytosis" evidence=TAS] [GO:0016189 "synaptic vesicle to
endosome fusion" evidence=IMP;TAS] [GO:0005769 "early endosome"
evidence=IDA;NAS] [GO:0006325 "chromatin organization"
evidence=IMP] [GO:0016321 "female meiosis chromosome segregation"
evidence=IMP] [GO:0007067 "mitosis" evidence=IMP] [GO:0050803
"regulation of synapse structure and activity" evidence=IMP]
[GO:0007349 "cellularization" evidence=IMP] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0007298 "border follicle cell
migration" evidence=IMP] [GO:0006897 "endocytosis" evidence=IMP]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IMP] [GO:0035088 "establishment or maintenance of
apical/basal cell polarity" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0031982 "vesicle" evidence=ISS]
[GO:0007220 "Notch receptor processing" evidence=IMP] [GO:0035220
"wing disc development" evidence=IMP] [GO:0048477 "oogenesis"
evidence=IMP] [GO:0030100 "regulation of endocytosis" evidence=IMP]
[GO:0034058 "endosomal vesicle fusion" evidence=IMP] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0046664 "dorsal closure, amnioserosa morphology
change" evidence=IMP] [GO:0048803 "imaginal disc-derived male
genitalia morphogenesis" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0008285
GO:GO:0007264 GO:GO:0007067 EMBL:AE014134 GO:GO:0005811
GO:GO:0015031 GO:GO:0003924 GO:GO:0050803 GO:GO:0035220
GO:GO:0030100 GO:GO:0007298 GO:GO:0048813 GO:GO:0007409
GO:GO:0007220 GO:GO:0005769 eggNOG:COG1100 GO:GO:0006325
GO:GO:0016321 GO:GO:0007349 GO:GO:0035088 GO:GO:0046664
GO:GO:0016189 GO:GO:0048803 HSSP:P35278
GeneTree:ENSGT00640000091139 OMA:VDLQESN ChiTaRS:RAB5A KO:K07889
GO:GO:0034058 EMBL:AY060343 EMBL:AY081180 EMBL:AY081181
EMBL:AB035353 EMBL:AB035671 EMBL:BK000968 RefSeq:NP_523457.1
RefSeq:NP_722795.1 RefSeq:NP_722796.1 RefSeq:NP_722797.1
RefSeq:NP_722798.1 RefSeq:NP_722799.1 UniGene:Dm.6724 SMR:Q9V3I2
MINT:MINT-334912 STRING:Q9V3I2 EnsemblMetazoa:FBtr0077793
EnsemblMetazoa:FBtr0077794 EnsemblMetazoa:FBtr0077795
EnsemblMetazoa:FBtr0077796 EnsemblMetazoa:FBtr0077797
EnsemblMetazoa:FBtr0077798 EnsemblMetazoa:FBtr0330668
EnsemblMetazoa:FBtr0330669 EnsemblMetazoa:FBtr0330670 GeneID:33418
KEGG:dme:Dmel_CG3664 UCSC:CG3664-RA CTD:33418 FlyBase:FBgn0014010
InParanoid:Q9V3I2 OrthoDB:EOG4Z34WR GenomeRNAi:33418 NextBio:783450
Uniprot:Q9V3I2
Length = 219
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 56/161 (34%), Positives = 89/161 (55%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV++G+ GK++ V R + G+F + E TIG ++F WDTAGQE
Sbjct: 30 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQE 89
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKN- 131
++ L YY Q AI+++D+ + +++ TW ++L + NI I L GNK D+ N
Sbjct: 90 RYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKADLSNI 149
Query: 132 RQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARKL 171
R V+ + + ++N L + E SAK+ N FL +A+KL
Sbjct: 150 RVVEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKL 190
>UNIPROTKB|Q5ZIP7 [details] [associations]
symbol:RAB5A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005769
"early endosome" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0019003 "GDP binding" evidence=IEA] [GO:0030139 "endocytic
vesicle" evidence=IEA] [GO:0045121 "membrane raft" evidence=IEA]
[GO:0045921 "positive regulation of exocytosis" evidence=IEA]
[GO:0051489 "regulation of filopodium assembly" evidence=IEA]
[GO:2000286 "receptor internalization involved in canonical Wnt
receptor signaling pathway" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015629 GO:GO:0015031 GO:GO:0003924
GO:GO:0045121 GO:GO:0030139 GO:GO:0001726 GO:GO:0005769
eggNOG:COG1100 GO:GO:0051489 GO:GO:0019003 GO:GO:0045921
GO:GO:2000286 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00640000091139 CTD:5868 KO:K07887 OrthoDB:EOG4Z0B6M
OMA:EPQNTGA EMBL:AADN02001071 EMBL:AADN02001072 EMBL:AJ720737
IPI:IPI00596261 RefSeq:NP_001006363.1 UniGene:Gga.21473 SMR:Q5ZIP7
STRING:Q5ZIP7 Ensembl:ENSGALT00000018393 GeneID:420649
KEGG:gga:420649 InParanoid:Q5ZIP7 NextBio:20823533 Uniprot:Q5ZIP7
Length = 215
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 56/161 (34%), Positives = 88/161 (54%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV++G+ GK++ V R + G+F + E TIG + ++F WDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKN- 131
++ L YY Q AI+++D+T ++ W ++L R NI I L GNK D+ N
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADLANK 140
Query: 132 RQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARKL 171
R V ++ + N L + E SAK++ N + F+ +A+KL
Sbjct: 141 RAVDFQEAQAYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>MGI|MGI:105069 [details] [associations]
symbol:Rab4a "RAB4A, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001671 "ATPase activator activity" evidence=ISO]
[GO:0003924 "GTPase activity" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005525 "GTP binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005768 "endosome"
evidence=IDA] [GO:0005829 "cytosol" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IDA]
[GO:0015031 "protein transport" evidence=IDA] [GO:0016020
"membrane" evidence=ISO] [GO:0019003 "GDP binding" evidence=ISO]
[GO:0019905 "syntaxin binding" evidence=ISO] [GO:0030100
"regulation of endocytosis" evidence=IDA] [GO:0032482 "Rab protein
signal transduction" evidence=ISO] [GO:0032593 "insulin-responsive
compartment" evidence=ISO] [GO:0032781 "positive regulation of
ATPase activity" evidence=ISO] [GO:0035255 "ionotropic glutamate
receptor binding" evidence=ISO] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=ISO] [GO:0051117 "ATPase
binding" evidence=ISO] [GO:0055037 "recycling endosome"
evidence=ISO] Reactome:REACT_88307 InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 MGI:MGI:105069 GO:GO:0005525 TIGRFAMs:TIGR00231
Reactome:REACT_147847 GO:GO:0007264 GO:GO:0016020 GO:GO:0008565
GO:GO:0005768 GO:GO:0003924 GO:GO:0030100 PROSITE:PS51419
EMBL:CH466525 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
EMBL:AC147266 OrthoDB:EOG4WM4VM EMBL:D86563 EMBL:AB232591
EMBL:AK136566 EMBL:AK161877 IPI:IPI00113127 UniGene:Mm.9221
ProteinModelPortal:P56371 SMR:P56371 MINT:MINT-255793 STRING:P56371
PhosphoSite:P56371 PaxDb:P56371 PRIDE:P56371
Ensembl:ENSMUST00000117702 Ensembl:ENSMUST00000118535
InParanoid:P56371 CleanEx:MM_RAB4A Genevestigator:P56371
GermOnline:ENSMUSG00000019478 Uniprot:P56371
Length = 218
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 56/169 (33%), Positives = 95/169 (56%)
Query: 7 QTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK-IRFY 65
+T D+ FK +++G+ GTGK+ + + + +F+ TIGVE GK ++
Sbjct: 8 ETYDF-LFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGS-KIINVGGKYVKLQ 65
Query: 66 CWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCG 124
WDTAGQE+F + YY A++++D+T+R TY + W D + +NI ++LCG
Sbjct: 66 IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVLILCG 125
Query: 125 NKVDVK-NRQVKAKQVT-FHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
NK D+ +R+V + + F ++ L + E SA + N E+ F+ ARK+
Sbjct: 126 NKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFMQCARKI 174
>UNIPROTKB|O88565 [details] [associations]
symbol:Rab5a "Protein Rab5a" species:10116 "Rattus
norvegicus" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:620936 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0007264 GO:GO:0015629 GO:GO:0015031
GO:GO:0003924 GO:GO:0045121 GO:GO:0030139 GO:GO:0001726
GO:GO:0005769 eggNOG:COG1100 GO:GO:0051489 GO:GO:0019003
GO:GO:0045921 GO:GO:2000286 HOVERGEN:HBG009351 HOGENOM:HOG000233968
HSSP:P20339 CTD:5868 KO:K07887 OrthoDB:EOG4Z0B6M OMA:EPQNTGA
EMBL:CH474184 EMBL:AF072935 EMBL:BC161848 IPI:IPI00210733
RefSeq:NP_073183.1 UniGene:Rn.44477 SMR:O88565 IntAct:O88565
MINT:MINT-4584734 STRING:O88565 Ensembl:ENSRNOT00000016813
GeneID:64633 KEGG:rno:64633 InParanoid:O88565 NextBio:613600
Genevestigator:O88565 Uniprot:O88565
Length = 215
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 56/161 (34%), Positives = 88/161 (54%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV++G+ GK++ V R + G+F + E TIG + ++F WDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKN- 131
++ L YY Q AI+++D+T ++ W ++L R NI I L GNK D+ N
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFSRAKNWVKELQRQASPNIVIALSGNKADLANK 140
Query: 132 RQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARKL 171
R V ++ + N L + E SAK++ N + F+ +A+KL
Sbjct: 141 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>TAIR|locus:2124593 [details] [associations]
symbol:RABA1e "RAB GTPase homolog A1E" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0034976 "response to endoplasmic reticulum
stress" evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0015031
PROSITE:PS51419 EMBL:AL161548 eggNOG:COG1100 EMBL:AL021710
KO:K07976 HOGENOM:HOG000233968 EMBL:BT010933 EMBL:BT011645
IPI:IPI00520128 PIR:T04539 RefSeq:NP_193578.1 UniGene:At.27918
HSSP:P35278 ProteinModelPortal:O49513 SMR:O49513 PaxDb:O49513
PRIDE:O49513 EnsemblPlants:AT4G18430.1 GeneID:827574
KEGG:ath:AT4G18430 TAIR:At4g18430 InParanoid:O49513 OMA:AHEDSPG
PhylomeDB:O49513 ProtClustDB:CLSN2915845 Genevestigator:O49513
Uniprot:O49513
Length = 217
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 54/165 (32%), Positives = 93/165 (56%)
Query: 10 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 69
DY FKLV++GD G GK+ + R EF + + TIGVE + I+ WDT
Sbjct: 11 DY-LFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQLWDT 69
Query: 70 AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVD 128
AGQE++ + YY A++++D+T +T++NV W ++L + N+ I+L GNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVVIMLVGNKAD 129
Query: 129 VKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
+++ R V ++ +F ++N+ + E SA N E+ F ++ ++
Sbjct: 130 LRHLRAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQI 174
>ZFIN|ZDB-GENE-040718-250 [details] [associations]
symbol:rab30 "RAB30, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040718-250 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104044 CTD:27314 KO:K07917 OMA:DYKFLFK
OrthoDB:EOG43XV4G EMBL:CR538726 EMBL:BC076437 IPI:IPI00506069
RefSeq:NP_001002750.1 UniGene:Dr.32093 SMR:Q6DGB3
Ensembl:ENSDART00000055220 GeneID:437023 KEGG:dre:437023
InParanoid:Q6DGB3 NextBio:20831438 Uniprot:Q6DGB3
Length = 201
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 55/165 (33%), Positives = 90/165 (54%)
Query: 10 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 69
DY FK+V++G+ G GKT V+R G F TIGV+ K++ WDT
Sbjct: 5 DY-LFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEIKGVKVKLQIWDT 63
Query: 70 AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCEN-IPIVLCGNKVD 128
AGQE+F + YY I+ +D+T +++ +P W R++ + N + +L GNK+D
Sbjct: 64 AGQERFRSITQSYYRSANALILTYDITCEDSFRCLPEWLREIEQYANNQVVTILVGNKID 123
Query: 129 VKNRQ--VKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
+ +++ ++ + F +++ Y E SAK + N EK FL LA +L
Sbjct: 124 LADKREVLRQRAEEFADSQSMLYLETSAKESDNVEKLFLDLACEL 168
>DICTYBASE|DDB_G0289827 [details] [associations]
symbol:rab18 "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0006810
"transport" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 dictyBase:DDB_G0289827
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GenomeReviews:CM000154_GR EMBL:AAFI02000149 PROSITE:PS51419
eggNOG:COG1100 KO:K07910 OMA:FAKRHRT RefSeq:XP_636019.1 HSSP:Q9NP72
ProteinModelPortal:Q54GY8 SMR:Q54GY8 PRIDE:Q54GY8
EnsemblProtists:DDB0229409 GeneID:8627345 KEGG:ddi:DDB_G0289827
Uniprot:Q54GY8
Length = 202
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 56/161 (34%), Positives = 88/161 (54%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
+K++++GD GKT+ VKR F++ TIGVE + + K+ WDTAGQE
Sbjct: 7 YKVLLIGDSDVGKTSIVKRFSDDTFDEDLLCTIGVEFKMKEVKVDGKKVDLCIWDTAGQE 66
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE--NIPIVLCGNKVDVKN 131
KF L YY I+ +DVT R ++ N+ W ++ N+ +L GNK+D +N
Sbjct: 67 KFRALISSYYRGAHGIILTYDVTKRESFDNLNYWLNEVENFANRSNLVKLLVGNKIDKEN 126
Query: 132 RQVKAKQ-VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
R+V ++ F +KK + + E SAKS ++ F LA+K+
Sbjct: 127 REVTREEGAEFAKKKAMLFIECSAKSKIGIQQAFEELAQKI 167
>FB|FBgn0015790 [details] [associations]
symbol:Rab11 "Rab11" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS;NAS] [GO:0048477
"oogenesis" evidence=IMP] [GO:0005525 "GTP binding"
evidence=IEA;NAS] [GO:0007317 "regulation of pole plasm oskar mRNA
localization" evidence=IMP] [GO:0008103 "oocyte microtubule
cytoskeleton polarization" evidence=IMP] [GO:0006897 "endocytosis"
evidence=IDA;IMP] [GO:0007349 "cellularization" evidence=IMP]
[GO:0031532 "actin cytoskeleton reorganization" evidence=IMP]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0030140 "trans-Golgi
network transport vesicle" evidence=IDA] [GO:0005813 "centrosome"
evidence=IDA] [GO:0016360 "sensory organ precursor cell fate
determination" evidence=IMP] [GO:0005768 "endosome" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0001745 "compound eye
morphogenesis" evidence=IMP] [GO:0019730 "antimicrobial humoral
response" evidence=IMP] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0043195 "terminal bouton" evidence=IDA] [GO:0022416 "chaeta
development" evidence=IMP] [GO:0050807 "regulation of synapse
organization" evidence=IMP] [GO:0048749 "compound eye development"
evidence=IGI] [GO:0048599 "oocyte development" evidence=IMP]
[GO:0030723 "ovarian fusome organization" evidence=IMP] [GO:0034334
"adherens junction maintenance" evidence=IMP] [GO:0045169 "fusome"
evidence=IDA] [GO:0030718 "germ-line stem cell maintenance"
evidence=IMP] [GO:0031982 "vesicle" evidence=IDA] [GO:0060187 "cell
pole" evidence=IDA] [GO:0070732 "spindle envelope" evidence=IDA]
[GO:0048210 "Golgi vesicle fusion to target membrane" evidence=IMP]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0007112 "male
meiosis cytokinesis" evidence=IMP] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0048137 "spermatocyte division" evidence=IMP]
[GO:0032154 "cleavage furrow" evidence=IDA] [GO:0000916 "actomyosin
contractile ring contraction" evidence=IMP] [GO:0007391 "dorsal
closure" evidence=IMP] [GO:0042078 "germ-line stem cell division"
evidence=IMP] [GO:0045478 "fusome organization" evidence=IMP]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0046664 "dorsal closure, amnioserosa morphology change"
evidence=IMP] [GO:0007394 "dorsal closure, elongation of leading
edge cells" evidence=IMP] [GO:2000039 "regulation of trichome
morphogenesis" evidence=IGI;IMP] [GO:0055037 "recycling endosome"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030866 "cortical actin cytoskeleton organization"
evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:AE014297 GO:GO:0005635
GO:GO:0048471 GO:GO:0008103 GO:GO:0007264 GO:GO:0005811
GO:GO:0015031 GO:GO:0005768 GO:GO:0003924 GO:GO:0006897
GO:GO:0043195 GO:GO:0022416 GO:GO:0031532 GO:GO:0007298
GO:GO:0000916 GO:GO:0030140 GO:GO:0016360 GO:GO:0032154
GO:GO:0019730 GO:GO:0007112 GO:GO:0030718 GO:GO:0030723
GO:GO:0007349 GO:GO:0045169 GO:GO:0048137 GO:GO:0050807
GO:GO:0042078 GO:GO:0042052 GO:GO:0007317 GO:GO:0046664
GO:GO:2000039 GO:GO:0007394 GO:GO:0034334 GO:GO:0070732
GO:GO:0048210 GO:GO:0060187 HSSP:P07560
GeneTree:ENSGT00690000101664 KO:K07904 OMA:ERSAHDE EMBL:AY070528
EMBL:AY113404 EMBL:D84315 EMBL:AB035354 RefSeq:NP_477170.1
RefSeq:NP_599137.1 UniGene:Dm.3038 SMR:O18335 IntAct:O18335
MINT:MINT-758893 STRING:O18335 EnsemblMetazoa:FBtr0084010
EnsemblMetazoa:FBtr0084011 GeneID:42501 KEGG:dme:Dmel_CG5771
UCSC:CG5771-RA CTD:42501 FlyBase:FBgn0015790 InParanoid:O18335
OrthoDB:EOG4DNCMD ChiTaRS:Rab11 GenomeRNAi:42501 NextBio:829121
Uniprot:O18335
Length = 214
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 56/158 (35%), Positives = 85/158 (53%)
Query: 10 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 69
DY FK+V++GD G GK+ + R EF + + TIGVE + I+ WDT
Sbjct: 9 DY-LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDT 67
Query: 70 AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-RVCENIPIVLCGNKVD 128
AGQE++ + YY A++++D+ LTY+NV W R+L +NI I+L GNK D
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSD 127
Query: 129 VKN-RQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPF 164
+++ R V + ++N L + E SA + N E F
Sbjct: 128 LRHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAF 165
>UNIPROTKB|F1NI30 [details] [associations]
symbol:RAB10 "Ras-related protein Rab-10" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0031489 "myosin V binding" evidence=IEA] [GO:0032593
"insulin-responsive compartment" evidence=IEA] [GO:0032869
"cellular response to insulin stimulus" evidence=IEA] [GO:0055037
"recycling endosome" evidence=IEA] [GO:0072372 "primary cilium"
evidence=IEA] [GO:0072659 "protein localization to plasma membrane"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 IPI:IPI00593138 GeneTree:ENSGT00700000104031
EMBL:AADN02018422 EMBL:AADN02018423 EMBL:AADN02018424
EMBL:AADN02018425 EMBL:AADN02018426 EMBL:AADN02018427
Ensembl:ENSGALT00000026683 Uniprot:F1NI30
Length = 191
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 54/165 (32%), Positives = 90/165 (54%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKL+++GD GKT + R F + TIG++ KI+ WDTAGQE
Sbjct: 1 FKLLLIGDSQVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 60
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVDVKNR 132
+F + YY ++++D+T +++N+ W R++ E++ +L GNK D++++
Sbjct: 61 RFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDK 120
Query: 133 QV--KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGST 175
+V KAK R+ ++++E SAK+N N EK FL LA + T
Sbjct: 121 RVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT 165
>UNIPROTKB|F1NMT5 [details] [associations]
symbol:RAB10 "Ras-related protein Rab-10" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0031489 "myosin V binding" evidence=IEA] [GO:0032593
"insulin-responsive compartment" evidence=IEA] [GO:0032869
"cellular response to insulin stimulus" evidence=IEA] [GO:0055037
"recycling endosome" evidence=IEA] [GO:0072372 "primary cilium"
evidence=IEA] [GO:0072659 "protein localization to plasma membrane"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 OMA:WKSKCCS GeneTree:ENSGT00700000104031
EMBL:AADN02018422 EMBL:AADN02018423 EMBL:AADN02018424
EMBL:AADN02018425 EMBL:AADN02018426 EMBL:AADN02018427
IPI:IPI00818237 Ensembl:ENSGALT00000036791 Uniprot:F1NMT5
Length = 200
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 54/165 (32%), Positives = 90/165 (54%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKL+++GD GKT + R F + TIG++ KI+ WDTAGQE
Sbjct: 10 FKLLLIGDSQVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVDVKNR 132
+F + YY ++++D+T +++N+ W R++ E++ +L GNK D++++
Sbjct: 70 RFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDK 129
Query: 133 QV--KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGST 175
+V KAK R+ ++++E SAK+N N EK FL LA + T
Sbjct: 130 RVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT 174
>UNIPROTKB|Q0IIG7 [details] [associations]
symbol:RAB5A "Ras-related protein Rab-5A" species:9913 "Bos
taurus" [GO:0006184 "GTP catabolic process" evidence=ISS]
[GO:0019003 "GDP binding" evidence=ISS] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006897 "endocytosis" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0042470 "melanosome"
evidence=IEA] [GO:0031901 "early endosome membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0001726 "ruffle"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0042470 GO:GO:0007264 GO:GO:0007399 GO:GO:0030154
GO:GO:0031901 GO:GO:0015031 GO:GO:0003924 GO:GO:0006897
GO:GO:0001726 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
HOVERGEN:HBG009351 HOGENOM:HOG000233968 EMBL:BC122651
IPI:IPI00693824 RefSeq:NP_001069654.1 UniGene:Bt.24043
ProteinModelPortal:Q0IIG7 SMR:Q0IIG7 STRING:Q0IIG7 PRIDE:Q0IIG7
GeneID:539764 KEGG:bta:539764 CTD:5868 InParanoid:Q0IIG7 KO:K07887
OrthoDB:EOG4Z0B6M NextBio:20878203 Uniprot:Q0IIG7
Length = 215
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 56/161 (34%), Positives = 88/161 (54%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV++G+ GK++ V R + G+F + E TIG + ++F WDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKN- 131
++ L YY Q AI+++D+T ++ W ++L R NI I L GNK D+ N
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 140
Query: 132 RQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARKL 171
R V ++ + N L + E SAK++ N + F+ +A+KL
Sbjct: 141 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>UNIPROTKB|Q58DS9 [details] [associations]
symbol:RAB5C "Ras-related protein Rab-5C" species:9913 "Bos
taurus" [GO:0019003 "GDP binding" evidence=ISS] [GO:0042470
"melanosome" evidence=IEA] [GO:0031901 "early endosome membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030139 "endocytic vesicle" evidence=IEA] [GO:0030100
"regulation of endocytosis" evidence=IEA] [GO:0007032 "endosome
organization" evidence=IEA] [GO:0005811 "lipid particle"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0042470 GO:GO:0007264 GO:GO:0031901 GO:GO:0005811
GO:GO:0015031 GO:GO:0030100 GO:GO:0030139 PROSITE:PS51419
GO:GO:0007032 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00640000091139 OrthoDB:EOG4Z0B6M
OMA:VDLQESN EMBL:BT021518 EMBL:BC118226 IPI:IPI00694198
RefSeq:NP_001029915.1 UniGene:Bt.5451 ProteinModelPortal:Q58DS9
SMR:Q58DS9 STRING:Q58DS9 PRIDE:Q58DS9 Ensembl:ENSBTAT00000015581
GeneID:613749 KEGG:bta:613749 CTD:5878 InParanoid:Q58DS9 KO:K07889
NextBio:20898747 Uniprot:Q58DS9
Length = 216
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 56/161 (34%), Positives = 89/161 (55%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV++G+ GK++ V R + G+F + E TIG + ++F WDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKN- 131
++ L YY Q AI+++D+T T+ W ++L R NI I L GNK D+ +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASK 141
Query: 132 RQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARKL 171
R V+ ++ + + N L + E SAK+ N + F+ +A+KL
Sbjct: 142 RAVEFQEAQAYAEDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>UNIPROTKB|J9NUV0 [details] [associations]
symbol:RAB10 "Ras-related protein Rab-10" species:9615
"Canis lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104031 EMBL:AAEX03010790 EMBL:AAEX03010791
Ensembl:ENSCAFT00000048477 Uniprot:J9NUV0
Length = 209
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 55/170 (32%), Positives = 93/170 (54%)
Query: 5 SQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRF 64
+++T D FKL+++GD G GKT + R F + TIG++ KI+
Sbjct: 2 AKKTYDL-LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 65 YCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLC 123
WDTAGQE+F + YY ++++D+T +++N+ W R++ E++ +L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLL 120
Query: 124 GNKVDVKNRQV--KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
GNK D+ +++V K K R+ ++++E SAK+N N EK FL LA +
Sbjct: 121 GNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDI 170
>UNIPROTKB|P18066 [details] [associations]
symbol:RAB5A "Ras-related protein Rab-5A" species:9615
"Canis lupus familiaris" [GO:0006184 "GTP catabolic process"
evidence=ISS] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0019003 "GDP binding" evidence=ISS] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006897 "endocytosis" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0042470 "melanosome"
evidence=IEA] [GO:0031901 "early endosome membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0001726 "ruffle"
evidence=IEA] [GO:2000286 "receptor internalization involved in
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0051489
"regulation of filopodium assembly" evidence=IEA] [GO:0045921
"positive regulation of exocytosis" evidence=IEA] [GO:0045121
"membrane raft" evidence=IEA] [GO:0030139 "endocytic vesicle"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0042470 GO:GO:0007264 GO:GO:0007399 GO:GO:0030154
GO:GO:0031901 GO:GO:0005811 GO:GO:0015629 GO:GO:0015031
GO:GO:0003924 GO:GO:0006897 GO:GO:0045121 GO:GO:0030139
GO:GO:0001726 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0051489
GO:GO:0019003 GO:GO:0045921 GO:GO:2000286 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00640000091139 CTD:5868
KO:K07887 OrthoDB:EOG4Z0B6M EMBL:M35520 PIR:A30413
RefSeq:NP_001003317.1 UniGene:Cfa.40292 ProteinModelPortal:P18066
IntAct:P18066 STRING:P18066 PRIDE:P18066 Ensembl:ENSCAFT00000009363
GeneID:404008 KEGG:cfa:404008 InParanoid:P18066 OMA:EPQNTGA
NextBio:20817495 Uniprot:P18066
Length = 215
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 56/161 (34%), Positives = 88/161 (54%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV++G+ GK++ V R + G+F + E TIG + ++F WDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKN- 131
++ L YY Q AI+++D+T ++ W ++L R NI I L GNK D+ N
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 140
Query: 132 RQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARKL 171
R V ++ + N L + E SAK++ N + F+ +A+KL
Sbjct: 141 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>UNIPROTKB|P20339 [details] [associations]
symbol:RAB5A "Ras-related protein Rab-5A" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030139
"endocytic vesicle" evidence=IEA] [GO:0045121 "membrane raft"
evidence=IEA] [GO:0001726 "ruffle" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0031901 "early endosome
membrane" evidence=IEA] [GO:0042470 "melanosome" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006897
"endocytosis" evidence=IDA] [GO:0005525 "GTP binding" evidence=IDA]
[GO:0019003 "GDP binding" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IDA] [GO:0005769 "early endosome" evidence=IDA]
[GO:0045921 "positive regulation of exocytosis" evidence=IMP]
[GO:0051489 "regulation of filopodium assembly" evidence=IDA]
[GO:0007596 "blood coagulation" evidence=TAS] [GO:0010008 "endosome
membrane" evidence=TAS] [GO:2000286 "receptor internalization
involved in canonical Wnt receptor signaling pathway" evidence=IMP]
[GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
Reactome:REACT_604 InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0042470
GO:GO:0007264 GO:GO:0007399 GO:GO:0030154 GO:GO:0031901
EMBL:CH471055 GO:GO:0015629
Pathway_Interaction_DB:p38alphabetadownstreampathway GO:GO:0015031
GO:GO:0007596 GO:GO:0003924 GO:GO:0045121 GO:GO:0010008
GO:GO:0030139 GO:GO:0001726 PROSITE:PS51419 GO:GO:0005769
eggNOG:COG1100 GO:GO:0051489 GO:GO:0019003 GO:GO:0045921
GO:GO:2000286 HOVERGEN:HBG009351 PDB:3MJH PDBsum:3MJH
HOGENOM:HOG000233968 CTD:5868 KO:K07887 OrthoDB:EOG4Z0B6M
OMA:EPQNTGA EMBL:M28215 EMBL:AF464088 EMBL:AF498936 EMBL:AK312618
EMBL:CR536492 EMBL:BC001267 EMBL:BC018288 IPI:IPI00023510
PIR:F34323 RefSeq:NP_004153.2 UniGene:Hs.475663 PDB:1N6H PDB:1N6I
PDB:1N6K PDB:1N6L PDB:1N6N PDB:1N6O PDB:1N6P PDB:1N6R PDB:1R2Q
PDB:1TU3 PDB:1TU4 PDBsum:1N6H PDBsum:1N6I PDBsum:1N6K PDBsum:1N6L
PDBsum:1N6N PDBsum:1N6O PDBsum:1N6P PDBsum:1N6R PDBsum:1R2Q
PDBsum:1TU3 PDBsum:1TU4 ProteinModelPortal:P20339 SMR:P20339
DIP:DIP-380N IntAct:P20339 MINT:MINT-209361 STRING:P20339
PhosphoSite:P20339 DMDM:1346958 PaxDb:P20339 PRIDE:P20339
DNASU:5868 Ensembl:ENST00000273047 GeneID:5868 KEGG:hsa:5868
UCSC:uc003cbn.3 GeneCards:GC03P019963 HGNC:HGNC:9783 HPA:CAB004567
MIM:179512 neXtProt:NX_P20339 PharmGKB:PA34143 InParanoid:P20339
PhylomeDB:P20339 ChiTaRS:RAB5A EvolutionaryTrace:P20339
GenomeRNAi:5868 NextBio:22790 ArrayExpress:P20339 Bgee:P20339
CleanEx:HS_RAB5A Genevestigator:P20339 GermOnline:ENSG00000144566
Uniprot:P20339
Length = 215
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 56/161 (34%), Positives = 88/161 (54%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV++G+ GK++ V R + G+F + E TIG + ++F WDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKN- 131
++ L YY Q AI+++D+T ++ W ++L R NI I L GNK D+ N
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 140
Query: 132 RQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARKL 171
R V ++ + N L + E SAK++ N + F+ +A+KL
Sbjct: 141 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>UNIPROTKB|Q15286 [details] [associations]
symbol:RAB35 "Ras-related protein Rab-35" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0042470 "melanosome" evidence=IEA]
[GO:0016197 "endosomal transport" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0045334 "clathrin-coated endocytic
vesicle" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0008104 "protein localization" evidence=IMP] [GO:0045171
"intercellular bridge" evidence=IDA] [GO:0005905 "coated pit"
evidence=IDA] [GO:0031253 "cell projection membrane" evidence=IDA]
[GO:0005546 "phosphatidylinositol-4,5-bisphosphate binding"
evidence=IDA] [GO:0019003 "GDP binding" evidence=IDA] [GO:0005525
"GTP binding" evidence=IDA] [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0042470 GO:GO:0007264
GO:GO:0008104 GO:GO:0015031 GO:GO:0005768 GO:GO:0003924
GO:GO:0005905 EMBL:CH471054 GO:GO:0016197 GO:GO:0000910
GO:GO:0005546 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
EMBL:AC004812 GO:GO:0045171 HOVERGEN:HBG009351 GO:GO:0045334
PDB:3TW8 PDBsum:3TW8 GO:GO:0031253 HOGENOM:HOG000233968 EMBL:X79781
EMBL:AF498960 EMBL:BT020024 EMBL:CR536486 EMBL:CR541683
EMBL:AK304620 EMBL:AK312538 EMBL:BC015931 IPI:IPI00300096
IPI:IPI00953892 PIR:JC2488 RefSeq:NP_001161078.1 RefSeq:NP_006852.1
UniGene:Hs.524788 ProteinModelPortal:Q15286 SMR:Q15286
IntAct:Q15286 MINT:MINT-1370578 STRING:Q15286 PhosphoSite:Q15286
DMDM:3024525 PaxDb:Q15286 PRIDE:Q15286 DNASU:11021
Ensembl:ENST00000229340 Ensembl:ENST00000534951 GeneID:11021
KEGG:hsa:11021 UCSC:uc001txm.2 CTD:11021 GeneCards:GC12M120532
HGNC:HGNC:9774 MIM:604199 neXtProt:NX_Q15286 PharmGKB:PA34127
InParanoid:Q15286 KO:K07876 OMA:NCDVVNR OrthoDB:EOG4QVCD5
GenomeRNAi:11021 NextBio:41874 ArrayExpress:Q15286 Bgee:Q15286
CleanEx:HS_RAB35 Genevestigator:Q15286 GermOnline:ENSG00000111737
Uniprot:Q15286
Length = 201
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 57/160 (35%), Positives = 86/160 (53%)
Query: 10 DYPS-FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWD 68
DY FKL+I+GD G GK++ + R F Y TIGV+ N K++ WD
Sbjct: 4 DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWD 63
Query: 69 TAGQEKFGGLRDGYY--IHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNK 126
TAGQE+F + YY HG I+++DVT+ ++ NV W ++ + C+++ +L GNK
Sbjct: 64 TAGQERFRTITSTYYRGTHG--VIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNK 121
Query: 127 VDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPF 164
D R+V + F + +Q +E SAK N N E+ F
Sbjct: 122 NDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMF 161
>UNIPROTKB|F2Z4Z0 [details] [associations]
symbol:RAB35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045334 "clathrin-coated endocytic vesicle"
evidence=IEA] [GO:0045171 "intercellular bridge" evidence=IEA]
[GO:0031253 "cell projection membrane" evidence=IEA] [GO:0016197
"endosomal transport" evidence=IEA] [GO:0005905 "coated pit"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0015031 GO:GO:0005905 GO:GO:0016197 GO:GO:0000910
GO:GO:0005546 GO:GO:0045171 GO:GO:0045334 GO:GO:0031253
GeneTree:ENSGT00700000104049 CTD:11021 KO:K07876 OMA:NCDVVNR
EMBL:CU062612 RefSeq:NP_001230220.1 UniGene:Ssc.17391
UniGene:Ssc.99380 ProteinModelPortal:F2Z4Z0 SMR:F2Z4Z0 PRIDE:F2Z4Z0
Ensembl:ENSSSCT00000010847 GeneID:100151805 KEGG:ssc:100151805
Uniprot:F2Z4Z0
Length = 201
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 57/160 (35%), Positives = 86/160 (53%)
Query: 10 DYPS-FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWD 68
DY FKL+I+GD G GK++ + R F Y TIGV+ N K++ WD
Sbjct: 4 DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWD 63
Query: 69 TAGQEKFGGLRDGYY--IHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNK 126
TAGQE+F + YY HG I+++DVT+ ++ NV W ++ + C+++ +L GNK
Sbjct: 64 TAGQERFRTITSTYYRGTHG--VIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNK 121
Query: 127 VDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPF 164
D R+V + F + +Q +E SAK N N E+ F
Sbjct: 122 NDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMF 161
>UNIPROTKB|F2Z560 [details] [associations]
symbol:RAB5C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030139 "endocytic vesicle" evidence=IEA] [GO:0030100
"regulation of endocytosis" evidence=IEA] [GO:0007032 "endosome
organization" evidence=IEA] [GO:0005811 "lipid particle"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0005811 GO:GO:0015031 GO:GO:0030100 GO:GO:0030139
GO:GO:0007032 GeneTree:ENSGT00640000091139 OMA:VDLQESN CTD:5878
KO:K07889 EMBL:CU856598 RefSeq:NP_001231183.1 UniGene:Ssc.19390
UniGene:Ssc.82797 ProteinModelPortal:F2Z560 SMR:F2Z560 PRIDE:F2Z560
Ensembl:ENSSSCT00000018954 GeneID:100523862 KEGG:ssc:100523862
ArrayExpress:F2Z560 Uniprot:F2Z560
Length = 216
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 56/161 (34%), Positives = 89/161 (55%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV++G+ GK++ V R + G+F + E TIG + ++F WDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKN- 131
++ L YY Q AI+++D+T T+ W ++L R NI I L GNK D+ +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASK 141
Query: 132 RQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARKL 171
R V+ ++ + + N L + E SAK+ N + F+ +A+KL
Sbjct: 142 RAVEFQEAQAYAEDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>UNIPROTKB|Q06AU6 [details] [associations]
symbol:RAB5A "Ras-related protein Rab-5A" species:9823 "Sus
scrofa" [GO:0006184 "GTP catabolic process" evidence=ISS]
[GO:0019003 "GDP binding" evidence=ISS] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006897 "endocytosis" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0042470 "melanosome"
evidence=IEA] [GO:0031901 "early endosome membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0001726 "ruffle"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0042470 GO:GO:0007264 GO:GO:0007399 GO:GO:0030154
GO:GO:0031901 GO:GO:0015031 GO:GO:0003924 GO:GO:0006897
GO:GO:0001726 PROSITE:PS51419 GO:GO:0019003 HOVERGEN:HBG009351
CTD:5868 KO:K07887 EMBL:DQ917629 RefSeq:NP_001116652.1
UniGene:Ssc.53977 ProteinModelPortal:Q06AU6 SMR:Q06AU6
GeneID:100144499 KEGG:ssc:100144499 Uniprot:Q06AU6
Length = 215
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 56/161 (34%), Positives = 88/161 (54%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV++G+ GK++ V R + G+F + E TIG + ++F WDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKN- 131
++ L YY Q AI+++D+T ++ W ++L R NI I L GNK D+ N
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 140
Query: 132 RQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARKL 171
R V ++ + N L + E SAK++ N + F+ +A+KL
Sbjct: 141 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>UNIPROTKB|P61271 [details] [associations]
symbol:RAB5A "Ras-related protein Rab-5A" species:9541
"Macaca fascicularis" [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0006184 "GTP catabolic
process" evidence=ISS] [GO:0006897 "endocytosis" evidence=ISS]
[GO:0019003 "GDP binding" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0042470 GO:GO:0007264 GO:GO:0007399 GO:GO:0030154
GO:GO:0031901 GO:GO:0015031 GO:GO:0003924 GO:GO:0006897
GO:GO:0001726 PROSITE:PS51419 GO:GO:0019003 HOVERGEN:HBG009351
EMBL:AB062987 ProteinModelPortal:P61271 PRIDE:P61271 Uniprot:P61271
Length = 215
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 56/161 (34%), Positives = 88/161 (54%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV++G+ GK++ V R + G+F + E TIG + ++F WDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKN- 131
++ L YY Q AI+++D+T ++ W ++L R NI I L GNK D+ N
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 140
Query: 132 RQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARKL 171
R V ++ + N L + E SAK++ N + F+ +A+KL
Sbjct: 141 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>MGI|MGI:1924657 [details] [associations]
symbol:Rab35 "RAB35, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000910 "cytokinesis" evidence=ISO] [GO:0005525
"GTP binding" evidence=ISO] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005768 "endosome"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0005905 "coated pit" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0008104 "protein localization"
evidence=ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016197 "endosomal
transport" evidence=ISO] [GO:0019003 "GDP binding" evidence=ISO]
[GO:0031253 "cell projection membrane" evidence=ISO] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0045171 "intercellular
bridge" evidence=ISO] [GO:0045334 "clathrin-coated endocytic
vesicle" evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:1924657 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0042470 GO:GO:0007264 GO:GO:0015031 GO:GO:0005768
GO:GO:0005905 GO:GO:0016197 GO:GO:0000910 GO:GO:0005546
PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003 GO:GO:0045171
HOVERGEN:HBG009351 GO:GO:0045334 GO:GO:0031253 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104049 CTD:11021 KO:K07876 OMA:NCDVVNR
OrthoDB:EOG4QVCD5 EMBL:BC056466 IPI:IPI00130489 RefSeq:NP_937806.1
UniGene:Mm.27553 ProteinModelPortal:Q6PHN9 SMR:Q6PHN9 IntAct:Q6PHN9
STRING:Q6PHN9 PhosphoSite:Q6PHN9 PaxDb:Q6PHN9 PRIDE:Q6PHN9
Ensembl:ENSMUST00000031492 GeneID:77407 KEGG:mmu:77407
InParanoid:Q6PHN9 ChiTaRS:RAB35 NextBio:346877 Bgee:Q6PHN9
CleanEx:MM_RAB35 Genevestigator:Q6PHN9
GermOnline:ENSMUSG00000029518 Uniprot:Q6PHN9
Length = 201
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 57/160 (35%), Positives = 86/160 (53%)
Query: 10 DYPS-FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWD 68
DY FKL+I+GD G GK++ + R F Y TIGV+ N K++ WD
Sbjct: 4 DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWD 63
Query: 69 TAGQEKFGGLRDGYY--IHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNK 126
TAGQE+F + YY HG I+++DVT+ ++ NV W ++ + C+++ +L GNK
Sbjct: 64 TAGQERFRTITSTYYRGTHG--VIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNK 121
Query: 127 VDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPF 164
D R+V + F + +Q +E SAK N N E+ F
Sbjct: 122 NDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMF 161
>MGI|MGI:105926 [details] [associations]
symbol:Rab5a "RAB5A, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001726 "ruffle" evidence=IDA] [GO:0003924
"GTPase activity" evidence=ISO;IDA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005525 "GTP binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005768 "endosome"
evidence=IDA] [GO:0005769 "early endosome" evidence=ISO;IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0006184 "GTP
catabolic process" evidence=ISO;IDA;TAS] [GO:0006810 "transport"
evidence=IEA] [GO:0006897 "endocytosis" evidence=ISO;IDA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0019001 "guanyl nucleotide binding"
evidence=IDA] [GO:0019003 "GDP binding" evidence=ISO] [GO:0030139
"endocytic vesicle" evidence=IDA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0045121 "membrane raft" evidence=IDA] [GO:0045921 "positive
regulation of exocytosis" evidence=ISO] [GO:0051489 "regulation of
filopodium assembly" evidence=ISO] [GO:2000286 "receptor
internalization involved in canonical Wnt receptor signaling
pathway" evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:105926 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0042470 GO:GO:0007264 GO:GO:0007399 GO:GO:0030154
GO:GO:0031901 GO:GO:0015629 GO:GO:0015031 GO:GO:0003924
GO:GO:0006897 GO:GO:0045121 GO:GO:0030139 GO:GO:0001726
PROSITE:PS51419 GO:GO:0005769 eggNOG:COG1100 GO:GO:0051489
GO:GO:0019003 EMBL:CH466559 GO:GO:0045921 GO:GO:2000286
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00640000091139 CTD:5868 KO:K07887 OrthoDB:EOG4Z0B6M
OMA:EPQNTGA ChiTaRS:RAB5A EMBL:AB232593 EMBL:AK002631 EMBL:AK008198
EMBL:AK010495 EMBL:AK081999 EMBL:AK150296 EMBL:AK150346
EMBL:AK150405 EMBL:AK151066 EMBL:AK153131 EMBL:AK159706
EMBL:BC004842 EMBL:BC034370 EMBL:BC096481 IPI:IPI00132410
RefSeq:NP_080163.1 UniGene:Mm.329123 ProteinModelPortal:Q9CQD1
SMR:Q9CQD1 IntAct:Q9CQD1 STRING:Q9CQD1 PhosphoSite:Q9CQD1
PaxDb:Q9CQD1 PRIDE:Q9CQD1 Ensembl:ENSMUST00000017975 GeneID:271457
KEGG:mmu:271457 InParanoid:Q9CQD1 NextBio:393462 Bgee:Q9CQD1
CleanEx:MM_RAB5A Genevestigator:Q9CQD1
GermOnline:ENSMUSG00000017831 Uniprot:Q9CQD1
Length = 215
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 56/161 (34%), Positives = 88/161 (54%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV++G+ GK++ V R + G+F + E TIG + ++F WDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKN- 131
++ L YY Q AI+++D+T ++ W ++L R NI I L GNK D+ N
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 140
Query: 132 RQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARKL 171
R V ++ + N L + E SAK++ N + F+ +A+KL
Sbjct: 141 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>RGD|1306362 [details] [associations]
symbol:Rab35 "RAB35, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0000910 "cytokinesis" evidence=IEA;ISO]
[GO:0005525 "GTP binding" evidence=ISO;ISS] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=IEA;ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0005768
"endosome" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0005905 "coated pit" evidence=IEA;ISO]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0008104 "protein localization" evidence=ISO]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016197
"endosomal transport" evidence=IEA;ISO] [GO:0019003 "GDP binding"
evidence=ISO;ISS] [GO:0031253 "cell projection membrane"
evidence=IEA;ISO] [GO:0042470 "melanosome" evidence=IEA]
[GO:0045171 "intercellular bridge" evidence=IEA;ISO] [GO:0045334
"clathrin-coated endocytic vesicle" evidence=IEA;ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:1306362 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0042470 GO:GO:0007264
GO:GO:0015031 GO:GO:0005768 GO:GO:0005905 GO:GO:0016197
GO:GO:0000910 GO:GO:0005546 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0019003 GO:GO:0045171 HOVERGEN:HBG009351 GO:GO:0045334
GO:GO:0031253 HOGENOM:HOG000233968 GeneTree:ENSGT00700000104049
CTD:11021 KO:K07876 OrthoDB:EOG4QVCD5 EMBL:BC085769 IPI:IPI00371187
RefSeq:NP_001013064.1 UniGene:Rn.18008 ProteinModelPortal:Q5U316
SMR:Q5U316 STRING:Q5U316 PhosphoSite:Q5U316 PRIDE:Q5U316
Ensembl:ENSRNOT00000030031 GeneID:288700 KEGG:rno:288700
UCSC:RGD:1306362 InParanoid:Q5U316 NextBio:628573
Genevestigator:Q5U316 GermOnline:ENSRNOG00000022014 Uniprot:Q5U316
Length = 201
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 57/160 (35%), Positives = 86/160 (53%)
Query: 10 DYPS-FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWD 68
DY FKL+I+GD G GK++ + R F Y TIGV+ N K++ WD
Sbjct: 4 DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWD 63
Query: 69 TAGQEKFGGLRDGYY--IHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNK 126
TAGQE+F + YY HG I+++DVT+ ++ NV W ++ + C+++ +L GNK
Sbjct: 64 TAGQERFRTITSTYYRGTHG--VIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNK 121
Query: 127 VDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPF 164
D R+V + F + +Q +E SAK N N E+ F
Sbjct: 122 NDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMF 161
>ZFIN|ZDB-GENE-030131-139 [details] [associations]
symbol:rab5aa "RAB5A, member RAS oncogene family,
a" species:7955 "Danio rerio" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-030131-139
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968 HSSP:P20339
GeneTree:ENSGT00640000091139 KO:K07887 OrthoDB:EOG4Z0B6M
OMA:RAVDFQV EMBL:BX950869 EMBL:BC047803 EMBL:BC063966
IPI:IPI00484834 RefSeq:NP_958893.1 UniGene:Dr.7401 SMR:Q7ZUW5
STRING:Q7ZUW5 Ensembl:ENSDART00000034124 Ensembl:ENSDART00000129730
GeneID:337737 KEGG:dre:337737 CTD:337737 InParanoid:Q7ZUW5
NextBio:20812391 Uniprot:Q7ZUW5
Length = 216
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 57/164 (34%), Positives = 88/164 (53%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV++G+ GK++ V R + G+F + E TIG + ++F WDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQE 81
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKN- 131
++ L YY Q AI+++D+T ++ W ++L R NI I L GNK D+ N
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 141
Query: 132 RQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARKLAGS 174
R V + + N L + E SAK++ N + F+ +A+KL S
Sbjct: 142 RAVDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKS 185
>ZFIN|ZDB-GENE-060825-25 [details] [associations]
symbol:zgc:153788 "zgc:153788" species:7955 "Danio
rerio" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-060825-25 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00700000104044 OrthoDB:EOG4WQ13N
KO:K07930 OMA:LIGDCGT EMBL:CR855375 EMBL:BC122421 IPI:IPI00786530
RefSeq:NP_001038812.1 UniGene:Dr.49036 SMR:Q0P3V5
Ensembl:ENSDART00000082517 GeneID:751627 KEGG:dre:751627
InParanoid:Q0P3V5 NextBio:20917779 Uniprot:Q0P3V5
Length = 208
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 62/173 (35%), Positives = 94/173 (54%)
Query: 3 LPSQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKI 62
L S + D FK+V+VGD G GKT V+R TG F +K TIGV+ + ++
Sbjct: 4 LDSDDSYDLV-FKIVLVGDVGVGKTCVVQRFKTGIFIEKQGNTIGVDFTMKTLEIHGKRV 62
Query: 63 RFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIV 121
+ WDTAGQE+F + YY AII +D+T + T+ +VP W D+ + NI +
Sbjct: 63 KLQIWDTAGQERFRTITQSYYRSANGAIITYDITKKATFLSVPKWMEDVKKYGGSNIVPL 122
Query: 122 LCGNKVDV-KNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
L GNK D+ ++R+V + Q H+ + E SAK + N ++ F +A +L
Sbjct: 123 LIGNKCDLSESREVPLEDAQTMAHQLDFVSAIETSAKDSSNVDEAFNKMASEL 175
>UNIPROTKB|F1N908 [details] [associations]
symbol:RAB35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0000910 "cytokinesis"
evidence=IEA] [GO:0005546 "phosphatidylinositol-4,5-bisphosphate
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005905 "coated pit" evidence=IEA] [GO:0016197 "endosomal
transport" evidence=IEA] [GO:0031253 "cell projection membrane"
evidence=IEA] [GO:0045171 "intercellular bridge" evidence=IEA]
[GO:0045334 "clathrin-coated endocytic vesicle" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264 GO:GO:0015031
GO:GO:0005905 GO:GO:0016197 GO:GO:0000910 GO:GO:0005546
GO:GO:0045171 GO:GO:0045334 GO:GO:0031253
GeneTree:ENSGT00700000104049 OMA:NCDVVNR EMBL:AADN02043195
EMBL:AADN02043196 IPI:IPI00651222 Ensembl:ENSGALT00000011828
Uniprot:F1N908
Length = 201
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 57/160 (35%), Positives = 86/160 (53%)
Query: 10 DYPS-FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWD 68
DY FKL+I+GD G GK++ + R F Y TIGV+ N K++ WD
Sbjct: 4 DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGDYITTIGVDFKIRTVEINGEKVKLQIWD 63
Query: 69 TAGQEKFGGLRDGYY--IHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNK 126
TAGQE+F + YY HG I+++DVT+ ++ NV W ++ + C+++ +L GNK
Sbjct: 64 TAGQERFRTITSTYYRGTHG--VIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNK 121
Query: 127 VDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPF 164
D R+V + F + +Q +E SAK N N E+ F
Sbjct: 122 NDDPERKVVETEDAYKFAGQMEIQLFETSAKENINVEEMF 161
>UNIPROTKB|P24409 [details] [associations]
symbol:RAB10 "Ras-related protein Rab-10" species:9615
"Canis lupus familiaris" [GO:0005515 "protein binding"
evidence=IPI] [GO:0019003 "GDP binding" evidence=ISS] [GO:0005525
"GTP binding" evidence=ISS] [GO:0045200 "establishment of
neuroblast polarity" evidence=ISS] [GO:0007409 "axonogenesis"
evidence=ISS] [GO:0006893 "Golgi to plasma membrane transport"
evidence=ISS] [GO:0072659 "protein localization to plasma membrane"
evidence=ISS] [GO:0032869 "cellular response to insulin stimulus"
evidence=ISS] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] [GO:0032593 "insulin-responsive compartment"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0005768 "endosome" evidence=ISS] [GO:0016197 "endosomal
transport" evidence=ISS] [GO:0030859 "polarized epithelial cell
differentiation" evidence=IMP] [GO:0043001 "Golgi to plasma
membrane protein transport" evidence=IMP] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0055037 "recycling endosome"
evidence=IDA] [GO:0005802 "trans-Golgi network" evidence=IDA]
[GO:0000145 "exocyst" evidence=IDA] [GO:0072372 "primary cilium"
evidence=IDA] [GO:0061467 "basolateral protein localization"
evidence=IMP] [GO:0055038 "recycling endosome membrane"
evidence=IEA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0030670 GO:GO:0032869 GO:GO:0016197 GO:GO:0055037
GO:GO:0007409 GO:GO:0005802 GO:GO:0072372 GO:GO:0072659
PROSITE:PS51419 GO:GO:0032593 GO:GO:0043001 GO:GO:0055038
eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351 GO:GO:0045200
GO:GO:0030859 HOGENOM:HOG000233968 EMBL:X56387 PIR:D36364
UniGene:Cfa.3815 ProteinModelPortal:P24409 SMR:P24409 STRING:P24409
PRIDE:P24409 InParanoid:P24409 OrthoDB:EOG4K3KX6 NextBio:20817448
Uniprot:P24409
Length = 200
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 56/174 (32%), Positives = 93/174 (53%)
Query: 5 SQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRF 64
+++T D FKL+++GD G GKT + R F + TIG++ KI+
Sbjct: 2 AKKTYDL-LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 65 YCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLC 123
WDTAGQE+F + YY ++++D+T +++N+ W R++ E++ +L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLL 120
Query: 124 GNKVDVKNRQV--KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGST 175
GNK D+ +++V K K R+ ++++E SAK N N EK FL LA + T
Sbjct: 121 GNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKVNINIEKAFLTLAEDILRKT 174
>UNIPROTKB|C9J592 [details] [associations]
symbol:RAB7A "Ras-related protein Rab-7a" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005770
"late endosome" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA] [GO:0045453
"bone resorption" evidence=IEA] [GO:0048365 "Rac GTPase binding"
evidence=IEA] [GO:0097208 "alveolar lamellar body" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264 GO:GO:0015031
GO:GO:0005770 HOGENOM:HOG000233968 HGNC:HGNC:9788 ChiTaRS:RAB7A
EMBL:AC079945 EMBL:AC023598 EMBL:AC117508 EMBL:AC139617
IPI:IPI00945735 ProteinModelPortal:C9J592 SMR:C9J592 STRING:C9J592
PRIDE:C9J592 Ensembl:ENST00000464496 ArrayExpress:C9J592
Bgee:C9J592 Uniprot:C9J592
Length = 150
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 49/140 (35%), Positives = 79/140 (56%)
Query: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEK 74
K++I+GD G GKT+ + +++ +F +Y+ TIG + + + + WDTAGQE+
Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69
Query: 75 FGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDV 129
F L +Y C +++FDVTA T+K + +W + R EN P V+ GNK+D+
Sbjct: 70 FQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDL 129
Query: 130 KNRQVKAK--QVTFHRKKNL 147
+NRQV K Q + K N+
Sbjct: 130 ENRQVATKRAQAWCYSKNNI 149
>SGD|S000005037 [details] [associations]
symbol:YPT53 "Rab family GTPase" species:4932 "Saccharomyces
cerevisiae" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003924
"GTPase activity" evidence=ISS;IMP;IDA] [GO:0005770 "late endosome"
evidence=IMP] [GO:0006623 "protein targeting to vacuole"
evidence=IMP] [GO:0006897 "endocytosis" evidence=IMP] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 SGD:S000005037 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0007264 GO:GO:0003924 GO:GO:0006897
EMBL:BK006947 GO:GO:0005770 PROSITE:PS51419 EMBL:DQ115393
GO:GO:0006623 EMBL:X85811 eggNOG:COG1100 EMBL:AF458969
EMBL:AF458970 EMBL:AF458971 EMBL:AF458972 EMBL:AF458975
EMBL:AF458976 EMBL:AF458977 EMBL:AF458978 EMBL:AF458979
EMBL:AF458980 EMBL:AF458981 RefSeq:NP_014314.3 GeneID:855639
KEGG:sce:YNL085W RefSeq:NP_014306.3 GeneID:855631 KEGG:sce:YNL093W
KO:K07976 HOGENOM:HOG000233968 GeneTree:ENSGT00640000091139
OrthoDB:EOG47WRXZ EMBL:X76175 EMBL:Z71369 EMBL:AY558420 PIR:S45168
ProteinModelPortal:P36019 SMR:P36019 DIP:DIP-2025N IntAct:P36019
MINT:MINT-384797 STRING:P36019 PaxDb:P36019 PRIDE:P36019
EnsemblFungi:YNL093W CYGD:YNL093w OMA:SIVVRFA NextBio:979842
ArrayExpress:P36019 Genevestigator:P36019 GermOnline:YNL093W
Uniprot:P36019
Length = 220
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 61/169 (36%), Positives = 94/169 (55%)
Query: 13 SFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK-IRFYCWDTAG 71
+ K+V++G+ GK++ V R ++ +F++ EPTIG T GK I+F WDTAG
Sbjct: 12 TIKVVLLGESAVGKSSIVLRFVSDDFKESKEPTIGA-AFLTKRITRDGKVIKFEIWDTAG 70
Query: 72 QEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-RVCENIPIVLCGNKVDV- 129
QE+F L YY + Q A+++FDVT ++ W +L +V +I I L GNK+D+
Sbjct: 71 QERFAPLAPMYYRNAQAALVVFDVTNEGSFYKAQNWVEELHEKVGHDIVIALVGNKMDLL 130
Query: 130 ------KNRQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
+NR +KA V ++NL Y+E SAK+ N + F L K+
Sbjct: 131 NNDDENENRAMKAPAVQNLCERENLLYFEASAKTGENIYQIFQTLGEKV 179
>WB|WBGene00004284 [details] [associations]
symbol:rab-35 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
EMBL:AL117202 HOGENOM:HOG000233968 HSSP:P07560
GeneTree:ENSGT00700000104049 KO:K07876 OMA:NCDVVNR PIR:T31551
RefSeq:NP_499454.1 ProteinModelPortal:Q9U2C3 SMR:Q9U2C3
STRING:Q9U2C3 EnsemblMetazoa:Y47D3A.25.1 EnsemblMetazoa:Y47D3A.25.2
GeneID:176560 KEGG:cel:CELE_Y47D3A.25 UCSC:Y47D3A.25.2 CTD:176560
WormBase:Y47D3A.25 InParanoid:Q9U2C3 NextBio:893084
ArrayExpress:Q9U2C3 Uniprot:Q9U2C3
Length = 209
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 59/175 (33%), Positives = 93/175 (53%)
Query: 8 TVDYPS-FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYC 66
T DY FKL+I+GD G GK++ + R F + Y TIGV+ N +++
Sbjct: 4 TRDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQI 63
Query: 67 WDTAGQEKFGGLRDGYY--IHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCG 124
WDTAGQE+F + YY HG ++++DVT ++ NV W +++ C+++ VL G
Sbjct: 64 WDTAGQERFRTITSTYYRGTHG--VVVVYDVTNGESFGNVKRWLQEIENNCDSVQKVLVG 121
Query: 125 NKVDVKNRQV--KAKQVTFHRKKNLQYYEISAKSNYNFEKPF-----LYLARKLA 172
NK + R+V ++ + + N+ ++E SAK + N E F L L KLA
Sbjct: 122 NKCEENERRVVLESDARNYAQSMNISFFETSAKEDKNVEPMFTCITSLVLTAKLA 176
>ZFIN|ZDB-GENE-040822-15 [details] [associations]
symbol:rab4b "RAB4B, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040822-15 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OrthoDB:EOG4WM4VM CTD:53916 KO:K07880
EMBL:BC080219 IPI:IPI00495099 RefSeq:NP_001004002.1
UniGene:Dr.85594 ProteinModelPortal:Q68EK7 SMR:Q68EK7 PRIDE:Q68EK7
GeneID:445498 KEGG:dre:445498 InParanoid:Q68EK7 NextBio:20832167
Uniprot:Q68EK7
Length = 213
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 55/168 (32%), Positives = 91/168 (54%)
Query: 7 QTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYC 66
+T D+ FK +++G GTGK+ + + + +F++ TIGVE ++
Sbjct: 3 ETYDF-LFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQI 61
Query: 67 WDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGN 125
WDTAGQE+F + YY A++++D+T+R TY + W D + NI I+LCGN
Sbjct: 62 WDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARTLASPNIVIILCGN 121
Query: 126 KVDVK-NRQVKAKQVT-FHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
K D+ +R+V + + F ++ L + E SA + N E+ FL AR +
Sbjct: 122 KKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARSI 169
>DICTYBASE|DDB_G0283757 [details] [associations]
symbol:rab1A "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0283757 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GenomeReviews:CM000153_GR GO:GO:0015031 PROSITE:PS51419
EMBL:AAFI02000057 eggNOG:COG1100 KO:K07874 EMBL:L21009
RefSeq:XP_638915.1 ProteinModelPortal:P34139 SMR:P34139
PRIDE:P34139 EnsemblProtists:DDB0191476 GeneID:8624312
KEGG:ddi:DDB_G0283757 OMA:NRVGPPS ProtClustDB:CLSZ2430337
Uniprot:P34139
Length = 202
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 58/165 (35%), Positives = 91/165 (55%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKL+++GD G GK+ + R + + + TIGV+ N I+ WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWDTAGQE 68
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVKNR 132
+F + YY I+++DVT +LT++NV W +++ R CEN+ +L GNK D+
Sbjct: 69 RFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQWLQEIDRFACENVNKLLVGNKSDL--- 125
Query: 133 QVKAKQVTFHRKK----NLQ--YYEISAKSNYNFEKPFLYLARKL 171
V K V F+ K +LQ + E SAK + N E+ F+ +A ++
Sbjct: 126 -VAKKVVDFNTAKAFADSLQIPFLETSAKQSTNVEQAFMTMATEI 169
>UNIPROTKB|E1BF18 [details] [associations]
symbol:RAB3C "Ras-related protein Rab-3C" species:9913 "Bos
taurus" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00690000101942 EMBL:DAAA02050293
EMBL:DAAA02050288 EMBL:DAAA02050289 EMBL:DAAA02050290
EMBL:DAAA02050291 EMBL:DAAA02050292 IPI:IPI00906126
Ensembl:ENSBTAT00000054286 ArrayExpress:E1BF18 Uniprot:E1BF18
Length = 218
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 51/162 (31%), Positives = 87/162 (53%)
Query: 5 SQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRF 64
S Q DY FKL+I+G+ GKT+F+ R+ F + T+G++ F N +I+
Sbjct: 15 SDQNFDY-MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKL 73
Query: 65 YCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCG 124
WDTAGQE++ + YY I+M+D+T ++ V W + +N ++L G
Sbjct: 74 QIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSLNQTYSWDNAQVILVG 133
Query: 125 NKVDVKNRQVKAKQVTFHRKKNL--QYYEISAKSNYNFEKPF 164
NK D+++ +V + + H + L +++E SAK N N ++ F
Sbjct: 134 NKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTF 175
>UNIPROTKB|E2RRA2 [details] [associations]
symbol:RAB19 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104044 CTD:401409 OMA:RNSLHLY
EMBL:AAEX03010214 RefSeq:XP_539883.1 ProteinModelPortal:E2RRA2
Ensembl:ENSCAFT00000006357 GeneID:482767 KEGG:cfa:482767
NextBio:20857291 Uniprot:E2RRA2
Length = 217
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 57/171 (33%), Positives = 92/171 (53%)
Query: 5 SQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRF 64
+ + DY FK++++GD GKT V+ +G + + + TIGV+ + K++
Sbjct: 10 ADENFDY-LFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLEIDGKKVKM 68
Query: 65 YCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV-CENIPIVLC 123
WDTAGQE+F + YY AII +D+T R T+++VP W ++ + N+ I+L
Sbjct: 69 QVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLI 128
Query: 124 GNKVDV-KNRQVKAKQV-TFHRKKNL-QYYEISAKSNYNFEKPFLYLARKL 171
GNK D+ + R V + T K L E SAK + N ++ F +AR+L
Sbjct: 129 GNKCDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNVDEVFTLMAREL 179
>UNIPROTKB|P51147 [details] [associations]
symbol:RAB5C "Ras-related protein Rab-5C" species:9615
"Canis lupus familiaris" [GO:0019003 "GDP binding" evidence=ISS]
[GO:0042470 "melanosome" evidence=IEA] [GO:0031901 "early endosome
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030139 "endocytic vesicle" evidence=IEA] [GO:0030100
"regulation of endocytosis" evidence=IEA] [GO:0007032 "endosome
organization" evidence=IEA] [GO:0005811 "lipid particle"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0042470 GO:GO:0007264 GO:GO:0031901 GO:GO:0005811
GO:GO:0015031 GO:GO:0030100 GO:GO:0030139 PROSITE:PS51419
GO:GO:0007032 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00640000091139 OrthoDB:EOG4Z0B6M
OMA:VDLQESN CTD:5878 KO:K07889 EMBL:Z27110 PIR:S65933
RefSeq:NP_001003261.1 UniGene:Cfa.3802 ProteinModelPortal:P51147
SMR:P51147 STRING:P51147 PRIDE:P51147 Ensembl:ENSCAFT00000024768
GeneID:403941 KEGG:cfa:403941 InParanoid:P51147 NextBio:20817431
Uniprot:P51147
Length = 216
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 56/161 (34%), Positives = 88/161 (54%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV++G+ GK++ V R + G+F + E TIG + ++F WDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKN- 131
++ L YY Q AI+++D+T T+ W ++L R NI I L GNK D+ +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASK 141
Query: 132 RQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARKL 171
R V+ ++ + N L + E SAK+ N + F+ +A+KL
Sbjct: 142 RAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>UNIPROTKB|P51148 [details] [associations]
symbol:RAB5C "Ras-related protein Rab-5C" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007032 "endosome
organization" evidence=IEA] [GO:0030100 "regulation of endocytosis"
evidence=IEA] [GO:0030139 "endocytic vesicle" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0031901 "early
endosome membrane" evidence=IEA] [GO:0042470 "melanosome"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0019003 "GDP binding" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=TAS] [GO:0006184 "GTP catabolic process"
evidence=TAS] Reactome:REACT_11123 InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0042470 GO:GO:0007264 GO:GO:0031901 GO:GO:0005811
GO:GO:0015031 EMBL:CH471152 GO:GO:0003924 GO:GO:0030100
GO:GO:0030139 PROSITE:PS51419 GO:GO:0007032 eggNOG:COG1100
GO:GO:0019003 HOVERGEN:HBG009351 EMBL:AC105024 EMBL:AC099811
HOGENOM:HOG000233968 OrthoDB:EOG4Z0B6M CTD:5878 KO:K07889
EMBL:U18420 EMBL:U11293 EMBL:AF141304 EMBL:AF498938 EMBL:AK310234
EMBL:CR541901 EMBL:BT019484 EMBL:AC003104 EMBL:BC106039
EMBL:BC114439 IPI:IPI00016339 IPI:IPI01021644 PIR:I38703
RefSeq:NP_001238968.1 RefSeq:NP_004574.2 RefSeq:NP_958842.1
UniGene:Hs.650382 ProteinModelPortal:P51148 SMR:P51148
IntAct:P51148 STRING:P51148 PhosphoSite:P51148 DMDM:38258923
PaxDb:P51148 PeptideAtlas:P51148 PRIDE:P51148 DNASU:5878
Ensembl:ENST00000346213 Ensembl:ENST00000393860
Ensembl:ENST00000547517 Ensembl:ENST00000565751 GeneID:5878
KEGG:hsa:5878 UCSC:uc002hyz.3 GeneCards:GC17M040276 HGNC:HGNC:9785
HPA:HPA003426 MIM:604037 neXtProt:NX_P51148 PharmGKB:PA34145
InParanoid:P51148 PhylomeDB:P51148 GenomeRNAi:5878 NextBio:22840
ArrayExpress:P51148 Bgee:P51148 CleanEx:HS_RAB5C
Genevestigator:P51148 GermOnline:ENSG00000108774 Uniprot:P51148
Length = 216
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 56/161 (34%), Positives = 88/161 (54%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV++G+ GK++ V R + G+F + E TIG + ++F WDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKN- 131
++ L YY Q AI+++D+T T+ W ++L R NI I L GNK D+ +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASK 141
Query: 132 RQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARKL 171
R V+ ++ + N L + E SAK+ N + F+ +A+KL
Sbjct: 142 RAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>UNIPROTKB|F1RG36 [details] [associations]
symbol:RAB4A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030100 "regulation of endocytosis" evidence=IEA]
[GO:0019003 "GDP binding" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0008565 GO:GO:0005768 GO:GO:0003924 GO:GO:0030100
GO:GO:0019003 GeneTree:ENSGT00690000101805 OMA:DESNHTI
EMBL:CU469126 Ensembl:ENSSSCT00000011158 ArrayExpress:F1RG36
Uniprot:F1RG36
Length = 215
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 55/162 (33%), Positives = 91/162 (56%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK-IRFYCWDTAGQ 72
FK +++G+ GTGK+ + + + +F+ TIGVE GK ++ WDTAGQ
Sbjct: 11 FKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGS-KIINVGGKYVKLQIWDTAGQ 69
Query: 73 EKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVDVK- 130
E+F + YY A++++D+T+R TY + W D + +NI I+LCGNK D+
Sbjct: 70 ERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDA 129
Query: 131 NRQVKAKQVT-FHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
+R+V + + F ++ L + E SA + N E+ F+ ARK+
Sbjct: 130 DREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKI 171
>UNIPROTKB|Q5R7L7 [details] [associations]
symbol:RAB5C "Ras-related protein Rab-5C" species:9601
"Pongo abelii" [GO:0019003 "GDP binding" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0031901
GO:GO:0005811 GO:GO:0015031 PROSITE:PS51419 GO:GO:0019003
HOVERGEN:HBG009351 HSSP:P35278 GeneTree:ENSGT00640000091139
OMA:VDLQESN CTD:5878 KO:K07889 EMBL:CR860097 RefSeq:NP_001127529.1
UniGene:Pab.17478 ProteinModelPortal:Q5R7L7 SMR:Q5R7L7 PRIDE:Q5R7L7
Ensembl:ENSPPYT00000009823 GeneID:100174605 KEGG:pon:100174605
InParanoid:Q5R7L7 Uniprot:Q5R7L7
Length = 216
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 56/161 (34%), Positives = 88/161 (54%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV++G+ GK++ V R + G+F + E TIG + ++F WDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKN- 131
++ L YY Q AI+++D+T T+ W ++L R NI I L GNK D+ +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASK 141
Query: 132 RQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARKL 171
R V+ ++ + N L + E SAK+ N + F+ +A+KL
Sbjct: 142 RAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>MGI|MGI:105306 [details] [associations]
symbol:Rab5c "RAB5C, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
[GO:0005811 "lipid particle" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=TAS] [GO:0006810 "transport" evidence=IEA] [GO:0007032
"endosome organization" evidence=IDA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0019003 "GDP binding" evidence=ISO] [GO:0030100 "regulation of
endocytosis" evidence=IDA] [GO:0030139 "endocytic vesicle"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:105306 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0042470 GO:GO:0007264 GO:GO:0031901 GO:GO:0015031
GO:GO:0003924 GO:GO:0030100 GO:GO:0030139 PROSITE:PS51419
GO:GO:0007032 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OrthoDB:EOG4Z0B6M CTD:5878 KO:K07889
EMBL:BC023027 EMBL:BC027378 EMBL:BC029678 EMBL:M79312
IPI:IPI00224518 PIR:JH0641 RefSeq:NP_077776.2 UniGene:Mm.29829
PDB:1HUQ PDB:1Z07 PDB:1Z0D PDBsum:1HUQ PDBsum:1Z07 PDBsum:1Z0D
ProteinModelPortal:P35278 SMR:P35278 IntAct:P35278 STRING:P35278
PhosphoSite:P35278 PaxDb:P35278 PRIDE:P35278
Ensembl:ENSMUST00000107364 GeneID:19345 KEGG:mmu:19345
EvolutionaryTrace:P35278 NextBio:296361 Bgee:P35278
CleanEx:MM_RAB5C Genevestigator:P35278
GermOnline:ENSMUSG00000019173 Uniprot:P35278
Length = 216
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 56/161 (34%), Positives = 88/161 (54%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV++G+ GK++ V R + G+F + E TIG + ++F WDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKN- 131
++ L YY Q AI+++D+T T+ W ++L R NI I L GNK D+ +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASK 141
Query: 132 RQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARKL 171
R V+ ++ + N L + E SAK+ N + F+ +A+KL
Sbjct: 142 RAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>POMBASE|SPAC6F6.15 [details] [associations]
symbol:ypt5 "GTPase Ypt5" species:4896
"Schizosaccharomyces pombe" [GO:0003924 "GTPase activity"
evidence=ISO] [GO:0005525 "GTP binding" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005770 "late endosome" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006897 "endocytosis" evidence=ISO] [GO:0006995
"cellular response to nitrogen starvation" evidence=IMP]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IC] [GO:0031338 "regulation of vesicle fusion"
evidence=IMP] [GO:0033157 "regulation of intracellular protein
transport" evidence=IC] [GO:0070314 "G1 to G0 transition"
evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
PomBase:SPAC6F6.15 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0005886 GO:GO:0005634 GO:GO:0007264 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0015031 GO:GO:0003924 GO:GO:0006897
GO:GO:0005770 PROSITE:PS51419 GO:GO:0006995 eggNOG:COG1100
GO:GO:0070314 KO:K07976 GO:GO:0033157 HOGENOM:HOG000233968
OMA:GTQGKIC GO:GO:0031338 OrthoDB:EOG4S1XHJ EMBL:Z22220 PIR:A47733
PIR:S34729 RefSeq:NP_593907.1 ProteinModelPortal:P36586 SMR:P36586
STRING:P36586 PRIDE:P36586 EnsemblFungi:SPAC6F6.15.1 GeneID:2542248
KEGG:spo:SPAC6F6.15 NextBio:20803313 Uniprot:P36586
Length = 211
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 58/165 (35%), Positives = 93/165 (56%)
Query: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGV----EVHPLDFFTNCGKIRFYCWDTA 70
KLV++GD GK++ V R + +F+ E TIG + P+D T+ ++ WDTA
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTS---VKLEIWDTA 72
Query: 71 GQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVDV 129
GQE++ L YY + CAI+++D+T + + +W ++L R E I I L GNK+D+
Sbjct: 73 GQERYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDL 132
Query: 130 --KNRQV-KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
+ R V KA + + NL ++E SAK+ N + F +A+KL
Sbjct: 133 AQERRAVEKADAEAYAAEANLLFFETSAKTAENVNELFTAIAKKL 177
>RGD|2319287 [details] [associations]
symbol:LOC100361891 "RAB5A, member RAS oncogene family-like"
species:10116 "Rattus norvegicus" [GO:0001726 "ruffle"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=ISO]
[GO:0005525 "GTP binding" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005768 "endosome" evidence=ISO] [GO:0005769
"early endosome" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006184 "GTP catabolic process" evidence=ISO]
[GO:0006897 "endocytosis" evidence=ISO] [GO:0015629 "actin
cytoskeleton" evidence=ISO] [GO:0019001 "guanyl nucleotide binding"
evidence=ISO] [GO:0019003 "GDP binding" evidence=ISO] [GO:0030139
"endocytic vesicle" evidence=ISO] [GO:0045121 "membrane raft"
evidence=ISO] [GO:0045921 "positive regulation of exocytosis"
evidence=ISO] [GO:0051489 "regulation of filopodium assembly"
evidence=ISO] [GO:2000286 "receptor internalization involved in
canonical Wnt receptor signaling pathway" evidence=ISO]
REFSEQ:XM_003751377 Ncbi:XP_003751425
Length = 215
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 56/161 (34%), Positives = 87/161 (54%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV++G+ GK++ V R + G+F + E TIG + ++F WDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKN- 131
++ L YY Q AI+++D+T ++ W ++L R NI I L GNK D+ N
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFSRAKNWVKELQRQASPNIVIALSGNKADLANK 140
Query: 132 RQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARKL 171
R V ++ + N L + E SAK+ N + F+ +A+KL
Sbjct: 141 RAVDFQEAQSYADDNSLLFMETSAKTPMNVNEIFMAIAKKL 181
>WB|WBGene00004266 [details] [associations]
symbol:rab-1 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0006915
GO:GO:0007264 GO:GO:0002119 GO:GO:0015031 GO:GO:0018996
GO:GO:0040011 GO:GO:0048477 HOGENOM:HOG000233968 HSSP:P07560
GeneTree:ENSGT00700000104049 KO:K07874 OMA:NRVGPPS EMBL:FO080829
PIR:T33781 RefSeq:NP_503397.1 ProteinModelPortal:Q9UAQ6 SMR:Q9UAQ6
DIP:DIP-24638N IntAct:Q9UAQ6 MINT:MINT-1101433 STRING:Q9UAQ6
EnsemblMetazoa:C39F7.4.1 EnsemblMetazoa:C39F7.4.2 GeneID:178620
KEGG:cel:CELE_C39F7.4 UCSC:C39F7.4.1 CTD:178620 WormBase:C39F7.4
InParanoid:Q9UAQ6 NextBio:901876 ArrayExpress:Q9UAQ6 Uniprot:Q9UAQ6
Length = 205
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 54/165 (32%), Positives = 89/165 (53%)
Query: 10 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 69
DY FKL+++GD G GK+ + R + + Y TIGV+ + I+ WDT
Sbjct: 9 DY-LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 70 AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVD 128
AGQE+F + YY I+++D+T + T+ NV W +++ R CEN+ +L GNK D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACENVNKLLVGNKCD 127
Query: 129 VKNRQVKAKQVT--FHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
+ ++ Q + + + + E SAKS+ N E+ FL +A ++
Sbjct: 128 LTAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEI 172
>ZFIN|ZDB-GENE-030826-30 [details] [associations]
symbol:rab13 "RAB13, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-030826-30 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 GO:GO:0001525 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 HSSP:P07560 CTD:5872
GeneTree:ENSGT00700000104031 KO:K06109 OrthoDB:EOG4BVRVS
OMA:AMGIVLI EMBL:BX004983 EMBL:BC053195 IPI:IPI00509437
RefSeq:NP_958486.1 UniGene:Dr.20822 SMR:Q7T3A4
Ensembl:ENSDART00000046922 GeneID:373105 KEGG:dre:373105
InParanoid:Q7T3A4 NextBio:20813372 Uniprot:Q7T3A4
Length = 200
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 49/161 (30%), Positives = 85/161 (52%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKL+++GD G GKT + R F Y TIG++ K++ WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIEVEGKKVKLQVWDTAGQE 68
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVKNR 132
+F + YY I+++D+T +Y+N+ W + + + +L GNK D++ +
Sbjct: 69 RFKTITTAYYRGAMGIILVYDITDEKSYENIQNWMKSIKENASAGVSRMLLGNKCDIEAK 128
Query: 133 QVKAKQV--TFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
+ +K+ ++ ++++E SAKS+ N E+ F LAR +
Sbjct: 129 RKVSKETGEKLAKEHGIRFFETSAKSSINVEESFTSLARDI 169
>ZFIN|ZDB-GENE-040122-3 [details] [associations]
symbol:rab5ab "RAB5A, member RAS oncogene family, b"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040122-3 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 HSSP:P20339
GeneTree:ENSGT00640000091139 KO:K07887 OrthoDB:EOG4Z0B6M
OMA:EPQNTGA EMBL:CR848668 EMBL:BC049057 IPI:IPI00511527
RefSeq:NP_957264.1 UniGene:Dr.77063 SMR:Q7ZUG4 STRING:Q7ZUG4
Ensembl:ENSDART00000015694 GeneID:393945 KEGG:dre:393945 CTD:393945
InParanoid:Q7ZUG4 NextBio:20814917 Uniprot:Q7ZUG4
Length = 216
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 54/161 (33%), Positives = 88/161 (54%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV++G+ GK++ V R + G+F + E TIG + ++F WDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQE 81
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKNR 132
++ L YY Q AI+++D+T ++ W ++L R NI I L GNK D+ N+
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADLANK 141
Query: 133 QVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
+ Q ++ +L + E SAK++ N + F+ +A+KL
Sbjct: 142 RALDFQDAQSYADDNSLLFMETSAKTSMNVSEIFMAIAKKL 182
>ZFIN|ZDB-GENE-040525-1 [details] [associations]
symbol:rab4a "RAB4a, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040525-1 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00690000101805 CTD:5867
KO:K07879 OrthoDB:EOG4WM4VM EMBL:BC056535 IPI:IPI00487840
RefSeq:NP_001119853.1 UniGene:Dr.159894 ProteinModelPortal:Q6PHI9
SMR:Q6PHI9 STRING:Q6PHI9 PRIDE:Q6PHI9 Ensembl:ENSDART00000004420
GeneID:403031 KEGG:dre:403031 InParanoid:Q6PHI9 OMA:DESNHTI
NextBio:20816834 ArrayExpress:Q6PHI9 Bgee:Q6PHI9 Uniprot:Q6PHI9
Length = 213
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 56/169 (33%), Positives = 94/169 (55%)
Query: 7 QTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK-IRFY 65
+T D+ FK +++G+ GTGK+ + + + F+ TIGVE + K ++
Sbjct: 3 ETYDF-LFKFLVIGNAGTGKSCLLHQFIEKRFKDDSNHTIGVEFGS-KIISVVNKFVKLQ 60
Query: 66 CWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCG 124
WDTAGQE+F + YY A++++D+T+R TY + W D + +NI I+LCG
Sbjct: 61 IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCG 120
Query: 125 NKVDVK-NRQVKAKQVT-FHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
NK D+ +R+V + + F ++ L + E SA + N E+ F+ ARK+
Sbjct: 121 NKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKI 169
>UNIPROTKB|Q5ZJN2 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0055038 "recycling endosome membrane"
evidence=IEA] [GO:0000910 "cytokinesis" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005802 "trans-Golgi network" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0043234 "protein
complex" evidence=IEA] [GO:0072659 "protein localization to plasma
membrane" evidence=IEA] [GO:0032154 "cleavage furrow" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886 GO:GO:0007264
GO:GO:0043234 GO:GO:0016192 GO:GO:0015031 GO:GO:0003924
GO:GO:0007049 GO:GO:0000910 GO:GO:0005802 GO:GO:0072659
PROSITE:PS51419 GO:GO:0032154 GO:GO:0055038 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 OMA:AMGTRDD
GeneTree:ENSGT00690000101664 CTD:8766 KO:K07904 OrthoDB:EOG4RR6J7
EMBL:AJ720402 IPI:IPI00585570 RefSeq:NP_001005827.1
UniGene:Gga.5322 ProteinModelPortal:Q5ZJN2 SMR:Q5ZJN2 STRING:Q5ZJN2
PRIDE:Q5ZJN2 Ensembl:ENSGALT00000012312 GeneID:415544
KEGG:gga:415544 InParanoid:Q5ZJN2 NextBio:20819128 Uniprot:Q5ZJN2
Length = 216
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 56/158 (35%), Positives = 84/158 (53%)
Query: 10 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 69
DY FK+V++GD G GK+ + R EF + + TIGVE + I+ WDT
Sbjct: 9 DY-LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 70 AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVD 128
AGQE++ + YY A++++D+ LTY+NV W ++L + NI I+L GNK D
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 127
Query: 129 VKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 164
+++ R V + F K L + E SA + N E F
Sbjct: 128 LRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAF 165
>UNIPROTKB|F2Z4D5 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9913
"Bos taurus" [GO:0072659 "protein localization to plasma membrane"
evidence=IEA] [GO:0055037 "recycling endosome" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0032154 "cleavage
furrow" evidence=IEA] [GO:0031175 "neuron projection development"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0005802 "trans-Golgi network" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0000910 "cytokinesis" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0043234 GO:GO:0016192 GO:GO:0015031 GO:GO:0003924
GO:GO:0055037 GO:GO:0000910 GO:GO:0005802 GO:GO:0072659
GO:GO:0031175 GO:GO:0032154 OMA:AMGTRDD
GeneTree:ENSGT00690000101664 IPI:IPI00695221 UniGene:Bt.44630
EMBL:DAAA02027871 ProteinModelPortal:F2Z4D5 SMR:F2Z4D5 PRIDE:F2Z4D5
Ensembl:ENSBTAT00000025235 Uniprot:F2Z4D5
Length = 216
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 56/158 (35%), Positives = 84/158 (53%)
Query: 10 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 69
DY FK+V++GD G GK+ + R EF + + TIGVE + I+ WDT
Sbjct: 9 DY-LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 70 AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVD 128
AGQE++ + YY A++++D+ LTY+NV W ++L + NI I+L GNK D
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 127
Query: 129 VKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 164
+++ R V + F K L + E SA + N E F
Sbjct: 128 LRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAF 165
>UNIPROTKB|Q3ZC27 [details] [associations]
symbol:RAB19 "Ras-related protein Rab-19" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00700000104044 EMBL:BC102961
IPI:IPI00714195 RefSeq:NP_001030212.1 UniGene:Bt.49611
ProteinModelPortal:Q3ZC27 PRIDE:Q3ZC27 Ensembl:ENSBTAT00000016258
GeneID:506911 KEGG:bta:506911 CTD:401409 InParanoid:Q3ZC27
OMA:RNSLHLY OrthoDB:EOG4WQ13N NextBio:20867797 Uniprot:Q3ZC27
Length = 217
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 56/169 (33%), Positives = 92/169 (54%)
Query: 7 QTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYC 66
+ DY FK++++GD GKT V+ +G + + + TIGV+ + K++
Sbjct: 12 ENFDY-LFKIILIGDSNVGKTCVVQHFKSGVYMEAQQNTIGVDFTVRALEIDGKKVKMQV 70
Query: 67 WDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV-CENIPIVLCGN 125
WDTAGQE+F + YY AII +D+T R T+++VP W ++ + N+ I+L GN
Sbjct: 71 WDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGN 130
Query: 126 KVDV-KNRQVKAKQVTFHRKKN--LQYYEISAKSNYNFEKPFLYLARKL 171
K D+ + R V + +K L E SAK + N ++ F+ +AR+L
Sbjct: 131 KCDLWEKRHVLFEDACILAEKYGLLAVLETSAKESKNIDEVFVLMAREL 179
>UNIPROTKB|P62490 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9615
"Canis lupus familiaris" [GO:0045335 "phagocytic vesicle"
evidence=ISS] [GO:0055037 "recycling endosome" evidence=ISS]
[GO:0032402 "melanosome transport" evidence=ISS] [GO:0072659
"protein localization to plasma membrane" evidence=ISS] [GO:0031175
"neuron projection development" evidence=ISS] [GO:0032154 "cleavage
furrow" evidence=ISS] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0055038 "recycling endosome membrane" evidence=IEA] [GO:0030670
"phagocytic vesicle membrane" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005802
"trans-Golgi network" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0000910 "cytokinesis" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886 GO:GO:0007264
GO:GO:0043234 GO:GO:0016192 GO:GO:0015031 GO:GO:0003924
GO:GO:0055037 GO:GO:0007049 GO:GO:0000910 GO:GO:0005802
GO:GO:0072659 PROSITE:PS51419 GO:GO:0031175 GO:GO:0032154
GO:GO:0055038 eggNOG:COG1100 GO:GO:0032402 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OMA:AMGTRDD GeneTree:ENSGT00690000101664
CTD:8766 KO:K07904 OrthoDB:EOG4RR6J7 EMBL:X56388 PIR:E36364
RefSeq:NP_001003276.1 UniGene:Cfa.3814 UniGene:Cfa.45017
ProteinModelPortal:P62490 SMR:P62490 IntAct:P62490
MINT:MINT-4131822 STRING:P62490 PRIDE:P62490
Ensembl:ENSCAFT00000027321 GeneID:403957 KEGG:cfa:403957
InParanoid:P62490 NextBio:20817447 Uniprot:P62490
Length = 216
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 56/158 (35%), Positives = 84/158 (53%)
Query: 10 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 69
DY FK+V++GD G GK+ + R EF + + TIGVE + I+ WDT
Sbjct: 9 DY-LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 70 AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVD 128
AGQE++ + YY A++++D+ LTY+NV W ++L + NI I+L GNK D
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 127
Query: 129 VKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 164
+++ R V + F K L + E SA + N E F
Sbjct: 128 LRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAF 165
>UNIPROTKB|P62491 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0030133 "transport vesicle" evidence=IEA] [GO:0048169
"regulation of long-term neuronal synaptic plasticity"
evidence=IEA] [GO:0051223 "regulation of protein transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030670 "phagocytic vesicle membrane" evidence=IEA] [GO:0055038
"recycling endosome membrane" evidence=IEA] [GO:0019905 "syntaxin
binding" evidence=NAS] [GO:0048227 "plasma membrane to endosome
transport" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0032154 "cleavage furrow" evidence=IDA]
[GO:0000910 "cytokinesis" evidence=IMP] [GO:0003924 "GTPase
activity" evidence=IDA] [GO:0031175 "neuron projection development"
evidence=IMP] [GO:0072659 "protein localization to plasma membrane"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0016192 "vesicle-mediated transport" evidence=IDA] [GO:0032402
"melanosome transport" evidence=ISS] [GO:0055037 "recycling
endosome" evidence=ISS] [GO:0045335 "phagocytic vesicle"
evidence=IDA] [GO:0005802 "trans-Golgi network" evidence=IDA]
[GO:0006833 "water transport" evidence=TAS] [GO:0030659
"cytoplasmic vesicle membrane" evidence=TAS] [GO:0055085
"transmembrane transport" evidence=TAS] Reactome:REACT_15518
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886 GO:GO:0007264
GO:GO:0043234 GO:GO:0015031 GO:GO:0003924 GO:GO:0055085
GO:GO:0019905 GO:GO:0055037 GO:GO:0007049 GO:GO:0000910
GO:GO:0030659 GO:GO:0005802 GO:GO:0006833 GO:GO:0072659
PROSITE:PS51419 GO:GO:0030133 Pathway_Interaction_DB:txa2pathway
GO:GO:0031175 EMBL:CH471082 GO:GO:0048169 GO:GO:0032154
GO:GO:0051223 GO:GO:0055038 eggNOG:COG1100
Pathway_Interaction_DB:arf6downstreampathway GO:GO:0032402
HOVERGEN:HBG009351 HOGENOM:HOG000233968 OMA:AMGTRDD CTD:8766
KO:K07904 OrthoDB:EOG4RR6J7 EMBL:X53143 EMBL:X56740 EMBL:AF000231
EMBL:AF498946 EMBL:CR407669 EMBL:CR536493 EMBL:BT020151
EMBL:BT020154 EMBL:AK311770 EMBL:BC013348 IPI:IPI00429190
PIR:S47169 RefSeq:NP_001193765.1 RefSeq:NP_004654.1
UniGene:Hs.321541 PDB:1OIV PDB:1OIW PDB:1OIX PDB:1YZK PDB:2D7C
PDB:2GZD PDB:2GZH PDB:2HV8 PDBsum:1OIV PDBsum:1OIW PDBsum:1OIX
PDBsum:1YZK PDBsum:2D7C PDBsum:2GZD PDBsum:2GZH PDBsum:2HV8
ProteinModelPortal:P62491 SMR:P62491 DIP:DIP-29138N IntAct:P62491
MINT:MINT-1434585 STRING:P62491 PhosphoSite:P62491 DMDM:50402542
OGP:P62491 PaxDb:P62491 PRIDE:P62491 DNASU:8766
Ensembl:ENST00000261890 GeneID:8766 KEGG:hsa:8766 UCSC:uc002apk.3
GeneCards:GC15P066018 HGNC:HGNC:9760 HPA:CAB013097 MIM:605570
neXtProt:NX_P62491 PharmGKB:PA34101 InParanoid:P62491
PhylomeDB:P62491 EvolutionaryTrace:P62491 GenomeRNAi:8766
NextBio:32876 ArrayExpress:P62491 Bgee:P62491 CleanEx:HS_RAB11A
Genevestigator:P62491 GermOnline:ENSG00000103769 GO:GO:0048227
Uniprot:P62491
Length = 216
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 56/158 (35%), Positives = 84/158 (53%)
Query: 10 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 69
DY FK+V++GD G GK+ + R EF + + TIGVE + I+ WDT
Sbjct: 9 DY-LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 70 AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVD 128
AGQE++ + YY A++++D+ LTY+NV W ++L + NI I+L GNK D
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 127
Query: 129 VKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 164
+++ R V + F K L + E SA + N E F
Sbjct: 128 LRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAF 165
>UNIPROTKB|Q52NJ1 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9823
"Sus scrofa" [GO:0045335 "phagocytic vesicle" evidence=ISS]
[GO:0055037 "recycling endosome" evidence=ISS] [GO:0032402
"melanosome transport" evidence=ISS] [GO:0072659 "protein
localization to plasma membrane" evidence=ISS] [GO:0031175 "neuron
projection development" evidence=ISS] [GO:0032154 "cleavage furrow"
evidence=ISS] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0055038 "recycling endosome membrane" evidence=IEA] [GO:0030670
"phagocytic vesicle membrane" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005802
"trans-Golgi network" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0000910 "cytokinesis" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886 GO:GO:0007264
GO:GO:0043234 GO:GO:0016192 GO:GO:0015031 GO:GO:0003924
GO:GO:0055037 GO:GO:0007049 GO:GO:0000910 GO:GO:0005802
GO:GO:0072659 PROSITE:PS51419 GO:GO:0031175 GO:GO:0032154
GO:GO:0055038 eggNOG:COG1100 GO:GO:0032402 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OMA:AMGTRDD GeneTree:ENSGT00690000101664
CTD:8766 KO:K07904 OrthoDB:EOG4RR6J7 EMBL:AY996814
RefSeq:NP_001026958.1 UniGene:Ssc.951 ProteinModelPortal:Q52NJ1
SMR:Q52NJ1 PRIDE:Q52NJ1 Ensembl:ENSSSCT00000024720 GeneID:595117
KEGG:ssc:595117 Uniprot:Q52NJ1
Length = 216
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 56/158 (35%), Positives = 84/158 (53%)
Query: 10 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 69
DY FK+V++GD G GK+ + R EF + + TIGVE + I+ WDT
Sbjct: 9 DY-LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 70 AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVD 128
AGQE++ + YY A++++D+ LTY+NV W ++L + NI I+L GNK D
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 127
Query: 129 VKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 164
+++ R V + F K L + E SA + N E F
Sbjct: 128 LRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAF 165
>UNIPROTKB|P62493 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9986
"Oryctolagus cuniculus" [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0031175 "neuron projection development" evidence=ISS]
[GO:0032154 "cleavage furrow" evidence=ISS] [GO:0032402 "melanosome
transport" evidence=ISS] [GO:0045335 "phagocytic vesicle"
evidence=ISS] [GO:0055037 "recycling endosome" evidence=ISS]
[GO:0072659 "protein localization to plasma membrane" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886 GO:GO:0007264
GO:GO:0043234 GO:GO:0016192 GO:GO:0015031 GO:GO:0003924
GO:GO:0055037 GO:GO:0007049 GO:GO:0000910 GO:GO:0005802
GO:GO:0072659 PROSITE:PS51419 GO:GO:0031175 GO:GO:0032154
GO:GO:0055038 eggNOG:COG1100 GO:GO:0032402 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OMA:AMGTRDD GeneTree:ENSGT00690000101664
CTD:8766 OrthoDB:EOG4RR6J7 EMBL:L19260 RefSeq:NP_001075720.1
UniGene:Ocu.1602 ProteinModelPortal:P62493 SMR:P62493
MINT:MINT-95772 STRING:P62493 PRIDE:P62493
Ensembl:ENSOCUT00000014754 GeneID:100009072 ChEMBL:CHEMBL1075143
Uniprot:P62493
Length = 216
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 56/158 (35%), Positives = 84/158 (53%)
Query: 10 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 69
DY FK+V++GD G GK+ + R EF + + TIGVE + I+ WDT
Sbjct: 9 DY-LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 70 AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVD 128
AGQE++ + YY A++++D+ LTY+NV W ++L + NI I+L GNK D
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 127
Query: 129 VKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 164
+++ R V + F K L + E SA + N E F
Sbjct: 128 LRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAF 165
>UNIPROTKB|Q5R9M7 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9601
"Pongo abelii" [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0031175 "neuron projection development" evidence=ISS]
[GO:0032154 "cleavage furrow" evidence=ISS] [GO:0032402 "melanosome
transport" evidence=ISS] [GO:0045335 "phagocytic vesicle"
evidence=ISS] [GO:0055037 "recycling endosome" evidence=ISS]
[GO:0072659 "protein localization to plasma membrane" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886 GO:GO:0007264
GO:GO:0043234 GO:GO:0016192 GO:GO:0015031 GO:GO:0003924
GO:GO:0055037 GO:GO:0007049 GO:GO:0000910 GO:GO:0005802
GO:GO:0072659 PROSITE:PS51419 GO:GO:0031175 GO:GO:0032154
GO:GO:0055038 GO:GO:0032402 HOVERGEN:HBG009351 OMA:AMGTRDD
GeneTree:ENSGT00690000101664 CTD:8766 KO:K07904 EMBL:CR859359
RefSeq:NP_001127429.1 UniGene:Pab.4950 ProteinModelPortal:Q5R9M7
SMR:Q5R9M7 PRIDE:Q5R9M7 Ensembl:ENSPPYT00000007758 GeneID:100174499
KEGG:pon:100174499 InParanoid:Q5R9M7 Uniprot:Q5R9M7
Length = 216
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 56/158 (35%), Positives = 84/158 (53%)
Query: 10 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 69
DY FK+V++GD G GK+ + R EF + + TIGVE + I+ WDT
Sbjct: 9 DY-LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 70 AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVD 128
AGQE++ + YY A++++D+ LTY+NV W ++L + NI I+L GNK D
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 127
Query: 129 VKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 164
+++ R V + F K L + E SA + N E F
Sbjct: 128 LRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAF 165
>MGI|MGI:1858202 [details] [associations]
symbol:Rab11a "RAB11a, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000910 "cytokinesis" evidence=ISO] [GO:0003924
"GTPase activity" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005525 "GTP binding" evidence=ISO] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005768 "endosome" evidence=IEA] [GO:0005802 "trans-Golgi
network" evidence=ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=ISO] [GO:0006810
"transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=ISO] [GO:0030133 "transport vesicle"
evidence=ISO] [GO:0030424 "axon" evidence=IDA] [GO:0031175 "neuron
projection development" evidence=ISO] [GO:0032154 "cleavage furrow"
evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045335 "phagocytic vesicle" evidence=ISO] [GO:0045773
"positive regulation of axon extension" evidence=IMP] [GO:0048169
"regulation of long-term neuronal synaptic plasticity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0051223 "regulation of protein transport"
evidence=ISO] [GO:0055037 "recycling endosome" evidence=ISO;IDA]
[GO:0072659 "protein localization to plasma membrane" evidence=ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:1858202
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0007264 GO:GO:0043234 GO:GO:0016192 GO:GO:0015031
GO:GO:0003924 GO:GO:0055037 GO:GO:0007049 GO:GO:0000910
GO:GO:0005802 GO:GO:0072659 PROSITE:PS51419 GO:GO:0030133
GO:GO:0031175 GO:GO:0048169 GO:GO:0032154 GO:GO:0051223
GO:GO:0055038 eggNOG:COG1100 GO:GO:0032402 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OMA:AMGTRDD CTD:8766 KO:K07904
OrthoDB:EOG4RR6J7 EMBL:AF127669 EMBL:AK014268 EMBL:AK132072
EMBL:AK132159 EMBL:AK147122 EMBL:BC010722 IPI:IPI00323897
RefSeq:NP_059078.2 UniGene:Mm.1387 ProteinModelPortal:P62492
SMR:P62492 IntAct:P62492 STRING:P62492 PhosphoSite:P62492
PaxDb:P62492 PRIDE:P62492 Ensembl:ENSMUST00000172298 GeneID:53869
KEGG:mmu:53869 InParanoid:P62492 NextBio:310717 Bgee:P62492
CleanEx:MM_RAB11A Genevestigator:P62492
GermOnline:ENSMUSG00000004771 Uniprot:P62492
Length = 216
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 56/158 (35%), Positives = 84/158 (53%)
Query: 10 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 69
DY FK+V++GD G GK+ + R EF + + TIGVE + I+ WDT
Sbjct: 9 DY-LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 70 AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVD 128
AGQE++ + YY A++++D+ LTY+NV W ++L + NI I+L GNK D
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 127
Query: 129 VKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 164
+++ R V + F K L + E SA + N E F
Sbjct: 128 LRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAF 165
>RGD|1562951 [details] [associations]
symbol:Rab9b "RAB9B, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0019003 "GDP binding" evidence=ISO] [GO:0045335 "phagocytic
vesicle" evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:1562951 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 OrthoDB:EOG4R7VBS CTD:51209 KO:K07900 OMA:CCPYFET
EMBL:CH474076 IPI:IPI00195994 RefSeq:NP_001102488.1
UniGene:Rn.43853 Ensembl:ENSRNOT00000003300 GeneID:367915
KEGG:rno:367915 UCSC:RGD:1562951 NextBio:691848 Uniprot:D3ZP15
Length = 201
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 54/164 (32%), Positives = 86/164 (52%)
Query: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEK 74
K++++GDGG GK++ + R++T +F+ + TIGVE D + + WDTAGQE+
Sbjct: 9 KVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQER 68
Query: 75 FGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVDV 129
F LR +Y C ++ F V R +++N+ W ++ E+ P V+ GNKVD
Sbjct: 69 FKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLGNKVDK 128
Query: 130 KNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
++RQV + Q N Y E SAK + N F R++
Sbjct: 129 EDRQVTTEEAQAWCMENGNYPYLETSAKDDTNVTVAFEEAVRQV 172
>RGD|619762 [details] [associations]
symbol:Rab11a "RAB11a, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0000910 "cytokinesis" evidence=IEA;ISO]
[GO:0003924 "GTPase activity" evidence=ISO;ISS;IDA] [GO:0005525
"GTP binding" evidence=IDA;TAS] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005802 "trans-Golgi network" evidence=IEA;ISO] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA;ISO] [GO:0030133
"transport vesicle" evidence=IDA] [GO:0030424 "axon" evidence=ISO]
[GO:0030670 "phagocytic vesicle membrane" evidence=IEA] [GO:0031175
"neuron projection development" evidence=ISO;ISS] [GO:0032154
"cleavage furrow" evidence=ISO;ISS] [GO:0032402 "melanosome
transport" evidence=ISS] [GO:0043234 "protein complex"
evidence=IEA;ISO] [GO:0045335 "phagocytic vesicle"
evidence=ISO;ISS] [GO:0045773 "positive regulation of axon
extension" evidence=ISO] [GO:0048169 "regulation of long-term
neuronal synaptic plasticity" evidence=IMP] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0051223
"regulation of protein transport" evidence=IMP] [GO:0055037
"recycling endosome" evidence=ISO;IDA] [GO:0055038 "recycling
endosome membrane" evidence=IEA] [GO:0072659 "protein localization
to plasma membrane" evidence=ISO;ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:619762 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0005886 GO:GO:0007264 GO:GO:0043234
GO:GO:0016192 GO:GO:0015031 GO:GO:0003924 GO:GO:0055037
GO:GO:0007049 GO:GO:0000910 GO:GO:0005802 GO:GO:0072659
PROSITE:PS51419 GO:GO:0030133 GO:GO:0031175 GO:GO:0048169
GO:GO:0032154 GO:GO:0051223 GO:GO:0055038 eggNOG:COG1100
GO:GO:0032402 HOVERGEN:HBG009351 HOGENOM:HOG000233968 OMA:AMGTRDD
GeneTree:ENSGT00690000101664 CTD:8766 KO:K07904 OrthoDB:EOG4RR6J7
EMBL:M75153 EMBL:BC085727 IPI:IPI00214434 PIR:JN0056
RefSeq:NP_112414.1 UniGene:Rn.1016 ProteinModelPortal:P62494
SMR:P62494 DIP:DIP-46857N IntAct:P62494 STRING:P62494 PRIDE:P62494
Ensembl:ENSRNOT00000015598 GeneID:81830 KEGG:rno:81830
UCSC:RGD:619762 InParanoid:P62494 NextBio:615779
Genevestigator:P62494 GermOnline:ENSRNOG00000011302 Uniprot:P62494
Length = 216
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 56/158 (35%), Positives = 84/158 (53%)
Query: 10 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 69
DY FK+V++GD G GK+ + R EF + + TIGVE + I+ WDT
Sbjct: 9 DY-LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 70 AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVD 128
AGQE++ + YY A++++D+ LTY+NV W ++L + NI I+L GNK D
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 127
Query: 129 VKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 164
+++ R V + F K L + E SA + N E F
Sbjct: 128 LRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAF 165
>TAIR|locus:2024276 [details] [associations]
symbol:RAB11c "RAB GTPase 11C" species:3702 "Arabidopsis
thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005886
"plasma membrane" evidence=ISM;IDA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0000910 "cytokinesis" evidence=IMP]
[GO:0005768 "endosome" evidence=IDA] [GO:0009504 "cell plate"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0016192
"vesicle-mediated transport" evidence=RCA] [GO:0019932
"second-messenger-mediated signaling" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005886 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 GO:GO:0005768 GO:GO:0010008 GO:GO:0000910
PROSITE:PS51419 eggNOG:COG1100 GO:GO:0009504 EMBL:AC000132
KO:K07976 HOGENOM:HOG000233968 EMBL:U74669 EMBL:AY045620
EMBL:AY133657 EMBL:AY085684 IPI:IPI00547311 PIR:A86230
RefSeq:NP_172434.1 UniGene:At.20265 ProteinModelPortal:O04486
SMR:O04486 IntAct:O04486 STRING:O04486 PaxDb:O04486 PRIDE:O04486
EnsemblPlants:AT1G09630.1 GeneID:837490 KEGG:ath:AT1G09630
TAIR:At1g09630 InParanoid:O04486 OMA:AKKPCCS PhylomeDB:O04486
ProtClustDB:CLSN2679279 Genevestigator:O04486 GermOnline:AT1G09630
Uniprot:O04486
Length = 217
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 58/167 (34%), Positives = 88/167 (52%)
Query: 1 MALPSQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
MA + DY FK+V++GD G GK+ + R EF + + TIGVE
Sbjct: 1 MARRPDEEYDY-LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGR 59
Query: 61 KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIP 119
++ WDTAGQE++ + YY A++++DVT T++NV W ++L + NI
Sbjct: 60 TVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIV 119
Query: 120 IVLCGNKVDVKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 164
I+L GNK D+K+ R V + ++ K+ L + E SA N EK F
Sbjct: 120 IMLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAF 166
>TAIR|locus:2171790 [details] [associations]
symbol:RABA4a "RAB GTPase homolog A4A" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0007264 GO:GO:0015031 EMBL:AB013395
PROSITE:PS51419 eggNOG:COG1100 KO:K07976 HOGENOM:HOG000233968
HSSP:P35278 EMBL:AY045947 EMBL:AY079309 EMBL:AY087004
IPI:IPI00520272 RefSeq:NP_201330.1 UniGene:At.9298
ProteinModelPortal:Q9FJN8 SMR:Q9FJN8 STRING:Q9FJN8 PaxDb:Q9FJN8
PRIDE:Q9FJN8 EnsemblPlants:AT5G65270.1 GeneID:836652
KEGG:ath:AT5G65270 TAIR:At5g65270 InParanoid:Q9FJN8 OMA:HGAKGAM
PhylomeDB:Q9FJN8 ProtClustDB:CLSN2685897 Genevestigator:Q9FJN8
Uniprot:Q9FJN8
Length = 226
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 56/164 (34%), Positives = 87/164 (53%)
Query: 4 PSQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIR 63
PSQ+ +DY FK+V++GD GK+ + R+ EF + TIGVE + ++
Sbjct: 10 PSQK-IDYV-FKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVK 67
Query: 64 FYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVL 122
WDTAGQE++ + YY A++++D+T R T+ ++P W +L +NI I+L
Sbjct: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVIIL 127
Query: 123 CGNKVD-VKNRQVKAKQVT-FHRKKNLQYYEISAKSNYNFEKPF 164
GNK D V R + + F K+ L + E SA + N E F
Sbjct: 128 IGNKSDLVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAF 171
>ASPGD|ASPL0000062908 [details] [associations]
symbol:avaA species:162425 "Emericella nidulans"
[GO:0042144 "vacuole fusion, non-autophagic" evidence=IMP]
[GO:0006913 "nucleocytoplasmic transport" evidence=IEA] [GO:0006184
"GTP catabolic process" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005774 "vacuolar membrane"
evidence=IDA] [GO:0007032 "endosome organization" evidence=IMP]
[GO:0000329 "fungal-type vacuole membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0030906 "retromer complex, inner shell"
evidence=IEA] [GO:0005741 "mitochondrial outer membrane"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0072665 "protein localization to vacuole" evidence=IEA]
[GO:0061191 "positive regulation of vacuole fusion, non-autophagic"
evidence=IEA] [GO:0030100 "regulation of endocytosis" evidence=IEA]
[GO:0042147 "retrograde transport, endosome to Golgi" evidence=IEA]
[GO:0007035 "vacuolar acidification" evidence=IEA] [GO:0045324
"late endosome to vacuole transport" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0031321
"ascospore-type prospore assembly" evidence=IEA] [GO:0000011
"vacuole inheritance" evidence=IEA] [GO:0006897 "endocytosis"
evidence=IEA] [GO:0051469 "vesicle fusion with vacuole"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:BN001308
GO:GO:0015031 HOGENOM:HOG000233968 OMA:SPRDPEH
ProteinModelPortal:C8VQY7 SMR:C8VQY7 EnsemblFungi:CADANIAT00002661
Uniprot:C8VQY7
Length = 205
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 51/164 (31%), Positives = 91/164 (55%)
Query: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEK 74
K++I+GD G GKT+ + +++ +F Y+ TIG + + + + WDTAGQE+
Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKFSGSYKATIGADFLTKEVLVDDRLVTMQIWDTAGQER 69
Query: 75 FGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDV 129
F L +Y C ++++DV +++ + +W + R E+ P V+ GNK+D+
Sbjct: 70 FQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPESFPFVVIGNKIDM 129
Query: 130 KN--RQVKAKQ-VTFHRKK-NLQYYEISAKSNYNFEKPFLYLAR 169
+ R + +K+ +TF + K N+ Y+E SAK N E+ F +AR
Sbjct: 130 EESKRMISSKRAMTFCQSKGNIPYFETSAKEAVNVEQAFEVIAR 173
>UNIPROTKB|F1NST3 [details] [associations]
symbol:RAB5C "Ras-related protein Rab-5C" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005811
"lipid particle" evidence=IEA] [GO:0007032 "endosome organization"
evidence=IEA] [GO:0030100 "regulation of endocytosis" evidence=IEA]
[GO:0030139 "endocytic vesicle" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GO:GO:0005768 GO:GO:0030100 GO:GO:0030139
GO:GO:0007032 GeneTree:ENSGT00640000091139 OMA:VDLQESN
IPI:IPI00600808 EMBL:AADN02068703 EMBL:AADN02068704
Ensembl:ENSGALT00000005312 Ensembl:ENSGALT00000039914
Uniprot:F1NST3
Length = 216
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 56/161 (34%), Positives = 86/161 (53%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV++G+ GKT+ V R + G+F + E TIG + ++F WDTAGQE
Sbjct: 22 FKLVLLGESAVGKTSLVLRFVKGQFPEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKNR 132
++ L YY Q AI+++D+T T+ W ++L R NI I L GNK D+ +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKELQRQASPNIVIALAGNKADLATK 141
Query: 133 QVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
+ Q T+ +L + E SAK+ N + F+ +A+KL
Sbjct: 142 RAVDFQDAQTYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>UNIPROTKB|F1PTE3 [details] [associations]
symbol:RAB13 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005923 "tight junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 GO:GO:0005923 GeneTree:ENSGT00700000104031
OMA:AMGIVLI EMBL:AAEX03005351 Ensembl:ENSCAFT00000027549
Uniprot:F1PTE3
Length = 203
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 51/161 (31%), Positives = 87/161 (54%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKL+++GD G GKT + R F Y TIG++ KI+ WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDSFNNTYISTIGIDFKIRTVDVEGKKIKLQVWDTAGQE 68
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVK-N 131
+F + YY I+++D+T +++N+ W + + + +L GNK D++
Sbjct: 69 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAK 128
Query: 132 RQVKAKQ-VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
R+V+ +Q + R+ ++++E SAKS+ N ++ F LAR +
Sbjct: 129 RKVQKEQAIKLAREHGIRFFETSAKSSTNVDEAFSSLARDI 169
>UNIPROTKB|Q86YS6 [details] [associations]
symbol:RAB43 "Ras-related protein Rab-43" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0030670
"phagocytic vesicle membrane" evidence=IEA] [GO:0007030 "Golgi
organization" evidence=IMP] [GO:0035526 "retrograde transport,
plasma membrane to Golgi" evidence=IMP] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0003924 "GTPase activity"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0090382 "phagosome maturation" evidence=IMP] [GO:0006184 "GTP
catabolic process" evidence=IDA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 EMBL:CH471052 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 GermOnline:ENSG00000172780
HOGENOM:HOG000233968 OrthoDB:EOG4WQ13N CleanEx:HS_RAB41
EMBL:AY166852 EMBL:AK291014 EMBL:BC062319 IPI:IPI00329441
RefSeq:NP_001191812.1 RefSeq:NP_001191813.1 RefSeq:NP_001191814.1
RefSeq:NP_001191815.1 RefSeq:NP_940892.1 UniGene:Hs.381132
UniGene:Hs.546542 PDB:2HUP PDBsum:2HUP ProteinModelPortal:Q86YS6
SMR:Q86YS6 STRING:Q86YS6 PhosphoSite:Q86YS6 DMDM:74727944
PaxDb:Q86YS6 PRIDE:Q86YS6 Ensembl:ENST00000315150
Ensembl:ENST00000393304 Ensembl:ENST00000393305
Ensembl:ENST00000393307 Ensembl:ENST00000393308 GeneID:339122
KEGG:hsa:339122 UCSC:uc003eln.2 CTD:339122 GeneCards:GC03M128806
HGNC:HGNC:19983 HPA:HPA046840 neXtProt:NX_Q86YS6
PharmGKB:PA134968262 InParanoid:Q86YS6 KO:K07930 OMA:LIGDCGT
EvolutionaryTrace:Q86YS6 GenomeRNAi:339122 NextBio:97235
ArrayExpress:Q86YS6 Bgee:Q86YS6 CleanEx:HS_RAB43
Genevestigator:Q86YS6 Uniprot:Q86YS6
Length = 212
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 63/173 (36%), Positives = 93/173 (53%)
Query: 4 PSQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIR 63
P +Q D+ FKLV+VGD GKT V+R TG F ++ TIGV+ +++
Sbjct: 11 PDEQ-YDF-LFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVK 68
Query: 64 FYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVL 122
WDTAGQE+F + YY AI+ +D+T R ++ +VP W D+ + NI +L
Sbjct: 69 LQIWDTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLL 128
Query: 123 CGNKVDVKN-RQV---KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
GNK D+ R+V +A+ + H L E SAK + N E+ FL +A +L
Sbjct: 129 IGNKSDLSELREVSLAEAQSLAEHYDI-LCAIETSAKDSSNVEEAFLRVATEL 180
>POMBASE|SPAC18G6.03 [details] [associations]
symbol:ypt3 "GTPase Ypt3" species:4896
"Schizosaccharomyces pombe" [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISM] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=TAS]
[GO:0006887 "exocytosis" evidence=IMP] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IC] [GO:0010008 "endosome
membrane" evidence=IEA] [GO:0033205 "cell cycle cytokinesis"
evidence=IMP] [GO:0042144 "vacuole fusion, non-autophagic"
evidence=IMP] [GO:0071852 "fungal-type cell wall organization or
biogenesis" evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
PomBase:SPAC18G6.03 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0005886 GO:GO:0005634 GO:GO:0006886 GO:GO:0007264
GO:GO:0000139 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003924
GO:GO:0010008 GO:GO:0006887 PROSITE:PS51419 GO:GO:0033205
eggNOG:COG1100 GO:GO:0042144 GO:GO:0071852 KO:K07976
HOGENOM:HOG000233968 OMA:QKQIRDS OrthoDB:EOG41K2ND EMBL:X52100
EMBL:X52732 PIR:S10026 RefSeq:NP_593667.1 ProteinModelPortal:P17610
SMR:P17610 STRING:P17610 PRIDE:P17610 EnsemblFungi:SPAC18G6.03.1
GeneID:2542219 KEGG:spo:SPAC18G6.03 NextBio:20803288 Uniprot:P17610
Length = 214
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 56/158 (35%), Positives = 86/158 (54%)
Query: 10 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 69
DY FK V++GD G GK+ + R EF + + TIGVE + + KI+ WDT
Sbjct: 8 DY-LFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDT 66
Query: 70 AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVD 128
AGQE++ + YY A+I++D+T + ++ NV W ++L + NI I+L GNK D
Sbjct: 67 AGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTD 126
Query: 129 VKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 164
+ + R V ++ F + NL + E SA N E+ F
Sbjct: 127 LLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAF 164
>TAIR|locus:2168469 [details] [associations]
symbol:RABA2D "RAB GTPase homolog A2D" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0009504
"cell plate" evidence=IDA] [GO:0016192 "vesicle-mediated transport"
evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0007264 GO:GO:0015031
GO:GO:0005768 GO:GO:0010008 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0009504 EMBL:AB016890 KO:K07976 HOGENOM:HOG000233968
HSSP:P07560 ProtClustDB:PLN03110 EMBL:AF370127 EMBL:AY040051
IPI:IPI00533551 RefSeq:NP_200723.1 UniGene:At.24606
ProteinModelPortal:Q9FIF9 SMR:Q9FIF9 PaxDb:Q9FIF9 PRIDE:Q9FIF9
EnsemblPlants:AT5G59150.1 GeneID:836033 KEGG:ath:AT5G59150
TAIR:At5g59150 InParanoid:Q9FIF9 OMA:VEQDYDY PhylomeDB:Q9FIF9
Genevestigator:Q9FIF9 Uniprot:Q9FIF9
Length = 217
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 58/167 (34%), Positives = 87/167 (52%)
Query: 1 MALPSQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
MA +Q DY FK+V++GD G GKT + R EF + + TIGVE
Sbjct: 1 MAHRVEQDYDY-LFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGK 59
Query: 61 KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIP 119
++ WDTAGQE++ + YY A++++D+T R T+ NV W R+L + NI
Sbjct: 60 TVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIV 119
Query: 120 IVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPF 164
I++ GNK D+ + + A++ T + L + E SA N EK F
Sbjct: 120 IMMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAF 166
>ZFIN|ZDB-GENE-041114-53 [details] [associations]
symbol:rab11a "RAB11a, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0001525
"angiogenesis" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0070121 "Kupffer's vesicle development"
evidence=IMP] [GO:0032402 "melanosome transport" evidence=IMP]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-041114-53
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0001525 GO:GO:0070121 eggNOG:COG1100 GO:GO:0032402
HOVERGEN:HBG009351 HOGENOM:HOG000233968 OMA:AMGTRDD
GeneTree:ENSGT00690000101664 CTD:8766 KO:K07904 OrthoDB:EOG4RR6J7
EMBL:BX908395 EMBL:BC085585 EMBL:BX914216 IPI:IPI00510031
RefSeq:NP_001007360.1 UniGene:Dr.119095 SMR:Q5U3E1 STRING:Q5U3E1
Ensembl:ENSDART00000060766 GeneID:492487 KEGG:dre:492487
InParanoid:Q5U3E1 NextBio:20865048 Uniprot:Q5U3E1
Length = 215
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 55/158 (34%), Positives = 84/158 (53%)
Query: 10 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 69
DY FK+V++GD G GK+ + R EF + + TIGVE + ++ WDT
Sbjct: 9 DY-LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQIWDT 67
Query: 70 AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVD 128
AGQE++ + YY A++++D+ LTY+NV W ++L + NI I+L GNK D
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 127
Query: 129 VKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 164
+++ R V + F K L + E SA + N E F
Sbjct: 128 LRHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAF 165
>ZFIN|ZDB-GENE-050208-660 [details] [associations]
symbol:rab3b "RAB3B, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-050208-660 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00690000101942 EMBL:CR381682 IPI:IPI00482747
Ensembl:ENSDART00000062820 Uniprot:F1QCC8
Length = 218
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 52/163 (31%), Positives = 82/163 (50%)
Query: 5 SQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRF 64
S Q DY FKL+I+G+ GKT+F+ R+ F + T+G++ + N +++
Sbjct: 15 SDQNFDY-MFKLLIIGNSSVGKTSFLFRYADDSFSSSFVSTVGIDFKVKTVYRNDKRVKL 73
Query: 65 YCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLC 123
WDTAGQE++ + YY I+M+D+T +Y V W + +N ++L
Sbjct: 74 QIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESYNAVQDWATQIKTYSWDNAQVILV 133
Query: 124 GNKVDVKNRQVKAKQVTFHRKKNL--QYYEISAKSNYNFEKPF 164
GNK D+ +V + H L +YYE SAK N N + F
Sbjct: 134 GNKCDMDEERVVPFEKGKHLADQLGFEYYEASAKENINVRQVF 176
>DICTYBASE|DDB_G0281337 [details] [associations]
symbol:rab14 "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0005515 "protein binding"
evidence=IPI] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0005764 "lysosome" evidence=IDA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005773 "vacuole"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000331 "contractile
vacuole" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 dictyBase:DDB_G0281337
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0045335
GO:GO:0016020 GenomeReviews:CM000152_GR GO:GO:0015031 GO:GO:0005768
EMBL:AAFI02000040 GO:GO:0005764 GO:GO:0000331 PROSITE:PS51419
eggNOG:COG1100 KO:K07881 OMA:GVQHKPA EMBL:U02927 RefSeq:XP_640740.1
ProteinModelPortal:P36410 SMR:P36410 MINT:MINT-6947926 PRIDE:P36410
EnsemblProtists:DDB0214821 GeneID:8623016 KEGG:ddi:DDB_G0281337
Uniprot:P36410
Length = 206
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 57/159 (35%), Positives = 86/159 (54%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FK +I+GD G GK+ + + +F TIGVE N KI+ WDTAGQE
Sbjct: 9 FKYIIIGDMGVGKSCLLHQFTENKFVPDSPHTIGVEFGTRIVDVNNKKIKLQIWDTAGQE 68
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKN- 131
+F + YY A++++D+T R+TY ++ TW D + N I+L GNK D++
Sbjct: 69 RFRAVTRSYYRGAAGALLVYDITRRITYNHLTTWLTDARNLTNPNTVIMLIGNKKDLEGQ 128
Query: 132 RQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLAR 169
R V ++ + K+N L + E SAK+ N E+ FL A+
Sbjct: 129 RDVTYEEASAFAKQNGLIFVESSAKTGENVEEAFLRTAK 167
>GENEDB_PFALCIPARUM|PF11_0461 [details] [associations]
symbol:Rab6 "PfRab6, GTPase" species:5833
"Plasmodium falciparum" [GO:0005794 "Golgi apparatus" evidence=TAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264 GO:GO:0015031
EMBL:AE014186 KO:K07976 HOGENOM:HOG000233968 OMA:TTKWIED
GenomeReviews:AE014186_GR RefSeq:XP_001348128.2
ProteinModelPortal:Q8IHR8 PRIDE:Q8IHR8
EnsemblProtists:PF11_0461:mRNA GeneID:811004 KEGG:pfa:PF11_0461
EuPathDB:PlasmoDB:PF3D7_1144900 ProtClustDB:PTZ00099 Uniprot:Q8IHR8
Length = 207
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 51/161 (31%), Positives = 91/161 (56%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
+KLV +G+ GKT+ + R + F+ Y+ TIG++ + + G +R WDTAGQE
Sbjct: 12 YKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQE 71
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVDVKN- 131
+F L Y AI+++D+T R +++N W +D+ +++ I L GNK D+ +
Sbjct: 72 RFRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERGKDVIIALVGNKTDLGDL 131
Query: 132 RQVKAKQ-VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
R+V ++ + ++ N ++E SAK+ +N + F +A KL
Sbjct: 132 RKVTYEEGMQKAQEYNTMFHETSAKAGHNIKVLFKKIASKL 172
>UNIPROTKB|Q8IHR8 [details] [associations]
symbol:Rab6 "PfRab6, GTPase" species:36329 "Plasmodium
falciparum 3D7" [GO:0005794 "Golgi apparatus" evidence=TAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264 GO:GO:0015031
EMBL:AE014186 KO:K07976 HOGENOM:HOG000233968 OMA:TTKWIED
GenomeReviews:AE014186_GR RefSeq:XP_001348128.2
ProteinModelPortal:Q8IHR8 PRIDE:Q8IHR8
EnsemblProtists:PF11_0461:mRNA GeneID:811004 KEGG:pfa:PF11_0461
EuPathDB:PlasmoDB:PF3D7_1144900 ProtClustDB:PTZ00099 Uniprot:Q8IHR8
Length = 207
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 51/161 (31%), Positives = 91/161 (56%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
+KLV +G+ GKT+ + R + F+ Y+ TIG++ + + G +R WDTAGQE
Sbjct: 12 YKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQE 71
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVDVKN- 131
+F L Y AI+++D+T R +++N W +D+ +++ I L GNK D+ +
Sbjct: 72 RFRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERGKDVIIALVGNKTDLGDL 131
Query: 132 RQVKAKQ-VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
R+V ++ + ++ N ++E SAK+ +N + F +A KL
Sbjct: 132 RKVTYEEGMQKAQEYNTMFHETSAKAGHNIKVLFKKIASKL 172
>TAIR|locus:2052479 [details] [associations]
symbol:RAB7A "RAB GTPase homolog 7A" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0015031 GO:GO:0003924
PROSITE:PS51419 eggNOG:COG1100 EMBL:AC007019 PANTHER:PTHR24070
KO:K07976 HOGENOM:HOG000233968 HSSP:P32939 EMBL:AB071852
EMBL:BT024593 EMBL:AK229492 EMBL:AY084960 IPI:IPI00535065
IPI:IPI00891361 PIR:C84606 RefSeq:NP_001118357.1 RefSeq:NP_565521.1
UniGene:At.14268 ProteinModelPortal:Q9SJ11 SMR:Q9SJ11 PaxDb:Q9SJ11
PRIDE:Q9SJ11 ProMEX:Q9SJ11 EnsemblPlants:AT2G21880.1 GeneID:816724
KEGG:ath:AT2G21880 TAIR:At2g21880 InParanoid:Q948K7 OMA:TKELHID
PhylomeDB:Q9SJ11 ProtClustDB:CLSN2688325 Genevestigator:Q9SJ11
Uniprot:Q9SJ11
Length = 212
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 51/164 (31%), Positives = 87/164 (53%)
Query: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEK 74
K++++GD G GKT+ + +++ +F K+Y+ TIG + + + + WDTAGQE+
Sbjct: 11 KVIVLGDSGVGKTSLMNQYVYKKFNKQYKATIGADFVTKELHIDEKSVTLQIWDTAGQER 70
Query: 75 FGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVDV 129
F L +Y C ++++DV +++ + WH + + E P VL GNK DV
Sbjct: 71 FQSLGAAFYRGADCCVLVYDVNNLKSFETLNNWHTEFLKQANPMEPETFPFVLIGNKTDV 130
Query: 130 ---KNRQVKAKQVT--FHRKKNLQYYEISAKSNYNFEKPFLYLA 168
+R V K+ K N+ Y+E SAK + N ++ FL +A
Sbjct: 131 DGGNSRVVSNKRAIEWCGSKGNIPYHETSAKEDTNIDEAFLSVA 174
>TAIR|locus:2042321 [details] [associations]
symbol:RAB6A species:3702 "Arabidopsis thaliana"
[GO:0005525 "GTP binding" evidence=IEA;ISS;IDA] [GO:0005794 "Golgi
apparatus" evidence=ISM;IDA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005774 "vacuolar membrane" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000139 "Golgi membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006891 "intra-Golgi vesicle-mediated transport"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0005768 "endosome" evidence=IDA] [GO:0005802 "trans-Golgi
network" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0032940 "secretion by cell" evidence=IGI] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0005886 GO:GO:0009506 GO:GO:0005774 GO:GO:0007264
GO:GO:0000139 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0032940
GO:GO:0016192 GO:GO:0015031 GO:GO:0005768 EMBL:AC003672
GO:GO:0005802 PROSITE:PS51419 eggNOG:COG1100 HOGENOM:HOG000233968
KO:K07893 OMA:TTKWIED HSSP:P20340 EMBL:BT025780 EMBL:AK226988
EMBL:AY087904 IPI:IPI00530291 PIR:T01588 RefSeq:NP_181989.1
UniGene:At.24965 ProteinModelPortal:O80501 SMR:O80501 STRING:O80501
PaxDb:O80501 PRIDE:O80501 EnsemblPlants:AT2G44610.1 GeneID:819069
KEGG:ath:AT2G44610 TAIR:At2g44610 InParanoid:O80501
PhylomeDB:O80501 ProtClustDB:CLSN2683217 Genevestigator:O80501
Uniprot:O80501
Length = 208
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 53/163 (32%), Positives = 86/163 (52%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
+KLV +GD GKT+ + R + +F+ Y+ TIG++ + +R WDTAGQE
Sbjct: 10 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVD-VKN 131
+F L Y A+I++DV +R ++ N W ++ ++ +VL GNK D V
Sbjct: 70 RFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWIDEVRTERGSDVIVVLVGNKTDLVDK 129
Query: 132 RQVKAKQVTFH-RKKNLQYYEISAKSNYNFEKPFLYLARKLAG 173
RQV ++ R+ N+ + E SAK+ +N + F +A L G
Sbjct: 130 RQVSIEEAEAKARELNVMFIETSAKAGFNIKALFRKIAAALPG 172
>WB|WBGene00004274 [details] [associations]
symbol:rab-11.1 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA;TAS] [GO:0005525 "GTP
binding" evidence=IEA;TAS] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0006184 "GTP catabolic
process" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0006952 "defense response" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0055037
"recycling endosome" evidence=IDA] [GO:0060471 "cortical granule
exocytosis" evidence=IMP] [GO:0060473 "cortical granule"
evidence=IDA] [GO:0030703 "eggshell formation" evidence=IMP]
[GO:0032467 "positive regulation of cytokinesis" evidence=IMP]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0006915 GO:GO:0007264 GO:GO:0032467 GO:GO:0006952
GO:GO:0002119 GO:GO:0015031 GO:GO:0003924 GO:GO:0055037
GO:GO:0000910 eggNOG:COG1100 GO:GO:0060473 GO:GO:0030703
HOGENOM:HOG000233968 OMA:AMGTRDD HSSP:P07560
GeneTree:ENSGT00690000101664 GO:GO:0060471 KO:K07904 EMBL:FO081455
PIR:T29035 RefSeq:NP_490675.1 ProteinModelPortal:O01803 SMR:O01803
DIP:DIP-24288N MINT:MINT-1111275 STRING:O01803 PaxDb:O01803
EnsemblMetazoa:F53G12.1.1 EnsemblMetazoa:F53G12.1.2 GeneID:171601
KEGG:cel:CELE_F53G12.1 UCSC:F53G12.1 CTD:171601 WormBase:F53G12.1
InParanoid:O01803 NextBio:871961 ArrayExpress:O01803 Uniprot:O01803
Length = 211
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 53/158 (33%), Positives = 85/158 (53%)
Query: 10 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 69
DY FK+V++GD G GK+ + R EF + + TIGVE ++ WDT
Sbjct: 9 DY-LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQIWDT 67
Query: 70 AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-RVCENIPIVLCGNKVD 128
AGQE++ + YY A++++D+ +TY+NV W ++L +NI I+L GNK D
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGNKSD 127
Query: 129 VKN-RQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPF 164
+++ R V + + ++N L + E SA + N E F
Sbjct: 128 LRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAF 165
>WB|WBGene00008671 [details] [associations]
symbol:F11A5.3 species:6239 "Caenorhabditis elegans"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0019915 "lipid storage" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GO:GO:0019915 eggNOG:COG1100 KO:K07976
HOGENOM:HOG000233968 HSSP:P07560 GeneTree:ENSGT00690000101805
EMBL:Z92830 PIR:T20749 RefSeq:NP_507083.1 UniGene:Cel.4154
ProteinModelPortal:O17788 SMR:O17788 EnsemblMetazoa:F11A5.3
GeneID:184330 KEGG:cel:CELE_F11A5.3 UCSC:F11A5.3 CTD:184330
WormBase:F11A5.3 InParanoid:O17788 NextBio:924368 Uniprot:O17788
Length = 201
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 58/166 (34%), Positives = 90/166 (54%)
Query: 11 YPS--FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWD 68
YP FK VI+GDGG GK+ + R F+ + T+GVE D + K+R WD
Sbjct: 2 YPDHMFKYVIIGDGGVGKSNLLLRFTDELFDPIHTTTLGVEFGYKDLQIDKYKVRLRVWD 61
Query: 69 TAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKV 127
T GQE F + YY + A++++D+T R ++ ++ W DL + + I+L GNK
Sbjct: 62 TCGQENFRSIIRAYYRNALGALLVYDITCRKSFVHLEQWLSDLRQHGHPEMVIMLIGNKS 121
Query: 128 DVKN-RQVKAKQ-VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
D+K R V ++ F +K L + E SAK+N + EK F+ A ++
Sbjct: 122 DLKAVRDVTTEEGEAFAKKNGLTFMETSAKANKHVEKAFVNTAHEI 167
>UNIPROTKB|O01803 [details] [associations]
symbol:rab-11.1 "Protein RAB-11.1" species:6239
"Caenorhabditis elegans" [GO:0006184 "GTP catabolic process"
evidence=TAS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0009792 GO:GO:0006898
GO:GO:0040007 GO:GO:0006915 GO:GO:0007264 GO:GO:0032467
GO:GO:0006952 GO:GO:0002119 GO:GO:0015031 GO:GO:0003924
GO:GO:0055037 GO:GO:0000910 eggNOG:COG1100 GO:GO:0060473
GO:GO:0030703 HOGENOM:HOG000233968 OMA:AMGTRDD HSSP:P07560
GeneTree:ENSGT00690000101664 GO:GO:0060471 KO:K07904 EMBL:FO081455
PIR:T29035 RefSeq:NP_490675.1 ProteinModelPortal:O01803 SMR:O01803
DIP:DIP-24288N MINT:MINT-1111275 STRING:O01803 PaxDb:O01803
EnsemblMetazoa:F53G12.1.1 EnsemblMetazoa:F53G12.1.2 GeneID:171601
KEGG:cel:CELE_F53G12.1 UCSC:F53G12.1 CTD:171601 WormBase:F53G12.1
InParanoid:O01803 NextBio:871961 ArrayExpress:O01803 Uniprot:O01803
Length = 211
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 53/158 (33%), Positives = 85/158 (53%)
Query: 10 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 69
DY FK+V++GD G GK+ + R EF + + TIGVE ++ WDT
Sbjct: 9 DY-LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQIWDT 67
Query: 70 AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-RVCENIPIVLCGNKVD 128
AGQE++ + YY A++++D+ +TY+NV W ++L +NI I+L GNK D
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGNKSD 127
Query: 129 VKN-RQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPF 164
+++ R V + + ++N L + E SA + N E F
Sbjct: 128 LRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAF 165
>ZFIN|ZDB-GENE-070822-21 [details] [associations]
symbol:zgc:171927 "zgc:171927" species:7955 "Danio
rerio" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-070822-21 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 GeneTree:ENSGT00700000104049
EMBL:AL928851 IPI:IPI00858827 Ensembl:ENSDART00000004518
OMA:SKINSAP Bgee:F1RBB0 Uniprot:F1RBB0
Length = 210
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 55/165 (33%), Positives = 86/165 (52%)
Query: 10 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 69
DY FKL+++GD G GK+ + R + + Y TIGV+ ++ WDT
Sbjct: 6 DY-LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEMEGKTVKLQIWDT 64
Query: 70 AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVD 128
AGQE+F + YY II++DVT + ++ NV W ++ R CEN+ +L GNK D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTEQESFNNVKQWLEEIDRYACENVSKLLVGNKSD 124
Query: 129 VKNRQVK--AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
+ +++V + F + E SAK+ N EK FL +A ++
Sbjct: 125 LSSKKVVDFTTAMEFTESLKIPLLETSAKNANNVEKAFLTMASEI 169
>UNIPROTKB|Q98932 [details] [associations]
symbol:RAB5C "Ras-related protein Rab-5C" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0031901 "early endosome membrane"
evidence=IEA] [GO:0019003 "GDP binding" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0031901
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
HOVERGEN:HBG009351 HOGENOM:HOG000233968 HSSP:P20339
OrthoDB:EOG4Z0B6M CTD:5878 KO:K07889 EMBL:Y07811 IPI:IPI00600808
RefSeq:NP_989856.1 UniGene:Gga.2500 ProteinModelPortal:Q98932
SMR:Q98932 STRING:Q98932 PRIDE:Q98932 GeneID:395197 KEGG:gga:395197
InParanoid:Q98932 NextBio:20815287 Uniprot:Q98932
Length = 216
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 55/161 (34%), Positives = 86/161 (53%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV++G+ GK++ V R + G+F + E TIG + ++F WDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKNR 132
++ L YY Q AI+++D+T T+ W ++L R NI I L GNK D+ +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKELQRQASPNIVIALAGNKADLATK 141
Query: 133 QVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
+ Q T+ +L + E SAK+ N + F+ +A+KL
Sbjct: 142 RAVDFQDAQTYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>UNIPROTKB|P10949 [details] [associations]
symbol:RAB3C "Ras-related protein Rab-3C" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0017157
"regulation of exocytosis" evidence=IEA] [GO:0008021 "synaptic
vesicle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
GO:GO:0008021 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
GO:GO:0017157 HOGENOM:HOG000233968 GeneTree:ENSGT00690000101942
OrthoDB:EOG4TB4C6 EMBL:M19887 EMBL:BC112795 IPI:IPI00713835
PIR:C29224 RefSeq:NP_001040071.1 RefSeq:NP_789862.1
UniGene:Bt.91125 ProteinModelPortal:P10949 SMR:P10949 PRIDE:P10949
Ensembl:ENSBTAT00000009611 GeneID:338100 GeneID:617600
KEGG:bta:338100 KEGG:bta:617600 CTD:115827 InParanoid:P10949
KO:K07883 OMA:QMASSQD NextBio:20812538 ArrayExpress:P10949
Uniprot:P10949
Length = 227
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 51/163 (31%), Positives = 87/163 (53%)
Query: 5 SQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRF 64
S Q DY FKL+I+G+ GKT+F+ R+ F + T+G++ F N +I+
Sbjct: 23 SDQNFDY-MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKL 81
Query: 65 YCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLC 123
WDTAGQE++ + YY I+M+D+T ++ V W + +N ++L
Sbjct: 82 QIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILV 141
Query: 124 GNKVDVKNRQVKAKQVTFHRKKNL--QYYEISAKSNYNFEKPF 164
GNK D+++ +V + + H + L +++E SAK N N ++ F
Sbjct: 142 GNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTF 184
>UNIPROTKB|Q0VCB4 [details] [associations]
symbol:RAB9B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00700000104345 OrthoDB:EOG4R7VBS
CTD:51209 KO:K07900 OMA:CCPYFET EMBL:DAAA02071340 EMBL:BC120255
IPI:IPI00702295 RefSeq:NP_001069009.1 UniGene:Bt.25034 SMR:Q0VCB4
Ensembl:ENSBTAT00000026403 GeneID:511866 KEGG:bta:511866
InParanoid:Q0VCB4 NextBio:20870137 Uniprot:Q0VCB4
Length = 201
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 53/164 (32%), Positives = 87/164 (53%)
Query: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEK 74
K++++GDGG GK++ + R++T +F+ + TIGVE D + + WDTAGQE+
Sbjct: 9 KVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQER 68
Query: 75 FGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVDV 129
F LR +Y C ++ F V R +++N+ W ++ E+ P V+ GNKVD
Sbjct: 69 FKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLGNKVDK 128
Query: 130 KNRQVKAKQVTFHRKKN--LQYYEISAKSNYNFEKPFLYLARKL 171
++RQV ++ +N Y E SAK + N F R++
Sbjct: 129 EDRQVTTEEAQSWCMENGDYPYLETSAKDDTNVTVAFEEAVRQV 172
>UNIPROTKB|Q2TA29 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9913
"Bos taurus" [GO:0006184 "GTP catabolic process" evidence=ISS]
[GO:0045335 "phagocytic vesicle" evidence=ISS] [GO:0055037
"recycling endosome" evidence=ISS] [GO:0032402 "melanosome
transport" evidence=ISS] [GO:0072659 "protein localization to
plasma membrane" evidence=ISS] [GO:0031175 "neuron projection
development" evidence=ISS] [GO:0032154 "cleavage furrow"
evidence=ISS] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0055038 "recycling endosome membrane" evidence=IEA] [GO:0030670
"phagocytic vesicle membrane" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 GO:GO:0055037
GO:GO:0007049 GO:GO:0072659 PROSITE:PS51419 GO:GO:0031175
GO:GO:0032154 GO:GO:0055038 eggNOG:COG1100 GO:GO:0032402
HOVERGEN:HBG009351 HOGENOM:HOG000233968 HSSP:Q15907 EMBL:BC111143
IPI:IPI00695221 RefSeq:NP_001033251.1 UniGene:Bt.44630
ProteinModelPortal:Q2TA29 SMR:Q2TA29 STRING:Q2TA29 PRIDE:Q2TA29
GeneID:534708 KEGG:bta:534708 CTD:8766 InParanoid:Q2TA29 KO:K07904
OrthoDB:EOG4RR6J7 NextBio:20876511 Uniprot:Q2TA29
Length = 216
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 56/158 (35%), Positives = 83/158 (52%)
Query: 10 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 69
DY FK+V++GD G GK+ + R EF + + TIGVE + I+ WDT
Sbjct: 9 DY-LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 70 AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVD 128
AGQE++ + YY A++++D+ LTY+NV W ++L + NI I+L GNK D
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 127
Query: 129 VKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 164
+++ R V + F K L + E SA N E F
Sbjct: 128 LRHLRAVPTDEARAFAEKNGLSFIETSALDYTNVEAAF 165
>UNIPROTKB|Q58DS5 [details] [associations]
symbol:RAB13 "Ras-related protein Rab-13" species:9913 "Bos
taurus" [GO:0005525 "GTP binding" evidence=ISS] [GO:0030659
"cytoplasmic vesicle membrane" evidence=IEA] [GO:0005923 "tight
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
GO:GO:0007264 GO:GO:0015031 GO:GO:0005923 GO:GO:0030659
PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 EMBL:BT021522 EMBL:BC109840 IPI:IPI00687642
RefSeq:NP_001019711.1 UniGene:Bt.4127 ProteinModelPortal:Q58DS5
SMR:Q58DS5 STRING:Q58DS5 PRIDE:Q58DS5 Ensembl:ENSBTAT00000023407
GeneID:514541 KEGG:bta:514541 CTD:5872 GeneTree:ENSGT00700000104031
InParanoid:Q58DS5 KO:K06109 OrthoDB:EOG4BVRVS NextBio:20871388
Uniprot:Q58DS5
Length = 203
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 51/161 (31%), Positives = 86/161 (53%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKL+++GD G GKT + R F Y TIG++ KI+ WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFRIRTVDIEGKKIKLQVWDTAGQE 68
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVK-N 131
+F + YY I+++D+T +++N+ W + + + +L GNK D++
Sbjct: 69 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAK 128
Query: 132 RQVKAKQVT-FHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
R+V+ +Q R+ ++++E SAKS+ N ++ F LAR +
Sbjct: 129 RKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 169
>UNIPROTKB|E2QSW2 [details] [associations]
symbol:RAB3C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00690000101942 EMBL:AAEX03001448
ProteinModelPortal:E2QSW2 Ensembl:ENSCAFT00000006096 Uniprot:E2QSW2
Length = 225
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 51/163 (31%), Positives = 87/163 (53%)
Query: 5 SQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRF 64
S Q DY FKL+I+G+ GKT+F+ R+ F + T+G++ F N +I+
Sbjct: 21 SDQNFDY-MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKL 79
Query: 65 YCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLC 123
WDTAGQE++ + YY I+M+D+T ++ V W + +N ++L
Sbjct: 80 QIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILV 139
Query: 124 GNKVDVKNRQVKAKQVTFHRKKNL--QYYEISAKSNYNFEKPF 164
GNK D+++ +V + + H + L +++E SAK N N ++ F
Sbjct: 140 GNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTF 182
>UNIPROTKB|E2RBU0 [details] [associations]
symbol:RAB9B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104345 CTD:51209 KO:K07900 OMA:CCPYFET
EMBL:AAEX03026730 RefSeq:XP_538124.1 ProteinModelPortal:E2RBU0
PRIDE:E2RBU0 Ensembl:ENSCAFT00000028260 GeneID:481003
KEGG:cfa:481003 NextBio:20855891 Uniprot:E2RBU0
Length = 201
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 53/164 (32%), Positives = 87/164 (53%)
Query: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEK 74
K++++GDGG GK++ + R++T +F+ + TIGVE D + + WDTAGQE+
Sbjct: 9 KVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQER 68
Query: 75 FGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVDV 129
F LR +Y C ++ F V R +++N+ W ++ E+ P V+ GNKVD
Sbjct: 69 FKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLGNKVDK 128
Query: 130 KNRQVKAKQVTFHRKKN--LQYYEISAKSNYNFEKPFLYLARKL 171
++RQV ++ +N Y E SAK + N F R++
Sbjct: 129 EDRQVTTEEAQAWCMENGDYPYLETSAKDDTNVTVAFEEAVRQV 172
>UNIPROTKB|E2RC93 [details] [associations]
symbol:RAB3C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0017157 "regulation of exocytosis"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0008021 GO:GO:0017157 GeneTree:ENSGT00690000101942
OMA:QMASSQD EMBL:AAEX03001448 EMBL:AAEX03001449 EMBL:AAEX03001450
ProteinModelPortal:E2RC93 Ensembl:ENSCAFT00000011237 Uniprot:E2RC93
Length = 227
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 51/163 (31%), Positives = 87/163 (53%)
Query: 5 SQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRF 64
S Q DY FKL+I+G+ GKT+F+ R+ F + T+G++ F N +I+
Sbjct: 23 SDQNFDY-MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKL 81
Query: 65 YCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLC 123
WDTAGQE++ + YY I+M+D+T ++ V W + +N ++L
Sbjct: 82 QIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILV 141
Query: 124 GNKVDVKNRQVKAKQVTFHRKKNL--QYYEISAKSNYNFEKPF 164
GNK D+++ +V + + H + L +++E SAK N N ++ F
Sbjct: 142 GNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTF 184
>UNIPROTKB|Q96E17 [details] [associations]
symbol:RAB3C "Ras-related protein Rab-3C" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0017157 "regulation of exocytosis" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0005886 GO:GO:0007264 GO:GO:0015031 GO:GO:0008021
PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351 GO:GO:0017157
HOGENOM:HOG000233968 OrthoDB:EOG4TB4C6 HPA:HPA003160 CTD:115827
KO:K07883 OMA:QMASSQD EMBL:AY026936 EMBL:BC013033 IPI:IPI00061114
RefSeq:NP_612462.1 UniGene:Hs.482173 ProteinModelPortal:Q96E17
SMR:Q96E17 IntAct:Q96E17 STRING:Q96E17 PhosphoSite:Q96E17
DMDM:23396832 PaxDb:Q96E17 PRIDE:Q96E17 Ensembl:ENST00000282878
GeneID:115827 KEGG:hsa:115827 UCSC:uc003jrp.3 GeneCards:GC05P057914
HGNC:HGNC:30269 MIM:612829 neXtProt:NX_Q96E17 PharmGKB:PA134874100
InParanoid:Q96E17 PhylomeDB:Q96E17 GenomeRNAi:115827 NextBio:79698
Bgee:Q96E17 CleanEx:HS_RAB3C Genevestigator:Q96E17
GermOnline:ENSG00000152932 Uniprot:Q96E17
Length = 227
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 51/163 (31%), Positives = 87/163 (53%)
Query: 5 SQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRF 64
S Q DY FKL+I+G+ GKT+F+ R+ F + T+G++ F N +I+
Sbjct: 23 SDQNFDY-MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKL 81
Query: 65 YCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLC 123
WDTAGQE++ + YY I+M+D+T ++ V W + +N ++L
Sbjct: 82 QIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILV 141
Query: 124 GNKVDVKNRQVKAKQVTFHRKKNL--QYYEISAKSNYNFEKPF 164
GNK D+++ +V + + H + L +++E SAK N N ++ F
Sbjct: 142 GNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTF 184
>UNIPROTKB|Q9NP90 [details] [associations]
symbol:RAB9B "Ras-related protein Rab-9B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030670 "phagocytic vesicle membrane" evidence=IEA] [GO:0006895
"Golgi to endosome transport" evidence=NAS] [GO:0005525 "GTP
binding" evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005575 "cellular_component" evidence=ND] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0019003 "GDP binding"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 PROSITE:PS51419 GO:GO:0006895 eggNOG:COG1100
GO:GO:0019003 HOVERGEN:HBG009351 HOGENOM:HOG000233968
OrthoDB:EOG4R7VBS EMBL:AB036693 EMBL:AK313425 EMBL:AL139228
EMBL:BC093756 EMBL:BC093758 IPI:IPI00014603 RefSeq:NP_057454.1
UniGene:Hs.522736 PDB:2OCB PDBsum:2OCB ProteinModelPortal:Q9NP90
SMR:Q9NP90 IntAct:Q9NP90 PhosphoSite:Q9NP90 DMDM:13124471
PaxDb:Q9NP90 PRIDE:Q9NP90 Ensembl:ENST00000243298 GeneID:51209
KEGG:hsa:51209 UCSC:uc004ell.2 CTD:51209 GeneCards:GC0XM103077
HGNC:HGNC:14090 MIM:300285 neXtProt:NX_Q9NP90 PharmGKB:PA34153
InParanoid:Q9NP90 KO:K07900 OMA:CCPYFET PhylomeDB:Q9NP90
EvolutionaryTrace:Q9NP90 GenomeRNAi:51209 NextBio:54280 Bgee:Q9NP90
CleanEx:HS_RAB9B Genevestigator:Q9NP90 GermOnline:ENSG00000123570
Uniprot:Q9NP90
Length = 201
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 53/164 (32%), Positives = 87/164 (53%)
Query: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEK 74
K++++GDGG GK++ + R++T +F+ + TIGVE D + + WDTAGQE+
Sbjct: 9 KVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQER 68
Query: 75 FGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVDV 129
F LR +Y C ++ F V R +++N+ W ++ E+ P V+ GNKVD
Sbjct: 69 FKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLGNKVDK 128
Query: 130 KNRQVKAKQVTFHRKKN--LQYYEISAKSNYNFEKPFLYLARKL 171
++RQV ++ +N Y E SAK + N F R++
Sbjct: 129 EDRQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQV 172
>UNIPROTKB|F1RYC4 [details] [associations]
symbol:LOC100525674 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104345 KO:K07900 OMA:CCPYFET
EMBL:FP102484 RefSeq:XP_003135320.1 Ensembl:ENSSSCT00000027623
Ensembl:ENSSSCT00000033325 GeneID:100525674 KEGG:ssc:100525674
Uniprot:F1RYC4
Length = 201
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 53/164 (32%), Positives = 87/164 (53%)
Query: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEK 74
K++++GDGG GK++ + R++T +F+ + TIGVE D + + WDTAGQE+
Sbjct: 9 KVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQER 68
Query: 75 FGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVDV 129
F LR +Y C ++ F V R +++N+ W ++ E+ P V+ GNKVD
Sbjct: 69 FKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLGNKVDK 128
Query: 130 KNRQVKAKQVTFHRKKN--LQYYEISAKSNYNFEKPFLYLARKL 171
++RQV ++ +N Y E SAK + N F R++
Sbjct: 129 EDRQVTTEEAQAWCMENGDYPYLETSAKDDTNVTVAFEEAVRQV 172
>UNIPROTKB|F1SLJ0 [details] [associations]
symbol:RAB3C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0017157 "regulation of exocytosis" evidence=IEA]
[GO:0008021 "synaptic vesicle" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0008021 GO:GO:0017157 GeneTree:ENSGT00690000101942 KO:K07883
OMA:QMASSQD EMBL:CU914321 EMBL:CU914659 EMBL:FP565241
RefSeq:XP_003359827.2 Ensembl:ENSSSCT00000018435 GeneID:100523703
KEGG:ssc:100523703 Uniprot:F1SLJ0
Length = 225
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 51/163 (31%), Positives = 87/163 (53%)
Query: 5 SQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRF 64
S Q DY FKL+I+G+ GKT+F+ R+ F + T+G++ F N +I+
Sbjct: 21 SDQNFDY-MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKL 79
Query: 65 YCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLC 123
WDTAGQE++ + YY I+M+D+T ++ V W + +N ++L
Sbjct: 80 QIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILV 139
Query: 124 GNKVDVKNRQVKAKQVTFHRKKNL--QYYEISAKSNYNFEKPF 164
GNK D+++ +V + + H + L +++E SAK N N ++ F
Sbjct: 140 GNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTF 182
>UNIPROTKB|Q5R4W9 [details] [associations]
symbol:RAB9B "Ras-related protein Rab-9B" species:9601
"Pongo abelii" [GO:0019003 "GDP binding" evidence=ISS] [GO:0045335
"phagocytic vesicle" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419 GO:GO:0019003
HOVERGEN:HBG009351 GeneTree:ENSGT00700000104345 OrthoDB:EOG4R7VBS
CTD:51209 KO:K07900 OMA:CCPYFET EMBL:CR861121 RefSeq:NP_001126880.1
UniGene:Pab.18539 ProteinModelPortal:Q5R4W9 PRIDE:Q5R4W9
Ensembl:ENSPPYT00000024017 GeneID:100173893 KEGG:pon:100173893
InParanoid:Q5R4W9 Uniprot:Q5R4W9
Length = 201
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 53/164 (32%), Positives = 87/164 (53%)
Query: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEK 74
K++++GDGG GK++ + R++T +F+ + TIGVE D + + WDTAGQE+
Sbjct: 9 KVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQER 68
Query: 75 FGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVDV 129
F LR +Y C ++ F V R +++N+ W ++ E+ P V+ GNKVD
Sbjct: 69 FKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLGNKVDK 128
Query: 130 KNRQVKAKQVTFHRKKN--LQYYEISAKSNYNFEKPFLYLARKL 171
++RQV ++ +N Y E SAK + N F R++
Sbjct: 129 EDRQVTTEEAQAWCMENGDYPYLETSAKDDTNVTVAFEEAVRQV 172
>UNIPROTKB|Q95UJ0 [details] [associations]
symbol:Rab7a "Ras-related protein Rab-7a" species:43137
"Paramecium octaurelia" [GO:0003674 "molecular_function"
evidence=ND] [GO:0030670 "phagocytic vesicle membrane"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0090382 "phagosome maturation" evidence=IMP] [GO:0090383
"phagosome acidification" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0030670 GO:GO:0015031 PROSITE:PS51419 GO:GO:0090383
EMBL:AY050242 EMBL:AY744503 EMBL:FJ358492 HSSP:P32939
ProteinModelPortal:Q95UJ0 SMR:Q95UJ0 Uniprot:Q95UJ0
Length = 206
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 48/167 (28%), Positives = 90/167 (53%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FK++I+GD G GKT+ + +++ F ++Y T+G + + + + WDTAGQE
Sbjct: 9 FKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMIDDRMVTLQIWDTAGQE 68
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVD 128
+F L +Y C ++++D+T ++ ++ +W + + E+ P V+ GNK+D
Sbjct: 69 RFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSWRDEFLMQGQPKDPEHFPFVVLGNKLD 128
Query: 129 -VKNRQVKAKQVTFHRKK--NLQYYEISAKSNYNFEKPFLYLARKLA 172
R+V+ + K N+Q++E+SAK N E+ F +A+ A
Sbjct: 129 KATERKVQESKAQQWCKSHGNIQFFEVSAKDATNIEQAFQDIAKAAA 175
>MGI|MGI:1927232 [details] [associations]
symbol:Rab13 "RAB13, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=TAS]
[GO:0005525 "GTP binding" evidence=ISO] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005911 "cell-cell junction" evidence=IDA]
[GO:0005923 "tight junction" evidence=IDA] [GO:0006184 "GTP
catabolic process" evidence=TAS] [GO:0006810 "transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=TAS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016023
"cytoplasmic membrane-bounded vesicle" evidence=TAS] [GO:0019897
"extrinsic to plasma membrane" evidence=TAS] [GO:0030054 "cell
junction" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:1927232 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
Reactome:REACT_147847 GO:GO:0006886 GO:GO:0007264 GO:GO:0003924
GO:GO:0019897 GO:GO:0016023 GO:GO:0005923 GO:GO:0030659
PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 CTD:5872 GeneTree:ENSGT00700000104031
KO:K06109 OrthoDB:EOG4BVRVS OMA:AMGIVLI EMBL:AK002303 EMBL:BC027214
IPI:IPI00121183 RefSeq:NP_080953.1 UniGene:Mm.29355
ProteinModelPortal:Q9DD03 SMR:Q9DD03 MINT:MINT-1340848
STRING:Q9DD03 PhosphoSite:Q9DD03 PaxDb:Q9DD03 PRIDE:Q9DD03
Ensembl:ENSMUST00000065418 GeneID:68328 KEGG:mmu:68328
UCSC:uc008qbn.1 InParanoid:Q9DD03 NextBio:327005 Bgee:Q9DD03
CleanEx:MM_RAB13 Genevestigator:Q9DD03
GermOnline:ENSMUSG00000027935 Uniprot:Q9DD03
Length = 202
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 51/161 (31%), Positives = 86/161 (53%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKL+++GD G GKT + R F Y TIG++ +I+ WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDTAGQE 68
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVK-N 131
+F + YY I+++D+T +++N+ W + + + +L GNK D++
Sbjct: 69 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAK 128
Query: 132 RQVKAKQVT-FHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
RQV+ +Q R+ ++++E SAKS+ N ++ F LAR +
Sbjct: 129 RQVQREQAEKLAREHRIRFFETSAKSSVNVDEAFSSLARDI 169
>MGI|MGI:2442454 [details] [associations]
symbol:Rab9b "RAB9B, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0019003 "GDP
binding" evidence=ISO] [GO:0045335 "phagocytic vesicle"
evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:2442454 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0019003 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104345 OrthoDB:EOG4R7VBS CTD:51209 KO:K07900
EMBL:AK034442 EMBL:AK049693 IPI:IPI00221865 RefSeq:NP_795945.1
UniGene:Mm.44557 ProteinModelPortal:Q8BHH2 SMR:Q8BHH2
PhosphoSite:Q8BHH2 PaxDb:Q8BHH2 PRIDE:Q8BHH2
Ensembl:ENSMUST00000058814 GeneID:319642 KEGG:mmu:319642
InParanoid:Q8BHH2 NextBio:395140 Bgee:Q8BHH2 CleanEx:MM_RAB9B
Genevestigator:Q8BHH2 GermOnline:ENSMUSG00000043463 Uniprot:Q8BHH2
Length = 201
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 53/164 (32%), Positives = 86/164 (52%)
Query: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEK 74
K++++GDGG GK++ + R++T +F+ + TIGVE D + + WDTAGQE+
Sbjct: 9 KVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQER 68
Query: 75 FGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-----NIPIVLCGNKVDV 129
F LR +Y C ++ F V R +++N+ W ++ + + P V+ GNKVD
Sbjct: 69 FKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPDHFPFVVLGNKVDK 128
Query: 130 KNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
++RQV + Q N Y E SAK + N F R++
Sbjct: 129 EDRQVTTEEAQAWCMENGNYPYLETSAKDDTNVTVAFEEAVRQV 172
>TAIR|locus:2194095 [details] [associations]
symbol:RABA6b "RAB GTPase homolog A6B" species:3702
"Arabidopsis thaliana" [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006913
"nucleocytoplasmic transport" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419
eggNOG:COG1100 EMBL:AC034107 EMBL:AC069551 UniGene:At.22394
KO:K07976 HOGENOM:HOG000233968 EMBL:AK228658 IPI:IPI00535023
RefSeq:NP_173258.2 ProteinModelPortal:Q0WQN4 SMR:Q0WQN4
EnsemblPlants:AT1G18200.1 GeneID:838399 KEGG:ath:AT1G18200
TAIR:At1g18200 InParanoid:Q0WQN4 OMA:TRRITFK Genevestigator:Q0WQN4
Uniprot:Q0WQN4
Length = 229
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 55/165 (33%), Positives = 88/165 (53%)
Query: 10 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 69
DY FK V++GD GK+ + R EF +PTIGV+ + I+ WDT
Sbjct: 11 DY-LFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQIWDT 69
Query: 70 AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVD 128
AGQE+F + YY A++++D+T R+T+KN+ W +L +VL GNK D
Sbjct: 70 AGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETVVVLVGNKSD 129
Query: 129 V-KNRQVKAKQ-VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
+ ++R+V+ ++ T + L + E SA N N E+ FL + ++
Sbjct: 130 LGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRI 174
>RGD|1307095 [details] [associations]
symbol:Rab5c "RAB5C, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0015031 "protein transport"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:1307095 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0005811 GO:GO:0015031
GO:GO:0030100 GO:GO:0030139 GO:GO:0007032 OrthoDB:EOG4Z0B6M
OMA:VDLQESN IPI:IPI00564330 Ensembl:ENSRNOT00000040235
UCSC:RGD:1307095 ArrayExpress:D4ABV4 Uniprot:D4ABV4
Length = 232
Score = 206 (77.6 bits), Expect = 4.5e-20, Sum P(2) = 4.5e-20
Identities = 43/121 (35%), Positives = 67/121 (55%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV++G+ GK++ V R + G+F + E TIG + ++F WDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKNR 132
++ L YY Q AI+++D+T T+ W ++L R NI I L GNK D+ ++
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASK 141
Query: 133 Q 133
+
Sbjct: 142 R 142
Score = 46 (21.3 bits), Expect = 4.5e-20, Sum P(2) = 4.5e-20
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 146 NLQYYEISAKSNYNFEKPFLYLARKL 171
+L + E SAK+ N + F+ +A+KL
Sbjct: 173 SLLFMETSAKTAMNVNEIFMAIAKKL 198
>ASPGD|ASPL0000015781 [details] [associations]
symbol:srgH species:162425 "Emericella nidulans"
[GO:0005769 "early endosome" evidence=IDA] [GO:0006897
"endocytosis" evidence=IMP] [GO:0005525 "GTP binding" evidence=IDA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IMP] [GO:0006623 "protein targeting to vacuole"
evidence=IMP] [GO:0044088 "regulation of vacuole organization"
evidence=IMP] [GO:0005770 "late endosome" evidence=IDA] [GO:0006913
"nucleocytoplasmic transport" evidence=IEA] [GO:0006184 "GTP
catabolic process" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IEA] [GO:0031338 "regulation of vesicle fusion"
evidence=IEA] [GO:0070314 "G1 to G0 transition" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
EMBL:BN001302 eggNOG:COG1100 EMBL:AACD01000062 KO:K07976
HOGENOM:HOG000233968 OMA:PTSRTCC OrthoDB:EOG4S1XHJ
RefSeq:XP_661446.1 ProteinModelPortal:Q5B6I8 SMR:Q5B6I8
EnsemblFungi:CADANIAT00004864 GeneID:2873265 KEGG:ani:AN3842.2
Uniprot:Q5B6I8
Length = 218
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 58/172 (33%), Positives = 95/172 (55%)
Query: 11 YPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGV----EVHPLDFFTNCGKIRFYC 66
+ FKLV++G+ GK++ V R + +F+ E TIG + LD T ++F
Sbjct: 15 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTT---VKFEI 71
Query: 67 WDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGN 125
WDTAGQE++ L YY + CA++++D+T + +W ++L R ENI I L GN
Sbjct: 72 WDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGN 131
Query: 126 KVDV--KN---RQVK-AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
K+D+ +N R + A + R+ L ++E SAK++ N + F +A+KL
Sbjct: 132 KLDLVTENPDKRAIPTADAEAYAREAGLLFFETSAKTSSNVRELFTAIAKKL 183
>UNIPROTKB|E1BVF5 [details] [associations]
symbol:RAB9B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104345 CTD:51209 KO:K07900
OMA:CCPYFET EMBL:AADN02013205 IPI:IPI00585123 RefSeq:XP_001232252.1
RefSeq:XP_001232274.1 RefSeq:XP_420182.2 UniGene:Gga.55319
Ensembl:ENSGALT00000007868 GeneID:422187 KEGG:gga:422187
NextBio:20824856 Uniprot:E1BVF5
Length = 201
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 53/164 (32%), Positives = 83/164 (50%)
Query: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEK 74
K++++GDGG GK++ + R++T +F+ + TIGVE D + + WDTAGQE+
Sbjct: 9 KVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQER 68
Query: 75 FGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVDV 129
F LR +Y C ++ F V R +++N+ W ++ E P V+ GNK+D
Sbjct: 69 FKSLRTPFYRGADCCLLTFSVDDRQSFENLSNWQKEFVYYADVKDPERFPFVVLGNKIDK 128
Query: 130 KNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
RQV + Q N Y E SAK + N F R++
Sbjct: 129 LERQVSTEEAQAWCMENGNYPYLETSAKDDTNVAVAFEEAVRQV 172
>UNIPROTKB|P51153 [details] [associations]
symbol:RAB13 "Ras-related protein Rab-13" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005923 "tight junction" evidence=IEA] [GO:0030659 "cytoplasmic
vesicle membrane" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IDA] [GO:0016192 "vesicle-mediated transport"
evidence=TAS] [GO:0003924 "GTPase activity" evidence=TAS]
[GO:0007155 "cell adhesion" evidence=TAS] [GO:0006184 "GTP
catabolic process" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
Reactome:REACT_11123 InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
GO:GO:0005737 GO:GO:0007264 GO:GO:0016192 GO:GO:0015031
GO:GO:0003924 GO:GO:0007155 GO:GO:0005923 GO:GO:0030659
PROSITE:PS51419 EMBL:CH471121 eggNOG:COG1100 HOVERGEN:HBG009351
EMBL:AL358472 CTD:5872 KO:K06109 OrthoDB:EOG4BVRVS EMBL:X75593
EMBL:AY423722 EMBL:AF498948 EMBL:AK291580 EMBL:BT019700
EMBL:BT019701 EMBL:BC000799 EMBL:BC009227 EMBL:BC073168
IPI:IPI00016373 PIR:A49647 RefSeq:NP_002861.1 UniGene:Hs.151536
ProteinModelPortal:P51153 SMR:P51153 IntAct:P51153 STRING:P51153
PhosphoSite:P51153 DMDM:1710016 PaxDb:P51153 PRIDE:P51153
DNASU:5872 Ensembl:ENST00000368575 GeneID:5872 KEGG:hsa:5872
UCSC:uc001fdt.1 GeneCards:GC01M153954 HGNC:HGNC:9762 HPA:HPA003996
MIM:602672 neXtProt:NX_P51153 PharmGKB:PA34103 InParanoid:P51153
OMA:AMGIVLI PhylomeDB:P51153 ChiTaRS:RAB13 GenomeRNAi:5872
NextBio:22808 ArrayExpress:P51153 Bgee:P51153 CleanEx:HS_RAB13
Genevestigator:P51153 GermOnline:ENSG00000143545 Uniprot:P51153
Length = 203
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 51/161 (31%), Positives = 86/161 (53%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKL+++GD G GKT + R F Y TIG++ KI+ WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQE 68
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVK-N 131
+F + YY I+++D+T +++N+ W + + + +L GNK D++
Sbjct: 69 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAK 128
Query: 132 RQVKAKQVT-FHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
R+V+ +Q R+ ++++E SAKS+ N ++ F LAR +
Sbjct: 129 RKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 169
>UNIPROTKB|F1RFW5 [details] [associations]
symbol:RAB13 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005923 "tight junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005794 GO:GO:0007264 GO:GO:0015031 GO:GO:0005923 CTD:5872
GeneTree:ENSGT00700000104031 KO:K06109 EMBL:CU407290
RefSeq:XP_001927266.2 UniGene:Ssc.27516 Ensembl:ENSSSCT00000007191
GeneID:100154707 KEGG:ssc:100154707 Uniprot:F1RFW5
Length = 203
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 51/161 (31%), Positives = 86/161 (53%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKL+++GD G GKT + R F Y TIG++ KI+ WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQE 68
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVK-N 131
+F + YY I+++D+T +++N+ W + + + +L GNK D++
Sbjct: 69 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAK 128
Query: 132 RQVKAKQVT-FHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
R+V+ +Q R+ ++++E SAKS+ N ++ F LAR +
Sbjct: 129 RKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 169
>UNIPROTKB|I3L5L9 [details] [associations]
symbol:RAB13 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005923 "tight junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005794 GO:GO:0007264 GO:GO:0015031 GO:GO:0005923
GeneTree:ENSGT00700000104031 OMA:AMGIVLI EMBL:CU407290
Ensembl:ENSSSCT00000031505 Uniprot:I3L5L9
Length = 242
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 51/161 (31%), Positives = 86/161 (53%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKL+++GD G GKT + R F Y TIG++ KI+ WDTAGQE
Sbjct: 48 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQE 107
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVK-N 131
+F + YY I+++D+T +++N+ W + + + +L GNK D++
Sbjct: 108 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAK 167
Query: 132 RQVKAKQVT-FHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
R+V+ +Q R+ ++++E SAKS+ N ++ F LAR +
Sbjct: 168 RKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 208
>UNIPROTKB|Q6DUB4 [details] [associations]
symbol:Rab7b "Ras-related protein Rab-7b" species:43137
"Paramecium octaurelia" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005874 "microtubule" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0031912 "oral apparatus"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
PROSITE:PS51419 GO:GO:0005874 EMBL:AY644723 EMBL:AY875981
ProteinModelPortal:Q6DUB4 SMR:Q6DUB4 GO:GO:0031912 Uniprot:Q6DUB4
Length = 206
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 48/167 (28%), Positives = 92/167 (55%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FK++I+GD G GKT+ + +++ F ++Y T+G + + + + WDTAGQE
Sbjct: 9 FKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMIDDRMVTLQIWDTAGQE 68
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVD 128
+F L +Y C ++++D+T ++ ++ +W + + E+ P V+ GNK+D
Sbjct: 69 RFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSWRDEFLMQGQPKDPEHFPFVVLGNKLD 128
Query: 129 -VKNRQVK-AKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKLA 172
R+V+ +K + + N+Q++E+SAK N E+ F +A+ A
Sbjct: 129 KATERKVQESKSQQWCKSHGNIQFFEVSAKDATNIEQAFQDIAKAAA 175
>POMBASE|SPBC1703.10 [details] [associations]
symbol:ypt1 "GTPase Ypt1" species:4896
"Schizosaccharomyces pombe" [GO:0000139 "Golgi membrane"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=IGI]
[GO:0005525 "GTP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IC] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=ISO] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IMP] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IC] [GO:0070317 "negative regulation of G0
to G1 transition" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 PomBase:SPBC1703.10 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005829 GO:GO:0005886 GO:GO:0005634 GO:GO:0006886
GO:GO:0007264 GO:GO:0000139 GO:GO:0070317 GO:GO:0005789
EMBL:CU329671 GO:GO:0003924 GenomeReviews:CU329671_GR
PROSITE:PS51419 GO:GO:0006888 GO:GO:0006995 eggNOG:COG1100
HOGENOM:HOG000233968 KO:K07874 OMA:IDSTPVR EMBL:X52099 EMBL:X15082
PIR:S04590 PIR:T50323 RefSeq:NP_596205.1 ProteinModelPortal:P11620
SMR:P11620 STRING:P11620 PRIDE:P11620 EnsemblFungi:SPBC1703.10.1
GeneID:2539784 KEGG:spo:SPBC1703.10 OrthoDB:EOG49W5QK
NextBio:20800933 Uniprot:P11620
Length = 203
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 55/165 (33%), Positives = 89/165 (53%)
Query: 10 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 69
DY FKL+++GD G GK+ + R + + Y TIGV+ F ++ WDT
Sbjct: 6 DY-LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDT 64
Query: 70 AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVD 128
AGQE+F + YY II++DVT + ++ NV W +++ R E + +L GNK D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSD 124
Query: 129 VKNRQVKAKQVT--FHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
+ +++V V F N+ + E SAK + N E+ FL ++R++
Sbjct: 125 MVDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQI 169
>TAIR|locus:2171943 [details] [associations]
symbol:RABA1c "RAB GTPase homolog A1C" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005773 "vacuole"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016192 "vesicle-mediated
transport" evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005886
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005773
GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100
EMBL:AB012245 KO:K07976 HOGENOM:HOG000233968 EMBL:AF370219
EMBL:AY059111 EMBL:AY084274 IPI:IPI00534558 RefSeq:NP_199387.1
UniGene:At.7538 HSSP:Q15907 ProteinModelPortal:Q9FK68 SMR:Q9FK68
PaxDb:Q9FK68 PRIDE:Q9FK68 EnsemblPlants:AT5G45750.1 GeneID:834614
KEGG:ath:AT5G45750 TAIR:At5g45750 InParanoid:Q9FK68 OMA:QKQIRDS
PhylomeDB:Q9FK68 ProtClustDB:CLSN2685455 Genevestigator:Q9FK68
Uniprot:Q9FK68
Length = 216
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 55/158 (34%), Positives = 87/158 (55%)
Query: 10 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 69
DY FK+V++GD G GK+ + R EF + + TIGVE + I+ WDT
Sbjct: 11 DY-LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDT 69
Query: 70 AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVD 128
AGQE++ + YY A++++DVT T++NV TW ++L + NI ++L GNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSD 129
Query: 129 VKNR-QVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 164
+++ V+ + +F K++L + E SA N E F
Sbjct: 130 LRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAF 167
>ZFIN|ZDB-GENE-040426-1983 [details] [associations]
symbol:rab42a "RAB42, member RAS oncogene family
a" species:7955 "Danio rerio" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-040426-1983
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
eggNOG:COG1100 HOVERGEN:HBG009351 HSSP:P01112 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101664 EMBL:CR385068 OMA:SAKCNSN
EMBL:BC060898 IPI:IPI00498203 RefSeq:NP_998207.1 UniGene:Dr.132981
Ensembl:ENSDART00000046530 GeneID:406315 KEGG:dre:406315 CTD:406315
InParanoid:Q6P977 OrthoDB:EOG4D7Z6M NextBio:20817942 Uniprot:Q6P977
Length = 213
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 53/165 (32%), Positives = 94/165 (56%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG-KIRFYCWDTAGQ 72
F+++++GD GK++ +KR G + +PT+GV+ + G KI+ WDTAGQ
Sbjct: 9 FRIILLGDSTVGKSSLLKRFTDGIYSDVADPTVGVDFYARSIDIEPGVKIKLQLWDTAGQ 68
Query: 73 EKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR--VCENIPIVLCGNKVDV- 129
E+F + YY + +++FD+T R T+ +V WHR++ + ++ +L G+K D+
Sbjct: 69 ERFRSITTSYYRNSVGGLLVFDLTNRKTFDHVREWHREVSEHILPHHMVYILIGHKSDLS 128
Query: 130 KNRQV---KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
++R+V +A+Q+ ++Y E SAK N N E+ F L R +
Sbjct: 129 RDRKVTRDEAEQLA--ADLGIRYVETSAKCNSNVERAFELLTRDI 171
>ZFIN|ZDB-GENE-040801-62 [details] [associations]
symbol:rab35 "RAB35, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040801-62 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 HOVERGEN:HBG009351
CTD:11021 KO:K07876 EMBL:BC077124 IPI:IPI00919647
RefSeq:NP_001003548.1 UniGene:Dr.14855 ProteinModelPortal:Q6DEJ0
SMR:Q6DEJ0 GeneID:445154 KEGG:dre:445154 InParanoid:Q6DEJ0
NextBio:20831916 ArrayExpress:Q6DEJ0 Uniprot:Q6DEJ0
Length = 201
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 55/160 (34%), Positives = 84/160 (52%)
Query: 10 DYPS-FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWD 68
DY FKL+I+GD G GK++ + R F Y TIGV+ N K++ WD
Sbjct: 4 DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVELNGEKVKLQIWD 63
Query: 69 TAGQEKFGGLRDGYY--IHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNK 126
TAGQE+F + YY HG ++++DVT+ ++ NV W ++ + C+++ +L GNK
Sbjct: 64 TAGQERFRTITSTYYRGTHG--VVVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNK 121
Query: 127 VDVKNRQVKAKQVT--FHRKKNLQYYEISAKSNYNFEKPF 164
D N +V F + + +E SAK N N E+ F
Sbjct: 122 NDDPNSKVVETNDAQKFAEQMGISLFETSAKENVNVEEMF 161
>DICTYBASE|DDB_G0271984 [details] [associations]
symbol:rab5A "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0010008 "endosome membrane"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 dictyBase:DDB_G0271984
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 GenomeReviews:CM000151_GR EMBL:AAFI02000007
GO:GO:0010008 PROSITE:PS51419 eggNOG:COG1100 KO:K07976 HSSP:P20339
RefSeq:XP_645357.1 ProteinModelPortal:Q86JP3 SMR:Q86JP3
PRIDE:Q86JP3 EnsemblProtists:DDB0229401 GeneID:8618246
KEGG:ddi:DDB_G0271984 OMA:VDLQESN ProtClustDB:CLSZ2431305
Uniprot:Q86JP3
Length = 201
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 55/161 (34%), Positives = 90/161 (55%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
FKLV++G+ GK++ V R + G F E TIG N ++F WDTAGQE
Sbjct: 10 FKLVLLGEAAVGKSSLVLRFVRGHFLDYQESTIGAAFLAQTVCLNDTTVKFEIWDTAGQE 69
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV-CENIPIVLCGNKVDVK-N 131
++ L YY Q AI+++D+ + +++ W ++L R NI I L GNK+D+
Sbjct: 70 RYHTLAPMYYRGAQAAIVVYDIRSEDSFERAIKWVKELQRQGSPNIVIALAGNKLDLAAK 129
Query: 132 RQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARKL 171
R+V+ + + ++N L + E SAK++ N + F+ +A+KL
Sbjct: 130 RKVETAEAQQYAEENGLLFMETSAKTSQNVNELFVEIAKKL 170
>UNIPROTKB|E1C105 [details] [associations]
symbol:RAB3C "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0008021 "synaptic
vesicle" evidence=IEA] [GO:0017157 "regulation of exocytosis"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0008021 GO:GO:0017157 GeneTree:ENSGT00690000101942
EMBL:AADN02045695 EMBL:AADN02045696 EMBL:AADN02045697
EMBL:AADN02045698 EMBL:AADN02045699 EMBL:AADN02045700
EMBL:AADN02045701 EMBL:AADN02054671 EMBL:AADN02054672
EMBL:AADN02054673 EMBL:AADN02054674 EMBL:AADN02054675
EMBL:AADN02054676 EMBL:AADN02054677 IPI:IPI00599950
Ensembl:ENSGALT00000023749 OMA:SEAMSHS Uniprot:E1C105
Length = 212
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 51/163 (31%), Positives = 86/163 (52%)
Query: 5 SQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRF 64
S Q DY FKL+I+G+ GKT+F+ R+ F + T+G++ F N +I+
Sbjct: 15 SDQNFDY-MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKL 73
Query: 65 YCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLC 123
WDTAGQE++ + YY I+M+D+T ++ V W + +N ++L
Sbjct: 74 QIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILV 133
Query: 124 GNKVDVKNRQVKAKQVTFHRKKNL--QYYEISAKSNYNFEKPF 164
GNK D+++ +V + H + L +++E SAK N N ++ F
Sbjct: 134 GNKCDMEDERVIFTERGKHLAEQLGFEFFETSAKDNINVKQTF 176
>UNIPROTKB|F1P1G4 [details] [associations]
symbol:RAB43 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104044 OMA:LIGDCGT
EMBL:AADN02013932 IPI:IPI00591348 ProteinModelPortal:F1P1G4
Ensembl:ENSGALT00000008038 Uniprot:F1P1G4
Length = 212
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 57/171 (33%), Positives = 94/171 (54%)
Query: 6 QQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFY 65
+++ D+ FKLV++GD GKT V+R TG F ++ TIGV+ +++
Sbjct: 11 EESYDF-LFKLVLIGDASVGKTCLVQRFKTGAFAERQGSTIGVDFTMKSLEIQGKRVKLQ 69
Query: 66 CWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCG 124
WDTAGQE+F + YY AI+ +D++ R ++ ++P W D+ + NI +L G
Sbjct: 70 IWDTAGQERFRTITQSYYRSANGAILAYDISKRGSFLSIPRWIEDVRKYAGSNIVQLLIG 129
Query: 125 NKVDVKN-RQVKAK--QVTFHRKKNLQY-YEISAKSNYNFEKPFLYLARKL 171
NK D+ + R+V+ + Q R N+ E SAK + N E+ F+ +A +L
Sbjct: 130 NKSDLSDLREVQLEEAQSLAERYDNIICAIETSAKDSSNVEEAFVKMATEL 180
>TAIR|locus:2060415 [details] [associations]
symbol:RABH1d "RAB GTPase homolog H1D" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0006891 "intra-Golgi vesicle-mediated transport"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0009827 "plant-type cell wall modification" evidence=RCA]
[GO:0009860 "pollen tube growth" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0007264 GO:GO:0000139 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0016192 GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100
EMBL:AC007168 KO:K07976 HOGENOM:HOG000233968 IPI:IPI00547775
PIR:H84610 RefSeq:NP_179816.1 UniGene:At.52865 HSSP:Q26000
ProteinModelPortal:Q9SID8 SMR:Q9SID8 PaxDb:Q9SID8 PRIDE:Q9SID8
EnsemblPlants:AT2G22290.1 GeneID:816761 KEGG:ath:AT2G22290
TAIR:At2g22290 InParanoid:Q9SID8 OMA:SKGREYG PhylomeDB:Q9SID8
ProtClustDB:CLSN2683734 Genevestigator:Q9SID8 Uniprot:Q9SID8
Length = 207
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 53/163 (32%), Positives = 86/163 (52%)
Query: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
+KLV +GD GKT+ + R + +F+ Y+ TIG++ + +R WDTAGQE
Sbjct: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
Query: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV-CENIPIVLCGNKVD-VKN 131
+F L Y A++++DV RL++ N W ++ ++ IVL GNK D V+
Sbjct: 70 RFRSLIPSYIRDSSVAVVVYDVANRLSFLNTSKWIEEVRNERAGDVIIVLVGNKTDLVEK 129
Query: 132 RQVKAKQVTFH-RKKNLQYYEISAKSNYNFEKPFLYLARKLAG 173
RQV ++ R+ + + E SAK+ +N + F +A L G
Sbjct: 130 RQVSIEEGDSKGREYGVMFIETSAKAGFNIKPLFRKIAAALPG 172
>TAIR|locus:2168103 [details] [associations]
symbol:AT5G59840 species:3702 "Arabidopsis thaliana"
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005794 "Golgi
apparatus" evidence=ISM] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=RCA] [GO:0009506 "plasmodesma"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0009506
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0007264 GO:GO:0015031
EMBL:AB015475 eggNOG:COG1100 HOGENOM:HOG000233968 HSSP:P07560
KO:K07901 OMA:KCDINDK ProtClustDB:CLSN2684795 UniGene:At.29202
UniGene:At.29203 EMBL:BT004152 EMBL:BT005628 IPI:IPI00519307
RefSeq:NP_200792.1 ProteinModelPortal:Q9FJF1 SMR:Q9FJF1
STRING:Q9FJF1 PaxDb:Q9FJF1 PRIDE:Q9FJF1 EnsemblPlants:AT5G59840.1
GeneID:836105 KEGG:ath:AT5G59840 TAIR:At5g59840 InParanoid:Q9FJF1
PhylomeDB:Q9FJF1 ArrayExpress:Q9FJF1 Genevestigator:Q9FJF1
Uniprot:Q9FJF1
Length = 216
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 53/175 (30%), Positives = 93/175 (53%)
Query: 2 ALPSQQTVDYPSF-KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
A P++ DY KL+++GD G GK+ + R G F + TIG++ +
Sbjct: 3 APPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGK 62
Query: 61 KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIP 119
+I+ WDTAGQE+F + YY ++++DVT ++ N+ W R++ + +N+
Sbjct: 63 RIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVN 122
Query: 120 IVLCGNKVDV--KNRQV-KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
+L GNK D+ R V K+K + ++++E SAK+N N E+ F +A+ +
Sbjct: 123 KILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDI 177
>WB|WBGene00004267 [details] [associations]
symbol:rab-3 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA;ISS] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] [GO:0007271 "synaptic transmission, cholinergic"
evidence=IMP] [GO:0040012 "regulation of locomotion" evidence=IMP]
[GO:0007617 "mating behavior" evidence=IMP] [GO:0006935
"chemotaxis" evidence=IMP] [GO:0043051 "regulation of pharyngeal
pumping" evidence=IMP] [GO:0008021 "synaptic vesicle" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0008021
GO:GO:0003924 GO:GO:0007617 GO:GO:0040017 GO:GO:0007271
GO:GO:0006935 GO:GO:0043051 EMBL:FO080599 KO:K07976
HOGENOM:HOG000233968 HSSP:P07560 GeneTree:ENSGT00690000101942
OMA:QLTEQPA UniGene:Cel.19709 GeneID:173971 KEGG:cel:CELE_C18A3.6
UCSC:C18A3.6a CTD:173971 NextBio:881917 RefSeq:NP_001021973.1
ProteinModelPortal:Q95QV3 SMR:Q95QV3 STRING:Q95QV3 PRIDE:Q95QV3
EnsemblMetazoa:C18A3.6a WormBase:C18A3.6a InParanoid:Q95QV3
ArrayExpress:Q95QV3 Uniprot:Q95QV3
Length = 233
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 59/186 (31%), Positives = 95/186 (51%)
Query: 2 ALPSQ--QTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNC 59
A P Q Q DY FKL+I+G+ GKT+F+ R+ F + T+G++ F
Sbjct: 24 ATPGQPDQNFDY-MFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGD 82
Query: 60 GKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENI 118
+++ WDTAGQE++ + YY I+M+D+T ++ +V W + EN
Sbjct: 83 KRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENA 142
Query: 119 PIVLCGNKVDVKNRQV----KAKQVTFHRKKNLQYYEISAKSNYN----FEKPFLYLARK 170
+VL GNK D+ + +V + +Q+ + L+++E SAK N N FEK + K
Sbjct: 143 QVVLVGNKCDMDSERVVSMDRGRQLA--DQLGLEFFETSAKENINVKAVFEKLVEIICDK 200
Query: 171 LAGSTD 176
+A S D
Sbjct: 201 MAESLD 206
>UNIPROTKB|Q94986 [details] [associations]
symbol:rab-3 "Ras-related protein Rab-3" species:6239
"Caenorhabditis elegans" [GO:0006184 "GTP catabolic process"
evidence=ISS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 GO:GO:0008021 GO:GO:0003924 GO:GO:0007617
GO:GO:0040017 GO:GO:0007271 GO:GO:0006935 GO:GO:0043051
GO:GO:0006887 PROSITE:PS51419 eggNOG:COG1100 EMBL:FO080599
KO:K07976 HOGENOM:HOG000233968 GeneTree:ENSGT00690000101942
EMBL:U68265 EMBL:U68266 EMBL:AB112928 RefSeq:NP_001021974.1
UniGene:Cel.19709 ProteinModelPortal:Q94986 SMR:Q94986
STRING:Q94986 PaxDb:Q94986 PRIDE:Q94986 EnsemblMetazoa:C18A3.6b.1
EnsemblMetazoa:C18A3.6b.2 GeneID:173971 KEGG:cel:CELE_C18A3.6
UCSC:C18A3.6a CTD:173971 WormBase:C18A3.6b NextBio:881917
ArrayExpress:Q94986 Uniprot:Q94986
Length = 219
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 59/186 (31%), Positives = 95/186 (51%)
Query: 2 ALPSQ--QTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNC 59
A P Q Q DY FKL+I+G+ GKT+F+ R+ F + T+G++ F
Sbjct: 10 ATPGQPDQNFDY-MFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGD 68
Query: 60 GKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENI 118
+++ WDTAGQE++ + YY I+M+D+T ++ +V W + EN
Sbjct: 69 KRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENA 128
Query: 119 PIVLCGNKVDVKNRQV----KAKQVTFHRKKNLQYYEISAKSNYN----FEKPFLYLARK 170
+VL GNK D+ + +V + +Q+ + L+++E SAK N N FEK + K
Sbjct: 129 QVVLVGNKCDMDSERVVSMDRGRQLA--DQLGLEFFETSAKENINVKAVFEKLVEIICDK 186
Query: 171 LAGSTD 176
+A S D
Sbjct: 187 MAESLD 192
WARNING: HSPs involving 1426 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.140 0.444 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 176 176 0.00081 109 3 11 22 0.38 32
31 0.49 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1676
No. of states in DFA: 595 (63 KB)
Total size of DFA: 172 KB (2101 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.07u 0.11s 16.18t Elapsed: 00:00:01
Total cpu time: 16.10u 0.11s 16.21t Elapsed: 00:00:01
Start: Sat May 11 03:36:48 2013 End: Sat May 11 03:36:49 2013
WARNINGS ISSUED: 2