Your job contains 1 sequence.
>030509
MKYVKPLRLFEQMLKRKVSKRGRFLGLDVGDKYVGLSISDPKNKIASPLSVLLRKKNTID
LMAEDFRSLISEFNLEGFIVGYPFNRQQNAADAVQVKLFIDDLSATKKLEDMKYAYWNEG
FTSKGVELLLNPLDLHPVEYKTILDKFAAVGILQEYLDNANRKVNLKANVLRPIIN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 030509
(176 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:4010713830 - symbol:AT3G52905 species:3702 "Ar... 551 3.0e-53 1
UNIPROTKB|Q71ZG8 - symbol:LMOf2365_1521 "Putative Hollida... 170 7.1e-13 1
UNIPROTKB|Q3AEN4 - symbol:CHY_0542 "Putative Holliday jun... 164 3.1e-12 1
TIGR_CMR|CHY_0542 - symbol:CHY_0542 "conserved hypothetic... 164 3.1e-12 1
UNIPROTKB|Q5LQY2 - symbol:SPO2350 "Putative Holliday junc... 152 5.8e-11 1
TIGR_CMR|SPO_2350 - symbol:SPO_2350 "conserved hypothetic... 152 5.8e-11 1
UNIPROTKB|Q81LK2 - symbol:BAS4282 "Putative Holliday junc... 148 1.5e-10 1
TIGR_CMR|BA_4614 - symbol:BA_4614 "conserved hypothetical... 148 1.5e-10 1
UNIPROTKB|Q2GH06 - symbol:ECH_0460 "Putative Holliday jun... 133 5.9e-09 1
TIGR_CMR|ECH_0460 - symbol:ECH_0460 "conserved hypothetic... 133 5.9e-09 1
UNIPROTKB|P67487 - symbol:MT2631 "Putative Holliday junct... 126 3.3e-08 1
UNIPROTKB|Q3ZAE3 - symbol:DET0051 "Putative Holliday junc... 122 8.7e-08 1
TIGR_CMR|DET_0051 - symbol:DET_0051 "conserved hypothetic... 122 8.7e-08 1
UNIPROTKB|Q0BZU8 - symbol:HNE_2300 "Putative Holliday jun... 110 1.6e-06 1
UNIPROTKB|Q2GL11 - symbol:APH_0332 "Putative Holliday jun... 110 2.0e-05 1
TIGR_CMR|APH_0332 - symbol:APH_0332 "conserved hypothetic... 110 2.0e-05 1
>TAIR|locus:4010713830 [details] [associations]
symbol:AT3G52905 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM;IEA] [GO:0006139 "nucleobase-containing
compound metabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0016788 "hydrolase activity, acting on ester bonds"
evidence=IEA] InterPro:IPR005227 InterPro:IPR006641
InterPro:IPR012337 Pfam:PF03652 SMART:SM00732 GO:GO:0005737
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016740 GO:GO:0006281
GO:GO:0003676 GO:GO:0006310 GO:GO:0016788 SUPFAM:SSF53098
HSSP:O34634 eggNOG:COG0816 HOGENOM:HOG000016953 Gene3D:3.30.420.140
HAMAP:MF_00651 TIGRFAMs:TIGR00250 EMBL:AK117433 IPI:IPI00846278
RefSeq:NP_001078274.1 UniGene:At.71206 ProteinModelPortal:Q8GYR7
SMR:Q8GYR7 STRING:Q8GYR7 PaxDb:Q8GYR7 PRIDE:Q8GYR7
EnsemblPlants:AT3G52905.1 GeneID:5008084 KEGG:ath:AT3G52905
TAIR:At3g52905 OMA:YWDECFT PhylomeDB:Q8GYR7 ProtClustDB:CLSN2691877
Genevestigator:Q8GYR7 Uniprot:Q8GYR7
Length = 170
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 108/165 (65%), Positives = 129/165 (78%)
Query: 1 MKYVKPLRLFEQMLKRKVSKRGRFLGLDVGDKYVGLSISDPKNKIASPLSVLLRKKNTID 60
MKYVKPL L LK KVS GRFLGLDVGDKYVGL+ISDP N +ASPLSVLLRKK+ ID
Sbjct: 1 MKYVKPLSLLGNALKTKVSVPGRFLGLDVGDKYVGLAISDPSNMVASPLSVLLRKKSNID 60
Query: 61 LMAEDFRSLISEFNLEGFIVGYPFNRQQNAADAVQVKLFIDDLSATKKLEDMKYAYWNEG 120
LMA DF++L+ F++ G +VGYPF + N D V V LFI++L T+KL+D+KY YW+E
Sbjct: 61 LMATDFQNLVKAFSVSGLVVGYPFGKLNNVEDVVTVNLFIEELRKTEKLKDVKYTYWDER 120
Query: 121 FTSKGVELLLNPLDLHPVEYKTILDKFAAVGILQEYLDNANRKVN 165
+SK VEL+L PL+LHPV+ KT+LDK AAV ILQEYLD ANR VN
Sbjct: 121 LSSKTVELMLKPLNLHPVQEKTMLDKLAAVVILQEYLDYANRYVN 165
>UNIPROTKB|Q71ZG8 [details] [associations]
symbol:LMOf2365_1521 "Putative Holliday junction resolvase"
species:265669 "Listeria monocytogenes serotype 4b str. F2365"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR005227 InterPro:IPR006641
InterPro:IPR012337 Pfam:PF03652 SMART:SM00732 GO:GO:0005737
GO:GO:0006281 GO:GO:0003676 GO:GO:0006310 GO:GO:0090305
SUPFAM:SSF53098 EMBL:AE017262 GenomeReviews:AE017262_GR
GO:GO:0004518 eggNOG:COG0816 HOGENOM:HOG000016953 KO:K07447
Gene3D:3.30.420.140 HAMAP:MF_00651 TIGRFAMs:TIGR00250 OMA:KNMNGTV
ProtClustDB:PRK00109 RefSeq:YP_014119.1 ProteinModelPortal:Q71ZG8
SMR:Q71ZG8 STRING:Q71ZG8 GeneID:2798572 KEGG:lmf:LMOf2365_1521
PATRIC:20324281 Uniprot:Q71ZG8
Length = 138
Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 45/140 (32%), Positives = 67/140 (47%)
Query: 23 RFLGLDVGDKYVGLSISDPKNKIASPLSVLLRKKNTIDLMAEDFRSLISEFNLEGFIVGY 82
R +GLDVG K VG++ISDP A + + +N + + L+ E+ +E +VG
Sbjct: 2 RIMGLDVGSKTVGVAISDPLGWTAQGVETIQIDENRKQFGYDRVKELVLEYEVEKVVVGL 61
Query: 83 PFNRQQNAAD-AVQVKLFIDDLSATKKLEDMKYAYWNEGFTSKGVELLLNPLDLHPVEYK 141
P N A K++ + L + L W+E T+ E L D+ + K
Sbjct: 62 PKNMNNTIGPRAESSKIYAEVLESRIGLP---VVLWDERLTTSAAERTLIEADVSRKKRK 118
Query: 142 TILDKFAAVGILQEYLDNAN 161
++DK AAV ILQ YLD N
Sbjct: 119 EVIDKLAAVMILQSYLDTTN 138
>UNIPROTKB|Q3AEN4 [details] [associations]
symbol:CHY_0542 "Putative Holliday junction resolvase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR005227 InterPro:IPR006641
InterPro:IPR012337 Pfam:PF03652 SMART:SM00732 GO:GO:0005737
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006281 GO:GO:0003676
GO:GO:0006310 GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0004518
eggNOG:COG0816 HOGENOM:HOG000016953 KO:K07447 Gene3D:3.30.420.140
HAMAP:MF_00651 TIGRFAMs:TIGR00250 OMA:KNMNGTV RefSeq:YP_359400.1
ProteinModelPortal:Q3AEN4 STRING:Q3AEN4 GeneID:3727317
KEGG:chy:CHY_0542 PATRIC:21274231
BioCyc:CHYD246194:GJCN-543-MONOMER Uniprot:Q3AEN4
Length = 138
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 45/137 (32%), Positives = 71/137 (51%)
Query: 23 RFLGLDVGDKYVGLSISDPKNKIASPLSVLLRKKNTIDLMAEDFRSLISEFNLEGFIVGY 82
+ LGLDVGDK +G+++SD A L+V+ R DL E+ + +I ++ ++GY
Sbjct: 2 KVLGLDVGDKKIGVALSDELGLTAQGLTVIYRTSLKKDL--EEIKKIIDLHHVTEVVIGY 59
Query: 83 PFNRQQNAADAVQ-VKLFIDDLSATKKLEDMKYAYWNEGFTSKGVELLLNPLDLHPVEYK 141
P N A + VK F +L K +K +W+E ++ E LL D+ + K
Sbjct: 60 PRNMNGTAGPRAELVKRFARELY---KFTGIKPVFWDERLSTVEAEKLLISGDISRRKRK 116
Query: 142 TILDKFAAVGILQEYLD 158
++DK AA IL YL+
Sbjct: 117 KVIDKLAATLILSGYLN 133
>TIGR_CMR|CHY_0542 [details] [associations]
symbol:CHY_0542 "conserved hypothetical protein TIGR00250"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR005227 InterPro:IPR006641
InterPro:IPR012337 Pfam:PF03652 SMART:SM00732 GO:GO:0005737
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006281 GO:GO:0003676
GO:GO:0006310 GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0004518
eggNOG:COG0816 HOGENOM:HOG000016953 KO:K07447 Gene3D:3.30.420.140
HAMAP:MF_00651 TIGRFAMs:TIGR00250 OMA:KNMNGTV RefSeq:YP_359400.1
ProteinModelPortal:Q3AEN4 STRING:Q3AEN4 GeneID:3727317
KEGG:chy:CHY_0542 PATRIC:21274231
BioCyc:CHYD246194:GJCN-543-MONOMER Uniprot:Q3AEN4
Length = 138
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 45/137 (32%), Positives = 71/137 (51%)
Query: 23 RFLGLDVGDKYVGLSISDPKNKIASPLSVLLRKKNTIDLMAEDFRSLISEFNLEGFIVGY 82
+ LGLDVGDK +G+++SD A L+V+ R DL E+ + +I ++ ++GY
Sbjct: 2 KVLGLDVGDKKIGVALSDELGLTAQGLTVIYRTSLKKDL--EEIKKIIDLHHVTEVVIGY 59
Query: 83 PFNRQQNAADAVQ-VKLFIDDLSATKKLEDMKYAYWNEGFTSKGVELLLNPLDLHPVEYK 141
P N A + VK F +L K +K +W+E ++ E LL D+ + K
Sbjct: 60 PRNMNGTAGPRAELVKRFARELY---KFTGIKPVFWDERLSTVEAEKLLISGDISRRKRK 116
Query: 142 TILDKFAAVGILQEYLD 158
++DK AA IL YL+
Sbjct: 117 KVIDKLAATLILSGYLN 133
>UNIPROTKB|Q5LQY2 [details] [associations]
symbol:SPO2350 "Putative Holliday junction resolvase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR005227 InterPro:IPR006641 InterPro:IPR012337
Pfam:PF03652 SMART:SM00732 GO:GO:0005737 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006281 GO:GO:0003676 GO:GO:0006310
GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0004518 eggNOG:COG0816
HOGENOM:HOG000016953 KO:K07447 Gene3D:3.30.420.140 HAMAP:MF_00651
TIGRFAMs:TIGR00250 OMA:KNMNGTV ProtClustDB:PRK00109
RefSeq:YP_167573.1 ProteinModelPortal:Q5LQY2 GeneID:3194839
KEGG:sil:SPO2350 PATRIC:23378069 Uniprot:Q5LQY2
Length = 154
Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 39/134 (29%), Positives = 67/134 (50%)
Query: 26 GLDVGDKYVGLSISDPKNKIASPLSVLLRKKNTIDLMAEDFRSLISEFNLEGFIVGYPFN 85
GLD+GDK +G+++SD +A+PL + RKK +D A +++ + + G ++G P N
Sbjct: 21 GLDLGDKTIGVAVSDRMRGVATPLETIRRKKFGLDASA--LLAIVEQREIAGIVLGLPRN 78
Query: 86 RQQNAADAVQ-VKLFIDDLSATKKLEDMKYAYWNEGFTSKGVELLLNPLDLHPVEYKTIL 144
+ Q + F +LS +L ++ +W+E ++ E L D ++
Sbjct: 79 MDGSEGPRCQSTRAFARNLS---RLTEVAITFWDERLSTVAAEKALLEADTTRKRRSEVI 135
Query: 145 DKFAAVGILQEYLD 158
D AA ILQ LD
Sbjct: 136 DHVAAAYILQGALD 149
>TIGR_CMR|SPO_2350 [details] [associations]
symbol:SPO_2350 "conserved hypothetical protein TIGR00250"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR005227 InterPro:IPR006641 InterPro:IPR012337
Pfam:PF03652 SMART:SM00732 GO:GO:0005737 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006281 GO:GO:0003676 GO:GO:0006310
GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0004518 eggNOG:COG0816
HOGENOM:HOG000016953 KO:K07447 Gene3D:3.30.420.140 HAMAP:MF_00651
TIGRFAMs:TIGR00250 OMA:KNMNGTV ProtClustDB:PRK00109
RefSeq:YP_167573.1 ProteinModelPortal:Q5LQY2 GeneID:3194839
KEGG:sil:SPO2350 PATRIC:23378069 Uniprot:Q5LQY2
Length = 154
Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 39/134 (29%), Positives = 67/134 (50%)
Query: 26 GLDVGDKYVGLSISDPKNKIASPLSVLLRKKNTIDLMAEDFRSLISEFNLEGFIVGYPFN 85
GLD+GDK +G+++SD +A+PL + RKK +D A +++ + + G ++G P N
Sbjct: 21 GLDLGDKTIGVAVSDRMRGVATPLETIRRKKFGLDASA--LLAIVEQREIAGIVLGLPRN 78
Query: 86 RQQNAADAVQ-VKLFIDDLSATKKLEDMKYAYWNEGFTSKGVELLLNPLDLHPVEYKTIL 144
+ Q + F +LS +L ++ +W+E ++ E L D ++
Sbjct: 79 MDGSEGPRCQSTRAFARNLS---RLTEVAITFWDERLSTVAAEKALLEADTTRKRRSEVI 135
Query: 145 DKFAAVGILQEYLD 158
D AA ILQ LD
Sbjct: 136 DHVAAAYILQGALD 149
>UNIPROTKB|Q81LK2 [details] [associations]
symbol:BAS4282 "Putative Holliday junction resolvase"
species:1392 "Bacillus anthracis" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR005227
InterPro:IPR006641 InterPro:IPR012337 Pfam:PF03652 SMART:SM00732
GO:GO:0005737 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0006281 GO:GO:0003676 GO:GO:0006310
GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0004518 eggNOG:COG0816
HOGENOM:HOG000016953 KO:K07447 Gene3D:3.30.420.140 HAMAP:MF_00651
TIGRFAMs:TIGR00250 RefSeq:NP_846833.1 RefSeq:YP_021261.1
RefSeq:YP_030530.1 ProteinModelPortal:Q81LK2 SMR:Q81LK2
DNASU:1088650 EnsemblBacteria:EBBACT00000010456
EnsemblBacteria:EBBACT00000016012 EnsemblBacteria:EBBACT00000020110
GeneID:1088650 GeneID:2816247 GeneID:2853167 KEGG:ban:BA_4614
KEGG:bar:GBAA_4614 KEGG:bat:BAS4282 OMA:KNMNGTV
ProtClustDB:PRK00109 BioCyc:BANT260799:GJAJ-4338-MONOMER
BioCyc:BANT261594:GJ7F-4486-MONOMER Uniprot:Q81LK2
Length = 137
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 40/138 (28%), Positives = 68/138 (49%)
Query: 23 RFLGLDVGDKYVGLSISDPKNKIASPLSVLLRKKNTIDLMAEDFRSLISEFNLEGFIVGY 82
R LGLDVG K VG++ISD A L + + + L+ +++++ +VG
Sbjct: 2 RILGLDVGTKTVGVAISDEMGWTAQGLETIKINEERGQFGFDRISELVKQYDVDKIVVGL 61
Query: 83 PFNRQQNAADAVQV-KLFIDDLSATKKLEDMKYAYWNEGFTSKGVELLLNPLDLHPVEYK 141
P N + + F ++L ++L + W+E ++ E LL D+ + K
Sbjct: 62 PKNMNGTIGPRGEACQQFAENL---RELLQLDVVMWDERLSTMAAERLLISADVSRKKRK 118
Query: 142 TILDKFAAVGILQEYLDN 159
++DK AAV ILQ +LD+
Sbjct: 119 QVIDKMAAVVILQGFLDS 136
>TIGR_CMR|BA_4614 [details] [associations]
symbol:BA_4614 "conserved hypothetical protein TIGR00250"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR005227 InterPro:IPR006641 InterPro:IPR012337
Pfam:PF03652 SMART:SM00732 GO:GO:0005737 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006281
GO:GO:0003676 GO:GO:0006310 GO:GO:0090305 SUPFAM:SSF53098
GO:GO:0004518 eggNOG:COG0816 HOGENOM:HOG000016953 KO:K07447
Gene3D:3.30.420.140 HAMAP:MF_00651 TIGRFAMs:TIGR00250
RefSeq:NP_846833.1 RefSeq:YP_021261.1 RefSeq:YP_030530.1
ProteinModelPortal:Q81LK2 SMR:Q81LK2 DNASU:1088650
EnsemblBacteria:EBBACT00000010456 EnsemblBacteria:EBBACT00000016012
EnsemblBacteria:EBBACT00000020110 GeneID:1088650 GeneID:2816247
GeneID:2853167 KEGG:ban:BA_4614 KEGG:bar:GBAA_4614 KEGG:bat:BAS4282
OMA:KNMNGTV ProtClustDB:PRK00109
BioCyc:BANT260799:GJAJ-4338-MONOMER
BioCyc:BANT261594:GJ7F-4486-MONOMER Uniprot:Q81LK2
Length = 137
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 40/138 (28%), Positives = 68/138 (49%)
Query: 23 RFLGLDVGDKYVGLSISDPKNKIASPLSVLLRKKNTIDLMAEDFRSLISEFNLEGFIVGY 82
R LGLDVG K VG++ISD A L + + + L+ +++++ +VG
Sbjct: 2 RILGLDVGTKTVGVAISDEMGWTAQGLETIKINEERGQFGFDRISELVKQYDVDKIVVGL 61
Query: 83 PFNRQQNAADAVQV-KLFIDDLSATKKLEDMKYAYWNEGFTSKGVELLLNPLDLHPVEYK 141
P N + + F ++L ++L + W+E ++ E LL D+ + K
Sbjct: 62 PKNMNGTIGPRGEACQQFAENL---RELLQLDVVMWDERLSTMAAERLLISADVSRKKRK 118
Query: 142 TILDKFAAVGILQEYLDN 159
++DK AAV ILQ +LD+
Sbjct: 119 QVIDKMAAVVILQGFLDS 136
>UNIPROTKB|Q2GH06 [details] [associations]
symbol:ECH_0460 "Putative Holliday junction resolvase"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR005227 InterPro:IPR006641 InterPro:IPR012337
Pfam:PF03652 SMART:SM00732 GO:GO:0005737 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0006281 GO:GO:0003676 GO:GO:0006310
GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0004518 eggNOG:COG0816
HOGENOM:HOG000016953 KO:K07447 OMA:ERSIAMP ProtClustDB:CLSK749487
Gene3D:3.30.420.140 HAMAP:MF_00651 TIGRFAMs:TIGR00250
RefSeq:YP_507277.1 ProteinModelPortal:Q2GH06 STRING:Q2GH06
GeneID:3927095 KEGG:ech:ECH_0460 PATRIC:20576392
BioCyc:ECHA205920:GJNR-461-MONOMER Uniprot:Q2GH06
Length = 156
Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 40/142 (28%), Positives = 72/142 (50%)
Query: 18 VSKRGRFLGLDVGDKYVGLSISDPKNKIASPLSVLLRKKNTIDLMAEDFRSLISEFNLEG 77
+ K R +GLD G+K +G+++SD N IA P SV +R+ + DL + S+ E ++
Sbjct: 13 IDKTKRIMGLDFGEKKIGIALSDRTNLIAIPYSVYVRRSSRKDLGS--LYSIFVENDVGS 70
Query: 78 FIVGYPFNRQQNAADAVQ-VKLFIDDLSATKKLEDMKYAYWNEGFTSKGVELLLNPLDLH 136
++G+P + Q V +F + + K+ + +E +++ L ++
Sbjct: 71 IVIGWPLELSGVENELCQKVVMFANRIITRYKINICLH---DERYSTAMATRLAKLANIK 127
Query: 137 PVEYKTILDKFAAVGILQEYLD 158
E + I DK +AV ILQ+ LD
Sbjct: 128 RKESQAIDDKISAVLILQQVLD 149
>TIGR_CMR|ECH_0460 [details] [associations]
symbol:ECH_0460 "conserved hypothetical protein TIGR00250"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR005227 InterPro:IPR006641 InterPro:IPR012337
Pfam:PF03652 SMART:SM00732 GO:GO:0005737 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0006281 GO:GO:0003676 GO:GO:0006310
GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0004518 eggNOG:COG0816
HOGENOM:HOG000016953 KO:K07447 OMA:ERSIAMP ProtClustDB:CLSK749487
Gene3D:3.30.420.140 HAMAP:MF_00651 TIGRFAMs:TIGR00250
RefSeq:YP_507277.1 ProteinModelPortal:Q2GH06 STRING:Q2GH06
GeneID:3927095 KEGG:ech:ECH_0460 PATRIC:20576392
BioCyc:ECHA205920:GJNR-461-MONOMER Uniprot:Q2GH06
Length = 156
Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 40/142 (28%), Positives = 72/142 (50%)
Query: 18 VSKRGRFLGLDVGDKYVGLSISDPKNKIASPLSVLLRKKNTIDLMAEDFRSLISEFNLEG 77
+ K R +GLD G+K +G+++SD N IA P SV +R+ + DL + S+ E ++
Sbjct: 13 IDKTKRIMGLDFGEKKIGIALSDRTNLIAIPYSVYVRRSSRKDLGS--LYSIFVENDVGS 70
Query: 78 FIVGYPFNRQQNAADAVQ-VKLFIDDLSATKKLEDMKYAYWNEGFTSKGVELLLNPLDLH 136
++G+P + Q V +F + + K+ + +E +++ L ++
Sbjct: 71 IVIGWPLELSGVENELCQKVVMFANRIITRYKINICLH---DERYSTAMATRLAKLANIK 127
Query: 137 PVEYKTILDKFAAVGILQEYLD 158
E + I DK +AV ILQ+ LD
Sbjct: 128 RKESQAIDDKISAVLILQQVLD 149
>UNIPROTKB|P67487 [details] [associations]
symbol:MT2631 "Putative Holliday junction resolvase"
species:1773 "Mycobacterium tuberculosis" [GO:0005829 "cytosol"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] InterPro:IPR005227
InterPro:IPR006641 InterPro:IPR012337 Pfam:PF03652 SMART:SM00732
GO:GO:0005829 GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842580 GO:GO:0006281 GO:GO:0003676
GO:GO:0006310 GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0004518
eggNOG:COG0816 KO:K07447 Gene3D:3.30.420.140 HAMAP:MF_00651
TIGRFAMs:TIGR00250 ProtClustDB:PRK00109 PIR:F70660
RefSeq:NP_217070.1 RefSeq:NP_337129.1 RefSeq:YP_006515996.1
ProteinModelPortal:P67487 SMR:P67487 PRIDE:P67487
EnsemblBacteria:EBMYCT00000003326 EnsemblBacteria:EBMYCT00000071997
GeneID:13319274 GeneID:887490 GeneID:925689 KEGG:mtc:MT2631
KEGG:mtu:Rv2554c KEGG:mtv:RVBD_2554c PATRIC:18127534
TubercuList:Rv2554c HOGENOM:HOG000016952 OMA:DERMSTV Uniprot:P67487
Length = 170
Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 37/138 (26%), Positives = 65/138 (47%)
Query: 21 RGRFLGLDVGDKYVGLSISDPKNKIASPLSVLLRKKNTIDLMAEDFRSLISEFNLEGFIV 80
RGR LG+DVG +G++ SDP +A+P+ + R ++ L +L +E IV
Sbjct: 21 RGRRLGIDVGAARIGVACSDPDAILATPVETVRRDRSGKHLRR--LAALAAELEAVEVIV 78
Query: 81 GYPFNRQQNAADAVQVKLFIDDLSATKKLEDMKYAYWNEGFTSKGVELLLNPLDLHPVEY 140
G P + Q + + + A +++ +E T+ + L + E
Sbjct: 79 GLPRTLADRIGRSAQDAIELAEALA-RRVSPTPVRLADERLTTVSAQRSLRQAGVRASEQ 137
Query: 141 KTILDKFAAVGILQEYLD 158
+ ++D+ AAV ILQ +LD
Sbjct: 138 RAVIDQAAAVAILQSWLD 155
>UNIPROTKB|Q3ZAE3 [details] [associations]
symbol:DET0051 "Putative Holliday junction resolvase"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR005227 InterPro:IPR006641 InterPro:IPR012337
Pfam:PF03652 SMART:SM00732 GO:GO:0005737 GO:GO:0006281
GO:GO:0003676 GO:GO:0006310 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0004518 eggNOG:COG0816
HOGENOM:HOG000016953 KO:K07447 OMA:ERSIAMP Gene3D:3.30.420.140
HAMAP:MF_00651 TIGRFAMs:TIGR00250 RefSeq:YP_180806.1
ProteinModelPortal:Q3ZAE3 STRING:Q3ZAE3 GeneID:3229044
KEGG:det:DET0051 PATRIC:21607205 ProtClustDB:CLSK836769
BioCyc:DETH243164:GJNF-51-MONOMER Uniprot:Q3ZAE3
Length = 133
Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 40/135 (29%), Positives = 69/135 (51%)
Query: 29 VGDKYVGLSISDPKNKIASPLSVLLRKKNTIDLMAEDFRSLISEFNLEGFIVGYPFNRQQ 88
+GDK++G+++SDP +ASPL V+LR+ + + E+ +L+ + ++G P +
Sbjct: 1 MGDKWIGVALSDPLRILASPL-VILRRDDDAKTV-ENIEALVKTHQPDLLVIGLPVSLNG 58
Query: 89 NAA-DAVQVKLFIDDLSATKKLEDMKYAYWNEGFTSKGVELLLNPLDLHPVEYKTILDKF 147
A +VK F LS + E + + +E F++ +N + KT+ D
Sbjct: 59 TIGPQAEKVKAFSGLLSQSLNTEII---FRDERFSTDEARRKMNDSGKNN---KTVRDDA 112
Query: 148 AAVG-ILQEYLDNAN 161
AA ILQ+YLD N
Sbjct: 113 AAAAVILQDYLDETN 127
>TIGR_CMR|DET_0051 [details] [associations]
symbol:DET_0051 "conserved hypothetical protein TIGR00250"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR005227 InterPro:IPR006641 InterPro:IPR012337
Pfam:PF03652 SMART:SM00732 GO:GO:0005737 GO:GO:0006281
GO:GO:0003676 GO:GO:0006310 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0004518 eggNOG:COG0816
HOGENOM:HOG000016953 KO:K07447 OMA:ERSIAMP Gene3D:3.30.420.140
HAMAP:MF_00651 TIGRFAMs:TIGR00250 RefSeq:YP_180806.1
ProteinModelPortal:Q3ZAE3 STRING:Q3ZAE3 GeneID:3229044
KEGG:det:DET0051 PATRIC:21607205 ProtClustDB:CLSK836769
BioCyc:DETH243164:GJNF-51-MONOMER Uniprot:Q3ZAE3
Length = 133
Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 40/135 (29%), Positives = 69/135 (51%)
Query: 29 VGDKYVGLSISDPKNKIASPLSVLLRKKNTIDLMAEDFRSLISEFNLEGFIVGYPFNRQQ 88
+GDK++G+++SDP +ASPL V+LR+ + + E+ +L+ + ++G P +
Sbjct: 1 MGDKWIGVALSDPLRILASPL-VILRRDDDAKTV-ENIEALVKTHQPDLLVIGLPVSLNG 58
Query: 89 NAA-DAVQVKLFIDDLSATKKLEDMKYAYWNEGFTSKGVELLLNPLDLHPVEYKTILDKF 147
A +VK F LS + E + + +E F++ +N + KT+ D
Sbjct: 59 TIGPQAEKVKAFSGLLSQSLNTEII---FRDERFSTDEARRKMNDSGKNN---KTVRDDA 112
Query: 148 AAVG-ILQEYLDNAN 161
AA ILQ+YLD N
Sbjct: 113 AAAAVILQDYLDETN 127
>UNIPROTKB|Q0BZU8 [details] [associations]
symbol:HNE_2300 "Putative Holliday junction resolvase"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR005227 InterPro:IPR006641 InterPro:IPR012337
Pfam:PF03652 SMART:SM00732 GO:GO:0005737 GO:GO:0006281
GO:GO:0003676 GO:GO:0006310 GO:GO:0090305 SUPFAM:SSF53098
GO:GO:0004518 EMBL:CP000158 GenomeReviews:CP000158_GR
eggNOG:COG0816 HOGENOM:HOG000016953 KO:K07447 OMA:ERSIAMP
Gene3D:3.30.420.140 HAMAP:MF_00651 TIGRFAMs:TIGR00250
RefSeq:YP_760995.1 ProteinModelPortal:Q0BZU8 STRING:Q0BZU8
GeneID:4289548 KEGG:hne:HNE_2300 PATRIC:32217441
BioCyc:HNEP228405:GI69-2322-MONOMER Uniprot:Q0BZU8
Length = 151
Score = 110 (43.8 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 37/145 (25%), Positives = 63/145 (43%)
Query: 20 KRGRFLGLDVGDKYVGLSISDPKNKIASPLSVLLRKKNTIDLMAEDFRSLISEFNLEGFI 79
+ G LG+D G +G++ +D +ASP+ +L+KK L E + E G I
Sbjct: 11 REGVLLGIDPGTATIGVAATDRIRMMASPVETILKKKLAPSL--ERLLHIYDERAAVGLI 68
Query: 80 VGYPFNRQQNAADAVQ-VKLFIDDLSATKKLEDMKYAYWNEGFTSKGVELLLNPLDLHPV 138
VG P N + Q V+ + L K+ D+ + +E ++S ++
Sbjct: 69 VGLPLNVDGSMGPRAQSVRTLVSSLL---KVRDLPVTFQDERYSSAEAGDIMRAAGATRR 125
Query: 139 EYKTILDKFAAVGILQEYLDNANRK 163
+ +D AA ILQ+ L R+
Sbjct: 126 NREARIDASAAAVILQDALSRLERR 150
>UNIPROTKB|Q2GL11 [details] [associations]
symbol:APH_0332 "Putative Holliday junction resolvase"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR005227 InterPro:IPR006641 InterPro:IPR012337
Pfam:PF03652 SMART:SM00732 GO:GO:0005737 GO:GO:0006281
GO:GO:0003676 GO:GO:0006310 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0004518 RefSeq:YP_504940.1
ProteinModelPortal:Q2GL11 STRING:Q2GL11 GeneID:3930978
KEGG:aph:APH_0332 PATRIC:20949248 eggNOG:COG0816
HOGENOM:HOG000016953 KO:K07447 OMA:ERSIAMP ProtClustDB:CLSK749487
BioCyc:APHA212042:GHPM-361-MONOMER Gene3D:3.30.420.140
HAMAP:MF_00651 TIGRFAMs:TIGR00250 Uniprot:Q2GL11
Length = 166
Score = 110 (43.8 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 44/139 (31%), Positives = 64/139 (46%)
Query: 23 RFLGLDVGDKYVGLSISDPKNKIASPLSVLLRKKNTIDLMAEDFRSLISEFNLEGFIVGY 82
R LG+D G++ +GL++SDP IA P SV R+ DL E L SE + ++G
Sbjct: 18 RILGIDFGERKIGLALSDPTYLIAIPHSVYHRRNMRQDL-GELSAVLRSE-DAAVVVMGN 75
Query: 83 PFNRQQNAADAVQ-VKLFIDDLSATKKLEDMKYAYWNEGFTSKGVELLLNPLDLHPVEYK 141
P + Q V+ F L KK Y + +E +T+ L E +
Sbjct: 76 PLQSDGLEGEMCQIVRAFAQKL--IKKSGVSIYLH-DERYTTAMASRATREAGLRRKESQ 132
Query: 142 TILDKFAAVGILQEYLDNA 160
I DK +A +LQ+ LD A
Sbjct: 133 KIDDKISAALVLQQVLDIA 151
>TIGR_CMR|APH_0332 [details] [associations]
symbol:APH_0332 "conserved hypothetical protein TIGR00250"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR005227 InterPro:IPR006641 InterPro:IPR012337
Pfam:PF03652 SMART:SM00732 GO:GO:0005737 GO:GO:0006281
GO:GO:0003676 GO:GO:0006310 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0004518 RefSeq:YP_504940.1
ProteinModelPortal:Q2GL11 STRING:Q2GL11 GeneID:3930978
KEGG:aph:APH_0332 PATRIC:20949248 eggNOG:COG0816
HOGENOM:HOG000016953 KO:K07447 OMA:ERSIAMP ProtClustDB:CLSK749487
BioCyc:APHA212042:GHPM-361-MONOMER Gene3D:3.30.420.140
HAMAP:MF_00651 TIGRFAMs:TIGR00250 Uniprot:Q2GL11
Length = 166
Score = 110 (43.8 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 44/139 (31%), Positives = 64/139 (46%)
Query: 23 RFLGLDVGDKYVGLSISDPKNKIASPLSVLLRKKNTIDLMAEDFRSLISEFNLEGFIVGY 82
R LG+D G++ +GL++SDP IA P SV R+ DL E L SE + ++G
Sbjct: 18 RILGIDFGERKIGLALSDPTYLIAIPHSVYHRRNMRQDL-GELSAVLRSE-DAAVVVMGN 75
Query: 83 PFNRQQNAADAVQ-VKLFIDDLSATKKLEDMKYAYWNEGFTSKGVELLLNPLDLHPVEYK 141
P + Q V+ F L KK Y + +E +T+ L E +
Sbjct: 76 PLQSDGLEGEMCQIVRAFAQKL--IKKSGVSIYLH-DERYTTAMASRATREAGLRRKESQ 132
Query: 142 TILDKFAAVGILQEYLDNA 160
I DK +A +LQ+ LD A
Sbjct: 133 KIDDKISAALVLQQVLDIA 151
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.139 0.391 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 176 176 0.00081 109 3 11 22 0.40 32
31 0.49 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 539 (57 KB)
Total size of DFA: 130 KB (2084 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.53u 0.20s 16.73t Elapsed: 00:00:01
Total cpu time: 16.53u 0.20s 16.73t Elapsed: 00:00:01
Start: Sat May 11 03:51:35 2013 End: Sat May 11 03:51:36 2013