Query 030512
Match_columns 176
No_of_seqs 91 out of 93
Neff 3.6
Searched_HMMs 13730
Date Tue Mar 26 00:14:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030512.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/030512hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1wmia1 d.298.1.2 (A:1-88) Hyp 62.3 2.2 0.00016 27.8 2.4 21 83-104 17-37 (88)
2 d1mu2a2 e.8.1.2 (A:3-429) HIV- 57.2 4.7 0.00034 34.0 4.2 42 80-121 20-73 (427)
3 d2zd1b1 e.8.1.2 (B:5-428) HIV- 37.1 13 0.00095 31.1 3.8 39 82-120 20-70 (424)
4 d2ywqa1 d.204.1.1 (A:1-95) Rib 37.0 8.6 0.00063 24.9 2.1 27 78-104 7-33 (95)
5 d1uxda_ a.35.1.5 (A:) Fructose 35.5 9 0.00066 23.9 1.9 27 74-100 20-46 (59)
6 d2gb3a1 c.67.1.1 (A:4-392) AAT 35.3 27 0.0019 26.5 5.1 54 80-133 172-237 (389)
7 d1ztwa1 e.8.1.2 (A:24-278) MML 32.7 23 0.0016 26.9 4.3 42 80-121 39-90 (255)
8 d1vlaa_ d.227.1.2 (A:) Hypothe 31.7 20 0.0015 24.1 3.5 35 86-121 106-142 (144)
9 d2hsga1 a.35.1.5 (A:2-58) Gluc 31.6 16 0.0011 22.7 2.6 18 83-100 27-44 (57)
10 d1qpza1 a.35.1.5 (A:2-58) Puri 31.5 16 0.0012 22.6 2.7 18 83-100 26-43 (57)
11 d2i32a1 b.1.22.1 (A:1-154) Ant 31.5 13 0.00094 27.8 2.6 19 106-127 32-50 (154)
12 d1imua_ d.204.1.1 (A:) Ribosom 27.2 30 0.0022 22.7 3.7 27 78-104 6-32 (107)
13 d2ov9a1 d.38.1.5 (A:7-209) Hyp 25.7 42 0.003 24.8 4.7 39 66-104 26-64 (203)
14 d1l4sa_ d.204.1.1 (A:) Ribosom 23.9 21 0.0015 23.8 2.3 27 78-104 5-31 (112)
15 d2fbia1 a.4.5.28 (A:5-140) Pro 23.1 16 0.0012 24.4 1.6 22 83-104 115-136 (136)
16 d1efaa1 a.35.1.5 (A:2-60) Lac 22.9 52 0.0038 20.3 4.0 18 83-100 28-45 (59)
17 d2a6sa1 d.298.1.1 (A:1-83) Tox 22.9 34 0.0025 22.6 3.2 33 84-117 19-56 (83)
18 d1msza_ d.68.7.1 (A:) SmuBP-2 21.8 42 0.0031 20.7 3.4 37 63-99 1-41 (62)
19 d1wzaa1 b.71.1.1 (A:437-515) B 20.8 12 0.00086 24.9 0.4 21 105-125 32-52 (79)
20 d1r3na1 c.56.5.4 (A:18-247,A:3 20.7 70 0.0051 25.8 5.4 80 58-139 9-114 (322)
21 d2gu3a1 d.17.1.6 (A:99-161) Un 20.5 27 0.0019 22.3 2.2 49 97-151 9-62 (63)
No 1
>d1wmia1 d.298.1.2 (A:1-88) Hypothetical protein PHS013 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=62.34 E-value=2.2 Score=27.79 Aligned_cols=21 Identities=24% Similarity=0.161 Sum_probs=16.7
Q ss_pred cCCHHHHHHHHHHHHHHhhhCC
Q 030512 83 SLAKEEHKEVAEVAQELQKYCV 104 (176)
Q Consensus 83 ~aS~e~r~~V~~~i~qLE~~np 104 (176)
.+.+.++++|.+.+.+|+. ||
T Consensus 17 kL~~~~~~~I~~~l~~L~~-~P 37 (88)
T d1wmia1 17 SLPKAHYRRFLEFRDILEY-EP 37 (88)
T ss_dssp TSCHHHHHHHHHHHHHHTT-CS
T ss_pred hCCHHHHHHHHHHHHHHHh-Cc
Confidence 3578889999999988866 55
No 2
>d1mu2a2 e.8.1.2 (A:3-429) HIV-1 reverse transcriptase {Human immunodeficiency virus type 2 [TaxId: 11709]}
Probab=57.16 E-value=4.7 Score=34.04 Aligned_cols=42 Identities=19% Similarity=0.390 Sum_probs=29.9
Q ss_pred CCccCCHHHHHHHHHHHHHHhhhCC------CCCCCCCCc------cceEEEEE
Q 030512 80 GGVSLAKEEHKEVAEVAQELQKYCV------EAPVKCPLI------FGEWDVVY 121 (176)
Q Consensus 80 RG~~aS~e~r~~V~~~i~qLE~~np------p~Pl~spLL------~G~W~LlY 121 (176)
|-.-+++++++++.+++++|++.+. ..|-.+|.+ .|+||++-
T Consensus 20 kq~pl~~ek~~al~~~i~ell~~G~I~~~ps~Sp~~sPvf~V~KKd~gk~Rl~v 73 (427)
T d1mu2a2 20 RQWPLTKEKIEALKEICEKMEKEGQLEEAPPTNPYNTPTFAIKKKDKNKWRMLI 73 (427)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHTSEEECCTTCCCBBCEEECCCCC----CEEE
T ss_pred CCCCCCHHHHHHHHHHHHHHHHCCeEEeCCCCCcCcCceEEEEcCCCCCcEEEE
Confidence 4467899999999999999999763 356677733 48999974
No 3
>d2zd1b1 e.8.1.2 (B:5-428) HIV-1 reverse transcriptase {Human immunodeficiency virus type 1 [TaxId: 11676]}
Probab=37.08 E-value=13 Score=31.12 Aligned_cols=39 Identities=26% Similarity=0.456 Sum_probs=30.8
Q ss_pred ccCCHHHHHHHHHHHHHHhhhCC------CCCCCCCC-c----cc-eEEEE
Q 030512 82 VSLAKEEHKEVAEVAQELQKYCV------EAPVKCPL-I----FG-EWDVV 120 (176)
Q Consensus 82 ~~aS~e~r~~V~~~i~qLE~~np------p~Pl~spL-L----~G-~W~Ll 120 (176)
.-+|+++++++.++|++|++.+. ..|-.+|. + +| +||++
T Consensus 20 ~pLs~ek~~al~~~i~~ll~~G~I~~~~s~Sp~~sPvf~V~KKdg~k~R~~ 70 (424)
T d2zd1b1 20 WPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKL 70 (424)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTSEEECCTTCCCBBCEEEECCTTCSSCEEE
T ss_pred CCCCHHHHHHHHHHHHHHHHCCeeEecCCCCCCcCCeEEEEeCCCCceEEE
Confidence 45899999999999999999864 35667773 2 36 69998
No 4
>d2ywqa1 d.204.1.1 (A:1-95) Ribosome binding protein Y (YfiA homologue) {Thermus thermophilus [TaxId: 274]}
Probab=36.97 E-value=8.6 Score=24.89 Aligned_cols=27 Identities=11% Similarity=0.142 Sum_probs=24.9
Q ss_pred CCCCccCCHHHHHHHHHHHHHHhhhCC
Q 030512 78 SDGGVSLAKEEHKEVAEVAQELQKYCV 104 (176)
Q Consensus 78 tdRG~~aS~e~r~~V~~~i~qLE~~np 104 (176)
+.|++.+|++-|+.|.+-+++|+++.+
T Consensus 7 tgr~~~lt~al~~~ve~kl~kL~k~~~ 33 (95)
T d2ywqa1 7 IGRNLEITDAIRDYVEKKLARLDRYQD 33 (95)
T ss_dssp EEETSCCCHHHHHHHHHHHHGGGGSCS
T ss_pred EEECCccCHHHHHHHHHHHHHHHHhCC
Confidence 578999999999999999999999976
No 5
>d1uxda_ a.35.1.5 (A:) Fructose repressor (FruR), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=35.50 E-value=9 Score=23.92 Aligned_cols=27 Identities=15% Similarity=0.195 Sum_probs=20.2
Q ss_pred hhccCCCCccCCHHHHHHHHHHHHHHh
Q 030512 74 KVNQSDGGVSLAKEEHKEVAEVAQELQ 100 (176)
Q Consensus 74 aIagtdRG~~aS~e~r~~V~~~i~qLE 100 (176)
+|.|.......+++.|++|.+++++|.
T Consensus 20 vLn~~~~~~~vs~~tr~rV~~~a~~lg 46 (59)
T d1uxda_ 20 VINGKAKQYRVSDKTVEKVMAVVREHN 46 (59)
T ss_dssp HHHTCGGGTTCTTTTHHHHHHHHHHHT
T ss_pred HHcCCCCcCcCCHHHHHHHHHHHHHHC
Confidence 344444444589999999999999984
No 6
>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]}
Probab=35.30 E-value=27 Score=26.54 Aligned_cols=54 Identities=19% Similarity=0.170 Sum_probs=37.2
Q ss_pred CCccCCHHHHHHHHHHHHHH-------hhhCC----CCCCCCC-CccceEEEEEecCCCCCCCCcc
Q 030512 80 GGVSLAKEEHKEVAEVAQEL-------QKYCV----EAPVKCP-LIFGEWDVVYCSVPTSPGGGYR 133 (176)
Q Consensus 80 RG~~aS~e~r~~V~~~i~qL-------E~~np----p~Pl~sp-LL~G~W~LlYTSs~~~~GG~~R 133 (176)
-|...|.+++++|.+++.+- |.+.- +.+.... ....+..++|++|.....+++|
T Consensus 172 tG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~v~~s~sK~~~~~GlR 237 (389)
T d2gb3a1 172 TGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSACGAR 237 (389)
T ss_dssp TCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTTTCGGGC
T ss_pred ccccchHHHHHHHHhhcccCCEEEEEeccccccccccccccccccccccccccccccccccCcccc
Confidence 47889999999999999884 44421 2222222 4555667788888887777788
No 7
>d1ztwa1 e.8.1.2 (A:24-278) MMLV reverse transcriptase {Moloney murine leukemia virus, MoMLV [TaxId: 11801]}
Probab=32.70 E-value=23 Score=26.85 Aligned_cols=42 Identities=17% Similarity=0.288 Sum_probs=32.3
Q ss_pred CCccCCHHHHHHHHHHHHHHhhhCC----CCCCCCCC--c----cceEEEEE
Q 030512 80 GGVSLAKEEHKEVAEVAQELQKYCV----EAPVKCPL--I----FGEWDVVY 121 (176)
Q Consensus 80 RG~~aS~e~r~~V~~~i~qLE~~np----p~Pl~spL--L----~G~W~LlY 121 (176)
|-...++++++++.+.|++|.+.+. ..|-.+|. + .|+||++-
T Consensus 39 ~~~~~~~~~~~~l~~~i~~ll~~G~I~p~~s~~~sp~~~V~Kk~~~~~R~v~ 90 (255)
T d1ztwa1 39 KQYPMSQEARLGIKPHIQRLLDQGILVPCQSPWNTPLLPVKKPGTNDYRPVQ 90 (255)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHTSEEEECCSCBCCEEECCSSSSCCCCEEE
T ss_pred CCCCCCHHHHHHHHHHHHHHhhhceeeecCCCcccccccccccccceEEEee
Confidence 3467899999999999999998874 46667772 2 36788874
No 8
>d1vlaa_ d.227.1.2 (A:) Hypothetical protein TM0919 {Thermotoga maritima [TaxId: 2336]}
Probab=31.74 E-value=20 Score=24.14 Aligned_cols=35 Identities=29% Similarity=0.556 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHH-HhhhCC-CCCCCCCCccceEEEEE
Q 030512 86 KEEHKEVAEVAQE-LQKYCV-EAPVKCPLIFGEWDVVY 121 (176)
Q Consensus 86 ~e~r~~V~~~i~q-LE~~np-p~Pl~spLL~G~W~LlY 121 (176)
+.+.+++.+++.+ .|++|| .+-|+.+ +.=+|++.+
T Consensus 106 ~~~~e~~~~~i~~a~~k~CpV~~tL~~~-i~I~~evv~ 142 (144)
T d1vlaa_ 106 EPPKDKVEKAVQLSQEKYCSVSAILKCS-SKVTYEIVY 142 (144)
T ss_dssp SCCHHHHHHHHHHHHHTSCTTTTTBCCS-SCCEEEEEE
T ss_pred CCCHHHHHHHHHHHhccCCchhHHcCCC-CeEEEEEEe
Confidence 3456677777775 899999 8888765 233677776
No 9
>d2hsga1 a.35.1.5 (A:2-58) Glucose-resistance amylase regulator CcpA, N-terminal domain {Bacillus megaterium [TaxId: 1404]}
Probab=31.61 E-value=16 Score=22.68 Aligned_cols=18 Identities=22% Similarity=0.314 Sum_probs=16.3
Q ss_pred cCCHHHHHHHHHHHHHHh
Q 030512 83 SLAKEEHKEVAEVAQELQ 100 (176)
Q Consensus 83 ~aS~e~r~~V~~~i~qLE 100 (176)
..+++.|++|.+++++|.
T Consensus 27 ~Vs~~tr~rV~~aa~~lg 44 (57)
T d2hsga1 27 NVKPSTRKKVLETIERLG 44 (57)
T ss_dssp TSCHHHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHHHHC
Confidence 489999999999999984
No 10
>d1qpza1 a.35.1.5 (A:2-58) Purine repressor (PurR), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=31.55 E-value=16 Score=22.61 Aligned_cols=18 Identities=28% Similarity=0.314 Sum_probs=16.3
Q ss_pred cCCHHHHHHHHHHHHHHh
Q 030512 83 SLAKEEHKEVAEVAQELQ 100 (176)
Q Consensus 83 ~aS~e~r~~V~~~i~qLE 100 (176)
.++++.|++|.+++++|.
T Consensus 26 ~vs~~tr~rV~~~a~~lg 43 (57)
T d1qpza1 26 FVAEETRNAVWAAIKELH 43 (57)
T ss_dssp CCCHHHHHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHHHHHHC
Confidence 479999999999999984
No 11
>d2i32a1 b.1.22.1 (A:1-154) Anti-silencing protein 1, ASF1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.47 E-value=13 Score=27.84 Aligned_cols=19 Identities=26% Similarity=0.625 Sum_probs=15.2
Q ss_pred CCCCCCCccceEEEEEecCCCC
Q 030512 106 APVKCPLIFGEWDVVYCSVPTS 127 (176)
Q Consensus 106 ~Pl~spLL~G~W~LlYTSs~~~ 127 (176)
+||+.+| +|+++|..|++.
T Consensus 32 e~L~~dl---eWkliYVgSa~~ 50 (154)
T d2i32a1 32 EDLSEDL---EWKIIYVGSAES 50 (154)
T ss_dssp SCCSSCE---EEEEEEESCSSC
T ss_pred ccCCCCc---EEEEEEEecCCC
Confidence 4566665 899999999976
No 12
>d1imua_ d.204.1.1 (A:) Ribosome binding protein Y (YfiA homologue) {Haemophilus influenzae [TaxId: 727]}
Probab=27.25 E-value=30 Score=22.70 Aligned_cols=27 Identities=11% Similarity=0.192 Sum_probs=24.8
Q ss_pred CCCCccCCHHHHHHHHHHHHHHhhhCC
Q 030512 78 SDGGVSLAKEEHKEVAEVAQELQKYCV 104 (176)
Q Consensus 78 tdRG~~aS~e~r~~V~~~i~qLE~~np 104 (176)
+.|++.+|++-++.|.+-+..|+++.+
T Consensus 6 ~~r~~~lt~al~~~i~~kl~kl~k~~~ 32 (107)
T d1imua_ 6 TSKQMDITPAIREHLEERLAKLGKWQT 32 (107)
T ss_dssp CCSSSCCCHHHHHHHHHHHHHHHTSSC
T ss_pred EEEcCcCCHHHHHHHHHHHHHHHhhCC
Confidence 578999999999999999999999865
No 13
>d2ov9a1 d.38.1.5 (A:7-209) Hypothetical protein RHA1_ro05818 {Rhodococcus sp. RHA1 [TaxId: 101510]}
Probab=25.73 E-value=42 Score=24.81 Aligned_cols=39 Identities=15% Similarity=0.244 Sum_probs=34.4
Q ss_pred HHHHHHHHhhccCCCCccCCHHHHHHHHHHHHHHhhhCC
Q 030512 66 DLVASILSKVNQSDGGVSLAKEEHKEVAEVAQELQKYCV 104 (176)
Q Consensus 66 ~Lk~~LL~aIagtdRG~~aS~e~r~~V~~~i~qLE~~np 104 (176)
+-..+|.+++..++-+-..-.+-+++|++++++|+...+
T Consensus 26 ~a~R~l~d~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~ 64 (203)
T d2ov9a1 26 DAARRVVDALLRTDRGNANLERVAEELNSIAGHLEEHAP 64 (203)
T ss_dssp HHHHHHHHHHHHSCTTCTTHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHhhhcccc
Confidence 445689999999999999999999999999999998765
No 14
>d1l4sa_ d.204.1.1 (A:) Ribosome binding protein Y (YfiA homologue) {Escherichia coli [TaxId: 562]}
Probab=23.88 E-value=21 Score=23.80 Aligned_cols=27 Identities=15% Similarity=0.263 Sum_probs=24.9
Q ss_pred CCCCccCCHHHHHHHHHHHHHHhhhCC
Q 030512 78 SDGGVSLAKEEHKEVAEVAQELQKYCV 104 (176)
Q Consensus 78 tdRG~~aS~e~r~~V~~~i~qLE~~np 104 (176)
|.|++.+|+.-|+.|.+-+.+|+++.+
T Consensus 5 t~r~~~lt~al~~~i~~kl~kl~k~~~ 31 (112)
T d1l4sa_ 5 TSKQMEITPAIRQHVADRLAKLEKWQT 31 (112)
T ss_dssp EESSSCCCHHHHHHHHHHHHHCTTTCS
T ss_pred EEeCCccCHHHHHHHHHHHHHHHHhcC
Confidence 678999999999999999999998875
No 15
>d2fbia1 a.4.5.28 (A:5-140) Probable transcriptional regulator PA4135 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=23.09 E-value=16 Score=24.39 Aligned_cols=22 Identities=23% Similarity=0.308 Sum_probs=19.7
Q ss_pred cCCHHHHHHHHHHHHHHhhhCC
Q 030512 83 SLAKEEHKEVAEVAQELQKYCV 104 (176)
Q Consensus 83 ~aS~e~r~~V~~~i~qLE~~np 104 (176)
.+++++++.+.+++.+|+..+|
T Consensus 115 ~l~~ee~~~l~~~L~~l~~~~p 136 (136)
T d2fbia1 115 RFGEEKLAQLLELLNELKKIKP 136 (136)
T ss_dssp HHCHHHHHHHHHHHHHHHTTCC
T ss_pred CCCHHHHHHHHHHHHHHHccCC
Confidence 3689999999999999998887
No 16
>d1efaa1 a.35.1.5 (A:2-60) Lac repressor (LacR), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=22.95 E-value=52 Score=20.28 Aligned_cols=18 Identities=17% Similarity=0.322 Sum_probs=16.0
Q ss_pred cCCHHHHHHHHHHHHHHh
Q 030512 83 SLAKEEHKEVAEVAQELQ 100 (176)
Q Consensus 83 ~aS~e~r~~V~~~i~qLE 100 (176)
..+++.|++|.+++++|.
T Consensus 28 ~vs~~tr~rI~~~a~~lg 45 (59)
T d1efaa1 28 HVSAKTREKVEAAMAELN 45 (59)
T ss_dssp SCCTHHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHHHHC
Confidence 379999999999999884
No 17
>d2a6sa1 d.298.1.1 (A:1-83) Toxin YoeB {Escherichia coli [TaxId: 562]}
Probab=22.89 E-value=34 Score=22.55 Aligned_cols=33 Identities=21% Similarity=0.332 Sum_probs=22.9
Q ss_pred CCHHHHHHHHHHHHHHhhh--CC---CCCCCCCCccceE
Q 030512 84 LAKEEHKEVAEVAQELQKY--CV---EAPVKCPLIFGEW 117 (176)
Q Consensus 84 aS~e~r~~V~~~i~qLE~~--np---p~Pl~spLL~G~W 117 (176)
..+...+.|.++++++... ++ ||||+. -+.|-|
T Consensus 19 ~d~k~~kkI~~ll~~i~~~p~~g~gkpE~Lkg-~l~g~w 56 (83)
T d2a6sa1 19 TDKRIVKKINELIKDTRRTPFEGKGKPEPLKH-NLSGFW 56 (83)
T ss_dssp TCHHHHHHHHHHHHHHHHSTTSSTTCCEECCG-GGTTCE
T ss_pred hCHHHHHHHHHHHHHHHhCcCCCCCCCccccC-CCCCEE
Confidence 3577888999999999762 22 677764 345555
No 18
>d1msza_ d.68.7.1 (A:) SmuBP-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.81 E-value=42 Score=20.70 Aligned_cols=37 Identities=22% Similarity=0.292 Sum_probs=29.8
Q ss_pred ChhHHHHHHHHhhccCCCCcc----CCHHHHHHHHHHHHHH
Q 030512 63 GPDDLVASILSKVNQSDGGVS----LAKEEHKEVAEVAQEL 99 (176)
Q Consensus 63 ~~~~Lk~~LL~aIagtdRG~~----aS~e~r~~V~~~i~qL 99 (176)
|.+++.+.|.+.+.+.++-+. +++++|+-|.++++..
T Consensus 1 ~~~~~~~~i~~Fv~s~~~~~~f~p~m~~~~R~~vH~lA~~~ 41 (62)
T d1msza_ 1 GVDHFRAMIVEFMASKKMQLEFPPSLNSHDRLRVHQIAEEH 41 (62)
T ss_dssp CCHHHHHHHHHHHHHTCSEEEECTTCCSHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHHHHHc
Confidence 467888888888888877663 4778999999988765
No 19
>d1wzaa1 b.71.1.1 (A:437-515) Bacterial alpha-Amylase {Halothermothrix orenii [TaxId: 31909]}
Probab=20.82 E-value=12 Score=24.91 Aligned_cols=21 Identities=29% Similarity=0.601 Sum_probs=17.9
Q ss_pred CCCCCCCCccceEEEEEecCC
Q 030512 105 EAPVKCPLIFGEWDVVYCSVP 125 (176)
Q Consensus 105 p~Pl~spLL~G~W~LlYTSs~ 125 (176)
.+|++-..-.|+|.|+|.|-.
T Consensus 32 nrpvkikvasgnwtllfnsgd 52 (79)
T d1wzaa1 32 NRPVKIKVASGNWTLLFNSGD 52 (79)
T ss_dssp SSCEEEEEESSCEEEEEESSS
T ss_pred CCcEEEEEecCcEEEEEccCC
Confidence 678888888999999998855
No 20
>d1r3na1 c.56.5.4 (A:18-247,A:364-455) Peptidase-like beta-alanine synthase, catalytic domain {Yeast (Saccharomyces kluyveri) [TaxId: 4934]}
Probab=20.73 E-value=70 Score=25.83 Aligned_cols=80 Identities=15% Similarity=0.143 Sum_probs=50.4
Q ss_pred CcccCChhHHHHHHHHhhc-----------cCCCCc---cCCHHHHHHHHHHHHHHhhhCC---CCCCCCCCccceEE--
Q 030512 58 PDLRTGPDDLVASILSKVN-----------QSDGGV---SLAKEEHKEVAEVAQELQKYCV---EAPVKCPLIFGEWD-- 118 (176)
Q Consensus 58 p~~~~~~~~Lk~~LL~aIa-----------gtdRG~---~aS~e~r~~V~~~i~qLE~~np---p~Pl~spLL~G~W~-- 118 (176)
..++-..+.|++.|++..+ .++.|+ ..|++++++-+-++.++|+.+- -+.. -=|+|.|.
T Consensus 9 ~~l~in~~RL~~~l~e~~~~~g~~~~~g~~~~~~G~tRla~S~~d~~ar~~l~~~~~~~Gl~v~~D~~--GNv~g~~~G~ 86 (322)
T d1r3na1 9 APLSIASGRLNQTILETGSQFGGVARWGQESHEFGMRRLAGTALDGAMRDWFTNECESLGCKVKVDKI--GNMFAVYPGK 86 (322)
T ss_dssp CCCCCCTTHHHHHHHHHHHHTTEECCCSSSTTCCEECCCTTSHHHHHHHHHHHHHHHHHTCEEEEBTT--SCEEEEECCS
T ss_pred CCCCcCHHHHHHHHHHHHHhhccccccCCCCCCCCeecccCCHHHHHHHHHHHHHHHHcCCEEEEeCC--CcEEEEecCC
Confidence 4466778999999887642 234564 4899999999999999998753 1111 12223321
Q ss_pred -----EEEecCCCC--CCCCccccccee
Q 030512 119 -----VVYCSVPTS--PGGGYRSAFGRL 139 (176)
Q Consensus 119 -----LlYTSs~~~--~GG~~Rs~lgR~ 139 (176)
++.-|=-.+ -||.|=..+|.+
T Consensus 87 ~~~~~v~~GSHlDTVp~GG~~DG~lGV~ 114 (322)
T d1r3na1 87 NGGKPTATGSHLDTQPEAGKYDGILGVL 114 (322)
T ss_dssp SCSSCEEEEECCCCCSSBCSSTTHHHHH
T ss_pred CCCCceEecCccccCCcCCCcCCccchH
Confidence 222222222 677888888875
No 21
>d2gu3a1 d.17.1.6 (A:99-161) Uncharacterized protein YpmB {Bacillus subtilis [TaxId: 1423]}
Probab=20.53 E-value=27 Score=22.29 Aligned_cols=49 Identities=12% Similarity=0.183 Sum_probs=29.5
Q ss_pred HHHhhh-CCCCCCCCC--Cccc--eEEEEEecCCCCCCCCcccccceeeeeecceEEEee
Q 030512 97 QELQKY-CVEAPVKCP--LIFG--EWDVVYCSVPTSPGGGYRSAFGRLFFKTKEMIQAVE 151 (176)
Q Consensus 97 ~qLE~~-npp~Pl~sp--LL~G--~W~LlYTSs~~~~GG~~Rs~lgR~lfk~~ei~Q~I~ 151 (176)
+.+.+- +|.+=++.. ..+| =|+|-|.+..+-.+ ..=.-|+.|+.++.|-
T Consensus 9 ~~v~~e~~~~ki~~v~LG~~~~~pvWEVtY~~~~~~l~------Y~~~~F~~G~~lk~It 62 (63)
T d2gu3a1 9 KIIKDEGLVSKQKEVHLAREGNVLLWEVTYLDKEGQYS------LSYVDFTTGKILKNIT 62 (63)
T ss_dssp HHHHHTTCCSEEEEEEEEEETTEEEEEEEEECTTSCEE------EEEEETTTCCEEEEEC
T ss_pred HHHHhhcCcceeeEEeeeeECCEEEEEEEEEeCCCCEE------EEEEEecCCcEEeecC
Confidence 334333 344444544 2333 29999999885444 2233688899988874
Done!