Query 030518
Match_columns 176
No_of_seqs 117 out of 282
Neff 3.4
Searched_HMMs 29240
Date Tue Mar 26 00:24:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030518.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030518hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1jvw_A Macrophage infectivity 99.3 1.9E-12 6.5E-17 102.7 5.4 48 126-174 30-78 (167)
2 1u79_A FKBP-type peptidyl-prol 99.3 2.7E-12 9.1E-17 96.1 5.9 47 126-173 5-51 (129)
3 3oe2_A Peptidyl-prolyl CIS-tra 99.3 4.5E-12 1.5E-16 105.4 7.3 46 126-172 110-155 (219)
4 1fd9_A Protein (macrophage inf 99.3 3.8E-12 1.3E-16 104.7 6.1 49 125-174 98-146 (213)
5 1q6h_A FKBP-type peptidyl-prol 99.2 1.7E-11 5.7E-16 101.7 6.9 48 126-174 114-161 (224)
6 2y78_A Peptidyl-prolyl CIS-tra 99.2 2.2E-11 7.5E-16 92.5 6.8 48 126-174 21-68 (133)
7 1yat_A FK506 binding protein; 99.2 2.4E-11 8.3E-16 88.2 5.8 45 129-174 2-47 (113)
8 3kz7_A FK506-binding protein 3 99.2 3E-11 1E-15 88.2 6.2 44 130-174 1-45 (119)
9 2lgo_A FKBP; infectious diseas 99.1 3.1E-11 1E-15 91.2 4.9 50 124-174 13-65 (130)
10 4dip_A Peptidyl-prolyl CIS-tra 99.1 6.7E-11 2.3E-15 87.4 6.3 48 126-173 5-54 (125)
11 3uf8_A Ubiquitin-like protein 99.1 7.8E-11 2.7E-15 95.9 6.5 46 128-174 99-144 (209)
12 2f4e_A ATFKBP42; FKBP-like, al 99.1 7.3E-11 2.5E-15 94.0 6.0 49 126-174 42-90 (180)
13 3o5q_A Peptidyl-prolyl CIS-tra 99.1 1.9E-10 6.6E-15 85.8 5.7 46 128-174 14-60 (128)
14 1r9h_A FKB-6, FK506 binding pr 99.0 2.3E-10 7.8E-15 86.5 5.9 43 130-173 11-54 (135)
15 2ppn_A FK506-binding protein 1 99.0 2E-10 6.9E-15 82.2 5.3 40 134-174 1-41 (107)
16 3b7x_A FK506-binding protein 6 99.0 1.3E-10 4.3E-15 87.8 4.0 46 128-174 21-67 (134)
17 3o5e_A Peptidyl-prolyl CIS-tra 99.0 3.4E-10 1.2E-14 86.6 6.2 44 130-174 32-76 (144)
18 2jwx_A FKBP38NTD, FK506-bindin 99.0 4.1E-10 1.4E-14 88.7 6.7 44 128-172 37-83 (157)
19 2if4_A ATFKBP42; FKBP-like, al 99.0 3.6E-10 1.2E-14 93.2 5.2 49 126-174 42-90 (338)
20 2vn1_A 70 kDa peptidylprolyl i 99.0 5.6E-10 1.9E-14 83.1 5.6 49 126-174 8-60 (129)
21 2awg_A 38 kDa FK-506 binding p 98.9 9.9E-10 3.4E-14 80.6 5.9 44 128-172 7-53 (118)
22 2d9f_A FK506-binding protein 8 98.9 1.4E-09 4.9E-14 82.1 6.7 46 126-172 9-57 (135)
23 1q1c_A FK506-binding protein 4 98.9 2.4E-09 8.3E-14 90.2 6.8 44 130-174 48-92 (280)
24 1kt0_A FKBP51, 51 kDa FK506-bi 98.8 1.5E-09 5.3E-14 93.1 3.0 44 130-174 28-72 (457)
25 1p5q_A FKBP52, FK506-binding p 98.7 1.2E-08 4.1E-13 83.9 6.1 43 128-172 20-63 (336)
26 3jxv_A 70 kDa peptidyl-prolyl 98.5 1.7E-07 5.8E-12 80.3 6.9 55 118-173 227-284 (356)
27 2lkn_A AH receptor-interacting 98.5 8.5E-08 2.9E-12 76.6 4.2 29 146-174 25-54 (165)
28 1q1c_A FK506-binding protein 4 98.3 1.4E-06 4.7E-11 73.4 7.0 40 131-172 166-206 (280)
29 3jxv_A 70 kDa peptidyl-prolyl 98.0 4.8E-06 1.6E-10 71.3 5.7 44 129-173 123-167 (356)
30 1kt0_A FKBP51, 51 kDa FK506-bi 98.0 9.8E-06 3.3E-10 69.5 6.9 40 131-172 144-184 (457)
31 1hxv_A Trigger factor; FKBP fo 97.5 4.8E-05 1.6E-09 56.3 2.9 27 145-173 27-53 (113)
32 1w26_A Trigger factor, TF; cha 94.9 0.014 4.6E-07 51.8 3.0 28 144-173 154-181 (432)
33 1t11_A Trigger factor, TF; hel 94.6 0.017 5.9E-07 50.6 3.0 27 145-173 158-184 (392)
34 2pbc_A FK506-binding protein 2 93.5 0.053 1.8E-06 37.9 3.1 19 145-163 3-21 (102)
35 3gty_X Trigger factor, TF; cha 82.6 0.88 3E-05 40.3 3.5 24 147-172 154-177 (433)
36 2eqm_A PHD finger protein 20-l 57.7 14 0.00048 26.3 4.3 42 111-162 17-58 (88)
37 3oa6_A MALE-specific lethal 3 53.7 3.4 0.00012 31.3 0.6 25 138-162 45-69 (110)
38 3sd4_A PHD finger protein 20; 37.4 38 0.0013 22.6 3.7 43 110-162 9-51 (69)
39 2qqr_A JMJC domain-containing 34.2 31 0.0011 26.3 3.1 23 145-173 62-84 (118)
40 3m9q_A Protein MALE-specific l 32.5 12 0.0004 27.9 0.5 25 138-162 45-69 (101)
41 2xdp_A Lysine-specific demethy 30.8 38 0.0013 26.0 3.1 23 145-173 63-85 (123)
42 3m9p_A MALE-specific lethal 3 21.7 24 0.00083 26.7 0.6 25 138-162 45-69 (110)
No 1
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=99.30 E-value=1.9e-12 Score=102.74 Aligned_cols=48 Identities=19% Similarity=0.258 Sum_probs=45.2
Q ss_pred CCcccCCCCceEEEeeeccCCC-CCCCCeEEEEEEEEeCCCCceeeeccc
Q 030518 126 ENYTKRDSGLIYRDFEVGKGDC-PKDGQQVFLLSSLEAISSCSCYDISIR 174 (176)
Q Consensus 126 ~g~~tt~SGL~YkDik~GtG~~-P~~GqtVtVHYtG~L~~dG~vFDSS~~ 174 (176)
+++++++|||+|+++++|+|+. |+.|+.|+|||+|++ .||++||||+.
T Consensus 30 ~~~~~~~sGl~~~vl~~G~G~~~~~~gd~V~v~Y~g~l-~dG~~fdss~~ 78 (167)
T 1jvw_A 30 PDAVKLPSGLVFQRIARGSGKRAPAIDDKCEVHYTGRL-RDGTVFDSSRE 78 (167)
T ss_dssp TTEEECTTSCEEEEEECCCCSBCCCTTCCEEEEEEEEC-TTSCEEEEHHH
T ss_pred CCcEECCCCEEEEEEEcCCCCcCCCCCCEEEEEEEEEE-CCCCEEeeccc
Confidence 5689999999999999999999 999999999999998 79999999963
No 2
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=99.30 E-value=2.7e-12 Score=96.11 Aligned_cols=47 Identities=23% Similarity=0.229 Sum_probs=44.9
Q ss_pred CCcccCCCCceEEEeeeccCCCCCCCCeEEEEEEEEeCCCCceeeecc
Q 030518 126 ENYTKRDSGLIYRDFEVGKGDCPKDGQQVFLLSSLEAISSCSCYDISI 173 (176)
Q Consensus 126 ~g~~tt~SGL~YkDik~GtG~~P~~GqtVtVHYtG~L~~dG~vFDSS~ 173 (176)
.+++++++||+|+++++|+|..|++|+.|+|||+|++ .||++||+|+
T Consensus 5 ~~~~~~~~Gl~~~~l~~G~G~~~~~gd~V~v~Y~g~~-~dG~~fdss~ 51 (129)
T 1u79_A 5 CEFSVSPSGLAFCDKVVGYGPEAVKGQLIKAHYVGKL-ENGKVFDSSY 51 (129)
T ss_dssp CCCEECTTSCEEEEEECCSSCBCCTTCEEEEEEEEEC-TTSCEEEEHH
T ss_pred CccEECCCCeEEEEEEcCCCCCCCCCCEEEEEEEEEE-CCCCEEEecC
Confidence 5689999999999999999999999999999999998 7999999996
No 3
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=99.29 E-value=4.5e-12 Score=105.36 Aligned_cols=46 Identities=15% Similarity=0.221 Sum_probs=44.4
Q ss_pred CCcccCCCCceEEEeeeccCCCCCCCCeEEEEEEEEeCCCCceeeec
Q 030518 126 ENYTKRDSGLIYRDFEVGKGDCPKDGQQVFLLSSLEAISSCSCYDIS 172 (176)
Q Consensus 126 ~g~~tt~SGL~YkDik~GtG~~P~~GqtVtVHYtG~L~~dG~vFDSS 172 (176)
+++++++|||+|+++++|+|+.|.+|++|+|||+|++ .||++||||
T Consensus 110 ~gv~~~~sGl~y~vl~~G~G~~p~~gd~V~V~Y~g~l-~dG~vfDss 155 (219)
T 3oe2_A 110 PGVKELADGILMTELTPGTGPKPDANGRVEVRYVGRL-PDGKIFDQS 155 (219)
T ss_dssp TTCEECGGGCEEEEEECCCSCCCCTTSEEEEEEEEEC-TTSCEEEEC
T ss_pred CCcEECCCCeEEEEEecCCCccCCCCCEEEEEEEEEE-CCCCEeecc
Confidence 6799999999999999999999999999999999998 799999998
No 4
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=99.27 E-value=3.8e-12 Score=104.74 Aligned_cols=49 Identities=18% Similarity=0.224 Sum_probs=45.9
Q ss_pred cCCcccCCCCceEEEeeeccCCCCCCCCeEEEEEEEEeCCCCceeeeccc
Q 030518 125 SENYTKRDSGLIYRDFEVGKGDCPKDGQQVFLLSSLEAISSCSCYDISIR 174 (176)
Q Consensus 125 ~~g~~tt~SGL~YkDik~GtG~~P~~GqtVtVHYtG~L~~dG~vFDSS~~ 174 (176)
.+++++++|||+|+++++|+|+.|++|+.|+|||+|++ .||++||||+.
T Consensus 98 ~~~v~~~~sGl~y~vl~~G~G~~p~~gD~V~V~Y~g~l-~dG~vfdss~~ 146 (213)
T 1fd9_A 98 KPGVVVLPSGLQYKVINSGNGVKPGKSDTVTVEYTGRL-IDGTVFDSTEK 146 (213)
T ss_dssp STTEEECTTSCEEEEEECCCSCCCCTTCEEEEEEEEEE-TTSCEEEEHHH
T ss_pred cCCcEECCCccEEEEEecCCCccCCCCCEEEEEEEEEE-CCCCEEeeccc
Confidence 36789999999999999999999999999999999998 79999999974
No 5
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=99.21 E-value=1.7e-11 Score=101.71 Aligned_cols=48 Identities=27% Similarity=0.416 Sum_probs=45.2
Q ss_pred CCcccCCCCceEEEeeeccCCCCCCCCeEEEEEEEEeCCCCceeeeccc
Q 030518 126 ENYTKRDSGLIYRDFEVGKGDCPKDGQQVFLLSSLEAISSCSCYDISIR 174 (176)
Q Consensus 126 ~g~~tt~SGL~YkDik~GtG~~P~~GqtVtVHYtG~L~~dG~vFDSS~~ 174 (176)
+++.+++|||+|+++++|+|+.|+.|+.|+|||+|++ .||++||||+.
T Consensus 114 ~~v~~~~sGl~y~vl~~G~G~~p~~gD~V~V~Y~g~l-~dG~vfdss~~ 161 (224)
T 1q6h_A 114 KGVKTSSTGLVYQVVEAGKGEAPKDSDTVVVNYKGTL-IDGKEFDNSYT 161 (224)
T ss_dssp TTEEECTTSCEEEEEECCSSCCCCTTCEEEEEEEEEE-TTSCEEEEGGG
T ss_pred CCeEECCCceEEEEEecccCccccCCCEEEEEEEEEe-CCCCEEeeccc
Confidence 5678899999999999999999999999999999998 79999999974
No 6
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=99.21 E-value=2.2e-11 Score=92.46 Aligned_cols=48 Identities=25% Similarity=0.286 Sum_probs=45.1
Q ss_pred CCcccCCCCceEEEeeeccCCCCCCCCeEEEEEEEEeCCCCceeeeccc
Q 030518 126 ENYTKRDSGLIYRDFEVGKGDCPKDGQQVFLLSSLEAISSCSCYDISIR 174 (176)
Q Consensus 126 ~g~~tt~SGL~YkDik~GtG~~P~~GqtVtVHYtG~L~~dG~vFDSS~~ 174 (176)
+++.++++||+|+++++|+|..|++|+.|+|||+|++ .||++||+|++
T Consensus 21 ~~~~~~~~gl~~~~l~~G~G~~~~~gd~V~v~Y~g~~-~dG~~fdss~~ 68 (133)
T 2y78_A 21 MTVVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWL-TDGQKFDSSKD 68 (133)
T ss_dssp TCCEECTTSCEEEEEECCSSCBCCTTSEEEEEEEEEE-TTSCEEEETTT
T ss_pred CCcEECCCCEEEEEEEcCCCCCCCCCCEEEEEEEEEE-CCCCEEeccCc
Confidence 4589999999999999999999999999999999998 89999999973
No 7
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=99.18 E-value=2.4e-11 Score=88.21 Aligned_cols=45 Identities=18% Similarity=0.240 Sum_probs=42.0
Q ss_pred ccCCCCceEEEeeeccCCC-CCCCCeEEEEEEEEeCCCCceeeeccc
Q 030518 129 TKRDSGLIYRDFEVGKGDC-PKDGQQVFLLSSLEAISSCSCYDISIR 174 (176)
Q Consensus 129 ~tt~SGL~YkDik~GtG~~-P~~GqtVtVHYtG~L~~dG~vFDSS~~ 174 (176)
.++++||+|+++++|+|+. |++|+.|+|||+|++ .||++||+|+.
T Consensus 2 ~~~~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~-~dG~~~d~s~~ 47 (113)
T 1yat_A 2 EVIEGNVKIDRISPGDGATFPKTGDLVTIHYTGTL-ENGQKFDSSVD 47 (113)
T ss_dssp EECGGGCEEEEEECCCSSCCCCTTCEEEEEEEEEE-TTSCEEEESTT
T ss_pred CCCCCCeEEEEEECCCCcccCCCCCEEEEEEEEEE-CCCCEEEecCC
Confidence 3578999999999999999 999999999999998 89999999974
No 8
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=99.18 E-value=3e-11 Score=88.21 Aligned_cols=44 Identities=16% Similarity=0.207 Sum_probs=40.5
Q ss_pred cCCCCceEEEeeeccCC-CCCCCCeEEEEEEEEeCCCCceeeeccc
Q 030518 130 KRDSGLIYRDFEVGKGD-CPKDGQQVFLLSSLEAISSCSCYDISIR 174 (176)
Q Consensus 130 tt~SGL~YkDik~GtG~-~P~~GqtVtVHYtG~L~~dG~vFDSS~~ 174 (176)
+.|+||+|+++++|+|. .|++|+.|+|||+|++ .||++||||+.
T Consensus 1 ~~p~g~~~~il~~G~g~~~p~~gd~V~v~Y~g~~-~dG~~fdss~~ 45 (119)
T 3kz7_A 1 EGPPKYTKSILKKGDKTNFPKKGDVVHCWYTGTL-PDGTVFDTNIQ 45 (119)
T ss_dssp CCSCSEEEEEEECCCSSCCCCTTCEEEEEEEEEC-TTSCEEEECCC
T ss_pred CCCCccEEEEEEcCCCCCcCCCCCEEEEEEEEEE-CCCCEEEeccc
Confidence 35899999999999996 4999999999999998 89999999974
No 9
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=99.14 E-value=3.1e-11 Score=91.18 Aligned_cols=50 Identities=14% Similarity=0.129 Sum_probs=46.0
Q ss_pred ecCCcccCCCCceEE--EeeeccCCC-CCCCCeEEEEEEEEeCCCCceeeeccc
Q 030518 124 TSENYTKRDSGLIYR--DFEVGKGDC-PKDGQQVFLLSSLEAISSCSCYDISIR 174 (176)
Q Consensus 124 ~~~g~~tt~SGL~Yk--Dik~GtG~~-P~~GqtVtVHYtG~L~~dG~vFDSS~~ 174 (176)
....+.+++|||+|+ ++++|+|+. |++|+.|+|||+|++ .||++||+|+.
T Consensus 13 ~~~~~~~~~~Gl~~~K~~l~~G~G~~~~~~gd~V~v~Y~g~~-~dG~~fdss~~ 65 (130)
T 2lgo_A 13 EAQTQGPGSMSAQLEKKVLTPGDGVTKPQAGKKVTVHYDGRF-PDGKQFDSSRS 65 (130)
T ss_dssp CCSSCSSSSSSCCCCEEEEECCCSSCCCCTTSEEEEEEEEEC-TTSCEEECTTT
T ss_pred ccccceeCCCceEEEEEEEeccCCCccCCCCCEEEEEEEEEE-CCCCEEEccCc
Confidence 335689999999999 999999999 999999999999998 89999999975
No 10
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=99.13 E-value=6.7e-11 Score=87.43 Aligned_cols=48 Identities=6% Similarity=-0.096 Sum_probs=44.0
Q ss_pred CCcccCCCCceEEEeeecc--CCCCCCCCeEEEEEEEEeCCCCceeeecc
Q 030518 126 ENYTKRDSGLIYRDFEVGK--GDCPKDGQQVFLLSSLEAISSCSCYDISI 173 (176)
Q Consensus 126 ~g~~tt~SGL~YkDik~Gt--G~~P~~GqtVtVHYtG~L~~dG~vFDSS~ 173 (176)
.+..++++||+|+++++|+ |..|++|+.|+|||+|+++.||++||||+
T Consensus 5 ~~~~~~~~gl~~~~l~~g~~~g~~~~~gd~V~v~Y~g~~~~dG~~fdss~ 54 (125)
T 4dip_A 5 MGALIPEPEVKIEVLQKPFICHRKTKGGDLMLVHYEGYLEKDGSLFHSTH 54 (125)
T ss_dssp CGGGCCCCCCEEEEEECCSCCSCCCCTTCEEEEEEEEEETTTCCEEEEHH
T ss_pred CceEECCCCeEEEEEEcCCCCCCcCCCCCEEEEEEEEEECCCCcEEEEcc
Confidence 4578899999999999999 89999999999999999933999999997
No 11
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=99.12 E-value=7.8e-11 Score=95.88 Aligned_cols=46 Identities=26% Similarity=0.310 Sum_probs=44.1
Q ss_pred cccCCCCceEEEeeeccCCCCCCCCeEEEEEEEEeCCCCceeeeccc
Q 030518 128 YTKRDSGLIYRDFEVGKGDCPKDGQQVFLLSSLEAISSCSCYDISIR 174 (176)
Q Consensus 128 ~~tt~SGL~YkDik~GtG~~P~~GqtVtVHYtG~L~~dG~vFDSS~~ 174 (176)
++++++||+|+++++|+|..|+.|+.|+|||+|++ .||++||||++
T Consensus 99 ~~~~~sGl~~~vl~~G~G~~~~~gd~V~v~Y~g~l-~dG~~fdss~~ 144 (209)
T 3uf8_A 99 VVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWL-TDGQKFDSSKD 144 (209)
T ss_dssp CEECTTSCEEEEEECCCSCBCCTTCEEEEEEEEEE-TTSCEEEESGG
T ss_pred ccCCCCceEEEEEEcCCCCcCCCCCEEEEEEEEEE-CCCCEEEEccc
Confidence 78899999999999999999999999999999999 89999999975
No 12
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=99.11 E-value=7.3e-11 Score=93.96 Aligned_cols=49 Identities=14% Similarity=0.087 Sum_probs=44.5
Q ss_pred CCcccCCCCceEEEeeeccCCCCCCCCeEEEEEEEEeCCCCceeeeccc
Q 030518 126 ENYTKRDSGLIYRDFEVGKGDCPKDGQQVFLLSSLEAISSCSCYDISIR 174 (176)
Q Consensus 126 ~g~~tt~SGL~YkDik~GtG~~P~~GqtVtVHYtG~L~~dG~vFDSS~~ 174 (176)
+++.++++||+|+++++|+|..|+.|+.|+|||+|++..||++||||+.
T Consensus 42 ~~~~~~~~gl~~~vl~~G~G~~~~~Gd~V~v~Y~g~l~~dG~~fdss~~ 90 (180)
T 2f4e_A 42 SEAEVLDEKVSKQIIKEGHGSKPSKYSTCFLHYRAWTKNSQHKFEDTWH 90 (180)
T ss_dssp SCCEEEETTEEEEEEECCBSCCBCTTCEEEEEEEEEETTTCCEEEETTT
T ss_pred CCcEECCCceEEEEEeCCCCCCCCCCCEEEEEEEEEECCCCcEEeccCc
Confidence 4578899999999999999999999999999999998336999999974
No 13
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=99.05 E-value=1.9e-10 Score=85.84 Aligned_cols=46 Identities=26% Similarity=0.365 Sum_probs=41.7
Q ss_pred cccCCCCceEEEeeeccCC-CCCCCCeEEEEEEEEeCCCCceeeeccc
Q 030518 128 YTKRDSGLIYRDFEVGKGD-CPKDGQQVFLLSSLEAISSCSCYDISIR 174 (176)
Q Consensus 128 ~~tt~SGL~YkDik~GtG~-~P~~GqtVtVHYtG~L~~dG~vFDSS~~ 174 (176)
..++++||+|+++++|+|. .|+.|+.|+|||+|++ .||++||||+.
T Consensus 14 ~~~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~-~dG~~fdss~~ 60 (128)
T 3o5q_A 14 TSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKL-SNGKKFDSSHD 60 (128)
T ss_dssp CSSCSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEE-TTSCEEEEHHH
T ss_pred cccCCCCEEEEEEECCCCCccCCCCCEEEEEEEEEE-CCCCEEEecCC
Confidence 3467899999999999998 6999999999999998 79999999963
No 14
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=99.04 E-value=2.3e-10 Score=86.51 Aligned_cols=43 Identities=23% Similarity=0.237 Sum_probs=40.4
Q ss_pred cCCCCceEEEeeeccCC-CCCCCCeEEEEEEEEeCCCCceeeecc
Q 030518 130 KRDSGLIYRDFEVGKGD-CPKDGQQVFLLSSLEAISSCSCYDISI 173 (176)
Q Consensus 130 tt~SGL~YkDik~GtG~-~P~~GqtVtVHYtG~L~~dG~vFDSS~ 173 (176)
++++||+|+++++|+|. .|+.|+.|+|||+|++ .||++||||+
T Consensus 11 ~~~~gl~~~~l~~G~g~~~~~~gd~V~v~Y~g~~-~dG~~fdss~ 54 (135)
T 1r9h_A 11 KKDGGVLKLIKKEGQGVVKPTTGTTVKVHYVGTL-ENGTKFDSSR 54 (135)
T ss_dssp TCCSSEEEEEEECCBSSCCCCTTCEEEEEEEEEE-TTSCEEEEHH
T ss_pred CCCCcEEEEEEEccCCCcCCCCCCEEEEEEEEEE-CCCCEEEecC
Confidence 47999999999999997 5999999999999998 8999999986
No 15
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=99.04 E-value=2e-10 Score=82.21 Aligned_cols=40 Identities=23% Similarity=0.280 Sum_probs=37.8
Q ss_pred CceEEEeeeccCCC-CCCCCeEEEEEEEEeCCCCceeeeccc
Q 030518 134 GLIYRDFEVGKGDC-PKDGQQVFLLSSLEAISSCSCYDISIR 174 (176)
Q Consensus 134 GL~YkDik~GtG~~-P~~GqtVtVHYtG~L~~dG~vFDSS~~ 174 (176)
||+|+++++|+|+. |+.|+.|+|||+|++ .||++||+|+.
T Consensus 1 Gl~~~~~~~G~g~~~~~~gd~V~v~y~~~~-~dG~~~d~s~~ 41 (107)
T 2ppn_A 1 GVQVETISPGDGRTFPKRGQTCVVHYTGML-EDGKKFDSSRD 41 (107)
T ss_dssp CEEEEEEECCCSSCCCCTTCEEEEEEEEEE-TTSCEEEEHHH
T ss_pred CcEEEEEECcCCCcCCCCCCEEEEEEEEEE-CCCCEEEecCC
Confidence 79999999999998 999999999999998 79999999963
No 16
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=99.03 E-value=1.3e-10 Score=87.82 Aligned_cols=46 Identities=17% Similarity=0.098 Sum_probs=41.3
Q ss_pred cccCCCCceEEEeeeccCCCCCCCCeEEEEEEEEeCC-CCceeeeccc
Q 030518 128 YTKRDSGLIYRDFEVGKGDCPKDGQQVFLLSSLEAIS-SCSCYDISIR 174 (176)
Q Consensus 128 ~~tt~SGL~YkDik~GtG~~P~~GqtVtVHYtG~L~~-dG~vFDSS~~ 174 (176)
.+++++||+|+++++|+|..+..|+.|+|||+|++ . ||++||+|+.
T Consensus 21 ~v~~~~gl~~~vl~~G~g~~~~~gd~V~v~Y~g~l-~~~G~~fdss~~ 67 (134)
T 3b7x_A 21 DISGDRGVLKDVIREGAGDLVAPDASVLVKYSGYL-EHMDRPFDSNYF 67 (134)
T ss_dssp ESSSSSSEEEEEEECCEEEECCTTCEEEEEEEEEC-TTCSSCSEEC--
T ss_pred eeeCCCCEEEEEEEcCCCCCCCCCCEEEEEEEEEE-CCCCeEEEecCC
Confidence 46689999999999999999999999999999998 6 6999999973
No 17
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=99.02 E-value=3.4e-10 Score=86.59 Aligned_cols=44 Identities=27% Similarity=0.385 Sum_probs=40.8
Q ss_pred cCCCCceEEEeeeccCC-CCCCCCeEEEEEEEEeCCCCceeeeccc
Q 030518 130 KRDSGLIYRDFEVGKGD-CPKDGQQVFLLSSLEAISSCSCYDISIR 174 (176)
Q Consensus 130 tt~SGL~YkDik~GtG~-~P~~GqtVtVHYtG~L~~dG~vFDSS~~ 174 (176)
+.++||+|+++++|+|. .|..|+.|+|||+|++ .||++||+|+.
T Consensus 32 ~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~-~dG~~fdss~~ 76 (144)
T 3o5e_A 32 KKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKL-SNGKKFDSSHD 76 (144)
T ss_dssp SCSSSEEEEEEECCBSSCCCCTTCEEEEEEEEEC-TTSCEEEESGG
T ss_pred cCCCeEEEEEEECCCCCccCCCCCEEEEEEEEEE-CCCCEEEeecc
Confidence 46899999999999998 6999999999999998 79999999974
No 18
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=99.02 E-value=4.1e-10 Score=88.66 Aligned_cols=44 Identities=16% Similarity=0.100 Sum_probs=40.9
Q ss_pred cccCCCCc-eEEEeeeccCC--CCCCCCeEEEEEEEEeCCCCceeeec
Q 030518 128 YTKRDSGL-IYRDFEVGKGD--CPKDGQQVFLLSSLEAISSCSCYDIS 172 (176)
Q Consensus 128 ~~tt~SGL-~YkDik~GtG~--~P~~GqtVtVHYtG~L~~dG~vFDSS 172 (176)
..+++||+ +|+++++|+|+ .|++|+.|+|||+|++ .||++|||+
T Consensus 37 ~~~~~sG~v~~~vl~~G~G~~~~p~~gd~V~v~Y~g~l-~dG~~fds~ 83 (157)
T 2jwx_A 37 LDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSL-ENGTRVQEE 83 (157)
T ss_dssp EESSSSSSEEEEEEECCSTTSCCCCTTEEEEEEEEEEC-TTSCEEEEE
T ss_pred ceECCCCCEEEEEEEccCCCccCCCCCCEEEEEEEEEE-CCCCEeecC
Confidence 44899998 79999999998 8999999999999998 899999985
No 19
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.98 E-value=3.6e-10 Score=93.23 Aligned_cols=49 Identities=14% Similarity=0.087 Sum_probs=43.5
Q ss_pred CCcccCCCCceEEEeeeccCCCCCCCCeEEEEEEEEeCCCCceeeeccc
Q 030518 126 ENYTKRDSGLIYRDFEVGKGDCPKDGQQVFLLSSLEAISSCSCYDISIR 174 (176)
Q Consensus 126 ~g~~tt~SGL~YkDik~GtG~~P~~GqtVtVHYtG~L~~dG~vFDSS~~ 174 (176)
.++.++++||+|+++++|+|..|..|++|+|||+|++..+|++||||+.
T Consensus 42 ~~~~~~~~~~~~~~~~~g~g~~~~~gd~v~v~y~g~~~~~g~~fd~~~~ 90 (338)
T 2if4_A 42 SEAEVLDEKVSKQIIKEGHGSKPSKYSTCFLHYRAWTKNSQHKFEDTWH 90 (338)
T ss_dssp SCCEEEETTEEEEEEECCBSCCCCTTCEEEEEEEEEETTTCCCCEEHHH
T ss_pred cCceeCCCCeEEEEEeCCCCCCCCCCCEEEEEEEEEEcCCCcEeecccC
Confidence 3467788999999999999999999999999999998435999999963
No 20
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=98.98 E-value=5.6e-10 Score=83.07 Aligned_cols=49 Identities=20% Similarity=0.262 Sum_probs=41.8
Q ss_pred CCcccCCCCceEE-Eeee---ccCCCCCCCCeEEEEEEEEeCCCCceeeeccc
Q 030518 126 ENYTKRDSGLIYR-DFEV---GKGDCPKDGQQVFLLSSLEAISSCSCYDISIR 174 (176)
Q Consensus 126 ~g~~tt~SGL~Yk-Dik~---GtG~~P~~GqtVtVHYtG~L~~dG~vFDSS~~ 174 (176)
++..+++||++|+ +++. |+|..|+.|+.|+|||+|+++.||++||+|+.
T Consensus 8 ~~~~~~~~g~~~~~il~~G~~g~g~~~~~gd~V~v~Y~g~~~~dG~~fd~s~~ 60 (129)
T 2vn1_A 8 EKVELTADGGVIKTILKKGDEGEENIPKKGNEVTVHYVGKLESTGKVFDSSFD 60 (129)
T ss_dssp EEEECSTTSSEEEEEEECCCCSGGGSCCTTCEEEEEEEEEETTTCCEEEEGGG
T ss_pred CCcEECCCCCEEEEEEeCCCCCCCCcCCCCCEEEEEEEEEECCCCeEEEecCC
Confidence 4577889999885 6785 46799999999999999997569999999973
No 21
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=98.95 E-value=9.9e-10 Score=80.60 Aligned_cols=44 Identities=16% Similarity=0.100 Sum_probs=40.4
Q ss_pred cccCCCC-ceEEEeeeccCC--CCCCCCeEEEEEEEEeCCCCceeeec
Q 030518 128 YTKRDSG-LIYRDFEVGKGD--CPKDGQQVFLLSSLEAISSCSCYDIS 172 (176)
Q Consensus 128 ~~tt~SG-L~YkDik~GtG~--~P~~GqtVtVHYtG~L~~dG~vFDSS 172 (176)
..+++|| |+|+++++|+|+ .|+.|+.|+|||+|++ .||++||++
T Consensus 7 ~~~~~~g~~~~~vl~~G~G~~~~~~~gd~V~v~y~g~~-~dG~~~ds~ 53 (118)
T 2awg_A 7 LDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSL-ENGTRVQEE 53 (118)
T ss_dssp EESSSSSSEEEEEEECCCTTCCCCCTTSEEEEEEEEEC-TTSCEEEEE
T ss_pred eEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEE-CCCCEEECC
Confidence 5567889 999999999998 7999999999999998 899999985
No 22
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.94 E-value=1.4e-09 Score=82.10 Aligned_cols=46 Identities=17% Similarity=0.096 Sum_probs=41.6
Q ss_pred CCcccCCCC-ceEEEeeeccCC--CCCCCCeEEEEEEEEeCCCCceeeec
Q 030518 126 ENYTKRDSG-LIYRDFEVGKGD--CPKDGQQVFLLSSLEAISSCSCYDIS 172 (176)
Q Consensus 126 ~g~~tt~SG-L~YkDik~GtG~--~P~~GqtVtVHYtG~L~~dG~vFDSS 172 (176)
+...+++|| |+|+++++|+|+ .|+.|+.|+|||+|++ .||++||++
T Consensus 9 ~~~~~~~~g~l~~~vl~~G~G~~~~~~~gd~V~v~Y~g~~-~dG~~fds~ 57 (135)
T 2d9f_A 9 EWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSL-ENGTRVQEE 57 (135)
T ss_dssp SCEESSSSSSSEEEEEECCCSSCCCCCTTSEEEEEEEEEE-SSSCEEEEE
T ss_pred cCcEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEE-CCCCEEecC
Confidence 346677889 999999999998 8999999999999998 899999984
No 23
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=98.88 E-value=2.4e-09 Score=90.18 Aligned_cols=44 Identities=25% Similarity=0.287 Sum_probs=41.3
Q ss_pred cCCCCceEEEeeeccCCC-CCCCCeEEEEEEEEeCCCCceeeeccc
Q 030518 130 KRDSGLIYRDFEVGKGDC-PKDGQQVFLLSSLEAISSCSCYDISIR 174 (176)
Q Consensus 130 tt~SGL~YkDik~GtG~~-P~~GqtVtVHYtG~L~~dG~vFDSS~~ 174 (176)
++++||+|+++++|+|.. |+.|+.|+|||+|++ .||++||||+.
T Consensus 48 ~~~~gl~~~vl~~G~G~~~~~~gd~V~v~Y~g~~-~dG~~fdss~~ 92 (280)
T 1q1c_A 48 KQDEGVLKVIKREGTGTEMPMIGDRVFVHYTGWL-LDGTKFDSSLD 92 (280)
T ss_dssp SCSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEE-TTSCEEEESTT
T ss_pred CCCCceEEEEEeCCCCCcCCCCCCEEEEEEEEEE-CCCCEEEeccc
Confidence 468999999999999998 999999999999998 89999999973
No 24
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=98.80 E-value=1.5e-09 Score=93.13 Aligned_cols=44 Identities=27% Similarity=0.366 Sum_probs=22.7
Q ss_pred cCCCCceEEEeeeccCCC-CCCCCeEEEEEEEEeCCCCceeeeccc
Q 030518 130 KRDSGLIYRDFEVGKGDC-PKDGQQVFLLSSLEAISSCSCYDISIR 174 (176)
Q Consensus 130 tt~SGL~YkDik~GtG~~-P~~GqtVtVHYtG~L~~dG~vFDSS~~ 174 (176)
++++||+|+++++|+|.. |+.|+.|+|||+|++ .||++||||+.
T Consensus 28 ~~~~g~~~~~~~~G~g~~~~~~gd~v~v~y~~~~-~~g~~~dss~~ 72 (457)
T 1kt0_A 28 KKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKL-SNGKKFDSSHD 72 (457)
T ss_dssp -----CEEEC--------CCCBTCEEEEEEEEEC------CBC---
T ss_pred CCCCcEEEEEEECCCCCCCCCCCCEEEEEEEEEE-CCCCEEeccCC
Confidence 478999999999999998 999999999999998 89999999964
No 25
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=98.73 E-value=1.2e-08 Score=83.87 Aligned_cols=43 Identities=23% Similarity=0.220 Sum_probs=39.0
Q ss_pred cccCCCCceEEEeeeccCC-CCCCCCeEEEEEEEEeCCCCceeeec
Q 030518 128 YTKRDSGLIYRDFEVGKGD-CPKDGQQVFLLSSLEAISSCSCYDIS 172 (176)
Q Consensus 128 ~~tt~SGL~YkDik~GtG~-~P~~GqtVtVHYtG~L~~dG~vFDSS 172 (176)
-++.++||++++++.|+|. .|..|++|+|||+|++ +|++||+|
T Consensus 20 ~~~~~~~~~~~~~~~g~g~~~p~~~~~v~v~y~g~~--~g~~fd~~ 63 (336)
T 1p5q_A 20 HMEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY--KDKLFDQR 63 (336)
T ss_dssp --CCTTSEEEEEEECCCCSCCCCTTCEEEEEEEEEE--TTEEEEEE
T ss_pred eecCCCcEEEEEEeCCCCCCCCCCCCeEEEEEEEEE--CCEEEecC
Confidence 5677999999999999998 6999999999999997 99999997
No 26
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=98.50 E-value=1.7e-07 Score=80.29 Aligned_cols=55 Identities=11% Similarity=0.183 Sum_probs=45.1
Q ss_pred ceeeEeecCC--cccCCCCceEEEeeeccC-CCCCCCCeEEEEEEEEeCCCCceeeecc
Q 030518 118 FEVKVVTSEN--YTKRDSGLIYRDFEVGKG-DCPKDGQQVFLLSSLEAISSCSCYDISI 173 (176)
Q Consensus 118 ~~vkvv~~~g--~~tt~SGL~YkDik~GtG-~~P~~GqtVtVHYtG~L~~dG~vFDSS~ 173 (176)
|+|+.+.-.. -++.++|++|+++++|+| ..|+.|+.|+|||+|++ .||++||+|.
T Consensus 227 ~~vel~~~~~v~dv~~d~~~~~~i~~~g~g~~~~~~gd~V~v~y~g~l-~dG~~fd~~~ 284 (356)
T 3jxv_A 227 IDLELVSWKTVTEIGDDKKILKKVLKEXEGYERPNEGAVVTVKITGKL-QDGTVFLKKG 284 (356)
T ss_dssp EEEEEEEEECEEEESTTCCEEEEEEECCBSSCCCCTTCEEEEEEEEEE-SSSCEEEEES
T ss_pred EEEEEEEEecccccccccceeEEeeecccccCCCCCCCEEEEEEEEEE-CCCCEEeecc
Confidence 5555554221 244678999999999999 78999999999999999 8999999983
No 27
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=98.48 E-value=8.5e-08 Score=76.64 Aligned_cols=29 Identities=14% Similarity=-0.042 Sum_probs=24.2
Q ss_pred CCCCCCCeEEEEEEEEeC-CCCceeeeccc
Q 030518 146 DCPKDGQQVFLLSSLEAI-SSCSCYDISIR 174 (176)
Q Consensus 146 ~~P~~GqtVtVHYtG~L~-~dG~vFDSS~~ 174 (176)
+.+++|++|+|||+|||+ .||++||||++
T Consensus 25 p~~~~G~~V~vhY~g~l~d~~G~~FDsS~~ 54 (165)
T 2lkn_A 25 PDFQDGTKATFHYRTLHSDDEGTVLDDSRA 54 (165)
T ss_dssp CCCCTTCEEEEECEEECSSSSCCEEEESTT
T ss_pred CCCCCCCEEEEEEEEEEeCCCccEEEeccc
Confidence 345789999999999984 25999999975
No 28
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=98.28 E-value=1.4e-06 Score=73.38 Aligned_cols=40 Identities=25% Similarity=0.250 Sum_probs=37.2
Q ss_pred CCCCceEEEeeeccCC-CCCCCCeEEEEEEEEeCCCCceeeec
Q 030518 131 RDSGLIYRDFEVGKGD-CPKDGQQVFLLSSLEAISSCSCYDIS 172 (176)
Q Consensus 131 t~SGL~YkDik~GtG~-~P~~GqtVtVHYtG~L~~dG~vFDSS 172 (176)
.++||+|+++++|+|. .|++|+.|+|||+|++ ||++||++
T Consensus 166 ~d~gl~~~il~~G~G~~~~~~gd~V~i~y~g~~--dG~~fd~~ 206 (280)
T 1q1c_A 166 EDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY--KDKLFDQR 206 (280)
T ss_dssp CSSSEEEEEEECCSCSCCCCTTCEEEEEEEEEE--TTEEEEEE
T ss_pred cccceeEEeeecccccccccCCceEEEEEEEEe--CCEEEecC
Confidence 6789999999999999 5999999999999987 99999984
No 29
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=98.05 E-value=4.8e-06 Score=71.32 Aligned_cols=44 Identities=20% Similarity=0.320 Sum_probs=39.5
Q ss_pred ccCCCCceEEEeeeccC-CCCCCCCeEEEEEEEEeCCCCceeeecc
Q 030518 129 TKRDSGLIYRDFEVGKG-DCPKDGQQVFLLSSLEAISSCSCYDISI 173 (176)
Q Consensus 129 ~tt~SGL~YkDik~GtG-~~P~~GqtVtVHYtG~L~~dG~vFDSS~ 173 (176)
+..+.++..+.+++|.| ..|..|+.|+|||+|+| .||++||+|.
T Consensus 123 i~~D~~~~k~i~~~G~g~~~p~~g~~V~v~y~g~l-~dgt~~~~~~ 167 (356)
T 3jxv_A 123 IAKDGGIFKKILKEGDKWENPKDPDEVFVKYEARL-EDGTVVSKSE 167 (356)
T ss_dssp TTSSSSEEEEEEECCBSSCCCCTTCEEEEEEEEEE-TTSCEEEEEE
T ss_pred cccCceeEEEEEecCcccCCCCCCCEEEEEEEEEE-CCCCEEeccC
Confidence 34578899999999999 56999999999999999 8999999984
No 30
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=98.00 E-value=9.8e-06 Score=69.53 Aligned_cols=40 Identities=25% Similarity=0.379 Sum_probs=35.7
Q ss_pred CCCCceEEEeeeccCC-CCCCCCeEEEEEEEEeCCCCceeeec
Q 030518 131 RDSGLIYRDFEVGKGD-CPKDGQQVFLLSSLEAISSCSCYDIS 172 (176)
Q Consensus 131 t~SGL~YkDik~GtG~-~P~~GqtVtVHYtG~L~~dG~vFDSS 172 (176)
.+.++..++++.|.|. .|..|++|+|||+||+ +|++||++
T Consensus 144 ~dg~~~k~i~~~g~~~~~p~~g~~V~v~y~g~~--~g~~f~~~ 184 (457)
T 1kt0_A 144 EDGGIIRRTKRKGEGYSNPNEGATVEIHLEGRC--GGRMFDCR 184 (457)
T ss_dssp SSSSEEEEEEECCBCSCCCCTTCEEEEEEEEEE--TTEEEEEE
T ss_pred CCcceEEEEEecCCCCCCCCCCCEEEEEEEEEe--CCeEEecC
Confidence 4567899999999995 5999999999999998 99999985
No 31
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=97.51 E-value=4.8e-05 Score=56.33 Aligned_cols=27 Identities=4% Similarity=-0.149 Sum_probs=23.5
Q ss_pred CCCCCCCCeEEEEEEEEeCCCCceeeecc
Q 030518 145 GDCPKDGQQVFLLSSLEAISSCSCYDISI 173 (176)
Q Consensus 145 G~~P~~GqtVtVHYtG~L~~dG~vFDSS~ 173 (176)
+..+++|+.|+|||+|++ ||++||||.
T Consensus 27 ~~~~~~gD~V~v~Y~g~~--dG~~fdss~ 53 (113)
T 1hxv_A 27 DKKLANGDIAIIDFTGIV--DNKKLASAS 53 (113)
T ss_dssp --CCCSSEEEEEEEEEEE--TTEECSTTC
T ss_pred CCCCCCCCEEEEEEEEEE--CCEEcccCC
Confidence 557999999999999997 999999985
No 32
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=94.88 E-value=0.014 Score=51.84 Aligned_cols=28 Identities=7% Similarity=-0.039 Sum_probs=24.7
Q ss_pred cCCCCCCCCeEEEEEEEEeCCCCceeeecc
Q 030518 144 KGDCPKDGQQVFLLSSLEAISSCSCYDISI 173 (176)
Q Consensus 144 tG~~P~~GqtVtVHYtG~L~~dG~vFDSS~ 173 (176)
.+..++.|+.|++||+|+. ||+.||+|+
T Consensus 154 ~~~~~~~gD~V~i~y~g~~--dG~~fd~~~ 181 (432)
T 1w26_A 154 KDGAVEAEDRVTIDFTGSV--DGEEFEGGK 181 (432)
T ss_dssp CSSCCCTTCEEEECEEEES--SSCBCSSCC
T ss_pred cCCCCCCCCEEEEEEEEee--CCeEccCCC
Confidence 4567999999999999984 999999986
No 33
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=94.65 E-value=0.017 Score=50.62 Aligned_cols=27 Identities=7% Similarity=0.043 Sum_probs=23.5
Q ss_pred CCCCCCCCeEEEEEEEEeCCCCceeeecc
Q 030518 145 GDCPKDGQQVFLLSSLEAISSCSCYDISI 173 (176)
Q Consensus 145 G~~P~~GqtVtVHYtG~L~~dG~vFDSS~ 173 (176)
+..++.|+.|++||+|+. ||+.||+|.
T Consensus 158 ~~~~~~gD~V~i~y~g~~--dG~~fd~~~ 184 (392)
T 1t11_A 158 DEAAENGKRVSIDFVGSI--DGVEFEGGK 184 (392)
T ss_dssp SCCCCTTCEEEEEEEEES--SSSCCTTCE
T ss_pred CCCCCCCCEEEEEEEEEE--CCEEccCCC
Confidence 345899999999999984 999999983
No 34
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=93.50 E-value=0.053 Score=37.92 Aligned_cols=19 Identities=5% Similarity=-0.059 Sum_probs=16.9
Q ss_pred CCCCCCCCeEEEEEEEEeC
Q 030518 145 GDCPKDGQQVFLLSSLEAI 163 (176)
Q Consensus 145 G~~P~~GqtVtVHYtG~L~ 163 (176)
|..|++|+.|+|||+|++.
T Consensus 3 g~~~~~gd~V~v~y~~~~~ 21 (102)
T 2pbc_A 3 PIKSRKGDVLHMHYTGKLE 21 (102)
T ss_dssp CCCCCTTCEEEEEEEEECT
T ss_pred CCcCCCCCEEEEEEEEEEC
Confidence 6679999999999999863
No 35
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=82.58 E-value=0.88 Score=40.30 Aligned_cols=24 Identities=13% Similarity=-0.107 Sum_probs=21.2
Q ss_pred CCCCCCeEEEEEEEEeCCCCceeeec
Q 030518 147 CPKDGQQVFLLSSLEAISSCSCYDIS 172 (176)
Q Consensus 147 ~P~~GqtVtVHYtG~L~~dG~vFDSS 172 (176)
.++.|+.|++||+|+ .||..||++
T Consensus 154 ~a~~gD~V~id~~~~--~dG~~~~~~ 177 (433)
T 3gty_X 154 PAEAGDLVRVNMEVY--NEEGKKLTS 177 (433)
T ss_dssp CCCTTSEEEEEEEEE--CTTSCEEEE
T ss_pred ccCCCCEEEEEEEEE--ECCEECcCC
Confidence 478999999999997 499999975
No 36
>2eqm_A PHD finger protein 20-like 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2jtf_A
Probab=57.65 E-value=14 Score=26.35 Aligned_cols=42 Identities=5% Similarity=-0.122 Sum_probs=26.3
Q ss_pred cccccccceeeEeecCCcccCCCCceEEEeeeccCCCCCCCCeEEEEEEEEe
Q 030518 111 PNFIREGFEVKVVTSENYTKRDSGLIYRDFEVGKGDCPKDGQQVFLLSSLEA 162 (176)
Q Consensus 111 p~fireg~~vkvv~~~g~~tt~SGL~YkDik~GtG~~P~~GqtVtVHYtG~L 162 (176)
|+-.+.|-.|+.+...+. -+.-+.+++. ..|+.|.|||.||-
T Consensus 17 ~~~F~vGmkLEA~D~~~~-----~~~a~i~~v~-----~~~~~v~VHfdGW~ 58 (88)
T 2eqm_A 17 GITFEIGARLEALDYLQK-----WYPSRIEKID-----YEEGKMLVHFERWS 58 (88)
T ss_dssp SCCCCSSCEEEEECTTSC-----EEEEEEEEEE-----TTTTEEEEEESSST
T ss_pred cCcCCCCCEEEEEcCCCC-----eeEEEEEEEe-----ccCCEEEEEECCCC
Confidence 455677878877763321 1344444433 24669999999985
No 37
>3oa6_A MALE-specific lethal 3 homolog; chromodomain, MSL3, histone H4 tail, DNA backbone recognitio methyllysine recognition, H4K20ME1; HET: DNA MLZ; 2.35A {Homo sapiens} PDB: 3ob9_A*
Probab=53.72 E-value=3.4 Score=31.34 Aligned_cols=25 Identities=16% Similarity=0.040 Sum_probs=17.4
Q ss_pred EEeeeccCCCCCCCCeEEEEEEEEe
Q 030518 138 RDFEVGKGDCPKDGQQVFLLSSLEA 162 (176)
Q Consensus 138 kDik~GtG~~P~~GqtVtVHYtG~L 162 (176)
.+++++.+.....+-.-.|||.||.
T Consensus 45 l~v~~~~~~~~~~~~~Y~VHY~GWn 69 (110)
T 3oa6_A 45 VDVIVGKDEKGRKIPEYLIHFNGWN 69 (110)
T ss_dssp EEEEEEECTTCCEEEEEEEEETTSC
T ss_pred EEEEeccCCcCCcccEEEEEECCcC
Confidence 3455566655555557899999986
No 38
>3sd4_A PHD finger protein 20; tudor domain, transcription; 1.93A {Homo sapiens} PDB: 3q1j_A
Probab=37.38 E-value=38 Score=22.60 Aligned_cols=43 Identities=5% Similarity=-0.150 Sum_probs=26.1
Q ss_pred CcccccccceeeEeecCCcccCCCCceEEEeeeccCCCCCCCCeEEEEEEEEe
Q 030518 110 FPNFIREGFEVKVVTSENYTKRDSGLIYRDFEVGKGDCPKDGQQVFLLSSLEA 162 (176)
Q Consensus 110 fp~fireg~~vkvv~~~g~~tt~SGL~YkDik~GtG~~P~~GqtVtVHYtG~L 162 (176)
-++-.+.|-.++.+...+.. ..-.++++- ..|+.+.|||.||-
T Consensus 9 ~~~~F~vGmkLEa~d~~~p~-----~~AtV~~v~-----~~~~~~~VhfdGw~ 51 (69)
T 3sd4_A 9 RGISFEVGAQLEARDRLKNW-----YPAHIEDID-----YEEGKVLIHFKRWN 51 (69)
T ss_dssp TTCCCSTTCEEEEECTTSCE-----EEEEEEEEE-----TTTTEEEEEETTSC
T ss_pred CCCCcCCCCEEEEEECCCCc-----cccEEEEEe-----ccCCEEEEEeCCCC
Confidence 35667888889888643321 112222221 13569999999974
No 39
>2qqr_A JMJC domain-containing histone demethylation protein 3A; histone lysine demethylase, tandem hybrid tudor domains, metal binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 b.34.9.1 PDB: 2qqs_A* 2gfa_A* 2gf7_A*
Probab=34.18 E-value=31 Score=26.28 Aligned_cols=23 Identities=22% Similarity=0.430 Sum_probs=16.9
Q ss_pred CCCCCCCCeEEEEEEEEeCCCCceeeecc
Q 030518 145 GDCPKDGQQVFLLSSLEAISSCSCYDISI 173 (176)
Q Consensus 145 G~~P~~GqtVtVHYtG~L~~dG~vFDSS~ 173 (176)
|+ |..|..|.|. |.||++||..+
T Consensus 62 Gp-P~~G~~V~V~-----W~DG~~y~a~f 84 (118)
T 2qqr_A 62 GP-PAEGEVVQVR-----WTDGQVYGAKF 84 (118)
T ss_dssp CC-CCTTCEEEEE-----CTTSCEEEEEE
T ss_pred CC-CCCCCEEEEE-----cCCCCEeeeEE
Confidence 55 8888888886 35777777654
No 40
>3m9q_A Protein MALE-specific lethal-3; chromodomain, MSL3, methyllysine recognition, aromatic CAGE, complex, transcription upregulation; 1.29A {Drosophila melanogaster} SCOP: b.34.13.0
Probab=32.49 E-value=12 Score=27.91 Aligned_cols=25 Identities=0% Similarity=-0.354 Sum_probs=15.2
Q ss_pred EEeeeccCCCCCCCCeEEEEEEEEe
Q 030518 138 RDFEVGKGDCPKDGQQVFLLSSLEA 162 (176)
Q Consensus 138 kDik~GtG~~P~~GqtVtVHYtG~L 162 (176)
.+++..++........-.|||.||.
T Consensus 45 l~v~~~~~~~~~~~~~Y~VHY~GWn 69 (101)
T 3m9q_A 45 LNVFERRNEHGLRFYEYKIHFQGWR 69 (101)
T ss_dssp EEEEEEECTTSCEEEEEEEEETTSC
T ss_pred EEEEecCCccccCceEEEEEeCCCC
Confidence 3445544432333457889999986
No 41
>2xdp_A Lysine-specific demethylase 4C; oxidoreductase, histone modification; 1.56A {Homo sapiens}
Probab=30.75 E-value=38 Score=25.96 Aligned_cols=23 Identities=22% Similarity=0.346 Sum_probs=17.1
Q ss_pred CCCCCCCCeEEEEEEEEeCCCCceeeecc
Q 030518 145 GDCPKDGQQVFLLSSLEAISSCSCYDISI 173 (176)
Q Consensus 145 G~~P~~GqtVtVHYtG~L~~dG~vFDSS~ 173 (176)
|+ |..|..|.|.| .||+++|..+
T Consensus 63 Gp-P~~G~~V~V~W-----~DG~~y~a~f 85 (123)
T 2xdp_A 63 GP-PAEGEVVQVKW-----PDGKLYGAKY 85 (123)
T ss_dssp CC-CCTTCEEEEEC-----TTSCEEEEEE
T ss_pred CC-CCCCCEEEEEc-----CCCCEEeEEE
Confidence 66 99999999963 5777776654
No 42
>3m9p_A MALE-specific lethal 3 homolog; chromodomain, MSL3, histone H4 tail, DNA backbone recognitio methyllysine recognition, H4K20ME1; HET: DNA MLZ; 2.35A {Homo sapiens} PDB: 3oa6_A* 3ob9_A*
Probab=21.70 E-value=24 Score=26.66 Aligned_cols=25 Identities=16% Similarity=0.040 Sum_probs=15.2
Q ss_pred EEeeeccCCCCCCCCeEEEEEEEEe
Q 030518 138 RDFEVGKGDCPKDGQQVFLLSSLEA 162 (176)
Q Consensus 138 kDik~GtG~~P~~GqtVtVHYtG~L 162 (176)
.+++..+|..-..+..-.|||.||.
T Consensus 45 l~v~~~~~~~g~~~~~Y~VHY~GWn 69 (110)
T 3m9p_A 45 VDVIVGKDEKGRKIPEYLIHFNGWN 69 (110)
T ss_dssp EEEEEEECTTCCEEEEEEEEETTSC
T ss_pred EEEEeccCcccccceEEEEEECCCC
Confidence 4455544432223457889999986
Done!