BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030535
(175 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZT66|E134_MAIZE Endo-1,3;1,4-beta-D-glucanase OS=Zea mays PE=1 SV=1
Length = 303
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 95/165 (57%), Gaps = 11/165 (6%)
Query: 4 SQCFENPPKLS-PGSGCGAG--TVQQL-GGLNTYVTGSGPPDSKSAILLISDVFGYEAPL 59
SQC +NPP S G V L GGL YV+G+ S A++L SDVFGYEAPL
Sbjct: 27 SQCLDNPPDRSIHGRQLAEAGEVVHDLPGGLRAYVSGAA--SSSRAVVLASDVFGYEAPL 84
Query: 60 FRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALK 119
R++ DKVA AG+ VV PDF GD + D N W + H+ K DAK + AALK
Sbjct: 85 LRQIVDKVAKAGYFVVVPDFLKGDYLDDKKN----FTEWLEAHSPVKAAEDAKPLFAALK 140
Query: 120 SKGVSAIGAAGFCWGGVVAAKLASSHDIQAAVVLHPGAITVDDIN 164
+G S + G+CWGG ++ ++ + D++A + HP ++T DD+
Sbjct: 141 KEGKS-VAVGGYCWGGKLSVEVGKTSDVKAVCLSHPYSVTADDMK 184
>sp|Q8R1G2|CMBL_MOUSE Carboxymethylenebutenolidase homolog OS=Mus musculus GN=Cmbl PE=2
SV=1
Length = 245
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 73/137 (53%), Gaps = 3/137 (2%)
Query: 20 GAGTVQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79
G G Q+ + YVT S P D+ A++++ D+FG++ P R +AD +A G+ + PDF
Sbjct: 20 GMGHEVQVEHIKAYVTRS-PVDAGKAVIVVQDIFGWQLPNTRYMADMIARNGYTTIVPDF 78
Query: 80 FYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK-GVSAIGAAGFCWGGVVA 138
F G D AW K N K + +V+ L+ + IG GFCWGGVV
Sbjct: 79 FVGQEPWDPAGDWSTFPAWLKSRNARKVNREVDAVLRYLRQQCHAQKIGIVGFCWGGVVV 138
Query: 139 AKLASSH-DIQAAVVLH 154
++ +++ DI+A V ++
Sbjct: 139 HQVMTAYPDIRAGVSVY 155
>sp|Q7TP52|CMBL_RAT Carboxymethylenebutenolidase homolog OS=Rattus norvegicus GN=Cmbl
PE=2 SV=1
Length = 245
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 71/137 (51%), Gaps = 3/137 (2%)
Query: 20 GAGTVQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79
G G Q+ + YVT S P D+ A++++ D+FG++ R +AD +AG G+ + PDF
Sbjct: 20 GMGQEVQVEHIKAYVTRS-PVDAGKAVIVVQDIFGWQLSNTRYMADMIAGNGYTTIVPDF 78
Query: 80 FYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK-GVSAIGAAGFCWGGVVA 138
F G D W K N K + +V+ LK + IG GFCWGG+V
Sbjct: 79 FVGQEPWDPAGDWSTFPEWLKSRNARKINREVDAVLRYLKQQCHAQKIGIVGFCWGGIVV 138
Query: 139 AKLASSH-DIQAAVVLH 154
+ +++ +++A V ++
Sbjct: 139 HHVMTTYPEVRAGVSVY 155
>sp|Q5RBU3|CMBL_PONAB Carboxymethylenebutenolidase homolog OS=Pongo abelii GN=CMBL PE=2
SV=1
Length = 245
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 2/127 (1%)
Query: 20 GAGTVQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79
G G Q+ + YVT S P D+ A+++I D+FG++ P R +AD ++G G+ + PDF
Sbjct: 20 GLGREVQVEHIKAYVTKS-PVDAGKAVIVIQDIFGWQLPNTRYMADMISGNGYTTIVPDF 78
Query: 80 FYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK-GVSAIGAAGFCWGGVVA 138
F G D + W K N K + +++ LK + IG GFCWGG+
Sbjct: 79 FVGQEPWDPSGDWSIFPEWLKTRNAQKIDREISAILKYLKQQCHAQKIGIVGFCWGGIAV 138
Query: 139 AKLASSH 145
L +
Sbjct: 139 HHLMMKY 145
>sp|Q96DG6|CMBL_HUMAN Carboxymethylenebutenolidase homolog OS=Homo sapiens GN=CMBL PE=1
SV=1
Length = 245
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 2/127 (1%)
Query: 20 GAGTVQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79
G G Q+ + YVT S P D+ A+++I D+FG++ P R +AD ++G G+ + PDF
Sbjct: 20 GLGREVQVEHIKAYVTKS-PVDAGKAVIVIQDIFGWQLPNTRYIADMISGNGYTTIVPDF 78
Query: 80 FYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK-GVSAIGAAGFCWGGVVA 138
F G D + W K N K + +++ LK + IG GFCWGG
Sbjct: 79 FVGQEPWDPSGDWSIFPEWLKTRNAQKIDREISAILKYLKQQCHAQKIGIVGFCWGGTAV 138
Query: 139 AKLASSH 145
L +
Sbjct: 139 HHLMMKY 145
>sp|P39721|AIM2_YEAST Protein AIM2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=AIM2 PE=1 SV=1
Length = 246
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 82/171 (47%), Gaps = 20/171 (11%)
Query: 3 GSQCFENPPKLSPGSGCGAGTVQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRK 62
G CFE G G +++ GL+TY GS P K I++++DV+G +
Sbjct: 7 GKCCFEGVCH----DGTPKGRREEIFGLDTYAAGSTSPKEK-VIVILTDVYGNKFNNVLL 61
Query: 63 LADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTD--KGYVDAKSVIAALKS 120
ADK A AG++V PD +GD I ++ DR+AW + H+ + K VD + L+
Sbjct: 62 TADKFASAGYMVFVPDILFGDAIS--SDKPIDRDAWFQRHSPEVTKKIVDGFMKLLKLEY 119
Query: 121 KGVSAIGAAGFCWGGVVAAKLASSHD------IQAAVVLHPGAITVDDING 165
IG G+C+G AK A H AA + HP +++++I
Sbjct: 120 DP-KFIGVVGYCFG----AKFAVQHISGDGGLANAAAIAHPSFVSIEEIEA 165
>sp|Q6P7K0|CMBL_XENTR Carboxymethylenebutenolidase homolog OS=Xenopus tropicalis GN=cmbl
PE=2 SV=1
Length = 246
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 2/123 (1%)
Query: 20 GAGTVQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79
G Q+ + YV+ K A++++ D+FG++ P R +AD + G++ + PDF
Sbjct: 20 AKGQEVQIEHIKAYVSKPHSSTDK-AVIVVQDIFGWQLPNTRFMADLLTAHGYITICPDF 78
Query: 80 FYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK-GVSAIGAAGFCWGGVVA 138
F G +N + W + K + V+ LK + V IG GFCWGGVV
Sbjct: 79 FVGQEPWKPSNDRSTFTEWLQTRQATKVEKEINVVLKYLKEQCHVKKIGVIGFCWGGVVT 138
Query: 139 AKL 141
L
Sbjct: 139 HHL 141
>sp|Q5XH09|CMBL_XENLA Carboxymethylenebutenolidase homolog OS=Xenopus laevis GN=cmbl PE=2
SV=1
Length = 246
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 3/139 (2%)
Query: 26 QLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPI 85
Q+ + YV+ K A++++ D+FG++ P R +AD + G++ + PDFF G
Sbjct: 26 QIEHIKAYVSKPHSSTDK-AVIVVQDIFGWQLPNTRFMADLLTAHGYITICPDFFVGQES 84
Query: 86 VDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK-GVSAIGAAGFCWGGVVAAKLASS 144
+N W + K + V+ LK + V IG GFCWGGVV L
Sbjct: 85 WKPSNDWSTFTEWLQTRQATKVEKEMNVVLKYLKEQCHVKKIGVIGFCWGGVVTHHLMLK 144
Query: 145 H-DIQAAVVLHPGAITVDD 162
+ +++A V + V+D
Sbjct: 145 YPELKAGVSFYGIIRDVED 163
>sp|O14359|YB4E_SCHPO Uncharacterized AIM2 family protein C30D10.14
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC30D10.14 PE=3 SV=1
Length = 249
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 62/142 (43%), Gaps = 14/142 (9%)
Query: 24 VQQLGGLNTYVTGSGPPDSKSAILL-ISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYG 82
++ GGL TYV GS S + +L+ D+FG + ++ ADK+A GF V PDF G
Sbjct: 25 IENFGGLTTYVVGST---SNTRVLIGFMDIFGLSDQI-KEGADKLADDGFTVYLPDFLEG 80
Query: 83 DPIVDLNNPQFDREAWRKIHNTDKGYVD--------AKSVIAALKSKGVS-AIGAAGFCW 133
P+ P E + ++ + AK V A + G + IG GFCW
Sbjct: 81 KPLPVTALPPKTPEDQKLCNDFFSTRISPNLHWPKLAKVVEAVRANHGPNVTIGTYGFCW 140
Query: 134 GGVVAAKLASSHDIQAAVVLHP 155
G V ++ D HP
Sbjct: 141 GAKVLVTYPATIDFVGIASCHP 162
>sp|O67988|CLCD_RHOOP Carboxymethylenebutenolidase OS=Rhodococcus opacus GN=clcD PE=3
SV=1
Length = 252
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 50/116 (43%), Gaps = 3/116 (2%)
Query: 33 YVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQ 92
Y+ S S I+L++D+FG P +R LA +A G VV PD F+ + +P
Sbjct: 30 YLHASSDTGSGDTIVLLTDIFGV-TPFYRHLAAMLAEKGHDVVIPDVFHR--VGHATDPG 86
Query: 93 FDREAWRKIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSHDIQ 148
D R+ D+ ++ A G GFC GG A A++H Q
Sbjct: 87 RDAALARRRQLDDRLAIEDIERTVAHTVDDQQTFGVLGFCLGGSFALLTAAAHPNQ 142
>sp|O67802|DLHH_AQUAE Putative carboxymethylenebutenolidase OS=Aquifex aeolicus (strain
VF5) GN=aq_1997 PE=3 SV=1
Length = 231
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 12/108 (11%)
Query: 45 AILLISDVFGYEAPL--FRKLADKVAGAGFLVVAPDFFYG------DPIVDLNNPQFDRE 96
A+L+ + +G E+PL +++ DK+A GF+ APDF+ G D L F+
Sbjct: 27 AVLVFHEWWGLESPLSNIKEICDKLADEGFVAFAPDFYKGQYADNPDDAGKLMTEMFE-- 84
Query: 97 AWRKIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASS 144
+++ D+ + + + + +G GFC GG +A A+
Sbjct: 85 --KRMDEVDRIFQASVEFVKECRYTYPKKVGITGFCCGGTLAMYFAAK 130
>sp|Q54MZ9|CMBL_DICDI Carboxymethylenebutenolidase homolog OS=Dictyostelium discoideum
GN=cmbl PE=3 SV=1
Length = 255
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 24/159 (15%)
Query: 29 GLNTYVTGSGPPDSKSA---ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFY--GD 83
GL S P DS+ ++ + D FG L+ ++ADK+A G+ VV P+F+Y G
Sbjct: 13 GLKCDAYVSRPKDSQKELKPVIFVMDAFGLRDWLY-EMADKIAEEGYFVVQPNFYYRIGK 71
Query: 84 PIV----DLNNPQFDREAWRKIH------NTDKGYVDAKSVIAAL-KSKGV----SAIGA 128
I+ L + E +I N ++ D + + K +GV +
Sbjct: 72 NIITNLEKLKSADTKDEVICQIRTQMAKINREETVSDVSEMFDFIDKQEGVRKSKEGVAI 131
Query: 129 AGFCWGGVVAAK--LASSHDIQAAVVLHPGAITV-DDIN 164
G+C+GG VA + +A ++ H G + + DD N
Sbjct: 132 VGYCFGGGVAMRSAIAFPDIVKVVASFHAGRLAIPDDEN 170
>sp|Q9P7U1|YI7F_SCHPO Uncharacterized AIM2 family protein C977.15 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC977.15 PE=3 SV=1
Length = 247
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 13/144 (9%)
Query: 24 VQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGD 83
++ +GG+ TY TG SK ++ DVFG + ++ AD++A + PDF G+
Sbjct: 24 LKDIGGMQTYFTGKR--SSKVVLIGFMDVFGLSKQI-KEGADQLANHELAIYLPDFLNGE 80
Query: 84 PI-VDLNNPQF--DREAWRKIHNTDKGYVDAKSV------IAALKSKGVSAIGAAGFCWG 134
+++ +P+ +EA K + + I + + V IGA GFCWG
Sbjct: 81 TASIEMIDPKTIEQKEARSKFMEKISSPLHWPKLTKVIEDIERIHGQDVK-IGAYGFCWG 139
Query: 135 GVVAAKLASSHDIQAAVVLHPGAI 158
V + HP +
Sbjct: 140 AKVLITYPNKERFLRIGCAHPSLL 163
>sp|P46209|USF_AQUPY Protein usf OS=Aquifex pyrophilus GN=usf PE=4 SV=1
Length = 231
Score = 38.1 bits (87), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Query: 46 ILLISDVFGYEAPL--FRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHN 103
+++I + +G E+PL +++ D+ A GF+ APDF+ G +NP + +
Sbjct: 28 VIVIHEWWGLESPLSNIKEICDRFAQEGFVAFAPDFYEGKY---ADNPDDAGKLMTDMFE 84
Query: 104 TDKGYVDA--KSVIAALKSKGVSA---IGAAGFCWGGVVAAKLA 142
VDA K+ + LK ++ +G GFC GG ++ A
Sbjct: 85 NRMDKVDAIFKASVDFLKECRYTSPKKVGVTGFCCGGTLSMYFA 128
>sp|P27136|TFDE1_CUPPJ Carboxymethylenebutenolidase 1 OS=Cupriavidus pinatubonensis
(strain JMP134 / LMG 1197) GN=tfdEI PE=3 SV=1
Length = 234
Score = 37.0 bits (84), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 8/131 (6%)
Query: 20 GAGTVQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79
G + GG G DS +++ ++FG P R+ + + GAGF V PD
Sbjct: 5 GVEITSRSGGRFGAYLGKPTTDSAPIVVIAQEIFGI-TPFIRETVEWLVGAGFGCVCPDL 63
Query: 80 FYGD-PIVDLN-NPQFDRE---AWRKIHNTDKGYVDAKSVIAALKSKGVS--AIGAAGFC 132
++ P ++L+ N +RE A + + + G D I ++ S + G+C
Sbjct: 64 YWRQAPNIELDANVPSEREQALALFRDFDMEAGVNDLSCAIEYARALPFSNGRVAVVGYC 123
Query: 133 WGGVVAAKLAS 143
GG +A +A+
Sbjct: 124 LGGALAFDVAA 134
>sp|P71505|DLHH_METEA Putative carboxymethylenebutenolidase OS=Methylobacterium
extorquens (strain ATCC 14718 / DSM 1338 / AM1)
GN=MexAM1_META1p1735 PE=3 SV=2
Length = 291
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 7/97 (7%)
Query: 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF--YGDPIVDLNNPQFDREAWRKIHN 103
IL++ ++FG + + + ++A G+ +AP+ + GD N Q E K+ +
Sbjct: 81 ILVVQEIFGVHEHI-KDVCRRLAKLGYFALAPELYARQGDVSTLTNIQQIVSEVVSKVPD 139
Query: 104 TDKGYVDAKSVIAALKSKG---VSAIGAAGFCWGGVV 137
+ D + +A K G + +G GFCWGG +
Sbjct: 140 A-QVMSDLDAAVAFAKGTGKADTARLGITGFCWGGRI 175
>sp|Q8X8L4|DLHH_ECO57 Putative carboxymethylenebutenolidase OS=Escherichia coli O157:H7
GN=ysgA PE=3 SV=1
Length = 271
Score = 35.4 bits (80), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 55/119 (46%), Gaps = 4/119 (3%)
Query: 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFY--GDPIVDLNNPQFDREAWRKIHN 103
++++ ++FG + R + ++A G+L +AP+ ++ GDP + P K+ +
Sbjct: 59 VIVVQEIFGVHEHI-RDICRRLALEGYLAIAPELYFREGDPNDFADIPTLLSGLVAKVPD 117
Query: 104 TD-KGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSHDIQAAVVLHPGAITVD 161
+ +D + A+ V + GFCWGG + A+ + A V G +T D
Sbjct: 118 SQVLADLDHVASWASRNGGDVHRLMITGFCWGGRITWLYAAHNPQLKAAVAWYGKLTGD 176
>sp|P56262|DLHH_ECOLI Putative carboxymethylenebutenolidase OS=Escherichia coli (strain
K12) GN=ysgA PE=3 SV=3
Length = 271
Score = 35.4 bits (80), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 55/119 (46%), Gaps = 4/119 (3%)
Query: 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFY--GDPIVDLNNPQFDREAWRKIHN 103
++++ ++FG + R + ++A G+L +AP+ ++ GDP + P K+ +
Sbjct: 59 VIVVQEIFGVHEHI-RDICRRLALEGYLAIAPELYFREGDPNDFADIPTLLSGLVAKVPD 117
Query: 104 TD-KGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSHDIQAAVVLHPGAITVD 161
+ +D + A+ V + GFCWGG + A+ + A V G +T D
Sbjct: 118 SQVLADLDHVASWASRNGGDVHRLMITGFCWGGRITWLYAAHNPQLKAAVAWYGKLTGD 176
>sp|Q8ZAL4|DLHH_YERPE Putative carboxymethylenebutenolidase OS=Yersinia pestis GN=YPO3787
PE=3 SV=1
Length = 267
Score = 35.0 bits (79), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 63/141 (44%), Gaps = 13/141 (9%)
Query: 16 GSGCGAGTVQQLGG-LNTYVTGSGPPDSKS----AILLISDVFGYEAPLFRKLADKVAGA 70
G CG T+ G L Y+ PD + ++++ ++FG + + + ++A
Sbjct: 17 GIHCGETTIPSQGDELPAYI---AKPDQHTGPYPVVIVVQEIFGVHEHI-QDICRRLAKQ 72
Query: 71 GFLVVAPDFFY--GDPIVDLNNPQFDREAWRKIHNTDKGY-VDAKSVIAALKSKGVSAIG 127
G+L +AP+ ++ GD N + +K+ + +D + A+ +
Sbjct: 73 GYLAIAPELYFRQGDAKDYSNINELVNNLVKKVPDRQVLVDLDHTAHWASRHGGDTKKLA 132
Query: 128 AAGFCWGGVVAAKLASSHDIQ 148
GFCWGG +A L ++H+ Q
Sbjct: 133 ITGFCWGGRIAW-LYAAHNPQ 152
>sp|Q6D5Z2|NAPA_ERWCT Periplasmic nitrate reductase OS=Erwinia carotovora subsp.
atroseptica (strain SCRI 1043 / ATCC BAA-672) GN=napA
PE=3 SV=1
Length = 828
Score = 34.7 bits (78), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 10/75 (13%)
Query: 77 PDFFYGD-----PIVDLNNPQFDREAWRKIHNTDKGY-VDAKSVIAALKSKGVSAIGAAG 130
P YG P++ + N QFD+E + DK + + A+ ALK KG +AIG G
Sbjct: 88 PKIMYGQDRLTQPLLRMRNGQFDKEGEFTPISWDKAFDIMAEKFKTALKEKGPNAIGMFG 147
Query: 131 ----FCWGGVVAAKL 141
W G +AKL
Sbjct: 148 SGQSTIWEGYASAKL 162
>sp|Q80950|VE1_HPV61 Replication protein E1 OS=Human papillomavirus type 61 GN=E1 PE=3
SV=1
Length = 652
Score = 33.5 bits (75), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQ---FDREAWRKIH 102
+++ +++ E P F+ L ++ FL P GDP+ LNN F R +W +I
Sbjct: 561 LMITTNINPLEDPTFKYLHSRIVVFQFLHKCPLNSNGDPVYTLNNENWKSFFRRSWARIE 620
>sp|Q43914|DLHH_AZOBR Putative carboxymethylenebutenolidase OS=Azospirillum brasilense
PE=3 SV=1
Length = 231
Score = 33.5 bits (75), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 11/75 (14%)
Query: 28 GGLNTYVT---GSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFY--- 81
G + YV G GP +++I ++FG + R L D A G+L V PD F+
Sbjct: 12 GSFSAYVAKPAGGGP---APGLVVIQEIFGVNQ-VMRDLCDAFAAQGWLAVCPDLFWRQE 67
Query: 82 -GDPIVDLNNPQFDR 95
G I D +++R
Sbjct: 68 PGVQITDKTQEEWNR 82
>sp|P65700|PGK_MYCTU Phosphoglycerate kinase OS=Mycobacterium tuberculosis GN=pgk PE=3
SV=1
Length = 412
Score = 33.1 bits (74), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 8/125 (6%)
Query: 40 PDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWR 99
PD ++ ++ G + +LA V GA L A GD I+ L N +FD+
Sbjct: 71 PDPTLSLAPVAVALGEQLGRHVQLAGDVVGADALARAEGLTGGD-ILLLENIRFDKRETS 129
Query: 100 KIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSHDIQAAVVLHPGAIT 159
K N D AK ++ + + GV + GF GVV K AS +DI + + G +
Sbjct: 130 K--NDDDRRALAKQLVELVGTGGVFV--SDGF---GVVHRKQASVYDIATLLPHYAGTLV 182
Query: 160 VDDIN 164
D++
Sbjct: 183 ADEMR 187
>sp|A5U2D9|PGK_MYCTA Phosphoglycerate kinase OS=Mycobacterium tuberculosis (strain ATCC
25177 / H37Ra) GN=pgk PE=3 SV=1
Length = 412
Score = 33.1 bits (74), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 8/125 (6%)
Query: 40 PDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWR 99
PD ++ ++ G + +LA V GA L A GD I+ L N +FD+
Sbjct: 71 PDPTLSLAPVAVALGEQLGRHVQLAGDVVGADALARAEGLTGGD-ILLLENIRFDKRETS 129
Query: 100 KIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSHDIQAAVVLHPGAIT 159
K N D AK ++ + + GV + GF GVV K AS +DI + + G +
Sbjct: 130 K--NDDDRRALAKQLVELVGTGGVFV--SDGF---GVVHRKQASVYDIATLLPHYAGTLV 182
Query: 160 VDDIN 164
D++
Sbjct: 183 ADEMR 187
>sp|C1AN82|PGK_MYCBT Phosphoglycerate kinase OS=Mycobacterium bovis (strain BCG / Tokyo
172 / ATCC 35737 / TMC 1019) GN=pgk PE=3 SV=1
Length = 412
Score = 33.1 bits (74), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 8/125 (6%)
Query: 40 PDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWR 99
PD ++ ++ G + +LA V GA L A GD I+ L N +FD+
Sbjct: 71 PDPTLSLAPVAVALGEQLGRHVQLAGDVVGADALARAEGLTGGD-ILLLENIRFDKRETS 129
Query: 100 KIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSHDIQAAVVLHPGAIT 159
K N D AK ++ + + GV + GF GVV K AS +DI + + G +
Sbjct: 130 K--NDDDRRALAKQLVELVGTGGVFV--SDGF---GVVHRKQASVYDIATLLPHYAGTLV 182
Query: 160 VDDIN 164
D++
Sbjct: 183 ADEMR 187
>sp|A1KIM6|PGK_MYCBP Phosphoglycerate kinase OS=Mycobacterium bovis (strain BCG /
Pasteur 1173P2) GN=pgk PE=3 SV=1
Length = 412
Score = 33.1 bits (74), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 8/125 (6%)
Query: 40 PDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWR 99
PD ++ ++ G + +LA V GA L A GD I+ L N +FD+
Sbjct: 71 PDPTLSLAPVAVALGEQLGRHVQLAGDVVGADALARAEGLTGGD-ILLLENIRFDKRETS 129
Query: 100 KIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSHDIQAAVVLHPGAIT 159
K N D AK ++ + + GV + GF GVV K AS +DI + + G +
Sbjct: 130 K--NDDDRRALAKQLVELVGTGGVFV--SDGF---GVVHRKQASVYDIATLLPHYAGTLV 182
Query: 160 VDDIN 164
D++
Sbjct: 183 ADEMR 187
>sp|P65701|PGK_MYCBO Phosphoglycerate kinase OS=Mycobacterium bovis (strain ATCC BAA-935
/ AF2122/97) GN=pgk PE=3 SV=1
Length = 412
Score = 33.1 bits (74), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 8/125 (6%)
Query: 40 PDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWR 99
PD ++ ++ G + +LA V GA L A GD I+ L N +FD+
Sbjct: 71 PDPTLSLAPVAVALGEQLGRHVQLAGDVVGADALARAEGLTGGD-ILLLENIRFDKRETS 129
Query: 100 KIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSHDIQAAVVLHPGAIT 159
K N D AK ++ + + GV + GF GVV K AS +DI + + G +
Sbjct: 130 K--NDDDRRALAKQLVELVGTGGVFV--SDGF---GVVHRKQASVYDIATLLPHYAGTLV 182
Query: 160 VDDIN 164
D++
Sbjct: 183 ADEMR 187
>sp|Q9L6M9|DLHH_SALTY Putative carboxymethylenebutenolidase OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=ysgA PE=3 SV=1
Length = 270
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFY--GDPIVDLNNPQFDREAWRKIHN 103
++++ ++FG + R + ++A G+L +AP+ ++ GDP + P K+ +
Sbjct: 59 VIVVQEIFGVHEHI-RDICRRLALEGYLAIAPELYFREGDPNDFADIPTLLSGLVAKVPD 117
Query: 104 TD-KGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSHDIQ 148
+ +D + A+ + GFCWGG + L ++H+ Q
Sbjct: 118 SQVLADLDHVASWASRNGGDAHRLMITGFCWGGRI-TWLYAAHNPQ 162
>sp|Q8Z3B8|DLHH_SALTI Putative carboxymethylenebutenolidase OS=Salmonella typhi GN=ysgA
PE=3 SV=1
Length = 270
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFY--GDPIVDLNNPQFDREAWRKIHN 103
++++ ++FG + R + ++A G+L +AP+ ++ GDP + P K+ +
Sbjct: 59 VIVVQEIFGVHEHI-RDICRRLALEGYLAIAPELYFREGDPNDFADIPTLLSGLVAKVPD 117
Query: 104 TD-KGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSHDIQ 148
+ +D + A+ + GFCWGG + L ++H+ Q
Sbjct: 118 SQVLADLDHVASWASRNGGDAHRLMITGFCWGGRI-TWLYAAHNPQ 162
>sp|C6DK59|NAPA_PECCP Periplasmic nitrate reductase OS=Pectobacterium carotovorum subsp.
carotovorum (strain PC1) GN=napA PE=3 SV=1
Length = 828
Score = 32.0 bits (71), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 10/75 (13%)
Query: 77 PDFFYGD-----PIVDLNNPQFDREAWRKIHNTDKGY-VDAKSVIAALKSKGVSAIGAAG 130
P YG P++ + + +FD+E + DK + + A+ ALK KG +AIG G
Sbjct: 88 PKIMYGQDRLTQPLLRMRDGKFDKEGEFTPISWDKAFDIMAEKFKTALKEKGPNAIGMFG 147
Query: 131 ----FCWGGVVAAKL 141
W G AAKL
Sbjct: 148 SGQSTIWEGYAAAKL 162
>sp|Q07505|DLHH_YEAST Putative carboxymethylenebutenolidase OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YDL086W PE=1 SV=1
Length = 273
Score = 32.0 bits (71), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 52/133 (39%), Gaps = 15/133 (11%)
Query: 37 SGPPDSK-SAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF----------YGDPI 85
+G P +K ++L S+++ P+ R+ ++A G++VVAP + Y
Sbjct: 28 AGYPQAKFPGVILYSEIYQVTGPV-RRFGQRIASEGYVVVAPAIYHNFMGPEALPYDVQG 86
Query: 86 VDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSH 145
D+ N ++ +K D + K IG+ G C GG +A +
Sbjct: 87 TDIGNEYKIKKPLESYDEDNKLCCDLLFQLPQFDGK---RIGSTGMCLGGHLAFRALLDK 143
Query: 146 DIQAAVVLHPGAI 158
+ A P I
Sbjct: 144 RVTCATCFFPTDI 156
>sp|P95862|DLHH_SULSO Putative carboxymethylenebutenolidase OS=Sulfolobus solfataricus
(strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
GN=SSO2087 PE=3 SV=1
Length = 257
Score = 31.6 bits (70), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/151 (19%), Positives = 66/151 (43%), Gaps = 36/151 (23%)
Query: 39 PPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQF---- 93
P + K A+++I +++G + + ++ ++A G++ +AP + + +++ N Q
Sbjct: 21 PENPKLAVIVIHEIWGLNDNI-KDISRRLANEGYMALAPQLYTRNEDVLNEGNIQNVMMK 79
Query: 94 ----------DREAWRKI-------------------HNTDKGYV-DAKSVIAALKSKGV 123
D ++++I T++ + DA + S+GV
Sbjct: 80 VWSIPPEKRNDPNSYQQIMSALDEKGKKVAELLVLNRQKTEEQMIKDAIKAYEYVSSQGV 139
Query: 124 SAIGAAGFCWGGVVAAKLASSHDIQAAVVLH 154
I + GFC GG +A +LA+ + +V +
Sbjct: 140 KKIVSMGFCMGGGLAFQLATEVPLDGTIVFY 170
>sp|P73163|DLHH_SYNY3 Putative carboxymethylenebutenolidase OS=Synechocystis sp. (strain
PCC 6803 / Kazusa) GN=sll1298 PE=3 SV=1
Length = 246
Score = 31.6 bits (70), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 20/122 (16%)
Query: 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDR-------EAW 98
+++I ++FG + + R + ++VA G++ +AP I P F+ EA
Sbjct: 35 VIVIQEIFGVNSHI-RDVTERVAKEGYVAIAP------AIYQRQAPGFEEGYTPEGIEAG 87
Query: 99 RKIHNTDKG---YVDAKSVIA---ALKSKGVSAIGAAGFCWGGVVAAKLASSHDIQAAVV 152
RK+ + D ++ IA L + +G GFC+GG + AS ++A
Sbjct: 88 RKLKDQTSSAEILSDLEATIAYAQTLPNVKPEEVGLIGFCFGGWIVYLGASLPTVKATAS 147
Query: 153 LH 154
+
Sbjct: 148 FY 149
>sp|Q9AMS7|BIOB_BRAJA Biotin synthase OS=Bradyrhizobium japonicum (strain USDA 110)
GN=bioB PE=3 SV=1
Length = 331
Score = 31.2 bits (69), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 63 LADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREA 97
+ D++ FL A F GD ++ NNP+ DR+A
Sbjct: 284 MTDELQALCFLAGANSIFVGDVLLTTNNPKVDRDA 318
>sp|Q2Y9Y9|BIOB_NITMU Biotin synthase OS=Nitrosospira multiformis (strain ATCC 25196 /
NCIMB 11849) GN=bioB PE=3 SV=1
Length = 342
Score = 30.8 bits (68), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 61 RKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDRE 96
R++ D V FL A FYGD ++ NP+ +R+
Sbjct: 295 REMPDAVQALCFLAGANSIFYGDKLLTTGNPEAERD 330
>sp|B2HP85|PGK_MYCMM Phosphoglycerate kinase OS=Mycobacterium marinum (strain ATCC
BAA-535 / M) GN=pgk PE=3 SV=1
Length = 416
Score = 30.4 bits (67), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 8/125 (6%)
Query: 40 PDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWR 99
PD K ++ ++ G + +LA + G L A GD ++ L N +FD+ R
Sbjct: 71 PDPKLSLEPVAAALGEQLGRHVQLAGDIVGTDALARAEGLTDGDVLL-LENIRFDK---R 126
Query: 100 KIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSHDIQAAVVLHPGAIT 159
+ D + +A L S G A + GF GVV K AS +D+ + + G +
Sbjct: 127 ETSKDDGERLALAKQLAELVSPG-GAFVSDGF---GVVHRKQASVYDVATLLPHYAGRLV 182
Query: 160 VDDIN 164
D+I
Sbjct: 183 ADEIR 187
>sp|Q21KW2|QUEA_SACD2 S-adenosylmethionine:tRNA ribosyltransferase-isomerase
OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 /
DSM 17024) GN=queA PE=3 SV=1
Length = 350
Score = 30.4 bits (67), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 20/85 (23%)
Query: 84 PIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLAS 143
P +D + D+E ++ ++ T KG V A + AG + V+ AKL
Sbjct: 149 PYIDREDEADDKERYQTVYGTQKGAVAAPT---------------AGLHFDDVLLAKLKD 193
Query: 144 SHDIQAAVVLHPGA-----ITVDDI 163
QA V LH GA + VD+I
Sbjct: 194 KGVQQAFVTLHVGAGTFQPVRVDNI 218
>sp|P94136|TFDE2_CUPPJ Carboxymethylenebutenolidase 2 OS=Cupriavidus pinatubonensis
(strain JMP134 / LMG 1197) GN=tfdEII PE=3 SV=1
Length = 235
Score = 30.4 bits (67), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 12/113 (10%)
Query: 46 ILLISDVFGYEAPLFRKLADKVA--GAG-FLVVAPDFFYGDPIVDLNNPQFDREAWRKIH 102
+L++ D++G A +R A +A GAG L+V P +G+ F R+
Sbjct: 37 LLVLPDIYGCNA-FYRGYAAYLAEQGAGEVLLVDPFAAFGELATVTREAAF----QRRHR 91
Query: 103 NTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSHDIQAAVVLHP 155
D+ YV+ +I + + + G GFC GG+ +LA + V +P
Sbjct: 92 LADRAYVE--ELIDFIDGQRIE--GVVGFCLGGLFVFELARQQVVSRLVAYYP 140
>sp|P0A115|CLCD_PSESB Carboxymethylenebutenolidase OS=Pseudomonas sp. (strain B13)
GN=clcD PE=1 SV=1
Length = 236
Score = 30.4 bits (67), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 50/114 (43%), Gaps = 10/114 (8%)
Query: 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREA------WR 99
I++ ++FG A R+ + G+ V PD + +PQ +R+ W+
Sbjct: 31 IVIAQEIFGVNA-FMRETVSWLVDQGYAAVCPDLYARQAPGTALDPQDERQREQAYKLWQ 89
Query: 100 KIHNTDKGYVDAKSVIAALKSKGVS--AIGAAGFCWGGVVAAKLASSHDIQAAV 151
+ + G D ++ I + + S +G G+C GG +A +A+ + AV
Sbjct: 90 AF-DMEAGVGDLEAAIRYARHQPYSNGKVGLVGYCLGGALAFLVAAKGYVDRAV 142
>sp|P0A114|CLCD_PSEPU Carboxymethylenebutenolidase OS=Pseudomonas putida GN=clcD PE=1
SV=1
Length = 236
Score = 30.4 bits (67), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 50/114 (43%), Gaps = 10/114 (8%)
Query: 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREA------WR 99
I++ ++FG A R+ + G+ V PD + +PQ +R+ W+
Sbjct: 31 IVIAQEIFGVNA-FMRETVSWLVDQGYAAVCPDLYARQAPGTALDPQDERQREQAYKLWQ 89
Query: 100 KIHNTDKGYVDAKSVIAALKSKGVS--AIGAAGFCWGGVVAAKLASSHDIQAAV 151
+ + G D ++ I + + S +G G+C GG +A +A+ + AV
Sbjct: 90 AF-DMEAGVGDLEAAIRYARHQPYSNGKVGLVGYCLGGALAFLVAAKGYVDRAV 142
>sp|A4J5V5|DAPA_DESRM 4-hydroxy-tetrahydrodipicolinate synthase OS=Desulfotomaculum
reducens (strain MI-1) GN=dapA PE=3 SV=1
Length = 296
Score = 30.4 bits (67), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 14/61 (22%)
Query: 24 VQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGD 83
V+++GG T + G+G D+ S+I+L K A+KV G ++VAP +Y
Sbjct: 68 VEEVGGQATVIAGTGSYDTASSIIL------------TKEAEKVGCDGVMLVAP--YYNK 113
Query: 84 P 84
P
Sbjct: 114 P 114
>sp|A8LX93|SYL_SALAI Leucine--tRNA ligase OS=Salinispora arenicola (strain CNS-205)
GN=leuS PE=3 SV=1
Length = 952
Score = 30.0 bits (66), Expect = 7.2, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 59 LFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAAL 118
+F D + GA +LV+AP+ D +V P R+AW + + V +AA
Sbjct: 322 VFTTRPDTIFGATYLVLAPEHALVDDLVPTAWPSGTRDAWTGGQASPRAAVAGYRKVAAA 381
Query: 119 KS 120
K+
Sbjct: 382 KT 383
>sp|B5Y8Y0|APT_COPPD Adenine phosphoribosyltransferase OS=Coprothermobacter
proteolyticus (strain ATCC 35245 / DSM 5265 / BT) GN=apt
PE=3 SV=1
Length = 175
Score = 30.0 bits (66), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 115 IAALKSKGVSAIGAAGFCWGGVVAAKLASSHDIQAAVVLHPGAITVDDINGKFE 168
+++L V+A+ A GF WGG +A +L + + PG + + + +FE
Sbjct: 47 VSSLNVTAVAAVEARGFIWGGTLAYRLG----VGFIPIRKPGKLPFEVVEKEFE 96
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.136 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,305,548
Number of Sequences: 539616
Number of extensions: 2969218
Number of successful extensions: 7594
Number of sequences better than 100.0: 46
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 7561
Number of HSP's gapped (non-prelim): 46
length of query: 175
length of database: 191,569,459
effective HSP length: 110
effective length of query: 65
effective length of database: 132,211,699
effective search space: 8593760435
effective search space used: 8593760435
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)