Query 030535
Match_columns 175
No_of_seqs 106 out of 1037
Neff 9.0
Searched_HMMs 46136
Date Fri Mar 29 15:12:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030535.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/030535hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3043 Predicted hydrolase re 99.9 2.7E-23 5.9E-28 154.6 13.5 166 2-172 2-169 (242)
2 COG0412 Dienelactone hydrolase 99.8 9.7E-20 2.1E-24 140.1 14.7 142 28-170 12-161 (236)
3 PF01738 DLH: Dienelactone hyd 99.8 2.3E-20 4.9E-25 141.7 10.3 139 30-171 1-149 (218)
4 PRK13604 luxD acyl transferase 99.7 2.2E-17 4.7E-22 130.5 12.8 118 30-159 22-143 (307)
5 TIGR03101 hydr2_PEP hydrolase, 99.7 2.8E-16 6E-21 122.8 14.2 122 28-160 10-137 (266)
6 PRK00870 haloalkane dehalogena 99.7 1E-15 2.2E-20 121.3 15.7 122 21-157 20-150 (302)
7 PLN02298 hydrolase, alpha/beta 99.7 1.3E-15 2.7E-20 122.3 15.1 127 22-158 35-170 (330)
8 COG2267 PldB Lysophospholipase 99.7 1.6E-15 3.5E-20 120.4 14.1 131 19-160 9-145 (298)
9 PHA02857 monoglyceride lipase; 99.7 1.9E-15 4E-20 118.1 13.9 122 25-158 6-133 (276)
10 PLN02385 hydrolase; alpha/beta 99.7 2.4E-15 5.2E-20 121.7 14.0 123 26-158 68-198 (349)
11 PRK10749 lysophospholipase L2; 99.7 4.2E-15 9E-20 119.5 14.9 127 20-157 31-166 (330)
12 COG1647 Esterase/lipase [Gener 99.6 2.1E-15 4.5E-20 112.5 10.7 104 43-158 15-119 (243)
13 PLN02824 hydrolase, alpha/beta 99.6 8.7E-15 1.9E-19 115.4 14.4 119 22-157 10-137 (294)
14 TIGR03100 hydr1_PEP hydrolase, 99.6 1.4E-14 2.9E-19 113.8 14.5 116 30-159 14-136 (274)
15 TIGR02240 PHA_depoly_arom poly 99.6 6.8E-15 1.5E-19 115.1 12.0 121 22-158 4-127 (276)
16 PRK05077 frsA fermentation/res 99.6 1.4E-14 3E-19 120.0 13.7 114 29-157 180-300 (414)
17 PRK10566 esterase; Provisional 99.6 3.3E-14 7.2E-19 109.4 14.3 123 28-155 10-139 (249)
18 PLN02652 hydrolase; alpha/beta 99.6 1.9E-14 4.2E-19 118.4 13.7 113 34-157 127-245 (395)
19 TIGR03056 bchO_mg_che_rel puta 99.6 6E-14 1.3E-18 108.7 14.8 122 21-158 7-131 (278)
20 PLN02211 methyl indole-3-aceta 99.6 2.5E-14 5.3E-19 112.3 12.3 113 29-157 6-122 (273)
21 TIGR01250 pro_imino_pep_2 prol 99.6 5E-14 1.1E-18 108.8 13.9 120 25-157 7-131 (288)
22 KOG4178 Soluble epoxide hydrol 99.6 5.5E-14 1.2E-18 110.7 13.6 122 22-158 24-149 (322)
23 PRK03592 haloalkane dehalogena 99.6 5.6E-14 1.2E-18 110.9 13.7 116 22-156 9-127 (295)
24 PLN00021 chlorophyllase 99.6 1.7E-13 3.6E-18 109.6 15.5 112 28-157 37-166 (313)
25 PLN02965 Probable pheophorbida 99.5 7E-14 1.5E-18 108.2 11.7 98 45-156 5-106 (255)
26 TIGR03343 biphenyl_bphD 2-hydr 99.5 1.2E-13 2.6E-18 107.8 13.0 102 42-157 29-136 (282)
27 PLN02679 hydrolase, alpha/beta 99.5 1.6E-13 3.5E-18 111.7 13.7 100 43-157 88-191 (360)
28 PRK10673 acyl-CoA esterase; Pr 99.5 2.1E-13 4.5E-18 104.9 12.6 102 38-156 11-115 (255)
29 PRK03204 haloalkane dehalogena 99.5 4.6E-13 9.9E-18 105.7 14.4 119 21-157 15-136 (286)
30 PF12695 Abhydrolase_5: Alpha/ 99.5 9.9E-14 2.1E-18 97.9 9.6 103 45-170 1-107 (145)
31 TIGR03611 RutD pyrimidine util 99.5 2.7E-13 5.9E-18 103.3 11.0 102 41-157 11-115 (257)
32 PF12697 Abhydrolase_6: Alpha/ 99.5 1.6E-13 3.4E-18 101.9 9.4 99 46-159 1-103 (228)
33 PRK11126 2-succinyl-6-hydroxy- 99.5 2.9E-13 6.2E-18 103.4 11.0 97 43-157 2-102 (242)
34 TIGR03695 menH_SHCHC 2-succiny 99.5 6.6E-13 1.4E-17 99.9 11.5 99 44-157 2-105 (251)
35 PRK10985 putative hydrolase; P 99.5 7.2E-13 1.6E-17 106.3 12.1 106 42-158 57-169 (324)
36 KOG1455 Lysophospholipase [Lip 99.5 2.4E-12 5.2E-17 100.4 14.4 131 24-164 32-171 (313)
37 PRK10349 carboxylesterase BioH 99.5 4.8E-13 1E-17 103.4 10.3 93 44-157 14-109 (256)
38 PLN03084 alpha/beta hydrolase 99.4 3.1E-12 6.7E-17 105.0 14.5 130 13-158 96-233 (383)
39 PLN02894 hydrolase, alpha/beta 99.4 2.6E-12 5.7E-17 106.1 14.1 108 41-159 103-213 (402)
40 PLN02511 hydrolase 99.4 1.1E-12 2.3E-17 108.0 11.5 106 41-157 98-210 (388)
41 TIGR02427 protocat_pcaD 3-oxoa 99.4 7.4E-13 1.6E-17 100.0 9.6 100 42-157 12-114 (251)
42 PLN02578 hydrolase 99.4 2.6E-12 5.6E-17 104.3 13.3 115 24-157 70-187 (354)
43 PF12740 Chlorophyllase2: Chlo 99.4 2E-12 4.3E-17 99.9 11.8 106 33-157 7-131 (259)
44 PLN03087 BODYGUARD 1 domain co 99.4 6.9E-12 1.5E-16 105.3 15.5 121 25-158 181-310 (481)
45 TIGR01607 PST-A Plasmodium sub 99.4 2.2E-12 4.9E-17 103.9 11.8 91 61-158 64-186 (332)
46 PRK06489 hypothetical protein; 99.4 2E-12 4.3E-17 105.2 11.4 117 26-157 46-189 (360)
47 PRK08775 homoserine O-acetyltr 99.4 6.2E-13 1.3E-17 107.5 8.2 114 26-157 42-173 (343)
48 PRK14875 acetoin dehydrogenase 99.4 1E-11 2.2E-16 100.6 13.2 117 25-158 114-233 (371)
49 TIGR01738 bioH putative pimelo 99.4 2.9E-12 6.3E-17 96.5 9.0 93 44-157 5-100 (245)
50 TIGR01840 esterase_phb esteras 99.4 4.7E-12 1E-16 95.8 9.8 117 33-158 2-131 (212)
51 TIGR01249 pro_imino_pep_1 prol 99.4 9.2E-12 2E-16 99.0 11.9 121 22-158 7-131 (306)
52 PF06500 DUF1100: Alpha/beta h 99.4 2.7E-12 5.8E-17 104.8 8.7 116 28-157 175-296 (411)
53 KOG2564 Predicted acetyltransf 99.4 1.1E-11 2.3E-16 95.8 11.0 114 29-154 61-179 (343)
54 PF07224 Chlorophyllase: Chlor 99.4 7.1E-12 1.5E-16 96.0 9.9 109 31-157 34-157 (307)
55 TIGR01836 PHA_synth_III_C poly 99.3 1.3E-11 2.8E-16 100.1 12.0 120 26-158 44-172 (350)
56 TIGR00976 /NonD putative hydro 99.3 9.4E-12 2E-16 106.6 11.1 117 30-158 9-133 (550)
57 PRK07581 hypothetical protein; 99.3 2.5E-12 5.4E-17 103.6 7.2 127 26-157 22-159 (339)
58 cd00707 Pancreat_lipase_like P 99.3 1.4E-11 3E-16 97.0 10.4 108 41-158 34-148 (275)
59 PRK10162 acetyl esterase; Prov 99.3 2.7E-11 5.8E-16 97.2 11.9 113 28-158 67-196 (318)
60 KOG4409 Predicted hydrolase/ac 99.3 1.9E-11 4.2E-16 97.1 10.7 106 41-160 88-198 (365)
61 COG1506 DAP2 Dipeptidyl aminop 99.3 2.3E-11 4.9E-16 105.6 11.7 123 30-158 378-508 (620)
62 PRK05855 short chain dehydroge 99.3 3E-11 6.4E-16 103.2 12.2 107 22-144 5-114 (582)
63 PF12715 Abhydrolase_7: Abhydr 99.3 2E-11 4.3E-16 98.5 9.6 125 30-155 101-258 (390)
64 PLN02872 triacylglycerol lipas 99.3 8.8E-12 1.9E-16 102.6 6.5 137 17-158 42-198 (395)
65 TIGR01392 homoserO_Ac_trn homo 99.3 2E-11 4.3E-16 99.0 8.0 121 25-158 11-163 (351)
66 PF03403 PAF-AH_p_II: Platelet 99.2 2.2E-11 4.9E-16 99.7 7.3 129 41-170 98-277 (379)
67 PF05448 AXE1: Acetyl xylan es 99.2 6.3E-11 1.4E-15 95.0 9.4 129 30-161 69-213 (320)
68 TIGR03230 lipo_lipase lipoprot 99.2 2.3E-10 5E-15 94.9 12.4 106 42-158 40-155 (442)
69 TIGR01838 PHA_synth_I poly(R)- 99.2 5.5E-10 1.2E-14 94.9 14.6 141 3-157 146-302 (532)
70 TIGR02821 fghA_ester_D S-formy 99.2 5.6E-10 1.2E-14 87.7 13.5 125 32-157 29-173 (275)
71 PRK11071 esterase YqiA; Provis 99.2 1E-10 2.2E-15 87.3 8.5 89 44-158 2-94 (190)
72 COG2945 Predicted hydrolase of 99.2 2.9E-10 6.3E-15 83.5 9.7 105 40-157 25-137 (210)
73 PRK00175 metX homoserine O-ace 99.2 2.8E-10 6.1E-15 93.3 10.1 120 26-158 29-183 (379)
74 PF06342 DUF1057: Alpha/beta h 99.1 2E-09 4.3E-14 83.7 13.9 106 42-161 34-141 (297)
75 COG3458 Acetyl esterase (deace 99.1 8.9E-11 1.9E-15 90.4 5.6 140 25-166 62-219 (321)
76 PLN02980 2-oxoglutarate decarb 99.1 1.1E-09 2.4E-14 103.6 13.3 107 42-156 1370-1479(1655)
77 PLN02442 S-formylglutathione h 99.1 2.9E-09 6.4E-14 84.1 13.5 128 28-157 30-178 (283)
78 PF00326 Peptidase_S9: Prolyl 99.1 2.3E-10 4.9E-15 86.4 6.3 91 60-159 3-101 (213)
79 COG0657 Aes Esterase/lipase [L 99.1 3.4E-09 7.3E-14 84.6 13.0 113 30-160 64-194 (312)
80 TIGR03502 lipase_Pla1_cef extr 99.1 1.8E-09 4E-14 94.8 12.1 99 43-142 449-573 (792)
81 COG0429 Predicted hydrolase of 99.1 3.4E-09 7.5E-14 83.9 12.2 101 42-154 74-182 (345)
82 PRK07868 acyl-CoA synthetase; 99.1 2.3E-09 4.9E-14 97.7 12.9 120 25-157 44-177 (994)
83 KOG1552 Predicted alpha/beta h 99.1 3.7E-09 8E-14 81.1 11.8 114 30-159 48-165 (258)
84 PRK11460 putative hydrolase; P 99.1 4.2E-09 9.2E-14 80.9 12.3 111 40-158 13-139 (232)
85 PF07859 Abhydrolase_3: alpha/ 99.0 1.2E-09 2.5E-14 82.1 8.6 94 46-157 1-110 (211)
86 PF02129 Peptidase_S15: X-Pro 99.0 4.1E-09 8.9E-14 82.6 11.5 114 31-157 6-136 (272)
87 PRK10115 protease 2; Provision 99.0 5.5E-09 1.2E-13 91.7 12.5 112 41-158 443-560 (686)
88 KOG1838 Alpha/beta hydrolase [ 98.9 1E-08 2.2E-13 83.7 11.1 105 42-157 124-236 (409)
89 PF12146 Hydrolase_4: Putative 98.9 5.8E-09 1.3E-13 66.9 7.8 51 33-85 7-58 (79)
90 KOG1454 Predicted hydrolase/ac 98.9 4E-09 8.6E-14 84.9 8.3 97 42-151 57-157 (326)
91 KOG1515 Arylacetamide deacetyl 98.9 3E-08 6.5E-13 79.8 12.8 119 26-161 70-211 (336)
92 PF02273 Acyl_transf_2: Acyl t 98.9 1.4E-08 3.1E-13 77.4 9.8 116 30-157 15-134 (294)
93 PF01674 Lipase_2: Lipase (cla 98.9 2.9E-09 6.2E-14 81.0 6.1 88 44-142 2-93 (219)
94 COG4757 Predicted alpha/beta h 98.9 1E-08 2.2E-13 77.5 8.3 102 32-145 20-126 (281)
95 KOG3847 Phospholipase A2 (plat 98.9 5.2E-09 1.1E-13 82.2 6.8 120 41-161 116-279 (399)
96 COG4188 Predicted dienelactone 98.9 8.7E-09 1.9E-13 82.8 8.2 106 30-142 52-177 (365)
97 TIGR01839 PHA_synth_II poly(R) 98.9 6.1E-08 1.3E-12 82.3 13.4 142 3-158 173-329 (560)
98 KOG2382 Predicted alpha/beta h 98.8 1.4E-08 3.1E-13 80.3 7.1 98 41-152 50-154 (315)
99 PF06057 VirJ: Bacterial virul 98.8 1E-07 2.2E-12 70.4 10.0 100 44-159 3-109 (192)
100 KOG4391 Predicted alpha/beta h 98.7 8.4E-08 1.8E-12 72.1 8.8 121 28-165 63-192 (300)
101 COG2272 PnbA Carboxylesterase 98.7 5.9E-08 1.3E-12 80.6 8.6 127 26-158 76-218 (491)
102 PF00561 Abhydrolase_1: alpha/ 98.7 3.4E-08 7.3E-13 74.0 5.9 71 72-156 1-78 (230)
103 PF02230 Abhydrolase_2: Phosph 98.7 9.6E-08 2.1E-12 72.4 8.2 112 40-162 11-145 (216)
104 PF07819 PGAP1: PGAP1-like pro 98.7 4.6E-07 1E-11 69.4 11.9 107 42-159 3-125 (225)
105 KOG4667 Predicted esterase [Li 98.7 2.2E-07 4.7E-12 69.8 9.3 107 42-159 32-141 (269)
106 cd00312 Esterase_lipase Estera 98.6 9E-08 1.9E-12 80.9 7.8 122 26-159 75-215 (493)
107 PF00975 Thioesterase: Thioest 98.6 1.7E-07 3.7E-12 71.1 7.7 97 44-156 1-103 (229)
108 KOG2984 Predicted hydrolase [G 98.6 1.2E-07 2.5E-12 70.7 6.2 120 25-157 26-149 (277)
109 KOG2281 Dipeptidyl aminopeptid 98.6 3.2E-07 7E-12 78.2 9.4 120 32-157 628-762 (867)
110 COG3571 Predicted hydrolase of 98.6 1.4E-06 3E-11 62.7 10.9 115 44-170 15-145 (213)
111 PF00135 COesterase: Carboxyle 98.6 1.6E-07 3.5E-12 79.7 6.7 123 26-159 105-247 (535)
112 PF10503 Esterase_phd: Esteras 98.5 8.6E-07 1.9E-11 67.6 9.8 108 42-158 15-133 (220)
113 COG0596 MhpC Predicted hydrola 98.5 1.3E-06 2.8E-11 65.1 10.6 99 43-158 21-124 (282)
114 PF00151 Lipase: Lipase; Inte 98.5 1.4E-07 3.1E-12 76.0 5.5 110 41-160 69-190 (331)
115 KOG4627 Kynurenine formamidase 98.5 4E-07 8.8E-12 67.9 7.1 105 38-158 62-173 (270)
116 PF08538 DUF1749: Protein of u 98.5 1.7E-06 3.7E-11 68.4 10.2 115 30-158 20-149 (303)
117 PF05728 UPF0227: Uncharacteri 98.5 1E-06 2.2E-11 65.6 8.4 93 46-163 2-97 (187)
118 PF09752 DUF2048: Uncharacteri 98.5 1.1E-06 2.4E-11 70.6 8.8 117 30-151 77-203 (348)
119 PRK10439 enterobactin/ferric e 98.4 8.6E-06 1.9E-10 67.7 13.0 117 30-158 194-324 (411)
120 PF10230 DUF2305: Uncharacteri 98.4 6.7E-06 1.5E-10 64.5 11.6 109 43-160 2-125 (266)
121 PF05990 DUF900: Alpha/beta hy 98.4 4.8E-06 1.1E-10 64.1 10.4 108 41-159 16-139 (233)
122 PLN02733 phosphatidylcholine-s 98.4 6.7E-06 1.5E-10 68.7 11.5 89 58-160 108-204 (440)
123 KOG2100 Dipeptidyl aminopeptid 98.3 6.2E-06 1.3E-10 73.3 11.3 134 19-158 495-645 (755)
124 PRK06765 homoserine O-acetyltr 98.3 7.1E-07 1.5E-11 73.6 4.9 49 111-159 147-198 (389)
125 PF06821 Ser_hydrolase: Serine 98.3 5.5E-06 1.2E-10 60.8 9.0 85 46-158 1-92 (171)
126 PRK05371 x-prolyl-dipeptidyl a 98.3 5E-06 1.1E-10 74.0 9.6 83 62-156 270-372 (767)
127 COG0400 Predicted esterase [Ge 98.2 3.1E-06 6.7E-11 63.9 6.4 110 40-160 15-137 (207)
128 PF00756 Esterase: Putative es 98.2 5.8E-06 1.3E-10 63.6 7.0 47 111-157 99-150 (251)
129 KOG2624 Triglyceride lipase-ch 98.1 1.5E-05 3.2E-10 65.8 8.2 132 22-158 51-200 (403)
130 COG3509 LpqC Poly(3-hydroxybut 98.1 2.2E-05 4.8E-10 61.7 8.4 119 32-157 49-179 (312)
131 PF06028 DUF915: Alpha/beta hy 98.1 1.2E-05 2.5E-10 62.7 6.7 108 42-159 10-145 (255)
132 COG2936 Predicted acyl esteras 98.1 1.3E-05 2.8E-10 68.2 7.5 119 28-158 28-160 (563)
133 PF05057 DUF676: Putative seri 98.0 3.4E-05 7.3E-10 58.7 8.1 88 42-141 3-95 (217)
134 PF12048 DUF3530: Protein of u 98.0 0.00024 5.1E-09 57.0 13.0 133 28-160 70-232 (310)
135 PF08840 BAAT_C: BAAT / Acyl-C 98.0 1.1E-05 2.4E-10 61.2 4.6 52 109-160 4-59 (213)
136 COG3208 GrsT Predicted thioest 98.0 2.3E-05 4.9E-10 60.0 6.0 88 41-143 5-93 (244)
137 PF10340 DUF2424: Protein of u 97.9 0.00033 7.1E-09 57.2 12.7 117 28-160 104-238 (374)
138 PRK10252 entF enterobactin syn 97.9 7.9E-05 1.7E-09 69.7 10.2 96 43-156 1068-1170(1296)
139 COG4782 Uncharacterized protei 97.9 0.00016 3.4E-09 58.4 10.2 107 42-158 115-235 (377)
140 COG3319 Thioesterase domains o 97.9 0.00011 2.4E-09 57.2 9.1 97 44-158 1-104 (257)
141 KOG1553 Predicted alpha/beta h 97.8 8.2E-05 1.8E-09 59.8 7.8 94 44-154 244-342 (517)
142 COG4814 Uncharacterized protei 97.8 0.00019 4.2E-09 55.3 8.7 104 44-157 46-176 (288)
143 COG2021 MET2 Homoserine acetyl 97.8 6.2E-05 1.3E-09 60.9 6.3 115 42-158 50-183 (368)
144 PF03959 FSH1: Serine hydrolas 97.8 2.4E-05 5.1E-10 59.3 3.7 118 42-161 3-149 (212)
145 PF05677 DUF818: Chlamydia CHL 97.7 0.00028 6E-09 56.7 9.1 104 24-143 116-234 (365)
146 TIGR01849 PHB_depoly_PhaZ poly 97.7 0.00068 1.5E-08 56.2 11.4 113 30-158 86-209 (406)
147 COG3946 VirJ Type IV secretory 97.7 0.00024 5.2E-09 58.1 8.4 83 41-139 258-341 (456)
148 PRK04940 hypothetical protein; 97.7 0.00016 3.4E-09 53.4 6.3 39 124-163 60-98 (180)
149 COG3243 PhaC Poly(3-hydroxyalk 97.7 0.0004 8.6E-09 57.2 9.2 111 34-156 97-216 (445)
150 COG1075 LipA Predicted acetylt 97.7 0.00022 4.7E-09 57.8 7.6 102 43-160 59-167 (336)
151 PF02450 LCAT: Lecithin:choles 97.6 0.00044 9.5E-09 57.2 9.0 84 59-160 66-163 (389)
152 COG2819 Predicted hydrolase of 97.5 0.00047 1E-08 53.6 7.7 39 122-160 135-175 (264)
153 COG4099 Predicted peptidase [G 97.4 0.0012 2.6E-08 52.3 8.6 48 112-159 254-306 (387)
154 KOG3101 Esterase D [General fu 97.4 0.00036 7.8E-09 52.6 5.2 110 43-155 44-174 (283)
155 PF05577 Peptidase_S28: Serine 97.4 0.00071 1.5E-08 56.6 7.3 113 42-159 28-150 (434)
156 KOG1516 Carboxylesterase and r 97.4 0.00044 9.6E-09 59.3 6.2 124 26-158 93-233 (545)
157 PF03583 LIP: Secretory lipase 97.3 0.0015 3.3E-08 51.9 8.1 84 61-156 16-112 (290)
158 KOG2541 Palmitoyl protein thio 97.2 0.0047 1E-07 48.1 9.9 99 44-160 24-131 (296)
159 KOG2551 Phospholipase/carboxyh 97.2 0.0048 1E-07 46.8 9.5 115 42-159 4-149 (230)
160 PTZ00472 serine carboxypeptida 97.2 0.0047 1E-07 52.3 10.2 108 41-159 75-218 (462)
161 KOG3975 Uncharacterized conser 97.2 0.0092 2E-07 46.2 10.7 111 41-158 27-148 (301)
162 COG0627 Predicted esterase [Ge 97.1 0.003 6.6E-08 50.8 8.2 36 125-160 153-190 (316)
163 PF02089 Palm_thioest: Palmito 97.1 0.0057 1.2E-07 48.2 9.0 106 43-160 5-119 (279)
164 COG3545 Predicted esterase of 97.0 0.013 2.7E-07 43.0 9.9 37 124-160 59-97 (181)
165 KOG2237 Predicted serine prote 97.0 0.00061 1.3E-08 58.6 3.3 111 41-157 468-584 (712)
166 KOG3724 Negative regulator of 97.0 0.0079 1.7E-07 53.2 10.0 46 109-154 157-217 (973)
167 COG1770 PtrB Protease II [Amin 97.0 0.0027 5.8E-08 55.0 7.0 112 41-158 446-563 (682)
168 KOG2565 Predicted hydrolases o 96.9 0.009 2E-07 48.8 8.7 104 26-143 130-248 (469)
169 PF11187 DUF2974: Protein of u 96.8 0.0045 9.8E-08 47.4 6.6 49 112-160 69-126 (224)
170 PF07082 DUF1350: Protein of u 96.8 0.045 9.7E-07 42.4 12.0 93 33-142 9-108 (250)
171 PLN02606 palmitoyl-protein thi 96.7 0.04 8.7E-07 43.9 10.9 101 44-160 27-135 (306)
172 smart00824 PKS_TE Thioesterase 96.6 0.021 4.5E-07 41.8 8.7 82 58-156 13-101 (212)
173 KOG2183 Prolylcarboxypeptidase 96.5 0.0049 1.1E-07 50.8 5.1 99 44-146 81-190 (492)
174 PLN02517 phosphatidylcholine-s 96.4 0.016 3.4E-07 50.1 7.9 88 60-159 158-265 (642)
175 KOG2931 Differentiation-relate 96.4 0.16 3.5E-06 40.4 12.8 117 28-159 32-159 (326)
176 PF01764 Lipase_3: Lipase (cla 96.4 0.0069 1.5E-07 42.2 4.8 21 122-142 62-82 (140)
177 KOG2112 Lysophospholipase [Lip 96.3 0.03 6.4E-07 42.1 7.9 111 44-158 4-129 (206)
178 KOG2369 Lecithin:cholesterol a 96.3 0.011 2.4E-07 49.5 6.1 69 59-142 125-200 (473)
179 cd00741 Lipase Lipase. Lipase 96.3 0.011 2.3E-07 42.2 5.4 40 122-161 26-71 (153)
180 PF03096 Ndr: Ndr family; Int 96.2 0.058 1.3E-06 42.6 9.2 118 28-160 9-137 (283)
181 COG3150 Predicted esterase [Ge 96.2 0.04 8.7E-07 40.2 7.5 51 109-163 47-97 (191)
182 PLN02633 palmitoyl protein thi 96.1 0.14 3.1E-06 41.0 11.1 101 44-160 26-134 (314)
183 COG2382 Fes Enterochelin ester 96.1 0.071 1.5E-06 42.3 9.3 121 28-160 80-215 (299)
184 PF11288 DUF3089: Protein of u 95.9 0.03 6.5E-07 42.3 6.3 36 108-143 77-114 (207)
185 KOG4840 Predicted hydrolases o 95.7 0.15 3.3E-06 39.1 9.2 101 44-159 37-146 (299)
186 cd00519 Lipase_3 Lipase (class 95.5 0.032 7E-07 42.4 5.4 49 110-158 113-169 (229)
187 KOG2182 Hydrolytic enzymes of 95.5 0.078 1.7E-06 44.8 7.9 110 42-156 85-206 (514)
188 PF01083 Cutinase: Cutinase; 95.3 0.023 4.9E-07 42.0 3.8 50 109-158 65-123 (179)
189 PF06259 Abhydrolase_8: Alpha/ 95.2 0.081 1.8E-06 39.0 6.2 54 109-162 92-149 (177)
190 COG1505 Serine proteases of th 95.1 0.024 5.3E-07 48.8 3.8 108 42-155 420-533 (648)
191 KOG3967 Uncharacterized conser 94.8 0.45 9.8E-06 36.3 9.2 35 122-156 188-226 (297)
192 PLN00413 triacylglycerol lipas 94.2 0.11 2.4E-06 43.9 5.3 47 116-162 276-332 (479)
193 PF11339 DUF3141: Protein of u 94.1 0.65 1.4E-05 39.8 9.8 83 61-159 91-176 (581)
194 PLN03037 lipase class 3 family 93.8 0.05 1.1E-06 46.4 2.7 34 109-142 302-336 (525)
195 PLN02454 triacylglycerol lipas 93.7 0.084 1.8E-06 43.9 3.8 35 108-142 209-246 (414)
196 PLN02310 triacylglycerol lipas 93.6 0.06 1.3E-06 44.7 2.9 19 124-142 209-227 (405)
197 PF11144 DUF2920: Protein of u 93.2 3.4 7.3E-05 34.5 12.2 34 124-157 184-219 (403)
198 PF00450 Peptidase_S10: Serine 93.1 1.4 3.1E-05 36.2 10.2 37 123-159 135-183 (415)
199 KOG4372 Predicted alpha/beta h 92.6 0.29 6.2E-06 40.5 5.3 87 41-140 78-166 (405)
200 PF05705 DUF829: Eukaryotic pr 92.6 0.71 1.5E-05 35.3 7.3 96 46-157 2-112 (240)
201 KOG4389 Acetylcholinesterase/B 92.4 0.15 3.3E-06 43.3 3.5 144 4-159 91-257 (601)
202 PLN02571 triacylglycerol lipas 92.2 0.18 4E-06 42.0 3.7 18 125-142 227-244 (413)
203 PLN02934 triacylglycerol lipas 91.9 0.22 4.7E-06 42.5 3.9 32 111-142 307-339 (515)
204 KOG4388 Hormone-sensitive lipa 91.8 0.87 1.9E-05 39.7 7.3 97 42-158 395-509 (880)
205 PLN02162 triacylglycerol lipas 91.7 0.22 4.8E-06 42.0 3.7 43 120-162 274-326 (475)
206 PF10142 PhoPQ_related: PhoPQ- 91.6 6.9 0.00015 32.3 12.3 118 35-154 55-203 (367)
207 KOG3253 Predicted alpha/beta h 91.4 0.94 2E-05 39.6 7.2 97 42-154 175-283 (784)
208 COG2939 Carboxypeptidase C (ca 90.9 1.8 3.9E-05 37.0 8.3 123 30-159 87-238 (498)
209 PLN02847 triacylglycerol lipas 90.9 0.32 6.9E-06 42.3 4.0 19 124-142 251-269 (633)
210 PLN02408 phospholipase A1 90.8 0.32 7E-06 39.9 3.8 18 125-142 201-218 (365)
211 PLN02324 triacylglycerol lipas 90.3 0.35 7.6E-06 40.3 3.7 18 125-142 216-233 (415)
212 PLN02719 triacylglycerol lipas 90.2 0.36 7.9E-06 41.2 3.7 18 125-142 299-316 (518)
213 PF07519 Tannase: Tannase and 90.1 2.4 5.2E-05 36.2 8.6 92 67-159 55-152 (474)
214 PLN02802 triacylglycerol lipas 89.9 0.43 9.4E-06 40.7 3.9 18 125-142 331-348 (509)
215 TIGR03712 acc_sec_asp2 accesso 89.5 4 8.7E-05 34.9 9.2 105 32-155 279-388 (511)
216 PF06441 EHN: Epoxide hydrolas 89.2 1.1 2.3E-05 30.5 4.8 35 25-59 73-108 (112)
217 PF04301 DUF452: Protein of un 89.1 0.95 2.1E-05 34.4 4.9 45 122-166 55-99 (213)
218 PLN02753 triacylglycerol lipas 89.1 0.5 1.1E-05 40.5 3.7 19 124-142 312-330 (531)
219 COG5153 CVT17 Putative lipase 88.5 1.6 3.4E-05 34.9 5.8 39 106-144 257-296 (425)
220 KOG4540 Putative lipase essent 88.5 1.6 3.4E-05 34.9 5.8 39 106-144 257-296 (425)
221 PLN02761 lipase class 3 family 88.1 0.41 8.9E-06 41.0 2.6 18 125-142 295-312 (527)
222 COG0529 CysC Adenylylsulfate k 88.0 9.2 0.0002 28.5 9.2 38 41-78 20-58 (197)
223 KOG4569 Predicted lipase [Lipi 86.9 0.84 1.8E-05 37.1 3.7 33 110-142 156-189 (336)
224 cd03413 CbiK_C Anaerobic cobal 86.6 7.4 0.00016 25.9 7.8 27 45-71 3-29 (103)
225 KOG1551 Uncharacterized conser 86.6 1.1 2.3E-05 35.5 3.8 79 62-143 132-214 (371)
226 PF09994 DUF2235: Uncharacteri 85.3 1.6 3.4E-05 34.5 4.4 37 107-143 73-111 (277)
227 COG4822 CbiK Cobalamin biosynt 83.8 11 0.00023 29.0 7.9 75 42-142 137-214 (265)
228 TIGR02884 spore_pdaA delta-lac 81.0 2.3 4.9E-05 32.4 3.7 35 44-78 187-221 (224)
229 COG1856 Uncharacterized homolo 81.0 22 0.00047 27.5 8.7 91 44-151 88-184 (275)
230 PF06309 Torsin: Torsin; Inte 80.7 1.1 2.3E-05 31.3 1.6 40 30-71 41-81 (127)
231 PLN03016 sinapoylglucose-malat 80.6 2.4 5.1E-05 35.8 3.9 35 123-157 164-210 (433)
232 cd03409 Chelatase_Class_II Cla 79.3 12 0.00027 24.0 6.4 21 109-129 45-65 (101)
233 PF01583 APS_kinase: Adenylyls 78.9 22 0.00047 25.7 8.5 37 43-79 1-38 (156)
234 PF05576 Peptidase_S37: PS-10 78.3 9.3 0.0002 32.1 6.5 103 42-156 62-168 (448)
235 KOG1202 Animal-type fatty acid 77.4 9.7 0.00021 36.5 6.9 95 41-159 2121-2221(2376)
236 KOG1282 Serine carboxypeptidas 77.1 5.9 0.00013 33.7 5.2 53 109-161 150-217 (454)
237 PLN02209 serine carboxypeptida 77.1 19 0.00042 30.4 8.3 35 124-158 167-213 (437)
238 PF08237 PE-PPE: PE-PPE domain 75.9 4.4 9.6E-05 31.0 3.9 20 123-142 47-66 (225)
239 PF05277 DUF726: Protein of un 75.1 4.8 0.0001 32.9 4.1 34 122-155 218-258 (345)
240 TIGR02764 spore_ybaN_pdaB poly 74.7 3.3 7.2E-05 30.4 2.9 34 45-78 153-188 (191)
241 COG3673 Uncharacterized conser 72.0 7.5 0.00016 31.7 4.3 100 42-142 30-140 (423)
242 KOG2029 Uncharacterized conser 71.6 5.1 0.00011 35.1 3.5 31 112-142 511-544 (697)
243 KOG2521 Uncharacterized conser 71.0 27 0.00058 28.7 7.4 85 42-140 37-125 (350)
244 PRK00923 sirohydrochlorin coba 70.4 31 0.00067 23.4 7.0 20 111-130 48-67 (126)
245 COG1073 Hydrolases of the alph 68.4 37 0.00081 25.7 7.7 38 41-79 47-84 (299)
246 TIGR01378 thi_PPkinase thiamin 68.2 14 0.0003 27.7 5.0 35 103-138 67-101 (203)
247 PTZ00445 p36-lilke protein; Pr 68.0 36 0.00078 26.0 7.0 94 58-160 29-146 (219)
248 PF04083 Abhydro_lipase: Parti 67.4 11 0.00023 22.8 3.5 35 22-56 15-56 (63)
249 PLN02757 sirohydrochlorine fer 67.2 35 0.00077 24.4 6.7 32 44-75 15-48 (154)
250 cd03416 CbiX_SirB_N Sirohydroc 66.4 31 0.00068 22.3 6.0 26 45-70 2-28 (101)
251 COG1564 THI80 Thiamine pyropho 66.1 19 0.0004 27.4 5.3 34 105-139 74-107 (212)
252 PF00698 Acyl_transf_1: Acyl t 66.0 4.8 0.0001 32.2 2.2 31 112-142 72-102 (318)
253 PF06792 UPF0261: Uncharacteri 65.3 75 0.0016 26.7 9.0 99 44-143 2-114 (403)
254 PRK10279 hypothetical protein; 63.6 8.7 0.00019 30.8 3.3 32 112-143 21-52 (300)
255 smart00827 PKS_AT Acyl transfe 62.7 8.9 0.00019 30.1 3.2 30 113-142 71-100 (298)
256 TIGR00632 vsr DNA mismatch end 62.4 12 0.00026 25.7 3.3 15 63-77 99-113 (117)
257 cd03414 CbiX_SirB_C Sirohydroc 62.1 44 0.00095 22.2 6.3 22 110-131 46-67 (117)
258 cd07198 Patatin Patatin-like p 60.5 11 0.00024 27.2 3.1 32 112-143 14-45 (172)
259 TIGR03131 malonate_mdcH malona 60.0 10 0.00023 29.8 3.2 30 113-142 65-94 (295)
260 cd08194 Fe-ADH6 Iron-containin 60.0 66 0.0014 26.4 7.9 63 46-130 26-88 (375)
261 PF03853 YjeF_N: YjeF-related 59.5 35 0.00075 24.7 5.6 36 42-78 24-59 (169)
262 cd03818 GT1_ExpC_like This fam 58.6 15 0.00033 29.9 4.0 32 46-80 2-33 (396)
263 PF06180 CbiK: Cobalt chelatas 58.5 37 0.00079 26.7 5.9 61 42-131 141-205 (262)
264 cd07225 Pat_PNPLA6_PNPLA7 Pata 58.0 13 0.00027 29.9 3.3 60 59-143 3-62 (306)
265 cd07207 Pat_ExoU_VipD_like Exo 57.2 14 0.0003 27.0 3.2 32 112-143 15-46 (194)
266 PF03283 PAE: Pectinacetyleste 56.9 14 0.0003 30.5 3.4 34 109-142 138-174 (361)
267 cd07211 Pat_PNPLA8 Patatin-lik 56.8 26 0.00055 27.9 4.9 17 127-143 44-60 (308)
268 cd07227 Pat_Fungal_NTE1 Fungal 55.9 15 0.00032 29.0 3.3 32 112-143 26-57 (269)
269 PF10096 DUF2334: Uncharacteri 55.9 92 0.002 24.0 7.7 71 45-131 2-76 (243)
270 cd07210 Pat_hypo_W_succinogene 55.4 17 0.00036 27.7 3.4 32 112-143 16-47 (221)
271 TIGR02873 spore_ylxY probable 54.5 18 0.00039 28.5 3.6 34 44-78 231-264 (268)
272 TIGR00128 fabD malonyl CoA-acy 54.3 14 0.00031 28.7 3.0 30 113-142 71-101 (290)
273 PHA01735 hypothetical protein 54.1 12 0.00025 23.1 1.9 23 108-130 32-54 (76)
274 TIGR03709 PPK2_rel_1 polyphosp 53.1 30 0.00065 27.3 4.6 37 42-78 54-91 (264)
275 PRK05368 homoserine O-succinyl 52.5 16 0.00035 29.4 3.0 31 109-142 122-152 (302)
276 COG0603 Predicted PP-loop supe 52.4 70 0.0015 24.5 6.3 36 43-83 3-38 (222)
277 PRK06490 glutamine amidotransf 52.3 37 0.0008 26.2 5.0 17 125-141 86-102 (239)
278 cd08189 Fe-ADH5 Iron-containin 51.9 88 0.0019 25.7 7.4 63 45-129 28-90 (374)
279 PRK15454 ethanol dehydrogenase 51.9 1E+02 0.0022 25.7 7.8 63 45-129 51-113 (395)
280 KOG2170 ATPase of the AAA+ sup 51.7 11 0.00025 30.4 2.0 41 29-71 97-138 (344)
281 COG3340 PepE Peptidase E [Amin 51.5 79 0.0017 24.2 6.4 39 42-80 31-71 (224)
282 cd03415 CbiX_CbiC Archaeal sir 51.0 79 0.0017 21.8 7.2 20 111-130 46-65 (125)
283 COG1752 RssA Predicted esteras 49.2 19 0.00042 28.6 3.1 32 112-143 27-58 (306)
284 cd08551 Fe-ADH iron-containing 48.9 1.4E+02 0.0029 24.4 8.1 61 45-127 25-85 (370)
285 cd07205 Pat_PNPLA6_PNPLA7_NTE1 48.8 27 0.00059 25.1 3.6 32 112-143 16-47 (175)
286 cd08171 GlyDH-like2 Glycerol d 47.8 63 0.0014 26.2 5.9 63 45-130 24-86 (345)
287 KOG1209 1-Acyl dihydroxyaceton 47.5 35 0.00076 26.4 4.0 33 44-78 7-39 (289)
288 cd08178 AAD_C C-terminal alcoh 47.4 88 0.0019 26.0 6.8 62 46-129 24-85 (398)
289 cd07209 Pat_hypo_Ecoli_Z1214_l 47.3 24 0.00051 26.6 3.2 33 112-144 14-46 (215)
290 cd08192 Fe-ADH7 Iron-containin 47.1 1.4E+02 0.0031 24.4 7.9 63 45-129 26-88 (370)
291 COG3494 Uncharacterized protei 46.9 68 0.0015 25.3 5.5 59 61-130 18-76 (279)
292 cd07224 Pat_like Patatin-like 46.6 23 0.00051 27.1 3.1 33 112-144 15-49 (233)
293 TIGR03707 PPK2_P_aer polyphosp 46.5 48 0.001 25.5 4.7 38 42-79 29-67 (230)
294 cd07228 Pat_NTE_like_bacteria 46.1 32 0.0007 24.8 3.6 32 112-143 16-47 (175)
295 KOG2385 Uncharacterized conser 46.0 30 0.00064 30.1 3.7 19 122-140 445-463 (633)
296 COG0084 TatD Mg-dependent DNas 45.3 55 0.0012 25.6 5.0 51 107-157 15-67 (256)
297 cd08193 HVD 5-hydroxyvalerate 45.2 1.3E+02 0.0029 24.6 7.5 63 45-129 28-90 (376)
298 PF13200 DUF4015: Putative gly 44.9 55 0.0012 26.5 5.0 79 47-130 2-85 (316)
299 COG3233 Predicted deacetylase 44.5 1.1E+02 0.0025 23.5 6.3 40 44-83 4-48 (233)
300 PRK09860 putative alcohol dehy 44.5 1.7E+02 0.0036 24.2 8.0 63 45-129 33-95 (383)
301 PRK09271 flavodoxin; Provision 44.4 1.1E+02 0.0023 21.7 6.1 90 45-135 3-100 (160)
302 cd08190 HOT Hydroxyacid-oxoaci 44.3 1.6E+02 0.0035 24.6 7.9 60 45-126 25-84 (414)
303 TIGR02638 lactal_redase lactal 44.2 1.4E+02 0.003 24.6 7.5 70 45-140 31-100 (379)
304 cd03131 GATase1_HTS Type 1 glu 44.0 7.8 0.00017 28.5 0.1 31 109-142 85-115 (175)
305 COG1255 Uncharacterized protei 44.0 26 0.00056 24.2 2.5 22 59-80 24-45 (129)
306 PF04084 ORC2: Origin recognit 43.9 1.8E+02 0.0038 23.7 8.8 88 46-137 56-150 (326)
307 cd08185 Fe-ADH1 Iron-containin 43.9 1.7E+02 0.0037 24.0 7.9 64 45-130 27-91 (380)
308 PF12242 Eno-Rase_NADH_b: NAD( 43.2 54 0.0012 20.8 3.7 34 109-142 21-58 (78)
309 cd07222 Pat_PNPLA4 Patatin-lik 42.9 28 0.00061 26.9 3.0 32 112-143 15-50 (246)
310 PLN03050 pyridoxine (pyridoxam 42.9 53 0.0011 25.5 4.5 33 45-78 62-94 (246)
311 PF03033 Glyco_transf_28: Glyc 42.4 19 0.00041 24.5 1.8 32 46-77 1-32 (139)
312 PF10686 DUF2493: Protein of u 42.1 51 0.0011 20.3 3.6 32 43-77 31-63 (71)
313 PRK10624 L-1,2-propanediol oxi 42.1 1.6E+02 0.0034 24.3 7.5 70 45-140 32-101 (382)
314 PF00465 Fe-ADH: Iron-containi 41.9 50 0.0011 26.9 4.5 63 45-129 23-85 (366)
315 PF02698 DUF218: DUF218 domain 41.8 75 0.0016 22.1 4.9 34 109-142 84-117 (155)
316 COG2830 Uncharacterized protei 41.4 18 0.0004 26.5 1.6 40 125-164 58-97 (214)
317 COG1087 GalE UDP-glucose 4-epi 40.4 1.6E+02 0.0035 23.9 6.9 100 47-158 3-121 (329)
318 PF01656 CbiA: CobQ/CobB/MinD/ 40.2 37 0.0008 24.4 3.2 21 59-79 15-35 (195)
319 cd02067 B12-binding B12 bindin 40.0 1.1E+02 0.0024 20.3 9.6 20 59-78 15-34 (119)
320 PF01872 RibD_C: RibD C-termin 39.7 1.1E+02 0.0023 22.4 5.7 48 108-158 120-168 (200)
321 PF14253 AbiH: Bacteriophage a 39.5 30 0.00066 26.7 2.8 15 122-136 233-247 (270)
322 cd08181 PPD-like 1,3-propanedi 39.0 1.9E+02 0.0042 23.5 7.5 63 45-129 27-90 (357)
323 cd01477 vWA_F09G8-8_type VWA F 38.8 1E+02 0.0022 22.9 5.3 37 43-79 132-169 (193)
324 COG3933 Transcriptional antite 38.5 2.5E+02 0.0054 24.1 7.9 74 42-140 108-181 (470)
325 PRK05782 bifunctional sirohydr 38.4 2.2E+02 0.0047 23.4 7.5 27 44-70 8-35 (335)
326 TIGR02690 resist_ArsH arsenica 38.2 1.2E+02 0.0027 23.1 5.8 28 109-137 107-141 (219)
327 cd01450 vWFA_subfamily_ECM Von 38.0 1.2E+02 0.0025 20.7 5.4 39 41-79 102-140 (161)
328 cd01974 Nitrogenase_MoFe_beta 38.0 2.1E+02 0.0045 24.1 7.7 77 58-141 313-394 (435)
329 cd07204 Pat_PNPLA_like Patatin 37.7 43 0.00093 25.8 3.3 32 112-143 15-50 (243)
330 COG0400 Predicted esterase [Ge 36.9 1.2E+02 0.0025 23.0 5.4 43 41-83 144-188 (207)
331 PRK13255 thiopurine S-methyltr 36.9 52 0.0011 24.9 3.6 16 64-79 52-67 (218)
332 PRK12828 short chain dehydroge 36.8 55 0.0012 24.1 3.8 31 46-79 9-39 (239)
333 KOG2585 Uncharacterized conser 36.4 79 0.0017 26.9 4.8 36 42-78 265-300 (453)
334 cd08176 LPO Lactadehyde:propan 36.3 2.4E+02 0.0052 23.2 7.7 63 45-129 30-92 (377)
335 PRK05568 flavodoxin; Provision 36.2 1.4E+02 0.003 20.3 6.9 38 42-80 82-119 (142)
336 cd04950 GT1_like_1 Glycosyltra 35.8 68 0.0015 26.1 4.4 37 44-80 5-42 (373)
337 PRK13256 thiopurine S-methyltr 35.8 28 0.00061 26.7 2.0 16 64-79 58-73 (226)
338 cd08188 Fe-ADH4 Iron-containin 35.6 2.5E+02 0.0053 23.1 7.6 63 45-129 30-92 (377)
339 cd03466 Nitrogenase_NifN_2 Nit 35.4 2.4E+02 0.0052 23.7 7.7 78 58-142 310-390 (429)
340 PRK10964 ADP-heptose:LPS hepto 35.4 77 0.0017 25.2 4.6 34 43-76 178-215 (322)
341 PF13378 MR_MLE_C: Enolase C-t 35.3 76 0.0016 20.8 3.9 57 59-142 6-63 (111)
342 COG0859 RfaF ADP-heptose:LPS h 35.2 74 0.0016 25.6 4.5 36 43-78 175-215 (334)
343 PF00289 CPSase_L_chain: Carba 34.9 41 0.00088 22.6 2.5 33 45-78 74-106 (110)
344 TIGR02069 cyanophycinase cyano 34.9 2.1E+02 0.0046 22.2 6.8 39 42-80 27-66 (250)
345 cd07208 Pat_hypo_Ecoli_yjju_li 34.8 45 0.00097 25.8 3.1 32 112-143 14-46 (266)
346 cd08187 BDH Butanol dehydrogen 34.7 2.2E+02 0.0049 23.4 7.3 62 46-129 31-93 (382)
347 TIGR03840 TMPT_Se_Te thiopurin 34.7 57 0.0012 24.6 3.5 16 64-79 49-64 (213)
348 PF13271 DUF4062: Domain of un 34.5 1.2E+02 0.0025 19.0 5.8 53 61-137 16-68 (83)
349 COG2185 Sbm Methylmalonyl-CoA 34.5 1.7E+02 0.0037 20.8 8.9 38 42-79 11-48 (143)
350 PRK02399 hypothetical protein; 34.5 2.8E+02 0.0062 23.4 8.7 99 44-143 4-116 (406)
351 cd01819 Patatin_and_cPLA2 Pata 34.4 49 0.0011 23.4 3.0 31 112-142 14-46 (155)
352 cd07230 Pat_TGL4-5_like Triacy 34.2 44 0.00095 28.2 3.0 32 112-143 89-120 (421)
353 cd08191 HHD 6-hydroxyhexanoate 34.2 2.7E+02 0.0058 23.0 7.7 33 46-78 25-57 (386)
354 PRK07053 glutamine amidotransf 34.0 98 0.0021 23.7 4.8 18 125-142 83-100 (234)
355 PF04263 TPK_catalytic: Thiami 34.0 40 0.00088 23.1 2.4 37 105-142 67-103 (123)
356 PF09989 DUF2229: CoA enzyme a 33.8 51 0.0011 25.1 3.1 37 43-79 183-220 (221)
357 PF04204 HTS: Homoserine O-suc 33.4 69 0.0015 25.7 3.9 30 109-141 121-150 (298)
358 PRK09072 short chain dehydroge 33.4 79 0.0017 24.0 4.2 31 46-79 7-37 (263)
359 TIGR00227 ribD_Cterm riboflavi 33.0 1.5E+02 0.0034 21.9 5.7 47 110-159 129-176 (216)
360 TIGR01303 IMP_DH_rel_1 IMP deh 33.0 2.3E+02 0.0051 24.3 7.2 61 58-142 224-284 (475)
361 PRK08177 short chain dehydroge 32.9 64 0.0014 23.9 3.6 31 46-79 3-33 (225)
362 cd08179 NADPH_BDH NADPH-depend 32.8 2.5E+02 0.0054 23.1 7.2 60 46-127 26-86 (375)
363 PRK03094 hypothetical protein; 32.6 53 0.0011 20.9 2.5 22 58-79 8-29 (80)
364 cd05312 NAD_bind_1_malic_enz N 32.4 1.4E+02 0.0031 23.7 5.5 93 58-157 39-144 (279)
365 COG4947 Uncharacterized protei 32.4 1.7E+02 0.0037 21.9 5.4 46 113-158 89-137 (227)
366 cd01983 Fer4_NifH The Fer4_Nif 32.1 75 0.0016 19.3 3.4 21 58-78 14-34 (99)
367 cd01423 MGS_CPS_I_III Methylgl 31.9 99 0.0021 20.6 4.1 21 57-77 12-32 (116)
368 PF09419 PGP_phosphatase: Mito 31.8 1.9E+02 0.004 21.2 5.6 53 66-134 35-88 (168)
369 TIGR03018 pepcterm_TyrKin exop 31.8 1.1E+02 0.0024 22.6 4.6 39 42-80 34-74 (207)
370 cd01469 vWA_integrins_alpha_su 31.7 1.4E+02 0.003 21.4 5.1 38 42-79 103-140 (177)
371 PF00290 Trp_syntA: Tryptophan 31.5 2.6E+02 0.0056 22.0 8.1 85 42-132 9-96 (259)
372 cd08183 Fe-ADH2 Iron-containin 31.3 2.7E+02 0.0058 22.8 7.2 59 46-130 25-83 (374)
373 PRK05625 5-amino-6-(5-phosphor 31.2 1.6E+02 0.0034 22.0 5.4 40 109-151 127-166 (217)
374 cd01453 vWA_transcription_fact 31.2 1.5E+02 0.0032 21.6 5.2 37 43-79 108-144 (183)
375 PRK07523 gluconate 5-dehydroge 31.1 92 0.002 23.4 4.2 31 46-79 12-42 (255)
376 COG3867 Arabinogalactan endo-1 30.5 3E+02 0.0066 22.5 7.3 36 45-80 216-253 (403)
377 PF10081 Abhydrolase_9: Alpha/ 30.3 2.9E+02 0.0062 22.2 10.1 106 45-159 35-149 (289)
378 PF01075 Glyco_transf_9: Glyco 30.2 65 0.0014 24.2 3.3 36 42-77 104-143 (247)
379 PF04244 DPRP: Deoxyribodipyri 30.1 1.9E+02 0.0041 22.2 5.7 22 58-79 49-70 (224)
380 PRK12824 acetoacetyl-CoA reduc 29.9 1E+02 0.0022 22.8 4.2 31 46-79 4-34 (245)
381 PRK06924 short chain dehydroge 29.8 97 0.0021 23.2 4.2 30 47-79 4-33 (251)
382 cd07995 TPK Thiamine pyrophosp 29.8 63 0.0014 24.1 3.0 36 106-142 74-109 (208)
383 PRK05370 argininosuccinate syn 29.7 2.5E+02 0.0053 24.1 6.6 108 42-157 11-131 (447)
384 cd08170 GlyDH Glycerol dehydro 29.7 1.5E+02 0.0033 24.0 5.5 61 46-130 25-85 (351)
385 PRK08339 short chain dehydroge 29.6 1E+02 0.0022 23.5 4.3 31 46-79 10-40 (263)
386 PRK05282 (alpha)-aspartyl dipe 29.6 2.6E+02 0.0057 21.5 8.4 38 43-80 31-70 (233)
387 PRK13230 nitrogenase reductase 29.6 84 0.0018 24.4 3.8 26 58-83 16-42 (279)
388 PRK07326 short chain dehydroge 29.5 82 0.0018 23.3 3.7 30 46-78 8-37 (237)
389 PRK08703 short chain dehydroge 29.4 1.1E+02 0.0023 22.8 4.3 31 46-79 8-38 (239)
390 TIGR01753 flav_short flavodoxi 29.2 1.8E+02 0.0039 19.5 6.9 37 43-79 81-118 (140)
391 PRK05568 flavodoxin; Provision 29.2 1E+02 0.0022 21.0 3.9 36 45-80 4-39 (142)
392 PF13207 AAA_17: AAA domain; P 29.1 80 0.0017 20.7 3.2 31 46-79 1-32 (121)
393 PRK06523 short chain dehydroge 28.9 95 0.0021 23.4 4.0 31 46-79 11-41 (260)
394 PHA02518 ParA-like protein; Pr 28.9 58 0.0013 23.8 2.7 23 58-80 16-38 (211)
395 PRK06603 enoyl-(acyl carrier p 28.8 1.2E+02 0.0026 23.2 4.5 32 46-78 10-41 (260)
396 cd07220 Pat_PNPLA2 Patatin-lik 28.8 68 0.0015 24.9 3.1 32 112-143 20-55 (249)
397 cd07020 Clp_protease_NfeD_1 No 28.7 2.3E+02 0.0051 20.6 7.1 32 113-144 49-84 (187)
398 PRK08265 short chain dehydroge 28.5 1.1E+02 0.0024 23.3 4.3 31 46-79 8-38 (261)
399 PF05724 TPMT: Thiopurine S-me 28.5 42 0.00091 25.5 1.9 16 64-79 52-67 (218)
400 PF07745 Glyco_hydro_53: Glyco 28.4 1.8E+02 0.0039 23.8 5.6 68 45-134 170-242 (332)
401 COG0426 FpaA Uncharacterized f 28.3 3.6E+02 0.0078 22.6 8.4 37 44-80 248-284 (388)
402 PRK07231 fabG 3-ketoacyl-(acyl 28.2 90 0.0019 23.2 3.7 31 46-79 7-37 (251)
403 PRK05653 fabG 3-ketoacyl-(acyl 28.1 1.1E+02 0.0024 22.5 4.2 30 46-78 7-36 (246)
404 PRK07814 short chain dehydroge 28.1 1.1E+02 0.0024 23.2 4.3 31 46-79 12-42 (263)
405 cd07229 Pat_TGL3_like Triacylg 28.1 71 0.0015 26.7 3.3 32 112-143 99-130 (391)
406 PRK07035 short chain dehydroge 28.1 1.1E+02 0.0024 22.9 4.2 31 46-79 10-40 (252)
407 COG2326 Uncharacterized conser 28.0 1.5E+02 0.0032 23.5 4.7 38 42-79 72-110 (270)
408 COG4425 Predicted membrane pro 28.0 2.4E+02 0.0052 24.4 6.2 32 109-140 379-413 (588)
409 TIGR01508 rib_reduct_arch 2,5- 27.9 2.2E+02 0.0048 21.2 5.7 39 110-151 124-162 (210)
410 PHA02519 plasmid partition pro 27.8 1E+02 0.0023 25.6 4.2 21 59-79 123-143 (387)
411 COG1506 DAP2 Dipeptidyl aminop 27.8 2.4E+02 0.0052 25.0 6.7 39 42-80 550-590 (620)
412 PRK07067 sorbitol dehydrogenas 27.8 1.1E+02 0.0025 22.9 4.3 31 46-79 8-38 (257)
413 PRK07024 short chain dehydroge 27.6 1.1E+02 0.0024 23.1 4.2 31 46-79 4-34 (257)
414 PRK05876 short chain dehydroge 27.5 1.1E+02 0.0024 23.6 4.2 31 46-79 8-38 (275)
415 PF03698 UPF0180: Uncharacteri 27.4 69 0.0015 20.4 2.4 21 59-79 9-29 (80)
416 PRK06505 enoyl-(acyl carrier p 27.3 1.3E+02 0.0028 23.2 4.5 32 46-78 9-40 (271)
417 PRK12429 3-hydroxybutyrate deh 27.2 1.2E+02 0.0025 22.7 4.2 31 46-79 6-36 (258)
418 PRK08643 acetoin reductase; Va 27.2 1.2E+02 0.0026 22.8 4.3 31 46-79 4-34 (256)
419 cd07232 Pat_PLPL Patain-like p 27.1 69 0.0015 26.9 3.1 32 112-143 83-114 (407)
420 PRK07984 enoyl-(acyl carrier p 27.1 1.3E+02 0.0028 23.1 4.5 32 46-78 8-39 (262)
421 PF08643 DUF1776: Fungal famil 27.1 1E+02 0.0023 24.8 3.9 31 46-78 5-35 (299)
422 COG1832 Predicted CoA-binding 27.1 1.4E+02 0.003 21.2 4.1 28 51-78 23-50 (140)
423 PRK06194 hypothetical protein; 27.1 1.2E+02 0.0025 23.4 4.2 31 46-79 8-38 (287)
424 COG0518 GuaA GMP synthase - Gl 27.0 1.7E+02 0.0037 21.9 4.9 32 111-142 65-96 (198)
425 PRK10425 DNase TatD; Provision 26.9 1.4E+02 0.0031 23.2 4.7 50 109-158 15-66 (258)
426 PRK08415 enoyl-(acyl carrier p 26.9 1.3E+02 0.0028 23.3 4.5 32 46-78 7-38 (274)
427 PRK12748 3-ketoacyl-(acyl-carr 26.7 1.3E+02 0.0028 22.7 4.3 33 46-79 7-39 (256)
428 COG1058 CinA Predicted nucleot 26.7 2.4E+02 0.0053 22.1 5.8 21 58-78 21-41 (255)
429 COG0635 HemN Coproporphyrinoge 26.6 2.5E+02 0.0054 23.6 6.3 55 59-133 174-228 (416)
430 PF08484 Methyltransf_14: C-me 26.5 1.5E+02 0.0032 21.4 4.3 45 109-154 55-101 (160)
431 PRK08085 gluconate 5-dehydroge 26.4 1.3E+02 0.0027 22.6 4.3 31 46-79 11-41 (254)
432 PRK08226 short chain dehydroge 26.4 1.3E+02 0.0027 22.8 4.3 31 46-79 8-38 (263)
433 cd02037 MRP-like MRP (Multiple 26.4 79 0.0017 22.4 3.0 22 59-80 16-37 (169)
434 PRK12745 3-ketoacyl-(acyl-carr 26.4 1.3E+02 0.0027 22.6 4.3 31 46-79 4-34 (256)
435 PRK06114 short chain dehydroge 26.3 1.3E+02 0.0027 22.7 4.2 31 46-79 10-40 (254)
436 PF02142 MGS: MGS-like domain 26.2 88 0.0019 20.0 2.9 19 60-78 2-20 (95)
437 PRK12823 benD 1,6-dihydroxycyc 26.0 1.3E+02 0.0028 22.6 4.3 31 46-79 10-40 (260)
438 KOG1610 Corticosteroid 11-beta 25.9 1.2E+02 0.0025 24.7 4.0 31 46-79 31-61 (322)
439 cd00532 MGS-like MGS-like doma 25.9 1.1E+02 0.0023 20.3 3.4 22 57-78 11-32 (112)
440 PRK05693 short chain dehydroge 25.9 1.3E+02 0.0027 23.0 4.2 30 46-78 3-32 (274)
441 COG0062 Uncharacterized conser 25.9 1.5E+02 0.0033 22.4 4.4 36 43-79 49-84 (203)
442 cd06259 YdcF-like YdcF-like. Y 25.8 2.3E+02 0.0049 19.5 6.5 34 109-142 81-114 (150)
443 PRK06550 fabG 3-ketoacyl-(acyl 25.6 1.3E+02 0.0029 22.1 4.2 31 46-79 7-37 (235)
444 PF13344 Hydrolase_6: Haloacid 25.6 2E+02 0.0043 18.7 6.9 67 59-132 18-89 (101)
445 TIGR01007 eps_fam capsular exo 25.5 1.4E+02 0.0029 21.9 4.2 22 59-80 34-55 (204)
446 cd07218 Pat_iPLA2 Calcium-inde 25.4 76 0.0016 24.6 2.8 32 112-143 16-49 (245)
447 PF08250 Sperm_act_pep: Sperm- 25.4 18 0.00039 13.6 -0.3 6 130-135 1-6 (10)
448 PRK05717 oxidoreductase; Valid 25.4 1.3E+02 0.0029 22.6 4.2 31 46-79 12-42 (255)
449 PRK10812 putative DNAse; Provi 25.3 1.9E+02 0.0041 22.6 5.1 50 109-158 20-71 (265)
450 PLN00200 argininosuccinate syn 25.2 2.3E+02 0.005 23.9 5.8 87 43-138 6-101 (404)
451 PRK06101 short chain dehydroge 25.2 1.3E+02 0.0028 22.4 4.1 31 46-79 3-33 (240)
452 cd07231 Pat_SDP1-like Sugar-De 25.1 83 0.0018 25.6 3.1 31 112-142 84-114 (323)
453 PRK05904 coproporphyrinogen II 25.0 3.3E+02 0.0071 22.3 6.6 25 109-133 170-194 (353)
454 cd01523 RHOD_Lact_B Member of 24.9 1.8E+02 0.0039 18.4 4.2 28 42-74 61-88 (100)
455 PRK07478 short chain dehydroge 24.8 1.4E+02 0.0031 22.4 4.3 30 46-78 8-37 (254)
456 PRK12481 2-deoxy-D-gluconate 3 24.8 1.4E+02 0.0031 22.5 4.3 31 46-79 10-40 (251)
457 PRK07454 short chain dehydroge 24.7 1.4E+02 0.0031 22.1 4.2 31 46-79 8-38 (241)
458 COG0331 FabD (acyl-carrier-pro 24.7 76 0.0017 25.6 2.8 30 113-142 72-103 (310)
459 PRK06483 dihydromonapterin red 24.7 1.4E+02 0.003 22.1 4.2 31 46-79 4-34 (236)
460 cd01471 vWA_micronemal_protein 24.6 2.3E+02 0.0049 20.2 5.2 38 42-79 108-145 (186)
461 cd03805 GT1_ALG2_like This fam 24.6 99 0.0021 24.8 3.5 32 46-78 3-37 (392)
462 PRK06200 2,3-dihydroxy-2,3-dih 24.5 1.4E+02 0.0031 22.6 4.2 31 46-79 8-38 (263)
463 PF09587 PGA_cap: Bacterial ca 24.5 2.1E+02 0.0047 21.8 5.2 39 42-80 184-225 (250)
464 COG3727 Vsr DNA G:T-mismatch r 24.5 1.4E+02 0.003 21.1 3.7 16 63-78 100-115 (150)
465 PRK09135 pteridine reductase; 24.4 1.5E+02 0.0032 22.0 4.3 31 46-79 8-38 (249)
466 cd01482 vWA_collagen_alphaI-XI 24.4 2.5E+02 0.0055 19.6 5.3 36 42-79 103-138 (164)
467 PF03848 TehB: Tellurite resis 24.4 62 0.0014 24.2 2.1 16 64-79 45-60 (192)
468 PRK07069 short chain dehydroge 24.3 1.3E+02 0.0029 22.3 4.0 30 47-79 2-31 (251)
469 PLN03049 pyridoxine (pyridoxam 24.3 1.1E+02 0.0024 26.1 3.8 34 45-79 61-94 (462)
470 PHA03392 egt ecdysteroid UDP-g 24.2 1.2E+02 0.0026 26.2 4.1 26 53-78 31-56 (507)
471 cd01475 vWA_Matrilin VWA_Matri 24.2 2.4E+02 0.0053 21.0 5.4 35 43-79 109-143 (224)
472 cd03145 GAT1_cyanophycinase Ty 24.2 3.1E+02 0.0068 20.6 6.0 38 42-79 28-66 (217)
473 PRK07890 short chain dehydroge 24.1 1.5E+02 0.0032 22.2 4.3 31 46-79 7-37 (258)
474 COG0022 AcoB Pyruvate/2-oxoglu 24.1 4E+02 0.0086 21.7 6.6 59 58-142 213-276 (324)
475 PRK07831 short chain dehydroge 24.1 1.3E+02 0.0029 22.7 4.0 31 46-78 19-49 (262)
476 PRK06841 short chain dehydroge 24.0 1.5E+02 0.0032 22.2 4.3 30 46-78 17-46 (255)
477 TIGR02802 Pal_lipo peptidoglyc 24.0 1.4E+02 0.0031 19.2 3.6 25 109-133 17-41 (104)
478 TIGR01830 3oxo_ACP_reduc 3-oxo 24.0 1.1E+02 0.0024 22.5 3.5 29 48-79 2-30 (239)
479 PRK06953 short chain dehydroge 24.0 1.3E+02 0.0027 22.2 3.8 31 46-79 3-33 (222)
480 cd05008 SIS_GlmS_GlmD_1 SIS (S 23.9 2.2E+02 0.0048 18.7 4.9 36 42-79 46-81 (126)
481 PRK06997 enoyl-(acyl carrier p 23.8 1.7E+02 0.0036 22.4 4.5 32 46-78 8-39 (260)
482 cd01424 MGS_CPS_II Methylglyox 23.8 1.3E+02 0.0028 19.8 3.4 22 57-78 12-33 (110)
483 cd07212 Pat_PNPLA9 Patatin-lik 23.8 57 0.0012 26.2 1.9 17 127-143 35-51 (312)
484 cd07221 Pat_PNPLA3 Patatin-lik 23.7 89 0.0019 24.3 3.0 32 112-143 16-51 (252)
485 COG0431 Predicted flavoprotein 23.7 2.5E+02 0.0055 20.4 5.3 32 111-142 86-119 (184)
486 PRK08945 putative oxoacyl-(acy 23.7 1.4E+02 0.0031 22.3 4.1 31 46-79 14-44 (247)
487 PRK07074 short chain dehydroge 23.6 1.5E+02 0.0033 22.2 4.2 31 46-79 4-34 (257)
488 cd08186 Fe-ADH8 Iron-containin 23.6 4.2E+02 0.0091 21.8 7.5 62 46-129 29-91 (383)
489 TIGR03371 cellulose_yhjQ cellu 23.6 1.2E+02 0.0027 22.7 3.7 22 59-80 18-39 (246)
490 PRK13705 plasmid-partitioning 23.5 1.1E+02 0.0024 25.4 3.7 21 59-79 123-143 (388)
491 PF01870 Hjc: Archaeal hollida 23.4 97 0.0021 20.0 2.6 20 61-80 4-23 (88)
492 TIGR02193 heptsyl_trn_I lipopo 23.3 1.7E+02 0.0037 23.1 4.6 36 42-77 178-217 (319)
493 PRK14569 D-alanyl-alanine synt 23.3 1.9E+02 0.0042 22.7 4.9 35 45-79 5-43 (296)
494 PRK10558 alpha-dehydro-beta-de 23.2 2.1E+02 0.0046 22.2 5.0 22 62-83 31-52 (256)
495 cd02040 NifH NifH gene encodes 23.2 1.3E+02 0.0029 22.9 3.9 25 58-82 16-41 (270)
496 COG1341 Predicted GTPase or GT 23.2 1.6E+02 0.0035 24.7 4.4 44 42-85 71-115 (398)
497 PRK13869 plasmid-partitioning 23.2 1.5E+02 0.0033 24.7 4.4 23 58-80 137-159 (405)
498 cd02032 Bchl_like This family 23.2 1.3E+02 0.0027 23.2 3.7 22 59-80 16-37 (267)
499 PRK10037 cell division protein 23.1 71 0.0015 24.4 2.3 22 59-80 18-39 (250)
500 PRK14059 hypothetical protein; 23.1 2.5E+02 0.0054 21.8 5.3 40 109-151 165-204 (251)
No 1
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.91 E-value=2.7e-23 Score=154.59 Aligned_cols=166 Identities=34% Similarity=0.589 Sum_probs=143.8
Q ss_pred CCcccccCCCCCCCCCCccceEEEeeCCeeEEEEccCCCCCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCCC
Q 030535 2 SGSQCFENPPKLSPGSGCGAGTVQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFY 81 (175)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~~ 81 (175)
..-+||..+.---++ ...|+.++++++..|+. ....+..+||++..++|.+.+..+..|+.++..||.|++||++.
T Consensus 2 ~~~~cc~~~~~~~~~--~~~g~~~~v~gldaYv~--gs~~~~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~ 77 (242)
T KOG3043|consen 2 QPMPCCPDGKIAAEV--DDGGREEEVGGLDAYVV--GSTSSKKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFR 77 (242)
T ss_pred CCCCCCCCccccccc--CCCCceEeecCeeEEEe--cCCCCCeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhc
Confidence 345677777665566 44688999999999999 65555578999999999998889999999999999999999999
Q ss_pred CCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcC-CCeEEEEEEeccHHHHHHhcc-CCCccEEEEecCCCCC
Q 030535 82 GDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKG-VSAIGAAGFCWGGVVAAKLAS-SHDIQAAVVLHPGAIT 159 (175)
Q Consensus 82 g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~-~~~i~v~G~S~GG~ia~~~a~-~~~v~~~v~~~p~~~~ 159 (175)
|.|+ .++........|++++++.....|+..+++||+.++ ..+|+++|+||||..+..+.. .+++.+++++||+...
T Consensus 78 Gdp~-~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~~f~a~v~~hps~~d 156 (242)
T KOG3043|consen 78 GDPW-SPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDPEFDAGVSFHPSFVD 156 (242)
T ss_pred CCCC-CCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeeccchhheeeeEecCCcCC
Confidence 9888 566667778899999999999999999999999887 568999999999999998654 4699999999999999
Q ss_pred cccccccCccccc
Q 030535 160 VDDINGKFETSQA 172 (175)
Q Consensus 160 ~~~~~~~~~p~~~ 172 (175)
.+++.++..|++.
T Consensus 157 ~~D~~~vk~Pilf 169 (242)
T KOG3043|consen 157 SADIANVKAPILF 169 (242)
T ss_pred hhHHhcCCCCEEE
Confidence 9999999988753
No 2
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.84 E-value=9.7e-20 Score=140.10 Aligned_cols=142 Identities=24% Similarity=0.412 Sum_probs=108.0
Q ss_pred CCeeEEEEccCCCCCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCCCCCCCC-CCCCchhhHHH-HHHhcCCC
Q 030535 28 GGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIV-DLNNPQFDREA-WRKIHNTD 105 (175)
Q Consensus 28 ~~~~~~~~~p~~~~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~~g~~~~-~~~~~~~~~~~-~~~~~~~~ 105 (175)
+.+++|+.+|......|+||++|+++|.+ ..++.++++||++||.|++||++.+.... ...+....... ...+....
T Consensus 12 ~~~~~~~a~P~~~~~~P~VIv~hei~Gl~-~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (236)
T COG0412 12 GELPAYLARPAGAGGFPGVIVLHEIFGLN-PHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPA 90 (236)
T ss_pred ceEeEEEecCCcCCCCCEEEEEecccCCc-hHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHH
Confidence 56788999877766669999999999998 68999999999999999999998543220 11111111111 22234446
Q ss_pred cchhHHHHHHHHHHhcC---CCeEEEEEEeccHHHHHHhccC-CCccEEEEecCCCCCc--ccccccCccc
Q 030535 106 KGYVDAKSVIAALKSKG---VSAIGAAGFCWGGVVAAKLASS-HDIQAAVVLHPGAITV--DDINGKFETS 170 (175)
Q Consensus 106 ~~~~d~~~~~~~l~~~~---~~~i~v~G~S~GG~ia~~~a~~-~~v~~~v~~~p~~~~~--~~~~~~~~p~ 170 (175)
+...|+.+++++|+.+. .++|+++||||||.+++.++.. +++++.|++||..... .+..+...|+
T Consensus 91 ~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~~v~a~v~fyg~~~~~~~~~~~~~~~pv 161 (236)
T COG0412 91 EVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAPEVKAAVAFYGGLIADDTADAPKIKVPV 161 (236)
T ss_pred HHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccCCccEEEEecCCCCCCcccccccccCcE
Confidence 78899999999999875 5689999999999999999876 4899999999999843 4444555554
No 3
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.83 E-value=2.3e-20 Score=141.70 Aligned_cols=139 Identities=29% Similarity=0.509 Sum_probs=97.2
Q ss_pred eeEEEEccCCCCCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHH---HHhcCCCc
Q 030535 30 LNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAW---RKIHNTDK 106 (175)
Q Consensus 30 ~~~~~~~p~~~~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~---~~~~~~~~ 106 (175)
+++|+..|...++.|+||++|+++|.+ ...+.+++.|+++||.|++||++.|.+. .+.........+ .... .+.
T Consensus 1 ~~ay~~~P~~~~~~~~Vvv~~d~~G~~-~~~~~~ad~lA~~Gy~v~~pD~f~~~~~-~~~~~~~~~~~~~~~~~~~-~~~ 77 (218)
T PF01738_consen 1 IDAYVARPEGGGPRPAVVVIHDIFGLN-PNIRDLADRLAEEGYVVLAPDLFGGRGA-PPSDPEEAFAAMRELFAPR-PEQ 77 (218)
T ss_dssp EEEEEEEETTSSSEEEEEEE-BTTBS--HHHHHHHHHHHHTT-EEEEE-CCCCTS---CCCHHCHHHHHHHCHHHS-HHH
T ss_pred CeEEEEeCCCCCCCCEEEEEcCCCCCc-hHHHHHHHHHHhcCCCEEecccccCCCC-CccchhhHHHHHHHHHhhh-HHH
Confidence 467898777666789999999999998 7889999999999999999999977652 123222222222 1112 345
Q ss_pred chhHHHHHHHHHHhcC---CCeEEEEEEeccHHHHHHhccC-CCccEEEEecCC-CCC--cccccccCcccc
Q 030535 107 GYVDAKSVIAALKSKG---VSAIGAAGFCWGGVVAAKLASS-HDIQAAVVLHPG-AIT--VDDINGKFETSQ 171 (175)
Q Consensus 107 ~~~d~~~~~~~l~~~~---~~~i~v~G~S~GG~ia~~~a~~-~~v~~~v~~~p~-~~~--~~~~~~~~~p~~ 171 (175)
...|+.+++++++++. .++|+++|+||||.+++.+|.. ++++++|.+||. ... .++...+..|+.
T Consensus 78 ~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~~~~~a~v~~yg~~~~~~~~~~~~~~~~P~l 149 (218)
T PF01738_consen 78 VAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARDPRVDAAVSFYGGSPPPPPLEDAPKIKAPVL 149 (218)
T ss_dssp HHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCTTTSSEEEEES-SSSGGGHHHHGGG--S-EE
T ss_pred HHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhccccceEEEEcCCCCCCcchhhhcccCCCEe
Confidence 6688999999999875 4699999999999999998865 589999999993 222 234555666653
No 4
>PRK13604 luxD acyl transferase; Provisional
Probab=99.75 E-value=2.2e-17 Score=130.47 Aligned_cols=118 Identities=17% Similarity=0.201 Sum_probs=90.2
Q ss_pred eeEEEEccCC--CCCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-C-CCCCCCCCCchhhHHHHHHhcCCC
Q 030535 30 LNTYVTGSGP--PDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-Y-GDPIVDLNNPQFDREAWRKIHNTD 105 (175)
Q Consensus 30 ~~~~~~~p~~--~~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~-g~~~~~~~~~~~~~~~~~~~~~~~ 105 (175)
+++|+..|+. ..+.+.||++||..+ +...+..+|++|+++||+|+++|++ + |.+. ....+ ....
T Consensus 22 L~Gwl~~P~~~~~~~~~~vIi~HGf~~-~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~--G~~~~---------~t~s 89 (307)
T PRK13604 22 IRVWETLPKENSPKKNNTILIASGFAR-RMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSS--GTIDE---------FTMS 89 (307)
T ss_pred EEEEEEcCcccCCCCCCEEEEeCCCCC-ChHHHHHHHHHHHHCCCEEEEecCCCCCCCCC--Ccccc---------Cccc
Confidence 6688887652 235678888985544 4456899999999999999999987 4 5443 11111 1122
Q ss_pred cchhHHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhccCCCccEEEEecCCCCC
Q 030535 106 KGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSHDIQAAVVLHPGAIT 159 (175)
Q Consensus 106 ~~~~d~~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a~~~~v~~~v~~~p~~~~ 159 (175)
....|+.++++|+++++.++|+++||||||.+++..|.+.+++++|+.+|...-
T Consensus 90 ~g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~~v~~lI~~sp~~~l 143 (307)
T PRK13604 90 IGKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEIDLSFLITAVGVVNL 143 (307)
T ss_pred ccHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCCCCCEEEEcCCcccH
Confidence 234899999999998877899999999999999888877679999999998763
No 5
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.71 E-value=2.8e-16 Score=122.77 Aligned_cols=122 Identities=16% Similarity=0.182 Sum_probs=88.8
Q ss_pred CCeeEEEEccCCCCCCeEEEEecCCCCCC---cchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcC
Q 030535 28 GGLNTYVTGSGPPDSKSAILLISDVFGYE---APLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHN 103 (175)
Q Consensus 28 ~~~~~~~~~p~~~~~~~~vv~lhg~~g~~---~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~ 103 (175)
+...++++.|....+++.||++||+.+.. ...+..+++.|+++||.|+++|++ +|.+. ... .......|.
T Consensus 10 g~~~~~~~~p~~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~-g~~-~~~~~~~~~---- 83 (266)
T TIGR03101 10 GFRFCLYHPPVAVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSA-GDF-AAARWDVWK---- 83 (266)
T ss_pred CcEEEEEecCCCCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCC-Ccc-ccCCHHHHH----
Confidence 33456666444444568899999654321 134667899999999999999999 77654 111 122233343
Q ss_pred CCcchhHHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhccC--CCccEEEEecCCCCCc
Q 030535 104 TDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPGAITV 160 (175)
Q Consensus 104 ~~~~~~d~~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~~~~~ 160 (175)
+|+..+++++++++..++.++||||||.+++.+|.. .+++++|+++|.....
T Consensus 84 -----~Dv~~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g~ 137 (266)
T TIGR03101 84 -----EDVAAAYRWLIEQGHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSGK 137 (266)
T ss_pred -----HHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccchH
Confidence 889999999998877899999999999999998743 5799999999876643
No 6
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.70 E-value=1e-15 Score=121.29 Aligned_cols=122 Identities=20% Similarity=0.336 Sum_probs=87.7
Q ss_pred ceEEEeeCC-----eeEEEEccCCCCCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCC-chh
Q 030535 21 AGTVQQLGG-----LNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNN-PQF 93 (175)
Q Consensus 21 ~~~~~~~~~-----~~~~~~~p~~~~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~-~~~ 93 (175)
.+.+.++++ ++.++.. .....+|+|||+||+.+.. ..|..+++.|+++||+|+++|++ +|.+. .+.. .+.
T Consensus 20 ~~~~~~~~~~~~~~~~i~y~~-~G~~~~~~lvliHG~~~~~-~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~-~~~~~~~~ 96 (302)
T PRK00870 20 APHYVDVDDGDGGPLRMHYVD-EGPADGPPVLLLHGEPSWS-YLYRKMIPILAAAGHRVIAPDLIGFGRSD-KPTRREDY 96 (302)
T ss_pred CceeEeecCCCCceEEEEEEe-cCCCCCCEEEEECCCCCch-hhHHHHHHHHHhCCCEEEEECCCCCCCCC-CCCCcccC
Confidence 366777877 6766663 2222457899999765554 67899999999889999999999 78764 2221 122
Q ss_pred hHHHHHHhcCCCcchhHHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhccC--CCccEEEEecCCC
Q 030535 94 DREAWRKIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPGA 157 (175)
Q Consensus 94 ~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~~ 157 (175)
++. ..++.+.+++++.+.+++.++||||||.+++.+|.. .+|+++|++++..
T Consensus 97 ~~~------------~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 150 (302)
T PRK00870 97 TYA------------RHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGL 150 (302)
T ss_pred CHH------------HHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCC
Confidence 232 234445555555567799999999999999998854 4899999998753
No 7
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.69 E-value=1.3e-15 Score=122.25 Aligned_cols=127 Identities=17% Similarity=0.119 Sum_probs=88.7
Q ss_pred eEEEeeCCeeEEEE--ccCCC-CCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHH
Q 030535 22 GTVQQLGGLNTYVT--GSGPP-DSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREA 97 (175)
Q Consensus 22 ~~~~~~~~~~~~~~--~p~~~-~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~ 97 (175)
+.++..++.+.++. .|... .+++.||++||+.......+..+++.|+++||+|+++|++ +|.+. .......++.
T Consensus 35 ~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~-~~~~~~~~~~- 112 (330)
T PLN02298 35 SFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSE-GLRAYVPNVD- 112 (330)
T ss_pred ceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCC-CccccCCCHH-
Confidence 44556677776543 22222 3567899999765432234677889999999999999999 88654 1111111222
Q ss_pred HHHhcCCCcchhHHHHHHHHHHhcC---CCeEEEEEEeccHHHHHHhcc-CC-CccEEEEecCCCC
Q 030535 98 WRKIHNTDKGYVDAKSVIAALKSKG---VSAIGAAGFCWGGVVAAKLAS-SH-DIQAAVVLHPGAI 158 (175)
Q Consensus 98 ~~~~~~~~~~~~d~~~~~~~l~~~~---~~~i~v~G~S~GG~ia~~~a~-~~-~v~~~v~~~p~~~ 158 (175)
...+|+.+++++++... ..+++|+||||||.+++.++. .+ +++++|+++|...
T Consensus 113 --------~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~ 170 (330)
T PLN02298 113 --------LVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCK 170 (330)
T ss_pred --------HHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEeccccc
Confidence 23489999999998642 347999999999999999874 34 6999999998653
No 8
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.67 E-value=1.6e-15 Score=120.44 Aligned_cols=131 Identities=18% Similarity=0.176 Sum_probs=96.7
Q ss_pred ccceEEEeeCCeeEEEE-ccCCCCCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCC-CCCCchhhH
Q 030535 19 CGAGTVQQLGGLNTYVT-GSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIV-DLNNPQFDR 95 (175)
Q Consensus 19 ~~~~~~~~~~~~~~~~~-~p~~~~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~-~~~~~~~~~ 95 (175)
...+.+...++.+.++. ++....+...||++| |.+.+...|..+++.|+.+||.|+++|++ +|.+.. +... -.++
T Consensus 9 ~~~~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~H-G~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~-~~~f 86 (298)
T COG2267 9 RTEGYFTGADGTRLRYRTWAAPEPPKGVVVLVH-GLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGH-VDSF 86 (298)
T ss_pred cccceeecCCCceEEEEeecCCCCCCcEEEEec-CchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCC-chhH
Confidence 34567778888886544 323333446788888 55655678999999999999999999999 787641 1111 1113
Q ss_pred HHHHHhcCCCcchhHHHHHHHHHHhc-CCCeEEEEEEeccHHHHHHhccC--CCccEEEEecCCCCCc
Q 030535 96 EAWRKIHNTDKGYVDAKSVIAALKSK-GVSAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPGAITV 160 (175)
Q Consensus 96 ~~~~~~~~~~~~~~d~~~~~~~l~~~-~~~~i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~~~~~ 160 (175)
. ..++|+..+++.+.+. ...+++++||||||.|++.++.+ ++++++|+.+|.+...
T Consensus 87 ~---------~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~ 145 (298)
T COG2267 87 A---------DYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLG 145 (298)
T ss_pred H---------HHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCC
Confidence 3 3348999999999875 34599999999999999998754 5899999999998754
No 9
>PHA02857 monoglyceride lipase; Provisional
Probab=99.67 E-value=1.9e-15 Score=118.05 Aligned_cols=122 Identities=15% Similarity=0.112 Sum_probs=84.7
Q ss_pred EeeCCee--EEEEccCCCCCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHh
Q 030535 25 QQLGGLN--TYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKI 101 (175)
Q Consensus 25 ~~~~~~~--~~~~~p~~~~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~ 101 (175)
...++.+ .+.+.|. ..+++.|+++||+.+ +...|..+++.|+++||+|+++|++ +|.+. ...........+
T Consensus 6 ~~~~g~~l~~~~~~~~-~~~~~~v~llHG~~~-~~~~~~~~~~~l~~~g~~via~D~~G~G~S~-~~~~~~~~~~~~--- 79 (276)
T PHA02857 6 FNLDNDYIYCKYWKPI-TYPKALVFISHGAGE-HSGRYEELAENISSLGILVFSHDHIGHGRSN-GEKMMIDDFGVY--- 79 (276)
T ss_pred ecCCCCEEEEEeccCC-CCCCEEEEEeCCCcc-ccchHHHHHHHHHhCCCEEEEccCCCCCCCC-CccCCcCCHHHH---
Confidence 3445544 3445443 345577777796644 4578999999999999999999999 88654 111111122222
Q ss_pred cCCCcchhHHHHHHHHHHhc-CCCeEEEEEEeccHHHHHHhcc-C-CCccEEEEecCCCC
Q 030535 102 HNTDKGYVDAKSVIAALKSK-GVSAIGAAGFCWGGVVAAKLAS-S-HDIQAAVVLHPGAI 158 (175)
Q Consensus 102 ~~~~~~~~d~~~~~~~l~~~-~~~~i~v~G~S~GG~ia~~~a~-~-~~v~~~v~~~p~~~ 158 (175)
.+|+...++++++. +..++.++||||||.+++.+|. . ++++++|+++|...
T Consensus 80 ------~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~ 133 (276)
T PHA02857 80 ------VRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVN 133 (276)
T ss_pred ------HHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccc
Confidence 26777777777654 3458999999999999999884 3 46999999998653
No 10
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.66 E-value=2.4e-15 Score=121.70 Aligned_cols=123 Identities=19% Similarity=0.165 Sum_probs=85.0
Q ss_pred eeCCeeEEE--EccCCCCCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhc
Q 030535 26 QLGGLNTYV--TGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIH 102 (175)
Q Consensus 26 ~~~~~~~~~--~~p~~~~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~ 102 (175)
..++++.+. +.|....+++.|||+||+.+.....+..+++.|+++||+|+++|++ +|.+. .+.....++..+
T Consensus 68 ~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~-~~~~~~~~~~~~---- 142 (349)
T PLN02385 68 NSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSE-GLHGYIPSFDDL---- 142 (349)
T ss_pred cCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCC-CCCCCcCCHHHH----
Confidence 446666433 3233334568899999765543234688999999999999999999 78654 221111123223
Q ss_pred CCCcchhHHHHHHHHHHhc---CCCeEEEEEEeccHHHHHHhccC--CCccEEEEecCCCC
Q 030535 103 NTDKGYVDAKSVIAALKSK---GVSAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPGAI 158 (175)
Q Consensus 103 ~~~~~~~d~~~~~~~l~~~---~~~~i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~~~ 158 (175)
.+|+.+.++.+..+ +..++.++||||||.+++.++.. .+++++|+++|...
T Consensus 143 -----~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~ 198 (349)
T PLN02385 143 -----VDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCK 198 (349)
T ss_pred -----HHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEeccccc
Confidence 37777777777643 23479999999999999998743 47999999998654
No 11
>PRK10749 lysophospholipase L2; Provisional
Probab=99.66 E-value=4.2e-15 Score=119.55 Aligned_cols=127 Identities=11% Similarity=0.031 Sum_probs=89.9
Q ss_pred cceEEEeeCCeeEEEEccCCCCCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCc-----hh
Q 030535 20 GAGTVQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNP-----QF 93 (175)
Q Consensus 20 ~~~~~~~~~~~~~~~~~p~~~~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~-----~~ 93 (175)
....+...++.+.++..-.+..++++||++||. +.+...|..++..|+++||+|+++|++ +|.+. .+... ..
T Consensus 31 ~~~~~~~~~g~~l~~~~~~~~~~~~~vll~HG~-~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~-~~~~~~~~~~~~ 108 (330)
T PRK10749 31 EEAEFTGVDDIPIRFVRFRAPHHDRVVVICPGR-IESYVKYAELAYDLFHLGYDVLIIDHRGQGRSG-RLLDDPHRGHVE 108 (330)
T ss_pred cceEEEcCCCCEEEEEEccCCCCCcEEEEECCc-cchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCC-CCCCCCCcCccc
Confidence 345566777877655421222355789999965 444467889999999999999999999 78654 22110 01
Q ss_pred hHHHHHHhcCCCcchhHHHHHHHHHHhc-CCCeEEEEEEeccHHHHHHhcc-C-CCccEEEEecCCC
Q 030535 94 DREAWRKIHNTDKGYVDAKSVIAALKSK-GVSAIGAAGFCWGGVVAAKLAS-S-HDIQAAVVLHPGA 157 (175)
Q Consensus 94 ~~~~~~~~~~~~~~~~d~~~~~~~l~~~-~~~~i~v~G~S~GG~ia~~~a~-~-~~v~~~v~~~p~~ 157 (175)
++..+ .+|+..+++.+... +..++.++||||||.+++.++. . .+++++|+.+|..
T Consensus 109 ~~~~~---------~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~ 166 (330)
T PRK10749 109 RFNDY---------VDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMF 166 (330)
T ss_pred cHHHH---------HHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchh
Confidence 23333 37888888776544 5679999999999999999774 3 4799999999864
No 12
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.64 E-value=2.1e-15 Score=112.55 Aligned_cols=104 Identities=25% Similarity=0.298 Sum_probs=86.3
Q ss_pred CeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhc
Q 030535 43 KSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK 121 (175)
Q Consensus 43 ~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~ 121 (175)
+.+||++||..|.. ..++.++++|.++||.|.+|.|+ ||.+. -......-.+|+ .|+.+..+.|++.
T Consensus 15 ~~AVLllHGFTGt~-~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~--e~fl~t~~~DW~---------~~v~d~Y~~L~~~ 82 (243)
T COG1647 15 NRAVLLLHGFTGTP-RDVRMLGRYLNENGYTVYAPRYPGHGTLP--EDFLKTTPRDWW---------EDVEDGYRDLKEA 82 (243)
T ss_pred CEEEEEEeccCCCc-HHHHHHHHHHHHCCceEecCCCCCCCCCH--HHHhcCCHHHHH---------HHHHHHHHHHHHc
Confidence 37899999888887 68999999999999999999999 77532 122233446777 8899999999988
Q ss_pred CCCeEEEEEEeccHHHHHHhccCCCccEEEEecCCCC
Q 030535 122 GVSAIGAAGFCWGGVVAAKLASSHDIQAAVVLHPGAI 158 (175)
Q Consensus 122 ~~~~i~v~G~S~GG~ia~~~a~~~~v~~~v~~~p~~~ 158 (175)
+.++|+++|.||||.+++.+|.+-.++++|.+++..-
T Consensus 83 gy~eI~v~GlSmGGv~alkla~~~p~K~iv~m~a~~~ 119 (243)
T COG1647 83 GYDEIAVVGLSMGGVFALKLAYHYPPKKIVPMCAPVN 119 (243)
T ss_pred CCCeEEEEeecchhHHHHHHHhhCCccceeeecCCcc
Confidence 9999999999999999999997655899997776543
No 13
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.64 E-value=8.7e-15 Score=115.39 Aligned_cols=119 Identities=18% Similarity=0.173 Sum_probs=84.4
Q ss_pred eEEEeeCCeeEEEEccCCCCCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCC------chhh
Q 030535 22 GTVQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNN------PQFD 94 (175)
Q Consensus 22 ~~~~~~~~~~~~~~~p~~~~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~------~~~~ 94 (175)
..+.+.++.+.++.. .+.++++|||+||+.+.. ..|..+++.|+.+ |+|+++|++ +|.+. .+.. ...+
T Consensus 10 ~~~~~~~~~~i~y~~--~G~~~~~vlllHG~~~~~-~~w~~~~~~L~~~-~~vi~~DlpG~G~S~-~~~~~~~~~~~~~~ 84 (294)
T PLN02824 10 TRTWRWKGYNIRYQR--AGTSGPALVLVHGFGGNA-DHWRKNTPVLAKS-HRVYAIDLLGYGYSD-KPNPRSAPPNSFYT 84 (294)
T ss_pred CceEEEcCeEEEEEE--cCCCCCeEEEECCCCCCh-hHHHHHHHHHHhC-CeEEEEcCCCCCCCC-CCccccccccccCC
Confidence 446677888876663 222347899999766554 6899999999876 799999999 78655 2221 1122
Q ss_pred HHHHHHhcCCCcchhHHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhccC--CCccEEEEecCCC
Q 030535 95 REAWRKIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPGA 157 (175)
Q Consensus 95 ~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~~ 157 (175)
+.++ .+|+.++++ +.+.+++.++||||||.+++++|.. ++|+++|++++..
T Consensus 85 ~~~~---------a~~l~~~l~---~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~ 137 (294)
T PLN02824 85 FETW---------GEQLNDFCS---DVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISL 137 (294)
T ss_pred HHHH---------HHHHHHHHH---HhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCc
Confidence 3222 244444444 4456799999999999999998854 4899999998765
No 14
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.63 E-value=1.4e-14 Score=113.82 Aligned_cols=116 Identities=26% Similarity=0.307 Sum_probs=87.4
Q ss_pred eeEEEEccCCCCCCeEEEEecCCCCCC---cchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCC
Q 030535 30 LNTYVTGSGPPDSKSAILLISDVFGYE---APLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTD 105 (175)
Q Consensus 30 ~~~~~~~p~~~~~~~~vv~lhg~~g~~---~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~ 105 (175)
+.++++.|... +.++||++||+.+.. ...+..+++.|+++||.|+++|++ +|.+. ... .....+
T Consensus 14 l~g~~~~p~~~-~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~-~~~---~~~~~~------- 81 (274)
T TIGR03100 14 LVGVLHIPGAS-HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSE-GEN---LGFEGI------- 81 (274)
T ss_pred EEEEEEcCCCC-CCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCC-CCC---CCHHHH-------
Confidence 66788865543 456899999876532 234567899999999999999999 77643 111 122223
Q ss_pred cchhHHHHHHHHHHhc--CCCeEEEEEEeccHHHHHHhccC-CCccEEEEecCCCCC
Q 030535 106 KGYVDAKSVIAALKSK--GVSAIGAAGFCWGGVVAAKLASS-HDIQAAVVLHPGAIT 159 (175)
Q Consensus 106 ~~~~d~~~~~~~l~~~--~~~~i~v~G~S~GG~ia~~~a~~-~~v~~~v~~~p~~~~ 159 (175)
.+|+.++++++++. +.++|.++||||||.+++.+|.. ++|+++|+++|....
T Consensus 82 --~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~~~~v~~lil~~p~~~~ 136 (274)
T TIGR03100 82 --DADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPADLRVAGLVLLNPWVRT 136 (274)
T ss_pred --HHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhhCCCccEEEEECCccCC
Confidence 38899999999875 56789999999999999998754 789999999988653
No 15
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.62 E-value=6.8e-15 Score=115.12 Aligned_cols=121 Identities=15% Similarity=0.178 Sum_probs=84.8
Q ss_pred eEEEeeCCeeEEEEccCCCCCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHH
Q 030535 22 GTVQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRK 100 (175)
Q Consensus 22 ~~~~~~~~~~~~~~~p~~~~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~ 100 (175)
+.+.++++.+..+..-..+...++|||+||+.+. ...|..+++.|.+ +|+|+++|++ +|.+. .+. ...++..+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~plvllHG~~~~-~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~-~~~-~~~~~~~~-- 77 (276)
T TIGR02240 4 FRTIDLDGQSIRTAVRPGKEGLTPLLIFNGIGAN-LELVFPFIEALDP-DLEVIAFDVPGVGGSS-TPR-HPYRFPGL-- 77 (276)
T ss_pred EEEeccCCcEEEEEEecCCCCCCcEEEEeCCCcc-hHHHHHHHHHhcc-CceEEEECCCCCCCCC-CCC-CcCcHHHH--
Confidence 3455667777644321222234689999976554 4688899999975 6999999999 88765 232 12223222
Q ss_pred hcCCCcchhHHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhccC--CCccEEEEecCCCC
Q 030535 101 IHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPGAI 158 (175)
Q Consensus 101 ~~~~~~~~~d~~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~~~ 158 (175)
.+|+.++++.+ +.+++.++||||||.+++++|.+ ++|+++|++++...
T Consensus 78 -------~~~~~~~i~~l---~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~ 127 (276)
T TIGR02240 78 -------AKLAARMLDYL---DYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAG 127 (276)
T ss_pred -------HHHHHHHHHHh---CcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCc
Confidence 26666666665 56689999999999999998854 48999999987753
No 16
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.61 E-value=1.4e-14 Score=119.95 Aligned_cols=114 Identities=19% Similarity=0.243 Sum_probs=81.3
Q ss_pred CeeEEEEccCCCCCCeEEEEecCCCCCC-cchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCc
Q 030535 29 GLNTYVTGSGPPDSKSAILLISDVFGYE-APLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDK 106 (175)
Q Consensus 29 ~~~~~~~~p~~~~~~~~vv~lhg~~g~~-~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~ 106 (175)
.+++|+..|...++.|.|| +|||++.. .+.+..+++.|+++||+|+++|++ +|.+. .... ..+.
T Consensus 180 ~l~g~l~~P~~~~~~P~Vl-i~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~-~~~~-~~d~----------- 245 (414)
T PRK05077 180 PITGFLHLPKGDGPFPTVL-VCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSS-KWKL-TQDS----------- 245 (414)
T ss_pred EEEEEEEECCCCCCccEEE-EeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCC-CCCc-cccH-----------
Confidence 3788998776444556555 55565543 356778899999999999999999 67543 1110 0111
Q ss_pred chhHHHHHHHHHHhc---CCCeEEEEEEeccHHHHHHhcc-CC-CccEEEEecCCC
Q 030535 107 GYVDAKSVIAALKSK---GVSAIGAAGFCWGGVVAAKLAS-SH-DIQAAVVLHPGA 157 (175)
Q Consensus 107 ~~~d~~~~~~~l~~~---~~~~i~v~G~S~GG~ia~~~a~-~~-~v~~~v~~~p~~ 157 (175)
......+++++.++ +.++|+++||||||.+++++|. .+ +|+++|++.|..
T Consensus 246 -~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~ 300 (414)
T PRK05077 246 -SLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVV 300 (414)
T ss_pred -HHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCcc
Confidence 12235788888876 5579999999999999999874 44 899999988765
No 17
>PRK10566 esterase; Provisional
Probab=99.60 E-value=3.3e-14 Score=109.39 Aligned_cols=123 Identities=15% Similarity=0.215 Sum_probs=82.4
Q ss_pred CCeeEEEEccCCC--CCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCC
Q 030535 28 GGLNTYVTGSGPP--DSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNT 104 (175)
Q Consensus 28 ~~~~~~~~~p~~~--~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~ 104 (175)
.++..+...|... ++.|.||++||+.+.. ..+..+++.|+++||+|+++|++ +|.+. ..........|... .
T Consensus 10 ~~~~~~~~~p~~~~~~~~p~vv~~HG~~~~~-~~~~~~~~~l~~~G~~v~~~d~~g~G~~~--~~~~~~~~~~~~~~--~ 84 (249)
T PRK10566 10 AGIEVLHAFPAGQRDTPLPTVFFYHGFTSSK-LVYSYFAVALAQAGFRVIMPDAPMHGARF--SGDEARRLNHFWQI--L 84 (249)
T ss_pred cCcceEEEcCCCCCCCCCCEEEEeCCCCccc-chHHHHHHHHHhCCCEEEEecCCcccccC--CCccccchhhHHHH--H
Confidence 4556666555432 3468999999766554 57888999999999999999998 66532 11111111111110 0
Q ss_pred CcchhHHHHHHHHHHhcC---CCeEEEEEEeccHHHHHHhc-cCCCccEEEEecC
Q 030535 105 DKGYVDAKSVIAALKSKG---VSAIGAAGFCWGGVVAAKLA-SSHDIQAAVVLHP 155 (175)
Q Consensus 105 ~~~~~d~~~~~~~l~~~~---~~~i~v~G~S~GG~ia~~~a-~~~~v~~~v~~~p 155 (175)
....+|+.++++++.+++ .++|+++||||||.+++.++ ..+++++.+.+.+
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~ 139 (249)
T PRK10566 85 LQNMQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMG 139 (249)
T ss_pred HHHHHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeC
Confidence 122367788888887763 46899999999999999976 4567777765543
No 18
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.60 E-value=1.9e-14 Score=118.39 Aligned_cols=113 Identities=18% Similarity=0.216 Sum_probs=82.5
Q ss_pred EEccCCCCCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcchhHHH
Q 030535 34 VTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAK 112 (175)
Q Consensus 34 ~~~p~~~~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 112 (175)
.+.|.....++.||++||+.+. ...|..+++.|+++||+|+++|++ +|.+. .......+.. ...+|+.
T Consensus 127 ~~~p~~~~~~~~Vl~lHG~~~~-~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~-~~~~~~~~~~---------~~~~Dl~ 195 (395)
T PLN02652 127 SWAPAAGEMRGILIIIHGLNEH-SGRYLHFAKQLTSCGFGVYAMDWIGHGGSD-GLHGYVPSLD---------YVVEDTE 195 (395)
T ss_pred EecCCCCCCceEEEEECCchHH-HHHHHHHHHHHHHCCCEEEEeCCCCCCCCC-CCCCCCcCHH---------HHHHHHH
Confidence 4434333456789999976554 356889999999999999999999 77654 2211111222 2238899
Q ss_pred HHHHHHHhcC-CCeEEEEEEeccHHHHHHhccCC----CccEEEEecCCC
Q 030535 113 SVIAALKSKG-VSAIGAAGFCWGGVVAAKLASSH----DIQAAVVLHPGA 157 (175)
Q Consensus 113 ~~~~~l~~~~-~~~i~v~G~S~GG~ia~~~a~~~----~v~~~v~~~p~~ 157 (175)
.+++++.... ..++.++||||||.+++.++..+ +++++|+.+|..
T Consensus 196 ~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~~p~~~~~v~glVL~sP~l 245 (395)
T PLN02652 196 AFLEKIRSENPGVPCFLFGHSTGGAVVLKAASYPSIEDKLEGIVLTSPAL 245 (395)
T ss_pred HHHHHHHHhCCCCCEEEEEECHHHHHHHHHHhccCcccccceEEEECccc
Confidence 9999998652 34899999999999999887543 699999999875
No 19
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.59 E-value=6e-14 Score=108.72 Aligned_cols=122 Identities=21% Similarity=0.232 Sum_probs=85.5
Q ss_pred ceEEEeeCCeeEEEEccCCCCCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHH
Q 030535 21 AGTVQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWR 99 (175)
Q Consensus 21 ~~~~~~~~~~~~~~~~p~~~~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~ 99 (175)
.+++.++++++.++.. .+....+.||++||+.+.. ..|..+.+.|++ +|+|+++|++ +|.+. .+.....++..+
T Consensus 7 ~~~~~~~~~~~~~~~~-~g~~~~~~vv~~hG~~~~~-~~~~~~~~~l~~-~~~vi~~D~~G~G~S~-~~~~~~~~~~~~- 81 (278)
T TIGR03056 7 CSRRVTVGPFHWHVQD-MGPTAGPLLLLLHGTGAST-HSWRDLMPPLAR-SFRVVAPDLPGHGFTR-APFRFRFTLPSM- 81 (278)
T ss_pred ccceeeECCEEEEEEe-cCCCCCCeEEEEcCCCCCH-HHHHHHHHHHhh-CcEEEeecCCCCCCCC-CccccCCCHHHH-
Confidence 3567888999977763 2222458899999766554 678899999975 6999999999 77654 222212233222
Q ss_pred HhcCCCcchhHHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhccC--CCccEEEEecCCCC
Q 030535 100 KIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPGAI 158 (175)
Q Consensus 100 ~~~~~~~~~~d~~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~~~ 158 (175)
.+|+.+++ ++.+.+++.++||||||.+++.+|.. .+++++|++++...
T Consensus 82 --------~~~l~~~i---~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~ 131 (278)
T TIGR03056 82 --------AEDLSALC---AAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALM 131 (278)
T ss_pred --------HHHHHHHH---HHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCccc
Confidence 24455444 44456789999999999999998843 36899998887643
No 20
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.59 E-value=2.5e-14 Score=112.33 Aligned_cols=113 Identities=18% Similarity=0.135 Sum_probs=79.3
Q ss_pred CeeEEEEccCCCCCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcc
Q 030535 29 GLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKG 107 (175)
Q Consensus 29 ~~~~~~~~p~~~~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (175)
+-+++.- ++.+++|.|||+||++... ..|..+++.|.++||.|+++|++ +|.+. .......++.
T Consensus 6 ~~~~~~~--~~~~~~p~vvliHG~~~~~-~~w~~~~~~L~~~g~~vi~~dl~g~G~s~-~~~~~~~~~~----------- 70 (273)
T PLN02211 6 GEEVTDM--KPNRQPPHFVLIHGISGGS-WCWYKIRCLMENSGYKVTCIDLKSAGIDQ-SDADSVTTFD----------- 70 (273)
T ss_pred ccccccc--cccCCCCeEEEECCCCCCc-CcHHHHHHHHHhCCCEEEEecccCCCCCC-CCcccCCCHH-----------
Confidence 3444444 2334568899999876654 67899999999899999999999 67543 1111112222
Q ss_pred hhHHHHHHHHHHhcC-CCeEEEEEEeccHHHHHHhccC--CCccEEEEecCCC
Q 030535 108 YVDAKSVIAALKSKG-VSAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPGA 157 (175)
Q Consensus 108 ~~d~~~~~~~l~~~~-~~~i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~~ 157 (175)
+++..+.+++++.+ .+++.++||||||.+++.++.. ++|+++|++.+..
T Consensus 71 -~~~~~l~~~i~~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~ 122 (273)
T PLN02211 71 -EYNKPLIDFLSSLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATM 122 (273)
T ss_pred -HHHHHHHHHHHhcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEecccc
Confidence 33455666666553 4699999999999999998743 4799999987654
No 21
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.59 E-value=5e-14 Score=108.77 Aligned_cols=120 Identities=17% Similarity=0.249 Sum_probs=79.5
Q ss_pred EeeCCeeEEEEccCCCCCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCch--hhHHHHHHh
Q 030535 25 QQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQ--FDREAWRKI 101 (175)
Q Consensus 25 ~~~~~~~~~~~~p~~~~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~--~~~~~~~~~ 101 (175)
++.++.+.++....+..++++||++||+++.....+..+...|.+.||+|+++|++ +|.+. .+.... .++..+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~-~~~~~~~~~~~~~~~-- 83 (288)
T TIGR01250 7 ITVDGGYHLFTKTGGEGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSD-QPDDSDELWTIDYFV-- 83 (288)
T ss_pred ecCCCCeEEEEeccCCCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCC-CCCcccccccHHHHH--
Confidence 34444444444323333467899999987766556677777777679999999999 67654 222111 2222222
Q ss_pred cCCCcchhHHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhccC--CCccEEEEecCCC
Q 030535 102 HNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPGA 157 (175)
Q Consensus 102 ~~~~~~~~d~~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~~ 157 (175)
+|+.++++ +.+..++.++||||||.+++.+|.. .+++++|+..+..
T Consensus 84 -------~~~~~~~~---~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 131 (288)
T TIGR01250 84 -------DELEEVRE---KLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLD 131 (288)
T ss_pred -------HHHHHHHH---HcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccc
Confidence 44444444 4456689999999999999998743 4799999887754
No 22
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.58 E-value=5.5e-14 Score=110.72 Aligned_cols=122 Identities=22% Similarity=0.314 Sum_probs=91.5
Q ss_pred eEEEeeCCeeEEEEccCCCCCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCC-chhhHHHHH
Q 030535 22 GTVQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNN-PQFDREAWR 99 (175)
Q Consensus 22 ~~~~~~~~~~~~~~~p~~~~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~-~~~~~~~~~ 99 (175)
..+.+.++++.++.. .....+|.|+++| |+...+..|+.....|+++||+|+++|++ +|.+. .|.. .++++...
T Consensus 24 hk~~~~~gI~~h~~e-~g~~~gP~illlH-GfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd-~P~~~~~Yt~~~l- 99 (322)
T KOG4178|consen 24 HKFVTYKGIRLHYVE-GGPGDGPIVLLLH-GFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSD-APPHISEYTIDEL- 99 (322)
T ss_pred eeeEEEccEEEEEEe-ecCCCCCEEEEEc-cCCccchhhhhhhhhhhhcceEEEecCCCCCCCCC-CCCCcceeeHHHH-
Confidence 446678888877774 3345779999999 55555578999999999999999999999 88766 3433 34444322
Q ss_pred HhcCCCcchhHHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhcc--CCCccEEEEecCCCC
Q 030535 100 KIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLAS--SHDIQAAVVLHPGAI 158 (175)
Q Consensus 100 ~~~~~~~~~~d~~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a~--~~~v~~~v~~~p~~~ 158 (175)
..|+..+++.+ +.+++.++||+||+.+++.+|. .++|+++|.++....
T Consensus 100 --------~~di~~lld~L---g~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~ 149 (322)
T KOG4178|consen 100 --------VGDIVALLDHL---GLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFP 149 (322)
T ss_pred --------HHHHHHHHHHh---ccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCC
Confidence 25555555544 6789999999999999999884 369999998886655
No 23
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.58 E-value=5.6e-14 Score=110.86 Aligned_cols=116 Identities=14% Similarity=0.202 Sum_probs=83.9
Q ss_pred eEEEeeCCeeEEEEccCCCCCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHH
Q 030535 22 GTVQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRK 100 (175)
Q Consensus 22 ~~~~~~~~~~~~~~~p~~~~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~ 100 (175)
....+.++.+.++.. .. .+++||++||..+.. ..|..+++.|++++ +|+++|++ +|.+. .+. ...+...+.
T Consensus 9 ~~~~~~~g~~i~y~~--~G-~g~~vvllHG~~~~~-~~w~~~~~~L~~~~-~via~D~~G~G~S~-~~~-~~~~~~~~a- 80 (295)
T PRK03592 9 MRRVEVLGSRMAYIE--TG-EGDPIVFLHGNPTSS-YLWRNIIPHLAGLG-RCLAPDLIGMGASD-KPD-IDYTFADHA- 80 (295)
T ss_pred ceEEEECCEEEEEEE--eC-CCCEEEEECCCCCCH-HHHHHHHHHHhhCC-EEEEEcCCCCCCCC-CCC-CCCCHHHHH-
Confidence 445677888876663 22 457899999766554 68899999999875 99999999 78765 232 222333222
Q ss_pred hcCCCcchhHHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhccC--CCccEEEEecCC
Q 030535 101 IHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPG 156 (175)
Q Consensus 101 ~~~~~~~~~d~~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~ 156 (175)
+|+..+++ +.+.+++.++||||||.+++.+|.. ++|+++|++++.
T Consensus 81 --------~dl~~ll~---~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~ 127 (295)
T PRK03592 81 --------RYLDAWFD---ALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAI 127 (295)
T ss_pred --------HHHHHHHH---HhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCC
Confidence 45555554 4466799999999999999998853 589999999974
No 24
>PLN00021 chlorophyllase
Probab=99.57 E-value=1.7e-13 Score=109.58 Aligned_cols=112 Identities=25% Similarity=0.333 Sum_probs=80.6
Q ss_pred CCeeEEEEccCCCCCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcc
Q 030535 28 GGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKG 107 (175)
Q Consensus 28 ~~~~~~~~~p~~~~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (175)
..++..++.|...+..|.||++||+.+.. ..|..++++|+++||.|+++|++.-.+. . ....+
T Consensus 37 ~~~p~~v~~P~~~g~~PvVv~lHG~~~~~-~~y~~l~~~Las~G~~VvapD~~g~~~~---~-~~~~i------------ 99 (313)
T PLN00021 37 PPKPLLVATPSEAGTYPVLLFLHGYLLYN-SFYSQLLQHIASHGFIVVAPQLYTLAGP---D-GTDEI------------ 99 (313)
T ss_pred CCceEEEEeCCCCCCCCEEEEECCCCCCc-ccHHHHHHHHHhCCCEEEEecCCCcCCC---C-chhhH------------
Confidence 45778888777666789999999776654 6789999999999999999998631111 0 01111
Q ss_pred hhHHHHHHHHHHh-----------cCCCeEEEEEEeccHHHHHHhccC-------CCccEEEEecCCC
Q 030535 108 YVDAKSVIAALKS-----------KGVSAIGAAGFCWGGVVAAKLASS-------HDIQAAVVLHPGA 157 (175)
Q Consensus 108 ~~d~~~~~~~l~~-----------~~~~~i~v~G~S~GG~ia~~~a~~-------~~v~~~v~~~p~~ 157 (175)
.|..++++|+.+ .+.++++++||||||.+++.+|.. .+++++|++.|..
T Consensus 100 -~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 100 -KDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred -HHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecccc
Confidence 344555555543 134689999999999999998843 2689999888854
No 25
>PLN02965 Probable pheophorbidase
Probab=99.55 E-value=7e-14 Score=108.24 Aligned_cols=98 Identities=14% Similarity=0.142 Sum_probs=71.2
Q ss_pred EEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcCC
Q 030535 45 AILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGV 123 (175)
Q Consensus 45 ~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~ 123 (175)
.|||+||++... ..|..+++.|+++||+|+++|++ +|.+. .+.....+...+ .+|+.++++ +.+.
T Consensus 5 ~vvllHG~~~~~-~~w~~~~~~L~~~~~~via~Dl~G~G~S~-~~~~~~~~~~~~---------a~dl~~~l~---~l~~ 70 (255)
T PLN02965 5 HFVFVHGASHGA-WCWYKLATLLDAAGFKSTCVDLTGAGISL-TDSNTVSSSDQY---------NRPLFALLS---DLPP 70 (255)
T ss_pred EEEEECCCCCCc-CcHHHHHHHHhhCCceEEEecCCcCCCCC-CCccccCCHHHH---------HHHHHHHHH---hcCC
Confidence 499999776554 67899999998889999999999 78654 121111222222 244555554 4444
Q ss_pred -CeEEEEEEeccHHHHHHhccC--CCccEEEEecCC
Q 030535 124 -SAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPG 156 (175)
Q Consensus 124 -~~i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~ 156 (175)
.++.++||||||.+++.+|.. ++|+++|++++.
T Consensus 71 ~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~ 106 (255)
T PLN02965 71 DHKVILVGHSIGGGSVTEALCKFTDKISMAIYVAAA 106 (255)
T ss_pred CCCEEEEecCcchHHHHHHHHhCchheeEEEEEccc
Confidence 499999999999999998854 589999988875
No 26
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.55 E-value=1.2e-13 Score=107.80 Aligned_cols=102 Identities=16% Similarity=0.211 Sum_probs=68.4
Q ss_pred CCeEEEEecCCCCCCcchHH---HHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHH
Q 030535 42 SKSAILLISDVFGYEAPLFR---KLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAA 117 (175)
Q Consensus 42 ~~~~vv~lhg~~g~~~~~~~---~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 117 (175)
..|.||++||+.+.. ..|. .....|++.||+|+++|++ +|.+. .+....... . ..++.+.++
T Consensus 29 ~~~~ivllHG~~~~~-~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~-~~~~~~~~~--~----------~~~~~l~~~ 94 (282)
T TIGR03343 29 NGEAVIMLHGGGPGA-GGWSNYYRNIGPFVDAGYRVILKDSPGFNKSD-AVVMDEQRG--L----------VNARAVKGL 94 (282)
T ss_pred CCCeEEEECCCCCch-hhHHHHHHHHHHHHhCCCEEEEECCCCCCCCC-CCcCccccc--c----------hhHHHHHHH
Confidence 457899999765432 3343 3355677789999999999 77654 221100000 0 123334445
Q ss_pred HHhcCCCeEEEEEEeccHHHHHHhccC--CCccEEEEecCCC
Q 030535 118 LKSKGVSAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPGA 157 (175)
Q Consensus 118 l~~~~~~~i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~~ 157 (175)
++..+.+++.++||||||.+++++|.. ++++++|+++|..
T Consensus 95 l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 136 (282)
T TIGR03343 95 MDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGG 136 (282)
T ss_pred HHHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCC
Confidence 555577899999999999999998853 4899999998764
No 27
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.54 E-value=1.6e-13 Score=111.68 Aligned_cols=100 Identities=18% Similarity=0.214 Sum_probs=72.5
Q ss_pred CeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhc
Q 030535 43 KSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK 121 (175)
Q Consensus 43 ~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~ 121 (175)
.|+|||+||+.+. ...|..+++.|++ +|+|+++|++ +|.+. .+.....++..+. +|+.+ ++++.
T Consensus 88 gp~lvllHG~~~~-~~~w~~~~~~L~~-~~~via~Dl~G~G~S~-~~~~~~~~~~~~a---------~~l~~---~l~~l 152 (360)
T PLN02679 88 GPPVLLVHGFGAS-IPHWRRNIGVLAK-NYTVYAIDLLGFGASD-KPPGFSYTMETWA---------ELILD---FLEEV 152 (360)
T ss_pred CCeEEEECCCCCC-HHHHHHHHHHHhc-CCEEEEECCCCCCCCC-CCCCccccHHHHH---------HHHHH---HHHHh
Confidence 4789999976555 4678889999976 7999999999 88765 2322223333332 44444 44455
Q ss_pred CCCeEEEEEEeccHHHHHHhcc--C-CCccEEEEecCCC
Q 030535 122 GVSAIGAAGFCWGGVVAAKLAS--S-HDIQAAVVLHPGA 157 (175)
Q Consensus 122 ~~~~i~v~G~S~GG~ia~~~a~--~-~~v~~~v~~~p~~ 157 (175)
+.+++.++||||||.+++.++. . ++|+++|++++..
T Consensus 153 ~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~ 191 (360)
T PLN02679 153 VQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAG 191 (360)
T ss_pred cCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCcc
Confidence 6679999999999999998763 2 4899999998764
No 28
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.53 E-value=2.1e-13 Score=104.86 Aligned_cols=102 Identities=20% Similarity=0.223 Sum_probs=74.7
Q ss_pred CCCCCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHH
Q 030535 38 GPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIA 116 (175)
Q Consensus 38 ~~~~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 116 (175)
....++|+||++||+.+.. ..|..+++.|++ +|+|+++|++ +|.+. .+. ..+..++ .+|+.++++
T Consensus 11 ~~~~~~~~iv~lhG~~~~~-~~~~~~~~~l~~-~~~vi~~D~~G~G~s~-~~~--~~~~~~~---------~~d~~~~l~ 76 (255)
T PRK10673 11 QNPHNNSPIVLVHGLFGSL-DNLGVLARDLVN-DHDIIQVDMRNHGLSP-RDP--VMNYPAM---------AQDLLDTLD 76 (255)
T ss_pred CCCCCCCCEEEECCCCCch-hHHHHHHHHHhh-CCeEEEECCCCCCCCC-CCC--CCCHHHH---------HHHHHHHHH
Confidence 3334678899999876664 678889999975 6999999999 77654 222 1223322 266666666
Q ss_pred HHHhcCCCeEEEEEEeccHHHHHHhccC--CCccEEEEecCC
Q 030535 117 ALKSKGVSAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPG 156 (175)
Q Consensus 117 ~l~~~~~~~i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~ 156 (175)
.+ +.+++.++||||||.+++++|.. ++|+++|++.+.
T Consensus 77 ~l---~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~ 115 (255)
T PRK10673 77 AL---QIEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIA 115 (255)
T ss_pred Hc---CCCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecC
Confidence 54 55689999999999999998744 479999988654
No 29
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.52 E-value=4.6e-13 Score=105.66 Aligned_cols=119 Identities=15% Similarity=0.192 Sum_probs=80.9
Q ss_pred ceEEEeeCCeeEEEEccCCCCCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHH
Q 030535 21 AGTVQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWR 99 (175)
Q Consensus 21 ~~~~~~~~~~~~~~~~p~~~~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~ 99 (175)
...+.++++.+.++. ..+ .+++|||+||+... ...|..+++.|.+ +|+|+++|++ +|.+. .+.....+...+.
T Consensus 15 ~~~~~~~~~~~i~y~--~~G-~~~~iv~lHG~~~~-~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~-~~~~~~~~~~~~~ 88 (286)
T PRK03204 15 ESRWFDSSRGRIHYI--DEG-TGPPILLCHGNPTW-SFLYRDIIVALRD-RFRCVAPDYLGFGLSE-RPSGFGYQIDEHA 88 (286)
T ss_pred cceEEEcCCcEEEEE--ECC-CCCEEEEECCCCcc-HHHHHHHHHHHhC-CcEEEEECCCCCCCCC-CCCccccCHHHHH
Confidence 355677787776655 222 35789999976544 3568889998875 5999999999 77654 2322122221111
Q ss_pred HhcCCCcchhHHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhccC--CCccEEEEecCCC
Q 030535 100 KIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPGA 157 (175)
Q Consensus 100 ~~~~~~~~~~d~~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~~ 157 (175)
+++..+++ +.+.+++.++||||||.+++.++.. ++|+++|++++..
T Consensus 89 ---------~~~~~~~~---~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~ 136 (286)
T PRK03204 89 ---------RVIGEFVD---HLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWF 136 (286)
T ss_pred ---------HHHHHHHH---HhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccc
Confidence 33333333 3466789999999999999998853 5899999887654
No 30
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.52 E-value=9.9e-14 Score=97.88 Aligned_cols=103 Identities=26% Similarity=0.341 Sum_probs=76.3
Q ss_pred EEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHh--c
Q 030535 45 AILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKS--K 121 (175)
Q Consensus 45 ~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~--~ 121 (175)
+||++||+.+.. ..+..+++.|+++||.|+.+|++ .+... . ..++..+++.+.+ .
T Consensus 1 ~vv~~HG~~~~~-~~~~~~~~~l~~~G~~v~~~~~~~~~~~~------~---------------~~~~~~~~~~~~~~~~ 58 (145)
T PF12695_consen 1 VVVLLHGWGGSR-RDYQPLAEALAEQGYAVVAFDYPGHGDSD------G---------------ADAVERVLADIRAGYP 58 (145)
T ss_dssp EEEEECTTTTTT-HHHHHHHHHHHHTTEEEEEESCTTSTTSH------H---------------SHHHHHHHHHHHHHHC
T ss_pred CEEEECCCCCCH-HHHHHHHHHHHHCCCEEEEEecCCCCccc------h---------------hHHHHHHHHHHHhhcC
Confidence 489999776654 67899999999999999999987 33321 0 0356666666522 2
Q ss_pred CCCeEEEEEEeccHHHHHHhcc-CCCccEEEEecCCCCCcccccccCccc
Q 030535 122 GVSAIGAAGFCWGGVVAAKLAS-SHDIQAAVVLHPGAITVDDINGKFETS 170 (175)
Q Consensus 122 ~~~~i~v~G~S~GG~ia~~~a~-~~~v~~~v~~~p~~~~~~~~~~~~~p~ 170 (175)
+.++|+++|||+||.+++.++. +++++++|+++|. ...+++.....|+
T Consensus 59 ~~~~i~l~G~S~Gg~~a~~~~~~~~~v~~~v~~~~~-~~~~~~~~~~~pv 107 (145)
T PF12695_consen 59 DPDRIILIGHSMGGAIAANLAARNPRVKAVVLLSPY-PDSEDLAKIRIPV 107 (145)
T ss_dssp TCCEEEEEEETHHHHHHHHHHHHSTTESEEEEESES-SGCHHHTTTTSEE
T ss_pred CCCcEEEEEEccCcHHHHHHhhhccceeEEEEecCc-cchhhhhccCCcE
Confidence 6789999999999999999774 4899999999993 2244455554443
No 31
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.50 E-value=2.7e-13 Score=103.25 Aligned_cols=102 Identities=17% Similarity=0.225 Sum_probs=72.1
Q ss_pred CCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHH
Q 030535 41 DSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALK 119 (175)
Q Consensus 41 ~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 119 (175)
.+.|.||++||+.+.. ..|..+++.|.+ +|+|+++|++ +|.+. .......+..++. +|+.++++
T Consensus 11 ~~~~~iv~lhG~~~~~-~~~~~~~~~l~~-~~~vi~~D~~G~G~S~-~~~~~~~~~~~~~---------~~~~~~i~--- 75 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSG-SYWAPQLDVLTQ-RFHVVTYDHRGTGRSP-GELPPGYSIAHMA---------DDVLQLLD--- 75 (257)
T ss_pred CCCCEEEEEcCCCcch-hHHHHHHHHHHh-ccEEEEEcCCCCCCCC-CCCcccCCHHHHH---------HHHHHHHH---
Confidence 3567899999776654 678888888864 7999999999 77654 2222222333222 44544444
Q ss_pred hcCCCeEEEEEEeccHHHHHHhccC--CCccEEEEecCCC
Q 030535 120 SKGVSAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPGA 157 (175)
Q Consensus 120 ~~~~~~i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~~ 157 (175)
..+..++.++||||||.+++.++.. ++++++|++++..
T Consensus 76 ~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~ 115 (257)
T TIGR03611 76 ALNIERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWS 115 (257)
T ss_pred HhCCCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCC
Confidence 4456789999999999999998743 3799999888754
No 32
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.50 E-value=1.6e-13 Score=101.90 Aligned_cols=99 Identities=22% Similarity=0.346 Sum_probs=72.7
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCC-chhhHHHHHHhcCCCcchhHHHHHHHHHHhcCC
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNN-PQFDREAWRKIHNTDKGYVDAKSVIAALKSKGV 123 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~ 123 (175)
|||+||+.+.. ..|..+++.|+ +||+|+++|++ +|.+. .+.. ...+.. +++..+.+++++.+.
T Consensus 1 vv~~hG~~~~~-~~~~~~~~~l~-~~~~v~~~d~~G~G~s~-~~~~~~~~~~~------------~~~~~l~~~l~~~~~ 65 (228)
T PF12697_consen 1 VVFLHGFGGSS-ESWDPLAEALA-RGYRVIAFDLPGHGRSD-PPPDYSPYSIE------------DYAEDLAELLDALGI 65 (228)
T ss_dssp EEEE-STTTTG-GGGHHHHHHHH-TTSEEEEEECTTSTTSS-SHSSGSGGSHH------------HHHHHHHHHHHHTTT
T ss_pred eEEECCCCCCH-HHHHHHHHHHh-CCCEEEEEecCCccccc-cccccCCcchh------------hhhhhhhhccccccc
Confidence 78999766654 78899999995 79999999999 77654 2221 122222 334555555656566
Q ss_pred CeEEEEEEeccHHHHHHhcc-C-CCccEEEEecCCCCC
Q 030535 124 SAIGAAGFCWGGVVAAKLAS-S-HDIQAAVVLHPGAIT 159 (175)
Q Consensus 124 ~~i~v~G~S~GG~ia~~~a~-~-~~v~~~v~~~p~~~~ 159 (175)
+++.++|||+||.+++.++. . ++|+++|+++|....
T Consensus 66 ~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 103 (228)
T PF12697_consen 66 KKVILVGHSMGGMIALRLAARYPDRVKGLVLLSPPPPL 103 (228)
T ss_dssp SSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSSH
T ss_pred ccccccccccccccccccccccccccccceeecccccc
Confidence 79999999999999999885 3 489999999988753
No 33
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.50 E-value=2.9e-13 Score=103.41 Aligned_cols=97 Identities=11% Similarity=0.144 Sum_probs=71.0
Q ss_pred CeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhc
Q 030535 43 KSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK 121 (175)
Q Consensus 43 ~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~ 121 (175)
+|.|||+||+.+.. ..|..+++.| + +|+|+++|++ +|.+. .+.. .++. ..++.+.+.+++.
T Consensus 2 ~p~vvllHG~~~~~-~~w~~~~~~l-~-~~~vi~~D~~G~G~S~-~~~~--~~~~------------~~~~~l~~~l~~~ 63 (242)
T PRK11126 2 LPWLVFLHGLLGSG-QDWQPVGEAL-P-DYPRLYIDLPGHGGSA-AISV--DGFA------------DVSRLLSQTLQSY 63 (242)
T ss_pred CCEEEEECCCCCCh-HHHHHHHHHc-C-CCCEEEecCCCCCCCC-Cccc--cCHH------------HHHHHHHHHHHHc
Confidence 46799999776655 6889999988 3 6999999999 78655 2221 1222 2244455555566
Q ss_pred CCCeEEEEEEeccHHHHHHhccC--C-CccEEEEecCCC
Q 030535 122 GVSAIGAAGFCWGGVVAAKLASS--H-DIQAAVVLHPGA 157 (175)
Q Consensus 122 ~~~~i~v~G~S~GG~ia~~~a~~--~-~v~~~v~~~p~~ 157 (175)
+.+++.++||||||.+++.+|.. + +|+++++.++..
T Consensus 64 ~~~~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~ 102 (242)
T PRK11126 64 NILPYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGNP 102 (242)
T ss_pred CCCCeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCCC
Confidence 77899999999999999998743 4 499999887654
No 34
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.47 E-value=6.6e-13 Score=99.93 Aligned_cols=99 Identities=18% Similarity=0.326 Sum_probs=69.5
Q ss_pred eEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCC-chhhHHHHHHhcCCCcchhHHHHHHHHH-Hh
Q 030535 44 SAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNN-PQFDREAWRKIHNTDKGYVDAKSVIAAL-KS 120 (175)
Q Consensus 44 ~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~l-~~ 120 (175)
|+||++||+.+.. ..|..+++.|+ +||.|+++|++ +|.+. .+.. ...+.. +.+..+++.+ +.
T Consensus 2 ~~vv~~hG~~~~~-~~~~~~~~~L~-~~~~v~~~d~~g~G~s~-~~~~~~~~~~~------------~~~~~~~~~~~~~ 66 (251)
T TIGR03695 2 PVLVFLHGFLGSG-ADWQALIELLG-PHFRCLAIDLPGHGSSQ-SPDEIERYDFE------------EAAQDILATLLDQ 66 (251)
T ss_pred CEEEEEcCCCCch-hhHHHHHHHhc-ccCeEEEEcCCCCCCCC-CCCccChhhHH------------HHHHHHHHHHHHH
Confidence 6799999776654 67899999998 79999999998 67654 2221 111111 2222323222 33
Q ss_pred cCCCeEEEEEEeccHHHHHHhccC--CCccEEEEecCCC
Q 030535 121 KGVSAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPGA 157 (175)
Q Consensus 121 ~~~~~i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~~ 157 (175)
.+.+++.++||||||.+++.+|.. ..+++++++++..
T Consensus 67 ~~~~~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~ 105 (251)
T TIGR03695 67 LGIEPFFLVGYSMGGRIALYYALQYPERVQGLILESGSP 105 (251)
T ss_pred cCCCeEEEEEeccHHHHHHHHHHhCchheeeeEEecCCC
Confidence 356799999999999999998854 3689999888754
No 35
>PRK10985 putative hydrolase; Provisional
Probab=99.47 E-value=7.2e-13 Score=106.35 Aligned_cols=106 Identities=21% Similarity=0.275 Sum_probs=75.6
Q ss_pred CCeEEEEecCCCCCCc-chHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHH
Q 030535 42 SKSAILLISDVFGYEA-PLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALK 119 (175)
Q Consensus 42 ~~~~vv~lhg~~g~~~-~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 119 (175)
..|.||++||..+... ..+..+++.|+++||+|+++|++ +|... ....... .....+|+..++++++
T Consensus 57 ~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~-~~~~~~~----------~~~~~~D~~~~i~~l~ 125 (324)
T PRK10985 57 HKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEP-NRLHRIY----------HSGETEDARFFLRWLQ 125 (324)
T ss_pred CCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCc-cCCcceE----------CCCchHHHHHHHHHHH
Confidence 5689999998776532 34667999999999999999998 55322 0100000 0112388999999998
Q ss_pred hc-CCCeEEEEEEeccHHHHHHhc-cC-C--CccEEEEecCCCC
Q 030535 120 SK-GVSAIGAAGFCWGGVVAAKLA-SS-H--DIQAAVVLHPGAI 158 (175)
Q Consensus 120 ~~-~~~~i~v~G~S~GG~ia~~~a-~~-~--~v~~~v~~~p~~~ 158 (175)
++ +..++.++||||||.+++.++ .. + +++++|++++...
T Consensus 126 ~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~ 169 (324)
T PRK10985 126 REFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLM 169 (324)
T ss_pred HhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCC
Confidence 75 567899999999999888755 32 2 4888888887654
No 36
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.47 E-value=2.4e-12 Score=100.38 Aligned_cols=131 Identities=18% Similarity=0.165 Sum_probs=90.0
Q ss_pred EEeeCCeeEEE--EccCCC-CCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHH
Q 030535 24 VQQLGGLNTYV--TGSGPP-DSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWR 99 (175)
Q Consensus 24 ~~~~~~~~~~~--~~p~~~-~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~ 99 (175)
++...+...+. +.|... .++..|+++||..+.....+..+|.+|+..||.|+++|+. +|.+. .... +
T Consensus 32 ~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~Sd-Gl~~-------y- 102 (313)
T KOG1455|consen 32 FTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSD-GLHA-------Y- 102 (313)
T ss_pred EEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCC-CCcc-------c-
Confidence 34445544333 333332 4556677788554443357889999999999999999998 77654 2221 1
Q ss_pred HhcCCCcchhHHHHHHHHHHhcC---CCeEEEEEEeccHHHHHHhcc-CC-CccEEEEecCCCCCccccc
Q 030535 100 KIHNTDKGYVDAKSVIAALKSKG---VSAIGAAGFCWGGVVAAKLAS-SH-DIQAAVVLHPGAITVDDIN 164 (175)
Q Consensus 100 ~~~~~~~~~~d~~~~~~~l~~~~---~~~i~v~G~S~GG~ia~~~a~-~~-~v~~~v~~~p~~~~~~~~~ 164 (175)
..+++..++|+...++.++.+. ..+.+++||||||.+++.++. ++ -.+++|+++|.....++.+
T Consensus 103 -i~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~k 171 (313)
T KOG1455|consen 103 -VPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTK 171 (313)
T ss_pred -CCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccC
Confidence 1233444577877777766652 347999999999999999885 44 5899999999988766553
No 37
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.46 E-value=4.8e-13 Score=103.35 Aligned_cols=93 Identities=17% Similarity=0.279 Sum_probs=66.9
Q ss_pred eEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcC
Q 030535 44 SAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKG 122 (175)
Q Consensus 44 ~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~ 122 (175)
|+|||+||+.+ +...|..+++.|.++ |+|+++|++ +|.+. ... ..++ ...++.+.+..
T Consensus 14 ~~ivllHG~~~-~~~~w~~~~~~L~~~-~~vi~~Dl~G~G~S~-~~~--~~~~----------------~~~~~~l~~~~ 72 (256)
T PRK10349 14 VHLVLLHGWGL-NAEVWRCIDEELSSH-FTLHLVDLPGFGRSR-GFG--ALSL----------------ADMAEAVLQQA 72 (256)
T ss_pred CeEEEECCCCC-ChhHHHHHHHHHhcC-CEEEEecCCCCCCCC-CCC--CCCH----------------HHHHHHHHhcC
Confidence 46999997544 447889999999765 999999999 77654 111 1111 11222233345
Q ss_pred CCeEEEEEEeccHHHHHHhccC--CCccEEEEecCCC
Q 030535 123 VSAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPGA 157 (175)
Q Consensus 123 ~~~i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~~ 157 (175)
.+++.++||||||.+++.+|.. .+|+++|++.+..
T Consensus 73 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~ 109 (256)
T PRK10349 73 PDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSP 109 (256)
T ss_pred CCCeEEEEECHHHHHHHHHHHhChHhhheEEEecCcc
Confidence 6789999999999999998854 4899999988753
No 38
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.45 E-value=3.1e-12 Score=104.95 Aligned_cols=130 Identities=16% Similarity=0.203 Sum_probs=89.2
Q ss_pred CCCCCCccceEEE--eeCCeeEEEEccCCCCCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCC
Q 030535 13 LSPGSGCGAGTVQ--QLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLN 89 (175)
Q Consensus 13 ~~~~~~~~~~~~~--~~~~~~~~~~~p~~~~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~ 89 (175)
..|-+|.+.|.-. ..++++..+.. .++..+++|||+||+.+. ...|+.+++.|++ +|+|+++|++ +|.+. .+.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~y~~-~G~~~~~~ivllHG~~~~-~~~w~~~~~~L~~-~~~Via~DlpG~G~S~-~p~ 171 (383)
T PLN03084 96 KDPIFGLKMGAQSQASSDLFRWFCVE-SGSNNNPPVLLIHGFPSQ-AYSYRKVLPVLSK-NYHAIAFDWLGFGFSD-KPQ 171 (383)
T ss_pred cCccccccccceeEEcCCceEEEEEe-cCCCCCCeEEEECCCCCC-HHHHHHHHHHHhc-CCEEEEECCCCCCCCC-CCc
Confidence 3566666665433 34667754442 333346789999966554 4678999999975 7999999999 88655 232
Q ss_pred C---chhhHHHHHHhcCCCcchhHHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhccC--CCccEEEEecCCCC
Q 030535 90 N---PQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPGAI 158 (175)
Q Consensus 90 ~---~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~~~ 158 (175)
. ...++..+. +|+..+++.+ +.+++.++||||||.+++.+|.. ++|+++|+++|...
T Consensus 172 ~~~~~~ys~~~~a---------~~l~~~i~~l---~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~ 233 (383)
T PLN03084 172 PGYGFNYTLDEYV---------SSLESLIDEL---KSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLT 233 (383)
T ss_pred ccccccCCHHHHH---------HHHHHHHHHh---CCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCc
Confidence 1 122333332 5555555544 56789999999999999998854 48999999998753
No 39
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.45 E-value=2.6e-12 Score=106.08 Aligned_cols=108 Identities=21% Similarity=0.245 Sum_probs=73.8
Q ss_pred CCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHH
Q 030535 41 DSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALK 119 (175)
Q Consensus 41 ~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 119 (175)
..+|+||++||+.+. ...|...++.|++ +|+|+++|++ +|.+. .+.....+...... .-++.+.++++
T Consensus 103 ~~~p~vvllHG~~~~-~~~~~~~~~~L~~-~~~vi~~D~rG~G~S~-~~~~~~~~~~~~~~--------~~~~~i~~~~~ 171 (402)
T PLN02894 103 EDAPTLVMVHGYGAS-QGFFFRNFDALAS-RFRVIAIDQLGWGGSS-RPDFTCKSTEETEA--------WFIDSFEEWRK 171 (402)
T ss_pred CCCCEEEEECCCCcc-hhHHHHHHHHHHh-CCEEEEECCCCCCCCC-CCCcccccHHHHHH--------HHHHHHHHHHH
Confidence 356889999976544 3567777888876 5999999999 77654 23211111110000 11334455666
Q ss_pred hcCCCeEEEEEEeccHHHHHHhccC--CCccEEEEecCCCCC
Q 030535 120 SKGVSAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPGAIT 159 (175)
Q Consensus 120 ~~~~~~i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~~~~ 159 (175)
+.+..++.++||||||.+++.+|.. .+++++|+++|....
T Consensus 172 ~l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~ 213 (402)
T PLN02894 172 AKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFS 213 (402)
T ss_pred HcCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCcccc
Confidence 6677799999999999999998854 479999999887653
No 40
>PLN02511 hydrolase
Probab=99.44 E-value=1.1e-12 Score=107.96 Aligned_cols=106 Identities=16% Similarity=0.193 Sum_probs=76.5
Q ss_pred CCCeEEEEecCCCCCCcc-hHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHH
Q 030535 41 DSKSAILLISDVFGYEAP-LFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAAL 118 (175)
Q Consensus 41 ~~~~~vv~lhg~~g~~~~-~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l 118 (175)
...|.||++||+.|.... ++..++..+.++||+|+++|++ +|.+. .... . .......+|+..+++++
T Consensus 98 ~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~-~~~~-~---------~~~~~~~~Dl~~~i~~l 166 (388)
T PLN02511 98 ADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSP-VTTP-Q---------FYSASFTGDLRQVVDHV 166 (388)
T ss_pred CCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCC-CCCc-C---------EEcCCchHHHHHHHHHH
Confidence 356889999988775433 4566888888899999999999 67543 1111 0 01123348999999999
Q ss_pred Hhc-CCCeEEEEEEeccHHHHHHhccC--CC--ccEEEEecCCC
Q 030535 119 KSK-GVSAIGAAGFCWGGVVAAKLASS--HD--IQAAVVLHPGA 157 (175)
Q Consensus 119 ~~~-~~~~i~v~G~S~GG~ia~~~a~~--~~--v~~~v~~~p~~ 157 (175)
+.+ +..++.++||||||.+++.++.. ++ |++++++++..
T Consensus 167 ~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~ 210 (388)
T PLN02511 167 AGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPF 210 (388)
T ss_pred HHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCc
Confidence 876 33589999999999999997743 23 78888776554
No 41
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.44 E-value=7.4e-13 Score=99.97 Aligned_cols=100 Identities=18% Similarity=0.283 Sum_probs=69.6
Q ss_pred CCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHh
Q 030535 42 SKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKS 120 (175)
Q Consensus 42 ~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~ 120 (175)
.+|.+|++||. +.+...|..+++.|. +||+|+++|++ +|.+. ......+..++. +|+..+++.
T Consensus 12 ~~~~li~~hg~-~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~--~~~~~~~~~~~~---------~~~~~~i~~--- 75 (251)
T TIGR02427 12 GAPVLVFINSL-GTDLRMWDPVLPALT-PDFRVLRYDKRGHGLSD--APEGPYSIEDLA---------DDVLALLDH--- 75 (251)
T ss_pred CCCeEEEEcCc-ccchhhHHHHHHHhh-cccEEEEecCCCCCCCC--CCCCCCCHHHHH---------HHHHHHHHH---
Confidence 45778888854 544467888999886 58999999999 77653 221222232222 445554444
Q ss_pred cCCCeEEEEEEeccHHHHHHhccC--CCccEEEEecCCC
Q 030535 121 KGVSAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPGA 157 (175)
Q Consensus 121 ~~~~~i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~~ 157 (175)
.+.+++.++||||||.+++.+|.. +++++++++++..
T Consensus 76 ~~~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 114 (251)
T TIGR02427 76 LGIERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAA 114 (251)
T ss_pred hCCCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCcc
Confidence 355689999999999999998743 4788888877653
No 42
>PLN02578 hydrolase
Probab=99.44 E-value=2.6e-12 Score=104.35 Aligned_cols=115 Identities=18% Similarity=0.154 Sum_probs=78.1
Q ss_pred EEeeCCeeEEEEccCCCCCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhc
Q 030535 24 VQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIH 102 (175)
Q Consensus 24 ~~~~~~~~~~~~~p~~~~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~ 102 (175)
+....+.+.++.. .+ ++++||++||+.+. ...|..+++.|++ +|+|+++|++ +|.+. .+. ...+...+.
T Consensus 70 ~~~~~~~~i~Y~~--~g-~g~~vvliHG~~~~-~~~w~~~~~~l~~-~~~v~~~D~~G~G~S~-~~~-~~~~~~~~a--- 139 (354)
T PLN02578 70 FWTWRGHKIHYVV--QG-EGLPIVLIHGFGAS-AFHWRYNIPELAK-KYKVYALDLLGFGWSD-KAL-IEYDAMVWR--- 139 (354)
T ss_pred EEEECCEEEEEEE--cC-CCCeEEEECCCCCC-HHHHHHHHHHHhc-CCEEEEECCCCCCCCC-Ccc-cccCHHHHH---
Confidence 3455666665552 22 44679999966554 4678888999975 5999999999 77654 221 122222221
Q ss_pred CCCcchhHHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhccC--CCccEEEEecCCC
Q 030535 103 NTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPGA 157 (175)
Q Consensus 103 ~~~~~~~d~~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~~ 157 (175)
+|+. +++++...+++.++||||||.+++.+|.+ .+++++|++++..
T Consensus 140 ------~~l~---~~i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~ 187 (354)
T PLN02578 140 ------DQVA---DFVKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAG 187 (354)
T ss_pred ------HHHH---HHHHHhccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCc
Confidence 3444 44444445689999999999999998854 4899999988754
No 43
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.44 E-value=2e-12 Score=99.89 Aligned_cols=106 Identities=26% Similarity=0.380 Sum_probs=77.4
Q ss_pred EEEccCCCCCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCCC-CCCCCCCCCchhhHHHHHHhcCCCcchhHH
Q 030535 33 YVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFY-GDPIVDLNNPQFDREAWRKIHNTDKGYVDA 111 (175)
Q Consensus 33 ~~~~p~~~~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 111 (175)
.++.|+..++.|.|||+||. ......|..+.+++|++||.|+.+|++. .... ...+. +++
T Consensus 7 ~v~~P~~~g~yPVv~f~~G~-~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~-----~~~~~-------------~~~ 67 (259)
T PF12740_consen 7 LVYYPSSAGTYPVVLFLHGF-LLINSWYSQLLEHVASHGYIVVAPDLYSIGGPD-----DTDEV-------------ASA 67 (259)
T ss_pred EEEecCCCCCcCEEEEeCCc-CCCHHHHHHHHHHHHhCceEEEEecccccCCCC-----cchhH-------------HHH
Confidence 44555777788999999854 4555779999999999999999999752 2211 01111 445
Q ss_pred HHHHHHHHhc-----------CCCeEEEEEEeccHHHHHHhccC-------CCccEEEEecCCC
Q 030535 112 KSVIAALKSK-----------GVSAIGAAGFCWGGVVAAKLASS-------HDIQAAVVLHPGA 157 (175)
Q Consensus 112 ~~~~~~l~~~-----------~~~~i~v~G~S~GG~ia~~~a~~-------~~v~~~v~~~p~~ 157 (175)
.++++|+.+. |.++++++|||.||-++..++.. .++++++++.|.-
T Consensus 68 ~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 68 AEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred HHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 6666665542 34699999999999999987732 3799999999886
No 44
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.43 E-value=6.9e-12 Score=105.32 Aligned_cols=121 Identities=14% Similarity=0.222 Sum_probs=77.4
Q ss_pred EeeCCeeEEEEccCCC--CCCeEEEEecCCCCCCcchHHH-HHHHHH---hCCCEEEeccCC-CCCCCCCCCCchhhHHH
Q 030535 25 QQLGGLNTYVTGSGPP--DSKSAILLISDVFGYEAPLFRK-LADKVA---GAGFLVVAPDFF-YGDPIVDLNNPQFDREA 97 (175)
Q Consensus 25 ~~~~~~~~~~~~p~~~--~~~~~vv~lhg~~g~~~~~~~~-~a~~la---~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~ 97 (175)
.+.++...|+..-.+. ..+++|||+||+.+.. ..|.. +.+.|+ +++|+|+++|++ +|.+. .+.....++..
T Consensus 181 ~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~-~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~-~p~~~~ytl~~ 258 (481)
T PLN03087 181 LSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSS-AFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSP-KPADSLYTLRE 258 (481)
T ss_pred EeeCCeEEEEEEecCCCCCCCCeEEEECCCCccH-HHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCc-CCCCCcCCHHH
Confidence 3445566655531222 2357899999776554 55653 445555 368999999999 78654 23222223322
Q ss_pred HHHhcCCCcchhHHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhccC--CCccEEEEecCCCC
Q 030535 98 WRKIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPGAI 158 (175)
Q Consensus 98 ~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~~~ 158 (175)
+. +|+. ...++..+.+++.++||||||.+++.+|.. ++|+++|++++...
T Consensus 259 ~a---------~~l~--~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~ 310 (481)
T PLN03087 259 HL---------EMIE--RSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYY 310 (481)
T ss_pred HH---------HHHH--HHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCcc
Confidence 21 3332 123444567899999999999999998743 47999999987543
No 45
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.42 E-value=2.2e-12 Score=103.95 Aligned_cols=91 Identities=16% Similarity=0.170 Sum_probs=63.7
Q ss_pred HHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHh-------------------
Q 030535 61 RKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKS------------------- 120 (175)
Q Consensus 61 ~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~------------------- 120 (175)
..+++.|+++||+|+++|++ +|.+. ........+ ..++..++|+..+++.+++
T Consensus 64 ~~~~~~l~~~G~~V~~~D~rGHG~S~-~~~~~~g~~------~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 136 (332)
T TIGR01607 64 DSWIENFNKNGYSVYGLDLQGHGESD-GLQNLRGHI------NCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVN 136 (332)
T ss_pred HHHHHHHHHCCCcEEEecccccCCCc-cccccccch------hhHHHHHHHHHHHHHHhhhhhccccccccccccccccc
Confidence 46899999999999999999 78654 111111111 1223344788888887764
Q ss_pred c-C-CCeEEEEEEeccHHHHHHhccC----------CCccEEEEecCCCC
Q 030535 121 K-G-VSAIGAAGFCWGGVVAAKLASS----------HDIQAAVVLHPGAI 158 (175)
Q Consensus 121 ~-~-~~~i~v~G~S~GG~ia~~~a~~----------~~v~~~v~~~p~~~ 158 (175)
. . ..++.++||||||.+++.++.. ..++++|+.+|.+.
T Consensus 137 ~~~~~~p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~ 186 (332)
T TIGR01607 137 TKENRLPMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMIS 186 (332)
T ss_pred cccCCCceeEeeccCccHHHHHHHHHhccccccccccccceEEEeccceE
Confidence 1 1 3479999999999999997631 15899998888753
No 46
>PRK06489 hypothetical protein; Provisional
Probab=99.42 E-value=2e-12 Score=105.18 Aligned_cols=117 Identities=16% Similarity=0.213 Sum_probs=74.1
Q ss_pred eeCCeeEEEEccCCCCC-------CeEEEEecCCCCCCcchHH--HHHHHH-------HhCCCEEEeccCC-CCCCCCCC
Q 030535 26 QLGGLNTYVTGSGPPDS-------KSAILLISDVFGYEAPLFR--KLADKV-------AGAGFLVVAPDFF-YGDPIVDL 88 (175)
Q Consensus 26 ~~~~~~~~~~~p~~~~~-------~~~vv~lhg~~g~~~~~~~--~~a~~l-------a~~G~~vi~~D~~-~g~~~~~~ 88 (175)
..++++.++.. .++.. .|+|||+||+.+.. ..|. .+.+.| .+++|+|+++|++ +|.+. .+
T Consensus 46 ~~~g~~i~y~~-~G~~~~~~~~~~gpplvllHG~~~~~-~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~-~p 122 (360)
T PRK06489 46 TLPELRLHYTT-LGTPHRNADGEIDNAVLVLHGTGGSG-KSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSS-KP 122 (360)
T ss_pred CcCCceEEEEe-cCCCCcccccCCCCeEEEeCCCCCch-hhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCC-CC
Confidence 35667766652 22222 57899999877654 3343 455544 2467999999999 78654 23
Q ss_pred CCc------hhhHHHHHHhcCCCcchhHHHHHHHHH-HhcCCCeEE-EEEEeccHHHHHHhccC--CCccEEEEecCCC
Q 030535 89 NNP------QFDREAWRKIHNTDKGYVDAKSVIAAL-KSKGVSAIG-AAGFCWGGVVAAKLASS--HDIQAAVVLHPGA 157 (175)
Q Consensus 89 ~~~------~~~~~~~~~~~~~~~~~~d~~~~~~~l-~~~~~~~i~-v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~~ 157 (175)
... ..++. +.++.++..+ .+.+.+++. ++||||||.+++.+|.. ++|+++|++++..
T Consensus 123 ~~~~~~~~~~~~~~------------~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~ 189 (360)
T PRK06489 123 SDGLRAAFPRYDYD------------DMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQP 189 (360)
T ss_pred CcCCCCCCCcccHH------------HHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCc
Confidence 211 11111 1123344444 335677875 89999999999998853 4899999887653
No 47
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.42 E-value=6.2e-13 Score=107.46 Aligned_cols=114 Identities=17% Similarity=0.247 Sum_probs=73.5
Q ss_pred eeCCeeEEEEccCCCCCCeEEEEecCCCCCCcc-----------hHHHHHH---HHHhCCCEEEeccCC-CCCCCCCCCC
Q 030535 26 QLGGLNTYVTGSGPPDSKSAILLISDVFGYEAP-----------LFRKLAD---KVAGAGFLVVAPDFF-YGDPIVDLNN 90 (175)
Q Consensus 26 ~~~~~~~~~~~p~~~~~~~~vv~lhg~~g~~~~-----------~~~~~a~---~la~~G~~vi~~D~~-~g~~~~~~~~ 90 (175)
+.++++.++.. .+..++++||+||+++.... +|..+.+ .|...+|+|+++|++ +|.+. ..
T Consensus 42 ~~~~~~l~y~~--~G~~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~--~~- 116 (343)
T PRK08775 42 GLEDLRLRYEL--IGPAGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSL--DV- 116 (343)
T ss_pred CCCCceEEEEE--eccCCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCC--CC-
Confidence 44667766552 22223358888878776532 4666664 464457999999999 55432 11
Q ss_pred chhhHHHHHHhcCCCcchhHHHHHHHHHHhcCCCe-EEEEEEeccHHHHHHhccC--CCccEEEEecCCC
Q 030535 91 PQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVSA-IGAAGFCWGGVVAAKLASS--HDIQAAVVLHPGA 157 (175)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~-i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~~ 157 (175)
..++. +.++.+.+++++.+.++ +.++||||||.+++.+|.. .+|+++|++++..
T Consensus 117 -~~~~~------------~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~ 173 (343)
T PRK08775 117 -PIDTA------------DQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAH 173 (343)
T ss_pred -CCCHH------------HHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccc
Confidence 11221 22334444555556666 5799999999999998854 4899999998764
No 48
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.38 E-value=1e-11 Score=100.60 Aligned_cols=117 Identities=21% Similarity=0.224 Sum_probs=77.5
Q ss_pred EeeCCeeEEEEccCCCCCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcC
Q 030535 25 QQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHN 103 (175)
Q Consensus 25 ~~~~~~~~~~~~p~~~~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~ 103 (175)
...++...++.. ...++.++|||+||+.+.. ..|..+++.|.+ +|+|+++|++ +|.+. ... ...+..
T Consensus 114 ~~~~~~~i~~~~-~g~~~~~~vl~~HG~~~~~-~~~~~~~~~l~~-~~~v~~~d~~g~G~s~-~~~-~~~~~~------- 181 (371)
T PRK14875 114 ARIGGRTVRYLR-LGEGDGTPVVLIHGFGGDL-NNWLFNHAALAA-GRPVIALDLPGHGASS-KAV-GAGSLD------- 181 (371)
T ss_pred ceEcCcEEEEec-ccCCCCCeEEEECCCCCcc-chHHHHHHHHhc-CCEEEEEcCCCCCCCC-CCC-CCCCHH-------
Confidence 344444444332 2223467899999665554 678888998876 4999999999 77653 111 111221
Q ss_pred CCcchhHHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhccC--CCccEEEEecCCCC
Q 030535 104 TDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPGAI 158 (175)
Q Consensus 104 ~~~~~~d~~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~~~ 158 (175)
+.+..+.+++.+.+..++.++||||||.+++.+|.. .+++++++++|...
T Consensus 182 -----~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~ 233 (371)
T PRK14875 182 -----ELAAAVLAFLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGL 233 (371)
T ss_pred -----HHHHHHHHHHHhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCc
Confidence 223334444455566799999999999999998753 48999999987643
No 49
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.37 E-value=2.9e-12 Score=96.49 Aligned_cols=93 Identities=19% Similarity=0.284 Sum_probs=66.0
Q ss_pred eEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcC
Q 030535 44 SAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKG 122 (175)
Q Consensus 44 ~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~ 122 (175)
|+||++||+.+ +...|..+++.|++ +|+|+++|++ +|.+. ... .. ++..+++.+.+..
T Consensus 5 ~~iv~~HG~~~-~~~~~~~~~~~l~~-~~~vi~~d~~G~G~s~-~~~--~~----------------~~~~~~~~~~~~~ 63 (245)
T TIGR01738 5 VHLVLIHGWGM-NAEVFRCLDEELSA-HFTLHLVDLPGHGRSR-GFG--PL----------------SLADAAEAIAAQA 63 (245)
T ss_pred ceEEEEcCCCC-chhhHHHHHHhhcc-CeEEEEecCCcCccCC-CCC--Cc----------------CHHHHHHHHHHhC
Confidence 67999997544 44678999999975 6999999998 67643 111 11 1222333333333
Q ss_pred CCeEEEEEEeccHHHHHHhccC--CCccEEEEecCCC
Q 030535 123 VSAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPGA 157 (175)
Q Consensus 123 ~~~i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~~ 157 (175)
.+++.++||||||.+++.+|.. .+++++|++++..
T Consensus 64 ~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~ 100 (245)
T TIGR01738 64 PDPAIWLGWSLGGLVALHIAATHPDRVRALVTVASSP 100 (245)
T ss_pred CCCeEEEEEcHHHHHHHHHHHHCHHhhheeeEecCCc
Confidence 3689999999999999998853 3699999887654
No 50
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.37 E-value=4.7e-12 Score=95.75 Aligned_cols=117 Identities=15% Similarity=0.158 Sum_probs=75.3
Q ss_pred EEEccCC-CCCCeEEEEecCCCCCCcchHH---HHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHh---cCC
Q 030535 33 YVTGSGP-PDSKSAILLISDVFGYEAPLFR---KLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKI---HNT 104 (175)
Q Consensus 33 ~~~~p~~-~~~~~~vv~lhg~~g~~~~~~~---~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~---~~~ 104 (175)
+++.|.. .++.|.||++||+.+.. ..+. .+.+.+.++||.|++||++ ++...... .|... ...
T Consensus 2 ~ly~P~~~~~~~P~vv~lHG~~~~~-~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~--------~~~~~~~~~~~ 72 (212)
T TIGR01840 2 YVYVPAGLTGPRALVLALHGCGQTA-SAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCW--------DWFFTHHRARG 72 (212)
T ss_pred EEEcCCCCCCCCCEEEEeCCCCCCH-HHHhhhcChHHHHHhCCeEEEecCCcCccccCCCC--------CCCCccccCCC
Confidence 4454444 34679999999766543 3333 3566666689999999987 33211000 01000 011
Q ss_pred CcchhHHHHHHHHHHhc---CCCeEEEEEEeccHHHHHHhcc-CC-CccEEEEecCCCC
Q 030535 105 DKGYVDAKSVIAALKSK---GVSAIGAAGFCWGGVVAAKLAS-SH-DIQAAVVLHPGAI 158 (175)
Q Consensus 105 ~~~~~d~~~~~~~l~~~---~~~~i~v~G~S~GG~ia~~~a~-~~-~v~~~v~~~p~~~ 158 (175)
.....|+..++++++++ +.++|+++|||+||.+++.++. .+ .+.+++.+++...
T Consensus 73 ~~~~~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~ 131 (212)
T TIGR01840 73 TGEVESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPY 131 (212)
T ss_pred CccHHHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcc
Confidence 12346788888888775 3468999999999999999874 34 5788888887654
No 51
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.37 E-value=9.2e-12 Score=99.03 Aligned_cols=121 Identities=12% Similarity=0.065 Sum_probs=76.4
Q ss_pred eEEEeeCCeeEEEEccCCCCCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCC-chhhHHHHH
Q 030535 22 GTVQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNN-PQFDREAWR 99 (175)
Q Consensus 22 ~~~~~~~~~~~~~~~p~~~~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~-~~~~~~~~~ 99 (175)
+.+...++.+.++.. .+....++||++||+.+... . ..+...+..++|+|+++|++ +|.+. .+.. ......
T Consensus 7 ~~~~~~~~~~l~y~~-~g~~~~~~lvllHG~~~~~~-~-~~~~~~~~~~~~~vi~~D~~G~G~S~-~~~~~~~~~~~--- 79 (306)
T TIGR01249 7 GYLNVSDNHQLYYEQ-SGNPDGKPVVFLHGGPGSGT-D-PGCRRFFDPETYRIVLFDQRGCGKST-PHACLEENTTW--- 79 (306)
T ss_pred CeEEcCCCcEEEEEE-CcCCCCCEEEEECCCCCCCC-C-HHHHhccCccCCEEEEECCCCCCCCC-CCCCcccCCHH---
Confidence 344444667766553 22223567999998766532 2 23445565678999999999 77654 2211 111111
Q ss_pred HhcCCCcchhHHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhcc-C-CCccEEEEecCCCC
Q 030535 100 KIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLAS-S-HDIQAAVVLHPGAI 158 (175)
Q Consensus 100 ~~~~~~~~~~d~~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a~-~-~~v~~~v~~~p~~~ 158 (175)
+..+|+..+++.+ +.+++.++||||||.+++.++. . ++++++|+..+...
T Consensus 80 ------~~~~dl~~l~~~l---~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~ 131 (306)
T TIGR01249 80 ------DLVADIEKLREKL---GIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLL 131 (306)
T ss_pred ------HHHHHHHHHHHHc---CCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccC
Confidence 1224555444443 5678999999999999999874 3 47899998876543
No 52
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.36 E-value=2.7e-12 Score=104.83 Aligned_cols=116 Identities=20% Similarity=0.271 Sum_probs=74.7
Q ss_pred CCeeEEEEccCCCCCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCc
Q 030535 28 GGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDK 106 (175)
Q Consensus 28 ~~~~~~~~~p~~~~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~ 106 (175)
..+++|+..|..+++.|.||++-|.-+...+.+..+.++|+.+|++++++|.+ .|.+...+-..+.
T Consensus 175 ~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~------------- 241 (411)
T PF06500_consen 175 KTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDS------------- 241 (411)
T ss_dssp CEEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-C-------------
T ss_pred cEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcCH-------------
Confidence 44778999878666667666665444554444556667899999999999998 5653201111111
Q ss_pred chhHHHHHHHHHHhc---CCCeEEEEEEeccHHHHHHhcc--CCCccEEEEecCCC
Q 030535 107 GYVDAKSVIAALKSK---GVSAIGAAGFCWGGVVAAKLAS--SHDIQAAVVLHPGA 157 (175)
Q Consensus 107 ~~~d~~~~~~~l~~~---~~~~i~v~G~S~GG~ia~~~a~--~~~v~~~v~~~p~~ 157 (175)
..-..+++++|.++ |.++|+++|+||||.++.++|. ++||+++|...|..
T Consensus 242 -~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~v 296 (411)
T PF06500_consen 242 -SRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPV 296 (411)
T ss_dssp -CHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---
T ss_pred -HHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchH
Confidence 12357889999887 3569999999999999999883 47999999888764
No 53
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.35 E-value=1.1e-11 Score=95.79 Aligned_cols=114 Identities=24% Similarity=0.248 Sum_probs=78.5
Q ss_pred CeeEEEEccCCCCCCeEEEEecCCCCCCcchHHHHHHHHHhC-CCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCc
Q 030535 29 GLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGA-GFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDK 106 (175)
Q Consensus 29 ~~~~~~~~p~~~~~~~~vv~lhg~~g~~~~~~~~~a~~la~~-G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~ 106 (175)
.++.|+..|. ....|.++++| |.|...-.|.-++..+.++ -.+|+++|+| ||.+..... .+-+.+ .
T Consensus 61 t~n~Y~t~~~-~t~gpil~l~H-G~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e-~dlS~e---------T 128 (343)
T KOG2564|consen 61 TFNVYLTLPS-ATEGPILLLLH-GGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENE-DDLSLE---------T 128 (343)
T ss_pred eEEEEEecCC-CCCccEEEEee-cCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCCh-hhcCHH---------H
Confidence 4778887433 33556666666 5565556788899999887 6788999999 888762221 122222 2
Q ss_pred chhHHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhccC---CCccEEEEec
Q 030535 107 GYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASS---HDIQAAVVLH 154 (175)
Q Consensus 107 ~~~d~~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a~~---~~v~~~v~~~ 154 (175)
...|+-++++.+-...+.+|.++||||||.|+...|.. +.+.+++.+.
T Consensus 129 ~~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lpsl~Gl~viD 179 (343)
T KOG2564|consen 129 MSKDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPSLAGLVVID 179 (343)
T ss_pred HHHHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchhhhceEEEE
Confidence 23778888877765556799999999999999886643 4566666544
No 54
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.35 E-value=7.1e-12 Score=96.03 Aligned_cols=109 Identities=26% Similarity=0.350 Sum_probs=81.3
Q ss_pred eEEEEccCCCCCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhH
Q 030535 31 NTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVD 110 (175)
Q Consensus 31 ~~~~~~p~~~~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d 110 (175)
+..+..|..++..|.|+|+||+.-.+ ..|..+.++++++||.|++|+++...+ + +...++ ++
T Consensus 34 pLlI~tP~~~G~yPVilF~HG~~l~n-s~Ys~lL~HIASHGfIVVAPQl~~~~~---p-~~~~Ei-------------~~ 95 (307)
T PF07224_consen 34 PLLIVTPSEAGTYPVILFLHGFNLYN-SFYSQLLAHIASHGFIVVAPQLYTLFP---P-DGQDEI-------------KS 95 (307)
T ss_pred CeEEecCCcCCCccEEEEeechhhhh-HHHHHHHHHHhhcCeEEEechhhcccC---C-CchHHH-------------HH
Confidence 34556566667889999999666554 688999999999999999999874322 1 111222 67
Q ss_pred HHHHHHHHHhc-----------CCCeEEEEEEeccHHHHHHhccC----CCccEEEEecCCC
Q 030535 111 AKSVIAALKSK-----------GVSAIGAAGFCWGGVVAAKLASS----HDIQAAVVLHPGA 157 (175)
Q Consensus 111 ~~~~~~~l~~~-----------~~~~i~v~G~S~GG~ia~~~a~~----~~v~~~v~~~p~~ 157 (175)
+.++++|+.+. +.++++++|||+||-+|..+|.. -.+.++|.+.|.-
T Consensus 96 aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~ 157 (307)
T PF07224_consen 96 AASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVA 157 (307)
T ss_pred HHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccC
Confidence 88888888764 34699999999999999998843 2578888777664
No 55
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.35 E-value=1.3e-11 Score=100.07 Aligned_cols=120 Identities=13% Similarity=0.098 Sum_probs=82.1
Q ss_pred eeCCeeEEEEccCCC-CCCeEEEEecCCCCCC----cchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHH
Q 030535 26 QLGGLNTYVTGSGPP-DSKSAILLISDVFGYE----APLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWR 99 (175)
Q Consensus 26 ~~~~~~~~~~~p~~~-~~~~~vv~lhg~~g~~----~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~ 99 (175)
+.+.+..+.+.|..+ ..+++||++|+..... ....+.++++|+++||.|+++|++ +|.+. ...++.++.
T Consensus 44 ~~~~~~l~~~~~~~~~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~-----~~~~~~d~~ 118 (350)
T TIGR01836 44 REDKVVLYRYTPVKDNTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRAD-----RYLTLDDYI 118 (350)
T ss_pred EcCcEEEEEecCCCCcCCCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHH-----hcCCHHHHH
Confidence 456677777754432 2345688888643211 112367999999999999999986 33221 111233332
Q ss_pred HhcCCCcchhHHHHHHHHHHhc-CCCeEEEEEEeccHHHHHHhcc-C-CCccEEEEecCCCC
Q 030535 100 KIHNTDKGYVDAKSVIAALKSK-GVSAIGAAGFCWGGVVAAKLAS-S-HDIQAAVVLHPGAI 158 (175)
Q Consensus 100 ~~~~~~~~~~d~~~~~~~l~~~-~~~~i~v~G~S~GG~ia~~~a~-~-~~v~~~v~~~p~~~ 158 (175)
. +|+.+++++++++ +.+++.++||||||.+++.++. . .+++++|++++...
T Consensus 119 ~--------~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~ 172 (350)
T TIGR01836 119 N--------GYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVD 172 (350)
T ss_pred H--------HHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccc
Confidence 1 5588889988876 5679999999999999999764 3 47999998887654
No 56
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.34 E-value=9.4e-12 Score=106.58 Aligned_cols=117 Identities=14% Similarity=0.011 Sum_probs=82.7
Q ss_pred eeEEEEccCCCCCCeEEEEecCCCCCCc---chHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCC
Q 030535 30 LNTYVTGSGPPDSKSAILLISDVFGYEA---PLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTD 105 (175)
Q Consensus 30 ~~~~~~~p~~~~~~~~vv~lhg~~g~~~---~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~ 105 (175)
+.+++++|...++.|+||++|+...... ......++.|+++||+|+++|++ +|.+. .... . .. .
T Consensus 9 L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~-g~~~-~---------~~-~ 76 (550)
T TIGR00976 9 LAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASE-GEFD-L---------LG-S 76 (550)
T ss_pred EEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCC-CceE-e---------cC-c
Confidence 4455676665557788999995443221 12233567899999999999998 66554 1110 0 01 2
Q ss_pred cchhHHHHHHHHHHhcC--CCeEEEEEEeccHHHHHHhccC--CCccEEEEecCCCC
Q 030535 106 KGYVDAKSVIAALKSKG--VSAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPGAI 158 (175)
Q Consensus 106 ~~~~d~~~~~~~l~~~~--~~~i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~~~ 158 (175)
...+|+.++++|+.++. ..+|+++|+||||.+++.+|.. ++++++|+..+...
T Consensus 77 ~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d 133 (550)
T TIGR00976 77 DEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWD 133 (550)
T ss_pred ccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccc
Confidence 34589999999998873 3599999999999999998753 68999998776643
No 57
>PRK07581 hypothetical protein; Validated
Probab=99.34 E-value=2.5e-12 Score=103.58 Aligned_cols=127 Identities=14% Similarity=0.157 Sum_probs=75.4
Q ss_pred eeCCeeEEEEccCC-CCCCeEEEEecCCCCCCcchHHHHH---HHHHhCCCEEEeccCC-CCCCCCCCCCc--hhhHHHH
Q 030535 26 QLGGLNTYVTGSGP-PDSKSAILLISDVFGYEAPLFRKLA---DKVAGAGFLVVAPDFF-YGDPIVDLNNP--QFDREAW 98 (175)
Q Consensus 26 ~~~~~~~~~~~p~~-~~~~~~vv~lhg~~g~~~~~~~~~a---~~la~~G~~vi~~D~~-~g~~~~~~~~~--~~~~~~~ 98 (175)
++++++.++..-.+ ...++.+|++|||++.+...+..+. +.|...+|+|+++|++ +|.+. .+... ..++..
T Consensus 22 ~~~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~-~~~~~~~~~~~~~- 99 (339)
T PRK07581 22 TLPDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSS-SPSNTPAPFNAAR- 99 (339)
T ss_pred CcCCceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCC-CCCCCCCCCCCCC-
Confidence 55667765542122 1123345555667664434444433 3676678999999999 78654 22211 111100
Q ss_pred HHhcCCCcchhHHHHHHHHHH-hcCCCe-EEEEEEeccHHHHHHhccC--CCccEEEEecCCC
Q 030535 99 RKIHNTDKGYVDAKSVIAALK-SKGVSA-IGAAGFCWGGVVAAKLASS--HDIQAAVVLHPGA 157 (175)
Q Consensus 99 ~~~~~~~~~~~d~~~~~~~l~-~~~~~~-i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~~ 157 (175)
.......+|+.+....+. +.+.++ ..|+||||||.+++.+|.. ++|+++|++++..
T Consensus 100 ---~~~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~ 159 (339)
T PRK07581 100 ---FPHVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTA 159 (339)
T ss_pred ---CCceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCC
Confidence 000112356666455443 468889 4799999999999998854 4899999887654
No 58
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.32 E-value=1.4e-11 Score=96.95 Aligned_cols=108 Identities=17% Similarity=0.158 Sum_probs=73.5
Q ss_pred CCCeEEEEecCCCCCC-cchHHHHHHHHHh-CCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHH
Q 030535 41 DSKSAILLISDVFGYE-APLFRKLADKVAG-AGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAAL 118 (175)
Q Consensus 41 ~~~~~vv~lhg~~g~~-~~~~~~~a~~la~-~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l 118 (175)
..+|.+|++||+.+.. ......+++.|.+ .+|+|+++|++.+. . ...... . .......+++..+++++
T Consensus 34 ~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~-~--~~y~~a-~------~~~~~v~~~la~~l~~L 103 (275)
T cd00707 34 PSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGA-N--PNYPQA-V------NNTRVVGAELAKFLDFL 103 (275)
T ss_pred CCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECcccc-c--cChHHH-H------HhHHHHHHHHHHHHHHH
Confidence 3568899999887654 2334556665544 58999999987432 1 111110 0 01112226778888888
Q ss_pred Hhc---CCCeEEEEEEeccHHHHHHhccC--CCccEEEEecCCCC
Q 030535 119 KSK---GVSAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPGAI 158 (175)
Q Consensus 119 ~~~---~~~~i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~~~ 158 (175)
.+. +.+++.++||||||.++..++.. .+|++++++.|+..
T Consensus 104 ~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 104 VDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred HHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 764 35689999999999999998854 58999999988865
No 59
>PRK10162 acetyl esterase; Provisional
Probab=99.32 E-value=2.7e-11 Score=97.15 Aligned_cols=113 Identities=17% Similarity=0.152 Sum_probs=80.8
Q ss_pred CCeeEEEEccCCCCCCeEEEEecCCCC--CCcchHHHHHHHHHhC-CCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCC
Q 030535 28 GGLNTYVTGSGPPDSKSAILLISDVFG--YEAPLFRKLADKVAGA-GFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNT 104 (175)
Q Consensus 28 ~~~~~~~~~p~~~~~~~~vv~lhg~~g--~~~~~~~~~a~~la~~-G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~ 104 (175)
+.+++.+++|... ..|.||++|||.- .+...+..+++.|+.+ |+.|+.+||+.. +. . .+
T Consensus 67 g~i~~~~y~P~~~-~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrla-pe--~--------------~~ 128 (318)
T PRK10162 67 GQVETRLYYPQPD-SQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLS-PE--A--------------RF 128 (318)
T ss_pred CceEEEEECCCCC-CCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCC-CC--C--------------CC
Confidence 3477778866543 4688999998641 2224567789999874 999999998621 21 0 11
Q ss_pred CcchhHHHHHHHHHHhc----C--CCeEEEEEEeccHHHHHHhcc---C-----CCccEEEEecCCCC
Q 030535 105 DKGYVDAKSVIAALKSK----G--VSAIGAAGFCWGGVVAAKLAS---S-----HDIQAAVVLHPGAI 158 (175)
Q Consensus 105 ~~~~~d~~~~~~~l~~~----~--~~~i~v~G~S~GG~ia~~~a~---~-----~~v~~~v~~~p~~~ 158 (175)
....+|+.++++|+.++ + .++|+++|+|+||.+++.++. + .+++++++++|...
T Consensus 129 p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~ 196 (318)
T PRK10162 129 PQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYG 196 (318)
T ss_pred CCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccC
Confidence 22347888888888754 3 458999999999999998763 1 46899999999764
No 60
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.32 E-value=1.9e-11 Score=97.08 Aligned_cols=106 Identities=23% Similarity=0.260 Sum_probs=79.0
Q ss_pred CCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchh--hHHHHHHhcCCCcchhHHHHHHHH
Q 030535 41 DSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQF--DREAWRKIHNTDKGYVDAKSVIAA 117 (175)
Q Consensus 41 ~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~~~~~ 117 (175)
....++|++|| +|.....|..=.+.|++ ...|+++|++ +|.+. .|..... ....++ ++.+=+|
T Consensus 88 ~~~~plVliHG-yGAg~g~f~~Nf~~La~-~~~vyaiDllG~G~SS-RP~F~~d~~~~e~~f-----------vesiE~W 153 (365)
T KOG4409|consen 88 ANKTPLVLIHG-YGAGLGLFFRNFDDLAK-IRNVYAIDLLGFGRSS-RPKFSIDPTTAEKEF-----------VESIEQW 153 (365)
T ss_pred cCCCcEEEEec-cchhHHHHHHhhhhhhh-cCceEEecccCCCCCC-CCCCCCCcccchHHH-----------HHHHHHH
Confidence 35677999995 44334556666667776 7999999999 78765 3432211 112222 5666777
Q ss_pred HHhcCCCeEEEEEEeccHHHHHHhccC--CCccEEEEecCCCCCc
Q 030535 118 LKSKGVSAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPGAITV 160 (175)
Q Consensus 118 l~~~~~~~i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~~~~~ 160 (175)
-++.+..+..|+||||||.++..||.. ++|+.+|++.|.....
T Consensus 154 R~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~ 198 (365)
T KOG4409|consen 154 RKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPE 198 (365)
T ss_pred HHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEeccccccc
Confidence 778889999999999999999999954 5899999999999876
No 61
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.31 E-value=2.3e-11 Score=105.55 Aligned_cols=123 Identities=19% Similarity=0.154 Sum_probs=85.7
Q ss_pred eeEEEEccCCCCC---CeEEEEecCCCC-CCcchHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCC
Q 030535 30 LNTYVTGSGPPDS---KSAILLISDVFG-YEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTD 105 (175)
Q Consensus 30 ~~~~~~~p~~~~~---~~~vv~lhg~~g-~~~~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~ 105 (175)
+.+|+..|.+.++ .|.||++|||.. .....+....+.|+++||+|+.+|+++-... . .++.+......-.
T Consensus 378 i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~Gy---G---~~F~~~~~~~~g~ 451 (620)
T COG1506 378 IHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGY---G---REFADAIRGDWGG 451 (620)
T ss_pred EEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCcc---H---HHHHHhhhhccCC
Confidence 6788887665332 489999999853 2224577889999999999999998632221 0 0111111111122
Q ss_pred cchhHHHHHHHHHHhcC---CCeEEEEEEeccHHHHHHhc-cCCCccEEEEecCCCC
Q 030535 106 KGYVDAKSVIAALKSKG---VSAIGAAGFCWGGVVAAKLA-SSHDIQAAVVLHPGAI 158 (175)
Q Consensus 106 ~~~~d~~~~~~~l~~~~---~~~i~v~G~S~GG~ia~~~a-~~~~v~~~v~~~p~~~ 158 (175)
...+|+.+.++++.+.+ .+|++|+|+|+||.+++..+ ..++++++++.++...
T Consensus 452 ~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~~f~a~~~~~~~~~ 508 (620)
T COG1506 452 VDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTPRFKAAVAVAGGVD 508 (620)
T ss_pred ccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCchhheEEeccCcch
Confidence 34488999999887774 35999999999999999966 5578999988887543
No 62
>PRK05855 short chain dehydrogenase; Validated
Probab=99.30 E-value=3e-11 Score=103.20 Aligned_cols=107 Identities=17% Similarity=0.184 Sum_probs=73.5
Q ss_pred eEEEeeCCeeEEEEccCCCCCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCC-CchhhHHHHH
Q 030535 22 GTVQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLN-NPQFDREAWR 99 (175)
Q Consensus 22 ~~~~~~~~~~~~~~~p~~~~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~-~~~~~~~~~~ 99 (175)
..+.+.++.+.++.. .++.+.|+|||+||+.+.. ..|..+.+.| ..||+|+++|++ +|.+. .+. ....+...+
T Consensus 5 ~~~~~~~g~~l~~~~-~g~~~~~~ivllHG~~~~~-~~w~~~~~~L-~~~~~Vi~~D~~G~G~S~-~~~~~~~~~~~~~- 79 (582)
T PRK05855 5 RTVVSSDGVRLAVYE-WGDPDRPTVVLVHGYPDNH-EVWDGVAPLL-ADRFRVVAYDVRGAGRSS-APKRTAAYTLARL- 79 (582)
T ss_pred EEEEeeCCEEEEEEE-cCCCCCCeEEEEcCCCchH-HHHHHHHHHh-hcceEEEEecCCCCCCCC-CCCcccccCHHHH-
Confidence 445677888866553 2223468899999776554 6789999999 568999999999 78654 222 112223322
Q ss_pred HhcCCCcchhHHHHHHHHHHhcCCC-eEEEEEEeccHHHHHHhccC
Q 030535 100 KIHNTDKGYVDAKSVIAALKSKGVS-AIGAAGFCWGGVVAAKLASS 144 (175)
Q Consensus 100 ~~~~~~~~~~d~~~~~~~l~~~~~~-~i~v~G~S~GG~ia~~~a~~ 144 (175)
.+|+..+++.+ +.. ++.++||||||.+++.++..
T Consensus 80 --------a~dl~~~i~~l---~~~~~~~lvGhS~Gg~~a~~~a~~ 114 (582)
T PRK05855 80 --------ADDFAAVIDAV---SPDRPVHLLAHDWGSIQGWEAVTR 114 (582)
T ss_pred --------HHHHHHHHHHh---CCCCcEEEEecChHHHHHHHHHhC
Confidence 26666666655 333 59999999999999887744
No 63
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.29 E-value=2e-11 Score=98.50 Aligned_cols=125 Identities=22% Similarity=0.182 Sum_probs=72.3
Q ss_pred eeEEEEccCC-CCCCeEEEEecCCCCCCcch------------------HHHHHHHHHhCCCEEEeccCC-CCCCCC-CC
Q 030535 30 LNTYVTGSGP-PDSKSAILLISDVFGYEAPL------------------FRKLADKVAGAGFLVVAPDFF-YGDPIV-DL 88 (175)
Q Consensus 30 ~~~~~~~p~~-~~~~~~vv~lhg~~g~~~~~------------------~~~~a~~la~~G~~vi~~D~~-~g~~~~-~~ 88 (175)
++.|+..|.. +++.|+||++||-.+.. +. -..++.+|+++||.|+++|.. +|.... +.
T Consensus 101 vpaylLvPd~~~~p~PAVL~lHgHg~~K-e~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~ 179 (390)
T PF12715_consen 101 VPAYLLVPDGAKGPFPAVLCLHGHGGGK-EKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEG 179 (390)
T ss_dssp EEEEEEEETT--S-EEEEEEE--TT--H-HHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCC
T ss_pred EEEEEEecCCCCCCCCEEEEeCCCCCCc-ccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccc
Confidence 5577777777 56789999999743221 11 134789999999999999987 664220 11
Q ss_pred CCc-----hhhHHHHHHhcCC---CcchhHHHHHHHHHHhcC---CCeEEEEEEeccHHHHHHhc-cCCCccEEEEecC
Q 030535 89 NNP-----QFDREAWRKIHNT---DKGYVDAKSVIAALKSKG---VSAIGAAGFCWGGVVAAKLA-SSHDIQAAVVLHP 155 (175)
Q Consensus 89 ~~~-----~~~~~~~~~~~~~---~~~~~d~~~~~~~l~~~~---~~~i~v~G~S~GG~ia~~~a-~~~~v~~~v~~~p 155 (175)
... ...+..++..... -...-|...+++||.+++ .++|+++||||||..++.+| .++||++.|...=
T Consensus 180 ~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALDdRIka~v~~~~ 258 (390)
T PF12715_consen 180 AAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALDDRIKATVANGY 258 (390)
T ss_dssp CTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH-TT--EEEEES-
T ss_pred cccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcchhhHhHhhhhh
Confidence 111 1122222222221 112234455999998873 57999999999999999976 6789988886543
No 64
>PLN02872 triacylglycerol lipase
Probab=99.26 E-value=8.8e-12 Score=102.60 Aligned_cols=137 Identities=18% Similarity=0.133 Sum_probs=86.2
Q ss_pred CCccceEEEeeCCeeEEEEc-cCCC-----CCCeEEEEecCCCCCCcch------HHHHHHHHHhCCCEEEeccCC-CCC
Q 030535 17 SGCGAGTVQQLGGLNTYVTG-SGPP-----DSKSAILLISDVFGYEAPL------FRKLADKVAGAGFLVVAPDFF-YGD 83 (175)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~-p~~~-----~~~~~vv~lhg~~g~~~~~------~~~~a~~la~~G~~vi~~D~~-~g~ 83 (175)
|........+.+|....+.+ |.+. .++|+|+++||+.... .. .+.++..|+++||.|+++|+| ++.
T Consensus 42 y~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss-~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~ 120 (395)
T PLN02872 42 YSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAG-DAWFLNSPEQSLGFILADHGFDVWVGNVRGTRW 120 (395)
T ss_pred CCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccc-cceeecCcccchHHHHHhCCCCccccccccccc
Confidence 33444555666776665554 2211 2357899999875432 22 246788899999999999998 442
Q ss_pred CCCCC--CCchhhHHHHHHhcCCCcc-hhHHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhccCC----CccEEEEecCC
Q 030535 84 PIVDL--NNPQFDREAWRKIHNTDKG-YVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSH----DIQAAVVLHPG 156 (175)
Q Consensus 84 ~~~~~--~~~~~~~~~~~~~~~~~~~-~~d~~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a~~~----~v~~~v~~~p~ 156 (175)
+..+. ...+... | ....++. ..|+.++++++.+...+++.++||||||.+++.++..+ .|+++++++|.
T Consensus 121 s~gh~~~~~~~~~f--w--~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~~~p~~~~~v~~~~~l~P~ 196 (395)
T PLN02872 121 SYGHVTLSEKDKEF--W--DWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAALTQPNVVEMVEAAALLCPI 196 (395)
T ss_pred ccCCCCCCccchhc--c--CCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHhhChHHHHHHHHHHHhcch
Confidence 21001 1001110 1 1122222 27999999999875457999999999999999755443 57888888877
Q ss_pred CC
Q 030535 157 AI 158 (175)
Q Consensus 157 ~~ 158 (175)
..
T Consensus 197 ~~ 198 (395)
T PLN02872 197 SY 198 (395)
T ss_pred hh
Confidence 53
No 65
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.25 E-value=2e-11 Score=98.99 Aligned_cols=121 Identities=18% Similarity=0.218 Sum_probs=74.1
Q ss_pred EeeCCeeEEEEccCC--CCCCeEEEEecCCCCCCcc----------hHHHHH---HHHHhCCCEEEeccCCC--CCCCCC
Q 030535 25 QQLGGLNTYVTGSGP--PDSKSAILLISDVFGYEAP----------LFRKLA---DKVAGAGFLVVAPDFFY--GDPIVD 87 (175)
Q Consensus 25 ~~~~~~~~~~~~p~~--~~~~~~vv~lhg~~g~~~~----------~~~~~a---~~la~~G~~vi~~D~~~--g~~~~~ 87 (175)
+.+++++.++..-.+ ....++||++||..+.... .|..+. +.|..++|.|+++|+++ +.+. .
T Consensus 11 ~~~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s-~ 89 (351)
T TIGR01392 11 GVLSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGST-G 89 (351)
T ss_pred CccCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCC-C
Confidence 355666654442121 1235789999976663311 355554 35666789999999984 2221 1
Q ss_pred CCC------------chhhHHHHHHhcCCCcchhHHHHHHHHHHhcCCCe-EEEEEEeccHHHHHHhccC--CCccEEEE
Q 030535 88 LNN------------PQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVSA-IGAAGFCWGGVVAAKLASS--HDIQAAVV 152 (175)
Q Consensus 88 ~~~------------~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~-i~v~G~S~GG~ia~~~a~~--~~v~~~v~ 152 (175)
+.+ ...++.++ +..+.+.+++.+.++ +.++||||||.+++.+|.. .+|+++|+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl 157 (351)
T TIGR01392 90 PSSINPGGRPYGSDFPLITIRDD------------VKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVV 157 (351)
T ss_pred CCCCCCCCCcCCCCCCCCcHHHH------------HHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEE
Confidence 210 01122222 233344444557778 9999999999999998754 47999999
Q ss_pred ecCCCC
Q 030535 153 LHPGAI 158 (175)
Q Consensus 153 ~~p~~~ 158 (175)
+++...
T Consensus 158 ~~~~~~ 163 (351)
T TIGR01392 158 LATSAR 163 (351)
T ss_pred EccCCc
Confidence 987654
No 66
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.23 E-value=2.2e-11 Score=99.70 Aligned_cols=129 Identities=16% Similarity=0.265 Sum_probs=69.7
Q ss_pred CCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCCCCC-CCCCC-CCchh-h---------------HH------
Q 030535 41 DSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGD-PIVDL-NNPQF-D---------------RE------ 96 (175)
Q Consensus 41 ~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~~g~-~~~~~-~~~~~-~---------------~~------ 96 (175)
.+.|.|||-||..|.. ..+..++..||++||.|+++|++.|. +.+-. .+... . +.
T Consensus 98 ~~~PvvIFSHGlgg~R-~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSR-TSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEE 176 (379)
T ss_dssp S-EEEEEEE--TT--T-TTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGG
T ss_pred CCCCEEEEeCCCCcch-hhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchh
Confidence 4568888888666654 67889999999999999999998653 21001 00000 0 00
Q ss_pred HH-HHhcCCCcchhHHHHHHHHHHhc-----------------------CCCeEEEEEEeccHHHHHHhc-cCCCccEEE
Q 030535 97 AW-RKIHNTDKGYVDAKSVIAALKSK-----------------------GVSAIGAAGFCWGGVVAAKLA-SSHDIQAAV 151 (175)
Q Consensus 97 ~~-~~~~~~~~~~~d~~~~~~~l~~~-----------------------~~~~i~v~G~S~GG~ia~~~a-~~~~v~~~v 151 (175)
.+ +.....+....|+..+++.|++. +.++|+++|||+||.+++..+ .+.+++++|
T Consensus 177 ~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d~r~~~~I 256 (379)
T PF03403_consen 177 EFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQDTRFKAGI 256 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH-TT--EEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhccCcceEE
Confidence 00 00001123346677788777641 235899999999999999965 568999999
Q ss_pred EecCCCCCc--ccccccCccc
Q 030535 152 VLHPGAITV--DDINGKFETS 170 (175)
Q Consensus 152 ~~~p~~~~~--~~~~~~~~p~ 170 (175)
++.|.+.+. +....+..|+
T Consensus 257 ~LD~W~~Pl~~~~~~~i~~P~ 277 (379)
T PF03403_consen 257 LLDPWMFPLGDEIYSKIPQPL 277 (379)
T ss_dssp EES---TTS-GGGGGG--S-E
T ss_pred EeCCcccCCCcccccCCCCCE
Confidence 999998753 2233444453
No 67
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.23 E-value=6.3e-11 Score=95.02 Aligned_cols=129 Identities=20% Similarity=0.126 Sum_probs=79.7
Q ss_pred eeEEEEccC-CCCCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CC-CCCCCCCCch---------hhHHH
Q 030535 30 LNTYVTGSG-PPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YG-DPIVDLNNPQ---------FDREA 97 (175)
Q Consensus 30 ~~~~~~~p~-~~~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g-~~~~~~~~~~---------~~~~~ 97 (175)
+.+|+..|. .+++.|+||.+||..+.. ..+.... .++.+||.|+.+|.+ .| .+. ...... ..+..
T Consensus 69 V~g~l~~P~~~~~~~Pavv~~hGyg~~~-~~~~~~~-~~a~~G~~vl~~d~rGqg~~~~-d~~~~~~~~~~g~~~~g~~~ 145 (320)
T PF05448_consen 69 VYGWLYRPKNAKGKLPAVVQFHGYGGRS-GDPFDLL-PWAAAGYAVLAMDVRGQGGRSP-DYRGSSGGTLKGHITRGIDD 145 (320)
T ss_dssp EEEEEEEES-SSSSEEEEEEE--TT--G-GGHHHHH-HHHHTT-EEEEE--TTTSSSS--B-SSBSSS-SSSSTTTTTTS
T ss_pred EEEEEEecCCCCCCcCEEEEecCCCCCC-CCccccc-ccccCCeEEEEecCCCCCCCCC-CccccCCCCCccHHhcCccC
Confidence 557888888 556779999999655543 3444433 478899999999987 44 111 000000 00000
Q ss_pred HHHhcCCCcchhHHHHHHHHHHhcC---CCeEEEEEEeccHHHHHHhc-cCCCccEEEEecCCCCCcc
Q 030535 98 WRKIHNTDKGYVDAKSVIAALKSKG---VSAIGAAGFCWGGVVAAKLA-SSHDIQAAVVLHPGAITVD 161 (175)
Q Consensus 98 ~~~~~~~~~~~~d~~~~~~~l~~~~---~~~i~v~G~S~GG~ia~~~a-~~~~v~~~v~~~p~~~~~~ 161 (175)
..++..+.....|+..+++++.++. .++|++.|.|+||.+++.+| .++||+++++..|.+.+..
T Consensus 146 ~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~rv~~~~~~vP~l~d~~ 213 (320)
T PF05448_consen 146 NPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDPRVKAAAADVPFLCDFR 213 (320)
T ss_dssp -TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSST-SEEEEESESSSSHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCccccEEEecCCCccchh
Confidence 0000011123478889999999883 46999999999999999965 6789999999999987643
No 68
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.21 E-value=2.3e-10 Score=94.95 Aligned_cols=106 Identities=13% Similarity=0.111 Sum_probs=71.9
Q ss_pred CCeEEEEecCCCCCC-cchHH-HHHHHHHh--CCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHH
Q 030535 42 SKSAILLISDVFGYE-APLFR-KLADKVAG--AGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIA 116 (175)
Q Consensus 42 ~~~~vv~lhg~~g~~-~~~~~-~~a~~la~--~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 116 (175)
.+|++|++||+.+.. ...|. .+++.|.. ..|+|+++|++ ++.+. ......... ...+++..+++
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~--y~~a~~~t~---------~vg~~la~lI~ 108 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQH--YPTSAAYTK---------LVGKDVAKFVN 108 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCC--CccccccHH---------HHHHHHHHHHH
Confidence 568899999876532 22333 46666543 26999999998 55432 111111111 11266788888
Q ss_pred HHHhc---CCCeEEEEEEeccHHHHHHhccC--CCccEEEEecCCCC
Q 030535 117 ALKSK---GVSAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPGAI 158 (175)
Q Consensus 117 ~l~~~---~~~~i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~~~ 158 (175)
+|.+. +.+++.++||||||.++..++.. .+|.+++++.|+..
T Consensus 109 ~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 109 WMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred HHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 87643 46799999999999999998854 47999999999864
No 69
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.21 E-value=5.5e-10 Score=94.90 Aligned_cols=141 Identities=12% Similarity=0.152 Sum_probs=90.7
Q ss_pred CcccccCCCCCCCCCCccceEEE-eeCCeeEEEEccCCCC-CCeEEEEecCCCCCCcchH-----HHHHHHHHhCCCEEE
Q 030535 3 GSQCFENPPKLSPGSGCGAGTVQ-QLGGLNTYVTGSGPPD-SKSAILLISDVFGYEAPLF-----RKLADKVAGAGFLVV 75 (175)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~-~~~~vv~lhg~~g~~~~~~-----~~~a~~la~~G~~vi 75 (175)
++++....|++-...+.-.|+.+ +.+.+..+.+.|..+. .+++||++|++.. +...+ +.++++|+++||.|+
T Consensus 146 i~~~~~~~f~vg~~~a~Tpg~VV~~~~~~eLi~Y~P~t~~~~~~PlLiVp~~i~-k~yilDL~p~~Slv~~L~~qGf~V~ 224 (532)
T TIGR01838 146 IRQTDSSAFEVGRNLATTPGAVVFENELFQLIQYEPTTETVHKTPLLIVPPWIN-KYYILDLRPQNSLVRWLVEQGHTVF 224 (532)
T ss_pred CCCCCccceeeCCCCCCCCCeEEEECCcEEEEEeCCCCCcCCCCcEEEECcccc-cceeeecccchHHHHHHHHCCcEEE
Confidence 45677777776443333334443 4455777777655443 4578999997643 22222 479999999999999
Q ss_pred eccCC-CCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhc-CCCeEEEEEEeccHHHHHH----hc-cC--CC
Q 030535 76 APDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK-GVSAIGAAGFCWGGVVAAK----LA-SS--HD 146 (175)
Q Consensus 76 ~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~-~~~~i~v~G~S~GG~ia~~----~a-~~--~~ 146 (175)
++|++ +|.+. . .....++. .+++.++++.+.+. +.+++.++||||||.++.. ++ .. ++
T Consensus 225 ~iDwrgpg~s~--~---~~~~ddY~--------~~~i~~al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~r 291 (532)
T TIGR01838 225 VISWRNPDASQ--A---DKTFDDYI--------RDGVIAALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKR 291 (532)
T ss_pred EEECCCCCccc--c---cCChhhhH--------HHHHHHHHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCc
Confidence 99997 55432 1 11111222 14577777777754 7789999999999998622 23 32 47
Q ss_pred ccEEEEecCCC
Q 030535 147 IQAAVVLHPGA 157 (175)
Q Consensus 147 v~~~v~~~p~~ 157 (175)
|++++++....
T Consensus 292 v~slvll~t~~ 302 (532)
T TIGR01838 292 IKSATFFTTLL 302 (532)
T ss_pred cceEEEEecCc
Confidence 99999887654
No 70
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.20 E-value=5.6e-10 Score=87.71 Aligned_cols=125 Identities=18% Similarity=0.150 Sum_probs=68.7
Q ss_pred EEEEccCC--CCCCeEEEEecCCCCCCcchHHHH--HHHH-HhCCCEEEeccCC-CCCCCCCCCCch-h-hHHHHHHhcC
Q 030535 32 TYVTGSGP--PDSKSAILLISDVFGYEAPLFRKL--ADKV-AGAGFLVVAPDFF-YGDPIVDLNNPQ-F-DREAWRKIHN 103 (175)
Q Consensus 32 ~~~~~p~~--~~~~~~vv~lhg~~g~~~~~~~~~--a~~l-a~~G~~vi~~D~~-~g~~~~~~~~~~-~-~~~~~~~~~~ 103 (175)
..++.|.. .++.|.|+++||+.+.. ..+... .+.| ++.||.|++||.. .|.......... . ....|+-...
T Consensus 29 ~~v~~P~~~~~~~~P~vvllHG~~~~~-~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~ 107 (275)
T TIGR02821 29 FGVFLPPQAAAGPVPVLWYLSGLTCTH-ENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDAT 107 (275)
T ss_pred EEEEcCCCccCCCCCEEEEccCCCCCc-cHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCC
Confidence 56665553 33578999999776544 444322 3345 4569999999974 332210000000 0 0000000000
Q ss_pred ------CCcchhH-HHHHHHHHHh---cCCCeEEEEEEeccHHHHHHhccC--CCccEEEEecCCC
Q 030535 104 ------TDKGYVD-AKSVIAALKS---KGVSAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPGA 157 (175)
Q Consensus 104 ------~~~~~~d-~~~~~~~l~~---~~~~~i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~~ 157 (175)
....... ++.+...+.+ .+.++++++||||||.+++.++.. +.++++++++|..
T Consensus 108 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 173 (275)
T TIGR02821 108 EEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIV 173 (275)
T ss_pred cCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCcc
Confidence 0000122 2333444444 245689999999999999998743 4788999888874
No 71
>PRK11071 esterase YqiA; Provisional
Probab=99.19 E-value=1e-10 Score=87.28 Aligned_cols=89 Identities=20% Similarity=0.246 Sum_probs=60.0
Q ss_pred eEEEEecCCCCCCcchHH--HHHHHHHhC--CCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHH
Q 030535 44 SAILLISDVFGYEAPLFR--KLADKVAGA--GFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALK 119 (175)
Q Consensus 44 ~~vv~lhg~~g~~~~~~~--~~a~~la~~--G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 119 (175)
|+||++||+.+.. ..+. .+.+.|+++ +|+|+++|++. .+. +-...+.+.++
T Consensus 2 p~illlHGf~ss~-~~~~~~~~~~~l~~~~~~~~v~~~dl~g-~~~-----------------------~~~~~l~~l~~ 56 (190)
T PRK11071 2 STLLYLHGFNSSP-RSAKATLLKNWLAQHHPDIEMIVPQLPP-YPA-----------------------DAAELLESLVL 56 (190)
T ss_pred CeEEEECCCCCCc-chHHHHHHHHHHHHhCCCCeEEeCCCCC-CHH-----------------------HHHHHHHHHHH
Confidence 5799999766654 4454 456777664 79999999862 110 11222333444
Q ss_pred hcCCCeEEEEEEeccHHHHHHhccCCCccEEEEecCCCC
Q 030535 120 SKGVSAIGAAGFCWGGVVAAKLASSHDIQAAVVLHPGAI 158 (175)
Q Consensus 120 ~~~~~~i~v~G~S~GG~ia~~~a~~~~v~~~v~~~p~~~ 158 (175)
+.+.+++.++||||||.+++.+|..... .+|+++|...
T Consensus 57 ~~~~~~~~lvG~S~Gg~~a~~~a~~~~~-~~vl~~~~~~ 94 (190)
T PRK11071 57 EHGGDPLGLVGSSLGGYYATWLSQCFML-PAVVVNPAVR 94 (190)
T ss_pred HcCCCCeEEEEECHHHHHHHHHHHHcCC-CEEEECCCCC
Confidence 4566799999999999999998865333 3577888755
No 72
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.17 E-value=2.9e-10 Score=83.51 Aligned_cols=105 Identities=23% Similarity=0.317 Sum_probs=73.0
Q ss_pred CCCCeEEEEecCC--CC--CCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHH
Q 030535 40 PDSKSAILLISDV--FG--YEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSV 114 (175)
Q Consensus 40 ~~~~~~vv~lhg~--~g--~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 114 (175)
..+.|..|++|-- +| .+......+++.|.++||++++||++ -|.+.-.......+. +|+.++
T Consensus 25 ~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~GiGE~-------------~Da~aa 91 (210)
T COG2945 25 TPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGIGEL-------------EDAAAA 91 (210)
T ss_pred CCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCCcchH-------------HHHHHH
Confidence 4566777887742 22 22355778999999999999999998 565441122222222 899999
Q ss_pred HHHHHhcCC-Ce-EEEEEEeccHHHHHHhcc-CCCccEEEEecCCC
Q 030535 115 IAALKSKGV-SA-IGAAGFCWGGVVAAKLAS-SHDIQAAVVLHPGA 157 (175)
Q Consensus 115 ~~~l~~~~~-~~-i~v~G~S~GG~ia~~~a~-~~~v~~~v~~~p~~ 157 (175)
++|++++.. .+ ..+.|||||+.|+..+|. .+.+...++..|..
T Consensus 92 ldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e~~~~is~~p~~ 137 (210)
T COG2945 92 LDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPEILVFISILPPI 137 (210)
T ss_pred HHHHHhhCCCchhhhhcccchHHHHHHHHHHhcccccceeeccCCC
Confidence 999999843 33 468999999999999774 45666666555543
No 73
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.15 E-value=2.8e-10 Score=93.32 Aligned_cols=120 Identities=15% Similarity=0.281 Sum_probs=71.8
Q ss_pred eeCCeeEEEEccCC--CCCCeEEEEecCCCCCCcc------------hHHHHH---HHHHhCCCEEEeccCCC--CCCCC
Q 030535 26 QLGGLNTYVTGSGP--PDSKSAILLISDVFGYEAP------------LFRKLA---DKVAGAGFLVVAPDFFY--GDPIV 86 (175)
Q Consensus 26 ~~~~~~~~~~~p~~--~~~~~~vv~lhg~~g~~~~------------~~~~~a---~~la~~G~~vi~~D~~~--g~~~~ 86 (175)
.+++++.++..-.. ....|+||++||..+.... +|..+. ..|...+|+|+++|+++ +.+.
T Consensus 29 ~~~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~- 107 (379)
T PRK00175 29 VLPPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGST- 107 (379)
T ss_pred CcCCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCC-
Confidence 44556654431121 1235889999977665421 244443 13435689999999874 3221
Q ss_pred CCCC-------------chhhHHHHHHhcCCCcchhHHHHHHHHHHhcCCCe-EEEEEEeccHHHHHHhccC--CCccEE
Q 030535 87 DLNN-------------PQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVSA-IGAAGFCWGGVVAAKLASS--HDIQAA 150 (175)
Q Consensus 87 ~~~~-------------~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~-i~v~G~S~GG~ia~~~a~~--~~v~~~ 150 (175)
.+.. ...++..+ .+|+.+++ ++.+.++ +.++||||||.+++.+|.. .+|+++
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~l---~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~l 175 (379)
T PRK00175 108 GPSSINPDTGKPYGSDFPVITIRDW---------VRAQARLL---DALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSA 175 (379)
T ss_pred CCCCCCCCCCCcccCCCCcCCHHHH---------HHHHHHHH---HHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEE
Confidence 1110 01222222 14444444 4456778 5899999999999998853 489999
Q ss_pred EEecCCCC
Q 030535 151 VVLHPGAI 158 (175)
Q Consensus 151 v~~~p~~~ 158 (175)
|++++...
T Consensus 176 vl~~~~~~ 183 (379)
T PRK00175 176 LVIASSAR 183 (379)
T ss_pred EEECCCcc
Confidence 99987654
No 74
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.15 E-value=2e-09 Score=83.67 Aligned_cols=106 Identities=15% Similarity=0.247 Sum_probs=78.2
Q ss_pred CCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHh
Q 030535 42 SKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKS 120 (175)
Q Consensus 42 ~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~ 120 (175)
+..+||=+||..|++ ..++.+.+.|.+.|++++..+|| +|.+. .+.+........ ..-+.++++ +
T Consensus 34 ~~gTVv~~hGsPGSH-~DFkYi~~~l~~~~iR~I~iN~PGf~~t~-~~~~~~~~n~er---------~~~~~~ll~---~ 99 (297)
T PF06342_consen 34 PLGTVVAFHGSPGSH-NDFKYIRPPLDEAGIRFIGINYPGFGFTP-GYPDQQYTNEER---------QNFVNALLD---E 99 (297)
T ss_pred CceeEEEecCCCCCc-cchhhhhhHHHHcCeEEEEeCCCCCCCCC-CCcccccChHHH---------HHHHHHHHH---H
Confidence 445788899999998 68999999999999999999999 77654 333332222111 122333333 3
Q ss_pred cCC-CeEEEEEEeccHHHHHHhccCCCccEEEEecCCCCCcc
Q 030535 121 KGV-SAIGAAGFCWGGVVAAKLASSHDIQAAVVLHPGAITVD 161 (175)
Q Consensus 121 ~~~-~~i~v~G~S~GG~ia~~~a~~~~v~~~v~~~p~~~~~~ 161 (175)
.+. +++..+|||+|+-.|+.+|...++.++++++|....+.
T Consensus 100 l~i~~~~i~~gHSrGcenal~la~~~~~~g~~lin~~G~r~H 141 (297)
T PF06342_consen 100 LGIKGKLIFLGHSRGCENALQLAVTHPLHGLVLINPPGLRPH 141 (297)
T ss_pred cCCCCceEEEEeccchHHHHHHHhcCccceEEEecCCccccc
Confidence 344 58999999999999999987656789999999888764
No 75
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.13 E-value=8.9e-11 Score=90.38 Aligned_cols=140 Identities=19% Similarity=0.148 Sum_probs=92.3
Q ss_pred EeeCC--eeEEEEccCCC-CCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCC-Cchh-hHHHH
Q 030535 25 QQLGG--LNTYVTGSGPP-DSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLN-NPQF-DREAW 98 (175)
Q Consensus 25 ~~~~~--~~~~~~~p~~~-~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~-~~~~-~~~~~ 98 (175)
+..++ +.+|+..|... ++.|.||.+||..|.. ..+..+.. |+..||+|+.+|.| .|.++.... .... +...+
T Consensus 62 ~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~-g~~~~~l~-wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~ 139 (321)
T COG3458 62 TGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRG-GEWHDMLH-WAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGF 139 (321)
T ss_pred eccCCceEEEEEEeecccCCccceEEEEeeccCCC-CCcccccc-ccccceeEEEEecccCCCccccCCCCCCCCcCCce
Confidence 34455 45678777765 6789999999665543 23333333 56789999999998 554431111 0000 11112
Q ss_pred HHh--------cCCCcchhHHHHHHHHHHhc---CCCeEEEEEEeccHHHHHHhc-cCCCccEEEEecCCCCCccccccc
Q 030535 99 RKI--------HNTDKGYVDAKSVIAALKSK---GVSAIGAAGFCWGGVVAAKLA-SSHDIQAAVVLHPGAITVDDINGK 166 (175)
Q Consensus 99 ~~~--------~~~~~~~~d~~~~~~~l~~~---~~~~i~v~G~S~GG~ia~~~a-~~~~v~~~v~~~p~~~~~~~~~~~ 166 (175)
+.+ ..+.....|+..+++.+.+. +.+||++-|.|+||.+++..| .+++|+++++.+|.+.....+-++
T Consensus 140 mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~rik~~~~~~Pfl~df~r~i~~ 219 (321)
T COG3458 140 MTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDPRIKAVVADYPFLSDFPRAIEL 219 (321)
T ss_pred eEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcChhhhcccccccccccchhheee
Confidence 111 12234457788888888776 457999999999999999965 678999999999999876544443
No 76
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.11 E-value=1.1e-09 Score=103.63 Aligned_cols=107 Identities=13% Similarity=0.157 Sum_probs=70.4
Q ss_pred CCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHh
Q 030535 42 SKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKS 120 (175)
Q Consensus 42 ~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~ 120 (175)
.+++|||+||+.+.. ..|..+++.|.+ +|+|+++|++ +|.+. ........... .....+...+++. +.+++
T Consensus 1370 ~~~~vVllHG~~~s~-~~w~~~~~~L~~-~~rVi~~Dl~G~G~S~-~~~~~~~~~~~--~~~si~~~a~~l~---~ll~~ 1441 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTG-EDWIPIMKAISG-SARCISIDLPGHGGSK-IQNHAKETQTE--PTLSVELVADLLY---KLIEH 1441 (1655)
T ss_pred CCCeEEEECCCCCCH-HHHHHHHHHHhC-CCEEEEEcCCCCCCCC-Ccccccccccc--ccCCHHHHHHHHH---HHHHH
Confidence 457899999776665 678899999975 5999999999 77654 11110000000 0001111113333 34444
Q ss_pred cCCCeEEEEEEeccHHHHHHhccC--CCccEEEEecCC
Q 030535 121 KGVSAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPG 156 (175)
Q Consensus 121 ~~~~~i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~ 156 (175)
.+.+++.++||||||.+++.++.. ++|+++|++++.
T Consensus 1442 l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~ 1479 (1655)
T PLN02980 1442 ITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGS 1479 (1655)
T ss_pred hCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCC
Confidence 466799999999999999998854 489999988765
No 77
>PLN02442 S-formylglutathione hydrolase
Probab=99.10 E-value=2.9e-09 Score=84.06 Aligned_cols=128 Identities=16% Similarity=0.149 Sum_probs=73.7
Q ss_pred CCeeEEEEccCC--CCCCeEEEEecCCCCCCcchH---HHHHHHHHhCCCEEEeccCC-CCCCCCCCCC-------c---
Q 030535 28 GGLNTYVTGSGP--PDSKSAILLISDVFGYEAPLF---RKLADKVAGAGFLVVAPDFF-YGDPIVDLNN-------P--- 91 (175)
Q Consensus 28 ~~~~~~~~~p~~--~~~~~~vv~lhg~~g~~~~~~---~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~-------~--- 91 (175)
..++.+++.|.. ..+.|.|+++||+.+.. ..+ ..+.+.++.+||.|++||.. +|... .... .
T Consensus 30 ~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~-~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~-~~~~~~~~~~~~~~~ 107 (283)
T PLN02442 30 CSMTFSVYFPPASDSGKVPVLYWLSGLTCTD-ENFIQKSGAQRAAAARGIALVAPDTSPRGLNV-EGEADSWDFGVGAGF 107 (283)
T ss_pred CceEEEEEcCCcccCCCCCEEEEecCCCcCh-HHHHHhhhHHHHHhhcCeEEEecCCCCCCCCC-CCCccccccCCCcce
Confidence 346666765552 23679999999876654 333 23456777789999999976 44111 0000 0
Q ss_pred --hhhHHHHHHhcCCCcchhHHHHHHHHH-HhcCCCeEEEEEEeccHHHHHHhccC--CCccEEEEecCCC
Q 030535 92 --QFDREAWRKIHNTDKGYVDAKSVIAAL-KSKGVSAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPGA 157 (175)
Q Consensus 92 --~~~~~~~~~~~~~~~~~~d~~~~~~~l-~~~~~~~i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~~ 157 (175)
+.....|......+...+++...++.. ...+.++++++||||||..++.++.. ++++++++++|..
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 178 (283)
T PLN02442 108 YLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIA 178 (283)
T ss_pred eeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCcc
Confidence 000000000000011223444334333 22366789999999999999997743 4688888888875
No 78
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.09 E-value=2.3e-10 Score=86.36 Aligned_cols=91 Identities=21% Similarity=0.237 Sum_probs=63.1
Q ss_pred HHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHh---cCCCcchhHHHHHHHHHHhc---CCCeEEEEEEec
Q 030535 60 FRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKI---HNTDKGYVDAKSVIAALKSK---GVSAIGAAGFCW 133 (175)
Q Consensus 60 ~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~~~~~~l~~~---~~~~i~v~G~S~ 133 (175)
+....+.|+++||.|+.+|++.+.+. . .+|... ..-....+|+.++++++.++ +.+||+++|+|+
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~-----g----~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~ 73 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGY-----G----KDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSY 73 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSS-----H----HHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCcc-----c----hhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccc
Confidence 34668899999999999999844322 0 111111 11123348899999999887 357999999999
Q ss_pred cHHHHHHhcc-C-CCccEEEEecCCCCC
Q 030535 134 GGVVAAKLAS-S-HDIQAAVVLHPGAIT 159 (175)
Q Consensus 134 GG~ia~~~a~-~-~~v~~~v~~~p~~~~ 159 (175)
||.+++.++. . ++++++++.+|....
T Consensus 74 GG~~a~~~~~~~~~~f~a~v~~~g~~d~ 101 (213)
T PF00326_consen 74 GGYLALLAATQHPDRFKAAVAGAGVSDL 101 (213)
T ss_dssp HHHHHHHHHHHTCCGSSEEEEESE-SST
T ss_pred cccccchhhcccceeeeeeeccceecch
Confidence 9999999775 4 478999999987653
No 79
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.08 E-value=3.4e-09 Score=84.60 Aligned_cols=113 Identities=23% Similarity=0.166 Sum_probs=80.4
Q ss_pred eeEEEEcc--CCCCCCeEEEEecCCC---CCCcchH-HHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcC
Q 030535 30 LNTYVTGS--GPPDSKSAILLISDVF---GYEAPLF-RKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHN 103 (175)
Q Consensus 30 ~~~~~~~p--~~~~~~~~vv~lhg~~---g~~~~~~-~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~ 103 (175)
++..++.| ....+.|.||++|||. +.. ... ..++..++..|+.|+.+||+-.. . +.
T Consensus 64 ~~~~~y~p~~~~~~~~p~vly~HGGg~~~g~~-~~~~~~~~~~~~~~g~~vv~vdYrlaP-e----------------~~ 125 (312)
T COG0657 64 VPVRVYRPDRKAAATAPVVLYLHGGGWVLGSL-RTHDALVARLAAAAGAVVVSVDYRLAP-E----------------HP 125 (312)
T ss_pred eeEEEECCCCCCCCCCcEEEEEeCCeeeecCh-hhhHHHHHHHHHHcCCEEEecCCCCCC-C----------------CC
Confidence 55666765 3333579999999874 332 333 44555666679999999986321 1 12
Q ss_pred CCcchhHHHHHHHHHHhc------CCCeEEEEEEeccHHHHHHhcc---C---CCccEEEEecCCCCCc
Q 030535 104 TDKGYVDAKSVIAALKSK------GVSAIGAAGFCWGGVVAAKLAS---S---HDIQAAVVLHPGAITV 160 (175)
Q Consensus 104 ~~~~~~d~~~~~~~l~~~------~~~~i~v~G~S~GG~ia~~~a~---~---~~v~~~v~~~p~~~~~ 160 (175)
+...+.|+.++++|+.++ +.++|+++|+|.||.+++.++. + +...+.++++|.....
T Consensus 126 ~p~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~ 194 (312)
T COG0657 126 FPAALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLT 194 (312)
T ss_pred CCchHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCc
Confidence 233348899999999876 2579999999999999999773 2 3689999999987644
No 80
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.07 E-value=1.8e-09 Score=94.83 Aligned_cols=99 Identities=19% Similarity=0.223 Sum_probs=68.0
Q ss_pred CeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCC-Cc----hhhHHHHHH-------hcCCCcchh
Q 030535 43 KSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLN-NP----QFDREAWRK-------IHNTDKGYV 109 (175)
Q Consensus 43 ~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~-~~----~~~~~~~~~-------~~~~~~~~~ 109 (175)
.|.||++||..+.. ..|..+++.|+++||+|+++|++ ||.+..... +. ......++. +..+.+.+.
T Consensus 449 ~P~VVllHG~~g~~-~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~ 527 (792)
T TIGR03502 449 WPVVIYQHGITGAK-ENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSIL 527 (792)
T ss_pred CcEEEEeCCCCCCH-HHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHH
Confidence 46899999777664 68899999999999999999998 886521100 00 000001111 123455568
Q ss_pred HHHHHHHHHH------hc-------CCCeEEEEEEeccHHHHHHhc
Q 030535 110 DAKSVIAALK------SK-------GVSAIGAAGFCWGGVVAAKLA 142 (175)
Q Consensus 110 d~~~~~~~l~------~~-------~~~~i~v~G~S~GG~ia~~~a 142 (175)
|+..+...++ +. +..++.++||||||.++..++
T Consensus 528 Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~ 573 (792)
T TIGR03502 528 DLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFI 573 (792)
T ss_pred HHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHH
Confidence 8888877776 21 245899999999999999976
No 81
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.06 E-value=3.4e-09 Score=83.94 Aligned_cols=101 Identities=24% Similarity=0.311 Sum_probs=71.0
Q ss_pred CCeEEEEecCCCC-CCcchHHHHHHHHHhCCCEEEeccCCC-C-CCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHH
Q 030535 42 SKSAILLISDVFG-YEAPLFRKLADKVAGAGFLVVAPDFFY-G-DPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAAL 118 (175)
Q Consensus 42 ~~~~vv~lhg~~g-~~~~~~~~~a~~la~~G~~vi~~D~~~-g-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l 118 (175)
..|.||++||..| .+.++.+.+++.+.++||.++++|+|+ + .+.. ... ....-..+|+..+++++
T Consensus 74 ~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~-~p~-----------~yh~G~t~D~~~~l~~l 141 (345)
T COG0429 74 KKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANT-SPR-----------LYHSGETEDIRFFLDWL 141 (345)
T ss_pred CCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCccc-Ccc-----------eecccchhHHHHHHHHH
Confidence 5589999999876 344678899999999999999999983 3 2220 110 00111128999999999
Q ss_pred Hhc-CCCeEEEEEEeccH-HHHHHhcc---CCCccEEEEec
Q 030535 119 KSK-GVSAIGAAGFCWGG-VVAAKLAS---SHDIQAAVVLH 154 (175)
Q Consensus 119 ~~~-~~~~i~v~G~S~GG-~ia~~~a~---~~~v~~~v~~~ 154 (175)
+++ ...++..+|+|+|| +++..++. +..+.+++.++
T Consensus 142 ~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs 182 (345)
T COG0429 142 KARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVS 182 (345)
T ss_pred HHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeee
Confidence 986 45699999999999 55555553 34566655444
No 82
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.06 E-value=2.3e-09 Score=97.68 Aligned_cols=120 Identities=15% Similarity=0.164 Sum_probs=76.9
Q ss_pred EeeCCeeEEEEccCCC-----CCCeEEEEecCCCCCCcchHHH-----HHHHHHhCCCEEEeccCCCCCCCCCCC-Cchh
Q 030535 25 QQLGGLNTYVTGSGPP-----DSKSAILLISDVFGYEAPLFRK-----LADKVAGAGFLVVAPDFFYGDPIVDLN-NPQF 93 (175)
Q Consensus 25 ~~~~~~~~~~~~p~~~-----~~~~~vv~lhg~~g~~~~~~~~-----~a~~la~~G~~vi~~D~~~g~~~~~~~-~~~~ 93 (175)
-+.+.++.+.+.|..+ ..+++||++||+... ...|+. +.+.|+++||+|+++|+ |.+. .+. ....
T Consensus 44 ~~~~~~~l~~y~~~~~~~~~~~~~~plllvhg~~~~-~~~~d~~~~~s~v~~L~~~g~~v~~~d~--G~~~-~~~~~~~~ 119 (994)
T PRK07868 44 ESVPMYRLRRYFPPDNRPGQPPVGPPVLMVHPMMMS-ADMWDVTRDDGAVGILHRAGLDPWVIDF--GSPD-KVEGGMER 119 (994)
T ss_pred EEcCcEEEEEeCCCCccccccCCCCcEEEECCCCCC-ccceecCCcccHHHHHHHCCCEEEEEcC--CCCC-hhHcCccC
Confidence 3556677777755432 245889999966443 344544 48999999999999994 5443 111 1112
Q ss_pred hHHHHHHhcCCCcchhHHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhcc-C--CCccEEEEecCCC
Q 030535 94 DREAWRKIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLAS-S--HDIQAAVVLHPGA 157 (175)
Q Consensus 94 ~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a~-~--~~v~~~v~~~p~~ 157 (175)
++.++. .++.++++.+++...+++.++||||||.+++.++. . ++|+.+|++....
T Consensus 120 ~l~~~i---------~~l~~~l~~v~~~~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~ 177 (994)
T PRK07868 120 NLADHV---------VALSEAIDTVKDVTGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPV 177 (994)
T ss_pred CHHHHH---------HHHHHHHHHHHHhhCCceEEEEEChhHHHHHHHHHhcCCCccceEEEEeccc
Confidence 222221 33455555554444468999999999999998763 3 3799998766553
No 83
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.06 E-value=3.7e-09 Score=81.06 Aligned_cols=114 Identities=19% Similarity=0.152 Sum_probs=79.9
Q ss_pred eeEEEEccCCCCCCeEEEEecCCCCCCcchHHHHHHHHHhC-CCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcc
Q 030535 30 LNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGA-GFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKG 107 (175)
Q Consensus 30 ~~~~~~~p~~~~~~~~vv~lhg~~g~~~~~~~~~a~~la~~-G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (175)
+.+.+.+|. ....+.+|+.||- ..+...+..+...|..+ .++++.+||. +|.+.-.+.+. ..
T Consensus 48 ~~~~y~~~~-~~~~~~lly~hGN-a~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~--------------n~ 111 (258)
T KOG1552|consen 48 IVCMYVRPP-EAAHPTLLYSHGN-AADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSER--------------NL 111 (258)
T ss_pred EEEEEEcCc-cccceEEEEcCCc-ccchHHHHHHHHHHhhcccceEEEEecccccccCCCcccc--------------cc
Confidence 334444322 2345889999955 33334455566666653 7999999998 67654122221 11
Q ss_pred hhHHHHHHHHHHhcC--CCeEEEEEEeccHHHHHHhccCCCccEEEEecCCCCC
Q 030535 108 YVDAKSVIAALKSKG--VSAIGAAGFCWGGVVAAKLASSHDIQAAVVLHPGAIT 159 (175)
Q Consensus 108 ~~d~~~~~~~l~~~~--~~~i~v~G~S~GG~ia~~~a~~~~v~~~v~~~p~~~~ 159 (175)
.+|+.++.+||+++. .++|+++|+|+|...++.+|...++.++|+.+|-...
T Consensus 112 y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~~~alVL~SPf~S~ 165 (258)
T KOG1552|consen 112 YADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYPLAAVVLHSPFTSG 165 (258)
T ss_pred hhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCCcceEEEeccchhh
Confidence 299999999999874 5799999999999999998865349999999987654
No 84
>PRK11460 putative hydrolase; Provisional
Probab=99.06 E-value=4.2e-09 Score=80.85 Aligned_cols=111 Identities=14% Similarity=0.089 Sum_probs=65.1
Q ss_pred CCCCeEEEEecCCCCCCcchHHHHHHHHHhCCC--EEEeccCCCCCCCCCCCCchhhHHHHHHhcC---------CCcch
Q 030535 40 PDSKSAILLISDVFGYEAPLFRKLADKVAGAGF--LVVAPDFFYGDPIVDLNNPQFDREAWRKIHN---------TDKGY 108 (175)
Q Consensus 40 ~~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~--~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~---------~~~~~ 108 (175)
..+.|.||++||..+. ...+..+++.|+..++ .++.|+-+..... ... ..|+.... .....
T Consensus 13 ~~~~~~vIlLHG~G~~-~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~-~~g------~~W~~~~~~~~~~~~~~~~~~~ 84 (232)
T PRK11460 13 KPAQQLLLLFHGVGDN-PVAMGEIGSWFAPAFPDALVVSVGGPEPSGN-GAG------RQWFSVQGITEDNRQARVAAIM 84 (232)
T ss_pred CCCCcEEEEEeCCCCC-hHHHHHHHHHHHHHCCCCEEECCCCCCCcCC-CCC------cccccCCCCCccchHHHHHHHH
Confidence 3456889999966555 4778999999988764 5555553210000 000 11211100 01111
Q ss_pred hHHHHHHHHHHhc-C--CCeEEEEEEeccHHHHHHhc-cCC-CccEEEEecCCCC
Q 030535 109 VDAKSVIAALKSK-G--VSAIGAAGFCWGGVVAAKLA-SSH-DIQAAVVLHPGAI 158 (175)
Q Consensus 109 ~d~~~~~~~l~~~-~--~~~i~v~G~S~GG~ia~~~a-~~~-~v~~~v~~~p~~~ 158 (175)
..+.+.++++.++ + .++|+++|||+||.+++.++ ..+ .+.+++++++.+.
T Consensus 85 ~~l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~ 139 (232)
T PRK11460 85 PTFIETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYA 139 (232)
T ss_pred HHHHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccc
Confidence 3344455555444 2 35899999999999999977 344 4566778877643
No 85
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.04 E-value=1.2e-09 Score=82.12 Aligned_cols=94 Identities=22% Similarity=0.248 Sum_probs=67.0
Q ss_pred EEEecCCC---CCCcchHHHHHHHHHh-CCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhc
Q 030535 46 ILLISDVF---GYEAPLFRKLADKVAG-AGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK 121 (175)
Q Consensus 46 vv~lhg~~---g~~~~~~~~~a~~la~-~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~ 121 (175)
||++|||. +.. .....++..|++ .|+.|+.+||+-. |. ..++...+|+.++++|+.++
T Consensus 1 v~~~HGGg~~~g~~-~~~~~~~~~la~~~g~~v~~~~Yrl~-p~----------------~~~p~~~~D~~~a~~~l~~~ 62 (211)
T PF07859_consen 1 VVYIHGGGWVMGSK-ESHWPFAARLAAERGFVVVSIDYRLA-PE----------------APFPAALEDVKAAYRWLLKN 62 (211)
T ss_dssp EEEE--STTTSCGT-TTHHHHHHHHHHHHTSEEEEEE---T-TT----------------SSTTHHHHHHHHHHHHHHHT
T ss_pred CEEECCcccccCCh-HHHHHHHHHHHhhccEEEEEeecccc-cc----------------ccccccccccccceeeeccc
Confidence 78999875 332 445667888876 8999999999732 11 11222338999999999886
Q ss_pred ------CCCeEEEEEEeccHHHHHHhcc---C---CCccEEEEecCCC
Q 030535 122 ------GVSAIGAAGFCWGGVVAAKLAS---S---HDIQAAVVLHPGA 157 (175)
Q Consensus 122 ------~~~~i~v~G~S~GG~ia~~~a~---~---~~v~~~v~~~p~~ 157 (175)
+.++|+++|+|.||.+++.++. + +.++++++++|..
T Consensus 63 ~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~ 110 (211)
T PF07859_consen 63 ADKLGIDPERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWT 110 (211)
T ss_dssp HHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHS
T ss_pred cccccccccceEEeecccccchhhhhhhhhhhhcccchhhhhcccccc
Confidence 2569999999999999999773 1 3599999999975
No 86
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.03 E-value=4.1e-09 Score=82.63 Aligned_cols=114 Identities=19% Similarity=0.194 Sum_probs=74.2
Q ss_pred eEEEEcc--CCCCCCeEEEEecCCCCCCcchHHHHH----------HHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHH
Q 030535 31 NTYVTGS--GPPDSKSAILLISDVFGYEAPLFRKLA----------DKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREA 97 (175)
Q Consensus 31 ~~~~~~p--~~~~~~~~vv~lhg~~g~~~~~~~~~a----------~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~ 97 (175)
..-+++| ....+.|+||..| .++.......... ..|+++||+|+..|.| .|.+. ..-...
T Consensus 6 ~adv~~P~~~~~~~~P~il~~t-pY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~-G~~~~~----- 78 (272)
T PF02129_consen 6 AADVYRPGADGGGPFPVILTRT-PYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSE-GEFDPM----- 78 (272)
T ss_dssp EEEEEEE--TTSSSEEEEEEEE-SSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS--S-B-TT-----
T ss_pred EEEEEecCCCCCCcccEEEEcc-CcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCC-CccccC-----
Confidence 3456667 4455778888887 5553321111111 1399999999999998 55543 111100
Q ss_pred HHHhcCCCcchhHHHHHHHHHHhcCC--CeEEEEEEeccHHHHHHhcc--CCCccEEEEecCCC
Q 030535 98 WRKIHNTDKGYVDAKSVIAALKSKGV--SAIGAAGFCWGGVVAAKLAS--SHDIQAAVVLHPGA 157 (175)
Q Consensus 98 ~~~~~~~~~~~~d~~~~~~~l~~~~~--~~i~v~G~S~GG~ia~~~a~--~~~v~~~v~~~p~~ 157 (175)
......|..++|+|+.++.. .+|+++|.|++|.+.+.+|. .+++++++...+..
T Consensus 79 ------~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~ 136 (272)
T PF02129_consen 79 ------SPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWS 136 (272)
T ss_dssp ------SHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-S
T ss_pred ------ChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCC
Confidence 11223899999999999853 59999999999999999775 37899999887654
No 87
>PRK10115 protease 2; Provisional
Probab=99.01 E-value=5.5e-09 Score=91.69 Aligned_cols=112 Identities=13% Similarity=0.098 Sum_probs=80.3
Q ss_pred CCCeEEEEecCCCCCCc-chHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHH
Q 030535 41 DSKSAILLISDVFGYEA-PLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALK 119 (175)
Q Consensus 41 ~~~~~vv~lhg~~g~~~-~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 119 (175)
++.|.||++||+++... ..+....+.|+++||.|+.+++++|... ... ......+. .-....+|+.+++++|.
T Consensus 443 ~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~-G~~--w~~~g~~~---~k~~~~~D~~a~~~~Lv 516 (686)
T PRK10115 443 GHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGEL-GQQ--WYEDGKFL---KKKNTFNDYLDACDALL 516 (686)
T ss_pred CCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCcc-CHH--HHHhhhhh---cCCCcHHHHHHHHHHHH
Confidence 45699999999987542 4466667789999999999999855433 111 11111111 11244589999999999
Q ss_pred hcC---CCeEEEEEEeccHHHHHHhc-cC-CCccEEEEecCCCC
Q 030535 120 SKG---VSAIGAAGFCWGGVVAAKLA-SS-HDIQAAVVLHPGAI 158 (175)
Q Consensus 120 ~~~---~~~i~v~G~S~GG~ia~~~a-~~-~~v~~~v~~~p~~~ 158 (175)
+++ .++++++|.|.||.++..++ .. ++.+|+|+..|..-
T Consensus 517 ~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D 560 (686)
T PRK10115 517 KLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVD 560 (686)
T ss_pred HcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchh
Confidence 885 46999999999999999866 44 57888888877654
No 88
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=98.95 E-value=1e-08 Score=83.69 Aligned_cols=105 Identities=20% Similarity=0.317 Sum_probs=73.7
Q ss_pred CCeEEEEecCCCCCC-cchHHHHHHHHHhCCCEEEeccCCC-CCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHH
Q 030535 42 SKSAILLISDVFGYE-APLFRKLADKVAGAGFLVVAPDFFY-GDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALK 119 (175)
Q Consensus 42 ~~~~vv~lhg~~g~~-~~~~~~~a~~la~~G~~vi~~D~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 119 (175)
..|.||++||..|.. ..+.+.++..+.++||.|++++.++ +... ...... ...--..|+.+++++++
T Consensus 124 ~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~--LtTpr~---------f~ag~t~Dl~~~v~~i~ 192 (409)
T KOG1838|consen 124 TDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSK--LTTPRL---------FTAGWTEDLREVVNHIK 192 (409)
T ss_pred CCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCc--cCCCce---------eecCCHHHHHHHHHHHH
Confidence 569999999887643 4667889999999999999999883 3221 111110 00111289999999999
Q ss_pred hcCC-CeEEEEEEeccHHHHHHh-cc---CCCc-cEEEEecCCC
Q 030535 120 SKGV-SAIGAAGFCWGGVVAAKL-AS---SHDI-QAAVVLHPGA 157 (175)
Q Consensus 120 ~~~~-~~i~v~G~S~GG~ia~~~-a~---~~~v-~~~v~~~p~~ 157 (175)
++.+ .++..+|+||||.+.+.| +. +..+ .|+++.+|.-
T Consensus 193 ~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 193 KRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWD 236 (409)
T ss_pred HhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccch
Confidence 9854 589999999999999985 43 2344 4445555553
No 89
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.95 E-value=5.8e-09 Score=66.89 Aligned_cols=51 Identities=24% Similarity=0.323 Sum_probs=39.6
Q ss_pred EEEccCCCCCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCC
Q 030535 33 YVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPI 85 (175)
Q Consensus 33 ~~~~p~~~~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~ 85 (175)
..+.|..+ ++..|+++| |++.+...+..+|+.|+++||.|+++|++ +|.+.
T Consensus 7 ~~w~p~~~-~k~~v~i~H-G~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~ 58 (79)
T PF12146_consen 7 RRWKPENP-PKAVVVIVH-GFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSE 58 (79)
T ss_pred EEecCCCC-CCEEEEEeC-CcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCC
Confidence 44433333 567777777 66766688999999999999999999999 88765
No 90
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.94 E-value=4e-09 Score=84.94 Aligned_cols=97 Identities=22% Similarity=0.254 Sum_probs=69.8
Q ss_pred CCeEEEEecCCCCCCcchHHHHHHHHHhC-CCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHH
Q 030535 42 SKSAILLISDVFGYEAPLFRKLADKVAGA-GFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALK 119 (175)
Q Consensus 42 ~~~~vv~lhg~~g~~~~~~~~~a~~la~~-G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 119 (175)
.+++||++||+.+ +...|+.....|... |+.|+++|++ +|.+...+........ ..+..+.+++.
T Consensus 57 ~~~pvlllHGF~~-~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~------------~~v~~i~~~~~ 123 (326)
T KOG1454|consen 57 DKPPVLLLHGFGA-SSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLR------------ELVELIRRFVK 123 (326)
T ss_pred CCCcEEEeccccC-CcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehh------------HHHHHHHHHHH
Confidence 6789999997666 457889999988776 6999999998 5522201222222222 33555666666
Q ss_pred hcCCCeEEEEEEeccHHHHHHhccC--CCccEEE
Q 030535 120 SKGVSAIGAAGFCWGGVVAAKLASS--HDIQAAV 151 (175)
Q Consensus 120 ~~~~~~i~v~G~S~GG~ia~~~a~~--~~v~~~v 151 (175)
+....++.++|||+||.+++.+|.. +.|+.++
T Consensus 124 ~~~~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv 157 (326)
T KOG1454|consen 124 EVFVEPVSLVGHSLGGIVALKAAAYYPETVDSLV 157 (326)
T ss_pred hhcCcceEEEEeCcHHHHHHHHHHhCccccccee
Confidence 6666689999999999999998854 4788888
No 91
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.92 E-value=3e-08 Score=79.85 Aligned_cols=119 Identities=18% Similarity=0.232 Sum_probs=84.4
Q ss_pred eeCCeeEEEEccCC--C-CCCeEEEEecCCC---C-CCcchHHHHHHHHHhC-CCEEEeccCCCCCCCCCCCCchhhHHH
Q 030535 26 QLGGLNTYVTGSGP--P-DSKSAILLISDVF---G-YEAPLFRKLADKVAGA-GFLVVAPDFFYGDPIVDLNNPQFDREA 97 (175)
Q Consensus 26 ~~~~~~~~~~~p~~--~-~~~~~vv~lhg~~---g-~~~~~~~~~a~~la~~-G~~vi~~D~~~g~~~~~~~~~~~~~~~ 97 (175)
+..++...+++|.. . ...|.||++|||. + .+...+..++.+++++ +..|+.+|||-- |.
T Consensus 70 ~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLA-PE------------ 136 (336)
T KOG1515|consen 70 PFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLA-PE------------ 136 (336)
T ss_pred CCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccC-CC------------
Confidence 34666766666554 2 4679999999875 2 2346788899999654 999999998622 11
Q ss_pred HHHhcCCCcchhHHHHHHHHHHhc-------CCCeEEEEEEeccHHHHHHhcc--------CCCccEEEEecCCCCCcc
Q 030535 98 WRKIHNTDKGYVDAKSVIAALKSK-------GVSAIGAAGFCWGGVVAAKLAS--------SHDIQAAVVLHPGAITVD 161 (175)
Q Consensus 98 ~~~~~~~~~~~~d~~~~~~~l~~~-------~~~~i~v~G~S~GG~ia~~~a~--------~~~v~~~v~~~p~~~~~~ 161 (175)
+.++...+|.-.++.|+.++ |.++++|+|-|.||.||..+|. ...+++.|+++|.....+
T Consensus 137 ----h~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~ 211 (336)
T KOG1515|consen 137 ----HPFPAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTD 211 (336)
T ss_pred ----CCCCccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCC
Confidence 11122225666666666553 5679999999999999998762 147999999999998654
No 92
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.91 E-value=1.4e-08 Score=77.41 Aligned_cols=116 Identities=18% Similarity=0.218 Sum_probs=68.6
Q ss_pred eeEEEEccCCCC--CCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-C-CCCCCCCCCchhhHHHHHHhcCCC
Q 030535 30 LNTYVTGSGPPD--SKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-Y-GDPIVDLNNPQFDREAWRKIHNTD 105 (175)
Q Consensus 30 ~~~~~~~p~~~~--~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~-g~~~~~~~~~~~~~~~~~~~~~~~ 105 (175)
++.|...|+.+. ..+.||+.. |++.....+..+|++|+..||+|+++|.- | |.+. .. + ......
T Consensus 15 I~vwet~P~~~~~~~~~tiliA~-Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSs-G~------I----~eftms 82 (294)
T PF02273_consen 15 IRVWETRPKNNEPKRNNTILIAP-GFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSS-GD------I----NEFTMS 82 (294)
T ss_dssp EEEEEE---TTS---S-EEEEE--TT-GGGGGGHHHHHHHHTTT--EEEE---B------------------------HH
T ss_pred EEEeccCCCCCCcccCCeEEEec-chhHHHHHHHHHHHHHhhCCeEEEeccccccccCCC-CC------h----hhcchH
Confidence 455666666543 335666666 77766678899999999999999999965 3 3322 01 1 011222
Q ss_pred cchhHHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhccCCCccEEEEecCCC
Q 030535 106 KGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSHDIQAAVVLHPGA 157 (175)
Q Consensus 106 ~~~~d~~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a~~~~v~~~v~~~p~~ 157 (175)
....++..+++|++++|..+++++.-|..|.+|.+.|.+..+.-+|..-+..
T Consensus 83 ~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i~lsfLitaVGVV 134 (294)
T PF02273_consen 83 IGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADINLSFLITAVGVV 134 (294)
T ss_dssp HHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS--SEEEEES--S
T ss_pred HhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhccCcceEEEEeeee
Confidence 3348899999999999999999999999999999998876777777666543
No 93
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.91 E-value=2.9e-09 Score=80.98 Aligned_cols=88 Identities=18% Similarity=0.230 Sum_probs=53.3
Q ss_pred eEEEEecCCCCCCcchHHHHHHHHHhCCCE---EEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHh
Q 030535 44 SAILLISDVFGYEAPLFRKLADKVAGAGFL---VVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKS 120 (175)
Q Consensus 44 ~~vv~lhg~~g~~~~~~~~~a~~la~~G~~---vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~ 120 (175)
.+|||+||.++.....|..+++.|.++||. +++++|-.+... . .. .... ...+..+++.++++.+++
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~---~----~~-~~~~--~~~~~~~~l~~fI~~Vl~ 71 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGS---P----SV-QNAH--MSCESAKQLRAFIDAVLA 71 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHH---T----HH-HHHH--B-HHHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCC---C----cc-cccc--cchhhHHHHHHHHHHHHH
Confidence 369999988775557889999999999999 799996322211 0 01 1110 111222567777777775
Q ss_pred c-CCCeEEEEEEeccHHHHHHhc
Q 030535 121 K-GVSAIGAAGFCWGGVVAAKLA 142 (175)
Q Consensus 121 ~-~~~~i~v~G~S~GG~ia~~~a 142 (175)
. +. +|-|+||||||.++..+.
T Consensus 72 ~TGa-kVDIVgHS~G~~iaR~yi 93 (219)
T PF01674_consen 72 YTGA-KVDIVGHSMGGTIARYYI 93 (219)
T ss_dssp HHT---EEEEEETCHHHHHHHHH
T ss_pred hhCC-EEEEEEcCCcCHHHHHHH
Confidence 4 77 999999999999998866
No 94
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.89 E-value=1e-08 Score=77.52 Aligned_cols=102 Identities=23% Similarity=0.308 Sum_probs=76.4
Q ss_pred EEEEccCCCCCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCc---hhhHHHHHHhcCCCcc
Q 030535 32 TYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNP---QFDREAWRKIHNTDKG 107 (175)
Q Consensus 32 ~~~~~p~~~~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~---~~~~~~~~~~~~~~~~ 107 (175)
++.+ ...++.+..|++-+.+|.....++.+|+.++..||.|+++||+ .|++. +... ...+.+|..
T Consensus 20 ~~~~--pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~--p~~~~~~~~~~~DwA~------- 88 (281)
T COG4757 20 GQRF--PADGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSR--PASLSGSQWRYLDWAR------- 88 (281)
T ss_pred cccc--cCCCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCC--ccccccCccchhhhhh-------
Confidence 3445 2334556677777888887778999999999999999999998 66655 3322 244556653
Q ss_pred hhHHHHHHHHHHhc-CCCeEEEEEEeccHHHHHHhccCC
Q 030535 108 YVDAKSVIAALKSK-GVSAIGAAGFCWGGVVAAKLASSH 145 (175)
Q Consensus 108 ~~d~~~~~~~l~~~-~~~~i~v~G~S~GG~ia~~~a~~~ 145 (175)
.|+.++++++++. .-.+...+||||||.+.-.+...+
T Consensus 89 -~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~~~~ 126 (281)
T COG4757 89 -LDFPAALAALKKALPGHPLYFVGHSFGGQALGLLGQHP 126 (281)
T ss_pred -cchHHHHHHHHhhCCCCceEEeeccccceeecccccCc
Confidence 7899999999874 345899999999999888777655
No 95
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.88 E-value=5.2e-09 Score=82.24 Aligned_cols=120 Identities=18% Similarity=0.281 Sum_probs=73.9
Q ss_pred CCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCC----CCCCchhhHHHHHHhcCC-----------
Q 030535 41 DSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIV----DLNNPQFDREAWRKIHNT----------- 104 (175)
Q Consensus 41 ~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~----~~~~~~~~~~~~~~~~~~----------- 104 (175)
++.|.|||-||..|. ...|..++-.||++||.|.++.+| ....++ +......-..+|++...+
T Consensus 116 ~k~PvvvFSHGLggs-Rt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irN 194 (399)
T KOG3847|consen 116 DKYPVVVFSHGLGGS-RTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRN 194 (399)
T ss_pred CCccEEEEecccccc-hhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeC
Confidence 356888888855554 578999999999999999999987 432221 000000001122211111
Q ss_pred ---CcchhHHHHHHHHHHhc------------------------CCCeEEEEEEeccHHHHHHh-ccCCCccEEEEecCC
Q 030535 105 ---DKGYVDAKSVIAALKSK------------------------GVSAIGAAGFCWGGVVAAKL-ASSHDIQAAVVLHPG 156 (175)
Q Consensus 105 ---~~~~~d~~~~~~~l~~~------------------------~~~~i~v~G~S~GG~ia~~~-a~~~~v~~~v~~~p~ 156 (175)
.+...++..+++.+++. +..+++|+||||||.+++.. +.+.+.++.|++...
T Consensus 195 eqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t~FrcaI~lD~W 274 (399)
T KOG3847|consen 195 EQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHTDFRCAIALDAW 274 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccccceeeeeeeeee
Confidence 11123333444444331 22579999999999999984 456799999998877
Q ss_pred CCCcc
Q 030535 157 AITVD 161 (175)
Q Consensus 157 ~~~~~ 161 (175)
+.+-+
T Consensus 275 M~Pl~ 279 (399)
T KOG3847|consen 275 MFPLD 279 (399)
T ss_pred ecccc
Confidence 76543
No 96
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.88 E-value=8.7e-09 Score=82.83 Aligned_cols=106 Identities=22% Similarity=0.257 Sum_probs=69.7
Q ss_pred eeEEEEccCCCC------CCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCCCCCC-CCCCCCch---hhHHHHH
Q 030535 30 LNTYVTGSGPPD------SKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDP-IVDLNNPQ---FDREAWR 99 (175)
Q Consensus 30 ~~~~~~~p~~~~------~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~~g~~-~~~~~~~~---~~~~~~~ 99 (175)
++..++.|.... ..|.|++-| +.|.....+.++++.|++.||.|.++|++.-+. ..+..... ..-..|.
T Consensus 52 ~~v~~~~p~~~~~~~~~~~~Plvvlsh-G~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~ 130 (365)
T COG4188 52 RPVDLRLPQGGTGTVALYLLPLVVLSH-GSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWW 130 (365)
T ss_pred cccceeccCCCccccccCcCCeEEecC-CCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhh
Confidence 444555445432 346566666 666556889999999999999999999873211 10011000 1111232
Q ss_pred HhcCCCcchhHHHHHHHHHHhc----------CCCeEEEEEEeccHHHHHHhc
Q 030535 100 KIHNTDKGYVDAKSVIAALKSK----------GVSAIGAAGFCWGGVVAAKLA 142 (175)
Q Consensus 100 ~~~~~~~~~~d~~~~~~~l~~~----------~~~~i~v~G~S~GG~ia~~~a 142 (175)
+...|+..++++|.+. +..+|+++|||+||..++..+
T Consensus 131 ------erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~la 177 (365)
T COG4188 131 ------ERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELA 177 (365)
T ss_pred ------cccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhc
Confidence 3448888888888765 246999999999999999865
No 97
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.87 E-value=6.1e-08 Score=82.34 Aligned_cols=142 Identities=13% Similarity=0.108 Sum_probs=91.3
Q ss_pred CcccccCCCCCCCCCCccceEEE-eeCCeeEEEEccCCC-CCCeEEEEecCCCCCCcc-----hHHHHHHHHHhCCCEEE
Q 030535 3 GSQCFENPPKLSPGSGCGAGTVQ-QLGGLNTYVTGSGPP-DSKSAILLISDVFGYEAP-----LFRKLADKVAGAGFLVV 75 (175)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~-~~~~~vv~lhg~~g~~~~-----~~~~~a~~la~~G~~vi 75 (175)
.+++....|++=...+.-.|..+ +-+.+..+-+.|..+ .-+.+||+++.+- +... --+.+.++|.++||.|+
T Consensus 173 ~~~~d~~aF~vG~~~a~TPg~VV~~n~l~eLiqY~P~te~v~~~PLLIVPp~I-NK~YIlDL~P~~SlVr~lv~qG~~Vf 251 (560)
T TIGR01839 173 PSQVNMDAFEVGKNLATTEGAVVFRNEVLELIQYKPITEQQHARPLLVVPPQI-NKFYIFDLSPEKSFVQYCLKNQLQVF 251 (560)
T ss_pred CCCCChhhcccCCCCCCCCCceeEECCceEEEEeCCCCCCcCCCcEEEechhh-hhhheeecCCcchHHHHHHHcCCeEE
Confidence 35666667665333223333333 345567777755543 2346688888554 2211 12679999999999999
Q ss_pred eccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhc-CCCeEEEEEEeccHHHHHH----hc-cC-C-Cc
Q 030535 76 APDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK-GVSAIGAAGFCWGGVVAAK----LA-SS-H-DI 147 (175)
Q Consensus 76 ~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~-~~~~i~v~G~S~GG~ia~~----~a-~~-~-~v 147 (175)
++|+. +|. ..+.+..+.+++ +.+.++++.+++. |..+|.++|||+||.+++. ++ .. + +|
T Consensus 252 lIsW~--nP~--~~~r~~~ldDYv---------~~i~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V 318 (560)
T TIGR01839 252 IISWR--NPD--KAHREWGLSTYV---------DALKEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKV 318 (560)
T ss_pred EEeCC--CCC--hhhcCCCHHHHH---------HHHHHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCce
Confidence 99974 333 222223344444 5688888888875 6779999999999999996 44 32 3 69
Q ss_pred cEEEEecCCCC
Q 030535 148 QAAVVLHPGAI 158 (175)
Q Consensus 148 ~~~v~~~p~~~ 158 (175)
+.++++...+.
T Consensus 319 ~sltllatplD 329 (560)
T TIGR01839 319 NSLTYLVSLLD 329 (560)
T ss_pred eeEEeeecccc
Confidence 99987765544
No 98
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.81 E-value=1.4e-08 Score=80.30 Aligned_cols=98 Identities=20% Similarity=0.307 Sum_probs=68.5
Q ss_pred CCCeEEEEecCCCCCCcchHHHHHHHHHhC-CCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHH
Q 030535 41 DSKSAILLISDVFGYEAPLFRKLADKVAGA-GFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAAL 118 (175)
Q Consensus 41 ~~~~~vv~lhg~~g~~~~~~~~~a~~la~~-G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l 118 (175)
...|++|++||..|.. .+|+.++..|++. |-.+++.|.+ +|.+. ... .++.....+|+..+++..
T Consensus 50 ~~~Pp~i~lHGl~GS~-~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp-~~~-----------~h~~~~ma~dv~~Fi~~v 116 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSK-ENWRSVAKNLSRKLGRDVYAVDVRNHGSSP-KIT-----------VHNYEAMAEDVKLFIDGV 116 (315)
T ss_pred CCCCceEEecccccCC-CCHHHHHHHhcccccCceEEEecccCCCCc-ccc-----------ccCHHHHHHHHHHHHHHc
Confidence 4678999999999987 7899999999987 8899999999 88643 111 112222337777777777
Q ss_pred Hhc-CCCeEEEEEEeccHHHHHHhc--cC--CCccEEEE
Q 030535 119 KSK-GVSAIGAAGFCWGGVVAAKLA--SS--HDIQAAVV 152 (175)
Q Consensus 119 ~~~-~~~~i~v~G~S~GG~ia~~~a--~~--~~v~~~v~ 152 (175)
+.. ...++.++|||||| +..+++ .. ..+..+|.
T Consensus 117 ~~~~~~~~~~l~GHsmGG-~~~~m~~t~~~p~~~~rliv 154 (315)
T KOG2382|consen 117 GGSTRLDPVVLLGHSMGG-VKVAMAETLKKPDLIERLIV 154 (315)
T ss_pred ccccccCCceecccCcch-HHHHHHHHHhcCcccceeEE
Confidence 643 24689999999999 444443 22 34554443
No 99
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.76 E-value=1e-07 Score=70.45 Aligned_cols=100 Identities=18% Similarity=0.308 Sum_probs=76.1
Q ss_pred eEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhc-C
Q 030535 44 SAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK-G 122 (175)
Q Consensus 44 ~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~-~ 122 (175)
-.+||+.|=.|+. ..-..+++.|+++|+.|+.+|-. .=+....++++...|+..+++...++ +
T Consensus 3 t~~v~~SGDgGw~-~~d~~~a~~l~~~G~~VvGvdsl---------------~Yfw~~rtP~~~a~Dl~~~i~~y~~~w~ 66 (192)
T PF06057_consen 3 TLAVFFSGDGGWR-DLDKQIAEALAKQGVPVVGVDSL---------------RYFWSERTPEQTAADLARIIRHYRARWG 66 (192)
T ss_pred EEEEEEeCCCCch-hhhHHHHHHHHHCCCeEEEechH---------------HHHhhhCCHHHHHHHHHHHHHHHHHHhC
Confidence 3578888777776 56678999999999999999932 11112344455568999999988877 6
Q ss_pred CCeEEEEEEeccHHHHHHhc-c-----CCCccEEEEecCCCCC
Q 030535 123 VSAIGAAGFCWGGVVAAKLA-S-----SHDIQAAVVLHPGAIT 159 (175)
Q Consensus 123 ~~~i~v~G~S~GG~ia~~~a-~-----~~~v~~~v~~~p~~~~ 159 (175)
.+++.|+|+|||+-+.-... + ..+|+.++++.|....
T Consensus 67 ~~~vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~~ 109 (192)
T PF06057_consen 67 RKRVVLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPSTTA 109 (192)
T ss_pred CceEEEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccCCcc
Confidence 78999999999998777644 2 2489999999988653
No 100
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=98.73 E-value=8.4e-08 Score=72.11 Aligned_cols=121 Identities=19% Similarity=0.155 Sum_probs=86.0
Q ss_pred CCee--EEEEccCCCCCCeEEEEecCCCCCCcchHHHHHHHH-HhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcC
Q 030535 28 GGLN--TYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKV-AGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHN 103 (175)
Q Consensus 28 ~~~~--~~~~~p~~~~~~~~vv~lhg~~g~~~~~~~~~a~~l-a~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~ 103 (175)
+.+. .|+. ..+...|.++++|+--|+- ......++-+ ...+.+|+..+|+ +|.+.-.+.+.
T Consensus 63 D~vtL~a~~~--~~E~S~pTlLyfh~NAGNm-Ghr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~------------ 127 (300)
T KOG4391|consen 63 DKVTLDAYLM--LSESSRPTLLYFHANAGNM-GHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSEE------------ 127 (300)
T ss_pred cceeEeeeee--cccCCCceEEEEccCCCcc-cchhhHHHHHHHHcCceEEEEEeeccccCCCCcccc------------
Confidence 4444 4555 4556789999999766654 3444566655 4458999999999 88765222221
Q ss_pred CCcchhHHHHHHHHHHhc---CCCeEEEEEEeccHHHHHHhccC--CCccEEEEecCCCCCcccccc
Q 030535 104 TDKGYVDAKSVIAALKSK---GVSAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPGAITVDDING 165 (175)
Q Consensus 104 ~~~~~~d~~~~~~~l~~~---~~~~i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~~~~~~~~~~ 165 (175)
-+.-|.+++++++-.+ +..+|.++|.|.||..|+.+|.+ .++.++++=+.-+..+.....
T Consensus 128 --GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~ 192 (300)
T KOG4391|consen 128 --GLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIP 192 (300)
T ss_pred --ceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhh
Confidence 1227899999999887 34699999999999999998754 589999987776666544433
No 101
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.73 E-value=5.9e-08 Score=80.58 Aligned_cols=127 Identities=16% Similarity=0.160 Sum_probs=82.4
Q ss_pred eeCCeeEEEEccC-CCCCCeEEEEecCCC---CCCcchHHHHHHHHHhCC-CEEEeccCCCCC-CCCCCCCchhhHHHHH
Q 030535 26 QLGGLNTYVTGSG-PPDSKSAILLISDVF---GYEAPLFRKLADKVAGAG-FLVVAPDFFYGD-PIVDLNNPQFDREAWR 99 (175)
Q Consensus 26 ~~~~~~~~~~~p~-~~~~~~~vv~lhg~~---g~~~~~~~~~a~~la~~G-~~vi~~D~~~g~-~~~~~~~~~~~~~~~~ 99 (175)
..+.+...++.|+ +..+.|++|+||||. |...+. ..=...|+++| +.|+++|||-|. ..-...... ..+.
T Consensus 76 sEDCL~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~-~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~--~~~~- 151 (491)
T COG2272 76 SEDCLYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEP-LYDGSALAARGDVVVVSVNYRLGALGFLDLSSLD--TEDA- 151 (491)
T ss_pred cccceeEEeeccCCCCCCCcEEEEEeccccccCCCccc-ccChHHHHhcCCEEEEEeCcccccceeeehhhcc--cccc-
Confidence 3456777777667 555679999999875 332221 23356788888 999999998442 110000000 0000
Q ss_pred HhcCCCcchhHHHHHHHHHHhc------CCCeEEEEEEeccHHHHHHhccC----CCccEEEEecCCCC
Q 030535 100 KIHNTDKGYVDAKSVIAALKSK------GVSAIGAAGFCWGGVVAAKLASS----HDIQAAVVLHPGAI 158 (175)
Q Consensus 100 ~~~~~~~~~~d~~~~~~~l~~~------~~~~i~v~G~S~GG~ia~~~a~~----~~v~~~v~~~p~~~ 158 (175)
........|...+++|++++ |.++|.|+|.|.|++.++.+..- ..++.+|+.+|...
T Consensus 152 --~~~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 152 --FASNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred --ccccccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 00012348999999999987 46799999999999999985432 35677778887764
No 102
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=98.69 E-value=3.4e-08 Score=74.01 Aligned_cols=71 Identities=24% Similarity=0.420 Sum_probs=49.6
Q ss_pred CEEEeccCC-CCCCCCC---CCCchhhHHHHHHhcCCCcchhHHHHHHHHHHh-cCCCeEEEEEEeccHHHHHHhcc-C-
Q 030535 72 FLVVAPDFF-YGDPIVD---LNNPQFDREAWRKIHNTDKGYVDAKSVIAALKS-KGVSAIGAAGFCWGGVVAAKLAS-S- 144 (175)
Q Consensus 72 ~~vi~~D~~-~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~-~~~~~i~v~G~S~GG~ia~~~a~-~- 144 (175)
|.|+++|.+ .|.+. + ........ .|+...++.+.+ .+.+++.++||||||.+++.+|. .
T Consensus 1 f~vi~~d~rG~g~S~-~~~~~~~~~~~~-------------~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p 66 (230)
T PF00561_consen 1 FDVILFDLRGFGYSS-PHWDPDFPDYTT-------------DDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYP 66 (230)
T ss_dssp EEEEEEECTTSTTSS-SCCGSGSCTHCH-------------HHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSG
T ss_pred CEEEEEeCCCCCCCC-CCccCCcccccH-------------HHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCc
Confidence 689999998 66655 2 22222222 444444444443 36778999999999999999874 3
Q ss_pred CCccEEEEecCC
Q 030535 145 HDIQAAVVLHPG 156 (175)
Q Consensus 145 ~~v~~~v~~~p~ 156 (175)
++|+++|+..+.
T Consensus 67 ~~v~~lvl~~~~ 78 (230)
T PF00561_consen 67 ERVKKLVLISPP 78 (230)
T ss_dssp GGEEEEEEESES
T ss_pred hhhcCcEEEeee
Confidence 479999998885
No 103
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=98.68 E-value=9.6e-08 Score=72.38 Aligned_cols=112 Identities=23% Similarity=0.266 Sum_probs=58.2
Q ss_pred CCCCeEEEEecCCCCCCcchHHHHHH-HHHhCCCEEEeccCCC-------CCCCCCCCCchhhHHHHHHhcCCC------
Q 030535 40 PDSKSAILLISDVFGYEAPLFRKLAD-KVAGAGFLVVAPDFFY-------GDPIVDLNNPQFDREAWRKIHNTD------ 105 (175)
Q Consensus 40 ~~~~~~vv~lhg~~g~~~~~~~~~a~-~la~~G~~vi~~D~~~-------g~~~~~~~~~~~~~~~~~~~~~~~------ 105 (175)
....+.||++|| +|.+...+..+.+ .+......++.|+-+. |.. ...|+......
T Consensus 11 ~~~~~lvi~LHG-~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~----------~~~Wf~~~~~~~~~~~~ 79 (216)
T PF02230_consen 11 GKAKPLVILLHG-YGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYR----------MPAWFDIYDFDPEGPED 79 (216)
T ss_dssp ST-SEEEEEE---TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-E----------EE-SS-BSCSSSSSEB-
T ss_pred CCCceEEEEECC-CCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccC----------CCceeeccCCCcchhhh
Confidence 346789999995 4655444444444 1223467777776431 220 00121111100
Q ss_pred -----cchhHHHHHHHHHHhcC--CCeEEEEEEeccHHHHHHhccC--CCccEEEEecCCCCCccc
Q 030535 106 -----KGYVDAKSVIAALKSKG--VSAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPGAITVDD 162 (175)
Q Consensus 106 -----~~~~d~~~~~~~l~~~~--~~~i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~~~~~~~ 162 (175)
+..+.+..+++...+.+ .++|+++|||+||.+++.++.. ..+.++|++++.+.....
T Consensus 80 ~~~i~~s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~ 145 (216)
T PF02230_consen 80 EAGIEESAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESE 145 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccccc
Confidence 11133444444443333 4689999999999999998843 589999999998876543
No 104
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.68 E-value=4.6e-07 Score=69.35 Aligned_cols=107 Identities=19% Similarity=0.181 Sum_probs=61.1
Q ss_pred CCeEEEEecCCCCCCcchHHHHHHHHHh--------CCCEEEeccCCCCCCCCCCCCch-hhHHHHHHhcCCCcchhHHH
Q 030535 42 SKSAILLISDVFGYEAPLFRKLADKVAG--------AGFLVVAPDFFYGDPIVDLNNPQ-FDREAWRKIHNTDKGYVDAK 112 (175)
Q Consensus 42 ~~~~vv~lhg~~g~~~~~~~~~a~~la~--------~G~~vi~~D~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~ 112 (175)
.+.+|||+||..|.. ..++.++..+.. ..+.+++.|+....+. ..... ....++. .+.+.
T Consensus 3 ~g~pVlFIhG~~Gs~-~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~--~~g~~l~~q~~~~--------~~~i~ 71 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSY-KQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSA--FHGRTLQRQAEFL--------AEAIK 71 (225)
T ss_pred CCCEEEEECcCCCCH-hHHHHHHHHHhhhhhhccCccceeEEEeccCccccc--cccccHHHHHHHH--------HHHHH
Confidence 356799999866654 566677766622 1478888886421111 11000 0111111 02233
Q ss_pred HHHHHHHhc--CCCeEEEEEEeccHHHHHHhccC-----CCccEEEEecCCCCC
Q 030535 113 SVIAALKSK--GVSAIGAAGFCWGGVVAAKLASS-----HDIQAAVVLHPGAIT 159 (175)
Q Consensus 113 ~~~~~l~~~--~~~~i~v~G~S~GG~ia~~~a~~-----~~v~~~v~~~p~~~~ 159 (175)
.+++..+.. +..+|.++||||||.++..+... ..|+.+|.+......
T Consensus 72 ~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g 125 (225)
T PF07819_consen 72 YILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRG 125 (225)
T ss_pred HHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCC
Confidence 333333221 35799999999999998886532 368999977755543
No 105
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=98.67 E-value=2.2e-07 Score=69.79 Aligned_cols=107 Identities=20% Similarity=0.148 Sum_probs=75.6
Q ss_pred CCeEEEEecCCCCCCc-chHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHH
Q 030535 42 SKSAILLISDVFGYEA-PLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALK 119 (175)
Q Consensus 42 ~~~~vv~lhg~~g~~~-~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 119 (175)
....||++||...... ..+..+|..|++.||.++++|+. .|.+. ... + ........+|+..+++++.
T Consensus 32 s~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~--gsf-~--------~Gn~~~eadDL~sV~q~~s 100 (269)
T KOG4667|consen 32 STEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESE--GSF-Y--------YGNYNTEADDLHSVIQYFS 100 (269)
T ss_pred CceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcC--Ccc-c--------cCcccchHHHHHHHHHHhc
Confidence 4568999997665432 45677999999999999999986 45443 111 0 0111122399999999998
Q ss_pred hcCCCeEEEEEEeccHHHHHHhccC-CCccEEEEecCCCCC
Q 030535 120 SKGVSAIGAAGFCWGGVVAAKLASS-HDIQAAVVLHPGAIT 159 (175)
Q Consensus 120 ~~~~~~i~v~G~S~GG~ia~~~a~~-~~v~~~v~~~p~~~~ 159 (175)
.....=-.++|||-||.+++.+|.. ..++-+|-+++....
T Consensus 101 ~~nr~v~vi~gHSkGg~Vvl~ya~K~~d~~~viNcsGRydl 141 (269)
T KOG4667|consen 101 NSNRVVPVILGHSKGGDVVLLYASKYHDIRNVINCSGRYDL 141 (269)
T ss_pred cCceEEEEEEeecCccHHHHHHHHhhcCchheEEcccccch
Confidence 6432234789999999999998854 668888877776653
No 106
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.65 E-value=9e-08 Score=80.91 Aligned_cols=122 Identities=17% Similarity=0.174 Sum_probs=78.1
Q ss_pred eeCCeeEEEEccCC---CCCCeEEEEecCCC---CCCcchHHHHHHHHHhC-C-CEEEeccCCCCC-CCCCCCCchhhHH
Q 030535 26 QLGGLNTYVTGSGP---PDSKSAILLISDVF---GYEAPLFRKLADKVAGA-G-FLVVAPDFFYGD-PIVDLNNPQFDRE 96 (175)
Q Consensus 26 ~~~~~~~~~~~p~~---~~~~~~vv~lhg~~---g~~~~~~~~~a~~la~~-G-~~vi~~D~~~g~-~~~~~~~~~~~~~ 96 (175)
..+.+...++.|.. ..+.|++|++|||. |.. ... ....|+.+ + +.|++++||-|. .. ........
T Consensus 75 sEdcl~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~-~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~--~~~~~~~~- 148 (493)
T cd00312 75 SEDCLYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSG-SLY--PGDGLAREGDNVIVVSINYRLGVLGF--LSTGDIEL- 148 (493)
T ss_pred CCcCCeEEEEeCCCCCCCCCCCEEEEEcCCccccCCC-CCC--ChHHHHhcCCCEEEEEeccccccccc--ccCCCCCC-
Confidence 34667777776653 24569999999874 322 111 23455554 3 999999998442 11 10000000
Q ss_pred HHHHhcCCCcchhHHHHHHHHHHhc------CCCeEEEEEEeccHHHHHHhccC----CCccEEEEecCCCCC
Q 030535 97 AWRKIHNTDKGYVDAKSVIAALKSK------GVSAIGAAGFCWGGVVAAKLASS----HDIQAAVVLHPGAIT 159 (175)
Q Consensus 97 ~~~~~~~~~~~~~d~~~~~~~l~~~------~~~~i~v~G~S~GG~ia~~~a~~----~~v~~~v~~~p~~~~ 159 (175)
.-.....|...+++|++++ +.++|.|+|+|.||..+..++.. ..++++|+.++....
T Consensus 149 ------~~n~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~~ 215 (493)
T cd00312 149 ------PGNYGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSALS 215 (493)
T ss_pred ------CcchhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCccC
Confidence 0011237899999999886 46799999999999999986643 357888888876653
No 107
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.61 E-value=1.7e-07 Score=71.09 Aligned_cols=97 Identities=15% Similarity=0.218 Sum_probs=66.2
Q ss_pred eEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcCC
Q 030535 44 SAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGV 123 (175)
Q Consensus 44 ~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~ 123 (175)
+.|+++|++.|.. ..|..+++.|....+.|+.++++..... .....++. +-+...++.+++...
T Consensus 1 ~~lf~~p~~gG~~-~~y~~la~~l~~~~~~v~~i~~~~~~~~---~~~~~si~------------~la~~y~~~I~~~~~ 64 (229)
T PF00975_consen 1 RPLFCFPPAGGSA-SSYRPLARALPDDVIGVYGIEYPGRGDD---EPPPDSIE------------ELASRYAEAIRARQP 64 (229)
T ss_dssp -EEEEESSTTCSG-GGGHHHHHHHTTTEEEEEEECSTTSCTT---SHEESSHH------------HHHHHHHHHHHHHTS
T ss_pred CeEEEEcCCccCH-HHHHHHHHhCCCCeEEEEEEecCCCCCC---CCCCCCHH------------HHHHHHHHHhhhhCC
Confidence 3689999888854 6889999999765688999887632111 10112222 224455555555433
Q ss_pred -CeEEEEEEeccHHHHHHhccC-----CCccEEEEecCC
Q 030535 124 -SAIGAAGFCWGGVVAAKLASS-----HDIQAAVVLHPG 156 (175)
Q Consensus 124 -~~i~v~G~S~GG~ia~~~a~~-----~~v~~~v~~~p~ 156 (175)
.++.++|||+||.+|..+|+. ..+..++++.+.
T Consensus 65 ~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~ 103 (229)
T PF00975_consen 65 EGPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDSP 103 (229)
T ss_dssp SSSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESCS
T ss_pred CCCeeehccCccHHHHHHHHHHHHHhhhccCceEEecCC
Confidence 499999999999999999842 368889888844
No 108
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=98.60 E-value=1.2e-07 Score=70.67 Aligned_cols=120 Identities=18% Similarity=0.211 Sum_probs=85.0
Q ss_pred EeeCCeeEEEEccCCCCCCeEEEEecCCCCCCcchHHHHHHHHHhC-CCEEEeccCC-CCCCCCCCCCchhhHHHHHHhc
Q 030535 25 QQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGA-GFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIH 102 (175)
Q Consensus 25 ~~~~~~~~~~~~p~~~~~~~~vv~lhg~~g~~~~~~~~~a~~la~~-G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~ 102 (175)
+.+++....+. +.......|+++.|..|+....+......|... -+.+++.|-+ +|.+. |++.+...+-.
T Consensus 26 v~vng~ql~y~--~~G~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~Sr--PP~Rkf~~~ff---- 97 (277)
T KOG2984|consen 26 VHVNGTQLGYC--KYGHGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSR--PPERKFEVQFF---- 97 (277)
T ss_pred eeecCceeeee--ecCCCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCC--CCcccchHHHH----
Confidence 46677665555 233333568899988886655555555555443 3999999988 78776 44444333222
Q ss_pred CCCcchhHHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhccC--CCccEEEEecCCC
Q 030535 103 NTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPGA 157 (175)
Q Consensus 103 ~~~~~~~d~~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~~ 157 (175)
..|.+.+++.++..+..++.++|+|-||.+++..|.. +.|..+|++....
T Consensus 98 -----~~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~a 149 (277)
T KOG2984|consen 98 -----MKDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAA 149 (277)
T ss_pred -----HHhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccc
Confidence 3899999999999988999999999999999997754 4677777666543
No 109
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=98.59 E-value=3.2e-07 Score=78.16 Aligned_cols=120 Identities=18% Similarity=0.165 Sum_probs=79.4
Q ss_pred EEEEccCC---CCCCeEEEEecCCCCCCc--chH----HHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhc
Q 030535 32 TYVTGSGP---PDSKSAILLISDVFGYEA--PLF----RKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIH 102 (175)
Q Consensus 32 ~~~~~p~~---~~~~~~vv~lhg~~g~~~--~~~----~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~ 102 (175)
+.+++|.. ..+.|.|+++-||.+... +.+ .....+|+++||.|+.+|.++..-. -..++.++...
T Consensus 628 gmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hR------GlkFE~~ik~k 701 (867)
T KOG2281|consen 628 GMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHR------GLKFESHIKKK 701 (867)
T ss_pred EEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCcccc------chhhHHHHhhc
Confidence 44565543 346799999999886321 112 2245689999999999997632111 11244555544
Q ss_pred CCCcchhHHHHHHHHHHhc----CCCeEEEEEEeccHHHHHH-hccCCCc-cEEEEecCCC
Q 030535 103 NTDKGYVDAKSVIAALKSK----GVSAIGAAGFCWGGVVAAK-LASSHDI-QAAVVLHPGA 157 (175)
Q Consensus 103 ~~~~~~~d~~~~~~~l~~~----~~~~i~v~G~S~GG~ia~~-~a~~~~v-~~~v~~~p~~ 157 (175)
--...++|=...+++|.++ +.++|+|-|||+||.++++ +++.+.| +++|+-+|..
T Consensus 702 mGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT 762 (867)
T KOG2281|consen 702 MGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVT 762 (867)
T ss_pred cCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcce
Confidence 3344446667778888777 3579999999999999998 5677765 6666655553
No 110
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.58 E-value=1.4e-06 Score=62.75 Aligned_cols=115 Identities=21% Similarity=0.177 Sum_probs=69.3
Q ss_pred eEEEEecCCCC-CCcchHHHHHHHHHhCCCEEEeccCCCCC--CCC--CCCCchhhHHHHHHhcCCCcchhHHHHHHHHH
Q 030535 44 SAILLISDVFG-YEAPLFRKLADKVAGAGFLVVAPDFFYGD--PIV--DLNNPQFDREAWRKIHNTDKGYVDAKSVIAAL 118 (175)
Q Consensus 44 ~~vv~lhg~~g-~~~~~~~~~a~~la~~G~~vi~~D~~~g~--~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l 118 (175)
-.||+-||..+ .+...+..++..|+.+|+.|.++++++.. ... .|....... .......+..+
T Consensus 15 ~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~------------~~~~~~~~aql 82 (213)
T COG3571 15 VTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTL------------NPEYIVAIAQL 82 (213)
T ss_pred EEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccC------------CHHHHHHHHHH
Confidence 34556665443 44567899999999999999999987532 110 111111111 12223333344
Q ss_pred HhcC-CCeEEEEEEeccHHHHHHhccC--CCccEEEEe-cCCCC---C----cccccccCccc
Q 030535 119 KSKG-VSAIGAAGFCWGGVVAAKLASS--HDIQAAVVL-HPGAI---T----VDDINGKFETS 170 (175)
Q Consensus 119 ~~~~-~~~i~v~G~S~GG~ia~~~a~~--~~v~~~v~~-~p~~~---~----~~~~~~~~~p~ 170 (175)
.+.. ..++++-|+||||..+-+++.+ ..|++++.+ ||... . .+++..+..|+
T Consensus 83 ~~~l~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGKPe~~Rt~HL~gl~tPt 145 (213)
T COG3571 83 RAGLAEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKPEQLRTEHLTGLKTPT 145 (213)
T ss_pred HhcccCCceeeccccccchHHHHHHHhhcCCcceEEEecCccCCCCCcccchhhhccCCCCCe
Confidence 4443 3489999999999999998854 358888843 33332 1 24555555554
No 111
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.55 E-value=1.6e-07 Score=79.65 Aligned_cols=123 Identities=12% Similarity=0.047 Sum_probs=73.1
Q ss_pred eeCCeeEEEEccCCCC---CCeEEEEecCCC---CCCcchHHHHHHHHHhCCCEEEeccCCCC---CCCCCCCCch-hhH
Q 030535 26 QLGGLNTYVTGSGPPD---SKSAILLISDVF---GYEAPLFRKLADKVAGAGFLVVAPDFFYG---DPIVDLNNPQ-FDR 95 (175)
Q Consensus 26 ~~~~~~~~~~~p~~~~---~~~~vv~lhg~~---g~~~~~~~~~a~~la~~G~~vi~~D~~~g---~~~~~~~~~~-~~~ 95 (175)
..+.+..-++.|.... +.|++|++|||. |........-...++++++.|++++||-| --........ .+.
T Consensus 105 sEDCL~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~ 184 (535)
T PF00135_consen 105 SEDCLYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNY 184 (535)
T ss_dssp ES---EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTH
T ss_pred CchHHHHhhhhccccccccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhh
Confidence 4466776666656543 359999999875 32211233445566788999999999843 1110011111 111
Q ss_pred HHHHHhcCCCcchhHHHHHHHHHHhc------CCCeEEEEEEeccHHHHHHhcc----CCCccEEEEecCCCCC
Q 030535 96 EAWRKIHNTDKGYVDAKSVIAALKSK------GVSAIGAAGFCWGGVVAAKLAS----SHDIQAAVVLHPGAIT 159 (175)
Q Consensus 96 ~~~~~~~~~~~~~~d~~~~~~~l~~~------~~~~i~v~G~S~GG~ia~~~a~----~~~v~~~v~~~p~~~~ 159 (175)
...|...+++|++++ |.++|.|+|+|.||..+..... +..++++|+.+++...
T Consensus 185 -----------Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~~ 247 (535)
T PF00135_consen 185 -----------GLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSALS 247 (535)
T ss_dssp -----------HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TTS
T ss_pred -----------hhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeecccccccccccccccccccc
Confidence 127899999999987 3679999999999999887442 2479999999996553
No 112
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.54 E-value=8.6e-07 Score=67.56 Aligned_cols=108 Identities=17% Similarity=0.175 Sum_probs=63.9
Q ss_pred CCeEEEEecCCCCCCcchHHH--HHHHHHh-CCCEEEeccCCC-CCCCCCCCCchhhHHHHHHhc--CCCcchhHHHHHH
Q 030535 42 SKSAILLISDVFGYEAPLFRK--LADKVAG-AGFLVVAPDFFY-GDPIVDLNNPQFDREAWRKIH--NTDKGYVDAKSVI 115 (175)
Q Consensus 42 ~~~~vv~lhg~~g~~~~~~~~--~a~~la~-~G~~vi~~D~~~-g~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~ 115 (175)
+.|.||+|||..+.- +.+.. -...|++ +||.|+-|+-.. .... .. ..|+... .-......+..++
T Consensus 15 ~~PLVv~LHG~~~~a-~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~----~c----w~w~~~~~~~g~~d~~~i~~lv 85 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSA-EDFAAGSGWNALADREGFIVVYPEQSRRANPQ----GC----WNWFSDDQQRGGGDVAFIAALV 85 (220)
T ss_pred CCCEEEEeCCCCCCH-HHHHhhcCHHHHhhcCCeEEEcccccccCCCC----Cc----ccccccccccCccchhhHHHHH
Confidence 568999999776543 33222 1124655 499999998431 1111 00 0121100 0011124466777
Q ss_pred HHHHhc---CCCeEEEEEEeccHHHHHHhcc-CC-CccEEEEecCCCC
Q 030535 116 AALKSK---GVSAIGAAGFCWGGVVAAKLAS-SH-DIQAAVVLHPGAI 158 (175)
Q Consensus 116 ~~l~~~---~~~~i~v~G~S~GG~ia~~~a~-~~-~v~~~v~~~p~~~ 158 (175)
+++.++ |.+||.+.|+|.||..+..++. .+ .+.++.++++...
T Consensus 86 ~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~ 133 (220)
T PF10503_consen 86 DYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPY 133 (220)
T ss_pred HhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeeccccc
Confidence 777665 5679999999999999999885 34 5666666666544
No 113
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.54 E-value=1.3e-06 Score=65.14 Aligned_cols=99 Identities=20% Similarity=0.353 Sum_probs=63.1
Q ss_pred CeEEEEecCCCCCCcchHHHHHHHHHhCC--CEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHH
Q 030535 43 KSAILLISDVFGYEAPLFRKLADKVAGAG--FLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALK 119 (175)
Q Consensus 43 ~~~vv~lhg~~g~~~~~~~~~a~~la~~G--~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 119 (175)
.|.++++||+.+.. ..+......+.... |.++.+|++ +|.+. .. ......+ ..++..+++
T Consensus 21 ~~~i~~~hg~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~---~~~~~~~---------~~~~~~~~~--- 83 (282)
T COG0596 21 GPPLVLLHGFPGSS-SVWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA---GYSLSAY---------ADDLAALLD--- 83 (282)
T ss_pred CCeEEEeCCCCCch-hhhHHHHHHhhccccceEEEEecccCCCCCC-cc---cccHHHH---------HHHHHHHHH---
Confidence 45899999877655 44444323333321 999999998 45432 00 0011111 244444444
Q ss_pred hcCCCeEEEEEEeccHHHHHHhccC-C-CccEEEEecCCCC
Q 030535 120 SKGVSAIGAAGFCWGGVVAAKLASS-H-DIQAAVVLHPGAI 158 (175)
Q Consensus 120 ~~~~~~i~v~G~S~GG~ia~~~a~~-~-~v~~~v~~~p~~~ 158 (175)
..+..++.++||||||.+++.++.. + +++++++..+...
T Consensus 84 ~~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~ 124 (282)
T COG0596 84 ALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPP 124 (282)
T ss_pred HhCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCC
Confidence 4455679999999999999998853 4 6999999887654
No 114
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.53 E-value=1.4e-07 Score=76.04 Aligned_cols=110 Identities=17% Similarity=0.162 Sum_probs=66.3
Q ss_pred CCCeEEEEecCCCCCC--cchHHHHHHHHHhC---CCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHH
Q 030535 41 DSKSAILLISDVFGYE--APLFRKLADKVAGA---GFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVI 115 (175)
Q Consensus 41 ~~~~~vv~lhg~~g~~--~~~~~~~a~~la~~---G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 115 (175)
..+|.+|++|||.+.. ......+.+.|.++ ++.|++.|+..+... . +... . ......-..+...+
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~---~---Y~~a-~---~n~~~vg~~la~~l 138 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASN---N---YPQA-V---ANTRLVGRQLAKFL 138 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-------HHHH-H---HHHHHHHHHHHHHH
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccc---c---ccch-h---hhHHHHHHHHHHHH
Confidence 3679999999887644 34566777766554 899999997533211 1 1110 0 01112224566667
Q ss_pred HHHHh-c--CCCeEEEEEEeccHHHHHHhccC--C--CccEEEEecCCCCCc
Q 030535 116 AALKS-K--GVSAIGAAGFCWGGVVAAKLASS--H--DIQAAVVLHPGAITV 160 (175)
Q Consensus 116 ~~l~~-~--~~~~i~v~G~S~GG~ia~~~a~~--~--~v~~~v~~~p~~~~~ 160 (175)
+.|.+ . ..++|.++|||+||.++-.+++. . +|..+..+.|+....
T Consensus 139 ~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~F 190 (331)
T PF00151_consen 139 SFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPLF 190 (331)
T ss_dssp HHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TTT
T ss_pred HHHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccccc
Confidence 77763 2 45799999999999999998843 3 799999999887643
No 115
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=98.52 E-value=4e-07 Score=67.92 Aligned_cols=105 Identities=12% Similarity=0.109 Sum_probs=70.3
Q ss_pred CCCCCCeEEEEecCCCC--CCcchHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHH
Q 030535 38 GPPDSKSAILLISDVFG--YEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVI 115 (175)
Q Consensus 38 ~~~~~~~~vv~lhg~~g--~~~~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 115 (175)
.+....|..||+|||+= .+...--..+.-+..+||+|...+|-.. +. ...+.+.+ .++...+
T Consensus 62 g~~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~l~-~q------~htL~qt~---------~~~~~gv 125 (270)
T KOG4627|consen 62 GSTNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYNLC-PQ------VHTLEQTM---------TQFTHGV 125 (270)
T ss_pred cCCCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccCcC-cc------cccHHHHH---------HHHHHHH
Confidence 34556789999999862 2222223455666778999999996321 11 11122222 5666666
Q ss_pred HHHHhc--CCCeEEEEEEeccHHHHHHh-c--cCCCccEEEEecCCCC
Q 030535 116 AALKSK--GVSAIGAAGFCWGGVVAAKL-A--SSHDIQAAVVLHPGAI 158 (175)
Q Consensus 116 ~~l~~~--~~~~i~v~G~S~GG~ia~~~-a--~~~~v~~~v~~~p~~~ 158 (175)
+|+.+. ..+++.+-|||.|+.++..+ + ++|+|.+++++++...
T Consensus 126 ~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~ 173 (270)
T KOG4627|consen 126 NFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYD 173 (270)
T ss_pred HHHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhh
Confidence 776654 35679999999999999984 4 4589999999988765
No 116
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.48 E-value=1.7e-06 Score=68.44 Aligned_cols=115 Identities=17% Similarity=0.205 Sum_probs=70.6
Q ss_pred eeEEEEccCCCCCCeEEEEecCCCC--CCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCc
Q 030535 30 LNTYVTGSGPPDSKSAILLISDVFG--YEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDK 106 (175)
Q Consensus 30 ~~~~~~~p~~~~~~~~vv~lhg~~g--~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~ 106 (175)
...+.+.+........|||+.|... .+..+...+++.|...||.++-+-+. .-..+ ...+.+.+
T Consensus 20 ~~afe~~~~~~~~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~-G~~SL~~D------------ 86 (303)
T PF08538_consen 20 LVAFEFTSSSSSAPNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGW-GTSSLDRD------------ 86 (303)
T ss_dssp TEEEEEEEE-TTSSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS--S--HHHH------------
T ss_pred CeEEEecCCCCCCCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCc-CcchhhhH------------
Confidence 3344443233334456777765443 33467899999998789999999986 22333 22222222
Q ss_pred chhHHHHHHHHHHhc-----CCCeEEEEEEeccHHHHHHhcc-------CCCccEEEEecCCCC
Q 030535 107 GYVDAKSVIAALKSK-----GVSAIGAAGFCWGGVVAAKLAS-------SHDIQAAVVLHPGAI 158 (175)
Q Consensus 107 ~~~d~~~~~~~l~~~-----~~~~i~v~G~S~GG~ia~~~a~-------~~~v~~~v~~~p~~~ 158 (175)
++|+..+++|++.. +.++|++||||-|-.-+++|.. .++|+++|+-+|.-.
T Consensus 87 -~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSD 149 (303)
T PF08538_consen 87 -VEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSD 149 (303)
T ss_dssp -HHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---
T ss_pred -HHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCC
Confidence 28999999999987 3579999999999999999762 257999999999754
No 117
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.47 E-value=1e-06 Score=65.57 Aligned_cols=93 Identities=18% Similarity=0.183 Sum_probs=60.6
Q ss_pred EEEecCCCCCC-cchHHHHHHHHHhCC--CEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcC
Q 030535 46 ILLISDVFGYE-APLFRKLADKVAGAG--FLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKG 122 (175)
Q Consensus 46 vv~lhg~~g~~-~~~~~~~a~~la~~G--~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~ 122 (175)
+|.+||.-+.. ......+.+++++++ ..+..||++.. + . .-+..+.+.+.+..
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~~-p-------~----------------~a~~~l~~~i~~~~ 57 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPPF-P-------E----------------EAIAQLEQLIEELK 57 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCcC-H-------H----------------HHHHHHHHHHHhCC
Confidence 78999654432 233556777888875 45667765311 0 0 11333444444444
Q ss_pred CCeEEEEEEeccHHHHHHhccCCCccEEEEecCCCCCcccc
Q 030535 123 VSAIGAAGFCWGGVVAAKLASSHDIQAAVVLHPGAITVDDI 163 (175)
Q Consensus 123 ~~~i~v~G~S~GG~ia~~~a~~~~v~~~v~~~p~~~~~~~~ 163 (175)
.+.+.++|.||||..|..+|..-.+++ |+++|+......+
T Consensus 58 ~~~~~liGSSlGG~~A~~La~~~~~~a-vLiNPav~p~~~l 97 (187)
T PF05728_consen 58 PENVVLIGSSLGGFYATYLAERYGLPA-VLINPAVRPYELL 97 (187)
T ss_pred CCCeEEEEEChHHHHHHHHHHHhCCCE-EEEcCCCCHHHHH
Confidence 456999999999999999987656666 8899998765433
No 118
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.46 E-value=1.1e-06 Score=70.62 Aligned_cols=117 Identities=15% Similarity=0.137 Sum_probs=74.7
Q ss_pred eeEEEEccCCC--CCCeEEEEecCCCCCCc-c-hHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCch----hhHHHHHH
Q 030535 30 LNTYVTGSGPP--DSKSAILLISDVFGYEA-P-LFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQ----FDREAWRK 100 (175)
Q Consensus 30 ~~~~~~~p~~~--~~~~~vv~lhg~~g~~~-~-~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~----~~~~~~~~ 100 (175)
.+..+..|... ..+|.+|.+. |+|.+. . ...-+|..|.++|+..+.+-.+ +|.-. |.... ....+.+
T Consensus 77 a~~~~~~P~~~~~~~rp~~IhLa-gTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~Rk--P~~Q~~s~l~~VsDl~- 152 (348)
T PF09752_consen 77 ARFQLLLPKRWDSPYRPVCIHLA-GTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRK--PKDQRRSSLRNVSDLF- 152 (348)
T ss_pred eEEEEEECCccccCCCceEEEec-CCCccchhhhhhhhhhHHHHcCcceEEEecccccccC--hhHhhcccccchhHHH-
Confidence 33334444442 3568888887 555442 1 1233589999999999999988 66433 22111 1112221
Q ss_pred hcCCCcchhHHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhccC-CCccEEE
Q 030535 101 IHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASS-HDIQAAV 151 (175)
Q Consensus 101 ~~~~~~~~~d~~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a~~-~~v~~~v 151 (175)
.+. ...+.++..+++|++++|..++++.|.||||..|...|.. ++.-+++
T Consensus 153 ~~g-~~~i~E~~~Ll~Wl~~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~v 203 (348)
T PF09752_consen 153 VMG-RATILESRALLHWLEREGYGPLGLTGISMGGHMAALAASNWPRPVALV 203 (348)
T ss_pred HHH-hHHHHHHHHHHHHHHhcCCCceEEEEechhHhhHHhhhhcCCCceeEE
Confidence 111 3455888999999999999999999999999999987743 5433333
No 119
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.40 E-value=8.6e-06 Score=67.66 Aligned_cols=117 Identities=13% Similarity=0.124 Sum_probs=70.3
Q ss_pred eeEEEEccCC--CCCCeEEEEecCCCCCCcchHHHHHHHHHhCC----CEEEeccCCCCCCCC-CCCCchhhHHHHHHhc
Q 030535 30 LNTYVTGSGP--PDSKSAILLISDVFGYEAPLFRKLADKVAGAG----FLVVAPDFFYGDPIV-DLNNPQFDREAWRKIH 102 (175)
Q Consensus 30 ~~~~~~~p~~--~~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G----~~vi~~D~~~g~~~~-~~~~~~~~~~~~~~~~ 102 (175)
.+++++.|.. ..+.|.|+++||..-........+.+.|.++| ..++.+|...+.... ... ....+.+++
T Consensus 194 r~v~VY~P~~y~~~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~-~~~~f~~~l--- 269 (411)
T PRK10439 194 RRVWIYTTGDAAPEERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELP-CNADFWLAV--- 269 (411)
T ss_pred eEEEEEECCCCCCCCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCC-chHHHHHHH---
Confidence 4567776543 23568888888643222223455667777777 356778753211110 011 011111121
Q ss_pred CCCcchhHHHHHHHHHHhc-----CCCeEEEEEEeccHHHHHHhccC--CCccEEEEecCCCC
Q 030535 103 NTDKGYVDAKSVIAALKSK-----GVSAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPGAI 158 (175)
Q Consensus 103 ~~~~~~~d~~~~~~~l~~~-----~~~~i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~~~ 158 (175)
.++++-+++++ +.++.+|+|+||||..++.++.+ +.+.++++++|++.
T Consensus 270 --------~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~w 324 (411)
T PRK10439 270 --------QQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSFW 324 (411)
T ss_pred --------HHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEecccee
Confidence 35555666554 34679999999999999998843 47899999999863
No 120
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.39 E-value=6.7e-06 Score=64.48 Aligned_cols=109 Identities=12% Similarity=0.137 Sum_probs=72.6
Q ss_pred CeEEEEecCCCCCCcchHHHHHHHHHhC---CCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHH
Q 030535 43 KSAILLISDVFGYEAPLFRKLADKVAGA---GFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAAL 118 (175)
Q Consensus 43 ~~~vv~lhg~~g~~~~~~~~~a~~la~~---G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l 118 (175)
+..++|++|-.|.- +.|..+.+.|.++ .|.|++..+. +.... .. .... .....-.+.+.++..++++
T Consensus 2 ~~li~~IPGNPGlv-~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~--~~-~~~~-----~~~~~~sL~~QI~hk~~~i 72 (266)
T PF10230_consen 2 RPLIVFIPGNPGLV-EFYEEFLSALYEKLNPQFEILGISHAGHSTSP--SN-SKFS-----PNGRLFSLQDQIEHKIDFI 72 (266)
T ss_pred cEEEEEECCCCChH-HHHHHHHHHHHHhCCCCCeeEEecCCCCcCCc--cc-cccc-----CCCCccCHHHHHHHHHHHH
Confidence 46789999888875 7899999999866 6999999985 22211 11 0000 0011112224444444444
Q ss_pred Hhc------CCCeEEEEEEeccHHHHHHhccC-----CCccEEEEecCCCCCc
Q 030535 119 KSK------GVSAIGAAGFCWGGVVAAKLASS-----HDIQAAVVLHPGAITV 160 (175)
Q Consensus 119 ~~~------~~~~i~v~G~S~GG~ia~~~a~~-----~~v~~~v~~~p~~~~~ 160 (175)
++. ...++.++|||.|+.+++++..+ .+|++++++.|.....
T Consensus 73 ~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~i 125 (266)
T PF10230_consen 73 KELIPQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDI 125 (266)
T ss_pred HHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccccc
Confidence 432 34589999999999999997732 3899999999998754
No 121
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.38 E-value=4.8e-06 Score=64.06 Aligned_cols=108 Identities=12% Similarity=0.143 Sum_probs=68.9
Q ss_pred CCCeEEEEecCCCCCCcc-hHHHHHHHHHhCCC--EEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHH
Q 030535 41 DSKSAILLISDVFGYEAP-LFRKLADKVAGAGF--LVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIA 116 (175)
Q Consensus 41 ~~~~~vv~lhg~~g~~~~-~~~~~a~~la~~G~--~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 116 (175)
..+..+||+| |+..+.+ .....++....-++ .++.+.++ .|... .......+. . ....++..+++
T Consensus 16 ~~~~vlvfVH-Gyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~-~Y~~d~~~a--~-------~s~~~l~~~L~ 84 (233)
T PF05990_consen 16 PDKEVLVFVH-GYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLL-GYFYDRESA--R-------FSGPALARFLR 84 (233)
T ss_pred CCCeEEEEEe-CCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChh-hhhhhhhhH--H-------HHHHHHHHHHH
Confidence 3567899999 5554433 34555554444455 79999998 44422 111111111 1 11266777777
Q ss_pred HHHhc-CCCeEEEEEEeccHHHHHHhcc----C-------CCccEEEEecCCCCC
Q 030535 117 ALKSK-GVSAIGAAGFCWGGVVAAKLAS----S-------HDIQAAVVLHPGAIT 159 (175)
Q Consensus 117 ~l~~~-~~~~i~v~G~S~GG~ia~~~a~----~-------~~v~~~v~~~p~~~~ 159 (175)
.|.+. +..+|.+++||||+.+.+.+-. . .++..+++.+|....
T Consensus 85 ~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 85 DLARAPGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred HHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 77776 6789999999999999997431 1 157889999988764
No 122
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.36 E-value=6.7e-06 Score=68.74 Aligned_cols=89 Identities=11% Similarity=0.185 Sum_probs=63.4
Q ss_pred chHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhc-CCCeEEEEEEeccH
Q 030535 58 PLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK-GVSAIGAAGFCWGG 135 (175)
Q Consensus 58 ~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~-~~~~i~v~G~S~GG 135 (175)
..|..+.+.|.+.||.+ ..|++ ++-.+ .... ....+ .+++...++.+.+. +..++.++||||||
T Consensus 108 ~~~~~li~~L~~~GY~~-~~dL~g~gYDw-R~~~---~~~~~---------~~~Lk~lIe~~~~~~g~~kV~LVGHSMGG 173 (440)
T PLN02733 108 YYFHDMIEQLIKWGYKE-GKTLFGFGYDF-RQSN---RLPET---------MDGLKKKLETVYKASGGKKVNIISHSMGG 173 (440)
T ss_pred HHHHHHHHHHHHcCCcc-CCCcccCCCCc-cccc---cHHHH---------HHHHHHHHHHHHHHcCCCCEEEEEECHhH
Confidence 67889999999999866 78887 56555 1111 11122 26677777766554 56799999999999
Q ss_pred HHHHHhcc-C-----CCccEEEEecCCCCCc
Q 030535 136 VVAAKLAS-S-----HDIQAAVVLHPGAITV 160 (175)
Q Consensus 136 ~ia~~~a~-~-----~~v~~~v~~~p~~~~~ 160 (175)
.+++.++. . ..|+.+|++++.....
T Consensus 174 lva~~fl~~~p~~~~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 174 LLVKCFMSLHSDVFEKYVNSWIAIAAPFQGA 204 (440)
T ss_pred HHHHHHHHHCCHhHHhHhccEEEECCCCCCC
Confidence 99998663 2 2489999888776644
No 123
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.34 E-value=6.2e-06 Score=73.28 Aligned_cols=134 Identities=14% Similarity=0.129 Sum_probs=79.6
Q ss_pred ccceEEEe--eCCeeE--EEEccCC---CCCCeEEEEecCCCCC---CcchHHHHHHH-HHhCCCEEEeccCCCCCCCCC
Q 030535 19 CGAGTVQQ--LGGLNT--YVTGSGP---PDSKSAILLISDVFGY---EAPLFRKLADK-VAGAGFLVVAPDFFYGDPIVD 87 (175)
Q Consensus 19 ~~~~~~~~--~~~~~~--~~~~p~~---~~~~~~vv~lhg~~g~---~~~~~~~~a~~-la~~G~~vi~~D~~~g~~~~~ 87 (175)
.|...+.+ .+++.. .+..|.. .++.|.++.+|||.+. .......+... +...|+.|+..|.++-... .
T Consensus 495 ~p~~~~~~i~~~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~-G 573 (755)
T KOG2100|consen 495 LPIVEFGKIEIDGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGY-G 573 (755)
T ss_pred CCcceeEEEEeccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCc-c
Confidence 44455443 355554 3344432 2356888889988751 11122344444 5567999999998621111 1
Q ss_pred CCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhc---CCCeEEEEEEeccHHHHHHhc-cCC-C-ccEEEEecCCCC
Q 030535 88 LNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK---GVSAIGAAGFCWGGVVAAKLA-SSH-D-IQAAVVLHPGAI 158 (175)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~---~~~~i~v~G~S~GG~ia~~~a-~~~-~-v~~~v~~~p~~~ 158 (175)
.. +.....+.-=...++|...+++++.++ |.++|+++|+|+||.+++.+. ..+ + ++|+++.+|..-
T Consensus 574 ~~-----~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd 645 (755)
T KOG2100|consen 574 WD-----FRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTD 645 (755)
T ss_pred hh-----HHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceee
Confidence 11 111222222223346777777777766 456999999999999999965 443 4 677799998864
No 124
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=98.32 E-value=7.1e-07 Score=73.59 Aligned_cols=49 Identities=18% Similarity=0.252 Sum_probs=38.0
Q ss_pred HHHHHHHHHhcCCCeEE-EEEEeccHHHHHHhccC--CCccEEEEecCCCCC
Q 030535 111 AKSVIAALKSKGVSAIG-AAGFCWGGVVAAKLASS--HDIQAAVVLHPGAIT 159 (175)
Q Consensus 111 ~~~~~~~l~~~~~~~i~-v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~~~~ 159 (175)
++...+.+++.+++++. ++||||||.+++.+|.. ++++++|+++.....
T Consensus 147 ~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~~ 198 (389)
T PRK06765 147 VRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQN 198 (389)
T ss_pred HHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCCC
Confidence 44555555566888886 99999999999998853 489999999876543
No 125
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.32 E-value=5.5e-06 Score=60.81 Aligned_cols=85 Identities=15% Similarity=0.192 Sum_probs=55.7
Q ss_pred EEEecCCCCCC-cchHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhc--C
Q 030535 46 ILLISDVFGYE-APLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK--G 122 (175)
Q Consensus 46 vv~lhg~~g~~-~~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~--~ 122 (175)
|+++||..+.. .+.+.++.+.|... ++|-.+|+ -. .+++.+++.|.+. .
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~--~~-------------------------P~~~~W~~~l~~~i~~ 52 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW--DN-------------------------PDLDEWVQALDQAIDA 52 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC----TS---------------------------HHHHHHHHHHCCHC
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc--CC-------------------------CCHHHHHHHHHHHHhh
Confidence 68899776643 35677888888777 88888775 11 2234444444443 1
Q ss_pred -CCeEEEEEEeccHHHHHHhc-c--CCCccEEEEecCCCC
Q 030535 123 -VSAIGAAGFCWGGVVAAKLA-S--SHDIQAAVVLHPGAI 158 (175)
Q Consensus 123 -~~~i~v~G~S~GG~ia~~~a-~--~~~v~~~v~~~p~~~ 158 (175)
.+++.+||||.|...+++++ . ..+|+++++++|.-.
T Consensus 53 ~~~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 53 IDEPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDP 92 (171)
T ss_dssp -TTTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SC
T ss_pred cCCCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCc
Confidence 24699999999999999977 3 358999999999865
No 126
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.28 E-value=5e-06 Score=74.01 Aligned_cols=83 Identities=16% Similarity=0.138 Sum_probs=61.1
Q ss_pred HHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcC-----------------C
Q 030535 62 KLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKG-----------------V 123 (175)
Q Consensus 62 ~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~-----------------~ 123 (175)
.+.++|+++||+|+..|.+ .|.+. ..... ......+|..++|+|+..+. .
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~Se-G~~~~-----------~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~Wsn 337 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSD-GCPTT-----------GDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSN 337 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCC-CcCcc-----------CCHHHHHHHHHHHHHHhhCCccccccccccccccCCCC
Confidence 5678999999999999998 44433 11000 00122388999999998431 4
Q ss_pred CeEEEEEEeccHHHHHHhcc--CCCccEEEEecCC
Q 030535 124 SAIGAAGFCWGGVVAAKLAS--SHDIQAAVVLHPG 156 (175)
Q Consensus 124 ~~i~v~G~S~GG~ia~~~a~--~~~v~~~v~~~p~ 156 (175)
.+|+++|.||||.+++.+|. .+.++++|...+.
T Consensus 338 GkVGm~G~SY~G~~~~~aAa~~pp~LkAIVp~a~i 372 (767)
T PRK05371 338 GKVAMTGKSYLGTLPNAVATTGVEGLETIIPEAAI 372 (767)
T ss_pred CeeEEEEEcHHHHHHHHHHhhCCCcceEEEeeCCC
Confidence 69999999999999998764 3689999987655
No 127
>COG0400 Predicted esterase [General function prediction only]
Probab=98.24 E-value=3.1e-06 Score=63.92 Aligned_cols=110 Identities=18% Similarity=0.188 Sum_probs=62.5
Q ss_pred CCCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCCC---CC-CCC-CCCCchhhHHHHHHhcCCCcchhHHHHH
Q 030535 40 PDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFY---GD-PIV-DLNNPQFDREAWRKIHNTDKGYVDAKSV 114 (175)
Q Consensus 40 ~~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~~---g~-~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 114 (175)
+...|.||++||..+.. ..+..+.+.+.-+ +.++.+.=+. |. .+. .......+.+ ....+....
T Consensus 15 ~p~~~~iilLHG~Ggde-~~~~~~~~~~~P~-~~~is~rG~v~~~g~~~~f~~~~~~~~d~e---------dl~~~~~~~ 83 (207)
T COG0400 15 DPAAPLLILLHGLGGDE-LDLVPLPELILPN-ATLVSPRGPVAENGGPRFFRRYDEGSFDQE---------DLDLETEKL 83 (207)
T ss_pred CCCCcEEEEEecCCCCh-hhhhhhhhhcCCC-CeEEcCCCCccccCcccceeecCCCccchh---------hHHHHHHHH
Confidence 34567899999665543 4555555555443 6666665321 10 000 0000011111 111223333
Q ss_pred HHHHH----hcC--CCeEEEEEEeccHHHHHHhccC--CCccEEEEecCCCCCc
Q 030535 115 IAALK----SKG--VSAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPGAITV 160 (175)
Q Consensus 115 ~~~l~----~~~--~~~i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~~~~~ 160 (175)
.++++ +.+ .+++.++|||.|+.+++.+... ..++++|+++|.+..+
T Consensus 84 ~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~ 137 (207)
T COG0400 84 AEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLE 137 (207)
T ss_pred HHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCC
Confidence 33333 234 4799999999999999997743 4799999999988755
No 128
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.18 E-value=5.8e-06 Score=63.61 Aligned_cols=47 Identities=19% Similarity=0.178 Sum_probs=35.6
Q ss_pred HHHHHHHHHhcC---CCeEEEEEEeccHHHHHHhcc-C-CCccEEEEecCCC
Q 030535 111 AKSVIAALKSKG---VSAIGAAGFCWGGVVAAKLAS-S-HDIQAAVVLHPGA 157 (175)
Q Consensus 111 ~~~~~~~l~~~~---~~~i~v~G~S~GG~ia~~~a~-~-~~v~~~v~~~p~~ 157 (175)
.++++.+++++- .++.+|+|+||||..|+.++. . +...++++++|..
T Consensus 99 ~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~ 150 (251)
T PF00756_consen 99 TEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGAL 150 (251)
T ss_dssp HTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEES
T ss_pred hccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccc
Confidence 356677776652 223899999999999999884 4 4689999999763
No 129
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.11 E-value=1.5e-05 Score=65.81 Aligned_cols=132 Identities=17% Similarity=0.165 Sum_probs=85.7
Q ss_pred eEEEeeCCeeEEEE-ccCCCCCCeEEEEecCCCCCCcch-----HHHHHHHHHhCCCEEEeccCCCCCCCC-CC---CC-
Q 030535 22 GTVQQLGGLNTYVT-GSGPPDSKSAILLISDVFGYEAPL-----FRKLADKVAGAGFLVVAPDFFYGDPIV-DL---NN- 90 (175)
Q Consensus 22 ~~~~~~~~~~~~~~-~p~~~~~~~~vv~lhg~~g~~~~~-----~~~~a~~la~~G~~vi~~D~~~g~~~~-~~---~~- 90 (175)
....+.++.-..+. -|...+++|+|++.||.......+ -+.++-.|+++||.|=.-+.|+ ...+ .. ..
T Consensus 51 h~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RG-n~ySr~h~~l~~~ 129 (403)
T KOG2624|consen 51 HEVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRG-NTYSRKHKKLSPS 129 (403)
T ss_pred EEEEccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcC-cccchhhcccCCc
Confidence 33445666543333 244446789999999876543211 2567888999999999999763 2221 00 00
Q ss_pred chhhHHHHHHhcCCC-cchhHHHHHHHHHHhc-CCCeEEEEEEeccHHHHHHhcc-C----CCccEEEEecCCCC
Q 030535 91 PQFDREAWRKIHNTD-KGYVDAKSVIAALKSK-GVSAIGAAGFCWGGVVAAKLAS-S----HDIQAAVVLHPGAI 158 (175)
Q Consensus 91 ~~~~~~~~~~~~~~~-~~~~d~~~~~~~l~~~-~~~~i~v~G~S~GG~ia~~~a~-~----~~v~~~v~~~p~~~ 158 (175)
.+.++ | ....+ -..-|+-+.++++.+. +.+++..+|||.|+.+.+.+.. + .+|+..++++|+..
T Consensus 130 ~~~~F--W--~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~ 200 (403)
T KOG2624|consen 130 SDKEF--W--DFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAF 200 (403)
T ss_pred CCcce--e--ecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhh
Confidence 01111 1 01122 2347899999999875 6789999999999999998553 3 36999999999873
No 130
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.09 E-value=2.2e-05 Score=61.66 Aligned_cols=119 Identities=19% Similarity=0.205 Sum_probs=65.9
Q ss_pred EEEEccCCC-CCCeEEEEecCCCCCCcchHHHHH--HHHHh-CCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcc
Q 030535 32 TYVTGSGPP-DSKSAILLISDVFGYEAPLFRKLA--DKVAG-AGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKG 107 (175)
Q Consensus 32 ~~~~~p~~~-~~~~~vv~lhg~~g~~~~~~~~~a--~~la~-~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (175)
.+++.|... ...|.||+|||..+.- ..+.... +.|++ +||.|+-||-..+. + +.... ..|+...+...-
T Consensus 49 y~l~vP~g~~~~apLvv~LHG~~~sg-ag~~~~sg~d~lAd~~gFlV~yPdg~~~~-w-n~~~~----~~~~~p~~~~~g 121 (312)
T COG3509 49 YRLYVPPGLPSGAPLVVVLHGSGGSG-AGQLHGTGWDALADREGFLVAYPDGYDRA-W-NANGC----GNWFGPADRRRG 121 (312)
T ss_pred eEEEcCCCCCCCCCEEEEEecCCCCh-HHhhcccchhhhhcccCcEEECcCccccc-c-CCCcc----cccCCcccccCC
Confidence 444544432 3448899999887643 3333333 44555 59999999843221 1 00000 001000010111
Q ss_pred ---hhHHHHHHHHHHhc-C--CCeEEEEEEeccHHHHHHhccC-CC-ccEEEEecCCC
Q 030535 108 ---YVDAKSVIAALKSK-G--VSAIGAAGFCWGGVVAAKLASS-HD-IQAAVVLHPGA 157 (175)
Q Consensus 108 ---~~d~~~~~~~l~~~-~--~~~i~v~G~S~GG~ia~~~a~~-~~-v~~~v~~~p~~ 157 (175)
+..+.+.++-+..+ + ..+|++.|.|-||.++.+++.+ +. ..++..+++..
T Consensus 122 ~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 122 VDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred ccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 13445555555544 3 4599999999999999998865 54 45555555555
No 131
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.08 E-value=1.2e-05 Score=62.69 Aligned_cols=108 Identities=15% Similarity=0.154 Sum_probs=63.3
Q ss_pred CCeEEEEecCCCCCCcchHHHHHHHHH-hCCC--EEEeccCC-CCC-------CCC--CC------CCch-hhHHHHHHh
Q 030535 42 SKSAILLISDVFGYEAPLFRKLADKVA-GAGF--LVVAPDFF-YGD-------PIV--DL------NNPQ-FDREAWRKI 101 (175)
Q Consensus 42 ~~~~vv~lhg~~g~~~~~~~~~a~~la-~~G~--~vi~~D~~-~g~-------~~~--~~------~~~~-~~~~~~~~~ 101 (175)
..-+.||+||+.|.. ..+..+.+.+. ++|. .+++.+-- .|. +.. .| .+.. .+..+
T Consensus 10 ~~tPTifihG~~gt~-~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~---- 84 (255)
T PF06028_consen 10 STTPTIFIHGYGGTA-NSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKK---- 84 (255)
T ss_dssp S-EEEEEE--TTGGC-CCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHH----
T ss_pred CCCcEEEECCCCCCh-hHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHH----
Confidence 446799999777765 56788999997 6663 34333321 221 000 00 0111 11111
Q ss_pred cCCCcchhHHHHHHHHHHhc-CCCeEEEEEEeccHHHHHHhcc----C---CCccEEEEecCCCCC
Q 030535 102 HNTDKGYVDAKSVIAALKSK-GVSAIGAAGFCWGGVVAAKLAS----S---HDIQAAVVLHPGAIT 159 (175)
Q Consensus 102 ~~~~~~~~d~~~~~~~l~~~-~~~~i~v~G~S~GG~ia~~~a~----~---~~v~~~v~~~p~~~~ 159 (175)
...-+..++.+|+++ +.+++-++||||||..++.+.. + |++..+|.+.+..-.
T Consensus 85 -----qa~wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng 145 (255)
T PF06028_consen 85 -----QAKWLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNG 145 (255)
T ss_dssp -----HHHHHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTT
T ss_pred -----HHHHHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCc
Confidence 114478889999887 5889999999999999998762 1 578999988876543
No 132
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.07 E-value=1.3e-05 Score=68.23 Aligned_cols=119 Identities=14% Similarity=0.098 Sum_probs=81.4
Q ss_pred CCeeE--EEEccCCCCCCeEEEEecCCC-C-C--CcchHHHHHH---HHHhCCCEEEeccCC-CCCCCCCCCCchhhHHH
Q 030535 28 GGLNT--YVTGSGPPDSKSAILLISDVF-G-Y--EAPLFRKLAD---KVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREA 97 (175)
Q Consensus 28 ~~~~~--~~~~p~~~~~~~~vv~lhg~~-g-~--~~~~~~~~a~---~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~ 97 (175)
+|+++ -++.|...++.|.++..+.+. . . .......... +|+.+||+|+..|.+ .+.+. ..-+...
T Consensus 28 DGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~Se-G~~~~~~---- 102 (563)
T COG2936 28 DGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSE-GVFDPES---- 102 (563)
T ss_pred CCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCC-cccceec----
Confidence 66664 446667767788888877221 1 1 1223344555 699999999999998 34333 1111000
Q ss_pred HHHhcCCCcchhHHHHHHHHHHhcC--CCeEEEEEEeccHHHHHHhccC--CCccEEEEecCCCC
Q 030535 98 WRKIHNTDKGYVDAKSVIAALKSKG--VSAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPGAI 158 (175)
Q Consensus 98 ~~~~~~~~~~~~d~~~~~~~l~~~~--~~~i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~~~ 158 (175)
. +..+|-.++|+|+.++. +.+++.+|.|++|...+.+|.+ |.+++++...+...
T Consensus 103 ------~-~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 103 ------S-REAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred ------c-ccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 0 12388999999999985 4699999999999999997754 68999997776654
No 133
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.01 E-value=3.4e-05 Score=58.72 Aligned_cols=88 Identities=13% Similarity=0.202 Sum_probs=46.6
Q ss_pred CCeEEEEecCCCCCCcchHHHHHHHHHhC--CCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHH
Q 030535 42 SKSAILLISDVFGYEAPLFRKLADKVAGA--GFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAAL 118 (175)
Q Consensus 42 ~~~~vv~lhg~~g~~~~~~~~~a~~la~~--G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l 118 (175)
+...||++||..|.. ..|..+.+.|... .+.-..+.++ ..... .. ....+..... .-++.+.+.+
T Consensus 3 ~~hLvV~vHGL~G~~-~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~--~~-T~~gI~~~g~--------rL~~eI~~~~ 70 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNP-ADMRYLKNHLEKIPEDLPNARIVVLGYSNNE--FK-TFDGIDVCGE--------RLAEEILEHI 70 (217)
T ss_pred CCEEEEEeCCCCCCH-HHHHHHHHHHHHhhhhcchhhhhhhcccccc--cc-cchhhHHHHH--------HHHHHHHHhc
Confidence 456899999888875 6788888877762 2211111111 11000 00 0011111110 1234444444
Q ss_pred HhcC--CCeEEEEEEeccHHHHHHh
Q 030535 119 KSKG--VSAIGAAGFCWGGVVAAKL 141 (175)
Q Consensus 119 ~~~~--~~~i~v~G~S~GG~ia~~~ 141 (175)
+... ..+|.++||||||.++..+
T Consensus 71 ~~~~~~~~~IsfIgHSLGGli~r~a 95 (217)
T PF05057_consen 71 KDYESKIRKISFIGHSLGGLIARYA 95 (217)
T ss_pred cccccccccceEEEecccHHHHHHH
Confidence 4332 2489999999999999763
No 134
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.00 E-value=0.00024 Score=57.01 Aligned_cols=133 Identities=14% Similarity=0.114 Sum_probs=81.6
Q ss_pred CCee-EEEEccCC-CCCCeEEEEecCCCCCC--cchHHHHHHHHHhCCCEEEeccCCC--CC--CCC--C------CCCc
Q 030535 28 GGLN-TYVTGSGP-PDSKSAILLISDVFGYE--APLFRKLADKVAGAGFLVVAPDFFY--GD--PIV--D------LNNP 91 (175)
Q Consensus 28 ~~~~-~~~~~p~~-~~~~~~vv~lhg~~g~~--~~~~~~~a~~la~~G~~vi~~D~~~--g~--~~~--~------~~~~ 91 (175)
++-+ .-+++|.. ......||++|+....- ......+.+.|.++||+.+++-++. .. +.. . ....
T Consensus 70 ~~~~flaL~~~~~~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~ 149 (310)
T PF12048_consen 70 GEERFLALWRPANSAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQ 149 (310)
T ss_pred CCEEEEEEEecccCCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCC
Confidence 4444 34443343 33556799999654321 1456778889999999999988763 21 000 0 0000
Q ss_pred hhhHH-----------HHHHhcCCCcchhHHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhcc-C--CCccEEEEecCCC
Q 030535 92 QFDRE-----------AWRKIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLAS-S--HDIQAAVVLHPGA 157 (175)
Q Consensus 92 ~~~~~-----------~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a~-~--~~v~~~v~~~p~~ 157 (175)
..+.. .-...........-+.+.+.++++++..+|+|+||+.|+..++++.. + +.++++|++++..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~ 229 (310)
T PF12048_consen 150 QLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYW 229 (310)
T ss_pred CcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCC
Confidence 00000 00000011233356788888888888778999999999999999653 3 3689999999887
Q ss_pred CCc
Q 030535 158 ITV 160 (175)
Q Consensus 158 ~~~ 160 (175)
...
T Consensus 230 p~~ 232 (310)
T PF12048_consen 230 PQP 232 (310)
T ss_pred Ccc
Confidence 654
No 135
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=97.97 E-value=1.1e-05 Score=61.24 Aligned_cols=52 Identities=31% Similarity=0.330 Sum_probs=42.0
Q ss_pred hHHHHHHHHHHhcC---CCeEEEEEEeccHHHHHHhcc-CCCccEEEEecCCCCCc
Q 030535 109 VDAKSVIAALKSKG---VSAIGAAGFCWGGVVAAKLAS-SHDIQAAVVLHPGAITV 160 (175)
Q Consensus 109 ~d~~~~~~~l~~~~---~~~i~v~G~S~GG~ia~~~a~-~~~v~~~v~~~p~~~~~ 160 (175)
+.++.+++||+++. .++|+|+|.|.||-+|+.+|. .+.|+++|+++|+....
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~~i~avVa~~ps~~~~ 59 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFPQISAVVAISPSSVVF 59 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSSSEEEEEEES--SB--
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCCCccEEEEeCCceeEe
Confidence 56889999999883 369999999999999999885 58999999999988754
No 136
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.95 E-value=2.3e-05 Score=60.04 Aligned_cols=88 Identities=15% Similarity=0.112 Sum_probs=55.3
Q ss_pred CCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHH-
Q 030535 41 DSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALK- 119 (175)
Q Consensus 41 ~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~- 119 (175)
.+..-++++|...|.. ..++.|...|.. .+.+++..|++..... ......++. .-++.+...+.
T Consensus 5 ~~~~~L~cfP~AGGsa-~~fr~W~~~lp~-~iel~avqlPGR~~r~-~ep~~~di~------------~Lad~la~el~~ 69 (244)
T COG3208 5 GARLRLFCFPHAGGSA-SLFRSWSRRLPA-DIELLAVQLPGRGDRF-GEPLLTDIE------------SLADELANELLP 69 (244)
T ss_pred CCCceEEEecCCCCCH-HHHHHHHhhCCc-hhheeeecCCCccccc-CCcccccHH------------HHHHHHHHHhcc
Confidence 3456688888777765 678999998865 5999999998432220 010111121 11222233332
Q ss_pred hcCCCeEEEEEEeccHHHHHHhcc
Q 030535 120 SKGVSAIGAAGFCWGGVVAAKLAS 143 (175)
Q Consensus 120 ~~~~~~i~v~G~S~GG~ia~~~a~ 143 (175)
-....+.+++||||||.+|.++|.
T Consensus 70 ~~~d~P~alfGHSmGa~lAfEvAr 93 (244)
T COG3208 70 PLLDAPFALFGHSMGAMLAFEVAR 93 (244)
T ss_pred ccCCCCeeecccchhHHHHHHHHH
Confidence 112358999999999999999884
No 137
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.92 E-value=0.00033 Score=57.24 Aligned_cols=117 Identities=14% Similarity=0.145 Sum_probs=72.1
Q ss_pred CCeeEEEEc-cCC--CCCCeEEEEecCCC---CCCc---chHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHH
Q 030535 28 GGLNTYVTG-SGP--PDSKSAILLISDVF---GYEA---PLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREA 97 (175)
Q Consensus 28 ~~~~~~~~~-p~~--~~~~~~vv~lhg~~---g~~~---~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~ 97 (175)
+....|+.+ |.. .+..|.||++|||. +... +.+..+...|. ...++++||- .. +. ..+
T Consensus 104 d~~s~Wlvk~P~~~~pk~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~-~~--~~~------- 171 (374)
T PF10340_consen 104 DSQSYWLVKAPNRFKPKSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTS-SD--EHG------- 171 (374)
T ss_pred ccceEEEEeCCcccCCCCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEeccccc-cc--cCC-------
Confidence 334467775 443 23569999999774 2221 11222333332 5699999974 21 00 000
Q ss_pred HHHhcCCCcchhHHHHHHHHHH-hcCCCeEEEEEEeccHHHHHHhcc---C----CCccEEEEecCCCCCc
Q 030535 98 WRKIHNTDKGYVDAKSVIAALK-SKGVSAIGAAGFCWGGVVAAKLAS---S----HDIQAAVVLHPGAITV 160 (175)
Q Consensus 98 ~~~~~~~~~~~~d~~~~~~~l~-~~~~~~i~v~G~S~GG~ia~~~a~---~----~~v~~~v~~~p~~~~~ 160 (175)
..++....++.+..++|. +.|.++|.++|-|.||.+++.+.. + +-.+.+|+++|.....
T Consensus 172 ----~~yPtQL~qlv~~Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 172 ----HKYPTQLRQLVATYDYLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred ----CcCchHHHHHHHHHHHHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 111222256777777887 568889999999999999997542 1 3478999999987644
No 138
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=97.91 E-value=7.9e-05 Score=69.71 Aligned_cols=96 Identities=13% Similarity=0.167 Sum_probs=64.4
Q ss_pred CeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhc
Q 030535 43 KSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK 121 (175)
Q Consensus 43 ~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~ 121 (175)
.+.++++||+.+.. ..|..+++.|.. ++.|+.++++ ++.+. . ...++... +...++.+++.
T Consensus 1068 ~~~l~~lh~~~g~~-~~~~~l~~~l~~-~~~v~~~~~~g~~~~~--~--~~~~l~~l------------a~~~~~~i~~~ 1129 (1296)
T PRK10252 1068 GPTLFCFHPASGFA-WQFSVLSRYLDP-QWSIYGIQSPRPDGPM--Q--TATSLDEV------------CEAHLATLLEQ 1129 (1296)
T ss_pred CCCeEEecCCCCch-HHHHHHHHhcCC-CCcEEEEECCCCCCCC--C--CCCCHHHH------------HHHHHHHHHhh
Confidence 46799999877765 678899998864 6999999987 44322 1 11222222 22333444432
Q ss_pred -CCCeEEEEEEeccHHHHHHhccC-----CCccEEEEecCC
Q 030535 122 -GVSAIGAAGFCWGGVVAAKLASS-----HDIQAAVVLHPG 156 (175)
Q Consensus 122 -~~~~i~v~G~S~GG~ia~~~a~~-----~~v~~~v~~~p~ 156 (175)
...++.++||||||.++.++|.. .++..++++.+.
T Consensus 1130 ~~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1130 QPHGPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDTW 1170 (1296)
T ss_pred CCCCCEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecCC
Confidence 23489999999999999998852 468888877653
No 139
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.90 E-value=0.00016 Score=58.41 Aligned_cols=107 Identities=12% Similarity=0.096 Sum_probs=71.3
Q ss_pred CCeEEEEecCCCCCCcchHHHHHHHHHhCC--CEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHH
Q 030535 42 SKSAILLISDVFGYEAPLFRKLADKVAGAG--FLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAAL 118 (175)
Q Consensus 42 ~~~~vv~lhg~~g~~~~~~~~~a~~la~~G--~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l 118 (175)
.+..+||+||............++...+.| ...+.+.++ .|.-. .....+.+.. ...++++.++++|
T Consensus 115 ~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~-~Yn~DreS~~---------~Sr~aLe~~lr~L 184 (377)
T COG4782 115 AKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLL-GYNYDRESTN---------YSRPALERLLRYL 184 (377)
T ss_pred CCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeee-ecccchhhhh---------hhHHHHHHHHHHH
Confidence 457788899443333355667888777776 477888888 44322 2332222221 1227899999999
Q ss_pred HhcC-CCeEEEEEEeccHHHHHHhc----c-C-----CCccEEEEecCCCC
Q 030535 119 KSKG-VSAIGAAGFCWGGVVAAKLA----S-S-----HDIQAAVVLHPGAI 158 (175)
Q Consensus 119 ~~~~-~~~i~v~G~S~GG~ia~~~a----~-~-----~~v~~~v~~~p~~~ 158 (175)
.+.. ..+|.|++||||..++..+- . . ..++-+|+.+|...
T Consensus 185 a~~~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD 235 (377)
T COG4782 185 ATDKPVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDID 235 (377)
T ss_pred HhCCCCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCC
Confidence 8764 67999999999999988633 1 1 25777888887764
No 140
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.89 E-value=0.00011 Score=57.24 Aligned_cols=97 Identities=16% Similarity=0.154 Sum_probs=67.0
Q ss_pred eEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhc-
Q 030535 44 SAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK- 121 (175)
Q Consensus 44 ~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~- 121 (175)
|++.++|+..|.- ..|..++..|... ..|+..+.+ .+....... ++. +-+..-++.+++.
T Consensus 1 ~pLF~fhp~~G~~-~~~~~L~~~l~~~-~~v~~l~a~g~~~~~~~~~----~l~------------~~a~~yv~~Ir~~Q 62 (257)
T COG3319 1 PPLFCFHPAGGSV-LAYAPLAAALGPL-LPVYGLQAPGYGAGEQPFA----SLD------------DMAAAYVAAIRRVQ 62 (257)
T ss_pred CCEEEEcCCCCcH-HHHHHHHHHhccC-ceeeccccCcccccccccC----CHH------------HHHHHHHHHHHHhC
Confidence 4688999888864 6788999999876 899998877 443220111 111 2234444455443
Q ss_pred CCCeEEEEEEeccHHHHHHhccC-----CCccEEEEecCCCC
Q 030535 122 GVSAIGAAGFCWGGVVAAKLASS-----HDIQAAVVLHPGAI 158 (175)
Q Consensus 122 ~~~~i~v~G~S~GG~ia~~~a~~-----~~v~~~v~~~p~~~ 158 (175)
+..+..+.|||+||.+|..+|.. ..|..++++.....
T Consensus 63 P~GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 63 PEGPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred CCCCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 55699999999999999998842 46778887776655
No 141
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=97.85 E-value=8.2e-05 Score=59.80 Aligned_cols=94 Identities=19% Similarity=0.134 Sum_probs=61.6
Q ss_pred eEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhc-
Q 030535 44 SAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK- 121 (175)
Q Consensus 44 ~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~- 121 (175)
..||++- |-....+ ..++..=++.||.|+-.+++ ++.+. ..+....+. ..+++++++...+
T Consensus 244 ~LvIC~E-GNAGFYE--vG~m~tP~~lgYsvLGwNhPGFagST-G~P~p~n~~-------------nA~DaVvQfAI~~L 306 (517)
T KOG1553|consen 244 DLVICFE-GNAGFYE--VGVMNTPAQLGYSVLGWNHPGFAGST-GLPYPVNTL-------------NAADAVVQFAIQVL 306 (517)
T ss_pred eEEEEec-CCccceE--eeeecChHHhCceeeccCCCCccccC-CCCCcccch-------------HHHHHHHHHHHHHc
Confidence 4455554 4332222 34566677889999999998 55443 233322222 2355566665543
Q ss_pred C--CCeEEEEEEeccHHHHHHhcc-CCCccEEEEec
Q 030535 122 G--VSAIGAAGFCWGGVVAAKLAS-SHDIQAAVVLH 154 (175)
Q Consensus 122 ~--~~~i~v~G~S~GG~ia~~~a~-~~~v~~~v~~~ 154 (175)
+ ...|.+.|+|.||..++.+|. .|.|+++|+-+
T Consensus 307 gf~~edIilygWSIGGF~~~waAs~YPdVkavvLDA 342 (517)
T KOG1553|consen 307 GFRQEDIILYGWSIGGFPVAWAASNYPDVKAVVLDA 342 (517)
T ss_pred CCCccceEEEEeecCCchHHHHhhcCCCceEEEeec
Confidence 3 467999999999999998875 49999999765
No 142
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=97.79 E-value=0.00019 Score=55.30 Aligned_cols=104 Identities=15% Similarity=0.154 Sum_probs=64.1
Q ss_pred eEEEEecCCCCCCcchHHHHHHHHHhCC-----CEEEeccCCC-----CC-------CCCCC--CCchhhHHHHHHhcCC
Q 030535 44 SAILLISDVFGYEAPLFRKLADKVAGAG-----FLVVAPDFFY-----GD-------PIVDL--NNPQFDREAWRKIHNT 104 (175)
Q Consensus 44 ~~vv~lhg~~g~~~~~~~~~a~~la~~G-----~~vi~~D~~~-----g~-------~~~~~--~~~~~~~~~~~~~~~~ 104 (175)
-+.||+||..|. ...+..++.+|..++ --++..|--. |. |..+. .....+..++
T Consensus 46 iPTIfIhGsgG~-asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~------ 118 (288)
T COG4814 46 IPTIFIHGSGGT-ASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQ------ 118 (288)
T ss_pred cceEEEecCCCC-hhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhH------
Confidence 458999966665 478899999998875 1333333111 10 00000 0011111111
Q ss_pred CcchhHHHHHHHHHHhc-CCCeEEEEEEeccHHHHHHhcc----C---CCccEEEEecCCC
Q 030535 105 DKGYVDAKSVIAALKSK-GVSAIGAAGFCWGGVVAAKLAS----S---HDIQAAVVLHPGA 157 (175)
Q Consensus 105 ~~~~~d~~~~~~~l~~~-~~~~i~v~G~S~GG~ia~~~a~----~---~~v~~~v~~~p~~ 157 (175)
..=+..++.+|+++ ++.++-++||||||.....|+. + |.+...|++.+..
T Consensus 119 ---s~wlk~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpf 176 (288)
T COG4814 119 ---SKWLKKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPF 176 (288)
T ss_pred ---HHHHHHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccc
Confidence 12367788899887 5789999999999999988662 2 6788888776544
No 143
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=97.79 E-value=6.2e-05 Score=60.88 Aligned_cols=115 Identities=17% Similarity=0.158 Sum_probs=65.9
Q ss_pred CCeEEEEecCCCCCCcchHH-------HHHHHHHhCC-------CEEEeccCCCCC-CCCCCCCchhhHHHHHHhcCCCc
Q 030535 42 SKSAILLISDVFGYEAPLFR-------KLADKVAGAG-------FLVVAPDFFYGD-PIVDLNNPQFDREAWRKIHNTDK 106 (175)
Q Consensus 42 ~~~~vv~lhg~~g~~~~~~~-------~~a~~la~~G-------~~vi~~D~~~g~-~~~~~~~~~~~~~~~~~~~~~~~ 106 (175)
...+||++|+..|.. .... .|-+.|..-| |-||..|..++. ..+.|.+.... .+.....-+..
T Consensus 50 ~~NaVli~HaLtG~~-h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~-g~~yg~~FP~~ 127 (368)
T COG2021 50 KDNAVLICHALTGDS-HAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPG-GKPYGSDFPVI 127 (368)
T ss_pred CCceEEEeccccCcc-cccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCC-CCccccCCCcc
Confidence 356799999777733 1111 1333343334 899999976432 22123322211 11111111122
Q ss_pred chhHHHHHHHHH-HhcCCCeEE-EEEEeccHHHHHHhccC--CCccEEEEecCCCC
Q 030535 107 GYVDAKSVIAAL-KSKGVSAIG-AAGFCWGGVVAAKLASS--HDIQAAVVLHPGAI 158 (175)
Q Consensus 107 ~~~d~~~~~~~l-~~~~~~~i~-v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~~~ 158 (175)
-+.|...+-+.+ ...|++++. |+|-||||+.++..+.. ++|+.+|.++.+..
T Consensus 128 ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r 183 (368)
T COG2021 128 TIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAAR 183 (368)
T ss_pred cHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheeccccc
Confidence 334555554555 445999876 89999999999997743 47888887776554
No 144
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=97.78 E-value=2.4e-05 Score=59.29 Aligned_cols=118 Identities=18% Similarity=0.089 Sum_probs=51.4
Q ss_pred CCeEEEEecCCCCCCcchH----HHHHHHHHhCCCEEEeccCCCCC-CCCCCCCc----------hhhHHHHHHhcC---
Q 030535 42 SKSAILLISDVFGYEAPLF----RKLADKVAGAGFLVVAPDFFYGD-PIVDLNNP----------QFDREAWRKIHN--- 103 (175)
Q Consensus 42 ~~~~vv~lhg~~g~~~~~~----~~~a~~la~~G~~vi~~D~~~g~-~~~~~~~~----------~~~~~~~~~~~~--- 103 (175)
+++-||+|||+.. +...+ ..+.+.|.+.++..+-+|-++-. +....... ......|+....
T Consensus 3 ~k~riLcLHG~~~-na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 81 (212)
T PF03959_consen 3 RKPRILCLHGYGQ-NAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDH 81 (212)
T ss_dssp ---EEEEE--TT---HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SG
T ss_pred CCceEEEeCCCCc-CHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcc
Confidence 3567999995544 33444 44556665547888888865321 11001100 011122333222
Q ss_pred -CCcchhHHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhcc----------CCCccEEEEecCCCCCcc
Q 030535 104 -TDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLAS----------SHDIQAAVVLHPGAITVD 161 (175)
Q Consensus 104 -~~~~~~d~~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a~----------~~~v~~~v~~~p~~~~~~ 161 (175)
.....+-++.+.+++++++. -.+|+|||+||.+|..++. .+.++.+|++++......
T Consensus 82 ~~~~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~ 149 (212)
T PF03959_consen 82 EYEGLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDP 149 (212)
T ss_dssp GG---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE
T ss_pred cccCHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCch
Confidence 12222334445555555442 3599999999999998662 135899999998877543
No 145
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=97.73 E-value=0.00028 Score=56.74 Aligned_cols=104 Identities=16% Similarity=0.132 Sum_probs=64.6
Q ss_pred EEeeCCee--E-EEEccCCCCCCeEEEEecCCCCCCcch--H-----HHHHHHHHhCCCEEEeccCC-CCCCCCCCCCch
Q 030535 24 VQQLGGLN--T-YVTGSGPPDSKSAILLISDVFGYEAPL--F-----RKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQ 92 (175)
Q Consensus 24 ~~~~~~~~--~-~~~~p~~~~~~~~vv~lhg~~g~~~~~--~-----~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~ 92 (175)
..+.+++. . .+..|+. .+.+.||+.-|-... .+. + ..+-+...+.|-+|+.++|| .|.+. .... .
T Consensus 116 ~Iq~D~~~IDt~~I~~~~a-~~~RWiL~s~GNg~~-~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~-G~~s-~ 191 (365)
T PF05677_consen 116 PIQYDGVKIDTMAIHQPEA-KPQRWILVSNGNGEC-YENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSST-GPPS-R 191 (365)
T ss_pred EEeeCCEEEEEEEeeCCCC-CCCcEEEEEcCChHH-hhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCC-CCCC-H
Confidence 34556644 2 3332333 356788888743332 222 1 12333333458999999999 67665 2322 1
Q ss_pred hhHHHHHHhcCCCcchhHHHHHHHHHHhc--C--CCeEEEEEEeccHHHHHHhcc
Q 030535 93 FDREAWRKIHNTDKGYVDAKSVIAALKSK--G--VSAIGAAGFCWGGVVAAKLAS 143 (175)
Q Consensus 93 ~~~~~~~~~~~~~~~~~d~~~~~~~l~~~--~--~~~i~v~G~S~GG~ia~~~a~ 143 (175)
. .++.|.+++++||+++ | .++|.+.|||.||.++..+..
T Consensus 192 ---~---------dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~ 234 (365)
T PF05677_consen 192 ---K---------DLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALK 234 (365)
T ss_pred ---H---------HHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHH
Confidence 2 2238899999999863 4 468999999999999887543
No 146
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=97.71 E-value=0.00068 Score=56.20 Aligned_cols=113 Identities=15% Similarity=0.130 Sum_probs=69.0
Q ss_pred eeEEEEccCCCC---CCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCCCCCCCC-CCCCchhhHHHHHHhcCCC
Q 030535 30 LNTYVTGSGPPD---SKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIV-DLNNPQFDREAWRKIHNTD 105 (175)
Q Consensus 30 ~~~~~~~p~~~~---~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~~g~~~~-~~~~~~~~~~~~~~~~~~~ 105 (175)
.+.+.+.|..+. ..|+||++.-..+...-..+.+.++|.+ |+.|+..|+. ++.. +..+.+-.+.++.
T Consensus 86 ~~L~~y~~~~~~~~~~~~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~--~p~~vp~~~~~f~ldDYi------ 156 (406)
T TIGR01849 86 CRLIHFKRQGFRAELPGPAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWV--NARMVPLSAGKFDLEDYI------ 156 (406)
T ss_pred eEEEEECCCCcccccCCCcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCC--CCCCCchhcCCCCHHHHH------
Confidence 445555443222 1257888775655443456889999998 9999999974 3220 1122222333332
Q ss_pred cchhHHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhc-----cC-C-CccEEEEecCCCC
Q 030535 106 KGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLA-----SS-H-DIQAAVVLHPGAI 158 (175)
Q Consensus 106 ~~~~d~~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a-----~~-~-~v~~~v~~~p~~~ 158 (175)
+-+..++ +..|.+ +.++|+|+||..++.++ .. + +++.++++.+...
T Consensus 157 ---~~l~~~i---~~~G~~-v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID 209 (406)
T TIGR01849 157 ---DYLIEFI---RFLGPD-IHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPID 209 (406)
T ss_pred ---HHHHHHH---HHhCCC-CcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCcc
Confidence 3334444 444655 99999999999987643 12 2 5899998877655
No 147
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=97.70 E-value=0.00024 Score=58.10 Aligned_cols=83 Identities=18% Similarity=0.266 Sum_probs=60.1
Q ss_pred CCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHh
Q 030535 41 DSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKS 120 (175)
Q Consensus 41 ~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~ 120 (175)
+..-.-||+.|-.|+. ..-+.++++|.++|+.|+-.|-- + =+.....+++..+|+..++++...
T Consensus 258 ~sd~~av~~SGDGGWr-~lDk~v~~~l~~~gvpVvGvdsL-R--------------YfW~~rtPe~~a~Dl~r~i~~y~~ 321 (456)
T COG3946 258 NSDTVAVFYSGDGGWR-DLDKEVAEALQKQGVPVVGVDSL-R--------------YFWSERTPEQIAADLSRLIRFYAR 321 (456)
T ss_pred CcceEEEEEecCCchh-hhhHHHHHHHHHCCCceeeeehh-h--------------hhhccCCHHHHHHHHHHHHHHHHH
Confidence 3556677787666664 55678999999999999999931 0 011112333444899999999987
Q ss_pred c-CCCeEEEEEEeccHHHHH
Q 030535 121 K-GVSAIGAAGFCWGGVVAA 139 (175)
Q Consensus 121 ~-~~~~i~v~G~S~GG~ia~ 139 (175)
+ +..++.++|+|||+-+--
T Consensus 322 ~w~~~~~~liGySfGADvlP 341 (456)
T COG3946 322 RWGAKRVLLIGYSFGADVLP 341 (456)
T ss_pred hhCcceEEEEeecccchhhH
Confidence 6 778999999999997654
No 148
>PRK04940 hypothetical protein; Provisional
Probab=97.66 E-value=0.00016 Score=53.37 Aligned_cols=39 Identities=18% Similarity=0.296 Sum_probs=30.8
Q ss_pred CeEEEEEEeccHHHHHHhccCCCccEEEEecCCCCCcccc
Q 030535 124 SAIGAAGFCWGGVVAAKLASSHDIQAAVVLHPGAITVDDI 163 (175)
Q Consensus 124 ~~i~v~G~S~GG~ia~~~a~~~~v~~~v~~~p~~~~~~~~ 163 (175)
+++.++|.|+||..|..+|..-.+ .+|+++|+....+.+
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g~-~aVLiNPAv~P~~~L 98 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCGI-RQVIFNPNLFPEENM 98 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHCC-CEEEECCCCChHHHH
Confidence 479999999999999999976555 456778888765533
No 149
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=97.66 E-value=0.0004 Score=57.20 Aligned_cols=111 Identities=16% Similarity=0.204 Sum_probs=70.6
Q ss_pred EEccCCCC-CCeEEEEecCCCC----CCcchHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcch
Q 030535 34 VTGSGPPD-SKSAILLISDVFG----YEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGY 108 (175)
Q Consensus 34 ~~~p~~~~-~~~~vv~lhg~~g----~~~~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (175)
.+.|..+. -.++++++|-+.. .+...-..+..+|.++|+.|+.+|++ .|. ........++++.
T Consensus 97 qy~p~~e~v~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~--nPd--~~~~~~~~edYi~-------- 164 (445)
T COG3243 97 QYKPLTEKVLKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWR--NPD--ASLAAKNLEDYIL-------- 164 (445)
T ss_pred ccCCCCCccCCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEecc--Cch--HhhhhccHHHHHH--------
Confidence 34344333 3466888885542 11122357899999999999999963 322 1111222333332
Q ss_pred hHHHHHHHHHHhc-CCCeEEEEEEeccHHHHHHhcc-C--CCccEEEEecCC
Q 030535 109 VDAKSVIAALKSK-GVSAIGAAGFCWGGVVAAKLAS-S--HDIQAAVVLHPG 156 (175)
Q Consensus 109 ~d~~~~~~~l~~~-~~~~i~v~G~S~GG~ia~~~a~-~--~~v~~~v~~~p~ 156 (175)
+++..+++.+++. +.++|-++|+|.||.+...++. . .+|+.++.+-..
T Consensus 165 e~l~~aid~v~~itg~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~ 216 (445)
T COG3243 165 EGLSEAIDTVKDITGQKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSP 216 (445)
T ss_pred HHHHHHHHHHHHHhCccccceeeEecchHHHHHHHHhhhhcccccceeeecc
Confidence 6677888888876 6689999999999999887542 2 358777765533
No 150
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.65 E-value=0.00022 Score=57.84 Aligned_cols=102 Identities=22% Similarity=0.188 Sum_probs=65.9
Q ss_pred CeEEEEecCCCCCCcchHHHHHHHHHhCCCE---EEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHH
Q 030535 43 KSAILLISDVFGYEAPLFRKLADKVAGAGFL---VVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALK 119 (175)
Q Consensus 43 ~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~---vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 119 (175)
.-+++++||. +.....+..+..+++..|+. ++.+++...... .... .... .-...+-+.+.
T Consensus 59 ~~pivlVhG~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~--~~~~------------ql~~~V~~~l~ 122 (336)
T COG1075 59 KEPIVLVHGL-GGGYGNFLPLDYRLAILGWLTNGVYAFELSGGDGT-YSLA--VRGE------------QLFAYVDEVLA 122 (336)
T ss_pred CceEEEEccC-cCCcchhhhhhhhhcchHHHhcccccccccccCCC-cccc--ccHH------------HHHHHHHHHHh
Confidence 3469999987 44446788888889988988 888887633111 0111 0001 11122222333
Q ss_pred hcCCCeEEEEEEeccHHHHHHhccC----CCccEEEEecCCCCCc
Q 030535 120 SKGVSAIGAAGFCWGGVVAAKLASS----HDIQAAVVLHPGAITV 160 (175)
Q Consensus 120 ~~~~~~i~v~G~S~GG~ia~~~a~~----~~v~~~v~~~p~~~~~ 160 (175)
..+..++.++||||||.++..++.. .+|+.++.+.+.....
T Consensus 123 ~~ga~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~Gt 167 (336)
T COG1075 123 KTGAKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHHGT 167 (336)
T ss_pred hcCCCceEEEeecccchhhHHHHhhcCccceEEEEEEeccCCCCc
Confidence 3356799999999999999987743 3789999888766544
No 151
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.61 E-value=0.00044 Score=57.19 Aligned_cols=84 Identities=18% Similarity=0.211 Sum_probs=57.6
Q ss_pred hHHHHHHHHHhCCCEE-----Ee-ccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcCCCeEEEEEEe
Q 030535 59 LFRKLADKVAGAGFLV-----VA-PDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFC 132 (175)
Q Consensus 59 ~~~~~a~~la~~G~~v-----i~-~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~v~G~S 132 (175)
.|..+.+.|.+.||.. .+ +|+|.... ....++ ..+...|+.+.+....++.|+|||
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~~~---------~~~~~~---------~~lk~~ie~~~~~~~~kv~li~HS 127 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLSPA---------ERDEYF---------TKLKQLIEEAYKKNGKKVVLIAHS 127 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhchh---------hHHHHH---------HHHHHHHHHHHHhcCCcEEEEEeC
Confidence 6889999999988732 22 55542211 112232 556677776666555699999999
Q ss_pred ccHHHHHHhcc--------CCCccEEEEecCCCCCc
Q 030535 133 WGGVVAAKLAS--------SHDIQAAVVLHPGAITV 160 (175)
Q Consensus 133 ~GG~ia~~~a~--------~~~v~~~v~~~p~~~~~ 160 (175)
|||.+++.+-. ++.|++.|.+++.....
T Consensus 128 mGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~Gs 163 (389)
T PF02450_consen 128 MGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFGGS 163 (389)
T ss_pred CCchHHHHHHHhccchhhHHhhhhEEEEeCCCCCCC
Confidence 99999997542 13699999999887753
No 152
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.54 E-value=0.00047 Score=53.65 Aligned_cols=39 Identities=10% Similarity=0.055 Sum_probs=32.4
Q ss_pred CCCeEEEEEEeccHHHHHHhc-cC-CCccEEEEecCCCCCc
Q 030535 122 GVSAIGAAGFCWGGVVAAKLA-SS-HDIQAAVVLHPGAITV 160 (175)
Q Consensus 122 ~~~~i~v~G~S~GG~ia~~~a-~~-~~v~~~v~~~p~~~~~ 160 (175)
+.++.+++|||+||.+++..- .. ..+.+..+++|++...
T Consensus 135 ~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlWw~ 175 (264)
T COG2819 135 NSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLWWH 175 (264)
T ss_pred CcccceeeeecchhHHHHHHHhcCcchhceeeeecchhhhC
Confidence 345799999999999999855 34 4789999999999854
No 153
>COG4099 Predicted peptidase [General function prediction only]
Probab=97.43 E-value=0.0012 Score=52.29 Aligned_cols=48 Identities=27% Similarity=0.223 Sum_probs=35.2
Q ss_pred HHHHHHHHhc---CCCeEEEEEEeccHHHHHHhcc-CC-CccEEEEecCCCCC
Q 030535 112 KSVIAALKSK---GVSAIGAAGFCWGGVVAAKLAS-SH-DIQAAVVLHPGAIT 159 (175)
Q Consensus 112 ~~~~~~l~~~---~~~~i~v~G~S~GG~ia~~~a~-~~-~v~~~v~~~p~~~~ 159 (175)
+.+.+.+.+. +.+||.++|.|+||..++.++. .| -..+++++++....
T Consensus 254 dli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d~ 306 (387)
T COG4099 254 DLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGDR 306 (387)
T ss_pred HHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCch
Confidence 3333344444 4569999999999999999874 45 47888888887763
No 154
>KOG3101 consensus Esterase D [General function prediction only]
Probab=97.39 E-value=0.00036 Score=52.62 Aligned_cols=110 Identities=19% Similarity=0.222 Sum_probs=56.0
Q ss_pred CeEEEEecCCCCCCcchH--HHHHHHH-HhCCCEEEeccCC-CCCCCCC----CC-------CchhhHHHHHHhcCCCcc
Q 030535 43 KSAILLISDVFGYEAPLF--RKLADKV-AGAGFLVVAPDFF-YGDPIVD----LN-------NPQFDREAWRKIHNTDKG 107 (175)
Q Consensus 43 ~~~vv~lhg~~g~~~~~~--~~~a~~l-a~~G~~vi~~D~~-~g~~~~~----~~-------~~~~~~~~~~~~~~~~~~ 107 (175)
-|++.++.|..=.+ +++ ..-.++. +.+|+.|+.||-- .|.-... .. ..+...+.|.+....-..
T Consensus 44 ~P~lf~LSGLTCT~-~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdY 122 (283)
T KOG3101|consen 44 CPVLFYLSGLTCTH-ENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDY 122 (283)
T ss_pred CceEEEecCCcccc-hhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHHH
Confidence 47788888554322 222 2334444 4469999999975 4421100 00 001122344332111100
Q ss_pred hhHHHHHHHHHHhc----CCCeEEEEEEeccHHHHHHhcc-CC-CccEEEEecC
Q 030535 108 YVDAKSVIAALKSK----GVSAIGAAGFCWGGVVAAKLAS-SH-DIQAAVVLHP 155 (175)
Q Consensus 108 ~~d~~~~~~~l~~~----~~~~i~v~G~S~GG~ia~~~a~-~~-~v~~~v~~~p 155 (175)
+ ..+..+.+.+. +..++++.||||||.-|+..+. ++ +-+.+..++|
T Consensus 123 v--~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAP 174 (283)
T KOG3101|consen 123 V--VKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAP 174 (283)
T ss_pred H--HHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceecccc
Confidence 0 12223333221 4568999999999999998663 32 4455554444
No 155
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.36 E-value=0.00071 Score=56.58 Aligned_cols=113 Identities=20% Similarity=0.157 Sum_probs=65.0
Q ss_pred CCeEEEEecCCCCCCcc--hHHHHHHHHHhC-CCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHH
Q 030535 42 SKSAILLISDVFGYEAP--LFRKLADKVAGA-GFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAA 117 (175)
Q Consensus 42 ~~~~vv~lhg~~g~~~~--~~~~~a~~la~~-G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 117 (175)
.+|++|++ ||-+.-.. ....+...||++ |=.++++-+| +|.+. +..+...+ .+.....++.++|+..++++
T Consensus 28 ~gpifl~~-ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~-P~~~~s~~---nL~yLt~~QALaD~a~F~~~ 102 (434)
T PF05577_consen 28 GGPIFLYI-GGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQ-PFGDLSTE---NLRYLTSEQALADLAYFIRY 102 (434)
T ss_dssp TSEEEEEE---SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB--TTGGGGGS---TTTC-SHHHHHHHHHHHHHH
T ss_pred CCCEEEEE-CCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCC-Cccccchh---hHHhcCHHHHHHHHHHHHHH
Confidence 35655555 45542211 112245556554 8889999999 89876 33322222 22234667778999999999
Q ss_pred HHhc----CCCeEEEEEEeccHHHHHHhcc-CC-CccEEEEecCCCCC
Q 030535 118 LKSK----GVSAIGAAGFCWGGVVAAKLAS-SH-DIQAAVVLHPGAIT 159 (175)
Q Consensus 118 l~~~----~~~~i~v~G~S~GG~ia~~~a~-~~-~v~~~v~~~p~~~~ 159 (175)
++++ ...+++++|-|+||.++..+-. .| .+.+.++.++.+..
T Consensus 103 ~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~a 150 (434)
T PF05577_consen 103 VKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQA 150 (434)
T ss_dssp HHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CCH
T ss_pred HHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceeee
Confidence 9954 2348999999999999998663 45 56777766665553
No 156
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=97.36 E-value=0.00044 Score=59.32 Aligned_cols=124 Identities=14% Similarity=0.067 Sum_probs=74.6
Q ss_pred eeCCeeEEEEccCCCCC--CeEEEEecCCC---CCCcc-hHHHHHHHHHhCCCEEEeccCCCCC-CCCCCCCchhhHHHH
Q 030535 26 QLGGLNTYVTGSGPPDS--KSAILLISDVF---GYEAP-LFRKLADKVAGAGFLVVAPDFFYGD-PIVDLNNPQFDREAW 98 (175)
Q Consensus 26 ~~~~~~~~~~~p~~~~~--~~~vv~lhg~~---g~~~~-~~~~~a~~la~~G~~vi~~D~~~g~-~~~~~~~~~~~~~~~ 98 (175)
..+.+...++.|..... .|++|++|||. +.... ........+..+...|+++.||-|. +.....+... ...
T Consensus 93 sEDCLylNV~tp~~~~~~~~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~--~gN 170 (545)
T KOG1516|consen 93 SEDCLYLNVYTPQGCSESKLPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAA--PGN 170 (545)
T ss_pred cCCCceEEEeccCCCccCCCCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCC--CCc
Confidence 34556666664444332 69999999874 22100 1233444455567999999998441 1000111100 000
Q ss_pred HHhcCCCcchhHHHHHHHHHHhc------CCCeEEEEEEeccHHHHHHhccCC----CccEEEEecCCCC
Q 030535 99 RKIHNTDKGYVDAKSVIAALKSK------GVSAIGAAGFCWGGVVAAKLASSH----DIQAAVVLHPGAI 158 (175)
Q Consensus 99 ~~~~~~~~~~~d~~~~~~~l~~~------~~~~i~v~G~S~GG~ia~~~a~~~----~v~~~v~~~p~~~ 158 (175)
....|...+++|++++ +.++|.++|||.||..+..+...+ ....+|..++...
T Consensus 171 -------~gl~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~ 233 (545)
T KOG1516|consen 171 -------LGLFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNAL 233 (545)
T ss_pred -------ccHHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccccc
Confidence 1125888999999886 467999999999999998876543 4556666665544
No 157
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=97.29 E-value=0.0015 Score=51.86 Aligned_cols=84 Identities=25% Similarity=0.286 Sum_probs=46.3
Q ss_pred HHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcC---CCeEEEEEEeccHH
Q 030535 61 RKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKG---VSAIGAAGFCWGGV 136 (175)
Q Consensus 61 ~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~---~~~i~v~G~S~GG~ 136 (175)
..+...+.++||.|+++||. -|.+. .. ....-... ++-++++.+.....+ ..+++++|||.||.
T Consensus 16 ~~~l~~~L~~GyaVv~pDY~Glg~~y--~~-~~~~a~av---------LD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~ 83 (290)
T PF03583_consen 16 APFLAAWLARGYAVVAPDYEGLGTPY--LN-GRSEAYAV---------LDAVRAARNLPPKLGLSPSSRVALWGYSQGGQ 83 (290)
T ss_pred HHHHHHHHHCCCEEEecCCCCCCCcc--cC-cHhHHHHH---------HHHHHHHHhcccccCCCCCCCEEEEeeCccHH
Confidence 44566666899999999985 34433 11 11111000 022222222222123 25899999999999
Q ss_pred HHHHhcc---C--C--C--ccEEEEecCC
Q 030535 137 VAAKLAS---S--H--D--IQAAVVLHPG 156 (175)
Q Consensus 137 ia~~~a~---~--~--~--v~~~v~~~p~ 156 (175)
.++..|. . + . +.+.+...|.
T Consensus 84 Aa~~AA~l~~~YApeL~~~l~Gaa~gg~~ 112 (290)
T PF03583_consen 84 AALWAAELAPSYAPELNRDLVGAAAGGPP 112 (290)
T ss_pred HHHHHHHHhHHhCcccccceeEEeccCCc
Confidence 9887552 1 3 3 5666665554
No 158
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.24 E-value=0.0047 Score=48.15 Aligned_cols=99 Identities=13% Similarity=0.123 Sum_probs=67.3
Q ss_pred eEEEEecCCCCCC-cchHHHHHHHHHhC-CCEEEeccCCCC--CCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHH
Q 030535 44 SAILLISDVFGYE-APLFRKLADKVAGA-GFLVVAPDFFYG--DPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALK 119 (175)
Q Consensus 44 ~~vv~lhg~~g~~-~~~~~~~a~~la~~-G~~vi~~D~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 119 (175)
.++|++||.+... ...+..+.+.+.+. |..|+..+...| .++ +. .+.+.+..+-+.++
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~leig~g~~~s~---------l~---------pl~~Qv~~~ce~v~ 85 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEIGDGIKDSS---------LM---------PLWEQVDVACEKVK 85 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEecCCcchhh---------hc---------cHHHHHHHHHHHHh
Confidence 4599999776532 23477888888776 899999997544 111 11 11244555555555
Q ss_pred hcC--CCeEEEEEEeccHHHHHHhcc---CCCccEEEEecCCCCCc
Q 030535 120 SKG--VSAIGAAGFCWGGVVAAKLAS---SHDIQAAVVLHPGAITV 160 (175)
Q Consensus 120 ~~~--~~~i~v~G~S~GG~ia~~~a~---~~~v~~~v~~~p~~~~~ 160 (175)
... .+...++|+|.||.++..++. ++.|+-.|++.+.....
T Consensus 86 ~m~~lsqGynivg~SQGglv~Raliq~cd~ppV~n~ISL~gPhaG~ 131 (296)
T KOG2541|consen 86 QMPELSQGYNIVGYSQGGLVARALIQFCDNPPVKNFISLGGPHAGI 131 (296)
T ss_pred cchhccCceEEEEEccccHHHHHHHHhCCCCCcceeEeccCCcCCc
Confidence 321 346899999999999998874 37899999888776643
No 159
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=97.21 E-value=0.0048 Score=46.81 Aligned_cols=115 Identities=18% Similarity=0.126 Sum_probs=68.4
Q ss_pred CCeEEEEecCCCCCC---cchHHHHHHHHHhCCCEEEeccCCCC-----CCCCCC-------CCchhhHHHHHHhcC-C-
Q 030535 42 SKSAILLISDVFGYE---APLFRKLADKVAGAGFLVVAPDFFYG-----DPIVDL-------NNPQFDREAWRKIHN-T- 104 (175)
Q Consensus 42 ~~~~vv~lhg~~g~~---~~~~~~~a~~la~~G~~vi~~D~~~g-----~~~~~~-------~~~~~~~~~~~~~~~-~- 104 (175)
.++-||+|||+..+. ......+.+.|... +-.+-+|-++- .+.... .+.+.+...|+.... .
T Consensus 4 ~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~ 82 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASF 82 (230)
T ss_pred CCceEEEecchhhccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccccc
Confidence 346699999766432 12234455666555 66666665531 111001 111122345665543 2
Q ss_pred ---CcchhHHHHHHHHHHhcC-CCeEEEEEEeccHHHHHHhcc----------CCCccEEEEecCCCCC
Q 030535 105 ---DKGYVDAKSVIAALKSKG-VSAIGAAGFCWGGVVAAKLAS----------SHDIQAAVVLHPGAIT 159 (175)
Q Consensus 105 ---~~~~~d~~~~~~~l~~~~-~~~i~v~G~S~GG~ia~~~a~----------~~~v~~~v~~~p~~~~ 159 (175)
....+-++-+.++++++| .+ +|+|||.|+.++..++. .|.++-+|++++....
T Consensus 83 ~~~~~~eesl~yl~~~i~enGPFD--GllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~ 149 (230)
T KOG2551|consen 83 TEYFGFEESLEYLEDYIKENGPFD--GLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFP 149 (230)
T ss_pred ccccChHHHHHHHHHHHHHhCCCc--cccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCC
Confidence 122233566677777775 35 89999999999998763 1467999999988876
No 160
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=97.17 E-value=0.0047 Score=52.26 Aligned_cols=108 Identities=17% Similarity=0.151 Sum_probs=62.1
Q ss_pred CCCeEEEEecCCCCCCcchHHHHH-----------HH-------HHhCCCEEEeccCCCC--CCCCCCCCchhhHHHHHH
Q 030535 41 DSKSAILLISDVFGYEAPLFRKLA-----------DK-------VAGAGFLVVAPDFFYG--DPIVDLNNPQFDREAWRK 100 (175)
Q Consensus 41 ~~~~~vv~lhg~~g~~~~~~~~~a-----------~~-------la~~G~~vi~~D~~~g--~~~~~~~~~~~~~~~~~~ 100 (175)
.+.|.||+++||.|+.. .+-.+. .. +.++ ..++-+|.+.| .+. ....+.
T Consensus 75 ~~~Pl~lwlnGGPG~ss-~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~-~~~l~iDqP~G~G~S~--~~~~~~------- 143 (462)
T PTZ00472 75 PEAPVLLWMTGGPGCSS-MFALLAENGPCLMNETTGDIYNNTYSWNNE-AYVIYVDQPAGVGFSY--ADKADY------- 143 (462)
T ss_pred CCCCEEEEECCCCcHHH-HHhhhccCCCeEEeCCCCceeECCcccccc-cCeEEEeCCCCcCccc--CCCCCC-------
Confidence 36799999999998752 221111 01 1111 46677776633 332 110000
Q ss_pred hcCCCcchhHHHHHHHHHHhc----CCCeEEEEEEeccHHHHHHhcc-----C---C----CccEEEEecCCCCC
Q 030535 101 IHNTDKGYVDAKSVIAALKSK----GVSAIGAAGFCWGGVVAAKLAS-----S---H----DIQAAVVLHPGAIT 159 (175)
Q Consensus 101 ~~~~~~~~~d~~~~~~~l~~~----~~~~i~v~G~S~GG~ia~~~a~-----~---~----~v~~~v~~~p~~~~ 159 (175)
.....+..+|+..+++.+.++ ...++.|+|+||||.++..+|. + + .++++++.+|....
T Consensus 144 ~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~dp 218 (462)
T PTZ00472 144 DHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTDP 218 (462)
T ss_pred CCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccCh
Confidence 011123346676666655433 2468999999999999987662 1 1 37888888877643
No 161
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.16 E-value=0.0092 Score=46.21 Aligned_cols=111 Identities=15% Similarity=0.071 Sum_probs=71.9
Q ss_pred CCCeEEEEecCCCCCCcchHHHHHHHHHhC-C--CEEEeccCC-C-CCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHH
Q 030535 41 DSKSAILLISDVFGYEAPLFRKLADKVAGA-G--FLVVAPDFF-Y-GDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVI 115 (175)
Q Consensus 41 ~~~~~vv~lhg~~g~~~~~~~~~a~~la~~-G--~~vi~~D~~-~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 115 (175)
..++.++++.|-.|.. ..+..++..|-.. + ..+.++..- + +.|.+-..+.... ....-.+.+.++-=+
T Consensus 27 ~~~~li~~IpGNPG~~-gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~------~~eifsL~~QV~HKl 99 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLL-GFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHT------NEEIFSLQDQVDHKL 99 (301)
T ss_pred CCceEEEEecCCCCch-hHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccc------cccccchhhHHHHHH
Confidence 4668888899888876 6889999998765 2 335555543 2 1221001111100 122223446677778
Q ss_pred HHHHhc--CCCeEEEEEEeccHHHHHHhcc-C---CCccEEEEecCCCC
Q 030535 116 AALKSK--GVSAIGAAGFCWGGVVAAKLAS-S---HDIQAAVVLHPGAI 158 (175)
Q Consensus 116 ~~l~~~--~~~~i~v~G~S~GG~ia~~~a~-~---~~v~~~v~~~p~~~ 158 (175)
+++++. ...+|.++|||-|+.+.+.+-. . -+|..++++.|...
T Consensus 100 aFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIe 148 (301)
T KOG3975|consen 100 AFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIE 148 (301)
T ss_pred HHHHHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHH
Confidence 888775 3469999999999999999763 2 26888998888765
No 162
>COG0627 Predicted esterase [General function prediction only]
Probab=97.12 E-value=0.003 Score=50.75 Aligned_cols=36 Identities=25% Similarity=0.178 Sum_probs=31.0
Q ss_pred eEEEEEEeccHHHHHHhcc-C-CCccEEEEecCCCCCc
Q 030535 125 AIGAAGFCWGGVVAAKLAS-S-HDIQAAVVLHPGAITV 160 (175)
Q Consensus 125 ~i~v~G~S~GG~ia~~~a~-~-~~v~~~v~~~p~~~~~ 160 (175)
+.+++||||||.-|+.+|. + ++.+.+.+++|.+.+.
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred CceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 7899999999999999884 5 5889999999887765
No 163
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.06 E-value=0.0057 Score=48.18 Aligned_cols=106 Identities=10% Similarity=0.122 Sum_probs=53.7
Q ss_pred CeEEEEecCCCCC--CcchHHHHHHHHHhC--CCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHH
Q 030535 43 KSAILLISDVFGY--EAPLFRKLADKVAGA--GFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAAL 118 (175)
Q Consensus 43 ~~~vv~lhg~~g~--~~~~~~~~a~~la~~--G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l 118 (175)
..+||+.||.+.. +...+..+.+.+.+. |..|..++.. ... .+.....++. ...+.++.+.+.+
T Consensus 5 ~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig--~~~-----~~D~~~s~f~-----~v~~Qv~~vc~~l 72 (279)
T PF02089_consen 5 PLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIG--NDP-----SEDVENSFFG-----NVNDQVEQVCEQL 72 (279)
T ss_dssp S--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SS--SSH-----HHHHHHHHHS-----HHHHHHHHHHHHH
T ss_pred CCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEEC--CCc-----chhhhhhHHH-----HHHHHHHHHHHHH
Confidence 3569999966542 222455555555443 7788887752 211 0111112221 1224455566666
Q ss_pred HhcC--CCeEEEEEEeccHHHHHHhcc---CCCccEEEEecCCCCCc
Q 030535 119 KSKG--VSAIGAAGFCWGGVVAAKLAS---SHDIQAAVVLHPGAITV 160 (175)
Q Consensus 119 ~~~~--~~~i~v~G~S~GG~ia~~~a~---~~~v~~~v~~~p~~~~~ 160 (175)
++.. .+.+.++|||.||.+...++. ++.|+-+|++.+.....
T Consensus 73 ~~~p~L~~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~Gv 119 (279)
T PF02089_consen 73 ANDPELANGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHMGV 119 (279)
T ss_dssp HH-GGGTT-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--TT-B
T ss_pred hhChhhhcceeeeeeccccHHHHHHHHHCCCCCceeEEEecCccccc
Confidence 5432 257999999999999998874 36899999999877654
No 164
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=97.03 E-value=0.013 Score=43.03 Aligned_cols=37 Identities=14% Similarity=0.262 Sum_probs=31.2
Q ss_pred CeEEEEEEeccHHHHHHhccC--CCccEEEEecCCCCCc
Q 030535 124 SAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPGAITV 160 (175)
Q Consensus 124 ~~i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~~~~~ 160 (175)
+++++++||.|..+++.++.. ..|.++++++|.-...
T Consensus 59 ~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~~~ 97 (181)
T COG3545 59 GPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPDVSR 97 (181)
T ss_pred CCeEEEEecccHHHHHHHHHhhhhccceEEEecCCCccc
Confidence 469999999999999998843 5899999999886544
No 165
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=97.00 E-value=0.00061 Score=58.64 Aligned_cols=111 Identities=17% Similarity=0.187 Sum_probs=72.5
Q ss_pred CCCeEEEEecCCCCCCc-chHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHH
Q 030535 41 DSKSAILLISDVFGYEA-PLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALK 119 (175)
Q Consensus 41 ~~~~~vv~lhg~~g~~~-~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 119 (175)
+++|.+|..+|+++... ..|..=-..|.++|+...-.|.|+|... ............+ .+-.+|..+++++|.
T Consensus 468 g~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~---G~~WHk~G~lakK---qN~f~Dfia~AeyLv 541 (712)
T KOG2237|consen 468 GSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEY---GEQWHKDGRLAKK---QNSFDDFIACAEYLV 541 (712)
T ss_pred CCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCccc---ccchhhccchhhh---cccHHHHHHHHHHHH
Confidence 47799999999998542 3333333345678999999998854322 1000000111111 233499999999999
Q ss_pred hcCC---CeEEEEEEeccHHHHHHhc-cCC-CccEEEEecCCC
Q 030535 120 SKGV---SAIGAAGFCWGGVVAAKLA-SSH-DIQAAVVLHPGA 157 (175)
Q Consensus 120 ~~~~---~~i~v~G~S~GG~ia~~~a-~~~-~v~~~v~~~p~~ 157 (175)
+++. +++++.|.|-||.++.... .+| .++|+|+--|.+
T Consensus 542 e~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~Vpfm 584 (712)
T KOG2237|consen 542 ENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFM 584 (712)
T ss_pred HcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcce
Confidence 9873 6899999999999999876 345 456666555544
No 166
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.99 E-value=0.0079 Score=53.25 Aligned_cols=46 Identities=20% Similarity=0.258 Sum_probs=30.1
Q ss_pred hHHHHHHHHHHhc--C--------CCeEEEEEEeccHHHHHHhccC-----CCccEEEEec
Q 030535 109 VDAKSVIAALKSK--G--------VSAIGAAGFCWGGVVAAKLASS-----HDIQAAVVLH 154 (175)
Q Consensus 109 ~d~~~~~~~l~~~--~--------~~~i~v~G~S~GG~ia~~~a~~-----~~v~~~v~~~ 154 (175)
+.+..+|+++.+. + +..+.++||||||.+|..+... ..|.-++..+
T Consensus 157 EYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITls 217 (973)
T KOG3724|consen 157 EYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLS 217 (973)
T ss_pred HHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhc
Confidence 4455555555443 1 3459999999999999987632 2466665444
No 167
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=96.97 E-value=0.0027 Score=54.99 Aligned_cols=112 Identities=17% Similarity=0.191 Sum_probs=75.4
Q ss_pred CCCeEEEEecCCCCCCc-chHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHH
Q 030535 41 DSKSAILLISDVFGYEA-PLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALK 119 (175)
Q Consensus 41 ~~~~~vv~lhg~~g~~~-~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 119 (175)
++.|.+|..-|.+|.+. ..+....-.|.++||.-..-.-|+|.- .....+...+.+.+ .+-..|+.++.++|.
T Consensus 446 g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGge---lG~~WYe~GK~l~K---~NTf~DFIa~a~~Lv 519 (682)
T COG1770 446 GSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGE---LGRAWYEDGKLLNK---KNTFTDFIAAARHLV 519 (682)
T ss_pred CCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccc---cChHHHHhhhhhhc---cccHHHHHHHHHHHH
Confidence 46788999998888543 345555567889998766666665532 22222222333322 233489999999999
Q ss_pred hcC---CCeEEEEEEeccHHHHHHhcc-CC-CccEEEEecCCCC
Q 030535 120 SKG---VSAIGAAGFCWGGVVAAKLAS-SH-DIQAAVVLHPGAI 158 (175)
Q Consensus 120 ~~~---~~~i~v~G~S~GG~ia~~~a~-~~-~v~~~v~~~p~~~ 158 (175)
+.+ .++|+++|-|.||+++...+. .| ..+++|+.-|-..
T Consensus 520 ~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVD 563 (682)
T COG1770 520 KEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVD 563 (682)
T ss_pred HcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccc
Confidence 885 358999999999999999774 34 5677776666543
No 168
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.86 E-value=0.009 Score=48.76 Aligned_cols=104 Identities=23% Similarity=0.299 Sum_probs=68.5
Q ss_pred eeCCeeEEEEccCC-----CCCCeEEEEecCCCCCCcchHHHHHHHHHhC---C------CEEEeccCC-CCCCCCCCCC
Q 030535 26 QLGGLNTYVTGSGP-----PDSKSAILLISDVFGYEAPLFRKLADKVAGA---G------FLVVAPDFF-YGDPIVDLNN 90 (175)
Q Consensus 26 ~~~~~~~~~~~p~~-----~~~~~~vv~lhg~~g~~~~~~~~~a~~la~~---G------~~vi~~D~~-~g~~~~~~~~ 90 (175)
+++|+++++..-.+ .....+++++|||.|+-+ .+..+...|-+. | |-||+|.++ +|-+. .+..
T Consensus 130 eIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~-EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd-~~sk 207 (469)
T KOG2565|consen 130 EIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVR-EFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSD-APSK 207 (469)
T ss_pred hhcceeEEEEEecCCccccCCcccceEEecCCCchHH-HHHhhhhhhcCccccCCccceeEEEeccCCCCcccCc-CCcc
Confidence 67888875542121 123467999999988764 466788877654 4 789999998 77443 1111
Q ss_pred chhhHHHHHHhcCCCcchhHHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhcc
Q 030535 91 PQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLAS 143 (175)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a~ 143 (175)
.-+.+. +-+.-+-+.+...|.++..|-|-.||+.|+..+|.
T Consensus 208 --~GFn~~----------a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlas 248 (469)
T KOG2565|consen 208 --TGFNAA----------ATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLAS 248 (469)
T ss_pred --CCccHH----------HHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHh
Confidence 111111 23344445555668999999999999999999884
No 169
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.83 E-value=0.0045 Score=47.38 Aligned_cols=49 Identities=24% Similarity=0.206 Sum_probs=36.2
Q ss_pred HHHHHHHHhc---CCCeEEEEEEeccHHHHHHhccC------CCccEEEEecCCCCCc
Q 030535 112 KSVIAALKSK---GVSAIGAAGFCWGGVVAAKLASS------HDIQAAVVLHPGAITV 160 (175)
Q Consensus 112 ~~~~~~l~~~---~~~~i~v~G~S~GG~ia~~~a~~------~~v~~~v~~~p~~~~~ 160 (175)
..+++++++. ..++|.+.|||.||.+|...+.. ++|..+..+.+.....
T Consensus 69 ~~A~~yl~~~~~~~~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf~~ 126 (224)
T PF11187_consen 69 KSALAYLKKIAKKYPGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGFSE 126 (224)
T ss_pred HHHHHHHHHHHHhCCCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCCCh
Confidence 4455555543 34469999999999999986632 4899999888877654
No 170
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=96.83 E-value=0.045 Score=42.40 Aligned_cols=93 Identities=22% Similarity=0.382 Sum_probs=55.4
Q ss_pred EEEccCCCCCCeEEEEecCCC-CCC-cchHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhH
Q 030535 33 YVTGSGPPDSKSAILLISDVF-GYE-APLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVD 110 (175)
Q Consensus 33 ~~~~p~~~~~~~~vv~lhg~~-g~~-~~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d 110 (175)
|+..|. ++...|-|+-|.+ |.. .-.|+.+.+.|+++||.|++--|..+- +........+ ..
T Consensus 9 wvl~P~--~P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~tf-----DH~~~A~~~~----------~~ 71 (250)
T PF07082_consen 9 WVLIPP--RPKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVVTF-----DHQAIAREVW----------ER 71 (250)
T ss_pred EEEeCC--CCCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCCCC-----cHHHHHHHHH----------HH
Confidence 555433 3444444444433 322 235899999999999999997653221 1111111111 33
Q ss_pred HHHHHHHHHhcC-----CCeEEEEEEeccHHHHHHhc
Q 030535 111 AKSVIAALKSKG-----VSAIGAAGFCWGGVVAAKLA 142 (175)
Q Consensus 111 ~~~~~~~l~~~~-----~~~i~v~G~S~GG~ia~~~a 142 (175)
.+.+++.+.+++ .-++.-+|||+|.-+-+.+.
T Consensus 72 f~~~~~~L~~~~~~~~~~lP~~~vGHSlGcklhlLi~ 108 (250)
T PF07082_consen 72 FERCLRALQKRGGLDPAYLPVYGVGHSLGCKLHLLIG 108 (250)
T ss_pred HHHHHHHHHHhcCCCcccCCeeeeecccchHHHHHHh
Confidence 556666776542 13678899999999988766
No 171
>PLN02606 palmitoyl-protein thioesterase
Probab=96.67 E-value=0.04 Score=43.95 Aligned_cols=101 Identities=14% Similarity=0.063 Sum_probs=61.1
Q ss_pred eEEEEecCCCC-CCcchHHHHHHHHHhC-CCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhc
Q 030535 44 SAILLISDVFG-YEAPLFRKLADKVAGA-GFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK 121 (175)
Q Consensus 44 ~~vv~lhg~~g-~~~~~~~~~a~~la~~-G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~ 121 (175)
.+||+.||.+. .....+..+.+.+... |+-+...-...+ . .. + ++ ....+.++.+-+.+++.
T Consensus 27 ~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~ig~~--~--~~----s---~~-----~~~~~Qv~~vce~l~~~ 90 (306)
T PLN02606 27 VPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVEIGNG--V--QD----S---LF-----MPLRQQASIACEKIKQM 90 (306)
T ss_pred CCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEEECCC--c--cc----c---cc-----cCHHHHHHHHHHHHhcc
Confidence 45999997652 3335788888888533 653333332111 1 00 0 10 11124455555555542
Q ss_pred C--CCeEEEEEEeccHHHHHHhcc---C-CCccEEEEecCCCCCc
Q 030535 122 G--VSAIGAAGFCWGGVVAAKLAS---S-HDIQAAVVLHPGAITV 160 (175)
Q Consensus 122 ~--~~~i~v~G~S~GG~ia~~~a~---~-~~v~~~v~~~p~~~~~ 160 (175)
. .+.+.++|||.||.+...++. + +.|+-+|++.+.....
T Consensus 91 ~~L~~G~naIGfSQGglflRa~ierc~~~p~V~nlISlggph~Gv 135 (306)
T PLN02606 91 KELSEGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGPHAGV 135 (306)
T ss_pred hhhcCceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCCcCCc
Confidence 1 236999999999999998773 3 5799999998877654
No 172
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=96.61 E-value=0.021 Score=41.77 Aligned_cols=82 Identities=21% Similarity=0.191 Sum_probs=50.5
Q ss_pred chHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHh-cCCCeEEEEEEeccH
Q 030535 58 PLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKS-KGVSAIGAAGFCWGG 135 (175)
Q Consensus 58 ~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~-~~~~~i~v~G~S~GG 135 (175)
..+..+++.|.. .+.++.+|++ .+... .... +.. ..+....+.+.+ .+..++.++|||+||
T Consensus 13 ~~~~~~~~~l~~-~~~v~~~~~~g~~~~~-~~~~---~~~------------~~~~~~~~~l~~~~~~~~~~l~g~s~Gg 75 (212)
T smart00824 13 HEYARLAAALRG-RRDVSALPLPGFGPGE-PLPA---SAD------------ALVEAQAEAVLRAAGGRPFVLVGHSSGG 75 (212)
T ss_pred HHHHHHHHhcCC-CccEEEecCCCCCCCC-CCCC---CHH------------HHHHHHHHHHHHhcCCCCeEEEEECHHH
Confidence 567788888865 5899999987 44322 1111 111 112222333332 234589999999999
Q ss_pred HHHHHhccC-----CCccEEEEecCC
Q 030535 136 VVAAKLASS-----HDIQAAVVLHPG 156 (175)
Q Consensus 136 ~ia~~~a~~-----~~v~~~v~~~p~ 156 (175)
.++..++.. ..+.+++++.+.
T Consensus 76 ~~a~~~a~~l~~~~~~~~~l~~~~~~ 101 (212)
T smart00824 76 LLAHAVAARLEARGIPPAAVVLLDTY 101 (212)
T ss_pred HHHHHHHHHHHhCCCCCcEEEEEccC
Confidence 999887742 357777766543
No 173
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.53 E-value=0.0049 Score=50.83 Aligned_cols=99 Identities=18% Similarity=0.292 Sum_probs=63.4
Q ss_pred eEEEEecCCCC------CCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHH
Q 030535 44 SAILLISDVFG------YEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIA 116 (175)
Q Consensus 44 ~~vv~lhg~~g------~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 116 (175)
.+|+|..|--| .+...+-++|++| +-.++-..+| +|.+. +...........+...+.++..+|...++.
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~---~AllVFaEHRyYGeS~-PFG~~s~k~~~hlgyLtseQALADfA~ll~ 156 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPEL---KALLVFAEHRYYGESL-PFGSQSYKDARHLGYLTSEQALADFAELLT 156 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhh---CceEEEeehhccccCC-CCcchhccChhhhccccHHHHHHHHHHHHH
Confidence 34666665433 1122334444444 4456666677 88876 444333333344445566788899999999
Q ss_pred HHHhc---CCCeEEEEEEeccHHHHHHhc-cCCC
Q 030535 117 ALKSK---GVSAIGAAGFCWGGVVAAKLA-SSHD 146 (175)
Q Consensus 117 ~l~~~---~~~~i~v~G~S~GG~ia~~~a-~~~~ 146 (175)
.++.. ...+++++|-|+||+++..+= +.|.
T Consensus 157 ~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPH 190 (492)
T KOG2183|consen 157 FLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPH 190 (492)
T ss_pred HHhhccccccCcEEEecCchhhHHHHHHHhcChh
Confidence 99875 246899999999999998764 3454
No 174
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=96.45 E-value=0.016 Score=50.13 Aligned_cols=88 Identities=15% Similarity=0.121 Sum_probs=56.4
Q ss_pred HHHHHHHHHhCCCEEEeccCCCCCCCC-CCCC-chhhHHHHHHhcCCCcchhHHHHHHHHHHhc-CCCeEEEEEEeccHH
Q 030535 60 FRKLADKVAGAGFLVVAPDFFYGDPIV-DLNN-PQFDREAWRKIHNTDKGYVDAKSVIAALKSK-GVSAIGAAGFCWGGV 136 (175)
Q Consensus 60 ~~~~a~~la~~G~~vi~~D~~~g~~~~-~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~-~~~~i~v~G~S~GG~ 136 (175)
|..+.+.|++.||. --|+ ++.|.. .... ......+++ ..+...|+.+.+. +..++.|+||||||.
T Consensus 158 w~kLIe~L~~iGY~--~~nL-~gAPYDWRls~~~le~rd~YF---------~rLK~lIE~ay~~nggkKVVLV~HSMGgl 225 (642)
T PLN02517 158 WAVLIANLARIGYE--EKNM-YMAAYDWRLSFQNTEVRDQTL---------SRLKSNIELMVATNGGKKVVVVPHSMGVL 225 (642)
T ss_pred HHHHHHHHHHcCCC--CCce-eecccccccCccchhhhhHHH---------HHHHHHHHHHHHHcCCCeEEEEEeCCchH
Confidence 47899999999996 2333 232221 0000 001122343 5577778877654 457999999999999
Q ss_pred HHHHhcc-----------------CCCccEEEEecCCCCC
Q 030535 137 VAAKLAS-----------------SHDIQAAVVLHPGAIT 159 (175)
Q Consensus 137 ia~~~a~-----------------~~~v~~~v~~~p~~~~ 159 (175)
+++.+-. ++.|++.|.++|.+..
T Consensus 226 v~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 226 YFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred HHHHHHHhccccccccCCcchHHHHHHHHHheecccccCC
Confidence 9997421 1258899998887775
No 175
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=96.44 E-value=0.16 Score=40.37 Aligned_cols=117 Identities=19% Similarity=0.202 Sum_probs=73.4
Q ss_pred CCeeEEEEccCCCCCCeEEEEecCCCCCCcchHHH-----HHHHHHhCCCEEEeccCC-C--CCCCCCCCC-chhhHHHH
Q 030535 28 GGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRK-----LADKVAGAGFLVVAPDFF-Y--GDPIVDLNN-PQFDREAW 98 (175)
Q Consensus 28 ~~~~~~~~~p~~~~~~~~vv~lhg~~g~~~~~~~~-----~a~~la~~G~~vi~~D~~-~--g~~~~~~~~-~~~~~~~~ 98 (175)
|.+..+++- .+++++|++|-.|+..=.+..++.. -+..+.++ |.++-.|-+ + |.+. -+.+ ..-++.+.
T Consensus 32 G~v~V~V~G-d~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~-~p~~y~yPsmd~L 108 (326)
T KOG2931|consen 32 GVVHVTVYG-DPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPS-FPEGYPYPSMDDL 108 (326)
T ss_pred ccEEEEEec-CCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCcc-CCCCCCCCCHHHH
Confidence 556777762 2233678888888654322222333 24456667 999999976 3 2222 0111 11222222
Q ss_pred HHhcCCCcchhHHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhccC--CCccEEEEecCCCCC
Q 030535 99 RKIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPGAIT 159 (175)
Q Consensus 99 ~~~~~~~~~~~d~~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~~~~ 159 (175)
.+++..+++++ +.+.+.-+|--.|+.|-.++|.. +||-++|++++....
T Consensus 109 ---------Ad~l~~VL~~f---~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a 159 (326)
T KOG2931|consen 109 ---------ADMLPEVLDHF---GLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCA 159 (326)
T ss_pred ---------HHHHHHHHHhc---CcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCC
Confidence 26677777777 45688889999999999998843 599999999987654
No 176
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.42 E-value=0.0069 Score=42.19 Aligned_cols=21 Identities=29% Similarity=0.300 Sum_probs=18.5
Q ss_pred CCCeEEEEEEeccHHHHHHhc
Q 030535 122 GVSAIGAAGFCWGGVVAAKLA 142 (175)
Q Consensus 122 ~~~~i~v~G~S~GG~ia~~~a 142 (175)
+..+|.+.|||+||.+|..++
T Consensus 62 ~~~~i~itGHSLGGalA~l~a 82 (140)
T PF01764_consen 62 PDYSIVITGHSLGGALASLAA 82 (140)
T ss_dssp TTSEEEEEEETHHHHHHHHHH
T ss_pred cCccchhhccchHHHHHHHHH
Confidence 346899999999999999876
No 177
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=96.33 E-value=0.03 Score=42.09 Aligned_cols=111 Identities=17% Similarity=0.221 Sum_probs=58.5
Q ss_pred eEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCC-----------cchhHHH
Q 030535 44 SAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTD-----------KGYVDAK 112 (175)
Q Consensus 44 ~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~d~~ 112 (175)
..||++||. |.+...+..+++.|.-+...-+.|.-+..... ... ......|+....+. ...+-+.
T Consensus 4 atIi~LHgl-GDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt--~~~-G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~ 79 (206)
T KOG2112|consen 4 ATIIFLHGL-GDSGSGWAQFLKQLPLPNIKWICPTAPSRPVT--LNG-GAFMNAWFDIMELSSDAPEDEEGLHRAADNIA 79 (206)
T ss_pred EEEEEEecC-CCCCccHHHHHHcCCCCCeeEEcCCCCCCccc--ccC-CCcccceecceeeCcccchhhhHHHHHHHHHH
Confidence 469999954 44446666677776666666666643211100 000 00001122222111 1112233
Q ss_pred HHHHHHHhcC--CCeEEEEEEeccHHHHHHhccC--CCccEEEEecCCCC
Q 030535 113 SVIAALKSKG--VSAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPGAI 158 (175)
Q Consensus 113 ~~~~~l~~~~--~~~i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~~~ 158 (175)
..++..-+.+ .++|.+-|+||||.+++..+.. ..+.++...++-..
T Consensus 80 ~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p 129 (206)
T KOG2112|consen 80 NLIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLP 129 (206)
T ss_pred HHHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccc
Confidence 3333333334 4699999999999999998743 35666665555544
No 178
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=96.32 E-value=0.011 Score=49.48 Aligned_cols=69 Identities=14% Similarity=0.220 Sum_probs=46.0
Q ss_pred hHHHHHHHHHhCCCE------EEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhc-CCCeEEEEEE
Q 030535 59 LFRKLADKVAGAGFL------VVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK-GVSAIGAAGF 131 (175)
Q Consensus 59 ~~~~~a~~la~~G~~------vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~-~~~~i~v~G~ 131 (175)
.|..+.+.|+.-||. -+.+|+|.+-.. ++. ..+++ ..+..-++.+.+. |.+++.|++|
T Consensus 125 ~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~~~--~e~----rd~yl---------~kLK~~iE~~~~~~G~kkVvlisH 189 (473)
T KOG2369|consen 125 YWHELIENLVGIGYERGKTLFGAPYDWRLSYHN--SEE----RDQYL---------SKLKKKIETMYKLNGGKKVVLISH 189 (473)
T ss_pred HHHHHHHHHHhhCcccCceeeccccchhhccCC--hhH----HHHHH---------HHHHHHHHHHHHHcCCCceEEEec
Confidence 578889999999985 344554422111 111 12233 5566777777654 5589999999
Q ss_pred eccHHHHHHhc
Q 030535 132 CWGGVVAAKLA 142 (175)
Q Consensus 132 S~GG~ia~~~a 142 (175)
|||+.+.+.+.
T Consensus 190 SMG~l~~lyFl 200 (473)
T KOG2369|consen 190 SMGGLYVLYFL 200 (473)
T ss_pred CCccHHHHHHH
Confidence 99999999865
No 179
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.30 E-value=0.011 Score=42.15 Aligned_cols=40 Identities=15% Similarity=0.164 Sum_probs=30.1
Q ss_pred CCCeEEEEEEeccHHHHHHhccC------CCccEEEEecCCCCCcc
Q 030535 122 GVSAIGAAGFCWGGVVAAKLASS------HDIQAAVVLHPGAITVD 161 (175)
Q Consensus 122 ~~~~i~v~G~S~GG~ia~~~a~~------~~v~~~v~~~p~~~~~~ 161 (175)
+..+|.++|||+||.+|..++.. ..+..++.+.+......
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~~~ 71 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVGNA 71 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcccch
Confidence 45699999999999999987732 25666777777766543
No 180
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=96.19 E-value=0.058 Score=42.64 Aligned_cols=118 Identities=17% Similarity=0.195 Sum_probs=63.1
Q ss_pred CCeeEEEEccCCC-CCCeEEEEecCCCCCCcchHHH-----HHHHHHhCCCEEEeccCC-CCCCCCC-CCC-chhhHHHH
Q 030535 28 GGLNTYVTGSGPP-DSKSAILLISDVFGYEAPLFRK-----LADKVAGAGFLVVAPDFF-YGDPIVD-LNN-PQFDREAW 98 (175)
Q Consensus 28 ~~~~~~~~~p~~~-~~~~~vv~lhg~~g~~~~~~~~-----~a~~la~~G~~vi~~D~~-~g~~~~~-~~~-~~~~~~~~ 98 (175)
|.+.+++. ... .++|++|-+|+..-++..++.. -++.+.+ .|.++-+|.+ +...... +.+ ..-++.
T Consensus 9 G~v~V~v~--G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~-~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd-- 83 (283)
T PF03096_consen 9 GSVHVTVQ--GDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQ-NFCIYHIDAPGQEEGAATLPEGYQYPSMD-- 83 (283)
T ss_dssp EEEEEEEE--SS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHT-TSEEEEEE-TTTSTT-----TT-----HH--
T ss_pred eEEEEEEE--ecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhh-ceEEEEEeCCCCCCCcccccccccccCHH--
Confidence 44566666 332 3689999999765333222332 2344554 4999999987 3322100 111 111222
Q ss_pred HHhcCCCcchhHHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhcc-C-CCccEEEEecCCCCCc
Q 030535 99 RKIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLAS-S-HDIQAAVVLHPGAITV 160 (175)
Q Consensus 99 ~~~~~~~~~~~d~~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a~-~-~~v~~~v~~~p~~~~~ 160 (175)
++.+++..+++++ +.+.+.-+|--.|+.|-.++|. . ++|.++|++++....+
T Consensus 84 -------~LAe~l~~Vl~~f---~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~ 137 (283)
T PF03096_consen 84 -------QLAEMLPEVLDHF---GLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAA 137 (283)
T ss_dssp -------HHHCTHHHHHHHH---T---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S--
T ss_pred -------HHHHHHHHHHHhC---CccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCc
Confidence 2336677777777 5678888999999999999884 3 5899999999988754
No 181
>COG3150 Predicted esterase [General function prediction only]
Probab=96.16 E-value=0.04 Score=40.21 Aligned_cols=51 Identities=22% Similarity=0.253 Sum_probs=34.3
Q ss_pred hHHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhccCCCccEEEEecCCCCCcccc
Q 030535 109 VDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSHDIQAAVVLHPGAITVDDI 163 (175)
Q Consensus 109 ~d~~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a~~~~v~~~v~~~p~~~~~~~~ 163 (175)
+.++.++... +...++++|-|.||..+.+++..-.++++ +++|...+-+.+
T Consensus 47 ~ele~~i~~~---~~~~p~ivGssLGGY~At~l~~~~Girav-~~NPav~P~e~l 97 (191)
T COG3150 47 KELEKAVQEL---GDESPLIVGSSLGGYYATWLGFLCGIRAV-VFNPAVRPYELL 97 (191)
T ss_pred HHHHHHHHHc---CCCCceEEeecchHHHHHHHHHHhCChhh-hcCCCcCchhhh
Confidence 4455555433 33459999999999999999876555544 457776654433
No 182
>PLN02633 palmitoyl protein thioesterase family protein
Probab=96.12 E-value=0.14 Score=40.99 Aligned_cols=101 Identities=11% Similarity=0.107 Sum_probs=61.7
Q ss_pred eEEEEecCCCC-CCcchHHHHHHHHHhC-CCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhc
Q 030535 44 SAILLISDVFG-YEAPLFRKLADKVAGA-GFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK 121 (175)
Q Consensus 44 ~~vv~lhg~~g-~~~~~~~~~a~~la~~-G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~ 121 (175)
.++|+.||... +....+..+++.+.+. |..+..+-. |.+. ... |+ ....+.++.+-+.+++.
T Consensus 26 ~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i--g~~~-~~s--------~~-----~~~~~Qve~vce~l~~~ 89 (314)
T PLN02633 26 VPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI--GNGV-GDS--------WL-----MPLTQQAEIACEKVKQM 89 (314)
T ss_pred CCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE--CCCc-ccc--------ce-----eCHHHHHHHHHHHHhhc
Confidence 45889996653 3334677888877554 665554432 2221 111 11 11114455555555442
Q ss_pred C--CCeEEEEEEeccHHHHHHhcc---C-CCccEEEEecCCCCCc
Q 030535 122 G--VSAIGAAGFCWGGVVAAKLAS---S-HDIQAAVVLHPGAITV 160 (175)
Q Consensus 122 ~--~~~i~v~G~S~GG~ia~~~a~---~-~~v~~~v~~~p~~~~~ 160 (175)
. .+.+.++|||.||.+...++. + +.|+-.|++.+.....
T Consensus 90 ~~l~~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggph~Gv 134 (314)
T PLN02633 90 KELSQGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHAGI 134 (314)
T ss_pred hhhhCcEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCCCCCe
Confidence 1 236999999999999998773 3 5799999998777654
No 183
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=96.09 E-value=0.071 Score=42.35 Aligned_cols=121 Identities=12% Similarity=0.121 Sum_probs=68.3
Q ss_pred CCeeEEEEccCC---CCCCeEEEEecCCCCCCcchHHHHHHHHHhCC----CEEEeccCCCCCCCCCCCCchhhHHHHHH
Q 030535 28 GGLNTYVTGSGP---PDSKSAILLISDVFGYEAPLFRKLADKVAGAG----FLVVAPDFFYGDPIVDLNNPQFDREAWRK 100 (175)
Q Consensus 28 ~~~~~~~~~p~~---~~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G----~~vi~~D~~~g~~~~~~~~~~~~~~~~~~ 100 (175)
++.+.+++.|.. ..+.|.++++||-.-......-...+.|.+.| -.++.+|+- +.. ..+..
T Consensus 80 ~~~~~vv~lppgy~~~~k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~--d~~----------~R~~~ 147 (299)
T COG2382 80 SERRRVVYLPPGYNPLEKYPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYI--DVK----------KRREE 147 (299)
T ss_pred cceeEEEEeCCCCCccccccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCC--CHH----------HHHHH
Confidence 455555554443 23668888888543222233344555555554 577777742 111 00000
Q ss_pred hcCCCcch-hHHHHHHHHHHhc-----CCCeEEEEEEeccHHHHHHhccC--CCccEEEEecCCCCCc
Q 030535 101 IHNTDKGY-VDAKSVIAALKSK-----GVSAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPGAITV 160 (175)
Q Consensus 101 ~~~~~~~~-~d~~~~~~~l~~~-----~~~~i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~~~~~ 160 (175)
.+...... .-..+++=++++. ..+.=+|+|-|+||.+++..+.+ +++..+++.+|+....
T Consensus 148 ~~~n~~~~~~L~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~~ 215 (299)
T COG2382 148 LHCNEAYWRFLAQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWWT 215 (299)
T ss_pred hcccHHHHHHHHHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccccC
Confidence 00111111 2234555666655 23467899999999999998854 4788888888888754
No 184
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=95.94 E-value=0.03 Score=42.31 Aligned_cols=36 Identities=17% Similarity=0.219 Sum_probs=28.4
Q ss_pred hhHHHHHHHHHHhc-CC-CeEEEEEEeccHHHHHHhcc
Q 030535 108 YVDAKSVIAALKSK-GV-SAIGAAGFCWGGVVAAKLAS 143 (175)
Q Consensus 108 ~~d~~~~~~~l~~~-~~-~~i~v~G~S~GG~ia~~~a~ 143 (175)
..|+.++.++..++ +. .+++|+|||+|+.+.+++.+
T Consensus 77 y~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~ 114 (207)
T PF11288_consen 77 YSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLK 114 (207)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHH
Confidence 38888777776665 33 37999999999999998663
No 185
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=95.69 E-value=0.15 Score=39.10 Aligned_cols=101 Identities=14% Similarity=0.138 Sum_probs=67.5
Q ss_pred eEEEEecCCCCCC---cchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHH
Q 030535 44 SAILLISDVFGYE---APLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALK 119 (175)
Q Consensus 44 ~~vv~lhg~~g~~---~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 119 (175)
.-|||+- |.|.. -.+...++..|-+.+|..+.+-++ +-..+ ..... .+-.+|+...++.+.
T Consensus 37 ~~vvfiG-GLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~-Gt~sl-------------k~D~edl~~l~~Hi~ 101 (299)
T KOG4840|consen 37 VKVVFIG-GLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGY-GTFSL-------------KDDVEDLKCLLEHIQ 101 (299)
T ss_pred EEEEEEc-ccCCCccccccHHHHHHHHhhccceeeeeecccccccc-ccccc-------------cccHHHHHHHHHHhh
Confidence 4466664 54421 245788999999999999998875 22222 11111 122277888888777
Q ss_pred hcCC-CeEEEEEEeccHHHHHHhccC----CCccEEEEecCCCCC
Q 030535 120 SKGV-SAIGAAGFCWGGVVAAKLASS----HDIQAAVVLHPGAIT 159 (175)
Q Consensus 120 ~~~~-~~i~v~G~S~GG~ia~~~a~~----~~v~~~v~~~p~~~~ 159 (175)
..+. ..|.++|||-|-.=.+.|..+ ..|.++|+.+|.-..
T Consensus 102 ~~~fSt~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDr 146 (299)
T KOG4840|consen 102 LCGFSTDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDR 146 (299)
T ss_pred ccCcccceEEEecCccchHHHHHHHhccchHHHHHHHHhCccchh
Confidence 6654 489999999998888776522 358888888887653
No 186
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.55 E-value=0.032 Score=42.43 Aligned_cols=49 Identities=18% Similarity=0.168 Sum_probs=30.3
Q ss_pred HHHHHHHHHHhc-CCCeEEEEEEeccHHHHHHhccC-------CCccEEEEecCCCC
Q 030535 110 DAKSVIAALKSK-GVSAIGAAGFCWGGVVAAKLASS-------HDIQAAVVLHPGAI 158 (175)
Q Consensus 110 d~~~~~~~l~~~-~~~~i~v~G~S~GG~ia~~~a~~-------~~v~~~v~~~p~~~ 158 (175)
++...++.+++. +..+|.+.|||+||.+|..++.. ..+.++....|...
T Consensus 113 ~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~vg 169 (229)
T cd00519 113 QVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRVG 169 (229)
T ss_pred HHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCCC
Confidence 344444434333 34589999999999999987631 23555555555443
No 187
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=95.55 E-value=0.078 Score=44.84 Aligned_cols=110 Identities=16% Similarity=0.094 Sum_probs=69.4
Q ss_pred CCeEEEEecCCCCCCcchH-----HHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHH
Q 030535 42 SKSAILLISDVFGYEAPLF-----RKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVI 115 (175)
Q Consensus 42 ~~~~vv~lhg~~g~~~~~~-----~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 115 (175)
..|..|+|- |-|.....| ..+..+-.+.|-.|+...+| +|.+. +......+. ++.....+...|+..+|
T Consensus 85 ~gPiFLmIG-GEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~-P~~~~st~n---lk~LSs~QALaDla~fI 159 (514)
T KOG2182|consen 85 GGPIFLMIG-GEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSS-PIGDLSTSN---LKYLSSLQALADLAEFI 159 (514)
T ss_pred CCceEEEEc-CCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCC-CCCCCcccc---hhhhhHHHHHHHHHHHH
Confidence 457667675 444222111 23555555668999999999 89765 333333221 33445667779999999
Q ss_pred HHHHhcC----CCeEEEEEEeccHHHHHHhc-cCC-CccEEEEecCC
Q 030535 116 AALKSKG----VSAIGAAGFCWGGVVAAKLA-SSH-DIQAAVVLHPG 156 (175)
Q Consensus 116 ~~l~~~~----~~~i~v~G~S~GG~ia~~~a-~~~-~v~~~v~~~p~ 156 (175)
+.++.+. ..+-+.+|-|+-|.++..+= ..| .+.+.|+.+..
T Consensus 160 ~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSap 206 (514)
T KOG2182|consen 160 KAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAP 206 (514)
T ss_pred HHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccc
Confidence 9998762 23899999999998887654 345 44444444433
No 188
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=95.35 E-value=0.023 Score=41.98 Aligned_cols=50 Identities=20% Similarity=0.181 Sum_probs=34.4
Q ss_pred hHHHHHHH-HHHhcCCCeEEEEEEeccHHHHHHhccC--------CCccEEEEecCCCC
Q 030535 109 VDAKSVIA-ALKSKGVSAIGAAGFCWGGVVAAKLASS--------HDIQAAVVLHPGAI 158 (175)
Q Consensus 109 ~d~~~~~~-~l~~~~~~~i~v~G~S~GG~ia~~~a~~--------~~v~~~v~~~p~~~ 158 (175)
.++...++ +..++...+|.|+|+|+|+.++..+... .+|.+++++.-...
T Consensus 65 ~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~ 123 (179)
T PF01083_consen 65 ANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRR 123 (179)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTT
T ss_pred HHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcc
Confidence 34444444 4444566799999999999999986532 37888888775444
No 189
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=95.15 E-value=0.081 Score=39.04 Aligned_cols=54 Identities=15% Similarity=0.264 Sum_probs=39.1
Q ss_pred hHHHHHHHHHHhc--CCCeEEEEEEeccHHHHHHhccC--CCccEEEEecCCCCCccc
Q 030535 109 VDAKSVIAALKSK--GVSAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPGAITVDD 162 (175)
Q Consensus 109 ~d~~~~~~~l~~~--~~~~i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~~~~~~~ 162 (175)
.++..+++-|+.. +..++.++|||+|+.++-..+.. .+++.+|++........+
T Consensus 92 ~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~g~~~ 149 (177)
T PF06259_consen 92 PRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGMGVDS 149 (177)
T ss_pred HHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCCCCCC
Confidence 5566666666654 34589999999999999987754 578888877655555433
No 190
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=95.14 E-value=0.024 Score=48.80 Aligned_cols=108 Identities=20% Similarity=0.232 Sum_probs=72.5
Q ss_pred CCeEEEEecCCCCCC-cchHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHh
Q 030535 42 SKSAILLISDVFGYE-APLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKS 120 (175)
Q Consensus 42 ~~~~vv~lhg~~g~~-~~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~ 120 (175)
+.|.+|.--||+... .+.+......+.++|...+..+.|+|.-. .+..-+ ...+.+-++..+|..++.+.|.+
T Consensus 420 ~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEf-Gp~WH~-----Aa~k~nrq~vfdDf~AVaedLi~ 493 (648)
T COG1505 420 ENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEF-GPEWHQ-----AGMKENKQNVFDDFIAVAEDLIK 493 (648)
T ss_pred CCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCcc-CHHHHH-----HHhhhcchhhhHHHHHHHHHHHH
Confidence 678899888888633 24455555777889999999999855322 122111 11122334566999999999999
Q ss_pred cCC---CeEEEEEEeccHHHHHH-hccCCCc-cEEEEecC
Q 030535 121 KGV---SAIGAAGFCWGGVVAAK-LASSHDI-QAAVVLHP 155 (175)
Q Consensus 121 ~~~---~~i~v~G~S~GG~ia~~-~a~~~~v-~~~v~~~p 155 (175)
+++ .++++.|-|=||.++-. +.+.|.+ .++|.-.|
T Consensus 494 rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evP 533 (648)
T COG1505 494 RGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVP 533 (648)
T ss_pred hCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccc
Confidence 985 48999999999998876 3455544 44444333
No 191
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.77 E-value=0.45 Score=36.31 Aligned_cols=35 Identities=11% Similarity=0.255 Sum_probs=26.1
Q ss_pred CCCeEEEEEEeccHHHHHHhcc----CCCccEEEEecCC
Q 030535 122 GVSAIGAAGFCWGGVVAAKLAS----SHDIQAAVVLHPG 156 (175)
Q Consensus 122 ~~~~i~v~G~S~GG~ia~~~a~----~~~v~~~v~~~p~ 156 (175)
....++++.||+||...+.+.. +++|.++.+-...
T Consensus 188 ~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 188 KAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred CcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 4568999999999999998663 3567777654433
No 192
>PLN00413 triacylglycerol lipase
Probab=94.17 E-value=0.11 Score=43.91 Aligned_cols=47 Identities=13% Similarity=0.229 Sum_probs=31.0
Q ss_pred HHHHhcCCCeEEEEEEeccHHHHHHhcc----C------CCccEEEEecCCCCCccc
Q 030535 116 AALKSKGVSAIGAAGFCWGGVVAAKLAS----S------HDIQAAVVLHPGAITVDD 162 (175)
Q Consensus 116 ~~l~~~~~~~i~v~G~S~GG~ia~~~a~----~------~~v~~~v~~~p~~~~~~~ 162 (175)
+.+++.+..+|.+.|||+||.+|..+|. + .++..+..+.........
T Consensus 276 ~ll~~~p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PRVGN~~ 332 (479)
T PLN00413 276 EIFDQNPTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPRVGDED 332 (479)
T ss_pred HHHHHCCCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCCCccHH
Confidence 3333444568999999999999998662 1 245566666666554433
No 193
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=94.11 E-value=0.65 Score=39.83 Aligned_cols=83 Identities=19% Similarity=0.256 Sum_probs=51.4
Q ss_pred HHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhc--CCCeEEEEEEeccHHHH
Q 030535 61 RKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK--GVSAIGAAGFCWGGVVA 138 (175)
Q Consensus 61 ~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~--~~~~i~v~G~S~GG~ia 138 (175)
..+...|.+ |+-|+-..++ -.|. +. +.+.+.. .-...+++.+.++ +..+..|+|-|.||..+
T Consensus 91 SevG~AL~~-GHPvYFV~F~-p~P~--pg---QTl~DV~---------~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~ 154 (581)
T PF11339_consen 91 SEVGVALRA-GHPVYFVGFF-PEPE--PG---QTLEDVM---------RAEAAFVEEVAERHPDAPKPNLIGNCQGGWAA 154 (581)
T ss_pred cHHHHHHHc-CCCeEEEEec-CCCC--CC---CcHHHHH---------HHHHHHHHHHHHhCCCCCCceEEeccHHHHHH
Confidence 356666654 8988887764 2222 11 1222221 1123444444444 23489999999999999
Q ss_pred HHhc-cCCCccEEEEecCCCCC
Q 030535 139 AKLA-SSHDIQAAVVLHPGAIT 159 (175)
Q Consensus 139 ~~~a-~~~~v~~~v~~~p~~~~ 159 (175)
+++| ..+.+.+-+.++++.+.
T Consensus 155 ~mlAA~~Pd~~gplvlaGaPls 176 (581)
T PF11339_consen 155 MMLAALRPDLVGPLVLAGAPLS 176 (581)
T ss_pred HHHHhcCcCccCceeecCCCcc
Confidence 9977 45777777777877664
No 194
>PLN03037 lipase class 3 family protein; Provisional
Probab=93.79 E-value=0.05 Score=46.36 Aligned_cols=34 Identities=24% Similarity=0.397 Sum_probs=24.4
Q ss_pred hHHHHHHHHHHhcCC-CeEEEEEEeccHHHHHHhc
Q 030535 109 VDAKSVIAALKSKGV-SAIGAAGFCWGGVVAAKLA 142 (175)
Q Consensus 109 ~d~~~~~~~l~~~~~-~~i~v~G~S~GG~ia~~~a 142 (175)
+++..+++..++.+. .+|.+.|||+||.+|+..|
T Consensus 302 ~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA 336 (525)
T PLN03037 302 EEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNA 336 (525)
T ss_pred HHHHHHHHhccccCCcceEEEeccCHHHHHHHHHH
Confidence 455555555544332 3799999999999999876
No 195
>PLN02454 triacylglycerol lipase
Probab=93.68 E-value=0.084 Score=43.92 Aligned_cols=35 Identities=20% Similarity=0.126 Sum_probs=25.2
Q ss_pred hhHHHHHHHHHHhcC-CC--eEEEEEEeccHHHHHHhc
Q 030535 108 YVDAKSVIAALKSKG-VS--AIGAAGFCWGGVVAAKLA 142 (175)
Q Consensus 108 ~~d~~~~~~~l~~~~-~~--~i~v~G~S~GG~ia~~~a 142 (175)
.+++...++.+.+.. .. +|.+.|||+||.+|+..|
T Consensus 209 r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA 246 (414)
T PLN02454 209 RSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAA 246 (414)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHH
Confidence 355555566565542 22 499999999999999877
No 196
>PLN02310 triacylglycerol lipase
Probab=93.63 E-value=0.06 Score=44.66 Aligned_cols=19 Identities=26% Similarity=0.387 Sum_probs=17.3
Q ss_pred CeEEEEEEeccHHHHHHhc
Q 030535 124 SAIGAAGFCWGGVVAAKLA 142 (175)
Q Consensus 124 ~~i~v~G~S~GG~ia~~~a 142 (175)
.+|.+.|||+||.+|+..|
T Consensus 209 ~sI~vTGHSLGGALAtLaA 227 (405)
T PLN02310 209 VSLTVTGHSLGGALALLNA 227 (405)
T ss_pred ceEEEEcccHHHHHHHHHH
Confidence 4899999999999999866
No 197
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=93.19 E-value=3.4 Score=34.45 Aligned_cols=34 Identities=18% Similarity=-0.022 Sum_probs=25.3
Q ss_pred CeEEEEEEeccHHHHHHhccC-C-CccEEEEecCCC
Q 030535 124 SAIGAAGFCWGGVVAAKLASS-H-DIQAAVVLHPGA 157 (175)
Q Consensus 124 ~~i~v~G~S~GG~ia~~~a~~-~-~v~~~v~~~p~~ 157 (175)
-++..+|+|.||.++...|+- | .+++++=-++..
T Consensus 184 lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~ 219 (403)
T PF11144_consen 184 LPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYA 219 (403)
T ss_pred CcEEEEecCcHHHHHHHHHhhCccceeEEEecCccc
Confidence 389999999999999998854 4 566666444433
No 198
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=93.07 E-value=1.4 Score=36.19 Aligned_cols=37 Identities=19% Similarity=0.191 Sum_probs=28.1
Q ss_pred CCeEEEEEEeccHHHHHHhcc-----C-------CCccEEEEecCCCCC
Q 030535 123 VSAIGAAGFCWGGVVAAKLAS-----S-------HDIQAAVVLHPGAIT 159 (175)
Q Consensus 123 ~~~i~v~G~S~GG~ia~~~a~-----~-------~~v~~~v~~~p~~~~ 159 (175)
..++.|.|-|+||..+-.+|. + -.++++++.+|.+..
T Consensus 135 ~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~dp 183 (415)
T PF00450_consen 135 SNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWIDP 183 (415)
T ss_dssp TSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SBH
T ss_pred CCCEEEEccccccccchhhHHhhhhccccccccccccccceecCccccc
Confidence 348999999999999877662 1 147899999888754
No 199
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=92.59 E-value=0.29 Score=40.51 Aligned_cols=87 Identities=16% Similarity=0.187 Sum_probs=47.4
Q ss_pred CCCeEEEEecCCCCCCcchHHHHHHHHHhC--CCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHH
Q 030535 41 DSKSAILLISDVFGYEAPLFRKLADKVAGA--GFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAAL 118 (175)
Q Consensus 41 ~~~~~vv~lhg~~g~~~~~~~~~a~~la~~--G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l 118 (175)
.+.-.||+.||..+....+|..-+...... +..++.-.+. +... ...+.. .++.. .+.+.+++.+
T Consensus 78 k~~HLvVlthGi~~~~~~~~~~~~~~~~kk~p~~~iv~~g~~-~~~~-~T~~Gv----~~lG~-------Rla~~~~e~~ 144 (405)
T KOG4372|consen 78 KPKHLVVLTHGLHGADMEYWKEKIEQMTKKMPDKLIVVRGKM-NNMC-QTFDGV----DVLGE-------RLAEEVKETL 144 (405)
T ss_pred CCceEEEeccccccccHHHHHHHHHhhhcCCCcceEeeeccc-cchh-hccccc----eeeec-------ccHHHHhhhh
Confidence 455789999998884445666666666654 4433333322 2111 011110 11111 2233344444
Q ss_pred HhcCCCeEEEEEEeccHHHHHH
Q 030535 119 KSKGVSAIGAAGFCWGGVVAAK 140 (175)
Q Consensus 119 ~~~~~~~i~v~G~S~GG~ia~~ 140 (175)
....+++|..+|||.||.++..
T Consensus 145 ~~~si~kISfvghSLGGLvar~ 166 (405)
T KOG4372|consen 145 YDYSIEKISFVGHSLGGLVARY 166 (405)
T ss_pred hccccceeeeeeeecCCeeeeE
Confidence 3333679999999999988765
No 200
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=92.59 E-value=0.71 Score=35.26 Aligned_cols=96 Identities=15% Similarity=0.099 Sum_probs=60.3
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcCC--
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGV-- 123 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~-- 123 (175)
+|++-||.|.....+...++...+.|+.++..-.+...-. .+. .....-++.+++.+.+...
T Consensus 2 lvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~-~~~---------------~~~~~~~~~l~~~l~~~~~~~ 65 (240)
T PF05705_consen 2 LVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFF-WPS---------------KRLAPAADKLLELLSDSQSAS 65 (240)
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHe-eec---------------cchHHHHHHHHHHhhhhccCC
Confidence 4445579988767778888888889999998764321111 010 1111335556666665432
Q ss_pred -CeEEEEEEeccHHHHHH-hcc-----------CCCccEEEEecCCC
Q 030535 124 -SAIGAAGFCWGGVVAAK-LAS-----------SHDIQAAVVLHPGA 157 (175)
Q Consensus 124 -~~i~v~G~S~GG~ia~~-~a~-----------~~~v~~~v~~~p~~ 157 (175)
.+|.+-.||.||...+. +.. .+++++.|.-+...
T Consensus 66 ~~~il~H~FSnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~ 112 (240)
T PF05705_consen 66 PPPILFHSFSNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPG 112 (240)
T ss_pred CCCEEEEEEECchHHHHHHHHHHHHhcccccccccccceeEEeCCCC
Confidence 38999999999988886 331 13588888666443
No 201
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=92.43 E-value=0.15 Score=43.26 Aligned_cols=144 Identities=14% Similarity=0.068 Sum_probs=82.4
Q ss_pred cccccCCCCCCCCCCccceEEE--e--eCCeeEEEEccCCCC-CCeEEEEecCCC---CCCcchHHHHHHHHHhCC-CEE
Q 030535 4 SQCFENPPKLSPGSGCGAGTVQ--Q--LGGLNTYVTGSGPPD-SKSAILLISDVF---GYEAPLFRKLADKVAGAG-FLV 74 (175)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~p~~~~-~~~~vv~lhg~~---g~~~~~~~~~a~~la~~G-~~v 74 (175)
..|+++.-+.-|++-...+++- + .+.+-..++.|.++. +.-++|++-||. |.. ..-..=++.|++.+ ..|
T Consensus 91 ~~C~Q~~D~yfp~F~GsEMWNpNt~lSEDCLYlNVW~P~~~p~n~tVlVWiyGGGF~sGt~-SLdvYdGk~la~~envIv 169 (601)
T KOG4389|consen 91 NTCYQTRDTYFPGFWGSEMWNPNTELSEDCLYLNVWAPAADPYNLTVLVWIYGGGFYSGTP-SLDVYDGKFLAAVENVIV 169 (601)
T ss_pred hhhhccccccCCCCCcccccCCCCCcChhceEEEEeccCCCCCCceEEEEEEcCccccCCc-ceeeeccceeeeeccEEE
Confidence 5788888887777666665542 2 255555556553332 233566677653 221 11122356676664 677
Q ss_pred EeccCCCCCCCC--CCCCc--hhhHHHHHHhcCCCcchhHHHHHHHHHHhc------CCCeEEEEEEeccHHHHHH-h-c
Q 030535 75 VAPDFFYGDPIV--DLNNP--QFDREAWRKIHNTDKGYVDAKSVIAALKSK------GVSAIGAAGFCWGGVVAAK-L-A 142 (175)
Q Consensus 75 i~~D~~~g~~~~--~~~~~--~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~------~~~~i~v~G~S~GG~ia~~-~-a 142 (175)
+.++||-|.-.- -+..+ ..++. .-|=..+++|++++ +.++|.++|-|.|+.-+.+ + +
T Consensus 170 Vs~NYRvG~FGFL~l~~~~eaPGNmG-----------l~DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aHLls 238 (601)
T KOG4389|consen 170 VSMNYRVGAFGFLYLPGHPEAPGNMG-----------LLDQQLALQWVQENIAAFGGNPSRVTLFGESAGAASVVAHLLS 238 (601)
T ss_pred EEeeeeeccceEEecCCCCCCCCccc-----------hHHHHHHHHHHHHhHHHhCCCcceEEEeccccchhhhhheecC
Confidence 888887442000 00111 11111 14556788899887 3679999999999876654 3 3
Q ss_pred --cCCCccEEEEecCCCCC
Q 030535 143 --SSHDIQAAVVLHPGAIT 159 (175)
Q Consensus 143 --~~~~v~~~v~~~p~~~~ 159 (175)
.+..++.+|+-++++-.
T Consensus 239 P~S~glF~raIlQSGS~~~ 257 (601)
T KOG4389|consen 239 PGSRGLFHRAILQSGSLNN 257 (601)
T ss_pred CCchhhHHHHHhhcCCCCC
Confidence 22457777777777653
No 202
>PLN02571 triacylglycerol lipase
Probab=92.16 E-value=0.18 Score=41.95 Aligned_cols=18 Identities=28% Similarity=0.351 Sum_probs=16.6
Q ss_pred eEEEEEEeccHHHHHHhc
Q 030535 125 AIGAAGFCWGGVVAAKLA 142 (175)
Q Consensus 125 ~i~v~G~S~GG~ia~~~a 142 (175)
+|.+.|||+||.+|+..|
T Consensus 227 sI~VTGHSLGGALAtLaA 244 (413)
T PLN02571 227 SITICGHSLGAALATLNA 244 (413)
T ss_pred cEEEeccchHHHHHHHHH
Confidence 699999999999999866
No 203
>PLN02934 triacylglycerol lipase
Probab=91.95 E-value=0.22 Score=42.52 Aligned_cols=32 Identities=19% Similarity=0.293 Sum_probs=22.7
Q ss_pred HHHHHHHHHh-cCCCeEEEEEEeccHHHHHHhc
Q 030535 111 AKSVIAALKS-KGVSAIGAAGFCWGGVVAAKLA 142 (175)
Q Consensus 111 ~~~~~~~l~~-~~~~~i~v~G~S~GG~ia~~~a 142 (175)
+...++.+.+ .+..+|.+.|||+||.+|..+|
T Consensus 307 v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA 339 (515)
T PLN02934 307 VRSKLKSLLKEHKNAKFVVTGHSLGGALAILFP 339 (515)
T ss_pred HHHHHHHHHHHCCCCeEEEeccccHHHHHHHHH
Confidence 3334443333 3455999999999999999876
No 204
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=91.79 E-value=0.87 Score=39.71 Aligned_cols=97 Identities=18% Similarity=0.166 Sum_probs=58.3
Q ss_pred CCeEEEEecCCC----C--CCcchHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHH
Q 030535 42 SKSAILLISDVF----G--YEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVI 115 (175)
Q Consensus 42 ~~~~vv~lhg~~----g--~~~~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 115 (175)
.+..|+-+|||. . .+..+++.|++ +.|.-++..||-- .|. . .+....+++..+.
T Consensus 395 S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~---aL~cPiiSVdYSL-APE--a--------------PFPRaleEv~fAY 454 (880)
T KOG4388|consen 395 SRSLIVHCHGGGFVAQSSKSHEPYLRSWAQ---ALGCPIISVDYSL-APE--A--------------PFPRALEEVFFAY 454 (880)
T ss_pred CceEEEEecCCceeeeccccccHHHHHHHH---HhCCCeEEeeecc-CCC--C--------------CCCcHHHHHHHHH
Confidence 445677788764 1 22234444444 3488999999741 121 1 1112225566666
Q ss_pred HHHHhc----CC--CeEEEEEEeccHHHHHHhcc-----C-CCccEEEEecCCCC
Q 030535 116 AALKSK----GV--SAIGAAGFCWGGVVAAKLAS-----S-HDIQAAVVLHPGAI 158 (175)
Q Consensus 116 ~~l~~~----~~--~~i~v~G~S~GG~ia~~~a~-----~-~~v~~~v~~~p~~~ 158 (175)
-|+.++ |. .||+++|-|.||.+.+-.|. . ...+++++.|+...
T Consensus 455 cW~inn~allG~TgEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~ptl 509 (880)
T KOG4388|consen 455 CWAINNCALLGSTGERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPTL 509 (880)
T ss_pred HHHhcCHHHhCcccceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecChhh
Confidence 677765 42 59999999999987665542 2 23588887775543
No 205
>PLN02162 triacylglycerol lipase
Probab=91.73 E-value=0.22 Score=42.05 Aligned_cols=43 Identities=14% Similarity=0.196 Sum_probs=28.1
Q ss_pred hcCCCeEEEEEEeccHHHHHHhcc------C----CCccEEEEecCCCCCccc
Q 030535 120 SKGVSAIGAAGFCWGGVVAAKLAS------S----HDIQAAVVLHPGAITVDD 162 (175)
Q Consensus 120 ~~~~~~i~v~G~S~GG~ia~~~a~------~----~~v~~~v~~~p~~~~~~~ 162 (175)
+.+..++.+.|||+||.+|..+|. . .++..+..+.......+.
T Consensus 274 k~p~~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqPRVGn~~ 326 (475)
T PLN02162 274 RNKNLKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQPRVGDED 326 (475)
T ss_pred hCCCceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCCCccCHH
Confidence 334458999999999999998642 1 134456666655554443
No 206
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=91.58 E-value=6.9 Score=32.32 Aligned_cols=118 Identities=17% Similarity=0.126 Sum_probs=65.7
Q ss_pred EccCC-CCCCeEEEEecCCC-----CCCcchHHHHHHHHHhC-CCEEEecc-CC-----C-CCCCCCCCCchhhH----H
Q 030535 35 TGSGP-PDSKSAILLISDVF-----GYEAPLFRKLADKVAGA-GFLVVAPD-FF-----Y-GDPIVDLNNPQFDR----E 96 (175)
Q Consensus 35 ~~p~~-~~~~~~vv~lhg~~-----g~~~~~~~~~a~~la~~-G~~vi~~D-~~-----~-g~~~~~~~~~~~~~----~ 96 (175)
+.|.. .....++|++.||. +...+.....+..+|.. |-.|+.+. -+ + +.+. +-.++..+ .
T Consensus 55 ~vP~~~~~~~~all~i~gG~~~~~~~~~~~~~~~~~~~~A~~t~siv~~l~qvPNQpl~f~~d~~--~r~ED~iIAytW~ 132 (367)
T PF10142_consen 55 YVPKNDKNPDTALLFITGGSNRNWPGPPPDFDDELLQMIARATGSIVAILYQVPNQPLTFDNDPK--PRTEDAIIAYTWR 132 (367)
T ss_pred EECCCCCCCceEEEEEECCcccCCCCCCCcchHHHHHHHHHhcCCEEEEeCcCCCCCeEeCCCCc--cccHHHHHHHHHH
Confidence 44455 45678899999876 11123345667777765 54444433 21 1 1111 11122111 1
Q ss_pred HHHHhcCC---------CcchhHHHHHHHHHHhc---CCCeEEEEEEeccHHHHHHhc-cCCCccEEEEec
Q 030535 97 AWRKIHNT---------DKGYVDAKSVIAALKSK---GVSAIGAAGFCWGGVVAAKLA-SSHDIQAAVVLH 154 (175)
Q Consensus 97 ~~~~~~~~---------~~~~~d~~~~~~~l~~~---~~~~i~v~G~S~GG~ia~~~a-~~~~v~~~v~~~ 154 (175)
.+++.... .....-++.+-+++++. .++++.|.|.|-=|..++..| .++||++++.+-
T Consensus 133 ~fl~~~d~~w~l~~PMtka~vrAMD~vq~~~~~~~~~~i~~FvV~GaSKRGWTtWltaa~D~RV~aivP~V 203 (367)
T PF10142_consen 133 KFLETGDPEWPLHLPMTKAAVRAMDAVQEFLKKKFGVNIEKFVVTGASKRGWTTWLTAAVDPRVKAIVPIV 203 (367)
T ss_pred HHhccCCccchhhhhHHHHHHHHHHHHHHHHHhhcCCCccEEEEeCCchHhHHHHHhhccCcceeEEeeEE
Confidence 22221111 11223334455555554 578999999999999999966 578999999554
No 207
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=91.39 E-value=0.94 Score=39.59 Aligned_cols=97 Identities=12% Similarity=-0.001 Sum_probs=52.3
Q ss_pred CCeEEEEecCCC-C-CCcchHHHHHHHHHhCC--CEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHH
Q 030535 42 SKSAILLISDVF-G-YEAPLFRKLADKVAGAG--FLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAA 117 (175)
Q Consensus 42 ~~~~vv~lhg~~-g-~~~~~~~~~a~~la~~G--~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 117 (175)
..|.+|++|+.. . .....+..|-..|.-.| .-+.+||++++-.. ..+.... +....+.++
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG-------~nI~h~a---------e~~vSf~r~ 238 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGG-------ANIKHAA---------EYSVSFDRY 238 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCC-------cchHHHH---------HHHHHHhhh
Confidence 357888999765 1 11233344444555455 45667776543221 0111010 112222221
Q ss_pred HH-----hcCCCeEEEEEEeccHHHHHHhccCC---CccEEEEec
Q 030535 118 LK-----SKGVSAIGAAGFCWGGVVAAKLASSH---DIQAAVVLH 154 (175)
Q Consensus 118 l~-----~~~~~~i~v~G~S~GG~ia~~~a~~~---~v~~~v~~~ 154 (175)
.. +....+|.|+|+|||+.++...+..+ .|+++|.+.
T Consensus 239 kvlei~gefpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCig 283 (784)
T KOG3253|consen 239 KVLEITGEFPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIG 283 (784)
T ss_pred hhhhhhccCCCCceEEEecccCceeeEEeccccCCceEEEEEEec
Confidence 11 12346899999999988888876432 488888554
No 208
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=90.93 E-value=1.8 Score=36.95 Aligned_cols=123 Identities=15% Similarity=0.067 Sum_probs=63.9
Q ss_pred eeEEEEcc-CCCCCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEecc-CCCC--CCCCC-----------C---CCc
Q 030535 30 LNTYVTGS-GPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPD-FFYG--DPIVD-----------L---NNP 91 (175)
Q Consensus 30 ~~~~~~~p-~~~~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D-~~~g--~~~~~-----------~---~~~ 91 (175)
...|.+++ .++.++|.++++.||.|+.. .+- .|.+.|=..|-.+ -+.. +|.+. | ..+
T Consensus 87 ~ffy~fe~~ndp~~rPvi~wlNGGPGcSS-~~g----~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS 161 (498)
T COG2939 87 FFFYTFESPNDPANRPVIFWLNGGPGCSS-VTG----LLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFS 161 (498)
T ss_pred EEEEEecCCCCCCCCceEEEecCCCChHh-hhh----hhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcc
Confidence 44455532 22336899999999999763 222 2334454444444 1111 11100 0 000
Q ss_pred hhhHHHHHHhcCCCcchhHHHHHHHHHHh----cC--CCeEEEEEEeccHHHHHHhccC--C---CccEEEEecCCCCC
Q 030535 92 QFDREAWRKIHNTDKGYVDAKSVIAALKS----KG--VSAIGAAGFCWGGVVAAKLASS--H---DIQAAVVLHPGAIT 159 (175)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~d~~~~~~~l~~----~~--~~~i~v~G~S~GG~ia~~~a~~--~---~v~~~v~~~p~~~~ 159 (175)
.. .+-..+.++...-+|+..+.+.+.+ .. ..+..|+|-|+||..+-.+|.. . ..+..+.+.+.+..
T Consensus 162 ~a--~~~e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvlig 238 (498)
T COG2939 162 RA--LGDEKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLIG 238 (498)
T ss_pred cc--cccccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeeec
Confidence 00 0111223344444677655555443 32 3589999999999999988842 1 35555655555443
No 209
>PLN02847 triacylglycerol lipase
Probab=90.89 E-value=0.32 Score=42.33 Aligned_cols=19 Identities=37% Similarity=0.389 Sum_probs=17.2
Q ss_pred CeEEEEEEeccHHHHHHhc
Q 030535 124 SAIGAAGFCWGGVVAAKLA 142 (175)
Q Consensus 124 ~~i~v~G~S~GG~ia~~~a 142 (175)
=+|.++|||+||.+|..++
T Consensus 251 YkLVITGHSLGGGVAALLA 269 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLT 269 (633)
T ss_pred CeEEEeccChHHHHHHHHH
Confidence 3899999999999999866
No 210
>PLN02408 phospholipase A1
Probab=90.80 E-value=0.32 Score=39.93 Aligned_cols=18 Identities=22% Similarity=0.362 Sum_probs=16.7
Q ss_pred eEEEEEEeccHHHHHHhc
Q 030535 125 AIGAAGFCWGGVVAAKLA 142 (175)
Q Consensus 125 ~i~v~G~S~GG~ia~~~a 142 (175)
+|.+.|||+||.+|...|
T Consensus 201 sI~vTGHSLGGALAtLaA 218 (365)
T PLN02408 201 SLTITGHSLGAALATLTA 218 (365)
T ss_pred eEEEeccchHHHHHHHHH
Confidence 699999999999999876
No 211
>PLN02324 triacylglycerol lipase
Probab=90.34 E-value=0.35 Score=40.31 Aligned_cols=18 Identities=28% Similarity=0.366 Sum_probs=16.6
Q ss_pred eEEEEEEeccHHHHHHhc
Q 030535 125 AIGAAGFCWGGVVAAKLA 142 (175)
Q Consensus 125 ~i~v~G~S~GG~ia~~~a 142 (175)
+|.+.|||+||.+|+..|
T Consensus 216 sItvTGHSLGGALAtLaA 233 (415)
T PLN02324 216 SITFTGHSLGAVMSVLSA 233 (415)
T ss_pred eEEEecCcHHHHHHHHHH
Confidence 799999999999999866
No 212
>PLN02719 triacylglycerol lipase
Probab=90.18 E-value=0.36 Score=41.21 Aligned_cols=18 Identities=33% Similarity=0.490 Sum_probs=16.8
Q ss_pred eEEEEEEeccHHHHHHhc
Q 030535 125 AIGAAGFCWGGVVAAKLA 142 (175)
Q Consensus 125 ~i~v~G~S~GG~ia~~~a 142 (175)
+|.+.|||+||.+|...|
T Consensus 299 sItVTGHSLGGALAtLaA 316 (518)
T PLN02719 299 SITVTGHSLGGALAVLSA 316 (518)
T ss_pred eEEEecCcHHHHHHHHHH
Confidence 899999999999999866
No 213
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=90.10 E-value=2.4 Score=36.19 Aligned_cols=92 Identities=16% Similarity=0.084 Sum_probs=53.6
Q ss_pred HHhCCCEEEeccCCCCCCC----CCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhc
Q 030535 67 VAGAGFLVVAPDFFYGDPI----VDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLA 142 (175)
Q Consensus 67 la~~G~~vi~~D~~~g~~~----~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a 142 (175)
-.++||+++.=|--|.... .........+.+|.. ....+...-..++++..-.+..++-...|-|-||+-++..|
T Consensus 55 ~~~~G~A~~~TD~Gh~~~~~~~~~~~~~n~~~~~dfa~-ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~A 133 (474)
T PF07519_consen 55 ALARGYATASTDSGHQGSAGSDDASFGNNPEALLDFAY-RALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAA 133 (474)
T ss_pred hhhcCeEEEEecCCCCCCcccccccccCCHHHHHHHHh-hHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHH
Confidence 3457999999996432211 001111122222221 11111112223333333334567889999999999999999
Q ss_pred cC--CCccEEEEecCCCCC
Q 030535 143 SS--HDIQAAVVLHPGAIT 159 (175)
Q Consensus 143 ~~--~~v~~~v~~~p~~~~ 159 (175)
.+ +..+++|+.+|+.-.
T Consensus 134 QryP~dfDGIlAgaPA~~~ 152 (474)
T PF07519_consen 134 QRYPEDFDGILAGAPAINW 152 (474)
T ss_pred HhChhhcCeEEeCCchHHH
Confidence 65 479999999998753
No 214
>PLN02802 triacylglycerol lipase
Probab=89.86 E-value=0.43 Score=40.72 Aligned_cols=18 Identities=28% Similarity=0.425 Sum_probs=16.8
Q ss_pred eEEEEEEeccHHHHHHhc
Q 030535 125 AIGAAGFCWGGVVAAKLA 142 (175)
Q Consensus 125 ~i~v~G~S~GG~ia~~~a 142 (175)
+|.+.|||+||.+|...|
T Consensus 331 sI~VTGHSLGGALAtLaA 348 (509)
T PLN02802 331 SITVTGHSLGAALALLVA 348 (509)
T ss_pred eEEEeccchHHHHHHHHH
Confidence 799999999999999876
No 215
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=89.47 E-value=4 Score=34.85 Aligned_cols=105 Identities=16% Similarity=0.046 Sum_probs=55.9
Q ss_pred EEEEccCCCCCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEec-cCC-C-CCCCCCCCCchhhHHHHHHhcCCCcch
Q 030535 32 TYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAP-DFF-Y-GDPIVDLNNPQFDREAWRKIHNTDKGY 108 (175)
Q Consensus 32 ~~~~~p~~~~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~-D~~-~-g~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (175)
.|++.|.. -+.|..|.+.|......=....+++.| |--.+.+ |-| - |.-. ....+ .++-
T Consensus 279 ~yYFnPGD-~KPPL~VYFSGyR~aEGFEgy~MMk~L---g~PfLL~~DpRleGGaFY--lGs~e--yE~~---------- 340 (511)
T TIGR03712 279 IYYFNPGD-FKPPLNVYFSGYRPAEGFEGYFMMKRL---GAPFLLIGDPRLEGGAFY--LGSDE--YEQG---------- 340 (511)
T ss_pred EEecCCcC-CCCCeEEeeccCcccCcchhHHHHHhc---CCCeEEeeccccccceee--eCcHH--HHHH----------
Confidence 45563332 255788889977654321223455555 3333332 444 2 2222 11111 1111
Q ss_pred hHHHHHHHHHHhcC--CCeEEEEEEeccHHHHHHhccCCCccEEEEecC
Q 030535 109 VDAKSVIAALKSKG--VSAIGAAGFCWGGVVAAKLASSHDIQAAVVLHP 155 (175)
Q Consensus 109 ~d~~~~~~~l~~~~--~~~i~v~G~S~GG~ia~~~a~~~~v~~~v~~~p 155 (175)
-++.+-+.|+..+ .+.+.+-|.|||..-|+.++..-...|+|+.=|
T Consensus 341 -I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~P~AIiVgKP 388 (511)
T TIGR03712 341 -IINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLSPHAIIVGKP 388 (511)
T ss_pred -HHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCCCceEEEcCc
Confidence 1223333444444 358999999999999999997655666665444
No 216
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=89.23 E-value=1.1 Score=30.53 Aligned_cols=35 Identities=14% Similarity=0.152 Sum_probs=18.9
Q ss_pred EeeCCeeEEEEccC-CCCCCeEEEEecCCCCCCcch
Q 030535 25 QQLGGLNTYVTGSG-PPDSKSAILLISDVFGYEAPL 59 (175)
Q Consensus 25 ~~~~~~~~~~~~p~-~~~~~~~vv~lhg~~g~~~~~ 59 (175)
.+++++++++..-. ......++|++|||.|+..+.
T Consensus 73 t~I~g~~iHFih~rs~~~~aiPLll~HGWPgSf~Ef 108 (112)
T PF06441_consen 73 TEIDGLDIHFIHVRSKRPNAIPLLLLHGWPGSFLEF 108 (112)
T ss_dssp EEETTEEEEEEEE--S-TT-EEEEEE--SS--GGGG
T ss_pred EEEeeEEEEEEEeeCCCCCCeEEEEECCCCccHHhH
Confidence 57789987654222 233557799999998876543
No 217
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=89.11 E-value=0.95 Score=34.42 Aligned_cols=45 Identities=18% Similarity=0.244 Sum_probs=35.5
Q ss_pred CCCeEEEEEEeccHHHHHHhccCCCccEEEEecCCCCCccccccc
Q 030535 122 GVSAIGAAGFCWGGVVAAKLASSHDIQAAVVLHPGAITVDDINGK 166 (175)
Q Consensus 122 ~~~~i~v~G~S~GG~ia~~~a~~~~v~~~v~~~p~~~~~~~~~~~ 166 (175)
..++|.|+++|||=.+|.++-...+++..++++|.+.+.++...+
T Consensus 55 ~y~~i~lvAWSmGVw~A~~~l~~~~~~~aiAINGT~~Pid~~~GI 99 (213)
T PF04301_consen 55 GYREIYLVAWSMGVWAANRVLQGIPFKRAIAINGTPYPIDDEYGI 99 (213)
T ss_pred cCceEEEEEEeHHHHHHHHHhccCCcceeEEEECCCCCcCCCCCC
Confidence 356999999999999988865555688899999998876654443
No 218
>PLN02753 triacylglycerol lipase
Probab=89.05 E-value=0.5 Score=40.50 Aligned_cols=19 Identities=32% Similarity=0.412 Sum_probs=17.4
Q ss_pred CeEEEEEEeccHHHHHHhc
Q 030535 124 SAIGAAGFCWGGVVAAKLA 142 (175)
Q Consensus 124 ~~i~v~G~S~GG~ia~~~a 142 (175)
-+|.+.|||+||.+|...|
T Consensus 312 ~sItVTGHSLGGALAtLaA 330 (531)
T PLN02753 312 LSITVTGHSLGGALAILSA 330 (531)
T ss_pred ceEEEEccCHHHHHHHHHH
Confidence 4899999999999999876
No 219
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=88.46 E-value=1.6 Score=34.93 Aligned_cols=39 Identities=23% Similarity=0.320 Sum_probs=29.5
Q ss_pred cchhHHHHHHHHHHhcCC-CeEEEEEEeccHHHHHHhccC
Q 030535 106 KGYVDAKSVIAALKSKGV-SAIGAAGFCWGGVVAAKLASS 144 (175)
Q Consensus 106 ~~~~d~~~~~~~l~~~~~-~~i~v~G~S~GG~ia~~~a~~ 144 (175)
....++.+++..+++..+ .+|-+-|||.||.+|..+...
T Consensus 257 ryySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~ 296 (425)
T COG5153 257 RYYSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIR 296 (425)
T ss_pred chhHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccc
Confidence 344666667777776644 599999999999999987754
No 220
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=88.46 E-value=1.6 Score=34.93 Aligned_cols=39 Identities=23% Similarity=0.320 Sum_probs=29.5
Q ss_pred cchhHHHHHHHHHHhcCC-CeEEEEEEeccHHHHHHhccC
Q 030535 106 KGYVDAKSVIAALKSKGV-SAIGAAGFCWGGVVAAKLASS 144 (175)
Q Consensus 106 ~~~~d~~~~~~~l~~~~~-~~i~v~G~S~GG~ia~~~a~~ 144 (175)
....++.+++..+++..+ .+|-+-|||.||.+|..+...
T Consensus 257 ryySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~ 296 (425)
T KOG4540|consen 257 RYYSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIR 296 (425)
T ss_pred chhHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccc
Confidence 344666667777776644 599999999999999987754
No 221
>PLN02761 lipase class 3 family protein
Probab=88.15 E-value=0.41 Score=40.99 Aligned_cols=18 Identities=28% Similarity=0.340 Sum_probs=16.7
Q ss_pred eEEEEEEeccHHHHHHhc
Q 030535 125 AIGAAGFCWGGVVAAKLA 142 (175)
Q Consensus 125 ~i~v~G~S~GG~ia~~~a 142 (175)
+|.+.|||+||.+|...|
T Consensus 295 sItVTGHSLGGALAtLaA 312 (527)
T PLN02761 295 SITVTGHSLGASLALVSA 312 (527)
T ss_pred eEEEeccchHHHHHHHHH
Confidence 799999999999999866
No 222
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=87.97 E-value=9.2 Score=28.47 Aligned_cols=38 Identities=21% Similarity=0.351 Sum_probs=29.4
Q ss_pred CCCeEEEEecCCCCCCc-chHHHHHHHHHhCCCEEEecc
Q 030535 41 DSKSAILLISDVFGYEA-PLFRKLADKVAGAGFLVVAPD 78 (175)
Q Consensus 41 ~~~~~vv~lhg~~g~~~-~~~~~~a~~la~~G~~vi~~D 78 (175)
..++.+|++.|..|.-. .--..+.+.|.++|++++.+|
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LD 58 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLD 58 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEec
Confidence 35578999998776432 334668888999999999999
No 223
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=86.86 E-value=0.84 Score=37.11 Aligned_cols=33 Identities=21% Similarity=0.179 Sum_probs=23.8
Q ss_pred HHHHHHHHHHhcC-CCeEEEEEEeccHHHHHHhc
Q 030535 110 DAKSVIAALKSKG-VSAIGAAGFCWGGVVAAKLA 142 (175)
Q Consensus 110 d~~~~~~~l~~~~-~~~i~v~G~S~GG~ia~~~a 142 (175)
.+.+.++.|.+.. .-+|.+-|||+||.+|...|
T Consensus 156 ~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa 189 (336)
T KOG4569|consen 156 GLDAELRRLIELYPNYSIWVTGHSLGGALASLAA 189 (336)
T ss_pred HHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHH
Confidence 3444555554443 33899999999999999876
No 224
>cd03413 CbiK_C Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), C-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases, and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=86.61 E-value=7.4 Score=25.91 Aligned_cols=27 Identities=4% Similarity=0.009 Sum_probs=17.9
Q ss_pred EEEEecCCCCCCcchHHHHHHHHHhCC
Q 030535 45 AILLISDVFGYEAPLFRKLADKVAGAG 71 (175)
Q Consensus 45 ~vv~lhg~~g~~~~~~~~~a~~la~~G 71 (175)
.|++-||........+..+++.+.+++
T Consensus 3 illvgHGSr~~~~~~~~~l~~~l~~~~ 29 (103)
T cd03413 3 VVFMGHGTDHPSNAVYAALEYVLREED 29 (103)
T ss_pred EEEEECCCCchhhhHHHHHHHHHHhcC
Confidence 455567665543467888888887664
No 225
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=86.57 E-value=1.1 Score=35.49 Aligned_cols=79 Identities=11% Similarity=0.163 Sum_probs=46.5
Q ss_pred HHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHH---hcCCCcchhHHHHHHHHHHhcCCCeEEEEEEeccHHH
Q 030535 62 KLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRK---IHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVV 137 (175)
Q Consensus 62 ~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~~~~~~l~~~~~~~i~v~G~S~GG~i 137 (175)
.+..-+..+++..+.+.-+ +|+.. +...-.+...+.. .+. ...+++....+.|=.+.|..++++.|.||||.+
T Consensus 132 ~L~~p~~k~~i~tmvle~pfYgqr~--p~~q~~~~Le~vtDlf~mG-~A~I~E~~~lf~Ws~~~g~g~~~~~g~Smgg~~ 208 (371)
T KOG1551|consen 132 VLSKPINKREIATMVLEKPFYGQRV--PEEQIIHMLEYVTDLFKMG-RATIQEFVKLFTWSSADGLGNLNLVGRSMGGDI 208 (371)
T ss_pred eecCchhhhcchheeeecccccccC--CHHHHHHHHHHHHHHHHhh-HHHHHHHHHhcccccccCcccceeeeeecccHH
Confidence 3566677788988888877 78755 2211111111110 000 112233334444433347789999999999999
Q ss_pred HHHhcc
Q 030535 138 AAKLAS 143 (175)
Q Consensus 138 a~~~a~ 143 (175)
+.....
T Consensus 209 a~~vgS 214 (371)
T KOG1551|consen 209 ANQVGS 214 (371)
T ss_pred HHhhcc
Confidence 999774
No 226
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=85.30 E-value=1.6 Score=34.48 Aligned_cols=37 Identities=19% Similarity=0.117 Sum_probs=28.6
Q ss_pred chhHHHHHHHHHHhc--CCCeEEEEEEeccHHHHHHhcc
Q 030535 107 GYVDAKSVIAALKSK--GVSAIGAAGFCWGGVVAAKLAS 143 (175)
Q Consensus 107 ~~~d~~~~~~~l~~~--~~~~i~v~G~S~GG~ia~~~a~ 143 (175)
..+.+..+..++.++ ..++|.++|||.|+.+|..+|.
T Consensus 73 ~~~~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~ 111 (277)
T PF09994_consen 73 IEARIRDAYRFLSKNYEPGDRIYLFGFSRGAYTARAFAN 111 (277)
T ss_pred hHHHHHHHHHHHHhccCCcceEEEEecCccHHHHHHHHH
Confidence 346677777777554 3568999999999999998773
No 227
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=83.81 E-value=11 Score=28.96 Aligned_cols=75 Identities=16% Similarity=0.167 Sum_probs=43.2
Q ss_pred CCeEEEEecCCCCCCcchHHHHHHHHHhCCC-EEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHh
Q 030535 42 SKSAILLISDVFGYEAPLFRKLADKVAGAGF-LVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKS 120 (175)
Q Consensus 42 ~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~-~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~ 120 (175)
....|++.||..-.....+.-+-..|-++|| .|+.-.. -|- .+++.++++|++
T Consensus 137 ~e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~v-e~y-------------------------P~~d~vi~~l~~ 190 (265)
T COG4822 137 DEILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAV-EGY-------------------------PLVDTVIEYLRK 190 (265)
T ss_pred CeEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEe-cCC-------------------------CcHHHHHHHHHH
Confidence 4456666674443333445545556677788 5555442 111 457888889988
Q ss_pred cCCCeEEEEEEe--ccHHHHHHhc
Q 030535 121 KGVSAIGAAGFC--WGGVVAAKLA 142 (175)
Q Consensus 121 ~~~~~i~v~G~S--~GG~ia~~~a 142 (175)
++..++.++=+= .|-...-.||
T Consensus 191 ~~~~~v~L~PlMlvAG~Ha~nDMa 214 (265)
T COG4822 191 NGIKEVHLIPLMLVAGDHAKNDMA 214 (265)
T ss_pred cCCceEEEeeeEEeechhhhhhhc
Confidence 887766655443 3444444566
No 228
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=81.02 E-value=2.3 Score=32.41 Aligned_cols=35 Identities=26% Similarity=0.344 Sum_probs=28.1
Q ss_pred eEEEEecCCCCCCcchHHHHHHHHHhCCCEEEecc
Q 030535 44 SAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPD 78 (175)
Q Consensus 44 ~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D 78 (175)
..||++|.....+.+.+..+.+.|.++||.+++++
T Consensus 187 g~IiLlHd~~~~t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 187 GAILLLHAVSKDNAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEhH
Confidence 45999997654445678889999999999999875
No 229
>COG1856 Uncharacterized homolog of biotin synthetase [Function unknown]
Probab=81.00 E-value=22 Score=27.54 Aligned_cols=91 Identities=18% Similarity=0.124 Sum_probs=57.2
Q ss_pred eEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcCC
Q 030535 44 SAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGV 123 (175)
Q Consensus 44 ~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~ 123 (175)
...+-.|-|+-- +..+++|+..+..|+..|+.+.+.. +.+. ...+..++|-...+.+|++.++
T Consensus 88 ~l~inaHvGfvd-----E~~~eklk~~~vdvvsLDfvgDn~v---------Ik~v---y~l~ksv~dyl~~l~~L~e~~i 150 (275)
T COG1856 88 GLLINAHVGFVD-----ESDLEKLKEELVDVVSLDFVGDNDV---------IKRV---YKLPKSVEDYLRSLLLLKENGI 150 (275)
T ss_pred CeEEEEEeeecc-----HHHHHHHHHhcCcEEEEeecCChHH---------HHHH---HcCCccHHHHHHHHHHHHHcCc
Confidence 355666755442 3457788888899999997433221 2222 3335566888999999998865
Q ss_pred C--eEEEEEEeccHHH----HHHhccCCCccEEE
Q 030535 124 S--AIGAAGFCWGGVV----AAKLASSHDIQAAV 151 (175)
Q Consensus 124 ~--~i~v~G~S~GG~i----a~~~a~~~~v~~~v 151 (175)
. +-..+|.++|+.- |+.+-.+-.++++|
T Consensus 151 rvvpHitiGL~~gki~~e~kaIdiL~~~~~DalV 184 (275)
T COG1856 151 RVVPHITIGLDFGKIHGEFKAIDILVNYEPDALV 184 (275)
T ss_pred eeceeEEEEeccCcccchHHHHHHHhcCCCCeEE
Confidence 3 6678999988754 33333333444444
No 230
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=80.73 E-value=1.1 Score=31.30 Aligned_cols=40 Identities=18% Similarity=0.264 Sum_probs=25.7
Q ss_pred eeEEEEccCCCCCCeEEEEecCCCCCCcch-HHHHHHHHHhCC
Q 030535 30 LNTYVTGSGPPDSKSAILLISDVFGYEAPL-FRKLADKVAGAG 71 (175)
Q Consensus 30 ~~~~~~~p~~~~~~~~vv~lhg~~g~~~~~-~~~~a~~la~~G 71 (175)
+..++. .+...+|.|+-+||+.|.-.+. -+.+|+.|-..|
T Consensus 41 i~~~l~--~~~p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G 81 (127)
T PF06309_consen 41 IKGHLA--NPNPRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSG 81 (127)
T ss_pred HHHHHc--CCCCCCCEEEEeecCCCCcHHHHHHHHHHHHHhcc
Confidence 455666 3445678899999988854322 344666666666
No 231
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=80.62 E-value=2.4 Score=35.79 Aligned_cols=35 Identities=14% Similarity=0.310 Sum_probs=26.6
Q ss_pred CCeEEEEEEeccHHHHHHhcc-----C-----C--CccEEEEecCCC
Q 030535 123 VSAIGAAGFCWGGVVAAKLAS-----S-----H--DIQAAVVLHPGA 157 (175)
Q Consensus 123 ~~~i~v~G~S~GG~ia~~~a~-----~-----~--~v~~~v~~~p~~ 157 (175)
..++.|.|.|+||..+-.+|. + + .++++++.+|..
T Consensus 164 ~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t 210 (433)
T PLN03016 164 SNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVT 210 (433)
T ss_pred CCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCc
Confidence 357999999999997777652 1 1 578888888864
No 232
>cd03409 Chelatase_Class_II Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings. This family includes protoporphyrin IX ferrochelatase (HemH), sirohydrochlorin ferrochelatase (SirB) and the cobaltochelatases, CbiK and CbiX. HemH and SirB are involved in heme and siroheme biosynthesis, respectively, while the cobaltochelatases are associated with cobalamin biosynthesis. Excluded from this family are the ATP-dependent heterotrimeric chelatases (class I) and the multifunctional homodimeric enzymes with dehydrogenase and chelatase activities (class III).
Probab=79.34 E-value=12 Score=24.04 Aligned_cols=21 Identities=19% Similarity=0.281 Sum_probs=14.6
Q ss_pred hHHHHHHHHHHhcCCCeEEEE
Q 030535 109 VDAKSVIAALKSKGVSAIGAA 129 (175)
Q Consensus 109 ~d~~~~~~~l~~~~~~~i~v~ 129 (175)
.++..+++.+.+.|.++|.++
T Consensus 45 P~i~~~l~~l~~~g~~~vvvv 65 (101)
T cd03409 45 PDTEEAIRELAEEGYQRVVIV 65 (101)
T ss_pred CCHHHHHHHHHHcCCCeEEEE
Confidence 346677778877777776664
No 233
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=78.90 E-value=22 Score=25.67 Aligned_cols=37 Identities=22% Similarity=0.264 Sum_probs=26.2
Q ss_pred CeEEEEecCCCCCCc-chHHHHHHHHHhCCCEEEeccC
Q 030535 43 KSAILLISDVFGYEA-PLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 43 ~~~vv~lhg~~g~~~-~~~~~~a~~la~~G~~vi~~D~ 79 (175)
++.||++.|..|.-. ..-..+.+.|.++|+.++.+|-
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDg 38 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDG 38 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecC
Confidence 367999998776542 3345677888889999999993
No 234
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=78.31 E-value=9.3 Score=32.11 Aligned_cols=103 Identities=14% Similarity=0.182 Sum_probs=63.3
Q ss_pred CCeEEEEecCCCCCC-cchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHH
Q 030535 42 SKSAILLISDVFGYE-APLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALK 119 (175)
Q Consensus 42 ~~~~vv~lhg~~g~~-~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 119 (175)
..|.|+.-. |++.. .....+..+.|.. +=+...++ ++.+. |.-. +|- ..++.+..+|...+++.++
T Consensus 62 drPtV~~T~-GY~~~~~p~r~Ept~Lld~---NQl~vEhRfF~~Sr--P~p~-----DW~-~Lti~QAA~D~Hri~~A~K 129 (448)
T PF05576_consen 62 DRPTVLYTE-GYNVSTSPRRSEPTQLLDG---NQLSVEHRFFGPSR--PEPA-----DWS-YLTIWQAASDQHRIVQAFK 129 (448)
T ss_pred CCCeEEEec-CcccccCccccchhHhhcc---ceEEEEEeeccCCC--CCCC-----Ccc-cccHhHhhHHHHHHHHHHH
Confidence 445555444 55532 2233355555543 34555566 66655 2211 121 1344455599999999999
Q ss_pred hcCCCeEEEEEEeccHHHHHHhccC--CCccEEEEecCC
Q 030535 120 SKGVSAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPG 156 (175)
Q Consensus 120 ~~~~~~i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~ 156 (175)
.....+=.--|.|-||++++.+=.. .+|++.|.+-..
T Consensus 130 ~iY~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP 168 (448)
T PF05576_consen 130 PIYPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAP 168 (448)
T ss_pred hhccCCceecCcCCCceeEEEEeeeCCCCCCeeeeeecc
Confidence 8877788889999999999876543 478888865433
No 235
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=77.39 E-value=9.7 Score=36.55 Aligned_cols=95 Identities=18% Similarity=0.311 Sum_probs=55.1
Q ss_pred CCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCCCCC-CCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHH
Q 030535 41 DSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGD-PIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALK 119 (175)
Q Consensus 41 ~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 119 (175)
...|++.|+|..-|.. ..++.+|..|. + |. +|- .. +. -...+++ +-+.-.++.++
T Consensus 2121 se~~~~Ffv~pIEG~t-t~l~~la~rle---~----Pa--YglQ~T-~~-vP~dSie------------s~A~~yirqir 2176 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFT-TALESLASRLE---I----PA--YGLQCT-EA-VPLDSIE------------SLAAYYIRQIR 2176 (2376)
T ss_pred ccCCceEEEeccccch-HHHHHHHhhcC---C----cc--hhhhcc-cc-CCcchHH------------HHHHHHHHHHH
Confidence 3568899999777765 34555555542 1 22 221 11 00 0111221 11223344555
Q ss_pred hc-CCCeEEEEEEeccHHHHHHhcc----CCCccEEEEecCCCCC
Q 030535 120 SK-GVSAIGAAGFCWGGVVAAKLAS----SHDIQAAVVLHPGAIT 159 (175)
Q Consensus 120 ~~-~~~~i~v~G~S~GG~ia~~~a~----~~~v~~~v~~~p~~~~ 159 (175)
+. ...+--++|+|+|..++..+|. ......+|++.++..+
T Consensus 2177 kvQP~GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGspty 2221 (2376)
T KOG1202|consen 2177 KVQPEGPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGSPTY 2221 (2376)
T ss_pred hcCCCCCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCchHH
Confidence 43 3457899999999999999883 2346668888888764
No 236
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=77.14 E-value=5.9 Score=33.69 Aligned_cols=53 Identities=9% Similarity=-0.024 Sum_probs=37.5
Q ss_pred hHHHHHHHHHHhc---CCCeEEEEEEeccHHHHHHhcc-----C-----C--CccEEEEecCCCCCcc
Q 030535 109 VDAKSVIAALKSK---GVSAIGAAGFCWGGVVAAKLAS-----S-----H--DIQAAVVLHPGAITVD 161 (175)
Q Consensus 109 ~d~~~~~~~l~~~---~~~~i~v~G~S~GG~ia~~~a~-----~-----~--~v~~~v~~~p~~~~~~ 161 (175)
+-.....+|+.+. ..+.+.|.|-|++|..+=.+|. + + .++++++-+|......
T Consensus 150 d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~~ 217 (454)
T KOG1282|consen 150 DNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLTDPEI 217 (454)
T ss_pred HHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCcccCccc
Confidence 3345667777654 2458999999999987776662 1 1 4799999888876543
No 237
>PLN02209 serine carboxypeptidase
Probab=77.09 E-value=19 Score=30.42 Aligned_cols=35 Identities=17% Similarity=0.283 Sum_probs=26.0
Q ss_pred CeEEEEEEeccHHHHHHhcc-----C-----C--CccEEEEecCCCC
Q 030535 124 SAIGAAGFCWGGVVAAKLAS-----S-----H--DIQAAVVLHPGAI 158 (175)
Q Consensus 124 ~~i~v~G~S~GG~ia~~~a~-----~-----~--~v~~~v~~~p~~~ 158 (175)
.++.|+|.|+||..+-.+|. + + .++++++.+|...
T Consensus 167 ~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td 213 (437)
T PLN02209 167 NPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITH 213 (437)
T ss_pred CCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccC
Confidence 48999999999987776652 1 1 4678888887643
No 238
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=75.92 E-value=4.4 Score=31.03 Aligned_cols=20 Identities=25% Similarity=0.383 Sum_probs=17.3
Q ss_pred CCeEEEEEEeccHHHHHHhc
Q 030535 123 VSAIGAAGFCWGGVVAAKLA 142 (175)
Q Consensus 123 ~~~i~v~G~S~GG~ia~~~a 142 (175)
.+++.|+|+|+|+.++...+
T Consensus 47 ~~~vvV~GySQGA~Va~~~~ 66 (225)
T PF08237_consen 47 GGPVVVFGYSQGAVVASNVL 66 (225)
T ss_pred CCCEEEEEECHHHHHHHHHH
Confidence 46899999999999998744
No 239
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=75.12 E-value=4.8 Score=32.93 Aligned_cols=34 Identities=15% Similarity=0.182 Sum_probs=24.5
Q ss_pred CCCeEEEEEEeccHHHHHHhc----cC---CCccEEEEecC
Q 030535 122 GVSAIGAAGFCWGGVVAAKLA----SS---HDIQAAVVLHP 155 (175)
Q Consensus 122 ~~~~i~v~G~S~GG~ia~~~a----~~---~~v~~~v~~~p 155 (175)
+..+|.++|||+|+.+..... .. ..|+-++++..
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Ga 258 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGA 258 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecC
Confidence 455799999999999998733 22 24677776653
No 240
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=74.72 E-value=3.3 Score=30.42 Aligned_cols=34 Identities=15% Similarity=0.205 Sum_probs=25.4
Q ss_pred EEEEecCCC--CCCcchHHHHHHHHHhCCCEEEecc
Q 030535 45 AILLISDVF--GYEAPLFRKLADKVAGAGFLVVAPD 78 (175)
Q Consensus 45 ~vv~lhg~~--g~~~~~~~~~a~~la~~G~~vi~~D 78 (175)
.||++|.+. ....+.+..+.+.|.++||.+++++
T Consensus 153 ~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 153 DIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 499999532 2233567889999999999998875
No 241
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=72.00 E-value=7.5 Score=31.68 Aligned_cols=100 Identities=16% Similarity=0.028 Sum_probs=53.1
Q ss_pred CCeEEEEecCCC---CCC-cchHHHHHHHHHh-CCCEEEeccCCCCCCCCCCC---CchhhHHHHHHhcCC-CcchhHHH
Q 030535 42 SKSAILLISDVF---GYE-APLFRKLADKVAG-AGFLVVAPDFFYGDPIVDLN---NPQFDREAWRKIHNT-DKGYVDAK 112 (175)
Q Consensus 42 ~~~~vv~lhg~~---g~~-~~~~~~~a~~la~-~G~~vi~~D~~~g~~~~~~~---~~~~~~~~~~~~~~~-~~~~~d~~ 112 (175)
.+..|+++-|-+ |.. ..+...+...|.. .+..++++.-. |-...... +..+.+........+ .-+...+.
T Consensus 30 ~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~-GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~ 108 (423)
T COG3673 30 MKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDE-GVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIR 108 (423)
T ss_pred cceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecC-CcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHH
Confidence 445666666433 222 1345666776755 46777664433 32110111 111111111100011 12336678
Q ss_pred HHHHHHHhc--CCCeEEEEEEeccHHHHHHhc
Q 030535 113 SVIAALKSK--GVSAIGAAGFCWGGVVAAKLA 142 (175)
Q Consensus 113 ~~~~~l~~~--~~~~i~v~G~S~GG~ia~~~a 142 (175)
.+..+|-++ .-++|.++|||-|+.++.-+|
T Consensus 109 ~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVla 140 (423)
T COG3673 109 EAYRFLIFNYEPGDEIYAFGFSRGAFSARVLA 140 (423)
T ss_pred HHHHHHHHhcCCCCeEEEeeccchhHHHHHHH
Confidence 888888776 346999999999999988655
No 242
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=71.57 E-value=5.1 Score=35.13 Aligned_cols=31 Identities=29% Similarity=0.454 Sum_probs=21.4
Q ss_pred HHHHHHHHhc--C-CCeEEEEEEeccHHHHHHhc
Q 030535 112 KSVIAALKSK--G-VSAIGAAGFCWGGVVAAKLA 142 (175)
Q Consensus 112 ~~~~~~l~~~--~-~~~i~v~G~S~GG~ia~~~a 142 (175)
+..++.+... | ..+|..+||||||.++-.+.
T Consensus 511 ~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lL 544 (697)
T KOG2029|consen 511 NELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLL 544 (697)
T ss_pred HHHHHHHHHhccCCCCceEEEecccchHHHHHHH
Confidence 3455555544 3 34799999999998887643
No 243
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=70.98 E-value=27 Score=28.71 Aligned_cols=85 Identities=15% Similarity=0.032 Sum_probs=50.2
Q ss_pred CCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcchhHH-HHHHHHHH
Q 030535 42 SKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDA-KSVIAALK 119 (175)
Q Consensus 42 ~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~l~ 119 (175)
..++||++-||.|.....+...+..+.++||.++.+-.+ .-... ......-+. .++ +.....+.
T Consensus 37 s~k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~-~~s~~~~sl-------------~~~~~~l~~L~~ 102 (350)
T KOG2521|consen 37 SEKPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFL-SASRRILSL-------------SLASTRLSELLS 102 (350)
T ss_pred ccccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCccccccc-ccccccchh-------------hHHHHHHHHHhh
Confidence 333455555688877667777888888899999998876 32222 111111111 223 22333333
Q ss_pred hc--CCCeEEEEEEeccHHHHHH
Q 030535 120 SK--GVSAIGAAGFCWGGVVAAK 140 (175)
Q Consensus 120 ~~--~~~~i~v~G~S~GG~ia~~ 140 (175)
.. +..++..-=||+||...+.
T Consensus 103 ~~~~~~~pi~fh~FS~ng~~~~~ 125 (350)
T KOG2521|consen 103 DYNSDPCPIIFHVFSGNGVRLMY 125 (350)
T ss_pred hccCCcCceEEEEecCCceeehH
Confidence 32 3457888899999987765
No 244
>PRK00923 sirohydrochlorin cobaltochelatase; Reviewed
Probab=70.37 E-value=31 Score=23.44 Aligned_cols=20 Identities=15% Similarity=0.139 Sum_probs=13.7
Q ss_pred HHHHHHHHHhcCCCeEEEEE
Q 030535 111 AKSVIAALKSKGVSAIGAAG 130 (175)
Q Consensus 111 ~~~~~~~l~~~~~~~i~v~G 130 (175)
+..+++.+.+.|.++|.++=
T Consensus 48 l~~~l~~l~~~g~~~v~vvP 67 (126)
T PRK00923 48 IPEALKKLIGTGADKIIVVP 67 (126)
T ss_pred HHHHHHHHHHcCCCEEEEEc
Confidence 66667777777777777653
No 245
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=68.44 E-value=37 Score=25.67 Aligned_cols=38 Identities=18% Similarity=0.143 Sum_probs=29.0
Q ss_pred CCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 41 DSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 41 ~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
.+.|.+++.|+..+... .....+..++.+++.++..+.
T Consensus 47 ~~~p~v~~~h~~~~~~~-~~~~~~~~l~~~~~~~~~~~~ 84 (299)
T COG1073 47 KKLPAVVFLHGFGSSKE-QSLGYAVLLAEKGYRVLAGDA 84 (299)
T ss_pred ccCceEEeccCcccccc-CcchHHHHhhhceeEEeeecc
Confidence 35788999997766553 333488999999999998875
No 246
>TIGR01378 thi_PPkinase thiamine pyrophosphokinase. This model has been revised. Originally, it described strictly eukaryotic thiamine pyrophosphokinase. However, it is now expanded to include also homologous enzymes, apparently functionally equivalent, from species that rely on thiamine pyrophosphokinase rather than thiamine-monophosphate kinase (TIGR01379) to produce the active TPP cofactor. This includes the thiamine pyrophosphokinase from Bacillus subtilis, previously designated YloS.
Probab=68.18 E-value=14 Score=27.71 Aligned_cols=35 Identities=20% Similarity=0.263 Sum_probs=28.3
Q ss_pred CCCcchhHHHHHHHHHHhcCCCeEEEEEEeccHHHH
Q 030535 103 NTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVA 138 (175)
Q Consensus 103 ~~~~~~~d~~~~~~~l~~~~~~~i~v~G~S~GG~ia 138 (175)
..++-..|.+.+++++.+++.++|.++|- +||++=
T Consensus 67 ~~eKD~TD~e~Al~~~~~~~~~~i~i~Ga-~GgR~D 101 (203)
T TIGR01378 67 PPEKDTTDLELALKYALERGADEITILGA-TGGRLD 101 (203)
T ss_pred CCCCCCCHHHHHHHHHHHCCCCEEEEEcC-CCCcHH
Confidence 44566689999999999888889999997 487754
No 247
>PTZ00445 p36-lilke protein; Provisional
Probab=67.97 E-value=36 Score=26.01 Aligned_cols=94 Identities=19% Similarity=0.141 Sum_probs=56.9
Q ss_pred chHHHHHHHHHhCCCEEEeccCC-C-----CCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcCCCeEEEEEE
Q 030535 58 PLFRKLADKVAGAGFLVVAPDFF-Y-----GDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVSAIGAAGF 131 (175)
Q Consensus 58 ~~~~~~a~~la~~G~~vi~~D~~-~-----g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~v~G~ 131 (175)
+....+.+.|.+.|+.+++.|+- . -.++-.+.. +..... .-...++..++..+++.++ +|.|+-|
T Consensus 29 ~~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~---~~~~~~-----~~~tpefk~~~~~l~~~~I-~v~VVTf 99 (219)
T PTZ00445 29 ESADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDN---DDIRVL-----TSVTPDFKILGKRLKNSNI-KISVVTF 99 (219)
T ss_pred HHHHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCc---chhhhh-----ccCCHHHHHHHHHHHHCCC-eEEEEEc
Confidence 45678899999999999999973 1 011101110 111111 1123678888888877654 8999999
Q ss_pred ecc--------------HHHHHHhcc----CCCccEEEEecCCCCCc
Q 030535 132 CWG--------------GVVAAKLAS----SHDIQAAVVLHPGAITV 160 (175)
Q Consensus 132 S~G--------------G~ia~~~a~----~~~v~~~v~~~p~~~~~ 160 (175)
|-= +.++-..-. +-.++.+..++|.....
T Consensus 100 Sd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~ 146 (219)
T PTZ00445 100 SDKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQE 146 (219)
T ss_pred cchhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCC
Confidence 853 223333222 23688888899986654
No 248
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=67.43 E-value=11 Score=22.80 Aligned_cols=35 Identities=14% Similarity=0.110 Sum_probs=14.9
Q ss_pred eEEEeeCCeeEEEEc-cCC------CCCCeEEEEecCCCCCC
Q 030535 22 GTVQQLGGLNTYVTG-SGP------PDSKSAILLISDVFGYE 56 (175)
Q Consensus 22 ~~~~~~~~~~~~~~~-p~~------~~~~~~vv~lhg~~g~~ 56 (175)
-...+.+|.-.-+++ |.+ ..++|+|++.||..++.
T Consensus 15 h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss 56 (63)
T PF04083_consen 15 HEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSS 56 (63)
T ss_dssp EEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--G
T ss_pred EEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccCh
Confidence 444566775544432 121 23578888899777654
No 249
>PLN02757 sirohydrochlorine ferrochelatase
Probab=67.24 E-value=35 Score=24.43 Aligned_cols=32 Identities=9% Similarity=0.133 Sum_probs=17.8
Q ss_pred eEEEEecCCCCCC-cchHHHHHHHHHhC-CCEEE
Q 030535 44 SAILLISDVFGYE-APLFRKLADKVAGA-GFLVV 75 (175)
Q Consensus 44 ~~vv~lhg~~g~~-~~~~~~~a~~la~~-G~~vi 75 (175)
..||+-||..... ...+..+++.+.++ ++..+
T Consensus 15 ~lllvgHGSrd~~a~~~~~~la~~l~~~~~~~~V 48 (154)
T PLN02757 15 GVVIVDHGSRRKESNLMLEEFVAMYKQKTGHPIV 48 (154)
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHHhhCCCCcE
Confidence 4555566444322 24567788888654 45443
No 250
>cd03416 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both are found in a wide range of bacteria. This subgroup also contains single domain proteins from archaea and bacteria which may represent the ancestral form of class II chelatases before domain duplication occurred.
Probab=66.43 E-value=31 Score=22.28 Aligned_cols=26 Identities=15% Similarity=0.129 Sum_probs=16.0
Q ss_pred EEEEecCCCCC-CcchHHHHHHHHHhC
Q 030535 45 AILLISDVFGY-EAPLFRKLADKVAGA 70 (175)
Q Consensus 45 ~vv~lhg~~g~-~~~~~~~~a~~la~~ 70 (175)
.||+-||.... ....+..+++.+.++
T Consensus 2 ivlv~hGS~~~~~~~~~~~l~~~l~~~ 28 (101)
T cd03416 2 LLLVGHGSRDPRAAEALEALAERLRER 28 (101)
T ss_pred EEEEEcCCCCHHHHHHHHHHHHHHHhh
Confidence 35566755442 124677888888775
No 251
>COG1564 THI80 Thiamine pyrophosphokinase [Coenzyme metabolism]
Probab=66.07 E-value=19 Score=27.45 Aligned_cols=34 Identities=21% Similarity=0.299 Sum_probs=27.7
Q ss_pred CcchhHHHHHHHHHHhcCCCeEEEEEEeccHHHHH
Q 030535 105 DKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAA 139 (175)
Q Consensus 105 ~~~~~d~~~~~~~l~~~~~~~i~v~G~S~GG~ia~ 139 (175)
++...|.+.+++++.+++.+.|.++|- +||++=-
T Consensus 74 eKd~TD~elAl~~a~e~g~d~i~i~Ga-~GGR~DH 107 (212)
T COG1564 74 EKDSTDLELALDEALERGADEIVILGA-LGGRLDH 107 (212)
T ss_pred hhccchHHHHHHHHHHcCCCEEEEEec-CCChHHH
Confidence 566689999999999999889999884 6886533
No 252
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=65.98 E-value=4.8 Score=32.20 Aligned_cols=31 Identities=23% Similarity=0.233 Sum_probs=25.0
Q ss_pred HHHHHHHHhcCCCeEEEEEEeccHHHHHHhc
Q 030535 112 KSVIAALKSKGVSAIGAAGFCWGGVVAAKLA 142 (175)
Q Consensus 112 ~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a 142 (175)
.+..+.+++.|..+-.++|||+|=..|+.++
T Consensus 72 ~al~~~l~~~Gi~P~~v~GhSlGE~aA~~aa 102 (318)
T PF00698_consen 72 VALARLLRSWGIKPDAVIGHSLGEYAALVAA 102 (318)
T ss_dssp HHHHHHHHHTTHCESEEEESTTHHHHHHHHT
T ss_pred hhhhhhhcccccccceeeccchhhHHHHHHC
Confidence 3456777777888889999999998888665
No 253
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=65.28 E-value=75 Score=26.71 Aligned_cols=99 Identities=16% Similarity=0.167 Sum_probs=54.8
Q ss_pred eEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhH--------HHHHHhcCCCcch-hHHHH
Q 030535 44 SAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDR--------EAWRKIHNTDKGY-VDAKS 113 (175)
Q Consensus 44 ~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~--------~~~~~~~~~~~~~-~d~~~ 113 (175)
|.|+++ |-+..+.+.+..+.+.+.++|..++..|.- .+.+...+.-...+. .......+..+.+ .-...
T Consensus 2 ~tI~ii-gT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~g 80 (403)
T PF06792_consen 2 KTIAII-GTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARG 80 (403)
T ss_pred CEEEEE-EccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHH
Confidence 345555 466777778888999999999999999975 444331111111111 0111000111111 11223
Q ss_pred HHHHHHhc----CCCeEEEEEEeccHHHHHHhcc
Q 030535 114 VIAALKSK----GVSAIGAAGFCWGGVVAAKLAS 143 (175)
Q Consensus 114 ~~~~l~~~----~~~~i~v~G~S~GG~ia~~~a~ 143 (175)
+.+++.++ .++-|.-+|=|.|..++....+
T Consensus 81 a~~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr 114 (403)
T PF06792_consen 81 AARFVSDLYDEGKIDGVIGIGGSGGTALATAAMR 114 (403)
T ss_pred HHHHHHHHHhcCCccEEEEecCCccHHHHHHHHH
Confidence 33344333 3567888899999999988664
No 254
>PRK10279 hypothetical protein; Provisional
Probab=63.56 E-value=8.7 Score=30.77 Aligned_cols=32 Identities=38% Similarity=0.397 Sum_probs=26.9
Q ss_pred HHHHHHHHhcCCCeEEEEEEeccHHHHHHhcc
Q 030535 112 KSVIAALKSKGVSAIGAAGFCWGGVVAAKLAS 143 (175)
Q Consensus 112 ~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a~ 143 (175)
.-+++.|.+.++..=.+.|-|+|+.++..||.
T Consensus 21 iGVL~aL~E~gi~~d~i~GtS~GAlvga~yA~ 52 (300)
T PRK10279 21 IGVINALKKVGIEIDIVAGCSIGSLVGAAYAC 52 (300)
T ss_pred HHHHHHHHHcCCCcCEEEEEcHHHHHHHHHHc
Confidence 45778888888767799999999999999884
No 255
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=62.70 E-value=8.9 Score=30.06 Aligned_cols=30 Identities=27% Similarity=0.333 Sum_probs=23.7
Q ss_pred HHHHHHHhcCCCeEEEEEEeccHHHHHHhc
Q 030535 113 SVIAALKSKGVSAIGAAGFCWGGVVAAKLA 142 (175)
Q Consensus 113 ~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a 142 (175)
+..+.+++.|..+-.++|||+|-..++.++
T Consensus 71 a~~~~l~~~Gi~p~~~~GhSlGE~aA~~~a 100 (298)
T smart00827 71 ALARLWRSWGVRPDAVVGHSLGEIAAAYVA 100 (298)
T ss_pred HHHHHHHHcCCcccEEEecCHHHHHHHHHh
Confidence 455666677877889999999998888755
No 256
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=62.38 E-value=12 Score=25.67 Aligned_cols=15 Identities=13% Similarity=0.337 Sum_probs=12.6
Q ss_pred HHHHHHhCCCEEEec
Q 030535 63 LADKVAGAGFLVVAP 77 (175)
Q Consensus 63 ~a~~la~~G~~vi~~ 77 (175)
..+.|.+.|+.|+.+
T Consensus 99 ~~~~L~~~Gw~Vlr~ 113 (117)
T TIGR00632 99 VNSRLQELGWRVLRV 113 (117)
T ss_pred HHHHHHHCcCEEEEE
Confidence 566889999999986
No 257
>cd03414 CbiX_SirB_C Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), C-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both CbiX and SirB are found in a wide range of bacteria.
Probab=62.07 E-value=44 Score=22.20 Aligned_cols=22 Identities=9% Similarity=0.229 Sum_probs=14.2
Q ss_pred HHHHHHHHHHhcCCCeEEEEEE
Q 030535 110 DAKSVIAALKSKGVSAIGAAGF 131 (175)
Q Consensus 110 d~~~~~~~l~~~~~~~i~v~G~ 131 (175)
++..+++.+.+.+.++|.++=+
T Consensus 46 ~~~~~l~~l~~~g~~~i~vvP~ 67 (117)
T cd03414 46 SLPEALERLRALGARRVVVLPY 67 (117)
T ss_pred CHHHHHHHHHHcCCCEEEEEec
Confidence 3566666666667777777643
No 258
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=60.49 E-value=11 Score=27.19 Aligned_cols=32 Identities=41% Similarity=0.354 Sum_probs=26.4
Q ss_pred HHHHHHHHhcCCCeEEEEEEeccHHHHHHhcc
Q 030535 112 KSVIAALKSKGVSAIGAAGFCWGGVVAAKLAS 143 (175)
Q Consensus 112 ~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a~ 143 (175)
..+++.|.+++...-.+.|-|.|+.++..++.
T Consensus 14 ~Gvl~aL~e~gi~~d~v~GtSaGAi~aa~~a~ 45 (172)
T cd07198 14 VGVAKALRERGPLIDIIAGTSAGAIVAALLAS 45 (172)
T ss_pred HHHHHHHHHcCCCCCEEEEECHHHHHHHHHHc
Confidence 45777888877666689999999999999885
No 259
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=60.04 E-value=10 Score=29.79 Aligned_cols=30 Identities=27% Similarity=0.207 Sum_probs=23.2
Q ss_pred HHHHHHHhcCCCeEEEEEEeccHHHHHHhc
Q 030535 113 SVIAALKSKGVSAIGAAGFCWGGVVAAKLA 142 (175)
Q Consensus 113 ~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a 142 (175)
+..+.+++.+..+-.++|||+|=..++.++
T Consensus 65 al~~~l~~~g~~P~~v~GhS~GE~aAa~~a 94 (295)
T TIGR03131 65 AAWRALLALLPRPSAVAGYSVGEYAAAVVA 94 (295)
T ss_pred HHHHHHHhcCCCCcEEeecCHHHHHHHHHh
Confidence 445556666777889999999998888755
No 260
>cd08194 Fe-ADH6 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenase-like. Proteins of this family have not been characterized. Their specific function is unknown. The protein structure represents a dehydroquinate synthase-like fold and belongs to the alcohol dehydrogenase-like superfamily. They are distinct from other alcohol dehydrogenases which contain different protein domains. Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions.
Probab=59.99 E-value=66 Score=26.44 Aligned_cols=63 Identities=22% Similarity=0.225 Sum_probs=40.9
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcCCCe
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVSA 125 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~ 125 (175)
++++.+..-.....+..+.+.|.+.|..+..+|-..++|. .+++..+++.+++.+.+-
T Consensus 26 ~livt~~~~~~~g~~~~v~~~L~~~gi~~~~~~~v~~~p~----------------------~~~v~~~~~~~~~~~~D~ 83 (375)
T cd08194 26 PLIVTDKVMVKLGLVDKLTDSLKKEGIESAIFDDVVSEPT----------------------DESVEEGVKLAKEGGCDV 83 (375)
T ss_pred EEEEcCcchhhcchHHHHHHHHHHCCCeEEEECCCCCCcC----------------------HHHHHHHHHHHHhcCCCE
Confidence 5566654333334677888999888998888774333332 166888888888877774
Q ss_pred EEEEE
Q 030535 126 IGAAG 130 (175)
Q Consensus 126 i~v~G 130 (175)
|.-+|
T Consensus 84 IIaiG 88 (375)
T cd08194 84 IIALG 88 (375)
T ss_pred EEEeC
Confidence 44343
No 261
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=59.48 E-value=35 Score=24.68 Aligned_cols=36 Identities=17% Similarity=0.067 Sum_probs=25.4
Q ss_pred CCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEecc
Q 030535 42 SKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPD 78 (175)
Q Consensus 42 ~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D 78 (175)
..+.|+++- |.|.+...-...|++|+++|+.|.++-
T Consensus 24 ~~~~v~il~-G~GnNGgDgl~~AR~L~~~G~~V~v~~ 59 (169)
T PF03853_consen 24 KGPRVLILC-GPGNNGGDGLVAARHLANRGYNVTVYL 59 (169)
T ss_dssp TT-EEEEEE--SSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCeEEEEE-CCCCChHHHHHHHHHHHHCCCeEEEEE
Confidence 445677777 446555566678999999999988833
No 262
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=58.62 E-value=15 Score=29.94 Aligned_cols=32 Identities=34% Similarity=0.331 Sum_probs=25.7
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF 80 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~ 80 (175)
|||+|..+.. .++.+++.|+++|+.|..+-..
T Consensus 2 il~~~~~~p~---~~~~la~~L~~~G~~v~~~~~~ 33 (396)
T cd03818 2 ILFVHQNFPG---QFRHLAPALAAQGHEVVFLTEP 33 (396)
T ss_pred EEEECCCCch---hHHHHHHHHHHCCCEEEEEecC
Confidence 7899977764 3678999999999988876643
No 263
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ]. Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in S. typhimurium) [, ]. The corresponding cobalt chelatases are not homologous. This group belongs to the class of ATP-independent, single-subunit chelatases that also includes distantly related protoporphyrin IX (PPIX) ferrochelatase (HemH) (Class II chelatases) []. The structure of S. typhimurium CbiK shows that it has a remarkably similar topology to Bacillus subtilis ferrochelatase despite only weak sequence conservation []. Both enzymes contain a histidine residue identified as the metal ion ligand, but CbiK contains a second histidine in place of the glutamic acid residue identified as a general base in PPIX ferrochelatase []. Site-directed mutagenesis has confirmed a role for this histidine and a nearby glutamic acid in cobalt binding, modulating metal ion specificity as well as catalytic efficiency []. It should be noted that CysG and Met8p, which are multifunctional proteins associated with siroheme biosynthesis, include chelatase activity and can therefore be considered as the third class of chelatases []. As with the class II chelatases, they do not require ATP for activity. However, they are not structurally similar to HemH or CbiK, and it is likely that they have arisen by the acquisition of a chelatase function within a dehydrogenase catalytic framework [, ].; GO: 0016852 sirohydrochlorin cobaltochelatase activity; PDB: 1QGO_A 2XWP_A 2XVZ_A 2XVX_A 2XVY_A.
Probab=58.51 E-value=37 Score=26.72 Aligned_cols=61 Identities=20% Similarity=0.279 Sum_probs=33.5
Q ss_pred CCeEEEEecCCCCCC-cchHHHHHHHHHhCCC---EEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHH
Q 030535 42 SKSAILLISDVFGYE-APLFRKLADKVAGAGF---LVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAA 117 (175)
Q Consensus 42 ~~~~vv~lhg~~g~~-~~~~~~~a~~la~~G~---~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 117 (175)
..+.|++-| |.... ...|..+...|.+.|+ .|-+.+ |. .+++.+++.
T Consensus 141 ~~a~vlmGH-Gt~h~an~~Y~~l~~~l~~~~~~~v~vgtvE---G~-------------------------P~~~~vi~~ 191 (262)
T PF06180_consen 141 DEAVVLMGH-GTPHPANAAYSALQAMLKKHGYPNVFVGTVE---GY-------------------------PSLEDVIAR 191 (262)
T ss_dssp TEEEEEEE----SCHHHHHHHHHHHHHHCCT-TTEEEEETT---SS-------------------------SBHHHHHHH
T ss_pred CCEEEEEeC-CCCCCccHHHHHHHHHHHhCCCCeEEEEEeC---CC-------------------------CCHHHHHHH
Confidence 334455555 54422 2456777778877763 333333 22 336777788
Q ss_pred HHhcCCCeEEEEEE
Q 030535 118 LKSKGVSAIGAAGF 131 (175)
Q Consensus 118 l~~~~~~~i~v~G~ 131 (175)
|++.+..++.++=+
T Consensus 192 L~~~g~k~V~L~Pl 205 (262)
T PF06180_consen 192 LKKKGIKKVHLIPL 205 (262)
T ss_dssp HHHHT-SEEEEEEE
T ss_pred HHhcCCCeEEEEec
Confidence 88878778777654
No 264
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=57.98 E-value=13 Score=29.92 Aligned_cols=60 Identities=23% Similarity=0.295 Sum_probs=40.9
Q ss_pred hHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcCCCeEEEEEEeccHHHH
Q 030535 59 LFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVA 138 (175)
Q Consensus 59 ~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~v~G~S~GG~ia 138 (175)
.+..++++|..+. ..++++ +|... ... -..+++.|.++++.-=.++|-|+|+.++
T Consensus 3 d~~rl~r~l~~~~-~gLvL~--GGG~R-----------G~a-----------hiGvL~aLee~gi~~d~v~GtSaGAi~g 57 (306)
T cd07225 3 DFSRLARVLTGNS-IALVLG--GGGAR-----------GCA-----------HIGVIKALEEAGIPVDMVGGTSIGAFIG 57 (306)
T ss_pred hHHHHHHHhcCCC-EEEEEC--ChHHH-----------HHH-----------HHHHHHHHHHcCCCCCEEEEECHHHHHH
Confidence 5678888887764 344444 33221 111 3457788888876556889999999999
Q ss_pred HHhcc
Q 030535 139 AKLAS 143 (175)
Q Consensus 139 ~~~a~ 143 (175)
..+|.
T Consensus 58 a~ya~ 62 (306)
T cd07225 58 ALYAE 62 (306)
T ss_pred HHHHc
Confidence 99874
No 265
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=57.19 E-value=14 Score=27.02 Aligned_cols=32 Identities=31% Similarity=0.344 Sum_probs=25.3
Q ss_pred HHHHHHHHhcCCCeEEEEEEeccHHHHHHhcc
Q 030535 112 KSVIAALKSKGVSAIGAAGFCWGGVVAAKLAS 143 (175)
Q Consensus 112 ~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a~ 143 (175)
..+++.|.+++...=.+.|-|.|+.++..++.
T Consensus 15 ~Gvl~~L~e~~~~~d~i~GtSaGai~aa~~a~ 46 (194)
T cd07207 15 IGALKALEEAGILKKRVAGTSAGAITAALLAL 46 (194)
T ss_pred HHHHHHHHHcCCCcceEEEECHHHHHHHHHHc
Confidence 45677777776555689999999999998774
No 266
>PF03283 PAE: Pectinacetylesterase
Probab=56.85 E-value=14 Score=30.46 Aligned_cols=34 Identities=26% Similarity=0.257 Sum_probs=28.6
Q ss_pred hHHHHHHHHHHhcC---CCeEEEEEEeccHHHHHHhc
Q 030535 109 VDAKSVIAALKSKG---VSAIGAAGFCWGGVVAAKLA 142 (175)
Q Consensus 109 ~d~~~~~~~l~~~~---~~~i~v~G~S~GG~ia~~~a 142 (175)
..+++++++|.+++ .+++.|.|-|.||.-++.-+
T Consensus 138 ~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~ 174 (361)
T PF03283_consen 138 RILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHA 174 (361)
T ss_pred HHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHH
Confidence 56789999998763 46899999999999999744
No 267
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=56.77 E-value=26 Score=27.93 Aligned_cols=17 Identities=24% Similarity=0.225 Sum_probs=14.9
Q ss_pred EEEEEeccHHHHHHhcc
Q 030535 127 GAAGFCWGGVVAAKLAS 143 (175)
Q Consensus 127 ~v~G~S~GG~ia~~~a~ 143 (175)
.+.|-|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 58999999999998874
No 268
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=55.95 E-value=15 Score=29.01 Aligned_cols=32 Identities=22% Similarity=0.329 Sum_probs=26.1
Q ss_pred HHHHHHHHhcCCCeEEEEEEeccHHHHHHhcc
Q 030535 112 KSVIAALKSKGVSAIGAAGFCWGGVVAAKLAS 143 (175)
Q Consensus 112 ~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a~ 143 (175)
..+++.|.++++.-=.+.|-|+|+.++..+|.
T Consensus 26 iGVL~aLeE~gi~~d~v~GtSaGAiiga~ya~ 57 (269)
T cd07227 26 IGILQALEEAGIPIDAIGGTSIGSFVGGLYAR 57 (269)
T ss_pred HHHHHHHHHcCCCccEEEEECHHHHHHHHHHc
Confidence 45777888877655588999999999999875
No 269
>PF10096 DUF2334: Uncharacterized protein conserved in bacteria (DUF2334); InterPro: IPR018763 This group of proteins has no known function.
Probab=55.92 E-value=92 Score=24.03 Aligned_cols=71 Identities=20% Similarity=0.295 Sum_probs=43.6
Q ss_pred EEEEecCCCC-CCcchHHHHHHHHHhCCC---EEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHh
Q 030535 45 AILLISDVFG-YEAPLFRKLADKVAGAGF---LVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKS 120 (175)
Q Consensus 45 ~vv~lhg~~g-~~~~~~~~~a~~la~~G~---~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~ 120 (175)
++|.+|+... .+.+.++.+++.|.++|+ ..+.|++ .++. ... ..++. ...++...++++.+
T Consensus 2 ~lirleDVsP~~~~~~l~~i~d~l~~~~ipf~v~vIP~~--~d~~--~~~-~~~l~----------~~~~f~~~L~~~~~ 66 (243)
T PF10096_consen 2 ALIRLEDVSPFSDLEKLKEIADYLYKYGIPFSVAVIPVY--VDPN--GGI-TVNLS----------DNPEFVEYLRYLQA 66 (243)
T ss_pred cEEEEeCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEecc--cCCC--Ccc-cccch----------hhHHHHHHHHHHHh
Confidence 5888998877 666889999999999995 3445553 2222 000 00110 01556777788877
Q ss_pred cCCCeEEEEEE
Q 030535 121 KGVSAIGAAGF 131 (175)
Q Consensus 121 ~~~~~i~v~G~ 131 (175)
+| ..|++-|.
T Consensus 67 ~G-g~I~lHGY 76 (243)
T PF10096_consen 67 RG-GEIVLHGY 76 (243)
T ss_pred cC-CEEEEEec
Confidence 64 36666664
No 270
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=55.43 E-value=17 Score=27.67 Aligned_cols=32 Identities=28% Similarity=0.348 Sum_probs=25.2
Q ss_pred HHHHHHHHhcCCCeEEEEEEeccHHHHHHhcc
Q 030535 112 KSVIAALKSKGVSAIGAAGFCWGGVVAAKLAS 143 (175)
Q Consensus 112 ~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a~ 143 (175)
..+++.|.+.+...-.+.|-|.|+.++..+|.
T Consensus 16 ~GvL~aL~e~gi~~~~i~GtSaGAi~aa~~a~ 47 (221)
T cd07210 16 LGFLAALLEMGLEPSAISGTSAGALVGGLFAS 47 (221)
T ss_pred HHHHHHHHHcCCCceEEEEeCHHHHHHHHHHc
Confidence 35667777776655579999999999998874
No 271
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=54.52 E-value=18 Score=28.47 Aligned_cols=34 Identities=9% Similarity=0.167 Sum_probs=26.7
Q ss_pred eEEEEecCCCCCCcchHHHHHHHHHhCCCEEEecc
Q 030535 44 SAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPD 78 (175)
Q Consensus 44 ~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D 78 (175)
..||++|... .+...+..+.+.|.++||.+++++
T Consensus 231 G~IILmHd~~-~T~~aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 231 GAMVLMHPTA-SSTEGLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred CcEEEEcCCc-cHHHHHHHHHHHHHHCCCEEEeHH
Confidence 3588999653 334678889999999999998875
No 272
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=54.31 E-value=14 Score=28.73 Aligned_cols=30 Identities=30% Similarity=0.241 Sum_probs=22.3
Q ss_pred HHHHHHHhcC-CCeEEEEEEeccHHHHHHhc
Q 030535 113 SVIAALKSKG-VSAIGAAGFCWGGVVAAKLA 142 (175)
Q Consensus 113 ~~~~~l~~~~-~~~i~v~G~S~GG~ia~~~a 142 (175)
+..+.+++.+ ..+-.++|||+|=..++..+
T Consensus 71 al~~~l~~~g~i~p~~v~GhS~GE~aAa~~a 101 (290)
T TIGR00128 71 ILYLKLKEQGGLKPDFAAGHSLGEYSALVAA 101 (290)
T ss_pred HHHHHHHHcCCCCCCEEeecCHHHHHHHHHh
Confidence 3444555666 77889999999998887655
No 273
>PHA01735 hypothetical protein
Probab=54.05 E-value=12 Score=23.09 Aligned_cols=23 Identities=22% Similarity=0.378 Sum_probs=18.4
Q ss_pred hhHHHHHHHHHHhcCCCeEEEEE
Q 030535 108 YVDAKSVIAALKSKGVSAIGAAG 130 (175)
Q Consensus 108 ~~d~~~~~~~l~~~~~~~i~v~G 130 (175)
..|+.++++|++++++..+.+-|
T Consensus 32 taDL~AA~d~Lk~NdItgv~~~g 54 (76)
T PHA01735 32 TADLRAACDWLKSNDITGVAVDG 54 (76)
T ss_pred HHHHHHHHHHHHHCCCceeeCCC
Confidence 48999999999999877555544
No 274
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=53.11 E-value=30 Score=27.25 Aligned_cols=37 Identities=16% Similarity=0.181 Sum_probs=29.5
Q ss_pred CCeEEEEecCCCC-CCcchHHHHHHHHHhCCCEEEecc
Q 030535 42 SKSAILLISDVFG-YEAPLFRKLADKVAGAGFLVVAPD 78 (175)
Q Consensus 42 ~~~~vv~lhg~~g-~~~~~~~~~a~~la~~G~~vi~~D 78 (175)
..|.||+|.|+-+ ........+.+.|--+|+.|.++.
T Consensus 54 ~~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~ 91 (264)
T TIGR03709 54 RRSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFK 91 (264)
T ss_pred CCcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCC
Confidence 4588999997654 334667889999999999999986
No 275
>PRK05368 homoserine O-succinyltransferase; Provisional
Probab=52.46 E-value=16 Score=29.35 Aligned_cols=31 Identities=16% Similarity=0.265 Sum_probs=25.6
Q ss_pred hHHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhc
Q 030535 109 VDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLA 142 (175)
Q Consensus 109 ~d~~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a 142 (175)
+++..+++|+++. .+-++|.|||..+++.+.
T Consensus 122 ~El~~i~~w~~~~---~~s~LgICwGaQa~a~al 152 (302)
T PRK05368 122 DELKEILDWAKTH---VTSTLFICWAAQAALYHL 152 (302)
T ss_pred HHHHHHHHHHHHc---CCCEEEEcHHHHHHHHHc
Confidence 4588899999875 568999999999999744
No 276
>COG0603 Predicted PP-loop superfamily ATPase [General function prediction only]
Probab=52.44 E-value=70 Score=24.55 Aligned_cols=36 Identities=28% Similarity=0.343 Sum_probs=24.3
Q ss_pred CeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCCCCC
Q 030535 43 KSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGD 83 (175)
Q Consensus 43 ~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~~g~ 83 (175)
.++||++.||..+. -.+.++.++++.|.+.-+.+|+
T Consensus 3 ~kavvl~SGG~DSt-----t~l~~a~~~~~ev~alsfdYGQ 38 (222)
T COG0603 3 KKAVVLLSGGLDST-----TCLAWAKKEGYEVHALTFDYGQ 38 (222)
T ss_pred ceEEEEccCChhHH-----HHHHHHHhcCCEEEEEEeeCCC
Confidence 46899999776643 2455566678877776655675
No 277
>PRK06490 glutamine amidotransferase; Provisional
Probab=52.27 E-value=37 Score=26.15 Aligned_cols=17 Identities=24% Similarity=0.395 Sum_probs=14.1
Q ss_pred eEEEEEEeccHHHHHHh
Q 030535 125 AIGAAGFCWGGVVAAKL 141 (175)
Q Consensus 125 ~i~v~G~S~GG~ia~~~ 141 (175)
++=++|.|+|..+...+
T Consensus 86 ~~PvLGIC~G~Qlla~a 102 (239)
T PRK06490 86 NKPFLGICLGAQMLARH 102 (239)
T ss_pred CCCEEEECHhHHHHHHH
Confidence 45699999999988874
No 278
>cd08189 Fe-ADH5 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenase-like. Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions. The protein structure represents a dehydroquinate synthase-like fold and belongs to the alcohol dehydrogenase-like superfamily. They are distinct from other alcohol dehydrogenases which contains different protein domain. Proteins of this family have not been characterized. Their specific function is unknown.
Probab=51.90 E-value=88 Score=25.70 Aligned_cols=63 Identities=24% Similarity=0.281 Sum_probs=39.3
Q ss_pred EEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcCCC
Q 030535 45 AILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVS 124 (175)
Q Consensus 45 ~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~ 124 (175)
.++++.+..-.+...+..+.+.|.+.|+.+..+|-...++. .+++..+++.+++.+.+
T Consensus 28 ~~lvvt~~~~~~~g~~~~v~~~L~~~g~~~~~~~~v~~~p~----------------------~~~v~~~~~~~~~~~~d 85 (374)
T cd08189 28 KVLIVTDKGLVKLGLLDKVLEALEGAGIEYAVYDGVPPDPT----------------------IENVEAGLALYRENGCD 85 (374)
T ss_pred eEEEEeCcchhhcccHHHHHHHHHhcCCeEEEeCCCCCCcC----------------------HHHHHHHHHHHHhcCCC
Confidence 46666654333323567788889888998887763222222 15678888888887777
Q ss_pred eEEEE
Q 030535 125 AIGAA 129 (175)
Q Consensus 125 ~i~v~ 129 (175)
-|.-+
T Consensus 86 ~IIai 90 (374)
T cd08189 86 AILAV 90 (374)
T ss_pred EEEEe
Confidence 43333
No 279
>PRK15454 ethanol dehydrogenase EutG; Provisional
Probab=51.88 E-value=1e+02 Score=25.66 Aligned_cols=63 Identities=21% Similarity=0.277 Sum_probs=39.8
Q ss_pred EEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcCCC
Q 030535 45 AILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVS 124 (175)
Q Consensus 45 ~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~ 124 (175)
.++++.+..-.....+..+.+.|.+.|..+..+|-...+|. .+++...++.+++.+.+
T Consensus 51 ~~lvv~~~~~~~~g~~~~v~~~L~~~gi~~~~~~~v~~~P~----------------------~~~v~~~~~~~r~~~~D 108 (395)
T PRK15454 51 HLFVMADSFLHQAGMTAGLTRSLAVKGIAMTLWPCPVGEPC----------------------ITDVCAAVAQLRESGCD 108 (395)
T ss_pred EEEEEcCcchhhCccHHHHHHHHHHcCCeEEEECCCCCCcC----------------------HHHHHHHHHHHHhcCcC
Confidence 34445433222234577888899888988887774333333 15688888888888777
Q ss_pred eEEEE
Q 030535 125 AIGAA 129 (175)
Q Consensus 125 ~i~v~ 129 (175)
-|.-+
T Consensus 109 ~Iiav 113 (395)
T PRK15454 109 GVIAF 113 (395)
T ss_pred EEEEe
Confidence 44443
No 280
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=51.69 E-value=11 Score=30.38 Aligned_cols=41 Identities=17% Similarity=0.208 Sum_probs=24.8
Q ss_pred CeeEEEEccCCCCCCeEEEEecCCCCCCcch-HHHHHHHHHhCC
Q 030535 29 GLNTYVTGSGPPDSKSAILLISDVFGYEAPL-FRKLADKVAGAG 71 (175)
Q Consensus 29 ~~~~~~~~p~~~~~~~~vv~lhg~~g~~~~~-~~~~a~~la~~G 71 (175)
.++.|+. .+...+|.||=+|||.|.-.+. -+-+|+.+.+.|
T Consensus 97 alk~~~~--n~~p~KPLvLSfHG~tGTGKN~Va~iiA~n~~~~G 138 (344)
T KOG2170|consen 97 ALKSHWA--NPNPRKPLVLSFHGWTGTGKNYVAEIIAENLYRGG 138 (344)
T ss_pred HHHHHhc--CCCCCCCeEEEecCCCCCchhHHHHHHHHHHHhcc
Confidence 3556666 4455778899999998864322 123444554445
No 281
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=51.55 E-value=79 Score=24.23 Aligned_cols=39 Identities=15% Similarity=0.125 Sum_probs=28.4
Q ss_pred CCeEEEEecCCCCCCc--chHHHHHHHHHhCCCEEEeccCC
Q 030535 42 SKSAILLISDVFGYEA--PLFRKLADKVAGAGFLVVAPDFF 80 (175)
Q Consensus 42 ~~~~vv~lhg~~g~~~--~~~~~~a~~la~~G~~vi~~D~~ 80 (175)
..+.|.|++-...... .+.....+.|++.|..+.-.++.
T Consensus 31 ~~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l~ 71 (224)
T COG3340 31 KRKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHLS 71 (224)
T ss_pred CCceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeecc
Confidence 3567999986655432 25677788899999999988863
No 282
>cd03415 CbiX_CbiC Archaeal sirohydrochlorin cobalt chelatase (CbiX) single domain. Proteins in this subgroup contain a single CbiX domain N-terminal to a precorrin-8X methylmutase (CbiC) domain. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, while CbiC catalyzes the conversion of cobalt-precorrin 8 to cobyrinic acid by methyl rearrangement. Both CbiX and CbiC are involved in vitamin B12 biosynthesis.
Probab=51.03 E-value=79 Score=21.78 Aligned_cols=20 Identities=25% Similarity=0.185 Sum_probs=15.4
Q ss_pred HHHHHHHHHhcCCCeEEEEE
Q 030535 111 AKSVIAALKSKGVSAIGAAG 130 (175)
Q Consensus 111 ~~~~~~~l~~~~~~~i~v~G 130 (175)
+.+.++.+.++|.++|.++=
T Consensus 46 l~~~l~~l~~~G~~~ivVvP 65 (125)
T cd03415 46 WRDLLNELLSEGYGHIIIAL 65 (125)
T ss_pred HHHHHHHHHHCCCCEEEEeh
Confidence 66777777777888888875
No 283
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=49.16 E-value=19 Score=28.62 Aligned_cols=32 Identities=34% Similarity=0.376 Sum_probs=27.1
Q ss_pred HHHHHHHHhcCCCeEEEEEEeccHHHHHHhcc
Q 030535 112 KSVIAALKSKGVSAIGAAGFCWGGVVAAKLAS 143 (175)
Q Consensus 112 ~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a~ 143 (175)
.-+++.|.+.+...-.+.|-|+|+.++..+|.
T Consensus 27 iGVl~aL~e~gi~~~~iaGtS~GAiva~l~A~ 58 (306)
T COG1752 27 IGVLKALEEAGIPIDVIAGTSAGAIVAALYAA 58 (306)
T ss_pred HHHHHHHHHcCCCccEEEecCHHHHHHHHHHc
Confidence 35777888888777899999999999999884
No 284
>cd08551 Fe-ADH iron-containing alcohol dehydrogenases (Fe-ADH)-like. Large metal-containing alcohol dehydrogenases (ADH), known as iron-containing alcohol dehydrogenases. They contain a dehydroquinate synthase-like protein structural fold and mostly contain iron. They are distinct from other alcohol dehydrogenases which contains different protein domains. There are several distinct families of alcohol dehydrogenases: Zinc-containing long-chain alcohol dehydrogenases; insect-type, or short-chain alcohol dehydrogenases; iron-containing alcohol dehydrogenases, and others. The iron-containing family has a Rossmann fold-like topology that resembles the fold of the zinc-dependent alcohol dehydrogenases, but lacks sequence homology, and differs in strand arrangement. ADH catalyzes the reversible oxidation of alcohol to acetaldehyde with the simultaneous reduction of NAD(P)+ to NAD(P)H.
Probab=48.87 E-value=1.4e+02 Score=24.44 Aligned_cols=61 Identities=21% Similarity=0.279 Sum_probs=38.0
Q ss_pred EEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcCCC
Q 030535 45 AILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVS 124 (175)
Q Consensus 45 ~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~ 124 (175)
.++++.+....+......+.+.|.++|+.+..++-...++. .+++..+++.+++.+.+
T Consensus 25 ~~lvv~~~~~~~~~~~~~v~~~L~~~~~~~~~~~~~~~~p~----------------------~~~v~~~~~~~~~~~~d 82 (370)
T cd08551 25 KALIVTDPGLVKTGVLDKVIDSLKEAGIEVVIFDGVEPNPT----------------------LSNVDAAVAAYREEGCD 82 (370)
T ss_pred eEEEEeCcchhhCccHHHHHHHHHHcCCeEEEECCCCCCCC----------------------HHHHHHHHHHHHhcCCC
Confidence 34555544333225567788899888998877763222222 16688888888877777
Q ss_pred eEE
Q 030535 125 AIG 127 (175)
Q Consensus 125 ~i~ 127 (175)
-|.
T Consensus 83 ~Ii 85 (370)
T cd08551 83 GVI 85 (370)
T ss_pred EEE
Confidence 433
No 285
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=48.76 E-value=27 Score=25.06 Aligned_cols=32 Identities=28% Similarity=0.340 Sum_probs=24.6
Q ss_pred HHHHHHHHhcCCCeEEEEEEeccHHHHHHhcc
Q 030535 112 KSVIAALKSKGVSAIGAAGFCWGGVVAAKLAS 143 (175)
Q Consensus 112 ~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a~ 143 (175)
..+++.|.+++...=.+.|-|.|+.++..++.
T Consensus 16 ~Gvl~~L~~~~~~~d~i~GtSaGal~a~~~a~ 47 (175)
T cd07205 16 IGVLKALEEAGIPIDIVSGTSAGAIVGALYAA 47 (175)
T ss_pred HHHHHHHHHcCCCeeEEEEECHHHHHHHHHHc
Confidence 45666777666555589999999999998874
No 286
>cd08171 GlyDH-like2 Glycerol dehydrogenase-like. Glycerol dehydrogenases-like. The proteins in this family have not been characterized, but they show sequence homology with glycerol dehydrogenase. Glycerol dehydrogenases (GlyDH) is a key enzyme in the glycerol dissimilation pathway. In anaerobic conditions, many microorganisms utilize glycerol as a source of carbon through coupled oxidative and reductive pathways. One of the pathways involves the oxidation of glycerol to dihydroxyacetone with the reduction of NAD+ to NADH catalyzed by glycerol dehydrogenases. Dihydroxyacetone is then phosphorylated by dihydroxyacetone kinase and enters the glycolytic pathway for further degradation. The activity of GlyDH is zinc-dependent. The zinc ion plays a role in stabilizing an alkoxide intermediate at the active site.
Probab=47.77 E-value=63 Score=26.23 Aligned_cols=63 Identities=11% Similarity=0.144 Sum_probs=39.5
Q ss_pred EEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcCCC
Q 030535 45 AILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVS 124 (175)
Q Consensus 45 ~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~ 124 (175)
-++++++..... .....+.+.|.++|..+..++-..+++. . +++..+++..++.+.+
T Consensus 24 r~liv~d~~~~~-~~~~~v~~~l~~~~~~~~~~~~~~~~p~---------~-------------~~v~~~~~~~~~~~~d 80 (345)
T cd08171 24 KVVVIGGKTALA-AAKDKIKAALEQSGIEITDFIWYGGEST---------Y-------------ENVERLKKNPAVQEAD 80 (345)
T ss_pred EEEEEeCHHHHH-HHHHHHHHHHHHCCCeEEEEEecCCCCC---------H-------------HHHHHHHHHHhhcCCC
Confidence 366666543332 3466778888888988887775444433 1 5577777778777666
Q ss_pred eEEEEE
Q 030535 125 AIGAAG 130 (175)
Q Consensus 125 ~i~v~G 130 (175)
-|.-+|
T Consensus 81 ~iiavG 86 (345)
T cd08171 81 MIFAVG 86 (345)
T ss_pred EEEEeC
Confidence 444443
No 287
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=47.54 E-value=35 Score=26.39 Aligned_cols=33 Identities=27% Similarity=0.274 Sum_probs=22.6
Q ss_pred eEEEEecCCCCCCcchHHHHHHHHHhCCCEEEecc
Q 030535 44 SAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPD 78 (175)
Q Consensus 44 ~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D 78 (175)
+.+|++.|....- --..++..|+++||.|++-.
T Consensus 7 ~k~VlItgcs~GG--IG~ala~ef~~~G~~V~Ata 39 (289)
T KOG1209|consen 7 PKKVLITGCSSGG--IGYALAKEFARNGYLVYATA 39 (289)
T ss_pred CCeEEEeecCCcc--hhHHHHHHHHhCCeEEEEEc
Confidence 3455555544322 23578999999999999865
No 288
>cd08178 AAD_C C-terminal alcohol dehydrogenase domain of the acetaldehyde dehydrogenase-alcohol dehydrogenase bifunctional two-domain protein (AAD). Alcohol dehydrogenase domain located on the C-terminal of a bifunctional two-domain protein. The N-terminal of the protein contains an acetaldehyde-CoA dehydrogenase domain. This protein is involved in pyruvate metabolism. Pyruvate is converted to acetyl-CoA and formate by pyruvate formate-lysase (PFL). Under anaerobic condition, acetyl-CoA is reduced to acetaldehyde and ethanol by this two-domain protein. Acetyl-CoA is first converted into an enzyme-bound thiohemiacetal by the N-terminal acetaldehyde dehydrogenase domain. The enzyme-bound thiohemiacetal is subsequently reduced by the C-terminal NAD+-dependent alcohol dehydrogenase domain. In E. coli, this protein is called AdhE and was shown pyruvate formate-lysase (PFL) deactivase activity, which is involved in the inactivation of PFL, a key enzyme in anaerobic metabolism. In Escherichi
Probab=47.42 E-value=88 Score=25.96 Aligned_cols=62 Identities=16% Similarity=0.099 Sum_probs=38.8
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcCCCe
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVSA 125 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~ 125 (175)
++++.+..-.....+..+.+.|.+.|+.+..+|-...++. . +.+..+++.+++.+.+-
T Consensus 24 ~liVtd~~~~~~g~~~~v~~~L~~~gi~~~~f~~v~~~p~---------~-------------~~v~~~~~~~~~~~~D~ 81 (398)
T cd08178 24 AFIVTDRFMVKLGYVDKVIDVLKRRGVETEVFSDVEPDPS---------L-------------ETVRKGLELMNSFKPDT 81 (398)
T ss_pred EEEEcChhHHhCccHHHHHHHHHHCCCeEEEecCCCCCcC---------H-------------HHHHHHHHHHHhcCCCE
Confidence 5566643322223667788899999998887763222222 1 56778888888877774
Q ss_pred EEEE
Q 030535 126 IGAA 129 (175)
Q Consensus 126 i~v~ 129 (175)
|.-+
T Consensus 82 IIai 85 (398)
T cd08178 82 IIAL 85 (398)
T ss_pred EEEe
Confidence 4433
No 289
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=47.32 E-value=24 Score=26.56 Aligned_cols=33 Identities=24% Similarity=0.318 Sum_probs=25.8
Q ss_pred HHHHHHHHhcCCCeEEEEEEeccHHHHHHhccC
Q 030535 112 KSVIAALKSKGVSAIGAAGFCWGGVVAAKLASS 144 (175)
Q Consensus 112 ~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a~~ 144 (175)
..+++.|.+.+..-=.+.|.|.|+..+..+|..
T Consensus 14 ~Gvl~aL~e~g~~~d~i~GtS~GAl~aa~~a~~ 46 (215)
T cd07209 14 AGVLKALAEAGIEPDIISGTSIGAINGALIAGG 46 (215)
T ss_pred HHHHHHHHHcCCCCCEEEEECHHHHHHHHHHcC
Confidence 346777777766555889999999999998854
No 290
>cd08192 Fe-ADH7 Iron-containing alcohol dehydrogenases-like, involved in the linear alkylbenzenesulfonate (LAS) degradation pathway. NAD-dependent iron-containing alcohol dehydrogenase-like. Proteins in this family are NAD-dependent alcohol dehydrogenases which are involved in the linear alkylbenzenesulfonate (LAS) degradation pathway. They catalyze the oxidation of beta-hydroxy CoA ester to beta-oxo CoA ester, which then be subject to CoA-dependent thiolysis to yield acetyl-CoA and 6-C8-SPC-CoA. The major laundry surfactant in worldwide use is commercial linear alkylbenzenesulfonate (LAS) which contains 20 congeners of linear alkanes (C10 to C13). LAS is fully biodegradable in oxic environments. Degradation involves microbial communities. Parvibaculum lavamentivorans DS-1T is a representative member of many heterotrophic, LAS-degrading communities, in which it catalyzes the first steps of LAS degradation. Strain DS-1T is a small heterotrophic bacterium able to omega-oxygenate the comm
Probab=47.11 E-value=1.4e+02 Score=24.39 Aligned_cols=63 Identities=17% Similarity=0.156 Sum_probs=38.6
Q ss_pred EEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcCCC
Q 030535 45 AILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVS 124 (175)
Q Consensus 45 ~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~ 124 (175)
-++++.+..-.....+..+.+.|.+.|+.+..+|-....+. . +.+..+++.+++.+.+
T Consensus 26 ~~liv~~~~~~~~~~~~~v~~~L~~~g~~~~~~~~v~~~p~---------~-------------~~v~~~~~~~~~~~~d 83 (370)
T cd08192 26 RPLIVTDPGLAALGLVARVLALLEDAGLAAALFDEVPPNPT---------E-------------AAVEAGLAAYRAGGCD 83 (370)
T ss_pred eEEEEcCcchhhCccHHHHHHHHHHcCCeEEEeCCCCCCCC---------H-------------HHHHHHHHHHHhcCCC
Confidence 35555543323333577888899988998877763222222 1 5577788888877777
Q ss_pred eEEEE
Q 030535 125 AIGAA 129 (175)
Q Consensus 125 ~i~v~ 129 (175)
-|.-+
T Consensus 84 ~IIai 88 (370)
T cd08192 84 GVIAF 88 (370)
T ss_pred EEEEe
Confidence 44433
No 291
>COG3494 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=46.85 E-value=68 Score=25.29 Aligned_cols=59 Identities=15% Similarity=0.208 Sum_probs=40.9
Q ss_pred HHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcCCCeEEEEE
Q 030535 61 RKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVSAIGAAG 130 (175)
Q Consensus 61 ~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~v~G 130 (175)
..+++....+|+.++..-++.-... .|....+-...+.++-.++++++.++.+++.+.|
T Consensus 18 ~~va~~a~~~G~~~~ii~l~~eaD~-----------~~~~~e~~~~~iG~vg~lik~l~~~~v~~vVl~G 76 (279)
T COG3494 18 LEVAENARNQGYAPFIIGLRGEADP-----------ELKEFEYKEVSIGEVGKLIKLLKTEGVDRVVLAG 76 (279)
T ss_pred HHHHHHHHhCCCCcEEEEecCccch-----------hhhcCCCeEEeHHHHHHHHHHHHHcCCcEEEEec
Confidence 4688999999999999887522111 0211111223457899999999999999988887
No 292
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=46.64 E-value=23 Score=27.05 Aligned_cols=33 Identities=33% Similarity=0.289 Sum_probs=26.3
Q ss_pred HHHHHHHHhcCCC--eEEEEEEeccHHHHHHhccC
Q 030535 112 KSVIAALKSKGVS--AIGAAGFCWGGVVAAKLASS 144 (175)
Q Consensus 112 ~~~~~~l~~~~~~--~i~v~G~S~GG~ia~~~a~~ 144 (175)
..++++|.+++.. .-.+.|-|.|+.++..++..
T Consensus 15 ~GVl~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg 49 (233)
T cd07224 15 LGVLSLLIEAGVINETTPLAGASAGSLAAACSASG 49 (233)
T ss_pred HHHHHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcC
Confidence 4678888888754 34899999999999998753
No 293
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=46.53 E-value=48 Score=25.54 Aligned_cols=38 Identities=11% Similarity=0.135 Sum_probs=29.6
Q ss_pred CCeEEEEecCCCC-CCcchHHHHHHHHHhCCCEEEeccC
Q 030535 42 SKSAILLISDVFG-YEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 42 ~~~~vv~lhg~~g-~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
..|.||+|.|+-+ ........+...|--+|+.|.++.-
T Consensus 29 ~~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~ 67 (230)
T TIGR03707 29 GARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPK 67 (230)
T ss_pred CCCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCC
Confidence 4588999997654 3346678899999999999999773
No 294
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=46.09 E-value=32 Score=24.79 Aligned_cols=32 Identities=31% Similarity=0.356 Sum_probs=24.7
Q ss_pred HHHHHHHHhcCCCeEEEEEEeccHHHHHHhcc
Q 030535 112 KSVIAALKSKGVSAIGAAGFCWGGVVAAKLAS 143 (175)
Q Consensus 112 ~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a~ 143 (175)
..+++.+.+++..-=.+.|-|.|+.++..++.
T Consensus 16 ~Gvl~~L~e~g~~~d~i~GtSaGAi~aa~~a~ 47 (175)
T cd07228 16 IGVLRALEEEGIEIDIIAGSSIGALVGALYAA 47 (175)
T ss_pred HHHHHHHHHCCCCeeEEEEeCHHHHHHHHHHc
Confidence 34566777776655688999999999998774
No 295
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=46.03 E-value=30 Score=30.09 Aligned_cols=19 Identities=26% Similarity=0.440 Sum_probs=17.2
Q ss_pred CCCeEEEEEEeccHHHHHH
Q 030535 122 GVSAIGAAGFCWGGVVAAK 140 (175)
Q Consensus 122 ~~~~i~v~G~S~GG~ia~~ 140 (175)
|..+|.++|||.|+++.+.
T Consensus 445 G~RPVTLVGFSLGARvIf~ 463 (633)
T KOG2385|consen 445 GNRPVTLVGFSLGARVIFE 463 (633)
T ss_pred CCCceeEeeeccchHHHHH
Confidence 6779999999999999885
No 296
>COG0084 TatD Mg-dependent DNase [DNA replication, recombination, and repair]
Probab=45.34 E-value=55 Score=25.63 Aligned_cols=51 Identities=29% Similarity=0.249 Sum_probs=42.9
Q ss_pred chhHHHHHHHHHHhcCCCeEEEEEEeccHHH-HHHhcc-CCCccEEEEecCCC
Q 030535 107 GYVDAKSVIAALKSKGVSAIGAAGFCWGGVV-AAKLAS-SHDIQAAVVLHPGA 157 (175)
Q Consensus 107 ~~~d~~~~~~~l~~~~~~~i~v~G~S~GG~i-a~~~a~-~~~v~~~v~~~p~~ 157 (175)
...|...+++..++.+..++.++|.+....- ++.+|. .+.+-+.+.+||.-
T Consensus 15 ~~~d~~~vi~~a~~~gv~~~~~~g~~~~~~~~~~~la~~y~~v~~~~G~HP~~ 67 (256)
T COG0084 15 FDEDRDEVIARAREAGVKKMVVVGTDLEDFKRALELAEKYPNVYAAVGVHPLD 67 (256)
T ss_pred hcCCHHHHHHHHHHcCCcEEEEeecCHHHHHHHHHHHHhCCCeEEEEeeCCCc
Confidence 3478888999998888999999999998877 555774 47899999999987
No 297
>cd08193 HVD 5-hydroxyvalerate dehydrogenase (HVD) catalyzes the oxidation of 5-hydroxyvalerate to 5-oxovalerate with NAD+ as cofactor. 5-hydroxyvalerate dehydrogenase (HVD) is an iron-containing (type III) NAD-dependent alcohol dehydrogenase. It plays a role in the cyclopentanol metabolism biochemical pathway. It catalyzes the oxidation of 5-hydroxyvalerate to 5-oxovalerate with NAD+ as cofactor. This cyclopentanol (cpn) degradation pathway is present in some bacteria which can use cyclopentanol as sole carbon source. In Comamonas sp. strain NCIMB 9872, this enzyme is encoded by the CpnD gene.
Probab=45.24 E-value=1.3e+02 Score=24.59 Aligned_cols=63 Identities=21% Similarity=0.219 Sum_probs=38.7
Q ss_pred EEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcCCC
Q 030535 45 AILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVS 124 (175)
Q Consensus 45 ~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~ 124 (175)
.++++.+..-.....+..+.+.|.+.|..+..+|-...++. .+++..+++.+++.+.+
T Consensus 28 ~~livt~~~~~~~~~~~~v~~~L~~~~~~~~~~~~v~~~p~----------------------~~~v~~~~~~~~~~~~D 85 (376)
T cd08193 28 RVLVVTDPGILKAGLIDPLLASLEAAGIEVTVFDDVEADPP----------------------EAVVEAAVEAARAAGAD 85 (376)
T ss_pred eEEEEcCcchhhCccHHHHHHHHHHcCCeEEEECCCCCCcC----------------------HHHHHHHHHHHHhcCCC
Confidence 35556544322334567888889888988877663222222 16678888888887777
Q ss_pred eEEEE
Q 030535 125 AIGAA 129 (175)
Q Consensus 125 ~i~v~ 129 (175)
-|.-+
T Consensus 86 ~IIai 90 (376)
T cd08193 86 GVIGF 90 (376)
T ss_pred EEEEe
Confidence 44433
No 298
>PF13200 DUF4015: Putative glycosyl hydrolase domain
Probab=44.91 E-value=55 Score=26.53 Aligned_cols=79 Identities=19% Similarity=0.179 Sum_probs=46.4
Q ss_pred EEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC--CCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcCC-
Q 030535 47 LLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF--YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGV- 123 (175)
Q Consensus 47 v~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~- 123 (175)
|.+.+....+...+..+.+.+.+.+.+.+++|.- .|.-. ... +... ..........+.|+..+++.++++|+
T Consensus 2 iYlt~~~a~~~~~~~~~~~~i~~t~lNavVIDvKdd~G~i~--y~s-~~~~--~~~~ga~~~~i~D~~~l~~~l~e~gIY 76 (316)
T PF13200_consen 2 IYLTAYSAGSPERLDKLLDLIKRTELNAVVIDVKDDDGNIT--YDS-QVPL--AREIGAVKPYIKDLKALVKKLKEHGIY 76 (316)
T ss_pred EEechhhcCCHHHHHHHHHHHHhcCCceEEEEEecCCceEE--ecC-CCch--hhhcccccccccCHHHHHHHHHHCCCE
Confidence 3444333333356888999888889999999985 34311 111 0011 11112222335899999999999863
Q ss_pred --CeEEEEE
Q 030535 124 --SAIGAAG 130 (175)
Q Consensus 124 --~~i~v~G 130 (175)
.||.++=
T Consensus 77 ~IARIv~Fk 85 (316)
T PF13200_consen 77 PIARIVVFK 85 (316)
T ss_pred EEEEEEEec
Confidence 4555554
No 299
>COG3233 Predicted deacetylase [General function prediction only]
Probab=44.53 E-value=1.1e+02 Score=23.50 Aligned_cols=40 Identities=20% Similarity=0.252 Sum_probs=25.4
Q ss_pred eEEEEecCCCCCCcchHHHHHHHHHhCCC---E--EEeccCCCCC
Q 030535 44 SAILLISDVFGYEAPLFRKLADKVAGAGF---L--VVAPDFFYGD 83 (175)
Q Consensus 44 ~~vv~lhg~~g~~~~~~~~~a~~la~~G~---~--vi~~D~~~g~ 83 (175)
+.++++|.-.+..++....+.+.+.+.++ . .++||+..+.
T Consensus 4 ~~iillhdVSpv~~~~~~~i~~~ide~~~~~~t~lLViPn~~~~~ 48 (233)
T COG3233 4 PLIILLHDVSPVYWPTLSNIDAAIDEYGAQNSTVLLVIPNHANDY 48 (233)
T ss_pred cceEEEEecCcccchhHHHHHHHHHHhCCCCceEEEEeeccCCCC
Confidence 36888998777666666666666655543 3 5777764443
No 300
>PRK09860 putative alcohol dehydrogenase; Provisional
Probab=44.49 E-value=1.7e+02 Score=24.22 Aligned_cols=63 Identities=11% Similarity=0.105 Sum_probs=39.6
Q ss_pred EEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcCCC
Q 030535 45 AILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVS 124 (175)
Q Consensus 45 ~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~ 124 (175)
.++++.+..-.....+..+.+.|.+.|..+..+|--..+|. .+++..+++.+++.+.+
T Consensus 33 ~~livt~~~~~~~g~~~~v~~~L~~~~i~~~~f~~v~~np~----------------------~~~v~~~~~~~~~~~~D 90 (383)
T PRK09860 33 RTLIVTDNMLTKLGMAGDVQKALEERNIFSVIYDGTQPNPT----------------------TENVAAGLKLLKENNCD 90 (383)
T ss_pred EEEEEcCcchhhCccHHHHHHHHHHcCCeEEEeCCCCCCcC----------------------HHHHHHHHHHHHHcCCC
Confidence 35555543222235677888999888988888772222222 16688888888888777
Q ss_pred eEEEE
Q 030535 125 AIGAA 129 (175)
Q Consensus 125 ~i~v~ 129 (175)
-|.-+
T Consensus 91 ~Iiai 95 (383)
T PRK09860 91 SVISL 95 (383)
T ss_pred EEEEe
Confidence 44433
No 301
>PRK09271 flavodoxin; Provisional
Probab=44.39 E-value=1.1e+02 Score=21.74 Aligned_cols=90 Identities=17% Similarity=0.165 Sum_probs=44.0
Q ss_pred EEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCCCCCCCCCCCC-chhhHHHHHHh--cCCCcchhHHHHHHHHHHhc
Q 030535 45 AILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNN-PQFDREAWRKI--HNTDKGYVDAKSVIAALKSK 121 (175)
Q Consensus 45 ~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~-~~~~~~~~~~~--~~~~~~~~d~~~~~~~l~~~ 121 (175)
.+|+....+|.+......+++.|.+.|+.+-..+............ .+.+.- .+.. ...-..-+.+..+++.+.+.
T Consensus 3 v~IvY~S~tGnTe~~A~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~d~v-ilgt~T~~~G~~p~~~~~f~~~l~~~ 81 (160)
T PRK09271 3 ILLAYASLSGNTREVAREIEERCEEAGHEVDWVETDVQTLAEYPLDPEDYDLY-LLGTWTDNAGRTPPEMKRFIAELAET 81 (160)
T ss_pred EEEEEEcCCchHHHHHHHHHHHHHhCCCeeEEEecccccccccccCcccCCEE-EEECcccCCCcCCHHHHHHHHHHHHH
Confidence 3444444667665556667888888898876655431110000000 000000 0000 00011113467777777653
Q ss_pred --CCCeEEEEEE---eccH
Q 030535 122 --GVSAIGAAGF---CWGG 135 (175)
Q Consensus 122 --~~~~i~v~G~---S~GG 135 (175)
...+++++|- +||+
T Consensus 82 ~~~~k~~avfgsgd~~~~~ 100 (160)
T PRK09271 82 IGKPPNVAVFGTGETQWGE 100 (160)
T ss_pred hccCCeEEEEecCCCCcCc
Confidence 2347999998 6877
No 302
>cd08190 HOT Hydroxyacid-oxoacid transhydrogenase (HOT) involved in gamma-hydroxybutyrate metabolism. Hydroxyacid-oxoacid transhydrogenase (HOT), also known as D-2-hydroxyglutarate transhydrogenase. It catalyzes the conversion of gamma-hydroxybutyrate (GHB) to succinic semialdehyde (SSA), coupled to the stoichiometric conversion of alpha-ketoglutarate to D-2-hydroxyglutarate in gamma-Hydroxybutyrate catabolism. Unlike many other alcohols, which are oxidized by NAD-linked dehydrogenases, gamma-hydroxybutyrate is metabolized to succinate semialdehyde by hydroxyacid-oxoacid transhydrogenase which does not require free NAD or NADP, but instead using alpha -ketoglutarate as an acceptor, converting it to d-2-hydroxyglutarate. Alpha-ketoglutarate serves as an intermediate acceptor to regenerate NAD(P) required for the oxidation of GHB. HOT also catalyzes the reversible oxidation of a hydroxyacid obligatorily coupled to the reduction of an oxoacid, and requires no cofactor. In mammals, the HOT
Probab=44.26 E-value=1.6e+02 Score=24.61 Aligned_cols=60 Identities=22% Similarity=0.168 Sum_probs=38.1
Q ss_pred EEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcCCC
Q 030535 45 AILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVS 124 (175)
Q Consensus 45 ~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~ 124 (175)
.++++.+..-.....+..+.+.|.+.|+.+..+|-...+|. .+.+..+++.+++.+.+
T Consensus 25 ~vlivt~~~~~~~g~~~~v~~~L~~~gi~~~~f~~v~~~p~----------------------~~~v~~~~~~~~~~~~D 82 (414)
T cd08190 25 RVCLVTDPNLAQLPPVKVVLDSLEAAGINFEVYDDVRVEPT----------------------DESFKDAIAFAKKGQFD 82 (414)
T ss_pred eEEEEECcchhhcchHHHHHHHHHHcCCcEEEeCCCCCCcC----------------------HHHHHHHHHHHHhcCCC
Confidence 35556544333334567788889888998888773222222 15678888888887777
Q ss_pred eE
Q 030535 125 AI 126 (175)
Q Consensus 125 ~i 126 (175)
-|
T Consensus 83 ~I 84 (414)
T cd08190 83 AF 84 (414)
T ss_pred EE
Confidence 43
No 303
>TIGR02638 lactal_redase lactaldehyde reductase. This clade of genes encoding iron-containing alcohol dehydrogenase (pfam00465) proteins is generally found in apparent operons for the catabolism of rhamnose or fucose. Catabolism of both of these monosaccharides results in lactaldehyde which is reduced by this enzyme to 1,2 propanediol. This protein is alternatively known by the name 1,2 propanediol oxidoreductase. This enzyme is active under anaerobic conditions in E. coli while being inactivated by reactive oxygen species under aerobic conditions. Under aerobic conditions the lactaldehyde product of rhamnose and fucose catabolism is believed to be oxidized to lactate by a separate enzyme, lactaldehyde dehydrogenase.
Probab=44.25 E-value=1.4e+02 Score=24.61 Aligned_cols=70 Identities=21% Similarity=0.194 Sum_probs=41.5
Q ss_pred EEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcCCC
Q 030535 45 AILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVS 124 (175)
Q Consensus 45 ~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~ 124 (175)
.++++.+..-.....+..+.+.|.+.|+.+..+|--..++. .+++..+++.+++.+.+
T Consensus 31 r~lvvt~~~~~~~g~~~~v~~~L~~~~i~~~~~~~v~~~p~----------------------~~~v~~~~~~~~~~~~D 88 (379)
T TIGR02638 31 KALVVTDKDLIKFGVADKVTDLLDEAGIAYELFDEVKPNPT----------------------ITVVKAGVAAFKASGAD 88 (379)
T ss_pred EEEEEcCcchhhccchHHHHHHHHHCCCeEEEECCCCCCcC----------------------HHHHHHHHHHHHhcCCC
Confidence 35666654333323567788889888988877662111111 16678888888887777
Q ss_pred eEEEEEEeccHHHHHH
Q 030535 125 AIGAAGFCWGGVVAAK 140 (175)
Q Consensus 125 ~i~v~G~S~GG~ia~~ 140 (175)
- |+|. ||+-++-
T Consensus 89 ~--Iiai--GGGSviD 100 (379)
T TIGR02638 89 Y--LIAI--GGGSPID 100 (379)
T ss_pred E--EEEe--CChHHHH
Confidence 4 4443 4444443
No 304
>cd03131 GATase1_HTS Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). HTS, the first enzyme in methionine biosynthesis in Escherichia coli, transfers a succinyl group from succinyl-CoA to homoserine forming succinyl homoserine. It has been suggested that the succinyl group of succinyl-CoA is initially transferred to an enzyme nucleophile before subsequent transfer to homoserine. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with GATase1 domains a reactive cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. It has been proposed that this cys is in the active site of the molecule. However, as succinyl has been found bound to a conserved lysine residue, this conserved cys may play a role in dimer formation. HTS acti
Probab=44.04 E-value=7.8 Score=28.53 Aligned_cols=31 Identities=13% Similarity=0.244 Sum_probs=26.3
Q ss_pred hHHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhc
Q 030535 109 VDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLA 142 (175)
Q Consensus 109 ~d~~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a 142 (175)
+.+..+++|.+++ -...+|.|||+..++.+.
T Consensus 85 ~El~~i~dwa~~~---v~stl~iCWgaqaal~~~ 115 (175)
T cd03131 85 EELTEILDWAKTH---VTSTLFSCWAAMAALYYF 115 (175)
T ss_pred HHHHHHHHHHHHh---CcchHHHHHHHHHHHHHH
Confidence 5689999999976 357899999999999865
No 305
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=43.99 E-value=26 Score=24.15 Aligned_cols=22 Identities=36% Similarity=0.567 Sum_probs=19.4
Q ss_pred hHHHHHHHHHhCCCEEEeccCC
Q 030535 59 LFRKLADKVAGAGFLVVAPDFF 80 (175)
Q Consensus 59 ~~~~~a~~la~~G~~vi~~D~~ 80 (175)
.+-++|+.|+++||.+++.|.-
T Consensus 24 ~~~~VA~~L~e~g~dv~atDI~ 45 (129)
T COG1255 24 FFLDVAKRLAERGFDVLATDIN 45 (129)
T ss_pred hHHHHHHHHHHcCCcEEEEecc
Confidence 4568999999999999999964
No 306
>PF04084 ORC2: Origin recognition complex subunit 2 ; InterPro: IPR007220 The Origin Recognition Complex (ORC) is a six-subunit ATP-dependent DNA-binding complex encoded in yeast by ORC1-6 []. ORC is a central component for eukaryotic DNA replication, and binds chromatin at replication origins throughout the cell cycle []. ORC directs DNA replication throughout the genome and is required for its initiation [, , ]. ORC bound at replication origins serves as the foundation for assembly of the pre-replicative complex (pre-RC), which includes Cdc6, Tah11 (aka Cdt1), and the Mcm2-7 complex [, , ]. Pre-RC assembly during G1 is required for replication licensing of chromosomes prior to DNA synthesis during S phase [, , ]. Cell cycle-regulated phosphorylation of Orc2, Orc6, Cdc6, and MCM by the cyclin-dependent protein kinase Cdc28 regulates initiation of DNA replication, including blocking reinitiation in G2/M phase [, , , ]. In yeast, ORC also plays a role in the establishment of silencing at the mating-type loci Hidden MAT Left (HML) and Hidden MAT Right (HMR) [, , ]. ORC participates in the assembly of transcriptionally silent chromatin at HML and HMR by recruiting the Sir1 silencing protein to the HML and HMR silencers [, , ]. Both Orc1 and Orc5 bind ATP, though only Orc1 has ATPase activity []. The binding of ATP by Orc1 is required for ORC binding to DNA and is essential for cell viability []. The ATPase activity of Orc1 is involved in formation of the pre-RC [, , ]. ATP binding by Orc5 is crucial for the stability of ORC as a whole. Only the Orc1-5 subunits are required for origin binding; Orc6 is essential for maintenance of pre-RCs once formed []. Interactions within ORC suggest that Orc2-3-6 may form a core complex []. ORC homologues have been found in various eukaryotes, including fission yeast, insects, amphibians, and humans []. This entry represents subunit 2, which binds the origin of replication. It plays a role in chromosome replication and mating type transcriptional silencing.; GO: 0006260 DNA replication, 0000808 origin recognition complex, 0005634 nucleus
Probab=43.92 E-value=1.8e+02 Score=23.69 Aligned_cols=88 Identities=15% Similarity=0.022 Sum_probs=51.8
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCC--CEEEeccCC-CCCCCCCCCCchhhHHHHHHh---cCCCcchhHHHHHHHHHH
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAG--FLVVAPDFF-YGDPIVDLNNPQFDREAWRKI---HNTDKGYVDAKSVIAALK 119 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G--~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~~~~~~l~ 119 (175)
-|+++ |+|+....+..+++.+.... ..|++.+-+ .+-. ..+.-..+...+.. .......+.+..+++.+.
T Consensus 56 nlL~Y-G~GSKr~lL~~Fa~~~l~~~~~~~~vvvnGy~p~~~---~k~il~~I~~~l~~~~~~~~~~~~~~~~~i~~~l~ 131 (326)
T PF04084_consen 56 NLLFY-GYGSKRKLLNDFAEKYLSDWGDGPVVVVNGYFPSLS---IKDILNTIEEALLPEPSKKPKSPSEQLDFIISYLE 131 (326)
T ss_pred eEEEE-ecChHHHHHHHHHHHHhhccCCCcEEEEEccCCCCc---HHHHHHHHHHHHhhhcccccCCHHHHHHHHHHHHh
Confidence 46777 77888888899999887763 666666633 1111 11101111111111 122344456677788887
Q ss_pred hcC-CCeEEEEEEeccHHH
Q 030535 120 SKG-VSAIGAAGFCWGGVV 137 (175)
Q Consensus 120 ~~~-~~~i~v~G~S~GG~i 137 (175)
+.. ..++.++=|+.=|..
T Consensus 132 ~~~~~~~l~lvIHnIDg~~ 150 (326)
T PF04084_consen 132 SRPSPPPLYLVIHNIDGPS 150 (326)
T ss_pred ccCCCCceEEEEECCCChh
Confidence 764 568999999986654
No 307
>cd08185 Fe-ADH1 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenases-like (ADH). Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions. The protein structure represents a dehydroquinate synthase fold and is a member of the iron-containing alcohol dehydrogenase-like family. They are distinct from other alcohol dehydrogenases which contain different protein domains. Proteins of this family have not been characterized. Their specific function is unknown. They are present in bacteria and archaea.
Probab=43.86 E-value=1.7e+02 Score=24.03 Aligned_cols=64 Identities=16% Similarity=0.164 Sum_probs=41.1
Q ss_pred EEEEecCCCC-CCcchHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcCC
Q 030535 45 AILLISDVFG-YEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGV 123 (175)
Q Consensus 45 ~vv~lhg~~g-~~~~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~ 123 (175)
-++++++... .....+..+.+.|.+.|..+..+|-...+|. .+++..+++.+++.+.
T Consensus 27 r~livt~~~~~~~~g~~~~v~~~L~~~~~~~~~~~~v~~~p~----------------------~~~v~~~~~~~~~~~~ 84 (380)
T cd08185 27 KALIVTGNGSSKKTGYLDRVIELLKQAGVEVVVFDKVEPNPT----------------------TTTVMEGAALAREEGC 84 (380)
T ss_pred eEEEEeCCCchhhccHHHHHHHHHHHcCCeEEEeCCccCCCC----------------------HHHHHHHHHHHHHcCC
Confidence 4666775443 1335677888899888998887762222222 1667888888888777
Q ss_pred CeEEEEE
Q 030535 124 SAIGAAG 130 (175)
Q Consensus 124 ~~i~v~G 130 (175)
+-|.-+|
T Consensus 85 D~IiavG 91 (380)
T cd08185 85 DFVVGLG 91 (380)
T ss_pred CEEEEeC
Confidence 7544443
No 308
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=43.23 E-value=54 Score=20.77 Aligned_cols=34 Identities=24% Similarity=0.269 Sum_probs=25.1
Q ss_pred hHHHHHHHHHHhc----CCCeEEEEEEeccHHHHHHhc
Q 030535 109 VDAKSVIAALKSK----GVSAIGAAGFCWGGVVAAKLA 142 (175)
Q Consensus 109 ~d~~~~~~~l~~~----~~~~i~v~G~S~GG~ia~~~a 142 (175)
..+..-+++++++ +.+++-|+|-|-|=.++.+.+
T Consensus 21 ~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa 58 (78)
T PF12242_consen 21 RNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIA 58 (78)
T ss_dssp HHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHH
Confidence 5577778888874 567999999999888887754
No 309
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=42.94 E-value=28 Score=26.88 Aligned_cols=32 Identities=31% Similarity=0.303 Sum_probs=24.4
Q ss_pred HHHHHHHHhcCCC---eE-EEEEEeccHHHHHHhcc
Q 030535 112 KSVIAALKSKGVS---AI-GAAGFCWGGVVAAKLAS 143 (175)
Q Consensus 112 ~~~~~~l~~~~~~---~i-~v~G~S~GG~ia~~~a~ 143 (175)
..+++.|.+++.. ++ .+.|-|.|+.++..++.
T Consensus 15 iGVl~~L~e~g~~l~~~~~~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 15 LGAAKALLRHGKKLLKRVKRFAGASAGSLVAAVLLT 50 (246)
T ss_pred HHHHHHHHHcCchhhccCCEEEEECHHHHHHHHHhc
Confidence 3567777777643 33 79999999999999874
No 310
>PLN03050 pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional
Probab=42.90 E-value=53 Score=25.51 Aligned_cols=33 Identities=21% Similarity=0.073 Sum_probs=24.6
Q ss_pred EEEEecCCCCCCcchHHHHHHHHHhCCCEEEecc
Q 030535 45 AILLISDVFGYEAPLFRKLADKVAGAGFLVVAPD 78 (175)
Q Consensus 45 ~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D 78 (175)
.|+++- |.|++...-...|++|.++||.|.++-
T Consensus 62 ~V~Vlc-G~GNNGGDGlv~AR~L~~~G~~V~v~~ 94 (246)
T PLN03050 62 RVLLVC-GPGNNGGDGLVAARHLAHFGYEVTVCY 94 (246)
T ss_pred eEEEEE-CCCCCchhHHHHHHHHHHCCCeEEEEE
Confidence 466776 556665666678999999999887754
No 311
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=42.38 E-value=19 Score=24.48 Aligned_cols=32 Identities=22% Similarity=0.107 Sum_probs=20.9
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEec
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAP 77 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~ 77 (175)
|++.-++.+.+..-+..+++.|.++|+.|...
T Consensus 1 Ili~~~Gt~Ghv~P~lala~~L~~rGh~V~~~ 32 (139)
T PF03033_consen 1 ILIATGGTRGHVYPFLALARALRRRGHEVRLA 32 (139)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHTT-EEEEE
T ss_pred CEEEEcCChhHHHHHHHHHHHHhccCCeEEEe
Confidence 34444455444455778999999999988643
No 312
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=42.14 E-value=51 Score=20.29 Aligned_cols=32 Identities=16% Similarity=0.148 Sum_probs=19.1
Q ss_pred CeEEEEecCCCCCCcchHHHHHHHHHh-CCCEEEec
Q 030535 43 KSAILLISDVFGYEAPLFRKLADKVAG-AGFLVVAP 77 (175)
Q Consensus 43 ~~~vv~lhg~~g~~~~~~~~~a~~la~-~G~~vi~~ 77 (175)
.|.++++||+-. . -...+|+.+|+ +|+.++++
T Consensus 31 ~~~~~lvhGga~-~--GaD~iA~~wA~~~gv~~~~~ 63 (71)
T PF10686_consen 31 HPDMVLVHGGAP-K--GADRIAARWARERGVPVIRF 63 (71)
T ss_pred CCCEEEEECCCC-C--CHHHHHHHHHHHCCCeeEEe
Confidence 366888886642 1 23456666655 47766654
No 313
>PRK10624 L-1,2-propanediol oxidoreductase; Provisional
Probab=42.10 E-value=1.6e+02 Score=24.29 Aligned_cols=70 Identities=19% Similarity=0.202 Sum_probs=41.7
Q ss_pred EEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcCCC
Q 030535 45 AILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVS 124 (175)
Q Consensus 45 ~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~ 124 (175)
.++++.+..-.+...+..+.+.|.+.|+.+..+|-...+|. .+++..+++.+++.+.+
T Consensus 32 ~~lvvtd~~~~~~g~~~~v~~~L~~~g~~~~~~~~v~~~p~----------------------~~~v~~~~~~~~~~~~D 89 (382)
T PRK10624 32 KALIVTDKTLVKCGVVAKVTDVLDAAGLAYEIYDGVKPNPT----------------------IEVVKEGVEVFKASGAD 89 (382)
T ss_pred EEEEEeCcchhhCcchHHHHHHHHHCCCeEEEeCCCCCCcC----------------------HHHHHHHHHHHHhcCCC
Confidence 35556644323324567788889888988877762111221 16678888888887777
Q ss_pred eEEEEEEeccHHHHHH
Q 030535 125 AIGAAGFCWGGVVAAK 140 (175)
Q Consensus 125 ~i~v~G~S~GG~ia~~ 140 (175)
.|+|. ||+-++-
T Consensus 90 --~IIai--GGGS~iD 101 (382)
T PRK10624 90 --YLIAI--GGGSPQD 101 (382)
T ss_pred --EEEEe--CChHHHH
Confidence 44443 4444443
No 314
>PF00465 Fe-ADH: Iron-containing alcohol dehydrogenase ; InterPro: IPR001670 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of ethanol to acetaldehyde with the concomitant reduction of NAD. Currently three, structurally and catalytically, different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Iron-containing ADH's have been found in yeast (gene ADH4) [], as well as in Zymomonas mobilis (gene adhB) []. These two iron-containing ADH's are closely related to the following enzymes: Escherichia coli propanediol oxidoreductase (1.1.1.77 from EC) (gene fucO) [], an enzyme involved in the metabolism of fucose and which also seems to contain ferrous ion(s). Clostridium acetobutylicum NADPH- and NADH-dependent butanol dehydrogenases (1.1.1 from EC) (genes adh1, bdhA and bdhB) [], an enzyme which has activity using butanol and ethanol as substrates. E. coli adhE [], an iron-dependent enzyme which harbor three different activities: alcohol dehydrogenase, acetaldehyde dehydrogenase (acetylating) (1.2.1.10 from EC) and pyruvate-formate-lyase deactivase. Bacterial glycerol dehydrogenase (1.1.1.6 from EC) (gene gldA or dhaD) []. Clostridium kluyveri NAD-dependent 4-hydroxybutyrate dehydrogenase (4hbd) (1.1.1.61 from EC). Citrobacter freundii and Klebsiella pneumoniae 1,3-propanediol dehydrogenase (1.1.1.202 from EC) (gene dhaT). Bacillus methanolicus NAD-dependent methanol dehydrogenase (1.1.1.244 from EC) []. E. coli and Salmonella typhimurium ethanolamine utilization protein eutG. E. coli hypothetical protein yiaY. ; GO: 0016491 oxidoreductase activity, 0046872 metal ion binding, 0055114 oxidation-reduction process; PDB: 1RRM_A 2BL4_A 2BI4_A 3BFJ_R 1KQ3_A 1JQ5_A 1JPU_A 1JQA_A 3JZD_A 3UHJ_A ....
Probab=41.90 E-value=50 Score=26.95 Aligned_cols=63 Identities=21% Similarity=0.204 Sum_probs=41.2
Q ss_pred EEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcCCC
Q 030535 45 AILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVS 124 (175)
Q Consensus 45 ~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~ 124 (175)
-++++.+..-.....+..+...|.+.|..+..++-..+.+. .++++.+++.+++.+.+
T Consensus 23 r~lvVt~~~~~~~~~~~~v~~~L~~~~i~~~~~~~~~~~p~----------------------~~~v~~~~~~~~~~~~D 80 (366)
T PF00465_consen 23 RVLVVTDPSLSKSGLVDRVLDALEEAGIEVQVFDGVGPNPT----------------------LEDVDEAAEQARKFGAD 80 (366)
T ss_dssp EEEEEEEHHHHHHTHHHHHHHHHHHTTCEEEEEEEESSS-B----------------------HHHHHHHHHHHHHTTSS
T ss_pred CEEEEECchHHhCccHHHHHHHHhhCceEEEEEecCCCCCc----------------------HHHHHHHHHHHHhcCCC
Confidence 34555544212123567788889899999999884333333 17789999999988888
Q ss_pred eEEEE
Q 030535 125 AIGAA 129 (175)
Q Consensus 125 ~i~v~ 129 (175)
-|..+
T Consensus 81 ~IIai 85 (366)
T PF00465_consen 81 CIIAI 85 (366)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 44444
No 315
>PF02698 DUF218: DUF218 domain; InterPro: IPR003848 This domain of unknown function is found in several uncharacterised proteins.; PDB: 3CA8_A.
Probab=41.83 E-value=75 Score=22.12 Aligned_cols=34 Identities=18% Similarity=0.008 Sum_probs=22.3
Q ss_pred hHHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhc
Q 030535 109 VDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLA 142 (175)
Q Consensus 109 ~d~~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a 142 (175)
+.+..+.+++++.+..++.|+-..+=-.=+..+.
T Consensus 84 ena~~~~~~~~~~~~~~iilVT~~~H~~Ra~~~~ 117 (155)
T PF02698_consen 84 ENARFSKRLLKERGWQSIILVTSPYHMRRARMIF 117 (155)
T ss_dssp HHHHHHHHHHHT-SSS-EEEE--CCCHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCeEEEECCHHHHHHHHHHH
Confidence 6677888889888888999999988555555444
No 316
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=41.42 E-value=18 Score=26.52 Aligned_cols=40 Identities=18% Similarity=0.246 Sum_probs=32.8
Q ss_pred eEEEEEEeccHHHHHHhccCCCccEEEEecCCCCCccccc
Q 030535 125 AIGAAGFCWGGVVAAKLASSHDIQAAVVLHPGAITVDDIN 164 (175)
Q Consensus 125 ~i~v~G~S~GG~ia~~~a~~~~v~~~v~~~p~~~~~~~~~ 164 (175)
.|.++.+|||=.+|-++...-+++..+++++...+-++-.
T Consensus 58 hirlvAwSMGVwvAeR~lqg~~lksatAiNGTgLpcDds~ 97 (214)
T COG2830 58 HIRLVAWSMGVWVAERVLQGIRLKSATAINGTGLPCDDSF 97 (214)
T ss_pred hhhhhhhhHHHHHHHHHHhhccccceeeecCCCCCccccC
Confidence 6789999999999999877778888888998887655433
No 317
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=40.36 E-value=1.6e+02 Score=23.93 Aligned_cols=100 Identities=15% Similarity=0.154 Sum_probs=53.1
Q ss_pred EEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcCCC-
Q 030535 47 LLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVS- 124 (175)
Q Consensus 47 v~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~- 124 (175)
|++-||-|.-. ...+..|.+.||.|+++|.. .|... ...+....-..--+.|-...-+.+.++.++
T Consensus 3 iLVtGGAGYIG---SHtv~~Ll~~G~~vvV~DNL~~g~~~---------~v~~~~~~f~~gDi~D~~~L~~vf~~~~ida 70 (329)
T COG1087 3 VLVTGGAGYIG---SHTVRQLLKTGHEVVVLDNLSNGHKI---------ALLKLQFKFYEGDLLDRALLTAVFEENKIDA 70 (329)
T ss_pred EEEecCcchhH---HHHHHHHHHCCCeEEEEecCCCCCHH---------HhhhccCceEEeccccHHHHHHHHHhcCCCE
Confidence 45566776532 24577788899999999965 44322 111110000111113334444445454332
Q ss_pred -----eEEEEEEec-----------cHHHHHH-hccCCCccEEEEecCCCC
Q 030535 125 -----AIGAAGFCW-----------GGVVAAK-LASSHDIQAAVVLHPGAI 158 (175)
Q Consensus 125 -----~i~v~G~S~-----------GG~ia~~-~a~~~~v~~~v~~~p~~~ 158 (175)
-...+|-|+ +|.+.+. .+.+..|+.+|..+.+..
T Consensus 71 ViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAav 121 (329)
T COG1087 71 VVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAV 121 (329)
T ss_pred EEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhh
Confidence 233456665 5555554 555667888887665544
No 318
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=40.19 E-value=37 Score=24.37 Aligned_cols=21 Identities=29% Similarity=0.314 Sum_probs=17.4
Q ss_pred hHHHHHHHHHhCCCEEEeccC
Q 030535 59 LFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 59 ~~~~~a~~la~~G~~vi~~D~ 79 (175)
.-..+|..|+++|+.|+.+|.
T Consensus 15 ~a~~la~~la~~g~~VlliD~ 35 (195)
T PF01656_consen 15 IAANLAQALARKGKKVLLIDL 35 (195)
T ss_dssp HHHHHHHHHHHTTS-EEEEEE
T ss_pred HHHHHHhcccccccccccccc
Confidence 446689999999999999997
No 319
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=39.96 E-value=1.1e+02 Score=20.26 Aligned_cols=20 Identities=25% Similarity=0.210 Sum_probs=15.2
Q ss_pred hHHHHHHHHHhCCCEEEecc
Q 030535 59 LFRKLADKVAGAGFLVVAPD 78 (175)
Q Consensus 59 ~~~~~a~~la~~G~~vi~~D 78 (175)
....++..|..+||.|+-..
T Consensus 15 G~~~~~~~l~~~G~~V~~lg 34 (119)
T cd02067 15 GKNIVARALRDAGFEVIDLG 34 (119)
T ss_pred HHHHHHHHHHHCCCEEEECC
Confidence 35678888888999995544
No 320
>PF01872 RibD_C: RibD C-terminal domain; InterPro: IPR002734 This domain is found in the C terminus of the bifunctional deaminase-reductase of Escherichia coli, Bacillus subtilis and other bacteria in combination with IPR002125 from INTERPRO that catalyses the second and third steps in the biosynthesis of riboflavin, i.e., the deamination of 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (deaminase) and the subsequent reduction of the ribosyl side chain (reductase) []. The domain is also present in some HTP reductases from archaea and fungi.; GO: 0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity, 0009231 riboflavin biosynthetic process, 0055114 oxidation-reduction process; PDB: 3KY8_B 3KGY_B 2GD9_B 3JTW_B 2XW7_B 2D5N_B 2B3Z_A 3EX8_B 2AZN_A 2P4G_A ....
Probab=39.68 E-value=1.1e+02 Score=22.42 Aligned_cols=48 Identities=21% Similarity=0.335 Sum_probs=32.0
Q ss_pred hhHHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhccCCCccEEE-EecCCCC
Q 030535 108 YVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSHDIQAAV-VLHPGAI 158 (175)
Q Consensus 108 ~~d~~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a~~~~v~~~v-~~~p~~~ 158 (175)
..|+..+++.|++++..+|.+.| ||.+...+.....|+-+. .++|...
T Consensus 120 ~~dl~~~l~~L~~~g~~~i~v~G---G~~l~~~~l~~gLvDEl~l~i~Pv~l 168 (200)
T PF01872_consen 120 RVDLEEALRRLKERGGKDILVEG---GGSLNGSFLRAGLVDELSLTIAPVLL 168 (200)
T ss_dssp SEHHHHHHHHHHHTTTSEEEEEE---HHHHHHHHHHTT--SEEEEEEESEE-
T ss_pred ecCHHHHHHHHHhcCCCEEEEec---hHHHHHHHHhCCCCCEEEEEEeeEEe
Confidence 35799999999999888999988 777777765544444433 3344433
No 321
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=39.49 E-value=30 Score=26.65 Aligned_cols=15 Identities=27% Similarity=0.341 Sum_probs=12.7
Q ss_pred CCCeEEEEEEeccHH
Q 030535 122 GVSAIGAAGFCWGGV 136 (175)
Q Consensus 122 ~~~~i~v~G~S~GG~ 136 (175)
+.+.|.++|||+|..
T Consensus 233 ~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEV 247 (270)
T ss_pred CCCEEEEEeCCCchh
Confidence 467999999999863
No 322
>cd08181 PPD-like 1,3-propanediol dehydrogenase-like (PPD). 1,3-propanediol dehydrogenase-like (PPD). This family is a member of the iron-containing alcohol dehydrogenase superfamily, and exhibits a dehydroquinate synthase-like fold. Protein sequence similarity search and other biochemical evidences suggest that they are close to the iron-containing 1,3-propanediol dehydrogenase (EC 1.1.1.202). 1,3-propanediol dehydrogenase catalyzes the oxidation of propane-1,3-diol to 3-hydroxypropanal with the simultaneous reduction of NADP+ to NADPH. The protein structure of Thermotoga maritima TM0920 gene contains one NADP+ and one iron ion.
Probab=39.01 E-value=1.9e+02 Score=23.52 Aligned_cols=63 Identities=8% Similarity=0.016 Sum_probs=38.9
Q ss_pred EEEEecCCCC-CCcchHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcCC
Q 030535 45 AILLISDVFG-YEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGV 123 (175)
Q Consensus 45 ~vv~lhg~~g-~~~~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~ 123 (175)
-++++.+... .....+..+.+.|.+.|..+..+|-...++. .+++..+++.+++.+.
T Consensus 27 r~lvVt~~~~~~~~g~~~~v~~~L~~~g~~~~~~~~v~~~p~----------------------~~~v~~~~~~~~~~~~ 84 (357)
T cd08181 27 RALIVTGKSSAKKNGSLDDVTKALEELGIEYEIFDEVEENPS----------------------LETIMEAVEIAKKFNA 84 (357)
T ss_pred EEEEEeCCchHhhcCcHHHHHHHHHHcCCeEEEeCCCCCCcC----------------------HHHHHHHHHHHHhcCC
Confidence 3555664433 2223457788889888988877763222222 1668888888888877
Q ss_pred CeEEEE
Q 030535 124 SAIGAA 129 (175)
Q Consensus 124 ~~i~v~ 129 (175)
+-|.-+
T Consensus 85 D~IIav 90 (357)
T cd08181 85 DFVIGI 90 (357)
T ss_pred CEEEEe
Confidence 744433
No 323
>cd01477 vWA_F09G8-8_type VWA F09G8.8 type: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of mo
Probab=38.84 E-value=1e+02 Score=22.86 Aligned_cols=37 Identities=14% Similarity=0.338 Sum_probs=25.4
Q ss_pred CeEEEEecCCCC-CCcchHHHHHHHHHhCCCEEEeccC
Q 030535 43 KSAILLISDVFG-YEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 43 ~~~vv~lhg~~g-~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
.+.||++-++.+ .........++.|.+.|+.++++=.
T Consensus 132 ~kvvIllTDg~~~~~~~~~~~~a~~l~~~GI~i~tVGi 169 (193)
T cd01477 132 KKVVIVFASDYNDEGSNDPRPIAARLKSTGIAIITVAF 169 (193)
T ss_pred CeEEEEEecCccCCCCCCHHHHHHHHHHCCCEEEEEEe
Confidence 456777764432 2213456789999999999999874
No 324
>COG3933 Transcriptional antiterminator [Transcription]
Probab=38.45 E-value=2.5e+02 Score=24.09 Aligned_cols=74 Identities=11% Similarity=0.057 Sum_probs=48.9
Q ss_pred CCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhc
Q 030535 42 SKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK 121 (175)
Q Consensus 42 ~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~ 121 (175)
.-.++|+.| |.... ..+..+|.+|-.. =-+.++|+|-..+. . +-+..+.++++++
T Consensus 108 ~v~vIiiAH-G~sTA-SSmaevanrLL~~-~~~~aiDMPLdvsp----------~------------~vle~l~e~~k~~ 162 (470)
T COG3933 108 RVKVIIIAH-GYSTA-SSMAEVANRLLGE-EIFIAIDMPLDVSP----------S------------DVLEKLKEYLKER 162 (470)
T ss_pred ceeEEEEec-CcchH-HHHHHHHHHHhhc-cceeeecCCCcCCH----------H------------HHHHHHHHHHHhc
Confidence 345677777 54432 5688999999887 45678898633221 0 3356777888887
Q ss_pred CCCeEEEEEEeccHHHHHH
Q 030535 122 GVSAIGAAGFCWGGVVAAK 140 (175)
Q Consensus 122 ~~~~i~v~G~S~GG~ia~~ 140 (175)
+..+=.++=-.||...++.
T Consensus 163 ~~~~GlllLVDMGSL~~f~ 181 (470)
T COG3933 163 DYRSGLLLLVDMGSLTSFG 181 (470)
T ss_pred CccCceEEEEecchHHHHH
Confidence 6555355567899888876
No 325
>PRK05782 bifunctional sirohydrochlorin cobalt chelatase/precorrin-8X methylmutase; Validated
Probab=38.43 E-value=2.2e+02 Score=23.37 Aligned_cols=27 Identities=11% Similarity=0.015 Sum_probs=15.8
Q ss_pred eEEEEecCCCCCC-cchHHHHHHHHHhC
Q 030535 44 SAILLISDVFGYE-APLFRKLADKVAGA 70 (175)
Q Consensus 44 ~~vv~lhg~~g~~-~~~~~~~a~~la~~ 70 (175)
..+|+-||..... ...+..+++.+.++
T Consensus 8 aiLLvgHGSRdp~~~~~~~~La~~l~~~ 35 (335)
T PRK05782 8 AIILIGHGSRRETFNSDMEGMANYLKEK 35 (335)
T ss_pred eEEEEecCCCChHHHHHHHHHHHHHHhc
Confidence 4566666554322 24567788888654
No 326
>TIGR02690 resist_ArsH arsenical resistance protein ArsH. Members of this protein family occur in arsenate resistance operons that include at least two different types of arsenate reductase. ArsH is not required for arsenate resistance in some systems. This family belongs to the larger family of NADPH-dependent FMN reductases (Pfam model pfam03358). The function of ArsH is not known.
Probab=38.24 E-value=1.2e+02 Score=23.08 Aligned_cols=28 Identities=14% Similarity=0.103 Sum_probs=18.8
Q ss_pred hHHHHHHHHHHhc-------CCCeEEEEEEeccHHH
Q 030535 109 VDAKSVIAALKSK-------GVSAIGAAGFCWGGVV 137 (175)
Q Consensus 109 ~d~~~~~~~l~~~-------~~~~i~v~G~S~GG~i 137 (175)
.-+..+++|+... ..++++++|.| ||..
T Consensus 107 g~LKNaiDwls~~~~~~~~~~~KpvaivgaS-gg~~ 141 (219)
T TIGR02690 107 GSQKDQIDWIPLSVGPVRPTQGKTLAVMQVS-GGSQ 141 (219)
T ss_pred HHHHHHHHhcccCcccccccCCCcEEEEEeC-CcHh
Confidence 3456788888652 13579999999 5544
No 327
>cd01450 vWFA_subfamily_ECM Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A
Probab=38.03 E-value=1.2e+02 Score=20.69 Aligned_cols=39 Identities=15% Similarity=0.176 Sum_probs=28.9
Q ss_pred CCCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 41 DSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 41 ~~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
...+.||++..|...........++.+.++|..++.+-.
T Consensus 102 ~~~~~iiliTDG~~~~~~~~~~~~~~~~~~~v~v~~i~~ 140 (161)
T cd01450 102 NVPKVIIVLTDGRSDDGGDPKEAAAKLKDEGIKVFVVGV 140 (161)
T ss_pred CCCeEEEEECCCCCCCCcchHHHHHHHHHCCCEEEEEec
Confidence 345678888877665433477889999999998888764
No 328
>cd01974 Nitrogenase_MoFe_beta Nitrogenase_MoFe_beta: Nitrogenase MoFe protein, beta subunit. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. The Molybdenum (Mo-) nitrogenase is the most widespread and best characterized of these systems. Mo-nitrogenase consists of the MoFe protein (component 1) and the Fe protein (component 2). MoFe is an alpha2beta2 tetramer. This group contains the beta subunit of the MoFe protein. Each alphabeta pair of MoFe contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha subunit. The Fe protein contains a single [4Fe-4S] cluster. Electrons are transferred from the [4Fe-4S] cluster of the Fe protein to the P-cluster of the MoFe and in turn to FeMoCo, the site of substrate reduction.
Probab=37.97 E-value=2.1e+02 Score=24.12 Aligned_cols=77 Identities=14% Similarity=-0.001 Sum_probs=46.3
Q ss_pred chHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhc--CCCc---chhHHHHHHHHHHhcCCCeEEEEEEe
Q 030535 58 PLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIH--NTDK---GYVDAKSVIAALKSKGVSAIGAAGFC 132 (175)
Q Consensus 58 ~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~--~~~~---~~~d~~~~~~~l~~~~~~~i~v~G~S 132 (175)
.....+++.|.+.|..++..-.....+. ....+.++.+.. .... ...|..++.+.+++.+.+ .++|+|
T Consensus 313 ~~~~~la~~L~elGm~v~~~~~~~~~~~-----~~~~~~~~l~~~~~~~~~~v~~~~d~~e~~~~i~~~~pD--liiG~s 385 (435)
T cd01974 313 DFLIGLTSFLLELGMEPVHVLTGNGGKR-----FEKEMQALLDASPYGAGAKVYPGKDLWHLRSLLFTEPVD--LLIGNT 385 (435)
T ss_pred HHHHHHHHHHHHCCCEEEEEEeCCCCHH-----HHHHHHHHHhhcCCCCCcEEEECCCHHHHHHHHhhcCCC--EEEECc
Confidence 3456788999988988755332211111 122344455432 1111 126888888888776555 799999
Q ss_pred ccHHHHHHh
Q 030535 133 WGGVVAAKL 141 (175)
Q Consensus 133 ~GG~ia~~~ 141 (175)
++-.++.++
T Consensus 386 ~~~~~a~~~ 394 (435)
T cd01974 386 YGKYIARDT 394 (435)
T ss_pred cHHHHHHHh
Confidence 987777764
No 329
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=37.74 E-value=43 Score=25.80 Aligned_cols=32 Identities=28% Similarity=0.283 Sum_probs=24.4
Q ss_pred HHHHHHHHhcCCC--e--EEEEEEeccHHHHHHhcc
Q 030535 112 KSVIAALKSKGVS--A--IGAAGFCWGGVVAAKLAS 143 (175)
Q Consensus 112 ~~~~~~l~~~~~~--~--i~v~G~S~GG~ia~~~a~ 143 (175)
..+++.|.++++. + -.+.|-|.|+.++..++.
T Consensus 15 ~GVl~~L~e~g~~l~~~~~~i~GtSAGAl~aa~~a~ 50 (243)
T cd07204 15 VGVASALREHAPRLLQNARRIAGASAGAIVAAVVLC 50 (243)
T ss_pred HHHHHHHHHcCcccccCCCEEEEEcHHHHHHHHHHh
Confidence 3567777777643 1 289999999999998774
No 330
>COG0400 Predicted esterase [General function prediction only]
Probab=36.94 E-value=1.2e+02 Score=22.98 Aligned_cols=43 Identities=21% Similarity=0.057 Sum_probs=32.1
Q ss_pred CCCeEEEEecCCCCC--CcchHHHHHHHHHhCCCEEEeccCCCCC
Q 030535 41 DSKSAILLISDVFGY--EAPLFRKLADKVAGAGFLVVAPDFFYGD 83 (175)
Q Consensus 41 ~~~~~vv~lhg~~g~--~~~~~~~~a~~la~~G~~vi~~D~~~g~ 83 (175)
.+...|+++||-... .......+.+.|.+.|..|-.-++..|.
T Consensus 144 ~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~~GH 188 (207)
T COG0400 144 LAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHEGGH 188 (207)
T ss_pred cCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEecCCC
Confidence 356789999976542 3455677888999999999988876444
No 331
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=36.92 E-value=52 Score=24.91 Aligned_cols=16 Identities=19% Similarity=0.154 Sum_probs=13.8
Q ss_pred HHHHHhCCCEEEeccC
Q 030535 64 ADKVAGAGFLVVAPDF 79 (175)
Q Consensus 64 a~~la~~G~~vi~~D~ 79 (175)
+.+||++|+.|+++|.
T Consensus 52 a~~LA~~G~~V~avD~ 67 (218)
T PRK13255 52 MLWLAEQGHEVLGVEL 67 (218)
T ss_pred HHHHHhCCCeEEEEcc
Confidence 5667889999999996
No 332
>PRK12828 short chain dehydrogenase; Provisional
Probab=36.76 E-value=55 Score=24.11 Aligned_cols=31 Identities=26% Similarity=0.131 Sum_probs=23.0
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
.+++.|+.|.- -..++++|+++|+.|+..+-
T Consensus 9 ~vlItGatg~i---G~~la~~l~~~G~~v~~~~r 39 (239)
T PRK12828 9 VVAITGGFGGL---GRATAAWLAARGARVALIGR 39 (239)
T ss_pred EEEEECCCCcH---hHHHHHHHHHCCCeEEEEeC
Confidence 46666666542 35789999999999999874
No 333
>KOG2585 consensus Uncharacterized conserved protein [Function unknown]
Probab=36.38 E-value=79 Score=26.85 Aligned_cols=36 Identities=11% Similarity=-0.041 Sum_probs=25.8
Q ss_pred CCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEecc
Q 030535 42 SKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPD 78 (175)
Q Consensus 42 ~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D 78 (175)
..|.|+++- +.|.+...-.-.+++|+.+||.++.+-
T Consensus 265 ~~P~V~Ilc-gpgnnggdg~v~gRHL~~~G~~~vi~~ 300 (453)
T KOG2585|consen 265 QWPLVAILC-GPGNNGGDGLVCGRHLAQHGYTPVIYY 300 (453)
T ss_pred CCceEEEEe-CCCCccchhHHHHHHHHHcCceeEEEe
Confidence 457788888 444444444458999999999888765
No 334
>cd08176 LPO Lactadehyde:propanediol oxidoreductase (LPO) catalyzes the interconversion between L-lactaldehyde and L-1,2-propanediol in Escherichia coli and other enterobacteria. Lactadehyde:propanediol oxidoreductase (LPO) is a member of the group III iron-activated dehydrogenases which catalyze the interconversion between L-lactaldehyde and L-1,2-propanediol in Escherichia coli and other enterobacteria. L-Fucose and L-rhamnose is used by Escherichia coli through an inducible pathway mediated by the fucose regulon comprising four linked oeprons fucO, fucA, fucPIK, and fucR. The fucA-encoded aldolase catalyzes the formation of dihydroxyacetone phosphate and L-lactaldehyde. Under anaerobic conditions, with NADH as a cofactor, lactaldehyde is converted by a fucO-encoded Lactadehyde:propanediol oxidoreductase (LPO) to L-1,2-propanediol, which is excreted as a fermentation product. In mutant strains, E. coli adapted to grow on L-1,2-propanediol, FucO catalyzes the oxidation of the polyol to
Probab=36.33 E-value=2.4e+02 Score=23.18 Aligned_cols=63 Identities=22% Similarity=0.209 Sum_probs=38.3
Q ss_pred EEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcCCC
Q 030535 45 AILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVS 124 (175)
Q Consensus 45 ~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~ 124 (175)
.++++.+..-.....+..+.+.|.++|..+..+|-...++. . +.+..+++.+++.+.+
T Consensus 30 ~~lvv~~~~~~~~~~~~~v~~~L~~~~~~~~~f~~v~~~p~---------~-------------~~v~~~~~~~~~~~~D 87 (377)
T cd08176 30 KALIVTDKGLVKIGVVEKVTDVLDEAGIDYVIYDGVKPNPT---------I-------------TNVKDGLAVFKKEGCD 87 (377)
T ss_pred eEEEECCchHhhcCcHHHHHHHHHHcCCeEEEeCCCCCCCC---------H-------------HHHHHHHHHHHhcCCC
Confidence 35566543322224567788889888988877762222222 1 5577888888887777
Q ss_pred eEEEE
Q 030535 125 AIGAA 129 (175)
Q Consensus 125 ~i~v~ 129 (175)
-|.-+
T Consensus 88 ~IIav 92 (377)
T cd08176 88 FIISI 92 (377)
T ss_pred EEEEe
Confidence 44433
No 335
>PRK05568 flavodoxin; Provisional
Probab=36.15 E-value=1.4e+02 Score=20.34 Aligned_cols=38 Identities=21% Similarity=0.309 Sum_probs=24.2
Q ss_pred CCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC
Q 030535 42 SKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF 80 (175)
Q Consensus 42 ~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~ 80 (175)
.++.++|...+++.. .....+.+.|...|+.++..-+.
T Consensus 82 ~k~~~~f~t~G~~~~-~~~~~~~~~l~~~g~~~~~~~~~ 119 (142)
T PRK05568 82 GKKLVLFGSYGWGDG-EWMRDWVERMEGYGANLVNEGLI 119 (142)
T ss_pred CCEEEEEEccCCCCC-hHHHHHHHHHHHCCCEEeCCcEE
Confidence 446666665444432 45677788887788888776443
No 336
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=35.83 E-value=68 Score=26.05 Aligned_cols=37 Identities=22% Similarity=0.194 Sum_probs=28.1
Q ss_pred eEEEEe-cCCCCCCcchHHHHHHHHHhCCCEEEeccCC
Q 030535 44 SAILLI-SDVFGYEAPLFRKLADKVAGAGFLVVAPDFF 80 (175)
Q Consensus 44 ~~vv~l-hg~~g~~~~~~~~~a~~la~~G~~vi~~D~~ 80 (175)
+.+|++ |.+++.....-+.++..|+++|+.|+=.+-.
T Consensus 5 ~~~~~~~~~~w~~~~~~~qhl~~~~a~~~~~vl~v~~~ 42 (373)
T cd04950 5 PDILVFSADDWDFLWQRPQHLAARLAERGNRVLYVEPP 42 (373)
T ss_pred CeEEEecccCcCCCCCCHHHHHHHHHhCCCeEEEEeCC
Confidence 455555 6677755667789999999889999977754
No 337
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=35.81 E-value=28 Score=26.69 Aligned_cols=16 Identities=13% Similarity=0.098 Sum_probs=14.3
Q ss_pred HHHHHhCCCEEEeccC
Q 030535 64 ADKVAGAGFLVVAPDF 79 (175)
Q Consensus 64 a~~la~~G~~vi~~D~ 79 (175)
+.+|+++||.|+..|+
T Consensus 58 ~~~LA~~G~~V~GvDl 73 (226)
T PRK13256 58 MLFFLSKGVKVIGIEL 73 (226)
T ss_pred HHHHHhCCCcEEEEec
Confidence 5678999999999997
No 338
>cd08188 Fe-ADH4 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenase-like. Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions. The protein structure represents a dehydroquinate synthase-like fold and is belonged to the alcohol dehydrogenase-like superfamily. They are distinct from other alcohol dehydrogenases which contain different protein domains. Proteins of this family have not been characterized. Their specific function is unknown.
Probab=35.58 E-value=2.5e+02 Score=23.12 Aligned_cols=63 Identities=19% Similarity=0.151 Sum_probs=36.9
Q ss_pred EEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcCCC
Q 030535 45 AILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVS 124 (175)
Q Consensus 45 ~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~ 124 (175)
.++++.+..-........+.+.|.+.|+.+..+|-...+|. . +++...++.+++.+.+
T Consensus 30 ~~livt~~~~~~~~~~~~v~~~L~~~~~~~~~~~~v~~~p~---------~-------------~~v~~~~~~~~~~~~d 87 (377)
T cd08188 30 KVLLVSDPGVIKAGWVDRVIESLEEAGLEYVVFSDVSPNPR---------D-------------EEVMAGAELYLENGCD 87 (377)
T ss_pred eEEEEeCcchhhCccHHHHHHHHHHcCCeEEEeCCCCCCCC---------H-------------HHHHHHHHHHHhcCCC
Confidence 45556643322223567788888888988877662111111 1 5577777888877777
Q ss_pred eEEEE
Q 030535 125 AIGAA 129 (175)
Q Consensus 125 ~i~v~ 129 (175)
-|.-+
T Consensus 88 ~IIai 92 (377)
T cd08188 88 VIIAV 92 (377)
T ss_pred EEEEe
Confidence 44433
No 339
>cd03466 Nitrogenase_NifN_2 Nitrogenase_nifN_2: A subgroup of the NifN subunit of the NifEN complex: NifN forms an alpha2beta2 tetramer with NifE. NifN and nifE are structurally homologous to nitrogenase MoFe protein beta and alpha subunits respectively. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of the MoFe protein. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to the NifEN complex where it is further processed to FeMoco. The nifEN bound precursor of FeMoco has been identified as a molybdenum-free, iron- and sulfur- containing analog of FeMoco. It has been suggested that this nifEN bound precursor also acts as a cofactor precursor in nitrogenase systems which require a cofactor other than FeMoco: i.e. iron-vanadium cofactor (FeVco) or iron only cofactor (FeFeco). This group also contains the Clostidium fused NifN-NifB protein.
Probab=35.44 E-value=2.4e+02 Score=23.68 Aligned_cols=78 Identities=15% Similarity=-0.013 Sum_probs=45.4
Q ss_pred chHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcc---hhHHHHHHHHHHhcCCCeEEEEEEecc
Q 030535 58 PLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKG---YVDAKSVIAALKSKGVSAIGAAGFCWG 134 (175)
Q Consensus 58 ~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~d~~~~~~~l~~~~~~~i~v~G~S~G 134 (175)
.....+++.|.+.|..++..-..... ......+.++......... ..|...+.+++++.+.+ .++|.|++
T Consensus 310 ~~~~~l~~~L~elG~~~~~v~~~~~~-----~~~~~~l~~~~~~~~~~~~v~~~~d~~e~~~~l~~~~~d--liiG~s~~ 382 (429)
T cd03466 310 DFVVAITRFVLENGMVPVLIATGSES-----KKLKEKLEEDLKEYVEKCVILDGADFFDIESYAKELKID--VLIGNSYG 382 (429)
T ss_pred HHHHHHHHHHHHCCCEEEEEEeCCCC-----hHHHHHHHHHHHhcCCceEEEeCCCHHHHHHHHHhcCCC--EEEECchh
Confidence 35567888998889886443321111 1111222233332222221 34778888888776555 88999998
Q ss_pred HHHHHHhc
Q 030535 135 GVVAAKLA 142 (175)
Q Consensus 135 G~ia~~~a 142 (175)
-.++.++.
T Consensus 383 ~~~a~~~~ 390 (429)
T cd03466 383 RRIAEKLG 390 (429)
T ss_pred HHHHHHcC
Confidence 87777643
No 340
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=35.38 E-value=77 Score=25.17 Aligned_cols=34 Identities=12% Similarity=0.255 Sum_probs=24.1
Q ss_pred CeEEEEecCCCC----CCcchHHHHHHHHHhCCCEEEe
Q 030535 43 KSAILLISDVFG----YEAPLFRKLADKVAGAGFLVVA 76 (175)
Q Consensus 43 ~~~vv~lhg~~g----~~~~~~~~~a~~la~~G~~vi~ 76 (175)
.+.+++.|++.. +..+.|..+++.|.++|+.++.
T Consensus 178 ~~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl 215 (322)
T PRK10964 178 GPYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKL 215 (322)
T ss_pred CCeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEE
Confidence 455667776542 3334688999999888998775
No 341
>PF13378 MR_MLE_C: Enolase C-terminal domain-like; PDB: 3FCP_B 3P0W_D 3VFC_A 3VDG_A 3FJ4_B 3CT2_B 3DGB_A 3V3W_A 3V4B_A 3NO1_E ....
Probab=35.34 E-value=76 Score=20.79 Aligned_cols=57 Identities=11% Similarity=0.077 Sum_probs=37.4
Q ss_pred hHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcCCCeEEEEEEeccHHH
Q 030535 59 LFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVV 137 (175)
Q Consensus 59 ~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~v~G~S~GG~i 137 (175)
....+.+.+....+.++.+|.. .|. + .....+.+..++. .+-++-|||++.+
T Consensus 6 ~~~~~~~li~~~a~d~~~~~~~~~GG-----------i-------------t~~~~i~~~A~~~---gi~~~~h~~~~~i 58 (111)
T PF13378_consen 6 SLHDFRRLIEAGAVDIVQIDPTRCGG-----------I-------------TEALRIAALAEAH---GIPVMPHSMESGI 58 (111)
T ss_dssp SHHHHHHHHHTTSCSEEEEBHHHHTS-----------H-------------HHHHHHHHHHHHT---T-EEEEBSSSSHH
T ss_pred CHHHHHHHHHcCCCCEEEeCchhcCC-----------H-------------HHHHHHHHHHHHh---CCCEEecCCCCcH
Confidence 4566777777777899999964 221 1 3355666666665 5668888888877
Q ss_pred HHHhc
Q 030535 138 AAKLA 142 (175)
Q Consensus 138 a~~~a 142 (175)
++.++
T Consensus 59 ~~aa~ 63 (111)
T PF13378_consen 59 GLAAS 63 (111)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77543
No 342
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=35.19 E-value=74 Score=25.62 Aligned_cols=36 Identities=19% Similarity=0.329 Sum_probs=26.6
Q ss_pred CeEEEEecC-CCC----CCcchHHHHHHHHHhCCCEEEecc
Q 030535 43 KSAILLISD-VFG----YEAPLFRKLADKVAGAGFLVVAPD 78 (175)
Q Consensus 43 ~~~vv~lhg-~~g----~~~~~~~~~a~~la~~G~~vi~~D 78 (175)
+|.|++.|| ..+ +..+.|..+++.|.++|+.|+.+-
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g 215 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFG 215 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEec
Confidence 467777776 442 334578999999999998888754
No 343
>PF00289 CPSase_L_chain: Carbamoyl-phosphate synthase L chain, N-terminal domain; InterPro: IPR005481 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below). CPSase catalyses the synthesis of carbamoyl phosphate from biocarbonate, ATP and glutamine (6.3.5.5 from EC) or ammonia (6.3.4.16 from EC), and represents the first committed step in pyrimidine and arginine biosynthesis in prokaryotes and eukaryotes, and in the urea cycle in most terrestrial vertebrates [, ]. CPSase has three active sites, one in the small subunit and two in the large subunit. The small subunit contains the glutamine binding site and catalyses the hydrolysis of glutamine to glutamate and ammonia. The large subunit has two homologous carboxy phosphate domains, both of which have ATP-binding sites; however, the N-terminal carboxy phosphate domain catalyses the phosphorylation of biocarbonate, while the C-terminal domain catalyses the phosphorylation of the carbamate intermediate []. The carboxy phosphate domain found duplicated in the large subunit of CPSase is also present as a single copy in the biotin-dependent enzymes acetyl-CoA carboxylase (6.4.1.2 from EC) (ACC), propionyl-CoA carboxylase (6.4.1.3 from EC) (PCCase), pyruvate carboxylase (6.4.1.1 from EC) (PC) and urea carboxylase (6.3.4.6 from EC). Most prokaryotes carry one form of CPSase that participates in both arginine and pyrimidine biosynthesis, however certain bacteria can have separate forms. The large subunit in bacterial CPSase has four structural domains: the carboxy phosphate domain 1, the oligomerisation domain, the carbamoyl phosphate domain 2 and the allosteric domain []. CPSase heterodimers from Escherichia coli contain two molecular tunnels: an ammonia tunnel and a carbamate tunnel. These inter-domain tunnels connect the three distinct active sites, and function as conduits for the transport of unstable reaction intermediates (ammonia and carbamate) between successive active sites []. The catalytic mechanism of CPSase involves the diffusion of carbamate through the interior of the enzyme from the site of synthesis within the N-terminal domain of the large subunit to the site of phosphorylation within the C-terminal domain. Eukaryotes have two distinct forms of CPSase: a mitochondrial enzyme (CPSase I) that participates in both arginine biosynthesis and the urea cycle; and a cytosolic enzyme (CPSase II) involved in pyrimidine biosynthesis. CPSase II occurs as part of a multi-enzyme complex along with aspartate transcarbamoylase and dihydroorotase; this complex is referred to as the CAD protein []. The hepatic expression of CPSase is transcriptionally regulated by glucocorticoids and/or cAMP []. There is a third form of the enzyme, CPSase III, found in fish, which uses glutamine as a nitrogen source instead of ammonia []. CPSase III is closely related to CPSase I, and is composed of a single polypeptide that may have arisen from gene fusion of the glutaminase and synthetase domains []. This entry represents the N-terminal domain of the large subunit of carbamoyl phosphate synthase. This domain can also be found in certain other related proteins. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VA7_A 3OUU_A 3OUZ_B 1W96_B 1W93_A 1ULZ_A 3HB9_C 3HO8_A 3BG5_C 3HBL_A ....
Probab=34.93 E-value=41 Score=22.61 Aligned_cols=33 Identities=18% Similarity=0.353 Sum_probs=21.0
Q ss_pred EEEEecCCCCCCcchHHHHHHHHHhCCCEEEecc
Q 030535 45 AILLISDVFGYEAPLFRKLADKVAGAGFLVVAPD 78 (175)
Q Consensus 45 ~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D 78 (175)
.+..+|+|+|.- ..-..+++.+.+.|+.++-|+
T Consensus 74 g~~~i~pGyg~l-se~~~fa~~~~~~gi~fiGp~ 106 (110)
T PF00289_consen 74 GADAIHPGYGFL-SENAEFAEACEDAGIIFIGPS 106 (110)
T ss_dssp TESEEESTSSTT-TTHHHHHHHHHHTT-EESSS-
T ss_pred cCcccccccchh-HHHHHHHHHHHHCCCEEECcC
Confidence 466677777754 334577777777888776654
No 344
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=34.92 E-value=2.1e+02 Score=22.18 Aligned_cols=39 Identities=13% Similarity=0.074 Sum_probs=25.6
Q ss_pred CCeEEEEecCCCCCCcchHHHHHHHHHhCCCE-EEeccCC
Q 030535 42 SKSAILLISDVFGYEAPLFRKLADKVAGAGFL-VVAPDFF 80 (175)
Q Consensus 42 ~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~-vi~~D~~ 80 (175)
..+-|+++.-..+......+.+.+.|.+.|+. |-.++.+
T Consensus 27 ~~~rI~~iptAS~~~~~~~~~~~~~~~~lG~~~v~~l~i~ 66 (250)
T TIGR02069 27 EDAIIVIITSASEEPREVGERYITIFSRLGVKEVKILDVR 66 (250)
T ss_pred CCceEEEEeCCCCChHHHHHHHHHHHHHcCCceeEEEecC
Confidence 44668888755543334566777888888984 5666653
No 345
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=34.81 E-value=45 Score=25.80 Aligned_cols=32 Identities=25% Similarity=0.232 Sum_probs=24.3
Q ss_pred HHHHHHHHhcCCC-eEEEEEEeccHHHHHHhcc
Q 030535 112 KSVIAALKSKGVS-AIGAAGFCWGGVVAAKLAS 143 (175)
Q Consensus 112 ~~~~~~l~~~~~~-~i~v~G~S~GG~ia~~~a~ 143 (175)
..+++.+.+.+.. -=.+.|.|.|+.++..++.
T Consensus 14 ~Gvl~al~e~~~~~fd~i~GtSaGAi~a~~~~~ 46 (266)
T cd07208 14 AGVLDAFLEAGIRPFDLVIGVSAGALNAASYLS 46 (266)
T ss_pred HHHHHHHHHcCCCCCCEEEEECHHHHhHHHHHh
Confidence 4566777776554 3388999999999998764
No 346
>cd08187 BDH Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process. The butanol dehydrogenase (BDH) is involved in the final step of the butanol formation pathway in anaerobic micro-organism. Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process. Activity in the reverse direction was 50-fold lower than that in the forward direction. The NADH-BDH had higher activity with longer chained aldehydes and was inhibited by metabolites containing an adenine moiety. This protein family belongs to the so-called iron-containing alcohol dehydrogenase superfamily. Since members of this superfamily use different divalent ions, preferentially iron or zinc, it has been suggested to be renamed to family III metal-dependent polyol dehydrogenases.
Probab=34.69 E-value=2.2e+02 Score=23.37 Aligned_cols=62 Identities=21% Similarity=0.173 Sum_probs=37.4
Q ss_pred EEEecCCCCC-CcchHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcCCC
Q 030535 46 ILLISDVFGY-EAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVS 124 (175)
Q Consensus 46 vv~lhg~~g~-~~~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~ 124 (175)
++++.+.... ....+..+.+.|.++|+.+..+|-...++. .+++..+++.+++.+.+
T Consensus 31 ~livt~~~~~~~~~~~~~v~~~L~~~g~~~~~~~~v~~~p~----------------------~~~v~~~~~~~~~~~~D 88 (382)
T cd08187 31 VLLVYGGGSIKKNGLYDRVIASLKEAGIEVVELGGVEPNPR----------------------LETVREGIELCKEEKVD 88 (382)
T ss_pred EEEEeCCcHHHhcCcHHHHHHHHHHcCCeEEEECCccCCCC----------------------HHHHHHHHHHHHHcCCC
Confidence 4555543322 224466788889888998887772211221 15678888888887777
Q ss_pred eEEEE
Q 030535 125 AIGAA 129 (175)
Q Consensus 125 ~i~v~ 129 (175)
-|.-+
T Consensus 89 ~IIai 93 (382)
T cd08187 89 FILAV 93 (382)
T ss_pred EEEEe
Confidence 44433
No 347
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=34.66 E-value=57 Score=24.59 Aligned_cols=16 Identities=19% Similarity=0.233 Sum_probs=13.9
Q ss_pred HHHHHhCCCEEEeccC
Q 030535 64 ADKVAGAGFLVVAPDF 79 (175)
Q Consensus 64 a~~la~~G~~vi~~D~ 79 (175)
+.+||++|+.|+++|.
T Consensus 49 a~~LA~~G~~V~gvD~ 64 (213)
T TIGR03840 49 LAWLAEQGHRVLGVEL 64 (213)
T ss_pred HHHHHhCCCeEEEEeC
Confidence 5678889999999996
No 348
>PF13271 DUF4062: Domain of unknown function (DUF4062)
Probab=34.53 E-value=1.2e+02 Score=18.97 Aligned_cols=53 Identities=19% Similarity=0.258 Sum_probs=34.7
Q ss_pred HHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcCCCeEEEEEEeccHHH
Q 030535 61 RKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVV 137 (175)
Q Consensus 61 ~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~v~G~S~GG~i 137 (175)
..+.+.+.+.|+..+..+++ +. .. ......+++.+++.+. =|+++|.-+|...
T Consensus 16 ~~l~~~i~~~~~~~~~~e~~---~a--~~------------------~~~~~~cl~~v~~cDi-fI~ilG~rYG~~~ 68 (83)
T PF13271_consen 16 DALIEAIRRLGCEPVGMEFF---PA--SD------------------QSPLEICLKEVDECDI-FILILGNRYGSVP 68 (83)
T ss_pred HHHHHHHHHCCCeeeeeeee---cC--CC------------------CCHHHHHHHHHhhCCE-EEEeeccccCCCC
Confidence 45667777789988888864 11 00 0335667778877652 5788999888643
No 349
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=34.53 E-value=1.7e+02 Score=20.83 Aligned_cols=38 Identities=18% Similarity=0.213 Sum_probs=26.4
Q ss_pred CCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 42 SKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 42 ~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
.+|-|++.--|...+.....-+++.|++.||.|+-.=+
T Consensus 11 ~rprvlvak~GlDgHd~gakvia~~l~d~GfeVi~~g~ 48 (143)
T COG2185 11 ARPRVLVAKLGLDGHDRGAKVIARALADAGFEVINLGL 48 (143)
T ss_pred CCceEEEeccCccccccchHHHHHHHHhCCceEEecCC
Confidence 45666666545554444566788899999999987554
No 350
>PRK02399 hypothetical protein; Provisional
Probab=34.51 E-value=2.8e+02 Score=23.39 Aligned_cols=99 Identities=17% Similarity=0.154 Sum_probs=54.4
Q ss_pred eEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC-CCCCCCCCCCchh--------hHHHHHHhcCCCcchh-HHHH
Q 030535 44 SAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQF--------DREAWRKIHNTDKGYV-DAKS 113 (175)
Q Consensus 44 ~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~-~g~~~~~~~~~~~--------~~~~~~~~~~~~~~~~-d~~~ 113 (175)
+.|+++ |-+..+.+.+..+.+.+.++|..|+..|.- .+.+..++.-... +........+..+.++ -...
T Consensus 4 ~~I~ii-gT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~g 82 (406)
T PRK02399 4 KRIYIA-GTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEG 82 (406)
T ss_pred CEEEEE-eccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHH
Confidence 334444 466766677888888998899999999974 4433211110110 1111111111111111 1223
Q ss_pred HHHHHHh---c-CCCeEEEEEEeccHHHHHHhcc
Q 030535 114 VIAALKS---K-GVSAIGAAGFCWGGVVAAKLAS 143 (175)
Q Consensus 114 ~~~~l~~---~-~~~~i~v~G~S~GG~ia~~~a~ 143 (175)
+..++.+ + ..+-|.-+|=|.|..++....+
T Consensus 83 a~~~v~~L~~~g~i~gviglGGs~GT~lat~aMr 116 (406)
T PRK02399 83 AAAFVRELYERGDVAGVIGLGGSGGTALATPAMR 116 (406)
T ss_pred HHHHHHHHHhcCCccEEEEecCcchHHHHHHHHH
Confidence 3334332 3 3677888999999999988664
No 351
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=34.38 E-value=49 Score=23.42 Aligned_cols=31 Identities=35% Similarity=0.394 Sum_probs=22.9
Q ss_pred HHHHHHHHhcCC--CeEEEEEEeccHHHHHHhc
Q 030535 112 KSVIAALKSKGV--SAIGAAGFCWGGVVAAKLA 142 (175)
Q Consensus 112 ~~~~~~l~~~~~--~~i~v~G~S~GG~ia~~~a 142 (175)
..+++.+.+++. .--.+.|.|.|+.++..++
T Consensus 14 ~gvl~~l~~~~~~~~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 14 AGVLSALAERGLLDCVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHHHHHHhCCccCCCEEEEEcHHHHHHHHHh
Confidence 345666666654 4457889999999999877
No 352
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=34.23 E-value=44 Score=28.19 Aligned_cols=32 Identities=28% Similarity=0.244 Sum_probs=25.7
Q ss_pred HHHHHHHHhcCCCeEEEEEEeccHHHHHHhcc
Q 030535 112 KSVIAALKSKGVSAIGAAGFCWGGVVAAKLAS 143 (175)
Q Consensus 112 ~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a~ 143 (175)
..+++.|.+++...=.+.|-|.|+.++..++.
T Consensus 89 iGVLkaL~E~gl~p~vIsGTSaGAivAal~as 120 (421)
T cd07230 89 IGVLKALFEANLLPRIISGSSAGSIVAAILCT 120 (421)
T ss_pred HHHHHHHHHcCCCCCEEEEECHHHHHHHHHHc
Confidence 45778887877655589999999999998774
No 353
>cd08191 HHD 6-hydroxyhexanoate dehydrogenase (HHD) catalyzes the oxidation of 6-hydroxyhexanoate to 6-oxohexanoate. 6-hydroxyhexanoate dehydrogenase (HHD). The 6-hydroxyhexanoate dehydrogenase catalyzes the oxidation of 6-hydroxyhexanoate to 6-oxohexanoate. Some bacteria can grow on cyclic ketones, cyclohexylamine, and alcohols as sole carbon source. Cyclohexylamine is an insecticide and antiseptic in various industries and is considered a possible environmental pollutant. The degradation of these chemical compounds are through the cyclohexanol and cyclohexanone biological oxidation pathway. The intermediates of this pathway include cyclohexanol, cyclohexanone, e-caprolactone, 6-hydroxyhexanoate, 6-oxohexanoate and adipate. The 6-hydroxyhexanoate dehydrogenase catalyzes the oxidation of 6-hydroxyhexanoate to 6-oxohexanoate.
Probab=34.15 E-value=2.7e+02 Score=22.98 Aligned_cols=33 Identities=30% Similarity=0.399 Sum_probs=22.3
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEecc
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPD 78 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D 78 (175)
++++.+..-.....+..+.+.|.+.|+.+..+|
T Consensus 25 ~livt~~~~~~~~~~~~v~~~L~~~~~~~~~f~ 57 (386)
T cd08191 25 ALIVTDERMAGTPVFAELVQALAAAGVEVEVFD 57 (386)
T ss_pred EEEEECcchhhcchHHHHHHHHHHcCCeEEEEC
Confidence 555554433323567778888988899887766
No 354
>PRK07053 glutamine amidotransferase; Provisional
Probab=33.97 E-value=98 Score=23.71 Aligned_cols=18 Identities=22% Similarity=0.534 Sum_probs=14.5
Q ss_pred eEEEEEEeccHHHHHHhc
Q 030535 125 AIGAAGFCWGGVVAAKLA 142 (175)
Q Consensus 125 ~i~v~G~S~GG~ia~~~a 142 (175)
++=++|.|+|..+.....
T Consensus 83 ~~PvlGIC~G~Qlla~al 100 (234)
T PRK07053 83 GLPTLGICLGAQLIARAL 100 (234)
T ss_pred CCCEEEECccHHHHHHHc
Confidence 456999999999888744
No 355
>PF04263 TPK_catalytic: Thiamin pyrophosphokinase, catalytic domain; InterPro: IPR007371 Thiamin pyrophosphokinase (TPK, 2.7.6.2 from EC) catalyzes the transfer of a pyrophosphate group from ATP to vitamin B1 (thiamin) to form the coenzyme thiamin pyrophosphate (TPP). Thus, TPK is important for the formation of a coenzyme required for central metabolic functions. The structure of thiamin pyrophosphokinase suggests that the enzyme may operate by a mechanism of pyrophosphoryl transfer similar to those described for pyrophosphokinases functioning in nucleotide biosynthesis [].; GO: 0004788 thiamine diphosphokinase activity, 0005524 ATP binding, 0009229 thiamine diphosphate biosynthetic process; PDB: 2F17_B 1IG3_B 3S4Y_B 2OMK_B 1IG0_A 3MEL_B 3CQ9_A 3LM8_B 3K94_B 3L8M_B ....
Probab=33.95 E-value=40 Score=23.14 Aligned_cols=37 Identities=27% Similarity=0.370 Sum_probs=27.2
Q ss_pred CcchhHHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhc
Q 030535 105 DKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLA 142 (175)
Q Consensus 105 ~~~~~d~~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a 142 (175)
++-..|.+.+++++.+.+..+|.++|-. ||++=-.++
T Consensus 67 ~kD~TD~e~Al~~~~~~~~~~i~v~Ga~-GgR~DH~la 103 (123)
T PF04263_consen 67 EKDYTDLEKALEYAIEQGPDEIIVLGAL-GGRFDHTLA 103 (123)
T ss_dssp STTS-HHHHHHHHHHHTTTSEEEEES-S-SSSHHHHHH
T ss_pred ccccCHHHHHHHHHHHCCCCEEEEEecC-CCcHHHHHH
Confidence 5555899999999988888999999976 776544433
No 356
>PF09989 DUF2229: CoA enzyme activase uncharacterised domain (DUF2229); InterPro: IPR018709 Proteins containing this domain include various bacterial hypothetical proteins, as well as CoA enzyme activases. The exact function of this domain has not, as yet, been defined.
Probab=33.79 E-value=51 Score=25.12 Aligned_cols=37 Identities=24% Similarity=0.420 Sum_probs=25.5
Q ss_pred CeEEEEecCCCCC-CcchHHHHHHHHHhCCCEEEeccC
Q 030535 43 KSAILLISDVFGY-EAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 43 ~~~vv~lhg~~g~-~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
.+.|+++-+-+-. +...-..+.+.|.+.|+.|+..|+
T Consensus 183 ~~~Ivl~GrpY~~~D~~in~~I~~~l~~~G~~vit~d~ 220 (221)
T PF09989_consen 183 KPAIVLLGRPYNIYDPFINMGIPDKLRSLGVPVITEDM 220 (221)
T ss_pred CceEEEEcCCCcCCCcccCCchHHHHHHCCCeeeCccc
Confidence 3456665445543 323345789999999999999985
No 357
>PF04204 HTS: Homoserine O-succinyltransferase ; InterPro: IPR005697 This family of enzymes, homoserine O-succinyltransferase, catalyses the first step in the biosynthesis of methionine: Succinyl-CoA + L-homoserine = CoA + O-succinyl-L-homoserine This enzyme is consequently essential for the survival of bacteria, plants and fungi. Since they are not found in humans, they make a promising new target for antimicrobial drug development. Homoserine O-succinyltransferase (HST) is a representative from this class and has recently had the key amino acids involved in substrate specificity and catalysis elucidated [].; GO: 0016746 transferase activity, transferring acyl groups, 0019281 L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine, 0005737 cytoplasm; PDB: 2H2W_A 2GHR_A 2VDJ_A.
Probab=33.41 E-value=69 Score=25.74 Aligned_cols=30 Identities=17% Similarity=0.300 Sum_probs=26.1
Q ss_pred hHHHHHHHHHHhcCCCeEEEEEEeccHHHHHHh
Q 030535 109 VDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKL 141 (175)
Q Consensus 109 ~d~~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~ 141 (175)
+++..+++|.+++ ...-+..|||+..++.+
T Consensus 121 ~El~~i~dwa~~~---v~stl~iCWgAqAaLy~ 150 (298)
T PF04204_consen 121 DELTEIFDWAKTH---VTSTLFICWGAQAALYH 150 (298)
T ss_dssp HHHHHHHHHHHHH---EEEEEEETHHHHHHHHH
T ss_pred HHHHHHHHHHHHc---CCcchhhhHHHHHHHHH
Confidence 7788999999876 67889999999999973
No 358
>PRK09072 short chain dehydrogenase; Provisional
Probab=33.40 E-value=79 Score=23.96 Aligned_cols=31 Identities=23% Similarity=0.236 Sum_probs=22.6
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
.+++.|+.+. .-..+++.|+++|+.|+..+.
T Consensus 7 ~vlItG~s~~---iG~~ia~~l~~~G~~V~~~~r 37 (263)
T PRK09072 7 RVLLTGASGG---IGQALAEALAAAGARLLLVGR 37 (263)
T ss_pred EEEEECCCch---HHHHHHHHHHHCCCEEEEEEC
Confidence 4566666543 336789999999999998873
No 359
>TIGR00227 ribD_Cterm riboflavin-specific deaminase C-terminal domain. Eubacterial riboflavin-specific deaminases have a zinc-binding domain recognized by the dCMP_cyt_deam model toward the N-terminus and this domain toward the C-terminus. Yeast HTP reductase, a riboflavin-biosynthetic enzyme, and several archaeal proteins believed related to riboflavin biosynthesis consist only of this domain and lack the dCMP_cyt_deam domain.
Probab=33.01 E-value=1.5e+02 Score=21.92 Aligned_cols=47 Identities=19% Similarity=0.415 Sum_probs=33.0
Q ss_pred HHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhccCCCccEEE-EecCCCCC
Q 030535 110 DAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSHDIQAAV-VLHPGAIT 159 (175)
Q Consensus 110 d~~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a~~~~v~~~v-~~~p~~~~ 159 (175)
|+.++++.|++++..+|.+.| ||.++..+.....|+-+. .++|....
T Consensus 129 dl~~~l~~L~~~g~~~llveG---G~~L~~~fl~~~LvDel~l~i~P~ilG 176 (216)
T TIGR00227 129 DLKKLMEILYEEGINSVMVEG---GGTLNGSLLKEGLVDELIVYIAPKLLG 176 (216)
T ss_pred CHHHHHHHHHHcCCCEEEEee---CHHHHHHHHHCCCCCEEEEEECchhhC
Confidence 788899999888888888866 667776666555565555 34454444
No 360
>TIGR01303 IMP_DH_rel_1 IMP dehydrogenase family protein. This model represents a family of proteins, often annotated as a putative IMP dehydrogenase, related to IMP dehydrogenase and GMP reductase and restricted to the high GC Gram-positive bacteria. All species in which a member is found so far (Corynebacterium glutamicum, Mycobacterium tuberculosis, Streptomyces coelicolor, etc.) also have IMP dehydrogenase as described by TIGRFAMs entry TIGR01302.
Probab=33.01 E-value=2.3e+02 Score=24.34 Aligned_cols=61 Identities=20% Similarity=0.089 Sum_probs=37.9
Q ss_pred chHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcCCCeEEEEEEeccHHH
Q 030535 58 PLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVV 137 (175)
Q Consensus 58 ~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~v~G~S~GG~i 137 (175)
......++.|.+.|..++++|--+|.+. .+...++++++...+-..+.|..+-.-.
T Consensus 224 ~~~~~ra~~Lv~aGVd~i~~D~a~g~~~------------------------~~~~~i~~i~~~~~~~~vi~g~~~t~~~ 279 (475)
T TIGR01303 224 GDVGGKAKALLDAGVDVLVIDTAHGHQV------------------------KMISAIKAVRALDLGVPIVAGNVVSAEG 279 (475)
T ss_pred ccHHHHHHHHHHhCCCEEEEeCCCCCcH------------------------HHHHHHHHHHHHCCCCeEEEeccCCHHH
Confidence 3566889999999999999996555432 2444555665543333455565555555
Q ss_pred HHHhc
Q 030535 138 AAKLA 142 (175)
Q Consensus 138 a~~~a 142 (175)
+..+.
T Consensus 280 ~~~l~ 284 (475)
T TIGR01303 280 VRDLL 284 (475)
T ss_pred HHHHH
Confidence 44433
No 361
>PRK08177 short chain dehydrogenase; Provisional
Probab=32.94 E-value=64 Score=23.86 Aligned_cols=31 Identities=26% Similarity=0.125 Sum_probs=22.6
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
.+++.|+.+. .-..+++.|+++|+.|+..+.
T Consensus 3 ~vlItG~sg~---iG~~la~~l~~~G~~V~~~~r 33 (225)
T PRK08177 3 TALIIGASRG---LGLGLVDRLLERGWQVTATVR 33 (225)
T ss_pred EEEEeCCCch---HHHHHHHHHHhCCCEEEEEeC
Confidence 3556656553 235789999999999999884
No 362
>cd08179 NADPH_BDH NADPH-dependent butanol dehydrogenase involved in the butanol and ethanol formation pathway in bacteria. NADPH-dependent butanol dehydrogenase (BDH) is involved in the butanol and ethanol formation pathway of some bacteria. The fermentation process is characterized by an acid producing growth phase, followed by a solvent producing phase. The latter phase is associated with the induction of solventogenic enzymes such as butanol dehydrogenase. The activity of the enzymes require NADPH as cofactor, as well as divalent ions zinc or iron. This family is a member of the iron-containing alcohol dehydrogenase superfamily. Protein structure has a dehydroquinate synthase-like fold.
Probab=32.83 E-value=2.5e+02 Score=23.05 Aligned_cols=60 Identities=13% Similarity=0.019 Sum_probs=37.7
Q ss_pred EEEecCCCCCC-cchHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcCCC
Q 030535 46 ILLISDVFGYE-APLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVS 124 (175)
Q Consensus 46 vv~lhg~~g~~-~~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~ 124 (175)
++++.+..... ...+..+.+.|.+.|+.+..+|-...+|. .+.+..+++.+++.+.+
T Consensus 26 ~livt~~~~~~~~g~~~~v~~~L~~~g~~~~~~~~v~~~p~----------------------~~~v~~~~~~~~~~~~D 83 (375)
T cd08179 26 AFIVTGGGSMKKFGFLDKVEAYLKEAGIEVEVFEGVEPDPS----------------------VETVLKGAEAMREFEPD 83 (375)
T ss_pred EEEEeCchHHHhCChHHHHHHHHHHcCCeEEEeCCCCCCcC----------------------HHHHHHHHHHHHhcCCC
Confidence 55555433222 24567788999888999887772212222 15678888888887777
Q ss_pred eEE
Q 030535 125 AIG 127 (175)
Q Consensus 125 ~i~ 127 (175)
-|.
T Consensus 84 ~II 86 (375)
T cd08179 84 WII 86 (375)
T ss_pred EEE
Confidence 433
No 363
>PRK03094 hypothetical protein; Provisional
Probab=32.56 E-value=53 Score=20.92 Aligned_cols=22 Identities=14% Similarity=0.187 Sum_probs=18.2
Q ss_pred chHHHHHHHHHhCCCEEEeccC
Q 030535 58 PLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 58 ~~~~~~a~~la~~G~~vi~~D~ 79 (175)
+.+..+.+.|.++||.|+-++-
T Consensus 8 ~~Ls~i~~~L~~~GYeVv~l~~ 29 (80)
T PRK03094 8 QSLTDVQQALKQKGYEVVQLRS 29 (80)
T ss_pred cCcHHHHHHHHHCCCEEEecCc
Confidence 3467789999999999998763
No 364
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=32.42 E-value=1.4e+02 Score=23.69 Aligned_cols=93 Identities=14% Similarity=0.133 Sum_probs=44.4
Q ss_pred chHHHHHHHHHhCCC-------EEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcCCCeEEEEE
Q 030535 58 PLFRKLADKVAGAGF-------LVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVSAIGAAG 130 (175)
Q Consensus 58 ~~~~~~a~~la~~G~-------~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~v~G 130 (175)
...+.+...+.++|. +++..|- .|--.....+.......+...... ....++.++++.++ .-.++|
T Consensus 39 gia~ll~~~~~~~G~~~eeA~~~i~~vD~-~Gll~~~r~~l~~~~~~~a~~~~~-~~~~~L~e~i~~v~-----ptvlIG 111 (279)
T cd05312 39 GIADLIVSAMVREGLSEEEARKKIWLVDS-KGLLTKDRKDLTPFKKPFARKDEE-KEGKSLLEVVKAVK-----PTVLIG 111 (279)
T ss_pred HHHHHHHHHHHHcCCChhhccCeEEEEcC-CCeEeCCCCcchHHHHHHHhhcCc-ccCCCHHHHHHhcC-----CCEEEE
Confidence 344556666666788 8999995 442110111111112222222111 12245555555543 339999
Q ss_pred Ee-ccHHHHHH----hcc-CCCccEEEEecCCC
Q 030535 131 FC-WGGVVAAK----LAS-SHDIQAAVVLHPGA 157 (175)
Q Consensus 131 ~S-~GG~ia~~----~a~-~~~v~~~v~~~p~~ 157 (175)
-| .||.+.-. |+. .++.--..+.+|..
T Consensus 112 ~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNPt~ 144 (279)
T cd05312 112 LSGVGGAFTEEVVRAMAKSNERPIIFALSNPTS 144 (279)
T ss_pred eCCCCCCCCHHHHHHHHhcCCCCEEEECCCcCC
Confidence 99 46644433 442 23433344455554
No 365
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=32.36 E-value=1.7e+02 Score=21.86 Aligned_cols=46 Identities=11% Similarity=0.001 Sum_probs=31.4
Q ss_pred HHHHHHHhcC-CCeEEEEEEeccHHHHHHhc-cCC-CccEEEEecCCCC
Q 030535 113 SVIAALKSKG-VSAIGAAGFCWGGVVAAKLA-SSH-DIQAAVVLHPGAI 158 (175)
Q Consensus 113 ~~~~~l~~~~-~~~i~v~G~S~GG~ia~~~a-~~~-~v~~~v~~~p~~~ 158 (175)
+--+|+.+.- +.+..+-|-||||..+..+. +.| ...++|++++...
T Consensus 89 AyerYv~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYd 137 (227)
T COG4947 89 AYERYVIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYD 137 (227)
T ss_pred HHHHHHHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecceee
Confidence 3344555431 24567889999999999977 344 4677888887665
No 366
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=32.15 E-value=75 Score=19.34 Aligned_cols=21 Identities=33% Similarity=0.278 Sum_probs=17.3
Q ss_pred chHHHHHHHHHhCCCEEEecc
Q 030535 58 PLFRKLADKVAGAGFLVVAPD 78 (175)
Q Consensus 58 ~~~~~~a~~la~~G~~vi~~D 78 (175)
.....++..|++.|+.++..|
T Consensus 14 t~~~~l~~~l~~~g~~v~~~~ 34 (99)
T cd01983 14 TLAANLAAALAKRGKRVLLID 34 (99)
T ss_pred HHHHHHHHHHHHCCCeEEEEC
Confidence 345678999999999998887
No 367
>cd01423 MGS_CPS_I_III Methylglyoxal synthase-like domain found in pyr1 and URA1-like carbamoyl phosphate synthetases (CPS), including ammonia-dependent CPS Type I, and glutamine-dependent CPS Type III. These are multidomain proteins, in which MGS is the C-terminal domain.
Probab=31.93 E-value=99 Score=20.55 Aligned_cols=21 Identities=24% Similarity=0.354 Sum_probs=18.1
Q ss_pred cchHHHHHHHHHhCCCEEEec
Q 030535 57 APLFRKLADKVAGAGFLVVAP 77 (175)
Q Consensus 57 ~~~~~~~a~~la~~G~~vi~~ 77 (175)
...+..+++.|.+.||.+++-
T Consensus 12 k~~~~~~a~~l~~~G~~i~aT 32 (116)
T cd01423 12 KPELLPTAQKLSKLGYKLYAT 32 (116)
T ss_pred chhHHHHHHHHHHCCCEEEEc
Confidence 367889999999999999874
No 368
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=31.79 E-value=1.9e+02 Score=21.16 Aligned_cols=53 Identities=11% Similarity=0.013 Sum_probs=34.8
Q ss_pred HHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcCC-CeEEEEEEecc
Q 030535 66 KVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGV-SAIGAAGFCWG 134 (175)
Q Consensus 66 ~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~-~~i~v~G~S~G 134 (175)
.|.++|+..+.+|. .++.+.+.. .+...++..+++.+++.+. ++|.++--|.|
T Consensus 35 ~Lk~~Gik~li~Dk--DNTL~~~~~--------------~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaG 88 (168)
T PF09419_consen 35 HLKKKGIKALIFDK--DNTLTPPYE--------------DEIPPEYAEWLNELKKQFGKDRVLIVSNSAG 88 (168)
T ss_pred hhhhcCceEEEEcC--CCCCCCCCc--------------CcCCHHHHHHHHHHHHHCCCCeEEEEECCCC
Confidence 58889999999995 222211111 1112567777777777654 48999999986
No 369
>TIGR03018 pepcterm_TyrKin exopolysaccharide/PEPCTERM locus tyrosine autokinase. Members of this protein family are related to a known protein-tyrosine autokinase and to numerous homologs from exopolysaccharide biosynthesis region proteins, many of which are designated as chain length determinants. Most members of this family contain a short region, immediately C-terminal to the region modeled here, with an abundance of Tyr residues. These C-terminal tyrosine residues are likely to be autophosphorylation sites. Some members of this family are fusion proteins.
Probab=31.75 E-value=1.1e+02 Score=22.65 Aligned_cols=39 Identities=21% Similarity=0.035 Sum_probs=24.1
Q ss_pred CCeEEEEecCCCCCC-cchHHHHHHHHHh-CCCEEEeccCC
Q 030535 42 SKSAILLISDVFGYE-APLFRKLADKVAG-AGFLVVAPDFF 80 (175)
Q Consensus 42 ~~~~vv~lhg~~g~~-~~~~~~~a~~la~-~G~~vi~~D~~ 80 (175)
..+.|.+...-.|.- ...-..+|..|+. +|+.|+.+|.-
T Consensus 34 ~~~vi~v~s~kgG~GkSt~a~nLA~~la~~~g~~VLlvD~D 74 (207)
T TIGR03018 34 NNNLIMVTSSLPGEGKSFTAINLAISLAQEYDKTVLLIDAD 74 (207)
T ss_pred CCeEEEEECCCCCCCHHHHHHHHHHHHHHhcCCeEEEEECC
Confidence 345555554222221 1335668899996 69999999975
No 370
>cd01469 vWA_integrins_alpha_subunit Integrins are a class of adhesion receptors that link the extracellular matrix to the cytoskeleton and cooperate with growth factor receptors to promote celll survival, cell cycle progression and cell migration. Integrins consist of an alpha and a beta sub-unit. Each sub-unit has a large extracellular portion, a single transmembrane segment and a short cytoplasmic domain. The N-terminal domains of the alpha and beta subunits associate to form the integrin headpiece, which contains the ligand binding site, whereas the C-terminal segments traverse the plasma membrane and mediate interaction with the cytoskeleton and with signalling proteins.The VWA domains present in the alpha subunits of integrins seem to be a chordate specific radiation of the gene family being found only in vertebrates. They mediate protein-protein interactions.
Probab=31.72 E-value=1.4e+02 Score=21.44 Aligned_cols=38 Identities=16% Similarity=0.321 Sum_probs=26.7
Q ss_pred CCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 42 SKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 42 ~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
..+.+|++..|...........++.+.+.|+.+++.-.
T Consensus 103 ~~kv~illTDG~~~~~~~~~~~~~~~k~~gv~v~~Vgv 140 (177)
T cd01469 103 ATKVLVVITDGESHDDPLLKDVIPQAEREGIIRYAIGV 140 (177)
T ss_pred CCeEEEEEeCCCCCCccccHHHHHHHHHCCcEEEEEEe
Confidence 45678888878765433335677778788999888775
No 371
>PF00290 Trp_syntA: Tryptophan synthase alpha chain; InterPro: IPR002028 Tryptophan synthase (4.2.1.20 from EC) catalyzes the last step in the biosynthesis of tryptophan [, ]: L-serine + 1-(indol-3-yl)glycerol 3-phosphate = L-tryptophan + glyceraldehyde 3-phosphate + H2O It has two functional domains, each found in bacteria and plants on a separate subunit. In Escherichia coli, the 2 subunits, A and B, are encoded by the trpA and trpB genes respectively. The alpha chain is for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate and the beta chain IPR006653 from INTERPRO is for the synthesis of tryptophan from indole and serine. In fungi the two domains are fused together in a single multifunctional protein, in the order: (NH2-A-B-COOH) [, ]. The two domains of the Neurospora crassa polypeptide are linked by a connector of 54-amino acid residues that has less than 25% identity to the 45-residue connector of the Saccharomyces cerevisiae (Baker's yeast) polypeptide. Two acidic residues are believed to serve as proton donors/acceptors in the enzyme's catalytic mechanism.; GO: 0004834 tryptophan synthase activity, 0006568 tryptophan metabolic process; PDB: 1TJR_B 1RD5_B 1K8X_A 1QOQ_A 1KFE_A 1KFB_A 2CLO_A 1TTP_A 2RH9_A 1K7F_A ....
Probab=31.48 E-value=2.6e+02 Score=21.97 Aligned_cols=85 Identities=13% Similarity=0.114 Sum_probs=49.1
Q ss_pred CCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCc--hhhHHHHHHhcCCCcchhHHHHHHHHHH
Q 030535 42 SKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNP--QFDREAWRKIHNTDKGYVDAKSVIAALK 119 (175)
Q Consensus 42 ~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 119 (175)
....|.++..|+... +....+++.|.+.|..++=+-.|+.+|. .+.. +......+.. . ...+++-.+++.++
T Consensus 9 ~~~li~yitaG~P~~-~~~~~~~~~l~~~GaD~iEiGiPfSDP~--ADGpvIq~A~~rAL~~-G--~~~~~~~~~~~~ir 82 (259)
T PF00290_consen 9 RKALIPYITAGYPDL-ETTLEILKALEEAGADIIEIGIPFSDPV--ADGPVIQKASQRALKN-G--FTLEKIFELVKEIR 82 (259)
T ss_dssp BTEEEEEEETTSSSH-HHHHHHHHHHHHTTBSSEEEE--SSSCT--TSSHHHHHHHHHHHHT-T----HHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCH-HHHHHHHHHHHHcCCCEEEECCCCCCCC--CCCHHHHHHHHHHHHC-C--CCHHHHHHHHHHHh
Confidence 345567777677654 6778899999999999999888877665 2211 1111111111 1 11255555666666
Q ss_pred -hcCCCeEEEEEEe
Q 030535 120 -SKGVSAIGAAGFC 132 (175)
Q Consensus 120 -~~~~~~i~v~G~S 132 (175)
+....++.+|++-
T Consensus 83 ~~~~~~pivlm~Y~ 96 (259)
T PF00290_consen 83 KKEPDIPIVLMTYY 96 (259)
T ss_dssp HHCTSSEEEEEE-H
T ss_pred ccCCCCCEEEEeec
Confidence 3334589999983
No 372
>cd08183 Fe-ADH2 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenases (Fe-ADH). Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions. The protein structure represents a dehydroquinate synthase-like fold and is a member of the iron-activated alcohol dehydrogenase-like family. They are distinct from other alcohol dehydrogenases which contains different protein domain. Proteins of this family have not been characterized. Their specific function is unknown. They are mainly found in bacteria.
Probab=31.33 E-value=2.7e+02 Score=22.84 Aligned_cols=59 Identities=20% Similarity=0.259 Sum_probs=37.2
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcCCCe
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVSA 125 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~ 125 (175)
++++.+.... .+..+...|.+.|+.+..+|. .++|. . +++..+++.+++.+.+-
T Consensus 25 ~livtd~~~~---~~~~v~~~L~~~g~~~~~~~~-~~~p~---------~-------------~~v~~~~~~~~~~~~D~ 78 (374)
T cd08183 25 VLLVTGASSL---RAAWLIEALRAAGIEVTHVVV-AGEPS---------V-------------ELVDAAVAEARNAGCDV 78 (374)
T ss_pred EEEEECCchH---HHHHHHHHHHHcCCeEEEecC-CCCcC---------H-------------HHHHHHHHHHHhcCCCE
Confidence 5555533221 566778889888998888773 23332 1 55778888888877774
Q ss_pred EEEEE
Q 030535 126 IGAAG 130 (175)
Q Consensus 126 i~v~G 130 (175)
|.-+|
T Consensus 79 IIaiG 83 (374)
T cd08183 79 VIAIG 83 (374)
T ss_pred EEEec
Confidence 44443
No 373
>PRK05625 5-amino-6-(5-phosphoribosylamino)uracil reductase; Validated
Probab=31.25 E-value=1.6e+02 Score=22.04 Aligned_cols=40 Identities=18% Similarity=0.329 Sum_probs=29.9
Q ss_pred hHHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhccCCCccEEE
Q 030535 109 VDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSHDIQAAV 151 (175)
Q Consensus 109 ~d~~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a~~~~v~~~v 151 (175)
.|+.++++.|++++..+|.+.| ||.++..+.....|+.+.
T Consensus 127 ~dl~~~l~~L~~~g~~~vlveG---G~~l~~~fl~~~LvDel~ 166 (217)
T PRK05625 127 VDLPDLLEDLYERGIKRLMVEG---GGTLIWSMFKEGLVDEVR 166 (217)
T ss_pred cCHHHHHHHHHHCCCCEEEEec---CHHHHHHHHHCCCCcEEE
Confidence 4688889999888888888887 777777766555565555
No 374
>cd01453 vWA_transcription_factor_IIH_type Transcription factors IIH type: TFIIH is a multiprotein complex that is one of the five general transcription factors that binds RNA polymerase II holoenzyme. Orthologues of these genes are found in all completed eukaryotic genomes and all these proteins contain a VWA domain. The p44 subunit of TFIIH functions as a DNA helicase in RNA polymerase II transcription initiation and DNA repair, and its transcriptional activity is dependent on its C-terminal Zn-binding domains. The function of the vWA domain is unclear, but may be involved in complex assembly. The MIDAS motif is not conserved in this sub-group.
Probab=31.20 E-value=1.5e+02 Score=21.60 Aligned_cols=37 Identities=11% Similarity=0.170 Sum_probs=24.5
Q ss_pred CeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 43 KSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 43 ~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
+..||++.++...+......+++.+++.|+.|+++-+
T Consensus 108 ~~iiil~sd~~~~~~~~~~~~~~~l~~~~I~v~~Igi 144 (183)
T cd01453 108 REVLIIFSSLSTCDPGNIYETIDKLKKENIRVSVIGL 144 (183)
T ss_pred eEEEEEEcCCCcCChhhHHHHHHHHHHcCcEEEEEEe
Confidence 4467777654433323455788889888988877765
No 375
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=31.10 E-value=92 Score=23.45 Aligned_cols=31 Identities=23% Similarity=0.089 Sum_probs=22.1
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
.+++.|+.+. --..+++.|+++|+.|+..+.
T Consensus 12 ~vlItGa~g~---iG~~ia~~l~~~G~~V~~~~r 42 (255)
T PRK07523 12 RALVTGSSQG---IGYALAEGLAQAGAEVILNGR 42 (255)
T ss_pred EEEEECCcch---HHHHHHHHHHHcCCEEEEEeC
Confidence 4556656543 235789999999999998774
No 376
>COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism]
Probab=30.46 E-value=3e+02 Score=22.47 Aligned_cols=36 Identities=17% Similarity=0.335 Sum_probs=27.4
Q ss_pred EEEEecCCCCCCcchHHHHHHHHHhC--CCEEEeccCC
Q 030535 45 AILLISDVFGYEAPLFRKLADKVAGA--GFLVVAPDFF 80 (175)
Q Consensus 45 ~vv~lhg~~g~~~~~~~~~a~~la~~--G~~vi~~D~~ 80 (175)
..|++|=.-|.+...++++++.|.++ .|.|+...|+
T Consensus 216 ikv~lHla~g~~n~~y~~~fd~ltk~nvdfDVig~SyY 253 (403)
T COG3867 216 IKVALHLAEGENNSLYRWIFDELTKRNVDFDVIGSSYY 253 (403)
T ss_pred ceEEEEecCCCCCchhhHHHHHHHHcCCCceEEeeecc
Confidence 35667744455567899999999988 4899998876
No 377
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=30.30 E-value=2.9e+02 Score=22.17 Aligned_cols=106 Identities=13% Similarity=0.125 Sum_probs=57.1
Q ss_pred EEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCCCCCCCCCC-CCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcC-
Q 030535 45 AILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDL-NNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKG- 122 (175)
Q Consensus 45 ~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~- 122 (175)
.||...-|.|+=.+....-.+++..-+.++++.=|-+-.++... .+.+.... ....-++++.+.+.+..
T Consensus 35 lvV~~pTGtGWVdp~a~~a~E~l~~GD~A~va~QYSylPSw~sfl~dr~~a~~---------a~~aL~~aV~~~~~~lP~ 105 (289)
T PF10081_consen 35 LVVATPTGTGWVDPWAVDALEYLYGGDVAIVAMQYSYLPSWLSFLVDRDAARE---------AARALFEAVYARWSTLPE 105 (289)
T ss_pred EEEEcCCCCCccCHHHHhHHHHHhCCCeEEEEeccccccchHHHhcccchHHH---------HHHHHHHHHHHHHHhCCc
Confidence 34444445554334444455555544577777665444333100 11111111 11134566666666653
Q ss_pred --CCeEEEEEEeccHHHHHHh-cc----CCCccEEEEecCCCCC
Q 030535 123 --VSAIGAAGFCWGGVVAAKL-AS----SHDIQAAVVLHPGAIT 159 (175)
Q Consensus 123 --~~~i~v~G~S~GG~ia~~~-a~----~~~v~~~v~~~p~~~~ 159 (175)
-.|+.|.|-|.|+.-+... .. ..++++++...|....
T Consensus 106 ~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~~s 149 (289)
T PF10081_consen 106 DRRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPFFS 149 (289)
T ss_pred ccCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCCCC
Confidence 2489999999998887762 21 2478888877765543
No 378
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=30.24 E-value=65 Score=24.24 Aligned_cols=36 Identities=19% Similarity=0.227 Sum_probs=20.9
Q ss_pred CCeEEEEecCCCC----CCcchHHHHHHHHHhCCCEEEec
Q 030535 42 SKSAILLISDVFG----YEAPLFRKLADKVAGAGFLVVAP 77 (175)
Q Consensus 42 ~~~~vv~lhg~~g----~~~~~~~~~a~~la~~G~~vi~~ 77 (175)
.++.|++.++... +..+.|..+++.|.++++.|+.+
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~ 143 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLL 143 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE-
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEE
Confidence 3466666665543 33356888999999999777753
No 379
>PF04244 DPRP: Deoxyribodipyrimidine photo-lyase-related protein; InterPro: IPR007357 This family appears to be related to DNA photolyases.; PDB: 3ZXS_A.
Probab=30.11 E-value=1.9e+02 Score=22.16 Aligned_cols=22 Identities=27% Similarity=0.462 Sum_probs=16.5
Q ss_pred chHHHHHHHHHhCCCEEEeccC
Q 030535 58 PLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 58 ~~~~~~a~~la~~G~~vi~~D~ 79 (175)
..|+.+++.|.++||.|.-..+
T Consensus 49 saMRhfa~~L~~~G~~V~Y~~~ 70 (224)
T PF04244_consen 49 SAMRHFADELRAKGFRVHYIEL 70 (224)
T ss_dssp HHHHHHHHHHHHTT--EEEE-T
T ss_pred HHHHHHHHHHHhCCCEEEEEeC
Confidence 4678899999999999998886
No 380
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=29.87 E-value=1e+02 Score=22.84 Aligned_cols=31 Identities=23% Similarity=0.322 Sum_probs=22.5
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
++++.|+.+. --..+++.|+++|+.|+..+.
T Consensus 4 ~vlItG~s~~---iG~~la~~l~~~g~~vi~~~r 34 (245)
T PRK12824 4 IALVTGAKRG---IGSAIARELLNDGYRVIATYF 34 (245)
T ss_pred EEEEeCCCch---HHHHHHHHHHHcCCEEEEEeC
Confidence 4566655442 335789999999999999873
No 381
>PRK06924 short chain dehydrogenase; Provisional
Probab=29.84 E-value=97 Score=23.17 Aligned_cols=30 Identities=17% Similarity=0.161 Sum_probs=21.2
Q ss_pred EEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 47 LLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 47 v~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
+++.|+.+. .-..+++.|+++|+.|+..+.
T Consensus 4 vlItGasgg---iG~~ia~~l~~~g~~V~~~~r 33 (251)
T PRK06924 4 VIITGTSQG---LGEAIANQLLEKGTHVISISR 33 (251)
T ss_pred EEEecCCch---HHHHHHHHHHhcCCEEEEEeC
Confidence 445555442 336789999999999988773
No 382
>cd07995 TPK Thiamine pyrophosphokinase. Thiamine pyrophosphokinase (TPK, EC:2.7.6.2, also spelled thiamin pyrophosphokinase) catalyzes the transfer of a pyrophosphate group from ATP to vitamin B1 (thiamine) to form the coenzyme thiamine pyrophosphate (TPP). TPP is required for central metabolic functions, and thiamine deficiency is associated with potentially fatal human diseases. The structure of thiamine pyrophosphokinase suggests that the enzyme may operate by a mechanism of pyrophosphoryl transfer similar to those described for pyrophosphokinases functioning in nucleotide biosynthesis.
Probab=29.79 E-value=63 Score=24.14 Aligned_cols=36 Identities=25% Similarity=0.382 Sum_probs=28.8
Q ss_pred cchhHHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhc
Q 030535 106 KGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLA 142 (175)
Q Consensus 106 ~~~~d~~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a 142 (175)
+-..|.+.+++++.+++..+|.++|-. ||++=-.++
T Consensus 74 KD~TD~e~Al~~~~~~~~~~i~i~Ga~-GgR~DH~la 109 (208)
T cd07995 74 KDFTDFEKALKLALERGADEIVILGAT-GGRLDHTLA 109 (208)
T ss_pred CCCCHHHHHHHHHHHcCCCEEEEEccC-CCcHHHHHH
Confidence 556899999999999988899999976 776544433
No 383
>PRK05370 argininosuccinate synthase; Validated
Probab=29.70 E-value=2.5e+02 Score=24.07 Aligned_cols=108 Identities=10% Similarity=-0.030 Sum_probs=51.3
Q ss_pred CCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCC-CcchhHH-----HHHH
Q 030535 42 SKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNT-DKGYVDA-----KSVI 115 (175)
Q Consensus 42 ~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~-----~~~~ 115 (175)
..+.||.+.||... .-+..+|.++||.|+++----|++. ..+ -..+.+....... .-.+.|+ +..+
T Consensus 11 ~~KVvLAYSGGLDT-----Sv~l~wL~e~~~eVia~~aDvGQ~~--~ed-~~~i~~kA~~~GA~~~~viDlr~eF~e~~i 82 (447)
T PRK05370 11 GQRVGIAFSGGLDT-----SAALLWMRQKGAVPYAYTANLGQPD--EDD-YDAIPRRAMEYGAENARLIDCRAQLVAEGI 82 (447)
T ss_pred CCEEEEEecCCchH-----HHHHHHHHhcCCeEEEEEEECCCCC--ccc-hHHHHHHHHHhCCCEEEEeccHHHHHHHHH
Confidence 34667777755443 2357778777988877764455532 111 1122222222222 1122222 2344
Q ss_pred HHHHhcC-C----CeEEEEEEeccHHHHHHhccC--CCccEEEEecCCC
Q 030535 116 AALKSKG-V----SAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPGA 157 (175)
Q Consensus 116 ~~l~~~~-~----~~i~v~G~S~GG~ia~~~a~~--~~v~~~v~~~p~~ 157 (175)
..++.+- . ......|.+.+-.+....... ....+-++.|++.
T Consensus 83 ~aI~anA~Y~~~~e~~Y~l~t~LaRplia~~lv~~A~~~ga~aIAHG~T 131 (447)
T PRK05370 83 AAIQCGAFHISTGGVTYFNTTPLGRAVTGTMLVAAMKEDGVNIWGDGST 131 (447)
T ss_pred HHHHcCCccccccCccccCCCcchHHHHHHHHHHHHHHhCCcEEEEcCC
Confidence 4554431 1 345777777776554442211 2344445555554
No 384
>cd08170 GlyDH Glycerol dehydrogenases (GlyDH) catalyzes oxidation of glycerol to dihydroxyacetone in glycerol dissmilation. Glycerol dehydrogenases (GlyDH) is a key enzyme in the glycerol dissimilation pathway . In anaerobic conditions, many microorganisms utilize glycerol as a source of carbon through coupled oxidative and reductive pathways. One of the pathways involves the oxidation of glycerol to dihydroxyacetone with the reduction of NAD+ to NADH catalyzed by glycerol dehydrogenases. Dihydroxyacetone is then phosphorylated by dihydroxyacetone kinase and enters the glycolytic pathway for further degradation. The activity of GlyDH is zinc-dependent. The zinc ion plays a role in stabilizing an alkoxide intermediate at the active site.
Probab=29.67 E-value=1.5e+02 Score=23.98 Aligned_cols=61 Identities=21% Similarity=0.341 Sum_probs=37.4
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcCCCe
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVSA 125 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~ 125 (175)
++++++..-.. .....+.+.|.++|..+. ++...+.+. . +++..+++.+++.+.+-
T Consensus 25 ~livt~~~~~~-~~~~~v~~~L~~~~i~~~-~~~~~~~p~---------~-------------~~v~~~~~~~~~~~~D~ 80 (351)
T cd08170 25 ALIIADEFVLD-LVGAKIEESLAAAGIDAR-FEVFGGECT---------R-------------AEIERLAEIARDNGADV 80 (351)
T ss_pred EEEEECHHHHH-HHHHHHHHHHHhCCCeEE-EEEeCCcCC---------H-------------HHHHHHHHHHhhcCCCE
Confidence 55555443333 566778888888888775 443334333 1 56778888888776674
Q ss_pred EEEEE
Q 030535 126 IGAAG 130 (175)
Q Consensus 126 i~v~G 130 (175)
|.-+|
T Consensus 81 IIavG 85 (351)
T cd08170 81 VIGIG 85 (351)
T ss_pred EEEec
Confidence 44443
No 385
>PRK08339 short chain dehydrogenase; Provisional
Probab=29.62 E-value=1e+02 Score=23.55 Aligned_cols=31 Identities=16% Similarity=-0.030 Sum_probs=22.2
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
++++.|+.+. --..+++.|+++|+.|+..+.
T Consensus 10 ~~lItGas~g---IG~aia~~l~~~G~~V~~~~r 40 (263)
T PRK08339 10 LAFTTASSKG---IGFGVARVLARAGADVILLSR 40 (263)
T ss_pred EEEEeCCCCc---HHHHHHHHHHHCCCEEEEEeC
Confidence 4556655442 336789999999999998774
No 386
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=29.59 E-value=2.6e+02 Score=21.49 Aligned_cols=38 Identities=16% Similarity=0.027 Sum_probs=25.1
Q ss_pred CeEEEEecCCCCC--CcchHHHHHHHHHhCCCEEEeccCC
Q 030535 43 KSAILLISDVFGY--EAPLFRKLADKVAGAGFLVVAPDFF 80 (175)
Q Consensus 43 ~~~vv~lhg~~g~--~~~~~~~~a~~la~~G~~vi~~D~~ 80 (175)
.|.|+|+.-.... ...+...+-+.|.+.|+.+..++..
T Consensus 31 ~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~ 70 (233)
T PRK05282 31 RRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRV 70 (233)
T ss_pred CCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccc
Confidence 4668888854422 1234555777888889998887753
No 387
>PRK13230 nitrogenase reductase-like protein; Reviewed
Probab=29.56 E-value=84 Score=24.43 Aligned_cols=26 Identities=19% Similarity=0.119 Sum_probs=21.1
Q ss_pred chHHHHHHHHHhCCCEEEeccCC-CCC
Q 030535 58 PLFRKLADKVAGAGFLVVAPDFF-YGD 83 (175)
Q Consensus 58 ~~~~~~a~~la~~G~~vi~~D~~-~g~ 83 (175)
..-..+|..|+++|++|+.+|+- .++
T Consensus 16 T~a~nLA~~La~~G~rVLliD~Dpq~n 42 (279)
T PRK13230 16 TTVCNIAAALAESGKKVLVVGCDPKAD 42 (279)
T ss_pred HHHHHHHHHHHhCCCEEEEEeeCCccc
Confidence 34567899999999999999986 543
No 388
>PRK07326 short chain dehydrogenase; Provisional
Probab=29.52 E-value=82 Score=23.29 Aligned_cols=30 Identities=17% Similarity=0.169 Sum_probs=21.5
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEecc
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPD 78 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D 78 (175)
.+++.|+.|. .-..++++|+++|+.|+..+
T Consensus 8 ~ilItGatg~---iG~~la~~l~~~g~~V~~~~ 37 (237)
T PRK07326 8 VALITGGSKG---IGFAIAEALLAEGYKVAITA 37 (237)
T ss_pred EEEEECCCCc---HHHHHHHHHHHCCCEEEEee
Confidence 4555666553 23578899999999999887
No 389
>PRK08703 short chain dehydrogenase; Provisional
Probab=29.39 E-value=1.1e+02 Score=22.82 Aligned_cols=31 Identities=23% Similarity=0.167 Sum_probs=22.0
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
.+++.|+.+. .-..+++.|+++|+.|+..+.
T Consensus 8 ~vlItG~sgg---iG~~la~~l~~~g~~V~~~~r 38 (239)
T PRK08703 8 TILVTGASQG---LGEQVAKAYAAAGATVILVAR 38 (239)
T ss_pred EEEEECCCCc---HHHHHHHHHHHcCCEEEEEeC
Confidence 4555565443 235789999999999998773
No 390
>TIGR01753 flav_short flavodoxin, short chain. Flavodoxins are small redox-active proteins with a flavin mononucleotide (FMN) prosthetic group. They can act in nitrogen fixation by nitrogenase, in sulfite reduction, and light-dependent NADP+ reduction in during photosynthesis, among other roles. This model describes the short chain type. Many of these are involved in sulfite reduction.
Probab=29.24 E-value=1.8e+02 Score=19.49 Aligned_cols=37 Identities=24% Similarity=0.407 Sum_probs=19.5
Q ss_pred CeEEEEecCCCCCC-cchHHHHHHHHHhCCCEEEeccC
Q 030535 43 KSAILLISDVFGYE-APLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 43 ~~~vv~lhg~~g~~-~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
++..+|..++++.. ......+.+.|.+.|+.++...+
T Consensus 81 k~~~vfgt~g~~~~f~~~~~~~~~~l~~~g~~~v~~~~ 118 (140)
T TIGR01753 81 KKVALFGSGDWGYEFCEAVDDWEERLKEAGATIIAEGL 118 (140)
T ss_pred CEEEEEecCCCCchhhHHHHHHHHHHHHCCCEEecCCe
Confidence 34555555444330 13445566666666777766543
No 391
>PRK05568 flavodoxin; Provisional
Probab=29.21 E-value=1e+02 Score=21.04 Aligned_cols=36 Identities=11% Similarity=0.018 Sum_probs=24.2
Q ss_pred EEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC
Q 030535 45 AILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF 80 (175)
Q Consensus 45 ~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~ 80 (175)
.+|+.+..+|++....+.+++.+.+.|+.|-..|+.
T Consensus 4 ~~IvY~S~~GnT~~~a~~i~~~~~~~g~~v~~~~~~ 39 (142)
T PRK05568 4 INIIYWSGTGNTEAMANLIAEGAKENGAEVKLLNVS 39 (142)
T ss_pred EEEEEECCCchHHHHHHHHHHHHHHCCCeEEEEECC
Confidence 455555567766555566777777778888877764
No 392
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=29.05 E-value=80 Score=20.67 Aligned_cols=31 Identities=32% Similarity=0.433 Sum_probs=22.9
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhC-CCEEEeccC
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGA-GFLVVAPDF 79 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~-G~~vi~~D~ 79 (175)
||++.|-.|.- . ..+++.|+++ |+.++-.|-
T Consensus 1 vI~I~G~~gsG-K--ST~a~~La~~~~~~~i~~d~ 32 (121)
T PF13207_consen 1 VIIISGPPGSG-K--STLAKELAERLGFPVISMDD 32 (121)
T ss_dssp EEEEEESTTSS-H--HHHHHHHHHHHTCEEEEEHH
T ss_pred CEEEECCCCCC-H--HHHHHHHHHHHCCeEEEecc
Confidence 56777666653 2 3578888887 999998886
No 393
>PRK06523 short chain dehydrogenase; Provisional
Probab=28.91 E-value=95 Score=23.41 Aligned_cols=31 Identities=16% Similarity=0.009 Sum_probs=22.7
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
.+++.|+.+. --..+++.|+++|+.|+..+.
T Consensus 11 ~vlItGas~g---IG~~ia~~l~~~G~~v~~~~r 41 (260)
T PRK06523 11 RALVTGGTKG---IGAATVARLLEAGARVVTTAR 41 (260)
T ss_pred EEEEECCCCc---hhHHHHHHHHHCCCEEEEEeC
Confidence 4566666543 225789999999999998874
No 394
>PHA02518 ParA-like protein; Provisional
Probab=28.86 E-value=58 Score=23.76 Aligned_cols=23 Identities=22% Similarity=0.199 Sum_probs=19.2
Q ss_pred chHHHHHHHHHhCCCEEEeccCC
Q 030535 58 PLFRKLADKVAGAGFLVVAPDFF 80 (175)
Q Consensus 58 ~~~~~~a~~la~~G~~vi~~D~~ 80 (175)
..-..+|..|+++|+.|+.+|+-
T Consensus 16 T~a~~la~~la~~g~~vlliD~D 38 (211)
T PHA02518 16 TVATNLASWLHADGHKVLLVDLD 38 (211)
T ss_pred HHHHHHHHHHHhCCCeEEEEeCC
Confidence 34567889999999999999974
No 395
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=28.76 E-value=1.2e+02 Score=23.16 Aligned_cols=32 Identities=13% Similarity=-0.031 Sum_probs=21.2
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEecc
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPD 78 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D 78 (175)
++++.|+.+.. .--..+++.|+++|+.|+..+
T Consensus 10 ~~lITGas~~~-GIG~a~a~~la~~G~~v~~~~ 41 (260)
T PRK06603 10 KGLITGIANNM-SISWAIAQLAKKHGAELWFTY 41 (260)
T ss_pred EEEEECCCCCc-chHHHHHHHHHHcCCEEEEEe
Confidence 55666564321 233578899999999888764
No 396
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=28.75 E-value=68 Score=24.94 Aligned_cols=32 Identities=22% Similarity=0.161 Sum_probs=23.6
Q ss_pred HHHHHHHHhcCCC----eEEEEEEeccHHHHHHhcc
Q 030535 112 KSVIAALKSKGVS----AIGAAGFCWGGVVAAKLAS 143 (175)
Q Consensus 112 ~~~~~~l~~~~~~----~i~v~G~S~GG~ia~~~a~ 143 (175)
..+++.|.++++. .-.+.|-|.|+.++..++.
T Consensus 20 ~GVl~~L~e~g~~l~~~~~~i~G~SAGAl~aa~~a~ 55 (249)
T cd07220 20 VGVASCLLEHAPFLVANARKIYGASAGALTATALVT 55 (249)
T ss_pred HHHHHHHHhcCCcccccCCeEEEEcHHHHHHHHHHc
Confidence 4567777776532 3468899999999998774
No 397
>cd07020 Clp_protease_NfeD_1 Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentially c
Probab=28.74 E-value=2.3e+02 Score=20.63 Aligned_cols=32 Identities=13% Similarity=0.049 Sum_probs=20.7
Q ss_pred HHHHHHHhcCCCeEEEE----EEeccHHHHHHhccC
Q 030535 113 SVIAALKSKGVSAIGAA----GFCWGGVVAAKLASS 144 (175)
Q Consensus 113 ~~~~~l~~~~~~~i~v~----G~S~GG~ia~~~a~~ 144 (175)
.+++.+......=|+.+ |++.||...+.++.+
T Consensus 49 ~i~~~l~~~~kPvia~v~~~~G~AasgG~~iala~D 84 (187)
T cd07020 49 EIVQAILASPVPVVVYVYPSGARAASAGTYILLAAH 84 (187)
T ss_pred HHHHHHHhCCCCEEEEEecCCCCchhHHHHHHHhCC
Confidence 44445544432234445 999999999988865
No 398
>PRK08265 short chain dehydrogenase; Provisional
Probab=28.47 E-value=1.1e+02 Score=23.26 Aligned_cols=31 Identities=16% Similarity=0.177 Sum_probs=22.7
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
++++.|+.+. --..+++.|+++|+.|+..|.
T Consensus 8 ~vlItGas~g---IG~~ia~~l~~~G~~V~~~~r 38 (261)
T PRK08265 8 VAIVTGGATL---IGAAVARALVAAGARVAIVDI 38 (261)
T ss_pred EEEEECCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 5566665542 336789999999999998874
No 399
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=28.45 E-value=42 Score=25.48 Aligned_cols=16 Identities=31% Similarity=0.204 Sum_probs=14.2
Q ss_pred HHHHHhCCCEEEeccC
Q 030535 64 ADKVAGAGFLVVAPDF 79 (175)
Q Consensus 64 a~~la~~G~~vi~~D~ 79 (175)
+.+|+++||.|+.+|+
T Consensus 52 ~~~La~~G~~VvGvDl 67 (218)
T PF05724_consen 52 MLWLAEQGHDVVGVDL 67 (218)
T ss_dssp HHHHHHTTEEEEEEES
T ss_pred HHHHHHCCCeEEEEec
Confidence 5678889999999996
No 400
>PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This domain is found in family 53 of the glycosyl hydrolase classification []. These enzymes are endo-1,4- beta-galactanases (3.2.1.89 from EC). The structure of this domain is known [] and has a TIM barrel fold.; GO: 0015926 glucosidase activity; PDB: 1HJQ_A 1HJS_A 1HJU_B 1FHL_A 1FOB_A 2GFT_A 1UR4_B 1UR0_A 1R8L_B 2CCR_A ....
Probab=28.39 E-value=1.8e+02 Score=23.76 Aligned_cols=68 Identities=21% Similarity=0.372 Sum_probs=40.2
Q ss_pred EEEEecCCCCCCcchHHHHHHHHHhCC--CEEEeccCC-CCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhc
Q 030535 45 AILLISDVFGYEAPLFRKLADKVAGAG--FLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK 121 (175)
Q Consensus 45 ~vv~lhg~~g~~~~~~~~~a~~la~~G--~~vi~~D~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~ 121 (175)
+-|++|-..+.+...++.+...|.+.| |.++...|+ +=.. . +.++...++.|.++
T Consensus 170 ~kV~lH~~~~~~~~~~~~~f~~l~~~g~d~DviGlSyYP~w~~---------~-------------l~~l~~~l~~l~~r 227 (332)
T PF07745_consen 170 IKVMLHLANGGDNDLYRWFFDNLKAAGVDFDVIGLSYYPFWHG---------T-------------LEDLKNNLNDLASR 227 (332)
T ss_dssp SEEEEEES-TTSHHHHHHHHHHHHHTTGG-SEEEEEE-STTST-----------------------HHHHHHHHHHHHHH
T ss_pred CcEEEEECCCCchHHHHHHHHHHHhcCCCcceEEEecCCCCcc---------h-------------HHHHHHHHHHHHHH
Confidence 466777555555567889999998876 777777765 1110 1 16677777777776
Q ss_pred CCCeEEE--EEEecc
Q 030535 122 GVSAIGA--AGFCWG 134 (175)
Q Consensus 122 ~~~~i~v--~G~S~G 134 (175)
..++|.| +|+.+.
T Consensus 228 y~K~V~V~Et~yp~t 242 (332)
T PF07745_consen 228 YGKPVMVVETGYPWT 242 (332)
T ss_dssp HT-EEEEEEE---SB
T ss_pred hCCeeEEEecccccc
Confidence 4457777 455555
No 401
>COG0426 FpaA Uncharacterized flavoproteins [Energy production and conversion]
Probab=28.33 E-value=3.6e+02 Score=22.65 Aligned_cols=37 Identities=14% Similarity=0.228 Sum_probs=29.2
Q ss_pred eEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccCC
Q 030535 44 SAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF 80 (175)
Q Consensus 44 ~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~~ 80 (175)
.++|+--..+|+.....+.+++-|.+.|..|...++.
T Consensus 248 ~V~l~Y~smyg~T~~ma~aiaegl~~~gv~v~~~~~~ 284 (388)
T COG0426 248 KVDLIYDSMYGNTEKMAQAIAEGLMKEGVDVEVINLE 284 (388)
T ss_pred eEEEEEecccCCHHHHHHHHHHHhhhcCCceEEEEcc
Confidence 4555554477877677888999999999999999974
No 402
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=28.24 E-value=90 Score=23.24 Aligned_cols=31 Identities=19% Similarity=0.171 Sum_probs=22.5
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
.+++.|+.+.- -..++++|.++|+.|+..+-
T Consensus 7 ~vlItGasg~i---G~~l~~~l~~~G~~V~~~~r 37 (251)
T PRK07231 7 VAIVTGASSGI---GEGIARRFAAEGARVVVTDR 37 (251)
T ss_pred EEEEECCCChH---HHHHHHHHHHCCCEEEEEeC
Confidence 45566665532 35789999999999998873
No 403
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=28.15 E-value=1.1e+02 Score=22.48 Aligned_cols=30 Identities=27% Similarity=0.215 Sum_probs=22.0
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEecc
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPD 78 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D 78 (175)
.+++.|+.+. .-..+++.|.++|+.|+..+
T Consensus 7 ~ilItGasg~---iG~~l~~~l~~~g~~v~~~~ 36 (246)
T PRK05653 7 TALVTGASRG---IGRAIALRLAADGAKVVIYD 36 (246)
T ss_pred EEEEECCCcH---HHHHHHHHHHHCCCEEEEEe
Confidence 4566666543 23678999999999988877
No 404
>PRK07814 short chain dehydrogenase; Provisional
Probab=28.12 E-value=1.1e+02 Score=23.20 Aligned_cols=31 Identities=19% Similarity=0.029 Sum_probs=22.0
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
++++.|+.+. --..+++.|+++|+.|+..+-
T Consensus 12 ~vlItGasgg---IG~~~a~~l~~~G~~Vi~~~r 42 (263)
T PRK07814 12 VAVVTGAGRG---LGAAIALAFAEAGADVLIAAR 42 (263)
T ss_pred EEEEECCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 4566666442 235789999999999988773
No 405
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=28.10 E-value=71 Score=26.73 Aligned_cols=32 Identities=25% Similarity=0.260 Sum_probs=26.2
Q ss_pred HHHHHHHHhcCCCeEEEEEEeccHHHHHHhcc
Q 030535 112 KSVIAALKSKGVSAIGAAGFCWGGVVAAKLAS 143 (175)
Q Consensus 112 ~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a~ 143 (175)
..+++.|.+.+..+=.+.|-|.|+.++..+|.
T Consensus 99 ~Gv~kaL~e~gl~p~~i~GtS~Gaivaa~~a~ 130 (391)
T cd07229 99 LGVVKALWLRGLLPRIITGTATGALIAALVGV 130 (391)
T ss_pred HHHHHHHHHcCCCCceEEEecHHHHHHHHHHc
Confidence 35778888888665579999999999999874
No 406
>PRK07035 short chain dehydrogenase; Provisional
Probab=28.07 E-value=1.1e+02 Score=22.87 Aligned_cols=31 Identities=19% Similarity=0.160 Sum_probs=22.0
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
++++.|+.+. --..++++|+++|++|+..+.
T Consensus 10 ~vlItGas~g---IG~~l~~~l~~~G~~Vi~~~r 40 (252)
T PRK07035 10 IALVTGASRG---IGEAIAKLLAQQGAHVIVSSR 40 (252)
T ss_pred EEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 4555555442 336789999999999998884
No 407
>COG2326 Uncharacterized conserved protein [Function unknown]
Probab=28.04 E-value=1.5e+02 Score=23.46 Aligned_cols=38 Identities=11% Similarity=0.152 Sum_probs=28.0
Q ss_pred CCeEEEEecCCCC-CCcchHHHHHHHHHhCCCEEEeccC
Q 030535 42 SKSAILLISDVFG-YEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 42 ~~~~vv~lhg~~g-~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
..+.|++|-|.-. ........+.+.|+-+|++|+++--
T Consensus 72 ~~~vvivfEGrDAAGKgG~Ikri~~~lNPR~~rvval~a 110 (270)
T COG2326 72 GQRVVIVFEGRDAAGKGGAIKRITEALNPRGARVVALPA 110 (270)
T ss_pred CCeEEEEEecccccCCCchhHHHhhhcCCceeEEeecCC
Confidence 4567777775432 3345688999999999999999763
No 408
>COG4425 Predicted membrane protein [Function unknown]
Probab=27.98 E-value=2.4e+02 Score=24.42 Aligned_cols=32 Identities=9% Similarity=-0.039 Sum_probs=23.2
Q ss_pred hHHHHHHHHHHhcC---CCeEEEEEEeccHHHHHH
Q 030535 109 VDAKSVIAALKSKG---VSAIGAAGFCWGGVVAAK 140 (175)
Q Consensus 109 ~d~~~~~~~l~~~~---~~~i~v~G~S~GG~ia~~ 140 (175)
.-++++.++..... -.|+.+.|-|.|++-...
T Consensus 379 aLf~aVy~yw~qLP~~sRPKLylhG~SLGa~~s~~ 413 (588)
T COG4425 379 ALFEAVYGYWTQLPKSSRPKLYLHGESLGAMGSEA 413 (588)
T ss_pred HHHHHHHHHHHhCCcCCCCceEEeccccccccCcc
Confidence 44566667776653 248999999999887766
No 409
>TIGR01508 rib_reduct_arch 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1'-reductase, archaeal. in riboflavin biosynthesis is reduced first, and then deaminated, in both Archaea and Fungi, opposite the order in Bacteria. The subsequent deaminase is not presently known and is not closely homologous to the deaminase domain (3.5.4.26) fused to the reductase domain (1.1.1.193) similar to this protein but found in most bacteria.
Probab=27.89 E-value=2.2e+02 Score=21.25 Aligned_cols=39 Identities=26% Similarity=0.371 Sum_probs=29.1
Q ss_pred HHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhccCCCccEEE
Q 030535 110 DAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSHDIQAAV 151 (175)
Q Consensus 110 d~~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a~~~~v~~~v 151 (175)
|+..+++.|++++..++.+-| ||.++..+.....++-+.
T Consensus 124 dl~~~l~~L~~~g~~~vlveG---G~~l~~~fl~~~LvDel~ 162 (210)
T TIGR01508 124 DLKKLLDILYDKGVRRLMVEG---GGTLIWSLFKENLVDEIS 162 (210)
T ss_pred CHHHHHHHHHHCCCCEEEEee---CHHHHHHHHHCCCCcEEE
Confidence 677888889888888998887 777777766555555544
No 410
>PHA02519 plasmid partition protein SopA; Reviewed
Probab=27.84 E-value=1e+02 Score=25.58 Aligned_cols=21 Identities=19% Similarity=-0.069 Sum_probs=18.4
Q ss_pred hHHHHHHHHHhCCCEEEeccC
Q 030535 59 LFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 59 ~~~~~a~~la~~G~~vi~~D~ 79 (175)
.-..+|..|+.+|++|+++|+
T Consensus 123 ta~nLA~~LA~~G~rVLlIDl 143 (387)
T PHA02519 123 SAVHTAQWLALQGHRVLLIEG 143 (387)
T ss_pred HHHHHHHHHHhCCCcEEEEeC
Confidence 456789999999999999995
No 411
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=27.76 E-value=2.4e+02 Score=25.01 Aligned_cols=39 Identities=23% Similarity=0.120 Sum_probs=27.5
Q ss_pred CCeEEEEecCCCCC--CcchHHHHHHHHHhCCCEEEeccCC
Q 030535 42 SKSAILLISDVFGY--EAPLFRKLADKVAGAGFLVVAPDFF 80 (175)
Q Consensus 42 ~~~~vv~lhg~~g~--~~~~~~~~a~~la~~G~~vi~~D~~ 80 (175)
-+.+++++||-... ..+....+.+.|..+|..|-..=++
T Consensus 550 i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p 590 (620)
T COG1506 550 IKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFP 590 (620)
T ss_pred cCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeC
Confidence 44679999976642 2345677888999899876665554
No 412
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=27.75 E-value=1.1e+02 Score=22.93 Aligned_cols=31 Identities=19% Similarity=0.260 Sum_probs=22.2
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
.+++.|+.+. --..+++.|+++|+.|+..|.
T Consensus 8 ~vlItGas~~---iG~~ia~~l~~~G~~v~~~~r 38 (257)
T PRK07067 8 VALLTGAASG---IGEAVAERYLAEGARVVIADI 38 (257)
T ss_pred EEEEeCCCch---HHHHHHHHHHHcCCEEEEEcC
Confidence 4556655543 236789999999999988773
No 413
>PRK07024 short chain dehydrogenase; Provisional
Probab=27.65 E-value=1.1e+02 Score=23.07 Aligned_cols=31 Identities=16% Similarity=0.025 Sum_probs=22.4
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
.+++.|+.+. --..+++.|+++|+.|+..|.
T Consensus 4 ~vlItGas~g---IG~~la~~l~~~G~~v~~~~r 34 (257)
T PRK07024 4 KVFITGASSG---IGQALAREYARQGATLGLVAR 34 (257)
T ss_pred EEEEEcCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 4556655542 336789999999999998874
No 414
>PRK05876 short chain dehydrogenase; Provisional
Probab=27.52 E-value=1.1e+02 Score=23.57 Aligned_cols=31 Identities=19% Similarity=-0.001 Sum_probs=21.9
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
++++.|+.+. --..+++.|+++|+.|+..|.
T Consensus 8 ~vlVTGas~g---IG~ala~~La~~G~~Vv~~~r 38 (275)
T PRK05876 8 GAVITGGASG---IGLATGTEFARRGARVVLGDV 38 (275)
T ss_pred EEEEeCCCch---HHHHHHHHHHHCCCEEEEEeC
Confidence 4566655542 236789999999999987763
No 415
>PF03698 UPF0180: Uncharacterised protein family (UPF0180); InterPro: IPR005370 The members of this family are small uncharacterised proteins.
Probab=27.41 E-value=69 Score=20.38 Aligned_cols=21 Identities=14% Similarity=0.234 Sum_probs=18.1
Q ss_pred hHHHHHHHHHhCCCEEEeccC
Q 030535 59 LFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 59 ~~~~~a~~la~~G~~vi~~D~ 79 (175)
.+..+.+.|.++||.|+.++-
T Consensus 9 ~Ls~v~~~L~~~GyeVv~l~~ 29 (80)
T PF03698_consen 9 GLSNVKEALREKGYEVVDLEN 29 (80)
T ss_pred CchHHHHHHHHCCCEEEecCC
Confidence 466789999999999999884
No 416
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=27.31 E-value=1.3e+02 Score=23.17 Aligned_cols=32 Identities=19% Similarity=0.078 Sum_probs=21.8
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEecc
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPD 78 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D 78 (175)
++++-|+.+.. .--..+++.|+++|+.|+..+
T Consensus 9 ~~lVTGas~~~-GIG~aiA~~la~~Ga~V~~~~ 40 (271)
T PRK06505 9 RGLIMGVANDH-SIAWGIAKQLAAQGAELAFTY 40 (271)
T ss_pred EEEEeCCCCCC-cHHHHHHHHHHhCCCEEEEec
Confidence 55566554311 234678999999999998865
No 417
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=27.16 E-value=1.2e+02 Score=22.69 Aligned_cols=31 Identities=23% Similarity=0.222 Sum_probs=22.6
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
.+++.|+.+. --..++++|.++|+.|+..+.
T Consensus 6 ~vlItG~sg~---iG~~la~~l~~~g~~v~~~~r 36 (258)
T PRK12429 6 VALVTGAASG---IGLEIALALAKEGAKVVIADL 36 (258)
T ss_pred EEEEECCCch---HHHHHHHHHHHCCCeEEEEeC
Confidence 4566666553 236789999999999988774
No 418
>PRK08643 acetoin reductase; Validated
Probab=27.15 E-value=1.2e+02 Score=22.77 Aligned_cols=31 Identities=19% Similarity=0.280 Sum_probs=21.7
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
++++.|+.+. .-..+++.|+++|+.|+..+.
T Consensus 4 ~~lItGas~g---iG~~la~~l~~~G~~v~~~~r 34 (256)
T PRK08643 4 VALVTGAGQG---IGFAIAKRLVEDGFKVAIVDY 34 (256)
T ss_pred EEEEECCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 4455555443 235789999999999988874
No 419
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=27.13 E-value=69 Score=26.89 Aligned_cols=32 Identities=28% Similarity=0.244 Sum_probs=25.8
Q ss_pred HHHHHHHHhcCCCeEEEEEEeccHHHHHHhcc
Q 030535 112 KSVIAALKSKGVSAIGAAGFCWGGVVAAKLAS 143 (175)
Q Consensus 112 ~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a~ 143 (175)
..+++.|.+++...=.+.|-|.|+.++..++.
T Consensus 83 ~GVlkaL~e~gllp~iI~GtSAGAivaalla~ 114 (407)
T cd07232 83 FGVVKALLDADLLPNVISGTSGGSLVAALLCT 114 (407)
T ss_pred HHHHHHHHhCCCCCCEEEEECHHHHHHHHHHc
Confidence 46777888877655579999999999998874
No 420
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=27.12 E-value=1.3e+02 Score=23.09 Aligned_cols=32 Identities=13% Similarity=0.081 Sum_probs=21.2
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEecc
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPD 78 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D 78 (175)
++++.|+.+.. .--..+++.|+++|+.|+..+
T Consensus 8 ~~lITGas~~~-GIG~aia~~la~~G~~vil~~ 39 (262)
T PRK07984 8 RILVTGVASKL-SIAYGIAQAMHREGAELAFTY 39 (262)
T ss_pred EEEEeCCCCCc-cHHHHHHHHHHHCCCEEEEEe
Confidence 45566554321 233678999999999988765
No 421
>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function. One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].
Probab=27.12 E-value=1e+02 Score=24.76 Aligned_cols=31 Identities=29% Similarity=0.417 Sum_probs=22.9
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEecc
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPD 78 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D 78 (175)
||++.|... ....+.++..|.++||.|++--
T Consensus 5 vVvI~Gs~~--~PltR~la~DLeRRGFIV~v~~ 35 (299)
T PF08643_consen 5 VVVIAGSPH--DPLTRSLALDLERRGFIVYVTV 35 (299)
T ss_pred EEEEECCCC--CccHHHHHHHHhhCCeEEEEEe
Confidence 555554432 2677899999999999999854
No 422
>COG1832 Predicted CoA-binding protein [General function prediction only]
Probab=27.09 E-value=1.4e+02 Score=21.16 Aligned_cols=28 Identities=11% Similarity=0.109 Sum_probs=20.6
Q ss_pred CCCCCCcchHHHHHHHHHhCCCEEEecc
Q 030535 51 DVFGYEAPLFRKLADKVAGAGFLVVAPD 78 (175)
Q Consensus 51 g~~g~~~~~~~~~a~~la~~G~~vi~~D 78 (175)
|........-..++++|.++||.|+=.+
T Consensus 23 G~S~~P~r~sy~V~kyL~~~GY~ViPVN 50 (140)
T COG1832 23 GASDKPDRPSYRVAKYLQQKGYRVIPVN 50 (140)
T ss_pred ecCCCCCccHHHHHHHHHHCCCEEEeeC
Confidence 4544333344679999999999999888
No 423
>PRK06194 hypothetical protein; Provisional
Probab=27.06 E-value=1.2e+02 Score=23.37 Aligned_cols=31 Identities=19% Similarity=0.145 Sum_probs=22.2
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
.+++.|+.+. --..+++.|+++|+.|+..|.
T Consensus 8 ~vlVtGasgg---IG~~la~~l~~~G~~V~~~~r 38 (287)
T PRK06194 8 VAVITGAASG---FGLAFARIGAALGMKLVLADV 38 (287)
T ss_pred EEEEeCCccH---HHHHHHHHHHHCCCEEEEEeC
Confidence 4556666543 235789999999999998874
No 424
>COG0518 GuaA GMP synthase - Glutamine amidotransferase domain [Nucleotide transport and metabolism]
Probab=27.04 E-value=1.7e+02 Score=21.87 Aligned_cols=32 Identities=25% Similarity=0.320 Sum_probs=23.5
Q ss_pred HHHHHHHHHhcCCCeEEEEEEeccHHHHHHhc
Q 030535 111 AKSVIAALKSKGVSAIGAAGFCWGGVVAAKLA 142 (175)
Q Consensus 111 ~~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a 142 (175)
+....+++.+.+....=++|.|+|..+.....
T Consensus 65 ~~~~~~~i~~~~~p~~pvLGIC~G~Ql~A~~l 96 (198)
T COG0518 65 LPREKDLIKDAGVPGKPVLGICLGHQLLAKAL 96 (198)
T ss_pred chhHHHHHHHhCCCCCCEEEEChhHHHHHHHh
Confidence 66677777766544446999999998887743
No 425
>PRK10425 DNase TatD; Provisional
Probab=26.92 E-value=1.4e+02 Score=23.17 Aligned_cols=50 Identities=22% Similarity=0.194 Sum_probs=40.5
Q ss_pred hHHHHHHHHHHhcCCCeEEEEEEeccHHHHHH-hcc-CCCccEEEEecCCCC
Q 030535 109 VDAKSVIAALKSKGVSAIGAAGFCWGGVVAAK-LAS-SHDIQAAVVLHPGAI 158 (175)
Q Consensus 109 ~d~~~~~~~l~~~~~~~i~v~G~S~GG~ia~~-~a~-~~~v~~~v~~~p~~~ 158 (175)
.|...+++..++.+..++.++|.+........ ++. .+.+...+.+||...
T Consensus 15 ~d~~~vl~~a~~~gv~~~i~~~~~~~~~~~~~~l~~~~~~v~~~~GiHP~~~ 66 (258)
T PRK10425 15 KDRDDVVARAFAAGVNGMLITGTNLRESQQAQKLARQYPSCWSTAGVHPHDS 66 (258)
T ss_pred ccHHHHHHHHHHCCCCEEEEeCCCHHHHHHHHHHHHhCCCEEEEEEeCcCcc
Confidence 67888888888888889999999988877554 664 367899999999765
No 426
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=26.91 E-value=1.3e+02 Score=23.26 Aligned_cols=32 Identities=16% Similarity=0.006 Sum_probs=21.5
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEecc
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPD 78 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D 78 (175)
++++.|+.... .--..+++.|+++|+.|+..+
T Consensus 7 ~~lItGas~~~-GIG~aiA~~la~~G~~Vil~~ 38 (274)
T PRK08415 7 KGLIVGVANNK-SIAYGIAKACFEQGAELAFTY 38 (274)
T ss_pred EEEEECCCCCC-CHHHHHHHHHHHCCCEEEEEe
Confidence 55666554211 234678999999999988765
No 427
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=26.75 E-value=1.3e+02 Score=22.70 Aligned_cols=33 Identities=12% Similarity=0.185 Sum_probs=22.7
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
.+++.|+.+.. .--..+++.|+++|+.|+..+.
T Consensus 7 ~vlItGas~~~-giG~~la~~l~~~G~~vi~~~r 39 (256)
T PRK12748 7 IALVTGASRLN-GIGAAVCRRLAAKGIDIFFTYW 39 (256)
T ss_pred EEEEeCCCCCC-CHHHHHHHHHHHcCCcEEEEcC
Confidence 45666665321 2335689999999999998864
No 428
>COG1058 CinA Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA [General function prediction only]
Probab=26.68 E-value=2.4e+02 Score=22.13 Aligned_cols=21 Identities=19% Similarity=0.082 Sum_probs=16.6
Q ss_pred chHHHHHHHHHhCCCEEEecc
Q 030535 58 PLFRKLADKVAGAGFLVVAPD 78 (175)
Q Consensus 58 ~~~~~~a~~la~~G~~vi~~D 78 (175)
.+..++++.|.++|+.+...-
T Consensus 21 tNa~~la~~L~~~G~~v~~~~ 41 (255)
T COG1058 21 TNAAFLADELTELGVDLARIT 41 (255)
T ss_pred chHHHHHHHHHhcCceEEEEE
Confidence 356889999999998776644
No 429
>COG0635 HemN Coproporphyrinogen III oxidase and related Fe-S oxidoreductases [Coenzyme metabolism]
Probab=26.64 E-value=2.5e+02 Score=23.64 Aligned_cols=55 Identities=16% Similarity=0.191 Sum_probs=40.1
Q ss_pred hHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcCCCeEEEEEEec
Q 030535 59 LFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCW 133 (175)
Q Consensus 59 ~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~v~G~S~ 133 (175)
......+.+.+.|+.-+-+|+-+|-|. + +. +++...++.+.+.++++|.+.+...
T Consensus 174 ~~~~a~~~~~~~g~~~in~DLIyglP~-Q------T~-------------~~~~~~l~~a~~l~pdhis~y~L~~ 228 (416)
T COG0635 174 EAKEAVELARKAGFTSINIDLIYGLPG-Q------TL-------------ESLKEDLEQALELGPDHLSLYSLAI 228 (416)
T ss_pred HHHHHHHHHHHcCCCcEEEEeecCCCC-C------CH-------------HHHHHHHHHHHhCCCCEEEEeeeec
Confidence 345566667777999999999888766 1 11 5666777777777888999888764
No 430
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=26.52 E-value=1.5e+02 Score=21.38 Aligned_cols=45 Identities=18% Similarity=0.160 Sum_probs=24.5
Q ss_pred hHHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhcc-C-CCccEEEEec
Q 030535 109 VDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLAS-S-HDIQAAVVLH 154 (175)
Q Consensus 109 ~d~~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a~-~-~~v~~~v~~~ 154 (175)
+++.+.++.+++.+ .+|+++|-|-.|.+-+.+.. . ..|..++=.+
T Consensus 55 ~~l~~~L~~~~~~g-k~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~n 101 (160)
T PF08484_consen 55 AELREFLEKLKAEG-KRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDN 101 (160)
T ss_dssp HHHHHHHHHHHHTT---EEEE---SHHHHHHHHHT--TTTS--EEES-
T ss_pred HHHHHHHHHHHHcC-CEEEEECcchHHHHHHHHhCCCcceeEEEEeCC
Confidence 55666666666544 68999999999988887663 2 3477776433
No 431
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=26.44 E-value=1.3e+02 Score=22.65 Aligned_cols=31 Identities=23% Similarity=0.129 Sum_probs=22.1
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
++++.|+.+. --..+++.|+++|+.|+..+.
T Consensus 11 ~~lItGas~g---iG~~ia~~L~~~G~~vvl~~r 41 (254)
T PRK08085 11 NILITGSAQG---IGFLLATGLAEYGAEIIINDI 41 (254)
T ss_pred EEEEECCCCh---HHHHHHHHHHHcCCEEEEEcC
Confidence 4556655442 336789999999999998874
No 432
>PRK08226 short chain dehydrogenase; Provisional
Probab=26.41 E-value=1.3e+02 Score=22.76 Aligned_cols=31 Identities=19% Similarity=0.154 Sum_probs=22.0
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
.+++.|+.+. --..+++.|+++|+.|+..+.
T Consensus 8 ~~lItG~s~g---iG~~la~~l~~~G~~Vv~~~r 38 (263)
T PRK08226 8 TALITGALQG---IGEGIARVFARHGANLILLDI 38 (263)
T ss_pred EEEEeCCCCh---HHHHHHHHHHHCCCEEEEecC
Confidence 4556666543 235789999999999988773
No 433
>cd02037 MRP-like MRP (Multiple Resistance and pH adaptation) is a homologue of the Fer4_NifH superfamily. Like the other members of the superfamily, MRP contains a ATP-binding domain at the N-termini. It is found in bacteria as a membrane-spanning protein and functions as a Na+/H+ antiporter.
Probab=26.40 E-value=79 Score=22.41 Aligned_cols=22 Identities=27% Similarity=0.098 Sum_probs=18.6
Q ss_pred hHHHHHHHHHhCCCEEEeccCC
Q 030535 59 LFRKLADKVAGAGFLVVAPDFF 80 (175)
Q Consensus 59 ~~~~~a~~la~~G~~vi~~D~~ 80 (175)
.-..+|..|++.|++|+..|.-
T Consensus 16 ~a~~LA~~la~~g~~vllvD~D 37 (169)
T cd02037 16 VAVNLALALAKLGYKVGLLDAD 37 (169)
T ss_pred HHHHHHHHHHHcCCcEEEEeCC
Confidence 4567899999999999999974
No 434
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=26.35 E-value=1.3e+02 Score=22.57 Aligned_cols=31 Identities=23% Similarity=0.177 Sum_probs=22.1
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
++++-|+.+. .-..++++|+++|+.|+..+.
T Consensus 4 ~vlItG~sg~---iG~~la~~L~~~g~~vi~~~r 34 (256)
T PRK12745 4 VALVTGGRRG---IGLGIARALAAAGFDLAINDR 34 (256)
T ss_pred EEEEeCCCch---HHHHHHHHHHHCCCEEEEEec
Confidence 4556655442 335789999999999988874
No 435
>PRK06114 short chain dehydrogenase; Provisional
Probab=26.31 E-value=1.3e+02 Score=22.73 Aligned_cols=31 Identities=19% Similarity=0.143 Sum_probs=21.7
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
++++.|+.+. --..+++.|+++|+.|+..+.
T Consensus 10 ~~lVtG~s~g---IG~~ia~~l~~~G~~v~~~~r 40 (254)
T PRK06114 10 VAFVTGAGSG---IGQRIAIGLAQAGADVALFDL 40 (254)
T ss_pred EEEEECCCch---HHHHHHHHHHHCCCEEEEEeC
Confidence 4455555442 336789999999999998774
No 436
>PF02142 MGS: MGS-like domain This is a subfamily of this family; InterPro: IPR011607 This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. The known structures in this domain show a common phosphate binding site []. ; PDB: 4A1O_A 3ZZM_A 1ZCZ_A 1M6V_C 1CS0_C 1C30_E 1C3O_G 1BXR_A 1T36_E 1A9X_A ....
Probab=26.21 E-value=88 Score=20.04 Aligned_cols=19 Identities=32% Similarity=0.496 Sum_probs=15.0
Q ss_pred HHHHHHHHHhCCCEEEecc
Q 030535 60 FRKLADKVAGAGFLVVAPD 78 (175)
Q Consensus 60 ~~~~a~~la~~G~~vi~~D 78 (175)
+..+++.|.+.||.+++=.
T Consensus 2 ~~~~a~~l~~lG~~i~AT~ 20 (95)
T PF02142_consen 2 IVPLAKRLAELGFEIYATE 20 (95)
T ss_dssp HHHHHHHHHHTTSEEEEEH
T ss_pred HHHHHHHHHHCCCEEEECh
Confidence 4578889999999888844
No 437
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=26.05 E-value=1.3e+02 Score=22.65 Aligned_cols=31 Identities=23% Similarity=0.203 Sum_probs=22.1
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
++++-|+.+. --..+++.|+++|+.|+..|.
T Consensus 10 ~vlVtGas~g---IG~~la~~l~~~G~~v~~~~r 40 (260)
T PRK12823 10 VVVVTGAAQG---IGRGVALRAAAEGARVVLVDR 40 (260)
T ss_pred EEEEeCCCch---HHHHHHHHHHHCCCEEEEEeC
Confidence 4555555543 235789999999999998874
No 438
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=25.91 E-value=1.2e+02 Score=24.74 Aligned_cols=31 Identities=35% Similarity=0.461 Sum_probs=23.0
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
.|++. |++...-..+|.+|.++||.|++=-+
T Consensus 31 ~VlIT---GCDSGfG~~LA~~L~~~Gf~V~Agcl 61 (322)
T KOG1610|consen 31 AVLIT---GCDSGFGRLLAKKLDKKGFRVFAGCL 61 (322)
T ss_pred EEEEe---cCCcHHHHHHHHHHHhcCCEEEEEee
Confidence 55665 44444457899999999999998664
No 439
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=25.90 E-value=1.1e+02 Score=20.33 Aligned_cols=22 Identities=27% Similarity=0.469 Sum_probs=18.3
Q ss_pred cchHHHHHHHHHhCCCEEEecc
Q 030535 57 APLFRKLADKVAGAGFLVVAPD 78 (175)
Q Consensus 57 ~~~~~~~a~~la~~G~~vi~~D 78 (175)
.+.+..+++.|.+.||.+++-.
T Consensus 11 K~~~~~~a~~l~~~G~~i~AT~ 32 (112)
T cd00532 11 KAMLVDLAPKLSSDGFPLFATG 32 (112)
T ss_pred HHHHHHHHHHHHHCCCEEEECc
Confidence 3678899999999999998743
No 440
>PRK05693 short chain dehydrogenase; Provisional
Probab=25.90 E-value=1.3e+02 Score=23.02 Aligned_cols=30 Identities=33% Similarity=0.392 Sum_probs=21.6
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEecc
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPD 78 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D 78 (175)
++++.|+.+. .-..+++.|+++|+.|+..+
T Consensus 3 ~vlItGasgg---iG~~la~~l~~~G~~V~~~~ 32 (274)
T PRK05693 3 VVLITGCSSG---IGRALADAFKAAGYEVWATA 32 (274)
T ss_pred EEEEecCCCh---HHHHHHHHHHHCCCEEEEEe
Confidence 4556655442 33678999999999998876
No 441
>COG0062 Uncharacterized conserved protein [Function unknown]
Probab=25.89 E-value=1.5e+02 Score=22.38 Aligned_cols=36 Identities=17% Similarity=0.103 Sum_probs=25.9
Q ss_pred CeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 43 KSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 43 ~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
.+-|+++- |.|++...-.-.|++|..+||.|-.+-.
T Consensus 49 ~~~v~vlc-G~GnNGGDG~VaAR~L~~~G~~V~v~~~ 84 (203)
T COG0062 49 ARRVLVLC-GPGNNGGDGLVAARHLKAAGYAVTVLLL 84 (203)
T ss_pred CCEEEEEE-CCCCccHHHHHHHHHHHhCCCceEEEEe
Confidence 34466676 5555555666789999999998888664
No 442
>cd06259 YdcF-like YdcF-like. YdcF-like is a large family of mainly bacterial proteins, with a few members found in fungi, plants, and archaea. Escherichia coli YdcF has been shown to bind S-adenosyl-L-methionine (AdoMet), but a biochemical function has not been idenitified. The family also includes Escherichia coli sanA and Salmonella typhimurium sfiX, which are involved in vancomycin resistance; sfiX may also be involved in murein synthesis.
Probab=25.78 E-value=2.3e+02 Score=19.48 Aligned_cols=34 Identities=12% Similarity=0.090 Sum_probs=24.5
Q ss_pred hHHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhc
Q 030535 109 VDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLA 142 (175)
Q Consensus 109 ~d~~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a 142 (175)
+.+..+.+++++.+..++.++-..+=-.=+..+.
T Consensus 81 ena~~~~~~~~~~~~~~i~lVTs~~H~~Ra~~~~ 114 (150)
T cd06259 81 ENARFSAELLRERGIRSVLLVTSAYHMPRALLIF 114 (150)
T ss_pred HHHHHHHHHHHhcCCCeEEEECCHHHHHHHHHHH
Confidence 6678888899888888999998775444444433
No 443
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=25.63 E-value=1.3e+02 Score=22.11 Aligned_cols=31 Identities=19% Similarity=0.050 Sum_probs=21.6
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
.+++.|+.+. .-..+++.|+++|+.|+..+-
T Consensus 7 ~~lVtGas~~---iG~~ia~~l~~~G~~v~~~~r 37 (235)
T PRK06550 7 TVLITGAASG---IGLAQARAFLAQGAQVYGVDK 37 (235)
T ss_pred EEEEcCCCch---HHHHHHHHHHHCCCEEEEEeC
Confidence 4555555442 336789999999999988774
No 444
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=25.59 E-value=2e+02 Score=18.71 Aligned_cols=67 Identities=13% Similarity=-0.077 Sum_probs=38.3
Q ss_pred hHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCC----cchhHHHHHHHHHHhc-CCCeEEEEEEe
Q 030535 59 LFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTD----KGYVDAKSVIAALKSK-GVSAIGAAGFC 132 (175)
Q Consensus 59 ~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~d~~~~~~~l~~~-~~~~i~v~G~S 132 (175)
.-.++.+.|.++|..++..-..... ....+.+.+..+.+. +...-...+.++++++ +..++.++|..
T Consensus 18 ga~e~l~~L~~~g~~~~~lTNns~~-------s~~~~~~~L~~~Gi~~~~~~i~ts~~~~~~~l~~~~~~~~v~vlG~~ 89 (101)
T PF13344_consen 18 GAVEALDALRERGKPVVFLTNNSSR-------SREEYAKKLKKLGIPVDEDEIITSGMAAAEYLKEHKGGKKVYVLGSD 89 (101)
T ss_dssp THHHHHHHHHHTTSEEEEEES-SSS--------HHHHHHHHHHTTTT--GGGEEEHHHHHHHHHHHHTTSSEEEEES-H
T ss_pred CHHHHHHHHHHcCCCEEEEeCCCCC-------CHHHHHHHHHhcCcCCCcCEEEChHHHHHHHHHhcCCCCEEEEEcCH
Confidence 3456777788888777766532111 112233334444443 3333447788888884 56799999876
No 445
>TIGR01007 eps_fam capsular exopolysaccharide family. This model describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis(EPS). Atleast 13 genes espA to espM in streptococcus species seem to direct the EPS proteins and all of which share high homology. Functional roles were characterized by gene disruption experiments which resulted in exopolysaccharide-deficient phenotypes.
Probab=25.48 E-value=1.4e+02 Score=21.91 Aligned_cols=22 Identities=23% Similarity=0.070 Sum_probs=18.8
Q ss_pred hHHHHHHHHHhCCCEEEeccCC
Q 030535 59 LFRKLADKVAGAGFLVVAPDFF 80 (175)
Q Consensus 59 ~~~~~a~~la~~G~~vi~~D~~ 80 (175)
.-..+|..|+++|+.|+.+|.-
T Consensus 34 ~a~~LA~~la~~G~rVllID~D 55 (204)
T TIGR01007 34 TSANIAVAFAQAGYKTLLIDGD 55 (204)
T ss_pred HHHHHHHHHHhCCCeEEEEeCC
Confidence 4567899999999999999964
No 446
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=25.42 E-value=76 Score=24.55 Aligned_cols=32 Identities=22% Similarity=0.124 Sum_probs=22.8
Q ss_pred HHHHHHHHhcCC--CeEEEEEEeccHHHHHHhcc
Q 030535 112 KSVIAALKSKGV--SAIGAAGFCWGGVVAAKLAS 143 (175)
Q Consensus 112 ~~~~~~l~~~~~--~~i~v~G~S~GG~ia~~~a~ 143 (175)
..+++.|++++. ..=.+.|-|.|+.++..++.
T Consensus 16 ~GVl~aL~e~g~~~~~d~i~GtSAGAl~aa~~a~ 49 (245)
T cd07218 16 VGVAVCLKKYAPHLLLNKISGASAGALAACCLLC 49 (245)
T ss_pred HHHHHHHHHhCcccCCCeEEEEcHHHHHHHHHHh
Confidence 356667777652 12239999999999998774
No 447
>PF08250 Sperm_act_pep: Sperm-activating peptides; InterPro: IPR013254 The sperm-activating peptides (SAPs) are isolated in egg-conditioned media (egg jelly) of sea urchins. SAPs have several effects on sea urchin spermatozoa: stimulate sperm respiration and motility through intracellular alkalinization, transient elevation of cAMP, cGMP and Ca2+ levels in sperm cells [, ].
Probab=25.39 E-value=18 Score=13.57 Aligned_cols=6 Identities=67% Similarity=1.453 Sum_probs=3.1
Q ss_pred EEeccH
Q 030535 130 GFCWGG 135 (175)
Q Consensus 130 G~S~GG 135 (175)
||++||
T Consensus 1 gf~l~G 6 (10)
T PF08250_consen 1 GFSLGG 6 (10)
T ss_pred Cccccc
Confidence 455554
No 448
>PRK05717 oxidoreductase; Validated
Probab=25.36 E-value=1.3e+02 Score=22.55 Aligned_cols=31 Identities=19% Similarity=0.236 Sum_probs=22.9
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
++++.|+.+. --..+++.|+++|+.|+..|.
T Consensus 12 ~vlItG~sg~---IG~~~a~~l~~~g~~v~~~~~ 42 (255)
T PRK05717 12 VALVTGAARG---IGLGIAAWLIAEGWQVVLADL 42 (255)
T ss_pred EEEEeCCcch---HHHHHHHHHHHcCCEEEEEcC
Confidence 5566666543 236789999999999998874
No 449
>PRK10812 putative DNAse; Provisional
Probab=25.26 E-value=1.9e+02 Score=22.56 Aligned_cols=50 Identities=18% Similarity=0.174 Sum_probs=40.2
Q ss_pred hHHHHHHHHHHhcCCCeEEEEEEeccHHHHHH-hcc-CCCccEEEEecCCCC
Q 030535 109 VDAKSVIAALKSKGVSAIGAAGFCWGGVVAAK-LAS-SHDIQAAVVLHPGAI 158 (175)
Q Consensus 109 ~d~~~~~~~l~~~~~~~i~v~G~S~GG~ia~~-~a~-~~~v~~~v~~~p~~~ 158 (175)
.|...+++..++.|..++.++|.+.....-.. ++. .+.|...+-+||...
T Consensus 20 ~d~~~vl~~a~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~v~~~~GiHP~~~ 71 (265)
T PRK10812 20 KDVDDVLAKAAARDVKFCLAVATTLPGYRHMRDLVGERDNVVFSCGVHPLNQ 71 (265)
T ss_pred cCHHHHHHHHHHcCCCEEEEeCCCHHHHHHHHHHHhhCCCeEEEEEeCCCCC
Confidence 57888888888888999999999987766544 564 367999999999765
No 450
>PLN00200 argininosuccinate synthase; Provisional
Probab=25.19 E-value=2.3e+02 Score=23.85 Aligned_cols=87 Identities=15% Similarity=0.041 Sum_probs=41.8
Q ss_pred CeEEEEecCCCCCCcchHHHHHHHHHhC-CCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCC-cchhHHHHH------
Q 030535 43 KSAILLISDVFGYEAPLFRKLADKVAGA-GFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTD-KGYVDAKSV------ 114 (175)
Q Consensus 43 ~~~vv~lhg~~g~~~~~~~~~a~~la~~-G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~~------ 114 (175)
.+.+|.+.||-.+. -++.+|.++ |+.|+++-...|.+. ................ ..+.|+..-
T Consensus 6 ~kVvva~SGGlDSs-----vla~~L~e~~G~eViav~id~Gq~~----~el~~a~~~A~~lGi~~~~v~dl~~ef~~~~i 76 (404)
T PLN00200 6 NKVVLAYSGGLDTS-----VILKWLRENYGCEVVCFTADVGQGI----EELEGLEAKAKASGAKQLVVKDLREEFVRDYI 76 (404)
T ss_pred CeEEEEEeCCHHHH-----HHHHHHHHhhCCeEEEEEEECCCCh----HHHHHHHHHHHHcCCCEEEEEeCHHHHHHhhc
Confidence 46777787665432 234445455 887777654445321 1112233444444543 233444322
Q ss_pred HHHHHhcC-CCeEEEEEEeccHHHH
Q 030535 115 IAALKSKG-VSAIGAAGFCWGGVVA 138 (175)
Q Consensus 115 ~~~l~~~~-~~~i~v~G~S~GG~ia 138 (175)
...++.+. .++-...+.|.+=.+.
T Consensus 77 ~p~i~~Na~ye~~Y~~~tsl~Rp~i 101 (404)
T PLN00200 77 FPCLRANAIYEGKYLLGTSMARPLI 101 (404)
T ss_pred CHHHHcCCcccceeccccchhhHHH
Confidence 22333332 2556677776554443
No 451
>PRK06101 short chain dehydrogenase; Provisional
Probab=25.18 E-value=1.3e+02 Score=22.44 Aligned_cols=31 Identities=26% Similarity=0.226 Sum_probs=21.9
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
++++-|+.+. .-..+++.|+++|+.|+..+-
T Consensus 3 ~vlItGas~g---iG~~la~~L~~~G~~V~~~~r 33 (240)
T PRK06101 3 AVLITGATSG---IGKQLALDYAKQGWQVIACGR 33 (240)
T ss_pred EEEEEcCCcH---HHHHHHHHHHhCCCEEEEEEC
Confidence 4555555542 336789999999999988773
No 452
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=25.10 E-value=83 Score=25.60 Aligned_cols=31 Identities=26% Similarity=0.260 Sum_probs=24.7
Q ss_pred HHHHHHHHhcCCCeEEEEEEeccHHHHHHhc
Q 030535 112 KSVIAALKSKGVSAIGAAGFCWGGVVAAKLA 142 (175)
Q Consensus 112 ~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a 142 (175)
..+++.+.+.+...=.+.|-|.|+.++..++
T Consensus 84 ~GVlkaL~e~gl~p~~i~GsSaGAivaa~~~ 114 (323)
T cd07231 84 VGVVRTLVEHQLLPRVIAGSSVGSIVCAIIA 114 (323)
T ss_pred HHHHHHHHHcCCCCCEEEEECHHHHHHHHHH
Confidence 3577777787765557999999999998876
No 453
>PRK05904 coproporphyrinogen III oxidase; Provisional
Probab=25.04 E-value=3.3e+02 Score=22.26 Aligned_cols=25 Identities=12% Similarity=0.073 Sum_probs=15.3
Q ss_pred hHHHHHHHHHHhcCCCeEEEEEEec
Q 030535 109 VDAKSVIAALKSKGVSAIGAAGFCW 133 (175)
Q Consensus 109 ~d~~~~~~~l~~~~~~~i~v~G~S~ 133 (175)
+++...++++.+.+++.+.+...+.
T Consensus 170 e~~~~tl~~~~~l~p~~is~y~L~~ 194 (353)
T PRK05904 170 KDLDEVFNFILKHKINHISFYSLEI 194 (353)
T ss_pred HHHHHHHHHHHhcCCCEEEEEeeEe
Confidence 5566666666666666666666553
No 454
>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily. This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.
Probab=24.92 E-value=1.8e+02 Score=18.37 Aligned_cols=28 Identities=14% Similarity=0.183 Sum_probs=17.5
Q ss_pred CCeEEEEecCCCCCCcchHHHHHHHHHhCCCEE
Q 030535 42 SKSAILLISDVFGYEAPLFRKLADKVAGAGFLV 74 (175)
Q Consensus 42 ~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~v 74 (175)
..+.||++..+ .. -...+..|.+.||.+
T Consensus 61 ~~~ivv~C~~G--~r---s~~aa~~L~~~G~~~ 88 (100)
T cd01523 61 DQEVTVICAKE--GS---SQFVAELLAERGYDV 88 (100)
T ss_pred CCeEEEEcCCC--Cc---HHHHHHHHHHcCcee
Confidence 34556655533 22 245788899999983
No 455
>PRK07478 short chain dehydrogenase; Provisional
Probab=24.77 E-value=1.4e+02 Score=22.36 Aligned_cols=30 Identities=23% Similarity=0.160 Sum_probs=21.0
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEecc
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPD 78 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D 78 (175)
++++.|+.+. --..+++.|+++|+.|+..+
T Consensus 8 ~~lItGas~g---iG~~ia~~l~~~G~~v~~~~ 37 (254)
T PRK07478 8 VAIITGASSG---IGRAAAKLFAREGAKVVVGA 37 (254)
T ss_pred EEEEeCCCCh---HHHHHHHHHHHCCCEEEEEe
Confidence 4555555442 23578899999999988876
No 456
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=24.75 E-value=1.4e+02 Score=22.49 Aligned_cols=31 Identities=23% Similarity=0.165 Sum_probs=21.7
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
++++.|+.+ .--..+++.|+++|+.|+..+.
T Consensus 10 ~~lItGas~---gIG~aia~~l~~~G~~vv~~~~ 40 (251)
T PRK12481 10 VAIITGCNT---GLGQGMAIGLAKAGADIVGVGV 40 (251)
T ss_pred EEEEeCCCc---hHHHHHHHHHHHCCCEEEEecC
Confidence 445555543 2346789999999999987763
No 457
>PRK07454 short chain dehydrogenase; Provisional
Probab=24.70 E-value=1.4e+02 Score=22.12 Aligned_cols=31 Identities=19% Similarity=0.021 Sum_probs=21.7
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
.+++.|+.+. .-..+++.|+++|+.|+..+.
T Consensus 8 ~vlItG~sg~---iG~~la~~l~~~G~~V~~~~r 38 (241)
T PRK07454 8 RALITGASSG---IGKATALAFAKAGWDLALVAR 38 (241)
T ss_pred EEEEeCCCch---HHHHHHHHHHHCCCEEEEEeC
Confidence 4455555442 336789999999999998874
No 458
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=24.66 E-value=76 Score=25.60 Aligned_cols=30 Identities=27% Similarity=0.233 Sum_probs=22.0
Q ss_pred HHHHHHHhcC--CCeEEEEEEeccHHHHHHhc
Q 030535 113 SVIAALKSKG--VSAIGAAGFCWGGVVAAKLA 142 (175)
Q Consensus 113 ~~~~~l~~~~--~~~i~v~G~S~GG~ia~~~a 142 (175)
++.+.+.+++ ..+..+.|||+|=..++..+
T Consensus 72 a~~~~l~~~~~~~~p~~~aGHSlGEysAl~~a 103 (310)
T COG0331 72 AAYRVLAEQGLGVKPDFVAGHSLGEYSALAAA 103 (310)
T ss_pred HHHHHHHHhcCCCCCceeecccHhHHHHHHHc
Confidence 3445555544 56789999999999988765
No 459
>PRK06483 dihydromonapterin reductase; Provisional
Probab=24.66 E-value=1.4e+02 Score=22.11 Aligned_cols=31 Identities=19% Similarity=0.027 Sum_probs=21.2
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
.+++.|+.+. --..+++.|+++|+.|+..+.
T Consensus 4 ~vlItGas~g---IG~~ia~~l~~~G~~V~~~~r 34 (236)
T PRK06483 4 PILITGAGQR---IGLALAWHLLAQGQPVIVSYR 34 (236)
T ss_pred eEEEECCCCh---HHHHHHHHHHHCCCeEEEEeC
Confidence 3455555442 236788899999999988774
No 460
>cd01471 vWA_micronemal_protein Micronemal proteins: The Toxoplasma lytic cycle begins when the parasite actively invades a target cell. In association with invasion, T. gondii sequentially discharges three sets of secretory organelles beginning with the micronemes, which contain adhesive proteins involved in parasite attachment to a host cell. Deployed as protein complexes, several micronemal proteins possess vertebrate-derived adhesive sequences that function in binding receptors. The VWA domain likely mediates the protein-protein interactions of these with their interacting partners.
Probab=24.58 E-value=2.3e+02 Score=20.24 Aligned_cols=38 Identities=13% Similarity=0.141 Sum_probs=25.7
Q ss_pred CCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 42 SKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 42 ~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
..+.||++..|.......-...++.+.+.|..++++-+
T Consensus 108 ~~~~villTDG~~~~~~~~~~~a~~l~~~gv~v~~igi 145 (186)
T cd01471 108 APQLVIIMTDGIPDSKFRTLKEARKLRERGVIIAVLGV 145 (186)
T ss_pred CceEEEEEccCCCCCCcchhHHHHHHHHCCCEEEEEEe
Confidence 34678888877654333334578889888988777664
No 461
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=24.56 E-value=99 Score=24.80 Aligned_cols=32 Identities=22% Similarity=0.181 Sum_probs=22.6
Q ss_pred EEEecCCC---CCCcchHHHHHHHHHhCCCEEEecc
Q 030535 46 ILLISDVF---GYEAPLFRKLADKVAGAGFLVVAPD 78 (175)
Q Consensus 46 vv~lhg~~---g~~~~~~~~~a~~la~~G~~vi~~D 78 (175)
|+++|... |.+ .....+++.|+++||.|..+-
T Consensus 3 Il~~~~~~~~gG~e-~~~~~la~~L~~~G~~V~v~~ 37 (392)
T cd03805 3 VAFIHPDLGIGGAE-RLVVDAALALQSRGHEVTIYT 37 (392)
T ss_pred EEEECCCCCCchHH-HHHHHHHHHHHhCCCeEEEEc
Confidence 56666543 332 456789999999999887664
No 462
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=24.53 E-value=1.4e+02 Score=22.56 Aligned_cols=31 Identities=19% Similarity=0.143 Sum_probs=22.2
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
++++.|+.+. --..+++.|+++|+.|+..+.
T Consensus 8 ~vlVtGas~g---IG~~ia~~l~~~G~~V~~~~r 38 (263)
T PRK06200 8 VALITGGGSG---IGRALVERFLAEGARVAVLER 38 (263)
T ss_pred EEEEeCCCch---HHHHHHHHHHHCCCEEEEEeC
Confidence 4566655442 235789999999999988773
No 463
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=24.51 E-value=2.1e+02 Score=21.81 Aligned_cols=39 Identities=21% Similarity=0.211 Sum_probs=25.8
Q ss_pred CCeEEEEecCCCCC---CcchHHHHHHHHHhCCCEEEeccCC
Q 030535 42 SKSAILLISDVFGY---EAPLFRKLADKVAGAGFLVVAPDFF 80 (175)
Q Consensus 42 ~~~~vv~lhg~~g~---~~~~~~~~a~~la~~G~~vi~~D~~ 80 (175)
..-.||++|.|... ..+..+.+++.|.+.|..++.=.++
T Consensus 184 ~D~vIv~~HwG~e~~~~p~~~q~~~a~~lidaGaDiIiG~Hp 225 (250)
T PF09587_consen 184 ADVVIVSLHWGIEYENYPTPEQRELARALIDAGADIIIGHHP 225 (250)
T ss_pred CCEEEEEeccCCCCCCCCCHHHHHHHHHHHHcCCCEEEeCCC
Confidence 34566777743221 1245688999999999888886654
No 464
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=24.46 E-value=1.4e+02 Score=21.09 Aligned_cols=16 Identities=13% Similarity=0.088 Sum_probs=12.4
Q ss_pred HHHHHHhCCCEEEecc
Q 030535 63 LADKVAGAGFLVVAPD 78 (175)
Q Consensus 63 ~a~~la~~G~~vi~~D 78 (175)
....|.+.|++|++.=
T Consensus 100 ~~~~L~~~GwrvlvVW 115 (150)
T COG3727 100 DIKRLQQLGWRVLVVW 115 (150)
T ss_pred HHHHHHHcCCeEEEEE
Confidence 4567888899998854
No 465
>PRK09135 pteridine reductase; Provisional
Probab=24.45 E-value=1.5e+02 Score=21.98 Aligned_cols=31 Identities=19% Similarity=0.182 Sum_probs=22.4
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
.+++.|+.+. --..++++|+++|+.|+..+.
T Consensus 8 ~vlItGa~g~---iG~~l~~~l~~~g~~v~~~~r 38 (249)
T PRK09135 8 VALITGGARR---IGAAIARTLHAAGYRVAIHYH 38 (249)
T ss_pred EEEEeCCCch---HHHHHHHHHHHCCCEEEEEcC
Confidence 4555655543 235789999999999998874
No 466
>cd01482 vWA_collagen_alphaI-XII-like Collagen: The extracellular matrix represents a complex alloy of variable members of diverse protein families defining structural integrity and various physiological functions. The most abundant family is the collagens with more than 20 different collagen types identified thus far. Collagens are centrally involved in the formation of fibrillar and microfibrillar networks of the extracellular matrix, basement membranes as well as other structures of the extracellular matrix. Some collagens have about 15-18 vWA domains in them. The VWA domains present in these collagens mediate protein-protein interactions.
Probab=24.39 E-value=2.5e+02 Score=19.60 Aligned_cols=36 Identities=19% Similarity=0.104 Sum_probs=26.6
Q ss_pred CCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 42 SKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 42 ~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
..+.||++..|... ......++.+.+.|+.++++-.
T Consensus 103 ~~k~iillTDG~~~--~~~~~~a~~lk~~gi~i~~ig~ 138 (164)
T cd01482 103 VPKVVILITDGKSQ--DDVELPARVLRNLGVNVFAVGV 138 (164)
T ss_pred CCEEEEEEcCCCCC--chHHHHHHHHHHCCCEEEEEec
Confidence 45678888877654 3456788999999998888764
No 467
>PF03848 TehB: Tellurite resistance protein TehB; InterPro: IPR015985 Tellurite resistance protein TehB is part of a tellurite-reducing operon tehA and tehB. When present in high copy number, TehB is responsible for potassium tellurite resistance, probably by increasing the reduction rate of tellurite to metallic tellurium within the bacterium. TehB is a cytoplasmic protein which possesses three conserved motifs (I, II, and III) found in S-adenosyl-L-methionine (SAM)-dependent non-nucleic acid methyltransferases []. Conformational changes in TehB are observed upon binding of both tellurite and SAM, suggesting that TehB utilises a methyltransferase activity in the detoxification of tellurite. This entry represents the methyltransferase domain found in all TehB proteins.; PDB: 2KW5_A 3MER_B 3M70_A 2I6G_A 4DQ0_D 2XVA_B 2XVM_A.
Probab=24.37 E-value=62 Score=24.16 Aligned_cols=16 Identities=44% Similarity=0.418 Sum_probs=13.2
Q ss_pred HHHHHhCCCEEEeccC
Q 030535 64 ADKVAGAGFLVVAPDF 79 (175)
Q Consensus 64 a~~la~~G~~vi~~D~ 79 (175)
+-+||++||.|.+.|.
T Consensus 45 alyLA~~G~~VtAvD~ 60 (192)
T PF03848_consen 45 ALYLASQGFDVTAVDI 60 (192)
T ss_dssp HHHHHHTT-EEEEEES
T ss_pred HHHHHHCCCeEEEEEC
Confidence 5679999999999995
No 468
>PRK07069 short chain dehydrogenase; Validated
Probab=24.28 E-value=1.3e+02 Score=22.34 Aligned_cols=30 Identities=30% Similarity=0.344 Sum_probs=20.3
Q ss_pred EEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 47 LLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 47 v~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
+++.|+.+. .-..+++.|+++|+.|+..+.
T Consensus 2 ilVtG~~~~---iG~~~a~~l~~~G~~v~~~~r 31 (251)
T PRK07069 2 AFITGAAGG---LGRAIARRMAEQGAKVFLTDI 31 (251)
T ss_pred EEEECCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 345555442 235688889889998888773
No 469
>PLN03049 pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional
Probab=24.27 E-value=1.1e+02 Score=26.15 Aligned_cols=34 Identities=12% Similarity=-0.114 Sum_probs=25.6
Q ss_pred EEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 45 AILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 45 ~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
.|+++. |.|++...-.-.|++|.++||.|.++-.
T Consensus 61 ~VlVlc-G~GNNGGDGlv~AR~L~~~G~~V~v~~~ 94 (462)
T PLN03049 61 RVLALC-GPGNNGGDGLVAARHLHHFGYKPSICYP 94 (462)
T ss_pred EEEEEE-CCCCCHHHHHHHHHHHHHCCCceEEEEE
Confidence 366776 6676666666789999999998877653
No 470
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=24.24 E-value=1.2e+02 Score=26.20 Aligned_cols=26 Identities=15% Similarity=0.152 Sum_probs=20.7
Q ss_pred CCCCcchHHHHHHHHHhCCCEEEecc
Q 030535 53 FGYEAPLFRKLADKVAGAGFLVVAPD 78 (175)
Q Consensus 53 ~g~~~~~~~~~a~~la~~G~~vi~~D 78 (175)
..++...+..+++.|+++|+.|..+-
T Consensus 31 ~~SH~~~~~~l~~~La~rGH~VTvi~ 56 (507)
T PHA03392 31 AYSHHSVFKVYVEALAERGHNVTVIK 56 (507)
T ss_pred CCcHHHHHHHHHHHHHHcCCeEEEEe
Confidence 34556778999999999999877764
No 471
>cd01475 vWA_Matrilin VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity. Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands.
Probab=24.20 E-value=2.4e+02 Score=21.03 Aligned_cols=35 Identities=14% Similarity=0.115 Sum_probs=26.0
Q ss_pred CeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 43 KSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 43 ~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
.+.||++.+|.... .....++.+.+.|+.++++-.
T Consensus 109 ~kvvillTDG~s~~--~~~~~a~~lk~~gv~i~~Vgv 143 (224)
T cd01475 109 PRVGIVVTDGRPQD--DVSEVAAKARALGIEMFAVGV 143 (224)
T ss_pred CeEEEEEcCCCCcc--cHHHHHHHHHHCCcEEEEEeC
Confidence 46678888776543 456778889889999888764
No 472
>cd03145 GAT1_cyanophycinase Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. This group contains proteins similar to the extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Cyanophycinase is believed to be a serine-type exopeptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow.
Probab=24.17 E-value=3.1e+02 Score=20.55 Aligned_cols=38 Identities=16% Similarity=0.050 Sum_probs=23.4
Q ss_pred CCeEEEEecCCCCCCcchHHHHHHHHHhCCCE-EEeccC
Q 030535 42 SKSAILLISDVFGYEAPLFRKLADKVAGAGFL-VVAPDF 79 (175)
Q Consensus 42 ~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~-vi~~D~ 79 (175)
..+.|+++.-..+........+.+.|.+.|+. +..++.
T Consensus 28 ~~~~i~~iptA~~~~~~~~~~~~~~~~~lG~~~v~~~~~ 66 (217)
T cd03145 28 AGARIVVIPAASEEPAEVGEEYRDVFERLGAREVEVLVI 66 (217)
T ss_pred CCCcEEEEeCCCcChhHHHHHHHHHHHHcCCceeEEecc
Confidence 34557777644443334566788888888874 555554
No 473
>PRK07890 short chain dehydrogenase; Provisional
Probab=24.10 E-value=1.5e+02 Score=22.19 Aligned_cols=31 Identities=35% Similarity=0.229 Sum_probs=21.7
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
.+++-|+.+. --..++++|+++|+.|+..+.
T Consensus 7 ~vlItGa~~~---IG~~la~~l~~~G~~V~~~~r 37 (258)
T PRK07890 7 VVVVSGVGPG---LGRTLAVRAARAGADVVLAAR 37 (258)
T ss_pred EEEEECCCCc---HHHHHHHHHHHcCCEEEEEeC
Confidence 3455555442 236789999999999998873
No 474
>COG0022 AcoB Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion]
Probab=24.09 E-value=4e+02 Score=21.73 Aligned_cols=59 Identities=20% Similarity=0.210 Sum_probs=41.3
Q ss_pred chHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcCCCeEEEE-----EEe
Q 030535 58 PLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVSAIGAA-----GFC 132 (175)
Q Consensus 58 ~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~v~-----G~S 132 (175)
......|+.|.++|+.+=.+|++.=.|. |.+.+++-+++. +|+.++ ..|
T Consensus 213 ~~al~AAe~l~~~Gis~EVIDLRTl~Pl------------------------D~etIi~SvkKT--gR~viV~Ea~~~~g 266 (324)
T COG0022 213 HTALEAAEELEKEGISAEVIDLRTLSPL------------------------DKETIIASVKKT--GRLVIVHEAPKTGG 266 (324)
T ss_pred HHHHHHHHHHhhcCCCeEEEeccccCcc------------------------CHHHHHHHHHhh--CcEEEEEeccccCC
Confidence 3445678889889999999998744443 567777777764 366665 456
Q ss_pred ccHHHHHHhc
Q 030535 133 WGGVVAAKLA 142 (175)
Q Consensus 133 ~GG~ia~~~a 142 (175)
+|+-++...+
T Consensus 267 ~gaei~A~i~ 276 (324)
T COG0022 267 IGAEIAALIA 276 (324)
T ss_pred hHHHHHHHHH
Confidence 6777777655
No 475
>PRK07831 short chain dehydrogenase; Provisional
Probab=24.06 E-value=1.3e+02 Score=22.69 Aligned_cols=31 Identities=23% Similarity=0.289 Sum_probs=21.2
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEecc
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPD 78 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D 78 (175)
.+++.|+.|.. --..+++.|+++|+.|+..|
T Consensus 19 ~vlItG~sg~g--IG~~ia~~l~~~G~~V~~~~ 49 (262)
T PRK07831 19 VVLVTAAAGTG--IGSATARRALEEGARVVISD 49 (262)
T ss_pred EEEEECCCccc--HHHHHHHHHHHcCCEEEEEe
Confidence 44555554322 23578999999999998876
No 476
>PRK06841 short chain dehydrogenase; Provisional
Probab=24.03 E-value=1.5e+02 Score=22.17 Aligned_cols=30 Identities=17% Similarity=0.138 Sum_probs=21.4
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEecc
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPD 78 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D 78 (175)
.+++.|+.+. --..+++.|+++|+.|+..+
T Consensus 17 ~vlItGas~~---IG~~la~~l~~~G~~Vi~~~ 46 (255)
T PRK06841 17 VAVVTGGASG---IGHAIAELFAAKGARVALLD 46 (255)
T ss_pred EEEEECCCCh---HHHHHHHHHHHCCCEEEEEe
Confidence 4555555543 23578999999999998776
No 477
>TIGR02802 Pal_lipo peptidoglycan-associated lipoprotein. Members of this protein are Pal (also called OprL), the Peptidoglycan-Associated Lipoprotein of the Tol-Pal system. The system appears to be involved both in the maintenance of outer membrane integrity and in the import of certain organic molecules as nutrients. Members of this family contain a hydrodrophobic lipoprotein signal sequence, a conserved N-terminal cleavage and modification site, a poorly conserved low-complexity region, together comprising about 65 amino acids, and a well-conserved C-terminal domain. The seed alignment for this model includes only the conserved C-terminal domain.
Probab=24.01 E-value=1.4e+02 Score=19.23 Aligned_cols=25 Identities=16% Similarity=0.003 Sum_probs=19.8
Q ss_pred hHHHHHHHHHHhcCCCeEEEEEEec
Q 030535 109 VDAKSVIAALKSKGVSAIGAAGFCW 133 (175)
Q Consensus 109 ~d~~~~~~~l~~~~~~~i~v~G~S~ 133 (175)
..+..++++|++....+|-|.||+=
T Consensus 17 ~~L~~~a~~l~~~~~~~i~I~Ghtd 41 (104)
T TIGR02802 17 AILDAHAAYLKKNPSVRVTIEGHTD 41 (104)
T ss_pred HHHHHHHHHHHHCCCcEEEEEEecC
Confidence 5577888888876555899999984
No 478
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=23.98 E-value=1.1e+02 Score=22.51 Aligned_cols=29 Identities=24% Similarity=0.145 Sum_probs=19.9
Q ss_pred EecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 48 LISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 48 ~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
++.|+.+. .-..++++|.++|+.|+..+-
T Consensus 2 lItG~~g~---iG~~la~~l~~~G~~v~~~~r 30 (239)
T TIGR01830 2 LVTGASRG---IGRAIALKLAKEGAKVIITYR 30 (239)
T ss_pred EEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 34544442 346788899999999888763
No 479
>PRK06953 short chain dehydrogenase; Provisional
Probab=23.96 E-value=1.3e+02 Score=22.16 Aligned_cols=31 Identities=19% Similarity=0.210 Sum_probs=21.5
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
.+++.|+.+. --..+++.|+++|+.|+..+.
T Consensus 3 ~vlvtG~sg~---iG~~la~~L~~~G~~v~~~~r 33 (222)
T PRK06953 3 TVLIVGASRG---IGREFVRQYRADGWRVIATAR 33 (222)
T ss_pred eEEEEcCCCc---hhHHHHHHHHhCCCEEEEEEC
Confidence 3556655543 235788889999999888873
No 480
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=23.94 E-value=2.2e+02 Score=18.73 Aligned_cols=36 Identities=17% Similarity=-0.008 Sum_probs=25.9
Q ss_pred CCeEEEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 42 SKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 42 ~~~~vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
++-.+|++. ..|.+ ......++.+.++|..++++--
T Consensus 46 ~~d~~I~iS-~sG~t-~e~~~~~~~a~~~g~~vi~iT~ 81 (126)
T cd05008 46 EDTLVIAIS-QSGET-ADTLAALRLAKEKGAKTVAITN 81 (126)
T ss_pred CCcEEEEEe-CCcCC-HHHHHHHHHHHHcCCeEEEEEC
Confidence 334566665 45655 5678899999999999988763
No 481
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=23.80 E-value=1.7e+02 Score=22.37 Aligned_cols=32 Identities=13% Similarity=0.143 Sum_probs=21.4
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEecc
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPD 78 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D 78 (175)
++++-|+.+.. .--..+++.|+++|++|+..+
T Consensus 8 ~vlItGas~~~-GIG~a~a~~l~~~G~~v~~~~ 39 (260)
T PRK06997 8 RILITGLLSNR-SIAYGIAKACKREGAELAFTY 39 (260)
T ss_pred EEEEeCCCCCC-cHHHHHHHHHHHCCCeEEEEc
Confidence 45566553222 334678999999999988754
No 482
>cd01424 MGS_CPS_II Methylglyoxal synthase-like domain from type II glutamine-dependent carbamoyl phosphate synthetase (CSP). CSP, a CarA and CarB heterodimer, catalyzes the production of carbamoyl phosphate which is subsequently employed in the metabolic pathways responsible for the synthesis of pyrimidine nucleotides or arginine. The MGS-like domain is the C-terminal domain of CarB and appears to play a regulatory role in CPS function by binding allosteric effector molecules, including UMP and ornithine.
Probab=23.77 E-value=1.3e+02 Score=19.75 Aligned_cols=22 Identities=32% Similarity=0.513 Sum_probs=18.4
Q ss_pred cchHHHHHHHHHhCCCEEEecc
Q 030535 57 APLFRKLADKVAGAGFLVVAPD 78 (175)
Q Consensus 57 ~~~~~~~a~~la~~G~~vi~~D 78 (175)
.+.+..+++.|.+.||.+++-.
T Consensus 12 k~~~~~~~~~l~~~G~~l~aT~ 33 (110)
T cd01424 12 KPEAVEIAKRLAELGFKLVATE 33 (110)
T ss_pred HhHHHHHHHHHHHCCCEEEEch
Confidence 3567899999999999998854
No 483
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=23.76 E-value=57 Score=26.20 Aligned_cols=17 Identities=35% Similarity=0.395 Sum_probs=15.2
Q ss_pred EEEEEeccHHHHHHhcc
Q 030535 127 GAAGFCWGGVVAAKLAS 143 (175)
Q Consensus 127 ~v~G~S~GG~ia~~~a~ 143 (175)
.+.|.|.||.+++.++.
T Consensus 35 ~i~GTStGgiIA~~la~ 51 (312)
T cd07212 35 WIAGTSTGGILALALLH 51 (312)
T ss_pred EEEeeChHHHHHHHHHc
Confidence 68999999999999874
No 484
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=23.73 E-value=89 Score=24.30 Aligned_cols=32 Identities=19% Similarity=0.108 Sum_probs=22.9
Q ss_pred HHHHHHHHhcCCC----eEEEEEEeccHHHHHHhcc
Q 030535 112 KSVIAALKSKGVS----AIGAAGFCWGGVVAAKLAS 143 (175)
Q Consensus 112 ~~~~~~l~~~~~~----~i~v~G~S~GG~ia~~~a~ 143 (175)
..+++.|.++++. --.+.|-|.|+..+..++.
T Consensus 16 ~GVl~aL~e~~~~l~~~~~~i~GtSAGAl~aa~~as 51 (252)
T cd07221 16 VGVTRCLSERAPHLLRDARMFFGASAGALHCVTFLS 51 (252)
T ss_pred HHHHHHHHHhCcchhccCCEEEEEcHHHHHHHHHHh
Confidence 3466666665432 2369999999999998774
No 485
>COG0431 Predicted flavoprotein [General function prediction only]
Probab=23.71 E-value=2.5e+02 Score=20.43 Aligned_cols=32 Identities=22% Similarity=0.203 Sum_probs=22.9
Q ss_pred HHHHHHHHHhc--CCCeEEEEEEeccHHHHHHhc
Q 030535 111 AKSVIAALKSK--GVSAIGAAGFCWGGVVAAKLA 142 (175)
Q Consensus 111 ~~~~~~~l~~~--~~~~i~v~G~S~GG~ia~~~a 142 (175)
+...+||+... +.+++.+++.|.|+.-.++..
T Consensus 86 lKnaiD~l~~~~~~~Kpv~~~~~s~g~~~~~~a~ 119 (184)
T COG0431 86 LKNAIDWLSREALGGKPVLLLGTSGGGAGGLRAQ 119 (184)
T ss_pred HHHHHHhCCHhHhCCCcEEEEecCCCchhHHHHH
Confidence 56677777554 346789999998887777644
No 486
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=23.65 E-value=1.4e+02 Score=22.26 Aligned_cols=31 Identities=23% Similarity=0.106 Sum_probs=21.8
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
.+++-|+.+. .-..+++.|+++|+.|+..|-
T Consensus 14 ~vlItG~~g~---iG~~la~~l~~~G~~Vi~~~r 44 (247)
T PRK08945 14 IILVTGAGDG---IGREAALTYARHGATVILLGR 44 (247)
T ss_pred EEEEeCCCch---HHHHHHHHHHHCCCcEEEEeC
Confidence 4555555542 235788999999999988873
No 487
>PRK07074 short chain dehydrogenase; Provisional
Probab=23.63 E-value=1.5e+02 Score=22.22 Aligned_cols=31 Identities=29% Similarity=0.297 Sum_probs=22.6
Q ss_pred EEEecCCCCCCcchHHHHHHHHHhCCCEEEeccC
Q 030535 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 46 vv~lhg~~g~~~~~~~~~a~~la~~G~~vi~~D~ 79 (175)
.+++.|+.+. --..+++.|+++|+.|+..+.
T Consensus 4 ~ilItGat~~---iG~~la~~L~~~g~~v~~~~r 34 (257)
T PRK07074 4 TALVTGAAGG---IGQALARRFLAAGDRVLALDI 34 (257)
T ss_pred EEEEECCcch---HHHHHHHHHHHCCCEEEEEeC
Confidence 4566666553 236789999999999999884
No 488
>cd08186 Fe-ADH8 Iron-containing alcohol dehydrogenase. Type III Iron-containing alcohol dehydrogenases (ADH). Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. The ADH of hyperthermophilic archaeon Thermococcus hydrothermalis oxidizes a series of primary aliphatic and aromatic alcohols preferentially from C2 to C8 but is also active towards methanol and glycerol and stereospecific for monoterpenes. It was suggested that the type III ADHs in microorganisms are involved in acetaldehyde detoxication rather than in alcohol turnover.
Probab=23.63 E-value=4.2e+02 Score=21.81 Aligned_cols=62 Identities=16% Similarity=0.151 Sum_probs=37.7
Q ss_pred EEEecCCCCCC-cchHHHHHHHHHhCCCEEEeccCCCCCCCCCCCCchhhHHHHHHhcCCCcchhHHHHHHHHHHhcCCC
Q 030535 46 ILLISDVFGYE-APLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVS 124 (175)
Q Consensus 46 vv~lhg~~g~~-~~~~~~~a~~la~~G~~vi~~D~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~ 124 (175)
++++.+..... ...+..+.+.|.+.|+.+..+|- ..+. +. .+++..+++.+++.+.+
T Consensus 29 ~livtd~~~~~~~g~~~~v~~~L~~~gi~~~~f~~--v~~~--p~------------------~~~v~~~~~~~~~~~~D 86 (383)
T cd08186 29 VLLVTGKSAYKKSGAWDKVEPALDEHGIEYVLYNK--VTPN--PT------------------VDQVDEAAKLGREFGAQ 86 (383)
T ss_pred EEEEcCccHHhhcChHHHHHHHHHHcCCeEEEeCC--CCCC--CC------------------HHHHHHHHHHHHHcCCC
Confidence 55566443221 24467788889888988877761 1211 11 16678888888887777
Q ss_pred eEEEE
Q 030535 125 AIGAA 129 (175)
Q Consensus 125 ~i~v~ 129 (175)
-|..+
T Consensus 87 ~IIai 91 (383)
T cd08186 87 AVIAI 91 (383)
T ss_pred EEEEe
Confidence 44433
No 489
>TIGR03371 cellulose_yhjQ cellulose synthase operon protein YhjQ. Members of this family are the YhjQ protein, found immediately upsteam of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae. In several species it is seen clearly as part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm (PubMed:16930487), based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=23.61 E-value=1.2e+02 Score=22.69 Aligned_cols=22 Identities=32% Similarity=0.182 Sum_probs=18.9
Q ss_pred hHHHHHHHHHhCCCEEEeccCC
Q 030535 59 LFRKLADKVAGAGFLVVAPDFF 80 (175)
Q Consensus 59 ~~~~~a~~la~~G~~vi~~D~~ 80 (175)
.-..+|..|+++|+.|+..|+-
T Consensus 18 ~a~nla~~la~~g~~VlliD~D 39 (246)
T TIGR03371 18 LTANLASALKLLGEPVLAIDLD 39 (246)
T ss_pred HHHHHHHHHHhCCCcEEEEeCC
Confidence 4567899999999999999975
No 490
>PRK13705 plasmid-partitioning protein SopA; Provisional
Probab=23.54 E-value=1.1e+02 Score=25.37 Aligned_cols=21 Identities=24% Similarity=0.175 Sum_probs=18.2
Q ss_pred hHHHHHHHHHhCCCEEEeccC
Q 030535 59 LFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 59 ~~~~~a~~la~~G~~vi~~D~ 79 (175)
.-..+|..|+.+|+.|+.+|+
T Consensus 123 ~a~nLA~~LA~~G~rVLlID~ 143 (388)
T PRK13705 123 VSVHLAQDLALKGLRVLLVEG 143 (388)
T ss_pred HHHHHHHHHHhcCCCeEEEcC
Confidence 356789999999999999995
No 491
>PF01870 Hjc: Archaeal holliday junction resolvase (hjc); InterPro: IPR002732 This entry represents Holliday junction resolvases (hjc gene) and related proteins, primarily from archaeal species []. The Holliday junction is an essential intermediate of homologous recombination. Holliday junctions are four-stranded DNA complexes that are formed during recombination and related DNA repair events. In the presence of divalent cations, these junctions exist predominantly as the stacked-X form in which the double-helical segments are coaxially stacked and twisted by 60 degrees in a right-handed direction across the junction cross-over. In this structure, the stacked arms resemble two adjacent double-helices, but are linked at the junction by two common strands that cross-over between the duplexes []. During homologous recombination, genetic information is physically exchanged between parental DNAs via crossing single strands of the same polarity within the four-way Holliday structure. This process is terminated by the endonucleolytic activity of resolvases, which convert the four-way DNA back to two double strands.; PDB: 2WJ0_A 2WIZ_B 2WIW_B 2WCW_C 2WCZ_A 1HH1_A 1GEF_D 1IPI_B 2EO0_B 1OB9_A ....
Probab=23.42 E-value=97 Score=19.99 Aligned_cols=20 Identities=30% Similarity=0.265 Sum_probs=15.9
Q ss_pred HHHHHHHHhCCCEEEeccCC
Q 030535 61 RKLADKVAGAGFLVVAPDFF 80 (175)
Q Consensus 61 ~~~a~~la~~G~~vi~~D~~ 80 (175)
+.+.+.|.++||.|++..-.
T Consensus 4 rel~~~L~~~Gf~v~R~~~S 23 (88)
T PF01870_consen 4 RELVKILWERGFAVVRAAGS 23 (88)
T ss_dssp HHHHHHHHHTT-EEEEBSCC
T ss_pred HHHHHHHHhCCcEEEEecCC
Confidence 67899999999999987643
No 492
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=23.30 E-value=1.7e+02 Score=23.05 Aligned_cols=36 Identities=19% Similarity=0.339 Sum_probs=24.5
Q ss_pred CCeEEEEecCCCC----CCcchHHHHHHHHHhCCCEEEec
Q 030535 42 SKSAILLISDVFG----YEAPLFRKLADKVAGAGFLVVAP 77 (175)
Q Consensus 42 ~~~~vv~lhg~~g----~~~~~~~~~a~~la~~G~~vi~~ 77 (175)
+++.|++.||+.. +..+.|..+++.|.++|+.++..
T Consensus 178 ~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~ 217 (319)
T TIGR02193 178 PAPYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLP 217 (319)
T ss_pred CCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEe
Confidence 3466777776532 33346888999998888887653
No 493
>PRK14569 D-alanyl-alanine synthetase A; Provisional
Probab=23.26 E-value=1.9e+02 Score=22.74 Aligned_cols=35 Identities=17% Similarity=0.135 Sum_probs=25.4
Q ss_pred EEEEecCCCCCCc----chHHHHHHHHHhCCCEEEeccC
Q 030535 45 AILLISDVFGYEA----PLFRKLADKVAGAGFLVVAPDF 79 (175)
Q Consensus 45 ~vv~lhg~~g~~~----~~~~~~a~~la~~G~~vi~~D~ 79 (175)
-|.+++||.+.+. .....+++.|.+.||.|+.+|.
T Consensus 5 ~i~vl~gg~s~e~~vsl~s~~~v~~aL~~~g~~~~~~~~ 43 (296)
T PRK14569 5 KIVVLYGGDSPEREVSLKSGKAVLDSLISQGYDAVGVDA 43 (296)
T ss_pred EEEEEeCCCCCchHhHHHHHHHHHHHHHHcCCEEEEEcC
Confidence 4677777765432 2456788999999999888874
No 494
>PRK10558 alpha-dehydro-beta-deoxy-D-glucarate aldolase; Provisional
Probab=23.25 E-value=2.1e+02 Score=22.25 Aligned_cols=22 Identities=18% Similarity=-0.023 Sum_probs=19.3
Q ss_pred HHHHHHHhCCCEEEeccCCCCC
Q 030535 62 KLADKVAGAGFLVVAPDFFYGD 83 (175)
Q Consensus 62 ~~a~~la~~G~~vi~~D~~~g~ 83 (175)
..++.++..||..+.+|+.||.
T Consensus 31 ~~~e~~a~~G~D~v~iD~EHg~ 52 (256)
T PRK10558 31 ITTEVLGLAGFDWLVLDGEHAP 52 (256)
T ss_pred HHHHHHHhcCCCEEEEccccCC
Confidence 5788899999999999988774
No 495
>cd02040 NifH NifH gene encodes component II (iron protein) of nitrogenase. Nitrogenase is responsible for the biological nitrogen fixation, i.e. reduction of molecular nitrogen to ammonia. NifH consists of two oxygen-sensitive metallosulfur proteins: the mollybdenum-iron (alternatively, vanadium-iron or iron-iron) protein (commonly referred to as component 1), and the iron protein (commonly referred to as component 2). The iron protein is a homodimer, with an Fe4S4 cluster bound between the subunits and two ATP-binding domains. It supplies energy by ATP hydrolysis, and transfers electrons from reduced ferredoxin or flavodoxin to component 1 for the reduction of molecular nitrogen to ammonia.
Probab=23.24 E-value=1.3e+02 Score=22.94 Aligned_cols=25 Identities=16% Similarity=0.040 Sum_probs=20.6
Q ss_pred chHHHHHHHHHhCCCEEEeccCC-CC
Q 030535 58 PLFRKLADKVAGAGFLVVAPDFF-YG 82 (175)
Q Consensus 58 ~~~~~~a~~la~~G~~vi~~D~~-~g 82 (175)
..-..+|..|+++|+.|+..|+- .+
T Consensus 16 T~~~nLA~~La~~G~kVlliD~Dpq~ 41 (270)
T cd02040 16 TTTQNLSAALAEMGKKVMIVGCDPKA 41 (270)
T ss_pred HHHHHHHHHHHhCCCeEEEEEcCCCC
Confidence 34567899999999999999985 44
No 496
>COG1341 Predicted GTPase or GTP-binding protein [General function prediction only]
Probab=23.22 E-value=1.6e+02 Score=24.74 Aligned_cols=44 Identities=20% Similarity=0.207 Sum_probs=32.1
Q ss_pred CCeEEEEecCCCCC-CcchHHHHHHHHHhCCCEEEeccCCCCCCC
Q 030535 42 SKSAILLISDVFGY-EAPLFRKLADKVAGAGFLVVAPDFFYGDPI 85 (175)
Q Consensus 42 ~~~~vv~lhg~~g~-~~~~~~~~a~~la~~G~~vi~~D~~~g~~~ 85 (175)
..++++++-|.-.. .......++..+-++||.|..+|.--|++.
T Consensus 71 ~~~~~vmvvG~vDSGKSTLt~~LaN~~l~rG~~v~iiDaDvGQ~e 115 (398)
T COG1341 71 GKVGVVMVVGPVDSGKSTLTTYLANKLLARGRKVAIIDADVGQSE 115 (398)
T ss_pred cCCcEEEEECCcCcCHHHHHHHHHHHHhhcCceEEEEeCCCCCcc
Confidence 45677887766543 334567789999999999999997666544
No 497
>PRK13869 plasmid-partitioning protein RepA; Provisional
Probab=23.21 E-value=1.5e+02 Score=24.71 Aligned_cols=23 Identities=30% Similarity=0.267 Sum_probs=19.4
Q ss_pred chHHHHHHHHHhCCCEEEeccCC
Q 030535 58 PLFRKLADKVAGAGFLVVAPDFF 80 (175)
Q Consensus 58 ~~~~~~a~~la~~G~~vi~~D~~ 80 (175)
..-..+|..|+.+|+.|+++|+-
T Consensus 137 Tta~nLA~~LA~~G~rVLlIDlD 159 (405)
T PRK13869 137 TTSAHLAQYLALQGYRVLAVDLD 159 (405)
T ss_pred HHHHHHHHHHHhcCCceEEEcCC
Confidence 34567899999999999999984
No 498
>cd02032 Bchl_like This family of proteins contains bchL and chlL. Protochlorophyllide reductase catalyzes the reductive formation of chlorophyllide from protochlorophyllide during biosynthesis of chlorophylls and bacteriochlorophylls. Three genes, bchL, bchN and bchB, are involved in light-independent protochlorophyllide reduction in bacteriochlorophyll biosynthesis. In cyanobacteria, algae, and gymnosperms, three similar genes, chlL, chlN and chlB are involved in protochlorophyllide reduction during chlorophylls biosynthesis. BchL/chlL, bchN/chlN and bchB/chlB exhibit significant sequence similarity to the nifH, nifD and nifK subunits of nitrogenase, respectively. Nitrogenase catalyzes the reductive formation of ammonia from dinitrogen.
Probab=23.21 E-value=1.3e+02 Score=23.20 Aligned_cols=22 Identities=18% Similarity=-0.010 Sum_probs=19.1
Q ss_pred hHHHHHHHHHhCCCEEEeccCC
Q 030535 59 LFRKLADKVAGAGFLVVAPDFF 80 (175)
Q Consensus 59 ~~~~~a~~la~~G~~vi~~D~~ 80 (175)
.-..+|..|+++|++|+..|+-
T Consensus 16 ~a~nLA~~la~~G~rvlliD~D 37 (267)
T cd02032 16 TSSNLSVALAKRGKKVLQIGCD 37 (267)
T ss_pred HHHHHHHHHHHCCCcEEEEecC
Confidence 3567899999999999999975
No 499
>PRK10037 cell division protein; Provisional
Probab=23.15 E-value=71 Score=24.43 Aligned_cols=22 Identities=23% Similarity=0.030 Sum_probs=19.0
Q ss_pred hHHHHHHHHHhCCCEEEeccCC
Q 030535 59 LFRKLADKVAGAGFLVVAPDFF 80 (175)
Q Consensus 59 ~~~~~a~~la~~G~~vi~~D~~ 80 (175)
.-..+|..|+++|+.|+.+|+-
T Consensus 18 ~a~nLA~~La~~G~rVLlID~D 39 (250)
T PRK10037 18 ITAALAWSLQMLGENVLVIDAC 39 (250)
T ss_pred HHHHHHHHHHhcCCcEEEEeCC
Confidence 3567899999999999999975
No 500
>PRK14059 hypothetical protein; Provisional
Probab=23.13 E-value=2.5e+02 Score=21.79 Aligned_cols=40 Identities=25% Similarity=0.410 Sum_probs=28.6
Q ss_pred hHHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhccCCCccEEE
Q 030535 109 VDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSHDIQAAV 151 (175)
Q Consensus 109 ~d~~~~~~~l~~~~~~~i~v~G~S~GG~ia~~~a~~~~v~~~v 151 (175)
.|+..+++.|++++..+|.+-| |+.++..+.....++-+.
T Consensus 165 ~dl~~~l~~L~~~g~~~vlveG---G~~l~~~fl~~~LvDel~ 204 (251)
T PRK14059 165 VDLAAAVAALAARGLRRILCEG---GPTLLGQLLAADLVDELC 204 (251)
T ss_pred CCHHHHHHHHHhCCCCEEEEec---hHHHHHHHHHcCCCeEEE
Confidence 4788899999888888888866 666666666554454444
Done!