BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030545
(175 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q20390|PPT1_CAEEL Palmitoyl-protein thioesterase 1 OS=Caenorhabditis elegans GN=ppt-1
PE=2 SV=2
Length = 298
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 85/156 (54%), Gaps = 4/156 (2%)
Query: 3 ELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLC-GSGIFCIIA 61
EL GYN +G SQG R V + C PP+KN VS+GG H G P C G I C
Sbjct: 96 ELKNGYNAIGFSQGAQFLRAVAQRCPN-PPMKNLVSVGGQHQGVFGAPYCIGDNIMCNGV 154
Query: 62 NNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFSS 121
LI Y +VQ + + Y PN + +Y ++ FL +NNE N TYK S
Sbjct: 155 RRLIDLGAYLPFVQKRVVQAQYWHDPNQVEEYKKRSIFLADINNEN--NNNPTYKRNLLS 212
Query: 122 LQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLP 157
L+NLVL+ F D +++PK+++WFG+Y DG +LP
Sbjct: 213 LKNLVLVKFNQDHMVVPKDSSWFGFYKDGDIDTILP 248
>sp|Q54CM0|PPT3_DICDI Palmitoyl-protein thioesterase 3 OS=Dictyostelium discoideum
GN=ppt3 PE=3 SV=1
Length = 289
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 86/158 (54%), Gaps = 6/158 (3%)
Query: 3 ELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCGSGIFCIIAN 62
+L+ G+N++G SQG LI R V+ P V N++S GP G P +
Sbjct: 86 KLANGFNLIGFSQGTLIARAFVQRY-NNPQVYNYISWNGPQGGQFGTPFVN----IPWVD 140
Query: 63 NLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFSSL 122
++ Y +Q L+ + Y K P+ I KYLE+ FL +NNE K N+TYKE + L
Sbjct: 141 KVLGTIPYEKTIQKKLSVAEYWKDPHRIDKYLERSIFLADINNEYQVK-NTTYKENLTKL 199
Query: 123 QNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQK 160
+VL +DK +IPKE+ WF +Y DG+ + V+P Q+
Sbjct: 200 NAMVLTYSTNDKTIIPKESGWFSFYADGSGTEVVPLQQ 237
>sp|Q8HXW6|PPT1_MACFA Palmitoyl-protein thioesterase 1 OS=Macaca fascicularis GN=PPT1
PE=2 SV=1
Length = 306
Score = 89.7 bits (221), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 78/163 (47%), Gaps = 5/163 (3%)
Query: 3 ELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLC--GSGIFCII 60
+L +GYN +G SQG R V + C PP+ N +S+GG H G +P C S C
Sbjct: 104 KLQQGYNAMGFSQGGQFLRAVAQRCPS-PPMINLISVGGQHQGVFGLPRCPGESSHICDF 162
Query: 61 ANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFS 120
+ A YS VQ+ L + Y P Y FL +N E N +YK+
Sbjct: 163 IRKTLNAGAYSKVVQERLVQAEYWHDPIKEDVYRNHSIFLADINQE--RGINESYKKNLM 220
Query: 121 SLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKMML 163
+L+ V++ F +D ++ P ++ WFG+Y G +P Q+ L
Sbjct: 221 ALKKFVMVKFLNDSIVDPVDSEWFGFYRSGQAKETIPLQETSL 263
>sp|P50897|PPT1_HUMAN Palmitoyl-protein thioesterase 1 OS=Homo sapiens GN=PPT1 PE=1 SV=1
Length = 306
Score = 89.7 bits (221), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 78/163 (47%), Gaps = 5/163 (3%)
Query: 3 ELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLC--GSGIFCII 60
+L +GYN +G SQG R V + C PP+ N +S+GG H G +P C S C
Sbjct: 104 KLQQGYNAMGFSQGGQFLRAVAQRCPS-PPMINLISVGGQHQGVFGLPRCPGESSHICDF 162
Query: 61 ANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFS 120
+ A YS VQ+ L + Y P Y FL +N E N +YK+
Sbjct: 163 IRKTLNAGAYSKVVQERLVQAEYWHDPIKEDVYRNHSIFLADINQE--RGINESYKKNLM 220
Query: 121 SLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKMML 163
+L+ V++ F +D ++ P ++ WFG+Y G +P Q+ L
Sbjct: 221 ALKKFVMVKFLNDSIVDPVDSEWFGFYRSGQAKETIPLQETSL 263
>sp|Q9W3C7|PPT1_DROME Palmitoyl-protein thioesterase 1 OS=Drosophila melanogaster GN=Ppt1
PE=1 SV=2
Length = 314
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 87/176 (49%), Gaps = 14/176 (7%)
Query: 2 KELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCGSGIF--CI 59
+ L++GY+ +G SQG R V E C PP++N ++LGG H G +P+C + C
Sbjct: 111 EHLAKGYHAIGFSQGGQFLRAVAERCPN-PPMRNLITLGGQHQGIFGLPMCPTLTEKPCD 169
Query: 60 IANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECF 119
L+ Y+ VQ L + Y P KY FL +NNEL N Y E
Sbjct: 170 YITRLLDNAAYAPEVQKALVQATYWHDPIMENKYRLGSTFLADINNEL--FINKFYIENL 227
Query: 120 SSLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKMMLEGFTSS-VWQEV 174
L+ V++ F +D ++ PKE+ WF YY G Q +++ FT S V+Q++
Sbjct: 228 QKLKKFVMVQFLNDTIVQPKESQWFQYYTTG--------QNKVIQPFTESKVYQDL 275
>sp|P45479|PPT1_RAT Palmitoyl-protein thioesterase 1 OS=Rattus norvegicus GN=Ppt1 PE=1
SV=1
Length = 306
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 76/163 (46%), Gaps = 5/163 (3%)
Query: 3 ELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLC--GSGIFCII 60
+L GYN +G SQG R V + C PP+ +S+GG H G +P C S C
Sbjct: 104 KLQHGYNAIGFSQGGQFLRAVAQRCPT-PPMMTLISVGGQHQGVFGLPRCPGESSHICDF 162
Query: 61 ANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFS 120
+ A YS VQ+ L + Y P Y FL +N E N +YKE
Sbjct: 163 IRKSLNAGAYSKVVQERLVQAQYWHDPIKEEVYRNCSIFLADINQE--RHINESYKENLM 220
Query: 121 SLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKMML 163
+L+ V++ F +D ++ P ++ WFG+Y G +P Q+ L
Sbjct: 221 ALKKFVMVKFFNDSIVDPVDSEWFGFYRSGQAKETIPLQETTL 263
>sp|P45478|PPT1_BOVIN Palmitoyl-protein thioesterase 1 OS=Bos taurus GN=PPT1 PE=1 SV=1
Length = 306
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 78/163 (47%), Gaps = 5/163 (3%)
Query: 3 ELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLC--GSGIFCII 60
+L +GYN +G SQG R V + C PP+ N +S+GG H G +P C S C
Sbjct: 104 KLQQGYNAMGFSQGGQFLRAVAQRCPS-PPMVNLISVGGQHQGVFGLPRCPGESSHICDF 162
Query: 61 ANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFS 120
+ A Y+ +Q+ L + Y P Y FL +N E N +YK+
Sbjct: 163 IRKTLNAGAYNKAIQERLVQAEYWHDPIREDIYRNHSIFLADINQE--RGVNESYKKNLM 220
Query: 121 SLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKMML 163
+L+ V++ F +D ++ P ++ WFG+Y G +P Q+ L
Sbjct: 221 ALKKFVMVKFLNDTIVDPVDSEWFGFYRSGQAKETIPLQESTL 263
>sp|O88531|PPT1_MOUSE Palmitoyl-protein thioesterase 1 OS=Mus musculus GN=Ppt1 PE=2 SV=2
Length = 306
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 77/163 (47%), Gaps = 5/163 (3%)
Query: 3 ELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLC--GSGIFCII 60
+L +GYN +G SQG R V + C PP+ +S+GG H G +P C S C
Sbjct: 104 KLQQGYNAIGFSQGGQFLRAVAQRCPT-PPMMTLISVGGQHQGVFGLPRCPGESSHICDF 162
Query: 61 ANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFS 120
+ A YS VQ+ L + Y P Y FL +N E N +YK+
Sbjct: 163 IRKSLNAGAYSKLVQERLVQAQYWHDPIKESVYRNYSIFLADINQE--RCVNESYKKNLM 220
Query: 121 SLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKMML 163
+L+ V++ F +D ++ P ++ WFG+Y G +P Q+ L
Sbjct: 221 ALKKFVMVKFFNDSIVDPVDSEWFGFYRSGQAKETIPLQESTL 263
>sp|O59747|PDF1_SCHPO Palmitoyl-protein thioesterase-dolichyl pyrophosphate phosphatase
fusion 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=pdf1 PE=1 SV=2
Length = 622
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 79/145 (54%), Gaps = 3/145 (2%)
Query: 4 LSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCG-SGIFC-IIA 61
LS G+ +GLSQG L R + + C+ +++ ++LG PH+G ++P C + + C +
Sbjct: 115 LSNGFYALGLSQGGLFLRALAQTCDAAK-IRSLITLGSPHSGINTIPGCSPTNLICKAVV 173
Query: 62 NNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFSS 121
++++ ++ ++Q+H+ + Y + KYLE KFL LNNE+ + E
Sbjct: 174 HSILGLGIWHSWIQNHVVQAQYYRTEKQYDKYLENNKFLTHLNNEVLHDNYTRNIEKLKE 233
Query: 122 LQNLVLIMFKDDKVLIPKETAWFGY 146
L NLV + F+ D ++ P + FG+
Sbjct: 234 LDNLVAVSFERDDIVEPPYSTGFGW 258
>sp|Q6GNY7|PPT2B_XENLA Lysosomal thioesterase PPT2-B OS=Xenopus laevis GN=ppt2-b PE=2 SV=1
Length = 288
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 77/142 (54%), Gaps = 2/142 (1%)
Query: 6 EGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCGSGIFCIIANNLI 65
+G +++ SQG LI RG++E V F++L P G + L ++ + +
Sbjct: 89 KGVHLICYSQGGLICRGLLETMPEHN-VDTFIALSSPLMGQYGMTLYVQKALPLVNISAL 147
Query: 66 KAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFSSLQNL 125
+ Y + ++ ++ GY + P+ KYLE FLPKLNNEL D ++ K F L+ L
Sbjct: 148 QEVCYRKFFKE-ISICGYWRDPHRYEKYLEYSAFLPKLNNELLDSNSTERKRNFLRLRKL 206
Query: 126 VLIMFKDDKVLIPKETAWFGYY 147
VLI DD+V+ P +++ FG+Y
Sbjct: 207 VLIGGPDDEVIAPWQSSHFGFY 228
>sp|Q9VKH6|PPT2_DROME Lysosomal thioesterase PPT2 homolog OS=Drosophila melanogaster
GN=Ppt2 PE=2 SV=1
Length = 288
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 71/147 (48%), Gaps = 9/147 (6%)
Query: 6 EGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCGSGIFCIIANNLI 65
EG ++G SQG L+ R ++ VK F+SL P AG G+ +I +L
Sbjct: 90 EGIIVLGYSQGGLLARAAIQSLPEHN-VKTFISLSSPQAGQ-----YGTSFLHLIFPDLA 143
Query: 66 KA---EVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFSSL 122
E++ V H + GY P YL+ +FLP +NNE ++++K L
Sbjct: 144 AKTAFELFYSRVGQHTSVGGYWNDPQRQDLYLKYSEFLPLINNEKKTSNSTSFKMGMVRL 203
Query: 123 QNLVLIMFKDDKVLIPKETAWFGYYPD 149
LV+I +D V+ P +++ FGY+ +
Sbjct: 204 NKLVMIGGPNDDVITPWQSSHFGYFDE 230
>sp|O35448|PPT2_MOUSE Lysosomal thioesterase PPT2 OS=Mus musculus GN=Ppt2 PE=2 SV=1
Length = 302
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 2/147 (1%)
Query: 1 MKELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCGSGIFCII 60
M++ EG +++ SQG L+ R ++ + V +F+SL P G +F
Sbjct: 98 MEKAPEGVHLICYSQGGLVCRALLSVMDNHN-VDSFISLSSPQMGQYGDTDYLKWLFPTS 156
Query: 61 ANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFS 120
+ + YS + Q+ + Y P+ YL FL +N E + +++ F
Sbjct: 157 MRSNLYRVCYSPWGQE-FSICNYWHDPHHDDLYLNASSFLALINGERDHPNATAWRKNFL 215
Query: 121 SLQNLVLIMFKDDKVLIPKETAWFGYY 147
+ LVLI DD V+ P ++++FG+Y
Sbjct: 216 RVGRLVLIGGPDDGVITPWQSSFFGFY 242
>sp|O70489|PPT2_RAT Lysosomal thioesterase PPT2 OS=Rattus norvegicus GN=Ppt2 PE=2 SV=1
Length = 302
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 2/147 (1%)
Query: 1 MKELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCGSGIFCII 60
M++ EG +++ SQG L+ R ++ + V +F+SL P G +F
Sbjct: 98 MEKAPEGVHLICYSQGGLVCRALLSVMDEHN-VDSFISLSSPQMGQYGDTDYLKWLFPTS 156
Query: 61 ANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFS 120
+ + YS + Q+ + Y P+ YL FL +N E + +++ F
Sbjct: 157 MRSNLYRICYSPWGQE-FSICNYWHDPHHDDLYLNASSFLALINGERDHPNATAWRKNFL 215
Query: 121 SLQNLVLIMFKDDKVLIPKETAWFGYY 147
+ LVLI DD V+ P ++++FG+Y
Sbjct: 216 RVGRLVLIGGPDDGVITPWQSSFFGFY 242
>sp|Q6PCJ9|PPT2A_XENLA Lysosomal thioesterase PPT2-A OS=Xenopus laevis GN=ppt2-a PE=2 SV=1
Length = 296
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 2/144 (1%)
Query: 6 EGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCGSGIFCIIANNLI 65
+G +++ SQG LI RG+++ V F+SL P G +F + +
Sbjct: 97 DGVHLLCYSQGGLICRGLLQTMPDHN-VDTFISLSSPQMGQYGDTDYLRYLFPTYVKSNL 155
Query: 66 KAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFSSLQNL 125
Y+ Q + + P+ Y+ FL LN+E P+ + +K+ F L+ +
Sbjct: 156 YRLCYTQMGQT-FSICNFWNDPHHHGIYVNVSDFLAPLNSERPEPNATDWKKNFLRLRKM 214
Query: 126 VLIMFKDDKVLIPKETAWFGYYPD 149
VLI DD V+ P E++ FG+Y +
Sbjct: 215 VLIGGPDDGVITPWESSHFGFYDE 238
>sp|Q1JQA0|PPT2_BOVIN Lysosomal thioesterase PPT2 OS=Bos taurus GN=PPT2 PE=2 SV=1
Length = 305
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 4/163 (2%)
Query: 1 MKELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCGSGIFCII 60
M + +G +++ SQG L+ R ++ + V +F+SL P G +F
Sbjct: 101 MAKALQGVHLICYSQGGLVCRALLSVMDEHN-VDSFISLSSPQMGQYGDTNYLKWLFPTS 159
Query: 61 ANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFS 120
+ + YS + Q+ + Y P+ YL FL +N E + +++ F
Sbjct: 160 MRSNLYRICYSPWGQE-FSICNYWHDPHHDDLYLNASSFLALINGERDHPNATAWRKNFL 218
Query: 121 SLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKMML 163
L LVLI DD V+ P ++++FG+Y A VL +K ++
Sbjct: 219 RLGRLVLIGGPDDGVITPWQSSFFGFY--DANETVLEMEKQLV 259
>sp|Q9UMR5|PPT2_HUMAN Lysosomal thioesterase PPT2 OS=Homo sapiens GN=PPT2 PE=1 SV=4
Length = 302
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 68/147 (46%), Gaps = 2/147 (1%)
Query: 1 MKELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCGSGIFCII 60
M + +G +++ SQG L+ R ++ + V +F+SL P G +F
Sbjct: 98 MAKAPQGVHLICYSQGGLVCRALLSVMDDHN-VDSFISLSSPQMGQYGDTDYLKWLFPTS 156
Query: 61 ANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFS 120
+ + YS + Q+ + Y P+ YL FL +N E + +++ F
Sbjct: 157 MRSNLYRICYSPWGQE-FSICNYWHDPHHDDLYLNASSFLALINGERDHPNATVWRKNFL 215
Query: 121 SLQNLVLIMFKDDKVLIPKETAWFGYY 147
+ +LVLI DD V+ P ++++FG+Y
Sbjct: 216 RVGHLVLIGGPDDGVITPWQSSFFGFY 242
>sp|P35409|GLHR_ANTEL Probable glycoprotein hormone G-protein coupled receptor
OS=Anthopleura elegantissima PE=2 SV=1
Length = 925
Score = 33.9 bits (76), Expect = 0.53, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 77 HLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFSSLQNL 125
H++ SG + P+DI ++LEK K+L NN++ + K +SSL L
Sbjct: 66 HVSFSGEISIPSDILQHLEKLKYLTLNNNKIKNIAKFRVKNGYSSLITL 114
>sp|O31929|YOPI_BACSU SPBc2 prophage-derived uncharacterized protein YopI OS=Bacillus
subtilis (strain 168) GN=yopI PE=4 SV=1
Length = 177
Score = 33.5 bits (75), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 19/74 (25%)
Query: 89 DIPKYLEKCKFLPKLNNELPDKRNSTYKECFSSLQNLVLIMFKDDKVLIPKETAWFGYYP 148
+IPK L + KF CF NL++ + DDK +E A FGYY
Sbjct: 82 EIPKVLREIKF------------------CFYKNTNLIVSVTPDDKAT-TEEFAEFGYYR 122
Query: 149 DGAFSPVLPPQKMM 162
D F+ LP ++++
Sbjct: 123 DKLFNINLPSKQII 136
>sp|Q3A1R3|SYI_PELCD Isoleucine--tRNA ligase OS=Pelobacter carbinolicus (strain DSM 2380
/ Gra Bd 1) GN=ileS PE=3 SV=1
Length = 927
Score = 32.3 bits (72), Expect = 1.7, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 36 FVSLGGPHAGTASVPLCGSGIFCIIANNLIKAEVYSDYVQDHLAPSGYLKFPND 89
FV GG G + C S C+ A L +AEV +Y DH +PS Y+KFP D
Sbjct: 171 FVEKGGLFKGKKPIHWCSS---CVTA--LAEAEV--EYA-DHKSPSIYVKFPFD 216
>sp|A4W5X6|F16PA_ENT38 Fructose-1,6-bisphosphatase class 1 OS=Enterobacter sp. (strain
638) GN=fbp PE=3 SV=1
Length = 332
Score = 31.2 bits (69), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 15/110 (13%)
Query: 41 GPHAGTASVPLCGSGIFCIIANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFL 100
G HA T L G+FC+ + E S Y + Y+KFPN + KY++ C+
Sbjct: 174 GVHAFTYDPSL---GVFCLCQERMRYPEKGSTY---SINEGNYIKFPNGVKKYIKFCQ-- 225
Query: 101 PKLNNELPDKRNSTYKECFSSLQNLVLIMFKDDKVLIPKETAWFGYYPDG 150
+ P +R T + S + + + K L P + +PDG
Sbjct: 226 ---EEDTPTQRPYTSRYIGSLVADFHRNLLKGGIYLYPSTAS----HPDG 268
>sp|Q6CN95|HAT1_KLULA Histone acetyltransferase type B catalytic subunit OS=Kluyveromyces
lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC
1267 / NRRL Y-1140 / WM37) GN=HAT1 PE=3 SV=1
Length = 390
Score = 31.2 bits (69), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 12/70 (17%)
Query: 97 CKFLPKLNNELPDKRNSTYKECFSSLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVL 156
K+ KLNNE+ D +Q L+L +D V+I E AW + + L
Sbjct: 69 VKYDAKLNNEIED------------VQKLLLDKLPEDDVIIKDEEAWIKTFTKEQETFAL 116
Query: 157 PPQKMMLEGF 166
P + ++E +
Sbjct: 117 PEKDKLVEEY 126
>sp|P38825|TOM71_YEAST Protein TOM71 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=TOM71 PE=1 SV=1
Length = 639
Score = 30.8 bits (68), Expect = 5.1, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 42 PHAGTASVPLCGSGIFCIIANNLIKAEV-YSDYVQDHLAPSGYL 84
P A++ LC +GIF + NNL+ A+V + + H P+ Y+
Sbjct: 339 PLRENAALALCYTGIFHFLKNNLLDAQVLLQESINLHPTPNSYI 382
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.140 0.436
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,755,076
Number of Sequences: 539616
Number of extensions: 3308288
Number of successful extensions: 6457
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 6413
Number of HSP's gapped (non-prelim): 57
length of query: 175
length of database: 191,569,459
effective HSP length: 110
effective length of query: 65
effective length of database: 132,211,699
effective search space: 8593760435
effective search space used: 8593760435
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)