Your job contains 1 sequence.
>030551
MGEFFLHVSADDRPSLTSPGRKATIREFYGVILPSLQRLHSNLRELDDAKIENLEIGSFD
RMRGDSQVGSADLEREDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTKSESCPFCRGSM
KRVNSEDLWVLTCTDDVIDPETVSKEDLLRFYLYINSLPKDYPDALFVVYYEYLI
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 030551
(175 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2024026 - symbol:AT1G24440 species:3702 "Arabi... 660 8.5e-65 1
TAIR|locus:505006120 - symbol:AT1G13195 species:3702 "Ara... 624 5.5e-61 1
TAIR|locus:2149750 - symbol:AIRP2 "ABA Insensitive RING P... 394 1.3e-36 1
TAIR|locus:505006703 - symbol:AT5G58787 "AT5G58787" speci... 385 1.2e-35 1
UNIPROTKB|Q5ZM74 - symbol:RNF141 "RING finger protein 141... 128 3.4e-08 1
ZFIN|ZDB-GENE-040625-71 - symbol:rnf141 "ring finger prot... 126 2.0e-07 1
UNIPROTKB|E1BTQ2 - symbol:RNF8 "Uncharacterized protein" ... 116 3.8e-07 1
UNIPROTKB|Q32L15 - symbol:RNF141 "RING finger protein 141... 125 3.8e-07 1
UNIPROTKB|F1Q4F0 - symbol:RNF141 "RING finger protein 141... 125 3.8e-07 1
UNIPROTKB|Q8WVD5 - symbol:RNF141 "RING finger protein 141... 125 3.8e-07 1
MGI|MGI:1914400 - symbol:Rnf141 "ring finger protein 141"... 125 3.8e-07 1
RGD|1303154 - symbol:rnf141 "ring finger protein 141" spe... 125 3.8e-07 1
UNIPROTKB|Q6IV57 - symbol:Rnf141 "RING finger protein 141... 125 3.8e-07 1
UNIPROTKB|Q2XNS1 - symbol:RNF141 "RING finger protein 141... 125 3.8e-07 1
UNIPROTKB|I3LDC9 - symbol:RNF141 "Uncharacterized protein... 124 6.0e-07 1
UNIPROTKB|I3LUY7 - symbol:I3LUY7 "Uncharacterized protein... 113 7.8e-07 1
UNIPROTKB|Q7ZX20 - symbol:rnf8-a "E3 ubiquitin-protein li... 123 6.1e-06 1
UNIPROTKB|Q6NRG0 - symbol:rnf8-b "E3 ubiquitin-protein li... 122 8.6e-06 1
TAIR|locus:2173772 - symbol:AT5G40250 species:3702 "Arabi... 119 1.5e-05 1
TAIR|locus:2074678 - symbol:AT3G11110 species:3702 "Arabi... 109 1.7e-05 1
TAIR|locus:2140069 - symbol:AT4G40070 species:3702 "Arabi... 118 1.7e-05 1
DICTYBASE|DDB_G0292408 - symbol:DDB_G0292408 "RING finger... 114 2.1e-05 1
UNIPROTKB|Q2HJ46 - symbol:RNF8 "E3 ubiquitin-protein liga... 119 2.3e-05 1
ZFIN|ZDB-GENE-040426-849 - symbol:rnf8 "ring finger prote... 119 2.6e-05 1
TAIR|locus:2018334 - symbol:AT1G04360 species:3702 "Arabi... 117 3.1e-05 1
TAIR|locus:2173497 - symbol:AT5G37200 "AT5G37200" species... 111 6.1e-05 1
UNIPROTKB|F8WD60 - symbol:RNF168 "E3 ubiquitin-protein li... 96 6.5e-05 1
TAIR|locus:2098505 - symbol:AT3G07200 species:3702 "Arabi... 108 7.8e-05 1
UNIPROTKB|E9PN08 - symbol:RNF5 "E3 ubiquitin-protein liga... 94 0.00011 1
UNIPROTKB|E2RKD8 - symbol:RNF8 "Uncharacterized protein" ... 114 0.00012 1
UNIPROTKB|J9P6M8 - symbol:RNF8 "Uncharacterized protein" ... 114 0.00012 1
UNIPROTKB|A2AE50 - symbol:TRIM26 "Tripartite motif-contai... 93 0.00015 1
UNIPROTKB|F1RVS2 - symbol:LOC100153408 "Uncharacterized p... 113 0.00016 1
UNIPROTKB|I3L6W2 - symbol:LOC100153408 "Uncharacterized p... 113 0.00016 1
TAIR|locus:2169063 - symbol:AT5G47610 species:3702 "Arabi... 104 0.00018 1
MGI|MGI:1929069 - symbol:Rnf8 "ring finger protein 8" spe... 111 0.00031 1
FB|FBgn0035233 - symbol:Pex10 "Peroxin 10" species:7227 "... 108 0.00034 1
UNIPROTKB|F1NVB6 - symbol:F1NVB6 "Uncharacterized protein... 112 0.00035 1
TAIR|locus:2123446 - symbol:AT4G10940 "AT4G10940" species... 104 0.00037 1
DICTYBASE|DDB_G0282693 - symbol:pex10 "peroxisome biogene... 109 0.00038 1
TAIR|locus:2061698 - symbol:AT2G20030 species:3702 "Arabi... 109 0.00041 1
WB|WBGene00017342 - symbol:F10D7.5 species:6239 "Caenorha... 111 0.00043 1
TAIR|locus:2199902 - symbol:AT1G23980 species:3702 "Arabi... 108 0.00049 1
TAIR|locus:2144088 - symbol:AT5G06490 species:3702 "Arabi... 103 0.00054 1
UNIPROTKB|J3KS72 - symbol:TRIM37 "E3 ubiquitin-protein li... 88 0.00058 1
ZFIN|ZDB-GENE-020213-1 - symbol:mkrn1 "makorin, ring fing... 108 0.00065 1
TAIR|locus:2172550 - symbol:AT5G57750 species:3702 "Arabi... 103 0.00066 1
DICTYBASE|DDB_G0279263 - symbol:DDB_G0279263 "E3 ubiquiti... 110 0.00072 1
UNIPROTKB|F1NHH0 - symbol:RNF185 "E3 ubiquitin-protein li... 86 0.00099 1
UNIPROTKB|F8W6K1 - symbol:SCAF11 "Protein SCAF11" species... 86 0.00099 1
UNIPROTKB|J3QSA0 - symbol:TRIM37 "E3 ubiquitin-protein li... 86 0.00099 1
>TAIR|locus:2024026 [details] [associations]
symbol:AT1G24440 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC000103 InterPro:IPR017907 HOGENOM:HOG000241127
ProtClustDB:CLSN2685154 EMBL:AY085533 EMBL:BT000927 IPI:IPI00547120
PIR:E86378 RefSeq:NP_564218.1 UniGene:At.26915
ProteinModelPortal:Q9FYL9 SMR:Q9FYL9 EnsemblPlants:AT1G24440.1
GeneID:839060 KEGG:ath:AT1G24440 TAIR:At1g24440 eggNOG:NOG314445
InParanoid:Q9FYL9 OMA:CRGSIKR PhylomeDB:Q9FYL9 ArrayExpress:Q9FYL9
Genevestigator:Q9FYL9 Uniprot:Q9FYL9
Length = 251
Score = 660 (237.4 bits), Expect = 8.5e-65, P = 8.5e-65
Identities = 124/173 (71%), Positives = 141/173 (81%)
Query: 8 VSADDRPSLTSPGRKATIREFYGVILPSLQRLHSNLRELDDAKI-----ENLEIGSFDRM 62
V AD R + + GRKATIREFYGVILPSL+RLH N +L D + + + +D +
Sbjct: 80 VRADGRWNRSRYGRKATIREFYGVILPSLERLHINFADLPDESLWYPNPKAITKKQYD-I 138
Query: 63 RGDSQVGSADLEREDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTKSESCPFCRGSMKR 122
G + S DLEREDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTKSESCPFCRGS+KR
Sbjct: 139 EGSRYMNSIDLEREDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTKSESCPFCRGSIKR 198
Query: 123 VNSEDLWVLTCTDDVIDPETVSKEDLLRFYLYINSLPKDYPDALFVVYYEYLI 175
VNSEDLWVLTC +DV+DPETV+KEDLLRFYL+INSLPKDYP+A F+VY EYLI
Sbjct: 199 VNSEDLWVLTCDEDVVDPETVTKEDLLRFYLHINSLPKDYPEAAFLVYNEYLI 251
>TAIR|locus:505006120 [details] [associations]
symbol:AT1G13195 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0010200 "response to chitin" evidence=RCA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC007357
InterPro:IPR017907 HOGENOM:HOG000241127 ProtClustDB:CLSN2685154
UniGene:At.27310 UniGene:At.48183 EMBL:AY087531 EMBL:BT024484
EMBL:AK226915 IPI:IPI00548949 PIR:D86266 RefSeq:NP_563922.1
ProteinModelPortal:Q9SAF3 SMR:Q9SAF3 EnsemblPlants:AT1G13195.1
GeneID:837878 KEGG:ath:AT1G13195 TAIR:At1g13195 InParanoid:Q9SAF3
OMA:CLIPRYL PhylomeDB:Q9SAF3 Genevestigator:Q9SAF3 Uniprot:Q9SAF3
Length = 260
Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
Identities = 119/169 (70%), Positives = 135/169 (79%)
Query: 8 VSADDRPSLTSPGRKATIREFYGVILPSLQRLHSNLRELDDAKIE-NLEIGS--FDRMRG 64
V +D +P LT+ GRKATI EFYGVILPSLQ LHSNL EL+ I +L+ S +
Sbjct: 88 VQSDGQPKLTTHGRKATISEFYGVILPSLQLLHSNLDELETTDIGFDLKRLSKKITKEAR 147
Query: 65 DSQVGSADLEREDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTKSESCPFCRGSMKRVN 124
S+ +A LERE+ECGICLE CTKMVLPNCCH+MCIKCYRNWN KS+SCPFCRGSMKRVN
Sbjct: 148 SSRFSNAGLEREEECGICLETCTKMVLPNCCHSMCIKCYRNWNLKSQSCPFCRGSMKRVN 207
Query: 125 SEDLWVLTCTDDVIDPETVSKEDLLRFYLYINSLPKDYPDALFVVYYEY 173
SEDLWVL +DV+D T S+EDL RFYLYINSLPKDYP+ALFVVYYEY
Sbjct: 208 SEDLWVLAGDNDVVDTRTASREDLFRFYLYINSLPKDYPEALFVVYYEY 256
>TAIR|locus:2149750 [details] [associations]
symbol:AIRP2 "ABA Insensitive RING Protein 2"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0015996 "chlorophyll
catabolic process" evidence=RCA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AL161946 HOGENOM:HOG000241127 ProtClustDB:CLSN2685154
EMBL:AY050835 EMBL:AY091165 EMBL:DQ059129 IPI:IPI00537853
PIR:T48173 RefSeq:NP_195772.1 UniGene:At.22936
ProteinModelPortal:Q9M022 SMR:Q9M022 STRING:Q9M022
EnsemblPlants:AT5G01520.1 GeneID:831747 KEGG:ath:AT5G01520
TAIR:At5g01520 InParanoid:Q9M022 OMA:RNWRARS PhylomeDB:Q9M022
Genevestigator:Q9M022 Uniprot:Q9M022
Length = 242
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 74/162 (45%), Positives = 106/162 (65%)
Query: 11 DDRPSLTSPGRKATIREFYGVILPSLQRLHSNLRELDDAKIENLEIGSFDRM-RGDS-QV 68
D + +++ RK +IREFY V+ PSL +LH + ++++ K + + + + R D ++
Sbjct: 76 DGKTTMSLHERKTSIREFYDVLFPSLLQLHGGITDVEERKQKEICDKRYRKKDRTDKGKM 135
Query: 69 GSADLEREDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTKSESCPFCRGSMKRVNSEDL 128
DLERE+ECGICLE K+VLP C H+MCI CYRNW +S+SCPFCRGS+KRVNS DL
Sbjct: 136 SEIDLEREEECGICLEIRNKVVLPTCNHSMCINCYRNWRARSQSCPFCRGSLKRVNSGDL 195
Query: 129 WVLTCTDDVIDPETVSKEDLLRFYLYINSLPKDYPDALFVVY 170
W+ TC+ ++ D + KE+L R +YI+ LP D V Y
Sbjct: 196 WIYTCSAEIADLPAIYKENLKRLLIYIDKLPLVTSDPNLVPY 237
>TAIR|locus:505006703 [details] [associations]
symbol:AT5G58787 "AT5G58787" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 eggNOG:NOG273394 EMBL:AY088898 EMBL:BT005412
EMBL:AK118993 IPI:IPI00519998 RefSeq:NP_568885.1 UniGene:At.29261
ProteinModelPortal:Q8L8N5 SMR:Q8L8N5 STRING:Q8L8N5
EnsemblPlants:AT5G58787.1 GeneID:835995 KEGG:ath:AT5G58787
TAIR:At5g58787 HOGENOM:HOG000241127 InParanoid:Q8L8N5 OMA:DWRGRSQ
PhylomeDB:Q8L8N5 ProtClustDB:CLSN2685154 ArrayExpress:Q8L8N5
Genevestigator:Q8L8N5 Uniprot:Q8L8N5
Length = 242
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 68/158 (43%), Positives = 110/158 (69%)
Query: 10 ADDRPSLTSPGRKATIREFYGVILPSLQRLHSNLRELDDAKIENLEIGSFDRMRGDSQVG 69
AD + +++ RKA+IREF VILPSL +L + ++DD+K + + + R + +S++
Sbjct: 76 ADGKTTMSVYERKASIREFQAVILPSLSQLQRGVTDIDDSKQKEVCKMRY-RKKDESEMS 134
Query: 70 SADLEREDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTKSESCPFCRGSMKRVNSEDLW 129
++ERE+ECGIC+E +K+VLPNC H++CIKCYR+W +S+SCPFCR S+KRV+S DLW
Sbjct: 135 EIEIEREEECGICMEMNSKVVLPNCTHSLCIKCYRDWRGRSQSCPFCRDSLKRVDSGDLW 194
Query: 130 VLTCTDDVIDPETVSKEDLLRFYLYINSLPKDYPDALF 167
+ +D ++ +++E+ R ++YI LP PD ++
Sbjct: 195 MFLDQNDTVNLTAIARENQKRLFMYIEKLPLVVPDQVY 232
>UNIPROTKB|Q5ZM74 [details] [associations]
symbol:RNF141 "RING finger protein 141" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 CTD:50862 eggNOG:NOG273394
GeneTree:ENSGT00390000003145 HOGENOM:HOG000247058
HOVERGEN:HBG055763 OMA:MWMGRVK OrthoDB:EOG4GHZQ3 EMBL:AJ719510
IPI:IPI00597758 RefSeq:NP_001007926.1 UniGene:Gga.7687
ProteinModelPortal:Q5ZM74 SMR:Q5ZM74 Ensembl:ENSGALT00000009054
GeneID:423039 KEGG:gga:423039 InParanoid:Q5ZM74 NextBio:20825570
Uniprot:Q5ZM74
Length = 230
Score = 128 (50.1 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 76 EDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTKSESCPFCRGSMKRVNSEDLWVLT 132
EDEC IC++ ++LP C H+ C KC W+ + SCP CR + + D WV++
Sbjct: 152 EDECCICMDGRVDLILP-CAHSFCQKCIDKWSDRHRSCPVCRRQV--TGAGDSWVVS 205
>ZFIN|ZDB-GENE-040625-71 [details] [associations]
symbol:rnf141 "ring finger protein 141" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
ZFIN:ZDB-GENE-040625-71 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 CTD:50862
eggNOG:NOG273394 HOGENOM:HOG000247058 HOVERGEN:HBG055763
OrthoDB:EOG4GHZQ3 EMBL:AY621088 EMBL:BC071534 IPI:IPI00613818
RefSeq:NP_001007291.1 UniGene:Dr.77741 ProteinModelPortal:Q6IV56
SMR:Q6IV56 GeneID:414846 KEGG:dre:414846 InParanoid:Q6IV56
NextBio:20818742 Uniprot:Q6IV56
Length = 222
Score = 126 (49.4 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 26/79 (32%), Positives = 40/79 (50%)
Query: 55 EIGSFDRMRGDSQVGSA-DLEREDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTKSESC 113
E S D + +G L E+EC IC++ ++LP C H+ C KC W+ +S +C
Sbjct: 122 EGSSEDTCQASMWMGRVKQLTDEEECCICMDGKADLILP-CAHSFCQKCIDKWSGQSRNC 180
Query: 114 PFCRGSMKRVNSEDLWVLT 132
P CR + N WV++
Sbjct: 181 PVCRIQVTAANES--WVMS 197
>UNIPROTKB|E1BTQ2 [details] [associations]
symbol:RNF8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0016881 "acid-amino acid ligase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017335 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00400000022349
PANTHER:PTHR15067:SF3 OMA:VEMKEHR EMBL:AADN02011899 IPI:IPI00820679
Ensembl:ENSGALT00000035395 Uniprot:E1BTQ2
Length = 136
Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 22/67 (32%), Positives = 32/67 (47%)
Query: 73 LEREDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTKSESCPFCRGSMKRVNSEDLWVLT 132
LE E +C IC E + V NC H+ C C W + CP CR +K + L +
Sbjct: 5 LENELQCTICSEHFIEAVTLNCAHSFCSYCIDEWTKRKVECPICRQEIKS-KTRSLVLDN 63
Query: 133 CTDDVID 139
C D +++
Sbjct: 64 CIDRMVE 70
>UNIPROTKB|Q32L15 [details] [associations]
symbol:RNF141 "RING finger protein 141" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:BC109813 IPI:IPI00760467
RefSeq:NP_001035656.1 UniGene:Bt.107371 ProteinModelPortal:Q32L15
SMR:Q32L15 PRIDE:Q32L15 Ensembl:ENSBTAT00000021020 GeneID:539455
KEGG:bta:539455 CTD:50862 eggNOG:NOG273394
GeneTree:ENSGT00390000003145 HOGENOM:HOG000247058
HOVERGEN:HBG055763 InParanoid:Q32L15 OMA:MWMGRVK OrthoDB:EOG4GHZQ3
NextBio:20877998 Uniprot:Q32L15
Length = 230
Score = 125 (49.1 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 73 LEREDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTKSESCPFCRGSMKRVNSEDLWVLT 132
L E+EC IC++ ++LP C H+ C KC W+ + +CP CR M N WV++
Sbjct: 149 LTDEEECCICMDGRADLILP-CAHSFCQKCIDKWSDRHRNCPICRLQMTGANES--WVVS 205
>UNIPROTKB|F1Q4F0 [details] [associations]
symbol:RNF141 "RING finger protein 141" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0006355 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00390000003145 OMA:MWMGRVK EMBL:AAEX03012903
ProteinModelPortal:F1Q4F0 Ensembl:ENSCAFT00000039375 Uniprot:F1Q4F0
Length = 230
Score = 125 (49.1 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 73 LEREDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTKSESCPFCRGSMKRVNSEDLWVLT 132
L E+EC IC++ ++LP C H+ C KC W+ + +CP CR M N WV++
Sbjct: 149 LTDEEECCICMDGRADLILP-CAHSFCQKCIDKWSDRHRNCPICRLQMTGANES--WVVS 205
>UNIPROTKB|Q8WVD5 [details] [associations]
symbol:RNF141 "RING finger protein 141" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
EMBL:CH471064 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 CTD:50862 eggNOG:NOG273394 HOGENOM:HOG000247058
HOVERGEN:HBG055763 OMA:MWMGRVK OrthoDB:EOG4GHZQ3 EMBL:AF214680
EMBL:AK289764 EMBL:BC018104 EMBL:BT006662 IPI:IPI00152564
RefSeq:NP_057506.2 UniGene:Hs.44685 UniGene:Hs.712894 PDB:2ECN
PDBsum:2ECN ProteinModelPortal:Q8WVD5 SMR:Q8WVD5 IntAct:Q8WVD5
STRING:Q8WVD5 PhosphoSite:Q8WVD5 DMDM:74751546 PRIDE:Q8WVD5
DNASU:50862 Ensembl:ENST00000265981 GeneID:50862 KEGG:hsa:50862
UCSC:uc001mis.1 GeneCards:GC11M010533 HGNC:HGNC:21159 HPA:HPA018133
neXtProt:NX_Q8WVD5 PharmGKB:PA134981805 InParanoid:Q8WVD5
PhylomeDB:Q8WVD5 ChiTaRS:RNF141 EvolutionaryTrace:Q8WVD5
GenomeRNAi:50862 NextBio:53366 ArrayExpress:Q8WVD5 Bgee:Q8WVD5
CleanEx:HS_RNF141 CleanEx:HS_ZNF230 Genevestigator:Q8WVD5
GermOnline:ENSG00000110315 Uniprot:Q8WVD5
Length = 230
Score = 125 (49.1 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 73 LEREDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTKSESCPFCRGSMKRVNSEDLWVLT 132
L E+EC IC++ ++LP C H+ C KC W+ + +CP CR M N WV++
Sbjct: 149 LTDEEECCICMDGRADLILP-CAHSFCQKCIDKWSDRHRNCPICRLQMTGANES--WVVS 205
>MGI|MGI:1914400 [details] [associations]
symbol:Rnf141 "ring finger protein 141" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IDA] [GO:0005575
"cellular_component" evidence=ND] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 MGI:MGI:1914400 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 CTD:50862 eggNOG:NOG273394
GeneTree:ENSGT00390000003145 HOGENOM:HOG000247058
HOVERGEN:HBG055763 OMA:MWMGRVK EMBL:AF353167 EMBL:AK006791
EMBL:AK011839 EMBL:AK015505 EMBL:BC018553 IPI:IPI00874421
RefSeq:NP_080275.2 UniGene:Mm.96867 ProteinModelPortal:Q99MB7
SMR:Q99MB7 STRING:Q99MB7 PhosphoSite:Q99MB7 PaxDb:Q99MB7
PRIDE:Q99MB7 Ensembl:ENSMUST00000106682 Ensembl:ENSMUST00000177236
GeneID:67150 KEGG:mmu:67150 UCSC:uc009jfp.1 NextBio:323730
Bgee:Q99MB7 CleanEx:MM_RNF141 Genevestigator:Q99MB7
GermOnline:ENSMUSG00000030788 Uniprot:Q99MB7
Length = 230
Score = 125 (49.1 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 73 LEREDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTKSESCPFCRGSMKRVNSEDLWVLT 132
L E+EC IC++ ++LP C H+ C KC W+ + +CP CR M N WV++
Sbjct: 149 LTDEEECCICMDGRADLILP-CAHSFCQKCIDKWSDRHRNCPICRLQMTGANES--WVVS 205
>RGD|1303154 [details] [associations]
symbol:rnf141 "ring finger protein 141" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA;ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 RGD:1303154
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 CTD:50862 eggNOG:NOG273394
GeneTree:ENSGT00390000003145 HOGENOM:HOG000247058
HOVERGEN:HBG055763 OrthoDB:EOG4GHZQ3 EMBL:AY621087 IPI:IPI00192051
RefSeq:NP_001001800.1 UniGene:Rn.127990 ProteinModelPortal:Q6IV57
SMR:Q6IV57 PhosphoSite:Q6IV57 PRIDE:Q6IV57
Ensembl:ENSRNOT00000024561 GeneID:308900 KEGG:rno:308900
UCSC:RGD:1303154 NextBio:659756 ArrayExpress:Q6IV57
Genevestigator:Q6IV57 GermOnline:ENSRNOG00000017900 Uniprot:Q6IV57
Length = 230
Score = 125 (49.1 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 73 LEREDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTKSESCPFCRGSMKRVNSEDLWVLT 132
L E+EC IC++ ++LP C H+ C KC W+ + +CP CR M N WV++
Sbjct: 149 LTDEEECCICMDGRADLILP-CAHSFCQKCIDKWSDRHRNCPICRLQMTGANES--WVVS 205
>UNIPROTKB|Q6IV57 [details] [associations]
symbol:Rnf141 "RING finger protein 141" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:1303154 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 CTD:50862
eggNOG:NOG273394 GeneTree:ENSGT00390000003145 HOGENOM:HOG000247058
HOVERGEN:HBG055763 OrthoDB:EOG4GHZQ3 EMBL:AY621087 IPI:IPI00192051
RefSeq:NP_001001800.1 UniGene:Rn.127990 ProteinModelPortal:Q6IV57
SMR:Q6IV57 PhosphoSite:Q6IV57 PRIDE:Q6IV57
Ensembl:ENSRNOT00000024561 GeneID:308900 KEGG:rno:308900
UCSC:RGD:1303154 NextBio:659756 ArrayExpress:Q6IV57
Genevestigator:Q6IV57 GermOnline:ENSRNOG00000017900 Uniprot:Q6IV57
Length = 230
Score = 125 (49.1 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 73 LEREDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTKSESCPFCRGSMKRVNSEDLWVLT 132
L E+EC IC++ ++LP C H+ C KC W+ + +CP CR M N WV++
Sbjct: 149 LTDEEECCICMDGRADLILP-CAHSFCQKCIDKWSDRHRNCPICRLQMTGANES--WVVS 205
>UNIPROTKB|Q2XNS1 [details] [associations]
symbol:RNF141 "RING finger protein 141" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 CTD:50862 eggNOG:NOG273394
HOGENOM:HOG000247058 HOVERGEN:HBG055763 OrthoDB:EOG4GHZQ3
EMBL:DQ273566 RefSeq:NP_001041484.1 UniGene:Cfa.10740
ProteinModelPortal:Q2XNS1 SMR:Q2XNS1 GeneID:476852 KEGG:cfa:476852
InParanoid:Q2XNS1 NextBio:20852447 Uniprot:Q2XNS1
Length = 231
Score = 125 (49.1 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 73 LEREDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTKSESCPFCRGSMKRVNSEDLWVLT 132
L E+EC IC++ ++LP C H+ C KC W+ + +CP CR M N WV++
Sbjct: 150 LTDEEECCICMDGRADLILP-CAHSFCQKCIDKWSDRHRNCPICRLQMTGANES--WVVS 206
>UNIPROTKB|I3LDC9 [details] [associations]
symbol:RNF141 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00390000003145
OMA:MWMGRVK EMBL:FP312948 Ensembl:ENSSSCT00000022900 Uniprot:I3LDC9
Length = 231
Score = 124 (48.7 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 73 LEREDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTKSESCPFCRGSMKRVNSEDLWVLT 132
L E+EC IC++ ++LP C H+ C KC W+ + +CP CR M N WV++
Sbjct: 150 LTDEEECCICMDGRADLILP-CTHSFCQKCIDKWSDRHRNCPICRLQMTGANES--WVVS 206
>UNIPROTKB|I3LUY7 [details] [associations]
symbol:I3LUY7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051301 "cell division" evidence=IEA] [GO:0016881
"acid-amino acid ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017335 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00400000022349 PANTHER:PTHR15067:SF3 EMBL:CU855572
Ensembl:ENSSSCT00000029099 OMA:VEMKEHR Uniprot:I3LUY7
Length = 135
Score = 113 (44.8 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 22/67 (32%), Positives = 32/67 (47%)
Query: 73 LEREDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTKSESCPFCRGSMKRVNSEDLWVLT 132
LE E +C IC E + V NC H+ C C W + CP CR +K + L +
Sbjct: 47 LENELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKRKVECPICRKDIKS-KTHSLVLDN 105
Query: 133 CTDDVID 139
C + ++D
Sbjct: 106 CINKMVD 112
>UNIPROTKB|Q7ZX20 [details] [associations]
symbol:rnf8-a "E3 ubiquitin-protein ligase RNF8-A"
species:8355 "Xenopus laevis" [GO:0000151 "ubiquitin ligase
complex" evidence=ISS] [GO:0000781 "chromosome, telomeric region"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006302 "double-strand
break repair" evidence=ISS] [GO:0006303 "double-strand break repair
via nonhomologous end joining" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0007286 "spermatid development" evidence=ISS] [GO:0008270 "zinc
ion binding" evidence=ISS] [GO:0010212 "response to ionizing
radiation" evidence=ISS] [GO:0033522 "histone H2A ubiquitination"
evidence=ISS] [GO:0033523 "histone H2B ubiquitination"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0042803 "protein homodimerization activity" evidence=ISS]
[GO:0043486 "histone exchange" evidence=ISS] [GO:0045190 "isotype
switching" evidence=ISS] [GO:0045739 "positive regulation of DNA
repair" evidence=ISS] [GO:0045900 "negative regulation of
translational elongation" evidence=ISS] [GO:0070534 "protein
K63-linked ubiquitination" evidence=ISS] [GO:0070535 "histone H2A
K63-linked ubiquitination" evidence=ISS] [GO:0070936 "protein
K48-linked ubiquitination" evidence=ISS] InterPro:IPR001841
InterPro:IPR000253 InterPro:IPR008984 InterPro:IPR017335
Pfam:PF00498 PIRSF:PIRSF037950 PROSITE:PS50006 PROSITE:PS50089
SMART:SM00184 SMART:SM00240 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005634 GO:GO:0042803 GO:GO:0051301 GO:GO:0007286
GO:GO:0046872 GO:GO:0008270 GO:GO:0003682 Gene3D:2.60.200.20
SUPFAM:SSF49879 GO:GO:0010212 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0043486 GO:GO:0045190 GO:GO:0004842
GO:GO:0042393 GO:GO:0045739 GO:GO:0000151 InterPro:IPR017907
GO:GO:0070936 GO:GO:0000781 GO:GO:0006303 GO:GO:0033523
GO:GO:0045900 GO:GO:0035861 GO:GO:0070535 EMBL:BC046256
RefSeq:NP_001080384.1 UniGene:Xl.75515 HSSP:O76064
ProteinModelPortal:Q7ZX20 SMR:Q7ZX20 PRIDE:Q7ZX20 GeneID:380076
KEGG:xla:380076 CTD:380076 Xenbase:XB-GENE-6254223
HOVERGEN:HBG023954 KO:K10667 Uniprot:Q7ZX20
Length = 540
Score = 123 (48.4 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 22/67 (32%), Positives = 34/67 (50%)
Query: 73 LEREDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTKSESCPFCRGSMKRVNSEDLWVLT 132
L+ E +C IC E + V NC H+ C C ++W + E CP CR + + L +
Sbjct: 376 LDNELQCIICSEHFIEAVTLNCAHSFCSYCIKSWKKRKEECPICRQEIV-TETRSLVLDN 434
Query: 133 CTDDVID 139
C D ++D
Sbjct: 435 CIDSMVD 441
>UNIPROTKB|Q6NRG0 [details] [associations]
symbol:rnf8-b "E3 ubiquitin-protein ligase RNF8-B"
species:8355 "Xenopus laevis" [GO:0000151 "ubiquitin ligase
complex" evidence=ISS] [GO:0000781 "chromosome, telomeric region"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006302 "double-strand
break repair" evidence=ISS] [GO:0006303 "double-strand break repair
via nonhomologous end joining" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0007286 "spermatid development" evidence=ISS] [GO:0008270 "zinc
ion binding" evidence=ISS] [GO:0010212 "response to ionizing
radiation" evidence=ISS] [GO:0033522 "histone H2A ubiquitination"
evidence=ISS] [GO:0033523 "histone H2B ubiquitination"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0042803 "protein homodimerization activity" evidence=ISS]
[GO:0043486 "histone exchange" evidence=ISS] [GO:0045190 "isotype
switching" evidence=ISS] [GO:0045739 "positive regulation of DNA
repair" evidence=ISS] [GO:0045900 "negative regulation of
translational elongation" evidence=ISS] [GO:0070534 "protein
K63-linked ubiquitination" evidence=ISS] [GO:0070535 "histone H2A
K63-linked ubiquitination" evidence=ISS] [GO:0070936 "protein
K48-linked ubiquitination" evidence=ISS] InterPro:IPR001841
InterPro:IPR000253 InterPro:IPR008984 InterPro:IPR017335
Pfam:PF00498 PIRSF:PIRSF037950 PROSITE:PS50006 PROSITE:PS50089
SMART:SM00184 SMART:SM00240 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005634 GO:GO:0042803 GO:GO:0051301 GO:GO:0007286
GO:GO:0046872 GO:GO:0008270 GO:GO:0003682 Gene3D:2.60.200.20
SUPFAM:SSF49879 GO:GO:0010212 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0043486 GO:GO:0045190 GO:GO:0004842
GO:GO:0042393 GO:GO:0045739 GO:GO:0000151 InterPro:IPR017907
GO:GO:0070936 GO:GO:0000781 GO:GO:0006303 GO:GO:0033523
GO:GO:0045900 GO:GO:0035861 GO:GO:0070535 HSSP:O76064
HOVERGEN:HBG023954 KO:K10667 EMBL:BC070792 RefSeq:NP_001084862.1
UniGene:Xl.4442 ProteinModelPortal:Q6NRG0 SMR:Q6NRG0 GeneID:431911
KEGG:xla:431911 CTD:431911 Xenbase:XB-GENE-5914276 Uniprot:Q6NRG0
Length = 532
Score = 122 (48.0 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 22/67 (32%), Positives = 34/67 (50%)
Query: 73 LEREDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTKSESCPFCRGSMKRVNSEDLWVLT 132
L+ E +C IC E + V NC H+ C C ++W + E CP CR + + L +
Sbjct: 371 LDNELQCIICSEHFIEAVTLNCAHSFCSYCIKSWRKRKEECPICRQEILS-ETRSLVLDN 429
Query: 133 CTDDVID 139
C D ++D
Sbjct: 430 CIDSMVD 436
>TAIR|locus:2173772 [details] [associations]
symbol:AT5G40250 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000239562 EMBL:AB010699 EMBL:AK176313 IPI:IPI00524067
RefSeq:NP_198841.1 UniGene:At.51073 ProteinModelPortal:Q9FL07
SMR:Q9FL07 EnsemblPlants:AT5G40250.1 GeneID:834023
KEGG:ath:AT5G40250 TAIR:At5g40250 eggNOG:NOG264344
InParanoid:Q9FL07 OMA:FHYKEIV PhylomeDB:Q9FL07
ProtClustDB:CLSN2687536 Genevestigator:Q9FL07 GermOnline:AT5G40250
Uniprot:Q9FL07
Length = 376
Score = 119 (46.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 33/116 (28%), Positives = 52/116 (44%)
Query: 14 PSLTSPGRKATIREFY--GVILPSLQRL-HSNLRELDDAKIENLEIGSFDRMRGDSQVGS 70
PS T+ R E + LQ+L H N LD A I+ L + + + G + G
Sbjct: 73 PSATASSRSNRFPEISTSDALQRQLQQLFHLNDSGLDQAFIDALPVFHYKEIVGSAGGGG 132
Query: 71 ADLERED--ECGICL----EPCTKMVLPNCCHAMCIKCYRNWNTKSESCPFCRGSM 120
+ ++ +C +CL E +LP C HA + C W + +CP CRG++
Sbjct: 133 GNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCRGTL 188
>TAIR|locus:2074678 [details] [associations]
symbol:AT3G11110 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0009741 "response to brassinosteroid
stimulus" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC009991 EMBL:AC073395 EMBL:BT031381 IPI:IPI00524656
RefSeq:NP_187722.1 UniGene:At.53265 ProteinModelPortal:Q9SRM0
SMR:Q9SRM0 EnsemblPlants:AT3G11110.1 GeneID:820282
KEGG:ath:AT3G11110 TAIR:At3g11110 eggNOG:NOG241452
HOGENOM:HOG000238431 InParanoid:Q9SRM0 OMA:EKECCIC PhylomeDB:Q9SRM0
ProtClustDB:CLSN2684057 Genevestigator:Q9SRM0 GermOnline:AT3G11110
Uniprot:Q9SRM0
Length = 158
Score = 109 (43.4 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 34/84 (40%), Positives = 41/84 (48%)
Query: 46 LDDAKIENLEIGSFDRMRGDSQVGSADLEREDECGICL---EPCTKM-VLPNCCHAMCIK 101
LD A+I +L + R R A+ E E EC ICL E KM VLP C H +
Sbjct: 81 LDPAEIRSLPVVLCRRER-------AEEEEEKECCICLGGFEEGEKMKVLPPCSHCYHCE 133
Query: 102 CYRNWNTKSESCPFCRGSMKRVNS 125
C W SCP CR S+ RV+S
Sbjct: 134 CVDRWLKTESSCPLCRVSI-RVDS 156
>TAIR|locus:2140069 [details] [associations]
symbol:AT4G40070 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AL161596 eggNOG:COG5540 EMBL:AL035708 HOGENOM:HOG000239182
EMBL:AF419600 EMBL:BT000540 IPI:IPI00542846 PIR:H85474 PIR:T06113
RefSeq:NP_568080.2 UniGene:At.27385 ProteinModelPortal:Q8W571
SMR:Q8W571 PRIDE:Q8W571 EnsemblPlants:AT4G40070.1 GeneID:830170
KEGG:ath:AT4G40070 TAIR:At4g40070 OMA:CRSGEES PhylomeDB:Q8W571
ProtClustDB:CLSN2918858 Genevestigator:Q8W571 GermOnline:AT4G40070
Uniprot:Q8W571
Length = 323
Score = 118 (46.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 36/109 (33%), Positives = 53/109 (48%)
Query: 46 LDDAKIENLEIGSFDRMRGDSQVGSADLEREDECGICLEPC----TKMVLPNCCHAMCIK 101
LD+A +E+ + ++ ++ +S++GS DLE C ICL T +LP C H I
Sbjct: 96 LDNAVVESFPVFAYSSVK-ESKIGSKDLE----CAICLNELEDHETVRLLPICNHLFHID 150
Query: 102 CYRNWNTKSESCPFCRGSM----KRVNSEDLWV-LTCTDD--VIDPETV 143
C W +CP CR ++ + ED V L D V+D ETV
Sbjct: 151 CIDTWLYSHATCPVCRSNLTAKSNKPGDEDDGVPLAAMRDHVVVDIETV 199
>DICTYBASE|DDB_G0292408 [details] [associations]
symbol:DDB_G0292408 "RING finger protein 141"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
dictyBase:DDB_G0292408 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AAFI02000190
InterPro:IPR017907 eggNOG:NOG273394 RefSeq:XP_629590.1
ProteinModelPortal:Q54DA6 EnsemblProtists:DDB0184364 GeneID:8628650
KEGG:ddi:DDB_G0292408 InParanoid:Q54DA6 OMA:TETILWK Uniprot:Q54DA6
Length = 213
Score = 114 (45.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 34/118 (28%), Positives = 53/118 (44%)
Query: 11 DDRPSLTSPGRKATIREFYGVILPSLQRLHSNLRELDDAKIENLEIGSFDRMRGDSQVGS 70
++ P L S K T EFY L ++Q L+ E +D+K +N +
Sbjct: 79 NEEPILNS---KLTFGEFYS-FLNNIQ-LYF---EKEDSKNKNNSTTIATTTTTAEEKFK 130
Query: 71 ADLEREDECGICLEP-CTKMVLPNCCHAMCIKCYRNWNTKSESCPFCRGSMKRVNSED 127
+ E ++ C IC + T +V +C HA C +C +W ++S CP CR N D
Sbjct: 131 IEEEEDNLCPICFDKEATFVVSSDCFHAFCPECAEDWKSRSNLCPLCRRENNNSNKLD 188
>UNIPROTKB|Q2HJ46 [details] [associations]
symbol:RNF8 "E3 ubiquitin-protein ligase RNF8" species:9913
"Bos taurus" [GO:0045190 "isotype switching" evidence=ISS]
[GO:0033522 "histone H2A ubiquitination" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0070936 "protein
K48-linked ubiquitination" evidence=ISS] [GO:0045900 "negative
regulation of translational elongation" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0042803 "protein homodimerization activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0043486 "histone
exchange" evidence=ISS] [GO:0007286 "spermatid development"
evidence=ISS] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=ISS] [GO:0070535 "histone H2A
K63-linked ubiquitination" evidence=ISS] [GO:0006974 "response to
DNA damage stimulus" evidence=ISS] [GO:0000781 "chromosome,
telomeric region" evidence=ISS] [GO:0070534 "protein K63-linked
ubiquitination" evidence=ISS] [GO:0000151 "ubiquitin ligase
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0045739 "positive regulation of DNA repair" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0010212 "response to ionizing
radiation" evidence=ISS] [GO:0033523 "histone H2B ubiquitination"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0030496 "midbody" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000253 InterPro:IPR008984
InterPro:IPR017335 Pfam:PF00498 Pfam:PF13639 PIRSF:PIRSF037950
PROSITE:PS50006 PROSITE:PS50089 SMART:SM00184 SMART:SM00240
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005634 GO:GO:0042803
GO:GO:0051301 GO:GO:0007067 GO:GO:0007286 GO:GO:0046872
GO:GO:0008270 GO:GO:0003682 Gene3D:2.60.200.20 SUPFAM:SSF49879
GO:GO:0010212 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0043486 GO:GO:0045190 GO:GO:0004842 GO:GO:0030496
GO:GO:0042393 GO:GO:0045739 GO:GO:0000151 InterPro:IPR017907
GO:GO:0070936 GO:GO:0000781 GO:GO:0006303 HSSP:P25916 GO:GO:0033523
GO:GO:0045900 GO:GO:0035861 GO:GO:0070535 HOVERGEN:HBG023954
KO:K10667 EMBL:BC113317 IPI:IPI00721755 RefSeq:NP_001039681.1
UniGene:Bt.41339 ProteinModelPortal:Q2HJ46 SMR:Q2HJ46 STRING:Q2HJ46
PRIDE:Q2HJ46 Ensembl:ENSBTAT00000010959 GeneID:515933
KEGG:bta:515933 CTD:9025 eggNOG:NOG242257
GeneTree:ENSGT00400000022349 HOGENOM:HOG000154169 InParanoid:Q2HJ46
OMA:EVTEEDW OrthoDB:EOG4TF0KP NextBio:20872060
PANTHER:PTHR15067:SF3 Uniprot:Q2HJ46
Length = 487
Score = 119 (46.9 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 32/117 (27%), Positives = 49/117 (41%)
Query: 29 YGVILPSLQRLHSNLRELDDAKIENLEIGSFDRMRGDSQVGSA-----D-LEREDECGIC 82
Y ++ L R N + AK + LE ++ + +Q D LE E +C IC
Sbjct: 349 YRSLVEELNRSKKNFEAIIQAKDKELEQTKEEKEKVQAQKEEVLSHMNDVLENELQCIIC 408
Query: 83 LEPCTKMVLPNCCHAMCIKCYRNWNTKSESCPFCRGSMKRVNSEDLWVLTCTDDVID 139
E + V NC H+ C C W + CP CR +K + L + C ++D
Sbjct: 409 SEYFVEAVTLNCAHSFCSYCINEWMKRKVECPICRKDIKS-KTRSLVLDNCISKMVD 464
>ZFIN|ZDB-GENE-040426-849 [details] [associations]
symbol:rnf8 "ring finger protein 8, E3 ubiquitin
protein ligase" species:7955 "Danio rerio" [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0016881 "acid-amino acid ligase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA;ISS] [GO:0051301 "cell division" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0000781
"chromosome, telomeric region" evidence=ISS] [GO:0003682 "chromatin
binding" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0043486 "histone exchange" evidence=ISS]
[GO:0045190 "isotype switching" evidence=ISS] [GO:0042393 "histone
binding" evidence=ISS] [GO:0045739 "positive regulation of DNA
repair" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0070534 "protein K63-linked
ubiquitination" evidence=ISS] [GO:0070936 "protein K48-linked
ubiquitination" evidence=ISS] [GO:0000151 "ubiquitin ligase
complex" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0010212 "response to ionizing
radiation" evidence=ISS] [GO:0007286 "spermatid development"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0045900 "negative regulation of translational
elongation" evidence=ISS] [GO:0070535 "histone H2A K63-linked
ubiquitination" evidence=ISS] [GO:0006303 "double-strand break
repair via nonhomologous end joining" evidence=ISS] [GO:0033522
"histone H2A ubiquitination" evidence=ISS] [GO:0033523 "histone H2B
ubiquitination" evidence=ISS] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] InterPro:IPR001841 InterPro:IPR000253
InterPro:IPR008984 InterPro:IPR017335 Pfam:PF00498
PIRSF:PIRSF037950 PROSITE:PS50006 PROSITE:PS50089 SMART:SM00184
SMART:SM00240 Prosite:PS00518 ZFIN:ZDB-GENE-040426-849
GO:GO:0005634 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006974 GO:GO:0016567 Gene3D:2.60.200.20 SUPFAM:SSF49879
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0016881
InterPro:IPR017907 GeneTree:ENSGT00400000022349 EMBL:CU660013
Ensembl:ENSDART00000151429 Bgee:I3IRX0 Uniprot:I3IRX0
Length = 531
Score = 119 (46.9 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 32/131 (24%), Positives = 57/131 (43%)
Query: 32 ILPSLQRLHSNLRELDDAKIENLEIGSFDRMRGDSQVGSAD------LEREDECGICLEP 85
++ L+ +E+ AK + LE+ ++ + +Q LE E +C IC E
Sbjct: 339 VIEELKHARQGFKEVLQAKDKELEVTKEEKEKAKAQKEEVVTQMTEVLESELQCSICSEL 398
Query: 86 CTKMVLPNCCHAMCIKCYRNWNTKSESCPFCRGSMKRVNSEDLWVLTCTDDVIDPETVSK 145
+ V NC H+ C C W + + CP C ++ + L + C D ++ E +S
Sbjct: 399 FIEAVTLNCAHSFCQHCISEWRNRKDKCPMCWQNITS-QTRSLVLDNCIDRMV--ENLSA 455
Query: 146 EDLLRFYLYIN 156
+ R + IN
Sbjct: 456 DMRERRLVLIN 466
>TAIR|locus:2018334 [details] [associations]
symbol:AT1G04360 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 EMBL:AC000104 Gene3D:3.30.40.10 InterPro:IPR013083
eggNOG:COG5540 HOGENOM:HOG000034161 ProtClustDB:CLSN2681784
EMBL:BT004287 EMBL:BT006138 IPI:IPI00526956 PIR:B86175
RefSeq:NP_171931.1 UniGene:At.42456 ProteinModelPortal:P93823
SMR:P93823 PRIDE:P93823 EnsemblPlants:AT1G04360.1 GeneID:839540
KEGG:ath:AT1G04360 TAIR:At1g04360 InParanoid:P93823 OMA:HIDCIDI
PhylomeDB:P93823 Genevestigator:P93823 GermOnline:AT1G04360
Uniprot:P93823
Length = 381
Score = 117 (46.2 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 27/86 (31%), Positives = 41/86 (47%)
Query: 40 HSNLRELDDAKIENLEIGSFDRMRGDSQVGSADLERED-ECGICL---EPCTKM-VLPNC 94
H R LD++ I + + F + D G D + EC +CL + K+ ++PNC
Sbjct: 96 HEVNRGLDESAIRAIPVFKFKKR--DVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNC 153
Query: 95 CHAMCIKCYRNWNTKSESCPFCRGSM 120
CH I C W + +CP CR S+
Sbjct: 154 CHVFHIDCIDIWLQGNANCPLCRTSV 179
>TAIR|locus:2173497 [details] [associations]
symbol:AT5G37200 "AT5G37200" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0016757
"transferase activity, transferring glycosyl groups" evidence=ISS]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:NOG246550
HOGENOM:HOG000131725 EMBL:AP000605 IPI:IPI00517594
RefSeq:NP_198536.1 UniGene:At.55180 ProteinModelPortal:Q9FG51
SMR:Q9FG51 EnsemblPlants:AT5G37200.1 GeneID:833694
KEGG:ath:AT5G37200 TAIR:At5g37200 InParanoid:Q9FG51
PhylomeDB:Q9FG51 ProtClustDB:CLSN2686890 Genevestigator:Q9FG51
Uniprot:Q9FG51
Length = 217
Score = 111 (44.1 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 27/75 (36%), Positives = 36/75 (48%)
Query: 59 FDRMRGDSQVGSADLEREDE-CGICLEPCTK-----MVLPNCCHAMCIKCYRNWNTKSES 112
F R+ + +V SADLE EDE C IC+E ++ + +P+C H C W S
Sbjct: 138 FHRLVEEQRVESADLEEEDETCSICIEKFSESHEDIIRVPDCLHLFHQGCLFEWLGLQNS 197
Query: 113 CPFCRGSMKRVNSED 127
CP CR ED
Sbjct: 198 CPLCRKVPYEEEDED 212
>UNIPROTKB|F8WD60 [details] [associations]
symbol:RNF168 "E3 ubiquitin-protein ligase RNF168"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC092933 EMBL:AC117490 HGNC:HGNC:26661 IPI:IPI00925077
ProteinModelPortal:F8WD60 SMR:F8WD60 Ensembl:ENST00000437070
ArrayExpress:F8WD60 Bgee:F8WD60 Uniprot:F8WD60
Length = 116
Score = 96 (38.9 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 76 EDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTKSE-SCPFCRGSMKRVNS 125
E +CGIC+E + V C H +C C+++ K+ CPFCR +RV+S
Sbjct: 13 ECQCGICMEILVEPVTLPCNHTLCKPCFQSTVEKASLCCPFCR---RRVSS 60
>TAIR|locus:2098505 [details] [associations]
symbol:AT3G07200 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:CP002686 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 HSSP:P38398
EMBL:AC012395 ProtClustDB:CLSN2689957 IPI:IPI00548065
RefSeq:NP_001078119.1 RefSeq:NP_187376.1 UniGene:At.40383
ProteinModelPortal:Q9SFV0 SMR:Q9SFV0 EnsemblPlants:AT3G07200.1
EnsemblPlants:AT3G07200.2 GeneID:819908 KEGG:ath:AT3G07200
TAIR:At3g07200 InParanoid:Q9SFV0 OMA:NRRTRRE PhylomeDB:Q9SFV0
Genevestigator:Q9SFV0 Uniprot:Q9SFV0
Length = 182
Score = 108 (43.1 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 27/88 (30%), Positives = 41/88 (46%)
Query: 41 SNLRELDDAKIENLEIGSFDRMRGDSQVGSADLEREDECGICLEPCTKMVLPNCCHAMCI 100
S R D ++++E+ ++ R V E + C ICL P T+ V C H C
Sbjct: 92 STRRRSDQTSVDSVEL---NKPRKSKAVAPPVEEPKFSCPICLCPFTQEVSTKCGHIFCK 148
Query: 101 KCYRNWNTKSESCPFCRGSMKRVNSEDL 128
KC +N + CP CR K++ +DL
Sbjct: 149 KCIKNALSLQAKCPTCR---KKITVKDL 173
>UNIPROTKB|E9PN08 [details] [associations]
symbol:RNF5 "E3 ubiquitin-protein ligase RNF5" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:BX284686 HGNC:HGNC:10068 IPI:IPI00514241
ProteinModelPortal:E9PN08 SMR:E9PN08 Ensembl:ENST00000472060
ArrayExpress:E9PN08 Bgee:E9PN08 Uniprot:E9PN08
Length = 91
Score = 94 (38.1 bits), Expect = 0.00011, P = 0.00011
Identities = 18/48 (37%), Positives = 23/48 (47%)
Query: 78 ECGICLEPCTKMVLPNCCHAMCIKCYRNW-NTKSE--SCPFCRGSMKR 122
EC ICLE + V+ C H C C W T+ E CP C+ + R
Sbjct: 26 ECNICLETAREAVVSVCGHLYCWPCLHQWLETRPERQECPVCKAGISR 73
>UNIPROTKB|E2RKD8 [details] [associations]
symbol:RNF8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070936 "protein K48-linked ubiquitination"
evidence=IEA] [GO:0070535 "histone H2A K63-linked ubiquitination"
evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0045900 "negative regulation of translational
elongation" evidence=IEA] [GO:0045739 "positive regulation of DNA
repair" evidence=IEA] [GO:0045190 "isotype switching" evidence=IEA]
[GO:0043486 "histone exchange" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0033523 "histone H2B ubiquitination"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0010212 "response to ionizing radiation"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007286 "spermatid development" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0006303 "double-strand break repair via nonhomologous end
joining" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0000781
"chromosome, telomeric region" evidence=IEA] [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000253
InterPro:IPR008984 InterPro:IPR017335 Pfam:PF00498 Pfam:PF13639
PIRSF:PIRSF037950 PROSITE:PS50006 PROSITE:PS50089 SMART:SM00184
SMART:SM00240 Prosite:PS00518 GO:GO:0005634 GO:GO:0051301
GO:GO:0046872 GO:GO:0008270 GO:GO:0003682 Gene3D:2.60.200.20
SUPFAM:SSF49879 GO:GO:0010212 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006302 GO:GO:0016881 GO:GO:0045739 GO:GO:0000151
InterPro:IPR017907 GO:GO:0033523 GeneTree:ENSGT00400000022349
PANTHER:PTHR15067:SF3 EMBL:AAEX03008298 Ensembl:ENSCAFT00000002283
Uniprot:E2RKD8
Length = 487
Score = 114 (45.2 bits), Expect = 0.00012, P = 0.00012
Identities = 28/96 (29%), Positives = 44/96 (45%)
Query: 44 RELDDAKIENLEIGSFDRMRGDSQVGSADLEREDECGICLEPCTKMVLPNCCHAMCIKCY 103
+EL+ K E ++ + + S V LE E +C IC E + V NC H+ C C
Sbjct: 372 KELEQTKEEKEKMQA-QKEEVLSHVNDV-LENELQCIICSEYFIEAVTLNCAHSFCSYCI 429
Query: 104 RNWNTKSESCPFCRGSMKRVNSEDLWVLTCTDDVID 139
W + CP CR +K + L + C + ++D
Sbjct: 430 NEWMKRKVECPICRKDIKS-KTHSLVLDNCINKMVD 464
>UNIPROTKB|J9P6M8 [details] [associations]
symbol:RNF8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0016881 "acid-amino acid ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000253 InterPro:IPR008984
InterPro:IPR017335 Pfam:PF00498 Pfam:PF13639 PIRSF:PIRSF037950
PROSITE:PS50006 PROSITE:PS50089 SMART:SM00184 SMART:SM00240
Prosite:PS00518 GO:GO:0005634 GO:GO:0051301 GO:GO:0046872
GO:GO:0008270 GO:GO:0006974 GO:GO:0016567 Gene3D:2.60.200.20
SUPFAM:SSF49879 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0016881
InterPro:IPR017907 KO:K10667 CTD:9025 GeneTree:ENSGT00400000022349
OMA:EVTEEDW PANTHER:PTHR15067:SF3 EMBL:AAEX03008298
RefSeq:XP_864730.1 ProteinModelPortal:J9P6M8
Ensembl:ENSCAFT00000047572 GeneID:481775 KEGG:cfa:481775
Uniprot:J9P6M8
Length = 487
Score = 114 (45.2 bits), Expect = 0.00012, P = 0.00012
Identities = 28/96 (29%), Positives = 44/96 (45%)
Query: 44 RELDDAKIENLEIGSFDRMRGDSQVGSADLEREDECGICLEPCTKMVLPNCCHAMCIKCY 103
+EL+ K E ++ + + S V LE E +C IC E + V NC H+ C C
Sbjct: 372 KELEQTKEEKEKMQA-QKEEVLSHVNDV-LENELQCIICSEYFIEAVTLNCAHSFCSYCI 429
Query: 104 RNWNTKSESCPFCRGSMKRVNSEDLWVLTCTDDVID 139
W + CP CR +K + L + C + ++D
Sbjct: 430 NEWMKRKVECPICRKDIKS-KTHSLVLDNCINKMVD 464
>UNIPROTKB|A2AE50 [details] [associations]
symbol:TRIM26 "Tripartite motif-containing protein 26"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL662832
EMBL:AL844220 EMBL:BX927221 EMBL:CR759838 EMBL:CR788282
EMBL:BX248419 EMBL:CR388382 EMBL:BX927189 HGNC:HGNC:12962
EMBL:AL662782 EMBL:AL671855 EMBL:AL845450 IPI:IPI00642517
SMR:A2AE50 Ensembl:ENST00000427612 Ensembl:ENST00000429583
Ensembl:ENST00000431641 Ensembl:ENST00000434785
Ensembl:ENST00000435387 Ensembl:ENST00000440149
Ensembl:ENST00000445457 Ensembl:ENST00000447942
HOGENOM:HOG000060139 HOVERGEN:HBG084408 Uniprot:A2AE50
Length = 122
Score = 93 (37.8 bits), Expect = 0.00015, P = 0.00015
Identities = 24/76 (31%), Positives = 32/76 (42%)
Query: 73 LEREDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTKSES---CPFCRGSMKRVNSEDLW 129
LE E C ICL+ V +C H C C + S S CP C+ K+ N +W
Sbjct: 10 LEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPFKKENIRPVW 69
Query: 130 VLTCTDDVIDPETVSK 145
L + I+ V K
Sbjct: 70 QLASLVENIERLKVDK 85
>UNIPROTKB|F1RVS2 [details] [associations]
symbol:LOC100153408 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0051301 "cell division" evidence=IEA] [GO:0016881
"acid-amino acid ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000253 InterPro:IPR008984
InterPro:IPR017335 Pfam:PF00498 Pfam:PF13639 PIRSF:PIRSF037950
PROSITE:PS50006 PROSITE:PS50089 SMART:SM00184 SMART:SM00240
Prosite:PS00518 GO:GO:0005634 GO:GO:0051301 GO:GO:0046872
GO:GO:0008270 GO:GO:0006974 GO:GO:0016567 Gene3D:2.60.200.20
SUPFAM:SSF49879 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0016881
InterPro:IPR017907 GeneTree:ENSGT00400000022349
PANTHER:PTHR15067:SF3 EMBL:CU467025 ProteinModelPortal:F1RVS2
Ensembl:ENSSSCT00000001757 ArrayExpress:F1RVS2 Uniprot:F1RVS2
Length = 487
Score = 113 (44.8 bits), Expect = 0.00016, P = 0.00016
Identities = 22/67 (32%), Positives = 32/67 (47%)
Query: 73 LEREDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTKSESCPFCRGSMKRVNSEDLWVLT 132
LE E +C IC E + V NC H+ C C W + CP CR +K + L +
Sbjct: 399 LENELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKRKVECPICRKDIKS-KTHSLVLDN 457
Query: 133 CTDDVID 139
C + ++D
Sbjct: 458 CINKMVD 464
>UNIPROTKB|I3L6W2 [details] [associations]
symbol:LOC100153408 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0051301 "cell division" evidence=IEA] [GO:0016881
"acid-amino acid ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000253 InterPro:IPR008984
InterPro:IPR017335 Pfam:PF00498 Pfam:PF13639 PIRSF:PIRSF037950
PROSITE:PS50006 PROSITE:PS50089 SMART:SM00184 SMART:SM00240
Prosite:PS00518 GO:GO:0005634 GO:GO:0051301 GO:GO:0046872
GO:GO:0008270 GO:GO:0006974 GO:GO:0016567 Gene3D:2.60.200.20
SUPFAM:SSF49879 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0016881
InterPro:IPR017907 GeneTree:ENSGT00400000022349 OMA:EVTEEDW
PANTHER:PTHR15067:SF3 EMBL:CU467025 Ensembl:ENSSSCT00000028776
Uniprot:I3L6W2
Length = 488
Score = 113 (44.8 bits), Expect = 0.00016, P = 0.00016
Identities = 22/67 (32%), Positives = 32/67 (47%)
Query: 73 LEREDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTKSESCPFCRGSMKRVNSEDLWVLT 132
LE E +C IC E + V NC H+ C C W + CP CR +K + L +
Sbjct: 399 LENELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKRKVECPICRKDIKS-KTHSLVLDN 457
Query: 133 CTDDVID 139
C + ++D
Sbjct: 458 CINKMVD 464
>TAIR|locus:2169063 [details] [associations]
symbol:AT5G47610 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 EMBL:AB025628 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000237642 EMBL:AK175469 EMBL:AK176643 EMBL:AY085503
IPI:IPI00529585 RefSeq:NP_199572.1 UniGene:At.29885
ProteinModelPortal:Q9FGJ6 SMR:Q9FGJ6 EnsemblPlants:AT5G47610.1
GeneID:834811 KEGG:ath:AT5G47610 TAIR:At5g47610 eggNOG:NOG304426
InParanoid:Q9FGJ6 OMA:VISALIC PhylomeDB:Q9FGJ6
ProtClustDB:CLSN2714317 Genevestigator:Q9FGJ6 GermOnline:AT5G47610
Uniprot:Q9FGJ6
Length = 166
Score = 104 (41.7 bits), Expect = 0.00018, P = 0.00018
Identities = 32/95 (33%), Positives = 41/95 (43%)
Query: 39 LHSNLRELDDAKIENLEIGSFDRMRGDSQVGSADLE---REDECGICLEPCTK----MVL 91
L L DD K + E + + V S+DLE E EC ICL + VL
Sbjct: 65 LRPTLETEDDHKPDP-EAAASSTPTTPTLVYSSDLELAGAEAECAICLSEFEQGESIQVL 123
Query: 92 PNCCHAMCIKCYRNWNTKSESCPFCRGSMKRVNSE 126
C H +KC W + SCP CR S+ +SE
Sbjct: 124 EKCQHGFHVKCIHKWLSTRSSCPTCRTSIFSQHSE 158
>MGI|MGI:1929069 [details] [associations]
symbol:Rnf8 "ring finger protein 8" species:10090 "Mus
musculus" [GO:0000151 "ubiquitin ligase complex" evidence=ISO]
[GO:0000781 "chromosome, telomeric region" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IMP] [GO:0005634
"nucleus" evidence=ISO] [GO:0005694 "chromosome" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006302 "double-strand
break repair" evidence=ISO] [GO:0006303 "double-strand break repair
via nonhomologous end joining" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO;IDA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007286 "spermatid development" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=ISO] [GO:0010212 "response
to ionizing radiation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016881 "acid-amino acid ligase activity" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=ISO]
[GO:0033522 "histone H2A ubiquitination" evidence=ISO;IMP]
[GO:0033523 "histone H2B ubiquitination" evidence=IMP] [GO:0035861
"site of double-strand break" evidence=ISO] [GO:0042393 "histone
binding" evidence=ISO;IMP] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043486 "histone exchange"
evidence=IMP] [GO:0045190 "isotype switching" evidence=IMP]
[GO:0045739 "positive regulation of DNA repair" evidence=ISO]
[GO:0045900 "negative regulation of translational elongation"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=ISO] [GO:0070534 "protein K63-linked
ubiquitination" evidence=ISO] [GO:0070535 "histone H2A K63-linked
ubiquitination" evidence=ISO] [GO:0070936 "protein K48-linked
ubiquitination" evidence=ISO] InterPro:IPR001841 InterPro:IPR000253
InterPro:IPR008984 InterPro:IPR017335 Pfam:PF00498
PIRSF:PIRSF037950 PROSITE:PS50006 PROSITE:PS50089 SMART:SM00184
SMART:SM00240 UniPathway:UPA00143 MGI:MGI:1929069 Prosite:PS00518
GO:GO:0005634 GO:GO:0042803 GO:GO:0051301 GO:GO:0007067
GO:GO:0007286 GO:GO:0046872 GO:GO:0008270 GO:GO:0003682
Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0010212 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0043486 GO:GO:0045190
GO:GO:0004842 GO:GO:0030496 GO:GO:0042393 GO:GO:0045739
GO:GO:0000151 InterPro:IPR017907 GO:GO:0070936 GO:GO:0000781
GO:GO:0006303 GO:GO:0033523 GO:GO:0045900 GO:GO:0035861
GermOnline:ENSMUSG00000024019 GO:GO:0070535 HOVERGEN:HBG023954
KO:K10667 CTD:9025 GeneTree:ENSGT00400000022349
HOGENOM:HOG000154169 PANTHER:PTHR15067:SF3 EMBL:AK076180
EMBL:AK147168 EMBL:CT010295 EMBL:BC021778 EMBL:AJ242721
IPI:IPI00551150 RefSeq:NP_067394.1 UniGene:Mm.305994
ProteinModelPortal:Q8VC56 SMR:Q8VC56 DIP:DIP-59448N
PhosphoSite:Q8VC56 PRIDE:Q8VC56 Ensembl:ENSMUST00000024817
GeneID:58230 KEGG:mmu:58230 UCSC:uc008btf.1 NextBio:314253
Bgee:Q8VC56 CleanEx:MM_RNF8 Genevestigator:Q8VC56 Uniprot:Q8VC56
Length = 488
Score = 111 (44.1 bits), Expect = 0.00031, P = 0.00031
Identities = 24/68 (35%), Positives = 33/68 (48%)
Query: 73 LEREDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTKSESCPFCRGSMK-RVNSEDLWVL 131
LE E +C IC E + V NC H+ C C W + CP CR ++ R NS L +
Sbjct: 400 LENELQCIICSEYFIEAVTLNCAHSFCSFCINEWMKRKVECPICRKDIESRTNS--LVLD 457
Query: 132 TCTDDVID 139
C ++D
Sbjct: 458 NCISKMVD 465
>FB|FBgn0035233 [details] [associations]
symbol:Pex10 "Peroxin 10" species:7227 "Drosophila
melanogaster" [GO:0007031 "peroxisome organization" evidence=ISS]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0005779 "integral to peroxisomal membrane" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0048137
"spermatocyte division" evidence=IMP] [GO:0007286 "spermatid
development" evidence=IMP] [GO:0007285 "primary spermatocyte
growth" evidence=IMP] [GO:0007112 "male meiosis cytokinesis"
evidence=IMP] InterPro:IPR001841 InterPro:IPR025654 PROSITE:PS50089
SMART:SM00184 InterPro:IPR006845 Prosite:PS00518 EMBL:AE014296
GO:GO:0007286 GO:GO:0046872 GO:GO:0008270 GO:GO:0005779
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0016558 GO:GO:0007112
InterPro:IPR017907 GO:GO:0048137 GO:GO:0007285 eggNOG:COG5574
KO:K13346 OMA:FRQRQRA PANTHER:PTHR23350 Pfam:PF04757 CTD:5192
GeneTree:ENSGT00510000048446 EMBL:AY069290 RefSeq:NP_647624.1
UniGene:Dm.2194 SMR:Q9W0D7 IntAct:Q9W0D7 MINT:MINT-1647351
EnsemblMetazoa:FBtr0072743 EnsemblMetazoa:FBtr0333397 GeneID:38182
KEGG:dme:Dmel_CG7864 UCSC:CG7864-RA FlyBase:FBgn0035233
InParanoid:Q9W0D7 OrthoDB:EOG4ZS7K2 GenomeRNAi:38182 NextBio:807389
Uniprot:Q9W0D7
Length = 299
Score = 108 (43.1 bits), Expect = 0.00034, P = 0.00034
Identities = 22/79 (27%), Positives = 37/79 (46%)
Query: 44 RELDDAKIENLEIGSFDRMRGDSQVGSADLEREDECGICLEPCTKMVLPNCCHAMCIKCY 103
RE ++E+++ + ++ S D +C +CLEP + L C H C C
Sbjct: 212 REHKRQQLESIKQAGKNFLQRSSSTKDVD-PNTPQCILCLEPRSDSSLTPCGHIFCWSCL 270
Query: 104 RNWNTKSESCPFCRGSMKR 122
W + + CP CR S+K+
Sbjct: 271 LEWLEERDECPLCRESLKK 289
>UNIPROTKB|F1NVB6 [details] [associations]
symbol:F1NVB6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0016605 "PML body" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000253 InterPro:IPR008984
Pfam:PF00498 Pfam:PF13639 PROSITE:PS50006 PROSITE:PS50089
SMART:SM00184 SMART:SM00240 Prosite:PS00518 GO:GO:0000166
GO:GO:0046872 GO:GO:0016605 GO:GO:0008270 Gene3D:2.60.200.20
SUPFAM:SSF49879 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004842 GO:GO:0000209 InterPro:IPR017907 GO:GO:0000278
GeneTree:ENSGT00400000022306 OMA:LYWGCAR EMBL:AADN02034798
IPI:IPI00597975 Ensembl:ENSGALT00000003414 Uniprot:F1NVB6
Length = 662
Score = 112 (44.5 bits), Expect = 0.00035, P = 0.00035
Identities = 30/87 (34%), Positives = 41/87 (47%)
Query: 39 LHSNLRELDDAKIENL-EIGSFDRMRGDSQVGSADLEREDECGICLEPCTKMV-LPNCCH 96
++ NLR++ A E + +IGS D S V +E C IC E V L C H
Sbjct: 257 VNRNLRKITAAPSECIIKIGSEDAKT--SNVKPDKMEETLTCIICQELLHDCVSLQPCMH 314
Query: 97 AMCIKCYRNWNTKSESCPFCRGSMKRV 123
C CY W +S CP CR ++R+
Sbjct: 315 TFCAACYSGWMERSSLCPTCRCPVERI 341
>TAIR|locus:2123446 [details] [associations]
symbol:AT4G10940 "AT4G10940" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50089 SMART:SM00184
SMART:SM00249 Prosite:PS00518 EMBL:CP002687 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907
IPI:IPI00519012 RefSeq:NP_567371.1 UniGene:At.54267
ProteinModelPortal:F4JN66 SMR:F4JN66 EnsemblPlants:AT4G10940.1
GeneID:826693 KEGG:ath:AT4G10940 OMA:DEDCCIE Uniprot:F4JN66
Length = 192
Score = 104 (41.7 bits), Expect = 0.00037, P = 0.00037
Identities = 27/84 (32%), Positives = 40/84 (47%)
Query: 69 GSADLEREDECGICLEPCTKMVLPNCC-HAMCIKCYRNWNTKSESCPFCRGSMKRVNSED 127
G ++E E CGIC++ + +CC H C +C NW+T CP C+ +
Sbjct: 22 GMTEIEGE-RCGICMDIIIDRGVLDCCQHWFCFECIDNWSTIMNLCPLCQ--------RE 72
Query: 128 LWVLTCTDDVIDPETVSK--EDLL 149
++TC V D SK EDL+
Sbjct: 73 FQLITCVP-VFDSGESSKVDEDLV 95
>DICTYBASE|DDB_G0282693 [details] [associations]
symbol:pex10 "peroxisome biogenesis factor 10"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0007031 "peroxisome organization"
evidence=IEA;ISS] [GO:0005779 "integral to peroxisomal membrane"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA;ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005777 "peroxisome" evidence=IEA] InterPro:IPR001841
InterPro:IPR025654 PROSITE:PS50089 SMART:SM00184 InterPro:IPR006845
dictyBase:DDB_G0282693 Prosite:PS00518 EMBL:AAFI02000047
GenomeReviews:CM000152_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0007031
GO:GO:0005779 GO:GO:0005778 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0016558 InterPro:IPR017907 eggNOG:COG5574 KO:K13346
OMA:FRQRQRA PANTHER:PTHR23350 Pfam:PF04757 RefSeq:XP_640208.2
ProteinModelPortal:Q54S31 EnsemblProtists:DDB0238052 GeneID:8623748
KEGG:ddi:DDB_G0282693 ProtClustDB:CLSZ2430477 Uniprot:Q54S31
Length = 374
Score = 109 (43.4 bits), Expect = 0.00038, P = 0.00038
Identities = 23/70 (32%), Positives = 29/70 (41%)
Query: 48 DAKIENLEIGSFDRMRGDSQVGSADLEREDECGICLEPCTKMVLPNCCHAMCIKCYRNWN 107
D KIE ++ S Q + + E E +C +CLE T C H C C W
Sbjct: 293 DIKIE--QVDSVINNNNQDQNNNQEEEEEQKCTLCLEVRTHTTATICGHLFCWHCITEWC 350
Query: 108 TKSESCPFCR 117
E CP CR
Sbjct: 351 NNKEQCPVCR 360
>TAIR|locus:2061698 [details] [associations]
symbol:AT2G20030 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0010043
"response to zinc ion" evidence=RCA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540 EMBL:AC006081
IPI:IPI00548965 PIR:B84584 RefSeq:NP_179593.1 UniGene:At.52839
ProteinModelPortal:Q9SL78 SMR:Q9SL78 PaxDb:Q9SL78 PRIDE:Q9SL78
EnsemblPlants:AT2G20030.1 GeneID:816522 KEGG:ath:AT2G20030
TAIR:At2g20030 HOGENOM:HOG000034165 InParanoid:Q9SL78 OMA:REGNENI
PhylomeDB:Q9SL78 ProtClustDB:CLSN2683296 Genevestigator:Q9SL78
GermOnline:AT2G20030 Uniprot:Q9SL78
Length = 390
Score = 109 (43.4 bits), Expect = 0.00041, P = 0.00041
Identities = 39/122 (31%), Positives = 56/122 (45%)
Query: 41 SNLRELDDAKIENLEIGSFDRMRGDSQVGSADLEREDECGICLEPCTKM----VLPNCCH 96
S LD IE+L F ++G L++ EC +CL + +LP C H
Sbjct: 94 SRFSGLDKKAIESLPFFRFSALKG--------LKQGLECSVCLSKFEDVEILRLLPKCRH 145
Query: 97 AMCIKCYRNWNTKSESCPFCRGSMKRVNSED-LWVL--TCTDDVIDPETVSKEDLLRFYL 153
A I C W + +CP CR RVN ED L VL + T I ++ ++E+ R +
Sbjct: 146 AFHIGCIDQWLEQHATCPLCRN---RVNIEDDLSVLGNSSTSLRILNQSETREEDSRLEI 202
Query: 154 YI 155
YI
Sbjct: 203 YI 204
>WB|WBGene00017342 [details] [associations]
symbol:F10D7.5 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 GO:GO:0009792 GO:GO:0046872
GO:GO:0008270 GO:GO:0000003 Gene3D:3.30.40.10 InterPro:IPR013083
KO:K01931 InterPro:IPR006573 Pfam:PF07177 SMART:SM00588
PROSITE:PS51065 GeneTree:ENSGT00530000063117 OMA:AIPCGPR
EMBL:FO080923 UniGene:Cel.7840 GeneID:181767 KEGG:cel:CELE_F10D7.5
UCSC:F10D7.5a CTD:181767 NextBio:915254 HOGENOM:HOG000144540
RefSeq:NP_510818.3 ProteinModelPortal:Q7JP67 SMR:Q7JP67
PRIDE:Q7JP67 EnsemblMetazoa:F10D7.5a WormBase:F10D7.5a
InParanoid:Q7JP67 ArrayExpress:Q7JP67 Uniprot:Q7JP67
Length = 617
Score = 111 (44.1 bits), Expect = 0.00043, P = 0.00043
Identities = 24/67 (35%), Positives = 34/67 (50%)
Query: 58 SFDRMRGDSQVGSADLEREDECGICLEPCTKMVLPNCCH-AMCIKCYRNWNTKSESCPFC 116
SF R G+ G+ ++ DEC IC++ VL C H MC +C R T +CP C
Sbjct: 548 SFQRNEGN---GAQEVNEGDECTICMDAPVNSVLYTCGHMCMCFECGRRLLTTKGTCPIC 604
Query: 117 RGSMKRV 123
R ++ V
Sbjct: 605 RAPVQDV 611
>TAIR|locus:2199902 [details] [associations]
symbol:AT1G23980 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC002423
HOGENOM:HOG000239562 EMBL:AK119101 EMBL:BT010323 IPI:IPI00526690
RefSeq:NP_173809.1 UniGene:At.41503 UniGene:At.65734
ProteinModelPortal:Q8GW38 SMR:Q8GW38 EnsemblPlants:AT1G23980.1
GeneID:839010 KEGG:ath:AT1G23980 TAIR:At1g23980 eggNOG:NOG265447
InParanoid:Q8GW38 OMA:MEGKRIC PhylomeDB:Q8GW38
ProtClustDB:CLSN2914164 Genevestigator:Q8GW38 GermOnline:AT1G23980
Uniprot:Q8GW38
Length = 369
Score = 108 (43.1 bits), Expect = 0.00049, P = 0.00049
Identities = 28/90 (31%), Positives = 43/90 (47%)
Query: 36 LQRL-HSNLRELDDAKIENLEIGSFDRMRGDSQVGSADLEREDECGICL----EPCTKMV 90
LQ+L H + LD A I+ L + + ++G + +C +CL E +
Sbjct: 108 LQQLFHLHDSGLDQALIDALPVFLYKEIKGTKE--------PFDCAVCLCEFSEDDKLRL 159
Query: 91 LPNCCHAMCIKCYRNWNTKSESCPFCRGSM 120
LPNC HA I C W + +CP CRG++
Sbjct: 160 LPNCSHAFHIDCIDTWLLSNSTCPLCRGTL 189
>TAIR|locus:2144088 [details] [associations]
symbol:AT5G06490 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
EMBL:AP002543 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000237642 IPI:IPI00540295 RefSeq:NP_196267.1
UniGene:At.65493 ProteinModelPortal:Q9FG21 SMR:Q9FG21
EnsemblPlants:AT5G06490.1 GeneID:830537 KEGG:ath:AT5G06490
TAIR:At5g06490 eggNOG:NOG316846 InParanoid:Q9FG21 OMA:CTRSHIS
PhylomeDB:Q9FG21 ProtClustDB:CLSN2916514 Genevestigator:Q9FG21
GermOnline:AT5G06490 Uniprot:Q9FG21
Length = 197
Score = 103 (41.3 bits), Expect = 0.00054, P = 0.00054
Identities = 38/126 (30%), Positives = 52/126 (41%)
Query: 7 HVSADDRPSLTSPGRKATIREFYGVILPSLQRLHSNLRELDDAKIENLE-----IGSFDR 61
H+SA P+ T+P + RE G + P +R E D +E L I F +
Sbjct: 51 HISAS--PT-TTPRTRRRQRESNGTLPPGQERFDFEDDESDTVVVEVLGLTEEVIKGFPK 107
Query: 62 MRGDSQVGSADLEREDE----CGICLEPCTKM----VLPNCCHAMCIKCYRNWNTKSESC 113
+ + S L++E C ICL KM VLP+C H C W +C
Sbjct: 108 LPYEEARVSYSLQKESSTTSCCSICLADYKKMDMIRVLPDCNHLFHDNCVDPWLRLHPTC 167
Query: 114 PFCRGS 119
P CR S
Sbjct: 168 PVCRTS 173
>UNIPROTKB|J3KS72 [details] [associations]
symbol:TRIM37 "E3 ubiquitin-protein ligase TRIM37"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC099850 EMBL:AC100832 HGNC:HGNC:7523 ChiTaRS:TRIM37
EMBL:AC005207 EMBL:AC036154 ProteinModelPortal:J3KS72
Ensembl:ENST00000577554 Uniprot:J3KS72
Length = 67
Score = 88 (36.0 bits), Expect = 0.00058, P = 0.00058
Identities = 18/46 (39%), Positives = 23/46 (50%)
Query: 79 CGICLEPCTKMVL-PNCCHAMCIKCYRNWNTKSES-CPFCRGSMKR 122
C IC+E L P+C C C R W T+ + CP CR S+ R
Sbjct: 15 CFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRVSLCR 60
>ZFIN|ZDB-GENE-020213-1 [details] [associations]
symbol:mkrn1 "makorin, ring finger protein, 1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000571
PROSITE:PS50089 PROSITE:PS50103 SMART:SM00184 SMART:SM00356
UniPathway:UPA00143 Prosite:PS00518 ZFIN:ZDB-GENE-020213-1
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0003676
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5084
InterPro:IPR017907 HSSP:P47974 InterPro:IPR026290 PANTHER:PTHR11224
HOGENOM:HOG000252976 KO:K15687 EMBL:CR792454 EMBL:CT826375
EMBL:BC095243 EMBL:AF277173 IPI:IPI00639757 RefSeq:NP_694510.1
UniGene:Dr.78561 ProteinModelPortal:Q4VBT5 STRING:Q4VBT5
Ensembl:ENSDART00000061070 GeneID:170782 KEGG:dre:170782 CTD:23608
GeneTree:ENSGT00390000014093 HOVERGEN:HBG066965 InParanoid:Q4VBT5
OMA:YQRGCCA OrthoDB:EOG45DWPM NextBio:20797100 Bgee:Q4VBT5
Uniprot:Q4VBT5
Length = 439
Score = 108 (43.1 bits), Expect = 0.00065, P = 0.00065
Identities = 26/83 (31%), Positives = 38/83 (45%)
Query: 65 DSQVGSADLEREDE-CGICLE-------PCTKM--VLPNCCHAMCIKCYRNWNTKSE--- 111
D ++ A +D CG+C+E P + +L NCCH C+KC R W + +
Sbjct: 221 DMEISFAIQRSKDMMCGVCMEVVFEKTNPSERRFGILSNCCHCYCLKCIRKWRSAKQFES 280
Query: 112 ----SCPFCRGSMKRVNSEDLWV 130
SCP CR + V + WV
Sbjct: 281 KIIKSCPECRITSNFVIPSEYWV 303
>TAIR|locus:2172550 [details] [associations]
symbol:AT5G57750 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:NOG302028 EMBL:AB018118
IPI:IPI00528139 RefSeq:NP_200583.1 UniGene:At.55607
ProteinModelPortal:Q9FHG8 SMR:Q9FHG8 EnsemblPlants:AT5G57750.1
GeneID:835883 KEGG:ath:AT5G57750 TAIR:At5g57750
HOGENOM:HOG000199755 InParanoid:Q9FHG8 PhylomeDB:Q9FHG8
Genevestigator:Q9FHG8 Uniprot:Q9FHG8
Length = 210
Score = 103 (41.3 bits), Expect = 0.00066, P = 0.00066
Identities = 25/91 (27%), Positives = 42/91 (46%)
Query: 35 SLQRLHSNLRELDDAKIENLEIGSFDRMRGDSQVGSA-DLEREDECGICLEPCTK----M 89
+LQ + L DA+I+ I + + + +G DL +C +CL T
Sbjct: 80 ALQGRYQTRFNLHDAEIDQSFIDALPLLHYKTMIGLRHDLS---DCAVCLREFTAEDELR 136
Query: 90 VLPNCCHAMCIKCYRNWNTKSESCPFCRGSM 120
+LP C HA ++C W + +CP CR ++
Sbjct: 137 LLPKCSHAFHVECIDTWLLTNSTCPLCRDNL 167
>DICTYBASE|DDB_G0279263 [details] [associations]
symbol:DDB_G0279263 "E3 ubiquitin-protein ligase
CHFR" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000253
InterPro:IPR008984 Pfam:PF00498 PROSITE:PS50006 PROSITE:PS50089
SMART:SM00184 SMART:SM00240 dictyBase:DDB_G0279263 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AAFI02000030
InterPro:IPR017907 eggNOG:NOG253207 RefSeq:XP_641760.1
ProteinModelPortal:Q54X17 EnsemblProtists:DDB0205685 GeneID:8621958
KEGG:ddi:DDB_G0279263 InParanoid:Q54X17 OMA:HICEQTK Uniprot:Q54X17
Length = 742
Score = 110 (43.8 bits), Expect = 0.00072, P = 0.00072
Identities = 26/77 (33%), Positives = 36/77 (46%)
Query: 79 CGICLEPCTK-MVLPNCCHAMCIKCYRNWNTKSESCPFCRGSMKRV-------NSEDLWV 130
CGIC + K + L C H C+ CY +W S CP CR S+K N +L++
Sbjct: 404 CGICQDIIYKCLTLIPCMHNFCVCCYGDWRANSMDCPQCRQSVKSAQKNHAINNLIELYL 463
Query: 131 LTCTDDVIDPETVSKED 147
+ V DPE + D
Sbjct: 464 KKNPEKVRDPEELESMD 480
>UNIPROTKB|F1NHH0 [details] [associations]
symbol:RNF185 "E3 ubiquitin-protein ligase RNF185"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00390000014107
EMBL:AADN02043215 EMBL:AADN02043216 IPI:IPI00590225
Ensembl:ENSGALT00000011275 ArrayExpress:F1NHH0 Uniprot:F1NHH0
Length = 117
Score = 86 (35.3 bits), Expect = 0.00099, P = 0.00099
Identities = 16/48 (33%), Positives = 22/48 (45%)
Query: 78 ECGICLEPCTKMVLPNCCHAMCIKCYRNW-NTKS--ESCPFCRGSMKR 122
EC ICL+ V+ C H C C W T+ + CP C+ + R
Sbjct: 3 ECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISR 50
>UNIPROTKB|F8W6K1 [details] [associations]
symbol:SCAF11 "Protein SCAF11" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC000015 HGNC:HGNC:10784 ChiTaRS:SCAF11
EMBL:AC084878 IPI:IPI00852713 ProteinModelPortal:F8W6K1 SMR:F8W6K1
Ensembl:ENST00000266589 ArrayExpress:F8W6K1 Bgee:F8W6K1
Uniprot:F8W6K1
Length = 118
Score = 86 (35.3 bits), Expect = 0.00099, P = 0.00099
Identities = 28/83 (33%), Positives = 37/83 (44%)
Query: 46 LDDAKIENLEIGSFDRMRGDSQVGSADLERE-DECGICLEPCT--KMV-LPNCC-HAMCI 100
+ D K E++E G + GD+ + + L E D C ICL C K V P C H C+
Sbjct: 27 MGDKKYEDME-GEEN---GDNTISTGLLYSEADRCPICLN-CLLEKEVGFPESCNHVFCM 81
Query: 101 KCYRNWNTKSESCPFCRGSMKRV 123
C W SCP R + V
Sbjct: 82 TCILKWAETLASCPIDRKPFQAV 104
>UNIPROTKB|J3QSA0 [details] [associations]
symbol:TRIM37 "E3 ubiquitin-protein ligase TRIM37"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC099850 EMBL:AC100832 HGNC:HGNC:7523 ChiTaRS:TRIM37
EMBL:AC005207 EMBL:AC036154 ProteinModelPortal:J3QSA0
Ensembl:ENST00000580973 Uniprot:J3QSA0
Length = 58
Score = 86 (35.3 bits), Expect = 0.00099, P = 0.00099
Identities = 17/44 (38%), Positives = 21/44 (47%)
Query: 79 CGICLEPCTKMVL-PNCCHAMCIKCYRNWNTKSES-CPFCRGSM 120
C IC+E L P+C C C R W T+ + CP CR M
Sbjct: 15 CFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRKGM 58
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.139 0.443 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 175 175 0.00078 109 3 11 22 0.38 32
31 0.49 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 51
No. of states in DFA: 606 (64 KB)
Total size of DFA: 180 KB (2104 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.06u 0.09s 17.15t Elapsed: 00:00:01
Total cpu time: 17.06u 0.09s 17.15t Elapsed: 00:00:01
Start: Sat May 11 05:32:47 2013 End: Sat May 11 05:32:48 2013