Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>030553
MADNPTEGILEQLRLGVAKFELVSSPVASISNPNSQTFPTAFHRDSNNLFFARIGPPLGG
GSPAMKKVERYSVQRVTGDGRCLFRALVKGMALNKGITLNSRDEREDAAFPLFFTNADDL
RMAVKEVICDSGSERRQYEEALIAITIDESLKRYCQRIGRSDFWGGESELLVSTC

High Scoring Gene Products

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  030553
        (175 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:504955906 - symbol:AT2G38025 "AT2G38025" speci...   495  2.6e-47   1
TAIR|locus:2095748 - symbol:AT3G57810 "AT3G57810" species...   107  0.00050   1


>TAIR|locus:504955906 [details] [associations]
            symbol:AT2G38025 "AT2G38025" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] Pfam:PF02338 EMBL:CP002685 GenomeReviews:CT485783_GR
            InterPro:IPR003323 PROSITE:PS50802 EMBL:BT005253 EMBL:JQ013444
            EMBL:AK117356 IPI:IPI00520796 RefSeq:NP_850290.1 UniGene:At.45690
            EnsemblPlants:AT2G38025.1 GeneID:818381 KEGG:ath:AT2G38025
            TAIR:At2g38025 eggNOG:NOG309914 HOGENOM:HOG000070949
            InParanoid:Q8GYW0 OMA:KRYCQRI ProtClustDB:CLSN2722081
            Genevestigator:Q8GYW0 Uniprot:Q8GYW0
        Length = 234

 Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
 Identities = 107/176 (60%), Positives = 129/176 (73%)

Query:     1 MADNPTEGILEQLRLGVAKFELVSSPVASISNPNSQT-FPTAF---HRDSNNLFFARIGP 56
             +  +    ILEQLR G A+FELVSSP AS+S+  S T  P +F    + ++ +FFARI  
Sbjct:     3 LKSSSNNNILEQLRNGFARFELVSSPTASVSDSISSTSLPASFISTTKGNSYVFFARINS 62

Query:    57 PLGGGSPAMKKVERYSVQRVTGDGRCLFRALVKGMALNKGITLNSRDEREDAAFPLFFTN 116
              +   SPA KKVE+Y+V RV GDGRCLFRALVKGMA NKGITLN + ER+DA        
Sbjct:    63 SMNR-SPAAKKVEKYAVDRVKGDGRCLFRALVKGMAFNKGITLNPQRERDDA-------- 113

Query:   117 ADDLRMAVKEVICDSGSERRQYEEALIAITIDESLKRYCQRIGRSDFWGGESELLV 172
              D+LRMAVKEVIC+   ER +Y+EAL+AIT+DESLKR+CQRIGR DFWGGESELLV
Sbjct:   114 -DELRMAVKEVICNDPKEREKYKEALVAITVDESLKRFCQRIGRHDFWGGESELLV 168


>TAIR|locus:2095748 [details] [associations]
            symbol:AT3G57810 "AT3G57810" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008234
            "cysteine-type peptidase activity" evidence=ISS] [GO:0009507
            "chloroplast" evidence=IDA] Pfam:PF02338 GO:GO:0009507
            EMBL:CP002686 GenomeReviews:BA000014_GR InterPro:IPR003323
            PROSITE:PS50802 EMBL:AL132977 EMBL:AY086909 EMBL:AK175291
            EMBL:AK175225 EMBL:AK176705 EMBL:BT026114 IPI:IPI00532222
            IPI:IPI00534320 PIR:T46003 RefSeq:NP_001078307.1 RefSeq:NP_567058.2
            RefSeq:NP_850716.1 UniGene:At.34796 ProteinModelPortal:Q8LBZ4
            SMR:Q8LBZ4 PaxDb:Q8LBZ4 PRIDE:Q8LBZ4 EnsemblPlants:AT3G57810.2
            EnsemblPlants:AT3G57810.3 GeneID:824950 KEGG:ath:AT3G57810
            TAIR:At3g57810 eggNOG:NOG324883 HOGENOM:HOG000006267
            InParanoid:Q682S6 OMA:ICYSPIT PhylomeDB:Q8LBZ4
            ProtClustDB:CLSN2680442 Genevestigator:Q8LBZ4 Uniprot:Q8LBZ4
        Length = 317

 Score = 107 (42.7 bits), Expect = 0.00050, P = 0.00050
 Identities = 45/155 (29%), Positives = 67/155 (43%)

Query:    22 LVSSPVASISNPNSQTFPTAFHRDSNNLFFARIGPPLGGGSPAMKKVER-YSVQRVTGDG 80
             +VS  V   S   S    ++  +D+NN+           G    K+V   YS+  + GDG
Sbjct:   122 IVSLLVCYSSTSQSAYADSSRDKDANNVHHHSSDGKFHNG----KRVYTDYSIIGIPGDG 177

Query:    81 RCLFRALVKGMALNKG-ITLNSRDEREDAAFPLFFTNADDLRMAVKEVICDSGSERRQYE 139
             RCLFR++  G  L  G +    + +RE          AD+LR  V     D   +RRQ  
Sbjct:   178 RCLFRSVAHGFCLRSGKLAPGEKMQRE---------LADELRTRV----ADEFIQRRQET 224

Query:   140 EALIAITIDESLKRYCQRIGRSDFWGGESELLVST 174
             E  +    D     Y ++I     WGGE EL +++
Sbjct:   225 EWFVEGDFDT----YVRQIRDPHVWGGEPELFMAS 255


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.136   0.396    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      175       175   0.00078  109 3  11 22  0.40    32
                                                     31  0.49    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  593 (63 KB)
  Total size of DFA:  141 KB (2086 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.46u 0.16s 15.62t   Elapsed:  00:00:01
  Total cpu time:  15.46u 0.16s 15.62t   Elapsed:  00:00:01
  Start:  Sat May 11 05:37:47 2013   End:  Sat May 11 05:37:48 2013

Back to top