Query 030554
Match_columns 175
No_of_seqs 119 out of 1345
Neff 10.3
Searched_HMMs 46136
Date Fri Mar 29 15:30:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030554.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/030554hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR01262 maiA maleylacetoacet 100.0 2.5E-33 5.4E-38 199.8 18.6 170 3-173 39-210 (210)
2 PRK09481 sspA stringent starva 100.0 2.8E-33 6E-38 199.7 14.4 162 2-173 45-208 (211)
3 KOG0868 Glutathione S-transfer 100.0 3.3E-32 7.2E-37 180.9 15.7 169 4-174 46-214 (217)
4 PRK10542 glutathionine S-trans 100.0 3.1E-31 6.8E-36 187.8 14.3 158 3-168 39-198 (201)
5 PRK13972 GSH-dependent disulfi 100.0 4.3E-31 9.4E-36 188.9 13.1 161 3-168 39-206 (215)
6 PRK15113 glutathione S-transfe 100.0 7.1E-31 1.5E-35 187.7 13.4 163 3-170 46-211 (214)
7 PLN02473 glutathione S-transfe 100.0 2.3E-30 5.1E-35 185.0 15.8 164 2-167 40-211 (214)
8 PLN02395 glutathione S-transfe 100.0 3.3E-30 7.2E-35 184.3 16.2 165 2-168 39-211 (215)
9 COG0625 Gst Glutathione S-tran 100.0 2.9E-29 6.3E-34 179.0 16.1 158 2-162 37-199 (211)
10 PRK10357 putative glutathione 100.0 1.1E-28 2.4E-33 174.9 16.3 163 3-168 36-201 (202)
11 PRK11752 putative S-transferas 100.0 1.2E-28 2.7E-33 180.9 16.8 161 3-168 88-259 (264)
12 PTZ00057 glutathione s-transfe 100.0 3.1E-28 6.8E-33 172.9 14.7 152 9-171 52-203 (205)
13 KOG0406 Glutathione S-transfer 100.0 5.4E-28 1.2E-32 169.9 15.2 159 3-168 45-212 (231)
14 PLN02378 glutathione S-transfe 100.0 1E-27 2.2E-32 171.2 13.0 149 3-168 47-200 (213)
15 TIGR00862 O-ClC intracellular 99.9 8.8E-27 1.9E-31 167.2 15.1 152 3-168 46-221 (236)
16 KOG0867 Glutathione S-transfer 99.9 1.2E-26 2.5E-31 166.6 13.3 163 2-166 40-208 (226)
17 PLN02817 glutathione dehydroge 99.9 1E-25 2.3E-30 164.9 14.6 147 3-167 100-251 (265)
18 KOG1695 Glutathione S-transfer 99.9 5.4E-25 1.2E-29 153.7 14.2 160 7-171 43-204 (206)
19 PRK10387 glutaredoxin 2; Provi 99.9 1.1E-23 2.4E-28 150.1 10.7 147 8-162 40-208 (210)
20 PLN02907 glutamate-tRNA ligase 99.9 3.7E-21 7.9E-26 156.6 14.1 134 9-168 31-173 (722)
21 TIGR02182 GRXB Glutaredoxin, G 99.9 2E-21 4.3E-26 138.4 10.3 146 7-161 38-206 (209)
22 KOG4420 Uncharacterized conser 99.9 1.5E-20 3.3E-25 132.4 13.1 166 2-168 64-288 (325)
23 cd03191 GST_C_Zeta GST_C famil 99.8 4.7E-18 1E-22 111.0 12.9 117 51-168 2-120 (121)
24 KOG1422 Intracellular Cl- chan 99.7 9E-17 2E-21 110.3 11.1 154 2-168 47-206 (221)
25 cd03188 GST_C_Beta GST_C famil 99.7 4.8E-17 1E-21 104.9 9.2 111 52-165 2-114 (114)
26 cd03196 GST_C_5 GST_C family, 99.7 1.5E-16 3.2E-21 102.9 10.2 111 49-165 3-115 (115)
27 cd03186 GST_C_SspA GST_N famil 99.7 2.6E-16 5.6E-21 100.5 11.1 105 51-165 2-107 (107)
28 cd03178 GST_C_Ure2p_like GST_C 99.7 1.6E-16 3.4E-21 102.5 10.0 110 52-165 1-112 (113)
29 cd03208 GST_C_Alpha GST_C fami 99.7 4.4E-16 9.4E-21 103.7 10.8 116 52-170 3-118 (137)
30 cd03189 GST_C_GTT1_like GST_C 99.7 6.6E-16 1.4E-20 100.5 11.4 110 47-159 2-119 (119)
31 cd03177 GST_C_Delta_Epsilon GS 99.7 2.3E-16 4.9E-21 102.6 8.4 112 52-168 2-113 (118)
32 cd03181 GST_C_EFB1gamma GST_C 99.7 7.8E-16 1.7E-20 100.6 11.0 115 52-169 1-118 (123)
33 cd03184 GST_C_Omega GST_C fami 99.7 4.9E-16 1.1E-20 101.9 9.7 107 52-168 2-114 (124)
34 cd03210 GST_C_Pi GST_C family, 99.7 1E-15 2.2E-20 100.6 10.4 111 52-169 3-114 (126)
35 cd03180 GST_C_2 GST_C family, 99.7 2E-15 4.4E-20 96.7 11.3 107 52-161 2-110 (110)
36 cd03187 GST_C_Phi GST_C family 99.7 1.3E-15 2.9E-20 98.8 10.3 112 52-165 2-118 (118)
37 cd03182 GST_C_GTT2_like GST_C 99.7 1.7E-15 3.7E-20 98.2 10.6 110 49-161 1-117 (117)
38 cd03185 GST_C_Tau GST_C family 99.7 1.6E-15 3.5E-20 99.6 10.3 110 51-169 2-117 (126)
39 cd03195 GST_C_4 GST_C family, 99.6 1.5E-15 3.3E-20 98.0 8.8 111 50-166 1-112 (114)
40 cd03209 GST_C_Mu GST_C family, 99.6 3.1E-15 6.8E-20 97.6 10.3 110 52-169 2-111 (121)
41 cd03190 GST_C_ECM4_like GST_C 99.6 5.5E-15 1.2E-19 99.1 10.7 109 51-167 3-118 (142)
42 cd03183 GST_C_Theta GST_C fami 99.6 6.5E-15 1.4E-19 96.8 10.4 111 53-165 2-120 (126)
43 cd03198 GST_C_CLIC GST_C famil 99.6 1.5E-14 3.3E-19 95.0 10.6 83 86-168 24-125 (134)
44 cd03203 GST_C_Lambda GST_C fam 99.6 2.3E-14 5.1E-19 93.4 10.7 106 49-168 1-112 (120)
45 PF00043 GST_C: Glutathione S- 99.6 2.8E-14 6E-19 89.1 8.9 71 86-159 23-95 (95)
46 cd03207 GST_C_8 GST_C family, 99.6 1.9E-14 4.1E-19 91.2 7.3 76 88-167 27-102 (103)
47 cd03206 GST_C_7 GST_C family, 99.5 5.3E-14 1.2E-18 88.7 8.6 71 88-161 30-100 (100)
48 cd03200 GST_C_JTV1 GST_C famil 99.5 4.7E-14 1E-18 88.2 8.2 96 33-158 1-96 (96)
49 KOG3027 Mitochondrial outer me 99.5 2.2E-13 4.7E-18 93.4 11.5 144 10-158 62-248 (257)
50 cd03194 GST_C_3 GST_C family, 99.5 7.4E-14 1.6E-18 90.2 8.4 75 88-166 38-113 (114)
51 COG0435 ECM4 Predicted glutath 99.5 2.8E-14 6.2E-19 101.9 6.7 144 13-166 127-285 (324)
52 cd03179 GST_C_1 GST_C family, 99.5 5.6E-14 1.2E-18 89.2 7.0 102 52-156 2-105 (105)
53 KOG4244 Failed axon connection 99.5 2.6E-13 5.6E-18 96.6 10.5 149 6-158 84-273 (281)
54 PF14497 GST_C_3: Glutathione 99.5 5.7E-14 1.2E-18 88.4 6.2 69 86-157 30-99 (99)
55 cd03204 GST_C_GDAP1 GST_C fami 99.5 2.2E-13 4.8E-18 86.9 8.7 76 85-161 23-111 (111)
56 cd03201 GST_C_DHAR GST_C famil 99.5 2.1E-13 4.5E-18 88.9 8.2 78 90-168 29-111 (121)
57 KOG2903 Predicted glutathione 99.5 1E-13 2.2E-18 98.2 5.2 146 13-166 121-287 (319)
58 PF13410 GST_C_2: Glutathione 99.4 1.1E-12 2.4E-17 77.0 8.3 65 87-154 2-69 (69)
59 cd03192 GST_C_Sigma_like GST_C 99.4 1.8E-12 3.9E-17 82.2 8.5 101 52-155 2-104 (104)
60 cd00299 GST_C_family Glutathio 99.4 1.4E-12 3.1E-17 81.6 6.9 96 57-155 2-100 (100)
61 PF14834 GST_C_4: Glutathione 99.3 2.9E-11 6.2E-16 75.9 9.9 113 49-166 1-113 (117)
62 cd03202 GST_C_etherase_LigE GS 99.3 1.5E-11 3.2E-16 80.5 7.9 68 89-158 56-124 (124)
63 cd03197 GST_C_mPGES2 GST_C fam 99.2 3.8E-11 8.1E-16 79.9 7.4 66 90-157 78-145 (149)
64 cd03061 GST_N_CLIC GST_N famil 99.2 1.2E-11 2.6E-16 75.9 4.5 41 2-42 48-88 (91)
65 cd03193 GST_C_Metaxin GST_C fa 99.2 7.7E-11 1.7E-15 72.5 8.0 66 89-156 17-88 (88)
66 COG2999 GrxB Glutaredoxin 2 [P 99.2 1.2E-10 2.5E-15 78.4 9.3 144 11-162 43-208 (215)
67 KOG3028 Translocase of outer m 99.2 1.2E-09 2.5E-14 79.9 13.9 145 10-157 44-233 (313)
68 cd03052 GST_N_GDAP1 GST_N fami 99.2 1.8E-11 3.9E-16 72.6 3.0 35 3-37 39-73 (73)
69 PF13417 GST_N_3: Glutathione 99.2 3.9E-11 8.5E-16 71.6 4.4 41 3-43 34-74 (75)
70 cd03057 GST_N_Beta GST_N famil 99.2 3.4E-11 7.4E-16 72.2 4.0 40 2-41 37-77 (77)
71 cd03205 GST_C_6 GST_C family, 99.1 5.7E-10 1.2E-14 70.0 8.7 66 85-155 31-98 (98)
72 cd03211 GST_C_Metaxin2 GST_C f 99.1 1.3E-10 2.9E-15 76.2 6.1 69 86-156 52-126 (126)
73 cd03046 GST_N_GTT1_like GST_N 99.1 5.5E-11 1.2E-15 71.0 3.9 39 3-41 38-76 (76)
74 KOG3029 Glutathione S-transfer 99.1 2.8E-10 6.1E-15 81.9 7.9 147 9-157 130-354 (370)
75 cd03048 GST_N_Ure2p_like GST_N 99.1 6.3E-11 1.4E-15 71.7 3.9 39 3-41 39-80 (81)
76 cd03050 GST_N_Theta GST_N fami 99.1 1.1E-10 2.5E-15 69.7 3.7 37 4-40 40-76 (76)
77 cd03059 GST_N_SspA GST_N famil 99.1 1.5E-10 3.2E-15 68.6 3.8 38 3-40 36-73 (73)
78 PF13409 GST_N_2: Glutathione 99.0 2E-10 4.4E-15 67.5 3.7 37 3-39 33-70 (70)
79 PF02798 GST_N: Glutathione S- 99.0 1.8E-10 3.8E-15 68.9 3.4 36 3-38 39-76 (76)
80 cd03212 GST_C_Metaxin1_3 GST_C 99.0 1E-09 2.2E-14 73.0 7.2 69 87-157 60-134 (137)
81 cd03044 GST_N_EF1Bgamma GST_N 99.0 2.4E-10 5.2E-15 68.1 3.5 37 2-38 37-74 (75)
82 cd03053 GST_N_Phi GST_N family 99.0 2.4E-10 5.1E-15 68.3 3.3 37 3-39 40-76 (76)
83 cd03058 GST_N_Tau GST_N family 99.0 3E-10 6.5E-15 67.5 3.7 38 3-40 36-74 (74)
84 cd03047 GST_N_2 GST_N family, 99.0 2.2E-10 4.8E-15 67.9 2.9 35 3-37 39-73 (73)
85 cd03045 GST_N_Delta_Epsilon GS 99.0 2.9E-10 6.4E-15 67.5 3.1 36 3-38 39-74 (74)
86 cd03076 GST_N_Pi GST_N family, 99.0 3.2E-10 6.9E-15 67.2 2.7 35 4-38 38-72 (73)
87 cd03043 GST_N_1 GST_N family, 98.9 6E-10 1.3E-14 66.0 2.8 35 3-37 39-73 (73)
88 cd03056 GST_N_4 GST_N family, 98.9 7.1E-10 1.5E-14 65.6 3.0 35 3-37 39-73 (73)
89 cd03042 GST_N_Zeta GST_N famil 98.9 9.9E-10 2.2E-14 64.9 3.1 35 3-37 39-73 (73)
90 cd03041 GST_N_2GST_N GST_N fam 98.9 9.1E-10 2E-14 66.0 2.9 37 4-40 39-77 (77)
91 cd03075 GST_N_Mu GST_N family, 98.9 1.1E-09 2.5E-14 66.3 3.1 29 12-40 54-82 (82)
92 cd03039 GST_N_Sigma_like GST_N 98.9 1E-09 2.2E-14 64.8 2.3 34 5-38 39-72 (72)
93 cd03038 GST_N_etherase_LigE GS 98.9 2.2E-09 4.8E-14 65.4 3.5 33 9-41 51-84 (84)
94 cd03049 GST_N_3 GST_N family, 98.8 2.2E-09 4.8E-14 63.5 3.0 35 3-37 38-73 (73)
95 cd03060 GST_N_Omega_like GST_N 98.8 2.6E-09 5.6E-14 62.9 3.2 34 3-36 36-70 (71)
96 cd03080 GST_N_Metaxin_like GST 98.8 3.3E-09 7.2E-14 63.2 3.5 34 8-41 42-75 (75)
97 cd03051 GST_N_GTT2_like GST_N 98.8 4.5E-09 9.9E-14 62.1 3.0 35 3-37 39-74 (74)
98 cd03077 GST_N_Alpha GST_N fami 98.8 5.9E-09 1.3E-13 62.7 3.5 30 12-41 48-77 (79)
99 cd03055 GST_N_Omega GST_N fami 98.7 1.6E-08 3.4E-13 62.3 2.8 35 3-37 54-89 (89)
100 cd03079 GST_N_Metaxin2 GST_N f 98.6 2.8E-08 6E-13 58.6 2.8 31 9-39 44-74 (74)
101 cd03037 GST_N_GRX2 GST_N famil 98.5 1E-07 2.3E-12 55.9 2.6 33 6-38 38-71 (71)
102 cd03040 GST_N_mPGES2 GST_N fam 98.4 2.3E-07 5.1E-12 55.3 3.4 33 8-40 40-76 (77)
103 cd03054 GST_N_Metaxin GST_N fa 98.4 2E-07 4.2E-12 54.9 2.9 31 9-39 42-72 (72)
104 cd00570 GST_N_family Glutathio 98.3 4.4E-07 9.5E-12 52.5 2.7 32 6-37 40-71 (71)
105 PF04399 Glutaredoxin2_C: Glut 98.3 7.1E-06 1.5E-10 53.8 8.6 68 90-162 58-125 (132)
106 cd03199 GST_C_GRX2 GST_C famil 98.2 8.2E-06 1.8E-10 53.1 6.2 66 91-161 60-125 (128)
107 cd03078 GST_N_Metaxin1_like GS 97.9 9.8E-06 2.1E-10 47.8 3.1 31 9-39 42-72 (73)
108 KOG1147 Glutamyl-tRNA syntheta 97.6 4.6E-05 1E-09 60.2 2.6 117 21-165 43-162 (712)
109 PF10568 Tom37: Outer mitochon 96.8 0.0016 3.4E-08 38.2 2.8 29 9-37 43-72 (72)
110 TIGR02190 GlrX-dom Glutaredoxi 95.5 0.013 2.7E-07 34.9 2.3 32 6-37 48-79 (79)
111 PF11801 Tom37_C: Tom37 C-term 93.8 0.35 7.6E-06 33.3 6.5 39 96-134 113-153 (168)
112 cd03029 GRX_hybridPRX5 Glutare 93.2 0.1 2.2E-06 30.3 2.6 31 7-37 42-72 (72)
113 PRK10638 glutaredoxin 3; Provi 92.6 0.13 2.9E-06 30.7 2.6 34 5-38 42-75 (83)
114 TIGR02196 GlrX_YruB Glutaredox 91.7 0.2 4.2E-06 28.6 2.6 31 6-36 41-73 (74)
115 cd02066 GRX_family Glutaredoxi 90.0 0.31 6.7E-06 27.5 2.3 31 5-35 40-70 (72)
116 PF11287 DUF3088: Protein of u 89.7 0.49 1.1E-05 30.1 3.0 28 14-41 67-108 (112)
117 PF09635 MetRS-N: MetRS-N bind 88.9 2.5 5.4E-05 27.4 5.9 34 8-41 28-63 (122)
118 cd02976 NrdH NrdH-redoxin (Nrd 88.6 0.29 6.3E-06 27.8 1.5 23 5-27 40-62 (73)
119 TIGR02183 GRXA Glutaredoxin, G 84.7 1.4 3.1E-05 26.5 3.1 28 14-41 56-83 (86)
120 TIGR02200 GlrX_actino Glutared 82.2 1.4 3E-05 25.4 2.2 31 6-36 41-75 (77)
121 cd03027 GRX_DEP Glutaredoxin ( 81.5 1.6 3.5E-05 25.2 2.4 30 5-34 41-70 (73)
122 PRK11200 grxA glutaredoxin 1; 80.8 2.3 5.1E-05 25.3 3.0 28 14-41 57-84 (85)
123 KOG1668 Elongation factor 1 be 78.7 2.8 6E-05 30.3 3.2 59 97-162 10-68 (231)
124 cd03418 GRX_GRXb_1_3_like Glut 75.6 3.3 7.1E-05 23.7 2.5 31 7-37 42-73 (75)
125 TIGR02181 GRX_bact Glutaredoxi 74.6 3.8 8.2E-05 23.9 2.6 33 6-38 40-72 (79)
126 KOG0079 GTP-binding protein H- 74.3 2.7 5.9E-05 28.4 2.0 34 142-175 93-127 (198)
127 TIGR02681 phage_pRha phage reg 72.6 3.1 6.6E-05 26.4 1.9 26 16-41 2-28 (108)
128 cd03419 GRX_GRXh_1_2_like Glut 66.1 8.2 0.00018 22.4 2.8 32 7-38 45-76 (82)
129 TIGR02180 GRX_euk Glutaredoxin 64.7 9 0.0002 22.3 2.8 32 7-38 46-77 (84)
130 cd03028 GRX_PICOT_like Glutare 51.7 20 0.00043 21.6 2.7 31 6-36 54-84 (90)
131 COG0695 GrxC Glutaredoxin and 46.3 19 0.00042 21.3 2.0 28 8-35 46-73 (80)
132 TIGR02189 GlrX-like_plant Glut 45.2 30 0.00065 21.4 2.8 30 7-36 53-82 (99)
133 PHA03050 glutaredoxin; Provisi 45.2 25 0.00055 22.2 2.5 29 6-34 60-88 (108)
134 PRK10329 glutaredoxin-like pro 43.6 19 0.0004 21.4 1.7 19 8-26 43-61 (81)
135 PF00462 Glutaredoxin: Glutare 42.8 15 0.00033 19.9 1.2 21 6-26 40-60 (60)
136 PF10022 DUF2264: Uncharacteri 39.0 1.3E+02 0.0029 23.6 6.0 135 16-160 98-241 (361)
137 TIGR00365 monothiol glutaredox 38.4 41 0.00089 20.6 2.7 32 6-37 58-89 (97)
138 PF09098 Dehyd-heme_bind: Quin 33.8 38 0.00083 23.3 2.1 19 27-48 54-72 (167)
139 PF12290 DUF3802: Protein of u 32.6 82 0.0018 20.1 3.3 37 87-128 60-96 (113)
140 PF04564 U-box: U-box domain; 30.6 1.1E+02 0.0024 17.5 4.0 25 15-40 15-39 (73)
141 KOG1752 Glutaredoxin and relat 30.4 65 0.0014 20.3 2.6 31 7-37 59-89 (104)
142 PF04659 Arch_fla_DE: Archaeal 30.3 1.4E+02 0.0031 18.6 4.3 29 112-140 5-34 (99)
143 PF10990 DUF2809: Protein of u 29.0 40 0.00088 20.6 1.5 18 113-130 71-88 (91)
144 PRK15371 effector protein YopJ 27.9 2.7E+02 0.006 21.2 6.1 63 91-156 23-87 (287)
145 PF11553 DUF3231: Protein of u 27.4 2E+02 0.0044 19.5 6.4 54 56-110 20-73 (166)
146 PF03711 OKR_DC_1_C: Orn/Lys/A 27.2 39 0.00086 22.4 1.3 24 16-39 89-112 (136)
147 TIGR01764 excise DNA binding d 25.2 1E+02 0.0022 15.3 2.6 25 13-37 24-48 (49)
148 TIGR03412 iscX_yfhJ FeS assemb 24.6 87 0.0019 17.8 2.2 17 26-42 2-18 (63)
149 PF12972 NAGLU_C: Alpha-N-acet 22.1 3.4E+02 0.0074 20.3 5.7 49 85-134 121-179 (267)
150 cd06891 PX_Vps17p The phosphoi 22.1 70 0.0015 21.4 1.7 18 145-162 111-128 (140)
151 PF07862 Nif11: Nitrogen fixat 21.7 1E+02 0.0022 16.0 2.1 21 146-166 4-24 (49)
152 cd08200 catalase_peroxidase_2 21.7 2E+02 0.0043 22.0 4.2 39 96-134 74-112 (297)
153 PRK10721 hypothetical protein; 21.3 1.1E+02 0.0024 17.5 2.2 18 25-42 4-21 (66)
154 PF12728 HTH_17: Helix-turn-he 21.2 1.4E+02 0.003 15.4 2.7 26 13-38 24-49 (51)
155 PF12622 NpwBP: mRNA biogenesi 21.0 49 0.0011 17.6 0.7 11 9-19 10-20 (48)
No 1
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=100.00 E-value=2.5e-33 Score=199.82 Aligned_cols=170 Identities=47% Similarity=0.793 Sum_probs=138.5
Q ss_pred CcchhhhhCCCCccCeeecCCcccccHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHhccccchhHHHHHHHhhhc
Q 030554 3 GLVDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQPPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEK 82 (175)
Q Consensus 3 ~~~~~~~~nP~~~vP~L~~~g~~l~es~~I~~yL~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (175)
++++|+++||+|+||+|+++|.+|+||.+|++||++++++..|.|.++.+++++++|+.++...+...............
T Consensus 39 ~~~~~~~~nP~g~vP~L~~~g~~l~ES~aI~~yl~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (210)
T TIGR01262 39 RSPEFLALNPQGLVPTLDIDGEVLTQSLAIIEYLEETYPDPPLLPADPIKRARVRALALLIACDIHPLNNLRVLQYLREK 118 (210)
T ss_pred CChhhhhcCCCCcCCEEEECCEEeecHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHhcccChhhhhhHHHHHHhh
Confidence 46789999999999999999999999999999999999877799999999999999999887665543222121111111
Q ss_pred --cCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHHHHHHhhcCCCCccchHHHHHHHHHhcChh
Q 030554 83 --AGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPA 160 (175)
Q Consensus 83 --~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~~~ 160 (175)
.......+...+.+.+.|+.||++|++++++||+|+++|+||+++++++.++ ...+..++.||+|++|+++|.++|+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~ADi~~~~~l~~~-~~~~~~~~~~p~l~~~~~~~~~rp~ 197 (210)
T TIGR01262 119 LGVEEEARNRWYQHWISKGFAALEALLQPHAGAFCVGDTPTLADLCLVPQVYNA-ERFGVDLTPYPTLRRIAAALAALPA 197 (210)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEeeCCCCCHHHHHHHHHHHHH-HHcCCCcccchHHHHHHHHHhcCHH
Confidence 1122334556677999999999999875567999999999999999999887 5556667889999999999999999
Q ss_pred hhhhCCcCCCCCC
Q 030554 161 FQNAAPEKQPDAP 173 (175)
Q Consensus 161 ~~~~~~~~~~~~p 173 (175)
+++++...+|+.|
T Consensus 198 ~~~~~~~~~~~~~ 210 (210)
T TIGR01262 198 FQRAHPENQPDTP 210 (210)
T ss_pred HHHhCcccCCCCC
Confidence 9999999987766
No 2
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=100.00 E-value=2.8e-33 Score=199.70 Aligned_cols=162 Identities=22% Similarity=0.339 Sum_probs=133.3
Q ss_pred CCcchhhhhCCCCccCeeecCCcccccHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHhccccchhHHHHHHHhhh
Q 030554 2 FGLVDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQPPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEE 81 (175)
Q Consensus 2 ~~~~~~~~~nP~~~vP~L~~~g~~l~es~~I~~yL~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (175)
+++++|+++||+|+||+|+++|.+|+||.||++||++++|+..|+|.++.++++++.|+.++...+...... . ..
T Consensus 45 ~~~~~~~~~nP~g~VPvL~~~g~~l~ES~AIl~YL~~~~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~----~-~~ 119 (211)
T PRK09481 45 NLPQDLIDLNPYQSVPTLVDRELTLYESRIIMEYLDERFPHPPLMPVYPVARGESRLMMHRIEKDWYSLMNK----I-VN 119 (211)
T ss_pred cCCHHHHHhCCCCCCCEEEECCEEeeCHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH----H-hc
Confidence 356799999999999999999999999999999999999987899999999999999998766543322111 1 11
Q ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHHHHHHhhcCCCC--ccchHHHHHHHHHhcCh
Q 030554 82 KAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQLYAAVNRFNLDM--TQFPLLLRLHEAYSKLP 159 (175)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l~~~~~~~~~~~--~~~p~l~~~~~~~~~~~ 159 (175)
..+...+.....+.+.+..||++|++ ++||+|+++|+||+++++++.++ ...+.++ +.+|+|++|+++|.++|
T Consensus 120 --~~~~~~~~~~~~l~~~l~~le~~L~~--~~~l~G~~~t~AD~~l~~~~~~~-~~~~~~~~~~~~p~l~~w~~~~~~rp 194 (211)
T PRK09481 120 --GSASEADAARKQLREELLAIAPVFGE--KPYFMSEEFSLVDCYLAPLLWRL-PVLGIELSGPGAKELKGYMTRVFERD 194 (211)
T ss_pred --CCHHHHHHHHHHHHHHHHHHHHHhcc--CCcccCCCccHHHHHHHHHHHHH-HhcCCCCCCCCChhHHHHHHHHhccH
Confidence 12345566778899999999999976 59999999999999999999877 4555554 57999999999999999
Q ss_pred hhhhhCCcCCCCCC
Q 030554 160 AFQNAAPEKQPDAP 173 (175)
Q Consensus 160 ~~~~~~~~~~~~~p 173 (175)
+|++++...++.++
T Consensus 195 ~~~~~~~~~~~~~~ 208 (211)
T PRK09481 195 SFLASLTEAEREMR 208 (211)
T ss_pred HHHHHcCHHHHHHh
Confidence 99999987766655
No 3
>KOG0868 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.3e-32 Score=180.89 Aligned_cols=169 Identities=50% Similarity=0.852 Sum_probs=154.4
Q ss_pred cchhhhhCCCCccCeeecCCcccccHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHhccccchhHHHHHHHhhhcc
Q 030554 4 LVDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQPPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKA 83 (175)
Q Consensus 4 ~~~~~~~nP~~~vP~L~~~g~~l~es~~I~~yL~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (175)
..+|+++||.++||+|++||.+|+||.||++||++++|+++|.|+++..|+..++....+.+.+.+..+..+...+.+..
T Consensus 46 ~~ef~~iNPm~kVP~L~i~g~tl~eS~AII~YLeEt~P~ppLLP~d~~KRA~~r~i~~~i~sgIQPlQNl~vl~~l~ek~ 125 (217)
T KOG0868|consen 46 DSEFKEINPMEKVPTLVIDGLTLTESLAIIEYLEETYPDPPLLPKDPHKRAKARAISLLIASGIQPLQNLSVLKMLNEKE 125 (217)
T ss_pred hhHHhhcCchhhCCeEEECCEEeehHHHHHHHHHhcCCCCCCCCcCHHHHHHHHHHHHHHHhCCCcchhhHHHHHhcccc
Confidence 34899999999999999999999999999999999999999999999999999999999999999988887777766654
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHHHHHHhhcCCCCccchHHHHHHHHHhcChhhhh
Q 030554 84 GADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQN 163 (175)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~ 163 (175)
... -...+..-+.+.|.+||++|....|+|-+||++|+||+.+.+.++.. .++..++..||-+.+..+.+.+.|.|+.
T Consensus 126 ~~~-~~~W~q~~ItkGF~ALEklL~~~aGkycvGDevtiADl~L~pqv~nA-~rf~vdl~PYPti~ri~e~l~elpaFq~ 203 (217)
T KOG0868|consen 126 PGY-GDQWAQHFITKGFTALEKLLKSHAGKYCVGDEVTIADLCLPPQVYNA-NRFHVDLTPYPTITRINEELAELPAFQA 203 (217)
T ss_pred cch-hhHHHHHHHHHhHHHHHHHHHHccCCcccCceeehhhhccchhhhhh-hhccccCCcCchHHHHHHHHHhCHHHHh
Confidence 222 25566677899999999999988899999999999999999999998 8889999999999999999999999999
Q ss_pred hCCcCCCCCCC
Q 030554 164 AAPEKQPDAPS 174 (175)
Q Consensus 164 ~~~~~~~~~p~ 174 (175)
+.++++||+|.
T Consensus 204 ahP~nQPD~P~ 214 (217)
T KOG0868|consen 204 AHPDNQPDTPP 214 (217)
T ss_pred cCCCCCCCCCC
Confidence 99999999995
No 4
>PRK10542 glutathionine S-transferase; Provisional
Probab=99.97 E-value=3.1e-31 Score=187.80 Aligned_cols=158 Identities=23% Similarity=0.341 Sum_probs=129.2
Q ss_pred CcchhhhhCCCCccCeee-cCCcccccHHHHHHHHHHhCCCCCCC-CccHHHHHHHHHHHHHHhccccchhHHHHHHHhh
Q 030554 3 GLVDFLKINPIGYVPALV-DGDFVVSDSFAILMYLEEKYPQPPLL-PSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIE 80 (175)
Q Consensus 3 ~~~~~~~~nP~~~vP~L~-~~g~~l~es~~I~~yL~~~~~~~~l~-p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (175)
++++|+++||.|+||+|+ +||.+|+||.+|++||+++++++.++ |.++.+++++++|+.++.+.+.+.+.... .
T Consensus 39 ~~~~~~~~nP~g~vPvL~~~~g~~l~eS~aI~~YL~~~~~~~~l~~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~----~ 114 (201)
T PRK10542 39 NGDDYLAINPKGQVPALLLDDGTLLTEGVAIMQYLADSVPDRQLLAPVGSLSRYHTIEWLNYIATELHKGFTPLF----R 114 (201)
T ss_pred CChHHHHhCcCCCCCeEEeCCCcEeecHHHHHHHHHHhCcccccCCCCCcHHHHHHHHHHHHHHhhhhhhhhhcc----C
Confidence 457899999999999998 78999999999999999999876665 55788999999999988766654332221 1
Q ss_pred hccCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHHHHHHhhcCCCCccchHHHHHHHHHhcChh
Q 030554 81 EKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPA 160 (175)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~~~ 160 (175)
.. ..+...+.....+.+.|+.||+.|++ ++||+|+++|+||+++++++.+. ...+...+.+|+|.+|+++|.++|+
T Consensus 115 ~~-~~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~G~~~s~ADi~l~~~~~~~-~~~~~~~~~~p~l~~w~~~~~~~p~ 190 (201)
T PRK10542 115 PD-TPEEYKPTVRAQLEKKFQYVDEALAD--EQWICGQRFTIADAYLFTVLRWA-YAVKLNLEGLEHIAAYMQRVAERPA 190 (201)
T ss_pred CC-ChHHHHHHHHHHHHHHHHHHHHHhcC--CCeeeCCCCcHHhHHHHHHHHHh-hccCCCcccchHHHHHHHHHHcCHH
Confidence 11 12233456677899999999999986 58999999999999999999888 5556667789999999999999999
Q ss_pred hhhhCCcC
Q 030554 161 FQNAAPEK 168 (175)
Q Consensus 161 ~~~~~~~~ 168 (175)
|++++.+.
T Consensus 191 ~k~~~~~~ 198 (201)
T PRK10542 191 VAAALKAE 198 (201)
T ss_pred HHHHHHHc
Confidence 99998764
No 5
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=99.97 E-value=4.3e-31 Score=188.92 Aligned_cols=161 Identities=23% Similarity=0.271 Sum_probs=125.1
Q ss_pred CcchhhhhCCCCccCeeec-----CC--cccccHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHhccccchhHHHH
Q 030554 3 GLVDFLKINPIGYVPALVD-----GD--FVVSDSFAILMYLEEKYPQPPLLPSDLKRKAINYQAANIVSSSIQPLQNLAV 75 (175)
Q Consensus 3 ~~~~~~~~nP~~~vP~L~~-----~g--~~l~es~~I~~yL~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 75 (175)
++++|+++||.|+||+|++ || .+|+||.||++||+++++ .+.|.++.++++++.|+.+....+.+.+....
T Consensus 39 ~~~~~~~iNP~gkVP~L~~~~~~d~g~~~~L~ES~AI~~YL~~~~~--~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~ 116 (215)
T PRK13972 39 FRPEFLRISPNNKIPAIVDHSPADGGEPLSLFESGAILLYLAEKTG--LFLSHETRERAATLQWLFWQVGGLGPMLGQNH 116 (215)
T ss_pred CCHHHHhhCcCCCCCEEEeCCCCCCCCceeEEcHHHHHHHHHHhcC--CCCCCCHHHHHHHHHHHHHHhhccCcceeeee
Confidence 4678999999999999996 45 479999999999999986 46777899999999999998777665432111
Q ss_pred HHHhhhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHHHHHHhhcCCCCccchHHHHHHHHH
Q 030554 76 VKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQLYAAVNRFNLDMTQFPLLLRLHEAY 155 (175)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l~~~~~~~~~~~~~~p~l~~~~~~~ 155 (175)
..........+...+.....+.+.|..||+.|.+ ++||+|+++|+||+++++++... ...+..++.||+|.+|+++|
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~Gd~~t~ADi~l~~~~~~~-~~~~~~~~~~P~l~~w~~r~ 193 (215)
T PRK13972 117 HFNHAAPQTIPYAIERYQVETQRLYHVLNKRLEN--SPWLGGENYSIADIACWPWVNAW-TRQRIDLAMYPAVKNWHERI 193 (215)
T ss_pred eeeccCCCCCchHHHHHHHHHHHHHHHHHHHhcc--CccccCCCCCHHHHHHHHHHHHH-hhcCCcchhCHHHHHHHHHH
Confidence 0000011112344566677899999999999986 58999999999999998887544 23355567899999999999
Q ss_pred hcChhhhhhCCcC
Q 030554 156 SKLPAFQNAAPEK 168 (175)
Q Consensus 156 ~~~~~~~~~~~~~ 168 (175)
.++|+|++++...
T Consensus 194 ~~rp~~~~~~~~~ 206 (215)
T PRK13972 194 RSRPATGQALLKA 206 (215)
T ss_pred HhCHHHHHHHHHh
Confidence 9999999887654
No 6
>PRK15113 glutathione S-transferase; Provisional
Probab=99.97 E-value=7.1e-31 Score=187.67 Aligned_cols=163 Identities=23% Similarity=0.195 Sum_probs=127.0
Q ss_pred CcchhhhhCCCCccCeeecCCcccccHHHHHHHHHHhCCCCC---CCCccHHHHHHHHHHHHHHhccccchhHHHHHHHh
Q 030554 3 GLVDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQPP---LLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYI 79 (175)
Q Consensus 3 ~~~~~~~~nP~~~vP~L~~~g~~l~es~~I~~yL~~~~~~~~---l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (175)
+.++|+++||.|+||+|++||.+|+||.+|++||+++++++. ++|.++.+++++++|+.++...+............
T Consensus 46 ~~~~~~~~nP~g~VP~L~~~~~~l~ES~aI~~YL~~~~~~~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (214)
T PRK15113 46 LQPTYQGYSLTRRVPTLQHDDFELSESSAIAEYLEERFAPPAWERIYPADLQARARARQIQAWLRSDLMPLREERPTDVV 125 (214)
T ss_pred cCHHHHhcCCCCCCCEEEECCEEEecHHHHHHHHHHHcCCCCccccCCCCHHHHHHHHHHHHHHHhhhHHHhccCccchh
Confidence 457899999999999999999999999999999999998765 99999999999999999987655432211000000
Q ss_pred hhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHHHHHHhhcCCCCccchHHHHHHHHHhcCh
Q 030554 80 EEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLP 159 (175)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~~ 159 (175)
..........+...+.+.+.+..||++|++. ++|++|+ +|+||+++++++.++ ...+..+. |+|.+|++||.++|
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~-~~~l~G~-~TlADi~l~~~l~~~-~~~~~~~~--p~l~~~~~r~~~rp 200 (214)
T PRK15113 126 FAGAKKAPLSEAGKAAAEKLFAVAERLLAPG-QPNLFGE-WCIADTDLALMLNRL-VLHGDEVP--ERLADYATFQWQRA 200 (214)
T ss_pred ccCCCCCcccHHHHHHHHHHHHHHHHHHhcC-CCEeeCC-ccHHHHHHHHHHHHH-HHcCCCCC--HHHHHHHHHHhcCH
Confidence 0111122334556677899999999999852 4799996 999999999999887 44554443 99999999999999
Q ss_pred hhhhhCCcCCC
Q 030554 160 AFQNAAPEKQP 170 (175)
Q Consensus 160 ~~~~~~~~~~~ 170 (175)
+|++++.+..+
T Consensus 201 ~~~~~~~~~~~ 211 (214)
T PRK15113 201 SVQRWLALSAK 211 (214)
T ss_pred HHHHHHHHhhh
Confidence 99999876543
No 7
>PLN02473 glutathione S-transferase
Probab=99.97 E-value=2.3e-30 Score=185.03 Aligned_cols=164 Identities=26% Similarity=0.268 Sum_probs=130.1
Q ss_pred CCcchhhhhCCCCccCeeecCCcccccHHHHHHHHHHhCCCC--CCCCccHHHHHHHHHHHHHHhccccchhHHHHHH-H
Q 030554 2 FGLVDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQP--PLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVK-Y 78 (175)
Q Consensus 2 ~~~~~~~~~nP~~~vP~L~~~g~~l~es~~I~~yL~~~~~~~--~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~-~ 78 (175)
+++++|+++||+|+||+|+++|.+|+||.+|++||++++++. +|+|.++.+++++++|+.+..+.+.......... .
T Consensus 40 ~~~~~~~~~nP~g~vP~L~~~g~~l~ES~aI~~YL~~~~~~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (214)
T PLN02473 40 QKKPEHLLRQPFGQVPAIEDGDLKLFESRAIARYYATKYADQGTDLLGKTLEHRAIVDQWVEVENNYFYAVALPLVINLV 119 (214)
T ss_pred cCCHHHHhhCCCCCCCeEEECCEEEEehHHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 456789999999999999999999999999999999999753 6889999999999999999888776543322211 1
Q ss_pred hh---hccCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHHHHHHhhcCC--CCccchHHHHHHH
Q 030554 79 IE---EKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQLYAAVNRFNL--DMTQFPLLLRLHE 153 (175)
Q Consensus 79 ~~---~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l~~~~~~~~~--~~~~~p~l~~~~~ 153 (175)
.. .........+....++.+.++.||+.|++ ++|++|+++|+||+++++.+.++...... .++.+|+|.+|++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~Gd~~t~ADi~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~ 197 (214)
T PLN02473 120 FKPRLGEPCDVALVEELKVKFDKVLDVYENRLAT--NRYLGGDEFTLADLTHMPGMRYIMNETSLSGLVTSRENLNRWWN 197 (214)
T ss_pred hcccccCCCChHHHHHHHHHHHHHHHHHHHHhcc--CCcccCCCCCHHHHHHHHHHHHHHhccccHHHHhcCHHHHHHHH
Confidence 11 11112345566778899999999999986 48999999999999999998876322221 1468999999999
Q ss_pred HHhcChhhhhhCCc
Q 030554 154 AYSKLPAFQNAAPE 167 (175)
Q Consensus 154 ~~~~~~~~~~~~~~ 167 (175)
+|.++|+|++++..
T Consensus 198 ~~~~~p~~~~~~~~ 211 (214)
T PLN02473 198 EISARPAWKKLMEL 211 (214)
T ss_pred HHhcChhhHHHHHH
Confidence 99999999998753
No 8
>PLN02395 glutathione S-transferase
Probab=99.97 E-value=3.3e-30 Score=184.33 Aligned_cols=165 Identities=24% Similarity=0.310 Sum_probs=130.8
Q ss_pred CCcchhhhhCCCCccCeeecCCcccccHHHHHHHHHHhCCC--CCCCCccHHHHHHHHHHHHHHhccccchhHHHHHH-H
Q 030554 2 FGLVDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQ--PPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVK-Y 78 (175)
Q Consensus 2 ~~~~~~~~~nP~~~vP~L~~~g~~l~es~~I~~yL~~~~~~--~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~-~ 78 (175)
+++++|+++||+|+||+|+++|.+|+||.+|++||+++++. +.++|.++.+++++++|+.+....+.+.+...... .
T Consensus 39 ~~~~~~~~~nP~g~vP~L~~~~~~l~ES~aI~~YL~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (215)
T PLN02395 39 HKQPEYLALQPFGVVPVIVDGDYKIFESRAIMRYYAEKYRSQGPDLLGKTIEERGQVEQWLDVEATSYHPPLLNLTLHIL 118 (215)
T ss_pred cCCHHHHhhCCCCCCCEEEECCEEEEcHHHHHHHHHHHcCCCCcCcCCCChhHHHHHHHHHHHHHHhcCchHHHHHHHHH
Confidence 35678999999999999999999999999999999999975 35899999999999999999887765543322211 1
Q ss_pred hh---hccCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHHHHHHhhcC--CCCccchHHHHHHH
Q 030554 79 IE---EKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQLYAAVNRFN--LDMTQFPLLLRLHE 153 (175)
Q Consensus 79 ~~---~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l~~~~~~~~--~~~~~~p~l~~~~~ 153 (175)
.. +.....+..+.....+.+.+..||+.|++ ++|++|+++|+||+++++++.++....+ ...+.+|+|.+|++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~G~~~s~ADi~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~ 196 (215)
T PLN02395 119 FASKMGFPADEKVIKESEEKLAKVLDVYEARLSK--SKYLAGDFVSLADLAHLPFTEYLVGPIGKAYLIKDRKHVSAWWD 196 (215)
T ss_pred hhhhccCCCcHHHHHHHHHHHHHHHHHHHHHhcC--CccccCCCcCHHHHHHHHHHHHHhcccchhhhhccCchHHHHHH
Confidence 11 11123345566788899999999999976 4899999999999999998877622222 23567999999999
Q ss_pred HHhcChhhhhhCCcC
Q 030554 154 AYSKLPAFQNAAPEK 168 (175)
Q Consensus 154 ~~~~~~~~~~~~~~~ 168 (175)
+|.++|++++++...
T Consensus 197 ~~~~rp~~k~~~~~~ 211 (215)
T PLN02395 197 DISSRPAWKEVLAKY 211 (215)
T ss_pred HHHcChHHHHHHHHh
Confidence 999999999998654
No 9
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=2.9e-29 Score=179.03 Aligned_cols=158 Identities=35% Similarity=0.509 Sum_probs=132.2
Q ss_pred CCcchhhhhCCCCccCeeecCC-cccccHHHHHHHHHHhCCCCCCCCccHH---HHHHHHHHHHHHhccccchhHHHHHH
Q 030554 2 FGLVDFLKINPIGYVPALVDGD-FVVSDSFAILMYLEEKYPQPPLLPSDLK---RKAINYQAANIVSSSIQPLQNLAVVK 77 (175)
Q Consensus 2 ~~~~~~~~~nP~~~vP~L~~~g-~~l~es~~I~~yL~~~~~~~~l~p~~~~---~~a~~~~~~~~~~~~~~~~~~~~~~~ 77 (175)
+++++|+++||.|+||+|++++ .+|+||.+|++||++++|++.|+|.++. +++....|+.+....+.+.+......
T Consensus 37 ~~~~~~~~~nP~gkVPvL~~~~~~~l~ES~AI~~YL~~~~~~~~l~p~~~~~r~~r~~~~~~~~~~~~~~~~~~~~~~~~ 116 (211)
T COG0625 37 QKPPDFLALNPLGKVPALVDDDGEVLTESGAILEYLAERYPGPPLLPADPLARRARALLLWWLFFAASDLHPVIGQRRRA 116 (211)
T ss_pred cCCHHHHhcCCCCCCCEEeeCCCCeeecHHHHHHHHHhhCCCCCcCCCCchhHHHHHHHHHHHHHHHhcccHHHHHHHhh
Confidence 4678999999999999999554 5999999999999999987559998774 88888899999988887776655444
Q ss_pred HhhhccC-chHHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHHHHHHhhcCCCCccchHHHHHHHHHh
Q 030554 78 YIEEKAG-ADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQLYAAVNRFNLDMTQFPLLLRLHEAYS 156 (175)
Q Consensus 78 ~~~~~~~-~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l~~~~~~~~~~~~~~p~l~~~~~~~~ 156 (175)
....... .....+.....+...+..+|..|+. ++|++|+++|+||+++++.+.++ ...+...+.+|++.+|++||.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~G~~~tiAD~~~~~~~~~~-~~~~~~~~~~p~l~~w~~r~~ 193 (211)
T COG0625 117 LLGSEPELLEAALEAARAEIRALLALLEALLAD--GPYLAGDRFTIADIALAPLLWRL-ALLGEELADYPALKAWYERVL 193 (211)
T ss_pred hccccccccHHHHHHHHHHHHHHHHHHHHHhcc--CCcccCCCCCHHHHHHHHHHHHh-hhcCcccccChHHHHHHHHHH
Confidence 3111111 3467788889999999999999997 59999999999999999999987 666666688999999999999
Q ss_pred cChhhh
Q 030554 157 KLPAFQ 162 (175)
Q Consensus 157 ~~~~~~ 162 (175)
++|+++
T Consensus 194 ~rp~~~ 199 (211)
T COG0625 194 ARPAFR 199 (211)
T ss_pred cCCchh
Confidence 999965
No 10
>PRK10357 putative glutathione S-transferase; Provisional
Probab=99.96 E-value=1.1e-28 Score=174.87 Aligned_cols=163 Identities=23% Similarity=0.233 Sum_probs=126.6
Q ss_pred CcchhhhhCCCCccCeee-cCCcccccHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHhccccchhHHHHHHHhhh
Q 030554 3 GLVDFLKINPIGYVPALV-DGDFVVSDSFAILMYLEEKYPQPPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEE 81 (175)
Q Consensus 3 ~~~~~~~~nP~~~vP~L~-~~g~~l~es~~I~~yL~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (175)
+++++.++||.|+||+|+ ++|.+|+||.+|++||++++++..|+|.++.+++++++|..+..+.+..............
T Consensus 36 ~~~~~~~~nP~g~vP~L~~~~g~~l~eS~aI~~yL~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (202)
T PRK10357 36 ADNGVAQYNPLGKVPALVTEEGECWFDSPIIAEYIELLNVAPAMLPRDPLAALRVRQLEALADGIMDAALVSVREQARPA 115 (202)
T ss_pred CchhhhhcCCccCCCeEEeCCCCeeecHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 345788999999999998 7899999999999999999987779999999999999998887665544332211111111
Q ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHHHHHHhh-cCCC-CccchHHHHHHHHHhcCh
Q 030554 82 KAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQLYAAVNR-FNLD-MTQFPLLLRLHEAYSKLP 159 (175)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l~~~~~~-~~~~-~~~~p~l~~~~~~~~~~~ 159 (175)
........+.....+.+.|+.||++|.+ ++ |+|+++|+||+++++++.++... .+.. ...+|+|.+|+++|.++|
T Consensus 116 ~~~~~~~~~~~~~~l~~~l~~le~~L~~--~~-l~Gd~~t~ADi~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~i~~rp 192 (202)
T PRK10357 116 AQQSEDELLRQREKINRSLDALEGYLVD--GT-LKTDTVNLATIAIACAVGYLNFRRVAPGWCVDRPHLVKLVENLFQRE 192 (202)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHhhcc--Cc-ccCCCcCHHHHHHHHHHHHHHhcccCcchhhcChHHHHHHHHHhcCh
Confidence 1122345566778899999999999986 46 99999999999999999877321 2222 367999999999999999
Q ss_pred hhhhhCCcC
Q 030554 160 AFQNAAPEK 168 (175)
Q Consensus 160 ~~~~~~~~~ 168 (175)
+|+++.+..
T Consensus 193 ~~~~~~~~~ 201 (202)
T PRK10357 193 SFARTEPPK 201 (202)
T ss_pred hhhhcCCCC
Confidence 999987653
No 11
>PRK11752 putative S-transferase; Provisional
Probab=99.96 E-value=1.2e-28 Score=180.89 Aligned_cols=161 Identities=24% Similarity=0.293 Sum_probs=123.1
Q ss_pred CcchhhhhCCCCccCeeecC----CcccccHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHhccccchhHHHHHHH
Q 030554 3 GLVDFLKINPIGYVPALVDG----DFVVSDSFAILMYLEEKYPQPPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKY 78 (175)
Q Consensus 3 ~~~~~~~~nP~~~vP~L~~~----g~~l~es~~I~~yL~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 78 (175)
++++|+++||.|+||+|+++ |.+|+||.+|++||+++++ +|+|.++.++++++.|+.+....+. .....+...
T Consensus 88 ~~~e~~~iNP~GkVP~Lv~~dg~~~~~L~ES~AIl~YL~~~~~--~L~P~~~~era~v~~wl~~~~~~~~-~~~~~~~~~ 164 (264)
T PRK11752 88 FSSGFVEINPNSKIPALLDRSGNPPIRVFESGAILLYLAEKFG--AFLPKDLAARTETLNWLFWQQGSAP-FLGGGFGHF 164 (264)
T ss_pred cCHHHHhhCCCCCCCEEEeCCCCCCeEEEcHHHHHHHHHHhcC--CcCCCCHHHHHHHHHHHHHHhhhhh-HHHHHHHHH
Confidence 46789999999999999953 3689999999999999997 4899999999999999998765431 111111111
Q ss_pred h-hhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHHHHHHhh--cC----CCCccchHHHHH
Q 030554 79 I-EEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQLYAAVNR--FN----LDMTQFPLLLRL 151 (175)
Q Consensus 79 ~-~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l~~~~~~--~~----~~~~~~p~l~~~ 151 (175)
. ..........+....++.+.|+.||++|++ ++||+|+++|+|||++++++.++... ++ ...+.||+|.+|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~L~~le~~L~~--~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~~P~L~~w 242 (264)
T PRK11752 165 YAYAPEKIEYAINRFTMEAKRQLDVLDKQLAE--HEYIAGDEYTIADIAIWPWYGNLVLGNLYDAAEFLDVGSYKHVQRW 242 (264)
T ss_pred HHhCCccchHHHHHHHHHHHHHHHHHHHHhcc--CCCCCCCccCHHHHHHHHHHHHHhhccccccccccCcccCHHHHHH
Confidence 1 111112234566677889999999999986 58999999999999999988766221 11 235679999999
Q ss_pred HHHHhcChhhhhhCCcC
Q 030554 152 HEAYSKLPAFQNAAPEK 168 (175)
Q Consensus 152 ~~~~~~~~~~~~~~~~~ 168 (175)
+++|.++|+|++++..+
T Consensus 243 ~~rv~~rPs~k~~~~~~ 259 (264)
T PRK11752 243 AKEIAERPAVKRGRIVN 259 (264)
T ss_pred HHHHHhCHHHHHHHhcc
Confidence 99999999999988765
No 12
>PTZ00057 glutathione s-transferase; Provisional
Probab=99.96 E-value=3.1e-28 Score=172.92 Aligned_cols=152 Identities=22% Similarity=0.268 Sum_probs=112.8
Q ss_pred hhCCCCccCeeecCCcccccHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHhccccchhHHHHHHHhhhccCchHH
Q 030554 9 KINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQPPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADER 88 (175)
Q Consensus 9 ~~nP~~~vP~L~~~g~~l~es~~I~~yL~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (175)
++||+|+||+|++||.+|+||.||++||+++++ +.+.+..+++.+......+.+........ ... ....
T Consensus 52 ~~nP~g~vP~L~~~~~~l~eS~AI~~YLa~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----~~~~ 120 (205)
T PTZ00057 52 KDTPFEQVPILEMDNIIFAQSQAIVRYLSKKYK---ICGESELNEFYADMIFCGVQDIHYKFNNT---NLF-----KQNE 120 (205)
T ss_pred CCCCCCCCCEEEECCEEEecHHHHHHHHHHHcC---CCCCCHHHHHHHHHHHHHHHHHHHHHhhh---HHH-----HHHH
Confidence 589999999999999999999999999999997 44544444444443333222211111110 000 1122
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHHHHHHhhcCCCCccchHHHHHHHHHhcChhhhhhCCcC
Q 030554 89 DIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAAPEK 168 (175)
Q Consensus 89 ~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~ 168 (175)
.+.....+.+.+..||+.|.+++++|++|+++|+||+++++++.++....+..++.||+|.+|++||.++|++++++.++
T Consensus 121 ~~~~~~~~~~~l~~le~~L~~~~~~~l~Gd~~T~AD~~l~~~~~~~~~~~~~~l~~~P~l~~~~~r~~~~P~~k~y~~~~ 200 (205)
T PTZ00057 121 TTFLNEELPKWSGYFENILKKNHCNYFVGDNLTYADLAVFNLYDDIETKYPNSLKNFPLLKAHNEFISNLPNIKNYISNR 200 (205)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCeeeCCcccHHHHHHHHHHHHHHHhChhhhccChhHHHHHHHHHhChHHHHHHHhC
Confidence 24556789999999999998755689999999999999999988873334556788999999999999999999999888
Q ss_pred CCC
Q 030554 169 QPD 171 (175)
Q Consensus 169 ~~~ 171 (175)
..+
T Consensus 201 ~~~ 203 (205)
T PTZ00057 201 KES 203 (205)
T ss_pred CCc
Confidence 654
No 13
>KOG0406 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=5.4e-28 Score=169.90 Aligned_cols=159 Identities=21% Similarity=0.313 Sum_probs=131.9
Q ss_pred CcchhhhhC-CCCccCeeecCCcccccHHHHHHHHHHhCC-CCCCCCccHHHHHHHHHHHHHHhccccchhHHHHHHHhh
Q 030554 3 GLVDFLKIN-PIGYVPALVDGDFVVSDSFAILMYLEEKYP-QPPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIE 80 (175)
Q Consensus 3 ~~~~~~~~n-P~~~vP~L~~~g~~l~es~~I~~yL~~~~~-~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (175)
++++|++.| +.++||+|++||+.|+||..|++||++.++ +++++|.+|.+|++.+.|.++++..+..........
T Consensus 45 Ks~~ll~~np~hkKVPvL~Hn~k~i~ESliiveYiDe~w~~~~~iLP~DPy~Ra~arfwa~~id~~~~~~~~~~~~~--- 121 (231)
T KOG0406|consen 45 KSEWLLEKNPVHKKVPVLEHNGKPICESLIIVEYIDETWPSGPPILPSDPYERAQARFWAEYIDKKVFFVGRFVVAA--- 121 (231)
T ss_pred CCHHHHHhccccccCCEEEECCceehhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHhHHHHHHHHHHhh---
Confidence 789999999 889999999999999999999999999999 589999999999999999999997665433222211
Q ss_pred hccCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHHHHHHh---hcC---C-CCccchHHHHHHH
Q 030554 81 EKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQLYAAVN---RFN---L-DMTQFPLLLRLHE 153 (175)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l~~~~~---~~~---~-~~~~~p~l~~~~~ 153 (175)
..++..+.+.+.+.+.|..||+.|.. +++|+.|++++++|+++++.+.+... ..+ . ..+.+|+|.+|.+
T Consensus 122 ---~~~e~~~~~~~e~~e~l~~lE~el~k-~k~~fgG~~~G~vDi~~~p~~~~~~~~~~~~~~~~~~~~~~~P~L~~W~~ 197 (231)
T KOG0406|consen 122 ---KGGEEQEAAKEELREALKVLEEELGK-GKDFFGGETIGFVDIAIGPSFERWLAVLEKFGGVKFIIEEETPKLIKWIK 197 (231)
T ss_pred ---cCchHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCCCcCHhhhhHHhhHHHHHHHHHHhcCcccCCCCCCccHHHHHH
Confidence 13355677788899999999999994 47999999999999999976655422 112 2 2468999999999
Q ss_pred HHhcChhhhhhCCcC
Q 030554 154 AYSKLPAFQNAAPEK 168 (175)
Q Consensus 154 ~~~~~~~~~~~~~~~ 168 (175)
||.+++++++++++.
T Consensus 198 ~~~~~~~V~~~~p~~ 212 (231)
T KOG0406|consen 198 RMKEDEAVKAVLPDS 212 (231)
T ss_pred HHhcChhHHhhcCCH
Confidence 999999999998764
No 14
>PLN02378 glutathione S-transferase DHAR1
Probab=99.95 E-value=1e-27 Score=171.16 Aligned_cols=149 Identities=30% Similarity=0.348 Sum_probs=110.8
Q ss_pred CcchhhhhCCCCccCeeecCCcccccHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHhccccchhHHHHHHHhhhc
Q 030554 3 GLVDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQPPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEK 82 (175)
Q Consensus 3 ~~~~~~~~nP~~~vP~L~~~g~~l~es~~I~~yL~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (175)
++++|+++||+|+||+|+++|.+|+||.+|++||++++++..+. ++.+++.+...+.. .+.. .....
T Consensus 47 ~~~~~l~inP~G~VPvL~~~~~~l~ES~aI~~YL~~~~~~~~l~--~~~~~a~i~~~~~~-------~~~~----~~~~~ 113 (213)
T PLN02378 47 KPQWFLDISPQGKVPVLKIDDKWVTDSDVIVGILEEKYPDPPLK--TPAEFASVGSNIFG-------TFGT----FLKSK 113 (213)
T ss_pred CCHHHHHhCCCCCCCEEEECCEEecCHHHHHHHHHHhCCCCCCC--CHHHHHHHHHHHHH-------HHHH----HHhcC
Confidence 56789999999999999999999999999999999999865553 45666665443211 1111 11111
Q ss_pred cCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHHHHHHhhc----CCC-CccchHHHHHHHHHhc
Q 030554 83 AGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQLYAAVNRF----NLD-MTQFPLLLRLHEAYSK 157 (175)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l~~~~~~~----~~~-~~~~p~l~~~~~~~~~ 157 (175)
. ..+.....+.+.|..||+.|..++++|++|+++|+||+++++++.++.... +.+ .+.+|+|.+|+++|.+
T Consensus 114 ~----~~~~~~~~~~~~l~~le~~L~~~~~~fl~Gd~~T~ADi~l~~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~ 189 (213)
T PLN02378 114 D----SNDGSEHALLVELEALENHLKSHDGPFIAGERVSAVDLSLAPKLYHLQVALGHFKSWSVPESFPHVHNYMKTLFS 189 (213)
T ss_pred C----hhhHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCchhhHHHHHHHHHHHHHHHHhcCCCchhHhHHHHHHHHHHhc
Confidence 0 112334567788999999998544699999999999999999987763211 222 3679999999999999
Q ss_pred ChhhhhhCCcC
Q 030554 158 LPAFQNAAPEK 168 (175)
Q Consensus 158 ~~~~~~~~~~~ 168 (175)
+|++++++..+
T Consensus 190 rpa~~~~~~~~ 200 (213)
T PLN02378 190 LDSFEKTKTEE 200 (213)
T ss_pred CCCeecccCCh
Confidence 99999988765
No 15
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=99.95 E-value=8.8e-27 Score=167.24 Aligned_cols=152 Identities=24% Similarity=0.256 Sum_probs=114.2
Q ss_pred CcchhhhhCCCCccCeeecCCcccccHHHHHHHHHHhCCC---CCCCCccHHHHHHHHHHHHHHhccccchhHHHHHHHh
Q 030554 3 GLVDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQ---PPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYI 79 (175)
Q Consensus 3 ~~~~~~~~nP~~~vP~L~~~g~~l~es~~I~~yL~~~~~~---~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (175)
++++|+++||.|+||+|+++|.+|+||.+|++||+++++. +.+.|.++..++....+.. .+ ..+.
T Consensus 46 ~~~~fl~inP~g~vPvL~~~g~~l~ES~aI~eYL~e~~~~~~~p~l~p~~~~~~~~~~~l~~--------~~----~~~~ 113 (236)
T TIGR00862 46 KPEDLQNLAPGTHPPFLTYNTEVKTDVNKIEEFLEETLCPPRYPKLSPKHPESNTAGLDIFA--------KF----SAYI 113 (236)
T ss_pred CCHHHHHHCcCCCCCEEEECCEEeecHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHHHH--------HH----HHHH
Confidence 5689999999999999999999999999999999999964 3455555554443211111 11 1111
Q ss_pred hhccCchHHHHHHHHHHHHHHHHHHHHHhh----------------cCCCcccCCCccHHHHHhHHHHHHHHh----hcC
Q 030554 80 EEKAGADERDIWAKTHIGKGFAALEKLLKD----------------YAGKYATGDEVFLADLYLAPQLYAAVN----RFN 139 (175)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~l~~le~~L~~----------------~~~~~l~G~~~t~aD~~~~~~l~~~~~----~~~ 139 (175)
... .+...+...+.+.+.|..||+.|.+ .+++||.|+++|+|||++++.+.++.. ..+
T Consensus 114 ~~~--~~~~~~~~~~~l~~~l~~Le~~L~~~~~~~~~~~~~~~~~~~~~~f~~Gd~~tlaD~~l~p~l~~l~~~~~~~~~ 191 (236)
T TIGR00862 114 KNS--NPEANDNLEKGLLKALKKLDDYLNSPLPEEIDEDSAEDEKVSRRKFLDGDELTLADCNLLPKLHIVKVVAKKYRN 191 (236)
T ss_pred HcC--CHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccCCCcccCCccchhhHHHHHHHHHHHHHHHHHhC
Confidence 111 1233345567789999999999973 136999999999999999999988842 125
Q ss_pred CC-CccchHHHHHHHHHhcChhhhhhCCcC
Q 030554 140 LD-MTQFPLLLRLHEAYSKLPAFQNAAPEK 168 (175)
Q Consensus 140 ~~-~~~~p~l~~~~~~~~~~~~~~~~~~~~ 168 (175)
++ .+++|+|.+|++++.++++|+.+++..
T Consensus 192 ~~i~~~~p~l~~w~~~~~~~~sf~~t~p~~ 221 (236)
T TIGR00862 192 FDIPAEFTGVWRYLSNAYAREEFTNTCPDD 221 (236)
T ss_pred cCccccCchHHHHHHHHhccchHHhhCCCh
Confidence 66 578999999999999999999998765
No 16
>KOG0867 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=1.2e-26 Score=166.64 Aligned_cols=163 Identities=33% Similarity=0.445 Sum_probs=135.8
Q ss_pred CCcchhhhhCCCCccCeeecCCcccccHHHHHHHHHHhCC-CCC-CCCccHHHHHHHHHHHHHHhccccchh--HHHHHH
Q 030554 2 FGLVDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKYP-QPP-LLPSDLKRKAINYQAANIVSSSIQPLQ--NLAVVK 77 (175)
Q Consensus 2 ~~~~~~~~~nP~~~vP~L~~~g~~l~es~~I~~yL~~~~~-~~~-l~p~~~~~~a~~~~~~~~~~~~~~~~~--~~~~~~ 77 (175)
+++++|+++||+|+||+|+|+|..++||.||+.||.++|. ... ++|.+..+++.+++|+.+..+.+.... ......
T Consensus 40 ~~~pefl~~nP~~kVP~l~d~~~~l~eS~AI~~Yl~~ky~~~~~~l~p~~~~~ra~v~~~l~~~~~~l~~~~~~~~~~~p 119 (226)
T KOG0867|consen 40 QKSPEFLKLNPLGKVPALEDGGLTLWESHAILRYLAEKYGPLGGILLPKDLKERAIVDQWLEFENGVLDPVTFERPILAP 119 (226)
T ss_pred cCCHHHHhcCcCCCCCeEecCCeEEeeHHHHHHHHHHHcCCCCcccCCcCHHHHHHHHHHHHhhhcccccccccceeeec
Confidence 6789999999999999999999999999999999999986 334 899999999999999999998887763 222223
Q ss_pred HhhhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHHHHHH-hhc-CCCCccchHHHHHHHHH
Q 030554 78 YIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQLYAAV-NRF-NLDMTQFPLLLRLHEAY 155 (175)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l~~~~-~~~-~~~~~~~p~l~~~~~~~ 155 (175)
..................+...+..+|..|.+ +.|+.|+++|+||+.+.+.+..+. ... .....++|++.+|++++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~--~~yl~g~~~tlADl~~~~~~~~~~~~~~~~~~~~~~p~v~~W~~~~ 197 (226)
T KOG0867|consen 120 LLVGLPLNPTAVKELEAKLRKALDNLERFLKT--QVYLAGDQLTLADLSLASTLSQFQGKFATEKDFEKYPKVARWYERI 197 (226)
T ss_pred ceecccCcchhhHHHHHHHHHHHHHHHHHHcc--CCcccCCcccHHHHHHhhHHHHHhHhhhhhhhhhhChHHHHHHHHH
Confidence 22222224567788889999999999999997 599999999999999999998873 222 33467899999999999
Q ss_pred hcChhhhhhCC
Q 030554 156 SKLPAFQNAAP 166 (175)
Q Consensus 156 ~~~~~~~~~~~ 166 (175)
.++|+++++..
T Consensus 198 ~~~P~~~e~~~ 208 (226)
T KOG0867|consen 198 QKRPAYEEANE 208 (226)
T ss_pred HhCccHHHHHH
Confidence 99999888654
No 17
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=99.94 E-value=1e-25 Score=164.87 Aligned_cols=147 Identities=25% Similarity=0.341 Sum_probs=110.9
Q ss_pred CcchhhhhCCCCccCeeecCCcccccHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHhccccchhHHHHHHHhhhc
Q 030554 3 GLVDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQPPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEK 82 (175)
Q Consensus 3 ~~~~~~~~nP~~~vP~L~~~g~~l~es~~I~~yL~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (175)
++++|+++||.|+||+|+++|..|+||.+|++||++++|++.+. ++.+++.++.++... + .......
T Consensus 100 ~~~~fl~iNP~GkVPvL~~d~~~L~ES~aI~~YL~e~~p~~~L~--~~~era~i~~~l~~~-------~----~~~~~~~ 166 (265)
T PLN02817 100 KPEWFLKISPEGKVPVVKLDEKWVADSDVITQALEEKYPDPPLA--TPPEKASVGSKIFST-------F----IGFLKSK 166 (265)
T ss_pred CCHHHHhhCCCCCCCEEEECCEEEecHHHHHHHHHHHCCCCCCC--CHHHHHHHHHHHHHH-------H----HHHhccC
Confidence 57789999999999999988889999999999999999976664 466777766543211 1 0111111
Q ss_pred cCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHHHHHHhhc----CCC-CccchHHHHHHHHHhc
Q 030554 83 AGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQLYAAVNRF----NLD-MTQFPLLLRLHEAYSK 157 (175)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l~~~~~~~----~~~-~~~~p~l~~~~~~~~~ 157 (175)
... +.....+.+.|..||+.|+++ ++||+|+++|+||+++++.+.++.... +.+ .+.+|+|.+|+++|.+
T Consensus 167 --~~~--~~~~~~l~~~l~~LE~~L~~~-g~yl~Gd~~SlADi~l~p~L~~l~~~~~~~~~~~i~~~~P~L~~w~~ri~~ 241 (265)
T PLN02817 167 --DPG--DGTEQALLDELTSFDDYIKEN-GPFINGEKISAADLSLGPKLYHLEIALGHYKNWSVPDSLPFVKSYMKNIFS 241 (265)
T ss_pred --Ccc--hHHHHHHHHHHHHHHHHHhcC-CCeeCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHhc
Confidence 111 122356778899999999853 699999999999999999998763221 222 3679999999999999
Q ss_pred ChhhhhhCCc
Q 030554 158 LPAFQNAAPE 167 (175)
Q Consensus 158 ~~~~~~~~~~ 167 (175)
+|+|+++++.
T Consensus 242 rps~~~~~~~ 251 (265)
T PLN02817 242 MESFVKTRAL 251 (265)
T ss_pred chhHhhcCCC
Confidence 9999998874
No 18
>KOG1695 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.93 E-value=5.4e-25 Score=153.73 Aligned_cols=160 Identities=22% Similarity=0.219 Sum_probs=128.6
Q ss_pred hhhhCCCCccCeeecCCcccccHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHhccccchhHHHHHHHhhhccCch
Q 030554 7 FLKINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQPPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGAD 86 (175)
Q Consensus 7 ~~~~nP~~~vP~L~~~g~~l~es~~I~~yL~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (175)
.+...|+|+||+|..||..|.+|.||++||+++++ +.++++.+.++++...+.+.+.....+...+.....+. ..
T Consensus 43 ~K~~~pfgqlP~l~vDg~~i~QS~AI~RyLArk~g---l~Gkt~~E~a~vD~i~d~~~D~~~~~~~~~~~~~~~g~--~~ 117 (206)
T KOG1695|consen 43 LKDKMPFGQLPVLEVDGKKLVQSRAILRYLARKFG---LAGKTEEEEAWVDMIVDQFKDFRWEIFRQPYTAPEAGK--SE 117 (206)
T ss_pred hcccCCCCCCCEEeECCEeeccHHHHHHHHHHHhC---cCCCCHHHHHHHHHHHHhhhhHHHHHHHHhhhhhhhcc--ch
Confidence 45668999999999999999999999999999997 99999999999999999888776664433332211111 11
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHHHHHHhhcCCC-CccchHHHHHHHHHhcChhhhhh
Q 030554 87 ERDI-WAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQLYAAVNRFNLD-MTQFPLLLRLHEAYSKLPAFQNA 164 (175)
Q Consensus 87 ~~~~-~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l~~~~~~~~~~-~~~~p~l~~~~~~~~~~~~~~~~ 164 (175)
...+ .......+.+..+++.|..++++||+||++|+||+.++..+..+......+ .+.+|+|+++.++|.++|.++++
T Consensus 118 ~~~~~~~~Pa~~~~~~~~~~~L~~~~sgflvGd~lT~aDl~i~e~l~~l~~~~~~~~~~~~P~L~a~~~kv~~~p~ik~~ 197 (206)
T KOG1695|consen 118 EELDKLYLPAKPKYFKILEKILKKNKSGFLVGDKLTWADLVIAEHLDTLEELLDPSALDHFPKLKAFKERVSSIPNIKKY 197 (206)
T ss_pred hhhhhhhccchHHHHHHHHHHHHhCCCCeeecCcccHHHHHHHHHHHHHHHhcCchhhccChHHHHHHHHHhcCchHHHH
Confidence 1112 566677889999999999777789999999999999999999884433333 56789999999999999999999
Q ss_pred CCcCCCC
Q 030554 165 APEKQPD 171 (175)
Q Consensus 165 ~~~~~~~ 171 (175)
+.++...
T Consensus 198 i~~r~~t 204 (206)
T KOG1695|consen 198 LESRPVT 204 (206)
T ss_pred HhcCCCC
Confidence 9888653
No 19
>PRK10387 glutaredoxin 2; Provisional
Probab=99.91 E-value=1.1e-23 Score=150.07 Aligned_cols=147 Identities=20% Similarity=0.159 Sum_probs=105.4
Q ss_pred hhhCCCCccCeee-cCCcccccHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHhccccchhHHHHHHH--------
Q 030554 8 LKINPIGYVPALV-DGDFVVSDSFAILMYLEEKYPQPPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKY-------- 78 (175)
Q Consensus 8 ~~~nP~~~vP~L~-~~g~~l~es~~I~~yL~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~-------- 78 (175)
.+.||.|+||+|+ ++|..|+||.+|++||+++||++.+.+ .+++.+++|++++...+...+...+...
T Consensus 40 ~~~~p~~~VPvL~~~~g~~l~eS~aI~~yL~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (210)
T PRK10387 40 IRMIGQKQVPILQKDDGSYMPESLDIVHYIDELDGKPLLTG---KRSPAIEEWLRKVFGYLNKLLYPRFAKADLPEFATP 116 (210)
T ss_pred HHhcCCcccceEEecCCeEecCHHHHHHHHHHhCCCccCCC---cccHHHHHHHHHHHHHhhcchhcccccCCCcccCCH
Confidence 6789999999995 899999999999999999998754532 2567788888776544433221111000
Q ss_pred ----------hhhccCch---HHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHHHHHHhhcCCCCccc
Q 030554 79 ----------IEEKAGAD---ERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQLYAAVNRFNLDMTQF 145 (175)
Q Consensus 79 ----------~~~~~~~~---~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l~~~~~~~~~~~~~~ 145 (175)
.......+ .........+.+.|+.||++|++ +||+|+++|+||+++++++.++ ...+. ++.+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~---~~l~G~~~s~ADi~l~~~l~~~-~~~~~-~~~~ 191 (210)
T PRK10387 117 SARQYFIDKKEASIGDFDALLAHTPGLIKEINADLRALDPLIVK---PNAVNGELSTDDIHLFPILRNL-TLVKG-IEWP 191 (210)
T ss_pred HHHHHHHHhHHhccCCHHHHHhcCHHHHHHHHHHHHHHHHHhcC---ccccCCCCCHHHHHHHHHHhcc-eeecC-CCCC
Confidence 00000000 01134567899999999999963 9999999999999999999988 43321 2346
Q ss_pred hHHHHHHHHHhcChhhh
Q 030554 146 PLLLRLHEAYSKLPAFQ 162 (175)
Q Consensus 146 p~l~~~~~~~~~~~~~~ 162 (175)
|+|.+|++||.++|++.
T Consensus 192 p~l~~w~~r~~~r~~~~ 208 (210)
T PRK10387 192 PRVADYRDNMSKKTQVP 208 (210)
T ss_pred HHHHHHHHHHHHHhCCC
Confidence 99999999999999863
No 20
>PLN02907 glutamate-tRNA ligase
Probab=99.87 E-value=3.7e-21 Score=156.62 Aligned_cols=134 Identities=12% Similarity=0.127 Sum_probs=108.0
Q ss_pred hhCCCCccCeee-cCCcccccHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHhccccchhHHHHHHHhhhccCchH
Q 030554 9 KINPIGYVPALV-DGDFVVSDSFAILMYLEEKYPQPPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADE 87 (175)
Q Consensus 9 ~~nP~~~vP~L~-~~g~~l~es~~I~~yL~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (175)
..+|+|+||+|+ ++|..|+||.||++||++.++...|+|.++.+++++++|+.+...... .
T Consensus 31 ~~~p~GkVPvLv~ddG~~L~ES~AIl~YLa~~~p~~~L~p~d~~erAqV~qWL~~~~~~~~-----------------~- 92 (722)
T PLN02907 31 PSLKSGSAPTLLFSSGEKLTGTNVLLRYIARSASLPGFYGQDAFESSQVDEWLDYAPTFSS-----------------G- 92 (722)
T ss_pred ecCCCCCCcEEEECCCCEEECHHHHHHHHHHhCCCcCCCCCCHHHHHHHHHHHHHHhhccc-----------------H-
Confidence 368999999999 789999999999999999998878999999999999999998754210 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHHHHHH-hhcCC-CCccchHHHHHHHHHhcChh-----
Q 030554 88 RDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQLYAAV-NRFNL-DMTQFPLLLRLHEAYSKLPA----- 160 (175)
Q Consensus 88 ~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l~~~~-~~~~~-~~~~~p~l~~~~~~~~~~~~----- 160 (175)
..+...++.||.+|+. ++||+|+++|+||+++++.+.... ..... ....+|+|.+|+++|.++|+
T Consensus 93 ------~~l~~~L~~LE~~L~~--rtYLvGd~lTLADIaL~~~L~~~~~~~~~~~~~~~yPnL~RW~erI~arPs~~~~~ 164 (722)
T PLN02907 93 ------SEFENACEYVDGYLAS--RTFLVGYSLTIADIAIWSGLAGSGQRWESLRKSKKYQNLVRWFNSISAEYSDILNE 164 (722)
T ss_pred ------HHHHHHHHHHHHHhcc--CCeecCCCCCHHHHHHHHHHHhhhhhhhcccccccCHHHHHHHHHHHhCCCcchhh
Confidence 1345678999999986 589999999999999999886541 11122 24679999999999999999
Q ss_pred -hhhhCCcC
Q 030554 161 -FQNAAPEK 168 (175)
Q Consensus 161 -~~~~~~~~ 168 (175)
.+.+...+
T Consensus 165 ~~~a~~~~~ 173 (722)
T PLN02907 165 VTAAYVGKR 173 (722)
T ss_pred HHHHHHHhh
Confidence 55555433
No 21
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=99.86 E-value=2e-21 Score=138.41 Aligned_cols=146 Identities=20% Similarity=0.205 Sum_probs=100.6
Q ss_pred hhhhCCCCccCeee-cCCcccccHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHhccccchhHHHHHH--------
Q 030554 7 FLKINPIGYVPALV-DGDFVVSDSFAILMYLEEKYPQPPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVK-------- 77 (175)
Q Consensus 7 ~~~~nP~~~vP~L~-~~g~~l~es~~I~~yL~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~-------- 77 (175)
..++||.|+||+|+ +||..++||.+|++||+++||.+.+.+ ..++.+++|+.++...+...+...+..
T Consensus 38 ~~~~np~g~vP~l~~~~g~~l~es~~I~~yL~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (209)
T TIGR02182 38 PIRMIGAKQVPILQKDDGRAMPESLDIVAYFDKLDGEPLLTG---KVSPEIEAWLRKVTGYANKLLLPRFAKSDLPEFAT 114 (209)
T ss_pred HHHhcCCCCcceEEeeCCeEeccHHHHHHHHHHhCCCccCCC---CChHHHHHHHHHHHHHhhhhhccccccCCCcccCC
Confidence 47999999999998 899999999999999999998644433 244556666665444443222111100
Q ss_pred -----Hhh-hc---cCch----HHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHHHHHHhhcCCCCcc
Q 030554 78 -----YIE-EK---AGAD----ERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQLYAAVNRFNLDMTQ 144 (175)
Q Consensus 78 -----~~~-~~---~~~~----~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l~~~~~~~~~~~~~ 144 (175)
... .. .... ...+.....+++.|+.||++|++ ++|+.| ++|+||+++++++.++ ...+. . .
T Consensus 115 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~g-~~TiADi~l~~~l~~~-~~~~~-~-~ 188 (209)
T TIGR02182 115 QSARKYFTDKKEASAGNFSALLNHTPGLLEEINADLEELDKLIDG--PNAVNG-ELSEDDILVFPLLRNL-TLVAG-I-N 188 (209)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHccCHHHHHHHHHHHHHHHHHHhC--ccccCC-CCCHHHHHHHHHhcCe-eeecC-C-C
Confidence 000 00 0000 00134567789999999999986 599855 6999999999999887 43321 1 2
Q ss_pred ch-HHHHHHHHHhcChhh
Q 030554 145 FP-LLLRLHEAYSKLPAF 161 (175)
Q Consensus 145 ~p-~l~~~~~~~~~~~~~ 161 (175)
+| +|.+|++||++++++
T Consensus 189 ~p~~l~~w~~Ri~ar~~~ 206 (209)
T TIGR02182 189 WPSRVADYLDNMSKKSKV 206 (209)
T ss_pred CChHHHHHHHHHHHHhCC
Confidence 56 999999999998875
No 22
>KOG4420 consensus Uncharacterized conserved protein (Ganglioside-induced differentiation associated protein 1, GDAP1) [Function unknown]
Probab=99.86 E-value=1.5e-20 Score=132.36 Aligned_cols=166 Identities=20% Similarity=0.240 Sum_probs=114.6
Q ss_pred CCcchhhhhCCCCccCeeecCCcccccHHHHHHHHHHhCC-CCCCCCc-cHHHHHHHHHHHHHHhc--------------
Q 030554 2 FGLVDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKYP-QPPLLPS-DLKRKAINYQAANIVSS-------------- 65 (175)
Q Consensus 2 ~~~~~~~~~nP~~~vP~L~~~g~~l~es~~I~~yL~~~~~-~~~l~p~-~~~~~a~~~~~~~~~~~-------------- 65 (175)
|..+||.++||.|.||||+++..+|+|+..|++|++++|- ++.|-|. +.....++.........
T Consensus 64 h~epwFmrlNp~gevPVl~~g~~II~d~tqIIdYvErtf~ger~l~pe~~S~~~d~~l~~e~~l~~lpm~~~t~g~~lh~ 143 (325)
T KOG4420|consen 64 HKEPWFMRLNPGGEVPVLIHGDNIISDYTQIIDYVERTFTGERVLMPEVGSLQHDRVLQYEELLDALPMDAYTHGCILHP 143 (325)
T ss_pred ccCchheecCCCCCCceEecCCeecccHHHHHHHHHHhhcccccccccccccccHHHHHHHHHHHhcCcchhhccccccc
Confidence 5788999999999999999999999999999999999985 3556665 22222222211111110
Q ss_pred c-----ccchhH---HHHHH-------Hhhhc---------------------cCchHHHHHHHHHHHHHHHHHHHHHhh
Q 030554 66 S-----IQPLQN---LAVVK-------YIEEK---------------------AGADERDIWAKTHIGKGFAALEKLLKD 109 (175)
Q Consensus 66 ~-----~~~~~~---~~~~~-------~~~~~---------------------~~~~~~~~~~~~~~~~~l~~le~~L~~ 109 (175)
. ..+... ....+ ..... -......+.....+...|..+|+.|..
T Consensus 144 eL~~~s~iP~~~~iR~~~~k~~~~v~~l~~~e~pdla~ay~akqkkl~~kl~~hdd~s~lkkild~l~~~Ld~VEteLe~ 223 (325)
T KOG4420|consen 144 ELTTDSMIPKYAEIRRHLAKATTDVMKLDHEEEPDLAEAYLAKQKKLMAKLLEHDDVSYLKKILDELAMVLDQVETELEK 223 (325)
T ss_pred hhhccccCcccHHHHHHHHHHHHHHHHHHhhcCchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 0 001100 00000 00000 002234566667778888888888876
Q ss_pred c--CCCcccCCCccHHHHHhHHHHHHHHhhcCCC---C--ccchHHHHHHHHHhcChhhhhhCCcC
Q 030554 110 Y--AGKYATGDEVFLADLYLAPQLYAAVNRFNLD---M--TQFPLLLRLHEAYSKLPAFQNAAPEK 168 (175)
Q Consensus 110 ~--~~~~l~G~~~t~aD~~~~~~l~~~~~~~~~~---~--~~~p~l~~~~~~~~~~~~~~~~~~~~ 168 (175)
+ -..||+|+.+|+||+.+.+.|.++ ...|++ + ...|+|..|++|++.|++|+++++..
T Consensus 224 r~~~~~wL~G~efslADVsLg~~LhRL-~~Lg~e~~yw~~gsrpnle~Yf~rvrrR~sf~kvlg~~ 288 (325)
T KOG4420|consen 224 RKLCELWLCGCEFSLADVSLGATLHRL-KFLGLEKKYWEDGSRPNLESYFERVRRRFSFRKVLGDI 288 (325)
T ss_pred ccccceeeccccchHHHHHHHHHHHHH-HHcccHHHhcccCCCccHHHHHHHHHhhhHHHHhhhhH
Confidence 3 358999999999999999999999 666754 3 37899999999999999999998653
No 23
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=99.79 E-value=4.7e-18 Score=110.97 Aligned_cols=117 Identities=44% Similarity=0.771 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHHhccccchhHHHHHHHhhhc-cC-chHHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhH
Q 030554 51 KRKAINYQAANIVSSSIQPLQNLAVVKYIEEK-AG-ADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLA 128 (175)
Q Consensus 51 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~ 128 (175)
.+++++++|+.++.+.+.+.+...+....... .. .....+...+.+.+.|..||+.|++++++||+|+++|+||++++
T Consensus 2 ~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~ 81 (121)
T cd03191 2 KKRARVRALALIIACDIHPLNNLRVLKYLTEELGLDEEAKNAWYRHWIARGFAALEKLLAQTAGKFCFGDEPTLADICLV 81 (121)
T ss_pred hhHHHHHHHHHHHHccCCccccHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeecCCcCCHHHHHHH
Confidence 57899999999999888765433333222111 11 12334445567899999999999853357999999999999999
Q ss_pred HHHHHHHhhcCCCCccchHHHHHHHHHhcChhhhhhCCcC
Q 030554 129 PQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAAPEK 168 (175)
Q Consensus 129 ~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~ 168 (175)
+.+.++ ...+..++.+|+|.+|+++|.++|+|+++.+.+
T Consensus 82 ~~~~~~-~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~ 120 (121)
T cd03191 82 PQVYNA-RRFGVDLSPYPTIARINEACLELPAFQAAHPDN 120 (121)
T ss_pred HHHHHH-HHhCCCcccCcHHHHHHHHHHhChhHHHhCcCc
Confidence 999887 556666788999999999999999999998765
No 24
>KOG1422 consensus Intracellular Cl- channel CLIC, contains GST domain [Inorganic ion transport and metabolism]
Probab=99.72 E-value=9e-17 Score=110.26 Aligned_cols=154 Identities=26% Similarity=0.276 Sum_probs=111.9
Q ss_pred CCcchhhhhCCCCccCeeecCCcccccHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHhccccchhHHHHHHHhhh
Q 030554 2 FGLVDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQPPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEE 81 (175)
Q Consensus 2 ~~~~~~~~~nP~~~vP~L~~~g~~l~es~~I~~yL~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (175)
-++++|+++.|.+++|+|..|+..++||..|-++|+++++.+.+.--.+.|.+.+ ..+.+.. +..++..
T Consensus 47 ~kp~~f~~~sp~~~~P~l~~d~~~~tDs~~Ie~~Lee~l~~p~~~~~~~~E~asa------g~diF~k-----F~~fi~k 115 (221)
T KOG1422|consen 47 RKPEWFLDISPGGKPPVLKFDEKWVTDSDKIEEFLEEKLPPPKLPTLAPPESASA------GSDIFAK-----FSAFIKK 115 (221)
T ss_pred CCcHHHHhhCCCCCCCeEEeCCceeccHHHHHHHHHHhcCCCCCcccCCHHHHhh------HHHHHHH-----HHHHHhC
Confidence 3788999999999999999999999999999999999998654322123333221 1111111 1111111
Q ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHhh-cCCCcccCCCccHHHHHhHHHHHHHHhhc----CCCC-ccchHHHHHHHHH
Q 030554 82 KAGADERDIWAKTHIGKGFAALEKLLKD-YAGKYATGDEVFLADLYLAPQLYAAVNRF----NLDM-TQFPLLLRLHEAY 155 (175)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~le~~L~~-~~~~~l~G~~~t~aD~~~~~~l~~~~~~~----~~~~-~~~p~l~~~~~~~ 155 (175)
. .++..+.....+-..|+.|++.|.. +.++||.||++|.||+.+.+-|+.+.... ++++ ++++++.+|++.+
T Consensus 116 s--k~~~n~~~e~~Ll~~L~~Ld~yL~sp~~~~Fl~Gd~lt~aDcsLlPKL~~i~va~k~yk~~~IP~~lt~V~rYl~~~ 193 (221)
T KOG1422|consen 116 S--KDAANDGLEKALLKELEKLDDYLKSPSRRKFLDGDKLTLADCSLLPKLHHIKVAAKHYKNFEIPASLTGVWRYLKNA 193 (221)
T ss_pred c--hhhccchHHHHHHHHHHHHHHHhcCccCCccccCCeeeeehhhhchhHHHHHHHHHHhcCCCCchhhhHHHHHHHHH
Confidence 1 2233444556677888999999986 56899999999999999999999884322 2343 4789999999999
Q ss_pred hcChhhhhhCCcC
Q 030554 156 SKLPAFQNAAPEK 168 (175)
Q Consensus 156 ~~~~~~~~~~~~~ 168 (175)
.++.+|..+++..
T Consensus 194 ya~d~F~~tcp~d 206 (221)
T KOG1422|consen 194 YARDEFTNTCPAD 206 (221)
T ss_pred HhHHHhhcCCchH
Confidence 9999999988764
No 25
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=99.72 E-value=4.8e-17 Score=104.93 Aligned_cols=111 Identities=25% Similarity=0.272 Sum_probs=86.6
Q ss_pred HHHHHHHHHHHHhccccchhHHHHHHHh--hhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHH
Q 030554 52 RKAINYQAANIVSSSIQPLQNLAVVKYI--EEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAP 129 (175)
Q Consensus 52 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~ 129 (175)
+++++++|+.+..+.+.+.+........ ......+...+.....+.+.+..||+.|++ ++||+|+++|+|||++++
T Consensus 2 ~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~--~~~l~G~~~t~aDi~~~~ 79 (114)
T cd03188 2 ERARLLEWLNFLSSELHKAFGPLFYPARWATDEAAQEEVKAAARERLAARLAYLDAQLAG--GPYLLGDRFSVADAYLFV 79 (114)
T ss_pred cHHHHHHHHHHHhhhhchhhhhcccccccccChhhHHHHHHHHHHHHHHHHHHHHHHhcC--CCeeeCCCcchHHHHHHH
Confidence 5789999999998888776543332211 001112345677788899999999999985 589999999999999999
Q ss_pred HHHHHHhhcCCCCccchHHHHHHHHHhcChhhhhhC
Q 030554 130 QLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAA 165 (175)
Q Consensus 130 ~l~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~ 165 (175)
.+.++ ...+...+.+|+|.+|+++|.++|++++++
T Consensus 80 ~~~~~-~~~~~~~~~~p~l~~w~~~~~~~p~~k~~~ 114 (114)
T cd03188 80 VLRWA-PGVGLDLSDWPNLAAYLARVAARPAVQAAL 114 (114)
T ss_pred HHHHH-hhcCCChhhChHHHHHHHHHHhCHHhHhhC
Confidence 99887 445555678999999999999999999864
No 26
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.71 E-value=1.5e-16 Score=102.93 Aligned_cols=111 Identities=16% Similarity=0.098 Sum_probs=87.1
Q ss_pred cHHHHHHHHHHHHHHhccccchhHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhH
Q 030554 49 DLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLA 128 (175)
Q Consensus 49 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~ 128 (175)
++..++++++|+.+....+.+.+.......... .+..+.....+.+.+..||+.|++ ++|++|+++|+||++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~l~~le~~L~~--~~yl~Gd~~tlADi~l~ 76 (115)
T cd03196 3 DPAALKEMLALIAENDNEFKHHLDRYKYADRYP----EESEEEYRQQAEAFLKDLEARLQQ--HSYLLGDKPSLADWAIF 76 (115)
T ss_pred chHHHHHHHHHHHHcchhhHHHHHhccchhhcC----cccHHHHHHHHHHHHHHHHHHHcc--CCccCCCCccHHHHHHH
Confidence 678999999999999988887665433221111 123667788999999999999986 58999999999999999
Q ss_pred HHHHHHHhhc--CCCCccchHHHHHHHHHhcChhhhhhC
Q 030554 129 PQLYAAVNRF--NLDMTQFPLLLRLHEAYSKLPAFQNAA 165 (175)
Q Consensus 129 ~~l~~~~~~~--~~~~~~~p~l~~~~~~~~~~~~~~~~~ 165 (175)
+.+.++.... +.....+|+|.+|+++|.++|+|++++
T Consensus 77 ~~l~~~~~~~~~~~~~~~~P~L~~w~~r~~~rpa~~~~~ 115 (115)
T cd03196 77 PFVRQFAHVDPKWFDQSPYPRLRRWLNGFLASPLFSKIM 115 (115)
T ss_pred HHHHHHHHhhhcccCcccCHHHHHHHHHHHcChHHHhhC
Confidence 9887763211 233578999999999999999999864
No 27
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.71 E-value=2.6e-16 Score=100.52 Aligned_cols=105 Identities=18% Similarity=0.195 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHhccccchhHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHH
Q 030554 51 KRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQ 130 (175)
Q Consensus 51 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~ 130 (175)
.++++.+.|+.++...+.+.+..... . .++..+.....+.+.|..||+.|++ ++|++|+++|+|||+++++
T Consensus 2 ~~ra~~r~w~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~G~~~t~aDi~~~~~ 72 (107)
T cd03186 2 VARARSRLLMHRIEQDWYPLVDTIEK----G---RKKEAEKARKELRESLLALAPVFAH--KPYFMSEEFSLVDCALAPL 72 (107)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHh----C---cHHHHHHHHHHHHHHHHHHHHHHcC--CCcccCCCCcHHHHHHHHH
Confidence 57899999999998877665532221 1 1344567788899999999999985 6999999999999999999
Q ss_pred HHHHHhhcCCCC-ccchHHHHHHHHHhcChhhhhhC
Q 030554 131 LYAAVNRFNLDM-TQFPLLLRLHEAYSKLPAFQNAA 165 (175)
Q Consensus 131 l~~~~~~~~~~~-~~~p~l~~~~~~~~~~~~~~~~~ 165 (175)
+.++ ...+..+ ..+|+|.+|+++|.++|++++++
T Consensus 73 ~~~~-~~~~~~~~~~~p~l~~w~~~~~~rpa~~~~~ 107 (107)
T cd03186 73 LWRL-PALGIELPKQAKPLKDYMERVFARDSFQKSL 107 (107)
T ss_pred HHHH-HHcCCCCcccchHHHHHHHHHHCCHHHHHhC
Confidence 8665 4455433 47999999999999999999763
No 28
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=99.71 E-value=1.6e-16 Score=102.45 Aligned_cols=110 Identities=18% Similarity=0.194 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHHhccccchhHHH-HHHHhhhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHH
Q 030554 52 RKAINYQAANIVSSSIQPLQNLA-VVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQ 130 (175)
Q Consensus 52 ~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~ 130 (175)
+++++++|+.+....+.+.+... ....... ...+...+....++.+.+..+|+.|++ ++|++|+++|+||++++++
T Consensus 1 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~G~~~t~aDi~l~~~ 77 (113)
T cd03178 1 ERYEVLQWLFFQMGGLGPMFGQAGHFSRYAP-EKIPYAIERYTNEAKRLYGVLDKRLAG--RDYLAGDEYSIADIAIFPW 77 (113)
T ss_pred ChHHHHHHHHHHHccCCCcchHHHHHHHhCC-CCChHHHHHHHHHHHHHHHHHHHHHcc--CCcccCCCCCeeeeeHHHH
Confidence 47889999999998888765432 2222222 223456677889999999999999975 5899999999999999999
Q ss_pred HHHHHhhcCCC-CccchHHHHHHHHHhcChhhhhhC
Q 030554 131 LYAAVNRFNLD-MTQFPLLLRLHEAYSKLPAFQNAA 165 (175)
Q Consensus 131 l~~~~~~~~~~-~~~~p~l~~~~~~~~~~~~~~~~~ 165 (175)
+.+. ...+.. ...+|++.+|+++|.++|++++++
T Consensus 78 ~~~~-~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~ 112 (113)
T cd03178 78 VRRL-EWIGIDDLDDFPNVKRWLDRIAARPAVQRGL 112 (113)
T ss_pred HHHH-HhccccchhhchHHHHHHHHHhhCHHHHHhc
Confidence 9887 444544 567999999999999999999875
No 29
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=99.69 E-value=4.4e-16 Score=103.74 Aligned_cols=116 Identities=16% Similarity=0.224 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHhccccchhHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHH
Q 030554 52 RKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQL 131 (175)
Q Consensus 52 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l 131 (175)
+.+.+++.++.+.+.....+...+. ................+.+.|..||+.|.+++++|++|+++|+||+++++.+
T Consensus 3 e~a~iD~i~~~v~D~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~lE~~L~~~~~~~l~G~~~T~ADi~l~~~l 79 (137)
T cd03208 3 ERALIDMYVEGTADLMEMILMLPFL---PPEEKEAKLALIKEKAKNRYFPVFEKVLKSHGQDFLVGNKLSRADIHLLEAI 79 (137)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccC---ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeCCCCCHHHHHHHHHH
Confidence 5677788877776655544322211 1111011123444456789999999999854468999999999999999999
Q ss_pred HHHHhhcCCCCccchHHHHHHHHHhcChhhhhhCCcCCC
Q 030554 132 YAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAAPEKQP 170 (175)
Q Consensus 132 ~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~ 170 (175)
.++.......++.+|+|.+|+++|.++|++++++..+..
T Consensus 80 ~~~~~~~~~~l~~~P~l~~~~~rv~~~P~vk~~~~~~~~ 118 (137)
T cd03208 80 LMVEELDPSLLSDFPLLQAFKTRISNLPTIKKFLQPGSP 118 (137)
T ss_pred HHHHHhchhhhccChHHHHHHHHHHcCHHHHHHHhcCCC
Confidence 987332333467899999999999999999999987654
No 30
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=99.69 E-value=6.6e-16 Score=100.46 Aligned_cols=110 Identities=21% Similarity=0.194 Sum_probs=84.6
Q ss_pred CccHHHHHHHHHHHHHHhccccchhHHH-HHHHhhhc-------cCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccCC
Q 030554 47 PSDLKRKAINYQAANIVSSSIQPLQNLA-VVKYIEEK-------AGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGD 118 (175)
Q Consensus 47 p~~~~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~ 118 (175)
|.++.+++++++|+.+....+.+.+... +....... .......+.....+.+.|+.||+.|++ ++|++|+
T Consensus 2 ~~~~~~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~Gd 79 (119)
T cd03189 2 PPDTAEYADYLYWLHFAEGSLMPPLLLKLVLSRIGSAPPPIANKIADKVLAGFINPELKKHLDFLEDRLAK--KGYFVGD 79 (119)
T ss_pred CCCHHHHHHHHHHHHHHhHhhhHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHhHHHHHHHHHHHHHHcc--CCCCCCC
Confidence 5578899999999999988887765422 22221110 012345556677899999999999986 5899999
Q ss_pred CccHHHHHhHHHHHHHHhhcCCCCccchHHHHHHHHHhcCh
Q 030554 119 EVFLADLYLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLP 159 (175)
Q Consensus 119 ~~t~aD~~~~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~~ 159 (175)
++|+||+++++.+.++ ...+...+.+|+|.+|+++|.++|
T Consensus 80 ~~t~ADi~l~~~~~~~-~~~~~~~~~~p~l~~w~~~~~~~p 119 (119)
T cd03189 80 KLTAADIMMSFPLEAA-LARGPLLEKYPNIAAYLERIEARP 119 (119)
T ss_pred CCCHHHHHHHHHHHHH-HHcCcccccCchHHHHHHHHhcCC
Confidence 9999999999999887 444445678999999999999986
No 31
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=99.68 E-value=2.3e-16 Score=102.57 Aligned_cols=112 Identities=20% Similarity=0.258 Sum_probs=85.3
Q ss_pred HHHHHHHHHHHHhccccchhHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHH
Q 030554 52 RKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQL 131 (175)
Q Consensus 52 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l 131 (175)
+++++++|+.+....+.+.+...+....... ....+.....+.+.|..||+.|++ ++|++|+++|+||+++++++
T Consensus 2 ~~a~~~~wl~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~le~~L~~--~~~l~G~~~s~aDi~l~~~~ 76 (118)
T cd03177 2 KRAIVNQRLHFDSGTLYQRLRDYYYPILFGG---AEPPEEKLDKLEEALDFLETFLEG--SDYVAGDQLTIADLSLVATV 76 (118)
T ss_pred hHHHHHHHHHhhhchHHHHHHHHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHcc--CCeeCCCCcCHHHHHHHHHH
Confidence 5788999999987777665543332221111 133455677899999999999975 48999999999999999999
Q ss_pred HHHHhhcCCCCccchHHHHHHHHHhcChhhhhhCCcC
Q 030554 132 YAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAAPEK 168 (175)
Q Consensus 132 ~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~ 168 (175)
.++....+.....+|+|.+|+++|.++|++++.....
T Consensus 77 ~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~ 113 (118)
T cd03177 77 STLEALLPLDLSKYPNVRAWLERLKALPPYEEANGKG 113 (118)
T ss_pred HHHHHhcCCChhhCchHHHHHHHHHcccchHHHHHHH
Confidence 9883325555678999999999999999999876443
No 32
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=99.68 E-value=7.8e-16 Score=100.64 Aligned_cols=115 Identities=17% Similarity=0.238 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHhccccchhHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHH
Q 030554 52 RKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQL 131 (175)
Q Consensus 52 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l 131 (175)
+++++++|+.++...+.+.+...+..............+.....+.+.|+.||+.|+. ++|++|+++|+||+++++++
T Consensus 1 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~--~~~l~G~~~siaDi~l~~~~ 78 (123)
T cd03181 1 EEAQVLQWVSFANTELLPAVAAWFLPLLGIAPYNKKSVEAALEELDRVLGVLEERLLK--RTYLVGERLTLADIFVAGAL 78 (123)
T ss_pred ChHHHHHHHHHHHhhhHHHHHHHHHHHcCccCCCHHHHHHHHHHHHHHHHHHHHHHcc--CceeccCCccHHHHHHHHHH
Confidence 3678999999998888776654443332222223456778888999999999999986 58999999999999999999
Q ss_pred HHHHhhcCCC---CccchHHHHHHHHHhcChhhhhhCCcCC
Q 030554 132 YAAVNRFNLD---MTQFPLLLRLHEAYSKLPAFQNAAPEKQ 169 (175)
Q Consensus 132 ~~~~~~~~~~---~~~~p~l~~~~~~~~~~~~~~~~~~~~~ 169 (175)
.++ ...... .+.+|++.+|++++.++|+|++++.+.+
T Consensus 79 ~~~-~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~~ 118 (123)
T cd03181 79 LLG-FTYVFDKEWRAKYPNVTRWFNTVVNQPIFKAVFGEVK 118 (123)
T ss_pred HHH-HHHHcCHHHHHhChHHHHHHHHHHcCHHHHHHcCCCC
Confidence 887 322222 3578999999999999999999987653
No 33
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=99.68 E-value=4.9e-16 Score=101.89 Aligned_cols=107 Identities=18% Similarity=0.204 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHhccccchhHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHH
Q 030554 52 RKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQL 131 (175)
Q Consensus 52 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l 131 (175)
+||+.+.|+++++..+....... .. ++..+...+.+.+.|..||+.|++.+++|++|+++|+||+++++++
T Consensus 2 ~ra~~r~~~~~~~~~~~~~~~~~-----~~----~~~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~t~aDi~~~~~~ 72 (124)
T cd03184 2 EKAQQKLLLERFSKVVSAFYKLL-----GA----PSDREEKKAELRSALENLEEELTKRGTPFFGGDSPGMVDYMIWPWF 72 (124)
T ss_pred hHHHHHHHHHHHhhhhHHHHHHH-----hc----cccchhhHHHHHHHHHHHHHHHHhcCCCCcCCCCccHHHHHhhHHH
Confidence 48889999999875444433211 11 2344567788999999999999864469999999999999999999
Q ss_pred HHHHhhcC------CCCccchHHHHHHHHHhcChhhhhhCCcC
Q 030554 132 YAAVNRFN------LDMTQFPLLLRLHEAYSKLPAFQNAAPEK 168 (175)
Q Consensus 132 ~~~~~~~~------~~~~~~p~l~~~~~~~~~~~~~~~~~~~~ 168 (175)
.++ ...+ ...+.+|+|.+|+++|.++|+++.++..+
T Consensus 73 ~~~-~~~~~~~~~~~~~~~~p~l~~w~~r~~~~p~v~~~~~~~ 114 (124)
T cd03184 73 ERL-EALKLLLGYEFPLDRFPKLKKWMDAMKEDPAVQAFYTDT 114 (124)
T ss_pred HHH-HHHHhhccccCCcccChHHHHHHHHhccChHHHHHhCCH
Confidence 876 3222 34578999999999999999999998765
No 34
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=99.67 E-value=1e-15 Score=100.65 Aligned_cols=111 Identities=17% Similarity=0.122 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHhccccchhHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHHHHHhhc-CCCcccCCCccHHHHHhHHH
Q 030554 52 RKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDY-AGKYATGDEVFLADLYLAPQ 130 (175)
Q Consensus 52 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~-~~~~l~G~~~t~aD~~~~~~ 130 (175)
+.+.++..++.+.+.........+.. .....+.....+.+.|..||+.|+++ +++|++|+++|+||++++++
T Consensus 3 e~~~vd~~~~~~~d~~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~l~G~~~T~ADi~l~~~ 75 (126)
T cd03210 3 EAALIDMVNDGVEDLRLKYVRMIYQN-------YEAGKDDYIKDLPEQLKPFEKLLSKNNGKGFIVGDKISFADYNLFDL 75 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCc-------HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCccHHHHHHHHH
Confidence 56677777776665443332211111 12234556677899999999999864 46899999999999999999
Q ss_pred HHHHHhhcCCCCccchHHHHHHHHHhcChhhhhhCCcCC
Q 030554 131 LYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAAPEKQ 169 (175)
Q Consensus 131 l~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~ 169 (175)
+.++....+..++.+|+|.+|+++|.++|++++++..+.
T Consensus 76 ~~~~~~~~~~~~~~~P~l~~~~~rv~~~p~v~~~~~~~~ 114 (126)
T cd03210 76 LDIHLVLAPGCLDAFPLLKAFVERLSARPKLKAYLESDA 114 (126)
T ss_pred HHHHHHhChHhhhcChHHHHHHHHHHhCcHHHHHHhCcC
Confidence 988832223336789999999999999999999987663
No 35
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.66 E-value=2e-15 Score=96.66 Aligned_cols=107 Identities=21% Similarity=0.202 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHHhccccchhHHHHHHHhh--hccCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHH
Q 030554 52 RKAINYQAANIVSSSIQPLQNLAVVKYIE--EKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAP 129 (175)
Q Consensus 52 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~ 129 (175)
+++++++|+.+..+.+.+.+...+..... .........+.....+.+.|+.||+.|++ ++|++|+++|+||+++++
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lE~~L~~--~~~l~g~~~t~aDi~~~~ 79 (110)
T cd03180 2 ARARADRWMDWQTSTLNPAFRYAFWGLVRTPPEQRDPAAIAASLAAWAKLMAILDAQLAG--RPYLAGDRFTLADIPLGC 79 (110)
T ss_pred chhHHHHHHHHHHhhcChHHHHHHHHHHcCCcccCCHHHHHHHHHHHHHHHHHHHHHhCC--CCcccCCCCCHHHHHHHH
Confidence 47889999999988888776544332221 11113345667888999999999999986 589999999999999999
Q ss_pred HHHHHHhhcCCCCccchHHHHHHHHHhcChhh
Q 030554 130 QLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAF 161 (175)
Q Consensus 130 ~l~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~ 161 (175)
++... ...+.....+|+|.+|+++|.++|+|
T Consensus 80 ~~~~~-~~~~~~~~~~p~l~~~~~~~~~~p~~ 110 (110)
T cd03180 80 SAYRW-FELPIERPPLPHLERWYARLRARPAF 110 (110)
T ss_pred HHHHH-HHcccccccCchHHHHHHHHHhCCCC
Confidence 98544 23344467899999999999999975
No 36
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=99.66 E-value=1.3e-15 Score=98.76 Aligned_cols=112 Identities=21% Similarity=0.194 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHhccccchhHHHHH-HHhh---hccCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHh
Q 030554 52 RKAINYQAANIVSSSIQPLQNLAVV-KYIE---EKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYL 127 (175)
Q Consensus 52 ~~a~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~ 127 (175)
+++++.+|+.+....+.+.+..... .... +........+.....+.+.++.||+.|++ ++|++|+++|+||+++
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~G~~~t~aDi~l 79 (118)
T cd03187 2 ERAIVEQWLEVESHQFDPPASALAFELVFKPMLGLPTDEAVVEENEEKLKKVLDVYEARLSK--SKYLAGDSFTLADLSH 79 (118)
T ss_pred chHHHHHHHHHHHhhcchhHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHHccc--CcccCCCCccHHHHHH
Confidence 5788899999988777665543221 1111 11223455666788999999999999986 5999999999999999
Q ss_pred HHHHHHHHhh-cCCCCccchHHHHHHHHHhcChhhhhhC
Q 030554 128 APQLYAAVNR-FNLDMTQFPLLLRLHEAYSKLPAFQNAA 165 (175)
Q Consensus 128 ~~~l~~~~~~-~~~~~~~~p~l~~~~~~~~~~~~~~~~~ 165 (175)
++++.++... .+...+.+|+|.+|+++|.++|++++++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 118 (118)
T cd03187 80 LPYLQYLMATPFAKLFDSRPHVKAWWEDISARPAWKKVL 118 (118)
T ss_pred HHHHHHHHHccchhhhhcCchHHHHHHHHHhCHHHHhhC
Confidence 9999887321 1122467999999999999999999864
No 37
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=99.66 E-value=1.7e-15 Score=98.18 Aligned_cols=110 Identities=15% Similarity=0.046 Sum_probs=85.4
Q ss_pred cHHHHHHHHHHHHHHhccccchhHHHHHHHh---h---hccCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccH
Q 030554 49 DLKRKAINYQAANIVSSSIQPLQNLAVVKYI---E---EKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFL 122 (175)
Q Consensus 49 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ 122 (175)
++.+++++++|+.++...+...+...+.... . .........+....++.+.|..||+.|++ ++|++|+++|+
T Consensus 1 d~~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~--~~~l~gd~~t~ 78 (117)
T cd03182 1 TPLERAQIEMWQRRAELQGLYPIGQAFRHATPGLKPPDREEQVPEWGERSKARAADFLAYLDTRLAG--SPYVAGDRFTI 78 (117)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCccccccCHHHHHHHHHHHHHHHHHHHHHhcC--CCcccCCCCCH
Confidence 4678999999999987777665443332211 1 11223456788889999999999999986 48999999999
Q ss_pred HHHHhHHHHHHHHhhcCCCC-ccchHHHHHHHHHhcChhh
Q 030554 123 ADLYLAPQLYAAVNRFNLDM-TQFPLLLRLHEAYSKLPAF 161 (175)
Q Consensus 123 aD~~~~~~l~~~~~~~~~~~-~~~p~l~~~~~~~~~~~~~ 161 (175)
||+++++.+.++ ...+.++ ..+|+|.+|++++.++|++
T Consensus 79 aDi~l~~~~~~~-~~~~~~~~~~~p~l~~w~~~~~~~p~~ 117 (117)
T cd03182 79 ADITAFVGLDFA-KVVKLRVPEELTHLRAWYDRMAARPSA 117 (117)
T ss_pred HHHHHHHHhHHH-HhcCCCCccccHHHHHHHHHHHhccCC
Confidence 999999999887 5556554 5799999999999999974
No 38
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=99.66 E-value=1.6e-15 Score=99.58 Aligned_cols=110 Identities=19% Similarity=0.195 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHHhccccchhHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHH
Q 030554 51 KRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQ 130 (175)
Q Consensus 51 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~ 130 (175)
.++++.+.|+.+....+...+..... . .+...+.....+.+.+..||+.|+. ++|++|+++|+||++++++
T Consensus 2 ~~ra~~~~w~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~G~~~t~ADi~l~~~ 72 (126)
T cd03185 2 YERAVARFWAAFIDDKLFPAGRKVLA----A---KGEEREKAKEEALEALKVLEEELGG--KPFFGGDTIGYVDIALGSF 72 (126)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHc----c---chHHHHHHHHHHHHHHHHHHHHhcC--CCCCCCCCcchHHHHHHHH
Confidence 47899999999988777665533221 1 1345566788899999999999976 5999999999999999999
Q ss_pred HHHHHh---hcCCC---CccchHHHHHHHHHhcChhhhhhCCcCC
Q 030554 131 LYAAVN---RFNLD---MTQFPLLLRLHEAYSKLPAFQNAAPEKQ 169 (175)
Q Consensus 131 l~~~~~---~~~~~---~~~~p~l~~~~~~~~~~~~~~~~~~~~~ 169 (175)
+.++.. ..+.+ .+.+|++.+|+++|.++|+++++++..+
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~~ 117 (126)
T cd03185 73 LGWFRAYEEVGGVKLLDEEKTPLLAAWAERFLELEAVKEVLPDRD 117 (126)
T ss_pred HHHHHHHHHHcCccccCcccCchHHHHHHHHHhccHHHHhCCCHH
Confidence 988632 12322 4679999999999999999999987653
No 39
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.64 E-value=1.5e-15 Score=98.04 Aligned_cols=111 Identities=20% Similarity=0.081 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHHHHhccccchhHHHHHHH-hhhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhH
Q 030554 50 LKRKAINYQAANIVSSSIQPLQNLAVVKY-IEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLA 128 (175)
Q Consensus 50 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~ 128 (175)
+.++++.+.|+.++.+.+.+......... ... .......+.+...+.+.++.+|.+|.. +++||+| ++|+||++++
T Consensus 1 ~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~le~~l~~-~~~~l~G-~fSiAD~~l~ 77 (114)
T cd03195 1 PRQRARARQVQAWLRSDLLPIRVERSTEVVFAG-AKAEPLSEAAQAAAEKLIAVAEALLPP-GAANLFG-EWCIADTDLA 77 (114)
T ss_pred CHhhHHHHHHHHHHHhhHHHHHHhCCccceecC-CCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCcccC-CccHHHHHHH
Confidence 35789999999999998876522111011 111 111234466778888999999999973 4589999 5999999999
Q ss_pred HHHHHHHhhcCCCCccchHHHHHHHHHhcChhhhhhCC
Q 030554 129 PQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAAP 166 (175)
Q Consensus 129 ~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~ 166 (175)
+++.++ ...+.++. |++.+|++||.+||+|++++.
T Consensus 78 ~~~~~~-~~~g~~l~--p~l~ay~~r~~~rPa~~~~~~ 112 (114)
T cd03195 78 LMLNRL-VLNGDPVP--ERLRDYARRQWQRPSVQAWLA 112 (114)
T ss_pred HHHHHH-HHcCCCCC--HHHHHHHHHHHCCHHHHHHHh
Confidence 999999 77787764 999999999999999999874
No 40
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=99.64 E-value=3.1e-15 Score=97.63 Aligned_cols=110 Identities=13% Similarity=0.085 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHHhccccchhHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHH
Q 030554 52 RKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQL 131 (175)
Q Consensus 52 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l 131 (175)
+++++++.++.+.+.........+. . . .....+.....+.+.+..||+.|++ ++|++|+++|+||+++++++
T Consensus 2 e~~~id~~~~~~~d~~~~~~~~~~~----~-~-~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~G~~~T~aDi~l~~~~ 73 (121)
T cd03209 2 ERIRVDMLEQQAMDLRMGLARICYS----P-D-FEKLKPDYLAKLPDKLKLFSDFLGD--RPWFAGDKITYVDFLLYEAL 73 (121)
T ss_pred chHHHHHHHHHHHHHHHHHHHhhcC----c-c-hHHHHHHHHHHHHHHHHHHHHHhCC--CCCcCCCCccHHHHHHHHHH
Confidence 4677777777776655432222111 1 1 2345566778899999999999976 58999999999999999999
Q ss_pred HHHHhhcCCCCccchHHHHHHHHHhcChhhhhhCCcCC
Q 030554 132 YAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAAPEKQ 169 (175)
Q Consensus 132 ~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~ 169 (175)
.++.......++.+|+|.+|+++|.++|++++++.++.
T Consensus 74 ~~~~~~~~~~~~~~P~l~~~~~rv~~~p~vk~~~~~~~ 111 (121)
T cd03209 74 DQHRIFEPDCLDAFPNLKDFLERFEALPKISAYMKSDR 111 (121)
T ss_pred HHHHHhCccccccChHHHHHHHHHHHCHHHHHHHhccc
Confidence 88833222236789999999999999999999998773
No 41
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=99.63 E-value=5.5e-15 Score=99.08 Aligned_cols=109 Identities=18% Similarity=0.126 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHHHhccccchhHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHH
Q 030554 51 KRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQ 130 (175)
Q Consensus 51 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~ 130 (175)
..+++++.|++|..+.+.+.+.. ... ...++..+.....+.+.|+.||+.|++ ++|++|+++|+||++++++
T Consensus 3 ~~~a~i~~~~~~~~~~~~~~~~~----~~~--~~~~~~~~~~~~~l~~~l~~LE~~L~~--~~yl~Gd~~TlADi~l~~~ 74 (142)
T cd03190 3 ELRSEIDELNEWIYDNINNGVYK----AGF--ATTQEAYDEAVDELFEALDRLEELLSD--RRYLLGDRLTEADIRLFTT 74 (142)
T ss_pred hHHHHHHHHHHHHHHHHhhHHHH----Hhh--ccCHHHHHHHHHHHHHHHHHHHHHHcc--CCeeeCCCccHHHHHHHHH
Confidence 45788999999998877665422 111 123456677888999999999999986 5999999999999999999
Q ss_pred HHHHHhh----cC---CCCccchHHHHHHHHHhcChhhhhhCCc
Q 030554 131 LYAAVNR----FN---LDMTQFPLLLRLHEAYSKLPAFQNAAPE 167 (175)
Q Consensus 131 l~~~~~~----~~---~~~~~~p~l~~~~~~~~~~~~~~~~~~~ 167 (175)
+.++... .. ..++.||+|.+|+++|.++|++++++..
T Consensus 75 l~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~P~~k~~~~~ 118 (142)
T cd03190 75 LIRFDAVYVQHFKCNLKRIRDYPNLWNYLRRLYQNPGVAETTNF 118 (142)
T ss_pred HHHHHHHhhhhcccccchhhhCchHHHHHHHHhcCchHhhhcCH
Confidence 8765211 11 1245799999999999999999998764
No 42
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=99.62 E-value=6.5e-15 Score=96.75 Aligned_cols=111 Identities=16% Similarity=0.158 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHhccccchhHHHHHHH-----hhhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHh
Q 030554 53 KAINYQAANIVSSSIQPLQNLAVVKY-----IEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYL 127 (175)
Q Consensus 53 ~a~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~ 127 (175)
++++++|+.+....+.+.+....... .......+...+...+.+.+.++.+|+.|.+ +++|++|+++|+||+++
T Consensus 2 ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~-~~~~l~Gd~~t~ADi~l 80 (126)
T cd03183 2 RARVDEYLAWQHTNLRLGCAKYFWQKVLLPLLGGKPVSPEKVKKAEENLEESLDLLENYFLK-DKPFLAGDEISIADLSA 80 (126)
T ss_pred cccHHHHHHHHHhhhHhhHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHhc-CCCcccCCCCCHHHHHH
Confidence 56678888888776655433221111 1111223556777888999999999997543 25899999999999999
Q ss_pred HHHHHHHHhhcCCC-CccchHHHHHHHHHhc--ChhhhhhC
Q 030554 128 APQLYAAVNRFNLD-MTQFPLLLRLHEAYSK--LPAFQNAA 165 (175)
Q Consensus 128 ~~~l~~~~~~~~~~-~~~~p~l~~~~~~~~~--~~~~~~~~ 165 (175)
++.+.+. ...+.+ ...+|+|.+|+++|.+ +|+++++.
T Consensus 81 ~~~~~~~-~~~~~~~~~~~p~l~~w~~~~~~~~~p~~~~~~ 120 (126)
T cd03183 81 VCEIMQP-EAAGYDVFEGRPKLAAWRKRVKEAGNPLFDEAH 120 (126)
T ss_pred HHHHHHH-HhcCCcccccCchHHHHHHHHHHhcchhHHHHH
Confidence 9988777 455554 4789999999999999 99999865
No 43
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=99.60 E-value=1.5e-14 Score=95.04 Aligned_cols=83 Identities=23% Similarity=0.283 Sum_probs=69.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhh--------------cCCCcccCCCccHHHHHhHHHHHHHHhh----cCCCC-ccch
Q 030554 86 DERDIWAKTHIGKGFAALEKLLKD--------------YAGKYATGDEVFLADLYLAPQLYAAVNR----FNLDM-TQFP 146 (175)
Q Consensus 86 ~~~~~~~~~~~~~~l~~le~~L~~--------------~~~~~l~G~~~t~aD~~~~~~l~~~~~~----~~~~~-~~~p 146 (175)
++..+...+.+...|+.||..|.+ .+++||+|+++|+|||++++.+.++... .++.+ ..+|
T Consensus 24 ~~~~e~~~~~l~~~L~~ld~~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTlADi~l~p~L~~~~~~~~~~~g~~i~~~~P 103 (134)
T cd03198 24 PALNENLEKGLLKALKKLDDYLNSPLPDEIDSAEDEGVSQRKFLDGDELTLADCNLLPKLHIVKVVAKKYRNFEIPADLT 103 (134)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHccCccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCccccCH
Confidence 456677788999999999999986 2368999999999999999999876321 24454 7899
Q ss_pred HHHHHHHHHhcChhhhhhCCcC
Q 030554 147 LLLRLHEAYSKLPAFQNAAPEK 168 (175)
Q Consensus 147 ~l~~~~~~~~~~~~~~~~~~~~ 168 (175)
+|.+|+++|.+||+|+++++..
T Consensus 104 ~L~aw~~ri~aRPsfk~t~~~~ 125 (134)
T cd03198 104 GLWRYLKNAYQREEFTNTCPAD 125 (134)
T ss_pred HHHHHHHHHHCCHHHHHHcCCH
Confidence 9999999999999999998754
No 44
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=99.59 E-value=2.3e-14 Score=93.35 Aligned_cols=106 Identities=16% Similarity=0.223 Sum_probs=73.5
Q ss_pred cHHHHHHHHHHHHHHhccccchhHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHHHHHhh-cCCCcccCCCccHHHHHh
Q 030554 49 DLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKD-YAGKYATGDEVFLADLYL 127 (175)
Q Consensus 49 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~-~~~~~l~G~~~t~aD~~~ 127 (175)
++.+|+.+++++.+. ..+... .+.....+.. ...+.+.++.||+.|++ .+++|++| ++|+||+++
T Consensus 1 d~~~ra~~~~~~~~~-~~~~~~---~~~~~~~~~~---------~~~~~~~l~~Le~~L~~~~~~~fl~G-~~tlADi~l 66 (120)
T cd03203 1 DPAKREFADELLAYT-DAFTKA---LYSSLIKGDP---------SAEAAAALDYIENALSKFDDGPFFLG-QFSLVDIAY 66 (120)
T ss_pred CHHHHHHHHHHHHHH-HHHHHH---HHHHHhcCCc---------hHHHHHHHHHHHHHHHhcCCCCCcCC-CccHHHHHH
Confidence 367899999999882 111111 1111121211 13446677888888863 13699999 999999999
Q ss_pred HHHHHHHHh----hcCCCC-ccchHHHHHHHHHhcChhhhhhCCcC
Q 030554 128 APQLYAAVN----RFNLDM-TQFPLLLRLHEAYSKLPAFQNAAPEK 168 (175)
Q Consensus 128 ~~~l~~~~~----~~~~~~-~~~p~l~~~~~~~~~~~~~~~~~~~~ 168 (175)
++++.++.. ..+.++ +.+|+|.+|+++|.++|+++++.+..
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~P~l~~W~~~~~~rp~~~~~~~~~ 112 (120)
T cd03203 67 VPFIERFQIFLSELFNYDITEGRPNLAAWIEEMNKIEAYTQTKQDP 112 (120)
T ss_pred HHHHHHHHHHHHHhcCccccccCcHHHHHHHHHhcchHHHhHcCCH
Confidence 999976621 234454 58999999999999999999998754
No 45
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=99.57 E-value=2.8e-14 Score=89.06 Aligned_cols=71 Identities=32% Similarity=0.432 Sum_probs=62.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHHHHHHhhcCCCC--ccchHHHHHHHHHhcCh
Q 030554 86 DERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQLYAAVNRFNLDM--TQFPLLLRLHEAYSKLP 159 (175)
Q Consensus 86 ~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l~~~~~~~~~~~--~~~p~l~~~~~~~~~~~ 159 (175)
++..+.....+.+.|..+|+.|.+ ++|++|+++|+||+++++++.++ ...+... +++|+|.+|+++|.++|
T Consensus 23 ~~~~~~~~~~~~~~l~~le~~l~~--~~~l~G~~~t~ADi~~~~~~~~~-~~~~~~~~~~~~P~l~~w~~~~~~~P 95 (95)
T PF00043_consen 23 EEMVEEARAKVPRYLEVLEKRLKG--GPYLVGDKLTIADIALFPMLDWL-ERLGPDFLFEKFPKLKKWYERMFARP 95 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT--SSSSSBSS-CHHHHHHHHHHHHH-HHHTTTTTHTTSHHHHHHHHHHHTSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcC--CCeeeccCCchhHHHHHHHHHHH-HHhCCCcccccCHHHHHHHHHHHcCC
Confidence 447788889999999999999995 79999999999999999999999 5555544 79999999999999997
No 46
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.55 E-value=1.9e-14 Score=91.22 Aligned_cols=76 Identities=26% Similarity=0.305 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHHHHHHhhcCCCCccchHHHHHHHHHhcChhhhhhCCc
Q 030554 88 RDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAAPE 167 (175)
Q Consensus 88 ~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~ 167 (175)
..+.....+.+.++.||+.|++ ++|++|+++|+||+++++++.+. ...+. .+.+|+|.+|+++|.++|+++++...
T Consensus 27 ~~~~~~~~~~~~l~~le~~l~~--~~~l~g~~~t~aDi~~~~~~~~~-~~~~~-~~~~p~l~~w~~~~~~~p~~~~~~~~ 102 (103)
T cd03207 27 ARMAGFGSYDDVLAALEQALAK--GPYLLGERFTAADVLVGSPLGWG-LQFGL-LPERPAFDAYIARITDRPAFQRAAAI 102 (103)
T ss_pred hhhhhhhhHHHHHHHHHHHHcc--CCcccCCccCHHHHHHHHHHHHH-HHcCC-CCCChHHHHHHHHHHcCHHHHHHhcc
Confidence 4555668899999999999986 58999999999999999999988 44443 46899999999999999999988753
No 47
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.54 E-value=5.3e-14 Score=88.73 Aligned_cols=71 Identities=23% Similarity=0.309 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHHHHHHhhcCCCCccchHHHHHHHHHhcChhh
Q 030554 88 RDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAF 161 (175)
Q Consensus 88 ~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~ 161 (175)
..+.....+.+.++.+|++|++ ++|++|+++|+||+++++++.+. ...+...+.+|+|.+|+++|.++|+|
T Consensus 30 ~~~~~~~~~~~~l~~le~~L~~--~~~l~G~~~t~aDi~~~~~~~~~-~~~~~~~~~~p~l~~~~~~~~~~p~~ 100 (100)
T cd03206 30 DKETAIARAHRLLRLLEEHLAG--RDWLAGDRPTIADVAVYPYVALA-PEGGVDLEDYPAIRRWLARIEALPGF 100 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHcc--CCccCCCCCCHHHHHHHHHHHHH-hccCCChhhCcHHHHHHHHHHhCcCC
Confidence 3456778899999999999986 58999999999999999998765 34455567899999999999999975
No 48
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=99.54 E-value=4.7e-14 Score=88.21 Aligned_cols=96 Identities=14% Similarity=0.059 Sum_probs=74.3
Q ss_pred HHHHHHhCCCCCCCCccHHHHHHHHHHHHHHhccccchhHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 030554 33 LMYLEEKYPQPPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAG 112 (175)
Q Consensus 33 ~~yL~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~ 112 (175)
++||++.- .++|.++.+.+.+++|++.....+.. .....+.+.+..+|+.|++ +
T Consensus 1 ~r~~~~~~---~~~~~~~~~~~~vd~~~d~~~~~l~~---------------------~~~~~~~~~l~~le~~L~~--~ 54 (96)
T cd03200 1 ARFLYRLL---GPAPNAPNAATNIDSWVDTAIFQLAE---------------------GSSKEKAAVLRALNSALGR--S 54 (96)
T ss_pred CchHHHHh---cccCCCchHHHHHHHHHHHHHHHHhc---------------------CCHHHHHHHHHHHHHHHcC--C
Confidence 47898883 48999999999999999975422210 0124456788889999986 5
Q ss_pred CcccCCCccHHHHHhHHHHHHHHhhcCCCCccchHHHHHHHHHhcC
Q 030554 113 KYATGDEVFLADLYLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKL 158 (175)
Q Consensus 113 ~~l~G~~~t~aD~~~~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~ 158 (175)
+|++|+++|+|||++++.+.+. +...+.+|+|.+|++||.++
T Consensus 55 ~fl~Gd~~tiADi~l~~~l~~~----~~~~~~~p~l~~w~~r~~~~ 96 (96)
T cd03200 55 PWLVGSEFTVADIVSWCALLQT----GLASAAPANVQRWLKSCENL 96 (96)
T ss_pred CccCCCCCCHHHHHHHHHHHHc----ccccccChHHHHHHHHHHhC
Confidence 9999999999999999988653 33346799999999999863
No 49
>KOG3027 consensus Mitochondrial outer membrane protein Metaxin 2, Metaxin 1-binding protein [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.53 E-value=2.2e-13 Score=93.45 Aligned_cols=144 Identities=19% Similarity=0.169 Sum_probs=112.2
Q ss_pred hCCCCccCeeecCCcccccHHHHHHHHHHhCCCCCCCC-ccHHHHHHHHHHHHHHhccccchhHHHHHH-----------
Q 030554 10 INPIGYVPALVDGDFVVSDSFAILMYLEEKYPQPPLLP-SDLKRKAINYQAANIVSSSIQPLQNLAVVK----------- 77 (175)
Q Consensus 10 ~nP~~~vP~L~~~g~~l~es~~I~~yL~~~~~~~~l~p-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~----------- 77 (175)
++|.|+||.|..|.+.++|--.|..+..++-- .|.. -+..+++.++.+++.+++.+..+-....+.
T Consensus 62 mSP~G~vPllr~g~~~~aef~pIV~fVeak~~--~l~s~lsE~qkadmra~vslVen~~t~aEl~~s~~de~ty~~vT~~ 139 (257)
T KOG3027|consen 62 MSPGGKVPLLRIGKTLFAEFEPIVDFVEAKGV--TLTSWLSEDQKADMRAYVSLVENLLTTAELYVSWNDEETYDEVTAL 139 (257)
T ss_pred cCCCCCCceeeecchhhhhhhHHHHHHHHhcc--chhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhhh
Confidence 58999999999999999999999999999842 2322 256788999999998887654322221111
Q ss_pred ------------------------HhhhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHHHH
Q 030554 78 ------------------------YIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQLYA 133 (175)
Q Consensus 78 ------------------------~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l~~ 133 (175)
.++...+.....+.+.+++...+++|+..|+. ++||.|++||-.|..+|+++..
T Consensus 140 R~gs~ypWPLs~i~~f~Krr~~~r~lk~~~W~~~~~DqVie~vdkc~~aLsa~L~~--q~yf~g~~P~elDAlvFGHlyt 217 (257)
T KOG3027|consen 140 RYGSVYPWPLSHILPFVKRRKALRELKVYDWDDKTMDQVIEQVDKCCRALSAQLGS--QPYFTGDQPTELDALVFGHLYT 217 (257)
T ss_pred ccCCCCCCcHHHHHHHHHHHHHHHHHhhcCcccccHHHHHHHHHHHHHHHHHHhcC--CCccCCCCccHHHHHHHhhhHH
Confidence 11223345567888999999999999999996 6999999999999999999998
Q ss_pred HHhhcCCC-------CccchHHHHHHHHHhcC
Q 030554 134 AVNRFNLD-------MTQFPLLLRLHEAYSKL 158 (175)
Q Consensus 134 ~~~~~~~~-------~~~~p~l~~~~~~~~~~ 158 (175)
+ ....+. +.+|++|.++..|+.++
T Consensus 218 i-lTt~Lpn~ela~~lkkys~LlefcrrIeq~ 248 (257)
T KOG3027|consen 218 I-LTTRLPNMELANILKKYSNLLEFCRRIEQQ 248 (257)
T ss_pred h-hhhcCCcHHHHHHHHHhHHHHHHHHHHHHH
Confidence 8 443332 46799999999999874
No 50
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.53 E-value=7.4e-14 Score=90.15 Aligned_cols=75 Identities=21% Similarity=0.297 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc-CCCcccCCCccHHHHHhHHHHHHHHhhcCCCCccchHHHHHHHHHhcChhhhhhCC
Q 030554 88 RDIWAKTHIGKGFAALEKLLKDY-AGKYATGDEVFLADLYLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAAP 166 (175)
Q Consensus 88 ~~~~~~~~~~~~l~~le~~L~~~-~~~~l~G~~~t~aD~~~~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~ 166 (175)
..+.....+.+.+..+|.+|... +++||+|+ +|+||+++++++.+. ...+.+.. |+|.+|+++|.++|++++++.
T Consensus 38 ~~~~~~~~~~~~~~~le~~l~~~~~~~yl~Gd-~T~ADi~l~~~~~~~-~~~~~~~~--P~l~~~~~rv~~rPsv~~~~~ 113 (114)
T cd03194 38 LSEAVQADIARIEAIWAECLARFQGGPFLFGD-FSIADAFFAPVVTRF-RTYGLPLS--PAAQAYVDALLAHPAMQEWIA 113 (114)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC-CcHHHHHHHHHHHHH-HHcCCCCC--HHHHHHHHHHHCCHHHHHHHh
Confidence 34555666777777888777543 46899999 999999999999888 55555433 999999999999999999864
No 51
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.52 E-value=2.8e-14 Score=101.86 Aligned_cols=144 Identities=19% Similarity=0.216 Sum_probs=110.4
Q ss_pred CCccCeeecC--C-cccccHHHHHHHHHHhCC-----CCCCCCccHHHHHHHHHHHHHHhccccchhHHHHHHHhhhccC
Q 030554 13 IGYVPALVDG--D-FVVSDSFAILMYLEEKYP-----QPPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAG 84 (175)
Q Consensus 13 ~~~vP~L~~~--g-~~l~es~~I~~yL~~~~~-----~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (175)
.-+||+|.|. . .+-.||..|++.+...|. ...|+| ..-+.+++.+.+++.+.+..-+- ..+...
T Consensus 127 RvTVPVLwDk~~~tIVnNES~eIirm~N~aFde~~~~~~dlyP--~~Lr~eId~~n~~Iy~~vNNGVY------k~GFA~ 198 (324)
T COG0435 127 RVTVPVLWDKKTQTIVNNESAEIIRMFNSAFDEFGASAVDLYP--EALRTEIDELNKWIYDTVNNGVY------KAGFAT 198 (324)
T ss_pred ceeEEEEEecCCCeeecCCcHHHHHHHHHHHHHHhhhccccCC--HHHHHHHHHHHhhhcccccCcee------eecccc
Confidence 5689999954 2 334899999999987664 256888 45588888888888876654321 111122
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHHHHHHhhcC----C---CCccchHHHHHHHHHhc
Q 030554 85 ADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQLYAAVNRFN----L---DMTQFPLLLRLHEAYSK 157 (175)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l~~~~~~~~----~---~~~~~p~l~~~~~~~~~ 157 (175)
..++.++....+-+.|+.||++|++ +.||+|+++|-||+-+|+.|.++...+- . .+..||+|..|+..+.+
T Consensus 199 tq~aYeea~~~lF~~Ld~lE~~L~~--~ryl~Gd~lTEAD~RLftTlvRFD~VYvgHFKCN~~rI~dypnL~~yLr~LYq 276 (324)
T COG0435 199 TQEAYEEAVKKLFEALDKLEQILSE--RRYLTGDQLTEADIRLFTTLVRFDPVYVGHFKCNLRRIRDYPNLWGYLRDLYQ 276 (324)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhc--CeeeccccchHhhhhhhheeEeecceEEeeeecccchhhcCchHHHHHHHHhc
Confidence 4567777888888999999999998 5999999999999999999988743332 1 25679999999999999
Q ss_pred ChhhhhhCC
Q 030554 158 LPAFQNAAP 166 (175)
Q Consensus 158 ~~~~~~~~~ 166 (175)
.|+|+.++.
T Consensus 277 ~pg~~~T~d 285 (324)
T COG0435 277 LPGFAETVD 285 (324)
T ss_pred Ccccccccc
Confidence 999998764
No 52
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.51 E-value=5.6e-14 Score=89.22 Aligned_cols=102 Identities=18% Similarity=0.195 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHHhccccchhHHHHH-H-HhhhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHH
Q 030554 52 RKAINYQAANIVSSSIQPLQNLAVV-K-YIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAP 129 (175)
Q Consensus 52 ~~a~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~ 129 (175)
+++++++|+.+..+.+.+.+..... . ........++..+....++.+.++.||+.|++ ++|++|+++|+||+++++
T Consensus 2 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~g~~~slaDi~~~~ 79 (105)
T cd03179 2 ERAQVLRWLFFEQYSHEPYIATLRFLRVYLGLGEADAEVLAFLRERGHAALAVLEAHLAG--RDFLVGDALTIADIALAA 79 (105)
T ss_pred cHHHHHHHHHHhhcccCccceeeeeeEeeccCCCCCHHHHHHHHHHHHHHHHHHHHHHcc--CccccCCCCCHHHHHHHH
Confidence 5788999999988877765432211 1 11122224567778899999999999999975 589999999999999999
Q ss_pred HHHHHHhhcCCCCccchHHHHHHHHHh
Q 030554 130 QLYAAVNRFNLDMTQFPLLLRLHEAYS 156 (175)
Q Consensus 130 ~l~~~~~~~~~~~~~~p~l~~~~~~~~ 156 (175)
++.++ ...+.+...+|+|.+|+++++
T Consensus 80 ~~~~~-~~~~~~~~~~p~l~~~~~~~~ 105 (105)
T cd03179 80 YTHVA-DEGGFDLADYPAIRAWLARIE 105 (105)
T ss_pred HHHhc-cccCCChHhCccHHHHHHhhC
Confidence 99887 555555678999999999974
No 53
>KOG4244 consensus Failed axon connections (fax) protein/glutathione S-transferase-like protein [Signal transduction mechanisms]
Probab=99.51 E-value=2.6e-13 Score=96.56 Aligned_cols=149 Identities=19% Similarity=0.167 Sum_probs=100.7
Q ss_pred hhhhhCCCCccCeeecCCcccccHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHhccccc----------------
Q 030554 6 DFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQPPLLPSDLKRKAINYQAANIVSSSIQP---------------- 69 (175)
Q Consensus 6 ~~~~~nP~~~vP~L~~~g~~l~es~~I~~yL~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~---------------- 69 (175)
++...++.|++|.++-||..+.||..|..+|.+.++-+...+ +.++++.++....++..+.-
T Consensus 84 ~~~~rSr~G~lPFIELNGe~iaDS~~I~~~L~~hf~~~~~L~--~e~~a~s~Al~rm~dnhL~~~l~y~k~~~~~~~~~~ 161 (281)
T KOG4244|consen 84 SLKRRSRNGTLPFIELNGEHIADSDLIEDRLRKHFKIPDDLS--AEQRAQSRALSRMADNHLFWILLYYKGADDAWLNTD 161 (281)
T ss_pred cceeeccCCCcceEEeCCeeccccHHHHHHHHHHcCCCCCCC--HHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHH
Confidence 344678999999999999999999999999999987544122 45555555544444332110
Q ss_pred ------------hhHHHHHH-Hhh----hcc--Cch-HHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHH
Q 030554 70 ------------LQNLAVVK-YIE----EKA--GAD-ERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAP 129 (175)
Q Consensus 70 ------------~~~~~~~~-~~~----~~~--~~~-~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~ 129 (175)
.+...++. ... .+. ... -..++..+.+++-|..++..|++ ++||+|+++|-+|+.+|+
T Consensus 162 ~~~~~l~~~l~~~l~~~~~~~~f~~kv~~r~~g~IG~f~~~Ei~ell~rDlr~i~~~Lg~--KkflfGdkit~~DatvFg 239 (281)
T KOG4244|consen 162 RKLIGLPGFLFPLLLPLFWKAIFGKKVYKRSTGAIGDFESAEIDELLHRDLRAISDYLGD--KKFLFGDKITPADATVFG 239 (281)
T ss_pred HhccCccccchHHHHHHHHHHHHHHHHHHHhhccccCcCHHHHHHHHHHHHHHHHHHhCC--CccccCCCCCcceeeehh
Confidence 11111100 000 000 001 12344667788999999999997 699999999999999999
Q ss_pred HHHHHHhhcCCC-----CccchHHHHHHHHHhcC
Q 030554 130 QLYAAVNRFNLD-----MTQFPLLLRLHEAYSKL 158 (175)
Q Consensus 130 ~l~~~~~~~~~~-----~~~~p~l~~~~~~~~~~ 158 (175)
.|.++..-+... -+++|+|..|++||++.
T Consensus 240 qLa~v~YP~~~~i~d~le~d~p~l~eYceRIr~~ 273 (281)
T KOG4244|consen 240 QLAQVYYPFRSHISDLLEGDFPNLLEYCERIRKE 273 (281)
T ss_pred hhhheeccCCCcHHHHHhhhchHHHHHHHHHHHH
Confidence 999884422222 25799999999999973
No 54
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=99.50 E-value=5.7e-14 Score=88.45 Aligned_cols=69 Identities=25% Similarity=0.418 Sum_probs=56.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHHHHHHhhcCCCC-ccchHHHHHHHHHhc
Q 030554 86 DERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQLYAAVNRFNLDM-TQFPLLLRLHEAYSK 157 (175)
Q Consensus 86 ~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l~~~~~~~~~~~-~~~p~l~~~~~~~~~ 157 (175)
....+.....+.+.+..||+.|++++++||+|++||+||+++|++|..+ . .. .+ +.+|+|.+|++||++
T Consensus 30 ~~~~~~~~~~~~~~l~~l~~~L~~~~~~~l~G~~~T~AD~~v~~~l~~~-~-~~-~~~~~~p~L~~w~~ri~~ 99 (99)
T PF14497_consen 30 EASGDFSREELPKALKILEKHLAERGGDFLVGDKPTLADIAVFGFLASL-R-WA-DFPKDYPNLVRWYERIEE 99 (99)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHTSSSSSSSSS--HHHHHHHHHHHHH-H-CC-HHTTTCHHHHHHHHHHHT
T ss_pred hhhHHhhHHHHHHHHHHHHHHHHcCCCeeecCCCCCHHHHHHHHHHHHH-h-hc-ccccccHHHHHHHHhhcC
Confidence 3467888899999999999999987556999999999999999999777 3 22 33 589999999999975
No 55
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.50 E-value=2.2e-13 Score=86.89 Aligned_cols=76 Identities=20% Similarity=0.122 Sum_probs=63.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhcC--------CCcccCCCccHHHHHhHHHHHHHHhhcCCCC-----ccchHHHHH
Q 030554 85 ADERDIWAKTHIGKGFAALEKLLKDYA--------GKYATGDEVFLADLYLAPQLYAAVNRFNLDM-----TQFPLLLRL 151 (175)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~le~~L~~~~--------~~~l~G~~~t~aD~~~~~~l~~~~~~~~~~~-----~~~p~l~~~ 151 (175)
+....+.....+.+.|..||+.|.++. ++||+|+++|+|||++++.+.++ ...+++. ..+|+|.+|
T Consensus 23 ~~~~i~~~~~~l~~~l~~LE~~L~~~~~~~~~~~~~~yL~Gd~~TlADi~l~~~l~~~-~~~~~~~~~~~~~~~P~l~~w 101 (111)
T cd03204 23 NVEYLKKILDELEMVLDQVEQELQRRKEETEEQKCQLWLCGDTFTLADISLGVTLHRL-KFLGLSRRYWGNGKRPNLEAY 101 (111)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccCCCccCCCCCCHHHHHHHHHHHHH-HHcCccccccccccChHHHHH
Confidence 345677888999999999999997531 25999999999999999999988 4444442 479999999
Q ss_pred HHHHhcChhh
Q 030554 152 HEAYSKLPAF 161 (175)
Q Consensus 152 ~~~~~~~~~~ 161 (175)
++||.+||+|
T Consensus 102 ~~rv~aRpsf 111 (111)
T cd03204 102 FERVLQRESF 111 (111)
T ss_pred HHHHHcCCCC
Confidence 9999999986
No 56
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=99.49 E-value=2.1e-13 Score=88.88 Aligned_cols=78 Identities=24% Similarity=0.310 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHHHHHHhhc----CCC-CccchHHHHHHHHHhcChhhhhh
Q 030554 90 IWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQLYAAVNRF----NLD-MTQFPLLLRLHEAYSKLPAFQNA 164 (175)
Q Consensus 90 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l~~~~~~~----~~~-~~~~p~l~~~~~~~~~~~~~~~~ 164 (175)
+.....+.+.|..||..|++. ++||+|+++|+||+++++++.++.... +.. .+.+|+|.+|+++|.+||+|+++
T Consensus 29 ~~~~~~l~~~l~~Le~~L~~~-~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~P~l~~w~~rl~~rps~~~t 107 (121)
T cd03201 29 DGTEQALLDELEALEDHLKEN-GPFINGEKISAVDLSLAPKLYHLEIALGHYKNWSVPESLTSVKSYMKALFSRESFVKT 107 (121)
T ss_pred HHHHHHHHHHHHHHHHHHhcC-CCccCCCCCCHHhHHHHHHHHHHHHHHHHhcCCCCcccchHHHHHHHHHHCCchhhhc
Confidence 445567888999999999852 599999999999999999877663221 232 36899999999999999999999
Q ss_pred CCcC
Q 030554 165 APEK 168 (175)
Q Consensus 165 ~~~~ 168 (175)
++.+
T Consensus 108 ~~~~ 111 (121)
T cd03201 108 KAEK 111 (121)
T ss_pred CCCH
Confidence 8754
No 57
>KOG2903 consensus Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.45 E-value=1e-13 Score=98.18 Aligned_cols=146 Identities=18% Similarity=0.134 Sum_probs=108.8
Q ss_pred CCccCeeecC---CcccccHHHHHHHHHHh---------CCCCCCCCccHHHHHHHHHHHHHHhccccchhHHHHHHHhh
Q 030554 13 IGYVPALVDG---DFVVSDSFAILMYLEEK---------YPQPPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIE 80 (175)
Q Consensus 13 ~~~vP~L~~~---g~~l~es~~I~~yL~~~---------~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (175)
.-+||+|-|. ..+-.||..|++.+... .+.-.|+| +.-+++++++.+|+.+.+..-+-. -
T Consensus 121 rfTVPVLWD~k~ktIVnNES~eIIr~fNs~f~ef~~~~e~~~lDL~P--~~L~~~Ide~N~wvy~~INNGVYk------~ 192 (319)
T KOG2903|consen 121 RFTVPVLWDLKTKTIVNNESSEIIRMFNSAFDEFNGIAENPVLDLYP--SSLRAQIDETNSWVYDKINNGVYK------C 192 (319)
T ss_pred eEEEEEEEccccceeecCchHHHHHHHhhhhhhhhccccCCccccCC--HHHHHHHhhhhceecccccCceee------e
Confidence 4689999965 34558999999999932 23356777 455888888888887766543211 0
Q ss_pred hccCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHHHHHHhhcCCC-------C-ccchHHHHHH
Q 030554 81 EKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQLYAAVNRFNLD-------M-TQFPLLLRLH 152 (175)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l~~~~~~~~~~-------~-~~~p~l~~~~ 152 (175)
+-....+..+.....+-+.|+.+|++|+++.+.|++|+++|.|||.+|+.+.++...+... + ++||+|..|.
T Consensus 193 GFA~~~e~Ye~~V~~lfe~LDr~E~vL~~~~~~f~~G~~LTeaDirLy~TiIRFD~VY~~hFKCn~~~ir~~Yp~l~~~l 272 (319)
T KOG2903|consen 193 GFAEKQEAYEEEVNQLFEALDRCEDVLGKNRKYFLCGDTLTEADIRLYTTIIRFDEVYVQHFKCNKKTIRDEYPNLHNWL 272 (319)
T ss_pred ccccccchHHHHHHHHHHHHHHHHHHHhcccceEeeccccchhheeeeeeEEeehhhhheeeecchhhhhccCcHHHHHH
Confidence 1112445667777788888999999999864569999999999999999998875444321 3 4899999999
Q ss_pred HHHhc-ChhhhhhCC
Q 030554 153 EAYSK-LPAFQNAAP 166 (175)
Q Consensus 153 ~~~~~-~~~~~~~~~ 166 (175)
.++.. .|+++.+..
T Consensus 273 k~iY~~~~~~~~Ttd 287 (319)
T KOG2903|consen 273 KNIYWNIPGFSSTTD 287 (319)
T ss_pred HHHHhhccchhhccc
Confidence 99999 899887653
No 58
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=99.44 E-value=1.1e-12 Score=77.02 Aligned_cols=65 Identities=31% Similarity=0.399 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHHHHHHhhcCCC---CccchHHHHHHHH
Q 030554 87 ERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQLYAAVNRFNLD---MTQFPLLLRLHEA 154 (175)
Q Consensus 87 ~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l~~~~~~~~~~---~~~~p~l~~~~~~ 154 (175)
...+.+...+.+.|+.||+.|+. ++|++|++||+||+++++++.++ ...+.. ...+|+|.+|++|
T Consensus 2 ~~~~~~~~~~~~~l~~le~~L~~--~~fl~G~~~s~aD~~l~~~l~~~-~~~~~~~~~~~~~p~l~~w~~r 69 (69)
T PF13410_consen 2 AAVERARAQLEAALDALEDHLAD--GPFLFGDRPSLADIALAPFLWRL-RFVGPDFDLLEAYPNLRAWYER 69 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT--SSBTTBSS--HHHHHHHHHHHHH-HHCTHTCCHHTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh--CCCCCCCCCCHHHHHHHHHHHHH-HHhCcCcCccccCHHHHHHHhC
Confidence 35678889999999999999997 47999999999999999999998 444432 3689999999987
No 59
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=99.41 E-value=1.8e-12 Score=82.21 Aligned_cols=101 Identities=22% Similarity=0.234 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHHhccccchhHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHH
Q 030554 52 RKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQL 131 (175)
Q Consensus 52 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l 131 (175)
++++++.+++...+.........+... +....+.........+.+.+..||+.|.+.+++|++|+++|+||+++++++
T Consensus 2 e~~~v~~~~~~~~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~~~~G~~~s~aDi~l~~~~ 79 (104)
T cd03192 2 EAARVDALVDTIADLRAEFAKYFYEKD--GEEKKEKKKEFLKEAIPKYLKKLEKILKENGGGYLVGDKLTWADLVVFDVL 79 (104)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCc--hHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCeeeCCCccHHHHHHHHHH
Confidence 466777787776555444333222110 001124566777888999999999999763358999999999999999999
Q ss_pred HHHHhhcCC-C-CccchHHHHHHHHH
Q 030554 132 YAAVNRFNL-D-MTQFPLLLRLHEAY 155 (175)
Q Consensus 132 ~~~~~~~~~-~-~~~~p~l~~~~~~~ 155 (175)
.++ ...+. . ...+|+|.+|+++|
T Consensus 80 ~~~-~~~~~~~~~~~~p~l~~~~~~~ 104 (104)
T cd03192 80 DYL-LYLDPKLLLKKYPKLKALRERV 104 (104)
T ss_pred HHH-HhhCchhhHHhChhHHHHHHhC
Confidence 988 44433 3 57899999999985
No 60
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=99.39 E-value=1.4e-12 Score=81.64 Aligned_cols=96 Identities=22% Similarity=0.261 Sum_probs=68.7
Q ss_pred HHHHHHHhccccchhHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHHHHHHh
Q 030554 57 YQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQLYAAVN 136 (175)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l~~~~~ 136 (175)
+.|++++...+...+..............++..+...+.+.+.++.||+.|++ ++|++|+++|+||+++++++.++ .
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~--~~~~~g~~~t~aDi~~~~~l~~~-~ 78 (100)
T cd00299 2 RAWEEWADTTLEPAARRLLLLAFVGPEVDEAALEEAREELAAALAALEKLLAG--RPYLAGDRFSLADIALAPVLARL-D 78 (100)
T ss_pred hHHHHHHHhhcCCcccceeeeeccCCCCCHHHHHHHHHHHHHHHHHHHHHHcc--CCCCCCCCcCHHHHHHHHHHHHH-H
Confidence 45666666655544433222111111123556778888999999999999986 58999999999999999999998 4
Q ss_pred hcCCC---CccchHHHHHHHHH
Q 030554 137 RFNLD---MTQFPLLLRLHEAY 155 (175)
Q Consensus 137 ~~~~~---~~~~p~l~~~~~~~ 155 (175)
..... .+.+|+|.+|+++|
T Consensus 79 ~~~~~~~~~~~~p~l~~~~~~~ 100 (100)
T cd00299 79 LLGPLLGLLDEYPRLAAWYDRL 100 (100)
T ss_pred HhhhhhhhhccCccHHHHHHhC
Confidence 44433 47799999999875
No 61
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=99.33 E-value=2.9e-11 Score=75.87 Aligned_cols=113 Identities=21% Similarity=0.125 Sum_probs=78.4
Q ss_pred cHHHHHHHHHHHHHHhccccchhHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhH
Q 030554 49 DLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLA 128 (175)
Q Consensus 49 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~ 128 (175)
|..+|++.++...++.+.|.++-..+.+...-........-+.....+.+.+...+.+|.. |++||+|+ .|+||..++
T Consensus 1 D~~~RArAR~vqAwlrSdf~~lR~Erpt~vvf~~~~~~pLs~~a~~~a~kL~~~a~~ll~~-g~~~LFGe-wsIAD~dlA 78 (117)
T PF14834_consen 1 DRQERARARQVQAWLRSDFMALRQERPTNVVFRGARKPPLSEAAQAAAQKLIAVAERLLAD-GGPNLFGE-WSIADADLA 78 (117)
T ss_dssp SHHHHHHHHHHHHHHHHS-HHHHHHS-THHHHS--------HHHHHHHHHHHHHHHHHTTT---SSTTSS---HHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcccHHHHhhCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcc-CCCCcccc-chHHHHHHH
Confidence 3578999999999999998876655544443222223345566777788888888988876 68999995 999999999
Q ss_pred HHHHHHHhhcCCCCccchHHHHHHHHHhcChhhhhhCC
Q 030554 129 PQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAAP 166 (175)
Q Consensus 129 ~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~ 166 (175)
+++.++ ..+|..+. +++..|.++.-++|++++++.
T Consensus 79 ~ml~Rl-~~~gd~vP--~~l~~Ya~~qwqrpsVQ~Wla 113 (117)
T PF14834_consen 79 LMLNRL-VTYGDPVP--ERLADYAERQWQRPSVQRWLA 113 (117)
T ss_dssp HHHHHH-HTTT------HHHHHHHHHHHT-HHHHHHHH
T ss_pred HHHHHH-HHcCCCCC--HHHHHHHHHHHCCHHHHHHHH
Confidence 999999 77776554 789999999999999998764
No 62
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.30 E-value=1.5e-11 Score=80.54 Aligned_cols=68 Identities=15% Similarity=0.033 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHHHHHHhhcCCC-CccchHHHHHHHHHhcC
Q 030554 89 DIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQLYAAVNRFNLD-MTQFPLLLRLHEAYSKL 158 (175)
Q Consensus 89 ~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l~~~~~~~~~~-~~~~p~l~~~~~~~~~~ 158 (175)
.+.....+.+.|+.||+.|++ ++|+.|+++|+||+++++++.+.....+.. .+.+|+|.+|++||.+.
T Consensus 56 ~~~~~~~~~~~l~~l~~~L~~--~~fl~Gd~~t~AD~~l~~~l~~~~~~~~~~~~~~~p~l~~W~~r~~~~ 124 (124)
T cd03202 56 REAALANFRAALEPLRATLKG--QPFLGGAAPNYADYIVFGGFQWARIVSPFPLLEEDDPVYDWFERCLDL 124 (124)
T ss_pred hHHHHHHHHHHHHHHHHHHcC--CCccCCCCCchhHHHHHHHHHHHHHcCcccccccCChHHHHHHHHhcC
Confidence 456778899999999999986 589999999999999999999883323454 46899999999999863
No 63
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=99.24 E-value=3.8e-11 Score=79.85 Aligned_cols=66 Identities=15% Similarity=0.098 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHHHHHHhhc-CC-CCccchHHHHHHHHHhc
Q 030554 90 IWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQLYAAVNRF-NL-DMTQFPLLLRLHEAYSK 157 (175)
Q Consensus 90 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l~~~~~~~-~~-~~~~~p~l~~~~~~~~~ 157 (175)
+.....+...++.+-+.+.. +++|+.|++||+||+++++.+..+ ... ++ ++.++|+|.+|++||++
T Consensus 78 ~D~r~~L~~a~~~w~~~~~~-~~~FlaGd~ptIADisvyg~l~s~-e~~~~~~Dl~~~p~I~~W~eRm~~ 145 (149)
T cd03197 78 DDVREWLYDALNTWVAALGK-DRQFHGGSKPNLADLAVYGVLRSV-EGHPAFKDMVEETKIGEWYERMDA 145 (149)
T ss_pred chHHHHHHHHHHHHHHHhcC-CCCccCCCCCCHHHHHHHHHHHHH-HHhccccchhhCcCHHHHHHHHHH
Confidence 34455566666655555554 368999999999999999999888 555 66 77899999999999986
No 64
>cd03061 GST_N_CLIC GST_N family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division and apoptosis. They can exist in both water-soluble and membrane-bound states, and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and it adopts a fold similar to GSTs, containing an N-terminal domain with a TRX fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. The CLI
Probab=99.24 E-value=1.2e-11 Score=75.90 Aligned_cols=41 Identities=24% Similarity=0.165 Sum_probs=38.1
Q ss_pred CCcchhhhhCCCCccCeeecCCcccccHHHHHHHHHHhCCC
Q 030554 2 FGLVDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQ 42 (175)
Q Consensus 2 ~~~~~~~~~nP~~~vP~L~~~g~~l~es~~I~~yL~~~~~~ 42 (175)
.++++|+++||.|+||+|+++|.+|.||.+|++||+++++.
T Consensus 48 ~~p~~~~~~nP~g~vPvL~~~~~~i~eS~~I~eYLde~~~~ 88 (91)
T cd03061 48 RKPEDLKDLAPGTQPPFLLYNGEVKTDNNKIEEFLEETLCP 88 (91)
T ss_pred CCCHHHHHhCCCCCCCEEEECCEEecCHHHHHHHHHHHccC
Confidence 36789999999999999999999999999999999999864
No 65
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=99.23 E-value=7.7e-11 Score=72.47 Aligned_cols=66 Identities=21% Similarity=0.193 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHHHHHHhh-cCC-----CCccchHHHHHHHHHh
Q 030554 89 DIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQLYAAVNR-FNL-----DMTQFPLLLRLHEAYS 156 (175)
Q Consensus 89 ~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l~~~~~~-~~~-----~~~~~p~l~~~~~~~~ 156 (175)
......++.+.++.||+.|++ ++|++|+++|+||+++++++.++... .+. .++.+|+|.+|++||.
T Consensus 17 ~~~~~~~~~~~l~~le~~L~~--~~yl~Gd~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~r~~ 88 (88)
T cd03193 17 TREIYSLAKKDLKALSDLLGD--KKFFFGDKPTSLDATVFGHLASILYAPLPNSALQLILKEYPNLVEYCERIR 88 (88)
T ss_pred HHHHHHHHHHHHHHHHHHhCC--CCccCCCCCCHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHHhC
Confidence 346677899999999999996 58999999999999999999887321 121 2467999999999984
No 66
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=99.23 E-value=1.2e-10 Score=78.38 Aligned_cols=144 Identities=17% Similarity=0.178 Sum_probs=95.6
Q ss_pred CCCCccCeee-cCCcccccHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHhccccchhHHHHHH------------
Q 030554 11 NPIGYVPALV-DGDFVVSDSFAILMYLEEKYPQPPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVK------------ 77 (175)
Q Consensus 11 nP~~~vP~L~-~~g~~l~es~~I~~yL~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~------------ 77 (175)
-...+||+|+ ++|..+.||+.|++|+++..+++-+-.+ -+-.+.+|+.-+.........+.+.+
T Consensus 43 iG~KqVPiL~Kedg~~m~ESlDIV~y~d~~~~~~~lt~~---~~pai~~wlrkv~~y~nkll~PR~~k~~l~EF~T~sA~ 119 (215)
T COG2999 43 IGQKQVPILQKEDGRAMPESLDIVHYVDELDGKPLLTGK---VRPAIEAWLRKVNGYLNKLLLPRFAKSALPEFATPSAR 119 (215)
T ss_pred hcccccceEEccccccchhhhHHHHHHHHhcCchhhccC---cCHHHHHHHHHhcchHhhhhhhhHhhcCCccccCHHHH
Confidence 3457899999 9999999999999999999876434332 23344556655555544443333322
Q ss_pred -Hh-hhccCch-------HHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHHHHHHhhcCCCCccchHH
Q 030554 78 -YI-EEKAGAD-------ERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQLYAAVNRFNLDMTQFPLL 148 (175)
Q Consensus 78 -~~-~~~~~~~-------~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l~~~~~~~~~~~~~~p~l 148 (175)
+. .+..... ..-.....++...++.|+.++... . -+...+|.-|+.+|+.|+.+....|+.|. .++
T Consensus 120 ~yf~~KKe~s~g~F~~~l~~t~~~~~~i~~dl~~l~~Li~~~--s-~~n~~l~~ddi~vFplLRnlt~v~gi~wp--s~v 194 (215)
T COG2999 120 KYFTDKKEASEGSFESLLNHTAQYLKRIQADLRALDKLIVGP--S-AVNGELSEDDILVFPLLRNLTLVAGIQWP--SRV 194 (215)
T ss_pred HHHHhhhhhccccHHHHHhchHHHHHHHHHHHHHHHHHhcCc--c-hhccccchhhhhhhHHhccceecccCCCc--HHH
Confidence 11 1111000 112344567778888888888752 2 22346999999999999998555566665 789
Q ss_pred HHHHHHHhcChhhh
Q 030554 149 LRLHEAYSKLPAFQ 162 (175)
Q Consensus 149 ~~~~~~~~~~~~~~ 162 (175)
+.|.++|.+...+.
T Consensus 195 ~dy~~~msektqV~ 208 (215)
T COG2999 195 ADYRDNMSEKTQVN 208 (215)
T ss_pred HHHHHHHHHhhCcc
Confidence 99999999876654
No 67
>KOG3028 consensus Translocase of outer mitochondrial membrane complex, subunit TOM37/Metaxin 1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.20 E-value=1.2e-09 Score=79.94 Aligned_cols=145 Identities=19% Similarity=0.195 Sum_probs=106.6
Q ss_pred hCCCCccCeee-cCCcccccHHHHHHHHHHhCCCCCCCCc-cHHHHHHHHHHHHHHhccccchhHHHHHH----------
Q 030554 10 INPIGYVPALV-DGDFVVSDSFAILMYLEEKYPQPPLLPS-DLKRKAINYQAANIVSSSIQPLQNLAVVK---------- 77 (175)
Q Consensus 10 ~nP~~~vP~L~-~~g~~l~es~~I~~yL~~~~~~~~l~p~-~~~~~a~~~~~~~~~~~~~~~~~~~~~~~---------- 77 (175)
.+|.|++|+|+ ++|+.++.-.-|.+||.+...+-.+-+. ...+.+....+++++...+.++..+.++.
T Consensus 44 ~s~sg~LP~l~~~ng~~va~~~~iv~~L~k~~~ky~~d~dl~~kq~a~~~a~~sll~~~l~~a~~~t~~v~~~Ny~e~Tk 123 (313)
T KOG3028|consen 44 RSPSGKLPYLITDNGTKVAGPVKIVQFLKKNTKKYNLDADLSAKQLADTLAFMSLLEENLEPALLYTFWVDTENYNEVTK 123 (313)
T ss_pred CCCCCCCCeEEecCCceeccHHHHHHHHHHhcccCCcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHhH
Confidence 46889999999 7789999999999999985322223333 36788889999999888877655543331
Q ss_pred -------------------------Hhhh-ccCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHH
Q 030554 78 -------------------------YIEE-KAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQL 131 (175)
Q Consensus 78 -------------------------~~~~-~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l 131 (175)
++.. .....+..++......+.+..|+++|+. +.|++|++||--|+.+++++
T Consensus 124 k~yak~l~fP~n~~~p~~l~~qAk~rl~l~~g~~~~~e~~i~~~Aska~~~LS~~Lgs--~kffFgd~psslDa~lfs~l 201 (313)
T KOG3028|consen 124 KWYAKALPFPLNYILPGKLQRQAKERLQLTLGELTEREDQIYKDASKALNLLSTLLGS--KKFFFGDKPSSLDALLFSYL 201 (313)
T ss_pred HHHHhcCCCchhhcchhhhHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHhcC--ceEeeCCCCchHHHHHHHHH
Confidence 0000 0112234566667778889999999997 59999999999999999999
Q ss_pred HHHHhhcCCC-------CccchHHHHHHHHHhc
Q 030554 132 YAAVNRFNLD-------MTQFPLLLRLHEAYSK 157 (175)
Q Consensus 132 ~~~~~~~~~~-------~~~~p~l~~~~~~~~~ 157 (175)
..+ ...... +..++||.+|.++++.
T Consensus 202 a~~-~~~~Lp~~~Lq~~l~~~~NL~~~~~~i~s 233 (313)
T KOG3028|consen 202 AIL-LQVALPNDSLQVHLLAHKNLVRYVERIRS 233 (313)
T ss_pred HHH-HhccCCchhHHHHHHhcchHHHHHHHHHH
Confidence 885 333321 3458999999999987
No 68
>cd03052 GST_N_GDAP1 GST_N family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal TRX-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.17 E-value=1.8e-11 Score=72.61 Aligned_cols=35 Identities=40% Similarity=0.720 Sum_probs=32.8
Q ss_pred CcchhhhhCCCCccCeeecCCcccccHHHHHHHHH
Q 030554 3 GLVDFLKINPIGYVPALVDGDFVVSDSFAILMYLE 37 (175)
Q Consensus 3 ~~~~~~~~nP~~~vP~L~~~g~~l~es~~I~~yL~ 37 (175)
++++|+++||.|+||+|++||..++||.+|++||+
T Consensus 39 ~~~~~~~inP~g~vP~L~~~g~~l~Es~aI~~yLe 73 (73)
T cd03052 39 NEPWFMRLNPTGEVPVLIHGDNIICDPTQIIDYLE 73 (73)
T ss_pred CCHHHHHhCcCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 56789999999999999999999999999999985
No 69
>PF13417 GST_N_3: Glutathione S-transferase, N-terminal domain; PDB: 3ERG_B 3IBH_A 3ERF_A 3UBL_A 3UBK_A 3IR4_A 3M8N_B 2R4V_A 2PER_A 2R5G_A ....
Probab=99.17 E-value=3.9e-11 Score=71.56 Aligned_cols=41 Identities=56% Similarity=0.895 Sum_probs=37.8
Q ss_pred CcchhhhhCCCCccCeeecCCcccccHHHHHHHHHHhCCCC
Q 030554 3 GLVDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQP 43 (175)
Q Consensus 3 ~~~~~~~~nP~~~vP~L~~~g~~l~es~~I~~yL~~~~~~~ 43 (175)
+.++|.++||.++||+|++||..++||.+|++||++.++++
T Consensus 34 ~~~~~~~~~p~~~vPvL~~~g~~l~dS~~I~~yL~~~~~~~ 74 (75)
T PF13417_consen 34 KRPEFLKLNPKGKVPVLVDDGEVLTDSAAIIEYLEERYPGP 74 (75)
T ss_dssp TSHHHHHHSTTSBSSEEEETTEEEESHHHHHHHHHHHSTSS
T ss_pred chhHHHhhcccccceEEEECCEEEeCHHHHHHHHHHHcCCC
Confidence 35789999999999999988999999999999999999864
No 70
>cd03057 GST_N_Beta GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH.
Probab=99.17 E-value=3.4e-11 Score=72.16 Aligned_cols=40 Identities=48% Similarity=0.610 Sum_probs=36.1
Q ss_pred CCcchhhhhCCCCccCeeecC-CcccccHHHHHHHHHHhCC
Q 030554 2 FGLVDFLKINPIGYVPALVDG-DFVVSDSFAILMYLEEKYP 41 (175)
Q Consensus 2 ~~~~~~~~~nP~~~vP~L~~~-g~~l~es~~I~~yL~~~~~ 41 (175)
+++++|+++||.|+||+|+++ |..++||.+|++||++++|
T Consensus 37 ~~~~~~~~~np~~~vP~l~~~~g~~l~eS~aI~~yL~~~~p 77 (77)
T cd03057 37 QKGADYLAINPKGQVPALVLDDGEVLTESAAILQYLADLHP 77 (77)
T ss_pred cCCHhHHHhCCCCCCCEEEECCCcEEEcHHHHHHHHHHhCc
Confidence 357899999999999999965 8999999999999999875
No 71
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.14 E-value=5.7e-10 Score=69.99 Aligned_cols=66 Identities=24% Similarity=0.168 Sum_probs=54.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHHHHHHhh-cCCC-CccchHHHHHHHHH
Q 030554 85 ADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQLYAAVNR-FNLD-MTQFPLLLRLHEAY 155 (175)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l~~~~~~-~~~~-~~~~p~l~~~~~~~ 155 (175)
.+...+.....+.+.|..||+.|++ ++| +++|+||+++++.+.+.... .+.. ..++|+|.+|+++|
T Consensus 31 ~~~~~~~~~~~~~~~l~~le~~L~~--~~~---d~~TlADi~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~rm 98 (98)
T cd03205 31 SQPWLERQRGKIERALDALEAELAK--LPL---DPLDLADIAVACALGYLDFRHPDLDWRAAHPALAAWYARF 98 (98)
T ss_pred ChHHHHHHHHHHHHHHHHHHHhhhh--CCC---CCCCHHHHHHHHHHHHHHhHccCcchhhhChHHHHHHHhC
Confidence 5567888999999999999999986 477 89999999999999888322 3333 46899999999986
No 72
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=99.14 E-value=1.3e-10 Score=76.17 Aligned_cols=69 Identities=17% Similarity=0.218 Sum_probs=56.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHHHHHHhh-c---CC--CCccchHHHHHHHHHh
Q 030554 86 DERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQLYAAVNR-F---NL--DMTQFPLLLRLHEAYS 156 (175)
Q Consensus 86 ~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l~~~~~~-~---~~--~~~~~p~l~~~~~~~~ 156 (175)
....+.......+.|..|+.+|++ ++||+|++||.+|+++|+++..+... . .. .+..+|+|.+|++||.
T Consensus 52 r~~~ee~~~~~~~~l~aLs~~Lg~--~~~l~Gd~pT~~Da~vf~~la~~~~~~~~~~~l~~~~~~~pnL~~y~~Ri~ 126 (126)
T cd03211 52 DKTLDQVIEEVDQCCQALSQRLGT--QPYFFGDQPTELDALVFGHLFTILTTQLPNDELAEKVKKYSNLLAFCRRIE 126 (126)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHCC--CCCCCCCCCcHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHhcC
Confidence 345677888889999999999997 59999999999999999999887322 1 11 1567999999999984
No 73
>cd03046 GST_N_GTT1_like GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pomb
Probab=99.14 E-value=5.5e-11 Score=70.99 Aligned_cols=39 Identities=54% Similarity=0.966 Sum_probs=36.3
Q ss_pred CcchhhhhCCCCccCeeecCCcccccHHHHHHHHHHhCC
Q 030554 3 GLVDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKYP 41 (175)
Q Consensus 3 ~~~~~~~~nP~~~vP~L~~~g~~l~es~~I~~yL~~~~~ 41 (175)
+.++|+++||.++||+|+++|..++||.+|++||++++|
T Consensus 38 ~~~~~~~~~p~~~vP~l~~~g~~l~es~aI~~yL~~~~~ 76 (76)
T cd03046 38 APPEYLAINPLGKVPVLVDGDLVLTESAAIILYLAEKYG 76 (76)
T ss_pred CCHHHHhcCCCCCCCEEEECCEEEEcHHHHHHHHHHhCc
Confidence 567899999999999999999999999999999999874
No 74
>KOG3029 consensus Glutathione S-transferase-related protein [General function prediction only]
Probab=99.13 E-value=2.8e-10 Score=81.87 Aligned_cols=147 Identities=17% Similarity=0.114 Sum_probs=95.6
Q ss_pred hhCCCCccCeeecCCcccccHHHHHHHHHH--------------hCCCCCC----------C------------C-ccHH
Q 030554 9 KINPIGYVPALVDGDFVVSDSFAILMYLEE--------------KYPQPPL----------L------------P-SDLK 51 (175)
Q Consensus 9 ~~nP~~~vP~L~~~g~~l~es~~I~~yL~~--------------~~~~~~l----------~------------p-~~~~ 51 (175)
+.+...+||+|...|..+.||.+|+.-|+. .||.-.. + | .+..
T Consensus 130 k~SsykKVPil~~~Geqm~dSsvIIs~laTyLq~~~q~l~eiiq~yPa~~~~ne~GK~v~~~~NKyflM~~e~d~~~~ke 209 (370)
T KOG3029|consen 130 KWSSYKKVPILLIRGEQMVDSSVIISLLATYLQDKRQDLGEIIQMYPATSFFNEDGKEVNDILNKYFLMYREHDPGVSKE 209 (370)
T ss_pred cccccccccEEEeccceechhHHHHHHHHHHhccCCCCHHHHHHhccccccccccccchhhcchhheeeeeccCCCcccc
Confidence 445568999999767789999999987743 2331000 0 0 0223
Q ss_pred HHHHHHHHHHHHhccccchhHHHHHH---------------------------------------HhhhccCchHHHHHH
Q 030554 52 RKAINYQAANIVSSSIQPLQNLAVVK---------------------------------------YIEEKAGADERDIWA 92 (175)
Q Consensus 52 ~~a~~~~~~~~~~~~~~~~~~~~~~~---------------------------------------~~~~~~~~~~~~~~~ 92 (175)
.+...+.|.+|+++.+..++.+..++ .+.+.-.....+...
T Consensus 210 ~~~eerkWR~WvDn~lVHLiSPNvYrn~~EsletFewf~q~G~w~~~FpawEr~lavY~GAtAM~lisK~LKkkhni~D~ 289 (370)
T KOG3029|consen 210 TDEEERKWRSWVDNHLVHLISPNVYRNMGESLETFEWFSQAGEWDVHFPAWERDLAVYCGATAMYLISKMLKKKHNISDE 289 (370)
T ss_pred chHHHhHHHHHHhhhhhhhcCcccccChhhHHHHHHHHHHcCCccccCchHHHHHHHHhhHHHHHHHHHHHHhhcccchH
Confidence 34567788888888765544332221 000100112223346
Q ss_pred HHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHHHHHHhhcC--CCCccchHHHHHHHHHhc
Q 030554 93 KTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQLYAAVNRFN--LDMTQFPLLLRLHEAYSK 157 (175)
Q Consensus 93 ~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l~~~~~~~~--~~~~~~p~l~~~~~~~~~ 157 (175)
.+.+-+.++.+-..|+.+ .+|+.|++|++||..+|++|+.+ +... .+.-...++..|+-+|++
T Consensus 290 Re~lydA~d~Wvaalgkn-r~flGG~kPnLaDLsvfGvl~sm-~gc~afkd~~q~t~I~eW~~rmea 354 (370)
T KOG3029|consen 290 REHLYDAADQWVAALGKN-RPFLGGKKPNLADLSVFGVLRSM-EGCQAFKDCLQNTSIGEWYYRMEA 354 (370)
T ss_pred HHHHHHHHHHHHHHhCCC-CCccCCCCCchhhhhhhhhhhHh-hhhhHHHHHHhcchHHHHHHHHHH
Confidence 677777888888888653 79999999999999999999988 4433 233456889999999987
No 75
>cd03048 GST_N_Ure2p_like GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The N-terminal TRX-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. Characterized GSTs in this subfamily include Aspergillus fumigatus GSTs 1 and 2, and
Probab=99.13 E-value=6.3e-11 Score=71.72 Aligned_cols=39 Identities=54% Similarity=0.789 Sum_probs=35.8
Q ss_pred CcchhhhhCCCCccCeeecC---CcccccHHHHHHHHHHhCC
Q 030554 3 GLVDFLKINPIGYVPALVDG---DFVVSDSFAILMYLEEKYP 41 (175)
Q Consensus 3 ~~~~~~~~nP~~~vP~L~~~---g~~l~es~~I~~yL~~~~~ 41 (175)
++++|+++||.++||+|+++ |..|+||.+|++||+++++
T Consensus 39 ~~~~~~~~~p~~~vP~l~~~~~~g~~l~eS~aI~~yL~~~~~ 80 (81)
T cd03048 39 KKPEFLKINPNGRIPAIVDHNGTPLTVFESGAILLYLAEKYD 80 (81)
T ss_pred cCHHHHHhCcCCCCCEEEeCCCCceEEEcHHHHHHHHHHHhC
Confidence 46789999999999999976 8999999999999999986
No 76
>cd03050 GST_N_Theta GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DC
Probab=99.08 E-value=1.1e-10 Score=69.69 Aligned_cols=37 Identities=57% Similarity=0.975 Sum_probs=34.2
Q ss_pred cchhhhhCCCCccCeeecCCcccccHHHHHHHHHHhC
Q 030554 4 LVDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKY 40 (175)
Q Consensus 4 ~~~~~~~nP~~~vP~L~~~g~~l~es~~I~~yL~~~~ 40 (175)
.++|+++||.|+||+|+++|..++||.+|++||++++
T Consensus 40 ~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~Yl~~~~ 76 (76)
T cd03050 40 TPEFKKINPFGKVPAIVDGDFTLAESVAILRYLARKF 76 (76)
T ss_pred CHHHHHhCcCCCCCEEEECCEEEEcHHHHHHHHHhhC
Confidence 4689999999999999999999999999999999864
No 77
>cd03059 GST_N_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal TRX-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.07 E-value=1.5e-10 Score=68.56 Aligned_cols=38 Identities=42% Similarity=0.732 Sum_probs=35.1
Q ss_pred CcchhhhhCCCCccCeeecCCcccccHHHHHHHHHHhC
Q 030554 3 GLVDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKY 40 (175)
Q Consensus 3 ~~~~~~~~nP~~~vP~L~~~g~~l~es~~I~~yL~~~~ 40 (175)
+.++|+++||.|+||+|+++|..+.||.+|++||++++
T Consensus 36 ~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~~~~ 73 (73)
T cd03059 36 PPEDLAELNPYGTVPTLVDRDLVLYESRIIMEYLDERF 73 (73)
T ss_pred CCHHHHhhCCCCCCCEEEECCEEEEcHHHHHHHHHhhC
Confidence 46789999999999999999999999999999999864
No 78
>PF13409 GST_N_2: Glutathione S-transferase, N-terminal domain; PDB: 3C8E_B 3M1G_A 3R3E_A 3O3T_A 1RK4_A 1K0O_B 1K0N_A 3QR6_A 3SWL_A 3TGZ_B ....
Probab=99.05 E-value=2e-10 Score=67.53 Aligned_cols=37 Identities=49% Similarity=0.751 Sum_probs=32.5
Q ss_pred CcchhhhhCCCCccCeee-cCCcccccHHHHHHHHHHh
Q 030554 3 GLVDFLKINPIGYVPALV-DGDFVVSDSFAILMYLEEK 39 (175)
Q Consensus 3 ~~~~~~~~nP~~~vP~L~-~~g~~l~es~~I~~yL~~~ 39 (175)
++++|.++||.|+||+|+ ++|.++.||.+|++||++.
T Consensus 33 ~~~~~~~~~p~~~VP~L~~~~g~vi~eS~~I~~yL~~~ 70 (70)
T PF13409_consen 33 KPPEFLALNPRGKVPVLVDPDGTVINESLAILEYLEEQ 70 (70)
T ss_dssp TCHBHHHHSTT-SSSEEEETTTEEEESHHHHHHHHHHT
T ss_pred cChhhhccCcCeEEEEEEECCCCEeeCHHHHHHHHhcC
Confidence 347899999999999999 5899999999999999863
No 79
>PF02798 GST_N: Glutathione S-transferase, N-terminal domain; InterPro: IPR004045 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of Cephalopoda is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Soluble GSTs activate glutathione (GSH) to GS-. In many GSTs, this is accomplished by a Tyr at H-bonding distance from the sulphur of GSH. These enzymes catalyse nucleophilic attack by reduced glutathione (GSH) on nonpolar compounds that contain an electrophillic carbon, nitrogen, or sulphur atom []. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold, with each monomer composed of two distinct domains []. The N-terminal domain forms a thioredoxin-like fold that binds the glutathione moiety, while the C-terminal domain contains several hydrophobic alpha-helices that specifically bind hydrophobic substrates. This entry represents the N-terminal domain of GST.; GO: 0005515 protein binding; PDB: 2VCT_H 2WJU_B 4ACS_A 1BYE_D 1AXD_B 2VCV_P 1TDI_A 1JLV_D 1Y6E_A 1U88_B ....
Probab=99.05 E-value=1.8e-10 Score=68.89 Aligned_cols=36 Identities=56% Similarity=0.870 Sum_probs=33.4
Q ss_pred CcchhhhhCCC-CccCeeecC-CcccccHHHHHHHHHH
Q 030554 3 GLVDFLKINPI-GYVPALVDG-DFVVSDSFAILMYLEE 38 (175)
Q Consensus 3 ~~~~~~~~nP~-~~vP~L~~~-g~~l~es~~I~~yL~~ 38 (175)
+.++|++.||. |+||+|+++ |..++||.||++||++
T Consensus 39 ~~~e~~~~~p~~g~vP~l~~~~~~~l~es~AI~~YLa~ 76 (76)
T PF02798_consen 39 KSPEFLAINPMFGKVPALEDGDGFVLTESNAILRYLAR 76 (76)
T ss_dssp GSHHHHHHTTTSSSSSEEEETTTEEEESHHHHHHHHHH
T ss_pred cchhhhhcccccceeeEEEECCCCEEEcHHHHHHHhCC
Confidence 45889999999 999999988 9999999999999985
No 80
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=99.04 E-value=1e-09 Score=72.98 Aligned_cols=69 Identities=16% Similarity=0.134 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHHHHHHh-hcC-----CCCccchHHHHHHHHHhc
Q 030554 87 ERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQLYAAVN-RFN-----LDMTQFPLLLRLHEAYSK 157 (175)
Q Consensus 87 ~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l~~~~~-~~~-----~~~~~~p~l~~~~~~~~~ 157 (175)
...+.......+.+..|++.|++ ++||+|+++|.+|+++++++..+.. ..+ ..+..+|+|.+|++||.+
T Consensus 60 ~~~~~~~~~a~~~l~~l~~~L~~--~~~~~Gd~~t~~D~~~~~~l~~~~~~~~~~~~l~~~~~~~pnL~~~~~ri~~ 134 (137)
T cd03212 60 EVEAEIYRDAKECLNLLSQRLGE--SQFFFGDTPTSLDALVFGYLAPLLKAPLPNNKLQNHLKQCPNLCRFCDRILS 134 (137)
T ss_pred hhHHHHHHHHHHHHHHHHHHHCC--CCcCCCCCCcHHHHHHHHHHHHHHhccCCChHHHHHHHHCcHHHHHHHHHHH
Confidence 34667778888999999999997 5999999999999999999987732 222 125679999999999985
No 81
>cd03044 GST_N_EF1Bgamma GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal TRX-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in prot
Probab=99.03 E-value=2.4e-10 Score=68.14 Aligned_cols=37 Identities=35% Similarity=0.509 Sum_probs=33.4
Q ss_pred CCcchhhhhCCCCccCeeec-CCcccccHHHHHHHHHH
Q 030554 2 FGLVDFLKINPIGYVPALVD-GDFVVSDSFAILMYLEE 38 (175)
Q Consensus 2 ~~~~~~~~~nP~~~vP~L~~-~g~~l~es~~I~~yL~~ 38 (175)
+++++|+++||.|+||+|++ +|.+|+||.+|++||++
T Consensus 37 ~~~~~~~~~nP~~~vP~L~~~~g~~l~es~aI~~yL~~ 74 (75)
T cd03044 37 NKTPEFLKKFPLGKVPAFEGADGFCLFESNAIAYYVAN 74 (75)
T ss_pred cCCHHHHHhCCCCCCCEEEcCCCCEEeeHHHHHHHHhh
Confidence 35678999999999999995 69999999999999975
No 82
>cd03053 GST_N_Phi GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Phi GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including t
Probab=99.02 E-value=2.4e-10 Score=68.26 Aligned_cols=37 Identities=46% Similarity=0.634 Sum_probs=33.9
Q ss_pred CcchhhhhCCCCccCeeecCCcccccHHHHHHHHHHh
Q 030554 3 GLVDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEK 39 (175)
Q Consensus 3 ~~~~~~~~nP~~~vP~L~~~g~~l~es~~I~~yL~~~ 39 (175)
++++|.++||.|+||+|+++|..++||.+|++||+++
T Consensus 40 ~~~~~~~~~P~~~vP~l~~~g~~l~es~aI~~yL~~~ 76 (76)
T cd03053 40 KSPEHLARNPFGQIPALEDGDLKLFESRAITRYLAEK 76 (76)
T ss_pred CCHHHHhhCCCCCCCEEEECCEEEEcHHHHHHHHhhC
Confidence 4578999999999999999999999999999999863
No 83
>cd03058 GST_N_Tau GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropionate herbicides. In addition, Tau GSTs play important roles in intracellular signalling, biosynthesis of anthocyanin,
Probab=99.02 E-value=3e-10 Score=67.51 Aligned_cols=38 Identities=24% Similarity=0.458 Sum_probs=34.6
Q ss_pred CcchhhhhCCC-CccCeeecCCcccccHHHHHHHHHHhC
Q 030554 3 GLVDFLKINPI-GYVPALVDGDFVVSDSFAILMYLEEKY 40 (175)
Q Consensus 3 ~~~~~~~~nP~-~~vP~L~~~g~~l~es~~I~~yL~~~~ 40 (175)
++++|+++||. |+||+|+++|.+++||.+|++||++++
T Consensus 36 ~~~~~~~~~p~~~~vP~l~~~~~~l~eS~aI~~yL~~~~ 74 (74)
T cd03058 36 KSELLLASNPVHKKIPVLLHNGKPICESLIIVEYIDEAW 74 (74)
T ss_pred CCHHHHHhCCCCCCCCEEEECCEEeehHHHHHHHHHhhC
Confidence 56789999996 999999999999999999999999864
No 84
>cd03047 GST_N_2 GST_N family, unknown subfamily 2; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The sequence from Burkholderia cepacia was identified as part of a gene cluster involved in the degradation of 2,4,5-trichlorophenoxyacetic acid. Some GSTs (e.g. Class Zeta and Delta) are known to catalyze dechlorination reactions.
Probab=99.02 E-value=2.2e-10 Score=67.91 Aligned_cols=35 Identities=54% Similarity=0.824 Sum_probs=32.4
Q ss_pred CcchhhhhCCCCccCeeecCCcccccHHHHHHHHH
Q 030554 3 GLVDFLKINPIGYVPALVDGDFVVSDSFAILMYLE 37 (175)
Q Consensus 3 ~~~~~~~~nP~~~vP~L~~~g~~l~es~~I~~yL~ 37 (175)
+.++|+++||+|+||+|+++|..|+||.+|++||+
T Consensus 39 ~~~~~~~~nP~~~vP~L~~~~~~l~eS~aI~~YL~ 73 (73)
T cd03047 39 DTPEFLAMNPNGRVPVLEDGDFVLWESNAILRYLA 73 (73)
T ss_pred cCHHHHhhCCCCCCCEEEECCEEEECHHHHHHHhC
Confidence 45789999999999999999999999999999984
No 85
>cd03045 GST_N_Delta_Epsilon GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.
Probab=99.00 E-value=2.9e-10 Score=67.47 Aligned_cols=36 Identities=53% Similarity=0.758 Sum_probs=33.2
Q ss_pred CcchhhhhCCCCccCeeecCCcccccHHHHHHHHHH
Q 030554 3 GLVDFLKINPIGYVPALVDGDFVVSDSFAILMYLEE 38 (175)
Q Consensus 3 ~~~~~~~~nP~~~vP~L~~~g~~l~es~~I~~yL~~ 38 (175)
+.++|+++||.|+||+|+++|..++||.+|++||++
T Consensus 39 ~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~~ 74 (74)
T cd03045 39 LKPEFLKLNPQHTVPTLVDNGFVLWESHAILIYLVE 74 (74)
T ss_pred CCHHHHhhCcCCCCCEEEECCEEEEcHHHHHHHHhC
Confidence 457899999999999999889999999999999974
No 86
>cd03076 GST_N_Pi GST_N family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an increase in JNK activity, thereby promoting apoptosis. GSTP1 is expressed in various tumors and is the predominant GST in a w
Probab=98.98 E-value=3.2e-10 Score=67.25 Aligned_cols=35 Identities=29% Similarity=0.332 Sum_probs=32.5
Q ss_pred cchhhhhCCCCccCeeecCCcccccHHHHHHHHHH
Q 030554 4 LVDFLKINPIGYVPALVDGDFVVSDSFAILMYLEE 38 (175)
Q Consensus 4 ~~~~~~~nP~~~vP~L~~~g~~l~es~~I~~yL~~ 38 (175)
.++++++||+|+||+|+++|..++||.+|++||++
T Consensus 38 ~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~~ 72 (73)
T cd03076 38 QESLKPKMLFGQLPCFKDGDLTLVQSNAILRHLGR 72 (73)
T ss_pred hhhhhccCCCCCCCEEEECCEEEEcHHHHHHHHhc
Confidence 45789999999999999999999999999999975
No 87
>cd03043 GST_N_1 GST_N family, unknown subfamily 1; composed of uncharacterized proteins, predominantly from bacteria, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=98.94 E-value=6e-10 Score=66.04 Aligned_cols=35 Identities=49% Similarity=0.706 Sum_probs=32.2
Q ss_pred CcchhhhhCCCCccCeeecCCcccccHHHHHHHHH
Q 030554 3 GLVDFLKINPIGYVPALVDGDFVVSDSFAILMYLE 37 (175)
Q Consensus 3 ~~~~~~~~nP~~~vP~L~~~g~~l~es~~I~~yL~ 37 (175)
+.++|+++||+|+||+|+++|.+++||.+|++||+
T Consensus 39 ~~~~~~~~nP~g~vP~L~~~g~~l~eS~aI~~YL~ 73 (73)
T cd03043 39 TRARILEFSPTGKVPVLVDGGIVVWDSLAICEYLA 73 (73)
T ss_pred ccHHHHhhCCCCcCCEEEECCEEEEcHHHHHHHhC
Confidence 34789999999999999999999999999999984
No 88
>cd03056 GST_N_4 GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=98.93 E-value=7.1e-10 Score=65.55 Aligned_cols=35 Identities=43% Similarity=0.597 Sum_probs=32.4
Q ss_pred CcchhhhhCCCCccCeeecCCcccccHHHHHHHHH
Q 030554 3 GLVDFLKINPIGYVPALVDGDFVVSDSFAILMYLE 37 (175)
Q Consensus 3 ~~~~~~~~nP~~~vP~L~~~g~~l~es~~I~~yL~ 37 (175)
+.++|+++||.|+||+|+++|..+.||.+|++||+
T Consensus 39 ~~~~~~~~~p~~~vP~l~~~~~~i~es~aI~~yl~ 73 (73)
T cd03056 39 RTPEFLALNPNGEVPVLELDGRVLAESNAILVYLA 73 (73)
T ss_pred CCHHHHHhCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 56789999999999999998999999999999984
No 89
>cd03042 GST_N_Zeta GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.
Probab=98.92 E-value=9.9e-10 Score=64.94 Aligned_cols=35 Identities=37% Similarity=0.607 Sum_probs=32.5
Q ss_pred CcchhhhhCCCCccCeeecCCcccccHHHHHHHHH
Q 030554 3 GLVDFLKINPIGYVPALVDGDFVVSDSFAILMYLE 37 (175)
Q Consensus 3 ~~~~~~~~nP~~~vP~L~~~g~~l~es~~I~~yL~ 37 (175)
+.++|+++||.++||+|+++|..++||.+|++||+
T Consensus 39 ~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~ 73 (73)
T cd03042 39 LSPAYRALNPQGLVPTLVIDGLVLTQSLAIIEYLD 73 (73)
T ss_pred CChHHHHhCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 45789999999999999999999999999999985
No 90
>cd03041 GST_N_2GST_N GST_N family, 2 repeats of the N-terminal domain of soluble GSTs (2 GST_N) subfamily; composed of uncharacterized proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=98.91 E-value=9.1e-10 Score=65.96 Aligned_cols=37 Identities=32% Similarity=0.345 Sum_probs=33.1
Q ss_pred cchhhhhCCCCccCeeec--CCcccccHHHHHHHHHHhC
Q 030554 4 LVDFLKINPIGYVPALVD--GDFVVSDSFAILMYLEEKY 40 (175)
Q Consensus 4 ~~~~~~~nP~~~vP~L~~--~g~~l~es~~I~~yL~~~~ 40 (175)
.++++++||.|+||+|++ +|..++||.+|++||++++
T Consensus 39 ~~~~~~~~p~~~vP~l~~~~~~~~l~es~~I~~yL~~~~ 77 (77)
T cd03041 39 RDKFLEKGGKVQVPYLVDPNTGVQMFESADIVKYLFKTY 77 (77)
T ss_pred HHHHHHhCCCCcccEEEeCCCCeEEEcHHHHHHHHHHhC
Confidence 467999999999999985 4789999999999999874
No 91
>cd03075 GST_N_Mu GST_N family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the most abundant GSTs in human liver, skeletal muscle and brain, and are believed to provide protection against diseases inc
Probab=98.90 E-value=1.1e-09 Score=66.32 Aligned_cols=29 Identities=34% Similarity=0.529 Sum_probs=27.5
Q ss_pred CCCccCeeecCCcccccHHHHHHHHHHhC
Q 030554 12 PIGYVPALVDGDFVVSDSFAILMYLEEKY 40 (175)
Q Consensus 12 P~~~vP~L~~~g~~l~es~~I~~yL~~~~ 40 (175)
|+|+||+|++||..|+||.||++||++++
T Consensus 54 P~g~vP~L~~~g~~l~ES~AIl~YLa~~~ 82 (82)
T cd03075 54 DFPNLPYYIDGDVKLTQSNAILRYIARKH 82 (82)
T ss_pred cCCCCCEEEECCEEEeehHHHHHHHhhcC
Confidence 99999999999999999999999999764
No 92
>cd03039 GST_N_Sigma_like GST_N family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition of platelet aggregation, bronchoconstriction, vasodilation and mediation of allergy and inflammation. Other class Sigma
Probab=98.88 E-value=1e-09 Score=64.84 Aligned_cols=34 Identities=32% Similarity=0.422 Sum_probs=31.3
Q ss_pred chhhhhCCCCccCeeecCCcccccHHHHHHHHHH
Q 030554 5 VDFLKINPIGYVPALVDGDFVVSDSFAILMYLEE 38 (175)
Q Consensus 5 ~~~~~~nP~~~vP~L~~~g~~l~es~~I~~yL~~ 38 (175)
.+|+++||+++||+|+++|..++||.+|++||++
T Consensus 39 ~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yL~~ 72 (72)
T cd03039 39 LDLKPTLPFGQLPVLEIDGKKLTQSNAILRYLAR 72 (72)
T ss_pred hhhccCCcCCCCCEEEECCEEEEecHHHHHHhhC
Confidence 3588999999999999999999999999999974
No 93
>cd03038 GST_N_etherase_LigE GST_N family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF.
Probab=98.87 E-value=2.2e-09 Score=65.37 Aligned_cols=33 Identities=52% Similarity=0.758 Sum_probs=31.0
Q ss_pred hhCCCCccCeeecC-CcccccHHHHHHHHHHhCC
Q 030554 9 KINPIGYVPALVDG-DFVVSDSFAILMYLEEKYP 41 (175)
Q Consensus 9 ~~nP~~~vP~L~~~-g~~l~es~~I~~yL~~~~~ 41 (175)
++||.++||+|+++ |..+.||.+|++||++++|
T Consensus 51 ~~~p~~~vP~L~~~~~~~l~eS~aI~~yL~~~~p 84 (84)
T cd03038 51 TSGGFYTVPVIVDGSGEVIGDSFAIAEYLEEAYP 84 (84)
T ss_pred cCCCCceeCeEEECCCCEEeCHHHHHHHHHHhCc
Confidence 78999999999987 8999999999999999875
No 94
>cd03049 GST_N_3 GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=98.85 E-value=2.2e-09 Score=63.53 Aligned_cols=35 Identities=40% Similarity=0.586 Sum_probs=32.1
Q ss_pred CcchhhhhCCCCccCeee-cCCcccccHHHHHHHHH
Q 030554 3 GLVDFLKINPIGYVPALV-DGDFVVSDSFAILMYLE 37 (175)
Q Consensus 3 ~~~~~~~~nP~~~vP~L~-~~g~~l~es~~I~~yL~ 37 (175)
+.++|+++||.++||+|+ ++|..+.||.+|++||+
T Consensus 38 ~~~~~~~~~p~~~vP~l~~~~g~~l~es~aI~~yLe 73 (73)
T cd03049 38 DDESLLAVNPLGKIPALVLDDGEALFDSRVICEYLD 73 (73)
T ss_pred CChHHHHhCCCCCCCEEEECCCCEEECHHHHHhhhC
Confidence 457899999999999998 68999999999999985
No 95
>cd03060 GST_N_Omega_like GST_N family, Omega-like subfamily; composed of uncharacterized proteins with similarity to class Omega GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. Like Omega enzymes, proteins in this subfamily contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a r
Probab=98.85 E-value=2.6e-09 Score=62.92 Aligned_cols=34 Identities=29% Similarity=0.481 Sum_probs=31.0
Q ss_pred CcchhhhhCCCCccCeeec-CCcccccHHHHHHHH
Q 030554 3 GLVDFLKINPIGYVPALVD-GDFVVSDSFAILMYL 36 (175)
Q Consensus 3 ~~~~~~~~nP~~~vP~L~~-~g~~l~es~~I~~yL 36 (175)
++++|+++||.|+||+|++ ||..++||.+|++|+
T Consensus 36 ~~~~~~~~np~~~vP~L~~~~g~~l~eS~aI~~y~ 70 (71)
T cd03060 36 KPAEMLAASPKGTVPVLVLGNGTVIEESLDIMRWA 70 (71)
T ss_pred CCHHHHHHCCCCCCCEEEECCCcEEecHHHHHHhh
Confidence 4578999999999999996 599999999999997
No 96
>cd03080 GST_N_Metaxin_like GST_N family, Metaxin subfamily, Metaxin-like proteins; a heterogenous group of proteins, predominantly uncharacterized, with similarity to metaxins and GSTs. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. One characterized member of this subgroup is a novel GST from Rhodococcus with toluene o-monooxygenase and gamma-glutamylcysteine synthetase activities. Also members are the cadmium-inducible lysosomal protein CDR-1 and its homologs from C. elegans, and the failed axon connections (fax) protein from Drosophila. CDR-1 is an integral membrane protein that functions to protect against cadmium toxicity and may also have a role in osmoregulation to maintain salt balance in C. ele
Probab=98.84 E-value=3.3e-09 Score=63.16 Aligned_cols=34 Identities=35% Similarity=0.370 Sum_probs=31.8
Q ss_pred hhhCCCCccCeeecCCcccccHHHHHHHHHHhCC
Q 030554 8 LKINPIGYVPALVDGDFVVSDSFAILMYLEEKYP 41 (175)
Q Consensus 8 ~~~nP~~~vP~L~~~g~~l~es~~I~~yL~~~~~ 41 (175)
.++||.|+||+|+++|..++||.+|++||+++|+
T Consensus 42 ~~~~p~g~vPvl~~~g~~l~eS~~I~~yL~~~~~ 75 (75)
T cd03080 42 AKRSPKGKLPFIELNGEKIADSELIIDHLEEKYG 75 (75)
T ss_pred ccCCCCCCCCEEEECCEEEcCHHHHHHHHHHHcC
Confidence 4789999999999999999999999999999874
No 97
>cd03051 GST_N_GTT2_like GST_N family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensitivity to heat shock.
Probab=98.79 E-value=4.5e-09 Score=62.14 Aligned_cols=35 Identities=46% Similarity=0.658 Sum_probs=31.8
Q ss_pred CcchhhhhCCCCccCeee-cCCcccccHHHHHHHHH
Q 030554 3 GLVDFLKINPIGYVPALV-DGDFVVSDSFAILMYLE 37 (175)
Q Consensus 3 ~~~~~~~~nP~~~vP~L~-~~g~~l~es~~I~~yL~ 37 (175)
+.++|.++||.++||+|+ ++|..++||.+|++||+
T Consensus 39 ~~~~~~~~~p~~~vP~l~~~~~~~l~es~aI~~yLe 74 (74)
T cd03051 39 RSPEFLAKNPAGTVPVLELDDGTVITESVAICRYLE 74 (74)
T ss_pred CCHHHHhhCCCCCCCEEEeCCCCEEecHHHHHHHhC
Confidence 456899999999999999 68899999999999985
No 98
>cd03077 GST_N_Alpha GST_N family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Alpha subfamily is composed of eukaryotic GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GSTA3-3 catalyzes the isomerization of intermediates in steroid hormone biosynthesis. GSTA4-4 preferentially catalyzes the
Probab=98.79 E-value=5.9e-09 Score=62.71 Aligned_cols=30 Identities=27% Similarity=0.340 Sum_probs=28.3
Q ss_pred CCCccCeeecCCcccccHHHHHHHHHHhCC
Q 030554 12 PIGYVPALVDGDFVVSDSFAILMYLEEKYP 41 (175)
Q Consensus 12 P~~~vP~L~~~g~~l~es~~I~~yL~~~~~ 41 (175)
|+|+||+|++||..|+||.||++||+++++
T Consensus 48 ~~g~vP~L~~~g~~l~ES~AI~~YL~~~~~ 77 (79)
T cd03077 48 MFQQVPMVEIDGMKLVQTRAILNYIAGKYN 77 (79)
T ss_pred CCCCCCEEEECCEEEeeHHHHHHHHHHHcC
Confidence 599999999999999999999999999986
No 99
>cd03055 GST_N_Omega GST_N family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a redox active residue capable of reducing GSH mixed disulfides in a monothiol mechanism. Polymorphisms of the class Omega
Probab=98.67 E-value=1.6e-08 Score=62.30 Aligned_cols=35 Identities=43% Similarity=0.451 Sum_probs=31.3
Q ss_pred CcchhhhhCCCCccCeeecC-CcccccHHHHHHHHH
Q 030554 3 GLVDFLKINPIGYVPALVDG-DFVVSDSFAILMYLE 37 (175)
Q Consensus 3 ~~~~~~~~nP~~~vP~L~~~-g~~l~es~~I~~yL~ 37 (175)
++++|+++||.++||+|+++ |..+.||.+|++||+
T Consensus 54 ~~~~~~~~np~~~vPvL~~~~g~~l~eS~aI~~yLe 89 (89)
T cd03055 54 KPDWFLEKNPQGKVPALEIDEGKVVYESLIICEYLD 89 (89)
T ss_pred CcHHHHhhCCCCCcCEEEECCCCEEECHHHHHHhhC
Confidence 34679999999999999965 899999999999985
No 100
>cd03079 GST_N_Metaxin2 GST_N family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=98.63 E-value=2.8e-08 Score=58.64 Aligned_cols=31 Identities=32% Similarity=0.489 Sum_probs=28.3
Q ss_pred hhCCCCccCeeecCCcccccHHHHHHHHHHh
Q 030554 9 KINPIGYVPALVDGDFVVSDSFAILMYLEEK 39 (175)
Q Consensus 9 ~~nP~~~vP~L~~~g~~l~es~~I~~yL~~~ 39 (175)
..+|.|+||+|++||.+|+||.+|+.||.++
T Consensus 44 ~~~P~GkVP~L~~dg~vI~eS~aIl~yL~~~ 74 (74)
T cd03079 44 FMSPSGKVPFIRVGNQIVSEFGPIVQFVEAK 74 (74)
T ss_pred ccCCCCcccEEEECCEEEeCHHHHHHHHhcC
Confidence 3789999999999999999999999999863
No 101
>cd03037 GST_N_GRX2 GST_N family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD, compared with other GRXs which are 9-12kD in size. GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=98.48 E-value=1e-07 Score=55.95 Aligned_cols=33 Identities=18% Similarity=0.356 Sum_probs=29.0
Q ss_pred hhhhhCCCCccCeeecC-CcccccHHHHHHHHHH
Q 030554 6 DFLKINPIGYVPALVDG-DFVVSDSFAILMYLEE 38 (175)
Q Consensus 6 ~~~~~nP~~~vP~L~~~-g~~l~es~~I~~yL~~ 38 (175)
..++.||.++||+|+++ |..++||.+|++||++
T Consensus 38 ~~~~~~~~~~vP~L~~~~~~~l~es~aI~~yL~~ 71 (71)
T cd03037 38 TPIRMIGAKQVPILEKDDGSFMAESLDIVAFIDE 71 (71)
T ss_pred HHHHhcCCCccCEEEeCCCeEeehHHHHHHHHhC
Confidence 34678999999999954 8999999999999974
No 102
>cd03040 GST_N_mPGES2 GST_N family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated, and a C-terminal soluble domain with a GST-like structure.
Probab=98.43 E-value=2.3e-07 Score=55.32 Aligned_cols=33 Identities=24% Similarity=0.180 Sum_probs=29.1
Q ss_pred hhhCCCCccCeeecC----CcccccHHHHHHHHHHhC
Q 030554 8 LKINPIGYVPALVDG----DFVVSDSFAILMYLEEKY 40 (175)
Q Consensus 8 ~~~nP~~~vP~L~~~----g~~l~es~~I~~yL~~~~ 40 (175)
++.||.++||+|+++ |.+|.||.+|++||++..
T Consensus 40 ~~~~~~~~vP~l~~~~~~~~~~l~eS~~I~~yL~~~~ 76 (77)
T cd03040 40 IKWSSYKKVPILRVESGGDGQQLVDSSVIISTLKTYL 76 (77)
T ss_pred HHHhCCCccCEEEECCCCCccEEEcHHHHHHHHHHHc
Confidence 467999999999944 899999999999999864
No 103
>cd03054 GST_N_Metaxin GST_N family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities.
Probab=98.43 E-value=2e-07 Score=54.95 Aligned_cols=31 Identities=32% Similarity=0.384 Sum_probs=28.7
Q ss_pred hhCCCCccCeeecCCcccccHHHHHHHHHHh
Q 030554 9 KINPIGYVPALVDGDFVVSDSFAILMYLEEK 39 (175)
Q Consensus 9 ~~nP~~~vP~L~~~g~~l~es~~I~~yL~~~ 39 (175)
.+||.|+||+|+++|..+.||.+|++||+++
T Consensus 42 ~~~p~g~vP~l~~~g~~l~es~~I~~yL~~~ 72 (72)
T cd03054 42 WRSPTGKLPFLELNGEKIADSEKIIEYLKKK 72 (72)
T ss_pred ccCCCcccCEEEECCEEEcCHHHHHHHHhhC
Confidence 4799999999999999999999999999874
No 104
>cd00570 GST_N_family Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK subfamily, a member of the DsbA family). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical doma
Probab=98.33 E-value=4.4e-07 Score=52.49 Aligned_cols=32 Identities=53% Similarity=0.991 Sum_probs=29.7
Q ss_pred hhhhhCCCCccCeeecCCcccccHHHHHHHHH
Q 030554 6 DFLKINPIGYVPALVDGDFVVSDSFAILMYLE 37 (175)
Q Consensus 6 ~~~~~nP~~~vP~L~~~g~~l~es~~I~~yL~ 37 (175)
++.+++|.+++|+|.++|..+.||.+|++||+
T Consensus 40 ~~~~~~~~~~~P~l~~~~~~~~es~~I~~yl~ 71 (71)
T cd00570 40 EFLALNPLGKVPVLEDGGLVLTESLAILEYLA 71 (71)
T ss_pred HHHhcCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 47889999999999988999999999999984
No 105
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=98.32 E-value=7.1e-06 Score=53.81 Aligned_cols=68 Identities=19% Similarity=0.188 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHHHHHHhhcCCCCccchHHHHHHHHHhcChhhh
Q 030554 90 IWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQ 162 (175)
Q Consensus 90 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~ 162 (175)
.....+++..|..||.++.. +--.+.++|+-||.+|+.|+.+...-|+.+. |+|++|+++|.+...+.
T Consensus 58 ~~~i~~l~~~L~~Le~ll~~---~~~~n~~LS~dDi~lFp~LR~Ltivkgi~~P--~~V~~Y~~~~s~~t~V~ 125 (132)
T PF04399_consen 58 PELIAELNADLEELEPLLAS---PNAVNGELSIDDIILFPILRSLTIVKGIQWP--PKVRAYMDRMSKATGVP 125 (132)
T ss_dssp HHHHHHHHHHHHHHHHH-SC---TTBTTSS--HHHHHHHHHHHHHCTCTTS-----HHHHHHHHHHHHHHT--
T ss_pred HHHHHHHHHHHHHHHHHhcc---ccccCCCCCHHHHHHHHHHhhhhhccCCcCC--HHHHHHHHHHHHHcCCC
Confidence 45557778888888888875 3333448999999999999999444455554 89999999999876654
No 106
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=98.16 E-value=8.2e-06 Score=53.09 Aligned_cols=66 Identities=18% Similarity=0.127 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHHHHHHhhcCCCCccchHHHHHHHHHhcChhh
Q 030554 91 WAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAF 161 (175)
Q Consensus 91 ~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~ 161 (175)
....+++..|..|+.++.. +-.++..+|+-|+.+|++|+.+...-|..+. |+|++|+++|.+...+
T Consensus 60 ~~i~~l~~~L~~l~~ll~~---~~~~n~~ls~DDi~lFp~LR~Lt~vkgi~~P--~~V~~Y~~~~s~~t~V 125 (128)
T cd03199 60 QYIAALNALLEELDPLILS---SEAVNGQLSTDDIILFPILRNLTLVKGLVFP--PKVKAYLERMSALTKV 125 (128)
T ss_pred HHHHHHHHHHHHHHHHHcC---ccccCCcCCHHHHHHHHHHhhhhhhcCCCCC--HHHHHHHHHHHHHhCC
Confidence 4556788888888888854 2234568999999999999999555555554 8999999999987654
No 107
>cd03078 GST_N_Metaxin1_like GST_N family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins including Tom37 from fungi. Mammalian metaxin (or metaxin 1) and the fungal protein Tom37 are components of preprotein import complexes of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals.
Probab=97.94 E-value=9.8e-06 Score=47.83 Aligned_cols=31 Identities=29% Similarity=0.452 Sum_probs=28.3
Q ss_pred hhCCCCccCeeecCCcccccHHHHHHHHHHh
Q 030554 9 KINPIGYVPALVDGDFVVSDSFAILMYLEEK 39 (175)
Q Consensus 9 ~~nP~~~vP~L~~~g~~l~es~~I~~yL~~~ 39 (175)
..+|.|++|+|+++|+.+.||..|++||.++
T Consensus 42 ~~sp~gkLP~l~~~~~~i~d~~~Ii~~L~~~ 72 (73)
T cd03078 42 WRSPTGKLPALLTSGTKISGPEKIIEYLRKQ 72 (73)
T ss_pred CCCCCCccCEEEECCEEecChHHHHHHHHHc
Confidence 4678999999999999999999999999875
No 108
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=97.58 E-value=4.6e-05 Score=60.21 Aligned_cols=117 Identities=14% Similarity=0.136 Sum_probs=78.2
Q ss_pred cCCcccccHHHHHHHHHHhCC-CCCCCCccHHHHHHHHHHHHHHhccccchhHHHHHHHhhhccCchHHHHHHHHHHHHH
Q 030554 21 DGDFVVSDSFAILMYLEEKYP-QPPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKG 99 (175)
Q Consensus 21 ~~g~~l~es~~I~~yL~~~~~-~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (175)
.+|..+..+..+..|..+... .+.+++.+ .++.+++.|+++... .....+...
T Consensus 43 ~d~~~l~~a~~~~~~~~~~~~~~~~lf~~~-~d~~~vd~w~~~s~~-------------------------~~~~~~s~~ 96 (712)
T KOG1147|consen 43 LDGRKLNGATEPVVYSAALAKADPKLFGNN-IDRSQVDHWVSFSST-------------------------FSFDEISSS 96 (712)
T ss_pred cccccccCCccchhhhhhhcccCHhHcCCc-ccHHHHHHHHHHhhh-------------------------cchHHHHHH
Confidence 456666677777777664432 23477766 788999999988654 112446677
Q ss_pred HHHHHHHHhhcCCCcccCCCccHHHHHhHHHHHHHHhhcC-CC-CccchHHHHHHHHHhcChhhhhhC
Q 030554 100 FAALEKLLKDYAGKYATGDEVFLADLYLAPQLYAAVNRFN-LD-MTQFPLLLRLHEAYSKLPAFQNAA 165 (175)
Q Consensus 100 l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l~~~~~~~~-~~-~~~~p~l~~~~~~~~~~~~~~~~~ 165 (175)
+..|+..|.-+ .||+|.++|+||+++|+.|..--.... .- -..+.++.+|++-....++.+.++
T Consensus 97 ~~~ld~~l~~~--t~lvg~sls~Ad~aiw~~l~~n~~~~~~lk~~k~~~~v~Rw~~~~~~~~a~~~v~ 162 (712)
T KOG1147|consen 97 LSELDKFLVLR--TFLVGNSLSIADFAIWGALHSNGMRQEQLKAKKDYQNVERWYDLPEFQEAHNKVL 162 (712)
T ss_pred HHHHHhhhhHH--HHhhccchhHHHHHHHHHHhcccchHHHHHhhCCchhhhhhcCcHhHHHHHHHHH
Confidence 88888888774 899999999999999999976411111 11 235678899998544444444444
No 109
>PF10568 Tom37: Outer mitochondrial membrane transport complex protein; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=96.76 E-value=0.0016 Score=38.24 Aligned_cols=29 Identities=41% Similarity=0.598 Sum_probs=26.2
Q ss_pred hhCCCCccCeeec-CCcccccHHHHHHHHH
Q 030554 9 KINPIGYVPALVD-GDFVVSDSFAILMYLE 37 (175)
Q Consensus 9 ~~nP~~~vP~L~~-~g~~l~es~~I~~yL~ 37 (175)
.++|.|++|+|.+ +++.+.+-..|++||.
T Consensus 43 ~~Sptg~LP~L~~~~~~~vsg~~~Iv~yL~ 72 (72)
T PF10568_consen 43 WLSPTGELPALIDSGGTWVSGFRNIVEYLR 72 (72)
T ss_pred CcCCCCCCCEEEECCCcEEECHHHHHHhhC
Confidence 4679999999997 9999999999999983
No 110
>TIGR02190 GlrX-dom Glutaredoxin-family domain. This C-terminal domain with homology to glutaredoxin is fused to an N-terminal peroxiredoxin-like domain.
Probab=95.49 E-value=0.013 Score=34.94 Aligned_cols=32 Identities=19% Similarity=0.258 Sum_probs=28.8
Q ss_pred hhhhhCCCCccCeeecCCcccccHHHHHHHHH
Q 030554 6 DFLKINPIGYVPALVDGDFVVSDSFAILMYLE 37 (175)
Q Consensus 6 ~~~~~nP~~~vP~L~~~g~~l~es~~I~~yL~ 37 (175)
++.++++..+||++..||..+.++..|.+||+
T Consensus 48 ~~~~~~g~~~vP~i~i~g~~igG~~~l~~~l~ 79 (79)
T TIGR02190 48 SLRAVTGATTVPQVFIGGKLIGGSDELEAYLA 79 (79)
T ss_pred HHHHHHCCCCcCeEEECCEEEcCHHHHHHHhC
Confidence 46677889999999999999999999999984
No 111
>PF11801 Tom37_C: Tom37 C-terminal domain; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=93.84 E-value=0.35 Score=33.31 Aligned_cols=39 Identities=23% Similarity=0.233 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHhhc-CCCcccCCC-ccHHHHHhHHHHHHH
Q 030554 96 IGKGFAALEKLLKDY-AGKYATGDE-VFLADLYLAPQLYAA 134 (175)
Q Consensus 96 ~~~~l~~le~~L~~~-~~~~l~G~~-~t~aD~~~~~~l~~~ 134 (175)
-.+.+..|++.|+.. ..+|++|+. +|-.||.+++.|.-+
T Consensus 113 a~~~l~~L~~~L~~~~~~~~~f~~~~psslD~L~~ayL~l~ 153 (168)
T PF11801_consen 113 AMECLSLLEELLGEWEEARYFFGDSKPSSLDCLAFAYLALL 153 (168)
T ss_pred HHHHHHHHHHHHhhccccccccCCCCCCHHHHHHHHHHHHH
Confidence 456777888998862 238888876 999999999999866
No 112
>cd03029 GRX_hybridPRX5 Glutaredoxin (GRX) family, PRX5 hybrid subfamily; composed of hybrid proteins containing peroxiredoxin (PRX) and GRX domains, which is found in some pathogenic bacteria and cyanobacteria. PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins. PRX-GRX hybrid proteins from Haemophilus influenza and Neisseria meningitis exhibit GSH-dependent peroxidase activity. The flow of reducing equivalents in the catalytic cycle of the hybrid protein goes from NADPH - GSH reductase - GSH - GRX domain of hybrid - PRX domain of hybrid - peroxide substrate.
Probab=93.21 E-value=0.1 Score=30.26 Aligned_cols=31 Identities=13% Similarity=0.127 Sum_probs=26.8
Q ss_pred hhhhCCCCccCeeecCCcccccHHHHHHHHH
Q 030554 7 FLKINPIGYVPALVDGDFVVSDSFAILMYLE 37 (175)
Q Consensus 7 ~~~~nP~~~vP~L~~~g~~l~es~~I~~yL~ 37 (175)
+...+...+||++..||..+.++..|.+||+
T Consensus 42 ~~~~~g~~~vP~ifi~g~~igg~~~l~~~l~ 72 (72)
T cd03029 42 LRAVTGAMTVPQVFIDGELIGGSDDLEKYFA 72 (72)
T ss_pred HHHHhCCCCcCeEEECCEEEeCHHHHHHHhC
Confidence 4455677899999999999999999999984
No 113
>PRK10638 glutaredoxin 3; Provisional
Probab=92.60 E-value=0.13 Score=30.73 Aligned_cols=34 Identities=9% Similarity=0.026 Sum_probs=29.0
Q ss_pred chhhhhCCCCccCeeecCCcccccHHHHHHHHHH
Q 030554 5 VDFLKINPIGYVPALVDGDFVVSDSFAILMYLEE 38 (175)
Q Consensus 5 ~~~~~~nP~~~vP~L~~~g~~l~es~~I~~yL~~ 38 (175)
+++.+++|..+||+|..||..+.....+..+-.+
T Consensus 42 ~~l~~~~g~~~vP~i~~~g~~igG~~~~~~~~~~ 75 (83)
T PRK10638 42 EEMIKRSGRTTVPQIFIDAQHIGGCDDLYALDAR 75 (83)
T ss_pred HHHHHHhCCCCcCEEEECCEEEeCHHHHHHHHHc
Confidence 5678999999999999999999999888776543
No 114
>TIGR02196 GlrX_YruB Glutaredoxin-like protein, YruB-family. This glutaredoxin-like protein family contains the conserved CxxC motif and includes the Clostridium pasteurianum protein YruB which has been cloned from a rubredoxin operon. Somewhat related to NrdH, it is unknown whether this protein actually interacts with glutathione/glutathione reducatase, or, like NrdH, some other reductant system.
Probab=91.72 E-value=0.2 Score=28.61 Aligned_cols=31 Identities=26% Similarity=0.268 Sum_probs=24.2
Q ss_pred hhhhhCCCCccCeeecCCccc--ccHHHHHHHH
Q 030554 6 DFLKINPIGYVPALVDGDFVV--SDSFAILMYL 36 (175)
Q Consensus 6 ~~~~~nP~~~vP~L~~~g~~l--~es~~I~~yL 36 (175)
++.+.++...||+|..+|..+ .++..|.++|
T Consensus 41 ~~~~~~~~~~vP~~~~~~~~~~g~~~~~i~~~i 73 (74)
T TIGR02196 41 EVLKVLGQRGVPVIVIGHKIIVGFDPEKLDQLL 73 (74)
T ss_pred HHHHHhCCCcccEEEECCEEEeeCCHHHHHHHh
Confidence 467889999999999878777 5666666665
No 115
>cd02066 GRX_family Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including human GRX1 and GRX2, as well as E. coli GRX1 and GRX3, which
Probab=90.03 E-value=0.31 Score=27.54 Aligned_cols=31 Identities=6% Similarity=0.026 Sum_probs=26.6
Q ss_pred chhhhhCCCCccCeeecCCcccccHHHHHHH
Q 030554 5 VDFLKINPIGYVPALVDGDFVVSDSFAILMY 35 (175)
Q Consensus 5 ~~~~~~nP~~~vP~L~~~g~~l~es~~I~~y 35 (175)
+++.++++..++|++..||..+.++..|.+.
T Consensus 40 ~~l~~~~~~~~~P~~~~~~~~igg~~~~~~~ 70 (72)
T cd02066 40 EELKELSGWPTVPQIFINGEFIGGYDDLKAL 70 (72)
T ss_pred HHHHHHhCCCCcCEEEECCEEEecHHHHHHh
Confidence 4567889999999999999999999888764
No 116
>PF11287 DUF3088: Protein of unknown function (DUF3088); InterPro: IPR021439 This family of proteins with unknown function appears to be restricted to Proteobacteria.
Probab=89.66 E-value=0.49 Score=30.06 Aligned_cols=28 Identities=32% Similarity=0.444 Sum_probs=23.4
Q ss_pred CccCeee-cCCc-------------ccccHHHHHHHHHHhCC
Q 030554 14 GYVPALV-DGDF-------------VVSDSFAILMYLEEKYP 41 (175)
Q Consensus 14 ~~vP~L~-~~g~-------------~l~es~~I~~yL~~~~~ 41 (175)
..+|+|+ .+|. .|.|+..|++||.++|+
T Consensus 67 QslPvLVL~~~~~~~~~~~~~~~~rfi~d~~~I~~~La~r~g 108 (112)
T PF11287_consen 67 QSLPVLVLADGAPSPDDAGSHGGRRFIDDPRRILRYLAERHG 108 (112)
T ss_pred cCCCEEEeCCCCCCcccccccCCeEEeCCHHHHHHHHHHHcC
Confidence 4579998 5554 78999999999999987
No 117
>PF09635 MetRS-N: MetRS-N binding domain; InterPro: IPR018285 This entry represents the N-terminal domain of methionyl-tRNA synthetase (MetRS). This N-terminal appended domain mediates non-catalytic complex formation through its interaction with a domain in the tRNA aminoacylation cofactor Arc1p. The interacting domains of MetRS, GluRS (glutamyl-tRNA synthetase) and Arc1p form a ternary complex resembling a classical GST homo-dimer []. Domain-swapping between symmetrically related MetRS-N and Arc1p-N domains generates a 2:2 tetramer held together by van der Waals forces. This domain is necessary for formation of the aminoacyl-tRNA synthetase complex necessary for tRNA nuclear export and shuttling as part of the translational apparatus. ; PDB: 2HSN_A.
Probab=88.86 E-value=2.5 Score=27.36 Aligned_cols=34 Identities=26% Similarity=0.392 Sum_probs=16.7
Q ss_pred hhhCCCCccCeee--cCCcccccHHHHHHHHHHhCC
Q 030554 8 LKINPIGYVPALV--DGDFVVSDSFAILMYLEEKYP 41 (175)
Q Consensus 8 ~~~nP~~~vP~L~--~~g~~l~es~~I~~yL~~~~~ 41 (175)
+++|.-..-|.|. -+|..+.|+.||++|+..-|.
T Consensus 28 ~~v~ed~~~~~L~~~~~gF~L~e~NAIvrYl~nDF~ 63 (122)
T PF09635_consen 28 LEVNEDESGPLLKDKKSGFELFEPNAIVRYLANDFE 63 (122)
T ss_dssp -EE-SS--S--EEE-S--S----HHHHHHHHTT--T
T ss_pred eeeCCccccceeeecCCceEEecccHHHHHHHhhcC
Confidence 3567777779995 568999999999999998764
No 118
>cd02976 NrdH NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile. In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, cou
Probab=88.55 E-value=0.29 Score=27.82 Aligned_cols=23 Identities=35% Similarity=0.395 Sum_probs=18.9
Q ss_pred chhhhhCCCCccCeeecCCcccc
Q 030554 5 VDFLKINPIGYVPALVDGDFVVS 27 (175)
Q Consensus 5 ~~~~~~nP~~~vP~L~~~g~~l~ 27 (175)
++|.++||.+++|+|.++|..+.
T Consensus 40 ~~~~~~~~~~~vP~i~~~~~~i~ 62 (73)
T cd02976 40 EELKKLNGYRSVPVVVIGDEHLS 62 (73)
T ss_pred HHHHHHcCCcccCEEEECCEEEe
Confidence 46788999999999998776654
No 119
>TIGR02183 GRXA Glutaredoxin, GrxA family. This model includes the E. coli glyutaredoxin GrxA which appears to have primary responsibility for the reduction of ribonucleotide reductase.
Probab=84.72 E-value=1.4 Score=26.45 Aligned_cols=28 Identities=14% Similarity=0.194 Sum_probs=25.4
Q ss_pred CccCeeecCCcccccHHHHHHHHHHhCC
Q 030554 14 GYVPALVDGDFVVSDSFAILMYLEEKYP 41 (175)
Q Consensus 14 ~~vP~L~~~g~~l~es~~I~~yL~~~~~ 41 (175)
..||++..||..+..+..|..|+.+.++
T Consensus 56 ~tVP~ifi~g~~igG~~dl~~~~~~~~~ 83 (86)
T TIGR02183 56 ETVPQIFVDEKHVGGCTDFEQLVKENFD 83 (86)
T ss_pred CCcCeEEECCEEecCHHHHHHHHHhccc
Confidence 6899999999999999999999988764
No 120
>TIGR02200 GlrX_actino Glutaredoxin-like protein. This family of glutaredoxin-like proteins is limited to the Actinobacteria and contains the conserved CxxC motif.
Probab=82.18 E-value=1.4 Score=25.39 Aligned_cols=31 Identities=13% Similarity=0.145 Sum_probs=21.4
Q ss_pred hhhhhC-CCCccCeee-cCCcccccH--HHHHHHH
Q 030554 6 DFLKIN-PIGYVPALV-DGDFVVSDS--FAILMYL 36 (175)
Q Consensus 6 ~~~~~n-P~~~vP~L~-~~g~~l~es--~~I~~yL 36 (175)
++.++| +...||++. ++|..+.++ ..|+.+|
T Consensus 41 ~~~~~~~~~~~vP~i~~~~g~~l~~~~~~~~~~~l 75 (77)
T TIGR02200 41 RVVSVNNGNMTVPTVKFADGSFLTNPSAAQVKAKL 75 (77)
T ss_pred HHHHHhCCCceeCEEEECCCeEecCCCHHHHHHHh
Confidence 456777 999999997 777776543 4445444
No 121
>cd03027 GRX_DEP Glutaredoxin (GRX) family, Dishevelled, Egl-10, and Pleckstrin (DEP) subfamily; composed of uncharacterized proteins containing a GRX domain and additional domains DEP and DUF547, both of which have unknown functions. GRX is a glutathione (GSH) dependent reductase containing a redox active CXXC motif in a TRX fold. It has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. By altering the redox state of target proteins, GRX is involved in many cellular functions.
Probab=81.54 E-value=1.6 Score=25.16 Aligned_cols=30 Identities=10% Similarity=0.076 Sum_probs=24.3
Q ss_pred chhhhhCCCCccCeeecCCcccccHHHHHH
Q 030554 5 VDFLKINPIGYVPALVDGDFVVSDSFAILM 34 (175)
Q Consensus 5 ~~~~~~nP~~~vP~L~~~g~~l~es~~I~~ 34 (175)
+++.++++..++|++..||..|..-..+.+
T Consensus 41 ~el~~~~g~~~vP~v~i~~~~iGg~~~~~~ 70 (73)
T cd03027 41 AELEERTGSSVVPQIFFNEKLVGGLTDLKS 70 (73)
T ss_pred HHHHHHhCCCCcCEEEECCEEEeCHHHHHh
Confidence 468889999999999999988876655543
No 122
>PRK11200 grxA glutaredoxin 1; Provisional
Probab=80.84 E-value=2.3 Score=25.31 Aligned_cols=28 Identities=14% Similarity=0.194 Sum_probs=25.4
Q ss_pred CccCeeecCCcccccHHHHHHHHHHhCC
Q 030554 14 GYVPALVDGDFVVSDSFAILMYLEEKYP 41 (175)
Q Consensus 14 ~~vP~L~~~g~~l~es~~I~~yL~~~~~ 41 (175)
..||++..||..+.....|..++...++
T Consensus 57 ~~vP~ifi~g~~igg~~~~~~~~~~~~~ 84 (85)
T PRK11200 57 ETVPQIFVDQKHIGGCTDFEAYVKENLG 84 (85)
T ss_pred CcCCEEEECCEEEcCHHHHHHHHHHhcc
Confidence 5899999999999999999999988764
No 123
>KOG1668 consensus Elongation factor 1 beta/delta chain [Transcription]
Probab=78.73 E-value=2.8 Score=30.28 Aligned_cols=59 Identities=17% Similarity=0.140 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHHHHHHhhcCCCCccchHHHHHHHHHhcChhhh
Q 030554 97 GKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQ 162 (175)
Q Consensus 97 ~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~ 162 (175)
...+..++..|.+ ++|.-|.+++-.|+.+|..+.- .+ .-..+++..+||..+.++..+.
T Consensus 10 ~~glk~l~~sLA~--ks~~~g~~~s~edv~vf~al~~----ep-~s~~~v~~~~w~~~l~a~~~~~ 68 (231)
T KOG1668|consen 10 PAGLKKLNKSLAE--KSYIEGYQLSKEDVVVFAALGV----EP-QSARLVNAERWYSKLEALLRLL 68 (231)
T ss_pred hhhhhhhhHhhhc--ccCCCCCCcccccceeehhccc----Cc-chhhhhHHHHHHHHHHHHHHHH
Confidence 5678889999987 5999999999999999866521 11 1245677888888887765554
No 124
>cd03418 GRX_GRXb_1_3_like Glutaredoxin (GRX) family, GRX bacterial class 1 and 3 (b_1_3)-like subfamily; composed of bacterial GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known i
Probab=75.60 E-value=3.3 Score=23.75 Aligned_cols=31 Identities=13% Similarity=0.138 Sum_probs=23.8
Q ss_pred hhhhCCCC-ccCeeecCCcccccHHHHHHHHH
Q 030554 7 FLKINPIG-YVPALVDGDFVVSDSFAILMYLE 37 (175)
Q Consensus 7 ~~~~nP~~-~vP~L~~~g~~l~es~~I~~yL~ 37 (175)
+++..... +||++..+|..+.....+.++-.
T Consensus 42 ~~~~~~~~~~vP~v~i~g~~igg~~~~~~~~~ 73 (75)
T cd03418 42 MINRSGGRRTVPQIFIGDVHIGGCDDLYALER 73 (75)
T ss_pred HHHHhCCCCccCEEEECCEEEeChHHHHHHHh
Confidence 44444544 89999999999999988887654
No 125
>TIGR02181 GRX_bact Glutaredoxin, GrxC family. This family of glutaredoxins includes the E. coli protein GrxC (Grx3) which appears to have a secondary role in reducing ribonucleotide reductase (in the absence of GrxA) possibly indicating a role in the reduction of other protein disulfides.
Probab=74.58 E-value=3.8 Score=23.89 Aligned_cols=33 Identities=18% Similarity=0.212 Sum_probs=27.0
Q ss_pred hhhhhCCCCccCeeecCCcccccHHHHHHHHHH
Q 030554 6 DFLKINPIGYVPALVDGDFVVSDSFAILMYLEE 38 (175)
Q Consensus 6 ~~~~~nP~~~vP~L~~~g~~l~es~~I~~yL~~ 38 (175)
++.+.+....||++..+|..+.....+..+..+
T Consensus 40 ~~~~~~g~~~vP~i~i~g~~igg~~~~~~~~~~ 72 (79)
T TIGR02181 40 EMMQRSGRRTVPQIFIGDVHVGGCDDLYALDRE 72 (79)
T ss_pred HHHHHhCCCCcCEEEECCEEEcChHHHHHHHHc
Confidence 466677789999999999999988888777654
No 126
>KOG0079 consensus GTP-binding protein H-ray, small G protein superfamily [General function prediction only]
Probab=74.27 E-value=2.7 Score=28.38 Aligned_cols=34 Identities=15% Similarity=0.142 Sum_probs=28.8
Q ss_pred CccchHHHHHHHHHhc-ChhhhhhCCcCCCCCCCC
Q 030554 142 MTQFPLLLRLHEAYSK-LPAFQNAAPEKQPDAPSS 175 (175)
Q Consensus 142 ~~~~p~l~~~~~~~~~-~~~~~~~~~~~~~~~p~~ 175 (175)
-+.|.++++|++.+++ .|++.+++-.+..|.|.+
T Consensus 93 ~ESF~Nv~rWLeei~~ncdsv~~vLVGNK~d~~~R 127 (198)
T KOG0079|consen 93 GESFNNVKRWLEEIRNNCDSVPKVLVGNKNDDPER 127 (198)
T ss_pred hhhhHhHHHHHHHHHhcCccccceecccCCCCccc
Confidence 3678999999999988 788999998888888763
No 127
>TIGR02681 phage_pRha phage regulatory protein, rha family. Members of this protein family are found in temperate phage and bacterial prophage regions. Members include the product of the rha gene of the lambdoid phage phi-80, a late operon gene. The presence of this gene interferes with infection of bacterial strains that lack integration host factor (IHF), which regulates the rha gene. It is suggested that pRha is a phage regulatory protein.
Probab=72.59 E-value=3.1 Score=26.44 Aligned_cols=26 Identities=19% Similarity=0.365 Sum_probs=22.4
Q ss_pred cCeee-cCCcccccHHHHHHHHHHhCC
Q 030554 16 VPALV-DGDFVVSDSFAILMYLEEKYP 41 (175)
Q Consensus 16 vP~L~-~~g~~l~es~~I~~yL~~~~~ 41 (175)
+|.+. .+|.++++|..|++++.+.|.
T Consensus 2 ~~~v~~~~~~~~ttS~~IAe~fgK~H~ 28 (108)
T TIGR02681 2 FPKVFTKRNQVVTDSLTMAQMFGKRHD 28 (108)
T ss_pred CceEEEECCEEEEeHHHHHHHHCcchH
Confidence 46666 899999999999999999875
No 128
>cd03419 GRX_GRXh_1_2_like Glutaredoxin (GRX) family, GRX human class 1 and 2 (h_1_2)-like subfamily; composed of proteins similar to human GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes
Probab=66.15 E-value=8.2 Score=22.39 Aligned_cols=32 Identities=9% Similarity=0.149 Sum_probs=26.9
Q ss_pred hhhhCCCCccCeeecCCcccccHHHHHHHHHH
Q 030554 7 FLKINPIGYVPALVDGDFVVSDSFAILMYLEE 38 (175)
Q Consensus 7 ~~~~nP~~~vP~L~~~g~~l~es~~I~~yL~~ 38 (175)
+.+++....+|++..+|..+.++..|..+..+
T Consensus 45 ~~~~~g~~~~P~v~~~g~~igg~~~~~~~~~~ 76 (82)
T cd03419 45 LQELTGQRTVPNVFIGGKFIGGCDDLMALHKS 76 (82)
T ss_pred HHHHhCCCCCCeEEECCEEEcCHHHHHHHHHc
Confidence 45677778999999999999999999888764
No 129
>TIGR02180 GRX_euk Glutaredoxin. This model represents eukaryotic glutaredoxins and includes sequences from fungi, plants and metazoans as well as viruses.
Probab=64.75 E-value=9 Score=22.27 Aligned_cols=32 Identities=13% Similarity=0.145 Sum_probs=25.0
Q ss_pred hhhhCCCCccCeeecCCcccccHHHHHHHHHH
Q 030554 7 FLKINPIGYVPALVDGDFVVSDSFAILMYLEE 38 (175)
Q Consensus 7 ~~~~nP~~~vP~L~~~g~~l~es~~I~~yL~~ 38 (175)
+.+......+|++..+|..+..+..+.++..+
T Consensus 46 l~~~~g~~~vP~v~i~g~~igg~~~~~~~~~~ 77 (84)
T TIGR02180 46 LEEITGQRTVPNIFINGKFIGGCSDLLALYKS 77 (84)
T ss_pred HHHHhCCCCCCeEEECCEEEcCHHHHHHHHHc
Confidence 44556677899999889999988888877654
No 130
>cd03028 GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins. The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein
Probab=51.74 E-value=20 Score=21.60 Aligned_cols=31 Identities=10% Similarity=-0.033 Sum_probs=23.4
Q ss_pred hhhhhCCCCccCeeecCCcccccHHHHHHHH
Q 030554 6 DFLKINPIGYVPALVDGDFVVSDSFAILMYL 36 (175)
Q Consensus 6 ~~~~~nP~~~vP~L~~~g~~l~es~~I~~yL 36 (175)
++.+.+...++|.+..||..|.....+....
T Consensus 54 ~l~~~~g~~tvP~vfi~g~~iGG~~~l~~l~ 84 (90)
T cd03028 54 GLKEYSNWPTFPQLYVNGELVGGCDIVKEMH 84 (90)
T ss_pred HHHHHhCCCCCCEEEECCEEEeCHHHHHHHH
Confidence 3456677778999988888888887777654
No 131
>COG0695 GrxC Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=46.28 E-value=19 Score=21.25 Aligned_cols=28 Identities=14% Similarity=-0.008 Sum_probs=19.6
Q ss_pred hhhCCCCccCeeecCCcccccHHHHHHH
Q 030554 8 LKINPIGYVPALVDGDFVVSDSFAILMY 35 (175)
Q Consensus 8 ~~~nP~~~vP~L~~~g~~l~es~~I~~y 35 (175)
.+.++..+||++..||..+.....+..+
T Consensus 46 ~~~~g~~tvP~I~i~~~~igg~~d~~~~ 73 (80)
T COG0695 46 KRGKGQRTVPQIFIGGKHVGGCDDLDAL 73 (80)
T ss_pred HHhCCCCCcCEEEECCEEEeCcccHHHH
Confidence 3445899999999888777654444443
No 132
>TIGR02189 GlrX-like_plant Glutaredoxin-like family. This family of glutaredoxin-like proteins is aparrently limited to plants. Multiple isoforms are found in A. thaliana and O.sativa.
Probab=45.18 E-value=30 Score=21.35 Aligned_cols=30 Identities=17% Similarity=0.175 Sum_probs=23.7
Q ss_pred hhhhCCCCccCeeecCCcccccHHHHHHHH
Q 030554 7 FLKINPIGYVPALVDGDFVVSDSFAILMYL 36 (175)
Q Consensus 7 ~~~~nP~~~vP~L~~~g~~l~es~~I~~yL 36 (175)
+.+.+...+||.+..+|..|.....+....
T Consensus 53 l~~~tg~~tvP~Vfi~g~~iGG~ddl~~l~ 82 (99)
T TIGR02189 53 LSRLGCSPAVPAVFVGGKLVGGLENVMALH 82 (99)
T ss_pred HHHhcCCCCcCeEEECCEEEcCHHHHHHHH
Confidence 556677889999999999998877776643
No 133
>PHA03050 glutaredoxin; Provisional
Probab=45.16 E-value=25 Score=22.16 Aligned_cols=29 Identities=21% Similarity=0.169 Sum_probs=23.3
Q ss_pred hhhhhCCCCccCeeecCCcccccHHHHHH
Q 030554 6 DFLKINPIGYVPALVDGDFVVSDSFAILM 34 (175)
Q Consensus 6 ~~~~~nP~~~vP~L~~~g~~l~es~~I~~ 34 (175)
++.+++...+||.+..||..|.....+..
T Consensus 60 ~l~~~tG~~tVP~IfI~g~~iGG~ddl~~ 88 (108)
T PHA03050 60 YFEQITGGRTVPRIFFGKTSIGGYSDLLE 88 (108)
T ss_pred HHHHHcCCCCcCEEEECCEEEeChHHHHH
Confidence 46677778899999999999887776665
No 134
>PRK10329 glutaredoxin-like protein; Provisional
Probab=43.56 E-value=19 Score=21.35 Aligned_cols=19 Identities=21% Similarity=0.476 Sum_probs=14.4
Q ss_pred hhhCCCCccCeeecCCccc
Q 030554 8 LKINPIGYVPALVDGDFVV 26 (175)
Q Consensus 8 ~~~nP~~~vP~L~~~g~~l 26 (175)
.+.++..+||+++.++..+
T Consensus 43 ~~~~g~~~vPvv~i~~~~~ 61 (81)
T PRK10329 43 LRAQGFRQLPVVIAGDLSW 61 (81)
T ss_pred HHHcCCCCcCEEEECCEEE
Confidence 4457889999999777544
No 135
>PF00462 Glutaredoxin: Glutaredoxin; InterPro: IPR002109 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This entry represents Glutaredoxin.; GO: 0009055 electron carrier activity, 0015035 protein disulfide oxidoreductase activity, 0045454 cell redox homeostasis; PDB: 1QFN_A 1GRX_A 1EGO_A 1EGR_A 3RHC_A 3RHB_A 3IPZ_A 1NHO_A 3GX8_A 3D5J_A ....
Probab=42.76 E-value=15 Score=19.92 Aligned_cols=21 Identities=10% Similarity=0.241 Sum_probs=16.0
Q ss_pred hhhhhCCCCccCeeecCCccc
Q 030554 6 DFLKINPIGYVPALVDGDFVV 26 (175)
Q Consensus 6 ~~~~~nP~~~vP~L~~~g~~l 26 (175)
++.+.+...++|++..||..|
T Consensus 40 ~l~~~~g~~~~P~v~i~g~~I 60 (60)
T PF00462_consen 40 ELKELSGVRTVPQVFIDGKFI 60 (60)
T ss_dssp HHHHHHSSSSSSEEEETTEEE
T ss_pred HHHHHcCCCccCEEEECCEEC
Confidence 455666889999999888654
No 136
>PF10022 DUF2264: Uncharacterized protein conserved in bacteria (DUF2264); InterPro: IPR016624 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=39.02 E-value=1.3e+02 Score=23.61 Aligned_cols=135 Identities=13% Similarity=0.107 Sum_probs=72.0
Q ss_pred cCeeecCCcccccHHHHHHHHHHhCCCCCCC-CccHHHHHHHHHHHHHHhccccchhH-----HHHHHHhhhccCchHHH
Q 030554 16 VPALVDGDFVVSDSFAILMYLEEKYPQPPLL-PSDLKRKAINYQAANIVSSSIQPLQN-----LAVVKYIEEKAGADERD 89 (175)
Q Consensus 16 vP~L~~~g~~l~es~~I~~yL~~~~~~~~l~-p~~~~~~a~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 89 (175)
.+.+.+.+..+.|+.+|+..|...-. .+. +-+..++.++..|+.-++..-.+.-+ .++...+......
T Consensus 98 w~~~~~~dQ~~VEaa~la~aL~~a~~--~lW~~L~~~~k~~l~~wL~~~~~~~~~~nNW~lF~v~v~~~L~~~G~~---- 171 (361)
T PF10022_consen 98 WGFIGDYDQRLVEAASLALALLRAPE--WLWDPLDEEEKENLVDWLKQIRGIKPPDNNWLLFRVMVEAFLKKVGEE---- 171 (361)
T ss_pred cCCcccchhhHhHHHHHHHHHHHCHH--HHHhhCCHHHHHHHHHHHHhcCcCCCccchhHHHHHHHHHHHHHcCCC----
Confidence 34555667999999999999987532 122 33678888888888877665433222 1222222222111
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHHHHHH---hhcCCCCccchHHHHHHHHHhcChh
Q 030554 90 IWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQLYAAV---NRFNLDMTQFPLLLRLHEAYSKLPA 160 (175)
Q Consensus 90 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l~~~~---~~~~~~~~~~p~l~~~~~~~~~~~~ 160 (175)
.-...+...++.+|+.=.+ .+|.....-.-.|-+..-.++... ...-.. ..-+...++.+|......
T Consensus 172 -~d~~~i~~~l~~~e~~Y~G--dGWY~DG~~~~~DYYns~aih~y~l~~~~~~~~-~~~~~~~~~~~Ra~~fa~ 241 (361)
T PF10022_consen 172 -YDEERIDYDLERIEEWYLG--DGWYSDGPEFQFDYYNSWAIHPYLLLYARLMGD-EDPERAARYRQRAQRFAE 241 (361)
T ss_pred -CcHHHHHHHHHHHHHHhcc--CCccccCCccCCcchHHHHHHHHHHHHHHHhcc-cCHHHHHHHHHHHHHHHH
Confidence 1126677777777774443 366653333455666533333221 111111 112356677777666433
No 137
>TIGR00365 monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.
Probab=38.39 E-value=41 Score=20.64 Aligned_cols=32 Identities=13% Similarity=0.053 Sum_probs=23.5
Q ss_pred hhhhhCCCCccCeeecCCcccccHHHHHHHHH
Q 030554 6 DFLKINPIGYVPALVDGDFVVSDSFAILMYLE 37 (175)
Q Consensus 6 ~~~~~nP~~~vP~L~~~g~~l~es~~I~~yL~ 37 (175)
++.+++...+||.+..||..|.....+.....
T Consensus 58 ~l~~~tg~~tvP~vfi~g~~iGG~ddl~~l~~ 89 (97)
T TIGR00365 58 GIKEYSNWPTIPQLYVKGEFVGGCDIIMEMYQ 89 (97)
T ss_pred HHHHHhCCCCCCEEEECCEEEeChHHHHHHHH
Confidence 34566777799999988888887777666443
No 138
>PF09098 Dehyd-heme_bind: Quinohemoprotein amine dehydrogenase A, alpha subunit, haem binding; InterPro: IPR015182 Quinohemoprotein amine dehydrogenases (QHNDH) 1.4.99 from EC) are enzymes produced in the periplasmic space of certain Gram-negative bacteria, such as Paracoccus denitrificans and Pseudomonas putida, in response to primary amines, including n-butylamine and benzylamine. QHNDH catalyses the oxidative deamination of a wide range of aliphatic and aromatic amines through formation of a Schiff-base intermediate involving one of the quinone O atoms []. Catalysis requires the presence of a novel redox cofactor, cysteine tryptophylquinone (CTQ). CTQ is derived from the post-translational modification of specific residues, which involves the oxidation of the indole ring of a tryptophan residue to form tryptophylquinone, followed by covalent cross-linking with a cysteine residue []. There is one CTQ per subunit in QHNDH. In addition to CTQ, two haem c cofactors are present in QHNDH that mediate the transfer of the substrate-derived electrons from CTQ to an external electron acceptor, cytochrome c-550 [, ]. QHNDH is a heterotrimer of alpha, beta and gamma subunits. The alpha and beta subunits contain signal peptides necessary for the translocation of QHNDH to the periplasm. The alpha subunit is composed of four domains - domain 1 forming a dihaem cytochrome, and domains 2-4 forming antiparallel beta-barrel structures; the beta subunit is a 7-bladed beta-propeller that provides part of the active site; and the small, catalytic gamma subunit contains the novel cross-linked CTQ cofactor, in addition to additional thioester cross-links between Cys and Asp/Glu residues that encage CTQ. The gamma subunit assumes a globular secondary structure with two short alpha-helices having many turns and bends []. This entry represents the dihaem cytochrome c domain of the QHNDH alpha subunit. The domain contain two cysteine residues that are involved in thioether linkages to haem []. ; PDB: 1PBY_A 1JJU_A 1JMZ_A 1JMX_A.
Probab=33.83 E-value=38 Score=23.26 Aligned_cols=19 Identities=32% Similarity=0.515 Sum_probs=13.3
Q ss_pred ccHHHHHHHHHHhCCCCCCCCc
Q 030554 27 SDSFAILMYLEEKYPQPPLLPS 48 (175)
Q Consensus 27 ~es~~I~~yL~~~~~~~~l~p~ 48 (175)
.|-.+|++||++.+| |.|.
T Consensus 54 eer~avVkYLAd~~G---Lap~ 72 (167)
T PF09098_consen 54 EERRAVVKYLADTQG---LAPS 72 (167)
T ss_dssp HHHHHHHHHHHHHT------CG
T ss_pred HHHHHHHHHHHHccC---CCch
Confidence 467899999999997 5553
No 139
>PF12290 DUF3802: Protein of unknown function (DUF3802); InterPro: IPR020979 This family of proteins is found in bacteria and are typically between 114 and 143 amino acids in length. There is a conserved KNLFD sequence motif. The annotation with this family suggests that it may be the B subunit of bacterial type IIA DNA topoisomerase but there is no evidence to support this annotation.
Probab=32.56 E-value=82 Score=20.15 Aligned_cols=37 Identities=8% Similarity=-0.005 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhH
Q 030554 87 ERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLA 128 (175)
Q Consensus 87 ~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~ 128 (175)
..+-...+........|+..|++- .+..+|..-+.+.
T Consensus 60 ~~R~~iirE~Daiv~DLeEVLa~V-----~~~~aT~eQ~~Fi 96 (113)
T PF12290_consen 60 SQRFQIIREADAIVYDLEEVLASV-----WNQKATNEQIAFI 96 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-----HcCCCCHHHHHHH
Confidence 345556677788888899998862 2345666555544
No 140
>PF04564 U-box: U-box domain; InterPro: IPR003613 Quality control of intracellular proteins is essential for cellular homeostasis. Molecular chaperones recognise and contribute to the refolding of misfolded or unfolded proteins, whereas the ubiquitin-proteasome system mediates the degradation of such abnormal proteins. Ubiquitin-protein ligases (E3s) determine the substrate specificity for ubiquitylation and have been classified into HECT and RING-finger families. More recently, however, U-box proteins, which contain a domain (the U box) of about 70 amino acids that is conserved from yeast to humans, have been identified as a new type of E3 []. Members of the U-box family of proteins constitute a class of ubiquitin-protein ligases (E3s) distinct from the HECT-type and RING finger-containing E3 families []. Using yeast two-hybrid technology, all mammalian U-box proteins have been reported to interact with molecular chaperones or co-chaperones, including Hsp90, Hsp70, DnaJc7, EKN1, CRN, and VCP. This suggests that the function of U box-type E3s is to mediate the degradation of unfolded or misfolded proteins in conjunction with molecular chaperones as receptors that recognise such abnormal proteins [, ]. Unlike the RING finger domain, IPR001841 from INTERPRO, that is stabilised by Zn2+ ions coordinated by the cysteines and a histidine, the U-box scaffold is probably stabilised by a system of salt-bridges and hydrogen bonds. The charged and polar residues that participate in this network of bonds are more strongly conserved in the U-box proteins than in classic RING fingers, which supports their role in maintaining the stability of the U box. Thus, the U box appears to have evolved from a RING finger domain by appropriation of a new set of residues required to stabilise its structure, concomitant with the loss of the original, metal-chelating residues [].; GO: 0004842 ubiquitin-protein ligase activity, 0016567 protein ubiquitination, 0000151 ubiquitin ligase complex; PDB: 1T1H_A 2C2L_D 2C2V_V 1WGM_A 2KR4_A 3L1Z_B 3L1X_A 2KRE_A 3M63_A 2QIZ_A ....
Probab=30.62 E-value=1.1e+02 Score=17.53 Aligned_cols=25 Identities=20% Similarity=0.206 Sum_probs=20.5
Q ss_pred ccCeeecCCcccccHHHHHHHHHHhC
Q 030554 15 YVPALVDGDFVVSDSFAILMYLEEKY 40 (175)
Q Consensus 15 ~vP~L~~~g~~l~es~~I~~yL~~~~ 40 (175)
+=|++...| ...|-.+|.+||....
T Consensus 15 ~dPVi~~~G-~tyer~~I~~~l~~~~ 39 (73)
T PF04564_consen 15 RDPVILPSG-HTYERSAIERWLEQNG 39 (73)
T ss_dssp SSEEEETTS-EEEEHHHHHHHHCTTS
T ss_pred hCceeCCcC-CEEcHHHHHHHHHcCC
Confidence 448999777 7789999999999843
No 141
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=30.35 E-value=65 Score=20.30 Aligned_cols=31 Identities=13% Similarity=0.197 Sum_probs=22.7
Q ss_pred hhhhCCCCccCeeecCCcccccHHHHHHHHH
Q 030554 7 FLKINPIGYVPALVDGDFVVSDSFAILMYLE 37 (175)
Q Consensus 7 ~~~~nP~~~vP~L~~~g~~l~es~~I~~yL~ 37 (175)
+.++.-..+||.+-.+|+.+.....++.+-.
T Consensus 59 l~~~tg~~tvP~vFI~Gk~iGG~~dl~~lh~ 89 (104)
T KOG1752|consen 59 LKKLTGQRTVPNVFIGGKFIGGASDLMALHK 89 (104)
T ss_pred HHHhcCCCCCCEEEECCEEEcCHHHHHHHHH
Confidence 3455566688888888888888777776644
No 142
>PF04659 Arch_fla_DE: Archaeal flagella protein ; InterPro: IPR006752 Archaeal flagella are unique motility structures, and the absence of bacterial structural motility genes in the complete genome sequences of flagellated archaeal species has always suggested that archaeal flagellar biogenesis is likely mediated by novel components. FlaD and FlaE, are present in the cell as membrane-associated proteins but are not major components of isolated flagellar filaments. Interestingly, flaD was found to encode two proteins, each translated from a separate ribosome binding site. This group of sequences contain the archaeal flaD and flaE proteins. The conserved region that defines these sequences is found in the N-teminal region of flaE but towards the C-terminal region of flaD [].; GO: 0001539 ciliary or flagellar motility
Probab=30.29 E-value=1.4e+02 Score=18.62 Aligned_cols=29 Identities=17% Similarity=0.206 Sum_probs=18.3
Q ss_pred CCcccC-CCccHHHHHhHHHHHHHHhhcCC
Q 030554 112 GKYATG-DEVFLADLYLAPQLYAAVNRFNL 140 (175)
Q Consensus 112 ~~~l~G-~~~t~aD~~~~~~l~~~~~~~~~ 140 (175)
++||.. ..=..+++.++-+|..+..++|.
T Consensus 5 ~~~L~~iP~~~~s~~~~~eWLefLve~~G~ 34 (99)
T PF04659_consen 5 KPYLETIPEDYVSEIVVFEWLEFLVERVGH 34 (99)
T ss_pred CchhhcCCcchHHHHHHHHHHHHHHHHccc
Confidence 355554 34466788887777777555554
No 143
>PF10990 DUF2809: Protein of unknown function (DUF2809); InterPro: IPR021257 Some members in this family of proteins are annotated as yjgA however currently no function for the protein is known.
Probab=28.99 E-value=40 Score=20.62 Aligned_cols=18 Identities=17% Similarity=0.067 Sum_probs=15.1
Q ss_pred CcccCCCccHHHHHhHHH
Q 030554 113 KYATGDEVFLADLYLAPQ 130 (175)
Q Consensus 113 ~~l~G~~~t~aD~~~~~~ 130 (175)
..+.|..+++.|+..+..
T Consensus 71 ~lvLG~~F~w~Dll~Y~i 88 (91)
T PF10990_consen 71 RLVLGSTFDWWDLLAYAI 88 (91)
T ss_pred HhhcCCCCCHHHHHHHHH
Confidence 458899999999988754
No 144
>PRK15371 effector protein YopJ; Provisional
Probab=27.88 E-value=2.7e+02 Score=21.16 Aligned_cols=63 Identities=17% Similarity=0.203 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHHHHHH--hhcCCCCccchHHHHHHHHHh
Q 030554 91 WAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQLYAAV--NRFNLDMTQFPLLLRLHEAYS 156 (175)
Q Consensus 91 ~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l~~~~--~~~~~~~~~~p~l~~~~~~~~ 156 (175)
...+++...++.||..+++ |.|+ .+..+..|+-..+.|.... ...++++.-+-.-.++++.++
T Consensus 23 ~~~~~L~~~i~~le~~~~~--G~~~-~~~~~~~Di~~lp~lv~~~N~r~P~LNL~~f~s~~~f~~aik 87 (287)
T PRK15371 23 ISNEELKNIITQLEDDIAD--GSWI-HKNYARTDLEVMPALVAQANNKYPEMNLKLVTSPLDLSIEIK 87 (287)
T ss_pred hhHHHHHHHHHHHHHHHHc--CCCC-CchhHHhhHHhhHHHHHHHhccCCCCCeeecCCHHHHHHHHH
Confidence 4567799999999999987 4666 4568899999999887662 223444444444445555554
No 145
>PF11553 DUF3231: Protein of unknown function (DUF3231); InterPro: IPR021617 This bacterial family of proteins has no known function. ; PDB: 2RBD_B.
Probab=27.43 E-value=2e+02 Score=19.45 Aligned_cols=54 Identities=19% Similarity=0.046 Sum_probs=30.2
Q ss_pred HHHHHHHHhccccchhHHHHHHHhhhccCchHHHHHHHHHHHHHHHHHHHHHhhc
Q 030554 56 NYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDY 110 (175)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~ 110 (175)
..-|..+....+...+...+.+..+... -........+...+.++.+++.|.+.
T Consensus 20 ~~Lw~~~~~~~~~~~~~~~f~~~~~D~d-ik~~l~~~~~~~~~~i~~l~~ll~~e 73 (166)
T PF11553_consen 20 GNLWNNYMANYMSICLLQYFLQVAEDKD-IKKLLKKGLDLSQKQIEQLEKLLKEE 73 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH---HH-HHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3344444444443333333333333322 23466677788899999999999874
No 146
>PF03711 OKR_DC_1_C: Orn/Lys/Arg decarboxylase, C-terminal domain; InterPro: IPR008286 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 3Q16_C 3N75_A 2X3L_A 2VYC_D.
Probab=27.16 E-value=39 Score=22.41 Aligned_cols=24 Identities=29% Similarity=0.509 Sum_probs=16.8
Q ss_pred cCeeecCCcccccHHHHHHHHHHh
Q 030554 16 VPALVDGDFVVSDSFAILMYLEEK 39 (175)
Q Consensus 16 vP~L~~~g~~l~es~~I~~yL~~~ 39 (175)
+|+|..|...-.++..|++||...
T Consensus 89 IPll~pGE~it~~~~~~i~yl~~l 112 (136)
T PF03711_consen 89 IPLLVPGERITEETEEIIDYLLAL 112 (136)
T ss_dssp S-SB-TTEEB-STTHHHHHHHHHH
T ss_pred CcEECCccccccchHHHHHHHHHH
Confidence 588887777767789999999774
No 147
>TIGR01764 excise DNA binding domain, excisionase family. An excisionase, or Xis protein, is a small protein that binds and promotes excisive recombination; it is not enzymatically active. This model represents a number of putative excisionases and related proteins from temperate phage, plasmids, and transposons, as well as DNA binding domains of other proteins, such as a DNA modification methylase. This model identifies mostly small proteins and N-terminal regions of large proteins, but some proteins appear to have two copies. This domain appears similar, in both sequence and predicted secondary structure (PSIPRED) to the MerR family of transcriptional regulators (pfam00376).
Probab=25.24 E-value=1e+02 Score=15.32 Aligned_cols=25 Identities=28% Similarity=0.226 Sum_probs=19.5
Q ss_pred CCccCeeecCCcccccHHHHHHHHH
Q 030554 13 IGYVPALVDGDFVVSDSFAILMYLE 37 (175)
Q Consensus 13 ~~~vP~L~~~g~~l~es~~I~~yL~ 37 (175)
.|.+|....++..+.....|.+|+.
T Consensus 24 ~g~i~~~~~g~~~~~~~~~l~~~~~ 48 (49)
T TIGR01764 24 EGELPAYRVGRHYRIPREDVDEYLE 48 (49)
T ss_pred cCCCCeEEeCCeEEEeHHHHHHHHh
Confidence 4788887777777888888888875
No 148
>TIGR03412 iscX_yfhJ FeS assembly protein IscX. Members of this protein family are YfhJ, a protein of the ISC system for iron-sulfur cluster assembly. Other genes in the system include iscSUA, hscBA, and fdx.
Probab=24.56 E-value=87 Score=17.78 Aligned_cols=17 Identities=35% Similarity=0.389 Sum_probs=15.0
Q ss_pred cccHHHHHHHHHHhCCC
Q 030554 26 VSDSFAILMYLEEKYPQ 42 (175)
Q Consensus 26 l~es~~I~~yL~~~~~~ 42 (175)
.+||..|+.-|.++||+
T Consensus 2 W~D~~eIA~~L~e~~pd 18 (63)
T TIGR03412 2 WTDSQEIAIALAEAHPD 18 (63)
T ss_pred ccCHHHHHHHHHHHCCC
Confidence 46899999999999985
No 149
>PF12972 NAGLU_C: Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain; InterPro: IPR024732 Alpha-N-acetylglucosaminidase is a lysosomal enzyme required for the stepwise degradation of heparan sulphate []. Mutations on the alpha-N-acetylglucosaminidase (NAGLU) gene can lead to Mucopolysaccharidosis type IIIB (MPS IIIB, or Sanfilippo syndrome type B) characterised by neurological dysfunction but relatively mild somatic manifestations []. The structure shows that the enzyme is composed of three domains. This C-terminal domain has an all alpha helical fold [].; PDB: 2VC9_A 2VCC_A 2VCB_A 2VCA_A 4A4A_A.
Probab=22.14 E-value=3.4e+02 Score=20.26 Aligned_cols=49 Identities=16% Similarity=0.035 Sum_probs=32.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhcCCCccc----------CCCccHHHHHhHHHHHHH
Q 030554 85 ADERDIWAKTHIGKGFAALEKLLKDYAGKYAT----------GDEVFLADLYLAPQLYAA 134 (175)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~----------G~~~t~aD~~~~~~l~~~ 134 (175)
+....+....++...+..++.+|+.+ ..|++ |....-.|.+-+..-..+
T Consensus 121 d~~~~~~~~~~~l~ll~dlD~lL~t~-~~f~Lg~Wi~~Ar~~g~~~~e~~~yE~NAR~qI 179 (267)
T PF12972_consen 121 DIEAFKALSARFLELLDDLDRLLATN-PEFLLGKWIEDARAWGTTPEEKDLYEYNARNQI 179 (267)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHTT--GGGBHHHHHHHHHHSSTT--HHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHCcC-CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHh
Confidence 34567788888999999999999875 35554 445566677666665555
No 150
>cd06891 PX_Vps17p The phosphoinositide binding Phox Homology domain of yeast sorting nexin Vps17p. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. Vsp17p forms a dimer with Vps5p, the yeast counterpart of human SNX1, and is part of the retromer complex that mediates the transport of the carboxypeptidase Y receptor Vps10p from endosomes to Golgi. Similar to Vps5p and SNX1, Vps17p harbors a Bin/Amphiphysin/Rvs (BAR) domain, which detects membrane curvatur
Probab=22.08 E-value=70 Score=21.41 Aligned_cols=18 Identities=17% Similarity=0.050 Sum_probs=15.2
Q ss_pred chHHHHHHHHHhcChhhh
Q 030554 145 FPLLLRLHEAYSKLPAFQ 162 (175)
Q Consensus 145 ~p~l~~~~~~~~~~~~~~ 162 (175)
.-.|++|++|+.++|...
T Consensus 111 r~~LqrfL~RV~~hP~L~ 128 (140)
T cd06891 111 KANLQRWFNRVCSDPILI 128 (140)
T ss_pred HHHHHHHHHHHhCChhhc
Confidence 467999999999999654
No 151
>PF07862 Nif11: Nitrogen fixation protein of unknown function; InterPro: IPR012903 This domain is found in the cyanobacteria, and the nitrogen-fixing proteobacterium Azotobacter vinelandii and may be involved in nitrogen fixation, but no role has been assigned [].
Probab=21.73 E-value=1e+02 Score=16.01 Aligned_cols=21 Identities=14% Similarity=0.115 Sum_probs=16.3
Q ss_pred hHHHHHHHHHhcChhhhhhCC
Q 030554 146 PLLLRLHEAYSKLPAFQNAAP 166 (175)
Q Consensus 146 p~l~~~~~~~~~~~~~~~~~~ 166 (175)
..+.++++++.+.|.++.-+.
T Consensus 4 ~~l~~Fl~~~~~d~~l~~~l~ 24 (49)
T PF07862_consen 4 ESLKAFLEKVKSDPELREQLK 24 (49)
T ss_pred HHHHHHHHHHhcCHHHHHHHH
Confidence 467888888888888876554
No 152
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C-terminal do
Probab=21.69 E-value=2e+02 Score=21.99 Aligned_cols=39 Identities=31% Similarity=0.376 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHhhcCCCcccCCCccHHHHHhHHHHHHH
Q 030554 96 IGKGFAALEKLLKDYAGKYATGDEVFLADLYLAPQLYAA 134 (175)
Q Consensus 96 ~~~~l~~le~~L~~~~~~~l~G~~~t~aD~~~~~~l~~~ 134 (175)
+.+.+..||.+-......---|.++|+||+...+=...+
T Consensus 74 L~~~~~~Le~ik~~~~~~~~~~~~vS~ADLivLaG~vAi 112 (297)
T cd08200 74 LAKVLAVLEGIQKEFNESQSGGKKVSLADLIVLGGCAAV 112 (297)
T ss_pred HHHHHHHHHHHHHHhcccccCCccccHHHHHHHHhHHHH
Confidence 666666776665442111122457999999776665555
No 153
>PRK10721 hypothetical protein; Provisional
Probab=21.34 E-value=1.1e+02 Score=17.54 Aligned_cols=18 Identities=33% Similarity=0.302 Sum_probs=15.8
Q ss_pred ccccHHHHHHHHHHhCCC
Q 030554 25 VVSDSFAILMYLEEKYPQ 42 (175)
Q Consensus 25 ~l~es~~I~~yL~~~~~~ 42 (175)
.-+||..|+.-|.++||+
T Consensus 4 kW~D~~dIA~~L~e~~Pd 21 (66)
T PRK10721 4 KWTDSREIGEALYDAYPD 21 (66)
T ss_pred cccCHHHHHHHHHHHCCC
Confidence 457999999999999985
No 154
>PF12728 HTH_17: Helix-turn-helix domain
Probab=21.23 E-value=1.4e+02 Score=15.40 Aligned_cols=26 Identities=19% Similarity=0.158 Sum_probs=19.6
Q ss_pred CCccCeeecCCcccccHHHHHHHHHH
Q 030554 13 IGYVPALVDGDFVVSDSFAILMYLEE 38 (175)
Q Consensus 13 ~~~vP~L~~~g~~l~es~~I~~yL~~ 38 (175)
.|.+|....++.....-..|.+|+.+
T Consensus 24 ~g~i~~~~~g~~~~~~~~~l~~~~~~ 49 (51)
T PF12728_consen 24 QGKIPPFKIGRKWRIPKSDLDRWLER 49 (51)
T ss_pred cCCCCeEEeCCEEEEeHHHHHHHHHh
Confidence 46777777777777778888888765
No 155
>PF12622 NpwBP: mRNA biogenesis factor
Probab=20.98 E-value=49 Score=17.61 Aligned_cols=11 Identities=36% Similarity=0.739 Sum_probs=8.1
Q ss_pred hhCCCCccCee
Q 030554 9 KINPIGYVPAL 19 (175)
Q Consensus 9 ~~nP~~~vP~L 19 (175)
..||+|++|--
T Consensus 10 ~~NP~G~~P~g 20 (48)
T PF12622_consen 10 ELNPLGKPPPG 20 (48)
T ss_pred ccCCCCCCCCC
Confidence 46888888754
Done!