Query 030558
Match_columns 175
No_of_seqs 113 out of 1606
Neff 10.2
Searched_HMMs 29240
Date Tue Mar 26 01:26:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030558.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030558hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gek_A TRNA (CMO5U34)-methyltr 99.8 7.5E-21 2.6E-25 139.3 11.6 108 6-118 68-178 (261)
2 1nkv_A Hypothetical protein YJ 99.8 2.4E-21 8.3E-26 141.1 8.8 149 6-165 34-184 (256)
3 3bus_A REBM, methyltransferase 99.8 3.9E-21 1.3E-25 141.4 9.1 155 6-166 59-214 (273)
4 3vc1_A Geranyl diphosphate 2-C 99.8 6.9E-21 2.4E-25 142.8 10.2 154 6-167 115-268 (312)
5 3dlc_A Putative S-adenosyl-L-m 99.8 1.5E-21 5.2E-26 138.7 5.9 161 10-175 45-213 (219)
6 3hem_A Cyclopropane-fatty-acyl 99.8 7.5E-21 2.6E-25 142.0 9.0 156 6-166 70-241 (302)
7 2o57_A Putative sarcosine dime 99.8 8.5E-21 2.9E-25 141.2 9.2 155 5-167 79-233 (297)
8 3f4k_A Putative methyltransfer 99.8 9.8E-21 3.3E-25 138.0 9.3 149 6-165 44-193 (257)
9 3kkz_A Uncharacterized protein 99.8 2.8E-20 9.6E-25 136.5 10.8 150 6-166 44-194 (267)
10 4htf_A S-adenosylmethionine-de 99.8 1.1E-20 3.8E-25 139.9 8.5 151 8-167 68-231 (285)
11 2p7i_A Hypothetical protein; p 99.8 3.1E-20 1.1E-24 134.4 10.3 149 7-170 41-201 (250)
12 3sm3_A SAM-dependent methyltra 99.8 1.2E-19 4.1E-24 130.3 13.2 161 7-172 29-211 (235)
13 1vl5_A Unknown conserved prote 99.8 1.8E-20 6.1E-25 137.0 8.8 157 7-172 36-194 (260)
14 3e23_A Uncharacterized protein 99.8 1.3E-19 4.4E-24 128.5 12.3 138 7-166 42-180 (211)
15 1xxl_A YCGJ protein; structura 99.8 2.1E-20 7.2E-25 135.2 8.3 159 5-172 18-178 (239)
16 3ujc_A Phosphoethanolamine N-m 99.8 2.1E-20 7.2E-25 136.7 8.2 151 5-166 52-204 (266)
17 3l8d_A Methyltransferase; stru 99.8 5.1E-20 1.7E-24 133.0 9.9 147 7-166 52-198 (242)
18 3h2b_A SAM-dependent methyltra 99.8 1.2E-19 4.2E-24 127.9 11.4 139 9-166 42-180 (203)
19 3dh0_A SAM dependent methyltra 99.8 1.9E-19 6.5E-24 128.2 12.4 142 6-165 35-178 (219)
20 3g5l_A Putative S-adenosylmeth 99.8 1.4E-19 4.7E-24 131.7 11.9 152 6-168 42-216 (253)
21 2a14_A Indolethylamine N-methy 99.8 2.6E-20 8.7E-25 136.6 7.9 152 6-167 53-237 (263)
22 3jwg_A HEN1, methyltransferase 99.8 1.5E-19 5.1E-24 128.9 11.7 108 7-117 28-140 (219)
23 3dli_A Methyltransferase; PSI- 99.8 1.2E-19 4.1E-24 131.2 11.2 142 7-166 40-182 (240)
24 3e8s_A Putative SAM dependent 99.8 2E-19 6.8E-24 128.4 12.1 144 7-167 51-208 (227)
25 3jwh_A HEN1; methyltransferase 99.8 1.2E-19 3.9E-24 129.4 10.7 152 7-165 28-189 (217)
26 3pfg_A N-methyltransferase; N, 99.8 1.7E-19 5.9E-24 132.0 11.9 102 8-119 50-152 (263)
27 1xtp_A LMAJ004091AAA; SGPP, st 99.8 8.4E-20 2.9E-24 132.8 10.0 145 7-166 92-236 (254)
28 3ou2_A SAM-dependent methyltra 99.8 3.8E-19 1.3E-23 126.4 13.1 151 6-166 44-203 (218)
29 3hnr_A Probable methyltransfer 99.8 1.3E-19 4.3E-24 129.2 10.4 156 8-174 45-209 (220)
30 3lcc_A Putative methyl chlorid 99.8 1.6E-19 5.5E-24 130.1 10.8 140 8-167 66-206 (235)
31 3bzb_A Uncharacterized protein 99.8 4.4E-19 1.5E-23 131.3 13.1 137 6-165 77-234 (281)
32 1pjz_A Thiopurine S-methyltran 99.8 7.5E-20 2.6E-24 129.3 8.4 142 7-166 21-174 (203)
33 3ocj_A Putative exported prote 99.8 2.7E-19 9.2E-24 133.8 11.5 157 6-166 116-289 (305)
34 3g07_A 7SK snRNA methylphospha 99.8 4.9E-20 1.7E-24 137.1 7.4 158 4-165 42-266 (292)
35 4fsd_A Arsenic methyltransfera 99.8 1.3E-19 4.5E-24 139.5 9.8 154 6-166 81-249 (383)
36 1kpg_A CFA synthase;, cyclopro 99.8 4.6E-19 1.6E-23 131.2 12.0 155 6-166 62-226 (287)
37 3dtn_A Putative methyltransfer 99.8 2.9E-19 9.8E-24 128.6 10.2 154 6-167 42-213 (234)
38 2ex4_A Adrenal gland protein A 99.8 2.5E-19 8.5E-24 129.6 9.8 145 8-166 79-223 (241)
39 3g2m_A PCZA361.24; SAM-depende 99.8 2.1E-19 7.1E-24 134.0 9.5 110 8-121 82-193 (299)
40 1y8c_A S-adenosylmethionine-de 99.8 7E-19 2.4E-23 127.1 11.6 106 8-119 37-143 (246)
41 3mgg_A Methyltransferase; NYSG 99.8 3.2E-19 1.1E-23 131.3 9.9 159 6-172 35-202 (276)
42 3thr_A Glycine N-methyltransfe 99.8 4.6E-19 1.6E-23 131.5 9.5 110 7-118 56-175 (293)
43 1ri5_A MRNA capping enzyme; me 99.8 1.5E-18 5.3E-23 128.8 12.3 112 7-120 63-176 (298)
44 2i62_A Nicotinamide N-methyltr 99.8 7E-19 2.4E-23 128.5 10.3 149 7-166 55-237 (265)
45 3ege_A Putative methyltransfer 99.8 2E-19 6.8E-24 131.7 7.3 148 7-171 33-181 (261)
46 3i9f_A Putative type 11 methyl 99.8 2.3E-19 8E-24 123.1 7.1 139 6-173 15-156 (170)
47 2gb4_A Thiopurine S-methyltran 99.8 3.1E-18 1.1E-22 124.8 12.7 142 8-166 68-225 (252)
48 2vdw_A Vaccinia virus capping 99.8 1.3E-18 4.3E-23 130.0 10.8 112 8-120 48-171 (302)
49 2fk8_A Methoxy mycolic acid sy 99.8 1.7E-18 5.8E-23 130.0 11.5 155 6-166 88-252 (318)
50 3bxo_A N,N-dimethyltransferase 99.8 4.8E-18 1.7E-22 122.3 13.2 105 7-121 39-144 (239)
51 1ve3_A Hypothetical protein PH 99.8 4.9E-18 1.7E-22 121.4 12.8 107 8-120 38-144 (227)
52 3orh_A Guanidinoacetate N-meth 99.8 6.3E-20 2.2E-24 132.6 2.5 108 7-117 59-169 (236)
53 3ccf_A Cyclopropane-fatty-acyl 99.8 1E-18 3.5E-23 128.9 8.8 151 7-170 56-212 (279)
54 3evz_A Methyltransferase; NYSG 99.8 6.2E-18 2.1E-22 121.3 12.4 133 7-165 54-203 (230)
55 3d2l_A SAM-dependent methyltra 99.8 7.1E-18 2.4E-22 121.7 12.6 104 8-118 33-137 (243)
56 3grz_A L11 mtase, ribosomal pr 99.8 2.8E-18 9.7E-23 121.1 10.1 124 7-165 59-182 (205)
57 4hg2_A Methyltransferase type 99.8 3.5E-19 1.2E-23 130.1 5.5 97 8-118 39-135 (257)
58 3bkw_A MLL3908 protein, S-aden 99.8 2.4E-18 8.3E-23 124.2 9.5 103 7-119 42-145 (243)
59 3mti_A RRNA methylase; SAM-dep 99.8 1.4E-18 4.7E-23 120.8 7.8 111 6-119 20-136 (185)
60 2p35_A Trans-aconitate 2-methy 99.8 6.9E-18 2.3E-22 123.0 11.7 148 6-165 31-187 (259)
61 2xvm_A Tellurite resistance pr 99.8 1.2E-17 4.3E-22 116.9 12.5 143 6-167 30-172 (199)
62 2yqz_A Hypothetical protein TT 99.8 8.1E-18 2.8E-22 122.8 11.8 159 6-172 37-200 (263)
63 3m70_A Tellurite resistance pr 99.8 2.3E-17 7.8E-22 122.1 14.1 106 7-119 119-224 (286)
64 2p8j_A S-adenosylmethionine-de 99.8 3.6E-18 1.2E-22 120.7 9.2 110 7-121 22-131 (209)
65 2g72_A Phenylethanolamine N-me 99.8 3E-18 1E-22 127.1 9.0 148 8-166 71-254 (289)
66 3cc8_A Putative methyltransfer 99.8 5.3E-18 1.8E-22 121.2 9.8 147 7-169 31-186 (230)
67 1wzn_A SAM-dependent methyltra 99.8 6.8E-17 2.3E-21 117.3 15.8 107 7-119 40-146 (252)
68 3ofk_A Nodulation protein S; N 99.7 2E-18 6.9E-23 122.7 7.5 106 7-119 50-155 (216)
69 2kw5_A SLR1183 protein; struct 99.7 2.3E-17 7.8E-22 116.1 12.8 145 8-171 30-174 (202)
70 3bkx_A SAM-dependent methyltra 99.7 2.3E-17 7.7E-22 121.3 12.8 159 6-168 41-219 (275)
71 2aot_A HMT, histamine N-methyl 99.7 9.1E-19 3.1E-23 130.1 5.2 147 7-164 51-217 (292)
72 3iv6_A Putative Zn-dependent a 99.7 6.9E-18 2.4E-22 123.2 9.3 103 5-118 42-148 (261)
73 3lpm_A Putative methyltransfer 99.7 1.8E-17 6.1E-22 121.2 11.5 132 8-165 49-198 (259)
74 3i53_A O-methyltransferase; CO 99.7 2.2E-17 7.4E-22 124.8 12.2 148 7-165 168-318 (332)
75 3m33_A Uncharacterized protein 99.7 1.2E-17 4.1E-22 119.7 10.3 124 7-172 47-171 (226)
76 3njr_A Precorrin-6Y methylase; 99.7 9.4E-17 3.2E-21 113.5 14.7 126 6-166 53-178 (204)
77 3hm2_A Precorrin-6Y C5,15-meth 99.7 3.7E-17 1.3E-21 112.6 12.2 127 6-165 23-150 (178)
78 3dp7_A SAM-dependent methyltra 99.7 6.1E-17 2.1E-21 123.8 14.3 156 7-166 178-340 (363)
79 3gu3_A Methyltransferase; alph 99.7 2E-18 6.7E-23 127.9 5.6 107 6-120 20-128 (284)
80 3cgg_A SAM-dependent methyltra 99.7 6.5E-17 2.2E-21 112.6 12.8 127 7-165 45-172 (195)
81 3e05_A Precorrin-6Y C5,15-meth 99.7 1.5E-16 5E-21 112.2 14.6 124 6-162 38-162 (204)
82 1zx0_A Guanidinoacetate N-meth 99.7 9.3E-19 3.2E-23 126.3 2.9 108 7-117 59-169 (236)
83 4e2x_A TCAB9; kijanose, tetron 99.7 2E-19 6.9E-24 139.8 -0.7 147 7-167 106-252 (416)
84 3mcz_A O-methyltransferase; ad 99.7 1.3E-17 4.4E-22 126.9 8.9 157 6-165 176-336 (352)
85 3gwz_A MMCR; methyltransferase 99.7 3.6E-17 1.2E-21 125.3 11.4 155 6-167 200-355 (369)
86 3p9n_A Possible methyltransfer 99.7 2E-17 6.9E-22 115.4 8.9 110 7-120 43-155 (189)
87 3hp7_A Hemolysin, putative; st 99.7 5.3E-18 1.8E-22 125.3 6.1 147 7-167 84-231 (291)
88 3q7e_A Protein arginine N-meth 99.7 3.2E-17 1.1E-21 124.7 10.2 110 5-117 63-172 (349)
89 3fpf_A Mtnas, putative unchara 99.7 3E-17 1E-21 121.2 9.6 103 5-118 119-222 (298)
90 2frn_A Hypothetical protein PH 99.7 1.4E-16 4.6E-21 117.7 13.0 131 8-166 125-255 (278)
91 2nxc_A L11 mtase, ribosomal pr 99.7 6.2E-17 2.1E-21 118.1 10.3 132 7-174 119-253 (254)
92 1vlm_A SAM-dependent methyltra 99.7 1.1E-17 3.7E-22 119.3 5.8 142 8-168 47-188 (219)
93 4df3_A Fibrillarin-like rRNA/T 99.7 1.3E-16 4.4E-21 114.4 11.3 107 2-117 71-181 (233)
94 3p2e_A 16S rRNA methylase; met 99.7 1.6E-17 5.5E-22 119.1 6.6 149 7-166 23-183 (225)
95 2fyt_A Protein arginine N-meth 99.7 1.3E-16 4.5E-21 120.9 11.5 109 5-116 61-169 (340)
96 3g5t_A Trans-aconitate 3-methy 99.7 6.6E-17 2.2E-21 120.4 9.3 105 8-118 36-149 (299)
97 1qzz_A RDMB, aclacinomycin-10- 99.7 4.4E-17 1.5E-21 124.8 8.4 154 6-166 180-337 (374)
98 3q87_B N6 adenine specific DNA 99.7 2.8E-16 9.7E-21 107.9 11.6 121 7-167 22-148 (170)
99 2r3s_A Uncharacterized protein 99.7 5.5E-17 1.9E-21 122.5 8.4 155 7-166 164-321 (335)
100 1x19_A CRTF-related protein; m 99.7 4E-16 1.4E-20 119.1 13.2 155 6-166 188-346 (359)
101 3fzg_A 16S rRNA methylase; met 99.7 3.6E-17 1.2E-21 112.9 6.6 101 7-116 48-150 (200)
102 2ift_A Putative methylase HI07 99.7 8.9E-17 3E-21 113.3 8.8 109 8-121 53-166 (201)
103 3r0q_C Probable protein argini 99.7 1.2E-16 4.1E-21 122.7 10.1 110 4-117 59-168 (376)
104 3bgv_A MRNA CAP guanine-N7 met 99.7 6.3E-17 2.2E-21 121.3 8.3 112 8-120 34-157 (313)
105 1yzh_A TRNA (guanine-N(7)-)-me 99.7 5.6E-16 1.9E-20 110.1 12.7 108 8-118 41-156 (214)
106 3mq2_A 16S rRNA methyltransfer 99.7 4E-17 1.4E-21 116.2 6.7 151 6-166 25-182 (218)
107 1tw3_A COMT, carminomycin 4-O- 99.7 1.1E-16 3.8E-21 122.0 9.3 154 7-166 182-337 (360)
108 2ip2_A Probable phenazine-spec 99.7 9E-17 3.1E-21 121.4 8.7 150 10-165 169-319 (334)
109 2pxx_A Uncharacterized protein 99.7 1.4E-16 4.8E-21 112.8 9.0 110 7-121 41-162 (215)
110 3eey_A Putative rRNA methylase 99.7 1.1E-16 3.9E-21 112.1 8.3 112 6-118 20-139 (197)
111 1nt2_A Fibrillarin-like PRE-rR 99.7 2.7E-16 9.1E-21 111.6 10.3 102 6-117 55-160 (210)
112 3kr9_A SAM-dependent methyltra 99.7 7.4E-16 2.5E-20 109.9 12.4 132 7-172 14-152 (225)
113 3lst_A CALO1 methyltransferase 99.7 9.2E-17 3.1E-21 122.1 7.7 152 6-166 182-334 (348)
114 2esr_A Methyltransferase; stru 99.7 2.9E-17 9.8E-22 113.3 4.5 111 6-121 29-141 (177)
115 1xdz_A Methyltransferase GIDB; 99.7 1E-16 3.5E-21 115.9 7.5 127 7-165 69-199 (240)
116 2gs9_A Hypothetical protein TT 99.7 1.6E-16 5.4E-21 112.5 8.3 99 8-121 36-135 (211)
117 1dus_A MJ0882; hypothetical pr 99.7 4.4E-16 1.5E-20 108.3 10.3 105 7-117 51-156 (194)
118 2yxd_A Probable cobalt-precorr 99.7 9.1E-16 3.1E-20 105.8 11.6 122 6-165 33-154 (183)
119 2fpo_A Methylase YHHF; structu 99.7 1.2E-16 4E-21 112.8 7.0 108 8-121 54-163 (202)
120 1fbn_A MJ fibrillarin homologu 99.7 5.7E-16 2E-20 111.3 10.7 102 6-117 72-177 (230)
121 4hc4_A Protein arginine N-meth 99.7 3.3E-16 1.1E-20 119.6 9.6 111 3-117 78-188 (376)
122 3ggd_A SAM-dependent methyltra 99.7 2.1E-16 7.1E-21 114.4 7.7 108 6-120 54-165 (245)
123 1l3i_A Precorrin-6Y methyltran 99.7 4.1E-16 1.4E-20 108.3 9.0 127 6-165 31-157 (192)
124 2avn_A Ubiquinone/menaquinone 99.7 3E-16 1E-20 114.6 8.5 101 8-120 54-154 (260)
125 3g89_A Ribosomal RNA small sub 99.7 1.8E-16 6.1E-21 115.3 7.0 128 7-165 79-209 (249)
126 3lec_A NADB-rossmann superfami 99.7 1.9E-15 6.5E-20 108.0 12.1 133 7-172 20-158 (230)
127 1g6q_1 HnRNP arginine N-methyl 99.7 6.9E-16 2.4E-20 116.4 10.4 109 6-117 36-144 (328)
128 3dmg_A Probable ribosomal RNA 99.6 8.1E-16 2.8E-20 118.1 10.7 107 7-118 232-340 (381)
129 3dxy_A TRNA (guanine-N(7)-)-me 99.6 3.3E-16 1.1E-20 111.7 7.6 105 8-118 34-150 (218)
130 2h00_A Methyltransferase 10 do 99.6 1.6E-16 5.5E-21 115.7 6.0 153 8-165 65-235 (254)
131 2ozv_A Hypothetical protein AT 99.6 5.2E-16 1.8E-20 113.5 8.5 111 7-118 35-170 (260)
132 2b3t_A Protein methyltransfera 99.6 2.6E-15 8.9E-20 110.6 12.2 128 8-164 109-259 (276)
133 3opn_A Putative hemolysin; str 99.6 4.3E-17 1.5E-21 117.3 2.5 147 7-166 36-182 (232)
134 3id6_C Fibrillarin-like rRNA/T 99.6 6.4E-15 2.2E-19 105.7 13.5 139 4-166 72-214 (232)
135 3u81_A Catechol O-methyltransf 99.6 5.3E-16 1.8E-20 110.8 7.7 106 7-117 57-169 (221)
136 2fca_A TRNA (guanine-N(7)-)-me 99.6 2.7E-15 9.4E-20 106.6 11.3 108 8-118 38-153 (213)
137 2zfu_A Nucleomethylin, cerebra 99.6 1.4E-15 4.9E-20 107.9 9.8 112 7-166 66-177 (215)
138 4a6d_A Hydroxyindole O-methylt 99.6 1.8E-15 6E-20 115.3 10.9 152 6-165 177-331 (353)
139 4azs_A Methyltransferase WBDD; 99.6 4.9E-17 1.7E-21 130.9 2.4 154 8-175 66-224 (569)
140 3gnl_A Uncharacterized protein 99.6 4.2E-15 1.4E-19 107.0 12.2 133 7-172 20-158 (244)
141 4dcm_A Ribosomal RNA large sub 99.6 7.1E-16 2.4E-20 118.2 8.6 110 7-118 221-334 (375)
142 2fhp_A Methylase, putative; al 99.6 8.5E-17 2.9E-21 111.6 3.2 110 7-121 43-157 (187)
143 3ntv_A MW1564 protein; rossman 99.6 4.6E-16 1.6E-20 111.9 7.1 104 7-117 70-175 (232)
144 3tfw_A Putative O-methyltransf 99.6 1.2E-15 4E-20 110.9 9.1 105 6-117 61-169 (248)
145 2igt_A SAM dependent methyltra 99.6 2.4E-15 8.1E-20 113.6 11.0 108 8-117 153-271 (332)
146 2y1w_A Histone-arginine methyl 99.6 1.2E-15 4.2E-20 115.9 9.2 108 5-117 47-154 (348)
147 3gdh_A Trimethylguanosine synt 99.6 6.5E-17 2.2E-21 116.8 1.7 103 8-117 78-180 (241)
148 1yb2_A Hypothetical protein TA 99.6 2.9E-15 9.8E-20 110.4 10.3 102 5-118 107-211 (275)
149 2pjd_A Ribosomal RNA small sub 99.6 1E-15 3.6E-20 116.1 7.9 106 8-119 196-304 (343)
150 3dr5_A Putative O-methyltransf 99.6 6.4E-16 2.2E-20 110.5 6.2 101 10-117 58-162 (221)
151 3lbf_A Protein-L-isoaspartate 99.6 2.2E-15 7.5E-20 106.5 8.8 102 6-120 75-176 (210)
152 3htx_A HEN1; HEN1, small RNA m 99.6 8.1E-15 2.8E-19 120.2 13.2 111 8-121 721-837 (950)
153 1ws6_A Methyltransferase; stru 99.6 2.2E-16 7.6E-21 108.0 3.4 105 8-121 41-150 (171)
154 3uwp_A Histone-lysine N-methyl 99.6 1.1E-15 3.7E-20 117.1 7.5 106 5-117 170-287 (438)
155 2pwy_A TRNA (adenine-N(1)-)-me 99.6 4.7E-15 1.6E-19 107.9 10.0 127 6-167 94-223 (258)
156 3k6r_A Putative transferase PH 99.6 1.4E-14 4.9E-19 106.5 12.5 131 7-166 124-255 (278)
157 2ipx_A RRNA 2'-O-methyltransfe 99.6 4E-15 1.4E-19 107.0 9.4 105 5-118 74-182 (233)
158 3mb5_A SAM-dependent methyltra 99.6 2E-15 6.8E-20 109.8 7.9 101 6-117 91-193 (255)
159 1u2z_A Histone-lysine N-methyl 99.6 4.5E-15 1.6E-19 115.2 10.3 105 6-117 240-358 (433)
160 1o9g_A RRNA methyltransferase; 99.6 9.8E-16 3.3E-20 111.3 6.1 109 8-117 51-213 (250)
161 1jsx_A Glucose-inhibited divis 99.6 4E-15 1.4E-19 104.9 8.4 99 8-117 65-164 (207)
162 3duw_A OMT, O-methyltransferas 99.6 2.4E-15 8.4E-20 107.3 6.9 104 7-117 57-166 (223)
163 4dzr_A Protein-(glutamine-N5) 99.6 7E-16 2.4E-20 109.0 4.0 105 7-116 29-163 (215)
164 2gpy_A O-methyltransferase; st 99.6 1.9E-15 6.5E-20 108.6 6.3 104 7-117 53-159 (233)
165 1af7_A Chemotaxis receptor met 99.6 5E-15 1.7E-19 108.9 8.6 109 9-120 106-254 (274)
166 1g8a_A Fibrillarin-like PRE-rR 99.6 1.1E-14 3.7E-19 104.2 9.9 103 6-117 71-177 (227)
167 3tr6_A O-methyltransferase; ce 99.6 1.2E-15 4.2E-20 108.9 4.8 104 7-117 63-173 (225)
168 3b3j_A Histone-arginine methyl 99.6 3.2E-15 1.1E-19 117.9 7.6 107 6-117 156-262 (480)
169 1o54_A SAM-dependent O-methylt 99.6 7.4E-15 2.5E-19 108.2 8.9 125 6-165 110-236 (277)
170 1vbf_A 231AA long hypothetical 99.6 9.3E-15 3.2E-19 104.7 8.8 101 6-121 68-168 (231)
171 1sui_A Caffeoyl-COA O-methyltr 99.6 4.8E-15 1.6E-19 107.6 7.3 104 7-117 78-189 (247)
172 3ckk_A TRNA (guanine-N(7)-)-me 99.6 7.4E-15 2.5E-19 105.9 8.2 108 8-118 46-168 (235)
173 3bwc_A Spermidine synthase; SA 99.6 7E-15 2.4E-19 109.8 8.3 136 7-164 94-236 (304)
174 3c3p_A Methyltransferase; NP_9 99.6 1.7E-15 5.9E-20 107.2 4.7 103 7-117 55-159 (210)
175 3reo_A (ISO)eugenol O-methyltr 99.6 7.1E-15 2.4E-19 112.6 8.4 147 6-166 201-353 (368)
176 3p9c_A Caffeic acid O-methyltr 99.6 9.2E-15 3.1E-19 111.8 8.8 147 6-166 199-351 (364)
177 2qe6_A Uncharacterized protein 99.6 4.3E-14 1.5E-18 104.1 12.0 107 9-120 78-198 (274)
178 2yxe_A Protein-L-isoaspartate 99.6 9E-15 3.1E-19 103.7 8.1 104 6-121 75-180 (215)
179 1nv8_A HEMK protein; class I a 99.6 2.2E-14 7.5E-19 106.2 10.1 109 8-120 123-251 (284)
180 1wy7_A Hypothetical protein PH 99.6 1.1E-13 3.8E-18 97.5 13.0 131 7-171 48-178 (207)
181 2yvl_A TRMI protein, hypotheti 99.6 3.7E-14 1.3E-18 102.6 10.7 103 7-120 90-192 (248)
182 1dl5_A Protein-L-isoaspartate 99.5 1.6E-14 5.4E-19 108.5 8.4 103 6-120 73-177 (317)
183 1jg1_A PIMT;, protein-L-isoasp 99.5 1.8E-14 6.1E-19 103.7 8.3 102 6-121 89-192 (235)
184 3r3h_A O-methyltransferase, SA 99.5 9.2E-16 3.1E-20 111.1 1.3 104 7-117 59-169 (242)
185 2hnk_A SAM-dependent O-methylt 99.5 1.1E-14 3.8E-19 105.1 6.6 104 7-117 59-180 (239)
186 2vdv_E TRNA (guanine-N(7)-)-me 99.5 3.4E-14 1.2E-18 103.0 9.2 107 8-117 49-172 (246)
187 3a27_A TYW2, uncharacterized p 99.5 1.4E-14 4.7E-19 106.6 7.0 101 6-117 117-218 (272)
188 1p91_A Ribosomal RNA large sub 99.5 1.9E-14 6.4E-19 105.5 6.9 97 7-121 84-181 (269)
189 4dmg_A Putative uncharacterize 99.5 2.4E-14 8.2E-19 110.3 7.5 106 8-117 214-325 (393)
190 3adn_A Spermidine synthase; am 99.5 4.8E-14 1.6E-18 104.8 8.8 108 8-117 83-197 (294)
191 1fp2_A Isoflavone O-methyltran 99.5 2.2E-14 7.6E-19 109.1 7.1 146 6-166 186-339 (352)
192 1fp1_D Isoliquiritigenin 2'-O- 99.5 1.3E-14 4.4E-19 111.2 5.7 148 6-167 207-359 (372)
193 1ne2_A Hypothetical protein TA 99.5 1.3E-13 4.4E-18 96.8 10.2 124 7-171 50-173 (200)
194 1i1n_A Protein-L-isoaspartate 99.5 2.8E-14 9.6E-19 102.0 6.9 104 6-120 75-184 (226)
195 3v97_A Ribosomal RNA large sub 99.5 2.4E-14 8.1E-19 117.6 7.1 111 7-118 538-657 (703)
196 2b78_A Hypothetical protein SM 99.5 2.2E-14 7.6E-19 110.4 6.2 111 7-118 211-331 (385)
197 1ixk_A Methyltransferase; open 99.5 1.6E-13 5.4E-18 103.0 10.3 109 6-119 116-247 (315)
198 3lcv_B Sisomicin-gentamicin re 99.5 2.7E-14 9.1E-19 103.0 5.7 145 8-174 132-281 (281)
199 3c3y_A Pfomt, O-methyltransfer 99.5 2.1E-14 7.2E-19 103.6 5.3 104 7-117 69-180 (237)
200 2qm3_A Predicted methyltransfe 99.5 3.1E-13 1E-17 103.6 11.9 101 7-114 171-273 (373)
201 3tma_A Methyltransferase; thum 99.5 2.4E-13 8.4E-18 103.5 11.3 110 6-119 201-318 (354)
202 1i9g_A Hypothetical protein RV 99.5 4.8E-14 1.6E-18 103.8 7.0 103 6-118 97-203 (280)
203 2pbf_A Protein-L-isoaspartate 99.5 4.5E-14 1.5E-18 101.0 6.6 105 6-120 78-195 (227)
204 2ld4_A Anamorsin; methyltransf 99.5 7.9E-14 2.7E-18 95.9 7.1 120 3-163 7-130 (176)
205 2avd_A Catechol-O-methyltransf 99.5 2.8E-14 9.6E-19 102.1 4.7 104 7-117 68-178 (229)
206 3frh_A 16S rRNA methylase; met 99.5 3.3E-13 1.1E-17 96.4 9.6 100 7-116 104-204 (253)
207 3c0k_A UPF0064 protein YCCW; P 99.5 5.5E-14 1.9E-18 108.6 6.1 110 7-117 219-338 (396)
208 2b25_A Hypothetical protein; s 99.5 1E-13 3.5E-18 104.9 7.3 107 5-120 102-221 (336)
209 1r18_A Protein-L-isoaspartate( 99.5 4E-14 1.4E-18 101.3 4.8 102 6-119 82-195 (227)
210 3cbg_A O-methyltransferase; cy 99.5 2.2E-14 7.6E-19 103.1 3.4 104 7-117 71-181 (232)
211 2bm8_A Cephalosporin hydroxyla 99.5 6.7E-14 2.3E-18 100.9 6.0 98 7-117 80-186 (236)
212 1zg3_A Isoflavanone 4'-O-methy 99.5 6.3E-14 2.2E-18 106.8 5.7 145 7-165 192-344 (358)
213 3tm4_A TRNA (guanine N2-)-meth 99.4 6.9E-13 2.3E-17 101.7 11.3 127 7-164 216-348 (373)
214 3ajd_A Putative methyltransfer 99.4 9.6E-14 3.3E-18 102.2 6.1 112 7-121 82-214 (274)
215 1wxx_A TT1595, hypothetical pr 99.4 9.7E-14 3.3E-18 106.7 5.8 108 8-118 209-325 (382)
216 2as0_A Hypothetical protein PH 99.4 9.4E-14 3.2E-18 107.3 5.6 109 8-117 217-334 (396)
217 2yx1_A Hypothetical protein MJ 99.4 2.6E-13 8.8E-18 102.7 7.4 97 7-117 194-290 (336)
218 1zq9_A Probable dimethyladenos 99.4 7.9E-13 2.7E-17 97.9 9.8 105 6-117 26-146 (285)
219 1ej0_A FTSJ; methyltransferase 99.4 1.2E-13 4E-18 94.5 4.9 97 7-117 21-135 (180)
220 2pt6_A Spermidine synthase; tr 99.4 6.1E-14 2.1E-18 105.5 3.7 106 8-117 116-229 (321)
221 1iy9_A Spermidine synthase; ro 99.4 1.1E-13 3.7E-18 102.0 4.9 106 8-117 75-188 (275)
222 2plw_A Ribosomal RNA methyltra 99.4 3.9E-13 1.3E-17 94.2 7.5 98 7-117 21-153 (201)
223 2p41_A Type II methyltransfera 99.4 6.1E-13 2.1E-17 99.3 8.8 103 7-118 81-191 (305)
224 2oxt_A Nucleoside-2'-O-methylt 99.4 3.6E-13 1.2E-17 98.6 7.1 103 7-118 73-185 (265)
225 1mjf_A Spermidine synthase; sp 99.4 7.6E-14 2.6E-18 103.1 3.5 106 8-117 75-192 (281)
226 3giw_A Protein of unknown func 99.4 4E-13 1.4E-17 98.2 6.9 109 10-120 80-202 (277)
227 1inl_A Spermidine synthase; be 99.4 1.2E-13 4E-18 102.8 4.1 108 8-117 90-204 (296)
228 3gjy_A Spermidine synthase; AP 99.4 2.7E-13 9.3E-18 101.2 5.8 104 10-119 91-201 (317)
229 2wa2_A Non-structural protein 99.4 3.8E-13 1.3E-17 99.1 6.3 104 7-118 81-193 (276)
230 2b2c_A Spermidine synthase; be 99.4 1.3E-13 4.4E-18 103.3 3.6 106 8-117 108-221 (314)
231 1uir_A Polyamine aminopropyltr 99.4 2.1E-13 7E-18 102.3 4.7 108 8-117 77-194 (314)
232 2o07_A Spermidine synthase; st 99.4 1.3E-13 4.6E-18 102.9 3.6 107 7-117 94-208 (304)
233 2i7c_A Spermidine synthase; tr 99.4 2.2E-13 7.6E-18 100.7 4.3 109 8-118 78-192 (283)
234 2yxl_A PH0851 protein, 450AA l 99.4 2.3E-12 7.9E-17 101.0 10.3 113 6-120 257-391 (450)
235 2nyu_A Putative ribosomal RNA 99.4 1.4E-12 5E-17 90.9 8.3 99 7-118 21-145 (196)
236 2frx_A Hypothetical protein YE 99.4 2E-12 6.7E-17 102.0 9.4 105 8-117 117-245 (479)
237 1xj5_A Spermidine synthase 1; 99.4 2.9E-13 9.8E-18 102.2 4.5 109 8-117 120-234 (334)
238 2jjq_A Uncharacterized RNA met 99.4 3.8E-12 1.3E-16 99.0 10.6 98 7-117 289-386 (425)
239 2h1r_A Dimethyladenosine trans 99.4 4.8E-12 1.6E-16 94.3 10.4 101 6-114 40-155 (299)
240 3dou_A Ribosomal RNA large sub 99.4 6.3E-13 2.2E-17 92.9 4.9 97 7-117 24-138 (191)
241 3m6w_A RRNA methylase; rRNA me 99.3 4.3E-13 1.5E-17 105.0 4.1 109 6-117 99-228 (464)
242 1sqg_A SUN protein, FMU protei 99.3 3.6E-12 1.2E-16 99.4 8.2 111 6-119 244-375 (429)
243 3m4x_A NOL1/NOP2/SUN family pr 99.3 1.2E-12 4.1E-17 102.4 4.7 107 6-117 103-233 (456)
244 2cmg_A Spermidine synthase; tr 99.3 4.5E-13 1.5E-17 98.0 1.6 97 8-117 72-170 (262)
245 2f8l_A Hypothetical protein LM 99.3 3.9E-12 1.3E-16 96.5 6.7 105 8-118 130-256 (344)
246 3sso_A Methyltransferase; macr 99.3 1.6E-12 5.6E-17 99.4 4.1 94 8-117 216-323 (419)
247 1uwv_A 23S rRNA (uracil-5-)-me 99.3 2.5E-11 8.5E-16 94.8 10.4 101 7-117 285-388 (433)
248 2dul_A N(2),N(2)-dimethylguano 99.3 2.6E-12 9.1E-17 98.4 4.5 99 8-118 47-164 (378)
249 3axs_A Probable N(2),N(2)-dime 99.2 4.9E-12 1.7E-16 97.1 5.0 103 8-118 52-158 (392)
250 3k0b_A Predicted N6-adenine-sp 99.2 1.1E-10 3.7E-15 90.0 11.2 112 6-120 199-352 (393)
251 3ldu_A Putative methylase; str 99.2 8.8E-11 3E-15 90.3 9.9 111 6-119 193-345 (385)
252 1qam_A ERMC' methyltransferase 99.2 8.5E-11 2.9E-15 85.0 8.9 101 6-117 28-145 (244)
253 3ldg_A Putative uncharacterize 99.2 2.8E-10 9.6E-15 87.4 12.2 112 6-120 192-345 (384)
254 2okc_A Type I restriction enzy 99.2 4E-11 1.4E-15 93.9 7.6 108 8-118 171-307 (445)
255 2xyq_A Putative 2'-O-methyl tr 99.2 8.3E-11 2.8E-15 86.9 8.3 94 5-117 60-170 (290)
256 2r6z_A UPF0341 protein in RSP 99.2 1.3E-11 4.5E-16 90.0 3.2 79 8-88 83-171 (258)
257 3bt7_A TRNA (uracil-5-)-methyl 99.1 2.4E-11 8.3E-16 93.0 4.5 97 9-117 214-325 (369)
258 2ih2_A Modification methylase 99.1 3.7E-11 1.3E-15 93.2 5.1 98 8-119 39-165 (421)
259 1yub_A Ermam, rRNA methyltrans 99.1 7.2E-12 2.4E-16 90.7 0.4 103 6-119 27-146 (245)
260 3gru_A Dimethyladenosine trans 99.1 6.1E-10 2.1E-14 82.6 10.2 75 6-88 48-124 (295)
261 2b9e_A NOL1/NOP2/SUN domain fa 99.1 9.5E-10 3.3E-14 82.1 9.5 110 6-118 100-234 (309)
262 3ll7_A Putative methyltransfer 99.0 8.8E-11 3E-15 90.5 2.9 76 9-87 94-172 (410)
263 3v97_A Ribosomal RNA large sub 99.0 3.1E-09 1.1E-13 87.4 11.2 114 6-120 188-349 (703)
264 3fut_A Dimethyladenosine trans 99.0 1.4E-09 4.9E-14 79.6 8.1 76 6-92 45-123 (271)
265 2qfm_A Spermine synthase; sper 99.0 3E-10 1E-14 86.0 3.9 109 8-117 188-313 (364)
266 2ar0_A M.ecoki, type I restric 98.9 1.5E-09 5.1E-14 86.9 7.3 110 8-118 169-312 (541)
267 3b5i_A S-adenosyl-L-methionine 98.9 5.9E-09 2E-13 79.5 10.0 113 8-121 52-228 (374)
268 3s1s_A Restriction endonucleas 98.9 6.9E-09 2.4E-13 85.4 10.7 110 8-118 321-465 (878)
269 3tqs_A Ribosomal RNA small sub 98.9 1.9E-09 6.5E-14 78.4 6.7 47 6-54 27-73 (255)
270 2oyr_A UPF0341 protein YHIQ; a 98.9 3E-10 1E-14 82.7 2.4 80 7-88 85-174 (258)
271 3khk_A Type I restriction-modi 98.9 5.8E-09 2E-13 83.4 8.4 105 10-118 246-395 (544)
272 1m6y_A S-adenosyl-methyltransf 98.9 1.6E-09 5.4E-14 80.6 4.6 77 7-86 25-106 (301)
273 4gqb_A Protein arginine N-meth 98.8 9.1E-09 3.1E-13 83.2 8.2 102 8-114 357-463 (637)
274 3lkd_A Type I restriction-modi 98.8 2.7E-08 9.2E-13 79.5 9.9 109 7-118 220-358 (542)
275 2qy6_A UPF0209 protein YFCK; s 98.8 9.5E-09 3.2E-13 74.8 6.2 128 8-165 60-232 (257)
276 3evf_A RNA-directed RNA polyme 98.8 1.6E-08 5.4E-13 73.4 7.2 108 6-120 72-186 (277)
277 3ftd_A Dimethyladenosine trans 98.8 1.1E-08 3.6E-13 74.2 6.1 45 6-51 29-73 (249)
278 3cvo_A Methyltransferase-like 98.8 1.1E-07 3.7E-12 66.6 10.6 99 8-117 30-153 (202)
279 3ua3_A Protein arginine N-meth 98.7 1.8E-08 6.3E-13 81.7 6.6 102 9-114 410-530 (745)
280 2k4m_A TR8_protein, UPF0146 pr 98.7 3.2E-08 1.1E-12 65.1 6.1 82 8-117 35-120 (153)
281 2efj_A 3,7-dimethylxanthine me 98.7 6.7E-08 2.3E-12 73.9 8.4 156 9-166 53-290 (384)
282 3uzu_A Ribosomal RNA small sub 98.6 3.9E-08 1.3E-12 72.4 5.1 44 6-51 40-87 (279)
283 3gcz_A Polyprotein; flavivirus 98.5 6.1E-08 2.1E-12 70.5 4.3 108 6-120 88-203 (282)
284 3o4f_A Spermidine synthase; am 98.5 4.1E-07 1.4E-11 67.1 8.7 107 8-117 83-197 (294)
285 1m6e_X S-adenosyl-L-methionnin 98.5 1.5E-07 5.1E-12 71.4 5.4 111 9-121 52-212 (359)
286 1qyr_A KSGA, high level kasuga 98.5 1.4E-07 4.7E-12 68.4 4.5 73 6-88 19-100 (252)
287 3eld_A Methyltransferase; flav 98.5 7.1E-07 2.4E-11 65.4 8.0 107 7-120 80-193 (300)
288 4fzv_A Putative methyltransfer 98.4 2.2E-07 7.6E-12 70.6 5.4 119 6-125 146-291 (359)
289 2wk1_A NOVP; transferase, O-me 98.2 3.7E-06 1.3E-10 61.8 7.4 103 8-116 106-242 (282)
290 2px2_A Genome polyprotein [con 98.2 3.4E-06 1.1E-10 60.6 6.6 104 6-117 71-182 (269)
291 2zig_A TTHA0409, putative modi 98.2 3E-06 1E-10 62.8 6.1 46 7-54 234-279 (297)
292 3ufb_A Type I restriction-modi 98.2 1.9E-05 6.4E-10 63.1 10.8 107 7-118 216-362 (530)
293 3c6k_A Spermine synthase; sper 98.0 6E-06 2.1E-10 62.8 5.1 108 8-116 205-329 (381)
294 3p8z_A Mtase, non-structural p 98.0 5.4E-06 1.9E-10 58.8 3.8 104 6-117 76-185 (267)
295 4auk_A Ribosomal RNA large sub 98.0 6.1E-05 2.1E-09 57.1 9.5 70 6-88 209-280 (375)
296 1wg8_A Predicted S-adenosylmet 97.9 1.7E-05 5.7E-10 58.0 5.7 73 6-85 20-96 (285)
297 3lkz_A Non-structural protein 97.8 4.3E-05 1.5E-09 55.9 6.5 105 6-117 92-203 (321)
298 2vz8_A Fatty acid synthase; tr 97.8 4.4E-06 1.5E-10 77.1 1.3 101 9-117 1241-1347(2512)
299 2oo3_A Protein involved in cat 97.6 4.3E-05 1.5E-09 55.9 3.7 102 7-116 90-196 (283)
300 3vyw_A MNMC2; tRNA wobble urid 97.4 0.0003 1E-08 52.1 6.3 62 75-166 183-246 (308)
301 4ej6_A Putative zinc-binding d 97.3 0.00096 3.3E-08 50.8 8.4 96 5-117 179-283 (370)
302 3qv2_A 5-cytosine DNA methyltr 97.2 0.0047 1.6E-07 46.3 11.0 71 10-88 11-86 (327)
303 2py6_A Methyltransferase FKBM; 97.1 0.0013 4.4E-08 50.8 7.0 47 7-54 225-274 (409)
304 2c7p_A Modification methylase 97.1 0.0018 6.2E-08 48.5 7.2 47 6-53 8-54 (327)
305 1e3j_A NADP(H)-dependent ketos 97.0 0.0054 1.8E-07 46.2 9.6 95 6-117 166-270 (352)
306 3s2e_A Zinc-containing alcohol 97.0 0.00011 3.8E-09 55.2 0.3 96 5-117 163-262 (340)
307 1f8f_A Benzyl alcohol dehydrog 97.0 0.00048 1.6E-08 52.4 3.8 96 5-117 187-288 (371)
308 1pl8_A Human sorbitol dehydrog 97.0 0.0039 1.3E-07 47.1 8.5 96 5-117 168-272 (356)
309 1i4w_A Mitochondrial replicati 97.0 0.0014 4.8E-08 49.6 5.8 44 8-52 58-102 (353)
310 2d8a_A PH0655, probable L-thre 96.9 0.01 3.5E-07 44.6 10.1 93 8-117 167-266 (348)
311 3m6i_A L-arabinitol 4-dehydrog 96.8 0.0084 2.9E-07 45.3 9.4 97 5-117 176-282 (363)
312 3two_A Mannitol dehydrogenase; 96.8 0.00077 2.6E-08 50.8 3.5 91 5-117 173-264 (348)
313 3ubt_Y Modification methylase 96.8 0.012 4E-07 43.9 9.6 69 11-88 2-71 (331)
314 1pqw_A Polyketide synthase; ro 96.7 0.00094 3.2E-08 46.0 3.1 93 5-117 35-136 (198)
315 1uuf_A YAHK, zinc-type alcohol 96.7 0.0012 4.1E-08 50.2 3.9 96 5-117 191-287 (369)
316 3fpc_A NADP-dependent alcohol 96.7 0.001 3.5E-08 50.2 3.4 96 5-117 163-265 (352)
317 2dph_A Formaldehyde dismutase; 96.7 0.003 1E-07 48.5 5.9 104 5-117 182-298 (398)
318 3r24_A NSP16, 2'-O-methyl tran 96.7 0.0012 4.2E-08 48.4 3.3 93 7-117 108-216 (344)
319 1kol_A Formaldehyde dehydrogen 96.6 0.0052 1.8E-07 47.1 6.9 100 6-117 183-299 (398)
320 3nx4_A Putative oxidoreductase 96.5 0.006 2.1E-07 45.3 6.5 89 11-117 149-240 (324)
321 3uko_A Alcohol dehydrogenase c 96.5 0.0023 8E-08 48.7 4.3 96 5-117 190-294 (378)
322 1cdo_A Alcohol dehydrogenase; 96.5 0.012 4.3E-07 44.6 8.4 96 5-117 189-293 (374)
323 1v3u_A Leukotriene B4 12- hydr 96.5 0.0015 5.2E-08 48.8 3.1 93 5-117 142-243 (333)
324 3uog_A Alcohol dehydrogenase; 96.5 0.0036 1.2E-07 47.4 5.2 95 4-117 185-286 (363)
325 1p0f_A NADP-dependent alcohol 96.5 0.011 3.9E-07 44.7 7.9 96 5-117 188-292 (373)
326 1e3i_A Alcohol dehydrogenase, 96.5 0.014 4.9E-07 44.3 8.4 96 5-117 192-296 (376)
327 2h6e_A ADH-4, D-arabinose 1-de 96.5 0.0025 8.4E-08 47.9 4.0 97 5-117 168-268 (344)
328 2fzw_A Alcohol dehydrogenase c 96.5 0.014 4.8E-07 44.2 8.3 96 5-117 187-291 (373)
329 3qwb_A Probable quinone oxidor 96.4 0.0051 1.7E-07 46.0 5.6 95 5-117 145-246 (334)
330 2jhf_A Alcohol dehydrogenase E 96.4 0.018 6E-07 43.7 8.5 96 5-117 188-292 (374)
331 3gms_A Putative NADPH:quinone 96.4 0.0054 1.9E-07 46.0 5.4 96 4-117 140-242 (340)
332 2j3h_A NADP-dependent oxidored 96.3 0.005 1.7E-07 46.2 5.0 94 5-117 152-254 (345)
333 1rjw_A ADH-HT, alcohol dehydro 96.3 0.0093 3.2E-07 44.7 6.4 92 6-117 162-260 (339)
334 3jyn_A Quinone oxidoreductase; 96.3 0.0064 2.2E-07 45.3 5.4 95 5-117 137-238 (325)
335 4b7c_A Probable oxidoreductase 96.3 0.0014 4.7E-08 49.1 1.7 96 5-117 146-247 (336)
336 4dvj_A Putative zinc-dependent 96.3 0.0069 2.3E-07 45.9 5.5 93 8-117 171-269 (363)
337 3goh_A Alcohol dehydrogenase, 96.2 0.0022 7.5E-08 47.6 2.7 89 5-117 139-228 (315)
338 3ip1_A Alcohol dehydrogenase, 96.2 0.034 1.2E-06 42.7 9.3 100 5-117 210-317 (404)
339 2dq4_A L-threonine 3-dehydroge 96.2 0.0069 2.4E-07 45.4 5.2 90 8-117 164-261 (343)
340 3jv7_A ADH-A; dehydrogenase, n 96.1 0.014 4.8E-07 43.8 6.5 96 5-117 168-269 (345)
341 4dup_A Quinone oxidoreductase; 96.1 0.0027 9.1E-08 48.0 2.5 96 4-117 163-264 (353)
342 1tt7_A YHFP; alcohol dehydroge 96.0 0.0076 2.6E-07 44.9 4.7 95 7-117 148-246 (330)
343 1vj0_A Alcohol dehydrogenase, 96.0 0.0087 3E-07 45.6 5.1 95 6-117 193-297 (380)
344 3tka_A Ribosomal RNA small sub 96.0 0.0065 2.2E-07 45.6 4.1 42 6-48 55-98 (347)
345 1jvb_A NAD(H)-dependent alcoho 96.0 0.0056 1.9E-07 46.0 3.8 96 5-117 167-270 (347)
346 1boo_A Protein (N-4 cytosine-s 96.0 0.013 4.5E-07 43.7 5.7 46 7-54 251-296 (323)
347 2eih_A Alcohol dehydrogenase; 95.9 0.013 4.5E-07 43.9 5.5 93 5-117 163-264 (343)
348 1g55_A DNA cytosine methyltran 95.9 0.01 3.4E-07 44.8 4.8 44 9-53 2-47 (343)
349 4eye_A Probable oxidoreductase 95.9 0.0041 1.4E-07 46.7 2.6 95 5-117 156-256 (342)
350 4dcm_A Ribosomal RNA large sub 95.9 0.066 2.2E-06 40.8 9.2 98 8-117 38-135 (375)
351 1yb5_A Quinone oxidoreductase; 95.8 0.016 5.4E-07 43.7 5.8 94 5-118 167-269 (351)
352 2c0c_A Zinc binding alcohol de 95.8 0.0062 2.1E-07 46.1 3.5 94 6-117 161-260 (362)
353 1qor_A Quinone oxidoreductase; 95.7 0.014 4.8E-07 43.4 5.0 93 5-117 137-238 (327)
354 2hcy_A Alcohol dehydrogenase 1 95.7 0.0061 2.1E-07 45.8 3.0 94 5-117 166-268 (347)
355 1rjd_A PPM1P, carboxy methyl t 95.6 0.097 3.3E-06 39.3 9.1 106 8-117 97-231 (334)
356 1xa0_A Putative NADPH dependen 95.6 0.0081 2.8E-07 44.7 3.2 93 7-117 147-245 (328)
357 2j8z_A Quinone oxidoreductase; 95.6 0.023 7.8E-07 42.8 5.7 95 5-117 159-260 (354)
358 1iz0_A Quinone oxidoreductase; 95.6 0.0029 9.9E-08 46.6 0.7 89 6-117 123-217 (302)
359 1wly_A CAAR, 2-haloacrylate re 95.5 0.027 9.2E-07 42.0 5.9 93 5-117 142-243 (333)
360 3fbg_A Putative arginate lyase 95.5 0.0085 2.9E-07 45.0 3.1 91 8-117 150-247 (346)
361 3krt_A Crotonyl COA reductase; 95.5 0.031 1.1E-06 43.6 6.4 95 5-117 225-343 (456)
362 4a0s_A Octenoyl-COA reductase/ 95.5 0.026 8.7E-07 43.9 5.9 99 4-117 216-335 (447)
363 2cf5_A Atccad5, CAD, cinnamyl 95.4 0.0033 1.1E-07 47.5 0.7 94 8-117 180-274 (357)
364 3g7u_A Cytosine-specific methy 95.4 0.024 8.2E-07 43.3 5.4 42 10-52 3-44 (376)
365 1eg2_A Modification methylase 95.4 0.028 9.6E-07 41.9 5.5 45 7-53 241-288 (319)
366 3ps9_A TRNA 5-methylaminomethy 95.2 0.098 3.4E-06 42.9 8.8 127 10-166 68-239 (676)
367 2b5w_A Glucose dehydrogenase; 95.2 0.013 4.3E-07 44.3 3.3 89 10-117 174-272 (357)
368 3gaz_A Alcohol dehydrogenase s 95.2 0.062 2.1E-06 40.2 6.9 93 4-117 146-245 (343)
369 1yqd_A Sinapyl alcohol dehydro 95.1 0.0069 2.4E-07 45.9 1.4 94 8-117 187-281 (366)
370 3tqh_A Quinone oxidoreductase; 95.0 0.039 1.3E-06 40.9 5.4 94 5-117 149-244 (321)
371 1zkd_A DUF185; NESG, RPR58, st 95.0 0.058 2E-06 41.3 6.3 35 10-44 82-124 (387)
372 3pvc_A TRNA 5-methylaminomethy 94.9 0.035 1.2E-06 45.6 5.4 127 9-166 59-231 (689)
373 4a2c_A Galactitol-1-phosphate 94.7 0.19 6.6E-06 37.4 8.4 96 5-117 157-259 (346)
374 2uyo_A Hypothetical protein ML 94.6 0.31 1.1E-05 36.1 9.3 107 10-119 104-219 (310)
375 3pi7_A NADH oxidoreductase; gr 93.9 0.22 7.4E-06 37.3 7.3 90 10-117 166-262 (349)
376 4eez_A Alcohol dehydrogenase 1 93.9 0.044 1.5E-06 41.0 3.4 96 5-117 160-262 (348)
377 2vn8_A Reticulon-4-interacting 93.8 0.072 2.5E-06 40.4 4.6 94 6-117 181-279 (375)
378 2zb4_A Prostaglandin reductase 93.8 0.03 1E-06 42.1 2.4 93 6-117 156-259 (357)
379 4f3n_A Uncharacterized ACR, CO 93.8 0.17 5.8E-06 39.3 6.5 36 9-44 138-179 (432)
380 4dio_A NAD(P) transhydrogenase 93.6 0.067 2.3E-06 41.2 3.9 38 7-44 188-226 (405)
381 1zsy_A Mitochondrial 2-enoyl t 93.5 0.2 6.8E-06 37.6 6.6 96 5-117 164-269 (357)
382 3tos_A CALS11; methyltransfera 93.1 0.71 2.4E-05 33.2 8.5 104 9-117 70-216 (257)
383 3p2y_A Alanine dehydrogenase/p 93.1 0.026 9.1E-07 43.1 1.1 38 7-44 182-220 (381)
384 2qrv_A DNA (cytosine-5)-methyl 92.8 0.23 7.9E-06 36.5 5.7 42 8-51 15-59 (295)
385 4h0n_A DNMT2; SAH binding, tra 92.6 0.21 7.2E-06 37.4 5.4 42 10-52 4-47 (333)
386 1pjc_A Protein (L-alanine dehy 92.3 0.046 1.6E-06 41.4 1.5 104 7-120 165-269 (361)
387 1gu7_A Enoyl-[acyl-carrier-pro 92.2 0.12 4.1E-06 38.9 3.7 38 5-42 163-203 (364)
388 3ggo_A Prephenate dehydrogenas 92.0 0.58 2E-05 34.6 7.1 87 10-115 34-125 (314)
389 3gqv_A Enoyl reductase; medium 91.9 0.12 3.9E-06 39.2 3.3 93 7-117 163-262 (371)
390 1piw_A Hypothetical zinc-type 91.5 0.25 8.5E-06 37.2 4.7 97 5-117 176-275 (360)
391 3lk7_A UDP-N-acetylmuramoylala 91.3 0.84 2.9E-05 35.5 7.7 41 1-41 1-42 (451)
392 2zig_A TTHA0409, putative modi 90.5 0.12 4E-06 38.0 2.1 46 74-119 36-98 (297)
393 3gvp_A Adenosylhomocysteinase 90.3 0.52 1.8E-05 36.6 5.5 38 6-43 217-255 (435)
394 3zwc_A Peroxisomal bifunctiona 90.1 1.1 3.8E-05 37.3 7.7 151 10-169 317-496 (742)
395 3ado_A Lambda-crystallin; L-gu 90.1 2 6.7E-05 32.0 8.3 107 9-120 6-125 (319)
396 3me5_A Cytosine-specific methy 90.0 0.35 1.2E-05 38.1 4.5 43 9-52 88-130 (482)
397 3slk_A Polyketide synthase ext 89.6 0.099 3.4E-06 43.8 1.1 91 5-117 342-441 (795)
398 2g1u_A Hypothetical protein TM 89.5 0.58 2E-05 30.5 4.6 41 4-44 14-55 (155)
399 2f1k_A Prephenate dehydrogenas 89.3 1.2 4.2E-05 31.9 6.7 85 11-115 2-88 (279)
400 4e12_A Diketoreductase; oxidor 89.2 1.4 4.7E-05 31.9 6.9 100 10-115 5-118 (283)
401 1h2b_A Alcohol dehydrogenase; 88.9 0.72 2.5E-05 34.6 5.4 94 5-117 183-284 (359)
402 3hwr_A 2-dehydropantoate 2-red 88.9 2.1 7E-05 31.6 7.8 99 8-118 18-120 (318)
403 2rir_A Dipicolinate synthase, 88.6 0.56 1.9E-05 34.3 4.5 91 6-117 154-245 (300)
404 3d4o_A Dipicolinate synthase s 88.5 0.66 2.3E-05 33.9 4.8 39 6-44 152-191 (293)
405 3d1l_A Putative NADP oxidoredu 88.4 2.6 8.9E-05 29.9 7.8 89 9-117 10-101 (266)
406 2g5c_A Prephenate dehydrogenas 88.2 1.7 5.7E-05 31.2 6.8 87 11-116 3-94 (281)
407 3k6j_A Protein F01G10.3, confi 87.9 2.8 9.7E-05 32.8 8.2 100 10-117 55-165 (460)
408 3llv_A Exopolyphosphatase-rela 87.1 1.8 6.2E-05 27.4 5.8 37 8-44 5-42 (141)
409 3g0o_A 3-hydroxyisobutyrate de 87.0 1.5 5.2E-05 32.0 6.0 88 9-115 7-99 (303)
410 1zcj_A Peroxisomal bifunctiona 86.9 9.4 0.00032 29.8 10.7 96 10-116 38-148 (463)
411 3i83_A 2-dehydropantoate 2-red 86.9 1.7 5.8E-05 32.0 6.2 101 10-120 3-107 (320)
412 3c85_A Putative glutathione-re 86.8 1.8 6E-05 28.9 5.8 38 7-44 37-76 (183)
413 3fwz_A Inner membrane protein 86.7 2.3 8E-05 27.0 6.1 36 9-44 7-43 (140)
414 2ew2_A 2-dehydropantoate 2-red 86.6 3.1 0.0001 30.1 7.5 99 10-117 4-107 (316)
415 2km1_A Protein DRE2; yeast, an 86.6 0.43 1.5E-05 30.8 2.4 43 72-116 53-96 (136)
416 3oig_A Enoyl-[acyl-carrier-pro 86.6 4.9 0.00017 28.4 8.4 108 7-117 5-146 (266)
417 3qha_A Putative oxidoreductase 86.6 1.2 4.2E-05 32.4 5.3 87 9-116 15-103 (296)
418 3mog_A Probable 3-hydroxybutyr 86.5 4.6 0.00016 31.8 8.7 101 10-116 6-118 (483)
419 3is3_A 17BETA-hydroxysteroid d 86.4 5.9 0.0002 28.1 8.8 108 5-117 14-151 (270)
420 3o26_A Salutaridine reductase; 86.4 4.2 0.00014 29.2 8.1 80 6-88 9-101 (311)
421 3n58_A Adenosylhomocysteinase; 86.1 0.94 3.2E-05 35.4 4.5 38 6-43 244-282 (464)
422 3c24_A Putative oxidoreductase 85.9 6.5 0.00022 28.2 8.9 84 10-115 12-98 (286)
423 2dpo_A L-gulonate 3-dehydrogen 85.9 7.6 0.00026 28.7 9.3 100 10-115 7-120 (319)
424 3pxx_A Carveol dehydrogenase; 85.8 5 0.00017 28.6 8.2 107 6-117 7-152 (287)
425 1boo_A Protein (N-4 cytosine-s 85.5 0.47 1.6E-05 35.2 2.6 45 74-119 29-85 (323)
426 4a7p_A UDP-glucose dehydrogena 85.3 1.2 4.1E-05 34.7 4.9 108 6-117 5-128 (446)
427 2gdz_A NAD+-dependent 15-hydro 85.2 3.6 0.00012 29.1 7.1 38 6-44 4-44 (267)
428 4dkj_A Cytosine-specific methy 84.8 0.77 2.6E-05 35.3 3.5 46 7-53 8-59 (403)
429 3h9u_A Adenosylhomocysteinase; 84.8 1.2 4.2E-05 34.6 4.6 38 6-43 208-246 (436)
430 2vz8_A Fatty acid synthase; tr 84.6 0.74 2.5E-05 43.5 3.9 102 5-117 1664-1769(2512)
431 2cdc_A Glucose dehydrogenase g 84.3 1.3 4.6E-05 33.2 4.7 88 9-117 181-277 (366)
432 4fn4_A Short chain dehydrogena 84.3 5.4 0.00018 28.5 7.6 79 6-88 4-94 (254)
433 3iht_A S-adenosyl-L-methionine 84.3 1.9 6.5E-05 28.6 4.6 32 9-40 41-73 (174)
434 2zyd_A 6-phosphogluconate dehy 84.2 1.1 3.7E-05 35.3 4.2 96 4-115 10-110 (480)
435 2vhw_A Alanine dehydrogenase; 84.0 2.3 7.9E-05 32.2 5.8 102 7-118 166-268 (377)
436 3iup_A Putative NADPH:quinone 83.8 1.6 5.6E-05 32.9 5.0 42 7-49 169-213 (379)
437 3tri_A Pyrroline-5-carboxylate 83.7 2.6 9.1E-05 30.4 5.9 87 9-115 3-95 (280)
438 3swr_A DNA (cytosine-5)-methyl 83.6 1.7 5.8E-05 37.4 5.3 42 9-52 540-583 (1002)
439 3k96_A Glycerol-3-phosphate de 83.6 3.3 0.00011 31.1 6.5 101 9-117 29-132 (356)
440 1x13_A NAD(P) transhydrogenase 83.5 2.1 7.2E-05 32.8 5.4 38 7-44 170-208 (401)
441 4ft4_B DNA (cytosine-5)-methyl 82.9 1.4 4.8E-05 36.8 4.6 42 9-51 212-259 (784)
442 2cvz_A Dehydrogenase, 3-hydrox 82.8 4.6 0.00016 28.9 6.9 83 11-115 3-87 (289)
443 4e21_A 6-phosphogluconate dehy 82.6 2 6.8E-05 32.4 4.9 92 6-115 19-112 (358)
444 3e8x_A Putative NAD-dependent 82.5 9.4 0.00032 26.2 8.2 74 5-88 17-94 (236)
445 1v8b_A Adenosylhomocysteinase; 82.3 1.8 6.3E-05 34.0 4.7 38 6-43 254-292 (479)
446 3ond_A Adenosylhomocysteinase; 82.3 4.9 0.00017 31.7 7.1 38 7-44 263-301 (488)
447 3gt0_A Pyrroline-5-carboxylate 82.0 0.65 2.2E-05 32.9 2.0 34 10-44 3-42 (247)
448 3b1f_A Putative prephenate deh 81.8 6.7 0.00023 28.1 7.4 89 9-115 6-98 (290)
449 3gg2_A Sugar dehydrogenase, UD 81.6 2.4 8.4E-05 33.0 5.2 103 10-116 3-120 (450)
450 1g0o_A Trihydroxynaphthalene r 81.5 6.1 0.00021 28.3 7.1 108 7-117 27-162 (283)
451 3nyw_A Putative oxidoreductase 81.5 10 0.00036 26.5 8.2 80 7-88 5-97 (250)
452 1g60_A Adenine-specific methyl 81.1 1 3.4E-05 32.2 2.7 41 76-117 21-73 (260)
453 4hp8_A 2-deoxy-D-gluconate 3-d 81.0 13 0.00043 26.5 9.0 83 1-89 1-90 (247)
454 3dmg_A Probable ribosomal RNA 81.0 1.2 4.1E-05 33.9 3.2 90 9-117 46-138 (381)
455 3ojo_A CAP5O; rossmann fold, c 80.8 10 0.00034 29.4 8.4 104 6-116 8-127 (431)
456 3grk_A Enoyl-(acyl-carrier-pro 80.5 14 0.00047 26.6 9.1 107 6-117 28-168 (293)
457 3ce6_A Adenosylhomocysteinase; 80.4 3.4 0.00012 32.7 5.7 88 6-117 271-360 (494)
458 1bg6_A N-(1-D-carboxylethyl)-L 80.1 3.5 0.00012 30.5 5.6 98 10-117 5-108 (359)
459 3hn2_A 2-dehydropantoate 2-red 80.1 3.6 0.00012 30.1 5.5 97 10-117 3-102 (312)
460 1l7d_A Nicotinamide nucleotide 79.8 2.8 9.5E-05 31.9 4.9 39 6-44 169-208 (384)
461 3ghy_A Ketopantoate reductase 79.8 1.1 3.9E-05 33.2 2.8 98 9-120 3-106 (335)
462 3v2g_A 3-oxoacyl-[acyl-carrier 79.7 14 0.00048 26.2 9.1 106 7-117 29-164 (271)
463 4dll_A 2-hydroxy-3-oxopropiona 79.2 2.5 8.7E-05 31.1 4.5 88 9-116 31-122 (320)
464 2eez_A Alanine dehydrogenase; 78.3 4.8 0.00017 30.3 5.8 99 7-117 164-265 (369)
465 1eg2_A Modification methylase 78.3 1.3 4.6E-05 32.8 2.7 45 74-119 54-107 (319)
466 2h78_A Hibadh, 3-hydroxyisobut 78.1 2.6 8.9E-05 30.6 4.2 34 10-44 4-39 (302)
467 3iei_A Leucine carboxyl methyl 77.9 4.6 0.00016 30.1 5.5 104 9-116 91-227 (334)
468 3d64_A Adenosylhomocysteinase; 77.8 3.3 0.00011 32.8 4.8 38 6-43 274-312 (494)
469 1leh_A Leucine dehydrogenase; 77.7 5.4 0.00018 30.2 5.9 44 6-49 170-214 (364)
470 1lss_A TRK system potassium up 76.9 6.9 0.00024 24.2 5.6 36 9-44 4-40 (140)
471 3o38_A Short chain dehydrogena 76.5 17 0.00058 25.5 8.3 80 6-88 19-111 (266)
472 4g81_D Putative hexonate dehyd 76.4 8.1 0.00028 27.6 6.3 79 6-89 6-97 (255)
473 1xg5_A ARPG836; short chain de 75.2 14 0.00049 26.1 7.5 80 7-88 30-121 (279)
474 3pef_A 6-phosphogluconate dehy 75.2 2.2 7.7E-05 30.7 3.1 86 10-115 2-92 (287)
475 1zej_A HBD-9, 3-hydroxyacyl-CO 75.0 22 0.00074 25.9 8.7 93 8-116 11-105 (293)
476 3av4_A DNA (cytosine-5)-methyl 74.9 4.3 0.00015 36.1 5.2 41 9-51 851-893 (1330)
477 2hmt_A YUAA protein; RCK, KTN, 74.8 5.1 0.00017 25.0 4.5 38 7-44 4-42 (144)
478 2raf_A Putative dinucleotide-b 74.7 14 0.00048 25.2 7.0 35 7-42 17-53 (209)
479 3h8v_A Ubiquitin-like modifier 74.0 6 0.00021 28.9 5.1 36 6-41 33-70 (292)
480 2p4q_A 6-phosphogluconate dehy 73.8 5.5 0.00019 31.5 5.2 91 9-115 10-106 (497)
481 3rkr_A Short chain oxidoreduct 73.5 15 0.0005 25.9 7.1 79 6-88 26-116 (262)
482 3jtm_A Formate dehydrogenase, 73.2 1.2 4E-05 33.6 1.2 38 6-43 161-199 (351)
483 3sju_A Keto reductase; short-c 72.8 17 0.00058 25.9 7.4 79 5-88 20-111 (279)
484 4fs3_A Enoyl-[acyl-carrier-pro 72.6 18 0.00061 25.4 7.4 78 7-87 4-95 (256)
485 4ezb_A Uncharacterized conserv 72.6 9.8 0.00034 27.9 6.1 31 10-41 25-58 (317)
486 2y0c_A BCEC, UDP-glucose dehyd 72.5 6.3 0.00022 30.9 5.3 108 5-115 4-125 (478)
487 3trk_A Nonstructural polyprote 72.1 0.92 3.2E-05 32.8 0.4 50 73-122 206-263 (324)
488 1id1_A Putative potassium chan 72.1 16 0.00056 23.2 8.4 96 8-117 2-104 (153)
489 3orq_A N5-carboxyaminoimidazol 72.0 5.9 0.0002 29.9 4.9 39 4-42 7-46 (377)
490 4b79_A PA4098, probable short- 71.8 6.7 0.00023 27.8 4.8 41 3-44 5-48 (242)
491 3tjr_A Short chain dehydrogena 71.6 21 0.00071 25.8 7.6 78 7-88 29-118 (301)
492 4hy3_A Phosphoglycerate oxidor 71.6 1.7 5.7E-05 33.0 1.7 37 6-42 173-210 (365)
493 3lyl_A 3-oxoacyl-(acyl-carrier 71.3 20 0.00067 24.8 7.3 77 7-88 3-92 (247)
494 2wtb_A MFP2, fatty acid multif 71.2 24 0.00082 29.3 8.6 98 10-115 313-424 (725)
495 3qiv_A Short-chain dehydrogena 71.0 19 0.00067 24.9 7.2 78 7-88 7-96 (253)
496 3dfz_A SIRC, precorrin-2 dehyd 70.8 24 0.00082 24.6 9.2 35 7-41 29-64 (223)
497 3rku_A Oxidoreductase YMR226C; 70.7 26 0.0009 25.1 8.9 80 7-88 31-125 (287)
498 3g79_A NDP-N-acetyl-D-galactos 70.6 14 0.00048 29.1 6.8 103 9-117 18-146 (478)
499 1yb1_A 17-beta-hydroxysteroid 70.4 25 0.00087 24.7 7.9 79 6-88 28-118 (272)
500 2jah_A Clavulanic acid dehydro 70.3 24 0.00082 24.5 7.7 79 6-88 4-94 (247)
No 1
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.85 E-value=7.5e-21 Score=139.31 Aligned_cols=108 Identities=16% Similarity=0.157 Sum_probs=84.4
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhC---CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEE
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAM---NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLI 82 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~---~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i 82 (175)
..+|.+|||||||+|..+..+++.. +.+|+|+|+|+.|+ +.++++....+...++. +..++....+.+.||+|
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml-~~A~~~~~~~~~~~~v~---~~~~D~~~~~~~~~d~v 143 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMI-ERCRRHIDAYKAPTPVD---VIEGDIRDIAIENASMV 143 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHH-HHHHHHHHTSCCSSCEE---EEESCTTTCCCCSEEEE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHH-HHHHHHHHhhccCceEE---Eeecccccccccccccc
Confidence 3478999999999999999998864 56899999999998 77777776655533333 33344444445679999
Q ss_pred EeCCcccCcccchHHHHHHHHHHhhcCCCCceeecc
Q 030558 83 LASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHL 118 (175)
Q Consensus 83 ~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~ 118 (175)
+++.++++.. .++...++++++++|||||++++..
T Consensus 144 ~~~~~l~~~~-~~~~~~~l~~i~~~LkpGG~lii~e 178 (261)
T 4gek_A 144 VLNFTLQFLE-PSERQALLDKIYQGLNPGGALVLSE 178 (261)
T ss_dssp EEESCGGGSC-HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeeeeeeecC-chhHhHHHHHHHHHcCCCcEEEEEe
Confidence 9999985544 5567789999999999999999873
No 2
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.85 E-value=2.4e-21 Score=141.14 Aligned_cols=149 Identities=13% Similarity=0.088 Sum_probs=104.4
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeC
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILAS 85 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~ 85 (175)
..++.+|||+|||+|..+..+++..+.+|+++|+|+.++ +.++++....+...++..+..+..+ .++ +++||+|++.
T Consensus 34 ~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l-~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~fD~V~~~ 110 (256)
T 1nkv_A 34 MKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFT-AQAKRRAEELGVSERVHFIHNDAAG-YVA-NEKCDVAACV 110 (256)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHH-HHHHHHHHHTTCTTTEEEEESCCTT-CCC-SSCEEEEEEE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHH-HHHHHHHHhcCCCcceEEEECChHh-CCc-CCCCCEEEEC
Confidence 456789999999999999999988788999999999998 7777777766664445555544433 334 6799999999
Q ss_pred CcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCC--CCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCeeE
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEG--TEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVK 163 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 163 (175)
.++++..+ ...+++++.++|||||++++..+....... .+... +....... ..+...+.++++++||++.
T Consensus 111 ~~~~~~~~---~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~l~~aGf~~~ 182 (256)
T 1nkv_A 111 GATWIAGG---FAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQA---CGVSSTSD--FLTLPGLVGAFDDLGYDVV 182 (256)
T ss_dssp SCGGGTSS---SHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHT---TTCSCGGG--SCCHHHHHHHHHTTTBCCC
T ss_pred CChHhcCC---HHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHH---Hhcccccc--cCCHHHHHHHHHHCCCeeE
Confidence 99866554 449999999999999999997543221110 00000 00000011 1235889999999999876
Q ss_pred Ee
Q 030558 164 HL 165 (175)
Q Consensus 164 ~~ 165 (175)
++
T Consensus 183 ~~ 184 (256)
T 1nkv_A 183 EM 184 (256)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 3
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.84 E-value=3.9e-21 Score=141.36 Aligned_cols=155 Identities=14% Similarity=0.110 Sum_probs=107.0
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeC
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILAS 85 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~ 85 (175)
..++.+|||||||+|.++..+++..+.+|+++|+|+.++ +.++++....+...++..+..+.. .+++++++||+|++.
T Consensus 59 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~-~~a~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~ 136 (273)
T 3bus_A 59 VRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQV-NQANARATAAGLANRVTFSYADAM-DLPFEDASFDAVWAL 136 (273)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHH-HHHHHHHHHTTCTTTEEEEECCTT-SCCSCTTCEEEEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHH-HHHHHHHHhcCCCcceEEEECccc-cCCCCCCCccEEEEe
Confidence 346789999999999999999887788999999999998 677777666665444444444432 345667899999999
Q ss_pred CcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCC-CCceEeeeeccCCCcchhHHHHHHHHcCCeeEE
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLP-WPAFLMSWRRRIGKEDETIFFTSCENAGLEVKH 164 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 164 (175)
.++++..+ ...+++++.++|+|||++++............... ...+...+ ......+...+.++++++||++.+
T Consensus 137 ~~l~~~~~---~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~aGf~~~~ 212 (273)
T 3bus_A 137 ESLHHMPD---RGRALREMARVLRPGGTVAIADFVLLAPVEGAKKEAVDAFRAGG-GVLSLGGIDEYESDVRQAELVVTS 212 (273)
T ss_dssp SCTTTSSC---HHHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHHHHHHHHHHHH-TCCCCCCHHHHHHHHHHTTCEEEE
T ss_pred chhhhCCC---HHHHHHHHHHHcCCCeEEEEEEeeccCCCChhHHHHHHHHHhhc-CccCCCCHHHHHHHHHHcCCeEEE
Confidence 99966654 45999999999999999998754432211000000 00000000 011122358899999999999876
Q ss_pred ec
Q 030558 165 LG 166 (175)
Q Consensus 165 ~~ 166 (175)
+.
T Consensus 213 ~~ 214 (273)
T 3bus_A 213 TV 214 (273)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 4
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.84 E-value=6.9e-21 Score=142.84 Aligned_cols=154 Identities=9% Similarity=0.011 Sum_probs=109.2
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeC
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILAS 85 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~ 85 (175)
..++.+|||+|||+|.++..+++..+.+|+++|+++.++ +.++++....+...++..+..+.. .+++.+++||+|++.
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~-~~a~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~fD~V~~~ 192 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQA-DFGNRRARELRIDDHVRSRVCNML-DTPFDKGAVTASWNN 192 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHH-HHHHHHHHHTTCTTTEEEEECCTT-SCCCCTTCEEEEEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHHHHcCCCCceEEEECChh-cCCCCCCCEeEEEEC
Confidence 456889999999999999999887678999999999998 777777777776444555544443 345667899999999
Q ss_pred CcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCeeEEe
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVKHL 165 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 165 (175)
.++++. + ...+++++.++|||||++++..................+...+.. ...+..++.++++++||++.++
T Consensus 193 ~~l~~~-~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~~~~~~~l~~aGf~~~~~ 266 (312)
T 3vc1_A 193 ESTMYV-D---LHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFEC--NIHSRREYLRAMADNRLVPHTI 266 (312)
T ss_dssp SCGGGS-C---HHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTC--CCCBHHHHHHHHHTTTEEEEEE
T ss_pred CchhhC-C---HHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcC--CCCCHHHHHHHHHHCCCEEEEE
Confidence 998555 3 669999999999999999988544432221110000000000111 1224689999999999998776
Q ss_pred cc
Q 030558 166 GS 167 (175)
Q Consensus 166 ~~ 167 (175)
.+
T Consensus 267 ~~ 268 (312)
T 3vc1_A 267 VD 268 (312)
T ss_dssp EE
T ss_pred Ee
Confidence 54
No 5
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.84 E-value=1.5e-21 Score=138.74 Aligned_cols=161 Identities=17% Similarity=0.227 Sum_probs=109.0
Q ss_pred CcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCCccc
Q 030558 10 RRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASDILL 89 (175)
Q Consensus 10 ~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~~l~ 89 (175)
.+|||+|||+|.++..+++..+.+|+++|+|+.++ +.++++....+...++..+..+.. .+++.+++||+|++..+++
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~-~~a~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~D~v~~~~~l~ 122 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMN-EIALKNIADANLNDRIQIVQGDVH-NIPIEDNYADLIVSRGSVF 122 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHH-HHHHHHHHHTTCTTTEEEEECBTT-BCSSCTTCEEEEEEESCGG
T ss_pred CEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHH-HHHHHHHHhccccCceEEEEcCHH-HCCCCcccccEEEECchHh
Confidence 48999999999999999887677899999999998 777777777666444455544443 3456678999999999996
Q ss_pred CcccchHHHHHHHHHHhhcCCCCceeeccccCCCCC-----CCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCeeEE
Q 030558 90 YVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGE-----GTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVKH 164 (175)
Q Consensus 90 ~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 164 (175)
+.. ++..+++++.++|+|||.+++......... .......+.|...........+...+.++++++||++.+
T Consensus 123 ~~~---~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~ 199 (219)
T 3dlc_A 123 FWE---DVATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKNISQENVERFQNVLDEIGISSYE 199 (219)
T ss_dssp GCS---CHHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHHHHTCSSEE
T ss_pred hcc---CHHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhhccccCCHHHHHHHHHHcCCCeEE
Confidence 653 455999999999999999988632221100 000000011111111112222458899999999997544
Q ss_pred ---ecceEEEEecC
Q 030558 165 ---LGSRVYCIKLR 175 (175)
Q Consensus 165 ---~~~~~~~i~~~ 175 (175)
..+..|++..|
T Consensus 200 ~~~~~~~~~~~~~k 213 (219)
T 3dlc_A 200 IILGDEGFWIIISK 213 (219)
T ss_dssp EEEETTEEEEEEBC
T ss_pred EEecCCceEEEEec
Confidence 35667766654
No 6
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.84 E-value=7.5e-21 Score=141.97 Aligned_cols=156 Identities=9% Similarity=0.010 Sum_probs=107.9
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeC
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILAS 85 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~ 85 (175)
..++.+|||||||+|.++..+++..+.+|+++|+|+.++ +.++++....+...++..+..+. .++ +++||+|++.
T Consensus 70 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~-~~a~~~~~~~~~~~~v~~~~~d~---~~~-~~~fD~v~~~ 144 (302)
T 3hem_A 70 LEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQY-AHDKAMFDEVDSPRRKEVRIQGW---EEF-DEPVDRIVSL 144 (302)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHH-HHHHHHHHHSCCSSCEEEEECCG---GGC-CCCCSEEEEE
T ss_pred CCCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHH-HHHHHHHHhcCCCCceEEEECCH---HHc-CCCccEEEEc
Confidence 456789999999999999999988678999999999998 77777777766643444444333 333 6899999999
Q ss_pred CcccCcccc------hHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCC---------ceEeee-eccCCCcchh
Q 030558 86 DILLYVKQY------SNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWP---------AFLMSW-RRRIGKEDET 149 (175)
Q Consensus 86 ~~l~~~~~~------~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~---------~~~~~~-~~~~~~~~~~ 149 (175)
.++.+.++. .+...+++++.++|||||++++................. .|...+ .......+..
T Consensus 145 ~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~s~~ 224 (302)
T 3hem_A 145 GAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFPGGRLPRIS 224 (302)
T ss_dssp SCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCTTCCCCCHH
T ss_pred chHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCCCCCCCCHH
Confidence 999776543 566799999999999999999975433221100000000 111100 0111122358
Q ss_pred HHHHHHHHcCCeeEEec
Q 030558 150 IFFTSCENAGLEVKHLG 166 (175)
Q Consensus 150 ~~~~~~~~~g~~~~~~~ 166 (175)
.+.+.++++||+++++.
T Consensus 225 ~~~~~l~~aGf~~~~~~ 241 (302)
T 3hem_A 225 QVDYYSSNAGWKVERYH 241 (302)
T ss_dssp HHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHhCCcEEEEEE
Confidence 89999999999988764
No 7
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.84 E-value=8.5e-21 Score=141.22 Aligned_cols=155 Identities=15% Similarity=0.189 Sum_probs=107.3
Q ss_pred cccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEe
Q 030558 5 EWIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILA 84 (175)
Q Consensus 5 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~ 84 (175)
...++.+|||+|||+|..+..+++..+.+|+++|+|+.++ +.++++....+...++..+..+.. .+++++++||+|++
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~-~~a~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~ 156 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQN-KRNEEYNNQAGLADNITVKYGSFL-EIPCEDNSYDFIWS 156 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHH-HHHHHHHHHHTCTTTEEEEECCTT-SCSSCTTCEEEEEE
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHH-HHHHHHHHhcCCCcceEEEEcCcc-cCCCCCCCEeEEEe
Confidence 3456889999999999999999887678999999999998 666666655555334444444432 35666789999999
Q ss_pred CCcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCeeEE
Q 030558 85 SDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVKH 164 (175)
Q Consensus 85 ~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 164 (175)
..+++|..+ ...+++++.++|||||.+++..+......... ....+...+. .....+...+.++++++||++.+
T Consensus 157 ~~~l~~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~l~~aGf~~~~ 230 (297)
T 2o57_A 157 QDAFLHSPD---KLKVFQECARVLKPRGVMAITDPMKEDGIDKS--SIQPILDRIK-LHDMGSLGLYRSLAKECGLVTLR 230 (297)
T ss_dssp ESCGGGCSC---HHHHHHHHHHHEEEEEEEEEEEEEECTTCCGG--GGHHHHHHHT-CSSCCCHHHHHHHHHHTTEEEEE
T ss_pred cchhhhcCC---HHHHHHHHHHHcCCCeEEEEEEeccCCCCchH--HHHHHHHHhc-CCCCCCHHHHHHHHHHCCCeEEE
Confidence 999966654 55999999999999999999854432211100 0000000000 00112357889999999999877
Q ss_pred ecc
Q 030558 165 LGS 167 (175)
Q Consensus 165 ~~~ 167 (175)
+.+
T Consensus 231 ~~~ 233 (297)
T 2o57_A 231 TFS 233 (297)
T ss_dssp EEE
T ss_pred EEE
Confidence 643
No 8
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.84 E-value=9.8e-21 Score=138.01 Aligned_cols=149 Identities=17% Similarity=0.165 Sum_probs=107.0
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeC
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILAS 85 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~ 85 (175)
..++.+|||+|||+|..+..+++..+.+|+++|+|+.++ +.++++....+...++..+..+. ..+++.+++||+|++.
T Consensus 44 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~-~~a~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~ 121 (257)
T 3f4k_A 44 LTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFI-EIFNENAVKANCADRVKGITGSM-DNLPFQNEELDLIWSE 121 (257)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHH-HHHHHHHHHTTCTTTEEEEECCT-TSCSSCTTCEEEEEEE
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHH-HHHHHHHHHcCCCCceEEEECCh-hhCCCCCCCEEEEEec
Confidence 446789999999999999999998666999999999998 77777777777644455555555 3455667899999999
Q ss_pred CcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccC-CCcchhHHHHHHHHcCCeeEE
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRI-GKEDETIFFTSCENAGLEVKH 164 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~ 164 (175)
.++++. + ...+++++.++|+|||++++.......... .......+...+ ...+...+.+.++++||++..
T Consensus 122 ~~l~~~-~---~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~ 192 (257)
T 3f4k_A 122 GAIYNI-G---FERGMNEWSKYLKKGGFIAVSEASWFTSER-----PAEIEDFWMDAYPEISVIPTCIDKMERAGYTPTA 192 (257)
T ss_dssp SCSCCC-C---HHHHHHHHHTTEEEEEEEEEEEEEESSSCC-----CHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEEEE
T ss_pred ChHhhc-C---HHHHHHHHHHHcCCCcEEEEEEeeccCCCC-----hHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeEEE
Confidence 999555 3 459999999999999999998543211110 000000011111 112458899999999999876
Q ss_pred e
Q 030558 165 L 165 (175)
Q Consensus 165 ~ 165 (175)
.
T Consensus 193 ~ 193 (257)
T 3f4k_A 193 H 193 (257)
T ss_dssp E
T ss_pred E
Confidence 5
No 9
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.83 E-value=2.8e-20 Score=136.52 Aligned_cols=150 Identities=18% Similarity=0.158 Sum_probs=107.3
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeC
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILAS 85 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~ 85 (175)
..++.+|||||||+|.++..+++..+.+|+|+|+|+.++ +.++++....+...++..+..+. ..+++.+++||+|++.
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~-~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~i~~~ 121 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFI-DIFNRNARQSGLQNRVTGIVGSM-DDLPFRNEELDLIWSE 121 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHH-HHHHHHHHHTTCTTTEEEEECCT-TSCCCCTTCEEEEEES
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHH-HHHHHHHHHcCCCcCcEEEEcCh-hhCCCCCCCEEEEEEc
Confidence 456889999999999999999998566999999999998 77777777766644455555555 3345667899999999
Q ss_pred CcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccC-CCcchhHHHHHHHHcCCeeEE
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRI-GKEDETIFFTSCENAGLEVKH 164 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~ 164 (175)
.++++. ++..+++++.++|+|||.+++.......... .......+...+ ...+...+.+.++++||++.+
T Consensus 122 ~~~~~~----~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~ 192 (267)
T 3kkz_A 122 GAIYNI----GFERGLNEWRKYLKKGGYLAVSECSWFTDER-----PAEINDFWMDAYPEIDTIPNQVAKIHKAGYLPVA 192 (267)
T ss_dssp SCGGGT----CHHHHHHHHGGGEEEEEEEEEEEEEESSSCC-----CHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEEEE
T ss_pred CCceec----CHHHHHHHHHHHcCCCCEEEEEEeeecCCCC-----hHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEE
Confidence 999555 3459999999999999999987543211110 000000010111 122458899999999999876
Q ss_pred ec
Q 030558 165 LG 166 (175)
Q Consensus 165 ~~ 166 (175)
+.
T Consensus 193 ~~ 194 (267)
T 3kkz_A 193 TF 194 (267)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 10
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.83 E-value=1.1e-20 Score=139.92 Aligned_cols=151 Identities=18% Similarity=0.167 Sum_probs=104.6
Q ss_pred CCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCCc
Q 030558 8 ERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASDI 87 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~~ 87 (175)
++.+|||||||+|.++..+++. +.+|+++|+|+.++ +.++++....+....+..+..+..+..++.+++||+|++..+
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 145 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER-GHQVILCDLSAQMI-DRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAV 145 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHH-HHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESC
T ss_pred CCCEEEEeCCcchHHHHHHHHC-CCEEEEEECCHHHH-HHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECch
Confidence 4679999999999999999887 88999999999998 777777766555334444544444333356789999999999
Q ss_pred ccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCC-------------CCCCCCCCceEeeeeccCCCcchhHHHHH
Q 030558 88 LLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGE-------------GTEGLPWPAFLMSWRRRIGKEDETIFFTS 154 (175)
Q Consensus 88 l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (175)
+++.. +...+++++.++|+|||.+++..+...... ........ ... ......+..++.++
T Consensus 146 l~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~l~~~ 218 (285)
T 4htf_A 146 LEWVA---DPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKK-RTL---SPDYPRDPTQVYLW 218 (285)
T ss_dssp GGGCS---CHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC-----C---CCSCCBCHHHHHHH
T ss_pred hhccc---CHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhcccccc-ccC---CCCCCCCHHHHHHH
Confidence 96654 445999999999999999998754322100 01100000 000 01111235899999
Q ss_pred HHHcCCeeEEecc
Q 030558 155 CENAGLEVKHLGS 167 (175)
Q Consensus 155 ~~~~g~~~~~~~~ 167 (175)
++++||++.++..
T Consensus 219 l~~aGf~v~~~~~ 231 (285)
T 4htf_A 219 LEEAGWQIMGKTG 231 (285)
T ss_dssp HHHTTCEEEEEEE
T ss_pred HHHCCCceeeeee
Confidence 9999999887654
No 11
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.83 E-value=3.1e-20 Score=134.37 Aligned_cols=149 Identities=15% Similarity=0.087 Sum_probs=101.4
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASD 86 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~ 86 (175)
.++.+|||||||+|.++..+++. +.+|+|+|+|+.++ +.++++... .+..+..+..+. ..+++||+|++.+
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~-~~a~~~~~~-----~v~~~~~d~~~~--~~~~~fD~v~~~~ 111 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEH-FNDITCVEASEEAI-SHAQGRLKD-----GITYIHSRFEDA--QLPRRYDNIVLTH 111 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTT-CSCEEEEESCHHHH-HHHHHHSCS-----CEEEEESCGGGC--CCSSCEEEEEEES
T ss_pred cCCCcEEEECCCCCHHHHHHHHh-CCcEEEEeCCHHHH-HHHHHhhhC-----CeEEEEccHHHc--CcCCcccEEEEhh
Confidence 46789999999999999999876 67999999999998 565544322 223333333222 3567999999999
Q ss_pred cccCcccchHHHHHHHHHH-hhcCCCCceeeccccCCCCC------CCCCCCCCce-----EeeeeccCCCcchhHHHHH
Q 030558 87 ILLYVKQYSNLIKSLSVLL-KSYKPKDSQVGHLTKNEQGE------GTEGLPWPAF-----LMSWRRRIGKEDETIFFTS 154 (175)
Q Consensus 87 ~l~~~~~~~~~~~~l~~l~-~~l~pgG~~~~~~~~~~~~~------~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 154 (175)
+++|.. +...+++++. ++|||||.+++..+...... .........+ ...+.+. .+..++.++
T Consensus 112 ~l~~~~---~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 185 (250)
T 2p7i_A 112 VLEHID---DPVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCT---YALDTLERD 185 (250)
T ss_dssp CGGGCS---SHHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCC---CCHHHHHHH
T ss_pred HHHhhc---CHHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhccccccccccccc---CCHHHHHHH
Confidence 996655 3459999999 99999999999865443211 0111110000 0001111 235899999
Q ss_pred HHHcCCeeEEecceEE
Q 030558 155 CENAGLEVKHLGSRVY 170 (175)
Q Consensus 155 ~~~~g~~~~~~~~~~~ 170 (175)
++++||++.++....|
T Consensus 186 l~~~Gf~~~~~~~~~~ 201 (250)
T 2p7i_A 186 ASRAGLQVTYRSGIFF 201 (250)
T ss_dssp HHHTTCEEEEEEEEEE
T ss_pred HHHCCCeEEEEeeeEe
Confidence 9999999988865444
No 12
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.83 E-value=1.2e-19 Score=130.30 Aligned_cols=161 Identities=12% Similarity=0.131 Sum_probs=110.9
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCC-cceeeccCCC--CCCCCCCCccEEE
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPA-LPHIKHSWGD--AFPIPNPDWDLIL 83 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~fD~i~ 83 (175)
.++.+|||+|||+|.++..+++. +.+|+++|+|+.++ +.++++....+.... ...+.+..++ ..++.+++||+|+
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~-~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 106 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK-GYSVTGIDINSEAI-RLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAV 106 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHH-HHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhC-CCeEEEEECCHHHH-HHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEE
Confidence 46789999999999999999887 78999999999998 777766655444211 1122333322 3455678999999
Q ss_pred eCCcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCC----------CCCCCCceEe--------e-eeccCC
Q 030558 84 ASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGT----------EGLPWPAFLM--------S-WRRRIG 144 (175)
Q Consensus 84 ~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~----------~~~~~~~~~~--------~-~~~~~~ 144 (175)
+..++++..+......+++++.++|+|||.+++..+........ .......+.. . ..+.+
T Consensus 107 ~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 185 (235)
T 3sm3_A 107 MQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHF- 185 (235)
T ss_dssp EESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECB-
T ss_pred EcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecccccCCcceeeEeC-
Confidence 99999777766777799999999999999999985433211100 0000001111 1 11222
Q ss_pred CcchhHHHHHHHHcCCeeEEecceEEEE
Q 030558 145 KEDETIFFTSCENAGLEVKHLGSRVYCI 172 (175)
Q Consensus 145 ~~~~~~~~~~~~~~g~~~~~~~~~~~~i 172 (175)
+..++.++++++||++..+.+..+..
T Consensus 186 --~~~~l~~ll~~aGf~~~~~~~~~~~~ 211 (235)
T 3sm3_A 186 --TEKELVFLLTDCRFEIDYFRVKELET 211 (235)
T ss_dssp --CHHHHHHHHHTTTEEEEEEEEEEEEC
T ss_pred --CHHHHHHHHHHcCCEEEEEEecceee
Confidence 35899999999999999887665543
No 13
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.83 E-value=1.8e-20 Score=137.00 Aligned_cols=157 Identities=10% Similarity=0.037 Sum_probs=105.3
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASD 86 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~ 86 (175)
.++.+|||+|||+|.++..+++. +.+|+++|+|+.|+ +.++++....+. .++..+..+. ..+++++++||+|+++.
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l-~~a~~~~~~~~~-~~v~~~~~d~-~~l~~~~~~fD~V~~~~ 111 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPF-VKKVVAFDLTEDIL-KVARAFIEGNGH-QQVEYVQGDA-EQMPFTDERFHIVTCRI 111 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGG-SSEEEEEESCHHHH-HHHHHHHHHTTC-CSEEEEECCC--CCCSCTTCEEEEEEES
T ss_pred CCCCEEEEEeCCCCHHHHHHHHh-CCEEEEEeCCHHHH-HHHHHHHHhcCC-CceEEEEecH-HhCCCCCCCEEEEEEhh
Confidence 46789999999999999999887 56999999999998 666666665554 1233333333 23566778999999999
Q ss_pred cccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCC--CCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCeeEE
Q 030558 87 ILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGE--GTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVKH 164 (175)
Q Consensus 87 ~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 164 (175)
+++++. +...+++++.++|+|||++++......... .........+ .. .......+..++.++++++||++..
T Consensus 112 ~l~~~~---d~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~l~~aGf~~~~ 186 (260)
T 1vl5_A 112 AAHHFP---NPASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYNYVEKE-RD-YSHHRAWKKSDWLKMLEEAGFELEE 186 (260)
T ss_dssp CGGGCS---CHHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHHHHHHH-HC-TTCCCCCBHHHHHHHHHHHTCEEEE
T ss_pred hhHhcC---CHHHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHHHHHHh-cC-ccccCCCCHHHHHHHHHHCCCeEEE
Confidence 996665 445999999999999999998743221110 0000000000 00 0001112358899999999999888
Q ss_pred ecceEEEE
Q 030558 165 LGSRVYCI 172 (175)
Q Consensus 165 ~~~~~~~i 172 (175)
+....+.+
T Consensus 187 ~~~~~~~~ 194 (260)
T 1vl5_A 187 LHCFHKTF 194 (260)
T ss_dssp EEEEEEEE
T ss_pred EEEeeccC
Confidence 77665443
No 14
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.82 E-value=1.3e-19 Score=128.54 Aligned_cols=138 Identities=17% Similarity=0.185 Sum_probs=98.3
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASD 86 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~ 86 (175)
.++.+|||+|||+|.++..+++. +.+|+++|+|+.++ +.++++.. . ..+..+.. .++ .+++||+|++..
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~-~~a~~~~~---~----~~~~~d~~-~~~-~~~~fD~v~~~~ 110 (211)
T 3e23_A 42 PAGAKILELGCGAGYQAEAMLAA-GFDVDATDGSPELA-AEASRRLG---R----PVRTMLFH-QLD-AIDAYDAVWAHA 110 (211)
T ss_dssp CTTCEEEESSCTTSHHHHHHHHT-TCEEEEEESCHHHH-HHHHHHHT---S----CCEECCGG-GCC-CCSCEEEEEECS
T ss_pred CCCCcEEEECCCCCHHHHHHHHc-CCeEEEECCCHHHH-HHHHHhcC---C----ceEEeeec-cCC-CCCcEEEEEecC
Confidence 45789999999999999999887 78999999999998 66655541 1 22222222 233 567999999999
Q ss_pred cccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcC-CeeEEe
Q 030558 87 ILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAG-LEVKHL 165 (175)
Q Consensus 87 ~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~ 165 (175)
++++.. .+++..+++++.++|+|||.+++............ ... +... .+...+.++++++| |++.++
T Consensus 111 ~l~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~---~~~----~~~~---~~~~~~~~~l~~aG~f~~~~~ 179 (211)
T 3e23_A 111 CLLHVP-RDELADVLKLIWRALKPGGLFYASYKSGEGEGRDK---LAR----YYNY---PSEEWLRARYAEAGTWASVAV 179 (211)
T ss_dssp CGGGSC-HHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECT---TSC----EECC---CCHHHHHHHHHHHCCCSEEEE
T ss_pred chhhcC-HHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccc---cch----hccC---CCHHHHHHHHHhCCCcEEEEE
Confidence 995554 45778999999999999999999744332211110 000 0111 23589999999999 997776
Q ss_pred c
Q 030558 166 G 166 (175)
Q Consensus 166 ~ 166 (175)
.
T Consensus 180 ~ 180 (211)
T 3e23_A 180 E 180 (211)
T ss_dssp E
T ss_pred E
Confidence 4
No 15
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.82 E-value=2.1e-20 Score=135.19 Aligned_cols=159 Identities=10% Similarity=0.115 Sum_probs=107.2
Q ss_pred cccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEe
Q 030558 5 EWIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILA 84 (175)
Q Consensus 5 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~ 84 (175)
...++.+|||+|||+|.++..+++. +.+|+++|+|+.++ +.++++....+. ..+..+..+. ..+++.+++||+|++
T Consensus 18 ~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~-~~a~~~~~~~~~-~~v~~~~~d~-~~~~~~~~~fD~v~~ 93 (239)
T 1xxl_A 18 ECRAEHRVLDIGAGAGHTALAFSPY-VQECIGVDATKEMV-EVASSFAQEKGV-ENVRFQQGTA-ESLPFPDDSFDIITC 93 (239)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHGGG-SSEEEEEESCHHHH-HHHHHHHHHHTC-CSEEEEECBT-TBCCSCTTCEEEEEE
T ss_pred CcCCCCEEEEEccCcCHHHHHHHHh-CCEEEEEECCHHHH-HHHHHHHHHcCC-CCeEEEeccc-ccCCCCCCcEEEEEE
Confidence 4457889999999999999999887 56999999999998 666666655444 1233343333 345667789999999
Q ss_pred CCcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCC--CCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCee
Q 030558 85 SDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGE--GTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEV 162 (175)
Q Consensus 85 ~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 162 (175)
..+++++. ++..+++++.++|+|||.+++......... ............. ......+..++.++++++||++
T Consensus 94 ~~~l~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ll~~aGf~~ 168 (239)
T 1xxl_A 94 RYAAHHFS---DVRKAVREVARVLKQDGRFLLVDHYAPEDPVLDEFVNHLNRLRDP--SHVRESSLSEWQAMFSANQLAY 168 (239)
T ss_dssp ESCGGGCS---CHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHCT--TCCCCCBHHHHHHHHHHTTEEE
T ss_pred CCchhhcc---CHHHHHHHHHHHcCCCcEEEEEEcCCCCChhHHHHHHHHHHhccc--cccCCCCHHHHHHHHHHCCCcE
Confidence 99996665 445999999999999999998743321110 0000000000000 0011123588999999999998
Q ss_pred EEecceEEEE
Q 030558 163 KHLGSRVYCI 172 (175)
Q Consensus 163 ~~~~~~~~~i 172 (175)
..+....+.+
T Consensus 169 ~~~~~~~~~~ 178 (239)
T 1xxl_A 169 QDIQKWNLPI 178 (239)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEeecCcc
Confidence 8887665543
No 16
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.82 E-value=2.1e-20 Score=136.66 Aligned_cols=151 Identities=15% Similarity=0.173 Sum_probs=103.8
Q ss_pred cccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEe
Q 030558 5 EWIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILA 84 (175)
Q Consensus 5 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~ 84 (175)
...++.+|||+|||+|.++..+++..+.+|+++|+|+.++ +.++++.... ..+..+..+.. ..++++++||+|++
T Consensus 52 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~-~~a~~~~~~~---~~~~~~~~d~~-~~~~~~~~fD~v~~ 126 (266)
T 3ujc_A 52 ELNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIV-NMANERVSGN---NKIIFEANDIL-TKEFPENNFDLIYS 126 (266)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHH-HHHHHTCCSC---TTEEEEECCTT-TCCCCTTCEEEEEE
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHhhcC---CCeEEEECccc-cCCCCCCcEEEEeH
Confidence 3456789999999999999999887688999999999998 6655544332 22333333332 34566789999999
Q ss_pred CCcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeee--eccCCCcchhHHHHHHHHcCCee
Q 030558 85 SDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSW--RRRIGKEDETIFFTSCENAGLEV 162 (175)
Q Consensus 85 ~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~ 162 (175)
..++++.. .++...+++++.++|+|||.+++..+...... . .......+ .......+...+.++++++||++
T Consensus 127 ~~~l~~~~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 200 (266)
T 3ujc_A 127 RDAILALS-LENKNKLFQKCYKWLKPTGTLLITDYCATEKE-N----WDDEFKEYVKQRKYTLITVEEYADILTACNFKN 200 (266)
T ss_dssp ESCGGGSC-HHHHHHHHHHHHHHEEEEEEEEEEEEEESCGG-G----CCHHHHHHHHHHTCCCCCHHHHHHHHHHTTCEE
T ss_pred HHHHHhcC-hHHHHHHHHHHHHHcCCCCEEEEEEeccCCcc-c----chHHHHHHHhcCCCCCCCHHHHHHHHHHcCCeE
Confidence 99995552 36777999999999999999999854332200 0 00000000 01111224588999999999998
Q ss_pred EEec
Q 030558 163 KHLG 166 (175)
Q Consensus 163 ~~~~ 166 (175)
.+..
T Consensus 201 ~~~~ 204 (266)
T 3ujc_A 201 VVSK 204 (266)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7664
No 17
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.82 E-value=5.1e-20 Score=133.01 Aligned_cols=147 Identities=14% Similarity=0.172 Sum_probs=100.2
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASD 86 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~ 86 (175)
.++.+|||||||+|.++..+++. +.+|+++|+|+.++ +.++++... ..+..+..+.. .+++++++||+|++..
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~-~~a~~~~~~----~~~~~~~~d~~-~~~~~~~~fD~v~~~~ 124 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRT-GYKAVGVDISEVMI-QKGKERGEG----PDLSFIKGDLS-SLPFENEQFEAIMAIN 124 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHH-HHHHTTTCB----TTEEEEECBTT-BCSSCTTCEEEEEEES
T ss_pred CCCCeEEEEcCCCCHHHHHHHHc-CCeEEEEECCHHHH-HHHHhhccc----CCceEEEcchh-cCCCCCCCccEEEEcC
Confidence 36789999999999999999887 78999999999998 565544311 23334433332 3456678999999999
Q ss_pred cccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCeeEEec
Q 030558 87 ILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVKHLG 166 (175)
Q Consensus 87 ~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 166 (175)
+++|.. +...+++++.++|+|||.+++............ ......... ......+..++.++++++||++.+..
T Consensus 125 ~l~~~~---~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~l~~~Gf~~~~~~ 198 (242)
T 3l8d_A 125 SLEWTE---EPLRALNEIKRVLKSDGYACIAILGPTAKPREN--SYPRLYGKD-VVCNTMMPWEFEQLVKEQGFKVVDGI 198 (242)
T ss_dssp CTTSSS---CHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGG--GGGGGGTCC-CSSCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred hHhhcc---CHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhh--hhhhhcccc-ccccCCCHHHHHHHHHHcCCEEEEee
Confidence 996654 445999999999999999999864432211000 000000000 01111235789999999999988764
No 18
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.82 E-value=1.2e-19 Score=127.86 Aligned_cols=139 Identities=15% Similarity=0.095 Sum_probs=98.4
Q ss_pred CCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCCcc
Q 030558 9 RRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASDIL 88 (175)
Q Consensus 9 ~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~~l 88 (175)
+.+|||+|||+|.++..+++. +.+|+++|+|+.++ +.++++.. .+..+..+.. .+++.+++||+|++..++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~-~~a~~~~~------~~~~~~~d~~-~~~~~~~~fD~v~~~~~l 112 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL-GHQIEGLEPATRLV-ELARQTHP------SVTFHHGTIT-DLSDSPKRWAGLLAWYSL 112 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT-TCCEEEECCCHHHH-HHHHHHCT------TSEEECCCGG-GGGGSCCCEEEEEEESSS
T ss_pred CCeEEEecCCCCHHHHHHHhc-CCeEEEEeCCHHHH-HHHHHhCC------CCeEEeCccc-ccccCCCCeEEEEehhhH
Confidence 789999999999999999887 78999999999998 55554411 2233333332 234567899999999999
Q ss_pred cCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCeeEEec
Q 030558 89 LYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVKHLG 166 (175)
Q Consensus 89 ~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 166 (175)
++.. .+++..+++++.++|+|||.+++......... .+..... ....+ +...+.++++++||++.++.
T Consensus 113 ~~~~-~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~-~~~~~~~-----~~~~~---~~~~~~~~l~~~Gf~~~~~~ 180 (203)
T 3h2b_A 113 IHMG-PGELPDALVALRMAVEDGGGLLMSFFSGPSLE-PMYHPVA-----TAYRW---PLPELAQALETAGFQVTSSH 180 (203)
T ss_dssp TTCC-TTTHHHHHHHHHHTEEEEEEEEEEEECCSSCE-EECCSSS-----CEEEC---CHHHHHHHHHHTTEEEEEEE
T ss_pred hcCC-HHHHHHHHHHHHHHcCCCcEEEEEEccCCchh-hhhchhh-----hhccC---CHHHHHHHHHHCCCcEEEEE
Confidence 6554 45677999999999999999999754432211 0000000 00111 35889999999999988764
No 19
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.82 E-value=1.9e-19 Score=128.22 Aligned_cols=142 Identities=18% Similarity=0.182 Sum_probs=101.8
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhC--CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEE
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAM--NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLIL 83 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~ 83 (175)
..++.+|||+|||+|.++..+++.. ..+|+++|+|+.++ +.++++....+.. ++..+..+. ...++.+++||+|+
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~-~~a~~~~~~~~~~-~~~~~~~d~-~~~~~~~~~fD~v~ 111 (219)
T 3dh0_A 35 LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMV-NYAWEKVNKLGLK-NVEVLKSEE-NKIPLPDNTVDFIF 111 (219)
T ss_dssp CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHH-HHHHHHHHHHTCT-TEEEEECBT-TBCSSCSSCEEEEE
T ss_pred CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHH-HHHHHHHHHcCCC-cEEEEeccc-ccCCCCCCCeeEEE
Confidence 3467899999999999999998875 46899999999998 6666666655542 233333333 23456678999999
Q ss_pred eCCcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCeeE
Q 030558 84 ASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVK 163 (175)
Q Consensus 84 ~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 163 (175)
+..++++.. +...+++++.++|+|||.+++............ .....+ +..++.+.++++||++.
T Consensus 112 ~~~~l~~~~---~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~---------~~~~~~---~~~~~~~~l~~~Gf~~~ 176 (219)
T 3dh0_A 112 MAFTFHELS---EPLKFLEELKRVAKPFAYLAIIDWKKEERDKGP---------PPEEVY---SEWEVGLILEDAGIRVG 176 (219)
T ss_dssp EESCGGGCS---SHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSC---------CGGGSC---CHHHHHHHHHHTTCEEE
T ss_pred eehhhhhcC---CHHHHHHHHHHHhCCCeEEEEEEecccccccCC---------chhccc---CHHHHHHHHHHCCCEEE
Confidence 999995554 456999999999999999998744332221100 011112 35889999999999866
Q ss_pred Ee
Q 030558 164 HL 165 (175)
Q Consensus 164 ~~ 165 (175)
+.
T Consensus 177 ~~ 178 (219)
T 3dh0_A 177 RV 178 (219)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 20
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.82 E-value=1.4e-19 Score=131.73 Aligned_cols=152 Identities=11% Similarity=0.128 Sum_probs=101.4
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeC
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILAS 85 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~ 85 (175)
..++++|||+|||+|.++..+++....+|+++|+|+.++ +.++++.. ...+..+..+. ..+++.+++||+|++.
T Consensus 42 ~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~-~~a~~~~~----~~~~~~~~~d~-~~~~~~~~~fD~v~~~ 115 (253)
T 3g5l_A 42 DFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERML-TEAKRKTT----SPVVCYEQKAI-EDIAIEPDAYNVVLSS 115 (253)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHH-HHHHHHCC----CTTEEEEECCG-GGCCCCTTCEEEEEEE
T ss_pred ccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHH-HHHHHhhc----cCCeEEEEcch-hhCCCCCCCeEEEEEc
Confidence 346889999999999999999887444899999999998 66655543 12233443333 2345667899999999
Q ss_pred CcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCC-------------------CCCCCCCCceEee----eecc
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGE-------------------GTEGLPWPAFLMS----WRRR 142 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~----~~~~ 142 (175)
.++++. +++..+++++.++|+|||.+++......... ..++... ..... ....
T Consensus 116 ~~l~~~---~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 191 (253)
T 3g5l_A 116 LALHYI---ASFDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNES-MRTSHFLGEDVQK 191 (253)
T ss_dssp SCGGGC---SCHHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCC-EEEEEETTEEEEE
T ss_pred hhhhhh---hhHHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEEeccccccc-eEEEeeccccCcc
Confidence 999555 3456999999999999999999733221000 0000000 00000 0011
Q ss_pred CCCcchhHHHHHHHHcCCeeEEecce
Q 030558 143 IGKEDETIFFTSCENAGLEVKHLGSR 168 (175)
Q Consensus 143 ~~~~~~~~~~~~~~~~g~~~~~~~~~ 168 (175)
+ ..+..++.++++++||+++++.+.
T Consensus 192 ~-~~t~~~~~~~l~~aGF~~~~~~e~ 216 (253)
T 3g5l_A 192 Y-HRTVTTYIQTLLKNGFQINSVIEP 216 (253)
T ss_dssp E-CCCHHHHHHHHHHTTEEEEEEECC
T ss_pred E-ecCHHHHHHHHHHcCCeeeeeecC
Confidence 1 114589999999999999887653
No 21
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.82 E-value=2.6e-20 Score=136.65 Aligned_cols=152 Identities=16% Similarity=0.105 Sum_probs=98.1
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCC--------------------------
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITP-------------------------- 59 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~-------------------------- 59 (175)
..++.+|||||||+|.++..++.....+|+|+|+|+.|+ +.++++...+....
T Consensus 53 ~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l-~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~ 131 (263)
T 2a14_A 53 GLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNR-EELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKL 131 (263)
T ss_dssp SCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHH-HHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred CCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHH-HHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHH
Confidence 356789999999999988777666344799999999998 66655544321100
Q ss_pred --Ccc-eeeccCCCCCCC---CCCCccEEEeCCcccCc-ccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCC
Q 030558 60 --ALP-HIKHSWGDAFPI---PNPDWDLILASDILLYV-KQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPW 132 (175)
Q Consensus 60 --~~~-~~~~~~~~~~~~---~~~~fD~i~~~~~l~~~-~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~ 132 (175)
.+. .+..+..+..++ ..++||+|+++.++++. .+.+++..++++++++|||||.|++........ +....
T Consensus 132 ~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~---~~~g~ 208 (263)
T 2a14_A 132 RAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPS---YMVGK 208 (263)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCE---EEETT
T ss_pred HhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCcc---ceeCC
Confidence 001 223333332232 35689999999998553 345678899999999999999999974221100 00000
Q ss_pred CceEeeeeccCCCcchhHHHHHHHHcCCeeEEecc
Q 030558 133 PAFLMSWRRRIGKEDETIFFTSCENAGLEVKHLGS 167 (175)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 167 (175)
..+... ..+.+++.+.++++||++.++..
T Consensus 209 ----~~~~~~--~~~~~~l~~~l~~aGF~i~~~~~ 237 (263)
T 2a14_A 209 ----REFSCV--ALEKGEVEQAVLDAGFDIEQLLH 237 (263)
T ss_dssp ----EEEECC--CCCHHHHHHHHHHTTEEEEEEEE
T ss_pred ----eEeecc--ccCHHHHHHHHHHCCCEEEEEee
Confidence 001111 11357899999999999877743
No 22
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.82 E-value=1.5e-19 Score=128.89 Aligned_cols=108 Identities=17% Similarity=0.201 Sum_probs=80.1
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCC-CcEEEEeCChHHHHHHHHHHHhhCCCCC----CcceeeccCCCCCCCCCCCccE
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMN-LDITTSDYNDQEIEDNIAYNSTTNGITP----ALPHIKHSWGDAFPIPNPDWDL 81 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~~~D~s~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~fD~ 81 (175)
.++.+|||+|||+|.++..+++... .+|+++|+|+.++ +.++++....+... .+..+..+. ...+..+++||+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~-~~a~~~~~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~ 105 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVL-ERAKDRLKIDRLPEMQRKRISLFQSSL-VYRDKRFSGYDA 105 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHH-HHHHHHHTGGGSCHHHHTTEEEEECCS-SSCCGGGTTCSE
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHH-HHHHHHHHhhccccccCcceEEEeCcc-cccccccCCCCE
Confidence 4678999999999999999988643 6899999999998 67666665544321 233333333 233445679999
Q ss_pred EEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 82 ILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 82 i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
|++..++.+.. .+++..+++++.++|+|||.++.+
T Consensus 106 V~~~~~l~~~~-~~~~~~~l~~~~~~LkpgG~~i~~ 140 (219)
T 3jwg_A 106 ATVIEVIEHLD-ENRLQAFEKVLFEFTRPQTVIVST 140 (219)
T ss_dssp EEEESCGGGCC-HHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred EEEHHHHHhCC-HHHHHHHHHHHHHhhCCCEEEEEc
Confidence 99999995553 455679999999999999955544
No 23
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.82 E-value=1.2e-19 Score=131.21 Aligned_cols=142 Identities=13% Similarity=0.103 Sum_probs=98.2
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCC-CCCCCCccEEEeC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAF-PIPNPDWDLILAS 85 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~fD~i~~~ 85 (175)
.++++|||||||+|.++..+++. +.+|+|+|+|+.++ +.++.+ +..+..+..+.. ++.+++||+|++.
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~-~~a~~~---------~~~~~~d~~~~~~~~~~~~fD~i~~~ 108 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEE-GIESIGVDINEDMI-KFCEGK---------FNVVKSDAIEYLKSLPDKYLDGVMIS 108 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHH-TCCEEEECSCHHHH-HHHHTT---------SEEECSCHHHHHHTSCTTCBSEEEEE
T ss_pred cCCCeEEEEeCCCCHHHHHHHhC-CCcEEEEECCHHHH-HHHHhh---------cceeeccHHHHhhhcCCCCeeEEEEC
Confidence 46789999999999999999887 78999999999998 555543 122322222222 5567899999999
Q ss_pred CcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCeeEEe
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVKHL 165 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 165 (175)
.++.+.. .+++..+++++.++|||||.+++..+......... ..+.. . ......+...+.++++++||++..+
T Consensus 109 ~~l~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~----~~~~~-~-~~~~~~~~~~l~~~l~~aGf~~~~~ 181 (240)
T 3dli_A 109 HFVEHLD-PERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLI----NFYID-P-THKKPVHPETLKFILEYLGFRDVKI 181 (240)
T ss_dssp SCGGGSC-GGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHH----HHTTS-T-TCCSCCCHHHHHHHHHHHTCEEEEE
T ss_pred CchhhCC-cHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHH----HHhcC-c-cccccCCHHHHHHHHHHCCCeEEEE
Confidence 9996555 45667999999999999999999865432111000 00000 0 0011113488999999999997765
Q ss_pred c
Q 030558 166 G 166 (175)
Q Consensus 166 ~ 166 (175)
.
T Consensus 182 ~ 182 (240)
T 3dli_A 182 E 182 (240)
T ss_dssp E
T ss_pred E
Confidence 4
No 24
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.81 E-value=2e-19 Score=128.41 Aligned_cols=144 Identities=19% Similarity=0.174 Sum_probs=97.0
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCC--CCCC-CCCCccEEE
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGD--AFPI-PNPDWDLIL 83 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~fD~i~ 83 (175)
.++.+|||+|||+|.++..+++. +.+|+++|+|+.++ +.++++ . .......+..+ ..+. ..++||+|+
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~-~~a~~~---~----~~~~~~~~~~~~~~~~~~~~~~fD~v~ 121 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADR-GIEAVGVDGDRTLV-DAARAA---G----AGEVHLASYAQLAEAKVPVGKDYDLIC 121 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTT-TCEEEEEESCHHHH-HHHHHT---C----SSCEEECCHHHHHTTCSCCCCCEEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHC-CCEEEEEcCCHHHH-HHHHHh---c----ccccchhhHHhhcccccccCCCccEEE
Confidence 35789999999999999999887 78999999999998 555544 1 12233322221 1232 344699999
Q ss_pred eCCcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEe-----------eeeccCCCcchhHHH
Q 030558 84 ASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLM-----------SWRRRIGKEDETIFF 152 (175)
Q Consensus 84 ~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~ 152 (175)
+..+++ . +++..+++++.++|+|||.+++..+.......... ...|.. .....+ .+..++.
T Consensus 122 ~~~~l~-~---~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 193 (227)
T 3e8s_A 122 ANFALL-H---QDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDY--QDGWREESFAGFAGDWQPMPWYF--RTLASWL 193 (227)
T ss_dssp EESCCC-S---SCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCC--SCEEEEECCTTSSSCCCCEEEEE--CCHHHHH
T ss_pred ECchhh-h---hhHHHHHHHHHHHhCCCeEEEEEecCccccCcccc--ccccchhhhhccccCcccceEEE--ecHHHHH
Confidence 999984 3 34559999999999999999998655433221100 001110 000111 1358999
Q ss_pred HHHHHcCCeeEEecc
Q 030558 153 TSCENAGLEVKHLGS 167 (175)
Q Consensus 153 ~~~~~~g~~~~~~~~ 167 (175)
++++++||++.++.+
T Consensus 194 ~~l~~aGf~~~~~~~ 208 (227)
T 3e8s_A 194 NALDMAGLRLVSLQE 208 (227)
T ss_dssp HHHHHTTEEEEEEEC
T ss_pred HHHHHcCCeEEEEec
Confidence 999999999988754
No 25
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.81 E-value=1.2e-19 Score=129.36 Aligned_cols=152 Identities=18% Similarity=0.072 Sum_probs=97.3
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCC-CcEEEEeCChHHHHHHHHHHHhhCCCCC----CcceeeccCCCCCCCCCCCccE
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMN-LDITTSDYNDQEIEDNIAYNSTTNGITP----ALPHIKHSWGDAFPIPNPDWDL 81 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~~~D~s~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~fD~ 81 (175)
.++++|||+|||+|.++..+++... .+|+++|+|+.++ +.++++....+... ++..+..+. ...+...++||+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~-~~a~~~~~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~ 105 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSL-EIAQERLDRLRLPRNQWERLQLIQGAL-TYQDKRFHGYDA 105 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHH-HHHHHHHTTCCCCHHHHTTEEEEECCT-TSCCGGGCSCSE
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHH-HHHHHHHHHhcCCcccCcceEEEeCCc-ccccccCCCcCE
Confidence 4678999999999999999988643 6899999999998 77777766555421 233333332 223344578999
Q ss_pred EEeCCcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCC-CCCCCCCCCceEeeeeccCCCcchhHHH----HHHH
Q 030558 82 ILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQG-EGTEGLPWPAFLMSWRRRIGKEDETIFF----TSCE 156 (175)
Q Consensus 82 i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 156 (175)
|++..++++.. .+++..+++++.++|+|||.++++....... ...+.. .......+...+ +..++. ++++
T Consensus 106 v~~~~~l~~~~-~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~l~~~~~~~~~ 180 (217)
T 3jwh_A 106 ATVIEVIEHLD-LSRLGAFERVLFEFAQPKIVIVTTPNIEYNVKFANLPA-GKLRHKDHRFEW---TRSQFQNWANKITE 180 (217)
T ss_dssp EEEESCGGGCC-HHHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHTC------------CCSCB---CHHHHHHHHHHHHH
T ss_pred EeeHHHHHcCC-HHHHHHHHHHHHHHcCCCEEEEEccCcccchhhccccc-cccccccccccc---CHHHHHHHHHHHHH
Confidence 99999996553 4566799999999999999666552211000 000100 000001111112 235666 8889
Q ss_pred HcCCeeEEe
Q 030558 157 NAGLEVKHL 165 (175)
Q Consensus 157 ~~g~~~~~~ 165 (175)
++||+++..
T Consensus 181 ~~Gf~v~~~ 189 (217)
T 3jwh_A 181 RFAYNVQFQ 189 (217)
T ss_dssp HSSEEEEEC
T ss_pred HcCceEEEE
Confidence 999998766
No 26
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.81 E-value=1.7e-19 Score=131.99 Aligned_cols=102 Identities=10% Similarity=0.042 Sum_probs=79.9
Q ss_pred CCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCC-
Q 030558 8 ERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASD- 86 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~- 86 (175)
++.+|||||||+|.++..+++. +.+|+++|+|+.++ +.++++.. .+..+..+..+ ++. +++||+|++..
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~-~~a~~~~~------~~~~~~~d~~~-~~~-~~~fD~v~~~~~ 119 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADS-FGTVEGLELSADML-AIARRRNP------DAVLHHGDMRD-FSL-GRRFSAVTCMFS 119 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTT-SSEEEEEESCHHHH-HHHHHHCT------TSEEEECCTTT-CCC-SCCEEEEEECTT
T ss_pred CCCcEEEeCCcCCHHHHHHHHc-CCeEEEEECCHHHH-HHHHhhCC------CCEEEECChHH-CCc-cCCcCEEEEcCc
Confidence 5689999999999999999887 77999999999998 55554432 22333333322 233 67999999997
Q ss_pred cccCcccchHHHHHHHHHHhhcCCCCceeeccc
Q 030558 87 ILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLT 119 (175)
Q Consensus 87 ~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~ 119 (175)
++.+..+.+++..+++++.++|+|||.+++...
T Consensus 120 ~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 152 (263)
T 3pfg_A 120 SIGHLAGQAELDAALERFAAHVLPDGVVVVEPW 152 (263)
T ss_dssp GGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 887776667888999999999999999999743
No 27
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.81 E-value=8.4e-20 Score=132.77 Aligned_cols=145 Identities=13% Similarity=0.159 Sum_probs=100.5
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASD 86 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~ 86 (175)
.++.+|||||||+|.++..+++....+|+++|+|+.++ +.++++.... ..+..+..+.. .+++.+++||+|++..
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~-~~a~~~~~~~---~~~~~~~~d~~-~~~~~~~~fD~v~~~~ 166 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHML-EEAKRELAGM---PVGKFILASME-TATLPPNTYDLIVIQW 166 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHH-HHHHHHTTTS---SEEEEEESCGG-GCCCCSSCEEEEEEES
T ss_pred cCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHH-HHHHHHhccC---CceEEEEccHH-HCCCCCCCeEEEEEcc
Confidence 35789999999999999999887656799999999998 6666554432 12233333332 2456677999999999
Q ss_pred cccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCeeEEec
Q 030558 87 ILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVKHLG 166 (175)
Q Consensus 87 ~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 166 (175)
++++.. .+++..+++++.++|+|||.+++......... +...........+...+.++++++||++.++.
T Consensus 167 ~l~~~~-~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 236 (254)
T 1xtp_A 167 TAIYLT-DADFVKFFKHCQQALTPNGYIFFKENCSTGDR---------FLVDKEDSSLTRSDIHYKRLFNESGVRVVKEA 236 (254)
T ss_dssp CGGGSC-HHHHHHHHHHHHHHEEEEEEEEEEEEBC--CC---------EEEETTTTEEEBCHHHHHHHHHHHTCCEEEEE
T ss_pred hhhhCC-HHHHHHHHHHHHHhcCCCeEEEEEecCCCccc---------ceecccCCcccCCHHHHHHHHHHCCCEEEEee
Confidence 996554 25677999999999999999999754321111 11100000001135889999999999987764
No 28
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.81 E-value=3.8e-19 Score=126.37 Aligned_cols=151 Identities=13% Similarity=0.041 Sum_probs=99.2
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeC
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILAS 85 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~ 85 (175)
..++.+|||+|||+|.++..+++. +.+|+++|+|+.++ +.+++ .+. ..+..+..+..+. +.+++||+|++.
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~s~~~~-~~a~~----~~~-~~~~~~~~d~~~~--~~~~~~D~v~~~ 114 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLSGL-ADRVTALDGSAEMI-AEAGR----HGL-DNVEFRQQDLFDW--TPDRQWDAVFFA 114 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHHHH-SSEEEEEESCHHHH-HHHGG----GCC-TTEEEEECCTTSC--CCSSCEEEEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHhc-CCeEEEEeCCHHHH-HHHHh----cCC-CCeEEEecccccC--CCCCceeEEEEe
Confidence 345689999999999999999888 78999999999998 55544 222 2233443333322 467799999999
Q ss_pred CcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCC-CCCCCC-CCceEeeeec-------cCCCcchhHHHHHHH
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGE-GTEGLP-WPAFLMSWRR-------RIGKEDETIFFTSCE 156 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~-------~~~~~~~~~~~~~~~ 156 (175)
.++++.. .+.+..+++++.++|+|||.+++......... ...... ...+...... .....+..++.++++
T Consensus 115 ~~l~~~~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 193 (218)
T 3ou2_A 115 HWLAHVP-DDRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERLT 193 (218)
T ss_dssp SCGGGSC-HHHHHHHHHHHHHHEEEEEEEEEEEECCCC------------CEEEEECTTSCEEEEECCCCCHHHHHHHHH
T ss_pred chhhcCC-HHHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhcccccceeeecCCcchhhHhhcCCCHHHHHHHHH
Confidence 9996555 34467999999999999999999855442211 111100 0011111000 011124588999999
Q ss_pred HcCCeeEEec
Q 030558 157 NAGLEVKHLG 166 (175)
Q Consensus 157 ~~g~~~~~~~ 166 (175)
++||+++...
T Consensus 194 ~aGf~v~~~~ 203 (218)
T 3ou2_A 194 ALGWSCSVDE 203 (218)
T ss_dssp HTTEEEEEEE
T ss_pred HCCCEEEeee
Confidence 9999976553
No 29
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.81 E-value=1.3e-19 Score=129.23 Aligned_cols=156 Identities=13% Similarity=0.088 Sum_probs=102.5
Q ss_pred CCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCCc
Q 030558 8 ERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASDI 87 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~~ 87 (175)
++.+|||+|||+|.++..+++. +.+|+++|+|+.++ +.++++.. ..+..+..+.. ..++. ++||+|++..+
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~-~~a~~~~~-----~~~~~~~~d~~-~~~~~-~~fD~v~~~~~ 115 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLA-GRTVYGIEPSREMR-MIAKEKLP-----KEFSITEGDFL-SFEVP-TSIDTIVSTYA 115 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHT-TCEEEEECSCHHHH-HHHHHHSC-----TTCCEESCCSS-SCCCC-SCCSEEEEESC
T ss_pred CCCeEEEeCCCCCHHHHHHHhC-CCeEEEEeCCHHHH-HHHHHhCC-----CceEEEeCChh-hcCCC-CCeEEEEECcc
Confidence 6789999999999999999887 78999999999998 56555433 12233333332 23444 89999999999
Q ss_pred ccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCC------CCC-CCCCceEeeeeccCCCcchhHHHHHHHHcCC
Q 030558 88 LLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEG------TEG-LPWPAFLMSWRRRIGKEDETIFFTSCENAGL 160 (175)
Q Consensus 88 l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 160 (175)
+++..+ +....+++++.++|+|||.+++..+....... ... ...........+.+ ..+..++.++++++||
T Consensus 116 l~~~~~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~aGf 193 (220)
T 3hnr_A 116 FHHLTD-DEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEY-YTRIPVMQTIFENNGF 193 (220)
T ss_dssp GGGSCH-HHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSC-CCBHHHHHHHHHHTTE
T ss_pred hhcCCh-HHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhh-cCCHHHHHHHHHHCCC
Confidence 955543 33345999999999999999997533321110 000 00000000001111 1145899999999999
Q ss_pred eeEEe--cceEEEEec
Q 030558 161 EVKHL--GSRVYCIKL 174 (175)
Q Consensus 161 ~~~~~--~~~~~~i~~ 174 (175)
++... .+..|+++.
T Consensus 194 ~v~~~~~~~~~w~~~~ 209 (220)
T 3hnr_A 194 HVTFTRLNHFVWVMEA 209 (220)
T ss_dssp EEEEEECSSSEEEEEE
T ss_pred EEEEeeccceEEEEee
Confidence 87655 577777764
No 30
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.81 E-value=1.6e-19 Score=130.09 Aligned_cols=140 Identities=13% Similarity=0.131 Sum_probs=99.8
Q ss_pred CCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCC-CCCCccEEEeCC
Q 030558 8 ERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPI-PNPDWDLILASD 86 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~fD~i~~~~ 86 (175)
++.+|||+|||+|.++..+++. +.+|+++|+|+.++ +.++++....+.. ..+.+..++.... .+++||+|++..
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~-~~a~~~~~~~~~~---~~v~~~~~d~~~~~~~~~fD~v~~~~ 140 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASP-ERFVVGLDISESAL-AKANETYGSSPKA---EYFSFVKEDVFTWRPTELFDLIFDYV 140 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBT-TEEEEEECSCHHHH-HHHHHHHTTSGGG---GGEEEECCCTTTCCCSSCEEEEEEES
T ss_pred CCCCEEEeCCCCCHHHHHHHhC-CCeEEEEECCHHHH-HHHHHHhhccCCC---cceEEEECchhcCCCCCCeeEEEECh
Confidence 4569999999999999999775 77899999999998 6666665543221 2233333333322 345899999999
Q ss_pred cccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCeeEEec
Q 030558 87 ILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVKHLG 166 (175)
Q Consensus 87 ~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 166 (175)
++++.. .++...+++++.++|+|||.+++..+......... + +. .+..++.++++++||++.++.
T Consensus 141 ~l~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~----~-~~---------~~~~~~~~~l~~~Gf~~~~~~ 205 (235)
T 3lcc_A 141 FFCAIE-PEMRPAWAKSMYELLKPDGELITLMYPITDHVGGP----P-YK---------VDVSTFEEVLVPIGFKAVSVE 205 (235)
T ss_dssp STTTSC-GGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCS----S-CC---------CCHHHHHHHHGGGTEEEEEEE
T ss_pred hhhcCC-HHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCC----C-cc---------CCHHHHHHHHHHcCCeEEEEE
Confidence 985554 45777999999999999999988755443221111 0 00 135889999999999988764
Q ss_pred c
Q 030558 167 S 167 (175)
Q Consensus 167 ~ 167 (175)
.
T Consensus 206 ~ 206 (235)
T 3lcc_A 206 E 206 (235)
T ss_dssp E
T ss_pred e
Confidence 3
No 31
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.81 E-value=4.4e-19 Score=131.25 Aligned_cols=137 Identities=18% Similarity=0.290 Sum_probs=96.3
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeC-ChHHHHHHHHHHHh-----hCCCC----CCcceeeccCCCCCC-C
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMNLDITTSDY-NDQEIEDNIAYNST-----TNGIT----PALPHIKHSWGDAFP-I 74 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~-s~~~l~~~~~~~~~-----~~~~~----~~~~~~~~~~~~~~~-~ 74 (175)
..++++|||||||+|.+++.+++....+|+++|+ |+.++ +.++++.. .++.. .++....++|++... .
T Consensus 77 ~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~-~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 155 (281)
T 3bzb_A 77 LIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEIL-NSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSL 155 (281)
T ss_dssp GTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHH-HHHHHHHHTTCC----------CCCEEEECCTTSCTHHH
T ss_pred hcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHH-HHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHH
Confidence 4578899999999999999998874448999999 89998 78887873 33331 234555566776432 2
Q ss_pred ----CCCCccEEEeCCcccCcccchHHHHHHHHHHhhcC---C--CCceeeccccCCCCCCCCCCCCCceEeeeeccCCC
Q 030558 75 ----PNPDWDLILASDILLYVKQYSNLIKSLSVLLKSYK---P--KDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGK 145 (175)
Q Consensus 75 ----~~~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~---p--gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (175)
.+++||+|++++++|+.. +...+++.+.++|+ | ||++++..... .... .
T Consensus 156 ~~~~~~~~fD~Ii~~dvl~~~~---~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~------------------~~~~-~ 213 (281)
T 3bzb_A 156 QRCTGLQRFQVVLLADLLSFHQ---AHDALLRSVKMLLALPANDPTAVALVTFTHH------------------RPHL-A 213 (281)
T ss_dssp HHHHSCSSBSEEEEESCCSCGG---GHHHHHHHHHHHBCCTTTCTTCEEEEEECC-------------------------
T ss_pred HhhccCCCCCEEEEeCcccChH---HHHHHHHHHHHHhcccCCCCCCEEEEEEEee------------------eccc-c
Confidence 357899999999996654 45589999999999 9 99877641111 0010 0
Q ss_pred cchhHHHHHHHHcC-CeeEEe
Q 030558 146 EDETIFFTSCENAG-LEVKHL 165 (175)
Q Consensus 146 ~~~~~~~~~~~~~g-~~~~~~ 165 (175)
.....|++.+++.| |+++.+
T Consensus 214 ~~~~~~~~~l~~~G~f~v~~~ 234 (281)
T 3bzb_A 214 ERDLAFFRLVNADGALIAEPW 234 (281)
T ss_dssp --CTHHHHHHHHSTTEEEEEE
T ss_pred hhHHHHHHHHHhcCCEEEEEe
Confidence 11267888899999 988877
No 32
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.81 E-value=7.5e-20 Score=129.32 Aligned_cols=142 Identities=9% Similarity=0.061 Sum_probs=91.7
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCC-----------CCCCcceeeccCCCCCCCC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNG-----------ITPALPHIKHSWGDAFPIP 75 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~ 75 (175)
.++.+|||+|||+|..+..+++. +.+|+|+|+|+.|+ +.++++..... ...++..+..+.. .+++.
T Consensus 21 ~~~~~vLD~GCG~G~~~~~la~~-g~~V~gvD~S~~~l-~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~-~l~~~ 97 (203)
T 1pjz_A 21 VPGARVLVPLCGKSQDMSWLSGQ-GYHVVGAELSEAAV-ERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFF-ALTAR 97 (203)
T ss_dssp CTTCEEEETTTCCSHHHHHHHHH-CCEEEEEEECHHHH-HHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCS-SSTHH
T ss_pred CCCCEEEEeCCCCcHhHHHHHHC-CCeEEEEeCCHHHH-HHHHHHccCCcccccccccccccCCccEEEECccc-cCCcc
Confidence 46789999999999999999987 78999999999998 55554432200 0112233332222 23333
Q ss_pred C-CCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHH
Q 030558 76 N-PDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTS 154 (175)
Q Consensus 76 ~-~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (175)
+ ++||+|++..++++.. .++...++++++++|||||++++.+...... .. ..+. +. .+..++.++
T Consensus 98 ~~~~fD~v~~~~~l~~l~-~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~--~~--~~~~--------~~-~~~~el~~~ 163 (203)
T 1pjz_A 98 DIGHCAAFYDRAAMIALP-ADMRERYVQHLEALMPQACSGLLITLEYDQA--LL--EGPP--------FS-VPQTWLHRV 163 (203)
T ss_dssp HHHSEEEEEEESCGGGSC-HHHHHHHHHHHHHHSCSEEEEEEEEESSCSS--SS--SSCC--------CC-CCHHHHHHT
T ss_pred cCCCEEEEEECcchhhCC-HHHHHHHHHHHHHHcCCCcEEEEEEEecCcc--cc--CCCC--------CC-CCHHHHHHH
Confidence 3 6899999988875443 4566789999999999999855543222111 00 0000 10 124677777
Q ss_pred HHHcCCeeEEec
Q 030558 155 CENAGLEVKHLG 166 (175)
Q Consensus 155 ~~~~g~~~~~~~ 166 (175)
+++ ||+++.+.
T Consensus 164 ~~~-gf~i~~~~ 174 (203)
T 1pjz_A 164 MSG-NWEVTKVG 174 (203)
T ss_dssp SCS-SEEEEEEE
T ss_pred hcC-CcEEEEec
Confidence 777 88877653
No 33
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.80 E-value=2.7e-19 Score=133.77 Aligned_cols=157 Identities=11% Similarity=0.147 Sum_probs=107.4
Q ss_pred ccCCCcEEEeCCCccHHHHHHH--HhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEE
Q 030558 6 WIERRRCIELGSGTGALAIFLR--KAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLIL 83 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~--~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~ 83 (175)
..++.+|||||||+|..+..++ ...+.+|+++|+|+.++ +.++++....+...++..+..+..+ .++. ++||+|+
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~fD~v~ 192 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEAL-DGATRLAAGHALAGQITLHRQDAWK-LDTR-EGYDLLT 192 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHH-HHHHHHHTTSTTGGGEEEEECCGGG-CCCC-SCEEEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHH-HHHHHHHHhcCCCCceEEEECchhc-CCcc-CCeEEEE
Confidence 3567899999999999999984 33367899999999998 7777777766653334444444332 3444 8999999
Q ss_pred eCCcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCC--ce------------Eee-eeccCCCcch
Q 030558 84 ASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWP--AF------------LMS-WRRRIGKEDE 148 (175)
Q Consensus 84 ~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~--~~------------~~~-~~~~~~~~~~ 148 (175)
++.++++.++......+++++.++|+|||.+++............. .+. .+ ... ...+....+.
T Consensus 193 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~-~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (305)
T 3ocj_A 193 SNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDS-PWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTH 271 (305)
T ss_dssp CCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTC-CCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCH
T ss_pred ECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccc-cceeeccccchhhhhhhHHHHHHhhhhhccCCH
Confidence 9999977777776667999999999999999997544332221111 000 00 000 0001011245
Q ss_pred hHHHHHHHHcCCeeEEec
Q 030558 149 TIFFTSCENAGLEVKHLG 166 (175)
Q Consensus 149 ~~~~~~~~~~g~~~~~~~ 166 (175)
.++.++++++||++.++.
T Consensus 272 ~~~~~~l~~aGF~~v~~~ 289 (305)
T 3ocj_A 272 AQTRAQLEEAGFTDLRFE 289 (305)
T ss_dssp HHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHCCCEEEEEE
Confidence 899999999999987765
No 34
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.80 E-value=4.9e-20 Score=137.10 Aligned_cols=158 Identities=13% Similarity=0.156 Sum_probs=98.4
Q ss_pred ccccCCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCC------------------------
Q 030558 4 REWIERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGIT------------------------ 58 (175)
Q Consensus 4 ~~~~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~------------------------ 58 (175)
+...++++|||||||+|.++..+++.. +.+|+|+|+|+.++ +.++++.......
T Consensus 42 ~~~~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i-~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (292)
T 3g07_A 42 PEWFRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLI-HSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTV 120 (292)
T ss_dssp GGGTTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHH-HHHHHTC------------------------------
T ss_pred hhhcCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHHHHhhhhhhccccccccccccccccccccccc
Confidence 345678999999999999999999875 57899999999998 6666554433211
Q ss_pred ---------------------------------CCcceeeccCCCCC----CCCCCCccEEEeCCcccCcc---cchHHH
Q 030558 59 ---------------------------------PALPHIKHSWGDAF----PIPNPDWDLILASDILLYVK---QYSNLI 98 (175)
Q Consensus 59 ---------------------------------~~~~~~~~~~~~~~----~~~~~~fD~i~~~~~l~~~~---~~~~~~ 98 (175)
.++.....++.+.. ++.+++||+|++..++.+.. ..+.+.
T Consensus 121 ~~~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~ 200 (292)
T 3g07_A 121 RKRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLK 200 (292)
T ss_dssp ---------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHH
T ss_pred cccccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHH
Confidence 12233333332211 23567999999999984443 455788
Q ss_pred HHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHH--cCCeeEEe
Q 030558 99 KSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCEN--AGLEVKHL 165 (175)
Q Consensus 99 ~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~ 165 (175)
.++++++++|+|||.+++.......... ...........+..... .+.+|.+++.+ +||...++
T Consensus 201 ~~l~~~~~~LkpGG~lil~~~~~~~y~~-~~~~~~~~~~~~~~~~~--~p~~~~~~L~~~~~GF~~~~~ 266 (292)
T 3g07_A 201 RMFRRIYRHLRPGGILVLEPQPWSSYGK-RKTLTETIYKNYYRIQL--KPEQFSSYLTSPDVGFSSYEL 266 (292)
T ss_dssp HHHHHHHHHEEEEEEEEEECCCHHHHHT-TTTSCHHHHHHHHHCCC--CGGGHHHHHTSTTTCCCEEEE
T ss_pred HHHHHHHHHhCCCcEEEEecCCchhhhh-hhcccHHHHhhhhcEEE--cHHHHHHHHHhcCCCceEEEE
Confidence 9999999999999999886322110000 00000011111111111 14889999998 99965444
No 35
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.80 E-value=1.3e-19 Score=139.47 Aligned_cols=154 Identities=12% Similarity=0.097 Sum_probs=101.6
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhC--CCcEEEEeCChHHHHHHHHHHHhhC-----C-C-CCCcceeeccCCCC--C--
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAM--NLDITTSDYNDQEIEDNIAYNSTTN-----G-I-TPALPHIKHSWGDA--F-- 72 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~~~D~s~~~l~~~~~~~~~~~-----~-~-~~~~~~~~~~~~~~--~-- 72 (175)
..++.+|||||||+|..+..+++.. +.+|+++|+|+.++ +.++++.... + . ..++..+..+..+. .
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l-~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~ 159 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQL-EVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEP 159 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHH-HHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBS
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHH-HHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhccc
Confidence 5678999999999999999998874 56899999999998 6666555432 1 1 12334444444322 1
Q ss_pred -CCCCCCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCc-eEeeeeccCCCcchhH
Q 030558 73 -PIPNPDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPA-FLMSWRRRIGKEDETI 150 (175)
Q Consensus 73 -~~~~~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 150 (175)
++++++||+|+++.++++.. +...+++++.++|||||++++.................. +...... ..+..+
T Consensus 160 ~~~~~~~fD~V~~~~~l~~~~---d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 233 (383)
T 4fsd_A 160 EGVPDSSVDIVISNCVCNLST---NKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGG---ALYLED 233 (383)
T ss_dssp CCCCTTCEEEEEEESCGGGCS---CHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTT---CCBHHH
T ss_pred CCCCCCCEEEEEEccchhcCC---CHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhccccc---CCCHHH
Confidence 66778999999999995554 455999999999999999998743332111000000000 0000001 123488
Q ss_pred HHHHHHHcCCeeEEec
Q 030558 151 FFTSCENAGLEVKHLG 166 (175)
Q Consensus 151 ~~~~~~~~g~~~~~~~ 166 (175)
+.++++++||++.++.
T Consensus 234 ~~~ll~~aGF~~v~~~ 249 (383)
T 4fsd_A 234 FRRLVAEAGFRDVRLV 249 (383)
T ss_dssp HHHHHHHTTCCCEEEE
T ss_pred HHHHHHHCCCceEEEE
Confidence 9999999999866543
No 36
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.80 E-value=4.6e-19 Score=131.24 Aligned_cols=155 Identities=8% Similarity=0.049 Sum_probs=104.1
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeC
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILAS 85 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~ 85 (175)
..++.+|||||||+|.++..+++..+.+|+++|+|+.++ +.++++....+....+..+..+. .+++ ++||+|++.
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~-~~a~~~~~~~~~~~~~~~~~~d~---~~~~-~~fD~v~~~ 136 (287)
T 1kpg_A 62 LQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQA-NHVQQLVANSENLRSKRVLLAGW---EQFD-EPVDRIVSI 136 (287)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHH-HHHHHHHHTCCCCSCEEEEESCG---GGCC-CCCSEEEEE
T ss_pred CCCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHH-HHHHHHHHhcCCCCCeEEEECCh---hhCC-CCeeEEEEe
Confidence 456789999999999999999866688999999999998 77776766655533344433333 2333 889999999
Q ss_pred CcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCC----CCCC-----CCCceEeee-eccCCCcchhHHHHHH
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEG----TEGL-----PWPAFLMSW-RRRIGKEDETIFFTSC 155 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~----~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~~~ 155 (175)
.++.|.. .++...+++++.++|||||.+++.......... .... ....+...+ .......+..++.+++
T Consensus 137 ~~l~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l 215 (287)
T 1kpg_A 137 GAFEHFG-HERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSIPMVQECA 215 (287)
T ss_dssp SCGGGTC-TTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHH
T ss_pred CchhhcC-hHHHHHHHHHHHHhcCCCCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCCCCHHHHHHHH
Confidence 9995553 246679999999999999999997544322110 0000 000000000 0000112468899999
Q ss_pred HHcCCeeEEec
Q 030558 156 ENAGLEVKHLG 166 (175)
Q Consensus 156 ~~~g~~~~~~~ 166 (175)
+++||++.++.
T Consensus 216 ~~aGf~~~~~~ 226 (287)
T 1kpg_A 216 SANGFTVTRVQ 226 (287)
T ss_dssp HTTTCEEEEEE
T ss_pred HhCCcEEEEEE
Confidence 99999988764
No 37
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.80 E-value=2.9e-19 Score=128.58 Aligned_cols=154 Identities=12% Similarity=0.063 Sum_probs=100.1
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEe
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILA 84 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~ 84 (175)
..++.+|||+|||+|.++..+++.. +.+|+++|+|+.++ +.++++....+ ++..+..+.. ..++. ++||+|++
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~-~~a~~~~~~~~---~~~~~~~d~~-~~~~~-~~fD~v~~ 115 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKML-EIAKNRFRGNL---KVKYIEADYS-KYDFE-EKYDMVVS 115 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHH-HHHHHHTCSCT---TEEEEESCTT-TCCCC-SCEEEEEE
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHH-HHHHHhhccCC---CEEEEeCchh-ccCCC-CCceEEEE
Confidence 3467899999999999999998876 67899999999998 66665544322 2333333332 22333 79999999
Q ss_pred CCcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCC----------------CCCCCC-CCceEeeeeccCCCcc
Q 030558 85 SDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGE----------------GTEGLP-WPAFLMSWRRRIGKED 147 (175)
Q Consensus 85 ~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~----------------~~~~~~-~~~~~~~~~~~~~~~~ 147 (175)
..++++.. .+....+++++.++|+|||.+++......... ..+... ...+.... ......+
T Consensus 116 ~~~l~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 193 (234)
T 3dtn_A 116 ALSIHHLE-DEDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGYERS-KLDKDIE 193 (234)
T ss_dssp ESCGGGSC-HHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC-----CCCCCB
T ss_pred eCccccCC-HHHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhc-ccccccC
Confidence 99995553 44555799999999999999998743322111 000000 00000000 1111123
Q ss_pred hhHHHHHHHHcCCeeEEecc
Q 030558 148 ETIFFTSCENAGLEVKHLGS 167 (175)
Q Consensus 148 ~~~~~~~~~~~g~~~~~~~~ 167 (175)
..++.++++++||+..++.-
T Consensus 194 ~~~~~~ll~~aGF~~v~~~~ 213 (234)
T 3dtn_A 194 MNQQLNWLKEAGFRDVSCIY 213 (234)
T ss_dssp HHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHcCCCceeeee
Confidence 58899999999999887643
No 38
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.80 E-value=2.5e-19 Score=129.61 Aligned_cols=145 Identities=14% Similarity=0.100 Sum_probs=100.1
Q ss_pred CCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCCc
Q 030558 8 ERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASDI 87 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~~ 87 (175)
++.+|||||||+|.++..+++....+|+++|+|+.++ +.++++....+. ..+..+..+. ...++.+++||+|++..+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~-~~a~~~~~~~~~-~~~~~~~~d~-~~~~~~~~~fD~v~~~~~ 155 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFL-VQAKTYLGEEGK-RVRNYFCCGL-QDFTPEPDSYDVIWIQWV 155 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHH-HHHHHHTGGGGG-GEEEEEECCG-GGCCCCSSCEEEEEEESC
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHH-HHHHHHhhhcCC-ceEEEEEcCh-hhcCCCCCCEEEEEEcch
Confidence 5789999999999999998887666899999999998 666666544321 1122333332 234455668999999999
Q ss_pred ccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCeeEEec
Q 030558 88 LLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVKHLG 166 (175)
Q Consensus 88 l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 166 (175)
+++.. .+....+++++.++|+|||++++....... .. +.......+ ..+..++.++++++||++.+..
T Consensus 156 l~~~~-~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~--~~-------~~~~~~~~~-~~~~~~~~~~l~~aGf~~~~~~ 223 (241)
T 2ex4_A 156 IGHLT-DQHLAEFLRRCKGSLRPNGIIVIKDNMAQE--GV-------ILDDVDSSV-CRDLDVVRRIICSAGLSLLAEE 223 (241)
T ss_dssp GGGSC-HHHHHHHHHHHHHHEEEEEEEEEEEEEBSS--SE-------EEETTTTEE-EEBHHHHHHHHHHTTCCEEEEE
T ss_pred hhhCC-HHHHHHHHHHHHHhcCCCeEEEEEEccCCC--cc-------eecccCCcc-cCCHHHHHHHHHHcCCeEEEee
Confidence 85554 344669999999999999999997544322 00 000000000 1145889999999999987774
No 39
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.80 E-value=2.1e-19 Score=133.96 Aligned_cols=110 Identities=9% Similarity=0.112 Sum_probs=81.9
Q ss_pred CCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCC--CCcceeeccCCCCCCCCCCCccEEEeC
Q 030558 8 ERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGIT--PALPHIKHSWGDAFPIPNPDWDLILAS 85 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~fD~i~~~ 85 (175)
++.+|||||||+|.++..+++. +.+|+++|+|+.++ +.++++....+.. .++..+..+..+ +++ +++||+|++.
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~~-~~a~~~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~fD~v~~~ 157 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDL-GWEVTALELSTSVL-AAFRKRLAEAPADVRDRCTLVQGDMSA-FAL-DKRFGTVVIS 157 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTT-TCCEEEEESCHHHH-HHHHHHHHTSCHHHHTTEEEEECBTTB-CCC-SCCEEEEEEC
T ss_pred CCCcEEEEeccCCHHHHHHHHc-CCeEEEEECCHHHH-HHHHHHHhhcccccccceEEEeCchhc-CCc-CCCcCEEEEC
Confidence 3569999999999999999887 78999999999998 6776666554310 233444444432 333 6799999876
Q ss_pred CcccCcccchHHHHHHHHHHhhcCCCCceeeccccC
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKN 121 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~ 121 (175)
..+.++.+.++...+++++.++|+|||++++..+..
T Consensus 158 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 193 (299)
T 3g2m_A 158 SGSINELDEADRRGLYASVREHLEPGGKFLLSLAMS 193 (299)
T ss_dssp HHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred CcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecC
Confidence 444355555677899999999999999999985444
No 40
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.79 E-value=7e-19 Score=127.08 Aligned_cols=106 Identities=15% Similarity=0.144 Sum_probs=82.0
Q ss_pred CCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCC-
Q 030558 8 ERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASD- 86 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~- 86 (175)
++.+|||+|||+|.++..+++. +.+|+++|+|+.++ +.++++....+. .+..+..+.. ..++. ++||+|++..
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~s~~~~-~~a~~~~~~~~~--~~~~~~~d~~-~~~~~-~~fD~v~~~~~ 110 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK-FKNTWAVDLSQEML-SEAENKFRSQGL--KPRLACQDIS-NLNIN-RKFDLITCCLD 110 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG-SSEEEEECSCHHHH-HHHHHHHHHTTC--CCEEECCCGG-GCCCS-CCEEEEEECTT
T ss_pred CCCeEEEeCCCCCHHHHHHHHC-CCcEEEEECCHHHH-HHHHHHHhhcCC--CeEEEecccc-cCCcc-CCceEEEEcCc
Confidence 6789999999999999999887 78999999999998 666666655443 2233333322 22333 7899999998
Q ss_pred cccCcccchHHHHHHHHHHhhcCCCCceeeccc
Q 030558 87 ILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLT 119 (175)
Q Consensus 87 ~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~ 119 (175)
++.|....+++..+++++.++|+|||.+++.++
T Consensus 111 ~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 111 STNYIIDSDDLKKYFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp GGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred cccccCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 986665557788999999999999999998643
No 41
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.79 E-value=3.2e-19 Score=131.33 Aligned_cols=159 Identities=17% Similarity=0.198 Sum_probs=107.7
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEe
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILA 84 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~ 84 (175)
..++.+|||||||+|.++..+++.. +.+|+++|+|+.++ +.++.+....+. ..+..+..+.. .+++.+++||+|++
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~-~~a~~~~~~~~~-~~~~~~~~d~~-~~~~~~~~fD~v~~ 111 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESL-EKARENTEKNGI-KNVKFLQANIF-SLPFEDSSFDHIFV 111 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHH-HHHHHHHHHTTC-CSEEEEECCGG-GCCSCTTCEEEEEE
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHH-HHHHHHHHHcCC-CCcEEEEcccc-cCCCCCCCeeEEEE
Confidence 3568899999999999999998875 67899999999998 777777766555 22333333332 34566789999999
Q ss_pred CCcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCc---eEee---e--eccCCCcchhHHHHHHH
Q 030558 85 SDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPA---FLMS---W--RRRIGKEDETIFFTSCE 156 (175)
Q Consensus 85 ~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~---~~~~---~--~~~~~~~~~~~~~~~~~ 156 (175)
..++++..+ ...+++++.++|+|||.+++............ ..+. +... . ...........+.++++
T Consensus 112 ~~~l~~~~~---~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 186 (276)
T 3mgg_A 112 CFVLEHLQS---PEEALKSLKKVLKPGGTITVIEGDHGSCYFHP--EGKKAIEAWNCLIRVQAYMKGNSLVGRQIYPLLQ 186 (276)
T ss_dssp ESCGGGCSC---HHHHHHHHHHHEEEEEEEEEEEECGGGCEEES--CCHHHHHHHHHHHHHHHHTTCCTTGGGGHHHHHH
T ss_pred echhhhcCC---HHHHHHHHHHHcCCCcEEEEEEcCCCCceECC--CcHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHH
Confidence 999966554 44999999999999999998754331111000 0000 0000 0 00011123478899999
Q ss_pred HcCCeeEEecceEEEE
Q 030558 157 NAGLEVKHLGSRVYCI 172 (175)
Q Consensus 157 ~~g~~~~~~~~~~~~i 172 (175)
++||++.++.....++
T Consensus 187 ~aGf~~v~~~~~~~~~ 202 (276)
T 3mgg_A 187 ESGFEKIRVEPRMVYI 202 (276)
T ss_dssp HTTCEEEEEEEEEEEE
T ss_pred HCCCCeEEEeeEEEEC
Confidence 9999988887665544
No 42
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.79 E-value=4.6e-19 Score=131.54 Aligned_cols=110 Identities=15% Similarity=0.158 Sum_probs=81.5
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCC--CC---CCCCCccE
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDA--FP---IPNPDWDL 81 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~fD~ 81 (175)
.++.+|||||||+|.++..+++. +.+|+|+|+|+.++ +.++++............+.+..++. ++ +.+++||+
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l-~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~ 133 (293)
T 3thr_A 56 HGCHRVLDVACGTGVDSIMLVEE-GFSVTSVDASDKML-KYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDA 133 (293)
T ss_dssp TTCCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHH-HHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHC-CCeEEEEECCHHHH-HHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEE
Confidence 35789999999999999999887 77999999999998 66665543332211112222222222 22 46789999
Q ss_pred EEeC-CcccCccc----chHHHHHHHHHHhhcCCCCceeecc
Q 030558 82 ILAS-DILLYVKQ----YSNLIKSLSVLLKSYKPKDSQVGHL 118 (175)
Q Consensus 82 i~~~-~~l~~~~~----~~~~~~~l~~l~~~l~pgG~~~~~~ 118 (175)
|++. +++.|..+ .+++..++++++++|+|||.+++..
T Consensus 134 V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (293)
T 3thr_A 134 VICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDH 175 (293)
T ss_dssp EEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 9998 88866665 3557799999999999999999874
No 43
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.79 E-value=1.5e-18 Score=128.75 Aligned_cols=112 Identities=11% Similarity=0.074 Sum_probs=85.1
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCC-CCCCccEEEeC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPI-PNPDWDLILAS 85 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~fD~i~~~ 85 (175)
.++.+|||+|||+|.++..+++....+|+++|+|+.++ +.++++....+...++..+..+..+ .++ .+++||+|++.
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~~fD~v~~~ 140 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSI-NDARVRARNMKRRFKVFFRAQDSYG-RHMDLGKEFDVISSQ 140 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHH-HHHHHHHHTSCCSSEEEEEESCTTT-SCCCCSSCEEEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHH-HHHHHHHHhcCCCccEEEEECCccc-cccCCCCCcCEEEEC
Confidence 46789999999999999998887445899999999998 6777666655443233344333322 244 46799999999
Q ss_pred CcccCc-ccchHHHHHHHHHHhhcCCCCceeecccc
Q 030558 86 DILLYV-KQYSNLIKSLSVLLKSYKPKDSQVGHLTK 120 (175)
Q Consensus 86 ~~l~~~-~~~~~~~~~l~~l~~~l~pgG~~~~~~~~ 120 (175)
.++++. .+.++...+++++.++|+|||.+++..+.
T Consensus 141 ~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 141 FSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp SCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred chhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 988442 44667789999999999999999988544
No 44
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.78 E-value=7e-19 Score=128.55 Aligned_cols=149 Identities=17% Similarity=0.136 Sum_probs=98.0
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCC---------------------------
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITP--------------------------- 59 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~--------------------------- 59 (175)
.++++|||+|||+|.++..+++....+|+++|+|+.++ +.++++........
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNL-WELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHH-HHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHH-HHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 46789999999999999998776333899999999998 66655554322000
Q ss_pred -Cc-ceeeccCCCCCCCCC---CCccEEEeCCcccCcc-cchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCC
Q 030558 60 -AL-PHIKHSWGDAFPIPN---PDWDLILASDILLYVK-QYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWP 133 (175)
Q Consensus 60 -~~-~~~~~~~~~~~~~~~---~~fD~i~~~~~l~~~~-~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~ 133 (175)
.+ ..+..+..+..+..+ ++||+|++..++++.. ..+++..+++++.++|+|||.+++.......
T Consensus 134 ~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~---------- 203 (265)
T 2i62_A 134 RAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSS---------- 203 (265)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCC----------
T ss_pred hhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCc----------
Confidence 02 333344433333334 7999999999984222 3446779999999999999999987522110
Q ss_pred ceEeeeec-cCCCcchhHHHHHHHHcCCeeEEec
Q 030558 134 AFLMSWRR-RIGKEDETIFFTSCENAGLEVKHLG 166 (175)
Q Consensus 134 ~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~ 166 (175)
.+...... .....+.+.+.+.++++||++.++.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 237 (265)
T 2i62_A 204 YYMIGEQKFSSLPLGWETVRDAVEEAGYTIEQFE 237 (265)
T ss_dssp EEEETTEEEECCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred eEEcCCccccccccCHHHHHHHHHHCCCEEEEEE
Confidence 11100000 1111234789999999999987765
No 45
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.78 E-value=2e-19 Score=131.68 Aligned_cols=148 Identities=10% Similarity=0.012 Sum_probs=97.9
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASD 86 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~ 86 (175)
.++.+|||||||+|.++..+++. +.+|+|+|+|+.++ +.++.+. ++..+..+. ..+++++++||+|++..
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~-~~a~~~~-------~~~~~~~d~-~~~~~~~~~fD~v~~~~ 102 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALANQ-GLFVYAVEPSIVMR-QQAVVHP-------QVEWFTGYA-ENLALPDKSVDGVISIL 102 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHTT-TCEEEEECSCHHHH-HSSCCCT-------TEEEECCCT-TSCCSCTTCBSEEEEES
T ss_pred CCCCEEEEEcCcccHHHHHHHhC-CCEEEEEeCCHHHH-HHHHhcc-------CCEEEECch-hhCCCCCCCEeEEEEcc
Confidence 46789999999999999999885 78999999999987 4332211 223333333 33566778999999999
Q ss_pred cccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCC-CCCCceEeeeeccCCCcchhHHHHHHHHcCCeeEEe
Q 030558 87 ILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEG-LPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVKHL 165 (175)
Q Consensus 87 ~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 165 (175)
++++. +++..+++++.++|| ||.+++............. ...+.........+ .+...+. +++++||+..++
T Consensus 103 ~l~~~---~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~l~~aGF~~v~~ 175 (261)
T 3ege_A 103 AIHHF---SHLEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLYDYFPFLWEDALRFL--PLDEQIN-LLQENTKRRVEA 175 (261)
T ss_dssp CGGGC---SSHHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGGGTCHHHHHHHHTSC--CHHHHHH-HHHHHHCSEEEE
T ss_pred hHhhc---cCHHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHHHHHHHHhhhhhhhC--CCHHHHH-HHHHcCCCceeE
Confidence 99555 455599999999999 9988887554322221110 00111111111112 1346677 999999987777
Q ss_pred cceEEE
Q 030558 166 GSRVYC 171 (175)
Q Consensus 166 ~~~~~~ 171 (175)
....++
T Consensus 176 ~~~~~p 181 (261)
T 3ege_A 176 IPFLLP 181 (261)
T ss_dssp EECCEE
T ss_pred EEecCC
Confidence 554444
No 46
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.78 E-value=2.3e-19 Score=123.05 Aligned_cols=139 Identities=13% Similarity=0.109 Sum_probs=97.5
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeC
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILAS 85 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~ 85 (175)
..++.+|||+|||+|.++..+++.. .+|+++|+++.++ +.++++ . +.+.+..++ .++.+++||+|++.
T Consensus 15 ~~~~~~vLDiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~-~~a~~~-----~----~~v~~~~~d-~~~~~~~~D~v~~~ 82 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNGFYCKYLLEFA-TKLYCIDINVIAL-KEVKEK-----F----DSVITLSDP-KEIPDNSVDFILFA 82 (170)
T ss_dssp SSCCEEEEEETCTTCTTHHHHHTTE-EEEEEECSCHHHH-HHHHHH-----C----TTSEEESSG-GGSCTTCEEEEEEE
T ss_pred cCCCCeEEEECCCCCHHHHHHHhhc-CeEEEEeCCHHHH-HHHHHh-----C----CCcEEEeCC-CCCCCCceEEEEEc
Confidence 3467899999999999999998875 4999999999998 555544 1 123333334 66677899999999
Q ss_pred CcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCeeEEe
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVKHL 165 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 165 (175)
.++++.. +...+++++.++|+|||++++............ .....+ +..++.++++ ||++.+.
T Consensus 83 ~~l~~~~---~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~---------~~~~~~---~~~~~~~~l~--Gf~~~~~ 145 (170)
T 3i9f_A 83 NSFHDMD---DKQHVISEVKRILKDDGRVIIIDWRKENTGIGP---------PLSIRM---DEKDYMGWFS--NFVVEKR 145 (170)
T ss_dssp SCSTTCS---CHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSS---------CGGGCC---CHHHHHHHTT--TEEEEEE
T ss_pred cchhccc---CHHHHHHHHHHhcCCCCEEEEEEcCccccccCc---------hHhhhc---CHHHHHHHHh--CcEEEEc
Confidence 9996664 455999999999999999999754432221110 011122 3477888887 9987665
Q ss_pred ---cceEEEEe
Q 030558 166 ---GSRVYCIK 173 (175)
Q Consensus 166 ---~~~~~~i~ 173 (175)
....|.+.
T Consensus 146 ~~~~~~~~~l~ 156 (170)
T 3i9f_A 146 FNPTPYHFGLV 156 (170)
T ss_dssp ECSSTTEEEEE
T ss_pred cCCCCceEEEE
Confidence 33445543
No 47
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.78 E-value=3.1e-18 Score=124.81 Aligned_cols=142 Identities=8% Similarity=0.029 Sum_probs=91.8
Q ss_pred CCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhh----------CCCC---CCcceeeccCCCCCC-
Q 030558 8 ERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTT----------NGIT---PALPHIKHSWGDAFP- 73 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~----------~~~~---~~~~~~~~~~~~~~~- 73 (175)
++.+|||+|||+|..+..|++. |.+|+|+|+|+.|+ +.+++.... ++.. .....+.+..++...
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~-G~~V~gvD~S~~~i-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADR-GHTVVGVEISEIGI-REFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHT-TCEEEEECSCHHHH-HHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCCeEEEeCCCCcHHHHHHHHC-CCeEEEEECCHHHH-HHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 6789999999999999999887 88999999999998 554433211 0000 001223343444332
Q ss_pred -CC-CCCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHH
Q 030558 74 -IP-NPDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIF 151 (175)
Q Consensus 74 -~~-~~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (175)
.. .++||+|++..++.+.+ .++...+++++.++|||||++++.+....... . ..+. +. .+..++
T Consensus 146 ~~~~~~~FD~V~~~~~l~~l~-~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~--~--~g~~--------~~-~~~~el 211 (252)
T 2gb4_A 146 PRANIGKFDRIWDRGALVAIN-PGDHDRYADIILSLLRKEFQYLVAVLSYDPTK--H--AGPP--------FY-VPSAEL 211 (252)
T ss_dssp GGGCCCCEEEEEESSSTTTSC-GGGHHHHHHHHHHTEEEEEEEEEEEEECCTTS--C--CCSS--------CC-CCHHHH
T ss_pred CcccCCCEEEEEEhhhhhhCC-HHHHHHHHHHHHHHcCCCeEEEEEEEecCCcc--C--CCCC--------CC-CCHHHH
Confidence 33 27999999988875553 55677899999999999999875533221110 0 0111 11 124777
Q ss_pred HHHHHHcCCeeEEec
Q 030558 152 FTSCENAGLEVKHLG 166 (175)
Q Consensus 152 ~~~~~~~g~~~~~~~ 166 (175)
.+++.. +|+++.+.
T Consensus 212 ~~~l~~-~f~v~~~~ 225 (252)
T 2gb4_A 212 KRLFGT-KCSMQCLE 225 (252)
T ss_dssp HHHHTT-TEEEEEEE
T ss_pred HHHhhC-CeEEEEEe
Confidence 787776 58876653
No 48
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.78 E-value=1.3e-18 Score=129.98 Aligned_cols=112 Identities=10% Similarity=-0.015 Sum_probs=76.7
Q ss_pred CCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCC-----CcceeeccC-CCC------CCCC
Q 030558 8 ERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITP-----ALPHIKHSW-GDA------FPIP 75 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~-----~~~~~~~~~-~~~------~~~~ 75 (175)
++.+|||||||+|..+..++...+.+|+|+|+|+.|+ +.++......+... .+.....+. ++. .+++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l-~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAI-ARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHH-HHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHH-HHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 4789999999999877666665567899999999999 55554443322210 011111111 111 1245
Q ss_pred CCCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeecccc
Q 030558 76 NPDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTK 120 (175)
Q Consensus 76 ~~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~ 120 (175)
+++||+|++..++++..+.++...++++++++|||||.++++++.
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 679999999988855444445679999999999999999988543
No 49
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.78 E-value=1.7e-18 Score=130.04 Aligned_cols=155 Identities=8% Similarity=0.010 Sum_probs=104.0
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeC
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILAS 85 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~ 85 (175)
..++.+|||+|||+|.++..+++..+.+|+++|+|+.++ +.++++....+....+..+..+. ... +++||+|++.
T Consensus 88 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~-~~a~~~~~~~~~~~~v~~~~~d~---~~~-~~~fD~v~~~ 162 (318)
T 2fk8_A 88 LKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQH-ARCEQVLASIDTNRSRQVLLQGW---EDF-AEPVDRIVSI 162 (318)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHH-HHHHHHHHTSCCSSCEEEEESCG---GGC-CCCCSEEEEE
T ss_pred CCCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHhcCCCCceEEEECCh---HHC-CCCcCEEEEe
Confidence 456889999999999999999887678999999999998 77777766655533334433332 222 2789999999
Q ss_pred CcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCC---------ceEeee-eccCCCcchhHHHHHH
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWP---------AFLMSW-RRRIGKEDETIFFTSC 155 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~---------~~~~~~-~~~~~~~~~~~~~~~~ 155 (175)
.++.+.. .++...+++++.++|+|||++++................+ .+...+ .......+..++.+++
T Consensus 163 ~~l~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l 241 (318)
T 2fk8_A 163 EAFEHFG-HENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPSTEMMVEHG 241 (318)
T ss_dssp SCGGGTC-GGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHH
T ss_pred ChHHhcC-HHHHHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCCCHHHHHHHH
Confidence 9985553 3567799999999999999999975443221100000000 000000 0001112468899999
Q ss_pred HHcCCeeEEec
Q 030558 156 ENAGLEVKHLG 166 (175)
Q Consensus 156 ~~~g~~~~~~~ 166 (175)
+++||++.++.
T Consensus 242 ~~aGf~~~~~~ 252 (318)
T 2fk8_A 242 EKAGFTVPEPL 252 (318)
T ss_dssp HHTTCBCCCCE
T ss_pred HhCCCEEEEEE
Confidence 99999977654
No 50
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.78 E-value=4.8e-18 Score=122.30 Aligned_cols=105 Identities=12% Similarity=0.123 Sum_probs=79.0
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEe-C
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILA-S 85 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~-~ 85 (175)
.++.+|||+|||+|.++..+++. +.+|+++|+|+.++ +.++++.. .+..+..+..+ .+. +++||+|++ .
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~s~~~~-~~a~~~~~------~~~~~~~d~~~-~~~-~~~~D~v~~~~ 108 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKE-FGDTAGLELSEDML-THARKRLP------DATLHQGDMRD-FRL-GRKFSAVVSMF 108 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHH-HSEEEEEESCHHHH-HHHHHHCT------TCEEEECCTTT-CCC-SSCEEEEEECT
T ss_pred CCCCeEEEecccCCHHHHHHHHh-CCcEEEEeCCHHHH-HHHHHhCC------CCEEEECCHHH-ccc-CCCCcEEEEcC
Confidence 35789999999999999999887 55999999999998 55554421 22333333322 233 578999995 5
Q ss_pred CcccCcccchHHHHHHHHHHhhcCCCCceeeccccC
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKN 121 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~ 121 (175)
+++.+..+.+++..+++++.++|+|||.+++.....
T Consensus 109 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 109 SSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp TGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred chHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccC
Confidence 587666656778899999999999999999975443
No 51
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.77 E-value=4.9e-18 Score=121.39 Aligned_cols=107 Identities=13% Similarity=0.235 Sum_probs=81.7
Q ss_pred CCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCCc
Q 030558 8 ERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASDI 87 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~~ 87 (175)
++.+|||+|||+|.++..+++. +.+|+++|+|+.++ +.++++....+. .+..+..+.. ..++.+++||+|+++.+
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~~~-~~~v~~vD~s~~~~-~~a~~~~~~~~~--~~~~~~~d~~-~~~~~~~~~D~v~~~~~ 112 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLEDY-GFEVVGVDISEDMI-RKAREYAKSRES--NVEFIVGDAR-KLSFEDKTFDYVIFIDS 112 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHH-HHHHHHHHHTTC--CCEEEECCTT-SCCSCTTCEEEEEEESC
T ss_pred CCCeEEEEeccCCHHHHHHHHc-CCEEEEEECCHHHH-HHHHHHHHhcCC--CceEEECchh-cCCCCCCcEEEEEEcCc
Confidence 4789999999999999999887 56999999999998 677666655442 3344444332 23455679999999998
Q ss_pred ccCcccchHHHHHHHHHHhhcCCCCceeecccc
Q 030558 88 LLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTK 120 (175)
Q Consensus 88 l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~ 120 (175)
+ +....++...+++++.++|+|||.+++..+.
T Consensus 113 ~-~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 113 I-VHFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp G-GGCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred h-HhCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 4 2344556779999999999999999888443
No 52
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.77 E-value=6.3e-20 Score=132.58 Aligned_cols=108 Identities=16% Similarity=0.098 Sum_probs=78.3
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCC-CCCCCCCccEEEeC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDA-FPIPNPDWDLILAS 85 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~fD~i~~~ 85 (175)
.+|++|||||||+|..+..+++....+|+++|+|+.++ +.++++....+. .+..+..++.+. .++.+++||.|+.-
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~-~~a~~~~~~~~~--~~~~~~~~a~~~~~~~~~~~FD~i~~D 135 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVF-QRLRDWAPRQTH--KVIPLKGLWEDVAPTLPDGHFDGILYD 135 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHH-HHHHHHGGGCSS--EEEEEESCHHHHGGGSCTTCEEEEEEC
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHH-HHHHHHHhhCCC--ceEEEeehHHhhcccccccCCceEEEe
Confidence 46889999999999999999887567899999999998 777766665444 222333333222 24567899999753
Q ss_pred Cc--ccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 86 DI--LLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 86 ~~--l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
.+ .+...+..+...+++++.|+|||||+|.+.
T Consensus 136 ~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 136 TYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp CCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred eeecccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 22 122344556779999999999999988875
No 53
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.77 E-value=1e-18 Score=128.95 Aligned_cols=151 Identities=14% Similarity=0.098 Sum_probs=98.7
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASD 86 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~ 86 (175)
.++.+|||+|||+|.++..+++ .+.+|+|+|+|+.|+ +.++++. ..+..+..+.. .+++ +++||+|++..
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~-~~a~~~~------~~~~~~~~d~~-~~~~-~~~fD~v~~~~ 125 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQ-SGAEVLGTDNAATMI-EKARQNY------PHLHFDVADAR-NFRV-DKPLDAVFSNA 125 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHH-TTCEEEEEESCHHHH-HHHHHHC------TTSCEEECCTT-TCCC-SSCEEEEEEES
T ss_pred CCCCEEEEecCCCCHHHHHHHh-CCCeEEEEECCHHHH-HHHHhhC------CCCEEEECChh-hCCc-CCCcCEEEEcc
Confidence 4678999999999999999988 478999999999998 5555443 12234443333 2344 57999999999
Q ss_pred cccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCC---CCC---CCCCCceEeeeeccCCCcchhHHHHHHHHcCC
Q 030558 87 ILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGE---GTE---GLPWPAFLMSWRRRIGKEDETIFFTSCENAGL 160 (175)
Q Consensus 87 ~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 160 (175)
++++.. ++..+++++.++|+|||++++..+...... ..+ ..............+...+...+.++++++||
T Consensus 126 ~l~~~~---d~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 202 (279)
T 3ccf_A 126 MLHWVK---EPEAAIASIHQALKSGGRFVAEFGGKGNIKYILEALYNALETLGIHNPQALNPWYFPSIGEYVNILEKQGF 202 (279)
T ss_dssp CGGGCS---CHHHHHHHHHHHEEEEEEEEEEEECTTTTHHHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHHHHHHHTE
T ss_pred hhhhCc---CHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHhcCCccccCcCceeCCCHHHHHHHHHHcCC
Confidence 995554 445999999999999999998755432110 000 00000000000000111245889999999999
Q ss_pred eeEEecceEE
Q 030558 161 EVKHLGSRVY 170 (175)
Q Consensus 161 ~~~~~~~~~~ 170 (175)
++..+....+
T Consensus 203 ~~~~~~~~~~ 212 (279)
T 3ccf_A 203 DVTYAALFNR 212 (279)
T ss_dssp EEEEEEEEEC
T ss_pred EEEEEEEecc
Confidence 9877654433
No 54
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.77 E-value=6.2e-18 Score=121.33 Aligned_cols=133 Identities=16% Similarity=0.179 Sum_probs=97.9
Q ss_pred cCCCcEEEeCCC-ccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeC
Q 030558 7 IERRRCIELGSG-TGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILAS 85 (175)
Q Consensus 7 ~~~~~vLDlGcG-~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~ 85 (175)
.++.+|||+||| +|.++..+++..+.+|+++|+|+.++ +.++++...++. ++..+..+.....++.+++||+|+++
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~-~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~~fD~I~~n 130 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFF-EYARRNIERNNS--NVRLVKSNGGIIKGVVEGTFDVIFSA 130 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHH-HHHHHHHHHTTC--CCEEEECSSCSSTTTCCSCEEEEEEC
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHH-HHHHHHHHHhCC--CcEEEeCCchhhhhcccCceeEEEEC
Confidence 467899999999 99999999887678999999999998 888888887766 44555544433334556899999998
Q ss_pred CcccCccc----------------chHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchh
Q 030558 86 DILLYVKQ----------------YSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDET 149 (175)
Q Consensus 86 ~~l~~~~~----------------~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (175)
..++.... ......+++++.++|+|||++++..+.. .....
T Consensus 131 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-----------------------~~~~~ 187 (230)
T 3evz_A 131 PPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDK-----------------------EKLLN 187 (230)
T ss_dssp CCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESC-----------------------HHHHH
T ss_pred CCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEeccc-----------------------HhHHH
Confidence 77532221 1223689999999999999888842210 01247
Q ss_pred HHHHHHHHcCCeeEEe
Q 030558 150 IFFTSCENAGLEVKHL 165 (175)
Q Consensus 150 ~~~~~~~~~g~~~~~~ 165 (175)
.+.+.+++.||+++.+
T Consensus 188 ~~~~~l~~~g~~~~~~ 203 (230)
T 3evz_A 188 VIKERGIKLGYSVKDI 203 (230)
T ss_dssp HHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHcCCceEEE
Confidence 7888999999987765
No 55
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.77 E-value=7.1e-18 Score=121.72 Aligned_cols=104 Identities=12% Similarity=0.196 Sum_probs=79.8
Q ss_pred CCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCC-
Q 030558 8 ERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASD- 86 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~- 86 (175)
++.+|||+|||+|.++..+++. .+|+++|+|+.++ +.++++....+. .+..+..+..+ .+. .++||+|++..
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~-~~a~~~~~~~~~--~~~~~~~d~~~-~~~-~~~fD~v~~~~~ 105 (243)
T 3d2l_A 33 PGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEML-EIAQEKAMETNR--HVDFWVQDMRE-LEL-PEPVDAITILCD 105 (243)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHH-HHHHHHHHHTTC--CCEEEECCGGG-CCC-SSCEEEEEECTT
T ss_pred CCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHH-HHHHHhhhhcCC--ceEEEEcChhh-cCC-CCCcCEEEEeCC
Confidence 5689999999999999999776 7899999999998 666666655432 23333333322 233 37899999975
Q ss_pred cccCcccchHHHHHHHHHHhhcCCCCceeecc
Q 030558 87 ILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHL 118 (175)
Q Consensus 87 ~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~ 118 (175)
++.+..+.++...+++++.++|+|||.+++.+
T Consensus 106 ~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 137 (243)
T 3d2l_A 106 SLNYLQTEADVKQTFDSAARLLTDGGKLLFDV 137 (243)
T ss_dssp GGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred chhhcCCHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 88666566778899999999999999998864
No 56
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.76 E-value=2.8e-18 Score=121.11 Aligned_cols=124 Identities=16% Similarity=0.178 Sum_probs=94.2
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASD 86 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~ 86 (175)
.++.+|||+|||+|.++..+++....+|+++|+|+.++ +.++++....+... +.+..++..+..+++||+|+++.
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~-~~a~~~~~~~~~~~----v~~~~~d~~~~~~~~fD~i~~~~ 133 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESM-TAAEENAALNGIYD----IALQKTSLLADVDGKFDLIVANI 133 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHH-HHHHHHHHHTTCCC----CEEEESSTTTTCCSCEEEEEEES
T ss_pred cCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHH-HHHHHHHHHcCCCc----eEEEeccccccCCCCceEEEECC
Confidence 36789999999999999999886455899999999998 77777877766622 33334444445568999999987
Q ss_pred cccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCeeEEe
Q 030558 87 ILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVKHL 165 (175)
Q Consensus 87 ~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 165 (175)
++ . .+..+++++.++|+|||.+++..... .....+.+.++++||++..+
T Consensus 134 ~~---~---~~~~~l~~~~~~L~~gG~l~~~~~~~------------------------~~~~~~~~~~~~~Gf~~~~~ 182 (205)
T 3grz_A 134 LA---E---ILLDLIPQLDSHLNEDGQVIFSGIDY------------------------LQLPKIEQALAENSFQIDLK 182 (205)
T ss_dssp CH---H---HHHHHGGGSGGGEEEEEEEEEEEEEG------------------------GGHHHHHHHHHHTTEEEEEE
T ss_pred cH---H---HHHHHHHHHHHhcCCCCEEEEEecCc------------------------ccHHHHHHHHHHcCCceEEe
Confidence 65 2 24589999999999999888741111 12477889999999987665
No 57
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.76 E-value=3.5e-19 Score=130.14 Aligned_cols=97 Identities=13% Similarity=0.188 Sum_probs=75.1
Q ss_pred CCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCCc
Q 030558 8 ERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASDI 87 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~~ 87 (175)
.+.+|||||||+|..+..+++. +.+|+|+|+|+.|+ +.+++. .++..+..+ .+.+++++++||+|++..+
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~-~~~v~gvD~s~~ml-~~a~~~-------~~v~~~~~~-~e~~~~~~~sfD~v~~~~~ 108 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEF-FERVHAVDPGEAQI-RQALRH-------PRVTYAVAP-AEDTGLPPASVDVAIAAQA 108 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTT-CSEEEEEESCHHHH-HTCCCC-------TTEEEEECC-TTCCCCCSSCEEEEEECSC
T ss_pred CCCCEEEEcCCCCHHHHHHHHh-CCEEEEEeCcHHhh-hhhhhc-------CCceeehhh-hhhhcccCCcccEEEEeee
Confidence 4578999999999999999887 78999999999998 433211 122222222 3456788899999999999
Q ss_pred ccCcccchHHHHHHHHHHhhcCCCCceeecc
Q 030558 88 LLYVKQYSNLIKSLSVLLKSYKPKDSQVGHL 118 (175)
Q Consensus 88 l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~ 118 (175)
+ |+.+.+ ++++++.|+|||||++++..
T Consensus 109 ~-h~~~~~---~~~~e~~rvLkpgG~l~~~~ 135 (257)
T 4hg2_A 109 M-HWFDLD---RFWAELRRVARPGAVFAAVT 135 (257)
T ss_dssp C-TTCCHH---HHHHHHHHHEEEEEEEEEEE
T ss_pred h-hHhhHH---HHHHHHHHHcCCCCEEEEEE
Confidence 8 665444 89999999999999998873
No 58
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.76 E-value=2.4e-18 Score=124.19 Aligned_cols=103 Identities=15% Similarity=0.253 Sum_probs=78.4
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCC-cEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNL-DITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILAS 85 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~-~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~ 85 (175)
.++.+|||+|||+|.++..+++. +. +|+++|+|+.++ +.++++.... .+..+..+.. ..++.+++||+|++.
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~-~~a~~~~~~~----~~~~~~~d~~-~~~~~~~~fD~v~~~ 114 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEH-GASYVLGLDLSEKML-ARARAAGPDT----GITYERADLD-KLHLPQDSFDLAYSS 114 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHH-HHHHHTSCSS----SEEEEECCGG-GCCCCTTCEEEEEEE
T ss_pred cCCCEEEEEcCcCCHHHHHHHHC-CCCeEEEEcCCHHHH-HHHHHhcccC----CceEEEcChh-hccCCCCCceEEEEe
Confidence 46789999999999999999887 55 899999999998 5655443321 2233333332 234567799999999
Q ss_pred CcccCcccchHHHHHHHHHHhhcCCCCceeeccc
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLT 119 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~ 119 (175)
.++++.. +...+++++.++|+|||++++...
T Consensus 115 ~~l~~~~---~~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 115 LALHYVE---DVARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp SCGGGCS---CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccccccc---hHHHHHHHHHHhcCcCcEEEEEeC
Confidence 9985554 456999999999999999998753
No 59
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.76 E-value=1.4e-18 Score=120.82 Aligned_cols=111 Identities=10% Similarity=0.042 Sum_probs=79.9
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeC
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILAS 85 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~ 85 (175)
..++.+|||+|||+|.++..+++. +.+|+|+|+|+.++ +.++++....+. .++..+..+..+..++.+++||+|+++
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l-~~a~~~~~~~~~-~~v~~~~~~~~~l~~~~~~~fD~v~~~ 96 (185)
T 3mti_A 20 LDDESIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQAL-GKTSQRLSDLGI-ENTELILDGHENLDHYVREPIRAAIFN 96 (185)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHH-HHHHHHHHHHTC-CCEEEEESCGGGGGGTCCSCEEEEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHH-HHHHHHHHHcCC-CcEEEEeCcHHHHHhhccCCcCEEEEe
Confidence 346889999999999999999988 88999999999998 777777776655 334444422222112446789999887
Q ss_pred CcccCc------ccchHHHHHHHHHHhhcCCCCceeeccc
Q 030558 86 DILLYV------KQYSNLIKSLSVLLKSYKPKDSQVGHLT 119 (175)
Q Consensus 86 ~~l~~~------~~~~~~~~~l~~l~~~l~pgG~~~~~~~ 119 (175)
...... ........+++++.++|||||++++..+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 136 (185)
T 3mti_A 97 LGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY 136 (185)
T ss_dssp EC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence 322111 0234566889999999999999988643
No 60
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.76 E-value=6.9e-18 Score=122.96 Aligned_cols=148 Identities=19% Similarity=0.215 Sum_probs=96.9
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEe
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILA 84 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~ 84 (175)
..++.+|||+|||+|.++..+++.. +.+|+++|+|+.++ +.++++. ..+..+..+..+ .+ .+++||+|++
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~-~~a~~~~------~~~~~~~~d~~~-~~-~~~~fD~v~~ 101 (259)
T 2p35_A 31 LERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDML-EKAADRL------PNTNFGKADLAT-WK-PAQKADLLYA 101 (259)
T ss_dssp CSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHH-HHHHHHS------TTSEEEECCTTT-CC-CSSCEEEEEE
T ss_pred CCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHH-HHHHHhC------CCcEEEECChhh-cC-ccCCcCEEEE
Confidence 3467899999999999999998865 67899999999998 5555441 123344333322 33 5679999999
Q ss_pred CCcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCC-----CCCC--CCCCceEeee-eccCCCcchhHHHHHHH
Q 030558 85 SDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGE-----GTEG--LPWPAFLMSW-RRRIGKEDETIFFTSCE 156 (175)
Q Consensus 85 ~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~-----~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 156 (175)
+.++++.. +...+++++.++|+|||.+++..+...... .... ..+....... .......+...+.++++
T Consensus 102 ~~~l~~~~---~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 178 (259)
T 2p35_A 102 NAVFQWVP---DHLAVLSQLMDQLESGGVLAVQMPDNLQEPTHIAMHETADGGPWKDAFSGGGLRRKPLPPPSDYFNALS 178 (259)
T ss_dssp ESCGGGST---THHHHHHHHGGGEEEEEEEEEEEECCTTSHHHHHHHHHHHHSTTGGGC-------CCCCCHHHHHHHHG
T ss_pred eCchhhCC---CHHHHHHHHHHhcCCCeEEEEEeCCCCCcHHHHHHHHHhcCcchHHHhccccccccCCCCHHHHHHHHH
Confidence 99995553 456999999999999999999865432110 0000 0011100000 00111224588999999
Q ss_pred HcCCeeEEe
Q 030558 157 NAGLEVKHL 165 (175)
Q Consensus 157 ~~g~~~~~~ 165 (175)
++||++...
T Consensus 179 ~aGf~v~~~ 187 (259)
T 2p35_A 179 PKSSRVDVW 187 (259)
T ss_dssp GGEEEEEEE
T ss_pred hcCCceEEE
Confidence 999986544
No 61
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.76 E-value=1.2e-17 Score=116.91 Aligned_cols=143 Identities=14% Similarity=0.241 Sum_probs=97.1
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeC
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILAS 85 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~ 85 (175)
..++.+|||+|||+|.++..+++. +.+|+++|+|+.++ +.++++....+. ..+..+..+..+ .++ +++||+|++.
T Consensus 30 ~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~-~~a~~~~~~~~~-~~~~~~~~d~~~-~~~-~~~~D~v~~~ 104 (199)
T 2xvm_A 30 VVKPGKTLDLGCGNGRNSLYLAAN-GYDVDAWDKNAMSI-ANVERIKSIENL-DNLHTRVVDLNN-LTF-DRQYDFILST 104 (199)
T ss_dssp TSCSCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHH-HHHHHHHHHHTC-TTEEEEECCGGG-CCC-CCCEEEEEEE
T ss_pred ccCCCeEEEEcCCCCHHHHHHHHC-CCeEEEEECCHHHH-HHHHHHHHhCCC-CCcEEEEcchhh-CCC-CCCceEEEEc
Confidence 346789999999999999999887 78999999999998 666666655444 123333333322 334 6799999999
Q ss_pred CcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCeeEEe
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVKHL 165 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 165 (175)
.++++.. .++...+++++.++|+|||.+++........... . ..+...+ +..++.+++++ |++.+.
T Consensus 105 ~~l~~~~-~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~---~-----~~~~~~~---~~~~l~~~~~~--f~~~~~ 170 (199)
T 2xvm_A 105 VVLMFLE-AKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPC---T-----VGFPFAF---KEGELRRYYEG--WERVKY 170 (199)
T ss_dssp SCGGGSC-GGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCC---C-----SCCSCCB---CTTHHHHHTTT--SEEEEE
T ss_pred chhhhCC-HHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCC---C-----CCCCCcc---CHHHHHHHhcC--CeEEEe
Confidence 9985543 4567799999999999999987764332211100 0 0011122 23677777765 887776
Q ss_pred cc
Q 030558 166 GS 167 (175)
Q Consensus 166 ~~ 167 (175)
.+
T Consensus 171 ~~ 172 (199)
T 2xvm_A 171 NE 172 (199)
T ss_dssp EC
T ss_pred cc
Confidence 44
No 62
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.76 E-value=8.1e-18 Score=122.77 Aligned_cols=159 Identities=16% Similarity=0.177 Sum_probs=101.5
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeC
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILAS 85 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~ 85 (175)
..++.+|||+|||+|.++..+++. +.+|+++|+|+.++ +.++++. .... ..+..+..+. ..+++.+++||+|++.
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~-~~a~~~~-~~~~-~~~~~~~~d~-~~~~~~~~~fD~v~~~ 111 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLIAR-GYRYIALDADAAML-EVFRQKI-AGVD-RKVQVVQADA-RAIPLPDESVHGVIVV 111 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHHTT-TCEEEEEESCHHHH-HHHHHHT-TTSC-TTEEEEESCT-TSCCSCTTCEEEEEEE
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHC-CCEEEEEECCHHHH-HHHHHHh-hccC-CceEEEEccc-ccCCCCCCCeeEEEEC
Confidence 346789999999999999999887 78999999999998 6666554 2111 2334443333 2345667899999999
Q ss_pred CcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCC-CCCCCCCCceEee--e--eccCCCcchhHHHHHHHHcCC
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGE-GTEGLPWPAFLMS--W--RRRIGKEDETIFFTSCENAGL 160 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~-~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~g~ 160 (175)
.++++.. +...+++++.++|+|||.+++......... ............. + .......+...+.++++++||
T Consensus 112 ~~l~~~~---~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf 188 (263)
T 2yqz_A 112 HLWHLVP---DWPKVLAEAIRVLKPGGALLEGWDQAEASPEWTLQERWRAFAAEEGFPVERGLHAKRLKEVEEALRRLGL 188 (263)
T ss_dssp SCGGGCT---THHHHHHHHHHHEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHTTC
T ss_pred CchhhcC---CHHHHHHHHHHHCCCCcEEEEEecCCCccHHHHHHHHHHHHHHHhCCCcccccccCCHHHHHHHHHHcCC
Confidence 9985544 455999999999999999988721110000 0000000000000 0 000011234778899999999
Q ss_pred eeEEecceEEEE
Q 030558 161 EVKHLGSRVYCI 172 (175)
Q Consensus 161 ~~~~~~~~~~~i 172 (175)
++.......|..
T Consensus 189 ~~~~~~~~~~~~ 200 (263)
T 2yqz_A 189 KPRTREVARWRE 200 (263)
T ss_dssp CCEEEEEEEEEE
T ss_pred CcceEEEeeeec
Confidence 987765555543
No 63
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.75 E-value=2.3e-17 Score=122.10 Aligned_cols=106 Identities=13% Similarity=0.261 Sum_probs=83.5
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASD 86 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~ 86 (175)
.++.+|||+|||+|.++..+++. +.+|+++|+|+.++ +.++++...++. .+..+..+..+ .+. +++||+|+++.
T Consensus 119 ~~~~~vLD~GcG~G~~~~~l~~~-g~~v~~vD~s~~~~-~~a~~~~~~~~~--~~~~~~~d~~~-~~~-~~~fD~i~~~~ 192 (286)
T 3m70_A 119 ISPCKVLDLGCGQGRNSLYLSLL-GYDVTSWDHNENSI-AFLNETKEKENL--NISTALYDINA-ANI-QENYDFIVSTV 192 (286)
T ss_dssp SCSCEEEEESCTTCHHHHHHHHT-TCEEEEEESCHHHH-HHHHHHHHHTTC--CEEEEECCGGG-CCC-CSCEEEEEECS
T ss_pred cCCCcEEEECCCCCHHHHHHHHC-CCeEEEEECCHHHH-HHHHHHHHHcCC--ceEEEEecccc-ccc-cCCccEEEEcc
Confidence 36889999999999999999887 77999999999998 777777776655 33444333322 222 67999999999
Q ss_pred cccCcccchHHHHHHHHHHhhcCCCCceeeccc
Q 030558 87 ILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLT 119 (175)
Q Consensus 87 ~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~ 119 (175)
++++. ..+.+..+++++.++|+|||.+++...
T Consensus 193 ~~~~~-~~~~~~~~l~~~~~~LkpgG~l~i~~~ 224 (286)
T 3m70_A 193 VFMFL-NRERVPSIIKNMKEHTNVGGYNLIVAA 224 (286)
T ss_dssp SGGGS-CGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred chhhC-CHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 98544 456778999999999999999777633
No 64
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.75 E-value=3.6e-18 Score=120.67 Aligned_cols=110 Identities=9% Similarity=0.145 Sum_probs=81.9
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASD 86 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~ 86 (175)
.++.+|||+|||+|..+..++...+.+|+++|+|+.++ +.++++....+. .+..+..+.. ..++++++||+|++..
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~-~~a~~~~~~~~~--~~~~~~~d~~-~~~~~~~~fD~v~~~~ 97 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQL-KKAENFSRENNF--KLNISKGDIR-KLPFKDESMSFVYSYG 97 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHH-HHHHHHHHHHTC--CCCEEECCTT-SCCSCTTCEEEEEECS
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHH-HHHHHHHHhcCC--ceEEEECchh-hCCCCCCceeEEEEcC
Confidence 35789999999999985544444578999999999998 666655544332 2334433332 3456678999999999
Q ss_pred cccCcccchHHHHHHHHHHhhcCCCCceeeccccC
Q 030558 87 ILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKN 121 (175)
Q Consensus 87 ~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~ 121 (175)
+++|.. .++...+++++.++|+|||.+++.....
T Consensus 98 ~l~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 131 (209)
T 2p8j_A 98 TIFHMR-KNDVKEAIDEIKRVLKPGGLACINFLTT 131 (209)
T ss_dssp CGGGSC-HHHHHHHHHHHHHHEEEEEEEEEEEEET
T ss_pred hHHhCC-HHHHHHHHHHHHHHcCCCcEEEEEEecc
Confidence 986653 4677899999999999999999986544
No 65
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.75 E-value=3e-18 Score=127.09 Aligned_cols=148 Identities=15% Similarity=0.113 Sum_probs=91.9
Q ss_pred CCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCC--------------C--------------
Q 030558 8 ERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGIT--------------P-------------- 59 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~--------------~-------------- 59 (175)
++.+|||||||+|..+..++...+.+|+|+|+|+.|+ +.++++....... .
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l-~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNR-QELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHH-HHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHH-HHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 6789999999999965545444467999999999998 5555443221000 0
Q ss_pred -CcceeeccCCCCCC-----CCCCCccEEEeCCcccCccc-chHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCC
Q 030558 60 -ALPHIKHSWGDAFP-----IPNPDWDLILASDILLYVKQ-YSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPW 132 (175)
Q Consensus 60 -~~~~~~~~~~~~~~-----~~~~~fD~i~~~~~l~~~~~-~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~ 132 (175)
....+..+..+..+ +++++||+|+++.++++... .+++..+++++.++|||||++++......
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~---------- 219 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEE---------- 219 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESC----------
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCc----------
Confidence 00111123322232 33467999999999854222 34677999999999999999998621100
Q ss_pred CceEee-eeccCCCcchhHHHHHHHHcCCeeEEec
Q 030558 133 PAFLMS-WRRRIGKEDETIFFTSCENAGLEVKHLG 166 (175)
Q Consensus 133 ~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 166 (175)
..+... ........+..++.++++++||++..+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~ 254 (289)
T 2g72_A 220 SWYLAGEARLTVVPVSEEEVREALVRSGYKVRDLR 254 (289)
T ss_dssp CEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred ceEEcCCeeeeeccCCHHHHHHHHHHcCCeEEEee
Confidence 000000 0000111245889999999999877654
No 66
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.75 E-value=5.3e-18 Score=121.21 Aligned_cols=147 Identities=10% Similarity=0.117 Sum_probs=99.3
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCC-CCCCCCCCccEEEeC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGD-AFPIPNPDWDLILAS 85 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~fD~i~~~ 85 (175)
.++.+|||+|||+|.++..+++. +.+|+++|+|+.++ +.++.+.. ..+..+..+ ..++.+++||+|++.
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~~~~~~-~~~~~~~~--------~~~~~d~~~~~~~~~~~~fD~v~~~ 100 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-GTRVSGIEAFPEAA-EQAKEKLD--------HVVLGDIETMDMPYEEEQFDCVIFG 100 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-TCEEEEEESSHHHH-HHHHTTSS--------EEEESCTTTCCCCSCTTCEEEEEEE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-CCeEEEEeCCHHHH-HHHHHhCC--------cEEEcchhhcCCCCCCCccCEEEEC
Confidence 36789999999999999999888 78999999999997 55543321 223333322 245567899999999
Q ss_pred CcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCC-------CCCC-CCCCceEeeeeccCCCcchhHHHHHHHH
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGE-------GTEG-LPWPAFLMSWRRRIGKEDETIFFTSCEN 157 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~-------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (175)
.++++..+ ...+++++.++|+|||.+++..+...... .... .........+.+.+ +..++.+++++
T Consensus 101 ~~l~~~~~---~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~ 174 (230)
T 3cc8_A 101 DVLEHLFD---PWAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFF---TFNEMLRMFLK 174 (230)
T ss_dssp SCGGGSSC---HHHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCC---CHHHHHHHHHH
T ss_pred ChhhhcCC---HHHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEe---cHHHHHHHHHH
Confidence 99955543 45999999999999999999865432110 0000 00000000011112 35889999999
Q ss_pred cCCeeEEecceE
Q 030558 158 AGLEVKHLGSRV 169 (175)
Q Consensus 158 ~g~~~~~~~~~~ 169 (175)
+||++.++....
T Consensus 175 ~Gf~~~~~~~~~ 186 (230)
T 3cc8_A 175 AGYSISKVDRVY 186 (230)
T ss_dssp TTEEEEEEEEEE
T ss_pred cCCeEEEEEecc
Confidence 999988876544
No 67
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.75 E-value=6.8e-17 Score=117.33 Aligned_cols=107 Identities=14% Similarity=0.219 Sum_probs=79.3
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASD 86 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~ 86 (175)
.++.+|||+|||+|.++..+++. +.+|+++|+|+.++ +.++++....+. .+..+..+..+ .+. .++||+|++..
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~l-~~a~~~~~~~~~--~v~~~~~d~~~-~~~-~~~fD~v~~~~ 113 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAER-GYEVVGLDLHEEML-RVARRKAKERNL--KIEFLQGDVLE-IAF-KNEFDAVTMFF 113 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHH-HHHHHHHHHTTC--CCEEEESCGGG-CCC-CSCEEEEEECS
T ss_pred cCCCEEEEeCCCCCHHHHHHHHC-CCeEEEEECCHHHH-HHHHHHHHhcCC--ceEEEECChhh-ccc-CCCccEEEEcC
Confidence 35689999999999999999887 78999999999998 677766665444 23344333322 222 36899999864
Q ss_pred cccCcccchHHHHHHHHHHhhcCCCCceeeccc
Q 030558 87 ILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLT 119 (175)
Q Consensus 87 ~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~ 119 (175)
...+....++...+++++.++|+|||.+++..+
T Consensus 114 ~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 114 STIMYFDEEDLRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp SGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CchhcCCHHHHHHHHHHHHHHcCCCeEEEEecc
Confidence 332333456778999999999999999987643
No 68
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.75 E-value=2e-18 Score=122.71 Aligned_cols=106 Identities=15% Similarity=0.187 Sum_probs=82.4
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASD 86 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~ 86 (175)
.++.+|||+|||+|.++..+++. +.+|+++|+|+.++ +.++++..... .+..+..+..+. + .+++||+|+++.
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~-~~a~~~~~~~~---~~~~~~~d~~~~-~-~~~~fD~v~~~~ 122 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPH-CKRLTVIDVMPRAI-GRACQRTKRWS---HISWAATDILQF-S-TAELFDLIVVAE 122 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGG-EEEEEEEESCHHHH-HHHHHHTTTCS---SEEEEECCTTTC-C-CSCCEEEEEEES
T ss_pred CCCCcEEEEcCCCCHHHHHHHHc-CCEEEEEECCHHHH-HHHHHhcccCC---CeEEEEcchhhC-C-CCCCccEEEEcc
Confidence 35678999999999999999887 67999999999998 66665554321 233333333222 2 467999999999
Q ss_pred cccCcccchHHHHHHHHHHhhcCCCCceeeccc
Q 030558 87 ILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLT 119 (175)
Q Consensus 87 ~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~ 119 (175)
+++|..+.+.+..+++++.++|+|||.+++..+
T Consensus 123 ~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 123 VLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp CGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred HHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEec
Confidence 998877777778999999999999999998643
No 69
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.75 E-value=2.3e-17 Score=116.07 Aligned_cols=145 Identities=14% Similarity=0.111 Sum_probs=97.6
Q ss_pred CCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCCc
Q 030558 8 ERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASDI 87 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~~ 87 (175)
++ +|||+|||+|.++..+++. +.+|+++|+|+.++ +.++++....+. .+..+..+.. ..++.+++||+|+++..
T Consensus 30 ~~-~vLdiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~-~~a~~~~~~~~~--~~~~~~~d~~-~~~~~~~~fD~v~~~~~ 103 (202)
T 2kw5_A 30 QG-KILCLAEGEGRNACFLASL-GYEVTAVDQSSVGL-AKAKQLAQEKGV--KITTVQSNLA-DFDIVADAWEGIVSIFC 103 (202)
T ss_dssp SS-EEEECCCSCTHHHHHHHTT-TCEEEEECSSHHHH-HHHHHHHHHHTC--CEEEECCBTT-TBSCCTTTCSEEEEECC
T ss_pred CC-CEEEECCCCCHhHHHHHhC-CCeEEEEECCHHHH-HHHHHHHHhcCC--ceEEEEcChh-hcCCCcCCccEEEEEhh
Confidence 45 9999999999999999887 77999999999998 666666554333 2233333322 23455679999999643
Q ss_pred ccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCeeEEecc
Q 030558 88 LLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVKHLGS 167 (175)
Q Consensus 88 l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 167 (175)
+. ..++...+++++.++|+|||.+++..+......... ..+. ..... .+..++.++++ ||++..+.+
T Consensus 104 --~~-~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~--~~~~---~~~~~---~~~~~l~~~l~--Gf~v~~~~~ 170 (202)
T 2kw5_A 104 --HL-PSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNT--GGPK---DLDLL---PKLETLQSELP--SLNWLIANN 170 (202)
T ss_dssp --CC-CHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTS--CCSS---SGGGC---CCHHHHHHHCS--SSCEEEEEE
T ss_pred --cC-CHHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCC--CCCC---cceee---cCHHHHHHHhc--CceEEEEEE
Confidence 22 345778999999999999999999865443221100 0000 00011 23578888888 999888766
Q ss_pred eEEE
Q 030558 168 RVYC 171 (175)
Q Consensus 168 ~~~~ 171 (175)
....
T Consensus 171 ~~~~ 174 (202)
T 2kw5_A 171 LERN 174 (202)
T ss_dssp EEEE
T ss_pred EEee
Confidence 5443
No 70
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.75 E-value=2.3e-17 Score=121.32 Aligned_cols=159 Identities=11% Similarity=0.037 Sum_probs=100.8
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCC--CcEEEEeCChH------HHHHHHHHHHhhCCCCCCcceeecc-C-CCCCCCC
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMN--LDITTSDYNDQ------EIEDNIAYNSTTNGITPALPHIKHS-W-GDAFPIP 75 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~--~~v~~~D~s~~------~l~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~ 75 (175)
..++.+|||||||+|.++..+++..+ .+|+++|+|+. ++ +.++++....+...++..+..+ . ...+++.
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 119 (275)
T 3bkx_A 41 VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTL-GQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIA 119 (275)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCH-HHHHHHHHTSTTGGGEEEECSCCTTTCCGGGT
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHH-HHHHHHHHhcCCCCceEEEECChhhhccCCCC
Confidence 45788999999999999999988753 78999999997 87 6777776665542233333332 1 1123446
Q ss_pred CCCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCC-CCCCCCCCceE----e---e--eeccCCC
Q 030558 76 NPDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGE-GTEGLPWPAFL----M---S--WRRRIGK 145 (175)
Q Consensus 76 ~~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~-~~~~~~~~~~~----~---~--~~~~~~~ 145 (175)
+++||+|++..++++..+.. .+++.+.++++|||.+++......... .........+. . . .......
T Consensus 120 ~~~fD~v~~~~~l~~~~~~~---~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (275)
T 3bkx_A 120 DQHFDRVVLAHSLWYFASAN---ALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAMIQGLLYAIAPSDVANIRTL 196 (275)
T ss_dssp TCCCSEEEEESCGGGSSCHH---HHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHHHHHHHHHHSCCTTCSCCCC
T ss_pred CCCEEEEEEccchhhCCCHH---HHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHHHHHHHhhcccccccccccc
Confidence 78999999999996665443 566666777777999998744332211 00000000000 0 0 0000011
Q ss_pred cchhHHHHHHHHcCCeeEEecce
Q 030558 146 EDETIFFTSCENAGLEVKHLGSR 168 (175)
Q Consensus 146 ~~~~~~~~~~~~~g~~~~~~~~~ 168 (175)
.+...+.++++++||++.+....
T Consensus 197 ~s~~~l~~~l~~aGf~~~~~~~~ 219 (275)
T 3bkx_A 197 ITPDTLAQIAHDNTWTYTAGTIV 219 (275)
T ss_dssp CCHHHHHHHHHHHTCEEEECCCB
T ss_pred CCHHHHHHHHHHCCCeeEEEEEe
Confidence 24588999999999998877553
No 71
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.74 E-value=9.1e-19 Score=130.15 Aligned_cols=147 Identities=12% Similarity=0.189 Sum_probs=90.2
Q ss_pred cCCCcEEEeCCCccHHHHHHH----HhC-CCc--EEEEeCChHHHHHHHHHHHhhC-CCCCCcceeeccC--CCC--C--
Q 030558 7 IERRRCIELGSGTGALAIFLR----KAM-NLD--ITTSDYNDQEIEDNIAYNSTTN-GITPALPHIKHSW--GDA--F-- 72 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~----~~~-~~~--v~~~D~s~~~l~~~~~~~~~~~-~~~~~~~~~~~~~--~~~--~-- 72 (175)
.++.+|||||||+|.++..++ ... +.. ++++|+|++|+ +.++++.... +. ..+.+.+ ++. +
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml-~~a~~~~~~~~~~----~~v~~~~~~~~~~~~~~ 125 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQI-AKYKELVAKTSNL----ENVKFAWHKETSSEYQS 125 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHH-HHHHHHHHTCSSC----TTEEEEEECSCHHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHH-HHHHHHHHhccCC----CcceEEEEecchhhhhh
Confidence 356799999999998775433 221 333 39999999998 5555554432 22 2222222 221 1
Q ss_pred ----CCCCCCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEe--eeeccCCCc
Q 030558 73 ----PIPNPDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLM--SWRRRIGKE 146 (175)
Q Consensus 73 ----~~~~~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 146 (175)
++.+++||+|+++.+++++.+ +..++++++++|||||++++............. ..+.. .........
T Consensus 126 ~~~~~~~~~~fD~V~~~~~l~~~~d---~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 199 (292)
T 2aot_A 126 RMLEKKELQKWDFIHMIQMLYYVKD---IPATLKFFHSLLGTNAKMLIIVVSGSSGWDKLW---KKYGSRFPQDDLCQYI 199 (292)
T ss_dssp HHHTTTCCCCEEEEEEESCGGGCSC---HHHHHHHHHHTEEEEEEEEEEEECTTSHHHHHH---HHHGGGSCCCTTCCCC
T ss_pred hhccccCCCceeEEEEeeeeeecCC---HHHHHHHHHHHcCCCcEEEEEEecCCccHHHHH---HHHHHhccCCCcccCC
Confidence 245789999999999966654 449999999999999999987433211000000 00000 000001112
Q ss_pred chhHHHHHHHHcCCeeEE
Q 030558 147 DETIFFTSCENAGLEVKH 164 (175)
Q Consensus 147 ~~~~~~~~~~~~g~~~~~ 164 (175)
+..++.++++++||++..
T Consensus 200 ~~~~~~~~l~~aGf~~~~ 217 (292)
T 2aot_A 200 TSDDLTQMLDNLGLKYEC 217 (292)
T ss_dssp CHHHHHHHHHHHTCCEEE
T ss_pred CHHHHHHHHHHCCCceEE
Confidence 358899999999998765
No 72
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.74 E-value=6.9e-18 Score=123.17 Aligned_cols=103 Identities=11% Similarity=0.084 Sum_probs=78.7
Q ss_pred cccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCC----CCCCCCcc
Q 030558 5 EWIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAF----PIPNPDWD 80 (175)
Q Consensus 5 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~fD 80 (175)
...++.+|||||||+|.++..+++. +.+|+++|+|+.|+ +.++++.... .+..++.+.. ...+++||
T Consensus 42 ~l~~g~~VLDlGcGtG~~a~~La~~-g~~V~gvD~S~~ml-~~Ar~~~~~~-------~v~~~~~~~~~~~~~~~~~~fD 112 (261)
T 3iv6_A 42 NIVPGSTVAVIGASTRFLIEKALER-GASVTVFDFSQRMC-DDLAEALADR-------CVTIDLLDITAEIPKELAGHFD 112 (261)
T ss_dssp TCCTTCEEEEECTTCHHHHHHHHHT-TCEEEEEESCHHHH-HHHHHHTSSS-------CCEEEECCTTSCCCGGGTTCCS
T ss_pred CCCCcCEEEEEeCcchHHHHHHHhc-CCEEEEEECCHHHH-HHHHHHHHhc-------cceeeeeecccccccccCCCcc
Confidence 3456889999999999999999887 78999999999998 6776665443 1223332211 12256899
Q ss_pred EEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeecc
Q 030558 81 LILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHL 118 (175)
Q Consensus 81 ~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~ 118 (175)
+|+++.+++++. .++...+++++.++| |||+++++.
T Consensus 113 ~Vv~~~~l~~~~-~~~~~~~l~~l~~lL-PGG~l~lS~ 148 (261)
T 3iv6_A 113 FVLNDRLINRFT-TEEARRACLGMLSLV-GSGTVRASV 148 (261)
T ss_dssp EEEEESCGGGSC-HHHHHHHHHHHHHHH-TTSEEEEEE
T ss_pred EEEEhhhhHhCC-HHHHHHHHHHHHHhC-cCcEEEEEe
Confidence 999999985443 556778999999999 999999873
No 73
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.74 E-value=1.8e-17 Score=121.20 Aligned_cols=132 Identities=15% Similarity=0.153 Sum_probs=96.9
Q ss_pred CCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCC-CCCCCccEEEeCC
Q 030558 8 ERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFP-IPNPDWDLILASD 86 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~fD~i~~~~ 86 (175)
++.+|||+|||+|.+++.+++....+|+|+|+++.++ +.++++...++...++..+..+..+..+ +.+++||+|+++.
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~-~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~np 127 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLA-DMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNP 127 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHH-HHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECC
T ss_pred CCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHH-HHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECC
Confidence 6789999999999999999988555999999999998 8888888888875455555555443332 3467999999987
Q ss_pred cccCc-----------------ccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchh
Q 030558 87 ILLYV-----------------KQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDET 149 (175)
Q Consensus 87 ~l~~~-----------------~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (175)
.++.. .....+..+++.+.++|+|||++++.... ....
T Consensus 128 Py~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~-------------------------~~~~ 182 (259)
T 3lpm_A 128 PYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRP-------------------------ERLL 182 (259)
T ss_dssp CC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECT-------------------------TTHH
T ss_pred CCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcH-------------------------HHHH
Confidence 75332 00134568999999999999988884211 1136
Q ss_pred HHHHHHHHcCCeeEEe
Q 030558 150 IFFTSCENAGLEVKHL 165 (175)
Q Consensus 150 ~~~~~~~~~g~~~~~~ 165 (175)
++.+.+++.||.+..+
T Consensus 183 ~~~~~l~~~~~~~~~~ 198 (259)
T 3lpm_A 183 DIIDIMRKYRLEPKRI 198 (259)
T ss_dssp HHHHHHHHTTEEEEEE
T ss_pred HHHHHHHHCCCceEEE
Confidence 6777788888876654
No 74
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.74 E-value=2.2e-17 Score=124.80 Aligned_cols=148 Identities=14% Similarity=0.041 Sum_probs=102.0
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILAS 85 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~ 85 (175)
.++.+|||+|||+|..+..+++.. +.+++++|+ +.++ +.++++....+...++..+..+..+. .+. +||+|++.
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~--~p~-~~D~v~~~ 242 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPA-SAAHRRFLDTGLSGRAQVVVGSFFDP--LPA-GAGGYVLS 242 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHH-HHHHHHHHHTTCTTTEEEEECCTTSC--CCC-SCSEEEEE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHH-HHHHHhhhhcCcCcCeEEecCCCCCC--CCC-CCcEEEEe
Confidence 346899999999999999998865 567999999 8887 77777776666545555555554422 222 89999999
Q ss_pred CcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCce--EeeeeccCCCcchhHHHHHHHHcCCeeE
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAF--LMSWRRRIGKEDETIFFTSCENAGLEVK 163 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 163 (175)
++++++. .++..++++++++.|+|||++++........ . ....+ ...........+..++.++++++||++.
T Consensus 243 ~vlh~~~-~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~-~----~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~ 316 (332)
T 3i53_A 243 AVLHDWD-DLSAVAILRRCAEAAGSGGVVLVIEAVAGDE-H----AGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVR 316 (332)
T ss_dssp SCGGGSC-HHHHHHHHHHHHHHHTTTCEEEEEECCCC--------CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEE
T ss_pred hhhccCC-HHHHHHHHHHHHHhcCCCCEEEEEeecCCCC-C----ccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEE
Confidence 9996665 4456799999999999999999874433222 0 00000 0000001111245899999999999877
Q ss_pred Ee
Q 030558 164 HL 165 (175)
Q Consensus 164 ~~ 165 (175)
++
T Consensus 317 ~~ 318 (332)
T 3i53_A 317 AA 318 (332)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 75
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.74 E-value=1.2e-17 Score=119.74 Aligned_cols=124 Identities=13% Similarity=0.107 Sum_probs=92.6
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCC-CCCccEEEeC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIP-NPDWDLILAS 85 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~fD~i~~~ 85 (175)
.++.+|||+|||+|.++..+++. +.+|+++|+|+.++ +.++++ ...+..+..+..+.+++. +++||+|+++
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~-~~a~~~------~~~~~~~~~d~~~~~~~~~~~~fD~v~~~ 118 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ-AARWAAYDFSPELL-KLARAN------APHADVYEWNGKGELPAGLGAPFGLIVSR 118 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG-SSEEEEEESCHHHH-HHHHHH------CTTSEEEECCSCSSCCTTCCCCEEEEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc-CCEEEEEECCHHHH-HHHHHh------CCCceEEEcchhhccCCcCCCCEEEEEeC
Confidence 46789999999999999999887 78999999999998 666555 123455555665566666 7899999987
Q ss_pred CcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCeeEEe
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVKHL 165 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 165 (175)
. +. ..+++++.++|||||.++. ..... +...+.+.++++||++..+
T Consensus 119 ~------~~---~~~l~~~~~~LkpgG~l~~----------------------~~~~~---~~~~~~~~l~~~Gf~~~~~ 164 (226)
T 3m33_A 119 R------GP---TSVILRLPELAAPDAHFLY----------------------VGPRL---NVPEVPERLAAVGWDIVAE 164 (226)
T ss_dssp S------CC---SGGGGGHHHHEEEEEEEEE----------------------EESSS---CCTHHHHHHHHTTCEEEEE
T ss_pred C------CH---HHHHHHHHHHcCCCcEEEE----------------------eCCcC---CHHHHHHHHHHCCCeEEEE
Confidence 2 22 2788999999999997771 11111 2367888999999998877
Q ss_pred cceEEEE
Q 030558 166 GSRVYCI 172 (175)
Q Consensus 166 ~~~~~~i 172 (175)
....+.+
T Consensus 165 ~~~~~~~ 171 (226)
T 3m33_A 165 DHVSVLA 171 (226)
T ss_dssp EEEEEEE
T ss_pred Eeeeecc
Confidence 6555443
No 76
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.74 E-value=9.4e-17 Score=113.48 Aligned_cols=126 Identities=17% Similarity=0.158 Sum_probs=93.4
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeC
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILAS 85 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~ 85 (175)
..++.+|||+|||+|.++..+++. +.+|+++|+|+.++ +.++++....+...++..+..+..+.++ ..+.||+|++.
T Consensus 53 ~~~~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~-~~a~~~~~~~g~~~~v~~~~~d~~~~~~-~~~~~D~v~~~ 129 (204)
T 3njr_A 53 PRRGELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRI-ENIQKNIDTYGLSPRMRAVQGTAPAALA-DLPLPEAVFIG 129 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHH-HHHHHHHHHTTCTTTEEEEESCTTGGGT-TSCCCSEEEEC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHH-HHHHHHHHHcCCCCCEEEEeCchhhhcc-cCCCCCEEEEC
Confidence 346789999999999999999998 88999999999998 7888888777663234444433332222 23479999987
Q ss_pred CcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCeeEEe
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVKHL 165 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 165 (175)
..+ +.. +++++.++|+|||++++.... ..+...+.+.+++.|+++..+
T Consensus 130 ~~~-------~~~-~l~~~~~~LkpgG~lv~~~~~------------------------~~~~~~~~~~l~~~g~~i~~i 177 (204)
T 3njr_A 130 GGG-------SQA-LYDRLWEWLAPGTRIVANAVT------------------------LESETLLTQLHARHGGQLLRI 177 (204)
T ss_dssp SCC-------CHH-HHHHHHHHSCTTCEEEEEECS------------------------HHHHHHHHHHHHHHCSEEEEE
T ss_pred Ccc-------cHH-HHHHHHHhcCCCcEEEEEecC------------------------cccHHHHHHHHHhCCCcEEEE
Confidence 644 233 999999999999988885221 123467788899999887776
Q ss_pred c
Q 030558 166 G 166 (175)
Q Consensus 166 ~ 166 (175)
.
T Consensus 178 ~ 178 (204)
T 3njr_A 178 D 178 (204)
T ss_dssp E
T ss_pred E
Confidence 3
No 77
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.74 E-value=3.7e-17 Score=112.61 Aligned_cols=127 Identities=14% Similarity=0.173 Sum_probs=92.5
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEe
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILA 84 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~ 84 (175)
..++.+|||+|||+|.++..+++.. +.+|+++|+|+.++ +.++++....+....+ .+..+..+.++...++||+|++
T Consensus 23 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~-~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~D~i~~ 100 (178)
T 3hm2_A 23 PKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERR-ERILSNAINLGVSDRI-AVQQGAPRAFDDVPDNPDVIFI 100 (178)
T ss_dssp CCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHH-HHHHHHHHTTTCTTSE-EEECCTTGGGGGCCSCCSEEEE
T ss_pred ccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHH-HHHHHHHHHhCCCCCE-EEecchHhhhhccCCCCCEEEE
Confidence 3467899999999999999998875 67899999999998 7778777776663344 4443333333333378999999
Q ss_pred CCcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCeeEE
Q 030558 85 SDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVKH 164 (175)
Q Consensus 85 ~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 164 (175)
..++.+ ..+++++.+.|+|||++++.... ..+...+.+.+++.|+++..
T Consensus 101 ~~~~~~-------~~~l~~~~~~L~~gG~l~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~ 149 (178)
T 3hm2_A 101 GGGLTA-------PGVFAAAWKRLPVGGRLVANAVT------------------------VESEQMLWALRKQFGGTISS 149 (178)
T ss_dssp CC-TTC-------TTHHHHHHHTCCTTCEEEEEECS------------------------HHHHHHHHHHHHHHCCEEEE
T ss_pred CCcccH-------HHHHHHHHHhcCCCCEEEEEeec------------------------cccHHHHHHHHHHcCCeeEE
Confidence 988733 38999999999999988874211 11235667778888877655
Q ss_pred e
Q 030558 165 L 165 (175)
Q Consensus 165 ~ 165 (175)
+
T Consensus 150 ~ 150 (178)
T 3hm2_A 150 F 150 (178)
T ss_dssp E
T ss_pred E
Confidence 4
No 78
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.74 E-value=6.1e-17 Score=123.81 Aligned_cols=156 Identities=17% Similarity=0.161 Sum_probs=102.5
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCC-CCCCCCccEEEe
Q 030558 7 IERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAF-PIPNPDWDLILA 84 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~fD~i~~ 84 (175)
...++|||||||+|.++..+++.. +.+++++|+ +.++ +.++++....+...++..+..+..+.. +++ ++||+|++
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~ 254 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQL-EMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWM 254 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHH-HHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHH-HHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEE
Confidence 356899999999999999998865 668999999 8887 777777665554334444444443321 233 78999999
Q ss_pred CCcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCC---CC-CCceE-eeeeccCCCcchhHHHHHHHHcC
Q 030558 85 SDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEG---LP-WPAFL-MSWRRRIGKEDETIFFTSCENAG 159 (175)
Q Consensus 85 ~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~---~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~g 159 (175)
..+++++. .++...+++++.++|+|||++++............. .. ..... ..........+..++.++++++|
T Consensus 255 ~~vlh~~~-~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AG 333 (363)
T 3dp7_A 255 SQFLDCFS-EEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAG 333 (363)
T ss_dssp ESCSTTSC-HHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTT
T ss_pred echhhhCC-HHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcC
Confidence 99996555 456678999999999999999887433322110000 00 00000 00000001124689999999999
Q ss_pred CeeEEec
Q 030558 160 LEVKHLG 166 (175)
Q Consensus 160 ~~~~~~~ 166 (175)
|++.++.
T Consensus 334 f~~v~~~ 340 (363)
T 3dp7_A 334 LEVEEIQ 340 (363)
T ss_dssp EEESCCC
T ss_pred CeEEEEE
Confidence 9977664
No 79
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.73 E-value=2e-18 Score=127.86 Aligned_cols=107 Identities=13% Similarity=0.134 Sum_probs=81.4
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhC--CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEE
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAM--NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLIL 83 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~ 83 (175)
..++.+|||+|||+|..+..+++.. +.+|+++|+|+.++ +.++++....+. ++..+..+.. ..++ +++||+|+
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~-~~a~~~~~~~~~--~v~~~~~d~~-~~~~-~~~fD~v~ 94 (284)
T 3gu3_A 20 ITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLL-AEARELFRLLPY--DSEFLEGDAT-EIEL-NDKYDIAI 94 (284)
T ss_dssp CCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHH-HHHHHHHHSSSS--EEEEEESCTT-TCCC-SSCEEEEE
T ss_pred cCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHhcCC--ceEEEEcchh-hcCc-CCCeeEEE
Confidence 4467899999999999999998864 46899999999998 666666655333 2333333332 2333 46999999
Q ss_pred eCCcccCcccchHHHHHHHHHHhhcCCCCceeecccc
Q 030558 84 ASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTK 120 (175)
Q Consensus 84 ~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~ 120 (175)
+..++.+.. +...++++++++|+|||.+++..+.
T Consensus 95 ~~~~l~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 95 CHAFLLHMT---TPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp EESCGGGCS---SHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ECChhhcCC---CHHHHHHHHHHHcCCCCEEEEEecc
Confidence 999985554 4459999999999999999987554
No 80
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.73 E-value=6.5e-17 Score=112.65 Aligned_cols=127 Identities=17% Similarity=0.223 Sum_probs=94.4
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeC-
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILAS- 85 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~- 85 (175)
.++.+|||+|||+|.++..+++. +.+|+++|+++.++ +.++++.. .+..+..+..+ .++++++||+|++.
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~~~~~~-~~a~~~~~------~~~~~~~d~~~-~~~~~~~~D~i~~~~ 115 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQ-GHDVLGTDLDPILI-DYAKQDFP------EARWVVGDLSV-DQISETDFDLIVSAG 115 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHH-HHHHHHCT------TSEEEECCTTT-SCCCCCCEEEEEECC
T ss_pred cCCCeEEEECCCCCHHHHHHHHC-CCcEEEEcCCHHHH-HHHHHhCC------CCcEEEccccc-CCCCCCceeEEEECC
Confidence 36789999999999999999887 78999999999998 66555432 12333333322 34556799999998
Q ss_pred CcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCeeEEe
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVKHL 165 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 165 (175)
.++.+ ...++...+++++.++|+|||.+++...... .+ +...+.+.++++||++.+.
T Consensus 116 ~~~~~-~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~-------------------~~---~~~~~~~~l~~~Gf~~~~~ 172 (195)
T 3cgg_A 116 NVMGF-LAEDGREPALANIHRALGADGRAVIGFGAGR-------------------GW---VFGDFLEVAERVGLELENA 172 (195)
T ss_dssp CCGGG-SCHHHHHHHHHHHHHHEEEEEEEEEEEETTS-------------------SC---CHHHHHHHHHHHTEEEEEE
T ss_pred cHHhh-cChHHHHHHHHHHHHHhCCCCEEEEEeCCCC-------------------Cc---CHHHHHHHHHHcCCEEeee
Confidence 66633 3346677999999999999998888532210 11 2488999999999998876
No 81
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.73 E-value=1.5e-16 Score=112.22 Aligned_cols=124 Identities=16% Similarity=0.081 Sum_probs=91.5
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEe
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILA 84 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~ 84 (175)
..++.+|||+|||+|.++..+++.. ..+|+++|+|+.++ +.++++....+. .++..+..+..+..+ ..++||+|++
T Consensus 38 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~-~~a~~~~~~~~~-~~v~~~~~d~~~~~~-~~~~~D~i~~ 114 (204)
T 3e05_A 38 LQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYL-GFIRDNLKKFVA-RNVTLVEAFAPEGLD-DLPDPDRVFI 114 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHH-HHHHHHHHHHTC-TTEEEEECCTTTTCT-TSCCCSEEEE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHH-HHHHHHHHHhCC-CcEEEEeCChhhhhh-cCCCCCEEEE
Confidence 4467899999999999999999884 47899999999998 777777766555 333444333322222 2367999999
Q ss_pred CCcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCee
Q 030558 85 SDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEV 162 (175)
Q Consensus 85 ~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 162 (175)
..++ . +...+++++.++|+|||++++..... .....+.+.++++||.+
T Consensus 115 ~~~~---~---~~~~~l~~~~~~LkpgG~l~~~~~~~------------------------~~~~~~~~~l~~~g~~~ 162 (204)
T 3e05_A 115 GGSG---G---MLEEIIDAVDRRLKSEGVIVLNAVTL------------------------DTLTKAVEFLEDHGYMV 162 (204)
T ss_dssp SCCT---T---CHHHHHHHHHHHCCTTCEEEEEECBH------------------------HHHHHHHHHHHHTTCEE
T ss_pred CCCC---c---CHHHHHHHHHHhcCCCeEEEEEeccc------------------------ccHHHHHHHHHHCCCce
Confidence 8876 2 44499999999999999888842211 12477888899999843
No 82
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.73 E-value=9.3e-19 Score=126.29 Aligned_cols=108 Identities=17% Similarity=0.105 Sum_probs=77.2
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCC-CCCCCCCccEEEe-
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDA-FPIPNPDWDLILA- 84 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~fD~i~~- 84 (175)
.++.+|||||||+|.++..+++....+|+++|+|+.|+ +.++++....+. ++..+..+..+. .++.+++||+|++
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l-~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~~~fD~V~~d 135 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVF-QRLRDWAPRQTH--KVIPLKGLWEDVAPTLPDGHFDGILYD 135 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHH-HHHHHHGGGCSS--EEEEEESCHHHHGGGSCTTCEEEEEEC
T ss_pred CCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHH-HHHHHHHHhcCC--CeEEEecCHHHhhcccCCCceEEEEEC
Confidence 35789999999999999999775445899999999998 676666655432 233333333221 1566789999999
Q ss_pred CCcc-cCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 85 SDIL-LYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 85 ~~~l-~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
...+ ...........+++++.++|||||++++.
T Consensus 136 ~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~ 169 (236)
T 1zx0_A 136 TYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp CCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred CcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEE
Confidence 5443 12222345568899999999999998876
No 83
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.73 E-value=2e-19 Score=139.76 Aligned_cols=147 Identities=11% Similarity=0.034 Sum_probs=96.1
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASD 86 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~ 86 (175)
.++.+|||||||+|.++..+++. +.+|+|+|+|+.++ +.++++ +...............+++.+++||+|++.+
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~-g~~v~gvD~s~~~~-~~a~~~----~~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~ 179 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEA-GVRHLGFEPSSGVA-AKAREK----GIRVRTDFFEKATADDVRRTEGPANVIYAAN 179 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHT-TCEEEEECCCHHHH-HHHHTT----TCCEECSCCSHHHHHHHHHHHCCEEEEEEES
T ss_pred CCCCEEEEecCCCCHHHHHHHHc-CCcEEEECCCHHHH-HHHHHc----CCCcceeeechhhHhhcccCCCCEEEEEECC
Confidence 46789999999999999999886 77999999999998 555433 2210000110111122334568999999999
Q ss_pred cccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCeeEEec
Q 030558 87 ILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVKHLG 166 (175)
Q Consensus 87 ~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 166 (175)
+++|.. ++..+++++.++|||||.+++..+......... .+..+...+...+ +...+.++++++||++.++.
T Consensus 180 vl~h~~---d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~--~~~~~~~~~~~~~---s~~~l~~ll~~aGf~~~~~~ 251 (416)
T 4e2x_A 180 TLCHIP---YVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKT--SFDQIFDEHFFLF---SATSVQGMAQRCGFELVDVQ 251 (416)
T ss_dssp CGGGCT---THHHHHHHHHHHEEEEEEEEEEEECHHHHHHHT--CGGGCSTTCCEEC---CHHHHHHHHHHTTEEEEEEE
T ss_pred hHHhcC---CHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhc--chhhhhhhhhhcC---CHHHHHHHHHHcCCEEEEEE
Confidence 995554 566999999999999999999754432111000 0000000011112 35889999999999987764
Q ss_pred c
Q 030558 167 S 167 (175)
Q Consensus 167 ~ 167 (175)
.
T Consensus 252 ~ 252 (416)
T 4e2x_A 252 R 252 (416)
T ss_dssp E
T ss_pred E
Confidence 3
No 84
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.72 E-value=1.3e-17 Score=126.91 Aligned_cols=157 Identities=13% Similarity=0.056 Sum_probs=103.0
Q ss_pred ccC-CCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEE
Q 030558 6 WIE-RRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLIL 83 (175)
Q Consensus 6 ~~~-~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~ 83 (175)
..+ +.+|||||||+|.++..+++.. +.+++++|+ +.++ +.++++....+...++..+..+..+..++.++.||+|+
T Consensus 176 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~ 253 (352)
T 3mcz_A 176 VFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTR-DAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVM 253 (352)
T ss_dssp GGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGH-HHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEE
T ss_pred CcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHH-HHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEE
Confidence 344 7899999999999999998875 568999999 7787 67776666655533444444444332212456799999
Q ss_pred eCCcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCC-CCCCCCCceEe-eeeccCCCcchhHHHHHHHHcCCe
Q 030558 84 ASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEG-TEGLPWPAFLM-SWRRRIGKEDETIFFTSCENAGLE 161 (175)
Q Consensus 84 ~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~ 161 (175)
+..+++++. .++...+++++.+.|+|||++++.......... ........+.. .........+..++.++++++||+
T Consensus 254 ~~~vlh~~~-~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~ 332 (352)
T 3mcz_A 254 LNDCLHYFD-AREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLA 332 (352)
T ss_dssp EESCGGGSC-HHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCE
T ss_pred EecccccCC-HHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCc
Confidence 999995554 455679999999999999999987443322211 00000000000 000001112458999999999999
Q ss_pred eEEe
Q 030558 162 VKHL 165 (175)
Q Consensus 162 ~~~~ 165 (175)
+.+.
T Consensus 333 ~~~~ 336 (352)
T 3mcz_A 333 VGER 336 (352)
T ss_dssp EEEE
T ss_pred eeee
Confidence 7764
No 85
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.72 E-value=3.6e-17 Score=125.33 Aligned_cols=155 Identities=15% Similarity=0.174 Sum_probs=104.8
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEe
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILA 84 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~ 84 (175)
..++.+|||+|||+|..+..+++.. +.+++++|+ +.++ +.++++....+...++..+..+..+ +.+. .||+|++
T Consensus 200 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~-~~a~~~~~~~~l~~~v~~~~~d~~~--~~p~-~~D~v~~ 274 (369)
T 3gwz_A 200 FSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVA-EEARELLTGRGLADRCEILPGDFFE--TIPD-GADVYLI 274 (369)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHH-HHHHHHHHHTTCTTTEEEEECCTTT--CCCS-SCSEEEE
T ss_pred CccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHH-HHHHHhhhhcCcCCceEEeccCCCC--CCCC-CceEEEh
Confidence 3457899999999999999998875 568999999 8887 7777777766665555555555442 2222 8999999
Q ss_pred CCcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCeeEE
Q 030558 85 SDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVKH 164 (175)
Q Consensus 85 ~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 164 (175)
.++++++. .+...++++++.+.|+|||++++............ .....+...........+.+++.++++++||++.+
T Consensus 275 ~~vlh~~~-d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~-~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~ 352 (369)
T 3gwz_A 275 KHVLHDWD-DDDVVRILRRIATAMKPDSRLLVIDNLIDERPAAS-TLFVDLLLLVLVGGAERSESEFAALLEKSGLRVER 352 (369)
T ss_dssp ESCGGGSC-HHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHH-HHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEEEE
T ss_pred hhhhccCC-HHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCc-hhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeEEE
Confidence 99995554 45566899999999999999999744332221110 00000000000001112458999999999999877
Q ss_pred ecc
Q 030558 165 LGS 167 (175)
Q Consensus 165 ~~~ 167 (175)
+..
T Consensus 353 ~~~ 355 (369)
T 3gwz_A 353 SLP 355 (369)
T ss_dssp EEE
T ss_pred EEE
Confidence 643
No 86
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.72 E-value=2e-17 Score=115.38 Aligned_cols=110 Identities=15% Similarity=0.108 Sum_probs=82.8
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCC-CCCCCccEEEeC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFP-IPNPDWDLILAS 85 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~fD~i~~~ 85 (175)
.++++|||+|||+|.++..+++....+|+++|+|+.++ +.++++...++. .++..+..+..+..+ +.+++||+|+++
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~-~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~fD~i~~~ 120 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSA-AVIARNIEALGL-SGATLRRGAVAAVVAAGTTSPVDLVLAD 120 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHH-HHHHHHHHHHTC-SCEEEEESCHHHHHHHCCSSCCSEEEEC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHH-HHHHHHHHHcCC-CceEEEEccHHHHHhhccCCCccEEEEC
Confidence 47889999999999999988787556799999999998 788888777665 333444333322221 336799999998
Q ss_pred CcccCcccchHHHHHHHHHHh--hcCCCCceeecccc
Q 030558 86 DILLYVKQYSNLIKSLSVLLK--SYKPKDSQVGHLTK 120 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~--~l~pgG~~~~~~~~ 120 (175)
..+ +.. .++...+++++.+ +|+|||.+++....
T Consensus 121 ~p~-~~~-~~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 121 PPY-NVD-SADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp CCT-TSC-HHHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred CCC-Ccc-hhhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 875 332 2466799999999 99999999987543
No 87
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.72 E-value=5.3e-18 Score=125.25 Aligned_cols=147 Identities=11% Similarity=0.034 Sum_probs=87.5
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASD 86 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~ 86 (175)
.++++|||+|||||.++..+++....+|+|+|+|+.|+...++.+...... . ...+. ......++..+||+|++..
T Consensus 84 ~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~~rv~~~-~-~~ni~--~l~~~~l~~~~fD~v~~d~ 159 (291)
T 3hp7_A 84 VEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQDDRVRSM-E-QYNFR--YAEPVDFTEGLPSFASIDV 159 (291)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTCTTEEEE-C-SCCGG--GCCGGGCTTCCCSEEEECC
T ss_pred ccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCccccee-c-ccCce--ecchhhCCCCCCCEEEEEe
Confidence 367899999999999999998885568999999999983323321110000 0 00110 0011112334699999876
Q ss_pred cccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCC-CCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCeeEEe
Q 030558 87 ILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGE-GTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVKHL 165 (175)
Q Consensus 87 ~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 165 (175)
++ + +. ..++.++.++|+|||++++.+.+..... ..+. .....-....++. ...++.+.+.++||.+..+
T Consensus 160 sf-~--sl---~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~-~~G~vrd~~~~~~---~~~~v~~~~~~~Gf~v~~~ 229 (291)
T 3hp7_A 160 SF-I--SL---NLILPALAKILVDGGQVVALVKPQFEAGREQIG-KNGIVRESSIHEK---VLETVTAFAVDYGFSVKGL 229 (291)
T ss_dssp SS-S--CG---GGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC--CCCCCCHHHHHH---HHHHHHHHHHHTTEEEEEE
T ss_pred eH-h--hH---HHHHHHHHHHcCcCCEEEEEECcccccChhhcC-CCCccCCHHHHHH---HHHHHHHHHHHCCCEEEEE
Confidence 65 2 23 3899999999999999988632221111 1110 0000000001111 2477889999999998876
Q ss_pred cc
Q 030558 166 GS 167 (175)
Q Consensus 166 ~~ 167 (175)
..
T Consensus 230 ~~ 231 (291)
T 3hp7_A 230 DF 231 (291)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 88
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.72 E-value=3.2e-17 Score=124.70 Aligned_cols=110 Identities=19% Similarity=0.181 Sum_probs=86.8
Q ss_pred cccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEe
Q 030558 5 EWIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILA 84 (175)
Q Consensus 5 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~ 84 (175)
...++++|||+|||+|.++..+++....+|+|+|+|+ ++ +.++++...++...++..+..+..+ .++++++||+|++
T Consensus 63 ~~~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l-~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~fD~Iis 139 (349)
T 3q7e_A 63 HLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-IS-DYAVKIVKANKLDHVVTIIKGKVEE-VELPVEKVDIIIS 139 (349)
T ss_dssp HHHTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HH-HHHHHHHHHTTCTTTEEEEESCTTT-CCCSSSCEEEEEE
T ss_pred ccCCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HH-HHHHHHHHHcCCCCcEEEEECcHHH-ccCCCCceEEEEE
Confidence 4567899999999999999999998555899999995 87 7788888887775445555555433 3556789999999
Q ss_pred CCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 85 SDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 85 ~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
..+.++......+..+++++.++|||||.++..
T Consensus 140 ~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 140 EWMGYCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp CCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred ccccccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 877655555566779999999999999988754
No 89
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.71 E-value=3e-17 Score=121.17 Aligned_cols=103 Identities=11% Similarity=0.178 Sum_probs=78.1
Q ss_pred cccCCCcEEEeCCCccHHH-HHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEE
Q 030558 5 EWIERRRCIELGSGTGALA-IFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLIL 83 (175)
Q Consensus 5 ~~~~~~~vLDlGcG~G~~~-~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~ 83 (175)
...++.+|||||||+|.++ +.+++..+.+|+++|+|+.|+ +.++++....+. .++ .+..++...+++++||+|+
T Consensus 119 ~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l-~~Ar~~~~~~gl-~~v---~~v~gDa~~l~d~~FDvV~ 193 (298)
T 3fpf_A 119 RFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIA-ELSRKVIEGLGV-DGV---NVITGDETVIDGLEFDVLM 193 (298)
T ss_dssp TCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHH-HHHHHHHHHHTC-CSE---EEEESCGGGGGGCCCSEEE
T ss_pred CCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHH-HHHHHHHHhcCC-CCe---EEEECchhhCCCCCcCEEE
Confidence 3457899999999998766 556665688999999999998 777777666555 333 3444444444468999999
Q ss_pred eCCcccCcccchHHHHHHHHHHhhcCCCCceeecc
Q 030558 84 ASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHL 118 (175)
Q Consensus 84 ~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~ 118 (175)
+.... ++..++++++.++|||||++++..
T Consensus 194 ~~a~~------~d~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 194 VAALA------EPKRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp ECTTC------SCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred ECCCc------cCHHHHHHHHHHHcCCCcEEEEEc
Confidence 86542 345599999999999999999873
No 90
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.71 E-value=1.4e-16 Score=117.73 Aligned_cols=131 Identities=15% Similarity=0.087 Sum_probs=94.0
Q ss_pred CCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCCc
Q 030558 8 ERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASDI 87 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~~ 87 (175)
++++|||+|||+|.+++.+++....+|+|+|+|+.++ +.+++|...++....+..+..+..+... +++||+|++...
T Consensus 125 ~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~-~~a~~n~~~n~~~~~v~~~~~D~~~~~~--~~~fD~Vi~~~p 201 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTF-KFLVENIHLNKVEDRMSAYNMDNRDFPG--ENIADRILMGYV 201 (278)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHH-HHHHHHHHHTTCTTTEEEECSCTTTCCC--CSCEEEEEECCC
T ss_pred CCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHH-HHHHHHHHHcCCCceEEEEECCHHHhcc--cCCccEEEECCc
Confidence 4889999999999999999998444699999999998 8888898888774334444333332222 668999999644
Q ss_pred ccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCeeEEec
Q 030558 88 LLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVKHLG 166 (175)
Q Consensus 88 l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 166 (175)
. .. ..+++++.++|+|||.+++...... ..........+.+.++++|+++..+.
T Consensus 202 ~----~~---~~~l~~~~~~LkpgG~l~~~~~~~~------------------~~~~~~~~~~i~~~~~~~G~~~~~~~ 255 (278)
T 2frn_A 202 V----RT---HEFIPKALSIAKDGAIIHYHNTVPE------------------KLMPREPFETFKRITKEYGYDVEKLN 255 (278)
T ss_dssp S----SG---GGGHHHHHHHEEEEEEEEEEEEEEG------------------GGTTTTTHHHHHHHHHHTTCEEEEEE
T ss_pred h----hH---HHHHHHHHHHCCCCeEEEEEEeecc------------------ccccccHHHHHHHHHHHcCCeeEEee
Confidence 2 12 2788899999999998887522210 01111224677888999999877643
No 91
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.71 E-value=6.2e-17 Score=118.10 Aligned_cols=132 Identities=18% Similarity=0.176 Sum_probs=95.7
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASD 86 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~ 86 (175)
.++.+|||+|||+|.+++.+++. +.+|+++|+++.++ +.++++...++.. +.....+..+. +++++||+|+++.
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~-g~~v~gvDi~~~~v-~~a~~n~~~~~~~--v~~~~~d~~~~--~~~~~fD~Vv~n~ 192 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKL-GGKALGVDIDPMVL-PQAEANAKRNGVR--PRFLEGSLEAA--LPFGPFDLLVANL 192 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCGGGH-HHHHHHHHHTTCC--CEEEESCHHHH--GGGCCEEEEEEEC
T ss_pred CCCCEEEEecCCCcHHHHHHHHh-CCeEEEEECCHHHH-HHHHHHHHHcCCc--EEEEECChhhc--CcCCCCCEEEECC
Confidence 46789999999999999999886 55999999999998 8888888877762 33332222221 3356899999875
Q ss_pred cccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCeeEEe-
Q 030558 87 ILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVKHL- 165 (175)
Q Consensus 87 ~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~- 165 (175)
.. +.+..+++++.+.|+|||+++++... ......+.+.++++||++.++
T Consensus 193 ~~------~~~~~~l~~~~~~LkpgG~lils~~~------------------------~~~~~~v~~~l~~~Gf~~~~~~ 242 (254)
T 2nxc_A 193 YA------ELHAALAPRYREALVPGGRALLTGIL------------------------KDRAPLVREAMAGAGFRPLEEA 242 (254)
T ss_dssp CH------HHHHHHHHHHHHHEEEEEEEEEEEEE------------------------GGGHHHHHHHHHHTTCEEEEEE
T ss_pred cH------HHHHHHHHHHHHHcCCCCEEEEEeec------------------------cCCHHHHHHHHHHCCCEEEEEe
Confidence 43 23458999999999999988884111 012478889999999987554
Q ss_pred --cceEEEEec
Q 030558 166 --GSRVYCIKL 174 (175)
Q Consensus 166 --~~~~~~i~~ 174 (175)
+++..++.+
T Consensus 243 ~~~~W~~l~~~ 253 (254)
T 2nxc_A 243 AEGEWVLLAYG 253 (254)
T ss_dssp EETTEEEEEEE
T ss_pred ccCCeEEEEEE
Confidence 445444443
No 92
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.70 E-value=1.1e-17 Score=119.34 Aligned_cols=142 Identities=15% Similarity=0.174 Sum_probs=93.2
Q ss_pred CCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCCc
Q 030558 8 ERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASDI 87 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~~ 87 (175)
++++|||+|||+|.++..+++. +++|+|+.++ +.++.+ + +..+..+. ..+++.+++||+|++..+
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~-~~a~~~----~----~~~~~~d~-~~~~~~~~~fD~v~~~~~ 111 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMA-EIARKR----G----VFVLKGTA-ENLPLKDESFDFALMVTT 111 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTCC-----EEEESCHHHH-HHHHHT----T----CEEEECBT-TBCCSCTTCEEEEEEESC
T ss_pred CCCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHH-HHHHhc----C----CEEEEccc-ccCCCCCCCeeEEEEcch
Confidence 4789999999999999888553 9999999998 555543 1 23333333 234566779999999999
Q ss_pred ccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCeeEEecc
Q 030558 88 LLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVKHLGS 167 (175)
Q Consensus 88 l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 167 (175)
+++.. +...+++++.++|+|||.+++..+................. .+.......+...+.++++++||++.++.+
T Consensus 112 l~~~~---~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~ 187 (219)
T 1vlm_A 112 ICFVD---DPERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKS-VFYKNARFFSTEELMDLMRKAGFEEFKVVQ 187 (219)
T ss_dssp GGGSS---CHHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC--CCSTTCCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred Hhhcc---CHHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCc-chhcccccCCHHHHHHHHHHCCCeEEEEec
Confidence 85554 45599999999999999999975443211100000000000 000011112358999999999999887754
Q ss_pred e
Q 030558 168 R 168 (175)
Q Consensus 168 ~ 168 (175)
.
T Consensus 188 ~ 188 (219)
T 1vlm_A 188 T 188 (219)
T ss_dssp E
T ss_pred c
Confidence 3
No 93
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.70 E-value=1.3e-16 Score=114.36 Aligned_cols=107 Identities=9% Similarity=-0.049 Sum_probs=79.2
Q ss_pred CCccccCCCcEEEeCCCccHHHHHHHHhCC--CcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCC--CCCCCCC
Q 030558 2 HHREWIERRRCIELGSGTGALAIFLRKAMN--LDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGD--AFPIPNP 77 (175)
Q Consensus 2 ~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~--~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 77 (175)
++..+.+|.+|||+|||+|.++..+|+..| .+|+|+|+++.|+ +.+.++.... .++..+..+..+ ..+...+
T Consensus 71 ~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~-~~l~~~a~~~---~ni~~V~~d~~~p~~~~~~~~ 146 (233)
T 4df3_A 71 IELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVM-RDLLTVVRDR---RNIFPILGDARFPEKYRHLVE 146 (233)
T ss_dssp SCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHH-HHHHHHSTTC---TTEEEEESCTTCGGGGTTTCC
T ss_pred hhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHH-HHHHHhhHhh---cCeeEEEEeccCccccccccc
Confidence 455678899999999999999999998765 4699999999998 5555444331 234555555443 2345667
Q ss_pred CccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 78 DWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 78 ~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
++|+|++.... .++...++.++.+.|||||+++++
T Consensus 147 ~vDvVf~d~~~-----~~~~~~~l~~~~r~LKpGG~lvI~ 181 (233)
T 4df3_A 147 GVDGLYADVAQ-----PEQAAIVVRNARFFLRDGGYMLMA 181 (233)
T ss_dssp CEEEEEECCCC-----TTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEEEEeccC-----ChhHHHHHHHHHHhccCCCEEEEE
Confidence 89999864322 335568999999999999999885
No 94
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.70 E-value=1.6e-17 Score=119.12 Aligned_cols=149 Identities=15% Similarity=0.048 Sum_probs=83.4
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCC-hHHHHHHH---HHHHhhCCCCCCcceeeccCCCCCCCCCCCccE
Q 030558 7 IERRRCIELGSGTGALAIFLRKAM-NLDITTSDYN-DQEIEDNI---AYNSTTNGITPALPHIKHSWGDAFPIPNPDWDL 81 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s-~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~ 81 (175)
.++.+|||||||+|.++..+++.. +.+|+|+|+| +.|+ +.+ +++....+. +.+.+..++...++...||.
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml-~~A~~A~~~~~~~~~----~~v~~~~~d~~~l~~~~~d~ 97 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLF-DISKKIIKKPSKGGL----SNVVFVIAAAESLPFELKNI 97 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGH-HHHHHHTSCGGGTCC----SSEEEECCBTTBCCGGGTTC
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHH-HHHHHHHHHHHHcCC----CCeEEEEcCHHHhhhhccCe
Confidence 357889999999999999998643 6789999999 6676 444 444444444 23444444333332223344
Q ss_pred EEeCCcccCcccc-----hHHHHHHHHHHhhcCCCCceeeccccCCCCC-CCC-CCCCCceEeeeeccCCCcchhHHHHH
Q 030558 82 ILASDILLYVKQY-----SNLIKSLSVLLKSYKPKDSQVGHLTKNEQGE-GTE-GLPWPAFLMSWRRRIGKEDETIFFTS 154 (175)
Q Consensus 82 i~~~~~l~~~~~~-----~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (175)
|.+..+.+.++.. .+...+++++.++|||||++++......... ..+ ....+. +...+.. ..++.+.
T Consensus 98 v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~~~~~----~~~~~~~--~~el~~~ 171 (225)
T 3p2e_A 98 ADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEEAEIKKRGLPL----LSKAYFL--SEQYKAE 171 (225)
T ss_dssp EEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC------------------CCHHHHH--SHHHHHH
T ss_pred EEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchhchhhhcCCCC----CChhhcc--hHHHHHH
Confidence 4433333222221 1124789999999999999998421111100 000 000010 0111111 1358889
Q ss_pred HHHcCCeeEEec
Q 030558 155 CENAGLEVKHLG 166 (175)
Q Consensus 155 ~~~~g~~~~~~~ 166 (175)
++++||++....
T Consensus 172 l~~aGf~v~~~~ 183 (225)
T 3p2e_A 172 LSNSGFRIDDVK 183 (225)
T ss_dssp HHHHTCEEEEEE
T ss_pred HHHcCCCeeeee
Confidence 999999987764
No 95
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.70 E-value=1.3e-16 Score=120.93 Aligned_cols=109 Identities=18% Similarity=0.161 Sum_probs=84.1
Q ss_pred cccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEe
Q 030558 5 EWIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILA 84 (175)
Q Consensus 5 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~ 84 (175)
...++++|||||||+|.++..+++....+|+|+|+|+ ++ +.++++...++...++..+..+.. ..++++++||+|++
T Consensus 61 ~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~-~~a~~~~~~~~~~~~i~~~~~d~~-~~~~~~~~~D~Ivs 137 (340)
T 2fyt_A 61 HIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-IL-YQAMDIIRLNKLEDTITLIKGKIE-EVHLPVEKVDVIIS 137 (340)
T ss_dssp GGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HH-HHHHHHHHHTTCTTTEEEEESCTT-TSCCSCSCEEEEEE
T ss_pred hhcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HH-HHHHHHHHHcCCCCcEEEEEeeHH-HhcCCCCcEEEEEE
Confidence 3567889999999999999999987445899999997 87 777778777776445555544443 33555679999999
Q ss_pred CCcccCcccchHHHHHHHHHHhhcCCCCceee
Q 030558 85 SDILLYVKQYSNLIKSLSVLLKSYKPKDSQVG 116 (175)
Q Consensus 85 ~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~ 116 (175)
..+.+.......+..++.++.++|||||.++.
T Consensus 138 ~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 169 (340)
T 2fyt_A 138 EWMGYFLLFESMLDSVLYAKNKYLAKGGSVYP 169 (340)
T ss_dssp CCCBTTBTTTCHHHHHHHHHHHHEEEEEEEES
T ss_pred cCchhhccCHHHHHHHHHHHHhhcCCCcEEEc
Confidence 87554445455667899999999999998873
No 96
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.70 E-value=6.6e-17 Score=120.42 Aligned_cols=105 Identities=14% Similarity=0.135 Sum_probs=80.3
Q ss_pred CCCcEEEeCCCccHHHHHHHHh--CCCcEEEEeCChHHHHHHHHHHHhhC-CCCCCcceeeccCCCCCCCCC------CC
Q 030558 8 ERRRCIELGSGTGALAIFLRKA--MNLDITTSDYNDQEIEDNIAYNSTTN-GITPALPHIKHSWGDAFPIPN------PD 78 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~--~~~~v~~~D~s~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~------~~ 78 (175)
++.+|||||||+|..+..+++. .+.+|+|+|+|+.++ +.++++.... +...++..+..+.. .+++.+ ++
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~-~~a~~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~~~~~~~ 113 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMI-KTAEVIKEGSPDTYKNVSFKISSSD-DFKFLGADSVDKQK 113 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHH-HHHHHHHHHCC-CCTTEEEEECCTT-CCGGGCTTTTTSSC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHH-HHHHHHHHhccCCCCceEEEEcCHH-hCCccccccccCCC
Confidence 6789999999999999999974 378899999999998 6776666654 22234444444433 233344 79
Q ss_pred ccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeecc
Q 030558 79 WDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHL 118 (175)
Q Consensus 79 fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~ 118 (175)
||+|+++.++++. ++..+++++.++|+|||.+++..
T Consensus 114 fD~V~~~~~l~~~----~~~~~l~~~~~~LkpgG~l~i~~ 149 (299)
T 3g5t_A 114 IDMITAVECAHWF----DFEKFQRSAYANLRKDGTIAIWG 149 (299)
T ss_dssp EEEEEEESCGGGS----CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeEEeHhhHHHHh----CHHHHHHHHHHhcCCCcEEEEEe
Confidence 9999999998555 45599999999999999998853
No 97
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.69 E-value=4.4e-17 Score=124.85 Aligned_cols=154 Identities=13% Similarity=0.149 Sum_probs=101.2
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEe
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILA 84 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~ 84 (175)
..++.+|||+|||+|.++..+++.. +.+++++|+ +.++ +.++++....+...++..+..+..+.++ ..||+|++
T Consensus 180 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~~---~~~D~v~~ 254 (374)
T 1qzz_A 180 WSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPA-ERARRRFADAGLADRVTVAEGDFFKPLP---VTADVVLL 254 (374)
T ss_dssp CTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHH-HHHHHHHHHTTCTTTEEEEECCTTSCCS---CCEEEEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHH-HHHHHHHHhcCCCCceEEEeCCCCCcCC---CCCCEEEE
Confidence 3457899999999999999998875 568999999 9898 7777777766664455555555433222 34999999
Q ss_pred CCcccCcccchHHHHHHHHHHhhcCCCCceeeccc--cCCCCCCCCCCC-CCceEeeeeccCCCcchhHHHHHHHHcCCe
Q 030558 85 SDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLT--KNEQGEGTEGLP-WPAFLMSWRRRIGKEDETIFFTSCENAGLE 161 (175)
Q Consensus 85 ~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 161 (175)
.++++++. .+....+++++.++|+|||++++... ............ ...+...... ....+..++.++++++||+
T Consensus 255 ~~vl~~~~-~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ll~~aGf~ 332 (374)
T 1qzz_A 255 SFVLLNWS-DEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMG-GRVRTRDEVVDLAGSAGLA 332 (374)
T ss_dssp ESCGGGSC-HHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHS-CCCCCHHHHHHHHHTTTEE
T ss_pred eccccCCC-HHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCC-CcCCCHHHHHHHHHHCCCc
Confidence 99995554 34456899999999999999988755 221110000000 0000000000 1112458999999999998
Q ss_pred eEEec
Q 030558 162 VKHLG 166 (175)
Q Consensus 162 ~~~~~ 166 (175)
+.++.
T Consensus 333 ~~~~~ 337 (374)
T 1qzz_A 333 LASER 337 (374)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 77653
No 98
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.69 E-value=2.8e-16 Score=107.93 Aligned_cols=121 Identities=13% Similarity=0.141 Sum_probs=86.2
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASD 86 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~ 86 (175)
.++++|||+|||+|.++..+++. + +|+|+|+|+.|+ +. . .++..+..+..+ +..+++||+|+++.
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~-~-~v~gvD~s~~~~-~~------~----~~~~~~~~d~~~--~~~~~~fD~i~~n~ 86 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKR-N-TVVSTDLNIRAL-ES------H----RGGNLVRADLLC--SINQESVDVVVFNP 86 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTT-S-EEEEEESCHHHH-HT------C----SSSCEEECSTTT--TBCGGGCSEEEECC
T ss_pred CCCCeEEEeccCccHHHHHHHhc-C-cEEEEECCHHHH-hc------c----cCCeEEECChhh--hcccCCCCEEEECC
Confidence 46789999999999999999887 4 999999999998 33 1 123344444333 34457999999987
Q ss_pred cccCcccc------hHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCC
Q 030558 87 ILLYVKQY------SNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGL 160 (175)
Q Consensus 87 ~l~~~~~~------~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 160 (175)
.++...+. .+...+++++.+.+ |||.+++..... .....+.+.++++||
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~------------------------~~~~~l~~~l~~~gf 141 (170)
T 3q87_B 87 PYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA------------------------NRPKEVLARLEERGY 141 (170)
T ss_dssp CCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG------------------------GCHHHHHHHHHHTTC
T ss_pred CCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecC------------------------CCHHHHHHHHHHCCC
Confidence 76332211 12347888899888 999888852111 124788899999999
Q ss_pred eeEEecc
Q 030558 161 EVKHLGS 167 (175)
Q Consensus 161 ~~~~~~~ 167 (175)
++..+..
T Consensus 142 ~~~~~~~ 148 (170)
T 3q87_B 142 GTRILKV 148 (170)
T ss_dssp EEEEEEE
T ss_pred cEEEEEe
Confidence 9777743
No 99
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.69 E-value=5.5e-17 Score=122.50 Aligned_cols=155 Identities=14% Similarity=0.150 Sum_probs=101.4
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILAS 85 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~ 85 (175)
.++.+|||+|||+|..+..+++.. +.+++++|++ .++ +.++++....+...++..+..+..+. +++ +.||+|++.
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~-~~~D~v~~~ 239 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVL-EVAKENARIQGVASRYHTIAGSAFEV-DYG-NDYDLVLLP 239 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHH-HHHHHHHHHHTCGGGEEEEESCTTTS-CCC-SCEEEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHH-HHHHHHHHhcCCCcceEEEecccccC-CCC-CCCcEEEEc
Confidence 457899999999999999998875 5689999999 888 67776666555433344444443322 333 349999999
Q ss_pred CcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCC-CCCC-CCceEeeeeccCCCcchhHHHHHHHHcCCeeE
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGT-EGLP-WPAFLMSWRRRIGKEDETIFFTSCENAGLEVK 163 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 163 (175)
++++++. .++...+++++.++|+|||++++........... .... ...+...........+.+++.++++++||++.
T Consensus 240 ~~l~~~~-~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~~ 318 (335)
T 2r3s_A 240 NFLHHFD-VATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSHS 318 (335)
T ss_dssp SCGGGSC-HHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSEE
T ss_pred chhccCC-HHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCee
Confidence 9995553 4566799999999999999988875443221100 0000 00000000001111246899999999999877
Q ss_pred Eec
Q 030558 164 HLG 166 (175)
Q Consensus 164 ~~~ 166 (175)
++.
T Consensus 319 ~~~ 321 (335)
T 2r3s_A 319 QLH 321 (335)
T ss_dssp EEE
T ss_pred eEE
Confidence 653
No 100
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.69 E-value=4e-16 Score=119.06 Aligned_cols=155 Identities=14% Similarity=0.138 Sum_probs=101.9
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEe
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILA 84 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~ 84 (175)
..++.+|||||||+|.++..+++.. +.+++++|+ +.++ +.++++....+...++..+..+..+. ++ ..+|+|++
T Consensus 188 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~-~~--~~~D~v~~ 262 (359)
T 1x19_A 188 LDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAI-DLVNENAAEKGVADRMRGIAVDIYKE-SY--PEADAVLF 262 (359)
T ss_dssp CTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGH-HHHHHHHHHTTCTTTEEEEECCTTTS-CC--CCCSEEEE
T ss_pred CCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHH-HHHHHHHHhcCCCCCEEEEeCccccC-CC--CCCCEEEE
Confidence 3467899999999999999998875 568999999 9898 77777777666544455554444332 33 23499999
Q ss_pred CCcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeee--ecc-CCCcchhHHHHHHHHcCCe
Q 030558 85 SDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSW--RRR-IGKEDETIFFTSCENAGLE 161 (175)
Q Consensus 85 ~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~g~~ 161 (175)
..+++++. .++...+++++.++|+|||++++..................+.... .+. ....+.+++.++++++||+
T Consensus 263 ~~vlh~~~-d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~~ll~~aGf~ 341 (359)
T 1x19_A 263 CRILYSAN-EQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARYKEILESLGYK 341 (359)
T ss_dssp ESCGGGSC-HHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHHHHHHHHTCE
T ss_pred echhccCC-HHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHHHHHHHHCCCc
Confidence 99996554 3457799999999999999998875433221100000000000000 000 0002458999999999998
Q ss_pred eEEec
Q 030558 162 VKHLG 166 (175)
Q Consensus 162 ~~~~~ 166 (175)
+.++.
T Consensus 342 ~v~~~ 346 (359)
T 1x19_A 342 DVTMV 346 (359)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 76654
No 101
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.69 E-value=3.6e-17 Score=112.93 Aligned_cols=101 Identities=11% Similarity=0.136 Sum_probs=77.3
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCC-CCCCCCccEEEe
Q 030558 7 IERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAF-PIPNPDWDLILA 84 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~fD~i~~ 84 (175)
.+..+|||||||+|.+++.++... +.+|+|+|+|+.|+ +.++++...++...+ +.+ .+.. ....++||+|++
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~l-eiar~~~~~~g~~~~---v~~--~d~~~~~~~~~~DvVLa 121 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEI-AFLSSIIGKLKTTIK---YRF--LNKESDVYKGTYDVVFL 121 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHH-HHHHHHHHHSCCSSE---EEE--ECCHHHHTTSEEEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHH-HHHHHHHHhcCCCcc---EEE--ecccccCCCCCcChhhH
Confidence 347899999999999999996653 55899999999998 888888888777322 222 1221 234578999999
Q ss_pred CCcccCcccchHHHHHHHHHHhhcCCCCceee
Q 030558 85 SDILLYVKQYSNLIKSLSVLLKSYKPKDSQVG 116 (175)
Q Consensus 85 ~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~ 116 (175)
..++++. ++...++.++++.|+|||.++-
T Consensus 122 ~k~LHlL---~~~~~al~~v~~~L~pggvfIS 150 (200)
T 3fzg_A 122 LKMLPVL---KQQDVNILDFLQLFHTQNFVIS 150 (200)
T ss_dssp ETCHHHH---HHTTCCHHHHHHTCEEEEEEEE
T ss_pred hhHHHhh---hhhHHHHHHHHHHhCCCCEEEE
Confidence 9999444 4555888899999999995555
No 102
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.69 E-value=8.9e-17 Score=113.33 Aligned_cols=109 Identities=16% Similarity=0.152 Sum_probs=79.5
Q ss_pred CCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCC-CCcceeeccCCCCCC-CCCCC-ccEEEe
Q 030558 8 ERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGIT-PALPHIKHSWGDAFP-IPNPD-WDLILA 84 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~-fD~i~~ 84 (175)
++.+|||+|||+|.+++.+++....+|+++|+|+.++ +.++++...++.. .++..+..+..+..+ ..+++ ||+|++
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l-~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 131 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVA-NQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFL 131 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHH-HHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHH-HHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEE
Confidence 6789999999999999987777456899999999998 7888888776652 233333333222222 23568 999999
Q ss_pred CCcccCcccchHHHHHHHHH--HhhcCCCCceeeccccC
Q 030558 85 SDILLYVKQYSNLIKSLSVL--LKSYKPKDSQVGHLTKN 121 (175)
Q Consensus 85 ~~~l~~~~~~~~~~~~l~~l--~~~l~pgG~~~~~~~~~ 121 (175)
...+ +. .....+++.+ .++|+|||.+++.....
T Consensus 132 ~~~~-~~---~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 132 DPPF-HF---NLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp CCCS-SS---CHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred CCCC-CC---ccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 8774 43 3455788888 66899999998875443
No 103
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.69 E-value=1.2e-16 Score=122.70 Aligned_cols=110 Identities=18% Similarity=0.246 Sum_probs=85.8
Q ss_pred ccccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEE
Q 030558 4 REWIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLIL 83 (175)
Q Consensus 4 ~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~ 83 (175)
....++++|||||||+|.+++.+++.+..+|+|+|+| .|+ +.++++...++...++..+..+..+ .+++ ++||+|+
T Consensus 59 ~~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~-~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~~D~Iv 134 (376)
T 3r0q_C 59 KHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMA-DHARALVKANNLDHIVEVIEGSVED-ISLP-EKVDVII 134 (376)
T ss_dssp TTTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTH-HHHHHHHHHTTCTTTEEEEESCGGG-CCCS-SCEEEEE
T ss_pred cccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHH-HHHHHHHHHcCCCCeEEEEECchhh-cCcC-CcceEEE
Confidence 3456789999999999999999999844589999999 898 7778888887775445555544432 2333 7899999
Q ss_pred eCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 84 ASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 84 ~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
+..+.++......+..+++++.+.|+|||.+++.
T Consensus 135 ~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 135 SEWMGYFLLRESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp ECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred EcChhhcccchHHHHHHHHHHHhhCCCCeEEEEe
Confidence 9776655554456778999999999999988876
No 104
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.69 E-value=6.3e-17 Score=121.28 Aligned_cols=112 Identities=13% Similarity=0.158 Sum_probs=81.0
Q ss_pred CCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCC------CCCCcceeeccCCCCC---CC--CC
Q 030558 8 ERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNG------ITPALPHIKHSWGDAF---PI--PN 76 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~---~~--~~ 76 (175)
++.+|||+|||+|.++..+++..+.+|+++|+|+.++ +.++++..... ....+..+..+..+.. ++ .+
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l-~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSV-KQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHH-HHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHH-HHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 5789999999999999999876577899999999998 55554443321 1112333333333221 13 34
Q ss_pred CCccEEEeCCcccCc-ccchHHHHHHHHHHhhcCCCCceeecccc
Q 030558 77 PDWDLILASDILLYV-KQYSNLIKSLSVLLKSYKPKDSQVGHLTK 120 (175)
Q Consensus 77 ~~fD~i~~~~~l~~~-~~~~~~~~~l~~l~~~l~pgG~~~~~~~~ 120 (175)
++||+|+++.++++. .+.++...+++++.++|+|||.+++.++.
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred CCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 589999999998555 45567789999999999999999998553
No 105
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.69 E-value=5.6e-16 Score=110.09 Aligned_cols=108 Identities=13% Similarity=0.114 Sum_probs=78.5
Q ss_pred CCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCC--CCCCCccEEEe
Q 030558 8 ERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFP--IPNPDWDLILA 84 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~fD~i~~ 84 (175)
++.+|||||||+|.++..+++.. +.+|+|+|+|+.++ +.++++....+. .++..+..+..+ ++ +.+++||+|++
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l-~~a~~~~~~~~~-~~v~~~~~d~~~-~~~~~~~~~~D~i~~ 117 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVL-SYALDKVLEVGV-PNIKLLWVDGSD-LTDYFEDGEIDRLYL 117 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHH-HHHHHHHHHHCC-SSEEEEECCSSC-GGGTSCTTCCSEEEE
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHH-HHHHHHHHHcCC-CCEEEEeCCHHH-HHhhcCCCCCCEEEE
Confidence 36889999999999999998875 56899999999998 777777766555 344444444433 22 45678999999
Q ss_pred CCcccCcccc-----hHHHHHHHHHHhhcCCCCceeecc
Q 030558 85 SDILLYVKQY-----SNLIKSLSVLLKSYKPKDSQVGHL 118 (175)
Q Consensus 85 ~~~l~~~~~~-----~~~~~~l~~l~~~l~pgG~~~~~~ 118 (175)
+....+.... .....+++++.++|+|||.+++.+
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (214)
T 1yzh_A 118 NFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKT 156 (214)
T ss_dssp ESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred ECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEe
Confidence 7553111000 012479999999999999988863
No 106
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.68 E-value=4e-17 Score=116.21 Aligned_cols=151 Identities=12% Similarity=0.042 Sum_probs=88.3
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHH---HHhhCCCCCCcceeeccCCCCCCCCCCCccE
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAY---NSTTNGITPALPHIKHSWGDAFPIPNPDWDL 81 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~ 81 (175)
..++.+|||+|||+|.++..+++.. +.+|+|+|+|+.|++..++. +....+. .++..+..+.. .+++.+++ |.
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~-~~v~~~~~d~~-~l~~~~~~-d~ 101 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGL-PNLLYLWATAE-RLPPLSGV-GE 101 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCC-TTEEEEECCST-TCCSCCCE-EE
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCC-CceEEEecchh-hCCCCCCC-CE
Confidence 3467899999999999999999876 67899999999998333322 2222232 22333333332 24555555 77
Q ss_pred EEeCCcccCcc--cchHHHHHHHHHHhhcCCCCceeeccccCCCCC-CCCCCCCCceEeeeeccCCCcchhHHHHHHHHc
Q 030558 82 ILASDILLYVK--QYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGE-GTEGLPWPAFLMSWRRRIGKEDETIFFTSCENA 158 (175)
Q Consensus 82 i~~~~~l~~~~--~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (175)
|.......... ..++...+++++.++|||||.+++......... .......+.. ...+ ....+.+.++++
T Consensus 102 v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~----~~~~---~~~~l~~~l~~a 174 (218)
T 3mq2_A 102 LHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEP----TPDS---ADEWLAPRYAEA 174 (218)
T ss_dssp EEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCC----CHHH---HHHHHHHHHHHT
T ss_pred EEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCcc----chHH---HHHHHHHHHHHc
Confidence 76432211100 122235999999999999999998632211110 0000000000 0000 124578889999
Q ss_pred CCeeEEec
Q 030558 159 GLEVKHLG 166 (175)
Q Consensus 159 g~~~~~~~ 166 (175)
||++.++.
T Consensus 175 Gf~i~~~~ 182 (218)
T 3mq2_A 175 GWKLADCR 182 (218)
T ss_dssp TEEEEEEE
T ss_pred CCCceeee
Confidence 99987764
No 107
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.68 E-value=1.1e-16 Score=122.04 Aligned_cols=154 Identities=15% Similarity=0.175 Sum_probs=102.1
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILAS 85 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~ 85 (175)
.++.+|||+|||+|.++..+++.. +.+++++|+ +.++ +.++++....+...++..+..+..+..+ ..||+|++.
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~~---~~~D~v~~~ 256 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTV-DTARSYLKDEGLSDRVDVVEGDFFEPLP---RKADAIILS 256 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHH-HHHHHHHHHTTCTTTEEEEECCTTSCCS---SCEEEEEEE
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHH-HHHHHHHHhcCCCCceEEEeCCCCCCCC---CCccEEEEc
Confidence 457899999999999999998875 567999999 8887 7777777766664455555555443222 359999999
Q ss_pred CcccCcccchHHHHHHHHHHhhcCCCCceeecccc-CCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCeeEE
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTK-NEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVKH 164 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 164 (175)
.+++++. .++...+++++.++|+|||++++.... ..........................+.+++.++++++||++.+
T Consensus 257 ~vl~~~~-~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 335 (360)
T 1tw3_A 257 FVLLNWP-DHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLVVEE 335 (360)
T ss_dssp SCGGGSC-HHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEE
T ss_pred ccccCCC-HHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeEEE
Confidence 9995554 344568999999999999999987544 22111000000000000000001112468999999999998776
Q ss_pred ec
Q 030558 165 LG 166 (175)
Q Consensus 165 ~~ 166 (175)
+.
T Consensus 336 ~~ 337 (360)
T 1tw3_A 336 VR 337 (360)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 108
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.68 E-value=9e-17 Score=121.43 Aligned_cols=150 Identities=11% Similarity=0.031 Sum_probs=98.5
Q ss_pred CcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCCcc
Q 030558 10 RRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASDIL 88 (175)
Q Consensus 10 ~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~~l 88 (175)
.+|||+|||+|..+..+++.. +.+++++|+ +.++ +.++++....+...++..+..+..+ +. +++||+|++..++
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~--~~-~~~~D~v~~~~vl 243 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSL-GVARDNLSSLLAGERVSLVGGDMLQ--EV-PSNGDIYLLSRII 243 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCT-HHHHHHTHHHHHTTSEEEEESCTTT--CC-CSSCSEEEEESCG
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHH-HHHHHHHhhcCCCCcEEEecCCCCC--CC-CCCCCEEEEchhc
Confidence 799999999999999998875 568999999 8887 6666555443333344555544433 22 3679999999999
Q ss_pred cCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCeeEEe
Q 030558 89 LYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVKHL 165 (175)
Q Consensus 89 ~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 165 (175)
+++. .+....+++++.++|+|||++++..................+...........+..++.++++++||++.++
T Consensus 244 ~~~~-~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 319 (334)
T 2ip2_A 244 GDLD-EAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVERI 319 (334)
T ss_dssp GGCC-HHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEE
T ss_pred cCCC-HHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCCceeEE
Confidence 5554 455679999999999999999988443322111000000000000000011124689999999999987665
No 109
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.68 E-value=1.4e-16 Score=112.75 Aligned_cols=110 Identities=17% Similarity=0.210 Sum_probs=81.1
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASD 86 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~ 86 (175)
.++.+|||+|||+|.++..+++....+|+++|+|+.++ +.++++... . ..+..+..+.. .+++.+++||+|++..
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~-~~a~~~~~~--~-~~i~~~~~d~~-~~~~~~~~fD~v~~~~ 115 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVV-AAMQACYAH--V-PQLRWETMDVR-KLDFPSASFDVVLEKG 115 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHH-HHHHHHTTT--C-TTCEEEECCTT-SCCSCSSCEEEEEEES
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHH-HHHHHhccc--C-CCcEEEEcchh-cCCCCCCcccEEEECc
Confidence 46789999999999999999887434899999999998 666655442 1 22333433332 2356677999999988
Q ss_pred cccCcc------------cchHHHHHHHHHHhhcCCCCceeeccccC
Q 030558 87 ILLYVK------------QYSNLIKSLSVLLKSYKPKDSQVGHLTKN 121 (175)
Q Consensus 87 ~l~~~~------------~~~~~~~~l~~l~~~l~pgG~~~~~~~~~ 121 (175)
++.+.. ...+...+++++.++|+|||++++..+..
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 116 TLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp HHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred chhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 773332 23466799999999999999999875543
No 110
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.68 E-value=1.1e-16 Score=112.13 Aligned_cols=112 Identities=15% Similarity=0.074 Sum_probs=81.6
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhC--CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEE
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAM--NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLIL 83 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~ 83 (175)
..++++|||+|||+|..+..+++.. ..+|+++|+++.++ +.++++....+...++..+..+..+.....+++||+|+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~ 98 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAI-ANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVM 98 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHH-HHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHH-HHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEE
Confidence 3467899999999999999998874 36899999999998 77787877765533344444333223224557999999
Q ss_pred eCCcccC------cccchHHHHHHHHHHhhcCCCCceeecc
Q 030558 84 ASDILLY------VKQYSNLIKSLSVLLKSYKPKDSQVGHL 118 (175)
Q Consensus 84 ~~~~l~~------~~~~~~~~~~l~~l~~~l~pgG~~~~~~ 118 (175)
+...++. .....+...+++++.++|+|||++++..
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 139 (197)
T 3eey_A 99 FNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVI 139 (197)
T ss_dssp EEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEE
Confidence 8765411 1112345689999999999999998864
No 111
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.68 E-value=2.7e-16 Score=111.64 Aligned_cols=102 Identities=17% Similarity=0.079 Sum_probs=68.7
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCC---CCCCCCCccE
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDA---FPIPNPDWDL 81 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~fD~ 81 (175)
..++.+|||+|||+|..+..+++.. ..+|+|+|+|+.|++...+...... ++..+..+..+. .++ .++||+
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~----~v~~~~~d~~~~~~~~~~-~~~fD~ 129 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERN----NIIPLLFDASKPWKYSGI-VEKVDL 129 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCS----SEEEECSCTTCGGGTTTT-CCCEEE
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCC----CeEEEEcCCCCchhhccc-ccceeE
Confidence 3468899999999999999998875 3579999999998733333222221 122222222221 222 378999
Q ss_pred EEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 82 ILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 82 i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
|++.. . ...+...+++++.++|||||++++.
T Consensus 130 V~~~~-~----~~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 130 IYQDI-A----QKNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp EEECC-C----STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEec-c----ChhHHHHHHHHHHHHhCCCCEEEEE
Confidence 99872 1 1233445699999999999999886
No 112
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.68 E-value=7.4e-16 Score=109.90 Aligned_cols=132 Identities=13% Similarity=0.097 Sum_probs=97.4
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCC-CccEEEe
Q 030558 7 IERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNP-DWDLILA 84 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~fD~i~~ 84 (175)
.++.+|||||||+|.+++.+++.. ..+|+|+|+++.++ +.+++|...+++..++.....+..+.+ +.+ .||+|+.
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al-~~A~~N~~~~gl~~~i~~~~~d~l~~l--~~~~~~D~Ivi 90 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPY-QSAVKNVEAHGLKEKIQVRLANGLAAF--EETDQVSVITI 90 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHH-HHHHHHHHHTTCTTTEEEEECSGGGGC--CGGGCCCEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHH-HHHHHHHHHcCCCceEEEEECchhhhc--ccCcCCCEEEE
Confidence 357899999999999999999974 45799999999998 889999999888544444443333222 323 6999887
Q ss_pred CCcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCeeEE
Q 030558 85 SDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVKH 164 (175)
Q Consensus 85 ~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 164 (175)
..+- -..+..++.+..+.|+|+|++++. +. .....+.+.+.+.||.+.+
T Consensus 91 aG~G-----g~~i~~Il~~~~~~L~~~~~lVlq---------------~~-----------~~~~~vr~~L~~~Gf~i~~ 139 (225)
T 3kr9_A 91 AGMG-----GRLIARILEEGLGKLANVERLILQ---------------PN-----------NREDDLRIWLQDHGFQIVA 139 (225)
T ss_dssp EEEC-----HHHHHHHHHHTGGGCTTCCEEEEE---------------ES-----------SCHHHHHHHHHHTTEEEEE
T ss_pred cCCC-----hHHHHHHHHHHHHHhCCCCEEEEE---------------CC-----------CCHHHHHHHHHHCCCEEEE
Confidence 6553 223568899999999999987773 00 1247888999999998665
Q ss_pred e-----cceEEEE
Q 030558 165 L-----GSRVYCI 172 (175)
Q Consensus 165 ~-----~~~~~~i 172 (175)
- ..+.|.|
T Consensus 140 e~lv~e~~~~Yei 152 (225)
T 3kr9_A 140 ESILEEAGKFYEI 152 (225)
T ss_dssp EEEEEETTEEEEE
T ss_pred EEEEEECCEEEEE
Confidence 4 5566654
No 113
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.67 E-value=9.2e-17 Score=122.14 Aligned_cols=152 Identities=11% Similarity=0.096 Sum_probs=93.4
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEe
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILA 84 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~ 84 (175)
..++.+|||||||+|..+..+++.. +.+++++|++ .++ . +.+....+...++..+..+..+ +.+ +||+|++
T Consensus 182 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~-~--~~~~~~~~~~~~v~~~~~d~~~--~~p--~~D~v~~ 253 (348)
T 3lst_A 182 FPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRA-EVV-A--RHRLDAPDVAGRWKVVEGDFLR--EVP--HADVHVL 253 (348)
T ss_dssp CCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECH-HHH-T--TCCCCCGGGTTSEEEEECCTTT--CCC--CCSEEEE
T ss_pred ccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCH-HHh-h--cccccccCCCCCeEEEecCCCC--CCC--CCcEEEE
Confidence 3457899999999999999998865 5578999994 444 2 2222222222233444333322 222 8999999
Q ss_pred CCcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCeeEE
Q 030558 85 SDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVKH 164 (175)
Q Consensus 85 ~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 164 (175)
..+++++. .++...++++++++|||||++++..................+...........+.+++.++++++||++.+
T Consensus 254 ~~vlh~~~-d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 332 (348)
T 3lst_A 254 KRILHNWG-DEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGLRLDR 332 (348)
T ss_dssp ESCGGGSC-HHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEEEEE
T ss_pred ehhccCCC-HHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCceEE
Confidence 99996655 44457999999999999999998744332221100000000000000001112468999999999999777
Q ss_pred ec
Q 030558 165 LG 166 (175)
Q Consensus 165 ~~ 166 (175)
+.
T Consensus 333 ~~ 334 (348)
T 3lst_A 333 VV 334 (348)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 114
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.67 E-value=2.9e-17 Score=113.32 Aligned_cols=111 Identities=15% Similarity=0.122 Sum_probs=79.6
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeC
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILAS 85 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~ 85 (175)
..++++|||+|||+|.++..+++....+|+++|+|+.++ +.++++....+...++..+..+..+..+..+++||+|++.
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~-~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~ 107 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQ-AIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLD 107 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHH-HHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEEC
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHH-HHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEEC
Confidence 346789999999999999999887456899999999998 7888888776653233333333222222234679999998
Q ss_pred CcccCcccchHHHHHHHHHH--hhcCCCCceeeccccC
Q 030558 86 DILLYVKQYSNLIKSLSVLL--KSYKPKDSQVGHLTKN 121 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~--~~l~pgG~~~~~~~~~ 121 (175)
..+ +. .....+++.+. ++|+|||.+++.....
T Consensus 108 ~~~-~~---~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 108 PPY-AK---ETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp CSS-HH---HHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred CCC-Cc---chHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 764 22 23446777776 9999999999875443
No 115
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.67 E-value=1e-16 Score=115.87 Aligned_cols=127 Identities=14% Similarity=0.138 Sum_probs=89.5
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCC---CCCCccEE
Q 030558 7 IERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPI---PNPDWDLI 82 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~fD~i 82 (175)
.++.+|||+|||+|..+..++... +.+|+++|+|+.++ +.++++....+.. .+..+..+..+ ++. .+++||+|
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~-~~a~~~~~~~~~~-~v~~~~~d~~~-~~~~~~~~~~fD~V 145 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRI-TFLEKLSEALQLE-NTTFCHDRAET-FGQRKDVRESYDIV 145 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHH-HHHHHHHHHHTCS-SEEEEESCHHH-HTTCTTTTTCEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHH-HHHHHHHHHcCCC-CEEEEeccHHH-hcccccccCCccEE
Confidence 367899999999999999998643 67899999999998 7777777766652 23333332211 222 25689999
Q ss_pred EeCCcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCee
Q 030558 83 LASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEV 162 (175)
Q Consensus 83 ~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 162 (175)
++..+ . ++..+++++.++|+|||.+++.... ........+.+.+++.||++
T Consensus 146 ~~~~~----~---~~~~~l~~~~~~LkpgG~l~~~~g~----------------------~~~~~~~~~~~~l~~~g~~~ 196 (240)
T 1xdz_A 146 TARAV----A---RLSVLSELCLPLVKKNGLFVALKAA----------------------SAEEELNAGKKAITTLGGEL 196 (240)
T ss_dssp EEECC----S---CHHHHHHHHGGGEEEEEEEEEEECC-----------------------CHHHHHHHHHHHHHTTEEE
T ss_pred EEecc----C---CHHHHHHHHHHhcCCCCEEEEEeCC----------------------CchHHHHHHHHHHHHcCCeE
Confidence 99663 2 3459999999999999988774110 00111356778889999987
Q ss_pred EEe
Q 030558 163 KHL 165 (175)
Q Consensus 163 ~~~ 165 (175)
.++
T Consensus 197 ~~~ 199 (240)
T 1xdz_A 197 ENI 199 (240)
T ss_dssp EEE
T ss_pred eEE
Confidence 665
No 116
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.67 E-value=1.6e-16 Score=112.46 Aligned_cols=99 Identities=17% Similarity=0.256 Sum_probs=75.6
Q ss_pred CCCcEEEeCCCccHHHHHHHHhCCC-cEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCC
Q 030558 8 ERRRCIELGSGTGALAIFLRKAMNL-DITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASD 86 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~~~-~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~ 86 (175)
++.+|||+|||+|.++..+ +. +|+++|+|+.++ +.++++. ..+..+..+. ..+++.+++||+|++..
T Consensus 36 ~~~~vLdiG~G~G~~~~~l----~~~~v~~vD~s~~~~-~~a~~~~------~~~~~~~~d~-~~~~~~~~~fD~v~~~~ 103 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL----PYPQKVGVEPSEAML-AVGRRRA------PEATWVRAWG-EALPFPGESFDVVLLFT 103 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC----CCSEEEEECCCHHHH-HHHHHHC------TTSEEECCCT-TSCCSCSSCEEEEEEES
T ss_pred CCCeEEEECCCCCHhHHhC----CCCeEEEEeCCHHHH-HHHHHhC------CCcEEEEccc-ccCCCCCCcEEEEEEcC
Confidence 6789999999999998877 55 899999999998 5555543 1123333222 23456678999999999
Q ss_pred cccCcccchHHHHHHHHHHhhcCCCCceeeccccC
Q 030558 87 ILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKN 121 (175)
Q Consensus 87 ~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~ 121 (175)
++++.. +...+++++.++|+|||.+++..+..
T Consensus 104 ~l~~~~---~~~~~l~~~~~~L~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 104 TLEFVE---DVERVLLEARRVLRPGGALVVGVLEA 135 (211)
T ss_dssp CTTTCS---CHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred hhhhcC---CHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 995554 45599999999999999999986543
No 117
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.67 E-value=4.4e-16 Score=108.31 Aligned_cols=105 Identities=14% Similarity=0.145 Sum_probs=81.0
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCC-CcceeeccCCCCCCCCCCCccEEEeC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITP-ALPHIKHSWGDAFPIPNPDWDLILAS 85 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~fD~i~~~ 85 (175)
.++.+|||+|||+|.++..+++. +.+|+++|+++.++ +.++++....+... ++..+..+..+. ..+++||+|+++
T Consensus 51 ~~~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~-~~a~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~D~v~~~ 126 (194)
T 1dus_A 51 DKDDDILDLGCGYGVIGIALADE-VKSTTMADINRRAI-KLAKENIKLNNLDNYDIRVVHSDLYEN--VKDRKYNKIITN 126 (194)
T ss_dssp CTTCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHH-HHHHHHHHHTTCTTSCEEEEECSTTTT--CTTSCEEEEEEC
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHH-HHHHHHHHHcCCCccceEEEECchhcc--cccCCceEEEEC
Confidence 36789999999999999999888 88999999999998 77777777665521 144444444332 335689999998
Q ss_pred CcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
.++ ++. ......+++++.++|+|||.+++.
T Consensus 127 ~~~-~~~-~~~~~~~l~~~~~~L~~gG~l~~~ 156 (194)
T 1dus_A 127 PPI-RAG-KEVLHRIIEEGKELLKDNGEIWVV 156 (194)
T ss_dssp CCS-TTC-HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCc-ccc-hhHHHHHHHHHHHHcCCCCEEEEE
Confidence 876 321 345679999999999999988885
No 118
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.67 E-value=9.1e-16 Score=105.83 Aligned_cols=122 Identities=18% Similarity=0.226 Sum_probs=90.6
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeC
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILAS 85 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~ 85 (175)
..++.+|||+|||+|.++..+++ .+.+|+++|+++.++ +.++++...++. .++..+..+..+ ++++++||+|++.
T Consensus 33 ~~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~-~~a~~~~~~~~~-~~~~~~~~d~~~--~~~~~~~D~i~~~ 107 (183)
T 2yxd_A 33 LNKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAI-EVTKQNLAKFNI-KNCQIIKGRAED--VLDKLEFNKAFIG 107 (183)
T ss_dssp CCTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHH-HHHHHHHHHTTC-CSEEEEESCHHH--HGGGCCCSEEEEC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHH-HHHHHHHHHcCC-CcEEEEECCccc--cccCCCCcEEEEC
Confidence 34678999999999999999988 588999999999998 777777777665 233344333322 3344689999998
Q ss_pred CcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCeeEEe
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVKHL 165 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 165 (175)
.+ ..+..+++++.+. |||.+++.... ......+.+.+++.|+.++.+
T Consensus 108 ~~-------~~~~~~l~~~~~~--~gG~l~~~~~~------------------------~~~~~~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 108 GT-------KNIEKIIEILDKK--KINHIVANTIV------------------------LENAAKIINEFESRGYNVDAV 154 (183)
T ss_dssp SC-------SCHHHHHHHHHHT--TCCEEEEEESC------------------------HHHHHHHHHHHHHTTCEEEEE
T ss_pred Cc-------ccHHHHHHHHhhC--CCCEEEEEecc------------------------cccHHHHHHHHHHcCCeEEEE
Confidence 77 2344889999988 99988885221 112367888899999887765
No 119
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.66 E-value=1.2e-16 Score=112.82 Aligned_cols=108 Identities=9% Similarity=0.040 Sum_probs=78.9
Q ss_pred CCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCCc
Q 030558 8 ERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASDI 87 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~~ 87 (175)
++.+|||+|||+|.+++.+++....+|+++|+|+.++ +.++++...++. .++..+..+..+.++...++||+|++...
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l-~~a~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~fD~V~~~~p 131 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVS-QQLIKNLATLKA-GNARVVNSNAMSFLAQKGTPHNIVFVDPP 131 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHH-HHHHHHHHHTTC-CSEEEECSCHHHHHSSCCCCEEEEEECCS
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHH-HHHHHHHHHcCC-CcEEEEECCHHHHHhhcCCCCCEEEECCC
Confidence 6789999999999999987777556899999999998 788888877665 33333333322223444568999999877
Q ss_pred ccCcccchHHHHHHHHHHh--hcCCCCceeeccccC
Q 030558 88 LLYVKQYSNLIKSLSVLLK--SYKPKDSQVGHLTKN 121 (175)
Q Consensus 88 l~~~~~~~~~~~~l~~l~~--~l~pgG~~~~~~~~~ 121 (175)
+ +.. ....+++.+.+ +|+|||.+++.....
T Consensus 132 ~-~~~---~~~~~l~~l~~~~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 132 F-RRG---LLEETINLLEDNGWLADEALIYVESEVE 163 (202)
T ss_dssp S-STT---THHHHHHHHHHTTCEEEEEEEEEEEEGG
T ss_pred C-CCC---cHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 3 433 34477777765 599999998875443
No 120
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.66 E-value=5.7e-16 Score=111.27 Aligned_cols=102 Identities=11% Similarity=0.023 Sum_probs=72.9
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCC-CcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCC---CCCCCCCccE
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMN-LDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDA---FPIPNPDWDL 81 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~fD~ 81 (175)
..++.+|||+|||+|.++..+++..+ .+|+++|+|+.++ +.++.+.... .++..+..+..+. .++. ++||+
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~-~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~-~~~D~ 146 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIM-RELLDACAER---ENIIPILGDANKPQEYANIV-EKVDV 146 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHH-HHHHHHTTTC---TTEEEEECCTTCGGGGTTTS-CCEEE
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHH-HHHHHHhhcC---CCeEEEECCCCCcccccccC-ccEEE
Confidence 44678999999999999999998853 6899999999998 6666554432 2233333333221 2333 68999
Q ss_pred EEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 82 ILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 82 i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
|+.. .........+++++.+.|+|||.+++.
T Consensus 147 v~~~-----~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 147 IYED-----VAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp EEEC-----CCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEe-----cCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 9932 233434457899999999999999986
No 121
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.66 E-value=3.3e-16 Score=119.61 Aligned_cols=111 Identities=15% Similarity=0.110 Sum_probs=84.6
Q ss_pred CccccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEE
Q 030558 3 HREWIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLI 82 (175)
Q Consensus 3 ~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i 82 (175)
++..++|++|||||||+|.+++.+|+.++.+|+|+|.|+ ++ +.++++...|++..++..+..+..+ +.+ +++||+|
T Consensus 78 ~~~~~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~-~~a~~~~~~n~~~~~i~~i~~~~~~-~~l-pe~~Dvi 153 (376)
T 4hc4_A 78 NWAALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IW-QQAREVVRFNGLEDRVHVLPGPVET-VEL-PEQVDAI 153 (376)
T ss_dssp THHHHTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-TH-HHHHHHHHHTTCTTTEEEEESCTTT-CCC-SSCEEEE
T ss_pred CHHhcCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HH-HHHHHHHHHcCCCceEEEEeeeeee-ecC-CccccEE
Confidence 445678999999999999999999998677899999996 76 7788888999887666666655433 222 3689999
Q ss_pred EeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 83 LASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 83 ~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
++..+-+.......+..++....+.|+|||.++-.
T Consensus 154 vsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP~ 188 (376)
T 4hc4_A 154 VSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLPA 188 (376)
T ss_dssp ECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEESC
T ss_pred EeecccccccccchhhhHHHHHHhhCCCCceECCc
Confidence 99554433343335568888888999999977654
No 122
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.66 E-value=2.1e-16 Score=114.37 Aligned_cols=108 Identities=10% Similarity=-0.074 Sum_probs=77.6
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCC---CCC-CCCccE
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAF---PIP-NPDWDL 81 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~fD~ 81 (175)
..++.+|||+|||+|.++..+++. +.+|+++|+|+.++ +.++++... .++..+..+..+.. ++. ...||+
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~-~~~v~gvD~s~~~~-~~a~~~~~~----~~~~~~~~d~~~~~~~~~~~~~~~~d~ 127 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQF-FPRVIGLDVSKSAL-EIAAKENTA----ANISYRLLDGLVPEQAAQIHSEIGDAN 127 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHH-SSCEEEEESCHHHH-HHHHHHSCC----TTEEEEECCTTCHHHHHHHHHHHCSCE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHh-CCCEEEEECCHHHH-HHHHHhCcc----cCceEEECcccccccccccccccCccE
Confidence 346789999999999999999988 55999999999998 666555421 12333333322210 011 124999
Q ss_pred EEeCCcccCcccchHHHHHHHHHHhhcCCCCceeecccc
Q 030558 82 ILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTK 120 (175)
Q Consensus 82 i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~ 120 (175)
|++..++++. ..++...+++++.++|+|||.+++....
T Consensus 128 v~~~~~~~~~-~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 165 (245)
T 3ggd_A 128 IYMRTGFHHI-PVEKRELLGQSLRILLGKQGAMYLIELG 165 (245)
T ss_dssp EEEESSSTTS-CGGGHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred EEEcchhhcC-CHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 9999998554 4557789999999999999998887443
No 123
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.66 E-value=4.1e-16 Score=108.32 Aligned_cols=127 Identities=17% Similarity=0.203 Sum_probs=91.4
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeC
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILAS 85 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~ 85 (175)
..++.+|||+|||+|.++..+++.. .+|+++|+++.++ +.++++....+....+.....+..+.++. .++||+|++.
T Consensus 31 ~~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~-~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~D~v~~~ 107 (192)
T 1l3i_A 31 PGKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAI-STTEMNLQRHGLGDNVTLMEGDAPEALCK-IPDIDIAVVG 107 (192)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHH-HHHHHHHHHTTCCTTEEEEESCHHHHHTT-SCCEEEEEES
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHH-HHHHHHHHHcCCCcceEEEecCHHHhccc-CCCCCEEEEC
Confidence 4567899999999999999998874 8899999999998 77777776665533344443333221111 1489999998
Q ss_pred CcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCeeEEe
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVKHL 165 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 165 (175)
.++ . .+..+++++.++|+|||.+++..+. ......+.+.+++.||.++.+
T Consensus 108 ~~~---~---~~~~~l~~~~~~l~~gG~l~~~~~~------------------------~~~~~~~~~~l~~~g~~~~~~ 157 (192)
T 1l3i_A 108 GSG---G---ELQEILRIIKDKLKPGGRIIVTAIL------------------------LETKFEAMECLRDLGFDVNIT 157 (192)
T ss_dssp CCT---T---CHHHHHHHHHHTEEEEEEEEEEECB------------------------HHHHHHHHHHHHHTTCCCEEE
T ss_pred Cch---H---HHHHHHHHHHHhcCCCcEEEEEecC------------------------cchHHHHHHHHHHCCCceEEE
Confidence 776 2 2348999999999999988875221 112367788889999865443
No 124
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.65 E-value=3e-16 Score=114.62 Aligned_cols=101 Identities=18% Similarity=0.343 Sum_probs=77.1
Q ss_pred CCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCCc
Q 030558 8 ERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASDI 87 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~~ 87 (175)
++.+|||+|||+|.++..+++. +.+|+++|+|+.++ +.++++... ..+..+. ..+++.+++||+|++..+
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l-~~a~~~~~~-------~~~~~d~-~~~~~~~~~fD~v~~~~~ 123 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER-GFEVVLVDPSKEML-EVAREKGVK-------NVVEAKA-EDLPFPSGAFEAVLALGD 123 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT-TCEEEEEESCHHHH-HHHHHHTCS-------CEEECCT-TSCCSCTTCEEEEEECSS
T ss_pred CCCeEEEeCCCcCHHHHHHHHc-CCeEEEEeCCHHHH-HHHHhhcCC-------CEEECcH-HHCCCCCCCEEEEEEcch
Confidence 6789999999999999999887 78999999999998 555544321 1222222 334566789999999887
Q ss_pred ccCcccchHHHHHHHHHHhhcCCCCceeecccc
Q 030558 88 LLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTK 120 (175)
Q Consensus 88 l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~ 120 (175)
+.+... ++..+++++.++|+|||.+++..+.
T Consensus 124 ~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 124 VLSYVE--NKDKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp HHHHCS--CHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred hhhccc--cHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 645532 3669999999999999999987543
No 125
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.65 E-value=1.8e-16 Score=115.30 Aligned_cols=128 Identities=13% Similarity=0.093 Sum_probs=90.6
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCC--CCCCCccEEE
Q 030558 7 IERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFP--IPNPDWDLIL 83 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~fD~i~ 83 (175)
.++.+|||||||+|..++.++... +.+|+++|+|+.++ +.++.+....+.. ++..+..+..+... ..+++||+|+
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~-~~a~~~~~~~~l~-~v~~~~~d~~~~~~~~~~~~~fD~I~ 156 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKV-AFVERAIEVLGLK-GARALWGRAEVLAREAGHREAYARAV 156 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHH-HHHHHHHHHHTCS-SEEEEECCHHHHTTSTTTTTCEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHH-HHHHHHHHHhCCC-ceEEEECcHHHhhcccccCCCceEEE
Confidence 467899999999999999998874 67899999999998 7888888776662 23333333222111 2247899999
Q ss_pred eCCcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCeeE
Q 030558 84 ASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVK 163 (175)
Q Consensus 84 ~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 163 (175)
+..+- ++..+++.+.++|+|||++++.... ........+.+.++..|+.+.
T Consensus 157 s~a~~-------~~~~ll~~~~~~LkpgG~l~~~~g~----------------------~~~~e~~~~~~~l~~~G~~~~ 207 (249)
T 3g89_A 157 ARAVA-------PLCVLSELLLPFLEVGGAAVAMKGP----------------------RVEEELAPLPPALERLGGRLG 207 (249)
T ss_dssp EESSC-------CHHHHHHHHGGGEEEEEEEEEEECS----------------------CCHHHHTTHHHHHHHHTEEEE
T ss_pred ECCcC-------CHHHHHHHHHHHcCCCeEEEEEeCC----------------------CcHHHHHHHHHHHHHcCCeEE
Confidence 97542 3348999999999999987774111 001112556777888898876
Q ss_pred Ee
Q 030558 164 HL 165 (175)
Q Consensus 164 ~~ 165 (175)
++
T Consensus 208 ~~ 209 (249)
T 3g89_A 208 EV 209 (249)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 126
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.65 E-value=1.9e-15 Score=107.99 Aligned_cols=133 Identities=16% Similarity=0.108 Sum_probs=97.6
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILAS 85 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~ 85 (175)
.++.+|||||||+|.+++.+++.. ..+|+|+|+++.++ +.+++|...+++..++.....+..+..+ +.+.||+|+..
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al-~~A~~N~~~~gl~~~I~~~~gD~l~~~~-~~~~~D~Ivia 97 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPY-QSALKNVSEHGLTSKIDVRLANGLSAFE-EADNIDTITIC 97 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHH-HHHHHHHHHTTCTTTEEEEECSGGGGCC-GGGCCCEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHH-HHHHHHHHHcCCCCcEEEEECchhhccc-cccccCEEEEe
Confidence 357899999999999999999974 44799999999998 8899999999885555554444333222 22379998876
Q ss_pred CcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCeeEEe
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVKHL 165 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 165 (175)
.+- -+.+..++.+..+.++++|++++. | - .....+.+++.+.||.+.+-
T Consensus 98 GmG-----g~lI~~IL~~~~~~l~~~~~lIlq---------------p--------~---~~~~~lr~~L~~~Gf~i~~E 146 (230)
T 3lec_A 98 GMG-----GRLIADILNNDIDKLQHVKTLVLQ---------------P--------N---NREDDLRKWLAANDFEIVAE 146 (230)
T ss_dssp EEC-----HHHHHHHHHHTGGGGTTCCEEEEE---------------E--------S---SCHHHHHHHHHHTTEEEEEE
T ss_pred CCc-----hHHHHHHHHHHHHHhCcCCEEEEE---------------C--------C---CChHHHHHHHHHCCCEEEEE
Confidence 664 234568888889999999977774 1 0 01478889999999986654
Q ss_pred -----cceEEEE
Q 030558 166 -----GSRVYCI 172 (175)
Q Consensus 166 -----~~~~~~i 172 (175)
..+.|.|
T Consensus 147 ~lv~e~~~~Yei 158 (230)
T 3lec_A 147 DILTENDKRYEI 158 (230)
T ss_dssp EEEEC--CEEEE
T ss_pred EEEEECCEEEEE
Confidence 3566655
No 127
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.65 E-value=6.9e-16 Score=116.44 Aligned_cols=109 Identities=16% Similarity=0.182 Sum_probs=83.4
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeC
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILAS 85 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~ 85 (175)
..++++|||+|||+|.++..+++....+|+|+|+| .++ +.++++...++...++..+..+.. ..++++++||+|++.
T Consensus 36 ~~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~-~~a~~~~~~~~~~~~i~~~~~d~~-~~~~~~~~~D~Ivs~ 112 (328)
T 1g6q_1 36 LFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SII-EMAKELVELNGFSDKITLLRGKLE-DVHLPFPKVDIIISE 112 (328)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THH-HHHHHHHHHTTCTTTEEEEESCTT-TSCCSSSCEEEEEEC
T ss_pred hcCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHH-HHHHHHHHHcCCCCCEEEEECchh-hccCCCCcccEEEEe
Confidence 45788999999999999999988744589999999 587 777878777777545555544443 234455789999998
Q ss_pred CcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
.+.++......+..++.++.+.|+|||.++..
T Consensus 113 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~~ 144 (328)
T 1g6q_1 113 WMGYFLLYESMMDTVLYARDHYLVEGGLIFPD 144 (328)
T ss_dssp CCBTTBSTTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred CchhhcccHHHHHHHHHHHHhhcCCCeEEEEe
Confidence 76555444555668999999999999988743
No 128
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.65 E-value=8.1e-16 Score=118.09 Aligned_cols=107 Identities=13% Similarity=0.180 Sum_probs=82.7
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASD 86 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~ 86 (175)
.++.+|||+|||+|.++..+++. +.+|+++|+|+.++ +.++++...++.. +..+..+..+. ...+++||+|+++.
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~-g~~V~gvDis~~al-~~A~~n~~~~~~~--v~~~~~D~~~~-~~~~~~fD~Ii~np 306 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARM-GAEVVGVEDDLASV-LSLQKGLEANALK--AQALHSDVDEA-LTEEARFDIIVTNP 306 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHT-TCEEEEEESBHHHH-HHHHHHHHHTTCC--CEEEECSTTTT-SCTTCCEEEEEECC
T ss_pred CCCCEEEEEeeeCCHHHHHHHHc-CCEEEEEECCHHHH-HHHHHHHHHcCCC--eEEEEcchhhc-cccCCCeEEEEECC
Confidence 36789999999999999999887 78999999999998 8888888887762 33333333222 22357999999998
Q ss_pred cccCc--ccchHHHHHHHHHHhhcCCCCceeecc
Q 030558 87 ILLYV--KQYSNLIKSLSVLLKSYKPKDSQVGHL 118 (175)
Q Consensus 87 ~l~~~--~~~~~~~~~l~~l~~~l~pgG~~~~~~ 118 (175)
.+++. ...+....+++++.++|+|||.++++.
T Consensus 307 p~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~ 340 (381)
T 3dmg_A 307 PFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVS 340 (381)
T ss_dssp CCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred chhhcccccHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 87331 224566799999999999999999863
No 129
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.64 E-value=3.3e-16 Score=111.75 Aligned_cols=105 Identities=12% Similarity=0.129 Sum_probs=77.0
Q ss_pred CCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCC---CC--CCCCCccE
Q 030558 8 ERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDA---FP--IPNPDWDL 81 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~fD~ 81 (175)
++.+|||||||+|.++..+|+.. +.+|+|+|+|+.++ +.++++....+. .++.+..++. ++ +++++||.
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l-~~a~~~~~~~~l----~nv~~~~~Da~~~l~~~~~~~~~d~ 108 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGV-GACLASAHEEGL----SNLRVMCHDAVEVLHKMIPDNSLRM 108 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHH-HHHHHHHHHTTC----SSEEEECSCHHHHHHHHSCTTCEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHH-HHHHHHHHHhCC----CcEEEEECCHHHHHHHHcCCCChhe
Confidence 46789999999999999998875 45799999999998 777777776665 2344444432 22 56789999
Q ss_pred EEeCCcccCcccchHH------HHHHHHHHhhcCCCCceeecc
Q 030558 82 ILASDILLYVKQYSNL------IKSLSVLLKSYKPKDSQVGHL 118 (175)
Q Consensus 82 i~~~~~l~~~~~~~~~------~~~l~~l~~~l~pgG~~~~~~ 118 (175)
|++.....+ +..... ..+++++.++|||||.+++.+
T Consensus 109 v~~~~~~p~-~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 109 VQLFFPDPW-HKARHNKRRIVQVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp EEEESCCCC-CSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEeCCCCc-cchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEe
Confidence 998743311 211111 259999999999999999874
No 130
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.64 E-value=1.6e-16 Score=115.68 Aligned_cols=153 Identities=8% Similarity=0.022 Sum_probs=92.1
Q ss_pred CCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCC-C-CCC---CCCccE
Q 030558 8 ERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDA-F-PIP---NPDWDL 81 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~---~~~fD~ 81 (175)
++.+|||+|||+|.++..+++.. +.+|+++|+|+.++ +.++++...++...++..+..+..+. . ++. +++||+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCF-NYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDF 143 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHH-HHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHH-HHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccE
Confidence 57799999999999999888764 67899999999998 78888888777644455555443331 2 233 268999
Q ss_pred EEeCCcccCcc-c-----------chHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchh
Q 030558 82 ILASDILLYVK-Q-----------YSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDET 149 (175)
Q Consensus 82 i~~~~~l~~~~-~-----------~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (175)
|+++..++... . .+....++.+++++|||||.+.+...-..... ....... +........ ....
T Consensus 144 i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~~~~~-~~l~~~g-~~~~~~~~~--~~~~ 219 (254)
T 2h00_A 144 CMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSL-QLKKRLR-WYSCMLGKK--CSLA 219 (254)
T ss_dssp EEECCCCC-------------------------CTTTTHHHHTHHHHHHHHHHHHH-HHGGGBS-CEEEEESST--TSHH
T ss_pred EEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHHHHHH-hcccceE-EEEECCCCh--hHHH
Confidence 99987753222 0 01123567888999999998887622111000 0001111 222111111 1236
Q ss_pred HHHHHHHHcCCeeEEe
Q 030558 150 IFFTSCENAGLEVKHL 165 (175)
Q Consensus 150 ~~~~~~~~~g~~~~~~ 165 (175)
.+.++++++||+..++
T Consensus 220 ~~~~~l~~~Gf~~v~~ 235 (254)
T 2h00_A 220 PLKEELRIQGVPKVTY 235 (254)
T ss_dssp HHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHcCCCceEE
Confidence 7888999999975443
No 131
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.64 E-value=5.2e-16 Score=113.53 Aligned_cols=111 Identities=7% Similarity=0.029 Sum_probs=81.9
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhh---CCCCCCcceeeccCCCCC------CCCC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTT---NGITPALPHIKHSWGDAF------PIPN 76 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~------~~~~ 76 (175)
.++.+|||+|||+|.+++.+++.. +.+|+++|+++.++ +.++++... +++..++..+..+..+.. .+.+
T Consensus 35 ~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~-~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 113 (260)
T 2ozv_A 35 DRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMA-EFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPD 113 (260)
T ss_dssp CSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHH-HHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCT
T ss_pred cCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHH-HHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCC
Confidence 357899999999999999999886 56899999999998 888888877 666434455554444331 2346
Q ss_pred CCccEEEeCCcccCc---------------ccchHHHHHHHHHHhhcCCCCceeecc
Q 030558 77 PDWDLILASDILLYV---------------KQYSNLIKSLSVLLKSYKPKDSQVGHL 118 (175)
Q Consensus 77 ~~fD~i~~~~~l~~~---------------~~~~~~~~~l~~l~~~l~pgG~~~~~~ 118 (175)
++||+|+++..++.. .....+..+++.+.++|+|||++++..
T Consensus 114 ~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 114 EHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp TCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 789999998665222 111235689999999999999998863
No 132
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.64 E-value=2.6e-15 Score=110.63 Aligned_cols=128 Identities=14% Similarity=0.210 Sum_probs=91.2
Q ss_pred CCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCC
Q 030558 8 ERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASD 86 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~ 86 (175)
++.+|||+|||+|..+..+++.. +.+|+++|+|+.++ +.++++....+.. ++..+..++.+. ..+++||+|+++.
T Consensus 109 ~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l-~~a~~n~~~~~~~-~v~~~~~d~~~~--~~~~~fD~Iv~np 184 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAV-SLAQRNAQHLAIK-NIHILQSDWFSA--LAGQQFAMIVSNP 184 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHH-HHHHHHHHHHTCC-SEEEECCSTTGG--GTTCCEEEEEECC
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHH-HHHHHHHHHcCCC-ceEEEEcchhhh--cccCCccEEEECC
Confidence 56799999999999999998765 56899999999998 7778787766652 333333333322 2356899999985
Q ss_pred ccc-------------Cccc---------chHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCC
Q 030558 87 ILL-------------YVKQ---------YSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIG 144 (175)
Q Consensus 87 ~l~-------------~~~~---------~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (175)
.+. +.+. ......+++++.+.|+|||.+++....
T Consensus 185 Py~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~------------------------ 240 (276)
T 2b3t_A 185 PYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGW------------------------ 240 (276)
T ss_dssp CCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCS------------------------
T ss_pred CCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECc------------------------
Confidence 431 1110 134578999999999999988884210
Q ss_pred CcchhHHHHHHHHcCCeeEE
Q 030558 145 KEDETIFFTSCENAGLEVKH 164 (175)
Q Consensus 145 ~~~~~~~~~~~~~~g~~~~~ 164 (175)
.....+.+.++++||+..+
T Consensus 241 -~~~~~~~~~l~~~Gf~~v~ 259 (276)
T 2b3t_A 241 -QQGEAVRQAFILAGYHDVE 259 (276)
T ss_dssp -SCHHHHHHHHHHTTCTTCC
T ss_pred -hHHHHHHHHHHHCCCcEEE
Confidence 1247788889999997433
No 133
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.64 E-value=4.3e-17 Score=117.34 Aligned_cols=147 Identities=10% Similarity=0.043 Sum_probs=81.8
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASD 86 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~ 86 (175)
.++++|||||||+|.++..+++....+|+|+|+|+.|+ +.+.++......... ..+.....+.++ ...||.+.+..
T Consensus 36 ~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml-~~a~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~d~~~~D~ 111 (232)
T 3opn_A 36 INGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQL-AWKIRSDERVVVMEQ-FNFRNAVLADFE--QGRPSFTSIDV 111 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCC-CHHHHTCTTEEEECS-CCGGGCCGGGCC--SCCCSEEEECC
T ss_pred CCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHH-HHHHHhCcccccccc-ceEEEeCHhHcC--cCCCCEEEEEE
Confidence 35789999999999999999888435899999999998 444332211000000 011111111111 11245444433
Q ss_pred cccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCeeEEec
Q 030558 87 ILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVKHLG 166 (175)
Q Consensus 87 ~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 166 (175)
++.. . ..+++++.++|||||.+++..................+.....+. .+..++.+.++++||++..+.
T Consensus 112 v~~~---l---~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~---~~~~~l~~~l~~aGf~v~~~~ 182 (232)
T 3opn_A 112 SFIS---L---DLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQ---MTIEKVLKTATQLGFSVKGLT 182 (232)
T ss_dssp SSSC---G---GGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHH---HHHHHHHHHHHHHTEEEEEEE
T ss_pred Ehhh---H---HHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhH---HHHHHHHHHHHHCCCEEEEEE
Confidence 3311 1 389999999999999998863111110000000000000000011 135789999999999988774
No 134
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.64 E-value=6.4e-15 Score=105.71 Aligned_cols=139 Identities=9% Similarity=-0.016 Sum_probs=82.5
Q ss_pred ccccCCCcEEEeCCCccHHHHHHHHhC--CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCC--CCCCCCc
Q 030558 4 REWIERRRCIELGSGTGALAIFLRKAM--NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAF--PIPNPDW 79 (175)
Q Consensus 4 ~~~~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~f 79 (175)
....+|.+|||+|||+|..+..+++.. ..+|+|+|+++.|++...+...... ++..+..+..... ....++|
T Consensus 72 ~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~----nv~~i~~Da~~~~~~~~~~~~~ 147 (232)
T 3id6_C 72 NPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRP----NIFPLLADARFPQSYKSVVENV 147 (232)
T ss_dssp CSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCT----TEEEEECCTTCGGGTTTTCCCE
T ss_pred cCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcC----CeEEEEcccccchhhhccccce
Confidence 346679999999999999999998864 3479999999998733322222221 2233333322111 1224689
Q ss_pred cEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcC
Q 030558 80 DLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAG 159 (175)
Q Consensus 80 D~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 159 (175)
|+|++.... + .....+...+.+.|||||++++++...-... .. ........-.+.++++|
T Consensus 148 D~I~~d~a~---~--~~~~il~~~~~~~LkpGG~lvisik~~~~d~-t~--------------~~~e~~~~~~~~L~~~g 207 (232)
T 3id6_C 148 DVLYVDIAQ---P--DQTDIAIYNAKFFLKVNGDMLLVIKARSIDV-TK--------------DPKEIYKTEVEKLENSN 207 (232)
T ss_dssp EEEEECCCC---T--THHHHHHHHHHHHEEEEEEEEEEEC--------C--------------CSSSSTTHHHHHHHHTT
T ss_pred EEEEecCCC---h--hHHHHHHHHHHHhCCCCeEEEEEEccCCccc-CC--------------CHHHHHHHHHHHHHHCC
Confidence 999987543 2 2222344555669999999998743221000 00 00111244556777889
Q ss_pred CeeEEec
Q 030558 160 LEVKHLG 166 (175)
Q Consensus 160 ~~~~~~~ 166 (175)
|++.+..
T Consensus 208 f~~~~~~ 214 (232)
T 3id6_C 208 FETIQII 214 (232)
T ss_dssp EEEEEEE
T ss_pred CEEEEEe
Confidence 9877653
No 135
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.63 E-value=5.3e-16 Score=110.79 Aligned_cols=106 Identities=12% Similarity=0.099 Sum_probs=76.6
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhC--CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCC-----CCCCc
Q 030558 7 IERRRCIELGSGTGALAIFLRKAM--NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPI-----PNPDW 79 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~f 79 (175)
.++++|||||||+|..++.+++.. +.+|+++|+++.++ +.++++....+...++..+..+..+.++. ..++|
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~f 135 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCA-AITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTL 135 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHH-HHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCC
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHH-HHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCce
Confidence 467899999999999999998853 67899999999998 77887877766633344443332222222 12689
Q ss_pred cEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 80 DLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 80 D~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
|+|++.... ........+++.+ ++|+|||.+++.
T Consensus 136 D~V~~d~~~---~~~~~~~~~~~~~-~~LkpgG~lv~~ 169 (221)
T 3u81_A 136 DMVFLDHWK---DRYLPDTLLLEKC-GLLRKGTVLLAD 169 (221)
T ss_dssp SEEEECSCG---GGHHHHHHHHHHT-TCCCTTCEEEES
T ss_pred EEEEEcCCc---ccchHHHHHHHhc-cccCCCeEEEEe
Confidence 999997665 2233444677777 999999988874
No 136
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.63 E-value=2.7e-15 Score=106.59 Aligned_cols=108 Identities=9% Similarity=0.005 Sum_probs=76.0
Q ss_pred CCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCC--CCCCCccEEEe
Q 030558 8 ERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFP--IPNPDWDLILA 84 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~fD~i~~ 84 (175)
++.+|||||||+|.++..+++.. +.+|+|+|+|+.++ +.++++....+. .++..+..+..+ ++ +.+++||.|++
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l-~~a~~~~~~~~~-~nv~~~~~d~~~-l~~~~~~~~~d~v~~ 114 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVI-VTAVQKVKDSEA-QNVKLLNIDADT-LTDVFEPGEVKRVYL 114 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHH-HHHHHHHHHSCC-SSEEEECCCGGG-HHHHCCTTSCCEEEE
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHH-HHHHHHHHHcCC-CCEEEEeCCHHH-HHhhcCcCCcCEEEE
Confidence 46789999999999999998875 57899999999998 777777776655 223333333222 22 45678999987
Q ss_pred CCcccCcccc-----hHHHHHHHHHHhhcCCCCceeecc
Q 030558 85 SDILLYVKQY-----SNLIKSLSVLLKSYKPKDSQVGHL 118 (175)
Q Consensus 85 ~~~l~~~~~~-----~~~~~~l~~l~~~l~pgG~~~~~~ 118 (175)
.....+.... .....+++++.++|+|||.+++.+
T Consensus 115 ~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 115 NFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp ESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred ECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 6432111000 012488999999999999998863
No 137
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.63 E-value=1.4e-15 Score=107.89 Aligned_cols=112 Identities=15% Similarity=0.131 Sum_probs=83.8
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASD 86 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~ 86 (175)
.++.+|||+|||+|.++..+ +.+|+++|+|+. .+..+..+.. .+++.+++||+|++..
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l----~~~v~~~D~s~~-----------------~~~~~~~d~~-~~~~~~~~fD~v~~~~ 123 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSI----RNPVHCFDLASL-----------------DPRVTVCDMA-QVPLEDESVDVAVFCL 123 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHC----CSCEEEEESSCS-----------------STTEEESCTT-SCSCCTTCEEEEEEES
T ss_pred CCCCeEEEECCcCCHHHHHh----hccEEEEeCCCC-----------------CceEEEeccc-cCCCCCCCEeEEEEeh
Confidence 35689999999999998777 478999999986 1122333322 2456678999999999
Q ss_pred cccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCeeEEec
Q 030558 87 ILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVKHLG 166 (175)
Q Consensus 87 ~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 166 (175)
++ |+ ++...+++++.++|+|||.+++..... .. .+...+.+.++++||++....
T Consensus 124 ~l-~~---~~~~~~l~~~~~~L~~gG~l~i~~~~~--------------------~~--~~~~~~~~~l~~~Gf~~~~~~ 177 (215)
T 2zfu_A 124 SL-MG---TNIRDFLEEANRVLKPGGLLKVAEVSS--------------------RF--EDVRTFLRAVTKLGFKIVSKD 177 (215)
T ss_dssp CC-CS---SCHHHHHHHHHHHEEEEEEEEEEECGG--------------------GC--SCHHHHHHHHHHTTEEEEEEE
T ss_pred hc-cc---cCHHHHHHHHHHhCCCCeEEEEEEcCC--------------------CC--CCHHHHHHHHHHCCCEEEEEe
Confidence 98 43 355699999999999999988863221 01 135889999999999987753
No 138
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.63 E-value=1.8e-15 Score=115.30 Aligned_cols=152 Identities=16% Similarity=0.085 Sum_probs=97.9
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEe
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILA 84 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~ 84 (175)
.....+|+|||||+|..+..+++.. +.+++..|. |.++ +.++++....+ ..++..+ .+|....+...+|+|++
T Consensus 177 ~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~-~~a~~~~~~~~-~~rv~~~---~gD~~~~~~~~~D~~~~ 250 (353)
T 4a6d_A 177 LSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVV-WTAKQHFSFQE-EEQIDFQ---EGDFFKDPLPEADLYIL 250 (353)
T ss_dssp GGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHH-HHHHHHSCC---CCSEEEE---ESCTTTSCCCCCSEEEE
T ss_pred cccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHH-HHHHHhhhhcc-cCceeee---cCccccCCCCCceEEEe
Confidence 4456789999999999999998875 556888887 5576 66665554333 2344444 44444333456899999
Q ss_pred CCcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCC-CCCCCCceE-eeeeccCCCcchhHHHHHHHHcCCee
Q 030558 85 SDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGT-EGLPWPAFL-MSWRRRIGKEDETIFFTSCENAGLEV 162 (175)
Q Consensus 85 ~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~ 162 (175)
..++++|. .++..++|+++++.|+|||++++...-..+.... .....-.+. ...... ...+.++|.++++++||+.
T Consensus 251 ~~vlh~~~-d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g-~ert~~e~~~ll~~AGf~~ 328 (353)
T 4a6d_A 251 ARVLHDWA-DGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEG-QERTPTHYHMLLSSAGFRD 328 (353)
T ss_dssp ESSGGGSC-HHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSC-CCCCHHHHHHHHHHHTCEE
T ss_pred eeecccCC-HHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCC-cCCCHHHHHHHHHHCCCce
Confidence 99996665 4566789999999999999999985433221110 000000000 000010 1124689999999999987
Q ss_pred EEe
Q 030558 163 KHL 165 (175)
Q Consensus 163 ~~~ 165 (175)
.++
T Consensus 329 v~v 331 (353)
T 4a6d_A 329 FQF 331 (353)
T ss_dssp EEE
T ss_pred EEE
Confidence 765
No 139
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.63 E-value=4.9e-17 Score=130.86 Aligned_cols=154 Identities=12% Similarity=0.125 Sum_probs=99.2
Q ss_pred CCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCC--C--CCCCCCccEEE
Q 030558 8 ERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDA--F--PIPNPDWDLIL 83 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~fD~i~ 83 (175)
.+.+|||||||.|.++..||+. |.+|+|+|.++.+| +.++......+. ..+.+..++. + ...+++||+|+
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~-ga~V~giD~~~~~i-~~a~~~a~~~~~----~~~~~~~~~~~~~~~~~~~~~fD~v~ 139 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASK-GATIVGIDFQQENI-NVCRALAEENPD----FAAEFRVGRIEEVIAALEEGEFDLAI 139 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHH-HHHHHHHHTSTT----SEEEEEECCHHHHHHHCCTTSCSEEE
T ss_pred CCCeEEEECCCCcHHHHHHHhC-CCEEEEECCCHHHH-HHHHHHHHhcCC----CceEEEECCHHHHhhhccCCCccEEE
Confidence 4679999999999999999987 88999999999998 777766665553 1334433332 1 24567999999
Q ss_pred eCCcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCC-CCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCee
Q 030558 84 ASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGE-GTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEV 162 (175)
Q Consensus 84 ~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 162 (175)
+..+++|..+.... ..+..+++.+++++..++......... ...+.. -..|.... .+..|.+++.+.|..+
T Consensus 140 ~~e~~ehv~~~~~~-~~~~~~~~tl~~~~~~~~~~~~~~e~~~~~~p~~----~~~~~~~i---~~~~~~~~~~~~g~~~ 211 (569)
T 4azs_A 140 GLSVFHHIVHLHGI-DEVKRLLSRLADVTQAVILELAVKEEPFYWGVSQ----PDDPRELI---EQCAFYRLIGEFDTHL 211 (569)
T ss_dssp EESCHHHHHHHHCH-HHHHHHHHHHHHHSSEEEEECCCTTSSSGGGGGS----CSSGGGGT---TTSSEEEEEEEECCSS
T ss_pred ECcchhcCCCHHHH-HHHHHHHHHhccccceeeEEeccccccccccCCC----CccHHHhc---CHHHHHHHHHHcCCcc
Confidence 99999777654332 334567778888887666522221111 000000 00011111 1244556667788888
Q ss_pred EEecceEEEEecC
Q 030558 163 KHLGSRVYCIKLR 175 (175)
Q Consensus 163 ~~~~~~~~~i~~~ 175 (175)
..+..++|++.++
T Consensus 212 ~~~~~~~~~~s~~ 224 (569)
T 4azs_A 212 SPVPRPMYLVSNH 224 (569)
T ss_dssp SSCCEEEEEEESS
T ss_pred ccCCCceeeccCc
Confidence 8888888888654
No 140
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.63 E-value=4.2e-15 Score=107.02 Aligned_cols=133 Identities=14% Similarity=0.070 Sum_probs=96.4
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILAS 85 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~ 85 (175)
.++.+|||||||+|.+++.+++.. ..+|+|+|+++.++ +.+++|...+++..++.....+..+... +..+||+|++.
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al-~~A~~N~~~~gl~~~I~v~~gD~l~~~~-~~~~~D~Ivia 97 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPF-QSAQKQVRSSGLTEQIDVRKGNGLAVIE-KKDAIDTIVIA 97 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHH-HHHHHHHHHTTCTTTEEEEECSGGGGCC-GGGCCCEEEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHH-HHHHHHHHHcCCCceEEEEecchhhccC-ccccccEEEEe
Confidence 357899999999999999999974 34799999999998 8899999998885444444433322221 12369999876
Q ss_pred CcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCeeEEe
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVKHL 165 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 165 (175)
.+- -.-+..++.+..+.|++++++++. + . .....+.+++.+.||.+.+-
T Consensus 98 gmG-----g~lI~~IL~~~~~~L~~~~~lIlq---------------~--------~---~~~~~lr~~L~~~Gf~i~~E 146 (244)
T 3gnl_A 98 GMG-----GTLIRTILEEGAAKLAGVTKLILQ---------------P--------N---IAAWQLREWSEQNNWLITSE 146 (244)
T ss_dssp EEC-----HHHHHHHHHHTGGGGTTCCEEEEE---------------E--------S---SCHHHHHHHHHHHTEEEEEE
T ss_pred CCc-----hHHHHHHHHHHHHHhCCCCEEEEE---------------c--------C---CChHHHHHHHHHCCCEEEEE
Confidence 554 234568888999999999877774 0 0 12478889999999986332
Q ss_pred -----cceEEEE
Q 030558 166 -----GSRVYCI 172 (175)
Q Consensus 166 -----~~~~~~i 172 (175)
.++.|.|
T Consensus 147 ~lv~e~~k~Yei 158 (244)
T 3gnl_A 147 AILREDNKVYEI 158 (244)
T ss_dssp EEEEETTEEEEE
T ss_pred EEEEECCEEEEE
Confidence 5566654
No 141
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.63 E-value=7.1e-16 Score=118.25 Aligned_cols=110 Identities=11% Similarity=0.067 Sum_probs=80.6
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCC-CCCCCCccEEEe
Q 030558 7 IERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAF-PIPNPDWDLILA 84 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~fD~i~~ 84 (175)
..+.+|||+|||+|.+++.+++.. +.+|+++|+|+.++ +.++++...++.... ..+.+.+++.. ++.+++||+|++
T Consensus 221 ~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al-~~Ar~n~~~ngl~~~-~~v~~~~~D~~~~~~~~~fD~Ii~ 298 (375)
T 4dcm_A 221 NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAV-ASSRLNVETNMPEAL-DRCEFMINNALSGVEPFRFNAVLC 298 (375)
T ss_dssp SCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHH-HHHHHHHHHHCGGGG-GGEEEEECSTTTTCCTTCEEEEEE
T ss_pred cCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHH-HHHHHHHHHcCCCcC-ceEEEEechhhccCCCCCeeEEEE
Confidence 345899999999999999999986 67899999999998 788888877665211 12333444433 345679999999
Q ss_pred CCcccCcc--cchHHHHHHHHHHhhcCCCCceeecc
Q 030558 85 SDILLYVK--QYSNLIKSLSVLLKSYKPKDSQVGHL 118 (175)
Q Consensus 85 ~~~l~~~~--~~~~~~~~l~~l~~~l~pgG~~~~~~ 118 (175)
+..+++.. .......+++++.++|+|||+++++.
T Consensus 299 nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~ 334 (375)
T 4dcm_A 299 NPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVA 334 (375)
T ss_dssp CCCC-------CCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 98874321 12234478999999999999998863
No 142
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.63 E-value=8.5e-17 Score=111.64 Aligned_cols=110 Identities=16% Similarity=0.083 Sum_probs=78.4
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCC---CCCCCCccEEE
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAF---PIPNPDWDLIL 83 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~fD~i~ 83 (175)
.++++|||+|||+|.++..+++....+|+++|+++.++ +.++++...++...++..+..+..+.. +..+++||+|+
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~-~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~ 121 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAAL-KVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVL 121 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHH-HHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHH-HHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEE
Confidence 46789999999999999998886557899999999998 777777776654223333333332211 11257899999
Q ss_pred eCCcccCcccchHHHHHHHHH--HhhcCCCCceeeccccC
Q 030558 84 ASDILLYVKQYSNLIKSLSVL--LKSYKPKDSQVGHLTKN 121 (175)
Q Consensus 84 ~~~~l~~~~~~~~~~~~l~~l--~~~l~pgG~~~~~~~~~ 121 (175)
+...+ +.... ...++.+ .++|+|||.+++.....
T Consensus 122 ~~~~~-~~~~~---~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 122 LDPPY-AKQEI---VSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp ECCCG-GGCCH---HHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred ECCCC-CchhH---HHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 98774 43333 3666666 88899999998875444
No 143
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.63 E-value=4.6e-16 Score=111.94 Aligned_cols=104 Identities=14% Similarity=0.189 Sum_probs=79.4
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCC-CCCCCccEEEe
Q 030558 7 IERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFP-IPNPDWDLILA 84 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~fD~i~~ 84 (175)
.++++|||||||+|..+..+++.. +.+|+++|+++.++ +.++++....+...++..+..+..+.++ ..+++||+|++
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~ 148 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMI-QYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFI 148 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHH-HHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEE
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHH-HHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEE
Confidence 467899999999999999998843 67899999999998 7888888777764444444444433333 33679999997
Q ss_pred CCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 85 SDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 85 ~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
.... .....+++++.+.|+|||.+++.
T Consensus 149 ~~~~------~~~~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 149 DAAK------AQSKKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp ETTS------SSHHHHHHHHGGGEEEEEEEEEE
T ss_pred cCcH------HHHHHHHHHHHHhcCCCeEEEEe
Confidence 6432 23448999999999999988773
No 144
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.63 E-value=1.2e-15 Score=110.91 Aligned_cols=105 Identities=16% Similarity=0.210 Sum_probs=78.9
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhC--CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCC--CCCccE
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAM--NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIP--NPDWDL 81 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~fD~ 81 (175)
..++++|||||||+|..+..+++.. +.+|+++|+++.++ +.++++....+...++..+..+..+.++.. .++||+
T Consensus 61 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~-~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~ 139 (248)
T 3tfw_A 61 LTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHA-QVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDL 139 (248)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHH-HHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSE
T ss_pred hcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEE
Confidence 3467899999999999999998875 56899999999998 788888877776444444444332222222 348999
Q ss_pred EEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 82 ILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 82 i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
|++... ......+++++.++|+|||.+++.
T Consensus 140 V~~d~~------~~~~~~~l~~~~~~LkpGG~lv~~ 169 (248)
T 3tfw_A 140 IFIDAD------KPNNPHYLRWALRYSRPGTLIIGD 169 (248)
T ss_dssp EEECSC------GGGHHHHHHHHHHTCCTTCEEEEE
T ss_pred EEECCc------hHHHHHHHHHHHHhcCCCeEEEEe
Confidence 998543 234458999999999999988774
No 145
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.63 E-value=2.4e-15 Score=113.59 Aligned_cols=108 Identities=16% Similarity=0.147 Sum_probs=77.6
Q ss_pred CCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCC-CcceeeccCCCCCCC---CCCCccEEE
Q 030558 8 ERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITP-ALPHIKHSWGDAFPI---PNPDWDLIL 83 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~fD~i~ 83 (175)
++.+|||+|||+|.+++.+++. +.+|+++|+|+.++ +.+++|...+++.. ++..+..+..+..+. ..++||+|+
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~-ga~V~~VD~s~~al-~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii 230 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAA-GAEVTHVDASKKAI-GWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIIL 230 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT-TCEEEEECSCHHHH-HHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEE
T ss_pred CCCcEEEcccccCHHHHHHHHc-CCEEEEEECCHHHH-HHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEE
Confidence 4679999999999999999887 56999999999998 88888888777632 133333222111111 146899999
Q ss_pred eCCcccCc-------ccchHHHHHHHHHHhhcCCCCceeec
Q 030558 84 ASDILLYV-------KQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 84 ~~~~l~~~-------~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
+....+.. ....+...+++++.++|+|||.+++.
T Consensus 231 ~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~ 271 (332)
T 2igt_A 231 TDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVL 271 (332)
T ss_dssp ECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEE
T ss_pred ECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEE
Confidence 96553221 12345678999999999999987764
No 146
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.62 E-value=1.2e-15 Score=115.94 Aligned_cols=108 Identities=15% Similarity=0.199 Sum_probs=82.5
Q ss_pred cccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEe
Q 030558 5 EWIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILA 84 (175)
Q Consensus 5 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~ 84 (175)
...++++|||||||+|.++..+++....+|+|+|+|+ ++ +.++++...++...++..+..+..+ .+. +++||+|++
T Consensus 47 ~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~-~~a~~~~~~~~l~~~v~~~~~d~~~-~~~-~~~~D~Ivs 122 (348)
T 2y1w_A 47 TDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MA-QHAEVLVKSNNLTDRIVVIPGKVEE-VSL-PEQVDIIIS 122 (348)
T ss_dssp GGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HH-HHHHHHHHHTTCTTTEEEEESCTTT-CCC-SSCEEEEEE
T ss_pred ccCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HH-HHHHHHHHHcCCCCcEEEEEcchhh-CCC-CCceeEEEE
Confidence 3457899999999999999999887556899999996 76 7777777777764455555444432 222 358999999
Q ss_pred CCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 85 SDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 85 ~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
..+++++. .+.+...+.++.+.|+|||.+++.
T Consensus 123 ~~~~~~~~-~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 123 EPMGYMLF-NERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp CCCBTTBT-TTSHHHHHHHGGGGEEEEEEEESC
T ss_pred eCchhcCC-hHHHHHHHHHHHhhcCCCeEEEEe
Confidence 98875554 455668888999999999998876
No 147
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.62 E-value=6.5e-17 Score=116.82 Aligned_cols=103 Identities=12% Similarity=0.034 Sum_probs=78.0
Q ss_pred CCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCCc
Q 030558 8 ERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASDI 87 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~~ 87 (175)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.++ +.++.+....+...++..+..+..+.. .+++||+|+++.+
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~-~~~v~~vD~s~~~~-~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~D~v~~~~~ 153 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALT-GMRVIAIDIDPVKI-ALARNNAEVYGIADKIEFICGDFLLLA--SFLKADVVFLSPP 153 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHH-HHHHHHHHHTTCGGGEEEEESCHHHHG--GGCCCSEEEECCC
T ss_pred CCCEEEECccccCHHHHHHHHc-CCEEEEEECCHHHH-HHHHHHHHHcCCCcCeEEEECChHHhc--ccCCCCEEEECCC
Confidence 6889999999999999999887 68999999999998 788888777665333334333332221 4568999999988
Q ss_pred ccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 88 LLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 88 l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
+.+..... ..+.++.++|+|||.+++.
T Consensus 154 ~~~~~~~~---~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 154 WGGPDYAT---AETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp CSSGGGGG---SSSBCTTTSCSSCHHHHHH
T ss_pred cCCcchhh---hHHHHHHhhcCCcceeHHH
Confidence 74443322 4777899999999987765
No 148
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.62 E-value=2.9e-15 Score=110.38 Aligned_cols=102 Identities=15% Similarity=0.221 Sum_probs=75.9
Q ss_pred cccCCCcEEEeCCCccHHHHHHHHhC--CCcEEEEeCChHHHHHHHHHHHhhC-CCCCCcceeeccCCCCCCCCCCCccE
Q 030558 5 EWIERRRCIELGSGTGALAIFLRKAM--NLDITTSDYNDQEIEDNIAYNSTTN-GITPALPHIKHSWGDAFPIPNPDWDL 81 (175)
Q Consensus 5 ~~~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~~~D~s~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~fD~ 81 (175)
...++.+|||+|||+|.++..+++.. +.+|+++|+++.++ +.++++.... +. .++..+..+..+ ++.+++||+
T Consensus 107 ~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~-~~a~~~~~~~~g~-~~v~~~~~d~~~--~~~~~~fD~ 182 (275)
T 1yb2_A 107 GLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNL-KKAMDNLSEFYDI-GNVRTSRSDIAD--FISDQMYDA 182 (275)
T ss_dssp CCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHH-HHHHHHHHTTSCC-TTEEEECSCTTT--CCCSCCEEE
T ss_pred CCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHH-HHHHHHHHhcCCC-CcEEEEECchhc--cCcCCCccE
Confidence 34567899999999999999998862 67899999999998 7777777665 43 223333333322 344568999
Q ss_pred EEeCCcccCcccchHHHHHHHHHHhhcCCCCceeecc
Q 030558 82 ILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHL 118 (175)
Q Consensus 82 i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~ 118 (175)
|++. .++. ..+++++.++|+|||++++..
T Consensus 183 Vi~~-----~~~~---~~~l~~~~~~LkpgG~l~i~~ 211 (275)
T 1yb2_A 183 VIAD-----IPDP---WNHVQKIASMMKPGSVATFYL 211 (275)
T ss_dssp EEEC-----CSCG---GGSHHHHHHTEEEEEEEEEEE
T ss_pred EEEc-----CcCH---HHHHHHHHHHcCCCCEEEEEe
Confidence 9983 2323 388999999999999988864
No 149
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.61 E-value=1e-15 Score=116.13 Aligned_cols=106 Identities=10% Similarity=0.179 Sum_probs=81.7
Q ss_pred CCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCC
Q 030558 8 ERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASD 86 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~ 86 (175)
.+++|||+|||+|.++..+++.. ..+|+++|+|+.++ +.++++...++.. . .+..++..+..+++||+|+++.
T Consensus 196 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l-~~a~~~~~~~~~~--~---~~~~~d~~~~~~~~fD~Iv~~~ 269 (343)
T 2pjd_A 196 TKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAV-EASRATLAANGVE--G---EVFASNVFSEVKGRFDMIISNP 269 (343)
T ss_dssp CCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHH-HHHHHHHHHTTCC--C---EEEECSTTTTCCSCEEEEEECC
T ss_pred CCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHH-HHHHHHHHHhCCC--C---EEEEccccccccCCeeEEEECC
Confidence 46799999999999999998875 35899999999998 7778787776652 1 2233444444567999999998
Q ss_pred cccCc--ccchHHHHHHHHHHhhcCCCCceeeccc
Q 030558 87 ILLYV--KQYSNLIKSLSVLLKSYKPKDSQVGHLT 119 (175)
Q Consensus 87 ~l~~~--~~~~~~~~~l~~l~~~l~pgG~~~~~~~ 119 (175)
++++. ...+....+++++.++|+|||.+++...
T Consensus 270 ~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 270 PFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp CCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred CcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 87321 1345667999999999999999988643
No 150
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.61 E-value=6.4e-16 Score=110.49 Aligned_cols=101 Identities=11% Similarity=0.143 Sum_probs=75.8
Q ss_pred CcEEEeCCCccHHHHHHHHhC--CCcEEEEeCChHHHHHHHHHHHhhCCCC-CCcceeeccCCCCCC-CCCCCccEEEeC
Q 030558 10 RRCIELGSGTGALAIFLRKAM--NLDITTSDYNDQEIEDNIAYNSTTNGIT-PALPHIKHSWGDAFP-IPNPDWDLILAS 85 (175)
Q Consensus 10 ~~vLDlGcG~G~~~~~l~~~~--~~~v~~~D~s~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~fD~i~~~ 85 (175)
.+|||||||+|..++.+++.. +.+|+++|+++.++ +.++++....+.. .++..+..+..+.++ ..+++||+|++.
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~-~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d 136 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQ-RQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQ 136 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHH-HHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEEC
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEc
Confidence 489999999999999999865 57899999999998 8888888887763 233333322222222 236799999986
Q ss_pred CcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
... .+...+++++.+.|+|||.+++.
T Consensus 137 ~~~------~~~~~~l~~~~~~LkpGG~lv~d 162 (221)
T 3dr5_A 137 VSP------MDLKALVDAAWPLLRRGGALVLA 162 (221)
T ss_dssp CCT------TTHHHHHHHHHHHEEEEEEEEET
T ss_pred CcH------HHHHHHHHHHHHHcCCCcEEEEe
Confidence 432 23447899999999999988884
No 151
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.61 E-value=2.2e-15 Score=106.54 Aligned_cols=102 Identities=10% Similarity=0.063 Sum_probs=77.4
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeC
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILAS 85 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~ 85 (175)
..++.+|||+|||+|.++..+++. +.+|+++|+++.++ +.++++....+.. ++..+..+..+. ...+++||+|++.
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~la~~-~~~v~~vD~~~~~~-~~a~~~~~~~~~~-~v~~~~~d~~~~-~~~~~~~D~i~~~ 150 (210)
T 3lbf_A 75 LTPQSRVLEIGTGSGYQTAILAHL-VQHVCSVERIKGLQ-WQARRRLKNLDLH-NVSTRHGDGWQG-WQARAPFDAIIVT 150 (210)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHH-HHHHHHHHHTTCC-SEEEEESCGGGC-CGGGCCEEEEEES
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEecCHHHH-HHHHHHHHHcCCC-ceEEEECCcccC-CccCCCccEEEEc
Confidence 456889999999999999999988 88999999999998 7777777776652 233333333222 2235689999999
Q ss_pred CcccCcccchHHHHHHHHHHhhcCCCCceeecccc
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTK 120 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~ 120 (175)
.++.+.. +++.+.|+|||++++....
T Consensus 151 ~~~~~~~---------~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 151 AAPPEIP---------TALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp SBCSSCC---------THHHHTEEEEEEEEEEECS
T ss_pred cchhhhh---------HHHHHhcccCcEEEEEEcC
Confidence 8884443 2588999999999998655
No 152
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.61 E-value=8.1e-15 Score=120.15 Aligned_cols=111 Identities=14% Similarity=0.085 Sum_probs=80.3
Q ss_pred CCCcEEEeCCCccHHHHHHHHhCC--CcEEEEeCChHHHHHHHHHHHhhC--CCCCCcceeeccCCCC--CCCCCCCccE
Q 030558 8 ERRRCIELGSGTGALAIFLRKAMN--LDITTSDYNDQEIEDNIAYNSTTN--GITPALPHIKHSWGDA--FPIPNPDWDL 81 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~~--~~v~~~D~s~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~fD~ 81 (175)
++.+|||||||+|.++..+++..+ .+|+|+|+|+.|+ +.++++.... ........+.+..++. +++.+++||+
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emL-e~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDl 799 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGL-ARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDI 799 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHH-HHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHH-HHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeE
Confidence 688999999999999999988743 6899999999998 5655533321 1011223444444443 4556689999
Q ss_pred EEeCCcccCcccchHHHHHHHHHHhhcCCCCceeeccccC
Q 030558 82 ILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKN 121 (175)
Q Consensus 82 i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~ 121 (175)
|++..++.|.. .+....++++++++|+|| .+++.++..
T Consensus 800 VV~~eVLeHL~-dp~l~~~L~eI~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 800 GTCLEVIEHME-EDQACEFGEKVLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp EEEESCGGGSC-HHHHHHHHHHHHHTTCCS-EEEEEECBG
T ss_pred EEEeCchhhCC-hHHHHHHHHHHHHHcCCC-EEEEEecCc
Confidence 99999995554 345567999999999999 777765443
No 153
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.61 E-value=2.2e-16 Score=107.96 Aligned_cols=105 Identities=11% Similarity=0.129 Sum_probs=75.3
Q ss_pred CCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCC---CCCCCccEEEe
Q 030558 8 ERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFP---IPNPDWDLILA 84 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~fD~i~~ 84 (175)
++++|||+|||+|.++..+++. +.+|+++|+|+.++ +.++++....+. ++..+..+..+..+ ...++||+|++
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~-~~~v~~vD~~~~~~-~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~D~i~~ 116 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASE-GWEAVLVEKDPEAV-RLLKENVRRTGL--GARVVALPVEVFLPEAKAQGERFTVAFM 116 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHT-TCEEEEECCCHHHH-HHHHHHHHHHTC--CCEEECSCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHC-CCeEEEEeCCHHHH-HHHHHHHHHcCC--ceEEEeccHHHHHHhhhccCCceEEEEE
Confidence 6789999999999999999887 66699999999998 777777766554 23333333222111 11348999999
Q ss_pred CCcccCcccchHHHHHHHHHH--hhcCCCCceeeccccC
Q 030558 85 SDILLYVKQYSNLIKSLSVLL--KSYKPKDSQVGHLTKN 121 (175)
Q Consensus 85 ~~~l~~~~~~~~~~~~l~~l~--~~l~pgG~~~~~~~~~ 121 (175)
+.++ + ...+ .+++.+. ++|+|||.+++.....
T Consensus 117 ~~~~-~-~~~~---~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 117 APPY-A-MDLA---ALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp CCCT-T-SCTT---HHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred CCCC-c-hhHH---HHHHHHHhhcccCCCcEEEEEeCCc
Confidence 8875 3 4344 5556665 9999999998875544
No 154
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.61 E-value=1.1e-15 Score=117.13 Aligned_cols=106 Identities=14% Similarity=0.160 Sum_probs=76.6
Q ss_pred cccCCCcEEEeCCCccHHHHHHHHhCCCc-EEEEeCChHHHHHHHHHHH-------hhCCCCCCcceeeccCCCCCC--C
Q 030558 5 EWIERRRCIELGSGTGALAIFLRKAMNLD-ITTSDYNDQEIEDNIAYNS-------TTNGITPALPHIKHSWGDAFP--I 74 (175)
Q Consensus 5 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~-v~~~D~s~~~l~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~--~ 74 (175)
...++.+|||||||+|.+++.++...+.. |+|+|+++.++ +.++++. ...+.. ...+.+..+|... +
T Consensus 170 ~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~l-elAr~n~e~frkr~~~~Gl~--~~rVefi~GD~~~lp~ 246 (438)
T 3uwp_A 170 KMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPA-KYAETMDREFRKWMKWYGKK--HAEYTLERGDFLSEEW 246 (438)
T ss_dssp CCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHH-HHHHHHHHHHHHHHHHHTBC--CCEEEEEECCTTSHHH
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHH-HHHHHHHHHHHHHHHHhCCC--CCCeEEEECcccCCcc
Confidence 34578999999999999999998876665 99999999887 4444432 222331 1234444455433 2
Q ss_pred CC--CCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 75 PN--PDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 75 ~~--~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
.+ ..||+|+++..+ +. +++...|+++++.|||||++++.
T Consensus 247 ~d~~~~aDVVf~Nn~~-F~---pdl~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 247 RERIANTSVIFVNNFA-FG---PEVDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp HHHHHTCSEEEECCTT-CC---HHHHHHHHHHHTTSCTTCEEEES
T ss_pred ccccCCccEEEEcccc-cC---chHHHHHHHHHHcCCCCcEEEEe
Confidence 22 479999998775 43 45668899999999999999988
No 155
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.60 E-value=4.7e-15 Score=107.90 Aligned_cols=127 Identities=14% Similarity=0.175 Sum_probs=89.3
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhC--CCcEEEEeCChHHHHHHHHHHHhhC-CCCCCcceeeccCCCCCCCCCCCccEE
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAM--NLDITTSDYNDQEIEDNIAYNSTTN-GITPALPHIKHSWGDAFPIPNPDWDLI 82 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~~~D~s~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~fD~i 82 (175)
..++.+|||+|||+|.++..+++.. +.+|+++|+++.++ +.++++.... +. .++.....+..+ .++.+++||+|
T Consensus 94 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~-~~a~~~~~~~~g~-~~v~~~~~d~~~-~~~~~~~~D~v 170 (258)
T 2pwy_A 94 LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHL-AQAERNVRAFWQV-ENVRFHLGKLEE-AELEEAAYDGV 170 (258)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHH-HHHHHHHHHHCCC-CCEEEEESCGGG-CCCCTTCEEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHH-HHHHHHHHHhcCC-CCEEEEECchhh-cCCCCCCcCEE
Confidence 4578899999999999999998873 57899999999998 7777666554 42 233444333322 23456789999
Q ss_pred EeCCcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCee
Q 030558 83 LASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEV 162 (175)
Q Consensus 83 ~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 162 (175)
++. .++. ..+++++.++|+|||.+++..+.. .....+.+.++++||..
T Consensus 171 ~~~-----~~~~---~~~l~~~~~~L~~gG~l~~~~~~~------------------------~~~~~~~~~l~~~gf~~ 218 (258)
T 2pwy_A 171 ALD-----LMEP---WKVLEKAALALKPDRFLVAYLPNI------------------------TQVLELVRAAEAHPFRL 218 (258)
T ss_dssp EEE-----SSCG---GGGHHHHHHHEEEEEEEEEEESCH------------------------HHHHHHHHHHTTTTEEE
T ss_pred EEC-----CcCH---HHHHHHHHHhCCCCCEEEEEeCCH------------------------HHHHHHHHHHHHCCCce
Confidence 983 1222 388999999999999888853221 01256667788888875
Q ss_pred EEecc
Q 030558 163 KHLGS 167 (175)
Q Consensus 163 ~~~~~ 167 (175)
.+..+
T Consensus 219 ~~~~~ 223 (258)
T 2pwy_A 219 ERVLE 223 (258)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55443
No 156
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.60 E-value=1.4e-14 Score=106.47 Aligned_cols=131 Identities=12% Similarity=0.052 Sum_probs=92.8
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCC-CCCCccEEEeC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPI-PNPDWDLILAS 85 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~fD~i~~~ 85 (175)
.+|.+|||+|||+|.+++.+|+.++.+|+++|+|+.++ +.+++|...|++...+..+..+. ..+ ..+.||.|++.
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~-~~~~~N~~~N~v~~~v~~~~~D~---~~~~~~~~~D~Vi~~ 199 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTF-KFLVENIHLNKVEDRMSAYNMDN---RDFPGENIADRILMG 199 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHH-HHHHHHHHHTTCTTTEEEECSCT---TTCCCCSCEEEEEEC
T ss_pred CCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHH-HHHHHHHHHcCCCCcEEEEeCcH---HHhccccCCCEEEEC
Confidence 46899999999999999999998667899999999998 99999999999865555544333 332 34689999987
Q ss_pred CcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCeeEEe
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVKHL 165 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 165 (175)
... . .. ..+..+.++++|||.+.+.. ............+.+.+.+++.|++++.+
T Consensus 200 ~p~-~---~~---~~l~~a~~~lk~gG~ih~~~------------------~~~e~~~~~~~~e~i~~~~~~~g~~v~~~ 254 (278)
T 3k6r_A 200 YVV-R---TH---EFIPKALSIAKDGAIIHYHN------------------TVPEKLMPREPFETFKRITKEYGYDVEKL 254 (278)
T ss_dssp CCS-S---GG---GGHHHHHHHEEEEEEEEEEE------------------EEEGGGTTTTTHHHHHHHHHHTTCEEEEE
T ss_pred CCC-c---HH---HHHHHHHHHcCCCCEEEEEe------------------eecccccchhHHHHHHHHHHHcCCcEEEE
Confidence 553 1 12 56777889999999654420 00011111112366778888999886654
Q ss_pred c
Q 030558 166 G 166 (175)
Q Consensus 166 ~ 166 (175)
.
T Consensus 255 ~ 255 (278)
T 3k6r_A 255 N 255 (278)
T ss_dssp E
T ss_pred E
Confidence 3
No 157
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.60 E-value=4e-15 Score=106.97 Aligned_cols=105 Identities=8% Similarity=0.025 Sum_probs=73.0
Q ss_pred cccCCCcEEEeCCCccHHHHHHHHhC--CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCC--CCCCCCCcc
Q 030558 5 EWIERRRCIELGSGTGALAIFLRKAM--NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDA--FPIPNPDWD 80 (175)
Q Consensus 5 ~~~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~fD 80 (175)
...++.+|||+|||+|.++..+++.. +.+|+++|+|+.++ +.+.++...+ ..+..+..+..+. ++..+++||
T Consensus 74 ~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i-~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~~~~~D 149 (233)
T 2ipx_A 74 HIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSG-RDLINLAKKR---TNIIPVIEDARHPHKYRMLIAMVD 149 (233)
T ss_dssp CCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHH-HHHHHHHHHC---TTEEEECSCTTCGGGGGGGCCCEE
T ss_pred cCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHH-HHHHHHhhcc---CCeEEEEcccCChhhhcccCCcEE
Confidence 34568899999999999999999874 46899999999887 3333333332 1223333333321 233467899
Q ss_pred EEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeecc
Q 030558 81 LILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHL 118 (175)
Q Consensus 81 ~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~ 118 (175)
+|++... .......++.++.+.|+|||.+++..
T Consensus 150 ~V~~~~~-----~~~~~~~~~~~~~~~LkpgG~l~i~~ 182 (233)
T 2ipx_A 150 VIFADVA-----QPDQTRIVALNAHTFLRNGGHFVISI 182 (233)
T ss_dssp EEEECCC-----CTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEcCC-----CccHHHHHHHHHHHHcCCCeEEEEEE
Confidence 9999544 23333467889999999999998853
No 158
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.60 E-value=2e-15 Score=109.84 Aligned_cols=101 Identities=17% Similarity=0.136 Sum_probs=76.7
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhC--CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEE
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAM--NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLIL 83 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~ 83 (175)
..++.+|||+|||+|.++..+++.. +.+|+++|+++.++ +.++++....+...++..+..+..+. +.+++||+|+
T Consensus 91 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~D~v~ 167 (255)
T 3mb5_A 91 ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFA-KLAWENIKWAGFDDRVTIKLKDIYEG--IEEENVDHVI 167 (255)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHH-HHHHHHHHHHTCTTTEEEECSCGGGC--CCCCSEEEEE
T ss_pred CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHH-HHHHHHHHHcCCCCceEEEECchhhc--cCCCCcCEEE
Confidence 4568899999999999999998873 67899999999998 77777777666533344444333322 4566899999
Q ss_pred eCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 84 ASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 84 ~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
++. +.. ..+++++.++|+|||.+++.
T Consensus 168 ~~~-----~~~---~~~l~~~~~~L~~gG~l~~~ 193 (255)
T 3mb5_A 168 LDL-----PQP---ERVVEHAAKALKPGGFFVAY 193 (255)
T ss_dssp ECS-----SCG---GGGHHHHHHHEEEEEEEEEE
T ss_pred ECC-----CCH---HHHHHHHHHHcCCCCEEEEE
Confidence 842 222 37899999999999988875
No 159
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.60 E-value=4.5e-15 Score=115.16 Aligned_cols=105 Identities=19% Similarity=0.250 Sum_probs=76.7
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCC-CcEEEEeCChHHHHHHH-------HHHHhhCCCCCCcceeeccCCCCCC----
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMN-LDITTSDYNDQEIEDNI-------AYNSTTNGITPALPHIKHSWGDAFP---- 73 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~~~D~s~~~l~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~---- 73 (175)
..++.+|||||||+|.+++.+++..+ .+|+|+|+++.++ +.+ +.+....+.. ...+.+..++...
T Consensus 240 l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l-~~A~~Ml~~ar~~~~~~Gl~--~~nV~~i~gD~~~~~~~ 316 (433)
T 1u2z_A 240 LKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDAS-DLTILQYEELKKRCKLYGMR--LNNVEFSLKKSFVDNNR 316 (433)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHH-HHHHHHHHHHHHHHHHTTBC--CCCEEEEESSCSTTCHH
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHH-HHHHHhHHHHHHHHHHcCCC--CCceEEEEcCccccccc
Confidence 34688999999999999999998654 4699999999987 555 6666665531 1233333332221
Q ss_pred C--CCCCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 74 I--PNPDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 74 ~--~~~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
+ ..++||+|+++.++ +. +++..+++++.++|||||++++.
T Consensus 317 ~~~~~~~FDvIvvn~~l-~~---~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 317 VAELIPQCDVILVNNFL-FD---EDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp HHHHGGGCSEEEECCTT-CC---HHHHHHHHHHHTTCCTTCEEEES
T ss_pred cccccCCCCEEEEeCcc-cc---ccHHHHHHHHHHhCCCCeEEEEe
Confidence 1 24689999998776 32 45568899999999999999887
No 160
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.60 E-value=9.8e-16 Score=111.33 Aligned_cols=109 Identities=15% Similarity=0.021 Sum_probs=75.2
Q ss_pred CCCcEEEeCCCccHHHHHHHHh--C-CCcEEEEeCChHHHHHHHHHHHhhC---CCCCC---------------------
Q 030558 8 ERRRCIELGSGTGALAIFLRKA--M-NLDITTSDYNDQEIEDNIAYNSTTN---GITPA--------------------- 60 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~--~-~~~v~~~D~s~~~l~~~~~~~~~~~---~~~~~--------------------- 60 (175)
++.+|||+|||+|.++..+++. . +.+|+|+|+|+.++ +.++++.... +....
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l-~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPL-ELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQ 129 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHH-HHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHH-HHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhh
Confidence 4678999999999999999886 2 56899999999998 6666665543 22000
Q ss_pred ----cc-------------eeeccCCCCCCC----CCCCccEEEeCCcccCccc------chHHHHHHHHHHhhcCCCCc
Q 030558 61 ----LP-------------HIKHSWGDAFPI----PNPDWDLILASDILLYVKQ------YSNLIKSLSVLLKSYKPKDS 113 (175)
Q Consensus 61 ----~~-------------~~~~~~~~~~~~----~~~~fD~i~~~~~l~~~~~------~~~~~~~l~~l~~~l~pgG~ 113 (175)
+. ....+..+..+. ..++||+|+++..+..... .+....+++++.++|+|||.
T Consensus 130 ~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 209 (250)
T 1o9g_A 130 AARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAV 209 (250)
T ss_dssp HHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCE
T ss_pred hhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcE
Confidence 12 222222221110 2348999999876533222 24567999999999999999
Q ss_pred eeec
Q 030558 114 QVGH 117 (175)
Q Consensus 114 ~~~~ 117 (175)
++++
T Consensus 210 l~~~ 213 (250)
T 1o9g_A 210 IAVT 213 (250)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9984
No 161
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.59 E-value=4e-15 Score=104.90 Aligned_cols=99 Identities=13% Similarity=0.128 Sum_probs=75.4
Q ss_pred CCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCC
Q 030558 8 ERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASD 86 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~ 86 (175)
++.+|||+|||+|.++..+++.. +.+|+++|+|+.++ +.++++....+.. .+..+..++.+.. ..++||+|++..
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~-~~a~~~~~~~~~~-~v~~~~~d~~~~~--~~~~~D~i~~~~ 140 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRV-RFLRQVQHELKLE-NIEPVQSRVEEFP--SEPPFDGVISRA 140 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHH-HHHHHHHHHTTCS-SEEEEECCTTTSC--CCSCEEEEECSC
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHH-HHHHHHHHHcCCC-CeEEEecchhhCC--ccCCcCEEEEec
Confidence 47899999999999999998864 67899999999998 7777777776652 2334433333222 346899999864
Q ss_pred cccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 87 ILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 87 ~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
+ . ++..+++++.+.|+|||.+++.
T Consensus 141 ~----~---~~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 141 F----A---SLNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp S----S---SHHHHHHHHTTSEEEEEEEEEE
T ss_pred c----C---CHHHHHHHHHHhcCCCcEEEEE
Confidence 3 2 3449999999999999988885
No 162
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.58 E-value=2.4e-15 Score=107.29 Aligned_cols=104 Identities=17% Similarity=0.184 Sum_probs=77.1
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhC--CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCC-C---CCCCcc
Q 030558 7 IERRRCIELGSGTGALAIFLRKAM--NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFP-I---PNPDWD 80 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~fD 80 (175)
.++++|||||||+|..+..+++.. +.+|+++|+++.++ +.++++....+...++..+..+..+.++ . ..++||
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD 135 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHA-DIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFD 135 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHH-HHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCS
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcC
Confidence 467899999999999999998875 56899999999998 7778787776664334444433322111 1 125799
Q ss_pred EEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 81 LILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 81 ~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
+|++.... +....+++++.++|+|||.+++.
T Consensus 136 ~v~~d~~~------~~~~~~l~~~~~~L~pgG~lv~~ 166 (223)
T 3duw_A 136 FIFIDADK------QNNPAYFEWALKLSRPGTVIIGD 166 (223)
T ss_dssp EEEECSCG------GGHHHHHHHHHHTCCTTCEEEEE
T ss_pred EEEEcCCc------HHHHHHHHHHHHhcCCCcEEEEe
Confidence 99986542 23448999999999999977774
No 163
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.58 E-value=7e-16 Score=109.03 Aligned_cols=105 Identities=12% Similarity=0.140 Sum_probs=61.3
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCC-----CCcc
Q 030558 7 IERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPN-----PDWD 80 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~fD 80 (175)
.++.+|||+|||+|.++..+++.. +.+|+++|+|+.++ +.++++...++. ++..+..+..+ ++.+ ++||
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~-~~a~~~~~~~~~--~~~~~~~d~~~--~~~~~~~~~~~fD 103 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDAL-AVARRNAERFGA--VVDWAAADGIE--WLIERAERGRPWH 103 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC----------------------CCHHHHHH--HHHHHHHTTCCBS
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHH-HHHHHHHHHhCC--ceEEEEcchHh--hhhhhhhccCccc
Confidence 467899999999999999999875 45899999999998 677666655443 22333333222 2223 7899
Q ss_pred EEEeCCcccCcccc-----------------------hHHHHHHHHHHhhcCCCCc-eee
Q 030558 81 LILASDILLYVKQY-----------------------SNLIKSLSVLLKSYKPKDS-QVG 116 (175)
Q Consensus 81 ~i~~~~~l~~~~~~-----------------------~~~~~~l~~l~~~l~pgG~-~~~ 116 (175)
+|+++..++..... .....+++++.++|+|||+ +++
T Consensus 104 ~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 163 (215)
T 4dzr_A 104 AIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFL 163 (215)
T ss_dssp EEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEE
T ss_pred EEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 99997665322211 0115888999999999998 444
No 164
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.58 E-value=1.9e-15 Score=108.63 Aligned_cols=104 Identities=12% Similarity=0.157 Sum_probs=78.7
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCC--CCCccEEE
Q 030558 7 IERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIP--NPDWDLIL 83 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~fD~i~ 83 (175)
.++.+|||+|||+|..+..+++.. +.+|+++|+++.++ +.++++....+...++..+..+..+..+.. +++||+|+
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~ 131 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRY-EEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLF 131 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHH-HHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEE
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHH-HHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEE
Confidence 467899999999999999998876 57899999999998 777777777665333444433332222222 46899999
Q ss_pred eCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 84 ASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 84 ~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
+.... . +...+++++.+.|+|||.+++.
T Consensus 132 ~~~~~---~---~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 132 IDAAK---G---QYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp EEGGG---S---CHHHHHHHHGGGEEEEEEEEEE
T ss_pred ECCCH---H---HHHHHHHHHHHHcCCCeEEEEE
Confidence 87554 2 4458999999999999998886
No 165
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.58 E-value=5e-15 Score=108.86 Aligned_cols=109 Identities=15% Similarity=0.219 Sum_probs=74.7
Q ss_pred CCcEEEeCCCccH----HHHHHHHhCC-----CcEEEEeCChHHHHHHHHHHHhh-----------------------CC
Q 030558 9 RRRCIELGSGTGA----LAIFLRKAMN-----LDITTSDYNDQEIEDNIAYNSTT-----------------------NG 56 (175)
Q Consensus 9 ~~~vLDlGcG~G~----~~~~l~~~~~-----~~v~~~D~s~~~l~~~~~~~~~~-----------------------~~ 56 (175)
+.+|+|+|||||. +++.+++..+ .+|+|+|+|+.|| +.++++... .+
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L-~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVL-EKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHH-HHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHH-HHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 4689999999998 5666666522 5899999999999 666554310 00
Q ss_pred -C------CCCcceeeccCCCCCCCC-CCCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeecccc
Q 030558 57 -I------TPALPHIKHSWGDAFPIP-NPDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTK 120 (175)
Q Consensus 57 -~------~~~~~~~~~~~~~~~~~~-~~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~ 120 (175)
. ...+.+...++.+ .+++ .++||+|+|.+++.|. +.+...++++++++.|+|||.+++...+
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~-~~~~~~~~fDlI~crnvliyf-~~~~~~~vl~~~~~~L~pgG~L~lg~sE 254 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLE-KQYNVPGPFDAIFCRNVMIYF-DKTTQEDILRRFVPLLKPDGLLFAGHSE 254 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTC-SSCCCCCCEEEEEECSSGGGS-CHHHHHHHHHHHGGGEEEEEEEEECTTC
T ss_pred ceeechhhcccCeEEecccCC-CCCCcCCCeeEEEECCchHhC-CHHHHHHHHHHHHHHhCCCcEEEEEecc
Confidence 0 0122333333333 2233 4689999999998555 3566789999999999999999886433
No 166
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.58 E-value=1.1e-14 Score=104.23 Aligned_cols=103 Identities=11% Similarity=0.013 Sum_probs=72.8
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhC--CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCC--CCCCCCccE
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAM--NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAF--PIPNPDWDL 81 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~fD~ 81 (175)
..++.+|||+|||+|.++..+++.. +.+|+++|+|+.++ +.+..+.... .++..+..+..+.. ....++||+
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~-~~~~~~~~~~---~~v~~~~~d~~~~~~~~~~~~~~D~ 146 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVL-RELVPIVEER---RNIVPILGDATKPEEYRALVPKVDV 146 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHH-HHHHHHHSSC---TTEEEEECCTTCGGGGTTTCCCEEE
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHH-HHHHHHHhcc---CCCEEEEccCCCcchhhcccCCceE
Confidence 4568899999999999999998874 36899999999998 5555555443 23344444433311 122458999
Q ss_pred EEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 82 ILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 82 i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
|++... .......+++++.++|+|||.+++.
T Consensus 147 v~~~~~-----~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 147 IFEDVA-----QPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp EEECCC-----STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEECCC-----CHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 997644 1223335599999999999998886
No 167
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.58 E-value=1.2e-15 Score=108.95 Aligned_cols=104 Identities=16% Similarity=0.122 Sum_probs=77.7
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhC--CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCC-----CCCCc
Q 030558 7 IERRRCIELGSGTGALAIFLRKAM--NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPI-----PNPDW 79 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~f 79 (175)
.++++|||+|||+|..+..+++.. +.+|+++|+++.++ +.++++....+...++..+..+..+.++. ..++|
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 141 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKST-ALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQY 141 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHH-HHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCE
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHH-HHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCc
Confidence 467899999999999999998864 57899999999998 78888887777643344444333222111 12789
Q ss_pred cEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 80 DLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 80 D~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
|+|++... ......+++++.++|+|||.+++.
T Consensus 142 D~v~~~~~------~~~~~~~l~~~~~~L~pgG~lv~~ 173 (225)
T 3tr6_A 142 DLIYIDAD------KANTDLYYEESLKLLREGGLIAVD 173 (225)
T ss_dssp EEEEECSC------GGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred cEEEECCC------HHHHHHHHHHHHHhcCCCcEEEEe
Confidence 99997543 234558999999999999988874
No 168
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.58 E-value=3.2e-15 Score=117.87 Aligned_cols=107 Identities=15% Similarity=0.201 Sum_probs=82.9
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeC
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILAS 85 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~ 85 (175)
..++++|||||||+|.+++.+++....+|+|+|+|+ ++ +.++++...+++..++..+..++.+ .+. +++||+|++.
T Consensus 156 ~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l-~~A~~~~~~~gl~~~v~~~~~d~~~-~~~-~~~fD~Ivs~ 231 (480)
T 3b3j_A 156 DFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MA-QHAEVLVKSNNLTDRIVVIPGKVEE-VSL-PEQVDIIISE 231 (480)
T ss_dssp GTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HH-HHHHHHHHHTTCTTTEEEEESCTTT-CCC-SSCEEEEECC
T ss_pred hcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HH-HHHHHHHHHcCCCCcEEEEECchhh-Ccc-CCCeEEEEEe
Confidence 346789999999999999999887566899999998 87 7788888877775555555555433 222 3589999998
Q ss_pred CcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
.+++++. .+.+...+.++.+.|+|||.+++.
T Consensus 232 ~~~~~~~-~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 232 PMGYMLF-NERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp CCHHHHT-CHHHHHHHHHGGGGEEEEEEEESC
T ss_pred CchHhcC-cHHHHHHHHHHHHhcCCCCEEEEE
Confidence 8875554 455667888899999999988865
No 169
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.57 E-value=7.4e-15 Score=108.24 Aligned_cols=125 Identities=12% Similarity=0.086 Sum_probs=87.9
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhC--CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEE
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAM--NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLIL 83 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~ 83 (175)
..++.+|||+|||+|.++..+++.. +.+|+++|+++.++ +.++++....+...++..+..+..+. +.+++||+|+
T Consensus 110 ~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~D~V~ 186 (277)
T 1o54_A 110 VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFA-KLAESNLTKWGLIERVTIKVRDISEG--FDEKDVDALF 186 (277)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHH-HHHHHHHHHTTCGGGEEEECCCGGGC--CSCCSEEEEE
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHH-HHHHHHHHHcCCCCCEEEEECCHHHc--ccCCccCEEE
Confidence 4467899999999999999998874 57899999999998 77777777655422333333333222 3456899999
Q ss_pred eCCcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCeeE
Q 030558 84 ASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVK 163 (175)
Q Consensus 84 ~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 163 (175)
+.. +.. ..+++++.++|+|||.+++..+.. .....+.+.++++||...
T Consensus 187 ~~~-----~~~---~~~l~~~~~~L~pgG~l~~~~~~~------------------------~~~~~~~~~l~~~gf~~~ 234 (277)
T 1o54_A 187 LDV-----PDP---WNYIDKCWEALKGGGRFATVCPTT------------------------NQVQETLKKLQELPFIRI 234 (277)
T ss_dssp ECC-----SCG---GGTHHHHHHHEEEEEEEEEEESSH------------------------HHHHHHHHHHHHSSEEEE
T ss_pred ECC-----cCH---HHHHHHHHHHcCCCCEEEEEeCCH------------------------HHHHHHHHHHHHCCCcee
Confidence 842 222 388999999999999888853211 012556677777888755
Q ss_pred Ee
Q 030558 164 HL 165 (175)
Q Consensus 164 ~~ 165 (175)
+.
T Consensus 235 ~~ 236 (277)
T 1o54_A 235 EV 236 (277)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 170
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.57 E-value=9.3e-15 Score=104.74 Aligned_cols=101 Identities=8% Similarity=0.080 Sum_probs=74.6
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeC
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILAS 85 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~ 85 (175)
..++.+|||+|||+|.++..+++. +.+|+++|+++.++ +.++++....+ .+..+..+..+..+ .+++||+|++.
T Consensus 68 ~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~-~~a~~~~~~~~---~v~~~~~d~~~~~~-~~~~fD~v~~~ 141 (231)
T 1vbf_A 68 LHKGQKVLEIGTGIGYYTALIAEI-VDKVVSVEINEKMY-NYASKLLSYYN---NIKLILGDGTLGYE-EEKPYDRVVVW 141 (231)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHH-HHHHHHHTTCS---SEEEEESCGGGCCG-GGCCEEEEEES
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHH-cCEEEEEeCCHHHH-HHHHHHHhhcC---CeEEEECCcccccc-cCCCccEEEEC
Confidence 346789999999999999999887 58999999999998 67666655433 23333333322222 35689999999
Q ss_pred CcccCcccchHHHHHHHHHHhhcCCCCceeeccccC
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKN 121 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~ 121 (175)
.++++.. +++.++|+|||++++.....
T Consensus 142 ~~~~~~~---------~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 142 ATAPTLL---------CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp SBBSSCC---------HHHHHTEEEEEEEEEEECSS
T ss_pred CcHHHHH---------HHHHHHcCCCcEEEEEEcCC
Confidence 9884433 36889999999999985443
No 171
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.57 E-value=4.8e-15 Score=107.63 Aligned_cols=104 Identities=14% Similarity=0.082 Sum_probs=76.4
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhC--CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCC------CCCC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAM--NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPI------PNPD 78 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 78 (175)
.++++|||||||+|..++.+++.. +.+|+++|+++.++ +.++++....+...++..+..+..+.++. .+++
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~-~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~ 156 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENY-ELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGS 156 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHH-HHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTC
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCC
Confidence 467899999999999999999875 57899999999998 77787777766532333332222121221 1578
Q ss_pred ccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 79 WDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 79 fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
||+|++.... ......++++.++|+|||.+++.
T Consensus 157 fD~V~~d~~~------~~~~~~l~~~~~~LkpGG~lv~d 189 (247)
T 1sui_A 157 YDFIFVDADK------DNYLNYHKRLIDLVKVGGVIGYD 189 (247)
T ss_dssp BSEEEECSCS------TTHHHHHHHHHHHBCTTCCEEEE
T ss_pred EEEEEEcCch------HHHHHHHHHHHHhCCCCeEEEEe
Confidence 9999986432 23458999999999999988874
No 172
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.57 E-value=7.4e-15 Score=105.89 Aligned_cols=108 Identities=9% Similarity=-0.007 Sum_probs=72.3
Q ss_pred CCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhh------CCCCCCcceeeccCCCCCC--CCCCC
Q 030558 8 ERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTT------NGITPALPHIKHSWGDAFP--IPNPD 78 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~--~~~~~ 78 (175)
++.+|||||||+|.++..+|+.. +.+|+|+|+|+.|+ +.++++... .+. .++..+..+..+.++ +.+++
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l-~~A~~~~~~l~~~~~~~~-~nv~~~~~d~~~~l~~~~~~~~ 123 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVS-DYVQDRIRALRAAPAGGF-QNIACLRSNAMKHLPNFFYKGQ 123 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHH-HHHHHHHHHHHHSTTCCC-TTEEEEECCTTTCHHHHCCTTC
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHH-HHHHHHHHHHHHHHhcCC-CeEEEEECcHHHhhhhhCCCcC
Confidence 45689999999999999998875 56899999999998 555544332 222 233333333333233 56789
Q ss_pred ccEEEeCCcccCcccc--h----HHHHHHHHHHhhcCCCCceeecc
Q 030558 79 WDLILASDILLYVKQY--S----NLIKSLSVLLKSYKPKDSQVGHL 118 (175)
Q Consensus 79 fD~i~~~~~l~~~~~~--~----~~~~~l~~l~~~l~pgG~~~~~~ 118 (175)
||.|++...- .+... . ....+++++.++|+|||.+++.+
T Consensus 124 ~D~v~~~~~d-p~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~t 168 (235)
T 3ckk_A 124 LTKMFFLFPD-PHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTIT 168 (235)
T ss_dssp EEEEEEESCC------------CCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeEEEEeCCC-chhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEe
Confidence 9999875332 11100 0 01379999999999999999874
No 173
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.57 E-value=7e-15 Score=109.85 Aligned_cols=136 Identities=11% Similarity=0.033 Sum_probs=85.3
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhh---CCCCCCcceeeccCCCCCCC-CCCCccE
Q 030558 7 IERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTT---NGITPALPHIKHSWGDAFPI-PNPDWDL 81 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~fD~ 81 (175)
.++++|||||||+|..+..+++.. ..+|+++|+++.++ +.++++... .....++..+..+..+.... .+++||+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i-~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDv 172 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVM-EQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDV 172 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHH-HHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeE
Confidence 356899999999999999998764 46899999999998 666655421 11111222222222111111 3678999
Q ss_pred EEeCCcccCcccchHH--HHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcC
Q 030558 82 ILASDILLYVKQYSNL--IKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAG 159 (175)
Q Consensus 82 i~~~~~l~~~~~~~~~--~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 159 (175)
|++.......+ ...+ ..+++++.++|+|||.+++..... +........+.+.++++|
T Consensus 173 Ii~d~~~~~~~-~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~--------------------~~~~~~~~~~~~~l~~~G 231 (304)
T 3bwc_A 173 VIIDTTDPAGP-ASKLFGEAFYKDVLRILKPDGICCNQGESI--------------------WLDLELIEKMSRFIRETG 231 (304)
T ss_dssp EEEECC----------CCHHHHHHHHHHEEEEEEEEEEECCT--------------------TTCHHHHHHHHHHHHHHT
T ss_pred EEECCCCcccc-chhhhHHHHHHHHHHhcCCCcEEEEecCCc--------------------ccchHHHHHHHHHHHhCC
Confidence 99965542211 1112 488999999999999888852211 111123477888899999
Q ss_pred CeeEE
Q 030558 160 LEVKH 164 (175)
Q Consensus 160 ~~~~~ 164 (175)
|....
T Consensus 232 F~~v~ 236 (304)
T 3bwc_A 232 FASVQ 236 (304)
T ss_dssp CSEEE
T ss_pred CCcEE
Confidence 97554
No 174
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.57 E-value=1.7e-15 Score=107.21 Aligned_cols=103 Identities=10% Similarity=0.065 Sum_probs=74.8
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhC--CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEe
Q 030558 7 IERRRCIELGSGTGALAIFLRKAM--NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILA 84 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~ 84 (175)
.++++|||+|||+|..+..+++.. +.+|+++|+++.++ +.++++....+...++..+..+..+.++..++ ||+|++
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~ 132 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNV-EHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFM 132 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHH-HHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEE
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEE
Confidence 467899999999999999998865 56899999999998 77777766555422233333333222233345 999998
Q ss_pred CCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 85 SDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 85 ~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
... ......+++++.++|+|||.+++.
T Consensus 133 ~~~------~~~~~~~l~~~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 133 DCD------VFNGADVLERMNRCLAKNALLIAV 159 (210)
T ss_dssp ETT------TSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred cCC------hhhhHHHHHHHHHhcCCCeEEEEE
Confidence 633 223458999999999999988874
No 175
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.56 E-value=7.1e-15 Score=112.56 Aligned_cols=147 Identities=14% Similarity=0.125 Sum_probs=93.5
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEe
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILA 84 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~ 84 (175)
..++.+|||||||+|..+..+++.. +.+++++|+ +.++ +.++. ..++..+..+..+ +.+. . |+|++
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~-~~a~~-------~~~v~~~~~d~~~--~~p~-~-D~v~~ 267 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVI-QDAPA-------FSGVEHLGGDMFD--GVPK-G-DAIFI 267 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHH-TTCCC-------CTTEEEEECCTTT--CCCC-C-SEEEE
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHH-Hhhhh-------cCCCEEEecCCCC--CCCC-C-CEEEE
Confidence 3456899999999999999998875 567999999 7776 33221 1233444444333 3333 3 99999
Q ss_pred CCcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCC-----CCceEeeeeccCCCcchhHHHHHHHHcC
Q 030558 85 SDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLP-----WPAFLMSWRRRIGKEDETIFFTSCENAG 159 (175)
Q Consensus 85 ~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~g 159 (175)
..+++++. .++...++++++++|+|||++++............... ...............+.+++.++++++|
T Consensus 268 ~~vlh~~~-~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~AG 346 (368)
T 3reo_A 268 KWICHDWS-DEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASG 346 (368)
T ss_dssp ESCGGGBC-HHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHHHTT
T ss_pred echhhcCC-HHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHHHCC
Confidence 99996565 45677999999999999999998744332221110000 0000000000011124589999999999
Q ss_pred CeeEEec
Q 030558 160 LEVKHLG 166 (175)
Q Consensus 160 ~~~~~~~ 166 (175)
|++.++.
T Consensus 347 F~~v~~~ 353 (368)
T 3reo_A 347 FRGFKVA 353 (368)
T ss_dssp CCEEEEE
T ss_pred CeeeEEE
Confidence 9876663
No 176
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.56 E-value=9.2e-15 Score=111.77 Aligned_cols=147 Identities=14% Similarity=0.071 Sum_probs=93.8
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEe
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILA 84 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~ 84 (175)
..++.+|||||||+|..+..+++.. +.+++++|+ +.++ +.++. ..++..+..+..+ +++.+ |+|++
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~-~~a~~-------~~~v~~~~~D~~~--~~p~~--D~v~~ 265 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVI-SEAPQ-------FPGVTHVGGDMFK--EVPSG--DTILM 265 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHH-TTCCC-------CTTEEEEECCTTT--CCCCC--SEEEE
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHH-Hhhhh-------cCCeEEEeCCcCC--CCCCC--CEEEe
Confidence 3456899999999999999998865 567999999 7676 33221 1233444444333 33333 99999
Q ss_pred CCcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCC-C---CceEee-eeccCCCcchhHHHHHHHHcC
Q 030558 85 SDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLP-W---PAFLMS-WRRRIGKEDETIFFTSCENAG 159 (175)
Q Consensus 85 ~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~-~---~~~~~~-~~~~~~~~~~~~~~~~~~~~g 159 (175)
..+++++. .++...+++++++.|+|||++++............... . ..+... ....-...+.+++.++++++|
T Consensus 266 ~~vlh~~~-d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~~AG 344 (364)
T 3p9c_A 266 KWILHDWS-DQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGAG 344 (364)
T ss_dssp ESCGGGSC-HHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHHHTT
T ss_pred hHHhccCC-HHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHHHCC
Confidence 99996665 45677999999999999999999744332221110000 0 000000 000111124689999999999
Q ss_pred CeeEEec
Q 030558 160 LEVKHLG 166 (175)
Q Consensus 160 ~~~~~~~ 166 (175)
|+..++.
T Consensus 345 F~~v~~~ 351 (364)
T 3p9c_A 345 FTGVKST 351 (364)
T ss_dssp CCEEEEE
T ss_pred CceEEEE
Confidence 9876653
No 177
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.56 E-value=4.3e-14 Score=104.12 Aligned_cols=107 Identities=11% Similarity=0.044 Sum_probs=77.5
Q ss_pred CCcEEEeCCCc---cHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCC----------CC
Q 030558 9 RRRCIELGSGT---GALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAF----------PI 74 (175)
Q Consensus 9 ~~~vLDlGcG~---G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~ 74 (175)
..+|||||||+ |.++..+++.. +.+|+++|+|+.|+ +.++++... ..++..+..+..+.. .+
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l-~~Ar~~~~~---~~~v~~~~~D~~~~~~~~~~~~~~~~~ 153 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVL-THGRALLAK---DPNTAVFTADVRDPEYILNHPDVRRMI 153 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHH-HHHHHHHTT---CTTEEEEECCTTCHHHHHHSHHHHHHC
T ss_pred CCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHH-HHHHHhcCC---CCCeEEEEeeCCCchhhhccchhhccC
Confidence 47899999999 98877665543 67899999999998 666655532 123344444433210 12
Q ss_pred CCCCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeecccc
Q 030558 75 PNPDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTK 120 (175)
Q Consensus 75 ~~~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~ 120 (175)
..++||+|++..+++++.+. +...++++++++|+|||.+++....
T Consensus 154 d~~~~d~v~~~~vlh~~~d~-~~~~~l~~~~~~L~pGG~l~i~~~~ 198 (274)
T 2qe6_A 154 DFSRPAAIMLVGMLHYLSPD-VVDRVVGAYRDALAPGSYLFMTSLV 198 (274)
T ss_dssp CTTSCCEEEETTTGGGSCTT-THHHHHHHHHHHSCTTCEEEEEEEB
T ss_pred CCCCCEEEEEechhhhCCcH-HHHHHHHHHHHhCCCCcEEEEEEec
Confidence 22489999999999666543 5779999999999999999998544
No 178
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.56 E-value=9e-15 Score=103.73 Aligned_cols=104 Identities=12% Similarity=0.092 Sum_probs=75.0
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCC--CcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEE
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMN--LDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLIL 83 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~--~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~ 83 (175)
..++.+|||+|||+|.++..+++..+ .+|+++|+++.++ +.++++....+.. .+.....+.....+ ..++||+|+
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~-~~a~~~~~~~~~~-~v~~~~~d~~~~~~-~~~~fD~v~ 151 (215)
T 2yxe_A 75 LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELA-EKAERTLRKLGYD-NVIVIVGDGTLGYE-PLAPYDRIY 151 (215)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHH-HHHHHHHHHHTCT-TEEEEESCGGGCCG-GGCCEEEEE
T ss_pred CCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHH-HHHHHHHHHcCCC-CeEEEECCcccCCC-CCCCeeEEE
Confidence 34678999999999999999988764 7899999999998 6666666554441 22333222211111 256899999
Q ss_pred eCCcccCcccchHHHHHHHHHHhhcCCCCceeeccccC
Q 030558 84 ASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKN 121 (175)
Q Consensus 84 ~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~ 121 (175)
+..++.+.. +++.++|+|||++++.....
T Consensus 152 ~~~~~~~~~---------~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 152 TTAAGPKIP---------EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp ESSBBSSCC---------HHHHHTEEEEEEEEEEESSS
T ss_pred ECCchHHHH---------HHHHHHcCCCcEEEEEECCC
Confidence 999884433 47899999999999986543
No 179
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.56 E-value=2.2e-14 Score=106.18 Aligned_cols=109 Identities=11% Similarity=0.231 Sum_probs=79.8
Q ss_pred CCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCc---cEEEe
Q 030558 8 ERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDW---DLILA 84 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f---D~i~~ 84 (175)
++.+|||+|||+|.+++.+++..+.+|+++|+|+.++ +.+++|...++...++..+..++.+.. .++| |+|++
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al-~~A~~n~~~~~l~~~v~~~~~D~~~~~---~~~f~~~D~Ivs 198 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAV-EIARKNAERHGVSDRFFVRKGEFLEPF---KEKFASIEMILS 198 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHH-HHHHHHHHHTTCTTSEEEEESSTTGGG---GGGTTTCCEEEE
T ss_pred CCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHH-HHHHHHHHHcCCCCceEEEECcchhhc---ccccCCCCEEEE
Confidence 5679999999999999999887567899999999998 888888888777444555555554322 2478 99999
Q ss_pred CCccc-----------Ccccc-----hHHHHHHHHHH-hhcCCCCceeecccc
Q 030558 85 SDILL-----------YVKQY-----SNLIKSLSVLL-KSYKPKDSQVGHLTK 120 (175)
Q Consensus 85 ~~~l~-----------~~~~~-----~~~~~~l~~l~-~~l~pgG~~~~~~~~ 120 (175)
+.... |.+.. .+...+++++. +.++|||.+++.+..
T Consensus 199 nPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~ 251 (284)
T 1nv8_A 199 NPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGE 251 (284)
T ss_dssp CCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCT
T ss_pred cCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECc
Confidence 74321 11110 01127899999 999999999886443
No 180
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.55 E-value=1.1e-13 Score=97.53 Aligned_cols=131 Identities=15% Similarity=0.054 Sum_probs=89.4
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASD 86 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~ 86 (175)
.++.+|||+|||+|.++..+++....+|+++|+|+.++ +.++.+...++. .+..+. ++...+ +++||+|+++.
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~-~~a~~~~~~~~~--~~~~~~---~d~~~~-~~~~D~v~~~~ 120 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAV-DVLIENLGEFKG--KFKVFI---GDVSEF-NSRVDIVIMNP 120 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHH-HHHHHHTGGGTT--SEEEEE---SCGGGC-CCCCSEEEECC
T ss_pred CCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHH-HHHHHHHHHcCC--CEEEEE---CchHHc-CCCCCEEEEcC
Confidence 46789999999999999999887445799999999998 777777776554 233333 332222 24899999988
Q ss_pred cccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCeeEEec
Q 030558 87 ILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVKHLG 166 (175)
Q Consensus 87 ~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 166 (175)
.+ +.........+++++.+.+ |+ +++.. . ........+.+.+++.|++++.+.
T Consensus 121 p~-~~~~~~~~~~~l~~~~~~l--~~-~~~~~--------------------~---~~~~~~~~~~~~l~~~g~~~~~~~ 173 (207)
T 1wy7_A 121 PF-GSQRKHADRPFLLKAFEIS--DV-VYSIH--------------------L---AKPEVRRFIEKFSWEHGFVVTHRL 173 (207)
T ss_dssp CC-SSSSTTTTHHHHHHHHHHC--SE-EEEEE--------------------E---CCHHHHHHHHHHHHHTTEEEEEEE
T ss_pred CC-ccccCCchHHHHHHHHHhc--Cc-EEEEE--------------------e---CCcCCHHHHHHHHHHCCCeEEEEE
Confidence 86 3333334457888888887 43 33321 0 001123556677888999988887
Q ss_pred ceEEE
Q 030558 167 SRVYC 171 (175)
Q Consensus 167 ~~~~~ 171 (175)
...+.
T Consensus 174 ~~~~~ 178 (207)
T 1wy7_A 174 TTKIE 178 (207)
T ss_dssp EEEEE
T ss_pred EEecC
Confidence 76665
No 181
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.55 E-value=3.7e-14 Score=102.56 Aligned_cols=103 Identities=17% Similarity=0.166 Sum_probs=77.2
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASD 86 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~ 86 (175)
.++.+|||+|||+|.++..+++. +.+|+++|+++.++ +.++++....+....+..+..+..+.. ..+++||+|+++.
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~-~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~v~~~~ 166 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFY-KTAQKNLKKFNLGKNVKFFNVDFKDAE-VPEGIFHAAFVDV 166 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHH-HHHHHHHHHTTCCTTEEEECSCTTTSC-CCTTCBSEEEECS
T ss_pred CCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHH-HHHHHHHHHcCCCCcEEEEEcChhhcc-cCCCcccEEEECC
Confidence 46889999999999999999998 88999999999998 777777766555333444433333221 1356899999842
Q ss_pred cccCcccchHHHHHHHHHHhhcCCCCceeecccc
Q 030558 87 ILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTK 120 (175)
Q Consensus 87 ~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~ 120 (175)
++. ..+++++.++|+|||++++..+.
T Consensus 167 -----~~~---~~~l~~~~~~L~~gG~l~~~~~~ 192 (248)
T 2yvl_A 167 -----REP---WHYLEKVHKSLMEGAPVGFLLPT 192 (248)
T ss_dssp -----SCG---GGGHHHHHHHBCTTCEEEEEESS
T ss_pred -----cCH---HHHHHHHHHHcCCCCEEEEEeCC
Confidence 222 37889999999999999997553
No 182
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.54 E-value=1.6e-14 Score=108.49 Aligned_cols=103 Identities=15% Similarity=0.123 Sum_probs=75.7
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCC--CcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEE
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMN--LDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLIL 83 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~--~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~ 83 (175)
..++.+|||+|||+|.++..+++..+ .+|+++|+|+.++ +.++++....+.. .+..+..+..+.. ..+++||+|+
T Consensus 73 ~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~-~~a~~~~~~~g~~-~v~~~~~d~~~~~-~~~~~fD~Iv 149 (317)
T 1dl5_A 73 LDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKIC-EIAKRNVERLGIE-NVIFVCGDGYYGV-PEFSPYDVIF 149 (317)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHH-HHHHHHHHHTTCC-SEEEEESCGGGCC-GGGCCEEEEE
T ss_pred CCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHH-HHHHHHHHHcCCC-CeEEEECChhhcc-ccCCCeEEEE
Confidence 44688999999999999999988743 3499999999998 7777777776652 2333333332222 2356899999
Q ss_pred eCCcccCcccchHHHHHHHHHHhhcCCCCceeecccc
Q 030558 84 ASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTK 120 (175)
Q Consensus 84 ~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~ 120 (175)
+..++.+.. +++.+.|||||++++....
T Consensus 150 ~~~~~~~~~---------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 150 VTVGVDEVP---------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp ECSBBSCCC---------HHHHHHEEEEEEEEEEBCB
T ss_pred EcCCHHHHH---------HHHHHhcCCCcEEEEEECC
Confidence 999984333 4678899999999997543
No 183
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.54 E-value=1.8e-14 Score=103.73 Aligned_cols=102 Identities=16% Similarity=0.217 Sum_probs=75.3
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCC-CCCCCCC-CccEEE
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGD-AFPIPNP-DWDLIL 83 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~fD~i~ 83 (175)
..++.+|||+|||+|.++..+++..+.+|+++|+++.++ +.++++....+.. .+.+..++ ..++.++ .||+|+
T Consensus 89 ~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~-~~a~~~~~~~~~~----~v~~~~~d~~~~~~~~~~fD~Ii 163 (235)
T 1jg1_A 89 LKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELV-EFAKRNLERAGVK----NVHVILGDGSKGFPPKAPYDVII 163 (235)
T ss_dssp CCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHH-HHHHHHHHHTTCC----SEEEEESCGGGCCGGGCCEEEEE
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHH-HHHHHHHHHcCCC----CcEEEECCcccCCCCCCCccEEE
Confidence 346789999999999999999887558899999999998 7777777765552 23333333 2233333 599999
Q ss_pred eCCcccCcccchHHHHHHHHHHhhcCCCCceeeccccC
Q 030558 84 ASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKN 121 (175)
Q Consensus 84 ~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~ 121 (175)
+..++.+.. +++.+.|+|||++++.+...
T Consensus 164 ~~~~~~~~~---------~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 164 VTAGAPKIP---------EPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp ECSBBSSCC---------HHHHHTEEEEEEEEEEECSS
T ss_pred ECCcHHHHH---------HHHHHhcCCCcEEEEEEecC
Confidence 998873332 36889999999999986543
No 184
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.54 E-value=9.2e-16 Score=111.12 Aligned_cols=104 Identities=17% Similarity=0.134 Sum_probs=77.2
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhC--CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCC-----CCCc
Q 030558 7 IERRRCIELGSGTGALAIFLRKAM--NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIP-----NPDW 79 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~f 79 (175)
.++++|||||||+|..++.+++.. +.+|+++|+++.++ +.++++....+...++..+..+..+.++.. +++|
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~-~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~f 137 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWT-KHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQF 137 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSC-CCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCE
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCE
Confidence 467899999999999999999864 56899999999997 777777777666444444433322222211 4789
Q ss_pred cEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 80 DLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 80 D~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
|+|++... ......+++++.++|+|||.+++.
T Consensus 138 D~V~~d~~------~~~~~~~l~~~~~~LkpGG~lv~d 169 (242)
T 3r3h_A 138 DFIFIDAD------KTNYLNYYELALKLVTPKGLIAID 169 (242)
T ss_dssp EEEEEESC------GGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEEcCC------hHHhHHHHHHHHHhcCCCeEEEEE
Confidence 99998643 334558899999999999988884
No 185
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.53 E-value=1.1e-14 Score=105.09 Aligned_cols=104 Identities=18% Similarity=0.169 Sum_probs=76.2
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhC--CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCC------------
Q 030558 7 IERRRCIELGSGTGALAIFLRKAM--NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAF------------ 72 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 72 (175)
.++++|||||||+|..+..+++.. +.+|+++|+++.++ +.++++....+...++..+..+..+.+
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~-~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 137 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWT-NVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSW 137 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHH-HHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGG
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccc
Confidence 467899999999999999999876 57899999999998 777777766655322333332221111
Q ss_pred --CCCC--CCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 73 --PIPN--PDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 73 --~~~~--~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
.+++ ++||+|++.... +....+++++.+.|+|||.+++.
T Consensus 138 ~~~f~~~~~~fD~I~~~~~~------~~~~~~l~~~~~~L~pgG~lv~~ 180 (239)
T 2hnk_A 138 ASDFAFGPSSIDLFFLDADK------ENYPNYYPLILKLLKPGGLLIAD 180 (239)
T ss_dssp GTTTCCSTTCEEEEEECSCG------GGHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccccCCCCCcCEEEEeCCH------HHHHHHHHHHHHHcCCCeEEEEE
Confidence 1222 789999987443 34448899999999999988885
No 186
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.53 E-value=3.4e-14 Score=102.97 Aligned_cols=107 Identities=13% Similarity=0.009 Sum_probs=73.0
Q ss_pred CCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhC--------CCCCCcceeeccCCCCCC--CCC
Q 030558 8 ERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTN--------GITPALPHIKHSWGDAFP--IPN 76 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~--~~~ 76 (175)
++.+|||||||+|.+++.+++.. ..+|+|+|+|+.++ +.++++...+ +. .++..+..+..+.++ +..
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l-~~a~~~~~~~~~~~~~~~~~-~nv~~~~~D~~~~l~~~~~~ 126 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVT-NYVEDRIIALRNNTASKHGF-QNINVLRGNAMKFLPNFFEK 126 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHH-HHHHHHHHHHHHTC-CCSTT-TTEEEEECCTTSCGGGTSCT
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHH-HHHHHHHHHHhhccccccCC-CcEEEEeccHHHHHHHhccc
Confidence 57889999999999999999875 35799999999998 6665555443 33 233444444333333 556
Q ss_pred CCccEEEeCCcccCcccch------HHHHHHHHHHhhcCCCCceeec
Q 030558 77 PDWDLILASDILLYVKQYS------NLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 77 ~~fD~i~~~~~l~~~~~~~------~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
+++|.|+....- -+.... ....+++++.++|+|||.+++.
T Consensus 127 ~~~d~v~~~~p~-p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~ 172 (246)
T 2vdv_E 127 GQLSKMFFCFPD-PHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTI 172 (246)
T ss_dssp TCEEEEEEESCC-CC------CSSCCCHHHHHHHHHHEEEEEEEEEE
T ss_pred cccCEEEEECCC-cccccchhHHhhccHHHHHHHHHHcCCCCEEEEE
Confidence 789999864221 000000 0037999999999999999886
No 187
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.53 E-value=1.4e-14 Score=106.63 Aligned_cols=101 Identities=16% Similarity=0.079 Sum_probs=77.4
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEe
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILA 84 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~ 84 (175)
..++.+|||+|||+|.+++.+++.. +.+|+++|+|+.++ +.+++|...++.. .+..+..+..+. +. .++||+|++
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av-~~a~~n~~~n~l~-~~~~~~~d~~~~-~~-~~~~D~Vi~ 192 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAY-HYLCENIKLNKLN-NVIPILADNRDV-EL-KDVADRVIM 192 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHH-HHHHHHHHHTTCS-SEEEEESCGGGC-CC-TTCEEEEEE
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHH-HHHHHHHHHcCCC-CEEEEECChHHc-Cc-cCCceEEEE
Confidence 3467899999999999999999874 45899999999998 8888898888772 233333333222 22 568999999
Q ss_pred CCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 85 SDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 85 ~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
.... ....++.++.+.|+|||.+++.
T Consensus 193 d~p~-------~~~~~l~~~~~~LkpgG~l~~s 218 (272)
T 3a27_A 193 GYVH-------KTHKFLDKTFEFLKDRGVIHYH 218 (272)
T ss_dssp CCCS-------SGGGGHHHHHHHEEEEEEEEEE
T ss_pred CCcc-------cHHHHHHHHHHHcCCCCEEEEE
Confidence 7653 2237889999999999988875
No 188
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.52 E-value=1.9e-14 Score=105.46 Aligned_cols=97 Identities=14% Similarity=0.142 Sum_probs=72.2
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILAS 85 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~ 85 (175)
.++.+|||+|||+|.++..+++.. +.+|+++|+|+.++ +.++++.. .+..+..+. ..+++.+++||+|++.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~-~~a~~~~~------~~~~~~~d~-~~~~~~~~~fD~v~~~ 155 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAI-KAAAKRYP------QVTFCVASS-HRLPFSDTSMDAIIRI 155 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHH-HHHHHHCT------TSEEEECCT-TSCSBCTTCEEEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHH-HHHHHhCC------CcEEEEcch-hhCCCCCCceeEEEEe
Confidence 367899999999999999998875 67899999999998 55544321 122333222 2345667899999986
Q ss_pred CcccCcccchHHHHHHHHHHhhcCCCCceeeccccC
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKN 121 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~ 121 (175)
.+. ..++++.++|+|||++++..+..
T Consensus 156 ~~~----------~~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 156 YAP----------CKAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp SCC----------CCHHHHHHHEEEEEEEEEEEECT
T ss_pred CCh----------hhHHHHHHhcCCCcEEEEEEcCH
Confidence 553 35789999999999999985443
No 189
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.51 E-value=2.4e-14 Score=110.27 Aligned_cols=106 Identities=9% Similarity=0.005 Sum_probs=75.6
Q ss_pred CCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCCc
Q 030558 8 ERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASDI 87 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~~ 87 (175)
+|++|||+|||+|.+++.+++. +..|+++|+|+.++ +.+++|...++...+ ....+..+.++...+.||+|++...
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~-ga~V~avDis~~al-~~a~~n~~~ng~~~~--~~~~D~~~~l~~~~~~fD~Ii~dpP 289 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARK-GAYALAVDKDLEAL-GVLDQAALRLGLRVD--IRHGEALPTLRGLEGPFHHVLLDPP 289 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHT-TCEEEEEESCHHHH-HHHHHHHHHHTCCCE--EEESCHHHHHHTCCCCEEEEEECCC
T ss_pred CCCeEEEcccchhHHHHHHHHc-CCeEEEEECCHHHH-HHHHHHHHHhCCCCc--EEEccHHHHHHHhcCCCCEEEECCC
Confidence 3899999999999999999887 56699999999998 888889888877321 2222211111111334999998755
Q ss_pred ccCcc------cchHHHHHHHHHHhhcCCCCceeec
Q 030558 88 LLYVK------QYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 88 l~~~~------~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
.+... .......+++.+.++|+|||.+++.
T Consensus 290 ~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~ 325 (393)
T 4dmg_A 290 TLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLS 325 (393)
T ss_dssp CCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 32211 1124468889999999999988764
No 190
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.51 E-value=4.8e-14 Score=104.76 Aligned_cols=108 Identities=11% Similarity=0.099 Sum_probs=71.0
Q ss_pred CCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCC---C-CCCcceeeccCCCCCCCCCCCccEE
Q 030558 8 ERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNG---I-TPALPHIKHSWGDAFPIPNPDWDLI 82 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~fD~i 82 (175)
++++|||||||+|..+..+++.. ..+|+++|+++.++ +.++++....+ . ..++..+..+..+.++..+++||+|
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi-~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVV-SFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHH-HHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 46899999999999999998864 46799999999998 77776654321 1 1123333333222333346789999
Q ss_pred EeCCcccCcccchHH--HHHHHHHHhhcCCCCceeec
Q 030558 83 LASDILLYVKQYSNL--IKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 83 ~~~~~l~~~~~~~~~--~~~l~~l~~~l~pgG~~~~~ 117 (175)
++...- .......+ ..+++++.++|+|||.+++.
T Consensus 162 i~D~~~-p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 197 (294)
T 3adn_A 162 ISDCTD-PIGPGESLFTSAFYEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp EECC-----------CCHHHHHHHHHTEEEEEEEEEE
T ss_pred EECCCC-ccCcchhccHHHHHHHHHHhcCCCCEEEEe
Confidence 995432 11111112 58999999999999988885
No 191
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.51 E-value=2.2e-14 Score=109.12 Aligned_cols=146 Identities=14% Similarity=0.103 Sum_probs=92.4
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEe
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILA 84 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~ 84 (175)
..++.+|||||||+|..+..+++.. +.+++++|+ +.++ +.++. . ..+..+..+..+ +.+ .||+|++
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~-~~a~~------~-~~v~~~~~d~~~--~~p--~~D~v~~ 252 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVV-ENLSG------S-NNLTYVGGDMFT--SIP--NADAVLL 252 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHH-TTCCC------B-TTEEEEECCTTT--CCC--CCSEEEE
T ss_pred cccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHH-hhccc------C-CCcEEEeccccC--CCC--CccEEEe
Confidence 3456899999999999999998875 568999999 8887 33321 1 123333333322 222 3999999
Q ss_pred CCcccCcccchHHHHHHHHHHhhcCC---CCceeeccccCCCCCCC--CCCC--CCceEeeeeccCCCcchhHHHHHHHH
Q 030558 85 SDILLYVKQYSNLIKSLSVLLKSYKP---KDSQVGHLTKNEQGEGT--EGLP--WPAFLMSWRRRIGKEDETIFFTSCEN 157 (175)
Q Consensus 85 ~~~l~~~~~~~~~~~~l~~l~~~l~p---gG~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (175)
..+++++. .+....+++++.++|+| ||++++........... .... ...+...... ....+.+++.+++++
T Consensus 253 ~~~lh~~~-d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~-g~~~t~~e~~~ll~~ 330 (352)
T 1fp2_A 253 KYILHNWT-DKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLN-GKERNEEEWKKLFIE 330 (352)
T ss_dssp ESCGGGSC-HHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGT-CCCEEHHHHHHHHHH
T ss_pred ehhhccCC-HHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhcc-CCCCCHHHHHHHHHH
Confidence 99996665 34556999999999999 99998874433221110 0000 0000000000 111246899999999
Q ss_pred cCCeeEEec
Q 030558 158 AGLEVKHLG 166 (175)
Q Consensus 158 ~g~~~~~~~ 166 (175)
+||++.++.
T Consensus 331 aGf~~~~~~ 339 (352)
T 1fp2_A 331 AGFQHYKIS 339 (352)
T ss_dssp TTCCEEEEE
T ss_pred CCCCeeEEE
Confidence 999876653
No 192
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.51 E-value=1.3e-14 Score=111.23 Aligned_cols=148 Identities=14% Similarity=0.090 Sum_probs=92.2
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEe
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILA 84 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~ 84 (175)
..++.+|||||||+|..+..+++.. ..+++++|+ +.++ +.++. . ..+..+..+..+ +++ .||+|++
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~-~~a~~------~-~~v~~~~~d~~~--~~~--~~D~v~~ 273 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVI-ENAPP------L-SGIEHVGGDMFA--SVP--QGDAMIL 273 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHH-TTCCC------C-TTEEEEECCTTT--CCC--CEEEEEE
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHH-Hhhhh------c-CCCEEEeCCccc--CCC--CCCEEEE
Confidence 3456899999999999999998875 457889999 8776 33221 1 123333333322 222 2999999
Q ss_pred CCcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCC-CCCCc---eEeeeeccCCCcchhHHHHHHHHcCC
Q 030558 85 SDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEG-LPWPA---FLMSWRRRIGKEDETIFFTSCENAGL 160 (175)
Q Consensus 85 ~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~ 160 (175)
..+++++. .+....++++++++|+|||++++............. ..... +...........+.+++.++++++||
T Consensus 274 ~~~lh~~~-d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf 352 (372)
T 1fp1_D 274 KAVCHNWS-DEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEKLSKLSGF 352 (372)
T ss_dssp ESSGGGSC-HHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTC
T ss_pred ecccccCC-HHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhccCCccCCHHHHHHHHHHCCC
Confidence 99995554 345569999999999999999988433222111000 00000 00000000111246899999999999
Q ss_pred eeEEecc
Q 030558 161 EVKHLGS 167 (175)
Q Consensus 161 ~~~~~~~ 167 (175)
++.++..
T Consensus 353 ~~~~~~~ 359 (372)
T 1fp1_D 353 SKFQVAC 359 (372)
T ss_dssp SEEEEEE
T ss_pred ceEEEEE
Confidence 8776543
No 193
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.51 E-value=1.3e-13 Score=96.76 Aligned_cols=124 Identities=14% Similarity=0.068 Sum_probs=79.6
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASD 86 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~ 86 (175)
.++.+|||+|||+|.++..+++....+|+++|+|+.++ +.++++.. .+..+..+.. .. +++||+|+++.
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~-~~a~~~~~------~~~~~~~d~~---~~-~~~~D~v~~~~ 118 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAI-ETAKRNCG------GVNFMVADVS---EI-SGKYDTWIMNP 118 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHH-HHHHHHCT------TSEEEECCGG---GC-CCCEEEEEECC
T ss_pred CCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHH-HHHHHhcC------CCEEEECcHH---HC-CCCeeEEEECC
Confidence 36789999999999999999887334699999999998 66666553 1233333322 22 26899999998
Q ss_pred cccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCeeEEec
Q 030558 87 ILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVKHLG 166 (175)
Q Consensus 87 ~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 166 (175)
.+++... .....+++++.+.+ |+ +++... ..+...+.+.++++| .++.+.
T Consensus 119 p~~~~~~-~~~~~~l~~~~~~~--g~-~~~~~~-------------------------~~~~~~~~~~~~~~g-~~~~~~ 168 (200)
T 1ne2_A 119 PFGSVVK-HSDRAFIDKAFETS--MW-IYSIGN-------------------------AKARDFLRREFSARG-DVFREE 168 (200)
T ss_dssp CC--------CHHHHHHHHHHE--EE-EEEEEE-------------------------GGGHHHHHHHHHHHE-EEEEEE
T ss_pred CchhccC-chhHHHHHHHHHhc--Cc-EEEEEc-------------------------CchHHHHHHHHHHCC-CEEEEE
Confidence 8744432 33347889999988 43 333210 011245566677777 777666
Q ss_pred ceEEE
Q 030558 167 SRVYC 171 (175)
Q Consensus 167 ~~~~~ 171 (175)
...+.
T Consensus 169 ~~~~~ 173 (200)
T 1ne2_A 169 KVYIT 173 (200)
T ss_dssp EEEEE
T ss_pred EEecC
Confidence 55554
No 194
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.51 E-value=2.8e-14 Score=101.96 Aligned_cols=104 Identities=13% Similarity=0.134 Sum_probs=73.6
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCC--CcEEEEeCChHHHHHHHHHHHhhCCC----CCCcceeeccCCCCCCCCCCCc
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMN--LDITTSDYNDQEIEDNIAYNSTTNGI----TPALPHIKHSWGDAFPIPNPDW 79 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~--~~v~~~D~s~~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~f 79 (175)
..++.+|||+|||+|..+..+++..+ .+|+++|+++.++ +.++++....+. ..++..+..+... .....++|
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~-~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~f 152 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELV-DDSVNNVRKDDPTLLSSGRVQLVVGDGRM-GYAEEAPY 152 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHH-HHHHHHHHHHCTHHHHTSSEEEEESCGGG-CCGGGCCE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHH-HHHHHHHHhhcccccCCCcEEEEECCccc-CcccCCCc
Confidence 44678999999999999999988754 5899999999998 666666654332 1223333333221 22235689
Q ss_pred cEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeecccc
Q 030558 80 DLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTK 120 (175)
Q Consensus 80 D~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~ 120 (175)
|+|++...+. .+++++.++|+|||++++.+..
T Consensus 153 D~i~~~~~~~---------~~~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 153 DAIHVGAAAP---------VVPQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp EEEEECSBBS---------SCCHHHHHTEEEEEEEEEEESC
T ss_pred CEEEECCchH---------HHHHHHHHhcCCCcEEEEEEec
Confidence 9999987762 2236789999999999997544
No 195
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.50 E-value=2.4e-14 Score=117.59 Aligned_cols=111 Identities=16% Similarity=0.090 Sum_probs=83.5
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCC-CCcceeeccCCCCCCCCCCCccEEEeC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGIT-PALPHIKHSWGDAFPIPNPDWDLILAS 85 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~fD~i~~~ 85 (175)
.+|++|||+|||+|.+++.+++....+|+++|+|+.++ +.+++|...++.. .++..+..+..+.++...++||+|++.
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al-~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~D 616 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYL-EWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFID 616 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHH-HHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEEC
T ss_pred cCCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHH-HHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEEC
Confidence 47899999999999999999886455699999999998 8999999998874 344444444332233345789999996
Q ss_pred CcccC--------cccchHHHHHHHHHHhhcCCCCceeecc
Q 030558 86 DILLY--------VKQYSNLIKSLSVLLKSYKPKDSQVGHL 118 (175)
Q Consensus 86 ~~l~~--------~~~~~~~~~~l~~l~~~l~pgG~~~~~~ 118 (175)
...+. +........++..+.++|+|||.+++..
T Consensus 617 PP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~ 657 (703)
T 3v97_A 617 PPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSN 657 (703)
T ss_dssp CCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 54321 1223456788999999999999888753
No 196
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.50 E-value=2.2e-14 Score=110.38 Aligned_cols=111 Identities=12% Similarity=0.036 Sum_probs=80.4
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCC-CcceeeccCCCCCCC---CCCCccEE
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITP-ALPHIKHSWGDAFPI---PNPDWDLI 82 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~fD~i 82 (175)
.++++|||+|||+|.+++.+++....+|+++|+|+.++ +.+++|...++... ++..+..+..+.++. ...+||+|
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al-~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~I 289 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSR-ALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDII 289 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHH-HHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHH-HHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEE
Confidence 46789999999999999999986455899999999998 88899999888743 444444333221221 23589999
Q ss_pred EeCCccc------CcccchHHHHHHHHHHhhcCCCCceeecc
Q 030558 83 LASDILL------YVKQYSNLIKSLSVLLKSYKPKDSQVGHL 118 (175)
Q Consensus 83 ~~~~~l~------~~~~~~~~~~~l~~l~~~l~pgG~~~~~~ 118 (175)
++....+ ..........+++.+.+.|+|||.+++..
T Consensus 290 i~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~ 331 (385)
T 2b78_A 290 IIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIAST 331 (385)
T ss_dssp EECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 9865442 11122345567888899999999888863
No 197
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.49 E-value=1.6e-13 Score=102.99 Aligned_cols=109 Identities=15% Similarity=0.122 Sum_probs=76.1
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhC--CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCC--CCCCCccE
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAM--NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFP--IPNPDWDL 81 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~fD~ 81 (175)
..++.+|||+|||+|..+..+++.. ..+|+++|+++.++ +.++++....+.. .+.+..++... ..+++||+
T Consensus 116 ~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l-~~a~~~~~~~g~~----~v~~~~~D~~~~~~~~~~fD~ 190 (315)
T 1ixk_A 116 PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRL-RETRLNLSRLGVL----NVILFHSSSLHIGELNVEFDK 190 (315)
T ss_dssp CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHH-HHHHHHHHHHTCC----SEEEESSCGGGGGGGCCCEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHH-HHHHHHHHHhCCC----eEEEEECChhhcccccccCCE
Confidence 3467899999999999999998875 36899999999998 7777777766652 23333333222 23568999
Q ss_pred EEeCCc------ccCccc-------------chHHHHHHHHHHhhcCCCCceeeccc
Q 030558 82 ILASDI------LLYVKQ-------------YSNLIKSLSVLLKSYKPKDSQVGHLT 119 (175)
Q Consensus 82 i~~~~~------l~~~~~-------------~~~~~~~l~~l~~~l~pgG~~~~~~~ 119 (175)
|++... +...++ ......+++++.++|||||++++++.
T Consensus 191 Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stc 247 (315)
T 1ixk_A 191 ILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTC 247 (315)
T ss_dssp EEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred EEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 998432 211110 01135899999999999999988643
No 198
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.49 E-value=2.7e-14 Score=103.01 Aligned_cols=145 Identities=12% Similarity=0.087 Sum_probs=94.7
Q ss_pred CCCcEEEeCCCccHHHHHHHHh-CCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCC-CCCCCCccEEEeC
Q 030558 8 ERRRCIELGSGTGALAIFLRKA-MNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAF-PIPNPDWDLILAS 85 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~fD~i~~~ 85 (175)
...+|||||||+|-+++.++.. ...+|+++|+++.++ +.++.+...++.. ..+.+.+.. ....+.||++++.
T Consensus 132 ~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~l-e~a~~~l~~~g~~-----~~~~v~D~~~~~p~~~~DvaL~l 205 (281)
T 3lcv_B 132 RPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLV-GFVDEALTRLNVP-----HRTNVADLLEDRLDEPADVTLLL 205 (281)
T ss_dssp CCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHH-HHHHHHHHHTTCC-----EEEEECCTTTSCCCSCCSEEEET
T ss_pred CCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHH-HHHHHHHHhcCCC-----ceEEEeeecccCCCCCcchHHHH
Confidence 3679999999999999988775 367899999999998 8888898887772 233444433 3456789999999
Q ss_pred CcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCeeEEe
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVKHL 165 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 165 (175)
-++.+.++.. ....+ ++.+.|+|+|.++-. +.+. +..+.+.+.. .| ...|.+.+.+.|..+.++
T Consensus 206 kti~~Le~q~-kg~g~-~ll~aL~~~~vvVSf--p~ks----l~Grs~gm~~----~Y----~~~~e~~~~~~g~~~~~~ 269 (281)
T 3lcv_B 206 KTLPCLETQQ-RGSGW-EVIDIVNSPNIVVTF--PTKS----LGQRSKGMFQ----NY----SQSFESQARERSCRIQRL 269 (281)
T ss_dssp TCHHHHHHHS-TTHHH-HHHHHSSCSEEEEEE--ECC-----------CHHH----HH----HHHHHHHHHHHTCCEEEE
T ss_pred HHHHHhhhhh-hHHHH-HHHHHhCCCCEEEec--cchh----hcCCCcchhh----HH----HHHHHHHHHhcCCceeee
Confidence 9984443322 22334 899999999855543 1100 0000111010 01 256677788788766655
Q ss_pred ---cceEEEEec
Q 030558 166 ---GSRVYCIKL 174 (175)
Q Consensus 166 ---~~~~~~i~~ 174 (175)
++..|+|.+
T Consensus 270 ~~~nEl~y~i~k 281 (281)
T 3lcv_B 270 EIGNELIYVIQK 281 (281)
T ss_dssp EETTEEEEEEC-
T ss_pred eecCeeEEEecC
Confidence 677777754
No 199
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.49 E-value=2.1e-14 Score=103.61 Aligned_cols=104 Identities=17% Similarity=0.156 Sum_probs=76.4
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhC--CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCC-C-----CCCC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAM--NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFP-I-----PNPD 78 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~ 78 (175)
.++++|||||||+|..++.+++.. +.+|+++|+++.++ +.++++....+...++..+..+..+.++ . ..++
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~-~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~ 147 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAY-EIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGS 147 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHH-HHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTC
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCC
Confidence 467899999999999999999875 57899999999998 7888887776663233333322221111 1 2568
Q ss_pred ccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 79 WDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 79 fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
||+|++... .......++++.+.|+|||.+++.
T Consensus 148 fD~I~~d~~------~~~~~~~l~~~~~~L~pGG~lv~d 180 (237)
T 3c3y_A 148 YDFGFVDAD------KPNYIKYHERLMKLVKVGGIVAYD 180 (237)
T ss_dssp EEEEEECSC------GGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCEEEECCc------hHHHHHHHHHHHHhcCCCeEEEEe
Confidence 999998633 234558999999999999988774
No 200
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.49 E-value=3.1e-13 Score=103.64 Aligned_cols=101 Identities=12% Similarity=0.103 Sum_probs=76.6
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCC-CcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCC-CCCCccEEEe
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMN-LDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPI-PNPDWDLILA 84 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~fD~i~~ 84 (175)
.++++|||+| |+|.+++.+++... .+|+++|+++.++ +.++++...++.. ++..+..+..+.++. .+++||+|++
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l-~~a~~~~~~~g~~-~v~~~~~D~~~~l~~~~~~~fD~Vi~ 247 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLT-KFIEKAANEIGYE-DIEIFTFDLRKPLPDYALHKFDTFIT 247 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHH-HHHHHHHHHHTCC-CEEEECCCTTSCCCTTTSSCBSEEEE
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHH-HHHHHHHHHcCCC-CEEEEEChhhhhchhhccCCccEEEE
Confidence 3578999999 99999999988743 6899999999998 8888888776663 344444444332332 3468999999
Q ss_pred CCcccCcccchHHHHHHHHHHhhcCCCCce
Q 030558 85 SDILLYVKQYSNLIKSLSVLLKSYKPKDSQ 114 (175)
Q Consensus 85 ~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~ 114 (175)
+..+ +.. ....+++++.++|+|||++
T Consensus 248 ~~p~-~~~---~~~~~l~~~~~~LkpgG~~ 273 (373)
T 2qm3_A 248 DPPE-TLE---AIRAFVGRGIATLKGPRCA 273 (373)
T ss_dssp CCCS-SHH---HHHHHHHHHHHTBCSTTCE
T ss_pred CCCC-chH---HHHHHHHHHHHHcccCCeE
Confidence 8765 333 2469999999999999954
No 201
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.49 E-value=2.4e-13 Score=103.47 Aligned_cols=110 Identities=14% Similarity=0.108 Sum_probs=80.5
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhC--CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEE
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAM--NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLIL 83 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~ 83 (175)
+.++.+|||+|||+|.+++.++... ..+|+|+|+++.++ +.++.|....+.. .+..+..+..+ ++...+.||+|+
T Consensus 201 ~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i-~~a~~n~~~~g~~-~i~~~~~D~~~-~~~~~~~~D~Ii 277 (354)
T 3tma_A 201 ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRL-GLAREAALASGLS-WIRFLRADARH-LPRFFPEVDRIL 277 (354)
T ss_dssp CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHH-HHHHHHHHHTTCT-TCEEEECCGGG-GGGTCCCCSEEE
T ss_pred CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHH-HHHHHHHHHcCCC-ceEEEeCChhh-CccccCCCCEEE
Confidence 4467899999999999999998864 37899999999998 8888888887763 34444433322 233345799999
Q ss_pred eCCcccCcccc------hHHHHHHHHHHhhcCCCCceeeccc
Q 030558 84 ASDILLYVKQY------SNLIKSLSVLLKSYKPKDSQVGHLT 119 (175)
Q Consensus 84 ~~~~l~~~~~~------~~~~~~l~~l~~~l~pgG~~~~~~~ 119 (175)
++..+ ..... .....+++++.+.|+|||++++.+.
T Consensus 278 ~npPy-g~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 278 ANPPH-GLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp ECCCS-CC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred ECCCC-cCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 97664 22111 1126889999999999999888643
No 202
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.49 E-value=4.8e-14 Score=103.85 Aligned_cols=103 Identities=15% Similarity=0.155 Sum_probs=74.8
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhC--CCcEEEEeCChHHHHHHHHHHHhhC-C-CCCCcceeeccCCCCCCCCCCCccE
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAM--NLDITTSDYNDQEIEDNIAYNSTTN-G-ITPALPHIKHSWGDAFPIPNPDWDL 81 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~~~D~s~~~l~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~fD~ 81 (175)
..++.+|||+|||+|.++..+++.. +.+|+++|+++.++ +.++++.... + ...++..+..+..+ .++.+++||+
T Consensus 97 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~-~~a~~~~~~~~g~~~~~v~~~~~d~~~-~~~~~~~~D~ 174 (280)
T 1i9g_A 97 IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHA-EHARRNVSGCYGQPPDNWRLVVSDLAD-SELPDGSVDR 174 (280)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHH-HHHHHHHHHHHTSCCTTEEEECSCGGG-CCCCTTCEEE
T ss_pred CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHH-HHHHHHHHHhcCCCCCcEEEEECchHh-cCCCCCceeE
Confidence 4567899999999999999998863 56899999999998 7777776654 3 22233333333222 2345678999
Q ss_pred EEeCCcccCcccchHHHHHHHHHHhhcCCCCceeecc
Q 030558 82 ILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHL 118 (175)
Q Consensus 82 i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~ 118 (175)
|+++. .+.. .+++++.++|+|||.+++..
T Consensus 175 v~~~~-----~~~~---~~l~~~~~~L~pgG~l~~~~ 203 (280)
T 1i9g_A 175 AVLDM-----LAPW---EVLDAVSRLLVAGGVLMVYV 203 (280)
T ss_dssp EEEES-----SCGG---GGHHHHHHHEEEEEEEEEEE
T ss_pred EEECC-----cCHH---HHHHHHHHhCCCCCEEEEEe
Confidence 99832 2222 78999999999999988864
No 203
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.49 E-value=4.5e-14 Score=100.96 Aligned_cols=105 Identities=13% Similarity=0.074 Sum_probs=74.4
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCC------CcEEEEeCChHHHHHHHHHHHhhCCC----CCCcceeeccCCCCCC--
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMN------LDITTSDYNDQEIEDNIAYNSTTNGI----TPALPHIKHSWGDAFP-- 73 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~------~~v~~~D~s~~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-- 73 (175)
..++.+|||+|||+|.++..+++..+ .+|+++|+++.++ +.++++....+. ..++..+..+..+..+
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~-~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 156 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLV-NFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEE 156 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHH-HHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHH
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHH-HHHHHHHHHcCccccccCCEEEEECChHhccccc
Confidence 44678999999999999999988754 4899999999998 677766665441 1223333333222110
Q ss_pred -CCCCCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeecccc
Q 030558 74 -IPNPDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTK 120 (175)
Q Consensus 74 -~~~~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~ 120 (175)
...++||+|++...+.+ +++++.+.|+|||++++....
T Consensus 157 ~~~~~~fD~I~~~~~~~~---------~~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 157 KKELGLFDAIHVGASASE---------LPEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp HHHHCCEEEEEECSBBSS---------CCHHHHHHEEEEEEEEEEEEE
T ss_pred CccCCCcCEEEECCchHH---------HHHHHHHhcCCCcEEEEEEcc
Confidence 23468999999888722 247789999999999987543
No 204
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.48 E-value=7.9e-14 Score=95.95 Aligned_cols=120 Identities=8% Similarity=-0.030 Sum_probs=80.5
Q ss_pred CccccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCC---CCCCc
Q 030558 3 HREWIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPI---PNPDW 79 (175)
Q Consensus 3 ~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~f 79 (175)
.....+|.+|||+|||. | ++|+|+.|+ +.++++... .+.....+.. .+++ .+++|
T Consensus 7 ~~g~~~g~~vL~~~~g~--------------v-~vD~s~~ml-~~a~~~~~~-----~~~~~~~d~~-~~~~~~~~~~~f 64 (176)
T 2ld4_A 7 DFGISAGQFVAVVWDKS--------------S-PVEALKGLV-DKLQALTGN-----EGRVSVENIK-QLLQSAHKESSF 64 (176)
T ss_dssp TTTCCTTSEEEEEECTT--------------S-CHHHHHHHH-HHHHHHTTT-----TSEEEEEEGG-GGGGGCCCSSCE
T ss_pred ccCCCCCCEEEEecCCc--------------e-eeeCCHHHH-HHHHHhccc-----CcEEEEechh-cCccccCCCCCE
Confidence 34566899999999996 2 399999998 555544322 1233333332 2333 67899
Q ss_pred cEEEeCCcccCc-ccchHHHHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHc
Q 030558 80 DLILASDILLYV-KQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENA 158 (175)
Q Consensus 80 D~i~~~~~l~~~-~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (175)
|+|+++.++++. .+ ...++++++++|||||++++..+..... .. ..+ ..+..++.+.++++
T Consensus 65 D~V~~~~~l~~~~~~---~~~~l~~~~r~LkpgG~l~~~~~~~~~~------~~--------~~~-~~~~~~~~~~l~~a 126 (176)
T 2ld4_A 65 DIILSGLVPGSTTLH---SAEILAEIARILRPGGCLFLKEPVETAV------DN--------NSK-VKTASKLCSALTLS 126 (176)
T ss_dssp EEEEECCSTTCCCCC---CHHHHHHHHHHEEEEEEEEEEEEEESSS------CS--------SSS-SCCHHHHHHHHHHT
T ss_pred eEEEECChhhhcccC---HHHHHHHHHHHCCCCEEEEEEccccccc------cc--------ccc-cCCHHHHHHHHHHC
Confidence 999999998665 43 3599999999999999999953321100 00 111 11357899999999
Q ss_pred CCeeE
Q 030558 159 GLEVK 163 (175)
Q Consensus 159 g~~~~ 163 (175)
|| ++
T Consensus 127 Gf-i~ 130 (176)
T 2ld4_A 127 GL-VE 130 (176)
T ss_dssp TC-EE
T ss_pred CC-cE
Confidence 99 55
No 205
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.47 E-value=2.8e-14 Score=102.11 Aligned_cols=104 Identities=13% Similarity=0.081 Sum_probs=76.2
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhC--CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCC-C--C--CCCc
Q 030558 7 IERRRCIELGSGTGALAIFLRKAM--NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFP-I--P--NPDW 79 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~--~~~f 79 (175)
.++++|||+|||+|..+..+++.. +.+|+++|+++.++ +.++++....+...++..+..+..+.++ . . .++|
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~-~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~ 146 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPP-ELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTF 146 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHH-HHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCE
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCc
Confidence 467899999999999999998864 56899999999998 7777777776654344444332211111 1 1 1689
Q ss_pred cEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 80 DLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 80 D~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
|+|++... ......+++++.+.|+|||.+++.
T Consensus 147 D~v~~d~~------~~~~~~~l~~~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 147 DVAVVDAD------KENCSAYYERCLQLLRPGGILAVL 178 (229)
T ss_dssp EEEEECSC------STTHHHHHHHHHHHEEEEEEEEEE
T ss_pred cEEEECCC------HHHHHHHHHHHHHHcCCCeEEEEE
Confidence 99998644 233458999999999999988874
No 206
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.46 E-value=3.3e-13 Score=96.45 Aligned_cols=100 Identities=20% Similarity=0.210 Sum_probs=73.3
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCC-CCCCCCccEEEeC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAF-PIPNPDWDLILAS 85 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~fD~i~~~ 85 (175)
.++.+|||||||+|.+++.+. .+..|+|+|+++.++ +.++.+...++. ...+.+.|.. ....++||+|++.
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i-~~ar~~~~~~g~-----~~~~~v~D~~~~~~~~~~DvvLll 175 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLG-DVITPFAREKDW-----DFTFALQDVLCAPPAEAGDLALIF 175 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHH-HHHHHHHHHTTC-----EEEEEECCTTTSCCCCBCSEEEEE
T ss_pred CCCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHH-HHHHHHHHhcCC-----CceEEEeecccCCCCCCcchHHHH
Confidence 357899999999999999886 478999999999998 888888777665 2233343433 2345589999999
Q ss_pred CcccCcccchHHHHHHHHHHhhcCCCCceee
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKPKDSQVG 116 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~ 116 (175)
-++.+.++... ...-++.+.|++++.++-
T Consensus 176 k~lh~LE~q~~--~~~~~ll~aL~~~~vvVs 204 (253)
T 3frh_A 176 KLLPLLEREQA--GSAMALLQSLNTPRMAVS 204 (253)
T ss_dssp SCHHHHHHHST--THHHHHHHHCBCSEEEEE
T ss_pred HHHHHhhhhch--hhHHHHHHHhcCCCEEEE
Confidence 88854444333 344488889999874444
No 207
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.46 E-value=5.5e-14 Score=108.61 Aligned_cols=110 Identities=11% Similarity=0.080 Sum_probs=80.0
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCC-CCCcceeeccCCCCCC-C--CCCCccEE
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGI-TPALPHIKHSWGDAFP-I--PNPDWDLI 82 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~--~~~~fD~i 82 (175)
.++++|||+|||+|.+++.+++.+..+|+++|+|+.++ +.+++|...++. ..++..+..+..+.++ . ...+||+|
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al-~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~I 297 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEAL-DIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVI 297 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHH-HHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHH-HHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEE
Confidence 46789999999999999999987556899999999998 888889888776 3333444333222111 1 14689999
Q ss_pred EeCCcccCc------ccchHHHHHHHHHHhhcCCCCceeec
Q 030558 83 LASDILLYV------KQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 83 ~~~~~l~~~------~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
++....+.. ........++.++.+.|+|||.+++.
T Consensus 298 i~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 338 (396)
T 3c0k_A 298 VMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTF 338 (396)
T ss_dssp EECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEE
T ss_pred EECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 997543111 11245668999999999999988875
No 208
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.46 E-value=1e-13 Score=104.85 Aligned_cols=107 Identities=17% Similarity=0.208 Sum_probs=71.9
Q ss_pred cccCCCcEEEeCCCccHHHHHHHHhCC--CcEEEEeCChHHHHHHHHHHHhh-------CCC---CCCcceeeccCCCCC
Q 030558 5 EWIERRRCIELGSGTGALAIFLRKAMN--LDITTSDYNDQEIEDNIAYNSTT-------NGI---TPALPHIKHSWGDAF 72 (175)
Q Consensus 5 ~~~~~~~vLDlGcG~G~~~~~l~~~~~--~~v~~~D~s~~~l~~~~~~~~~~-------~~~---~~~~~~~~~~~~~~~ 72 (175)
...++.+|||+|||+|.++..+++..+ .+|+++|+++.++ +.++++... ++. ..++..+..+..+..
T Consensus 102 ~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~-~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~ 180 (336)
T 2b25_A 102 DINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHH-DLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGAT 180 (336)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHH-HHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC
T ss_pred CCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHH-HHHHHHHHHhhcccccccccccCCceEEEECChHHcc
Confidence 345788999999999999999988743 7899999999998 676666653 222 122333333333222
Q ss_pred -CCCCCCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeecccc
Q 030558 73 -PIPNPDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTK 120 (175)
Q Consensus 73 -~~~~~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~ 120 (175)
++.+++||+|++... ... .+++++.++|+|||++++..+.
T Consensus 181 ~~~~~~~fD~V~~~~~-----~~~---~~l~~~~~~LkpgG~lv~~~~~ 221 (336)
T 2b25_A 181 EDIKSLTFDAVALDML-----NPH---VTLPVFYPHLKHGGVCAVYVVN 221 (336)
T ss_dssp -------EEEEEECSS-----STT---TTHHHHGGGEEEEEEEEEEESS
T ss_pred cccCCCCeeEEEECCC-----CHH---HHHHHHHHhcCCCcEEEEEeCC
Confidence 344568999998532 122 4789999999999999887443
No 209
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.46 E-value=4e-14 Score=101.33 Aligned_cols=102 Identities=13% Similarity=0.136 Sum_probs=71.7
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCC-------CcEEEEeCChHHHHHHHHHHHhhCCC----CCCcceeeccCCCCCCC
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMN-------LDITTSDYNDQEIEDNIAYNSTTNGI----TPALPHIKHSWGDAFPI 74 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~-------~~v~~~D~s~~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 74 (175)
..++.+|||+|||+|.++..+++..+ .+|+++|+++.++ +.++++....+. ..++..+..+..+ ++
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~-~~a~~~~~~~~~~~~~~~~v~~~~~d~~~--~~ 158 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELV-RRSKANLNTDDRSMLDSGQLLIVEGDGRK--GY 158 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHH-HHHHHHHHHHHHHHHHHTSEEEEESCGGG--CC
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHH-HHHHHHHHhcCccccCCCceEEEECCccc--CC
Confidence 34678999999999999999988654 4899999999998 666655544220 0122333333222 23
Q ss_pred CC-CCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeeccc
Q 030558 75 PN-PDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLT 119 (175)
Q Consensus 75 ~~-~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~ 119 (175)
.+ ++||+|++...+.+. .+++.+.|+|||++++...
T Consensus 159 ~~~~~fD~I~~~~~~~~~---------~~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 159 PPNAPYNAIHVGAAAPDT---------PTELINQLASGGRLIVPVG 195 (227)
T ss_dssp GGGCSEEEEEECSCBSSC---------CHHHHHTEEEEEEEEEEES
T ss_pred CcCCCccEEEECCchHHH---------HHHHHHHhcCCCEEEEEEe
Confidence 33 689999999887332 2678999999999998754
No 210
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.46 E-value=2.2e-14 Score=103.13 Aligned_cols=104 Identities=13% Similarity=0.112 Sum_probs=74.9
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhC--CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCC---CCCCCC--CCc
Q 030558 7 IERRRCIELGSGTGALAIFLRKAM--NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGD---AFPIPN--PDW 79 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~~f 79 (175)
.++++|||+|||+|..+..+++.. +.+|+++|+++.++ +.++++....+...++..+..+..+ .++..+ ++|
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~-~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~f 149 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNAT-AIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEF 149 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHH-HHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCE
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCc
Confidence 467899999999999999998865 46899999999998 7777776665552223333222211 111222 789
Q ss_pred cEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 80 DLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 80 D~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
|+|++... .++...+++++.++|+|||.+++.
T Consensus 150 D~V~~d~~------~~~~~~~l~~~~~~LkpgG~lv~~ 181 (232)
T 3cbg_A 150 DLIFIDAD------KRNYPRYYEIGLNLLRRGGLMVID 181 (232)
T ss_dssp EEEEECSC------GGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred CEEEECCC------HHHHHHHHHHHHHHcCCCeEEEEe
Confidence 99998644 234558999999999999988884
No 211
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.46 E-value=6.7e-14 Score=100.93 Aligned_cols=98 Identities=14% Similarity=0.133 Sum_probs=68.7
Q ss_pred cCCCcEEEeCCCccHHHHHHHHh-----CCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCC--CCCCC-CC
Q 030558 7 IERRRCIELGSGTGALAIFLRKA-----MNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDA--FPIPN-PD 78 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~-----~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~ 78 (175)
.++.+|||||||+|..+..+++. .+.+|+++|+++.++ +.++ . ...++..+..+..+. ++... .+
T Consensus 80 ~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l-~~a~-~-----~~~~v~~~~gD~~~~~~l~~~~~~~ 152 (236)
T 2bm8_A 80 LRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRC-QIPA-S-----DMENITLHQGDCSDLTTFEHLREMA 152 (236)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTC-CCCG-G-----GCTTEEEEECCSSCSGGGGGGSSSC
T ss_pred cCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHH-HHHh-c-----cCCceEEEECcchhHHHHHhhccCC
Confidence 35689999999999999999886 267899999999987 3332 1 112334444333322 23223 37
Q ss_pred ccEEEeCCcccCcccchHHHHHHHHHHh-hcCCCCceeec
Q 030558 79 WDLILASDILLYVKQYSNLIKSLSVLLK-SYKPKDSQVGH 117 (175)
Q Consensus 79 fD~i~~~~~l~~~~~~~~~~~~l~~l~~-~l~pgG~~~~~ 117 (175)
||+|++... + . +...++.++.+ +|+|||++++.
T Consensus 153 fD~I~~d~~--~-~---~~~~~l~~~~r~~LkpGG~lv~~ 186 (236)
T 2bm8_A 153 HPLIFIDNA--H-A---NTFNIMKWAVDHLLEEGDYFIIE 186 (236)
T ss_dssp SSEEEEESS--C-S---SHHHHHHHHHHHTCCTTCEEEEC
T ss_pred CCEEEECCc--h-H---hHHHHHHHHHHhhCCCCCEEEEE
Confidence 999997554 2 1 34589999997 99999999885
No 212
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.45 E-value=6.3e-14 Score=106.83 Aligned_cols=145 Identities=14% Similarity=0.080 Sum_probs=90.8
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILAS 85 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~ 85 (175)
.++.+|||||||+|.++..+++.. +.+++++|+ +.++ +.++. . ..+..+..+..+ +.+ .||+|++.
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~-~~a~~------~-~~v~~~~~d~~~--~~~--~~D~v~~~ 258 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVV-GNLTG------N-ENLNFVGGDMFK--SIP--SADAVLLK 258 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHH-SSCCC------C-SSEEEEECCTTT--CCC--CCSEEEEE
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHH-hhccc------C-CCcEEEeCccCC--CCC--CceEEEEc
Confidence 456899999999999999998875 557999999 6676 33221 1 123333333322 222 59999999
Q ss_pred CcccCcccchHHHHHHHHHHhhcCC---CCceeeccccCCCCCCCC-CCCCCc---eEeeeeccCCCcchhHHHHHHHHc
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKP---KDSQVGHLTKNEQGEGTE-GLPWPA---FLMSWRRRIGKEDETIFFTSCENA 158 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~p---gG~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 158 (175)
.+++++. .+....+++++.++|+| ||++++............ ...... +...........+..++.++++++
T Consensus 259 ~vlh~~~-d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~a 337 (358)
T 1zg3_A 259 WVLHDWN-DEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDA 337 (358)
T ss_dssp SCGGGSC-HHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHT
T ss_pred ccccCCC-HHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCCCCCCCHHHHHHHHHHc
Confidence 9995554 34566999999999999 999998744332211100 000000 000000001112468999999999
Q ss_pred CCeeEEe
Q 030558 159 GLEVKHL 165 (175)
Q Consensus 159 g~~~~~~ 165 (175)
||++.++
T Consensus 338 Gf~~~~~ 344 (358)
T 1zg3_A 338 GFSSYKI 344 (358)
T ss_dssp TCCEEEE
T ss_pred CCCeeEE
Confidence 9987665
No 213
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.45 E-value=6.9e-13 Score=101.69 Aligned_cols=127 Identities=14% Similarity=0.135 Sum_probs=86.9
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCC-CcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMN-LDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILAS 85 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~ 85 (175)
.++.+|||+|||+|.+++.++.... .+|+|+|+|+.++ +.++.|....+....+.....+.. .++..+++||+|+++
T Consensus 216 ~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l-~~A~~n~~~~gl~~~i~~~~~D~~-~~~~~~~~fD~Ii~n 293 (373)
T 3tm4_A 216 LDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHL-IGAEMNALAAGVLDKIKFIQGDAT-QLSQYVDSVDFAISN 293 (373)
T ss_dssp CCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHH-HHHHHHHHHTTCGGGCEEEECCGG-GGGGTCSCEEEEEEE
T ss_pred CCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHH-HHHHHHHHHcCCCCceEEEECChh-hCCcccCCcCEEEEC
Confidence 4678999999999999999988732 2899999999998 888888887776433444433332 234455789999997
Q ss_pred CcccCc----ccchHH-HHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCC
Q 030558 86 DILLYV----KQYSNL-IKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGL 160 (175)
Q Consensus 86 ~~l~~~----~~~~~~-~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 160 (175)
..+... ...+.+ ..+++++.+++ +|.+++.+. +...+.+.+++.||
T Consensus 294 pPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~---------------------------~~~~~~~~~~~~G~ 344 (373)
T 3tm4_A 294 LPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITT---------------------------EKKAIEEAIAENGF 344 (373)
T ss_dssp CCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEES---------------------------CHHHHHHHHHHTTE
T ss_pred CCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC---------------------------CHHHHHHHHHHcCC
Confidence 664211 112222 57888888888 444444211 23667778888898
Q ss_pred eeEE
Q 030558 161 EVKH 164 (175)
Q Consensus 161 ~~~~ 164 (175)
++.+
T Consensus 345 ~~~~ 348 (373)
T 3tm4_A 345 EIIH 348 (373)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8655
No 214
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.45 E-value=9.6e-14 Score=102.23 Aligned_cols=112 Identities=13% Similarity=0.035 Sum_probs=77.6
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhC-C-CcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCC----CCCCcc
Q 030558 7 IERRRCIELGSGTGALAIFLRKAM-N-LDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPI----PNPDWD 80 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~-~-~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~fD 80 (175)
.++.+|||+|||+|..+..+++.. + .+|+++|+++.++ +.++++....+.. ++..+..+..+ .+. ..++||
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l-~~~~~~~~~~g~~-~v~~~~~D~~~-~~~~~~~~~~~fD 158 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRT-KALKSNINRMGVL-NTIIINADMRK-YKDYLLKNEIFFD 158 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHH-HHHHHHHHHTTCC-SEEEEESCHHH-HHHHHHHTTCCEE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHH-HHHHHHHHHhCCC-cEEEEeCChHh-cchhhhhccccCC
Confidence 468899999999999999998854 3 6899999999998 7788888776662 22332222111 111 256899
Q ss_pred EEEeCCcccCcc---------------cchHHHHHHHHHHhhcCCCCceeeccccC
Q 030558 81 LILASDILLYVK---------------QYSNLIKSLSVLLKSYKPKDSQVGHLTKN 121 (175)
Q Consensus 81 ~i~~~~~l~~~~---------------~~~~~~~~l~~l~~~l~pgG~~~~~~~~~ 121 (175)
+|++........ ....+..+++++.+.|||||++++++...
T Consensus 159 ~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 159 KILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp EEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred EEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 999863321100 01234689999999999999998875443
No 215
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.44 E-value=9.7e-14 Score=106.74 Aligned_cols=108 Identities=14% Similarity=0.139 Sum_probs=78.9
Q ss_pred CCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCC---CCCCccEEEe
Q 030558 8 ERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPI---PNPDWDLILA 84 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~fD~i~~ 84 (175)
++++|||+|||+|.+++.+++. +.+|+++|+|+.++ +.+++|...++... +..+..+..+.++. ..++||+|++
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~-~~a~~n~~~n~~~~-~~~~~~d~~~~~~~~~~~~~~fD~Ii~ 285 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEAL-RRAEENARLNGLGN-VRVLEANAFDLLRRLEKEGERFDLVVL 285 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHH-HHHHHHHHHTTCTT-EEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHH-HHHHHHHHHcCCCC-ceEEECCHHHHHHHHHhcCCCeeEEEE
Confidence 5789999999999999999988 78899999999998 88888998887732 33333222211111 2468999998
Q ss_pred CCcccCc------ccchHHHHHHHHHHhhcCCCCceeecc
Q 030558 85 SDILLYV------KQYSNLIKSLSVLLKSYKPKDSQVGHL 118 (175)
Q Consensus 85 ~~~l~~~------~~~~~~~~~l~~l~~~l~pgG~~~~~~ 118 (175)
....+.. ........++.++.++|+|||.+++..
T Consensus 286 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 325 (382)
T 1wxx_A 286 DPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATAS 325 (382)
T ss_dssp CCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 6543111 111345688999999999999888863
No 216
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.44 E-value=9.4e-14 Score=107.28 Aligned_cols=109 Identities=16% Similarity=0.110 Sum_probs=79.0
Q ss_pred CCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCC---CCCCccEEEe
Q 030558 8 ERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPI---PNPDWDLILA 84 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~fD~i~~ 84 (175)
++++|||+|||+|.+++.+++....+|+++|+|+.++ +.+++|...++...++..+..+..+..+. ..++||+|++
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l-~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~ 295 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAI-ETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL 295 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHH-HHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHH-HHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEE
Confidence 6889999999999999999887445899999999998 88888988887732333333332221111 2468999999
Q ss_pred CCcccCcc------cchHHHHHHHHHHhhcCCCCceeec
Q 030558 85 SDILLYVK------QYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 85 ~~~l~~~~------~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
....+... .......++.++.+.|+|||.+++.
T Consensus 296 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 334 (396)
T 2as0_A 296 DPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTC 334 (396)
T ss_dssp CCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 65432111 1144668899999999999988775
No 217
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.43 E-value=2.6e-13 Score=102.68 Aligned_cols=97 Identities=13% Similarity=0.052 Sum_probs=75.1
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASD 86 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~ 86 (175)
.++.+|||+|||+|.+++. ++ .+.+|+++|+|+.++ +.+++|...++...++..+..+. ..+. ++||+|++..
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai-~~a~~n~~~n~l~~~v~~~~~D~---~~~~-~~fD~Vi~dp 266 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAI-ELLKKNIKLNKLEHKIIPILSDV---REVD-VKGNRVIMNL 266 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHH-HHHHHHHHHTTCTTTEEEEESCG---GGCC-CCEEEEEECC
T ss_pred CCCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHH-HHHHHHHHHcCCCCcEEEEECCh---HHhc-CCCcEEEECC
Confidence 3688999999999999999 88 478899999999998 88999999888744444444333 2222 7899999964
Q ss_pred cccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 87 ILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 87 ~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
.. +. ..+++.+.+.|+|||.+++.
T Consensus 267 P~-~~------~~~l~~~~~~L~~gG~l~~~ 290 (336)
T 2yx1_A 267 PK-FA------HKFIDKALDIVEEGGVIHYY 290 (336)
T ss_dssp TT-TG------GGGHHHHHHHEEEEEEEEEE
T ss_pred cH-hH------HHHHHHHHHHcCCCCEEEEE
Confidence 32 21 17888999999999977774
No 218
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.43 E-value=7.9e-13 Score=97.87 Aligned_cols=105 Identities=15% Similarity=0.198 Sum_probs=71.5
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeC
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILAS 85 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~ 85 (175)
..++.+|||+|||+|.++..+++. +.+|+++|+|+.++ +.++++....+.. ..+.+..++.......+||+|+++
T Consensus 26 ~~~~~~VLDiG~G~G~lt~~L~~~-~~~v~~vD~~~~~~-~~a~~~~~~~~~~---~~v~~~~~D~~~~~~~~fD~vv~n 100 (285)
T 1zq9_A 26 LRPTDVVLEVGPGTGNMTVKLLEK-AKKVVACELDPRLV-AELHKRVQGTPVA---SKLQVLVGDVLKTDLPFFDTCVAN 100 (285)
T ss_dssp CCTTCEEEEECCTTSTTHHHHHHH-SSEEEEEESCHHHH-HHHHHHHTTSTTG---GGEEEEESCTTTSCCCCCSEEEEE
T ss_pred CCCCCEEEEEcCcccHHHHHHHhh-CCEEEEEECCHHHH-HHHHHHHHhcCCC---CceEEEEcceecccchhhcEEEEe
Confidence 346789999999999999999887 77999999999998 7777666543331 233444444443333489999997
Q ss_pred CcccCcccchHHHHHHH--------------HH--HhhcCCCCceeec
Q 030558 86 DILLYVKQYSNLIKSLS--------------VL--LKSYKPKDSQVGH 117 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~--------------~l--~~~l~pgG~~~~~ 117 (175)
-.+ ++.. +.+..++. |+ .++++|||.++..
T Consensus 101 lpy-~~~~-~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y~~ 146 (285)
T 1zq9_A 101 LPY-QISS-PFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLYCR 146 (285)
T ss_dssp CCG-GGHH-HHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTCSH
T ss_pred cCc-ccch-HHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCcccch
Confidence 664 4432 22223332 23 3589999988654
No 219
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.42 E-value=1.2e-13 Score=94.53 Aligned_cols=97 Identities=10% Similarity=0.082 Sum_probs=68.9
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhC--CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCC--------CCC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAM--NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFP--------IPN 76 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~ 76 (175)
.++.+|||+|||+|.++..+++.. +.+|+++|+++ ++ +. ..+..+..+..+ .+ +.+
T Consensus 21 ~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~-~~-----------~~~~~~~~d~~~-~~~~~~~~~~~~~ 86 (180)
T 1ej0_A 21 KPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MD-PI-----------VGVDFLQGDFRD-ELVMKALLERVGD 86 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CC-CC-----------TTEEEEESCTTS-HHHHHHHHHHHTT
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cc-cc-----------CcEEEEEccccc-chhhhhhhccCCC
Confidence 467899999999999999998874 47899999999 75 21 122333333222 12 345
Q ss_pred CCccEEEeCCcccCcccc--hH------HHHHHHHHHhhcCCCCceeec
Q 030558 77 PDWDLILASDILLYVKQY--SN------LIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 77 ~~fD~i~~~~~l~~~~~~--~~------~~~~l~~l~~~l~pgG~~~~~ 117 (175)
++||+|+++.++++.... +. ...+++++.++|+|||.+++.
T Consensus 87 ~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~ 135 (180)
T 1ej0_A 87 SKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVK 135 (180)
T ss_dssp CCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 789999998876433221 11 158999999999999988885
No 220
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.42 E-value=6.1e-14 Score=105.45 Aligned_cols=106 Identities=16% Similarity=0.174 Sum_probs=72.7
Q ss_pred CCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhC--CCCCCcceeeccCCCC---CCCCCCCccE
Q 030558 8 ERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTN--GITPALPHIKHSWGDA---FPIPNPDWDL 81 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~---~~~~~~~fD~ 81 (175)
++++|||||||+|..+..+++.. +.+|+++|+|+.++ +.++++.... +. ..+.+.+..++. .+..+++||+
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l-~~ar~~~~~~~~~~--~~~~v~~~~~D~~~~l~~~~~~fDv 192 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVI-EVSKIYFKNISCGY--EDKRVNVFIEDASKFLENVTNTYDV 192 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHH-HHHHHHCTTTSGGG--GSTTEEEEESCHHHHHHHCCSCEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHH-HHHHHHHHhhcccc--CCCcEEEEEccHHHHHhhcCCCceE
Confidence 56899999999999999998864 57899999999998 7777665431 11 012233333332 2223568999
Q ss_pred EEeCCcccCcccchHH--HHHHHHHHhhcCCCCceeec
Q 030558 82 ILASDILLYVKQYSNL--IKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 82 i~~~~~l~~~~~~~~~--~~~l~~l~~~l~pgG~~~~~ 117 (175)
|++...- .......+ ..+++++.+.|+|||.+++.
T Consensus 193 Ii~d~~~-p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 229 (321)
T 2pt6_A 193 IIVDSSD-PIGPAETLFNQNFYEKIYNALKPNGYCVAQ 229 (321)
T ss_dssp EEEECCC-SSSGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred EEECCcC-CCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 9985431 11111122 58999999999999988885
No 221
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.42 E-value=1.1e-13 Score=101.99 Aligned_cols=106 Identities=16% Similarity=0.161 Sum_probs=72.5
Q ss_pred CCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhh--CCCCCCcceeeccCCCCC---CCCCCCccE
Q 030558 8 ERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTT--NGITPALPHIKHSWGDAF---PIPNPDWDL 81 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~---~~~~~~fD~ 81 (175)
++++|||||||+|.++..+++.. ..+|+++|+++.++ +.++++... ++. ..+.+.+..++.. +..+++||+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v-~~ar~~~~~~~~~~--~~~rv~v~~~D~~~~l~~~~~~fD~ 151 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVI-EYSKKFLPSIAGKL--DDPRVDVQVDDGFMHIAKSENQYDV 151 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHH-HHHHHHCHHHHTTT--TSTTEEEEESCSHHHHHTCCSCEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHH-HHHHHHhHhhcccc--CCCceEEEECcHHHHHhhCCCCeeE
Confidence 57899999999999999998864 46899999999998 677666532 122 1122333333322 223578999
Q ss_pred EEeCCcccCcccchH--HHHHHHHHHhhcCCCCceeec
Q 030558 82 ILASDILLYVKQYSN--LIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 82 i~~~~~l~~~~~~~~--~~~~l~~l~~~l~pgG~~~~~ 117 (175)
|++.... ....... ...+++++.+.|+|||.+++.
T Consensus 152 Ii~d~~~-~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~ 188 (275)
T 1iy9_A 152 IMVDSTE-PVGPAVNLFTKGFYAGIAKALKEDGIFVAQ 188 (275)
T ss_dssp EEESCSS-CCSCCCCCSTTHHHHHHHHHEEEEEEEEEE
T ss_pred EEECCCC-CCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 9995432 2111100 138999999999999988885
No 222
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.42 E-value=3.9e-13 Score=94.21 Aligned_cols=98 Identities=11% Similarity=0.127 Sum_probs=65.4
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCC---CcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCC-----------
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMN---LDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAF----------- 72 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~---~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 72 (175)
.++.+|||+|||+|.++..+++..+ .+|+|+|+|+... . ..+..+..+..+..
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~~------------~-~~v~~~~~d~~~~~~~~~~~~~~i~ 87 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMDP------------I-PNVYFIQGEIGKDNMNNIKNINYID 87 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCCC------------C-TTCEEEECCTTTTSSCCC-------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccCC------------C-CCceEEEccccchhhhhhccccccc
Confidence 4578999999999999999998753 6899999998320 0 11223332222211
Q ss_pred -------------CCCCCCccEEEeCCcccCc----ccch----HHHHHHHHHHhhcCCCCceeec
Q 030558 73 -------------PIPNPDWDLILASDILLYV----KQYS----NLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 73 -------------~~~~~~fD~i~~~~~l~~~----~~~~----~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
.+.+++||+|++..++.+. .+.. ....+++++.++|+|||.+++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 153 (201)
T 2plw_A 88 NMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVK 153 (201)
T ss_dssp ----CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEE
Confidence 0245689999998765321 1111 1134889999999999988874
No 223
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.42 E-value=6.1e-13 Score=99.29 Aligned_cols=103 Identities=13% Similarity=0.158 Sum_probs=67.6
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeC----ChHHHHHHHHHHHhhCCCCCCcceeeccCC-CCCCCCCCCccE
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDY----NDQEIEDNIAYNSTTNGITPALPHIKHSWG-DAFPIPNPDWDL 81 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~----s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~fD~ 81 (175)
.++.+|||||||+|.++..+++. .+|+++|+ ++.++ +... .... ..+.+.+..+ +....+.++||+
T Consensus 81 ~~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~-~~~~----~~~~--~~~~v~~~~~~D~~~l~~~~fD~ 151 (305)
T 2p41_A 81 TPEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHE-EPIP----MSTY--GWNLVRLQSGVDVFFIPPERCDT 151 (305)
T ss_dssp CCCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSC-CCCC----CCST--TGGGEEEECSCCTTTSCCCCCSE
T ss_pred CCCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHH-HHHH----hhhc--CCCCeEEEeccccccCCcCCCCE
Confidence 45789999999999999999886 58999999 55443 1100 0000 0133444444 555555679999
Q ss_pred EEeCCccc--Cc-ccchHHHHHHHHHHhhcCCCCceeecc
Q 030558 82 ILASDILL--YV-KQYSNLIKSLSVLLKSYKPKDSQVGHL 118 (175)
Q Consensus 82 i~~~~~l~--~~-~~~~~~~~~l~~l~~~l~pgG~~~~~~ 118 (175)
|++..++. ++ .+......+++++.++|||||.|++.+
T Consensus 152 V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv 191 (305)
T 2p41_A 152 LLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKV 191 (305)
T ss_dssp EEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred EEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 99965541 11 111112258899999999999888864
No 224
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.41 E-value=3.6e-13 Score=98.63 Aligned_cols=103 Identities=16% Similarity=0.054 Sum_probs=67.3
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCC-CCc-ceeecc--CCCCCCCCCCCccEE
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGIT-PAL-PHIKHS--WGDAFPIPNPDWDLI 82 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~-~~~-~~~~~~--~~~~~~~~~~~fD~i 82 (175)
.++.+|||||||+|.++..+++. .+|+|+|+++ |+ ..++.+ ... ... ..+.+. .++...+++++||+|
T Consensus 73 ~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~-m~-~~a~~~----~~~~~~~~~~v~~~~~~~D~~~l~~~~fD~V 144 (265)
T 2oxt_A 73 ELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYT-LG-VGGHEV----PRITESYGWNIVKFKSRVDIHTLPVERTDVI 144 (265)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEEC-CC-CSSCCC----CCCCCBTTGGGEEEECSCCTTTSCCCCCSEE
T ss_pred CCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECch-hh-hhhhhh----hhhhhccCCCeEEEecccCHhHCCCCCCcEE
Confidence 46789999999999999999886 7899999998 53 211100 010 000 023333 445444556799999
Q ss_pred EeCCcccCcccc--hH--HHHHHHHHHhhcCCCC--ceeecc
Q 030558 83 LASDILLYVKQY--SN--LIKSLSVLLKSYKPKD--SQVGHL 118 (175)
Q Consensus 83 ~~~~~l~~~~~~--~~--~~~~l~~l~~~l~pgG--~~~~~~ 118 (175)
++..+ ++.... +. ...+++++.++|+||| .|++.+
T Consensus 145 ~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv 185 (265)
T 2oxt_A 145 MCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKV 185 (265)
T ss_dssp EECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred EEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEe
Confidence 99755 232211 11 1248899999999999 888754
No 225
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.41 E-value=7.6e-14 Score=103.12 Aligned_cols=106 Identities=16% Similarity=0.152 Sum_probs=71.1
Q ss_pred CCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhC--CC-----CCCcceeeccCCCCC---CCCCC
Q 030558 8 ERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTN--GI-----TPALPHIKHSWGDAF---PIPNP 77 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~--~~-----~~~~~~~~~~~~~~~---~~~~~ 77 (175)
++++|||||||+|..+..+++....+|+++|+++.++ +.++++. .. +. ....+.+.+..++.. +. ++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i-~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~ 151 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVI-MVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NR 151 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHH-HHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CC
T ss_pred CCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHH-HHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-cC
Confidence 5689999999999999999887445899999999998 6666665 21 11 001123333333322 12 56
Q ss_pred CccEEEeCCcccCcccchHH--HHHHHHHHhhcCCCCceeec
Q 030558 78 DWDLILASDILLYVKQYSNL--IKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 78 ~fD~i~~~~~l~~~~~~~~~--~~~l~~l~~~l~pgG~~~~~ 117 (175)
+||+|++.... .......+ ..+++++.+.|+|||.+++.
T Consensus 152 ~fD~Ii~d~~~-~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~ 192 (281)
T 1mjf_A 152 GFDVIIADSTD-PVGPAKVLFSEEFYRYVYDALNNPGIYVTQ 192 (281)
T ss_dssp CEEEEEEECCC-CC-----TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred CeeEEEECCCC-CCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 89999985442 22111221 58899999999999988885
No 226
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.41 E-value=4e-13 Score=98.19 Aligned_cols=109 Identities=10% Similarity=0.077 Sum_probs=72.2
Q ss_pred CcEEEeCCCc--cHHHHHHHHh--CCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCC---CCC--CCCcc
Q 030558 10 RRCIELGSGT--GALAIFLRKA--MNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAF---PIP--NPDWD 80 (175)
Q Consensus 10 ~~vLDlGcG~--G~~~~~l~~~--~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~fD 80 (175)
.+|||||||+ +.....+++. .+.+|+++|.|+.|+ +.++........ .++..+..+..+.. ..+ .+.||
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mL-a~Ar~~l~~~~~-~~~~~v~aD~~~~~~~l~~~~~~~~~D 157 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVL-TLSQGLLASTPE-GRTAYVEADMLDPASILDAPELRDTLD 157 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHH-HTTHHHHCCCSS-SEEEEEECCTTCHHHHHTCHHHHTTCC
T ss_pred CEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHH-HHHHHHhccCCC-CcEEEEEecccChhhhhcccccccccC
Confidence 6799999997 4444555443 267899999999998 666555443211 22344444433210 000 23454
Q ss_pred -----EEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeecccc
Q 030558 81 -----LILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTK 120 (175)
Q Consensus 81 -----~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~ 120 (175)
.|+++.+|+|..+.++...+++++.+.|+|||.|+++...
T Consensus 158 ~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~ 202 (277)
T 3giw_A 158 LTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGT 202 (277)
T ss_dssp TTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEEC
T ss_pred cCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEecc
Confidence 6888999966666554679999999999999999998433
No 227
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.40 E-value=1.2e-13 Score=102.84 Aligned_cols=108 Identities=10% Similarity=0.045 Sum_probs=70.3
Q ss_pred CCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhh--CCC-CCCcceeeccCCCCCCCCCCCccEEE
Q 030558 8 ERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTT--NGI-TPALPHIKHSWGDAFPIPNPDWDLIL 83 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~fD~i~ 83 (175)
++++|||||||+|..+..+++.. ..+|+++|+++.++ +.++++... ++. ..++..+..+..+.++..+++||+|+
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~-~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVI-EAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHH-HHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHH-HHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 46899999999999999998864 56899999999998 666666532 111 11223332221111222356899999
Q ss_pred eCCcccC-cccch--HHHHHHHHHHhhcCCCCceeec
Q 030558 84 ASDILLY-VKQYS--NLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 84 ~~~~l~~-~~~~~--~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
+...- . ..... ....+++++.+.|+|||.+++.
T Consensus 169 ~d~~~-~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 204 (296)
T 1inl_A 169 IDSTD-PTAGQGGHLFTEEFYQACYDALKEDGVFSAE 204 (296)
T ss_dssp EEC-----------CCSHHHHHHHHHHEEEEEEEEEE
T ss_pred EcCCC-cccCchhhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 84321 1 11111 1158899999999999988886
No 228
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.40 E-value=2.7e-13 Score=101.18 Aligned_cols=104 Identities=14% Similarity=0.116 Sum_probs=72.4
Q ss_pred CcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCC----CCCCCCccEEEe
Q 030558 10 RRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAF----PIPNPDWDLILA 84 (175)
Q Consensus 10 ~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~fD~i~~ 84 (175)
.+|||||||+|.++..+++.. +.+|+++|+++.++ +.++++..... .+.+.+..++.. ...+++||+|++
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi-~~Ar~~~~~~~----~~rv~v~~~Da~~~l~~~~~~~fDvIi~ 165 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELA-RLSREWFDIPR----APRVKIRVDDARMVAESFTPASRDVIIR 165 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHH-HHHHHHSCCCC----TTTEEEEESCHHHHHHTCCTTCEEEEEE
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHH-HHHHHhccccC----CCceEEEECcHHHHHhhccCCCCCEEEE
Confidence 389999999999999998843 67899999999998 77776654321 123344444322 234578999998
Q ss_pred CCcccCcccchHH--HHHHHHHHhhcCCCCceeeccc
Q 030558 85 SDILLYVKQYSNL--IKSLSVLLKSYKPKDSQVGHLT 119 (175)
Q Consensus 85 ~~~l~~~~~~~~~--~~~l~~l~~~l~pgG~~~~~~~ 119 (175)
.... .......+ ..+++++.++|+|||.+++...
T Consensus 166 D~~~-~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 166 DVFA-GAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp CCST-TSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCC-ccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 5322 11111111 4899999999999998888643
No 229
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.40 E-value=3.8e-13 Score=99.06 Aligned_cols=104 Identities=10% Similarity=-0.003 Sum_probs=67.4
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhh-CCCCCCcceeecc--CCCCCCCCCCCccEEE
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTT-NGITPALPHIKHS--WGDAFPIPNPDWDLIL 83 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~fD~i~ 83 (175)
.++.+|||||||+|.++..+++. .+|+|+|+++ |+ ..++.+... .... ..+.+. .++...+++++||+|+
T Consensus 81 ~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~-m~-~~a~~~~~~~~~~~---~~v~~~~~~~D~~~l~~~~fD~Vv 153 (276)
T 2wa2_A 81 ELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT-LG-TSGHEKPRLVETFG---WNLITFKSKVDVTKMEPFQADTVL 153 (276)
T ss_dssp CCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC-CC-CTTSCCCCCCCCTT---GGGEEEECSCCGGGCCCCCCSEEE
T ss_pred CCCCEEEEeccCCCHHHHHHHHc--CCEEEEECch-hh-hhhhhchhhhhhcC---CCeEEEeccCcHhhCCCCCcCEEE
Confidence 46789999999999999999886 6899999999 63 221111000 0000 023333 4444444567999999
Q ss_pred eCCcccCcccc----hHHHHHHHHHHhhcCCCC--ceeecc
Q 030558 84 ASDILLYVKQY----SNLIKSLSVLLKSYKPKD--SQVGHL 118 (175)
Q Consensus 84 ~~~~l~~~~~~----~~~~~~l~~l~~~l~pgG--~~~~~~ 118 (175)
+..+ ++.... .....+++++.++|+||| .|++.+
T Consensus 154 sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~ 193 (276)
T 2wa2_A 154 CDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKV 193 (276)
T ss_dssp ECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEE
T ss_pred ECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEe
Confidence 9766 332211 111247899999999999 888754
No 230
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.39 E-value=1.3e-13 Score=103.34 Aligned_cols=106 Identities=18% Similarity=0.234 Sum_probs=70.1
Q ss_pred CCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhC--CCCCCcceeeccCCCCC---CCCCCCccE
Q 030558 8 ERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTN--GITPALPHIKHSWGDAF---PIPNPDWDL 81 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~---~~~~~~fD~ 81 (175)
++++|||||||+|..+..+++.. ..+|+++|+++.++ +.++++.... +. ..+.+.+..++.. +..+++||+
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i-~~Ar~~~~~~~~~~--~~~rv~~~~~D~~~~l~~~~~~fD~ 184 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVI-DVAKKFLPGMSCGF--SHPKLDLFCGDGFEFLKNHKNEFDV 184 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHH-HHHHHHCTTTSGGG--GCTTEEEECSCHHHHHHHCTTCEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHH-HHHHHHHHHhcccc--CCCCEEEEEChHHHHHHhcCCCceE
Confidence 46899999999999999998864 46899999999998 7777665432 11 0123333344322 224578999
Q ss_pred EEeCCcccCcccchHH--HHHHHHHHhhcCCCCceeec
Q 030558 82 ILASDILLYVKQYSNL--IKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 82 i~~~~~l~~~~~~~~~--~~~l~~l~~~l~pgG~~~~~ 117 (175)
|++...- .......+ ..+++++.++|+|||.+++.
T Consensus 185 Ii~d~~~-~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~ 221 (314)
T 2b2c_A 185 IITDSSD-PVGPAESLFGQSYYELLRDALKEDGILSSQ 221 (314)
T ss_dssp EEECCC--------------HHHHHHHHEEEEEEEEEE
T ss_pred EEEcCCC-CCCcchhhhHHHHHHHHHhhcCCCeEEEEE
Confidence 9985432 11111112 58999999999999988885
No 231
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.39 E-value=2.1e-13 Score=102.32 Aligned_cols=108 Identities=12% Similarity=0.102 Sum_probs=73.1
Q ss_pred CCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhh--CC-C-CCCcceeeccCCCCCCCCCCCccEE
Q 030558 8 ERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTT--NG-I-TPALPHIKHSWGDAFPIPNPDWDLI 82 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~--~~-~-~~~~~~~~~~~~~~~~~~~~~fD~i 82 (175)
++++|||||||+|..+..+++.. ..+|+++|+++.++ +.++++... .+ . ..++..+..+..+.++..+++||+|
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i-~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELV-EVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHH-HHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHH-HHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 56899999999999999998864 56899999999998 666665532 11 1 1122322222211122235789999
Q ss_pred EeCCcccCc---ccchH--HHHHHHHHHhhcCCCCceeec
Q 030558 83 LASDILLYV---KQYSN--LIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 83 ~~~~~l~~~---~~~~~--~~~~l~~l~~~l~pgG~~~~~ 117 (175)
++.... +. ..... ...+++++.++|+|||.+++.
T Consensus 156 i~d~~~-~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 194 (314)
T 1uir_A 156 IIDLTD-PVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQ 194 (314)
T ss_dssp EEECCC-CBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred EECCCC-cccccCcchhccHHHHHHHHHHhcCCCcEEEEE
Confidence 997554 22 11111 258999999999999988886
No 232
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.39 E-value=1.3e-13 Score=102.86 Aligned_cols=107 Identities=11% Similarity=0.103 Sum_probs=70.8
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhh--CCCCCCcceeeccCCCC---CCCCCCCcc
Q 030558 7 IERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTT--NGITPALPHIKHSWGDA---FPIPNPDWD 80 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~---~~~~~~~fD 80 (175)
.++++|||||||+|..+..+++.. ..+|+++|+++.++ +.++++... .+. ..+.+.+..++. ++..+++||
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i-~~ar~~~~~~~~~~--~~~rv~v~~~Da~~~l~~~~~~fD 170 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVI-QVSKKFLPGMAIGY--SSSKLTLHVGDGFEFMKQNQDAFD 170 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHH-HHHHHHCHHHHGGG--GCTTEEEEESCHHHHHHTCSSCEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHH-HHHHHHhHHhhccc--CCCcEEEEECcHHHHHhhCCCCce
Confidence 356899999999999999998864 46899999999998 666666543 111 011233333332 223457899
Q ss_pred EEEeCCcccCcccch--HHHHHHHHHHhhcCCCCceeec
Q 030558 81 LILASDILLYVKQYS--NLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 81 ~i~~~~~l~~~~~~~--~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
+|++.... ...... ....+++++.++|+|||.+++.
T Consensus 171 ~Ii~d~~~-~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 208 (304)
T 2o07_A 171 VIITDSSD-PMGPAESLFKESYYQLMKTALKEDGVLCCQ 208 (304)
T ss_dssp EEEEECC------------CHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECCCC-CCCcchhhhHHHHHHHHHhccCCCeEEEEe
Confidence 99985432 111111 1247899999999999988875
No 233
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.38 E-value=2.2e-13 Score=100.74 Aligned_cols=109 Identities=15% Similarity=0.117 Sum_probs=73.3
Q ss_pred CCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCC---CCCCCCccEEE
Q 030558 8 ERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAF---PIPNPDWDLIL 83 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~fD~i~ 83 (175)
++++|||||||+|..+..+++.. ..+|+++|+++.++ +.++++....+.....+.+.+..++.. +..+++||+|+
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i-~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVI-EVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHH-HHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHH-HHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 56899999999999999998764 46899999999998 677666543210000122333333322 22357899999
Q ss_pred eCCcccCcccchHH--HHHHHHHHhhcCCCCceeecc
Q 030558 84 ASDILLYVKQYSNL--IKSLSVLLKSYKPKDSQVGHL 118 (175)
Q Consensus 84 ~~~~l~~~~~~~~~--~~~l~~l~~~l~pgG~~~~~~ 118 (175)
+.... .......+ ..+++++.++|+|||.+++..
T Consensus 157 ~d~~~-~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 157 VDSSD-PIGPAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp EECCC-TTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EcCCC-CCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 85332 22212222 589999999999999888763
No 234
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.38 E-value=2.3e-12 Score=101.02 Aligned_cols=113 Identities=13% Similarity=0.055 Sum_probs=77.1
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCC--CcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCC-CCCCCccEE
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMN--LDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFP-IPNPDWDLI 82 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~--~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~fD~i 82 (175)
..++.+|||+|||+|..+..+++..+ .+|+++|+++.++ +.++.+....+.. .+..+..+..+..+ +.+++||+|
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l-~~~~~~~~~~g~~-~v~~~~~D~~~~~~~~~~~~fD~V 334 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRM-KRLKDFVKRMGIK-IVKPLVKDARKAPEIIGEEVADKV 334 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHH-HHHHHHHHHTTCC-SEEEECSCTTCCSSSSCSSCEEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHH-HHHHHHHHHcCCC-cEEEEEcChhhcchhhccCCCCEE
Confidence 34678999999999999999988653 6899999999998 7778887776662 23333222222211 334689999
Q ss_pred EeCC------cccCcccc------h-------HHHHHHHHHHhhcCCCCceeecccc
Q 030558 83 LASD------ILLYVKQY------S-------NLIKSLSVLLKSYKPKDSQVGHLTK 120 (175)
Q Consensus 83 ~~~~------~l~~~~~~------~-------~~~~~l~~l~~~l~pgG~~~~~~~~ 120 (175)
++.. ++...++. . .+..+++++.+.|||||++++++..
T Consensus 335 l~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs 391 (450)
T 2yxl_A 335 LLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCS 391 (450)
T ss_dssp EEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESC
T ss_pred EEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 9632 22111111 0 1257899999999999999886443
No 235
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.38 E-value=1.4e-12 Score=90.89 Aligned_cols=99 Identities=15% Similarity=0.067 Sum_probs=64.9
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCC----------CcEEEEeCChHHHHHHHHHHHhhCCCCCCccee-eccCCCCC---
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMN----------LDITTSDYNDQEIEDNIAYNSTTNGITPALPHI-KHSWGDAF--- 72 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~----------~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--- 72 (175)
.++.+|||+|||+|.++..+++..+ .+|+++|+|+... . ..+..+ ..+..+..
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~------------~-~~~~~~~~~d~~~~~~~~ 87 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP------------L-EGATFLCPADVTDPRTSQ 87 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC------------C-TTCEEECSCCTTSHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhccc------------C-CCCeEEEeccCCCHHHHH
Confidence 4678999999999999999999854 6899999998420 0 111222 22211110
Q ss_pred ----CCCCCCccEEEeCCcccC---c-ccch----HHHHHHHHHHhhcCCCCceeecc
Q 030558 73 ----PIPNPDWDLILASDILLY---V-KQYS----NLIKSLSVLLKSYKPKDSQVGHL 118 (175)
Q Consensus 73 ----~~~~~~fD~i~~~~~l~~---~-~~~~----~~~~~l~~l~~~l~pgG~~~~~~ 118 (175)
.+.+++||+|++..++.. + .+.. ....+++++.++|+|||++++..
T Consensus 88 ~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 145 (196)
T 2nyu_A 88 RILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKT 145 (196)
T ss_dssp HHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence 022458999999654321 1 1111 11488999999999999988853
No 236
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.37 E-value=2e-12 Score=101.97 Aligned_cols=105 Identities=12% Similarity=0.171 Sum_probs=75.5
Q ss_pred CCCcEEEeCCCccHHHHHHHHhC--CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCC---CCCCccEE
Q 030558 8 ERRRCIELGSGTGALAIFLRKAM--NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPI---PNPDWDLI 82 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~--~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~fD~i 82 (175)
++.+|||+|||+|..+..+++.. ...|+++|+++.++ +.++++....+. ..+.+..++...+ .+++||.|
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l-~~~~~n~~r~g~----~nv~~~~~D~~~~~~~~~~~fD~I 191 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRV-KVLHANISRCGI----SNVALTHFDGRVFGAAVPEMFDAI 191 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHH-HHHHHHHHHHTC----CSEEEECCCSTTHHHHSTTCEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHHcCC----CcEEEEeCCHHHhhhhccccCCEE
Confidence 68899999999999999999875 36799999999998 778888777665 2233333333221 35689999
Q ss_pred EeCCc------ccCcccc-------------hHHHHHHHHHHhhcCCCCceeec
Q 030558 83 LASDI------LLYVKQY-------------SNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 83 ~~~~~------l~~~~~~-------------~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
++... +...++. ..+..+++++.++|||||+++++
T Consensus 192 l~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~Lvys 245 (479)
T 2frx_A 192 LLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYS 245 (479)
T ss_dssp EEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 98322 1111110 12357899999999999999986
No 237
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.37 E-value=2.9e-13 Score=102.21 Aligned_cols=109 Identities=8% Similarity=0.069 Sum_probs=72.6
Q ss_pred CCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhC--CC-CCCcceeeccCCCCCC-CCCCCccEE
Q 030558 8 ERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTN--GI-TPALPHIKHSWGDAFP-IPNPDWDLI 82 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~-~~~~~fD~i 82 (175)
++++|||||||+|..+..+++.. ..+|+++|+|+.++ +.++++.... +. ..++..+..+..+.++ ..+++||+|
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l-~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVV-DVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHH-HHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHH-HHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 56899999999999999998864 46899999999998 6666665431 11 1122333322211111 235689999
Q ss_pred EeCCccc-CcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 83 LASDILL-YVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 83 ~~~~~l~-~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
++...-. +....-....+++++.++|+|||.+++.
T Consensus 199 i~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 199 IVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp EECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred EECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 9854321 1111101358999999999999998885
No 238
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.37 E-value=3.8e-12 Score=99.03 Aligned_cols=98 Identities=16% Similarity=0.196 Sum_probs=70.8
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASD 86 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~ 86 (175)
.++.+|||+|||+|.+++.+++. +.+|+|+|+|+.++ +.+++|...++.. +..+ .++.......+||+|++..
T Consensus 289 ~~~~~VLDlgcG~G~~sl~la~~-~~~V~gvD~s~~ai-~~A~~n~~~ngl~--v~~~---~~d~~~~~~~~fD~Vv~dP 361 (425)
T 2jjq_A 289 VEGEKILDMYSGVGTFGIYLAKR-GFNVKGFDSNEFAI-EMARRNVEINNVD--AEFE---VASDREVSVKGFDTVIVDP 361 (425)
T ss_dssp CCSSEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHH-HHHHHHHHHHTCC--EEEE---ECCTTTCCCTTCSEEEECC
T ss_pred CCCCEEEEeeccchHHHHHHHHc-CCEEEEEECCHHHH-HHHHHHHHHcCCc--EEEE---ECChHHcCccCCCEEEEcC
Confidence 35789999999999999999886 77999999999998 8888888877762 3333 3333333233899999965
Q ss_pred cccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 87 ILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 87 ~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
.. . ... ..+++.+. .++|+|.++++
T Consensus 362 Pr-~--g~~--~~~~~~l~-~l~p~givyvs 386 (425)
T 2jjq_A 362 PR-A--GLH--PRLVKRLN-REKPGVIVYVS 386 (425)
T ss_dssp CT-T--CSC--HHHHHHHH-HHCCSEEEEEE
T ss_pred Cc-c--chH--HHHHHHHH-hcCCCcEEEEE
Confidence 52 1 111 13555554 48999988886
No 239
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.36 E-value=4.8e-12 Score=94.25 Aligned_cols=101 Identities=18% Similarity=0.212 Sum_probs=69.5
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeC
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILAS 85 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~ 85 (175)
..++.+|||+|||+|.++..+++. +.+|+|+|+++.++ +.++++....+. +.+.+..++......++||+|+++
T Consensus 40 ~~~~~~VLDiG~G~G~lt~~La~~-~~~v~~vDi~~~~~-~~a~~~~~~~~~----~~v~~~~~D~~~~~~~~~D~Vv~n 113 (299)
T 2h1r_A 40 IKSSDIVLEIGCGTGNLTVKLLPL-AKKVITIDIDSRMI-SEVKKRCLYEGY----NNLEVYEGDAIKTVFPKFDVCTAN 113 (299)
T ss_dssp CCTTCEEEEECCTTSTTHHHHTTT-SSEEEEECSCHHHH-HHHHHHHHHTTC----CCEEC----CCSSCCCCCSEEEEE
T ss_pred CCCcCEEEEEcCcCcHHHHHHHhc-CCEEEEEECCHHHH-HHHHHHHHHcCC----CceEEEECchhhCCcccCCEEEEc
Confidence 346789999999999999999887 77999999999998 777777655444 234444555444444589999997
Q ss_pred CcccCcccchHHHHHH---------------HHHHhhcCCCCce
Q 030558 86 DILLYVKQYSNLIKSL---------------SVLLKSYKPKDSQ 114 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l---------------~~l~~~l~pgG~~ 114 (175)
... ++. .+.+..++ +...|+++++|..
T Consensus 114 ~py-~~~-~~~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~~G~~ 155 (299)
T 2h1r_A 114 IPY-KIS-SPLIFKLISHRPLFKCAVLMFQKEFAERMLANVGDS 155 (299)
T ss_dssp CCG-GGH-HHHHHHHHHCSSCCSEEEEEEEHHHHHHHTCCTTST
T ss_pred CCc-ccc-cHHHHHHHhcCCccceeeehHHHHHHHHHhcCCCCc
Confidence 654 544 23333444 3466788887743
No 240
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.35 E-value=6.3e-13 Score=92.86 Aligned_cols=97 Identities=13% Similarity=0.138 Sum_probs=64.7
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCC-------CC---C
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFP-------IP---N 76 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~---~ 76 (175)
.++.+|||+|||+|.++..+++. +.+|+|+|+++... . ..+..+..+..+... +. .
T Consensus 24 ~~g~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~~~------------~-~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (191)
T 3dou_A 24 RKGDAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEMEE------------I-AGVRFIRCDIFKETIFDDIDRALREEGI 89 (191)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT-CSEEEEEESSCCCC------------C-TTCEEEECCTTSSSHHHHHHHHHHHHTC
T ss_pred CCCCEEEEEeecCCHHHHHHHHc-CCcEEEEecccccc------------C-CCeEEEEccccCHHHHHHHHHHhhcccC
Confidence 46889999999999999999887 88999999998421 1 122344333322110 00 1
Q ss_pred CCccEEEeCCcccCc--------ccchHHHHHHHHHHhhcCCCCceeec
Q 030558 77 PDWDLILASDILLYV--------KQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 77 ~~fD~i~~~~~l~~~--------~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
++||+|++....... ...+....+++.+.++|+|||.|++.
T Consensus 90 ~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k 138 (191)
T 3dou_A 90 EKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLK 138 (191)
T ss_dssp SSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEE
Confidence 489999996432110 01122357888999999999988874
No 241
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.34 E-value=4.3e-13 Score=105.00 Aligned_cols=109 Identities=11% Similarity=0.034 Sum_probs=75.9
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCC--CcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEE
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMN--LDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLIL 83 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~--~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~ 83 (175)
..++.+|||+|||+|..+..+++..+ ..|+++|+|+.++ +.+++|....+.. +..+..+..+.....+++||+|+
T Consensus 99 ~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l-~~a~~n~~r~G~~--v~~~~~Da~~l~~~~~~~FD~Il 175 (464)
T 3m6w_A 99 PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRV-RGLLENVERWGAP--LAVTQAPPRALAEAFGTYFHRVL 175 (464)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHH-HHHHHHHHHHCCC--CEEECSCHHHHHHHHCSCEEEEE
T ss_pred cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHHcCCe--EEEEECCHHHhhhhccccCCEEE
Confidence 34688999999999999999998753 5799999999998 8888888877762 22222221111112357899999
Q ss_pred eCCc------ccCcccc-------------hHHHHHHHHHHhhcCCCCceeec
Q 030558 84 ASDI------LLYVKQY-------------SNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 84 ~~~~------l~~~~~~-------------~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
+... +...++. ..+..+++++.++|||||+++++
T Consensus 176 ~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~Lvys 228 (464)
T 3m6w_A 176 LDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYS 228 (464)
T ss_dssp EECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred ECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 6322 1111111 12368999999999999999886
No 242
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.33 E-value=3.6e-12 Score=99.42 Aligned_cols=111 Identities=11% Similarity=0.061 Sum_probs=76.8
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCC-CcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCC-CCCCCccEEE
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMN-LDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFP-IPNPDWDLIL 83 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~fD~i~ 83 (175)
..++.+|||+|||+|..+..+++... .+|+++|+++.++ +.++.+....+.. +..+..+..+..+ +.+++||+|+
T Consensus 244 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l-~~~~~~~~~~g~~--~~~~~~D~~~~~~~~~~~~fD~Vl 320 (429)
T 1sqg_A 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRL-SRVYDNLKRLGMK--ATVKQGDGRYPSQWCGEQQFDRIL 320 (429)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTH-HHHHHHHHHTTCC--CEEEECCTTCTHHHHTTCCEEEEE
T ss_pred CCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHHHHHcCCC--eEEEeCchhhchhhcccCCCCEEE
Confidence 34678999999999999999998753 6899999999998 7777787776652 2333322222111 2346899999
Q ss_pred eCCc------ccCcccc------h-------HHHHHHHHHHhhcCCCCceeeccc
Q 030558 84 ASDI------LLYVKQY------S-------NLIKSLSVLLKSYKPKDSQVGHLT 119 (175)
Q Consensus 84 ~~~~------l~~~~~~------~-------~~~~~l~~l~~~l~pgG~~~~~~~ 119 (175)
+... +...++. . .+..+++++.+.|||||++++++.
T Consensus 321 ~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystc 375 (429)
T 1sqg_A 321 LDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATC 375 (429)
T ss_dssp EECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEES
T ss_pred EeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 7322 1111110 1 125889999999999999988743
No 243
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.31 E-value=1.2e-12 Score=102.38 Aligned_cols=107 Identities=13% Similarity=0.021 Sum_probs=76.0
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhC--CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCC---CCCCCcc
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAM--NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFP---IPNPDWD 80 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~fD 80 (175)
..++.+|||+|||+|..+..+++.. ...|+++|+++.++ +.+++|....+.. .+.+..++... ..+++||
T Consensus 103 ~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl-~~~~~n~~r~g~~----nv~v~~~Da~~l~~~~~~~FD 177 (456)
T 3m4x_A 103 AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRA-KILSENIERWGVS----NAIVTNHAPAELVPHFSGFFD 177 (456)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHH-HHHHHHHHHHTCS----SEEEECCCHHHHHHHHTTCEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHH-HHHHHHHHHcCCC----ceEEEeCCHHHhhhhccccCC
Confidence 3468899999999999999998864 35799999999998 7888888877762 23333333221 2357899
Q ss_pred EEEeCCcc------cCccc---------c----hHHHHHHHHHHhhcCCCCceeec
Q 030558 81 LILASDIL------LYVKQ---------Y----SNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 81 ~i~~~~~l------~~~~~---------~----~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
+|++.... ...++ . ..+..+++++.++|||||+++++
T Consensus 178 ~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYs 233 (456)
T 3m4x_A 178 RIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYS 233 (456)
T ss_dssp EEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred EEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 99984431 11000 0 12347899999999999999886
No 244
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.30 E-value=4.5e-13 Score=97.99 Aligned_cols=97 Identities=13% Similarity=0.013 Sum_probs=69.0
Q ss_pred CCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhh--CCCCCCcceeeccCCCCCCCCCCCccEEEeC
Q 030558 8 ERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTT--NGITPALPHIKHSWGDAFPIPNPDWDLILAS 85 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~ 85 (175)
.+++|||||||+|..+..+++. +.+|+++|+++.++ +.++++... .+. ..+.+.+..++...+. ++||+|++.
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~-~~~v~~veid~~~i-~~ar~~~~~~~~~~--~~~rv~~~~~D~~~~~-~~fD~Ii~d 146 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY-DTHIDFVQADEKIL-DSFISFFPHFHEVK--NNKNFTHAKQLLDLDI-KKYDLIFCL 146 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS-SCEEEEECSCHHHH-GGGTTTSTTHHHHH--TCTTEEEESSGGGSCC-CCEEEEEES
T ss_pred CCCEEEEEeCCcCHHHHHHHhC-CCEEEEEECCHHHH-HHHHHHHHhhcccc--CCCeEEEEechHHHHH-hhCCEEEEC
Confidence 4689999999999999999887 57899999999997 555443221 001 0123344444444443 789999986
Q ss_pred CcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
. .+.. .+++++.+.|+|||.+++.
T Consensus 147 ~-----~dp~---~~~~~~~~~L~pgG~lv~~ 170 (262)
T 2cmg_A 147 Q-----EPDI---HRIDGLKRMLKEDGVFISV 170 (262)
T ss_dssp S-----CCCH---HHHHHHHTTEEEEEEEEEE
T ss_pred C-----CChH---HHHHHHHHhcCCCcEEEEE
Confidence 2 2222 5899999999999988885
No 245
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.30 E-value=3.9e-12 Score=96.51 Aligned_cols=105 Identities=10% Similarity=0.064 Sum_probs=75.4
Q ss_pred CCCcEEEeCCCccHHHHHHHHhCC------CcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCC-CCCCCcc
Q 030558 8 ERRRCIELGSGTGALAIFLRKAMN------LDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFP-IPNPDWD 80 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~~------~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~fD 80 (175)
++.+|||+|||+|.++..+++... .+++|+|+++.++ +.++.+....+. . +.+..++.+. ...++||
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~-~~a~~n~~~~g~--~---~~i~~~D~l~~~~~~~fD 203 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLI-SLALVGADLQRQ--K---MTLLHQDGLANLLVDPVD 203 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHH-HHHHHHHHHHTC--C---CEEEESCTTSCCCCCCEE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHH-HHHHHHHHhCCC--C---ceEEECCCCCccccCCcc
Confidence 467899999999999998887652 6799999999998 777777665554 2 2233333332 3356899
Q ss_pred EEEeCCcccCcccch---------------HHHHHHHHHHhhcCCCCceeecc
Q 030558 81 LILASDILLYVKQYS---------------NLIKSLSVLLKSYKPKDSQVGHL 118 (175)
Q Consensus 81 ~i~~~~~l~~~~~~~---------------~~~~~l~~l~~~l~pgG~~~~~~ 118 (175)
+|+++..+.++...+ ....+++++.+.|+|||++++.+
T Consensus 204 ~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~ 256 (344)
T 2f8l_A 204 VVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLV 256 (344)
T ss_dssp EEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEE
Confidence 999998853332111 11268999999999999888874
No 246
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.28 E-value=1.6e-12 Score=99.37 Aligned_cols=94 Identities=16% Similarity=0.178 Sum_probs=66.7
Q ss_pred CCCcEEEeCCC------ccHHHHHHHHhC--CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCC----
Q 030558 8 ERRRCIELGSG------TGALAIFLRKAM--NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIP---- 75 (175)
Q Consensus 8 ~~~~vLDlGcG------~G~~~~~l~~~~--~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 75 (175)
++.+||||||| +|..++.+++.. +.+|+++|+|+.|. . ...++..+..+.. .+++.
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~-~----------~~~rI~fv~GDa~-dlpf~~~l~ 283 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH-V----------DELRIRTIQGDQN-DAEFLDRIA 283 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG-G----------CBTTEEEEECCTT-CHHHHHHHH
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh-h----------cCCCcEEEEeccc-ccchhhhhh
Confidence 57899999999 777777777652 67899999999873 1 1112333333222 22233
Q ss_pred --CCCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 76 --NPDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 76 --~~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
+++||+|++..+. + ..+...++++++++|||||.+++.
T Consensus 284 ~~d~sFDlVisdgsH-~---~~d~~~aL~el~rvLKPGGvlVi~ 323 (419)
T 3sso_A 284 RRYGPFDIVIDDGSH-I---NAHVRTSFAALFPHVRPGGLYVIE 323 (419)
T ss_dssp HHHCCEEEEEECSCC-C---HHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred cccCCccEEEECCcc-c---chhHHHHHHHHHHhcCCCeEEEEE
Confidence 5799999986542 3 346679999999999999998886
No 247
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.27 E-value=2.5e-11 Score=94.76 Aligned_cols=101 Identities=13% Similarity=0.175 Sum_probs=72.7
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCC---CCCCCCccEEE
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAF---PIPNPDWDLIL 83 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~fD~i~ 83 (175)
.++.+|||+|||+|.+++.+++. +.+|+|+|+|+.++ +.+++|...++.. ++..+..+..+.+ ++.+++||+|+
T Consensus 285 ~~~~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al-~~A~~n~~~~~~~-~v~f~~~d~~~~l~~~~~~~~~fD~Vv 361 (433)
T 1uwv_A 285 QPEDRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALV-EKGQQNARLNGLQ-NVTFYHENLEEDVTKQPWAKNGFDKVL 361 (433)
T ss_dssp CTTCEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHH-HHHHHHHHHTTCC-SEEEEECCTTSCCSSSGGGTTCCSEEE
T ss_pred CCCCEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHH-HHHHHHHHHcCCC-ceEEEECCHHHHhhhhhhhcCCCCEEE
Confidence 35689999999999999999887 78999999999998 8888888887762 4445544444332 23456899999
Q ss_pred eCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 84 ASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 84 ~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
+.... .. .. .+++.+.+ ++|++.++++
T Consensus 362 ~dPPr-~g--~~---~~~~~l~~-~~p~~ivyvs 388 (433)
T 1uwv_A 362 LDPAR-AG--AA---GVMQQIIK-LEPIRIVYVS 388 (433)
T ss_dssp ECCCT-TC--CH---HHHHHHHH-HCCSEEEEEE
T ss_pred ECCCC-cc--HH---HHHHHHHh-cCCCeEEEEE
Confidence 96553 11 12 45555543 6888766664
No 248
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.27 E-value=2.6e-12 Score=98.44 Aligned_cols=99 Identities=16% Similarity=0.082 Sum_probs=73.2
Q ss_pred CCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhC---------------CCCCCcceeeccCCCC
Q 030558 8 ERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTN---------------GITPALPHIKHSWGDA 71 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~ 71 (175)
++.+|||+|||+|..++.++++. +.+|+++|+++.++ +.+++|...+ +.. .+.+..+|.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av-~~a~~N~~~n~~~~~~~~~~~~~~~gl~----~i~v~~~Da 121 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAY-ELMKRNVMLNFDGELRESKGRAILKGEK----TIVINHDDA 121 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHH-HHHHHHHHHHCCSCCEECSSEEEEESSS----EEEEEESCH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHH-HHHHHHHHHhcccccccccccccccCCC----ceEEEcCcH
Confidence 67899999999999999999974 56799999999998 8888888887 441 133333332
Q ss_pred C---CCCCCCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeecc
Q 030558 72 F---PIPNPDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHL 118 (175)
Q Consensus 72 ~---~~~~~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~ 118 (175)
. ....++||+|+.. .. .. . ..++..+.+.++|||.++++.
T Consensus 122 ~~~~~~~~~~fD~I~lD-P~-~~--~---~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 122 NRLMAERHRYFHFIDLD-PF-GS--P---MEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHHHHHSTTCEEEEEEC-CS-SC--C---HHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHhccCCCCEEEeC-CC-CC--H---HHHHHHHHHhcCCCCEEEEEe
Confidence 1 1113579999964 33 21 1 278889999999999888764
No 249
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.25 E-value=4.9e-12 Score=97.13 Aligned_cols=103 Identities=12% Similarity=-0.053 Sum_probs=76.2
Q ss_pred CCCcEEEeCCCccHHHHHHHHhC-C-CcEEEEeCChHHHHHHHHHHHhhCCCCCC-cceeeccCCCCCC-CCCCCccEEE
Q 030558 8 ERRRCIELGSGTGALAIFLRKAM-N-LDITTSDYNDQEIEDNIAYNSTTNGITPA-LPHIKHSWGDAFP-IPNPDWDLIL 83 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~-~-~~v~~~D~s~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~fD~i~ 83 (175)
+|.+|||++||+|.+++.++++. + .+|+++|+++.++ +.+++|.+.+++..+ +..+..+..+.+. ...++||+|+
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av-~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~ 130 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAI-EIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVD 130 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHH-HHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEE
Confidence 47899999999999999999863 3 6799999999998 899999999988432 3333322211121 2245799999
Q ss_pred eCCcccCcccchHHHHHHHHHHhhcCCCCceeecc
Q 030558 84 ASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHL 118 (175)
Q Consensus 84 ~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~ 118 (175)
+.. |.. . ..++..+.+.++|||.++++.
T Consensus 131 lDP--~g~--~---~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 131 LDP--FGT--P---VPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp ECC--SSC--C---HHHHHHHHHHEEEEEEEEEEE
T ss_pred ECC--CcC--H---HHHHHHHHHHhCCCCEEEEEe
Confidence 865 221 1 268888999999999888874
No 250
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.22 E-value=1.1e-10 Score=89.99 Aligned_cols=112 Identities=14% Similarity=0.133 Sum_probs=77.1
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCC---------------------------------------CcEEEEeCChHHHHH
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMN---------------------------------------LDITTSDYNDQEIED 46 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~---------------------------------------~~v~~~D~s~~~l~~ 46 (175)
+.++.+|||.+||+|.+.+.++.... .+|+|+|+|+.++ +
T Consensus 199 ~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al-~ 277 (393)
T 3k0b_A 199 WHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLI-E 277 (393)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHH-H
T ss_pred CCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHH-H
Confidence 44678899999999999998877532 3599999999998 8
Q ss_pred HHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCCcccC-cccchHHHHHHHHHHhhcCC--CCceeecccc
Q 030558 47 NIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASDILLY-VKQYSNLIKSLSVLLKSYKP--KDSQVGHLTK 120 (175)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~~l~~-~~~~~~~~~~l~~l~~~l~p--gG~~~~~~~~ 120 (175)
.++.|....+....+..+..+..+. +. ..+||+|+++..+.. ....+++..+.+++.+.+++ ||.+++.+..
T Consensus 278 ~Ar~Na~~~gl~~~I~~~~~D~~~~-~~-~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~ 352 (393)
T 3k0b_A 278 IAKQNAVEAGLGDLITFRQLQVADF-QT-EDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLTSY 352 (393)
T ss_dssp HHHHHHHHTTCTTCSEEEECCGGGC-CC-CCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEECC
T ss_pred HHHHHHHHcCCCCceEEEECChHhC-CC-CCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 8888988888754444444444322 22 358999999966411 12223455566666666655 8888877543
No 251
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.20 E-value=8.8e-11 Score=90.30 Aligned_cols=111 Identities=13% Similarity=0.111 Sum_probs=76.9
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCC---------------------------------------CcEEEEeCChHHHHH
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMN---------------------------------------LDITTSDYNDQEIED 46 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~---------------------------------------~~v~~~D~s~~~l~~ 46 (175)
+.++.+|||++||+|.+++.++.... .+|+|+|+++.++ +
T Consensus 193 ~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai-~ 271 (385)
T 3ldu_A 193 WKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESI-D 271 (385)
T ss_dssp CCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHH-H
T ss_pred CCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHH-H
Confidence 44678999999999999999877531 4699999999998 8
Q ss_pred HHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCCcccC-cccchHHHHHHHHHHhhcCC--CCceeeccc
Q 030558 47 NIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASDILLY-VKQYSNLIKSLSVLLKSYKP--KDSQVGHLT 119 (175)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~~l~~-~~~~~~~~~~l~~l~~~l~p--gG~~~~~~~ 119 (175)
.++.|...++....+.....+..+. + .+.+||+|+++..+.. ....+++..+.+++.+.+++ |+.+++.+.
T Consensus 272 ~Ar~Na~~~gl~~~i~~~~~D~~~l-~-~~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 345 (385)
T 3ldu_A 272 IARENAEIAGVDEYIEFNVGDATQF-K-SEDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLITS 345 (385)
T ss_dssp HHHHHHHHHTCGGGEEEEECCGGGC-C-CSCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEES
T ss_pred HHHHHHHHcCCCCceEEEECChhhc-C-cCCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEEC
Confidence 8888888877633333333333222 2 2358999999877521 12234556677777777776 777777644
No 252
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.19 E-value=8.5e-11 Score=85.05 Aligned_cols=101 Identities=15% Similarity=0.140 Sum_probs=65.6
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCC--CCCCC-CCccEE
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDA--FPIPN-PDWDLI 82 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~fD~i 82 (175)
..++.+|||+|||+|.++..+++. +.+|+++|+|+.++ +.++++... . ..+.+..++. .++.+ ..| .|
T Consensus 28 ~~~~~~VLDiG~G~G~lt~~l~~~-~~~v~~vD~~~~~~-~~a~~~~~~--~----~~v~~~~~D~~~~~~~~~~~~-~v 98 (244)
T 1qam_A 28 LNEHDNIFEIGSGKGHFTLELVQR-CNFVTAIEIDHKLC-KTTENKLVD--H----DNFQVLNKDILQFKFPKNQSY-KI 98 (244)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHH-HHHHHHTTT--C----CSEEEECCCGGGCCCCSSCCC-EE
T ss_pred CCCCCEEEEEeCCchHHHHHHHHc-CCeEEEEECCHHHH-HHHHHhhcc--C----CCeEEEEChHHhCCcccCCCe-EE
Confidence 446789999999999999999988 68999999999998 666665542 1 1233333332 23332 345 45
Q ss_pred EeCCcccCcccchHHHHHH--------------HHHHhhcCCCCceeec
Q 030558 83 LASDILLYVKQYSNLIKSL--------------SVLLKSYKPKDSQVGH 117 (175)
Q Consensus 83 ~~~~~l~~~~~~~~~~~~l--------------~~l~~~l~pgG~~~~~ 117 (175)
+++-. |++. .+-+..++ +.+.|+++|+|.+.+.
T Consensus 99 v~nlP-y~~~-~~~l~~~l~~~~~~~~~lm~q~e~a~rll~~~G~l~v~ 145 (244)
T 1qam_A 99 FGNIP-YNIS-TDIIRKIVFDSIADEIYLIVEYGFAKRLLNTKRSLALF 145 (244)
T ss_dssp EEECC-GGGH-HHHHHHHHHSCCCSEEEEEEEHHHHHHHTCTTSHHHHH
T ss_pred EEeCC-cccC-HHHHHHHHhcCCCCeEEEEEEHHHHHHHhcCCcchhHH
Confidence 55544 3432 22222333 3478899999977766
No 253
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.19 E-value=2.8e-10 Score=87.37 Aligned_cols=112 Identities=13% Similarity=0.143 Sum_probs=79.1
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCC---------------------------------------CcEEEEeCChHHHHH
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMN---------------------------------------LDITTSDYNDQEIED 46 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~---------------------------------------~~v~~~D~s~~~l~~ 46 (175)
+.++..+||.+||+|.+.+.++.... .+|+|+|+++.++ +
T Consensus 192 ~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al-~ 270 (384)
T 3ldg_A 192 WFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMV-E 270 (384)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHH-H
T ss_pred CCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHH-H
Confidence 44678999999999999998876522 3499999999998 8
Q ss_pred HHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCCcccC-cccchHHHHHHHHHHhhcCC--CCceeecccc
Q 030558 47 NIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASDILLY-VKQYSNLIKSLSVLLKSYKP--KDSQVGHLTK 120 (175)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~~l~~-~~~~~~~~~~l~~l~~~l~p--gG~~~~~~~~ 120 (175)
.++.|....+....+..+..+..+. +. ..+||+|+++..+.. ..+.+++..+.+++.+.+|+ |+.+++.+..
T Consensus 271 ~Ar~Na~~~gl~~~I~~~~~D~~~l-~~-~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~ 345 (384)
T 3ldg_A 271 IARKNAREVGLEDVVKLKQMRLQDF-KT-NKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILTND 345 (384)
T ss_dssp HHHHHHHHTTCTTTEEEEECCGGGC-CC-CCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEESC
T ss_pred HHHHHHHHcCCCCceEEEECChHHC-Cc-cCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEECC
Confidence 8888998888754444444443322 22 348999999876421 12234566777777777776 8888887553
No 254
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.19 E-value=4e-11 Score=93.91 Aligned_cols=108 Identities=17% Similarity=0.113 Sum_probs=75.7
Q ss_pred CCCcEEEeCCCccHHHHHHHHhC--------------CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCC
Q 030558 8 ERRRCIELGSGTGALAIFLRKAM--------------NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFP 73 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~--------------~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (175)
++.+|||.|||+|.+...+++.. ..+++|+|+++.++ +.++.+....+.... ...+..++.+.
T Consensus 171 ~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~-~lA~~nl~l~g~~~~--~~~i~~gD~l~ 247 (445)
T 2okc_A 171 MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVV-TLASMNLYLHGIGTD--RSPIVCEDSLE 247 (445)
T ss_dssp TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHH-HHHHHHHHHTTCCSS--CCSEEECCTTT
T ss_pred CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHH-HHHHHHHHHhCCCcC--CCCEeeCCCCC
Confidence 56799999999999998887642 46799999999997 777777776665210 12233344443
Q ss_pred C-CCCCccEEEeCCcccCcccc--------------hHHHHHHHHHHhhcCCCCceeecc
Q 030558 74 I-PNPDWDLILASDILLYVKQY--------------SNLIKSLSVLLKSYKPKDSQVGHL 118 (175)
Q Consensus 74 ~-~~~~fD~i~~~~~l~~~~~~--------------~~~~~~l~~l~~~l~pgG~~~~~~ 118 (175)
. ...+||+|+++..+...... .....+++++.+.|+|||++++++
T Consensus 248 ~~~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~ 307 (445)
T 2okc_A 248 KEPSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVL 307 (445)
T ss_dssp SCCSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEE
Confidence 2 23489999998775322111 012478999999999999988774
No 255
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.18 E-value=8.3e-11 Score=86.93 Aligned_cols=94 Identities=16% Similarity=0.146 Sum_probs=61.1
Q ss_pred cccCCCcEEEeCC------CccHHHHHHHHhC--CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcce-eeccCCCCCCCC
Q 030558 5 EWIERRRCIELGS------GTGALAIFLRKAM--NLDITTSDYNDQEIEDNIAYNSTTNGITPALPH-IKHSWGDAFPIP 75 (175)
Q Consensus 5 ~~~~~~~vLDlGc------G~G~~~~~l~~~~--~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 75 (175)
...++.+|||||| |+|. ..+++.. +.+|+|+|+++. + ..+.. +..++.+ .++
T Consensus 60 ~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-v--------------~~v~~~i~gD~~~-~~~- 120 (290)
T 2xyq_A 60 AVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-V--------------SDADSTLIGDCAT-VHT- 120 (290)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-B--------------CSSSEEEESCGGG-CCC-
T ss_pred CCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-C--------------CCCEEEEECcccc-CCc-
Confidence 3456889999999 5577 4445544 368999999996 1 12234 4444322 222
Q ss_pred CCCccEEEeCCccc--------CcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 76 NPDWDLILASDILL--------YVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 76 ~~~fD~i~~~~~l~--------~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
.++||+|+++.... +.........+++++.++|||||+|++.
T Consensus 121 ~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~ 170 (290)
T 2xyq_A 121 ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVK 170 (290)
T ss_dssp SSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 36899999863320 0011223458999999999999998884
No 256
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.15 E-value=1.3e-11 Score=89.96 Aligned_cols=79 Identities=13% Similarity=0.169 Sum_probs=55.6
Q ss_pred CCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCCh-------HHHHHHHHHHHhhCCCCCCcceeeccCCCCCC-CCC--C
Q 030558 8 ERRRCIELGSGTGALAIFLRKAMNLDITTSDYND-------QEIEDNIAYNSTTNGITPALPHIKHSWGDAFP-IPN--P 77 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~-------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~ 77 (175)
++.+|||+|||+|..++.+++. +.+|+++|+|+ .++ +.++++...++...++..+..+..+.++ +.+ +
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~-g~~V~~vD~s~~~~~ll~~~l-~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~ 160 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASL-GLTVTAFEQHPAVACLLSDGI-RRALLNPETQDTAARINLHFGNAAEQMPALVKTQG 160 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHT-TCCEEEEECCHHHHHHHHHHH-HHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHC
T ss_pred CcCeEEEeeCccCHHHHHHHHh-CCEEEEEECChhhhHHHHHHH-HHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCC
Confidence 5689999999999999999987 78999999999 887 6666666554442223333333222222 223 6
Q ss_pred CccEEEeCCcc
Q 030558 78 DWDLILASDIL 88 (175)
Q Consensus 78 ~fD~i~~~~~l 88 (175)
+||+|++..++
T Consensus 161 ~fD~V~~dP~~ 171 (258)
T 2r6z_A 161 KPDIVYLDPMY 171 (258)
T ss_dssp CCSEEEECCCC
T ss_pred CccEEEECCCC
Confidence 89999997665
No 257
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.15 E-value=2.4e-11 Score=92.97 Aligned_cols=97 Identities=13% Similarity=0.096 Sum_probs=66.6
Q ss_pred CCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCC-CC------------
Q 030558 9 RRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFP-IP------------ 75 (175)
Q Consensus 9 ~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------------ 75 (175)
+++|||+|||+|.+++.+++. +.+|+++|+|+.++ +.+++|...++. .++..+..+..+..+ ..
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~-~~~V~gvd~~~~ai-~~a~~n~~~ng~-~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~ 290 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARN-FDRVLATEIAKPSV-AAAQYNIAANHI-DNVQIIRMAAEEFTQAMNGVREFNRLQGID 290 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGG-SSEEEEECCCHHHH-HHHHHHHHHTTC-CSEEEECCCSHHHHHHHSSCCCCTTGGGSC
T ss_pred CCEEEEccCCCCHHHHHHHhc-CCEEEEEECCHHHH-HHHHHHHHHcCC-CceEEEECCHHHHHHHHhhccccccccccc
Confidence 678999999999999999875 67899999999998 888889888877 233333322211111 11
Q ss_pred --CCCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 76 --NPDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 76 --~~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
+.+||+|++...- . .+..++.+.++++|++++.
T Consensus 291 ~~~~~fD~Vv~dPPr-~--------g~~~~~~~~l~~~g~ivyv 325 (369)
T 3bt7_A 291 LKSYQCETIFVDPPR-S--------GLDSETEKMVQAYPRILYI 325 (369)
T ss_dssp GGGCCEEEEEECCCT-T--------CCCHHHHHHHTTSSEEEEE
T ss_pred cccCCCCEEEECcCc-c--------ccHHHHHHHHhCCCEEEEE
Confidence 1379999875432 1 2234566666788876664
No 258
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.13 E-value=3.7e-11 Score=93.19 Aligned_cols=98 Identities=19% Similarity=0.188 Sum_probs=67.2
Q ss_pred CCCcEEEeCCCccHHHHHHHHhC--CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCC-CCCCccEEEe
Q 030558 8 ERRRCIELGSGTGALAIFLRKAM--NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPI-PNPDWDLILA 84 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~--~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~fD~i~~ 84 (175)
++.+|||+|||+|.++..+++.. +.+++|+|+++.++ +.+ ..+..+ .++.... ..++||+|++
T Consensus 39 ~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~-~~a----------~~~~~~---~~D~~~~~~~~~fD~Ii~ 104 (421)
T 2ih2_A 39 RGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKAL-DLP----------PWAEGI---LADFLLWEPGEAFDLILG 104 (421)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTC-CCC----------TTEEEE---ESCGGGCCCSSCEEEEEE
T ss_pred CCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHH-HhC----------CCCcEE---eCChhhcCccCCCCEEEE
Confidence 46799999999999999998863 57899999999886 322 112222 2232222 2468999999
Q ss_pred CCcccCccc-------c-hH------------------HHHHHHHHHhhcCCCCceeeccc
Q 030558 85 SDILLYVKQ-------Y-SN------------------LIKSLSVLLKSYKPKDSQVGHLT 119 (175)
Q Consensus 85 ~~~l~~~~~-------~-~~------------------~~~~l~~l~~~l~pgG~~~~~~~ 119 (175)
+..+..... . +. ...+++.+.+.|+|||++++.++
T Consensus 105 NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p 165 (421)
T 2ih2_A 105 NPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVP 165 (421)
T ss_dssp CCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 866532221 0 11 12568899999999999888643
No 259
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.12 E-value=7.2e-12 Score=90.72 Aligned_cols=103 Identities=15% Similarity=0.156 Sum_probs=68.2
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCC--CC-CCCccEE
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFP--IP-NPDWDLI 82 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~fD~i 82 (175)
..++.+|||+|||+|.++..+++. +.+|+|+|+|+.++ +.++++... ...+.+..+|... +. +++| .|
T Consensus 27 ~~~~~~VLDiG~G~G~~~~~l~~~-~~~v~~id~~~~~~-~~a~~~~~~------~~~v~~~~~D~~~~~~~~~~~f-~v 97 (245)
T 1yub_A 27 LKETDTVYEIGTGKGHLTTKLAKI-SKQVTSIELDSHLF-NLSSEKLKL------NTRVTLIHQDILQFQFPNKQRY-KI 97 (245)
T ss_dssp CCSSEEEEECSCCCSSCSHHHHHH-SSEEEESSSSCSSS-SSSSCTTTT------CSEEEECCSCCTTTTCCCSSEE-EE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHh-CCeEEEEECCHHHH-HHHHHHhcc------CCceEEEECChhhcCcccCCCc-EE
Confidence 346789999999999999999888 68999999999987 554443321 1234444444332 33 2578 67
Q ss_pred EeCCcccCcccchHHHHH----------H----HHHHhhcCCCCceeeccc
Q 030558 83 LASDILLYVKQYSNLIKS----------L----SVLLKSYKPKDSQVGHLT 119 (175)
Q Consensus 83 ~~~~~l~~~~~~~~~~~~----------l----~~l~~~l~pgG~~~~~~~ 119 (175)
+++-.. +... +.+..+ + +.+.++|+|||.+++...
T Consensus 98 v~n~Py-~~~~-~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~~ 146 (245)
T 1yub_A 98 VGNIPY-HLST-QIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLLH 146 (245)
T ss_dssp EEECCS-SSCH-HHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHTT
T ss_pred EEeCCc-cccH-HHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhhe
Confidence 766443 3321 222222 2 668999999999888743
No 260
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.10 E-value=6.1e-10 Score=82.55 Aligned_cols=75 Identities=19% Similarity=0.248 Sum_probs=55.8
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCC--CCCCCCccEEE
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAF--PIPNPDWDLIL 83 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~fD~i~ 83 (175)
..++.+|||||||+|.++..+++. +.+|+++|+++.++ +.++++... . ..+.+..+|.. ++++.+||.|+
T Consensus 48 ~~~~~~VLEIG~G~G~lT~~La~~-~~~V~aVEid~~li-~~a~~~~~~--~----~~v~vi~gD~l~~~~~~~~fD~Iv 119 (295)
T 3gru_A 48 LTKDDVVLEIGLGKGILTEELAKN-AKKVYVIEIDKSLE-PYANKLKEL--Y----NNIEIIWGDALKVDLNKLDFNKVV 119 (295)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCGGGH-HHHHHHHHH--C----SSEEEEESCTTTSCGGGSCCSEEE
T ss_pred CCCcCEEEEECCCchHHHHHHHhc-CCEEEEEECCHHHH-HHHHHHhcc--C----CCeEEEECchhhCCcccCCccEEE
Confidence 446789999999999999999988 78999999999998 676666542 1 22334444433 34445799999
Q ss_pred eCCcc
Q 030558 84 ASDIL 88 (175)
Q Consensus 84 ~~~~l 88 (175)
++-.+
T Consensus 120 ~NlPy 124 (295)
T 3gru_A 120 ANLPY 124 (295)
T ss_dssp EECCG
T ss_pred EeCcc
Confidence 88664
No 261
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.05 E-value=9.5e-10 Score=82.12 Aligned_cols=110 Identities=12% Similarity=0.032 Sum_probs=70.5
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhC--CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCC--CCCccE
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAM--NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIP--NPDWDL 81 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~fD~ 81 (175)
..+|.+|||+|||+|..+..+++.. ..+|+++|+++.++ +.++++....+. .++..+..+..+..+.. .++||.
T Consensus 100 ~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l-~~~~~n~~r~g~-~~v~~~~~D~~~~~~~~~~~~~fD~ 177 (309)
T 2b9e_A 100 PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRL-ASMATLLARAGV-SCCELAEEDFLAVSPSDPRYHEVHY 177 (309)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHH-HHHHHHHHHTTC-CSEEEEECCGGGSCTTCGGGTTEEE
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHH-HHHHHHHHHcCC-CeEEEEeCChHhcCccccccCCCCE
Confidence 3468899999999999999998864 36899999999998 788888887776 22333333322221111 147999
Q ss_pred EEeCC------cccCccc-----------ch----HHHHHHHHHHhhcCCCCceeecc
Q 030558 82 ILASD------ILLYVKQ-----------YS----NLIKSLSVLLKSYKPKDSQVGHL 118 (175)
Q Consensus 82 i~~~~------~l~~~~~-----------~~----~~~~~l~~l~~~l~pgG~~~~~~ 118 (175)
|++.. ++...++ .. .+.++++.+.+.++ ||++++++
T Consensus 178 Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsT 234 (309)
T 2b9e_A 178 ILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYST 234 (309)
T ss_dssp EEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEE
T ss_pred EEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEEC
Confidence 99732 1211111 11 12356777777776 89888763
No 262
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.02 E-value=8.8e-11 Score=90.52 Aligned_cols=76 Identities=14% Similarity=0.086 Sum_probs=55.5
Q ss_pred CCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhC--CCCCCcceeeccCCCCCCC-CCCCccEEEeC
Q 030558 9 RRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTN--GITPALPHIKHSWGDAFPI-PNPDWDLILAS 85 (175)
Q Consensus 9 ~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~fD~i~~~ 85 (175)
|.+|||+|||+|..++.+++. +.+|+++|+|+.++ +.++.|...+ +. .++..+..+..+.++. .+++||+|++.
T Consensus 94 g~~VLDLgcG~G~~al~LA~~-g~~V~~VD~s~~~l-~~Ar~N~~~~~~gl-~~i~~i~~Da~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSK-ASQGIYIERNDETA-VAARHNIPLLLNEG-KDVNILTGDFKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTT-CSEEEEEESCHHHH-HHHHHHHHHHSCTT-CEEEEEESCGGGSHHHHHHHCCSEEEEC
T ss_pred CCEEEEeCCCchHHHHHHHhc-CCEEEEEECCHHHH-HHHHHhHHHhccCC-CcEEEEECcHHHhhhhccCCCceEEEEC
Confidence 899999999999999999876 78999999999998 8888888765 54 2333333333222121 23589999985
Q ss_pred Cc
Q 030558 86 DI 87 (175)
Q Consensus 86 ~~ 87 (175)
..
T Consensus 171 PP 172 (410)
T 3ll7_A 171 PA 172 (410)
T ss_dssp CE
T ss_pred CC
Confidence 44
No 263
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.00 E-value=3.1e-09 Score=87.40 Aligned_cols=114 Identities=15% Similarity=0.125 Sum_probs=77.2
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhC-------------------------------------------CCcEEEEeCChH
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAM-------------------------------------------NLDITTSDYNDQ 42 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~-------------------------------------------~~~v~~~D~s~~ 42 (175)
+.++.+|||.+||+|.+.+.++... ...|+|+|+++.
T Consensus 188 ~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~ 267 (703)
T 3v97_A 188 WQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDAR 267 (703)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHH
T ss_pred CCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHH
Confidence 3467889999999999998877642 147999999999
Q ss_pred HHHHHHHHHHhhCCCCCCcceeeccCCCCC-CCCCCCccEEEeCCcccC-cc---cchHHHHHHHHHHhhcCCCCceeec
Q 030558 43 EIEDNIAYNSTTNGITPALPHIKHSWGDAF-PIPNPDWDLILASDILLY-VK---QYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 43 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~fD~i~~~~~l~~-~~---~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
++ +.++.|....+....+.....+..+.. +...++||+|+++..+-. .. ....+-+.+.+.++.+.|||++++.
T Consensus 268 av-~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~~~il 346 (703)
T 3v97_A 268 VI-QRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLF 346 (703)
T ss_dssp HH-HHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred HH-HHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCeEEEE
Confidence 98 888899998887433344433333222 222348999999977421 11 1233444555666666799999988
Q ss_pred ccc
Q 030558 118 LTK 120 (175)
Q Consensus 118 ~~~ 120 (175)
+..
T Consensus 347 t~~ 349 (703)
T 3v97_A 347 SAS 349 (703)
T ss_dssp ESC
T ss_pred eCC
Confidence 443
No 264
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.99 E-value=1.4e-09 Score=79.65 Aligned_cols=76 Identities=18% Similarity=0.189 Sum_probs=53.4
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCC--CCC-CCccEE
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFP--IPN-PDWDLI 82 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~fD~i 82 (175)
..++ +|||||||+|.++..+++. +.+|+++|+++.++ +.++++... . .+.+..+|... +.+ ..+|.|
T Consensus 45 ~~~~-~VLEIG~G~G~lt~~L~~~-~~~V~avEid~~~~-~~l~~~~~~----~---~v~vi~~D~l~~~~~~~~~~~~i 114 (271)
T 3fut_A 45 PFTG-PVFEVGPGLGALTRALLEA-GAEVTAIEKDLRLR-PVLEETLSG----L---PVRLVFQDALLYPWEEVPQGSLL 114 (271)
T ss_dssp CCCS-CEEEECCTTSHHHHHHHHT-TCCEEEEESCGGGH-HHHHHHTTT----S---SEEEEESCGGGSCGGGSCTTEEE
T ss_pred CCCC-eEEEEeCchHHHHHHHHHc-CCEEEEEECCHHHH-HHHHHhcCC----C---CEEEEECChhhCChhhccCccEE
Confidence 3456 9999999999999999887 68999999999998 677666542 1 23333344332 222 268998
Q ss_pred EeCCcccCcc
Q 030558 83 LASDILLYVK 92 (175)
Q Consensus 83 ~~~~~l~~~~ 92 (175)
+++-.+ +..
T Consensus 115 v~NlPy-~is 123 (271)
T 3fut_A 115 VANLPY-HIA 123 (271)
T ss_dssp EEEECS-SCC
T ss_pred EecCcc-ccc
Confidence 887664 443
No 265
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.97 E-value=3e-10 Score=85.96 Aligned_cols=109 Identities=13% Similarity=0.142 Sum_probs=68.9
Q ss_pred CCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCC---CC-CCcceeeccCCCCCCC------CCC
Q 030558 8 ERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNG---IT-PALPHIKHSWGDAFPI------PNP 77 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~------~~~ 77 (175)
++++||+||||+|..+..+++....+|+++|+++.++ +.++++....+ .. .+-+.+.+..+|...+ ..+
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vi-e~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~ 266 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVI-DGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 266 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHH-HHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHH-HHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCC
Confidence 5789999999999999999887667799999999998 77777654211 10 0001344444443321 246
Q ss_pred CccEEEeCCcc-cCcccch--HHHHHHHHH----HhhcCCCCceeec
Q 030558 78 DWDLILASDIL-LYVKQYS--NLIKSLSVL----LKSYKPKDSQVGH 117 (175)
Q Consensus 78 ~fD~i~~~~~l-~~~~~~~--~~~~~l~~l----~~~l~pgG~~~~~ 117 (175)
+||+|++-..- -...... .-..+++.+ .++|+|||.+++.
T Consensus 267 ~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~q 313 (364)
T 2qfm_A 267 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQ 313 (364)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred CceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEE
Confidence 89999985321 0000010 112444444 8999999987775
No 266
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.95 E-value=1.5e-09 Score=86.87 Aligned_cols=110 Identities=9% Similarity=0.041 Sum_probs=75.2
Q ss_pred CCCcEEEeCCCccHHHHHHHHhC-------------------CCcEEEEeCChHHHHHHHHHHHhhCCCCCCc-ceeecc
Q 030558 8 ERRRCIELGSGTGALAIFLRKAM-------------------NLDITTSDYNDQEIEDNIAYNSTTNGITPAL-PHIKHS 67 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~-------------------~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~-~~~~~~ 67 (175)
++.+|||.+||+|.+...+++.. ..+++|+|+++.++ +.++.+....+..... ....+.
T Consensus 169 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~-~lA~~nl~l~gi~~~~~~~~~I~ 247 (541)
T 2ar0_A 169 PREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTR-RLALMNCLLHDIEGNLDHGGAIR 247 (541)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHH-HHHHHHHHTTTCCCBGGGTBSEE
T ss_pred CCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHH-HHHHHHHHHhCCCccccccCCeE
Confidence 56799999999999998876643 23799999999997 7777777766652100 002233
Q ss_pred CCCCCC---CCCCCccEEEeCCcccCccc-----------chHHHHHHHHHHhhcCCCCceeecc
Q 030558 68 WGDAFP---IPNPDWDLILASDILLYVKQ-----------YSNLIKSLSVLLKSYKPKDSQVGHL 118 (175)
Q Consensus 68 ~~~~~~---~~~~~fD~i~~~~~l~~~~~-----------~~~~~~~l~~l~~~l~pgG~~~~~~ 118 (175)
.++.+. ...++||+|+++..+..... ...-..+++++.+.|+|||++++++
T Consensus 248 ~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~ 312 (541)
T 2ar0_A 248 LGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVV 312 (541)
T ss_dssp ESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEe
Confidence 444443 23468999999876522111 1112378999999999999988873
No 267
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.94 E-value=5.9e-09 Score=79.55 Aligned_cols=113 Identities=12% Similarity=0.055 Sum_probs=70.8
Q ss_pred CCCcEEEeCCCccHHHHHHHH--------h--------CCCcEEEEeCChHHHHHHHHHHHhhC-C----------CCCC
Q 030558 8 ERRRCIELGSGTGALAIFLRK--------A--------MNLDITTSDYNDQEIEDNIAYNSTTN-G----------ITPA 60 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~--------~--------~~~~v~~~D~s~~~l~~~~~~~~~~~-~----------~~~~ 60 (175)
++-+|+|+|||+|.+++.+.. . ...+|...|...++.....+ .+... . ....
T Consensus 52 ~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~-~L~~~~~~~~~~~~~~~~~~~ 130 (374)
T 3b5i_A 52 PPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQ-LLPPLVSNTCMEECLAADGNR 130 (374)
T ss_dssp CCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHH-HSCCBCCCC--CCC---CCCB
T ss_pred CceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHh-hhhhhhhhcchhhhccccCCC
Confidence 357899999999999977622 1 12468999998877422222 21110 0 0000
Q ss_pred cceeeccCCC--CCCCCCCCccEEEeCCcccCcccch-----------------------------------HHHHHHHH
Q 030558 61 LPHIKHSWGD--AFPIPNPDWDLILASDILLYVKQYS-----------------------------------NLIKSLSV 103 (175)
Q Consensus 61 ~~~~~~~~~~--~~~~~~~~fD~i~~~~~l~~~~~~~-----------------------------------~~~~~l~~ 103 (175)
...+....+. ...+++++||+|+++.++++....+ ++..+|+.
T Consensus 131 ~~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ 210 (374)
T 3b5i_A 131 SYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRA 210 (374)
T ss_dssp CSEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 0112112222 2236788999999999994433222 56677899
Q ss_pred HHhhcCCCCceeeccccC
Q 030558 104 LLKSYKPKDSQVGHLTKN 121 (175)
Q Consensus 104 l~~~l~pgG~~~~~~~~~ 121 (175)
.++.|+|||+++++....
T Consensus 211 ra~eL~pGG~mvl~~~gr 228 (374)
T 3b5i_A 211 RAAEVKRGGAMFLVCLGR 228 (374)
T ss_dssp HHHHEEEEEEEEEEEEEC
T ss_pred HHHHhCCCCEEEEEEecC
Confidence 999999999999995544
No 268
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.93 E-value=6.9e-09 Score=85.41 Aligned_cols=110 Identities=9% Similarity=0.014 Sum_probs=71.5
Q ss_pred CCCcEEEeCCCccHHHHHHHHhCC----CcEEEEeCChHHHHHHH--HHHHhhCCCCCCcceeeccCCCCC---CCCCCC
Q 030558 8 ERRRCIELGSGTGALAIFLRKAMN----LDITTSDYNDQEIEDNI--AYNSTTNGITPALPHIKHSWGDAF---PIPNPD 78 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~~----~~v~~~D~s~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 78 (175)
++.+|||.|||+|.+...+++..+ .+++|+|+++.++ +.+ +.+...+.....+....+...+.. ....+.
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al-~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~k 399 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFL-ELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFAN 399 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGH-HHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTT
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHH-HHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCC
Confidence 578999999999999999988653 4699999999987 555 444444333111222122222222 123468
Q ss_pred ccEEEeCCcccCcccch--------------------------HHHHHHHHHHhhcCCCCceeecc
Q 030558 79 WDLILASDILLYVKQYS--------------------------NLIKSLSVLLKSYKPKDSQVGHL 118 (175)
Q Consensus 79 fD~i~~~~~l~~~~~~~--------------------------~~~~~l~~l~~~l~pgG~~~~~~ 118 (175)
||+|+++..+......+ ....+++.+.+.|+|||++++.+
T Consensus 400 FDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIl 465 (878)
T 3s1s_A 400 VSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIM 465 (878)
T ss_dssp EEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEE
Confidence 99999988752111000 12346788999999999998883
No 269
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.93 E-value=1.9e-09 Score=78.40 Aligned_cols=47 Identities=15% Similarity=0.221 Sum_probs=40.0
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhh
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTT 54 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~ 54 (175)
..++.+|||||||+|.++..+++. +.+|+++|+++.++ +.++++...
T Consensus 27 ~~~~~~VLEIG~G~G~lt~~La~~-~~~V~avEid~~~~-~~~~~~~~~ 73 (255)
T 3tqs_A 27 PQKTDTLVEIGPGRGALTDYLLTE-CDNLALVEIDRDLV-AFLQKKYNQ 73 (255)
T ss_dssp CCTTCEEEEECCTTTTTHHHHTTT-SSEEEEEECCHHHH-HHHHHHHTT
T ss_pred CCCcCEEEEEcccccHHHHHHHHh-CCEEEEEECCHHHH-HHHHHHHhh
Confidence 446789999999999999999887 68999999999998 677666543
No 270
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.93 E-value=3e-10 Score=82.66 Aligned_cols=80 Identities=10% Similarity=0.091 Sum_probs=50.2
Q ss_pred cCC--CcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhh---CCCCCC-c-ceeeccCCC---CCCCCC
Q 030558 7 IER--RRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTT---NGITPA-L-PHIKHSWGD---AFPIPN 76 (175)
Q Consensus 7 ~~~--~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~---~~~~~~-~-~~~~~~~~~---~~~~~~ 76 (175)
.++ .+|||+|||+|..++.+++. +.+|+++|+++.+. +.++.+... +..... + ..+.+..++ .++...
T Consensus 85 ~~g~~~~VLDl~~G~G~dal~lA~~-g~~V~~vE~~~~~~-~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~ 162 (258)
T 2oyr_A 85 KGDYLPDVVDATAGLGRDAFVLASV-GCRVRMLERNPVVA-ALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDIT 162 (258)
T ss_dssp BTTBCCCEEETTCTTCHHHHHHHHH-TCCEEEEECCHHHH-HHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCS
T ss_pred cCCCCCEEEEcCCcCCHHHHHHHHc-CCEEEEEECCHHHH-HHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCc
Confidence 345 89999999999999999998 67899999999764 333333221 100000 1 123333333 223223
Q ss_pred CCccEEEeCCcc
Q 030558 77 PDWDLILASDIL 88 (175)
Q Consensus 77 ~~fD~i~~~~~l 88 (175)
.+||+|++..++
T Consensus 163 ~~fDvV~lDP~y 174 (258)
T 2oyr_A 163 PRPQVVYLDPMF 174 (258)
T ss_dssp SCCSEEEECCCC
T ss_pred ccCCEEEEcCCC
Confidence 479999998775
No 271
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.88 E-value=5.8e-09 Score=83.43 Aligned_cols=105 Identities=16% Similarity=0.158 Sum_probs=73.3
Q ss_pred CcEEEeCCCccHHHHHHHHhC----------------CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCC
Q 030558 10 RRCIELGSGTGALAIFLRKAM----------------NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFP 73 (175)
Q Consensus 10 ~~vLDlGcG~G~~~~~l~~~~----------------~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (175)
.+|||.+||+|.+.+.+++.. ..+++|+|+++.++ ..++.|....+.... +.+..++.+.
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~-~lA~~Nl~l~gi~~~---i~i~~gDtL~ 321 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTW-KLAAMNMVIRGIDFN---FGKKNADSFL 321 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHH-HHHHHHHHHTTCCCB---CCSSSCCTTT
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHH-HHHHHHHHHhCCCcc---cceeccchhc
Confidence 389999999999987765432 34699999999997 777878877776322 2234444432
Q ss_pred ---CCCCCccEEEeCCcccC--ccc--------------------c----hHHHHHHHHHHhhcCCCCceeecc
Q 030558 74 ---IPNPDWDLILASDILLY--VKQ--------------------Y----SNLIKSLSVLLKSYKPKDSQVGHL 118 (175)
Q Consensus 74 ---~~~~~fD~i~~~~~l~~--~~~--------------------~----~~~~~~l~~l~~~l~pgG~~~~~~ 118 (175)
....+||+|+++..+-. +.. . ..-..+++.+.+.|+|||++++++
T Consensus 322 ~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVl 395 (544)
T 3khk_A 322 DDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLL 395 (544)
T ss_dssp SCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEe
Confidence 34568999999877532 100 0 011268899999999999988874
No 272
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.87 E-value=1.6e-09 Score=80.58 Aligned_cols=77 Identities=13% Similarity=0.047 Sum_probs=54.7
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCC-C---CCCCccE
Q 030558 7 IERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFP-I---PNPDWDL 81 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~fD~ 81 (175)
.++.+|||+|||+|..+..+++.. +.+|+|+|+|+.++ +.++++...++ .++..+..+..+... . ..++||.
T Consensus 25 ~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al-~~A~~~~~~~g--~~v~~v~~d~~~l~~~l~~~g~~~~D~ 101 (301)
T 1m6y_A 25 EDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVL-RIAEEKLKEFS--DRVSLFKVSYREADFLLKTLGIEKVDG 101 (301)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHH-HHHHHHTGGGT--TTEEEEECCGGGHHHHHHHTTCSCEEE
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHH-HHHHHHHHhcC--CcEEEEECCHHHHHHHHHhcCCCCCCE
Confidence 467899999999999999999876 57899999999998 77777766544 234444433322110 0 1157999
Q ss_pred EEeCC
Q 030558 82 ILASD 86 (175)
Q Consensus 82 i~~~~ 86 (175)
|++..
T Consensus 102 Vl~D~ 106 (301)
T 1m6y_A 102 ILMDL 106 (301)
T ss_dssp EEEEC
T ss_pred EEEcC
Confidence 98754
No 273
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.84 E-value=9.1e-09 Score=83.21 Aligned_cols=102 Identities=12% Similarity=0.039 Sum_probs=70.2
Q ss_pred CCCcEEEeCCCccHHH---HHHHHhCCC--cEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEE
Q 030558 8 ERRRCIELGSGTGALA---IFLRKAMNL--DITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLI 82 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~---~~l~~~~~~--~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i 82 (175)
+++.|||+|||+|.++ +.+++..+. +|+|+|.|+.+ ..+.+....++...++..+..+..+. . .++++|+|
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A--~~a~~~v~~N~~~dkVtVI~gd~eev-~-LPEKVDII 432 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNA--VVTLENWQFEEWGSQVTVVSSDMREW-V-APEKADII 432 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHH--HHHHHHHHHHTTGGGEEEEESCTTTC-C-CSSCEEEE
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHH--HHHHHHHHhccCCCeEEEEeCcceec-c-CCcccCEE
Confidence 4467999999999995 444444444 58999999854 45555667777766666665555332 2 23689999
Q ss_pred EeCCcccCcccchHHHHHHHHHHhhcCCCCce
Q 030558 83 LASDILLYVKQYSNLIKSLSVLLKSYKPKDSQ 114 (175)
Q Consensus 83 ~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~ 114 (175)
++-.+=+ ....+.+..++...-|.|||||.+
T Consensus 433 VSEwMG~-fLl~E~mlevL~Ardr~LKPgGim 463 (637)
T 4gqb_A 433 VSELLGS-FADNELSPECLDGAQHFLKDDGVS 463 (637)
T ss_dssp ECCCCBT-TBGGGCHHHHHHHHGGGEEEEEEE
T ss_pred EEEcCcc-cccccCCHHHHHHHHHhcCCCcEE
Confidence 9965542 333455667888888999999854
No 274
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.80 E-value=2.7e-08 Score=79.52 Aligned_cols=109 Identities=12% Similarity=0.023 Sum_probs=75.7
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhC----CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCC-----CCCC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAM----NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFP-----IPNP 77 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~----~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 77 (175)
.++.+|+|.+||+|.+...+++.. ..+++|+|+++.++ ..++.|....+.. .....+..++.+. ....
T Consensus 220 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~-~lA~~Nl~l~gi~--~~~~~I~~gDtL~~d~p~~~~~ 296 (542)
T 3lkd_A 220 KQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTY-NLARMNMILHGVP--IENQFLHNADTLDEDWPTQEPT 296 (542)
T ss_dssp CTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHH-HHHHHHHHHTTCC--GGGEEEEESCTTTSCSCCSSCC
T ss_pred CCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHH-HHHHHHHHHcCCC--cCccceEecceecccccccccc
Confidence 357899999999999998887764 45799999999987 7777777776662 1223333444332 2356
Q ss_pred CccEEEeCCcccCccc----------------c---h-HHHHHHHHHHhhcC-CCCceeecc
Q 030558 78 DWDLILASDILLYVKQ----------------Y---S-NLIKSLSVLLKSYK-PKDSQVGHL 118 (175)
Q Consensus 78 ~fD~i~~~~~l~~~~~----------------~---~-~~~~~l~~l~~~l~-pgG~~~~~~ 118 (175)
.||+|+++..+..... . . .-..+++.+.+.|+ |||++.+++
T Consensus 297 ~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~Vl 358 (542)
T 3lkd_A 297 NFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVL 358 (542)
T ss_dssp CBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEE
T ss_pred cccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEe
Confidence 8999999866421000 0 0 01248999999999 999988873
No 275
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.78 E-value=9.5e-09 Score=74.75 Aligned_cols=128 Identities=11% Similarity=0.074 Sum_probs=76.3
Q ss_pred CCCcEEEeCCCccHHHHHHHHhC-------------CCcEEEEeCCh---HHHHH----------HHHHHHhhCC-----
Q 030558 8 ERRRCIELGSGTGALAIFLRKAM-------------NLDITTSDYND---QEIED----------NIAYNSTTNG----- 56 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~-------------~~~v~~~D~s~---~~l~~----------~~~~~~~~~~----- 56 (175)
++.+|||+|+|+|..++.+++.. ..+|+++|..| +++.+ .++.......
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 34689999999999998865532 14799999877 44322 2333333210
Q ss_pred -----CCCCcceeeccCCCC---CCCCC----CCccEEEeCCcccCcccchH--HHHHHHHHHhhcCCCCceeeccccCC
Q 030558 57 -----ITPALPHIKHSWGDA---FPIPN----PDWDLILASDILLYVKQYSN--LIKSLSVLLKSYKPKDSQVGHLTKNE 122 (175)
Q Consensus 57 -----~~~~~~~~~~~~~~~---~~~~~----~~fD~i~~~~~l~~~~~~~~--~~~~l~~l~~~l~pgG~~~~~~~~~~ 122 (175)
.......+.+..+|. ++..+ ..||+|+.- .+ .....++ -..+++.+.++|+|||+++.. ..
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD-~f-sp~~~p~lw~~~~l~~l~~~L~pGG~l~ty--sa- 214 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLD-GF-APAKNPDMWTQNLFNAMARLARPGGTLATF--TS- 214 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEEC-SS-CTTTCGGGCCHHHHHHHHHHEEEEEEEEES--CC-
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEEC-CC-CcccChhhcCHHHHHHHHHHcCCCcEEEEE--eC-
Confidence 000112233333442 22222 279999983 22 1111222 137999999999999976641 10
Q ss_pred CCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCeeEEe
Q 030558 123 QGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVKHL 165 (175)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 165 (175)
...+.+.+.++||+++.+
T Consensus 215 -------------------------a~~vrr~L~~aGF~v~~~ 232 (257)
T 2qy6_A 215 -------------------------AGFVRRGLQEAGFTMQKR 232 (257)
T ss_dssp -------------------------BHHHHHHHHHHTEEEEEE
T ss_pred -------------------------CHHHHHHHHHCCCEEEeC
Confidence 156778899999998875
No 276
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.78 E-value=1.6e-08 Score=73.44 Aligned_cols=108 Identities=15% Similarity=0.066 Sum_probs=64.6
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccC-CCCCCCCCCCccEEE
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSW-GDAFPIPNPDWDLIL 83 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~fD~i~ 83 (175)
..++.+|||||||+|.++.++++.. ...|+++|++..+..+. ..........+.+.- .+...+..+.||+|+
T Consensus 72 l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~p------i~~~~~g~~ii~~~~~~dv~~l~~~~~DlVl 145 (277)
T 3evf_A 72 VKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKP------MNVQSLGWNIITFKDKTDIHRLEPVKCDTLL 145 (277)
T ss_dssp SCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCC------CCCCBTTGGGEEEECSCCTTTSCCCCCSEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccc------cccCcCCCCeEEEeccceehhcCCCCccEEE
Confidence 3457789999999999999987753 34688898875431000 000000001111111 133455667899999
Q ss_pred eCCcccC----cccchHHHHHHHHHHhhcCCC-Cceeecccc
Q 030558 84 ASDILLY----VKQYSNLIKSLSVLLKSYKPK-DSQVGHLTK 120 (175)
Q Consensus 84 ~~~~l~~----~~~~~~~~~~l~~l~~~l~pg-G~~~~~~~~ 120 (175)
+.-+. + +.+......+++.+.++|+|| |.|++-+..
T Consensus 146 sD~ap-nsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 146 CDIGE-SSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp ECCCC-CCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred ecCcc-CcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 96544 3 112222224578889999999 988887544
No 277
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.77 E-value=1.1e-08 Score=74.21 Aligned_cols=45 Identities=20% Similarity=0.282 Sum_probs=37.9
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHH
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYN 51 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~ 51 (175)
..++.+|||+|||+|.++..+++..+.+|+++|+++.++ +.++.+
T Consensus 29 ~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~-~~~~~~ 73 (249)
T 3ftd_A 29 IEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMV-ENLKSI 73 (249)
T ss_dssp CCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHH-HHHTTS
T ss_pred CCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHH-HHHHhc
Confidence 346789999999999999999887447899999999998 665544
No 278
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.76 E-value=1.1e-07 Score=66.57 Aligned_cols=99 Identities=12% Similarity=0.069 Sum_probs=66.8
Q ss_pred CCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCC--CCCcceeeccCCCC--------------
Q 030558 8 ERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGI--TPALPHIKHSWGDA-------------- 71 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~-------------- 71 (175)
+.++|||+||| ..++.+|+..+.+|+.+|.+++.. +.++.+....+. ..++..+..+.++.
T Consensus 30 ~a~~VLEiGtG--ySTl~lA~~~~g~VvtvE~d~~~~-~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~ 106 (202)
T 3cvo_A 30 EAEVILEYGSG--GSTVVAAELPGKHVTSVESDRAWA-RMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRS 106 (202)
T ss_dssp HCSEEEEESCS--HHHHHHHTSTTCEEEEEESCHHHH-HHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGG
T ss_pred CCCEEEEECch--HHHHHHHHcCCCEEEEEeCCHHHH-HHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhh
Confidence 46889999985 566777764368999999999886 777888888775 33343333322111
Q ss_pred CC--------C-CCCCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 72 FP--------I-PNPDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 72 ~~--------~-~~~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
++ . ..++||+|+.-.-. . ...+..+.+.|+|||++++-
T Consensus 107 l~~~~~~i~~~~~~~~fDlIfIDg~k------~--~~~~~~~l~~l~~GG~Iv~D 153 (202)
T 3cvo_A 107 YPDYPLAVWRTEGFRHPDVVLVDGRF------R--VGCALATAFSITRPVTLLFD 153 (202)
T ss_dssp TTHHHHGGGGCTTCCCCSEEEECSSS------H--HHHHHHHHHHCSSCEEEEET
T ss_pred HHHHhhhhhccccCCCCCEEEEeCCC------c--hhHHHHHHHhcCCCeEEEEe
Confidence 11 1 23689999985432 1 25566677999999988664
No 279
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.72 E-value=1.8e-08 Score=81.74 Aligned_cols=102 Identities=14% Similarity=0.116 Sum_probs=66.2
Q ss_pred CCcEEEeCCCccHHHHH---HHHh-----------CCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCC
Q 030558 9 RRRCIELGSGTGALAIF---LRKA-----------MNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPI 74 (175)
Q Consensus 9 ~~~vLDlGcG~G~~~~~---l~~~-----------~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (175)
++.|||+|||+|.++.. +++. ...+|+|+|.|+..+ ..+++... ++....+..+..+..+. ..
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~-~~l~~~~~-Ng~~d~VtVI~gd~eev-~l 486 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAI-VTLKYMNV-RTWKRRVTIIESDMRSL-PG 486 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHH-HHHHHHHH-HTTTTCSEEEESCGGGH-HH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHH-HHHHHHHh-cCCCCeEEEEeCchhhc-cc
Confidence 45799999999999743 3221 123899999999765 44444333 66655566665444322 12
Q ss_pred -----CCCCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCce
Q 030558 75 -----PNPDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQ 114 (175)
Q Consensus 75 -----~~~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~ 114 (175)
..++.|+|++-.+= +....+-+...+..+.+.|||||.+
T Consensus 487 p~~~~~~ekVDIIVSElmG-sfl~nEL~pe~Ld~v~r~Lkp~Gi~ 530 (745)
T 3ua3_A 487 IAKDRGFEQPDIIVSELLG-SFGDNELSPECLDGVTGFLKPTTIS 530 (745)
T ss_dssp HHHHTTCCCCSEEEECCCB-TTBGGGSHHHHHHTTGGGSCTTCEE
T ss_pred ccccCCCCcccEEEEeccc-cccchhccHHHHHHHHHhCCCCcEE
Confidence 14689999997664 2333444456777777999999943
No 280
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.70 E-value=3.2e-08 Score=65.12 Aligned_cols=82 Identities=16% Similarity=0.168 Sum_probs=56.5
Q ss_pred CCCcEEEeCCCcc-HHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCC---CCccEEE
Q 030558 8 ERRRCIELGSGTG-ALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPN---PDWDLIL 83 (175)
Q Consensus 8 ~~~~vLDlGcG~G-~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~fD~i~ 83 (175)
.+.+|||||||+| ..+..|++..+.+|+++|+++..+ + .+. .|.+.... ..||+|.
T Consensus 35 ~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av-~----------------~v~---dDiF~P~~~~Y~~~DLIY 94 (153)
T 2k4m_A 35 PGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHG-G----------------IVR---DDITSPRMEIYRGAALIY 94 (153)
T ss_dssp SSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSST-T----------------EEC---CCSSSCCHHHHTTEEEEE
T ss_pred CCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCcccc-c----------------eEE---ccCCCCcccccCCcCEEE
Confidence 4679999999999 799999875699999999999776 2 111 12222222 3799997
Q ss_pred eCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 84 ASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 84 ~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
+-.. +++++..+-++.+.+. .-+++.
T Consensus 95 sirP------P~El~~~i~~lA~~v~--adliI~ 120 (153)
T 2k4m_A 95 SIRP------PAEIHSSLMRVADAVG--ARLIIK 120 (153)
T ss_dssp EESC------CTTTHHHHHHHHHHHT--CEEEEE
T ss_pred EcCC------CHHHHHHHHHHHHHcC--CCEEEE
Confidence 7433 3456677777777555 445554
No 281
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.69 E-value=6.7e-08 Score=73.91 Aligned_cols=156 Identities=12% Similarity=0.029 Sum_probs=86.5
Q ss_pred CCcEEEeCCCccHHHHHHHHh-------------C-----CCcEEEEeCChHHH---HHHHH---HH-HhhCCCCCCcce
Q 030558 9 RRRCIELGSGTGALAIFLRKA-------------M-----NLDITTSDYNDQEI---EDNIA---YN-STTNGITPALPH 63 (175)
Q Consensus 9 ~~~vLDlGcG~G~~~~~l~~~-------------~-----~~~v~~~D~s~~~l---~~~~~---~~-~~~~~~~~~~~~ 63 (175)
.-+|+|+||++|..++.+... . ..+|+..|...+.. -..+. .. ....+......+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 467999999999999876665 1 23588999874321 11111 11 111111011123
Q ss_pred eeccCCCC--CCCCCCCccEEEeCCcccCccc-ch------------------------------------HHHHHHHHH
Q 030558 64 IKHSWGDA--FPIPNPDWDLILASDILLYVKQ-YS------------------------------------NLIKSLSVL 104 (175)
Q Consensus 64 ~~~~~~~~--~~~~~~~fD~i~~~~~l~~~~~-~~------------------------------------~~~~~l~~l 104 (175)
+....+.. ..+++++||+|+++.++ ||.+ .+ ++..+|+..
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~aL-HWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~R 211 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCYCL-HWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIH 211 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEESCT-TBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEeccee-eecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333332 24678899999999999 5533 22 112236666
Q ss_pred HhhcCCCCceeeccccCCCC--C-C---CCCC-----------CCCceEeeeeccCCCcchhHHHHHHHHcC-CeeEEec
Q 030558 105 LKSYKPKDSQVGHLTKNEQG--E-G---TEGL-----------PWPAFLMSWRRRIGKEDETIFFTSCENAG-LEVKHLG 166 (175)
Q Consensus 105 ~~~l~pgG~~~~~~~~~~~~--~-~---~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~ 166 (175)
++.|+|||+++++....... . . .+.. ....+.....+++.. +.+++...++++| |++..+.
T Consensus 212 a~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~p-s~~E~~~~le~~g~F~i~~le 290 (384)
T 2efj_A 212 SEELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAP-STEEVKRIVEEEGSFEILYLE 290 (384)
T ss_dssp HHHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCC-CHHHHHHHHHHHCSEEEEEEE
T ss_pred HHHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCcccCC-CHHHHHHHHHHcCCceEEEEE
Confidence 89999999999986554332 1 0 0000 000000001123333 4588999999874 7877764
No 282
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.62 E-value=3.9e-08 Score=72.37 Aligned_cols=44 Identities=18% Similarity=0.212 Sum_probs=37.3
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCCCc----EEEEeCChHHHHHHHHHH
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMNLD----ITTSDYNDQEIEDNIAYN 51 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~----v~~~D~s~~~l~~~~~~~ 51 (175)
..++.+|||||||+|.++..+++. +.+ |+++|+++.++ +.++++
T Consensus 40 ~~~~~~VLEIG~G~G~lt~~La~~-~~~~~~~V~avDid~~~l-~~a~~~ 87 (279)
T 3uzu_A 40 PERGERMVEIGPGLGALTGPVIAR-LATPGSPLHAVELDRDLI-GRLEQR 87 (279)
T ss_dssp CCTTCEEEEECCTTSTTHHHHHHH-HCBTTBCEEEEECCHHHH-HHHHHH
T ss_pred CCCcCEEEEEccccHHHHHHHHHh-CCCcCCeEEEEECCHHHH-HHHHHh
Confidence 346789999999999999999887 445 99999999998 666655
No 283
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.54 E-value=6.1e-08 Score=70.48 Aligned_cols=108 Identities=12% Similarity=0.046 Sum_probs=64.2
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccC-CCCCCCCCCCccEEE
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSW-GDAFPIPNPDWDLIL 83 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~fD~i~ 83 (175)
+.++.+|||||||+|.++.++++.. ...|+++|++..+.+... ..... ....+.+.- .+...+..+.+|+|+
T Consensus 88 Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi----~~~~~--g~~ii~~~~~~dv~~l~~~~~DvVL 161 (282)
T 3gcz_A 88 VKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPI----MRTTL--GWNLIRFKDKTDVFNMEVIPGDTLL 161 (282)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCC----CCCBT--TGGGEEEECSCCGGGSCCCCCSEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccc----ccccC--CCceEEeeCCcchhhcCCCCcCEEE
Confidence 3467799999999999999988644 346899999865421110 00000 011111111 122345567899999
Q ss_pred eCCcccCc----ccchHHHHHHHHHHhhcCCC--Cceeecccc
Q 030558 84 ASDILLYV----KQYSNLIKSLSVLLKSYKPK--DSQVGHLTK 120 (175)
Q Consensus 84 ~~~~l~~~----~~~~~~~~~l~~l~~~l~pg--G~~~~~~~~ 120 (175)
+--+. +. .+......+++-+.++|+|| |.|++-+..
T Consensus 162 SDmAp-nsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 162 CDIGE-SSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp ECCCC-CCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred ecCcc-CCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 96554 31 11112224577778899999 988886444
No 284
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.54 E-value=4.1e-07 Score=67.10 Aligned_cols=107 Identities=13% Similarity=0.082 Sum_probs=69.8
Q ss_pred CCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhh-CCCCCCcceeeccCCCCC---CCCCCCccEE
Q 030558 8 ERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTT-NGITPALPHIKHSWGDAF---PIPNPDWDLI 82 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~fD~i 82 (175)
..++||=||.|.|.....+++.. ..+|+.+|+++.++ +.+++.... +.-...-+.+.+..+|.. ....++||+|
T Consensus 83 ~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv-~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVV-SFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp CCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHH-HHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHH-HHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 46899999999999999998865 46799999999998 666555422 111011123333344433 3445689999
Q ss_pred EeCCcccCcccch---HHHHHHHHHHhhcCCCCceeec
Q 030558 83 LASDILLYVKQYS---NLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 83 ~~~~~l~~~~~~~---~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
+.-.. .....+ --...++.+.+.|+|||.++..
T Consensus 162 i~D~~--dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q 197 (294)
T 3o4f_A 162 ISDCT--DPIGPGESLFTSAFYEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp EESCC--CCCCTTCCSSCCHHHHHHHHTEEEEEEEEEE
T ss_pred EEeCC--CcCCCchhhcCHHHHHHHHHHhCCCCEEEEe
Confidence 97311 000000 0127889999999999988875
No 285
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.49 E-value=1.5e-07 Score=71.43 Aligned_cols=111 Identities=16% Similarity=0.115 Sum_probs=71.0
Q ss_pred CCcEEEeCCCccHHHHHHHHh---------------C--CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCC
Q 030558 9 RRRCIELGSGTGALAIFLRKA---------------M--NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDA 71 (175)
Q Consensus 9 ~~~vLDlGcG~G~~~~~l~~~---------------~--~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (175)
.-+|+|+||++|..++.+.+. . ..+|+..|...++. ..+-+.+...........+....+..
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDF-ntlF~~L~~~~~~~~~~f~~gvpgSF 130 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDF-NAIFRSLPIENDVDGVCFINGVPGSF 130 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCH-HHHHTTTTTSCSCTTCEEEEEEESCS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHH-HHHHHhcchhcccCCCEEEEecchhh
Confidence 467999999999988644332 0 23589999999886 33332322110000112222222332
Q ss_pred --CCCCCCCccEEEeCCcccCcccc-h------------------------------HHHHHHHHHHhhcCCCCceeecc
Q 030558 72 --FPIPNPDWDLILASDILLYVKQY-S------------------------------NLIKSLSVLLKSYKPKDSQVGHL 118 (175)
Q Consensus 72 --~~~~~~~fD~i~~~~~l~~~~~~-~------------------------------~~~~~l~~l~~~l~pgG~~~~~~ 118 (175)
..++++++|+|+++.++ ||.+. + ++..+|+..++.|+|||+++++.
T Consensus 131 y~rlfp~~S~d~v~Ss~aL-HWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~ 209 (359)
T 1m6e_X 131 YGRLFPRNTLHFIHSSYSL-MWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTI 209 (359)
T ss_dssp SSCCSCTTCBSCEEEESCT-TBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEE
T ss_pred hhccCCCCceEEEEehhhh-hhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 34778899999999999 55332 1 34556888999999999999985
Q ss_pred ccC
Q 030558 119 TKN 121 (175)
Q Consensus 119 ~~~ 121 (175)
...
T Consensus 210 ~gr 212 (359)
T 1m6e_X 210 LGR 212 (359)
T ss_dssp EEC
T ss_pred ecC
Confidence 444
No 286
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.46 E-value=1.4e-07 Score=68.45 Aligned_cols=73 Identities=12% Similarity=0.049 Sum_probs=48.0
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCCCc--EEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCC--C-----
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMNLD--ITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIP--N----- 76 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~--v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----- 76 (175)
..++.+|||||||+|.++. +++ +.+ |+++|+++.|+ +.++++... .+.+.+..+|..... +
T Consensus 19 ~~~~~~VLEIG~G~G~lt~-l~~--~~~~~v~avEid~~~~-~~a~~~~~~------~~~v~~i~~D~~~~~~~~~~~~~ 88 (252)
T 1qyr_A 19 PQKGQAMVEIGPGLAALTE-PVG--ERLDQLTVIELDRDLA-ARLQTHPFL------GPKLTIYQQDAMTFNFGELAEKM 88 (252)
T ss_dssp CCTTCCEEEECCTTTTTHH-HHH--TTCSCEEEECCCHHHH-HHHHTCTTT------GGGEEEECSCGGGCCHHHHHHHH
T ss_pred CCCcCEEEEECCCCcHHHH-hhh--CCCCeEEEEECCHHHH-HHHHHHhcc------CCceEEEECchhhCCHHHhhccc
Confidence 4467899999999999999 754 467 99999999998 666654432 123444444433321 1
Q ss_pred CCccEEEeCCcc
Q 030558 77 PDWDLILASDIL 88 (175)
Q Consensus 77 ~~fD~i~~~~~l 88 (175)
+..|.|+++-.+
T Consensus 89 ~~~~~vvsNlPY 100 (252)
T 1qyr_A 89 GQPLRVFGNLPY 100 (252)
T ss_dssp TSCEEEEEECCT
T ss_pred CCceEEEECCCC
Confidence 234677776553
No 287
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.45 E-value=7.1e-07 Score=65.36 Aligned_cols=107 Identities=13% Similarity=0.109 Sum_probs=63.5
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCC-CCCCCCCCCccEEEe
Q 030558 7 IERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWG-DAFPIPNPDWDLILA 84 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~fD~i~~ 84 (175)
.++++||||||++|.++..+++.. ...|.++|+...+.... ..........+.+.-+ +...+..+.+|+|++
T Consensus 80 ~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P------~~~~~~~~~iv~~~~~~di~~l~~~~~DlVls 153 (300)
T 3eld_A 80 RITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKP------IHMQTLGWNIVKFKDKSNVFTMPTEPSDTLLC 153 (300)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCC------CCCCBTTGGGEEEECSCCTTTSCCCCCSEEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccc------ccccccCCceEEeecCceeeecCCCCcCEEee
Confidence 468899999999999999998753 34689999976431000 0000000011112211 233445678999999
Q ss_pred CCcccCcc----cchHHHHHHHHHHhhcCCC-Cceeecccc
Q 030558 85 SDILLYVK----QYSNLIKSLSVLLKSYKPK-DSQVGHLTK 120 (175)
Q Consensus 85 ~~~l~~~~----~~~~~~~~l~~l~~~l~pg-G~~~~~~~~ 120 (175)
.-+. +.. +......+++-+.++|+|| |.|++-+..
T Consensus 154 D~AP-nsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 154 DIGE-SSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp CCCC-CCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred cCcC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 5443 311 1111234577778999999 988887544
No 288
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.44 E-value=2.2e-07 Score=70.55 Aligned_cols=119 Identities=11% Similarity=0.028 Sum_probs=76.1
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCC-CcEEEEeCChHHHHHHHHHHHhhCCCCC--CcceeeccCCCCC---CCCCCCc
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMN-LDITTSDYNDQEIEDNIAYNSTTNGITP--ALPHIKHSWGDAF---PIPNPDW 79 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~~~D~s~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~f 79 (175)
..+|.+|||+.+|+|.=+..++.... ..|++.|+++.-+ +.++++....+... ....+.....+.. +...+.|
T Consensus 146 ~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~-~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~f 224 (359)
T 4fzv_A 146 LQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRI-ARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTY 224 (359)
T ss_dssp CCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHH-HHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCE
T ss_pred CCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHH-HHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccC
Confidence 45688999999999999999888642 3699999999876 66666665544321 0112222222222 1245689
Q ss_pred cEEEeCCccc--------------Ccccc-------hHHHHHHHHHHhhcCCCCceeeccccCCCCC
Q 030558 80 DLILASDILL--------------YVKQY-------SNLIKSLSVLLKSYKPKDSQVGHLTKNEQGE 125 (175)
Q Consensus 80 D~i~~~~~l~--------------~~~~~-------~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~ 125 (175)
|.|+.-.... ..... .-+.++|....+.+||||+++.++-.....+
T Consensus 225 D~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~E 291 (359)
T 4fzv_A 225 DRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQ 291 (359)
T ss_dssp EEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTTT
T ss_pred CEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchhh
Confidence 9999622210 00000 1235788899999999999999866654444
No 289
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.22 E-value=3.7e-06 Score=61.79 Aligned_cols=103 Identities=14% Similarity=0.172 Sum_probs=69.3
Q ss_pred CCCcEEEeCCCccHHHHHHHHhC------CCcEEEEeCChH--------------------------HHHHHHHHHHhhC
Q 030558 8 ERRRCIELGSGTGALAIFLRKAM------NLDITTSDYNDQ--------------------------EIEDNIAYNSTTN 55 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~------~~~v~~~D~s~~--------------------------~l~~~~~~~~~~~ 55 (175)
..++|||+|+..|..++.++... +.+|+++|..+. .+ +.++++....
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~-~~ar~n~~~~ 184 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSE-EEVRRNFRNY 184 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCH-HHHHHHHHHT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHH-HHHHHHHHHc
Confidence 35789999999999998876642 567999996421 22 4466777776
Q ss_pred CCC-CCcceeeccCCCCCC-CCCCCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceee
Q 030558 56 GIT-PALPHIKHSWGDAFP-IPNPDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVG 116 (175)
Q Consensus 56 ~~~-~~~~~~~~~~~~~~~-~~~~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~ 116 (175)
+.. .++..+..+..+.++ ...++||+|+.-.-. .+.-...++.+...|+|||.+++
T Consensus 185 gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~-----y~~~~~~Le~~~p~L~pGGiIv~ 242 (282)
T 2wk1_A 185 DLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL-----YESTWDTLTNLYPKVSVGGYVIV 242 (282)
T ss_dssp TCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCS-----HHHHHHHHHHHGGGEEEEEEEEE
T ss_pred CCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc-----cccHHHHHHHHHhhcCCCEEEEE
Confidence 662 444444433333333 335689999874322 12334788999999999997777
No 290
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.21 E-value=3.4e-06 Score=60.59 Aligned_cols=104 Identities=12% Similarity=0.073 Sum_probs=56.7
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCCC-cEEEEeCChHH-HHHHHHHHHhhCCCCCCcceeeccCC-CCCCCCCCCccEE
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMNL-DITTSDYNDQE-IEDNIAYNSTTNGITPALPHIKHSWG-DAFPIPNPDWDLI 82 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~~-~v~~~D~s~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~fD~i 82 (175)
+.++.+|+||||++|.++.++++..+. .|.|.++.... + . ...........+.+..+ |........+|+|
T Consensus 71 ikpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~-~------P~~~~~~Gv~~i~~~~G~Df~~~~~~~~DvV 143 (269)
T 2px2_A 71 VQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHE-E------PMLMQSYGWNIVTMKSGVDVFYKPSEISDTL 143 (269)
T ss_dssp CCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSC-C------CCCCCSTTGGGEEEECSCCGGGSCCCCCSEE
T ss_pred CCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccccc-C------CCcccCCCceEEEeeccCCccCCCCCCCCEE
Confidence 346899999999999999999886222 33444443320 0 0 00000011233443333 4333445589999
Q ss_pred EeCCcccCcc----cchHHHHHHHHHHhhcCCCC-ceeec
Q 030558 83 LASDILLYVK----QYSNLIKSLSVLLKSYKPKD-SQVGH 117 (175)
Q Consensus 83 ~~~~~l~~~~----~~~~~~~~l~~l~~~l~pgG-~~~~~ 117 (175)
+|--.- ... +.+....++.-+.+.|+||| .|++-
T Consensus 144 LSDMAP-nSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvK 182 (269)
T 2px2_A 144 LCDIGE-SSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIK 182 (269)
T ss_dssp EECCCC-CCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred EeCCCC-CCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEE
Confidence 983322 111 11111225666778999999 67664
No 291
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.17 E-value=3e-06 Score=62.79 Aligned_cols=46 Identities=9% Similarity=-0.062 Sum_probs=38.7
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhh
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTT 54 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~ 54 (175)
.+|..|||++||+|..++.+++. +.+++|+|+++.++ +.++++...
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~-g~~~~g~e~~~~~~-~~a~~r~~~ 279 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARW-GRRALGVELVPRYA-QLAKERFAR 279 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT-TCEEEEEESCHHHH-HHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc-CCeEEEEeCCHHHH-HHHHHHHHH
Confidence 36889999999999999998775 88999999999998 666655544
No 292
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.16 E-value=1.9e-05 Score=63.12 Aligned_cols=107 Identities=11% Similarity=0.105 Sum_probs=69.0
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhC--------------CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCC
Q 030558 7 IERRRCIELGSGTGALAIFLRKAM--------------NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAF 72 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~--------------~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (175)
..+.+|+|-.||+|.+...+.+.. ...++|.|+++.+. ..++-|....+.. .+. +.+++.+
T Consensus 216 ~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~-~la~mNl~lhg~~--~~~--I~~~dtL 290 (530)
T 3ufb_A 216 QLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPY-LLVQMNLLLHGLE--YPR--IDPENSL 290 (530)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHH-HHHHHHHHHHTCS--CCE--EECSCTT
T ss_pred CCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHH-HHHHHHHHhcCCc--ccc--ccccccc
Confidence 356799999999999987665432 24699999999886 5666666655551 122 3333433
Q ss_pred CC------CCCCccEEEeCCcccCcc-------------cchHHHHHHHHHHhhcC-------CCCceeecc
Q 030558 73 PI------PNPDWDLILASDILLYVK-------------QYSNLIKSLSVLLKSYK-------PKDSQVGHL 118 (175)
Q Consensus 73 ~~------~~~~fD~i~~~~~l~~~~-------------~~~~~~~~l~~l~~~l~-------pgG~~~~~~ 118 (175)
.. ...+||+|+++..+-... ....-...++.+.+.|| |||+..+++
T Consensus 291 ~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVl 362 (530)
T 3ufb_A 291 RFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVV 362 (530)
T ss_dssp CSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEE
T ss_pred cCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEe
Confidence 21 234799999988762110 01112356777888886 699888873
No 293
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.02 E-value=6e-06 Score=62.84 Aligned_cols=108 Identities=15% Similarity=0.157 Sum_probs=67.7
Q ss_pred CCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhC-C--C-CCCcceeeccCCCCCCC------CCC
Q 030558 8 ERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTN-G--I-TPALPHIKHSWGDAFPI------PNP 77 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~-~--~-~~~~~~~~~~~~~~~~~------~~~ 77 (175)
++++||=||.|.|....++.+....+|+.+|+++.++ +.+++..... . . ..+.+.+....+|...+ ..+
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VV-e~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVI-DGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHH-HHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHH-HHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 4689999999999999999887667799999999998 6666543221 0 0 01112233334443321 235
Q ss_pred CccEEEeCCcc-------cCcccchHHHHHHHHHHhhcCCCCceee
Q 030558 78 DWDLILASDIL-------LYVKQYSNLIKSLSVLLKSYKPKDSQVG 116 (175)
Q Consensus 78 ~fD~i~~~~~l-------~~~~~~~~~~~~l~~l~~~l~pgG~~~~ 116 (175)
+||+|+.-..= .......--..+++.+.+.|+|||.++.
T Consensus 284 ~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~ 329 (381)
T 3c6k_A 284 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFT 329 (381)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred ceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEE
Confidence 79999973110 0000001124678888999999997765
No 294
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.97 E-value=5.4e-06 Score=58.78 Aligned_cols=104 Identities=19% Similarity=0.181 Sum_probs=61.2
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCC-CcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCC-CCCCCCCCCccEEE
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMN-LDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWG-DAFPIPNPDWDLIL 83 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~fD~i~ 83 (175)
+.++.+|+||||++|.++.+++...+ .+|+|+|+.+...+ .....+..+. +.+.+..+ |....+...+|+|+
T Consensus 76 l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe--~P~~~~s~gw----n~v~fk~gvDv~~~~~~~~Dtll 149 (267)
T 3p8z_A 76 VIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHE--EPVPMSTYGW----NIVKLMSGKDVFYLPPEKCDTLL 149 (267)
T ss_dssp SCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSC--CCCCCCCTTT----TSEEEECSCCGGGCCCCCCSEEE
T ss_pred CCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCcc--CcchhhhcCc----CceEEEeccceeecCCccccEEE
Confidence 34678999999999999998877654 45999999774320 0001112222 33444444 32333446799999
Q ss_pred eCCcccCcccch-HH---HHHHHHHHhhcCCCCceeec
Q 030558 84 ASDILLYVKQYS-NL---IKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 84 ~~~~l~~~~~~~-~~---~~~l~~l~~~l~pgG~~~~~ 117 (175)
|--.= ..+... +. .++|+-+.+.|++ |.|++-
T Consensus 150 cDIge-Ss~~~~vE~~RtlrvLela~~wL~~-~~fc~K 185 (267)
T 3p8z_A 150 CDIGE-SSPSPTVEESRTIRVLKMVEPWLKN-NQFCIK 185 (267)
T ss_dssp ECCCC-CCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEE
T ss_pred EecCC-CCCChhhhhhHHHHHHHHHHHhccc-CCEEEE
Confidence 83221 111111 22 2356666788888 667665
No 295
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.95 E-value=6.1e-05 Score=57.15 Aligned_cols=70 Identities=14% Similarity=0.176 Sum_probs=46.9
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCC--CCCCCccEEE
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFP--IPNPDWDLIL 83 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~fD~i~ 83 (175)
..+|.++|||||.+|.++..++++ +..|+|+|+.+ |- ..+.. . +.+.+..++... ...+.||+|+
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r-g~~V~aVD~~~-l~-~~l~~---~-------~~V~~~~~d~~~~~~~~~~~D~vv 275 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR-NMWVYSVDNGP-MA-QSLMD---T-------GQVTWLREDGFKFRPTRSNISWMV 275 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT-TCEEEEECSSC-CC-HHHHT---T-------TCEEEECSCTTTCCCCSSCEEEEE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC-CCEEEEEEhhh-cC-hhhcc---C-------CCeEEEeCccccccCCCCCcCEEE
Confidence 457899999999999999999887 78999999876 21 22111 1 122333333332 3346899999
Q ss_pred eCCcc
Q 030558 84 ASDIL 88 (175)
Q Consensus 84 ~~~~l 88 (175)
|-.+.
T Consensus 276 sDm~~ 280 (375)
T 4auk_A 276 CDMVE 280 (375)
T ss_dssp ECCSS
T ss_pred EcCCC
Confidence 85443
No 296
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.92 E-value=1.7e-05 Score=57.99 Aligned_cols=73 Identities=12% Similarity=0.060 Sum_probs=49.7
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCC---CC-CCCCCccE
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDA---FP-IPNPDWDL 81 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~fD~ 81 (175)
..+++.++|.+||.|..+..+++. +.+|+|+|.++.++ +.++. ... .++..++.+..+. +. ...+++|.
T Consensus 20 ~~~gg~~VD~T~G~GGHS~~il~~-~g~VigiD~Dp~Ai-~~A~~-L~~----~rv~lv~~~f~~l~~~L~~~g~~~vDg 92 (285)
T 1wg8_A 20 VRPGGVYVDATLGGAGHARGILER-GGRVIGLDQDPEAV-ARAKG-LHL----PGLTVVQGNFRHLKRHLAALGVERVDG 92 (285)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHH-HHHHH-TCC----TTEEEEESCGGGHHHHHHHTTCSCEEE
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHC-CCEEEEEeCCHHHH-HHHHh-hcc----CCEEEEECCcchHHHHHHHcCCCCcCE
Confidence 346789999999999999999998 77999999999998 66554 322 2333333222211 11 12247888
Q ss_pred EEeC
Q 030558 82 ILAS 85 (175)
Q Consensus 82 i~~~ 85 (175)
|++.
T Consensus 93 IL~D 96 (285)
T 1wg8_A 93 ILAD 96 (285)
T ss_dssp EEEE
T ss_pred EEeC
Confidence 8864
No 297
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.82 E-value=4.3e-05 Score=55.94 Aligned_cols=105 Identities=14% Similarity=0.142 Sum_probs=59.3
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCCC-cEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCC-CCCCCCCCCccEEE
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMNL-DITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWG-DAFPIPNPDWDLIL 83 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~~-~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~fD~i~ 83 (175)
+.++.+||||||++|.++.+++...+. .|+|+|+.....++ ....+..+. ..+.+.-+ +........+|+|+
T Consensus 92 l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~--P~~~~ql~w----~lV~~~~~~Dv~~l~~~~~D~iv 165 (321)
T 3lkz_A 92 LEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEE--PQLVQSYGW----NIVTMKSGVDVFYRPSECCDTLL 165 (321)
T ss_dssp CCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCC--CCCCCBTTG----GGEEEECSCCTTSSCCCCCSEEE
T ss_pred CCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccC--cchhhhcCC----cceEEEeccCHhhCCCCCCCEEE
Confidence 346779999999999999987776544 59999997752100 000001111 11222222 22223336799999
Q ss_pred eCCcccCcccch-HH---HHHHHHHHhhcCCC-Cceeec
Q 030558 84 ASDILLYVKQYS-NL---IKSLSVLLKSYKPK-DSQVGH 117 (175)
Q Consensus 84 ~~~~l~~~~~~~-~~---~~~l~~l~~~l~pg-G~~~~~ 117 (175)
|--. ...+... +. ..+|+-+.+.|+++ |.|++-
T Consensus 166 cDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~K 203 (321)
T 3lkz_A 166 CDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVK 203 (321)
T ss_dssp ECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred EECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEE
Confidence 7322 1112111 22 23666667889888 777775
No 298
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.81 E-value=4.4e-06 Score=77.07 Aligned_cols=101 Identities=17% Similarity=0.191 Sum_probs=46.3
Q ss_pred CCcEEEeCCCccHHHHHHHHhCC------CcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEE
Q 030558 9 RRRCIELGSGTGALAIFLRKAMN------LDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLI 82 (175)
Q Consensus 9 ~~~vLDlGcG~G~~~~~l~~~~~------~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i 82 (175)
..+|||||.|+|..+..+.+..+ .+++.+|+|+... +.++..... + .+..-.++..+..++...+||+|
T Consensus 1241 ~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~-~~a~~~f~~--~--di~~~~~d~~~~~~~~~~~ydlv 1315 (2512)
T 2vz8_A 1241 KMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQAL-EAAQAKLEQ--L--HVTQGQWDPANPAPGSLGKADLL 1315 (2512)
T ss_dssp EEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSST-TTTTTTHHH--H--TEEEECCCSSCCCC-----CCEE
T ss_pred CceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHH-HHHHHHhhh--c--ccccccccccccccCCCCceeEE
Confidence 46899999999987765544432 2689999998654 333322211 0 01111111111112345679999
Q ss_pred EeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 83 LASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 83 ~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
++++++ ....++..+++++.++|+|||.+++.
T Consensus 1316 ia~~vl---~~t~~~~~~l~~~~~lL~p~G~l~~~ 1347 (2512)
T 2vz8_A 1316 VCNCAL---ATLGDPAVAVGNMAATLKEGGFLLLH 1347 (2512)
T ss_dssp EEECC-----------------------CCEEEEE
T ss_pred EEcccc---cccccHHHHHHHHHHhcCCCcEEEEE
Confidence 999998 34456669999999999999988775
No 299
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.60 E-value=4.3e-05 Score=55.88 Aligned_cols=102 Identities=10% Similarity=-0.043 Sum_probs=65.6
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCC---CCCCCCccEEE
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAF---PIPNPDWDLIL 83 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~fD~i~ 83 (175)
+.+..+||+=+|||.+++.+.+. +.+++.+|.++..+ +.+++|.... .++..+..+....+ ..+...||+|+
T Consensus 90 ~n~~~~LDlfaGSGaLgiEaLS~-~d~~vfvE~~~~a~-~~L~~Nl~~~---~~~~V~~~D~~~~L~~l~~~~~~fdLVf 164 (283)
T 2oo3_A 90 INLNSTLSYYPGSPYFAINQLRS-QDRLYLCELHPTEY-NFLLKLPHFN---KKVYVNHTDGVSKLNALLPPPEKRGLIF 164 (283)
T ss_dssp HSSSSSCCEEECHHHHHHHHSCT-TSEEEEECCSHHHH-HHHTTSCCTT---SCEEEECSCHHHHHHHHCSCTTSCEEEE
T ss_pred hcCCCceeEeCCcHHHHHHHcCC-CCeEEEEeCCHHHH-HHHHHHhCcC---CcEEEEeCcHHHHHHHhcCCCCCccEEE
Confidence 35678999999999999999884 78899999999887 7777776541 22222222211111 12234699999
Q ss_pred eCCcccCcccchHHHHHHHHHHh--hcCCCCceee
Q 030558 84 ASDILLYVKQYSNLIKSLSVLLK--SYKPKDSQVG 116 (175)
Q Consensus 84 ~~~~l~~~~~~~~~~~~l~~l~~--~l~pgG~~~~ 116 (175)
+-..+ .. ..+..++++.+.+ .+.|+|.+++
T Consensus 165 iDPPY-e~--k~~~~~vl~~L~~~~~r~~~Gi~v~ 196 (283)
T 2oo3_A 165 IDPSY-ER--KEEYKEIPYAIKNAYSKFSTGLYCV 196 (283)
T ss_dssp ECCCC-CS--TTHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred ECCCC-CC--CcHHHHHHHHHHHhCccCCCeEEEE
Confidence 97775 31 1233455555554 4568886666
No 300
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.43 E-value=0.0003 Score=52.07 Aligned_cols=62 Identities=16% Similarity=0.092 Sum_probs=42.0
Q ss_pred CCCCccEEEeCCcccCcccchHH--HHHHHHHHhhcCCCCceeeccccCCCCCCCCCCCCCceEeeeeccCCCcchhHHH
Q 030558 75 PNPDWDLILASDILLYVKQYSNL--IKSLSVLLKSYKPKDSQVGHLTKNEQGEGTEGLPWPAFLMSWRRRIGKEDETIFF 152 (175)
Q Consensus 75 ~~~~fD~i~~~~~l~~~~~~~~~--~~~l~~l~~~l~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (175)
....||+|+.- .+ -....++| ..++++++++++|||+++- |.. ...+.
T Consensus 183 ~~~~~Da~flD-gF-sP~kNPeLWs~e~f~~l~~~~~pgg~laT--Yta--------------------------ag~VR 232 (308)
T 3vyw_A 183 ENFKADAVFHD-AF-SPYKNPELWTLDFLSLIKERIDEKGYWVS--YSS--------------------------SLSVR 232 (308)
T ss_dssp CSCCEEEEEEC-CS-CTTTSGGGGSHHHHHHHHTTEEEEEEEEE--SCC--------------------------CHHHH
T ss_pred cccceeEEEeC-CC-CcccCcccCCHHHHHHHHHHhCCCcEEEE--EeC--------------------------cHHHH
Confidence 34479998873 22 11222222 4899999999999995543 221 26677
Q ss_pred HHHHHcCCeeEEec
Q 030558 153 TSCENAGLEVKHLG 166 (175)
Q Consensus 153 ~~~~~~g~~~~~~~ 166 (175)
+.++++||+|+.+.
T Consensus 233 R~L~~aGF~V~k~~ 246 (308)
T 3vyw_A 233 KSLLTLGFKVGSSR 246 (308)
T ss_dssp HHHHHTTCEEEEEE
T ss_pred HHHHHCCCEEEecC
Confidence 88999999999874
No 301
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=97.34 E-value=0.00096 Score=50.77 Aligned_cols=96 Identities=16% Similarity=0.122 Sum_probs=63.2
Q ss_pred cccCCCcEEEeCCCc-cHHHHHHHHhCCC-cEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCC-------CCCCC
Q 030558 5 EWIERRRCIELGSGT-GALAIFLRKAMNL-DITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGD-------AFPIP 75 (175)
Q Consensus 5 ~~~~~~~vLDlGcG~-G~~~~~l~~~~~~-~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 75 (175)
...+|.+||=+|+|. |..+..+++..|. .|+++|.+++.. +.++.. +.. ..+.....+ .....
T Consensus 179 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~a~~l----Ga~---~vi~~~~~~~~~~i~~~~~~~ 250 (370)
T 4ej6_A 179 GIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKR-RLAEEV----GAT---ATVDPSAGDVVEAIAGPVGLV 250 (370)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHH-HHHHHH----TCS---EEECTTSSCHHHHHHSTTSSS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHc----CCC---EEECCCCcCHHHHHHhhhhcc
Confidence 345788999999985 8888999998888 899999999775 444332 110 011111101 00122
Q ss_pred CCCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 76 NPDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 76 ~~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
.+.+|+|+-.-. .+ ..++...++++++|++++.
T Consensus 251 ~gg~Dvvid~~G------~~---~~~~~~~~~l~~~G~vv~~ 283 (370)
T 4ej6_A 251 PGGVDVVIECAG------VA---ETVKQSTRLAKAGGTVVIL 283 (370)
T ss_dssp TTCEEEEEECSC------CH---HHHHHHHHHEEEEEEEEEC
T ss_pred CCCCCEEEECCC------CH---HHHHHHHHHhccCCEEEEE
Confidence 347999987532 12 5778899999999998876
No 302
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=97.24 E-value=0.0047 Score=46.28 Aligned_cols=71 Identities=15% Similarity=0.065 Sum_probs=45.2
Q ss_pred CcEEEeCCCccHHHHHHHHhCC-Cc-E-EEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCC--CCCCCCccEEEe
Q 030558 10 RRCIELGSGTGALAIFLRKAMN-LD-I-TTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAF--PIPNPDWDLILA 84 (175)
Q Consensus 10 ~~vLDlGcG~G~~~~~l~~~~~-~~-v-~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~fD~i~~ 84 (175)
-+++|+-||.|.+++-+.+.+- .+ | .++|+++..+ +..+.|..... +..+..+.. .+....+|++++
T Consensus 11 ~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~-~ty~~N~~~~~-------~~~DI~~~~~~~i~~~~~Dil~g 82 (327)
T 3qv2_A 11 VNVIEFFSGIGGLRSSYERSSININATFIPFDINEIAN-KIYSKNFKEEV-------QVKNLDSISIKQIESLNCNTWFM 82 (327)
T ss_dssp EEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHH-HHHHHHHCCCC-------BCCCTTTCCHHHHHHTCCCEEEE
T ss_pred CEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHH-HHHHHHCCCCc-------ccCChhhcCHHHhccCCCCEEEe
Confidence 4799999999999999977631 34 6 7999999886 66666653321 111111111 011126899998
Q ss_pred CCcc
Q 030558 85 SDIL 88 (175)
Q Consensus 85 ~~~l 88 (175)
....
T Consensus 83 gpPC 86 (327)
T 3qv2_A 83 SPPC 86 (327)
T ss_dssp CCCC
T ss_pred cCCc
Confidence 7665
No 303
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=97.11 E-value=0.0013 Score=50.84 Aligned_cols=47 Identities=6% Similarity=0.051 Sum_probs=39.9
Q ss_pred cCCCcEEEeCCCccHHHHHHH-HhCC--CcEEEEeCChHHHHHHHHHHHhh
Q 030558 7 IERRRCIELGSGTGALAIFLR-KAMN--LDITTSDYNDQEIEDNIAYNSTT 54 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~-~~~~--~~v~~~D~s~~~l~~~~~~~~~~ 54 (175)
.++..++|+||+.|..+..++ +..+ .+|+++|++|... +.+++|...
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~-~~L~~n~~~ 274 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINL-QTLQNVLRR 274 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHH-HHHHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHH-HHHHHHHHh
Confidence 578999999999999999987 4443 5899999999887 778888876
No 304
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.06 E-value=0.0018 Score=48.52 Aligned_cols=47 Identities=15% Similarity=0.185 Sum_probs=37.6
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHh
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNST 53 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~ 53 (175)
.+.+.+++||.||.|.+++.+.+.+...|.++|+++..+ +..+.|..
T Consensus 8 ~~~~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~-~t~~~N~~ 54 (327)
T 2c7p_A 8 QLTGLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQ-EVYEMNFG 54 (327)
T ss_dssp TTTTCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHH-HHHHHHHS
T ss_pred ccCCCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHH-HHHHHHcC
Confidence 345688999999999999999887444589999999887 66666653
No 305
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=97.03 E-value=0.0054 Score=46.22 Aligned_cols=95 Identities=8% Similarity=0.055 Sum_probs=61.6
Q ss_pred ccCCCcEEEeCCCc-cHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCC-----C-CC---
Q 030558 6 WIERRRCIELGSGT-GALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAF-----P-IP--- 75 (175)
Q Consensus 6 ~~~~~~vLDlGcG~-G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~--- 75 (175)
..+|++||=+|+|. |..+..+++..|.+|+++|.+++.+ +.++. .+.. ..+.....+.. . ..
T Consensus 166 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~-~~~~~----lGa~---~~~~~~~~~~~~~~i~~~~~~~~ 237 (352)
T 1e3j_A 166 VQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRL-EVAKN----CGAD---VTLVVDPAKEEESSIIERIRSAI 237 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHH----TTCS---EEEECCTTTSCHHHHHHHHHHHS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHH-HHHHH----hCCC---EEEcCcccccHHHHHHHHhcccc
Confidence 45789999999975 8888889888888899999998775 44332 1220 11111100111 0 00
Q ss_pred CCCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 76 NPDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 76 ~~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
...+|+|+-...- + ..++...++++|+|+++..
T Consensus 238 g~g~D~vid~~g~------~---~~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 238 GDLPNVTIDCSGN------E---KCITIGINITRTGGTLMLV 270 (352)
T ss_dssp SSCCSEEEECSCC------H---HHHHHHHHHSCTTCEEEEC
T ss_pred CCCCCEEEECCCC------H---HHHHHHHHHHhcCCEEEEE
Confidence 2468999875321 1 4678889999999988876
No 306
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=97.02 E-value=0.00011 Score=55.25 Aligned_cols=96 Identities=15% Similarity=0.150 Sum_probs=63.0
Q ss_pred cccCCCcEEEeCCCc-cHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCC---CCCCCCCcc
Q 030558 5 EWIERRRCIELGSGT-GALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDA---FPIPNPDWD 80 (175)
Q Consensus 5 ~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~fD 80 (175)
...+|++||=.|+|. |..+..+++..|.+|+++|.+++.+ +.+++. +.. ..+.....+. .....+.+|
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~-~~~~~l----Ga~---~~i~~~~~~~~~~~~~~~g~~d 234 (340)
T 3s2e_A 163 DTRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKL-NLARRL----GAE---VAVNARDTDPAAWLQKEIGGAH 234 (340)
T ss_dssp TCCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHT----TCS---EEEETTTSCHHHHHHHHHSSEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHH-HHHHHc----CCC---EEEeCCCcCHHHHHHHhCCCCC
Confidence 455789999999985 9999999998899999999999776 444321 220 1111110000 000113688
Q ss_pred EEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 81 LILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 81 ~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
+|+-... .. ..++...++++|+|+++..
T Consensus 235 ~vid~~g------~~---~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 235 GVLVTAV------SP---KAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp EEEESSC------CH---HHHHHHHHHEEEEEEEEEC
T ss_pred EEEEeCC------CH---HHHHHHHHHhccCCEEEEe
Confidence 8876432 12 6788899999999988876
No 307
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=97.01 E-value=0.00048 Score=52.37 Aligned_cols=96 Identities=17% Similarity=0.110 Sum_probs=62.6
Q ss_pred cccCCCcEEEeCCCc-cHHHHHHHHhCCC-cEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCC---CC-CCCCCC
Q 030558 5 EWIERRRCIELGSGT-GALAIFLRKAMNL-DITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGD---AF-PIPNPD 78 (175)
Q Consensus 5 ~~~~~~~vLDlGcG~-G~~~~~l~~~~~~-~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~ 78 (175)
...+|.+||-+|+|. |..+..+++..+. .|+++|.+++.+ +.++.. +.. ..+.....+ .. ....+.
T Consensus 187 ~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~-~~a~~l----Ga~---~vi~~~~~~~~~~~~~~~~gg 258 (371)
T 1f8f_A 187 KVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRL-ELAKQL----GAT---HVINSKTQDPVAAIKEITDGG 258 (371)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHH-HHHHHH----TCS---EEEETTTSCHHHHHHHHTTSC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHH-HHHHHc----CCC---EEecCCccCHHHHHHHhcCCC
Confidence 455789999999986 8888888887787 599999999775 444322 110 011111000 00 111237
Q ss_pred ccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 79 WDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 79 fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
+|+|+-...- + ..++...++++|+|++++.
T Consensus 259 ~D~vid~~g~------~---~~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 259 VNFALESTGS------P---EILKQGVDALGILGKIAVV 288 (371)
T ss_dssp EEEEEECSCC------H---HHHHHHHHTEEEEEEEEEC
T ss_pred CcEEEECCCC------H---HHHHHHHHHHhcCCEEEEe
Confidence 9999865331 2 5678899999999988876
No 308
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=96.97 E-value=0.0039 Score=47.05 Aligned_cols=96 Identities=11% Similarity=0.116 Sum_probs=61.8
Q ss_pred cccCCCcEEEeCCCc-cHHHHHHHHhCCC-cEEEEeCChHHHHHHHHHHHhhCCCCCCcceeecc------CCCCC-CCC
Q 030558 5 EWIERRRCIELGSGT-GALAIFLRKAMNL-DITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHS------WGDAF-PIP 75 (175)
Q Consensus 5 ~~~~~~~vLDlGcG~-G~~~~~l~~~~~~-~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~------~~~~~-~~~ 75 (175)
...+|.+||-+|+|. |..+..+++..|. +|+++|.+++.+ +.++. .+.. ..+... +.+.. ...
T Consensus 168 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~a~~----lGa~---~vi~~~~~~~~~~~~~i~~~~ 239 (356)
T 1pl8_A 168 GVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRL-SKAKE----IGAD---LVLQISKESPQEIARKVEGQL 239 (356)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHH-HHHHH----TTCS---EEEECSSCCHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHH----hCCC---EEEcCcccccchHHHHHHHHh
Confidence 345789999999985 8888999998888 899999998765 44332 1220 111111 00000 000
Q ss_pred CCCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 76 NPDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 76 ~~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
...+|+|+-.-.- + ..++...++++|+|+++..
T Consensus 240 ~~g~D~vid~~g~------~---~~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 240 GCKPEVTIECTGA------E---ASIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp TSCCSEEEECSCC------H---HHHHHHHHHSCTTCEEEEC
T ss_pred CCCCCEEEECCCC------h---HHHHHHHHHhcCCCEEEEE
Confidence 1468999875321 1 4678889999999988876
No 309
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.96 E-value=0.0014 Score=49.60 Aligned_cols=44 Identities=9% Similarity=0.092 Sum_probs=36.4
Q ss_pred CCCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHH
Q 030558 8 ERRRCIELGSGTGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNS 52 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~ 52 (175)
++..|||||.|.|.++..|+... +.+|+++++++..+ ..++...
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~-~~L~~~~ 102 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLY-KFLNAKF 102 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHH-HHHHHHT
T ss_pred CCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHH-HHHHHhc
Confidence 45889999999999999998753 56899999999876 6666544
No 310
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=96.89 E-value=0.01 Score=44.58 Aligned_cols=93 Identities=19% Similarity=0.133 Sum_probs=60.2
Q ss_pred CCCcEEEeCCCc-cHHHHHHHHhCCC-cEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCC---CC-C-CCCCCcc
Q 030558 8 ERRRCIELGSGT-GALAIFLRKAMNL-DITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGD---AF-P-IPNPDWD 80 (175)
Q Consensus 8 ~~~~vLDlGcG~-G~~~~~l~~~~~~-~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~-~~~~~fD 80 (175)
+|++||=+|+|. |..+..+++..|. +|+++|.+++.+ +.++.. +.. ..+.....+ .. . .....+|
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~-~~~~~~----Ga~---~~~~~~~~~~~~~v~~~~~g~g~D 238 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRR-ELAKKV----GAD---YVINPFEEDVVKEVMDITDGNGVD 238 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHH-HHHHHH----TCS---EEECTTTSCHHHHHHHHTTTSCEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHh----CCC---EEECCCCcCHHHHHHHHcCCCCCC
Confidence 789999999974 8888888888788 899999998765 444321 110 011110000 00 0 1123699
Q ss_pred EEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 81 LILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 81 ~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
+|+-...- + ..++...+.++++|+++..
T Consensus 239 ~vid~~g~------~---~~~~~~~~~l~~~G~iv~~ 266 (348)
T 2d8a_A 239 VFLEFSGA------P---KALEQGLQAVTPAGRVSLL 266 (348)
T ss_dssp EEEECSCC------H---HHHHHHHHHEEEEEEEEEC
T ss_pred EEEECCCC------H---HHHHHHHHHHhcCCEEEEE
Confidence 99875331 1 5678889999999988776
No 311
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=96.84 E-value=0.0084 Score=45.29 Aligned_cols=97 Identities=10% Similarity=0.038 Sum_probs=63.3
Q ss_pred cccCCCcEEEeCCCc-cHHHHHHHHhCCCc-EEEEeCChHHHHHHHHHHHhhCCCCCCcceeec------cCCCCC-C-C
Q 030558 5 EWIERRRCIELGSGT-GALAIFLRKAMNLD-ITTSDYNDQEIEDNIAYNSTTNGITPALPHIKH------SWGDAF-P-I 74 (175)
Q Consensus 5 ~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~-v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~------~~~~~~-~-~ 74 (175)
...+|.+||=+|+|. |..+..+++..|.+ |+++|.+++.+ +.++.. ..... . ... ++.+.. . .
T Consensus 176 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~a~~l-~~~~~----~-~~~~~~~~~~~~~~v~~~t 248 (363)
T 3m6i_A 176 GVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRL-KFAKEI-CPEVV----T-HKVERLSAEESAKKIVESF 248 (363)
T ss_dssp TCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHH-HHHHHH-CTTCE----E-EECCSCCHHHHHHHHHHHT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHh-chhcc----c-ccccccchHHHHHHHHHHh
Confidence 345788999999975 89999999988887 99999999876 444432 21110 0 000 010000 0 1
Q ss_pred CCCCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 75 PNPDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 75 ~~~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
....+|+|+-.-.- + ..++...++++++|++++.
T Consensus 249 ~g~g~Dvvid~~g~------~---~~~~~~~~~l~~~G~iv~~ 282 (363)
T 3m6i_A 249 GGIEPAVALECTGV------E---SSIAAAIWAVKFGGKVFVI 282 (363)
T ss_dssp SSCCCSEEEECSCC------H---HHHHHHHHHSCTTCEEEEC
T ss_pred CCCCCCEEEECCCC------h---HHHHHHHHHhcCCCEEEEE
Confidence 13479999875321 1 4678899999999998876
No 312
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.84 E-value=0.00077 Score=50.80 Aligned_cols=91 Identities=16% Similarity=0.175 Sum_probs=62.2
Q ss_pred cccCCCcEEEeCCCc-cHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEE
Q 030558 5 EWIERRRCIELGSGT-GALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLIL 83 (175)
Q Consensus 5 ~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~ 83 (175)
...+|.+||=+|+|. |..+..+++..|.+|+++|.+++.+ +.++. .+. ..+. . +.... ...+|+|+
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~-~~~~~----lGa----~~v~-~--~~~~~-~~~~D~vi 239 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKK-QDALS----MGV----KHFY-T--DPKQC-KEELDFII 239 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTH-HHHHH----TTC----SEEE-S--SGGGC-CSCEEEEE
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHH-HHHHh----cCC----Ceec-C--CHHHH-hcCCCEEE
Confidence 455789999999986 8888999998899999999999776 44432 122 1111 1 11111 12799998
Q ss_pred eCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 84 ASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 84 ~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
-.-.- . ..++...++++|+|+++..
T Consensus 240 d~~g~---~------~~~~~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 240 STIPT---H------YDLKDYLKLLTYNGDLALV 264 (348)
T ss_dssp ECCCS---C------CCHHHHHTTEEEEEEEEEC
T ss_pred ECCCc---H------HHHHHHHHHHhcCCEEEEE
Confidence 64331 1 2567788999999998887
No 313
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=96.78 E-value=0.012 Score=43.93 Aligned_cols=69 Identities=23% Similarity=0.247 Sum_probs=44.0
Q ss_pred cEEEeCCCccHHHHHHHHhCCCc-EEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCCcc
Q 030558 11 RCIELGSGTGALAIFLRKAMNLD-ITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASDIL 88 (175)
Q Consensus 11 ~vLDlGcG~G~~~~~l~~~~~~~-v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~~l 88 (175)
+|+||=||.|.+++-+.+. |.+ |.++|+++..+ +..+.|... ..+..+..+.....-...|++++....
T Consensus 2 kvidLFsG~GG~~~G~~~a-G~~~v~a~e~d~~a~-~ty~~N~~~-------~~~~~DI~~i~~~~~~~~D~l~ggpPC 71 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKA-GFRIICANEYDKSIW-KTYESNHSA-------KLIKGDISKISSDEFPKCDGIIGGPPS 71 (331)
T ss_dssp EEEEESCTTCHHHHHHHHT-TCEEEEEEECCTTTH-HHHHHHCCS-------EEEESCGGGCCGGGSCCCSEEECCCCG
T ss_pred eEEEeCcCccHHHHHHHHC-CCEEEEEEeCCHHHH-HHHHHHCCC-------CcccCChhhCCHhhCCcccEEEecCCC
Confidence 6999999999999999776 555 78999999886 555555321 112222211111112358999886554
No 314
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=96.74 E-value=0.00094 Score=46.05 Aligned_cols=93 Identities=14% Similarity=0.115 Sum_probs=59.5
Q ss_pred cccCCCcEEEeCC--CccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCC------C-CC
Q 030558 5 EWIERRRCIELGS--GTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAF------P-IP 75 (175)
Q Consensus 5 ~~~~~~~vLDlGc--G~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-~~ 75 (175)
...+|++||-.|+ |.|.....+++..|.+|+++|.+++.+ +.++. .+. .. ..+..+.. . ..
T Consensus 35 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~-~~~~~----~g~----~~-~~d~~~~~~~~~~~~~~~ 104 (198)
T 1pqw_A 35 RLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKR-EMLSR----LGV----EY-VGDSRSVDFADEILELTD 104 (198)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHH-HHHHT----TCC----SE-EEETTCSTHHHHHHHHTT
T ss_pred CCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHH----cCC----CE-EeeCCcHHHHHHHHHHhC
Confidence 4557899999994 458777777776688999999998765 33322 122 11 11111110 0 11
Q ss_pred CCCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 76 NPDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 76 ~~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
...+|+++.+.. . ..++...++++|+|+++..
T Consensus 105 ~~~~D~vi~~~g-------~---~~~~~~~~~l~~~G~~v~~ 136 (198)
T 1pqw_A 105 GYGVDVVLNSLA-------G---EAIQRGVQILAPGGRFIEL 136 (198)
T ss_dssp TCCEEEEEECCC-------T---HHHHHHHHTEEEEEEEEEC
T ss_pred CCCCeEEEECCc-------h---HHHHHHHHHhccCCEEEEE
Confidence 236999986532 1 4678889999999988876
No 315
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.72 E-value=0.0012 Score=50.24 Aligned_cols=96 Identities=15% Similarity=0.136 Sum_probs=61.3
Q ss_pred cccCCCcEEEeCCCc-cHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEE
Q 030558 5 EWIERRRCIELGSGT-GALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLIL 83 (175)
Q Consensus 5 ~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~ 83 (175)
...+|.+||-+|+|. |..+..+++..|.+|+++|.+++.+ +.++.. +.. ..+.....+......+.+|+|+
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~-~~a~~l----Ga~---~vi~~~~~~~~~~~~~g~Dvvi 262 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKR-EAAKAL----GAD---EVVNSRNADEMAAHLKSFDFIL 262 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGH-HHHHHH----TCS---EEEETTCHHHHHTTTTCEEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHc----CCc---EEeccccHHHHHHhhcCCCEEE
Confidence 345789999999985 8888899998888999999999776 444431 110 0111100000000114799998
Q ss_pred eCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 84 ASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 84 ~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
-.-.- . ..++...++++|+|+++..
T Consensus 263 d~~g~---~------~~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 263 NTVAA---P------HNLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp ECCSS---C------CCHHHHHTTEEEEEEEEEC
T ss_pred ECCCC---H------HHHHHHHHHhccCCEEEEe
Confidence 65332 1 3456788999999988775
No 316
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=96.70 E-value=0.001 Score=50.16 Aligned_cols=96 Identities=14% Similarity=0.064 Sum_probs=62.6
Q ss_pred cccCCCcEEEeCCCc-cHHHHHHHHhCCC-cEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCC---CC-C-CCCC
Q 030558 5 EWIERRRCIELGSGT-GALAIFLRKAMNL-DITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGD---AF-P-IPNP 77 (175)
Q Consensus 5 ~~~~~~~vLDlGcG~-G~~~~~l~~~~~~-~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~-~~~~ 77 (175)
...+|.+||=+|+|. |..+..+++..|. +|+++|.+++.+ +.+++.. .. ..+.....+ .. . ....
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~-~~~~~lG----a~---~vi~~~~~~~~~~v~~~t~g~ 234 (352)
T 3fpc_A 163 NIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCC-DIALEYG----AT---DIINYKNGDIVEQILKATDGK 234 (352)
T ss_dssp TCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHH-HHHHHHT----CC---EEECGGGSCHHHHHHHHTTTC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHH-HHHHHhC----Cc---eEEcCCCcCHHHHHHHHcCCC
Confidence 345789999999986 8889999998887 799999998765 4444321 10 111111111 00 1 1223
Q ss_pred CccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 78 DWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 78 ~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
.+|+|+-.-.- + .+++...++++|+|+++..
T Consensus 235 g~D~v~d~~g~------~---~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 235 GVDKVVIAGGD------V---HTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp CEEEEEECSSC------T---THHHHHHHHEEEEEEEEEC
T ss_pred CCCEEEECCCC------h---HHHHHHHHHHhcCCEEEEe
Confidence 69999864221 1 5678889999999998876
No 317
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=96.68 E-value=0.003 Score=48.47 Aligned_cols=104 Identities=13% Similarity=0.043 Sum_probs=63.3
Q ss_pred cccCCCcEEEeCCCc-cHHHHHHHHhCCC-cEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCC----C-CC-CC
Q 030558 5 EWIERRRCIELGSGT-GALAIFLRKAMNL-DITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDA----F-PI-PN 76 (175)
Q Consensus 5 ~~~~~~~vLDlGcG~-G~~~~~l~~~~~~-~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~-~~ 76 (175)
...+|.+||-+|||. |..+..+++..+. +|+++|.+++.+ +.++. .+. ..+.....+. . .. ..
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~a~~----lGa----~~i~~~~~~~~~~~~~~~~~g 252 (398)
T 2dph_A 182 GVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERL-KLLSD----AGF----ETIDLRNSAPLRDQIDQILGK 252 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHH-HHHHT----TTC----EEEETTSSSCHHHHHHHHHSS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHH-HHHHH----cCC----cEEcCCCcchHHHHHHHHhCC
Confidence 345789999999986 9999999887787 899999999775 44332 122 1121111110 0 00 12
Q ss_pred CCccEEEeCCcccCccc-----chHHHHHHHHHHhhcCCCCceeec
Q 030558 77 PDWDLILASDILLYVKQ-----YSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 77 ~~fD~i~~~~~l~~~~~-----~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
..+|+|+-.-.-..... .......+++..++++++|++++.
T Consensus 253 ~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 253 PEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp SCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECC
T ss_pred CCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEe
Confidence 26999987543200000 000115788899999999988765
No 318
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=96.66 E-value=0.0012 Score=48.44 Aligned_cols=93 Identities=16% Similarity=0.119 Sum_probs=52.7
Q ss_pred cCCCcEEEeCC------CccHHHHHHHHhC--CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCC
Q 030558 7 IERRRCIELGS------GTGALAIFLRKAM--NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPD 78 (175)
Q Consensus 7 ~~~~~vLDlGc------G~G~~~~~l~~~~--~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (175)
.-|.+|||+|+ -+|+. .+++.. +..|+++|+++-.. .. . ..+..+... ....+.
T Consensus 108 p~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~s-----------da--~-~~IqGD~~~--~~~~~k 169 (344)
T 3r24_A 108 PYNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFVS-----------DA--D-STLIGDCAT--VHTANK 169 (344)
T ss_dssp CTTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCBC-----------SS--S-EEEESCGGG--EEESSC
T ss_pred cCCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCccccc-----------CC--C-eEEEccccc--cccCCC
Confidence 34899999996 56773 343333 34799999988331 00 0 112222211 112368
Q ss_pred ccEEEeCCcc--cCccc------chHHHHHHHHHHhhcCCCCceeec
Q 030558 79 WDLILASDIL--LYVKQ------YSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 79 fD~i~~~~~l--~~~~~------~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
||+|+|-..- .-..+ ..-...++.-+.+.|+|||.|++-
T Consensus 170 ~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVK 216 (344)
T 3r24_A 170 WDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVK 216 (344)
T ss_dssp EEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEE
Confidence 9999982111 00011 112346677777899999988885
No 319
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=96.63 E-value=0.0052 Score=47.10 Aligned_cols=100 Identities=12% Similarity=0.080 Sum_probs=63.5
Q ss_pred ccCCCcEEEeCCCc-cHHHHHHHHhCCC-cEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCC-----C-CCCC
Q 030558 6 WIERRRCIELGSGT-GALAIFLRKAMNL-DITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAF-----P-IPNP 77 (175)
Q Consensus 6 ~~~~~~vLDlGcG~-G~~~~~l~~~~~~-~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~ 77 (175)
..+|.+||=+|+|. |..+..+|+..|. .|+++|.+++.+ +.++. .+. ..+.....+.. . ....
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~-~~a~~----lGa----~~i~~~~~~~~~~~v~~~t~g~ 253 (398)
T 1kol_A 183 VGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARL-AHAKA----QGF----EIADLSLDTPLHEQIAALLGEP 253 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHH-HHHHH----TTC----EEEETTSSSCHHHHHHHHHSSS
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHH-HHHHH----cCC----cEEccCCcchHHHHHHHHhCCC
Confidence 45789999999976 9999999998887 699999999776 44432 122 11211111100 0 0123
Q ss_pred CccEEEeCCcc---------cCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 78 DWDLILASDIL---------LYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 78 ~fD~i~~~~~l---------~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
.+|+|+-.-.- ++.+..+ .+++...++++++|++++.
T Consensus 254 g~Dvvid~~G~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 254 EVDCAVDAVGFEARGHGHEGAKHEAPA---TVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp CEEEEEECCCTTCBCSSTTGGGSBCTT---HHHHHHHHHEEEEEEEEEC
T ss_pred CCCEEEECCCCcccccccccccccchH---HHHHHHHHHHhcCCEEEEe
Confidence 69999865332 0111122 5788899999999988775
No 320
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=96.53 E-value=0.006 Score=45.30 Aligned_cols=89 Identities=12% Similarity=0.192 Sum_probs=58.9
Q ss_pred cEEEeCC-C-ccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccC-CCCCCCCCCCccEEEeCCc
Q 030558 11 RCIELGS-G-TGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSW-GDAFPIPNPDWDLILASDI 87 (175)
Q Consensus 11 ~vLDlGc-G-~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~fD~i~~~~~ 87 (175)
+||=.|+ | .|..+..+++..|.+|+++|.+++.+ +.++.. +.. ..+.... ........+.+|+|+-.-.
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~-~~~~~l----Ga~---~vi~~~~~~~~~~~~~~~~d~v~d~~g 220 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTH-GYLKSL----GAN---RILSRDEFAESRPLEKQLWAGAIDTVG 220 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGH-HHHHHH----TCS---EEEEGGGSSCCCSSCCCCEEEEEESSC
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHhc----CCC---EEEecCCHHHHHhhcCCCccEEEECCC
Confidence 4999997 5 59999999998899999999999776 554432 110 1111111 1111223457998876421
Q ss_pred ccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 88 LLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 88 l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
. ..++...++++|+|+++..
T Consensus 221 --------~--~~~~~~~~~l~~~G~iv~~ 240 (324)
T 3nx4_A 221 --------D--KVLAKVLAQMNYGGCVAAC 240 (324)
T ss_dssp --------H--HHHHHHHHTEEEEEEEEEC
T ss_pred --------c--HHHHHHHHHHhcCCEEEEE
Confidence 1 4788899999999988876
No 321
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=96.53 E-value=0.0023 Score=48.72 Aligned_cols=96 Identities=11% Similarity=0.058 Sum_probs=62.6
Q ss_pred cccCCCcEEEeCCCc-cHHHHHHHHhCCC-cEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccC-CCCC-----CCCC
Q 030558 5 EWIERRRCIELGSGT-GALAIFLRKAMNL-DITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSW-GDAF-----PIPN 76 (175)
Q Consensus 5 ~~~~~~~vLDlGcG~-G~~~~~l~~~~~~-~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~ 76 (175)
...+|.+||=+|+|. |..+..+++..+. +|+++|.+++.+ +.+++ .+.. ..+.... .+.. ....
T Consensus 190 ~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~-~~a~~----lGa~---~vi~~~~~~~~~~~~i~~~~~ 261 (378)
T 3uko_A 190 KVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKY-ETAKK----FGVN---EFVNPKDHDKPIQEVIVDLTD 261 (378)
T ss_dssp CCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHH-HHHHT----TTCC---EEECGGGCSSCHHHHHHHHTT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH-HHHHH----cCCc---EEEccccCchhHHHHHHHhcC
Confidence 455789999999985 8888899888787 799999999776 44332 1220 1111110 0000 1122
Q ss_pred CCccEEEeCCcccCcccchHHHHHHHHHHhhcCCC-Cceeec
Q 030558 77 PDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPK-DSQVGH 117 (175)
Q Consensus 77 ~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pg-G~~~~~ 117 (175)
+.+|+|+-... .+ ..++...+.++++ |++++.
T Consensus 262 gg~D~vid~~g------~~---~~~~~~~~~l~~g~G~iv~~ 294 (378)
T 3uko_A 262 GGVDYSFECIG------NV---SVMRAALECCHKGWGTSVIV 294 (378)
T ss_dssp SCBSEEEECSC------CH---HHHHHHHHTBCTTTCEEEEC
T ss_pred CCCCEEEECCC------CH---HHHHHHHHHhhccCCEEEEE
Confidence 37999987532 12 5778899999997 988876
No 322
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=96.53 E-value=0.012 Score=44.57 Aligned_cols=96 Identities=17% Similarity=0.139 Sum_probs=62.1
Q ss_pred cccCCCcEEEeCCCc-cHHHHHHHHhCCC-cEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccC-CCCC-----CCCC
Q 030558 5 EWIERRRCIELGSGT-GALAIFLRKAMNL-DITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSW-GDAF-----PIPN 76 (175)
Q Consensus 5 ~~~~~~~vLDlGcG~-G~~~~~l~~~~~~-~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~ 76 (175)
...+|++||=+|+|. |..+..+++..+. +|+++|.+++.+ +.+++. +.. ..+.... .+.. ....
T Consensus 189 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~-~~~~~l----Ga~---~vi~~~~~~~~~~~~~~~~~~ 260 (374)
T 1cdo_A 189 KVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKF-EKAKVF----GAT---DFVNPNDHSEPISQVLSKMTN 260 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGH-HHHHHT----TCC---EEECGGGCSSCHHHHHHHHHT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHH-HHHHHh----CCc---eEEeccccchhHHHHHHHHhC
Confidence 455789999999975 8888889888888 799999999776 444321 220 1111110 0000 0112
Q ss_pred CCccEEEeCCcccCcccchHHHHHHHHHHhhcCCC-Cceeec
Q 030558 77 PDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPK-DSQVGH 117 (175)
Q Consensus 77 ~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pg-G~~~~~ 117 (175)
+.+|+|+-.-.- + ..++...++++++ |+++..
T Consensus 261 ~g~D~vid~~g~------~---~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 261 GGVDFSLECVGN------V---GVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp SCBSEEEECSCC------H---HHHHHHHHTBCTTTCEEEEC
T ss_pred CCCCEEEECCCC------H---HHHHHHHHHhhcCCcEEEEE
Confidence 368999865321 2 5678899999999 988876
No 323
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=96.51 E-value=0.0015 Score=48.79 Aligned_cols=93 Identities=10% Similarity=0.058 Sum_probs=60.8
Q ss_pred cccCCCcEEEeCC--CccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCC--CC-----CCC
Q 030558 5 EWIERRRCIELGS--GTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGD--AF-----PIP 75 (175)
Q Consensus 5 ~~~~~~~vLDlGc--G~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~ 75 (175)
...+|++||-.|+ |.|..+..+++..|.+|+++|.+++.+ +.++. . +. . ..++..+ .. ...
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~-~~~~~-~---g~----~-~~~d~~~~~~~~~~~~~~~ 211 (333)
T 1v3u_A 142 GVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKI-AYLKQ-I---GF----D-AAFNYKTVNSLEEALKKAS 211 (333)
T ss_dssp CCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHH-T---TC----S-EEEETTSCSCHHHHHHHHC
T ss_pred CCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHh-c---CC----c-EEEecCCHHHHHHHHHHHh
Confidence 4557899999997 468888888787788999999998775 43322 1 11 0 1112111 00 001
Q ss_pred CCCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 76 NPDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 76 ~~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
.+.+|+++.+..- ..++...++++++|++++.
T Consensus 212 ~~~~d~vi~~~g~----------~~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 212 PDGYDCYFDNVGG----------EFLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp TTCEEEEEESSCH----------HHHHHHHTTEEEEEEEEEC
T ss_pred CCCCeEEEECCCh----------HHHHHHHHHHhcCCEEEEE
Confidence 2479999876431 3478888999999988776
No 324
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=96.50 E-value=0.0036 Score=47.41 Aligned_cols=95 Identities=16% Similarity=0.160 Sum_probs=62.3
Q ss_pred ccccCCCcEEEeCCCc-cHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCC-----C-CCC
Q 030558 4 REWIERRRCIELGSGT-GALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAF-----P-IPN 76 (175)
Q Consensus 4 ~~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~ 76 (175)
....+|.+||=+|+|. |..+..+++..|.+|+++|.+++.+ +.++.. +.. ..+. ...+.. . ...
T Consensus 185 ~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~-~~~~~l----Ga~---~vi~-~~~~~~~~~v~~~~~g 255 (363)
T 3uog_A 185 GHLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKL-DRAFAL----GAD---HGIN-RLEEDWVERVYALTGD 255 (363)
T ss_dssp TCCCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHH----TCS---EEEE-TTTSCHHHHHHHHHTT
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhH-HHHHHc----CCC---EEEc-CCcccHHHHHHHHhCC
Confidence 3456789999999985 8888999998899999999998775 444322 110 1111 000000 0 112
Q ss_pred CCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 77 PDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 77 ~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
..+|+|+-...- ..++...++++|+|++++.
T Consensus 256 ~g~D~vid~~g~----------~~~~~~~~~l~~~G~iv~~ 286 (363)
T 3uog_A 256 RGADHILEIAGG----------AGLGQSLKAVAPDGRISVI 286 (363)
T ss_dssp CCEEEEEEETTS----------SCHHHHHHHEEEEEEEEEE
T ss_pred CCceEEEECCCh----------HHHHHHHHHhhcCCEEEEE
Confidence 379998864321 3467788899999988876
No 325
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=96.49 E-value=0.011 Score=44.75 Aligned_cols=96 Identities=17% Similarity=0.067 Sum_probs=62.2
Q ss_pred cccCCCcEEEeCCCc-cHHHHHHHHhCCC-cEEEEeCChHHHHHHHHHHHhhCCCCCCcceeecc-----CCCCC-CCCC
Q 030558 5 EWIERRRCIELGSGT-GALAIFLRKAMNL-DITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHS-----WGDAF-PIPN 76 (175)
Q Consensus 5 ~~~~~~~vLDlGcG~-G~~~~~l~~~~~~-~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~ 76 (175)
...+|.+||=+|+|. |..+..+|+..+. +|+++|.+++.+ +.++.. +.. ..+... +.+.. ....
T Consensus 188 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~a~~l----Ga~---~vi~~~~~~~~~~~~i~~~t~ 259 (373)
T 1p0f_A 188 KVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKF-PKAIEL----GAT---ECLNPKDYDKPIYEVICEKTN 259 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGH-HHHHHT----TCS---EEECGGGCSSCHHHHHHHHTT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHH-HHHHHc----CCc---EEEecccccchHHHHHHHHhC
Confidence 455789999999985 8888888887787 799999999775 444321 220 111111 00000 1112
Q ss_pred CCccEEEeCCcccCcccchHHHHHHHHHHhhcCCC-Cceeec
Q 030558 77 PDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPK-DSQVGH 117 (175)
Q Consensus 77 ~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pg-G~~~~~ 117 (175)
+.+|+|+-.-.- + ..++...++++++ |+++..
T Consensus 260 gg~Dvvid~~g~------~---~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 260 GGVDYAVECAGR------I---ETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp SCBSEEEECSCC------H---HHHHHHHHTBCTTTCEEEEC
T ss_pred CCCCEEEECCCC------H---HHHHHHHHHHhcCCCEEEEE
Confidence 379999865321 2 5678899999999 988776
No 326
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=96.48 E-value=0.014 Score=44.25 Aligned_cols=96 Identities=17% Similarity=0.107 Sum_probs=62.0
Q ss_pred cccCCCcEEEeCCCc-cHHHHHHHHhCCC-cEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccC-CCCC-----CCCC
Q 030558 5 EWIERRRCIELGSGT-GALAIFLRKAMNL-DITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSW-GDAF-----PIPN 76 (175)
Q Consensus 5 ~~~~~~~vLDlGcG~-G~~~~~l~~~~~~-~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~ 76 (175)
...+|.+||=+|+|. |..+..+++..+. +|+++|.+++.+ +.++.. +.. ..+.... .+.. ....
T Consensus 192 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~a~~l----Ga~---~vi~~~~~~~~~~~~v~~~~~ 263 (376)
T 1e3i_A 192 KVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKF-PKAKAL----GAT---DCLNPRELDKPVQDVITELTA 263 (376)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGH-HHHHHT----TCS---EEECGGGCSSCHHHHHHHHHT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH-HHHHHh----CCc---EEEccccccchHHHHHHHHhC
Confidence 445789999999985 8888899998888 799999999775 444321 220 1111110 0000 0112
Q ss_pred CCccEEEeCCcccCcccchHHHHHHHHHHhhcCCC-Cceeec
Q 030558 77 PDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPK-DSQVGH 117 (175)
Q Consensus 77 ~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pg-G~~~~~ 117 (175)
+.+|+|+-.-. .+ ..++...+.++++ |++++.
T Consensus 264 ~g~Dvvid~~G------~~---~~~~~~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 264 GGVDYSLDCAG------TA---QTLKAAVDCTVLGWGSCTVV 296 (376)
T ss_dssp SCBSEEEESSC------CH---HHHHHHHHTBCTTTCEEEEC
T ss_pred CCccEEEECCC------CH---HHHHHHHHHhhcCCCEEEEE
Confidence 37899986432 12 5678899999999 988776
No 327
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=96.46 E-value=0.0025 Score=47.93 Aligned_cols=97 Identities=13% Similarity=0.023 Sum_probs=62.3
Q ss_pred cccCCCcEEEeCCCc-cHHHHHHHHhC--CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceee-ccCCCCCCCCCCCcc
Q 030558 5 EWIERRRCIELGSGT-GALAIFLRKAM--NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIK-HSWGDAFPIPNPDWD 80 (175)
Q Consensus 5 ~~~~~~~vLDlGcG~-G~~~~~l~~~~--~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~fD 80 (175)
.. +|.+||=+|+|. |..+..+++.. |.+|+++|.+++.+ +.++.. +....+.... -++..... ....+|
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~-~~~~~l----Ga~~vi~~~~~~~~~~~~~-~g~g~D 240 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHR-DFALEL----GADYVSEMKDAESLINKLT-DGLGAS 240 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHH-HHHHHH----TCSEEECHHHHHHHHHHHH-TTCCEE
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHH-HHHHHh----CCCEEeccccchHHHHHhh-cCCCcc
Confidence 45 789999999975 88889999988 88999999998775 444332 1100000000 00000000 123699
Q ss_pred EEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 81 LILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 81 ~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
+|+-.-.- + ..++...++++|+|+++..
T Consensus 241 ~vid~~g~------~---~~~~~~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 241 IAIDLVGT------E---ETTYNLGKLLAQEGAIILV 268 (344)
T ss_dssp EEEESSCC------H---HHHHHHHHHEEEEEEEEEC
T ss_pred EEEECCCC------h---HHHHHHHHHhhcCCEEEEe
Confidence 99875332 1 4678889999999988776
No 328
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=96.46 E-value=0.014 Score=44.24 Aligned_cols=96 Identities=17% Similarity=0.129 Sum_probs=62.0
Q ss_pred cccCCCcEEEeCCCc-cHHHHHHHHhCCC-cEEEEeCChHHHHHHHHHHHhhCCCCCCcceeecc-----CCCCC-CCCC
Q 030558 5 EWIERRRCIELGSGT-GALAIFLRKAMNL-DITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHS-----WGDAF-PIPN 76 (175)
Q Consensus 5 ~~~~~~~vLDlGcG~-G~~~~~l~~~~~~-~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~ 76 (175)
...+|.+||=+|+|. |..+..+++..+. +|+++|.+++.+ +.++.. +.. ..+... +.+.. ....
T Consensus 187 ~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~-~~~~~l----Ga~---~vi~~~~~~~~~~~~v~~~~~ 258 (373)
T 2fzw_A 187 KLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKF-ARAKEF----GAT---ECINPQDFSKPIQEVLIEMTD 258 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGH-HHHHHH----TCS---EEECGGGCSSCHHHHHHHHTT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH-HHHHHc----CCc---eEeccccccccHHHHHHHHhC
Confidence 455789999999975 8888888887787 799999999776 444422 110 011111 00000 1112
Q ss_pred CCccEEEeCCcccCcccchHHHHHHHHHHhhcCCC-Cceeec
Q 030558 77 PDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPK-DSQVGH 117 (175)
Q Consensus 77 ~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pg-G~~~~~ 117 (175)
+.+|+|+-...- + ..++...+.++++ |+++..
T Consensus 259 ~g~D~vid~~g~------~---~~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 259 GGVDYSFECIGN------V---KVMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp SCBSEEEECSCC------H---HHHHHHHHTBCTTTCEEEEC
T ss_pred CCCCEEEECCCc------H---HHHHHHHHhhccCCcEEEEE
Confidence 379999865321 2 5678899999999 988876
No 329
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=96.43 E-value=0.0051 Score=45.96 Aligned_cols=95 Identities=16% Similarity=0.076 Sum_probs=61.3
Q ss_pred cccCCCcEEEeC-CC-ccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCC---C-C-CCCC
Q 030558 5 EWIERRRCIELG-SG-TGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDA---F-P-IPNP 77 (175)
Q Consensus 5 ~~~~~~~vLDlG-cG-~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~-~~~~ 77 (175)
...+|++||=.| +| .|..+..+++..|.+|+++|.+++.+ +.++.. +.. ..+.....+. . . ....
T Consensus 145 ~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~-~~~~~~----ga~---~~~~~~~~~~~~~~~~~~~~~ 216 (334)
T 3qwb_A 145 HVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKL-KIAKEY----GAE---YLINASKEDILRQVLKFTNGK 216 (334)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHHT----TCS---EEEETTTSCHHHHHHHHTTTS
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHc----CCc---EEEeCCCchHHHHHHHHhCCC
Confidence 456789999999 44 58888888888899999999998775 443321 220 1111111110 0 0 1134
Q ss_pred CccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 78 DWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 78 ~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
.+|+|+-+..- ..++...++++++|+++..
T Consensus 217 g~D~vid~~g~----------~~~~~~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 217 GVDASFDSVGK----------DTFEISLAALKRKGVFVSF 246 (334)
T ss_dssp CEEEEEECCGG----------GGHHHHHHHEEEEEEEEEC
T ss_pred CceEEEECCCh----------HHHHHHHHHhccCCEEEEE
Confidence 69999875331 3567788899999988876
No 330
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=96.40 E-value=0.018 Score=43.75 Aligned_cols=96 Identities=17% Similarity=0.127 Sum_probs=62.0
Q ss_pred cccCCCcEEEeCCCc-cHHHHHHHHhCCC-cEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccC-CCCC-----CCCC
Q 030558 5 EWIERRRCIELGSGT-GALAIFLRKAMNL-DITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSW-GDAF-----PIPN 76 (175)
Q Consensus 5 ~~~~~~~vLDlGcG~-G~~~~~l~~~~~~-~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~ 76 (175)
...+|.+||=+|+|. |..+..+++..+. +|+++|.+++.+ +.+++. +.. ..+.... .+.. ....
T Consensus 188 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~-~~~~~l----Ga~---~vi~~~~~~~~~~~~~~~~~~ 259 (374)
T 2jhf_A 188 KVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKF-AKAKEV----GAT---ECVNPQDYKKPIQEVLTEMSN 259 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGH-HHHHHT----TCS---EEECGGGCSSCHHHHHHHHTT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH-HHHHHh----CCc---eEecccccchhHHHHHHHHhC
Confidence 455789999999975 8888888888887 799999999776 444321 220 1111110 0000 1112
Q ss_pred CCccEEEeCCcccCcccchHHHHHHHHHHhhcCCC-Cceeec
Q 030558 77 PDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPK-DSQVGH 117 (175)
Q Consensus 77 ~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pg-G~~~~~ 117 (175)
+.+|+|+-.-.- + ..++...++++++ |+++..
T Consensus 260 ~g~D~vid~~g~------~---~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 260 GGVDFSFEVIGR------L---DTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp SCBSEEEECSCC------H---HHHHHHHHHBCTTTCEEEEC
T ss_pred CCCcEEEECCCC------H---HHHHHHHHHhhcCCcEEEEe
Confidence 379999865321 2 5678889999999 988776
No 331
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=96.36 E-value=0.0054 Score=45.95 Aligned_cols=96 Identities=15% Similarity=0.055 Sum_probs=60.2
Q ss_pred ccccCCCcEEEeCCC--ccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCC---C-C-CCC
Q 030558 4 REWIERRRCIELGSG--TGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDA---F-P-IPN 76 (175)
Q Consensus 4 ~~~~~~~~vLDlGcG--~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~-~~~ 76 (175)
....+|++||=+|+| .|..+..+++..|.+|+++|.+++.+ +.++.. +.. ..+.....+. . . ...
T Consensus 140 ~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~-~~~~~l----ga~---~~~~~~~~~~~~~~~~~~~~ 211 (340)
T 3gms_A 140 LNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHT-EELLRL----GAA---YVIDTSTAPLYETVMELTNG 211 (340)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTH-HHHHHH----TCS---EEEETTTSCHHHHHHHHTTT
T ss_pred cccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHhC----CCc---EEEeCCcccHHHHHHHHhCC
Confidence 345678999999986 58888888887799999999998775 444432 110 0111110000 0 0 112
Q ss_pred CCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 77 PDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 77 ~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
..+|+|+-+..- ....+..++++++|+++..
T Consensus 212 ~g~Dvvid~~g~----------~~~~~~~~~l~~~G~iv~~ 242 (340)
T 3gms_A 212 IGADAAIDSIGG----------PDGNELAFSLRPNGHFLTI 242 (340)
T ss_dssp SCEEEEEESSCH----------HHHHHHHHTEEEEEEEEEC
T ss_pred CCCcEEEECCCC----------hhHHHHHHHhcCCCEEEEE
Confidence 379999875332 2223455899999988876
No 332
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=96.32 E-value=0.005 Score=46.19 Aligned_cols=94 Identities=14% Similarity=0.065 Sum_probs=61.4
Q ss_pred cccCCCcEEEeCC--CccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCC--CC-----CCC
Q 030558 5 EWIERRRCIELGS--GTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGD--AF-----PIP 75 (175)
Q Consensus 5 ~~~~~~~vLDlGc--G~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~ 75 (175)
...+|++||-.|+ |.|..+..+++..|.+|+++|.+++.+ +.+++. .+. .. .++..+ .. ...
T Consensus 152 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~-~~~~~~---~g~----~~-~~d~~~~~~~~~~~~~~~ 222 (345)
T 2j3h_A 152 SPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKV-DLLKTK---FGF----DD-AFNYKEESDLTAALKRCF 222 (345)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHHT---SCC----SE-EEETTSCSCSHHHHHHHC
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHH---cCC----ce-EEecCCHHHHHHHHHHHh
Confidence 4557899999997 468888888887788999999998765 433311 122 11 111111 11 001
Q ss_pred CCCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 76 NPDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 76 ~~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
.+.+|+++.+..- ..++...++++++|++++.
T Consensus 223 ~~~~d~vi~~~g~----------~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 223 PNGIDIYFENVGG----------KMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp TTCEEEEEESSCH----------HHHHHHHTTEEEEEEEEEC
T ss_pred CCCCcEEEECCCH----------HHHHHHHHHHhcCCEEEEE
Confidence 2468999875331 4678889999999988776
No 333
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=96.30 E-value=0.0093 Score=44.68 Aligned_cols=92 Identities=14% Similarity=0.066 Sum_probs=61.0
Q ss_pred ccCCCcEEEeCCC-ccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCC-C-----CCCCCC
Q 030558 6 WIERRRCIELGSG-TGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDA-F-----PIPNPD 78 (175)
Q Consensus 6 ~~~~~~vLDlGcG-~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~ 78 (175)
..+|++||=+|+| .|..+..+++..|.+|+++|.+++.+ +.++. .+. .. .++..+. . ... +.
T Consensus 162 ~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~-~~~~~----lGa----~~-~~d~~~~~~~~~~~~~~-~~ 230 (339)
T 1rjw_A 162 AKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKL-ELAKE----LGA----DL-VVNPLKEDAAKFMKEKV-GG 230 (339)
T ss_dssp CCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHH-HHHHH----TTC----SE-EECTTTSCHHHHHHHHH-SS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHH----CCC----CE-EecCCCccHHHHHHHHh-CC
Confidence 4568999999997 48888888888889999999998775 44332 122 11 1111110 0 001 46
Q ss_pred ccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 79 WDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 79 fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
+|+|+-+..- + ..++...++++++|+++..
T Consensus 231 ~d~vid~~g~------~---~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 231 VHAAVVTAVS------K---PAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp EEEEEESSCC------H---HHHHHHHHHEEEEEEEEEC
T ss_pred CCEEEECCCC------H---HHHHHHHHHhhcCCEEEEe
Confidence 8998875331 1 5678888999999988776
No 334
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=96.29 E-value=0.0064 Score=45.28 Aligned_cols=95 Identities=15% Similarity=0.085 Sum_probs=61.4
Q ss_pred cccCCCcEEEeC-CC-ccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCC---CC-C-CCCC
Q 030558 5 EWIERRRCIELG-SG-TGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGD---AF-P-IPNP 77 (175)
Q Consensus 5 ~~~~~~~vLDlG-cG-~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~-~~~~ 77 (175)
...+|++||=.| +| .|..+..+++..|.+|+++|.+++.+ +.++.. +.. ..+.....+ .. . ....
T Consensus 137 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~-~~~~~~----Ga~---~~~~~~~~~~~~~~~~~~~~~ 208 (325)
T 3jyn_A 137 QVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKA-AHAKAL----GAW---ETIDYSHEDVAKRVLELTDGK 208 (325)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHH-HHHHHH----TCS---EEEETTTSCHHHHHHHHTTTC
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHc----CCC---EEEeCCCccHHHHHHHHhCCC
Confidence 455789999999 44 59999888887799999999998776 444321 110 111111100 00 0 1224
Q ss_pred CccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 78 DWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 78 ~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
.+|+|+-+..- ..++...++++++|+++..
T Consensus 209 g~Dvvid~~g~----------~~~~~~~~~l~~~G~iv~~ 238 (325)
T 3jyn_A 209 KCPVVYDGVGQ----------DTWLTSLDSVAPRGLVVSF 238 (325)
T ss_dssp CEEEEEESSCG----------GGHHHHHTTEEEEEEEEEC
T ss_pred CceEEEECCCh----------HHHHHHHHHhcCCCEEEEE
Confidence 79999875331 3566788999999988887
No 335
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=96.28 E-value=0.0014 Score=49.09 Aligned_cols=96 Identities=11% Similarity=0.007 Sum_probs=62.0
Q ss_pred cccCCCcEEEeCC--CccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCC---CC-CCCCCC
Q 030558 5 EWIERRRCIELGS--GTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGD---AF-PIPNPD 78 (175)
Q Consensus 5 ~~~~~~~vLDlGc--G~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~ 78 (175)
...+|++||=.|+ |.|..+..+++..|.+|+++|.+++.+ +.+.+. .+.. ..+.....+ .. ....+.
T Consensus 146 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~-~~~~~~---~g~~---~~~~~~~~~~~~~~~~~~~~~ 218 (336)
T 4b7c_A 146 QPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKC-RFLVEE---LGFD---GAIDYKNEDLAAGLKRECPKG 218 (336)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHHT---TCCS---EEEETTTSCHHHHHHHHCTTC
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHH---cCCC---EEEECCCHHHHHHHHHhcCCC
Confidence 4557899999998 458888888888899999999998765 443211 1220 111111100 00 011346
Q ss_pred ccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 79 WDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 79 fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
+|+++-+..- ..++...++++++|+++..
T Consensus 219 ~d~vi~~~g~----------~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 219 IDVFFDNVGG----------EILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp EEEEEESSCH----------HHHHHHHTTEEEEEEEEEC
T ss_pred ceEEEECCCc----------chHHHHHHHHhhCCEEEEE
Confidence 9998874321 4678889999999988876
No 336
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=96.25 E-value=0.0069 Score=45.91 Aligned_cols=93 Identities=11% Similarity=0.156 Sum_probs=60.7
Q ss_pred CCCcEEEeC-CC-ccHHHHHHHHh-CCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeec--cCCCC-CCCCCCCccE
Q 030558 8 ERRRCIELG-SG-TGALAIFLRKA-MNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKH--SWGDA-FPIPNPDWDL 81 (175)
Q Consensus 8 ~~~~vLDlG-cG-~G~~~~~l~~~-~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~fD~ 81 (175)
+|.+||=.| +| .|..+..+++. .+.+|+++|.+++.+ +.++. .+.. ..+.. ++.+. .....+.+|+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~-~~~~~----lGad---~vi~~~~~~~~~v~~~~~~g~Dv 242 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQ-EWVKS----LGAH---HVIDHSKPLAAEVAALGLGAPAF 242 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHH-HHHHH----TTCS---EEECTTSCHHHHHHTTCSCCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHH-HHHHH----cCCC---EEEeCCCCHHHHHHHhcCCCceE
Confidence 678899998 66 49999999987 588999999998775 44432 1220 01110 00000 1122357999
Q ss_pred EEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 82 ILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 82 i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
|+-... .+ ..++...++++|+|+++..
T Consensus 243 vid~~g------~~---~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 243 VFSTTH------TD---KHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEECSC------HH---HHHHHHHHHSCTTCEEEEC
T ss_pred EEECCC------ch---hhHHHHHHHhcCCCEEEEE
Confidence 887422 11 5778899999999998876
No 337
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=96.25 E-value=0.0022 Score=47.56 Aligned_cols=89 Identities=10% Similarity=0.072 Sum_probs=57.8
Q ss_pred cccCCCcEEEeCCCc-cHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEE
Q 030558 5 EWIERRRCIELGSGT-GALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLIL 83 (175)
Q Consensus 5 ~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~ 83 (175)
...+|.+||=+|+|. |..+..+++..|.+|+++| +++.+ +.+++.... ..+. + .+.+ .+.+|+|+
T Consensus 139 ~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~-~~~~~lGa~-------~v~~-d-~~~v---~~g~Dvv~ 204 (315)
T 3goh_A 139 PLTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQ-ALAAKRGVR-------HLYR-E-PSQV---TQKYFAIF 204 (315)
T ss_dssp CCCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCH-HHHHHHTEE-------EEES-S-GGGC---CSCEEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhH-HHHHHcCCC-------EEEc-C-HHHh---CCCccEEE
Confidence 456789999999974 9999999998899999999 88765 444432111 0111 1 1111 45799998
Q ss_pred eCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 84 ASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 84 ~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
-.-.- ..+....++++|+|+++..
T Consensus 205 d~~g~----------~~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 205 DAVNS----------QNAAALVPSLKANGHIICI 228 (315)
T ss_dssp CC-----------------TTGGGEEEEEEEEEE
T ss_pred ECCCc----------hhHHHHHHHhcCCCEEEEE
Confidence 64221 2235678899999988876
No 338
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=96.23 E-value=0.034 Score=42.68 Aligned_cols=100 Identities=12% Similarity=0.020 Sum_probs=58.8
Q ss_pred cccCCCcEEEeCCCc-cHHHHHHHHhCCC-cEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCC---CC-C-CCCC
Q 030558 5 EWIERRRCIELGSGT-GALAIFLRKAMNL-DITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGD---AF-P-IPNP 77 (175)
Q Consensus 5 ~~~~~~~vLDlGcG~-G~~~~~l~~~~~~-~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~-~~~~ 77 (175)
...+|.+||=+|+|. |..+..+++..|. +|+++|.++..+ +.+++.. .. ..+.....+ .. . ....
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~~~~lG----a~---~vi~~~~~~~~~~i~~~t~g~ 281 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRR-NLAKELG----AD---HVIDPTKENFVEAVLDYTNGL 281 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHH-HHHHHHT----CS---EEECTTTSCHHHHHHHHTTTC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHcC----CC---EEEcCCCCCHHHHHHHHhCCC
Confidence 456789999999975 8888999998888 899999999775 4444321 10 011110000 00 0 1123
Q ss_pred CccEEEeCCcccCcccch-HHHHHHHHHHhhcCCCCceeec
Q 030558 78 DWDLILASDILLYVKQYS-NLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 78 ~fD~i~~~~~l~~~~~~~-~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
.+|+|+-.-.- .. ....+++-+.++++++|++++.
T Consensus 282 g~D~vid~~g~-----~~~~~~~~~~~l~~~~~~~G~iv~~ 317 (404)
T 3ip1_A 282 GAKLFLEATGV-----PQLVWPQIEEVIWRARGINATVAIV 317 (404)
T ss_dssp CCSEEEECSSC-----HHHHHHHHHHHHHHCSCCCCEEEEC
T ss_pred CCCEEEECCCC-----cHHHHHHHHHHHHhccCCCcEEEEe
Confidence 69999864321 11 1112233333444999988886
No 339
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=96.19 E-value=0.0069 Score=45.42 Aligned_cols=90 Identities=13% Similarity=0.084 Sum_probs=58.8
Q ss_pred CCCcEEEeCCCc-cHHHHHHHHhCCC-cEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCC-CC-----CCCCCCc
Q 030558 8 ERRRCIELGSGT-GALAIFLRKAMNL-DITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGD-AF-----PIPNPDW 79 (175)
Q Consensus 8 ~~~~vLDlGcG~-G~~~~~l~~~~~~-~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~f 79 (175)
+|.+||=+|+|. |..+..+++..|. +|+++|.+++.+ +.++.. . .. .++..+ .. ......+
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~-~~~~~l-----a----~~-v~~~~~~~~~~~~~~~~~~g~ 232 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRL-AFARPY-----A----DR-LVNPLEEDLLEVVRRVTGSGV 232 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHH-GGGTTT-----C----SE-EECTTTSCHHHHHHHHHSSCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHh-----H----Hh-ccCcCccCHHHHHHHhcCCCC
Confidence 789999999874 8888888888888 899999988664 332211 1 00 111111 00 0012468
Q ss_pred cEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 80 DLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 80 D~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
|+|+-.-. .+ ..++...+.++++|+++..
T Consensus 233 D~vid~~g------~~---~~~~~~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 233 EVLLEFSG------NE---AAIHQGLMALIPGGEARIL 261 (343)
T ss_dssp EEEEECSC------CH---HHHHHHHHHEEEEEEEEEC
T ss_pred CEEEECCC------CH---HHHHHHHHHHhcCCEEEEE
Confidence 99986532 11 5678889999999988776
No 340
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=96.11 E-value=0.014 Score=43.75 Aligned_cols=96 Identities=11% Similarity=0.096 Sum_probs=62.6
Q ss_pred cccCCCcEEEeCCCc-cHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeecc--CCCCC-CC-CCCC
Q 030558 5 EWIERRRCIELGSGT-GALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHS--WGDAF-PI-PNPD 78 (175)
Q Consensus 5 ~~~~~~~vLDlGcG~-G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~-~~~~ 78 (175)
...+|.+||=+|+|. |..+..+++.. +.+|+++|.+++.+ +.++.. +.. ..+... +.+.. .. ....
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~-~~~~~l----Ga~---~~i~~~~~~~~~v~~~t~g~g 239 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRL-ALAREV----GAD---AAVKSGAGAADAIRELTGGQG 239 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHH-HHHHHT----TCS---EEEECSTTHHHHHHHHHGGGC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHH-HHHHHc----CCC---EEEcCCCcHHHHHHHHhCCCC
Confidence 456789999999985 88888888876 78999999999775 444321 220 111110 00000 00 1236
Q ss_pred ccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 79 WDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 79 fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
+|+|+-.-.- + ..++...++++++|++++.
T Consensus 240 ~d~v~d~~G~------~---~~~~~~~~~l~~~G~iv~~ 269 (345)
T 3jv7_A 240 ATAVFDFVGA------Q---STIDTAQQVVAVDGHISVV 269 (345)
T ss_dssp EEEEEESSCC------H---HHHHHHHHHEEEEEEEEEC
T ss_pred CeEEEECCCC------H---HHHHHHHHHHhcCCEEEEE
Confidence 8998875321 1 5788899999999998876
No 341
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=96.10 E-value=0.0027 Score=47.96 Aligned_cols=96 Identities=15% Similarity=0.074 Sum_probs=61.1
Q ss_pred ccccCCCcEEEeC-CC-ccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCC---CC-CCCCC
Q 030558 4 REWIERRRCIELG-SG-TGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGD---AF-PIPNP 77 (175)
Q Consensus 4 ~~~~~~~~vLDlG-cG-~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~ 77 (175)
....+|++||=.| +| .|..+..+++..|.+|+++|.+++.+ +.++.. +.. ..+.....+ .. ....+
T Consensus 163 ~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~-~~~~~l----Ga~---~~~~~~~~~~~~~~~~~~~~ 234 (353)
T 4dup_A 163 AGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKC-EACERL----GAK---RGINYRSEDFAAVIKAETGQ 234 (353)
T ss_dssp TCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHHH----TCS---EEEETTTSCHHHHHHHHHSS
T ss_pred cCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHhc----CCC---EEEeCCchHHHHHHHHHhCC
Confidence 3456789999994 44 58888888888899999999999776 444331 110 111111100 00 00134
Q ss_pred CccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 78 DWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 78 ~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
.+|+|+-+..- ..++...++++++|+++..
T Consensus 235 g~Dvvid~~g~----------~~~~~~~~~l~~~G~iv~~ 264 (353)
T 4dup_A 235 GVDIILDMIGA----------AYFERNIASLAKDGCLSII 264 (353)
T ss_dssp CEEEEEESCCG----------GGHHHHHHTEEEEEEEEEC
T ss_pred CceEEEECCCH----------HHHHHHHHHhccCCEEEEE
Confidence 69999875432 2467788899999988776
No 342
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=96.03 E-value=0.0076 Score=44.91 Aligned_cols=95 Identities=16% Similarity=0.209 Sum_probs=59.0
Q ss_pred cCCC-cEEEeCC-C-ccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCC-CCCCCCCccEE
Q 030558 7 IERR-RCIELGS-G-TGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDA-FPIPNPDWDLI 82 (175)
Q Consensus 7 ~~~~-~vLDlGc-G-~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~fD~i 82 (175)
.++. +||=.|+ | .|..+..+++..|.+|++++.+++.+ +.++.. +....+.....+ .+. .....+.+|+|
T Consensus 148 ~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~-~~~~~l----Ga~~v~~~~~~~-~~~~~~~~~~~~d~v 221 (330)
T 1tt7_A 148 SPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAA-DYLKQL----GASEVISREDVY-DGTLKALSKQQWQGA 221 (330)
T ss_dssp CGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTH-HHHHHH----TCSEEEEHHHHC-SSCCCSSCCCCEEEE
T ss_pred CCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHc----CCcEEEECCCch-HHHHHHhhcCCccEE
Confidence 3454 8999997 5 59988888888789999999988665 444321 110000000000 111 11223468998
Q ss_pred EeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 83 LASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 83 ~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
+-+-. . ..++...++++++|+++..
T Consensus 222 id~~g-----~-----~~~~~~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 222 VDPVG-----G-----KQLASLLSKIQYGGSVAVS 246 (330)
T ss_dssp EESCC-----T-----HHHHHHHTTEEEEEEEEEC
T ss_pred EECCc-----H-----HHHHHHHHhhcCCCEEEEE
Confidence 86532 1 3577889999999988776
No 343
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=96.03 E-value=0.0087 Score=45.62 Aligned_cols=95 Identities=12% Similarity=0.099 Sum_probs=61.2
Q ss_pred ccCCCcEEEeCCCc-cHHHHHHHHhCC-CcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeecc------CCCCC-CC-C
Q 030558 6 WIERRRCIELGSGT-GALAIFLRKAMN-LDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHS------WGDAF-PI-P 75 (175)
Q Consensus 6 ~~~~~~vLDlGcG~-G~~~~~l~~~~~-~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~------~~~~~-~~-~ 75 (175)
..+|.+||=+|+|. |..+..+++..| .+|+++|.+++.+ +.++. .+.. ..+... +.+.. .. .
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~~~~----lGa~---~vi~~~~~~~~~~~~~v~~~~~ 264 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRL-KLAEE----IGAD---LTLNRRETSVEERRKAIMDITH 264 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHH-HHHHH----TTCS---EEEETTTSCHHHHHHHHHHHTT
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHH-HHHHH----cCCc---EEEeccccCcchHHHHHHHHhC
Confidence 45689999999874 888899999888 6999999998775 44432 1220 111111 00000 11 1
Q ss_pred CCCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 76 NPDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 76 ~~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
...+|+|+-.-.- + ..++...++++++|+++..
T Consensus 265 g~g~Dvvid~~g~------~---~~~~~~~~~l~~~G~iv~~ 297 (380)
T 1vj0_A 265 GRGADFILEATGD------S---RALLEGSELLRRGGFYSVA 297 (380)
T ss_dssp TSCEEEEEECSSC------T---THHHHHHHHEEEEEEEEEC
T ss_pred CCCCcEEEECCCC------H---HHHHHHHHHHhcCCEEEEE
Confidence 2369999865331 1 4567788999999988776
No 344
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=96.00 E-value=0.0065 Score=45.56 Aligned_cols=42 Identities=14% Similarity=0.077 Sum_probs=35.6
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhC--CCcEEEEeCChHHHHHHH
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAM--NLDITTSDYNDQEIEDNI 48 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~~~D~s~~~l~~~~ 48 (175)
..+|..++|..||.|..+..+++.. ..+|+|+|.++.++ +.+
T Consensus 55 i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al-~~A 98 (347)
T 3tka_A 55 IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAI-AVA 98 (347)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHH-HHH
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHH-HHH
Confidence 4568899999999999999998875 35799999999998 444
No 345
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=95.98 E-value=0.0056 Score=46.02 Aligned_cols=96 Identities=21% Similarity=0.261 Sum_probs=61.4
Q ss_pred cccCCCcEEEeCCC--ccHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCC---C-CCCC-
Q 030558 5 EWIERRRCIELGSG--TGALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDA---F-PIPN- 76 (175)
Q Consensus 5 ~~~~~~~vLDlGcG--~G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~- 76 (175)
...++++||-.|+| .|..+..+++.. |.+|+++|.+++.+ +.++.. +.. ..+.....+. . ....
T Consensus 167 ~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~-~~~~~~----g~~---~~~~~~~~~~~~~~~~~~~~ 238 (347)
T 1jvb_A 167 SLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAV-EAAKRA----GAD---YVINASMQDPLAEIRRITES 238 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHH-HHHHHH----TCS---EEEETTTSCHHHHHHHHTTT
T ss_pred CCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHH-HHHHHh----CCC---EEecCCCccHHHHHHHHhcC
Confidence 34578999999997 577888888877 88999999998775 444321 110 0111110010 0 1111
Q ss_pred CCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 77 PDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 77 ~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
+.+|+++.+..- + ..++...+.++|+|+++..
T Consensus 239 ~~~d~vi~~~g~------~---~~~~~~~~~l~~~G~iv~~ 270 (347)
T 1jvb_A 239 KGVDAVIDLNNS------E---KTLSVYPKALAKQGKYVMV 270 (347)
T ss_dssp SCEEEEEESCCC------H---HHHTTGGGGEEEEEEEEEC
T ss_pred CCceEEEECCCC------H---HHHHHHHHHHhcCCEEEEE
Confidence 479999875332 1 4677888999999988775
No 346
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.96 E-value=0.013 Score=43.74 Aligned_cols=46 Identities=4% Similarity=0.092 Sum_probs=37.2
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhh
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTT 54 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~ 54 (175)
.+|..|||.-||+|..+..+.+. +.+.+++|+++..+ +.++.++..
T Consensus 251 ~~~~~VlDpF~GsGtt~~aa~~~-gr~~ig~e~~~~~~-~~~~~r~~~ 296 (323)
T 1boo_A 251 EPDDLVVDIFGGSNTTGLVAERE-SRKWISFEMKPEYV-AASAFRFLD 296 (323)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHT-TCEEEEEESCHHHH-HHHHGGGSC
T ss_pred CCCCEEEECCCCCCHHHHHHHHc-CCCEEEEeCCHHHH-HHHHHHHHh
Confidence 46889999999999988887555 99999999999886 555555443
No 347
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=95.90 E-value=0.013 Score=43.91 Aligned_cols=93 Identities=8% Similarity=0.039 Sum_probs=61.3
Q ss_pred cccCCCcEEEeCC--CccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCC-----C-C-CC
Q 030558 5 EWIERRRCIELGS--GTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDA-----F-P-IP 75 (175)
Q Consensus 5 ~~~~~~~vLDlGc--G~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~-~~ 75 (175)
...++++||-.|+ |.|..+..+++..+.+|+++|.+++.+ +.++.. +. .. .++..+. . . ..
T Consensus 163 ~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~-~~~~~~----ga----~~-~~d~~~~~~~~~~~~~~~ 232 (343)
T 2eih_A 163 GVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKL-RRAKAL----GA----DE-TVNYTHPDWPKEVRRLTG 232 (343)
T ss_dssp CCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHH-HHHHHH----TC----SE-EEETTSTTHHHHHHHHTT
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHhc----CC----CE-EEcCCcccHHHHHHHHhC
Confidence 4557899999998 569999888888889999999998776 444321 11 01 1111110 0 0 11
Q ss_pred CCCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 76 NPDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 76 ~~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
...+|+|+.+.. . ..++.+.+.++++|+++..
T Consensus 233 ~~~~d~vi~~~g----~------~~~~~~~~~l~~~G~~v~~ 264 (343)
T 2eih_A 233 GKGADKVVDHTG----A------LYFEGVIKATANGGRIAIA 264 (343)
T ss_dssp TTCEEEEEESSC----S------SSHHHHHHHEEEEEEEEES
T ss_pred CCCceEEEECCC----H------HHHHHHHHhhccCCEEEEE
Confidence 247999987533 1 3467788899999988776
No 348
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=95.89 E-value=0.01 Score=44.78 Aligned_cols=44 Identities=27% Similarity=0.309 Sum_probs=35.5
Q ss_pred CCcEEEeCCCccHHHHHHHHhC--CCcEEEEeCChHHHHHHHHHHHh
Q 030558 9 RRRCIELGSGTGALAIFLRKAM--NLDITTSDYNDQEIEDNIAYNST 53 (175)
Q Consensus 9 ~~~vLDlGcG~G~~~~~l~~~~--~~~v~~~D~s~~~l~~~~~~~~~ 53 (175)
..+++|+-||.|.+++.+.+.+ ...|+++|+++.++ +..+.|..
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~-~~~~~N~~ 47 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVAN-EVYKYNFP 47 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHH-HHHHHHCT
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHH-HHHHHhcc
Confidence 3579999999999999998874 23599999999887 66666653
No 349
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=95.87 E-value=0.0041 Score=46.72 Aligned_cols=95 Identities=13% Similarity=0.168 Sum_probs=61.6
Q ss_pred cccCCCcEEEeCC-C-ccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeecc--CCCCC-C-CCCCC
Q 030558 5 EWIERRRCIELGS-G-TGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHS--WGDAF-P-IPNPD 78 (175)
Q Consensus 5 ~~~~~~~vLDlGc-G-~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~-~~~~~ 78 (175)
...+|++||=.|+ | .|..+..+++..|.+|+++|.+++.+ +.++.. +.. ..+... +.+.. . .....
T Consensus 156 ~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~-~~~~~~----ga~---~v~~~~~~~~~~v~~~~~~~g 227 (342)
T 4eye_A 156 QLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAAT-EFVKSV----GAD---IVLPLEEGWAKAVREATGGAG 227 (342)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGH-HHHHHH----TCS---EEEESSTTHHHHHHHHTTTSC
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHhc----CCc---EEecCchhHHHHHHHHhCCCC
Confidence 4557899999997 4 59999999998899999999998775 444432 110 111111 00000 1 11236
Q ss_pred ccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 79 WDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 79 fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
+|+|+-+..- ..++...++++++|+++..
T Consensus 228 ~Dvvid~~g~----------~~~~~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 228 VDMVVDPIGG----------PAFDDAVRTLASEGRLLVV 256 (342)
T ss_dssp EEEEEESCC------------CHHHHHHTEEEEEEEEEC
T ss_pred ceEEEECCch----------hHHHHHHHhhcCCCEEEEE
Confidence 9999875332 2467788999999988876
No 350
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=95.85 E-value=0.066 Score=40.80 Aligned_cols=98 Identities=18% Similarity=0.103 Sum_probs=66.2
Q ss_pred CCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCCc
Q 030558 8 ERRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASDI 87 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~~ 87 (175)
.+++||.++.+.|.++..++.. .++.+.-|--. +..++.|.+.+++... .+ .+.+........||+|+..
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~---~~~~~~ds~~~-~~~~~~n~~~~~~~~~--~~--~~~~~~~~~~~~~~~v~~~-- 107 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH---KPYSIGDSYIS-ELATRENLRLNGIDES--SV--KFLDSTADYPQQPGVVLIK-- 107 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG---CCEEEESCHHH-HHHHHHHHHHTTCCGG--GS--EEEETTSCCCSSCSEEEEE--
T ss_pred CCCCEEEECCCCCHHHHhhccC---CceEEEhHHHH-HHHHHHHHHHcCCCcc--ce--EecccccccccCCCEEEEE--
Confidence 4578999999999999888643 44554223323 3667788888877321 11 1112333345679998883
Q ss_pred ccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 88 LLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 88 l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
.......+...+..+...++||+++++.
T Consensus 108 --lpk~~~~l~~~L~~l~~~l~~~~~i~~~ 135 (375)
T 4dcm_A 108 --VPKTLALLEQQLRALRKVVTSDTRIIAG 135 (375)
T ss_dssp --CCSCHHHHHHHHHHHHTTCCTTSEEEEE
T ss_pred --cCCCHHHHHHHHHHHHhhCCCCCEEEEE
Confidence 3355667788999999999999988665
No 351
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=95.85 E-value=0.016 Score=43.69 Aligned_cols=94 Identities=15% Similarity=0.075 Sum_probs=60.6
Q ss_pred cccCCCcEEEeCC--CccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCC------C-CC
Q 030558 5 EWIERRRCIELGS--GTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAF------P-IP 75 (175)
Q Consensus 5 ~~~~~~~vLDlGc--G~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-~~ 75 (175)
...++++||=.|+ |.|..+..+++..|.+|+++|.+++.+ +.++. .+. .. .++..+.. . ..
T Consensus 167 ~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~-~~~~~----~ga----~~-~~d~~~~~~~~~~~~~~~ 236 (351)
T 1yb5_A 167 CVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQ-KIVLQ----NGA----HE-VFNHREVNYIDKIKKYVG 236 (351)
T ss_dssp CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHH----TTC----SE-EEETTSTTHHHHHHHHHC
T ss_pred CCCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHH-HHHHH----cCC----CE-EEeCCCchHHHHHHHHcC
Confidence 4557899999997 458888888887789999999998775 33322 122 11 11111100 0 11
Q ss_pred CCCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeecc
Q 030558 76 NPDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHL 118 (175)
Q Consensus 76 ~~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~ 118 (175)
...+|+++.+..- ..+....++++++|+++..-
T Consensus 237 ~~~~D~vi~~~G~----------~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 237 EKGIDIIIEMLAN----------VNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp TTCEEEEEESCHH----------HHHHHHHHHEEEEEEEEECC
T ss_pred CCCcEEEEECCCh----------HHHHHHHHhccCCCEEEEEe
Confidence 2368999875321 35677889999999887763
No 352
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=95.83 E-value=0.0062 Score=46.11 Aligned_cols=94 Identities=14% Similarity=0.100 Sum_probs=60.9
Q ss_pred ccCCCcEEEeC-C-CccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCC---CC-CCCCCCc
Q 030558 6 WIERRRCIELG-S-GTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGD---AF-PIPNPDW 79 (175)
Q Consensus 6 ~~~~~~vLDlG-c-G~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~f 79 (175)
..+|++||=.| + |.|..+..+++..|.+|+++|.+++.+ +.++. .+.. ..+.....+ .. ......+
T Consensus 161 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~-~~~~~----~Ga~---~~~~~~~~~~~~~~~~~~~~g~ 232 (362)
T 2c0c_A 161 LSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKS-AFLKS----LGCD---RPINYKTEPVGTVLKQEYPEGV 232 (362)
T ss_dssp CCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHH-HHHHH----TTCS---EEEETTTSCHHHHHHHHCTTCE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHH-HHHHH----cCCc---EEEecCChhHHHHHHHhcCCCC
Confidence 45689999999 4 469999999888889999999998765 44432 1220 011111000 00 0112468
Q ss_pred cEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 80 DLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 80 D~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
|+|+-+..- ..++.+.++++++|+++..
T Consensus 233 D~vid~~g~----------~~~~~~~~~l~~~G~iv~~ 260 (362)
T 2c0c_A 233 DVVYESVGG----------AMFDLAVDALATKGRLIVI 260 (362)
T ss_dssp EEEEECSCT----------HHHHHHHHHEEEEEEEEEC
T ss_pred CEEEECCCH----------HHHHHHHHHHhcCCEEEEE
Confidence 999875331 4677889999999988776
No 353
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.71 E-value=0.014 Score=43.38 Aligned_cols=93 Identities=12% Similarity=0.058 Sum_probs=59.8
Q ss_pred cccCCCcEEEeCC--CccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCC------C-CC
Q 030558 5 EWIERRRCIELGS--GTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAF------P-IP 75 (175)
Q Consensus 5 ~~~~~~~vLDlGc--G~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-~~ 75 (175)
...++++||-.|+ |.|.....+++..|.+|+++|.+++.+ +.++.. +. .. .++..+.. . ..
T Consensus 137 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~-~~~~~~----g~----~~-~~~~~~~~~~~~~~~~~~ 206 (327)
T 1qor_A 137 EIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKA-QSALKA----GA----WQ-VINYREEDLVERLKEITG 206 (327)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHH-HHHHHH----TC----SE-EEETTTSCHHHHHHHHTT
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHc----CC----CE-EEECCCccHHHHHHHHhC
Confidence 4557899999993 468888887777788999999998765 444321 11 00 11111100 0 11
Q ss_pred CCCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 76 NPDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 76 ~~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
...+|+++.+.. . ..++...++++++|+++..
T Consensus 207 ~~~~D~vi~~~g-------~---~~~~~~~~~l~~~G~iv~~ 238 (327)
T 1qor_A 207 GKKVRVVYDSVG-------R---DTWERSLDCLQRRGLMVSF 238 (327)
T ss_dssp TCCEEEEEECSC-------G---GGHHHHHHTEEEEEEEEEC
T ss_pred CCCceEEEECCc-------h---HHHHHHHHHhcCCCEEEEE
Confidence 236899987532 1 4567888999999988776
No 354
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=95.70 E-value=0.0061 Score=45.80 Aligned_cols=94 Identities=12% Similarity=0.100 Sum_probs=61.4
Q ss_pred cccCCCcEEEeCC--CccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCC-------CC
Q 030558 5 EWIERRRCIELGS--GTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFP-------IP 75 (175)
Q Consensus 5 ~~~~~~~vLDlGc--G~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 75 (175)
...+|++||-.|+ |.|..+..+++..|.+|+++|.+++.+ +.++. .+. . ..++..+... ..
T Consensus 166 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~-~~~~~----~g~----~-~~~d~~~~~~~~~~~~~~~ 235 (347)
T 2hcy_A 166 NLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKE-ELFRS----IGG----E-VFIDFTKEKDIVGAVLKAT 235 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHH-HHHHH----TTC----C-EEEETTTCSCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHH-HHHHH----cCC----c-eEEecCccHhHHHHHHHHh
Confidence 3457899999998 468888888887788999999988765 44332 122 1 1112111100 01
Q ss_pred CCCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 76 NPDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 76 ~~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
.+.+|+++.+... . ..++.+.+.++++|+++..
T Consensus 236 ~~~~D~vi~~~g~------~---~~~~~~~~~l~~~G~iv~~ 268 (347)
T 2hcy_A 236 DGGAHGVINVSVS------E---AAIEASTRYVRANGTTVLV 268 (347)
T ss_dssp TSCEEEEEECSSC------H---HHHHHHTTSEEEEEEEEEC
T ss_pred CCCCCEEEECCCc------H---HHHHHHHHHHhcCCEEEEE
Confidence 1268998876432 1 5678889999999988776
No 355
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=95.58 E-value=0.097 Score=39.26 Aligned_cols=106 Identities=10% Similarity=0.144 Sum_probs=64.5
Q ss_pred CCCcEEEeCCCccHHHHHHHHh-CCCcEEEEeCChHHHHHHHHHHHhhCC--------------------CCCCcceeec
Q 030558 8 ERRRCIELGSGTGALAIFLRKA-MNLDITTSDYNDQEIEDNIAYNSTTNG--------------------ITPALPHIKH 66 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~~D~s~~~l~~~~~~~~~~~~--------------------~~~~~~~~~~ 66 (175)
+.+.|+.||||.......+... .+..++=+|. |.++ +.-++.+...+ ...+...+..
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi-~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~ 174 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESV-ELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAAC 174 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHH-HHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEEC
T ss_pred CCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHH-HHHHHHhhhccchhhhcccccccccccccccCCCceEEEec
Confidence 3467999999999999888664 2445666666 4454 33333332220 0123444444
Q ss_pred cCCCC------C-CC-CCCCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 67 SWGDA------F-PI-PNPDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 67 ~~~~~------~-~~-~~~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
+..+. + .. ..+...++++-.+++|.. .+...++++.+.+.. |+|.+++.
T Consensus 175 DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~-~~~~~~ll~~ia~~~-~~~~~v~~ 231 (334)
T 1rjd_A 175 DLNDITETTRLLDVCTKREIPTIVISECLLCYMH-NNESQLLINTIMSKF-SHGLWISY 231 (334)
T ss_dssp CTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSC-HHHHHHHHHHHHHHC-SSEEEEEE
T ss_pred CCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCC-HHHHHHHHHHHHhhC-CCcEEEEE
Confidence 44331 0 11 234678899888886665 667888899888876 67766544
No 356
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=95.58 E-value=0.0081 Score=44.71 Aligned_cols=93 Identities=15% Similarity=0.193 Sum_probs=57.8
Q ss_pred cCCC-cEEEeCC-C-ccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCC--CC-CCCCCCCcc
Q 030558 7 IERR-RCIELGS-G-TGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWG--DA-FPIPNPDWD 80 (175)
Q Consensus 7 ~~~~-~vLDlGc-G-~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~fD 80 (175)
.++. +||=.|+ | .|..+..+++..|.+|++++.+++.+ +.++. .+.. ..+..... +. .....+.+|
T Consensus 147 ~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~-~~~~~----lGa~---~~i~~~~~~~~~~~~~~~~~~d 218 (328)
T 1xa0_A 147 TPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEH-DYLRV----LGAK---EVLAREDVMAERIRPLDKQRWA 218 (328)
T ss_dssp CGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCH-HHHHH----TTCS---EEEECC---------CCSCCEE
T ss_pred CCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHH----cCCc---EEEecCCcHHHHHHHhcCCccc
Confidence 3454 8999997 4 59999999998899999999988665 44432 1220 01111100 11 112234689
Q ss_pred EEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 81 LILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 81 ~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
+|+-+-.- ..++...++++++|+++..
T Consensus 219 ~vid~~g~----------~~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 219 AAVDPVGG----------RTLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp EEEECSTT----------TTHHHHHHTEEEEEEEEEC
T ss_pred EEEECCcH----------HHHHHHHHhhccCCEEEEE
Confidence 98865321 2466788899999988776
No 357
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=95.58 E-value=0.023 Score=42.82 Aligned_cols=95 Identities=13% Similarity=-0.020 Sum_probs=59.7
Q ss_pred cccCCCcEEEeCC--CccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCC---CC-C-CCCC
Q 030558 5 EWIERRRCIELGS--GTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGD---AF-P-IPNP 77 (175)
Q Consensus 5 ~~~~~~~vLDlGc--G~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~-~~~~ 77 (175)
...+|++||=.|+ |.|..+..+++..|.+|+++|.+++.+ +.++.. +.. ..+.....+ .. . ....
T Consensus 159 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~-~~~~~~----g~~---~~~~~~~~~~~~~~~~~~~~~ 230 (354)
T 2j8z_A 159 NVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKL-QMAEKL----GAA---AGFNYKKEDFSEATLKFTKGA 230 (354)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHH----TCS---EEEETTTSCHHHHHHHHTTTS
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHc----CCc---EEEecCChHHHHHHHHHhcCC
Confidence 4557899999983 468888888887789999999998776 444321 110 011111100 00 0 1123
Q ss_pred CccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 78 DWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 78 ~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
.+|+++-+..- ..++...++++++|+++..
T Consensus 231 ~~d~vi~~~G~----------~~~~~~~~~l~~~G~iv~~ 260 (354)
T 2j8z_A 231 GVNLILDCIGG----------SYWEKNVNCLALDGRWVLY 260 (354)
T ss_dssp CEEEEEESSCG----------GGHHHHHHHEEEEEEEEEC
T ss_pred CceEEEECCCc----------hHHHHHHHhccCCCEEEEE
Confidence 69999876432 2356678899999988776
No 358
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=95.56 E-value=0.0029 Score=46.62 Aligned_cols=89 Identities=16% Similarity=0.102 Sum_probs=58.9
Q ss_pred ccCCCcEEEeCC-C-ccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeecc----CCCCCCCCCCCc
Q 030558 6 WIERRRCIELGS-G-TGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHS----WGDAFPIPNPDW 79 (175)
Q Consensus 6 ~~~~~~vLDlGc-G-~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~f 79 (175)
..+|++||=+|+ | .|..+..+++..|.+|+++|.+++.+ +.++. .+.. ..+... +.+.. +.+
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~-~~~~~----~ga~---~~~~~~~~~~~~~~~----~~~ 190 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKL-ALPLA----LGAE---EAATYAEVPERAKAW----GGL 190 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGS-HHHHH----TTCS---EEEEGGGHHHHHHHT----TSE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHh----cCCC---EEEECCcchhHHHHh----cCc
Confidence 456899999997 4 58888888888889999999988765 44332 1220 111110 10111 468
Q ss_pred cEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 80 DLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 80 D~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
|+|+- ..- ..++...++++++|+++..
T Consensus 191 d~vid-~g~----------~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 191 DLVLE-VRG----------KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp EEEEE-CSC----------TTHHHHHTTEEEEEEEEEC
T ss_pred eEEEE-CCH----------HHHHHHHHhhccCCEEEEE
Confidence 99886 321 2467788999999988775
No 359
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=95.51 E-value=0.027 Score=41.98 Aligned_cols=93 Identities=10% Similarity=0.103 Sum_probs=60.2
Q ss_pred cccCCCcEEEeCC--CccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCC------C-CC
Q 030558 5 EWIERRRCIELGS--GTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAF------P-IP 75 (175)
Q Consensus 5 ~~~~~~~vLDlGc--G~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-~~ 75 (175)
...++++||=.|+ |.|.....+++..|.+|+++|.+++.+ +.++.. +. .. .++..+.. . ..
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~-~~~~~~----g~----~~-~~d~~~~~~~~~i~~~~~ 211 (333)
T 1wly_A 142 KVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKA-ETARKL----GC----HH-TINYSTQDFAEVVREITG 211 (333)
T ss_dssp CCCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHH-HHHHHH----TC----SE-EEETTTSCHHHHHHHHHT
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHc----CC----CE-EEECCCHHHHHHHHHHhC
Confidence 4557899999995 568888888887789999999998765 444321 11 00 11111100 0 01
Q ss_pred CCCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 76 NPDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 76 ~~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
...+|+++.+..- ..++...++++++|+++..
T Consensus 212 ~~~~d~vi~~~g~----------~~~~~~~~~l~~~G~iv~~ 243 (333)
T 1wly_A 212 GKGVDVVYDSIGK----------DTLQKSLDCLRPRGMCAAY 243 (333)
T ss_dssp TCCEEEEEECSCT----------TTHHHHHHTEEEEEEEEEC
T ss_pred CCCCeEEEECCcH----------HHHHHHHHhhccCCEEEEE
Confidence 2368999875331 3467788999999988776
No 360
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=95.50 E-value=0.0085 Score=45.01 Aligned_cols=91 Identities=15% Similarity=0.198 Sum_probs=59.8
Q ss_pred CCCcEEEe-CCC-ccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCC-----CCCCCCcc
Q 030558 8 ERRRCIEL-GSG-TGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAF-----PIPNPDWD 80 (175)
Q Consensus 8 ~~~~vLDl-GcG-~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~fD 80 (175)
+|++||=. |+| .|..+..+++..|.+|+++|.+++.+ +.++.. +. ..+ ++..++. ....+.+|
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~-~~~~~l----Ga----~~v-i~~~~~~~~~~~~~~~~g~D 219 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETI-EWTKKM----GA----DIV-LNHKESLLNQFKTQGIELVD 219 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHH-HHHHHH----TC----SEE-ECTTSCHHHHHHHHTCCCEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHhc----CC----cEE-EECCccHHHHHHHhCCCCcc
Confidence 78899999 566 48889999998899999999988775 444432 11 000 1111100 11234699
Q ss_pred EEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 81 LILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 81 ~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
+|+-... .+ ..++...++++++|+++..
T Consensus 220 vv~d~~g------~~---~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 220 YVFCTFN------TD---MYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp EEEESSC------HH---HHHHHHHHHEEEEEEEEES
T ss_pred EEEECCC------ch---HHHHHHHHHhccCCEEEEE
Confidence 9887422 11 5678889999999998665
No 361
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=95.50 E-value=0.031 Score=43.61 Aligned_cols=95 Identities=11% Similarity=0.045 Sum_probs=61.5
Q ss_pred cccCCCcEEEeCC-C-ccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCC-----------
Q 030558 5 EWIERRRCIELGS-G-TGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDA----------- 71 (175)
Q Consensus 5 ~~~~~~~vLDlGc-G-~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 71 (175)
...+|.+||=+|+ | .|..+..+++..|.+|++++.+++.+ +.++.. +.. ..+.....+.
T Consensus 225 ~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~-~~~~~l----Ga~---~vi~~~~~d~~~~~~~~~~~~ 296 (456)
T 3krt_A 225 GMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKA-EICRAM----GAE---AIIDRNAEGYRFWKDENTQDP 296 (456)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHHH----TCC---EEEETTTTTCCSEEETTEECH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHH-HHHHhh----CCc---EEEecCcCcccccccccccch
Confidence 4567899999997 5 59999999998899999999888765 444321 110 0111100000
Q ss_pred ---------C-C-CCCCCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 72 ---------F-P-IPNPDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 72 ---------~-~-~~~~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
. . .....+|+|+-+-. . ..++...++++++|+++..
T Consensus 297 ~~~~~~~~~i~~~t~g~g~Dvvid~~G--------~--~~~~~~~~~l~~~G~iv~~ 343 (456)
T 3krt_A 297 KEWKRFGKRIRELTGGEDIDIVFEHPG--------R--ETFGASVFVTRKGGTITTC 343 (456)
T ss_dssp HHHHHHHHHHHHHHTSCCEEEEEECSC--------H--HHHHHHHHHEEEEEEEEES
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEcCC--------c--hhHHHHHHHhhCCcEEEEE
Confidence 0 0 01247899886422 1 4677888999999988876
No 362
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=95.49 E-value=0.026 Score=43.93 Aligned_cols=99 Identities=11% Similarity=0.034 Sum_probs=61.8
Q ss_pred ccccCCCcEEEeCC-C-ccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCC----------
Q 030558 4 REWIERRRCIELGS-G-TGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDA---------- 71 (175)
Q Consensus 4 ~~~~~~~~vLDlGc-G-~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 71 (175)
....+|++||=.|+ | .|..+..+++..|.+|++++.+++.+ +.++. .+....+.....++.+.
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~-~~~~~----lGa~~~i~~~~~~~~~~~~~~~~~~~~ 290 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKE-AAVRA----LGCDLVINRAELGITDDIADDPRRVVE 290 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHH----TTCCCEEEHHHHTCCTTGGGCHHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHh----cCCCEEEecccccccccccccccccch
Confidence 35567899999997 5 58899999998899999999888765 44332 12211011000010000
Q ss_pred --------C-CCCCCCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 72 --------F-PIPNPDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 72 --------~-~~~~~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
. ......+|+|+-+..- ..++...++++++|+++..
T Consensus 291 ~~~~~~~~v~~~~g~g~Dvvid~~G~----------~~~~~~~~~l~~~G~iv~~ 335 (447)
T 4a0s_A 291 TGRKLAKLVVEKAGREPDIVFEHTGR----------VTFGLSVIVARRGGTVVTC 335 (447)
T ss_dssp HHHHHHHHHHHHHSSCCSEEEECSCH----------HHHHHHHHHSCTTCEEEES
T ss_pred hhhHHHHHHHHHhCCCceEEEECCCc----------hHHHHHHHHHhcCCEEEEE
Confidence 0 0012468999875331 3567788899999988876
No 363
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=95.45 E-value=0.0033 Score=47.49 Aligned_cols=94 Identities=16% Similarity=0.123 Sum_probs=57.6
Q ss_pred CCCcEEEeCCCc-cHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCC
Q 030558 8 ERRRCIELGSGT-GALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASD 86 (175)
Q Consensus 8 ~~~~vLDlGcG~-G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~ 86 (175)
+|.+||=+|+|. |..+..+++..|.+|+++|.+++.+ +.+++ ..+.. ..+.....+......+.+|+|+-.-
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~-~~~~~---~lGa~---~vi~~~~~~~~~~~~~g~D~vid~~ 252 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKR-EEALQ---DLGAD---DYVIGSDQAKMSELADSLDYVIDTV 252 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHH-HHHHT---TSCCS---CEEETTCHHHHHHSTTTEEEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHH-HHHHH---HcCCc---eeeccccHHHHHHhcCCCCEEEECC
Confidence 788999999875 8888888887788999999988665 33321 11220 1111110000000113689998643
Q ss_pred cccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 87 ILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 87 ~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
.- . ..++...++++|+|+++..
T Consensus 253 g~---~------~~~~~~~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 253 PV---H------HALEPYLSLLKLDGKLILM 274 (357)
T ss_dssp CS---C------CCSHHHHTTEEEEEEEEEC
T ss_pred CC---h------HHHHHHHHHhccCCEEEEe
Confidence 21 1 2345677899999988775
No 364
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=95.43 E-value=0.024 Score=43.26 Aligned_cols=42 Identities=24% Similarity=0.180 Sum_probs=34.2
Q ss_pred CcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHH
Q 030558 10 RRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNS 52 (175)
Q Consensus 10 ~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~ 52 (175)
-+++||-||.|.+++-+.+.+...|.++|+++..+ +..+.|.
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~-~t~~~N~ 44 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAI-NTHAINF 44 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHH-HHHHHHC
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHH-HHHHHhC
Confidence 47999999999999999887433478999999886 6666654
No 365
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=95.39 E-value=0.028 Score=41.90 Aligned_cols=45 Identities=9% Similarity=0.011 Sum_probs=36.1
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhCCCcEEEEeCCh---HHHHHHHHHHHh
Q 030558 7 IERRRCIELGSGTGALAIFLRKAMNLDITTSDYND---QEIEDNIAYNST 53 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~---~~l~~~~~~~~~ 53 (175)
.+|..|||.-||+|..+..+.+. +.+.+++|+++ ..+ +.+..++.
T Consensus 241 ~~~~~vlDpF~GsGtt~~aa~~~-~r~~ig~e~~~~~~~~~-~~~~~Rl~ 288 (319)
T 1eg2_A 241 HPGSTVLDFFAGSGVTARVAIQE-GRNSICTDAAPVFKEYY-QKQLTFLQ 288 (319)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHH-TCEEEEEESSTHHHHHH-HHHHHHC-
T ss_pred CCCCEEEecCCCCCHHHHHHHHc-CCcEEEEECCccHHHHH-HHHHHHHH
Confidence 36889999999999999888666 89999999999 776 45444443
No 366
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=95.24 E-value=0.098 Score=42.88 Aligned_cols=127 Identities=13% Similarity=0.148 Sum_probs=70.8
Q ss_pred CcEEEeCCCccHHHHHHHHhC-------------CCcEEEEeC---ChHHHHHHHHH----------HHhhCCC-CCCcc
Q 030558 10 RRCIELGSGTGALAIFLRKAM-------------NLDITTSDY---NDQEIEDNIAY----------NSTTNGI-TPALP 62 (175)
Q Consensus 10 ~~vLDlGcG~G~~~~~l~~~~-------------~~~v~~~D~---s~~~l~~~~~~----------~~~~~~~-~~~~~ 62 (175)
-+|||+|-|+|...+...+.. ..++++++. +.+.+...++. -...... ...+.
T Consensus 68 ~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 147 (676)
T 3ps9_A 68 FVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCH 147 (676)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEEE
T ss_pred eEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCce
Confidence 479999999999997654432 135899999 77666323221 1111111 00110
Q ss_pred e---------eeccCCCC---CC-C---CCCCccEEEeCCcccCcccchHH--HHHHHHHHhhcCCCCceeeccccCCCC
Q 030558 63 H---------IKHSWGDA---FP-I---PNPDWDLILASDILLYVKQYSNL--IKSLSVLLKSYKPKDSQVGHLTKNEQG 124 (175)
Q Consensus 63 ~---------~~~~~~~~---~~-~---~~~~fD~i~~~~~l~~~~~~~~~--~~~l~~l~~~l~pgG~~~~~~~~~~~~ 124 (175)
. +.+..+|. ++ . ....||+++.-. + -....+++ ..+++.+.++++|||++... .
T Consensus 148 ~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~-f-~p~~np~~w~~~~~~~l~~~~~~g~~~~t~--~---- 219 (676)
T 3ps9_A 148 RLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDG-F-APAKNPDMWTQNLFNAMARLARPGGTLATF--T---- 219 (676)
T ss_dssp EEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECC-S-CGGGCGGGSCHHHHHHHHHHEEEEEEEEES--C----
T ss_pred EEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECC-C-CCcCChhhhhHHHHHHHHHHhCCCCEEEec--c----
Confidence 1 11112221 11 1 135799988732 1 11111111 38899999999999865541 1
Q ss_pred CCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCeeEEec
Q 030558 125 EGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVKHLG 166 (175)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 166 (175)
....+.+.+.++||.+....
T Consensus 220 ----------------------~~~~vr~~L~~aGf~v~~~~ 239 (676)
T 3ps9_A 220 ----------------------SAGFVRRGLQDAGFTMQKRK 239 (676)
T ss_dssp ----------------------CCHHHHHHHHHHTCEEEEEE
T ss_pred ----------------------CcHHHHHHHHhCCeEEEecc
Confidence 02566778888999877653
No 367
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=95.21 E-value=0.013 Score=44.27 Aligned_cols=89 Identities=17% Similarity=0.205 Sum_probs=57.9
Q ss_pred CcEEEeCCCc-cHHH-HHHH-HhCCCc-EEEEeCChH---HHHHHHHHHHhhCCCCCCcceeecc---CCCCCCCCCCCc
Q 030558 10 RRCIELGSGT-GALA-IFLR-KAMNLD-ITTSDYNDQ---EIEDNIAYNSTTNGITPALPHIKHS---WGDAFPIPNPDW 79 (175)
Q Consensus 10 ~~vLDlGcG~-G~~~-~~l~-~~~~~~-v~~~D~s~~---~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~f 79 (175)
.+||=+|+|. |..+ ..++ +..|.+ |+++|.+++ .+ +.++. .+. ..+... +.+.... .+.+
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~-~~~~~----lGa----~~v~~~~~~~~~i~~~-~gg~ 243 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTI-DIIEE----LDA----TYVDSRQTPVEDVPDV-YEQM 243 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHH-HHHHH----TTC----EEEETTTSCGGGHHHH-SCCE
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHH-HHHHH----cCC----cccCCCccCHHHHHHh-CCCC
Confidence 8999999875 8888 8898 877887 999999886 54 44432 122 111000 1010011 2378
Q ss_pred cEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 80 DLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 80 D~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
|+|+-...- + ..++...++++++|+++..
T Consensus 244 Dvvid~~g~------~---~~~~~~~~~l~~~G~iv~~ 272 (357)
T 2b5w_A 244 DFIYEATGF------P---KHAIQSVQALAPNGVGALL 272 (357)
T ss_dssp EEEEECSCC------H---HHHHHHHHHEEEEEEEEEC
T ss_pred CEEEECCCC------h---HHHHHHHHHHhcCCEEEEE
Confidence 999864321 1 4678889999999988776
No 368
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=95.17 E-value=0.062 Score=40.25 Aligned_cols=93 Identities=14% Similarity=0.159 Sum_probs=60.1
Q ss_pred ccccCCCcEEEeC-CC-ccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCC----C-CCC
Q 030558 4 REWIERRRCIELG-SG-TGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAF----P-IPN 76 (175)
Q Consensus 4 ~~~~~~~~vLDlG-cG-~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~ 76 (175)
....+|++||=+| +| .|..+..+++..|.+|+++ .+++.+ +.++.. +. ..+. ...+.. . ...
T Consensus 146 ~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~-~~~~~l----Ga----~~i~-~~~~~~~~~~~~~~~ 214 (343)
T 3gaz_A 146 AQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDL-EYVRDL----GA----TPID-ASREPEDYAAEHTAG 214 (343)
T ss_dssp TCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHH-HHHHHH----TS----EEEE-TTSCHHHHHHHHHTT
T ss_pred cCCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHH-HHHHHc----CC----CEec-cCCCHHHHHHHHhcC
Confidence 3455789999999 44 5999999999889999999 777665 443321 22 1111 100000 0 112
Q ss_pred CCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 77 PDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 77 ~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
..+|+|+-+-. . ..++...++++++|+++..
T Consensus 215 ~g~D~vid~~g-------~---~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 215 QGFDLVYDTLG-------G---PVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp SCEEEEEESSC-------T---HHHHHHHHHEEEEEEEEES
T ss_pred CCceEEEECCC-------c---HHHHHHHHHHhcCCeEEEE
Confidence 46999886422 1 4677888999999988876
No 369
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=95.07 E-value=0.0069 Score=45.93 Aligned_cols=94 Identities=15% Similarity=0.109 Sum_probs=57.4
Q ss_pred CCCcEEEeCCCc-cHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCC
Q 030558 8 ERRRCIELGSGT-GALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASD 86 (175)
Q Consensus 8 ~~~~vLDlGcG~-G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~ 86 (175)
+|.+||=+|+|. |..+..+++..|.+|+++|.+++.+ +.+.+. .+.. ..+.....+......+.+|+|+-.-
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~-~~~~~~---lGa~---~v~~~~~~~~~~~~~~~~D~vid~~ 259 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKK-EEALKN---FGAD---SFLVSRDQEQMQAAAGTLDGIIDTV 259 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGH-HHHHHT---SCCS---EEEETTCHHHHHHTTTCEEEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHh---cCCc---eEEeccCHHHHHHhhCCCCEEEECC
Confidence 788999999875 8888888888889999999998765 333211 1220 1111100000000113689998753
Q ss_pred cccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 87 ILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 87 ~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
.. . ..++...+.++++|+++..
T Consensus 260 g~---~------~~~~~~~~~l~~~G~iv~~ 281 (366)
T 1yqd_A 260 SA---V------HPLLPLFGLLKSHGKLILV 281 (366)
T ss_dssp SS---C------CCSHHHHHHEEEEEEEEEC
T ss_pred Cc---H------HHHHHHHHHHhcCCEEEEE
Confidence 32 1 1245577889999988775
No 370
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=95.02 E-value=0.039 Score=40.87 Aligned_cols=94 Identities=16% Similarity=0.037 Sum_probs=57.3
Q ss_pred cccCCCcEEEeC-CC-ccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEE
Q 030558 5 EWIERRRCIELG-SG-TGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLI 82 (175)
Q Consensus 5 ~~~~~~~vLDlG-cG-~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i 82 (175)
...+|.+||=+| +| .|..+..+++..|.+|++++. +... +.+++. +.. ..+.....+........+|+|
T Consensus 149 ~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~-~~~~-~~~~~l----Ga~---~~i~~~~~~~~~~~~~g~D~v 219 (321)
T 3tqh_A 149 EVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTAS-KRNH-AFLKAL----GAE---QCINYHEEDFLLAISTPVDAV 219 (321)
T ss_dssp TCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEEC-HHHH-HHHHHH----TCS---EEEETTTSCHHHHCCSCEEEE
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEec-cchH-HHHHHc----CCC---EEEeCCCcchhhhhccCCCEE
Confidence 455789999996 66 499999999988999999974 4333 333321 220 111111111011111468998
Q ss_pred EeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 83 LASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 83 ~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
+-.-. . ..++...++++++|+++..
T Consensus 220 ~d~~g------~----~~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 220 IDLVG------G----DVGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp EESSC------H----HHHHHHGGGEEEEEEEEEC
T ss_pred EECCC------c----HHHHHHHHhccCCCEEEEe
Confidence 86422 1 2337788999999988876
No 371
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=94.98 E-value=0.058 Score=41.27 Aligned_cols=35 Identities=26% Similarity=0.359 Sum_probs=27.7
Q ss_pred CcEEEeCCCccHHHHHHHHhC--------CCcEEEEeCChHHH
Q 030558 10 RRCIELGSGTGALAIFLRKAM--------NLDITTSDYNDQEI 44 (175)
Q Consensus 10 ~~vLDlGcG~G~~~~~l~~~~--------~~~v~~~D~s~~~l 44 (175)
-+|+|+|.|+|.++..+.+.. ..+++.+|+|+...
T Consensus 82 ~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr 124 (387)
T 1zkd_A 82 LRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLR 124 (387)
T ss_dssp EEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHH
T ss_pred cEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHH
Confidence 469999999999997765432 23799999999763
No 372
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=94.95 E-value=0.035 Score=45.63 Aligned_cols=127 Identities=14% Similarity=0.171 Sum_probs=70.6
Q ss_pred CCcEEEeCCCccHHHHHHHHhC-------------CCcEEEEeC---ChHHHHHHHHH---------HHhhCCCCC--Cc
Q 030558 9 RRRCIELGSGTGALAIFLRKAM-------------NLDITTSDY---NDQEIEDNIAY---------NSTTNGITP--AL 61 (175)
Q Consensus 9 ~~~vLDlGcG~G~~~~~l~~~~-------------~~~v~~~D~---s~~~l~~~~~~---------~~~~~~~~~--~~ 61 (175)
.-+|+|+|-|+|...+.+.+.. ..+++.++. +...+.+..+. .+....... .+
T Consensus 59 ~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 138 (689)
T 3pvc_A 59 SCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAGC 138 (689)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEE
T ss_pred ceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCCc
Confidence 3589999999999998765532 146899999 44444322211 111111100 01
Q ss_pred c---------eeeccCCCC---CC-CC---CCCccEEEeCCcccCcccc-hH--HHHHHHHHHhhcCCCCceeeccccCC
Q 030558 62 P---------HIKHSWGDA---FP-IP---NPDWDLILASDILLYVKQY-SN--LIKSLSVLLKSYKPKDSQVGHLTKNE 122 (175)
Q Consensus 62 ~---------~~~~~~~~~---~~-~~---~~~fD~i~~~~~l~~~~~~-~~--~~~~l~~l~~~l~pgG~~~~~~~~~~ 122 (175)
. .+.+..+|. ++ .. ...+|.++.-..- +.. ++ -..++..+.++++|||++... .
T Consensus 139 ~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~---p~~np~~w~~~~~~~l~~~~~~g~~~~t~--~-- 211 (689)
T 3pvc_A 139 HRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFA---PAKNPDMWNEQLFNAMARMTRPGGTFSTF--T-- 211 (689)
T ss_dssp EEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSC---C--CCTTCSHHHHHHHHHHEEEEEEEEES--C--
T ss_pred eEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCC---CCCChhhhhHHHHHHHHHHhCCCCEEEec--c--
Confidence 0 111222332 12 11 4679998873211 111 11 138899999999999855441 0
Q ss_pred CCCCCCCCCCCceEeeeeccCCCcchhHHHHHHHHcCCeeEEec
Q 030558 123 QGEGTEGLPWPAFLMSWRRRIGKEDETIFFTSCENAGLEVKHLG 166 (175)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 166 (175)
......+.+.++||.+..+.
T Consensus 212 ------------------------~~~~vr~~l~~aGf~~~~~~ 231 (689)
T 3pvc_A 212 ------------------------AAGFVRRGLQQAGFNVTKVK 231 (689)
T ss_dssp ------------------------CCHHHHHHHHHTTCEEEEEE
T ss_pred ------------------------CcHHHHHHHHhCCeEEEecc
Confidence 02456777889999887754
No 373
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=94.65 E-value=0.19 Score=37.40 Aligned_cols=96 Identities=20% Similarity=0.142 Sum_probs=59.6
Q ss_pred cccCCCcEEEeCCCc-cHHHHHHHHhCCCc-EEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCC----C-CCCC
Q 030558 5 EWIERRRCIELGSGT-GALAIFLRKAMNLD-ITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAF----P-IPNP 77 (175)
Q Consensus 5 ~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~-v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~ 77 (175)
...+|.+||=.|+|. |..+..+++..+.. ++++|.+++.+ +.+++. +.. ..+...-.+.. . ....
T Consensus 157 ~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~-~~a~~l----Ga~---~~i~~~~~~~~~~~~~~~~~~ 228 (346)
T 4a2c_A 157 QGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKL-ALAKSF----GAM---QTFNSSEMSAPQMQSVLRELR 228 (346)
T ss_dssp TCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHH-HHHHHT----TCS---EEEETTTSCHHHHHHHHGGGC
T ss_pred ccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHH-HHHHHc----CCe---EEEeCCCCCHHHHHHhhcccC
Confidence 345788999999975 77888888887766 68999999765 444321 220 11111110000 0 0123
Q ss_pred CccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 78 DWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 78 ~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
.+|+|+-... .+ ..++...++++++|++++.
T Consensus 229 g~d~v~d~~G------~~---~~~~~~~~~l~~~G~~v~~ 259 (346)
T 4a2c_A 229 FNQLILETAG------VP---QTVELAVEIAGPHAQLALV 259 (346)
T ss_dssp SSEEEEECSC------SH---HHHHHHHHHCCTTCEEEEC
T ss_pred Cccccccccc------cc---chhhhhhheecCCeEEEEE
Confidence 5788776432 12 6778888999999988876
No 374
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=94.60 E-value=0.31 Score=36.10 Aligned_cols=107 Identities=12% Similarity=0.063 Sum_probs=65.0
Q ss_pred CcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCC--CCCCcceeeccCCCCC-------CCCCCCcc
Q 030558 10 RRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNG--ITPALPHIKHSWGDAF-------PIPNPDWD 80 (175)
Q Consensus 10 ~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-------~~~~~~fD 80 (175)
+.|++||||-=.....+....+..|+=+|. |.++ +..++.+...+ .......+..+..+.+ .+..+..-
T Consensus 104 ~QvV~LGaGlDTra~Rl~~~~~~~v~evD~-P~vi-~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~~Pt 181 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDWPTGTTVYEIDQ-PKVL-AYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPSART 181 (310)
T ss_dssp CEEEEETCTTCCHHHHSCCCTTCEEEEEEC-HHHH-HHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCTTSCE
T ss_pred CeEEEeCCCCCchhhhccCCCCcEEEEcCC-HHHH-HHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCCCCCCE
Confidence 569999999766555553211457888884 6565 45444444322 1223344444443311 11223445
Q ss_pred EEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeeccc
Q 030558 81 LILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLT 119 (175)
Q Consensus 81 ~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~ 119 (175)
++++..+++|... ++...+++.+...+.||+.+++...
T Consensus 182 ~~i~Egvl~Yl~~-~~~~~ll~~l~~~~~~gs~l~~d~~ 219 (310)
T 2uyo_A 182 AWLAEGLLMYLPA-TAQDGLFTEIGGLSAVGSRIAVETS 219 (310)
T ss_dssp EEEECSCGGGSCH-HHHHHHHHHHHHTCCTTCEEEEECC
T ss_pred EEEEechHhhCCH-HHHHHHHHHHHHhCCCCeEEEEEec
Confidence 7778888866664 5788999999998889987777643
No 375
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=93.93 E-value=0.22 Score=37.29 Aligned_cols=90 Identities=12% Similarity=0.045 Sum_probs=53.0
Q ss_pred CcEEEe-CCC-ccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCC----CC-CCCCccEE
Q 030558 10 RRCIEL-GSG-TGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAF----PI-PNPDWDLI 82 (175)
Q Consensus 10 ~~vLDl-GcG-~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~fD~i 82 (175)
++||=. |+| .|..+..+++..|.+|+++|.+++.+ +.++.. +.. ..+.....+.. .. ....+|+|
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~-~~~~~~----Ga~---~~~~~~~~~~~~~v~~~~~~~g~D~v 237 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQI-ALLKDI----GAA---HVLNEKAPDFEATLREVMKAEQPRIF 237 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGH-HHHHHH----TCS---EEEETTSTTHHHHHHHHHHHHCCCEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHc----CCC---EEEECCcHHHHHHHHHHhcCCCCcEE
Confidence 455533 555 47777888887789999999998775 444321 110 11111100000 00 01368999
Q ss_pred EeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 83 LASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 83 ~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
+-+..- ..++...++++++|+++..
T Consensus 238 id~~g~----------~~~~~~~~~l~~~G~iv~~ 262 (349)
T 3pi7_A 238 LDAVTG----------PLASAIFNAMPKRARWIIY 262 (349)
T ss_dssp EESSCH----------HHHHHHHHHSCTTCEEEEC
T ss_pred EECCCC----------hhHHHHHhhhcCCCEEEEE
Confidence 875331 2346788999999988876
No 376
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=93.87 E-value=0.044 Score=41.00 Aligned_cols=96 Identities=16% Similarity=0.146 Sum_probs=56.9
Q ss_pred cccCCCcEEEeCCCc-cHHHHHHHH-hCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCC---CC-C-CCCC
Q 030558 5 EWIERRRCIELGSGT-GALAIFLRK-AMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGD---AF-P-IPNP 77 (175)
Q Consensus 5 ~~~~~~~vLDlGcG~-G~~~~~l~~-~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~-~~~~ 77 (175)
...+|.+||=+|+|. |..+..+++ ..+.+|+++|.+++-+ +.++.. +.. ..+.....+ .. . ....
T Consensus 160 ~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~-~~~~~~----Ga~---~~i~~~~~~~~~~v~~~t~g~ 231 (348)
T 4eez_A 160 GVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKL-NLAKKI----GAD---VTINSGDVNPVDEIKKITGGL 231 (348)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHH-HHHHHT----TCS---EEEEC-CCCHHHHHHHHTTSS
T ss_pred CCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHh-hhhhhc----CCe---EEEeCCCCCHHHHhhhhcCCC
Confidence 345788999999986 556666555 4588999999999765 333321 220 111111111 00 0 1122
Q ss_pred CccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 78 DWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 78 ~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
.+|.++.... .. ..+....+.++++|++++.
T Consensus 232 g~d~~~~~~~------~~---~~~~~~~~~l~~~G~~v~~ 262 (348)
T 4eez_A 232 GVQSAIVCAV------AR---IAFEQAVASLKPMGKMVAV 262 (348)
T ss_dssp CEEEEEECCS------CH---HHHHHHHHTEEEEEEEEEC
T ss_pred CceEEEEecc------Cc---chhheeheeecCCceEEEE
Confidence 5666665322 12 6778889999999988876
No 377
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=93.81 E-value=0.072 Score=40.37 Aligned_cols=94 Identities=19% Similarity=0.159 Sum_probs=57.3
Q ss_pred ccCCCcEEEeC-CC-ccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCC---CCCCCCCCcc
Q 030558 6 WIERRRCIELG-SG-TGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGD---AFPIPNPDWD 80 (175)
Q Consensus 6 ~~~~~~vLDlG-cG-~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~fD 80 (175)
..+|++||=.| +| .|..+..+++..|.+|++++ +++.. +.++. .+.. ..+.....+ ... ....+|
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~-~~~~~----lGa~---~v~~~~~~~~~~~~~-~~~g~D 250 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDAS-ELVRK----LGAD---DVIDYKSGSVEEQLK-SLKPFD 250 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGH-HHHHH----TTCS---EEEETTSSCHHHHHH-TSCCBS
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHH-HHHHH----cCCC---EEEECCchHHHHHHh-hcCCCC
Confidence 45789999999 55 59999999888889999998 66554 33322 1220 111111000 000 114689
Q ss_pred EEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 81 LILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 81 ~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
+|+-+..- .. ..++...++++++|+++..
T Consensus 251 ~vid~~g~-----~~---~~~~~~~~~l~~~G~iv~~ 279 (375)
T 2vn8_A 251 FILDNVGG-----ST---ETWAPDFLKKWSGATYVTL 279 (375)
T ss_dssp EEEESSCT-----TH---HHHGGGGBCSSSCCEEEES
T ss_pred EEEECCCC-----hh---hhhHHHHHhhcCCcEEEEe
Confidence 99865332 11 3456677889999988776
No 378
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=93.79 E-value=0.03 Score=42.12 Aligned_cols=93 Identities=5% Similarity=-0.012 Sum_probs=59.4
Q ss_pred ccCC--CcEEEeCC--CccHHHHHHHHhCCC-cEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCC------CC
Q 030558 6 WIER--RRCIELGS--GTGALAIFLRKAMNL-DITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAF------PI 74 (175)
Q Consensus 6 ~~~~--~~vLDlGc--G~G~~~~~l~~~~~~-~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 74 (175)
..+| ++||=.|+ |.|..+..+++..|. +|+++|.+++.+ +.+++. .+. . ..++..+.. ..
T Consensus 156 ~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~-~~~~~~---~g~----~-~~~d~~~~~~~~~~~~~ 226 (357)
T 2zb4_A 156 ITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKC-ILLTSE---LGF----D-AAINYKKDNVAEQLRES 226 (357)
T ss_dssp CCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHH-HHHHHT---SCC----S-EEEETTTSCHHHHHHHH
T ss_pred CCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHH-HHHHHH---cCC----c-eEEecCchHHHHHHHHh
Confidence 4457 89999997 458888888887788 999999998665 333321 122 1 111111100 00
Q ss_pred CCCCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 75 PNPDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 75 ~~~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
..+.+|+++.+.. . ..++...++++++|+++..
T Consensus 227 ~~~~~d~vi~~~G-------~---~~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 227 CPAGVDVYFDNVG-------G---NISDTVISQMNENSHIILC 259 (357)
T ss_dssp CTTCEEEEEESCC-------H---HHHHHHHHTEEEEEEEEEC
T ss_pred cCCCCCEEEECCC-------H---HHHHHHHHHhccCcEEEEE
Confidence 1126899887533 1 5678889999999988776
No 379
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=93.77 E-value=0.17 Score=39.27 Aligned_cols=36 Identities=33% Similarity=0.409 Sum_probs=28.1
Q ss_pred CCcEEEeCCCccHHHHHHHHhC------CCcEEEEeCChHHH
Q 030558 9 RRRCIELGSGTGALAIFLRKAM------NLDITTSDYNDQEI 44 (175)
Q Consensus 9 ~~~vLDlGcG~G~~~~~l~~~~------~~~v~~~D~s~~~l 44 (175)
.-+|+|+|.|+|.++..+.+.. ..+++.+|+|+..-
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr 179 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELR 179 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHH
Confidence 3589999999999997665432 23699999999763
No 380
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=93.56 E-value=0.067 Score=41.20 Aligned_cols=38 Identities=16% Similarity=0.300 Sum_probs=32.9
Q ss_pred cCCCcEEEeCCCc-cHHHHHHHHhCCCcEEEEeCChHHH
Q 030558 7 IERRRCIELGSGT-GALAIFLRKAMNLDITTSDYNDQEI 44 (175)
Q Consensus 7 ~~~~~vLDlGcG~-G~~~~~l~~~~~~~v~~~D~s~~~l 44 (175)
.++.+|+=+|+|. |..+..+++..|.+|+++|.++..+
T Consensus 188 v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l 226 (405)
T 4dio_A 188 VPAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAK 226 (405)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHH
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHH
Confidence 4678999999996 8888888888899999999999765
No 381
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=93.54 E-value=0.2 Score=37.64 Aligned_cols=96 Identities=18% Similarity=0.112 Sum_probs=52.8
Q ss_pred cccCCCcEEEeCC-C-ccHHHHHHHHhCCCcEEEE-eCChHHH--HHHHHHHHhhCCCCCCcceeecc--CCCCC-CCCC
Q 030558 5 EWIERRRCIELGS-G-TGALAIFLRKAMNLDITTS-DYNDQEI--EDNIAYNSTTNGITPALPHIKHS--WGDAF-PIPN 76 (175)
Q Consensus 5 ~~~~~~~vLDlGc-G-~G~~~~~l~~~~~~~v~~~-D~s~~~l--~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~ 76 (175)
...+|.+||=+|+ | .|..+..+|+..|.+++++ +.++..- .+.++ ..+.. ..+... +.+.. ....
T Consensus 164 ~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~----~lGa~---~vi~~~~~~~~~~~~~~~ 236 (357)
T 1zsy_A 164 QLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLK----SLGAE---HVITEEELRRPEMKNFFK 236 (357)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHH----HTTCS---EEEEHHHHHSGGGGGTTS
T ss_pred ccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHH----hcCCc---EEEecCcchHHHHHHHHh
Confidence 3457899999997 4 5999999999878876555 4443221 02222 12221 111110 00111 1111
Q ss_pred --CCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 77 --PDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 77 --~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
+.+|+|+-.-. . ....+..++++++|+++..
T Consensus 237 ~~~~~Dvvid~~g------~----~~~~~~~~~l~~~G~iv~~ 269 (357)
T 1zsy_A 237 DMPQPRLALNCVG------G----KSSTELLRQLARGGTMVTY 269 (357)
T ss_dssp SSCCCSEEEESSC------H----HHHHHHHTTSCTTCEEEEC
T ss_pred CCCCceEEEECCC------c----HHHHHHHHhhCCCCEEEEE
Confidence 14899886422 1 1224578999999988775
No 382
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=93.12 E-value=0.71 Score=33.24 Aligned_cols=104 Identities=13% Similarity=-0.028 Sum_probs=57.9
Q ss_pred CCcEEEeCCCccHHHHHHHHh--------CCCcEEEEeC-----ChHH------------------HHHHHHHHHh---h
Q 030558 9 RRRCIELGSGTGALAIFLRKA--------MNLDITTSDY-----NDQE------------------IEDNIAYNST---T 54 (175)
Q Consensus 9 ~~~vLDlGcG~G~~~~~l~~~--------~~~~v~~~D~-----s~~~------------------l~~~~~~~~~---~ 54 (175)
.+.|+|+|+..|..+..+++. ...+|+++|. .+.. ..+...+.+. .
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 457999999999988876652 1367999993 2210 0011111111 0
Q ss_pred CCCCCC-cceeeccCCC---CCC-----CCCCCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 55 NGITPA-LPHIKHSWGD---AFP-----IPNPDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 55 ~~~~~~-~~~~~~~~~~---~~~-----~~~~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
...... -..+.+..++ .++ .+..+||++..-.=. .+.-...++.+...|+|||.+++-
T Consensus 150 ~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~-----Y~~t~~~le~~~p~l~~GGvIv~D 216 (257)
T 3tos_A 150 SDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL-----YEPTKAVLEAIRPYLTKGSIVAFD 216 (257)
T ss_dssp TSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC-----HHHHHHHHHHHGGGEEEEEEEEES
T ss_pred hhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc-----cchHHHHHHHHHHHhCCCcEEEEc
Confidence 001011 1334444443 221 234479998874322 223347788899999999988874
No 383
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.08 E-value=0.026 Score=43.05 Aligned_cols=38 Identities=21% Similarity=0.275 Sum_probs=32.5
Q ss_pred cCCCcEEEeCCCc-cHHHHHHHHhCCCcEEEEeCChHHH
Q 030558 7 IERRRCIELGSGT-GALAIFLRKAMNLDITTSDYNDQEI 44 (175)
Q Consensus 7 ~~~~~vLDlGcG~-G~~~~~l~~~~~~~v~~~D~s~~~l 44 (175)
.++++|+=+|+|. |..+..+++..|.+|+++|.++..+
T Consensus 182 v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l 220 (381)
T 3p2y_A 182 VKPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVA 220 (381)
T ss_dssp ECCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGH
T ss_pred cCCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 4678999999996 8888777777799999999999776
No 384
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=92.77 E-value=0.23 Score=36.54 Aligned_cols=42 Identities=14% Similarity=0.163 Sum_probs=33.4
Q ss_pred CCCcEEEeCCCccHHHHHHHHhCCCc---EEEEeCChHHHHHHHHHH
Q 030558 8 ERRRCIELGSGTGALAIFLRKAMNLD---ITTSDYNDQEIEDNIAYN 51 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~~~~~~---v~~~D~s~~~l~~~~~~~ 51 (175)
.+-+++||-||.|.+++-+.+. |.+ |.++|+++..+ +..+.|
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~a-G~~~~~v~a~E~d~~a~-~ty~~N 59 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDL-GIQVDRYIASEVCEDSI-TVGMVR 59 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHT-TBCEEEEEEECCCHHHH-HHHHHH
T ss_pred CCCEEEEeCcCccHHHHHHHHC-CCccceEEEEECCHHHH-HHHHHh
Confidence 3568999999999999999776 554 59999999886 555555
No 385
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=92.60 E-value=0.21 Score=37.41 Aligned_cols=42 Identities=19% Similarity=0.133 Sum_probs=33.2
Q ss_pred CcEEEeCCCccHHHHHHHHhCC--CcEEEEeCChHHHHHHHHHHH
Q 030558 10 RRCIELGSGTGALAIFLRKAMN--LDITTSDYNDQEIEDNIAYNS 52 (175)
Q Consensus 10 ~~vLDlGcG~G~~~~~l~~~~~--~~v~~~D~s~~~l~~~~~~~~ 52 (175)
-+++|+-||.|.+++-+.+.+- ..|.++|+++... +..+.|.
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~-~ty~~N~ 47 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVAN-SVYKHNF 47 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHH-HHHHHHC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHH-HHHHHhC
Confidence 3799999999999999977632 3489999999886 6666554
No 386
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=92.31 E-value=0.046 Score=41.38 Aligned_cols=104 Identities=11% Similarity=0.128 Sum_probs=58.3
Q ss_pred cCCCcEEEeCCCc-cHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeC
Q 030558 7 IERRRCIELGSGT-GALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILAS 85 (175)
Q Consensus 7 ~~~~~vLDlGcG~-G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~ 85 (175)
.++++|+=+|+|. |.....+++..|.+|+++|.+++.+ +.++...... . ..+.... +.+...-..+|+|+..
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~-~~~~~~~~~~-~----~~~~~~~-~~~~~~~~~~DvVI~~ 237 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERL-SYLETLFGSR-V----ELLYSNS-AEIETAVAEADLLIGA 237 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHGGG-S----EEEECCH-HHHHHHHHTCSEEEEC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHH-HHHHHhhCce-e----EeeeCCH-HHHHHHHcCCCEEEEC
Confidence 4568999999974 7777777777788999999999776 4443322211 0 0010000 0000001258999875
Q ss_pred CcccCcccchHHHHHHHHHHhhcCCCCceeecccc
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTK 120 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~ 120 (175)
-..-... .+. -+.++..+.++|+|+++...+.
T Consensus 238 ~~~~~~~-~~~--li~~~~~~~~~~g~~ivdv~~~ 269 (361)
T 1pjc_A 238 VLVPGRR-API--LVPASLVEQMRTGSVIVDVAVD 269 (361)
T ss_dssp CCCTTSS-CCC--CBCHHHHTTSCTTCEEEETTCT
T ss_pred CCcCCCC-CCe--ecCHHHHhhCCCCCEEEEEecC
Confidence 4431100 010 1134567788999977776543
No 387
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=92.23 E-value=0.12 Score=38.86 Aligned_cols=38 Identities=16% Similarity=0.167 Sum_probs=29.9
Q ss_pred cccCC-CcEEEeCC-C-ccHHHHHHHHhCCCcEEEEeCChH
Q 030558 5 EWIER-RRCIELGS-G-TGALAIFLRKAMNLDITTSDYNDQ 42 (175)
Q Consensus 5 ~~~~~-~~vLDlGc-G-~G~~~~~l~~~~~~~v~~~D~s~~ 42 (175)
...+| .+||=.|+ | .|..+..+|+..|.+++++..+++
T Consensus 163 ~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~ 203 (364)
T 1gu7_A 163 KLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRP 203 (364)
T ss_dssp CCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCT
T ss_pred ccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCcc
Confidence 34567 89999987 5 599999999988999888875553
No 388
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=92.03 E-value=0.58 Score=34.63 Aligned_cols=87 Identities=17% Similarity=0.206 Sum_probs=51.1
Q ss_pred CcEEEeCCCc-c-HHHHHHHHhCCC--cEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCC-CCCCccEEEe
Q 030558 10 RRCIELGSGT-G-ALAIFLRKAMNL--DITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPI-PNPDWDLILA 84 (175)
Q Consensus 10 ~~vLDlGcG~-G-~~~~~l~~~~~~--~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~fD~i~~ 84 (175)
.+|.=||+|. | .++..+++. |. +|+++|.+++.+ +.+.. .+. ..... ..... .-...|+|+.
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~-G~~~~V~~~dr~~~~~-~~a~~----~G~---~~~~~----~~~~~~~~~~aDvVil 100 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRS-GFKGKIYGYDINPESI-SKAVD----LGI---IDEGT----TSIAKVEDFSPDFVML 100 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHT-TCCSEEEEECSCHHHH-HHHHH----TTS---CSEEE----SCTTGGGGGCCSEEEE
T ss_pred CEEEEEeeCHHHHHHHHHHHhC-CCCCEEEEEECCHHHH-HHHHH----CCC---cchhc----CCHHHHhhccCCEEEE
Confidence 5788899885 3 445556554 66 899999999776 33221 122 00111 11111 1235798887
Q ss_pred CCcccCcccchHHHHHHHHHHhhcCCCCcee
Q 030558 85 SDILLYVKQYSNLIKSLSVLLKSYKPKDSQV 115 (175)
Q Consensus 85 ~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~ 115 (175)
+-.. .....+++++...++|+..++
T Consensus 101 avp~------~~~~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 101 SSPV------RTFREIAKKLSYILSEDATVT 125 (314)
T ss_dssp CSCG------GGHHHHHHHHHHHSCTTCEEE
T ss_pred eCCH------HHHHHHHHHHhhccCCCcEEE
Confidence 5332 234578889988899886443
No 389
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=91.94 E-value=0.12 Score=39.22 Aligned_cols=93 Identities=8% Similarity=0.026 Sum_probs=58.0
Q ss_pred cCCCcEEEeCC-C-ccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCC---CC-CCCCCCcc
Q 030558 7 IERRRCIELGS-G-TGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGD---AF-PIPNPDWD 80 (175)
Q Consensus 7 ~~~~~vLDlGc-G-~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~fD 80 (175)
.+|.+||=+|+ | .|..+..+++..|.+|+++. +++.+ +.++. .+.. ..+.....+ .. ....+.+|
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~-~~~~~----lGa~---~vi~~~~~~~~~~v~~~t~g~~d 233 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNF-DLAKS----RGAE---EVFDYRAPNLAQTIRTYTKNNLR 233 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGH-HHHHH----TTCS---EEEETTSTTHHHHHHHHTTTCCC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHH-HHHHH----cCCc---EEEECCCchHHHHHHHHccCCcc
Confidence 57889999998 4 69999999998899999885 77664 44332 1220 111111111 00 11123599
Q ss_pred EEEeCCcccCcccchHHHHHHHHHHhhc-CCCCceeec
Q 030558 81 LILASDILLYVKQYSNLIKSLSVLLKSY-KPKDSQVGH 117 (175)
Q Consensus 81 ~i~~~~~l~~~~~~~~~~~~l~~l~~~l-~pgG~~~~~ 117 (175)
+|+-.-. .+ ..++...+.+ +++|+++..
T Consensus 234 ~v~d~~g------~~---~~~~~~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 234 YALDCIT------NV---ESTTFCFAAIGRAGGHYVSL 262 (371)
T ss_dssp EEEESSC------SH---HHHHHHHHHSCTTCEEEEES
T ss_pred EEEECCC------ch---HHHHHHHHHhhcCCCEEEEE
Confidence 9886422 12 5677788888 699988776
No 390
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=91.49 E-value=0.25 Score=37.16 Aligned_cols=97 Identities=16% Similarity=0.141 Sum_probs=59.9
Q ss_pred cccCCCcEEEeCCCc-cHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCC-CCC-CCCCCCccE
Q 030558 5 EWIERRRCIELGSGT-GALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWG-DAF-PIPNPDWDL 81 (175)
Q Consensus 5 ~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~fD~ 81 (175)
...+|.+||=+|+|. |..+..+++..|.+|+++|.+++.+ +.++.. +.. ..+..... +.. ... +.+|+
T Consensus 176 ~~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~-~~~~~l----Ga~---~v~~~~~~~~~~~~~~-~~~D~ 246 (360)
T 1piw_A 176 GCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKR-EDAMKM----GAD---HYIATLEEGDWGEKYF-DTFDL 246 (360)
T ss_dssp TCSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTH-HHHHHH----TCS---EEEEGGGTSCHHHHSC-SCEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHH-HHHHHc----CCC---EEEcCcCchHHHHHhh-cCCCE
Confidence 345789999999875 8888888887788999999988775 444431 110 11111100 100 011 47999
Q ss_pred EEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 82 ILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 82 i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
|+-...-. . + ..++...++++++|+++..
T Consensus 247 vid~~g~~---~-~---~~~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 247 IVVCASSL---T-D---IDFNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp EEECCSCS---T-T---CCTTTGGGGEEEEEEEEEC
T ss_pred EEECCCCC---c-H---HHHHHHHHHhcCCCEEEEe
Confidence 98653210 0 1 2345577889999988775
No 391
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=91.31 E-value=0.84 Score=35.50 Aligned_cols=41 Identities=22% Similarity=0.237 Sum_probs=28.3
Q ss_pred CCCccccCCCcEEEeCCCc-cHHHHHHHHhCCCcEEEEeCCh
Q 030558 1 MHHREWIERRRCIELGSGT-GALAIFLRKAMNLDITTSDYND 41 (175)
Q Consensus 1 ~~~~~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~v~~~D~s~ 41 (175)
|+....+++++|+=+|.|. |.-+..++...|.+|+++|.++
T Consensus 1 m~~~~~~~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 1 MKTITTFENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp ---CCTTTTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CcchhhcCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 3344456789999999975 5544445555599999999965
No 392
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=90.54 E-value=0.12 Score=37.96 Aligned_cols=46 Identities=15% Similarity=0.190 Sum_probs=32.4
Q ss_pred CCCCCccEEEeCCcccCccc-----------------chHHHHHHHHHHhhcCCCCceeeccc
Q 030558 74 IPNPDWDLILASDILLYVKQ-----------------YSNLIKSLSVLLKSYKPKDSQVGHLT 119 (175)
Q Consensus 74 ~~~~~fD~i~~~~~l~~~~~-----------------~~~~~~~l~~l~~~l~pgG~~~~~~~ 119 (175)
.++++||+|+++...+.... ...+..+++++.++|+|||.+++.+.
T Consensus 36 l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 36 FPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp SCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 34679999999877531110 11245688899999999999988644
No 393
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=90.34 E-value=0.52 Score=36.58 Aligned_cols=38 Identities=16% Similarity=0.129 Sum_probs=31.8
Q ss_pred ccCCCcEEEeCCCc-cHHHHHHHHhCCCcEEEEeCChHH
Q 030558 6 WIERRRCIELGSGT-GALAIFLRKAMNLDITTSDYNDQE 43 (175)
Q Consensus 6 ~~~~~~vLDlGcG~-G~~~~~l~~~~~~~v~~~D~s~~~ 43 (175)
.+.|++|+=+|+|. |......++.+|.+|+++|.++..
T Consensus 217 ~L~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~r 255 (435)
T 3gvp_A 217 MFGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPIC 255 (435)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred eecCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence 45789999999996 777777777779999999999854
No 394
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=90.12 E-value=1.1 Score=37.26 Aligned_cols=151 Identities=15% Similarity=0.149 Sum_probs=78.0
Q ss_pred CcEEEeCCCc--cHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHh-----------hCCCCCCcceeeccCCCCCCCCC
Q 030558 10 RRCIELGSGT--GALAIFLRKAMNLDITTSDYNDQEIEDNIAYNST-----------TNGITPALPHIKHSWGDAFPIPN 76 (175)
Q Consensus 10 ~~vLDlGcG~--G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~ 76 (175)
++|-=||+|+ +..+..++.. |..|+..|++++.++ .....+. ..........+.. ..... .-
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~a-G~~V~l~D~~~~~l~-~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~-~l 391 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARV-GISVVAVESDPKQLD-AAKKIITFTLEKEASRAHQNGQASAKPKLRF--SSSTK-EL 391 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCEEEEECSSHHHHH-HHHHHHHHHHHHHHHHHHTTTCCCCCCCEEE--ESCGG-GG
T ss_pred cEEEEEcccHHHHHHHHHHHhC-CCchhcccchHhhhh-hHHHHHHHHHHHHHHhccccchhhhhhhhcc--cCcHH-HH
Confidence 5788889987 3334445554 899999999998763 2221111 1111001111110 11111 11
Q ss_pred CCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeeccccCCCCC-------------CCCCCCCCce-Eee--ee
Q 030558 77 PDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTKNEQGE-------------GTEGLPWPAF-LMS--WR 140 (175)
Q Consensus 77 ~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~~~~~~-------------~~~~~~~~~~-~~~--~~ 140 (175)
...|+|+=+ +. ++.+--.++++++-.+++|+..+.-.+....-.. .+++.+.+.. +.. ..
T Consensus 392 ~~aDlVIEA-V~---E~l~iK~~vf~~le~~~~~~aIlASNTSsl~i~~ia~~~~~p~r~ig~HFfnP~~~m~LVEvi~g 467 (742)
T 3zwc_A 392 STVDLVVEA-VF---EDMNLKKKVFAELSALCKPGAFLCTNTSALNVDDIASSTDRPQLVIGTHFFSPAHVMRLLEVIPS 467 (742)
T ss_dssp GSCSEEEEC-CC---SCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHTTSSCGGGEEEEECCSSTTTCCEEEEEEC
T ss_pred hhCCEEEEe-cc---ccHHHHHHHHHHHhhcCCCCceEEecCCcCChHHHHhhcCCccccccccccCCCCCCceEEEecC
Confidence 246888865 33 5555667999999999999975555433332111 1222222211 111 11
Q ss_pred ccCCCcchhHHHHHHHHcCCeeEEecceE
Q 030558 141 RRIGKEDETIFFTSCENAGLEVKHLGSRV 169 (175)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 169 (175)
.....+......+++++.|-....+.+..
T Consensus 468 ~~Ts~e~~~~~~~~~~~lgK~pV~vkd~p 496 (742)
T 3zwc_A 468 RYSSPTTIATVMSLSKKIGKIGVVVGNCY 496 (742)
T ss_dssp SSCCHHHHHHHHHHHHHTTCEEEECCCST
T ss_pred CCCCHHHHHHHHHHHHHhCCCCcccCCCC
Confidence 22223334666777888887766665543
No 395
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=90.06 E-value=2 Score=31.96 Aligned_cols=107 Identities=12% Similarity=0.069 Sum_probs=57.4
Q ss_pred CCcEEEeCCCc-cH-HHHHHHHhCCCcEEEEeCChHHHHHH---HHHHH----hhCCCCCCcce-e---eccCCCCCCCC
Q 030558 9 RRRCIELGSGT-GA-LAIFLRKAMNLDITTSDYNDQEIEDN---IAYNS----TTNGITPALPH-I---KHSWGDAFPIP 75 (175)
Q Consensus 9 ~~~vLDlGcG~-G~-~~~~l~~~~~~~v~~~D~s~~~l~~~---~~~~~----~~~~~~~~~~~-~---~~~~~~~~~~~ 75 (175)
..+|.=||+|+ |. .+..++.. |.+|+..|++++.+... +++.. ........... . .+....++...
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~-G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~a 84 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASG-GFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEA 84 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-TCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHhH
Confidence 35788899987 33 44455555 99999999999876322 11111 11111111000 0 00001111111
Q ss_pred CCCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeecccc
Q 030558 76 NPDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTK 120 (175)
Q Consensus 76 ~~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~ 120 (175)
-..-|+|+=+ +. ++.+--.++++++-++++|+..+.-.+..
T Consensus 85 ~~~ad~ViEa-v~---E~l~iK~~lf~~l~~~~~~~aIlaSNTSs 125 (319)
T 3ado_A 85 VEGVVHIQEC-VP---ENLDLKRKIFAQLDSIVDDRVVLSSSSSC 125 (319)
T ss_dssp TTTEEEEEEC-CC---SCHHHHHHHHHHHHTTCCSSSEEEECCSS
T ss_pred hccCcEEeec-cc---cHHHHHHHHHHHHHHHhhhcceeehhhhh
Confidence 2345776654 22 45555579999999999998755555433
No 396
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=90.04 E-value=0.35 Score=38.10 Aligned_cols=43 Identities=21% Similarity=0.232 Sum_probs=33.6
Q ss_pred CCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHH
Q 030558 9 RRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNS 52 (175)
Q Consensus 9 ~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~ 52 (175)
.-+++||-||.|.+++-+.+.+...|.++|+++... +..+.|.
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~-~ty~~N~ 130 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAV-RTYKANH 130 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHH-HHHHHHS
T ss_pred cceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHH-HHHHHhc
Confidence 467999999999999999766333489999999886 5555553
No 397
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=89.62 E-value=0.099 Score=43.83 Aligned_cols=91 Identities=14% Similarity=0.117 Sum_probs=57.3
Q ss_pred cccCCCcEEEeCC--CccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCC-CC-----C-CC
Q 030558 5 EWIERRRCIELGS--GTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGD-AF-----P-IP 75 (175)
Q Consensus 5 ~~~~~~~vLDlGc--G~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~-~~ 75 (175)
...+|.+||=.|+ |.|..++.+++..|.+|++++.+++. +.++ .+. ..+ ++..+ +. . ..
T Consensus 342 ~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~k~--~~l~-----lga----~~v-~~~~~~~~~~~i~~~t~ 409 (795)
T 3slk_A 342 GLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASEDKW--QAVE-----LSR----EHL-ASSRTCDFEQQFLGATG 409 (795)
T ss_dssp CCCTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGGGG--GGSC-----SCG----GGE-ECSSSSTHHHHHHHHSC
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChHHh--hhhh-----cCh----hhe-eecCChhHHHHHHHHcC
Confidence 4567899999984 46999999999999999999865521 1111 111 001 11000 00 0 12
Q ss_pred CCCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 76 NPDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 76 ~~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
...+|+|+-+-. . ..++...++++|+|+++..
T Consensus 410 g~GvDvVld~~g----g------~~~~~~l~~l~~~Gr~v~i 441 (795)
T 3slk_A 410 GRGVDVVLNSLA----G------EFADASLRMLPRGGRFLEL 441 (795)
T ss_dssp SSCCSEEEECCC----T------TTTHHHHTSCTTCEEEEEC
T ss_pred CCCeEEEEECCC----c------HHHHHHHHHhcCCCEEEEe
Confidence 346999997422 1 3457788999999998876
No 398
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=89.49 E-value=0.58 Score=30.50 Aligned_cols=41 Identities=17% Similarity=0.259 Sum_probs=28.0
Q ss_pred ccccCCCcEEEeCCCc-cHHHHHHHHhCCCcEEEEeCChHHH
Q 030558 4 REWIERRRCIELGSGT-GALAIFLRKAMNLDITTSDYNDQEI 44 (175)
Q Consensus 4 ~~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~v~~~D~s~~~l 44 (175)
+....+.+|+=+|+|. |......+...+.+|+++|.++..+
T Consensus 14 ~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~ 55 (155)
T 2g1u_A 14 SKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAF 55 (155)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGG
T ss_pred hcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHH
Confidence 4556688999999875 5554444444478999999998664
No 399
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=89.29 E-value=1.2 Score=31.91 Aligned_cols=85 Identities=13% Similarity=0.135 Sum_probs=47.5
Q ss_pred cEEEeCCCc-cHH-HHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCCcc
Q 030558 11 RCIELGSGT-GAL-AIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASDIL 88 (175)
Q Consensus 11 ~vLDlGcG~-G~~-~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~~l 88 (175)
+|.=||||. |.. +..+++. +.+|+++|.+++.+ +.+.+ .+.. .... ...... ...|+|+..-.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~~~~~~~-~~~~~----~g~~---~~~~----~~~~~~-~~~D~vi~av~- 66 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRR-GHYLIGVSRQQSTC-EKAVE----RQLV---DEAG----QDLSLL-QTAKIIFLCTP- 66 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHH-HHHHH----TTSC---SEEE----SCGGGG-TTCSEEEECSC-
T ss_pred EEEEEcCcHHHHHHHHHHHHC-CCEEEEEECCHHHH-HHHHh----CCCC---cccc----CCHHHh-CCCCEEEEECC-
Confidence 466688875 433 3344443 67899999998775 33321 1220 0111 111112 45798887532
Q ss_pred cCcccchHHHHHHHHHHhhcCCCCcee
Q 030558 89 LYVKQYSNLIKSLSVLLKSYKPKDSQV 115 (175)
Q Consensus 89 ~~~~~~~~~~~~l~~l~~~l~pgG~~~ 115 (175)
......+++++...++|+..++
T Consensus 67 -----~~~~~~~~~~l~~~~~~~~~vv 88 (279)
T 2f1k_A 67 -----IQLILPTLEKLIPHLSPTAIVT 88 (279)
T ss_dssp -----HHHHHHHHHHHGGGSCTTCEEE
T ss_pred -----HHHHHHHHHHHHhhCCCCCEEE
Confidence 2244577888888888876443
No 400
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=89.22 E-value=1.4 Score=31.92 Aligned_cols=100 Identities=15% Similarity=0.138 Sum_probs=52.0
Q ss_pred CcEEEeCCCc-cH-HHHHHHHhCCCcEEEEeCChHHHHHHHHHHHh--------hC-CCCCC-ccee--eccCCCCCCCC
Q 030558 10 RRCIELGSGT-GA-LAIFLRKAMNLDITTSDYNDQEIEDNIAYNST--------TN-GITPA-LPHI--KHSWGDAFPIP 75 (175)
Q Consensus 10 ~~vLDlGcG~-G~-~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~--------~~-~~~~~-~~~~--~~~~~~~~~~~ 75 (175)
++|.=||+|+ |. ++..+++. |.+|+.+|.+++.++ .+...+. .. ..... .... ......+....
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~-G~~V~l~d~~~~~~~-~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~ 82 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH-GFAVTAYDINTDALD-AAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQA 82 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSHHHHH-HHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCHHHHH-HHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHH
Confidence 4677788876 33 33444444 889999999998763 3322211 10 11000 0000 00001111111
Q ss_pred CCCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCcee
Q 030558 76 NPDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQV 115 (175)
Q Consensus 76 ~~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~ 115 (175)
-...|+|+.+-. +..+....+++++...++|+..++
T Consensus 83 ~~~aDlVi~av~----~~~~~~~~v~~~l~~~~~~~~il~ 118 (283)
T 4e12_A 83 VKDADLVIEAVP----ESLDLKRDIYTKLGELAPAKTIFA 118 (283)
T ss_dssp TTTCSEEEECCC----SCHHHHHHHHHHHHHHSCTTCEEE
T ss_pred hccCCEEEEecc----CcHHHHHHHHHHHHhhCCCCcEEE
Confidence 235699887633 223344578889999999876544
No 401
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=88.92 E-value=0.72 Score=34.60 Aligned_cols=94 Identities=11% Similarity=0.051 Sum_probs=57.2
Q ss_pred cccCCCcEEEeCCCc-cHHHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeecc--CCCCC-CCC-CCC
Q 030558 5 EWIERRRCIELGSGT-GALAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHS--WGDAF-PIP-NPD 78 (175)
Q Consensus 5 ~~~~~~~vLDlGcG~-G~~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~-~~~ 78 (175)
...+|.+||=+|+|. |..+..+++.. |.+|+++|.+++.+ +.++. .+.. ..+... +.+.. ... ...
T Consensus 183 ~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~-~~~~~----lGa~---~vi~~~~~~~~~v~~~~~g~g 254 (359)
T 1h2b_A 183 TLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKL-KLAER----LGAD---HVVDARRDPVKQVMELTRGRG 254 (359)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHH-HHHHH----TTCS---EEEETTSCHHHHHHHHTTTCC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHH-HHHHH----hCCC---EEEeccchHHHHHHHHhCCCC
Confidence 355789999999974 88888898988 88999999998765 44432 1220 011110 00000 111 226
Q ss_pred ccEEEeCCcccCcccchHHHH--HHHHHHhhcCCCCceeec
Q 030558 79 WDLILASDILLYVKQYSNLIK--SLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 79 fD~i~~~~~l~~~~~~~~~~~--~l~~l~~~l~pgG~~~~~ 117 (175)
+|+|+-.-.- + . .++...+. ++|+++..
T Consensus 255 ~Dvvid~~G~------~---~~~~~~~~~~~--~~G~~v~~ 284 (359)
T 1h2b_A 255 VNVAMDFVGS------Q---ATVDYTPYLLG--RMGRLIIV 284 (359)
T ss_dssp EEEEEESSCC------H---HHHHHGGGGEE--EEEEEEEC
T ss_pred CcEEEECCCC------c---hHHHHHHHhhc--CCCEEEEE
Confidence 9999865331 1 2 55566666 89988776
No 402
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=88.92 E-value=2.1 Score=31.58 Aligned_cols=99 Identities=12% Similarity=0.096 Sum_probs=53.4
Q ss_pred CCCcEEEeCCCc-c-HHHHHHHHhCCCcEEEEeCChHHHHHHHHHHH-hhCCCCCCcce-eeccCCCCCCCCCCCccEEE
Q 030558 8 ERRRCIELGSGT-G-ALAIFLRKAMNLDITTSDYNDQEIEDNIAYNS-TTNGITPALPH-IKHSWGDAFPIPNPDWDLIL 83 (175)
Q Consensus 8 ~~~~vLDlGcG~-G-~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~fD~i~ 83 (175)
...+|.=||+|. | .++..+++. +.+|+.+ .+++.+ +.+++.. ..... .... ......++.. ....+|+|+
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~-G~~V~l~-~~~~~~-~~i~~~g~~~~~~--~~~~~~~~~~~~~~~-~~~~~D~vi 91 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARA-GHEVILI-ARPQHV-QAIEATGLRLETQ--SFDEQVKVSASSDPS-AVQGADLVL 91 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHT-TCEEEEE-CCHHHH-HHHHHHCEEEECS--SCEEEECCEEESCGG-GGTTCSEEE
T ss_pred cCCcEEEECcCHHHHHHHHHHHHC-CCeEEEE-EcHhHH-HHHHhCCeEEEcC--CCcEEEeeeeeCCHH-HcCCCCEEE
Confidence 457899999986 4 344556554 7889999 887665 4443321 11000 0000 0000011111 124689988
Q ss_pred eCCcccCcccchHHHHHHHHHHhhcCCCCceeecc
Q 030558 84 ASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHL 118 (175)
Q Consensus 84 ~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~ 118 (175)
..--- ..+..+++++...++|+..++...
T Consensus 92 lavk~------~~~~~~l~~l~~~l~~~~~iv~~~ 120 (318)
T 3hwr_A 92 FCVKS------TDTQSAALAMKPALAKSALVLSLQ 120 (318)
T ss_dssp ECCCG------GGHHHHHHHHTTTSCTTCEEEEEC
T ss_pred EEccc------ccHHHHHHHHHHhcCCCCEEEEeC
Confidence 75322 145588889988888886555443
No 403
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=88.59 E-value=0.56 Score=34.35 Aligned_cols=91 Identities=16% Similarity=0.183 Sum_probs=52.7
Q ss_pred ccCCCcEEEeCCCc-cHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEe
Q 030558 6 WIERRRCIELGSGT-GALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILA 84 (175)
Q Consensus 6 ~~~~~~vLDlGcG~-G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~ 84 (175)
.+.+++|+=+|+|. |......++..+.+|+++|.++... +.+.. .+. ..... ..+...-...|+|+.
T Consensus 154 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~-~~~~~----~g~----~~~~~---~~l~~~l~~aDvVi~ 221 (300)
T 2rir_A 154 TIHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHL-ARITE----MGL----VPFHT---DELKEHVKDIDICIN 221 (300)
T ss_dssp CSTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHH----TTC----EEEEG---GGHHHHSTTCSEEEE
T ss_pred CCCCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHH----CCC----eEEch---hhHHHHhhCCCEEEE
Confidence 45789999999985 6666655566688999999988654 22221 122 11111 111111235799988
Q ss_pred CCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 85 SDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 85 ~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
+-.. +.. . ++..+.++|++.++-+
T Consensus 222 ~~p~-~~i--~------~~~~~~mk~g~~lin~ 245 (300)
T 2rir_A 222 TIPS-MIL--N------QTVLSSMTPKTLILDL 245 (300)
T ss_dssp CCSS-CCB--C------HHHHTTSCTTCEEEEC
T ss_pred CCCh-hhh--C------HHHHHhCCCCCEEEEE
Confidence 7554 211 1 2345778998755443
No 404
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=88.53 E-value=0.66 Score=33.86 Aligned_cols=39 Identities=15% Similarity=0.128 Sum_probs=30.3
Q ss_pred ccCCCcEEEeCCCc-cHHHHHHHHhCCCcEEEEeCChHHH
Q 030558 6 WIERRRCIELGSGT-GALAIFLRKAMNLDITTSDYNDQEI 44 (175)
Q Consensus 6 ~~~~~~vLDlGcG~-G~~~~~l~~~~~~~v~~~D~s~~~l 44 (175)
.+.+++|+=+|+|. |......++..|.+|+++|.++...
T Consensus 152 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~ 191 (293)
T 3d4o_A 152 TIHGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLL 191 (293)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred CCCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence 35789999999985 6666665566688999999988654
No 405
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=88.36 E-value=2.6 Score=29.94 Aligned_cols=89 Identities=13% Similarity=0.128 Sum_probs=49.9
Q ss_pred CCcEEEeCCCc-cHH-HHHHHHhCCCc-EEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeC
Q 030558 9 RRRCIELGSGT-GAL-AIFLRKAMNLD-ITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILAS 85 (175)
Q Consensus 9 ~~~vLDlGcG~-G~~-~~~l~~~~~~~-v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~ 85 (175)
+.+|.=||+|. |.. +..+++. +.+ |+.+|.+++.+ +.+.... +. . .. ......-...|+|+..
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~-g~~~v~~~~~~~~~~-~~~~~~~---g~----~-~~----~~~~~~~~~~Dvvi~a 75 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRK-GFRIVQVYSRTEESA-RELAQKV---EA----E-YT----TDLAEVNPYAKLYIVS 75 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSHHHH-HHHHHHT---TC----E-EE----SCGGGSCSCCSEEEEC
T ss_pred CCeEEEEcCCHHHHHHHHHHHHC-CCeEEEEEeCCHHHH-HHHHHHc---CC----c-ee----CCHHHHhcCCCEEEEe
Confidence 45788899975 433 3445444 677 89999998776 3333221 12 1 11 1111111357998875
Q ss_pred CcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
-.- .....+++++...++++..++-.
T Consensus 76 v~~------~~~~~v~~~l~~~~~~~~ivv~~ 101 (266)
T 3d1l_A 76 LKD------SAFAELLQGIVEGKREEALMVHT 101 (266)
T ss_dssp CCH------HHHHHHHHHHHTTCCTTCEEEEC
T ss_pred cCH------HHHHHHHHHHHhhcCCCcEEEEC
Confidence 332 13457788888778777544433
No 406
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=88.24 E-value=1.7 Score=31.24 Aligned_cols=87 Identities=17% Similarity=0.171 Sum_probs=47.8
Q ss_pred cEEEeCCCc-cHH-HHHHHHhCCC--cEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCC-CccEEEeC
Q 030558 11 RCIELGSGT-GAL-AIFLRKAMNL--DITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNP-DWDLILAS 85 (175)
Q Consensus 11 ~vLDlGcG~-G~~-~~~l~~~~~~--~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~fD~i~~~ 85 (175)
+|.=||+|. |.. +..+++. +. +|+++|.+++.+ +.+.. .+.. .... .+....-. ..|+|+.+
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~-g~~~~V~~~d~~~~~~-~~~~~----~g~~---~~~~----~~~~~~~~~~aDvVila 69 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRS-GFKGKIYGYDINPESI-SKAVD----LGII---DEGT----TSIAKVEDFSPDFVMLS 69 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-TCCSEEEEECSCHHHH-HHHHH----TTSC---SEEE----SCGGGGGGTCCSEEEEC
T ss_pred EEEEEecCHHHHHHHHHHHhc-CCCcEEEEEeCCHHHH-HHHHH----CCCc---cccc----CCHHHHhcCCCCEEEEc
Confidence 566788875 443 3444443 55 799999998765 33321 1220 0011 11111112 57888875
Q ss_pred CcccCcccchHHHHHHHHHHhhcCCCCceee
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKPKDSQVG 116 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~ 116 (175)
-.. .....+++++...++++..++.
T Consensus 70 vp~------~~~~~v~~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 70 SPV------RTFREIAKKLSYILSEDATVTD 94 (281)
T ss_dssp SCH------HHHHHHHHHHHHHSCTTCEEEE
T ss_pred CCH------HHHHHHHHHHHhhCCCCcEEEE
Confidence 322 2344778888888888864443
No 407
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=87.92 E-value=2.8 Score=32.79 Aligned_cols=100 Identities=19% Similarity=0.148 Sum_probs=54.7
Q ss_pred CcEEEeCCCc--cHHHHHHHHhCCCcEEEEeCChHHHHH----HHHHHHhhCCCCC-----CcceeeccCCCCCCCCCCC
Q 030558 10 RRCIELGSGT--GALAIFLRKAMNLDITTSDYNDQEIED----NIAYNSTTNGITP-----ALPHIKHSWGDAFPIPNPD 78 (175)
Q Consensus 10 ~~vLDlGcG~--G~~~~~l~~~~~~~v~~~D~s~~~l~~----~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 78 (175)
++|.=||+|+ +.++..+++. |.+|+++|.+++.... ++++......... ....+. ...++. .-..
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~a-G~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~--~t~dl~-al~~ 130 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLA-GIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLK--ITSDFH-KLSN 130 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEE--EESCGG-GCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceE--EeCCHH-HHcc
Confidence 5688889986 4445566555 8899999999973212 2222222211100 000111 111222 1235
Q ss_pred ccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 79 WDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 79 fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
.|+|+.+-. ++..-...+++++...++|+..+...
T Consensus 131 aDlVIeAVp----e~~~vk~~v~~~l~~~~~~~aIlasn 165 (460)
T 3k6j_A 131 CDLIVESVI----EDMKLKKELFANLENICKSTCIFGTN 165 (460)
T ss_dssp CSEEEECCC----SCHHHHHHHHHHHHTTSCTTCEEEEC
T ss_pred CCEEEEcCC----CCHHHHHHHHHHHHhhCCCCCEEEec
Confidence 799887532 23333457889999999998755433
No 408
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=87.08 E-value=1.8 Score=27.39 Aligned_cols=37 Identities=22% Similarity=0.222 Sum_probs=24.8
Q ss_pred CCCcEEEeCCCc-cHHHHHHHHhCCCcEEEEeCChHHH
Q 030558 8 ERRRCIELGSGT-GALAIFLRKAMNLDITTSDYNDQEI 44 (175)
Q Consensus 8 ~~~~vLDlGcG~-G~~~~~l~~~~~~~v~~~D~s~~~l 44 (175)
..++|+=+|+|. |..........+.+|+++|.+++.+
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~ 42 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKI 42 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHH
Confidence 346899999975 4433222233388999999999776
No 409
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=86.99 E-value=1.5 Score=31.98 Aligned_cols=88 Identities=17% Similarity=0.069 Sum_probs=47.3
Q ss_pred CCcEEEeCCCc-cH-HHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCC
Q 030558 9 RRRCIELGSGT-GA-LAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASD 86 (175)
Q Consensus 9 ~~~vLDlGcG~-G~-~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~ 86 (175)
..+|.=||+|. |. ++..+++. |.+|+++|.+++.+ +.+... +. .... ......-...|+|+..-
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~-G~~V~~~dr~~~~~-~~~~~~----g~----~~~~----~~~~e~~~~aDvvi~~v 72 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRA-GLSTWGADLNPQAC-ANLLAE----GA----CGAA----ASAREFAGVVDALVILV 72 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHH-HHHHHT----TC----SEEE----SSSTTTTTTCSEEEECC
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCeEEEEECCHHHH-HHHHHc----CC----cccc----CCHHHHHhcCCEEEEEC
Confidence 35688888885 44 33445444 78999999999776 333221 22 0101 11111123458887742
Q ss_pred cccCcccchHHHHHH---HHHHhhcCCCCcee
Q 030558 87 ILLYVKQYSNLIKSL---SVLLKSYKPKDSQV 115 (175)
Q Consensus 87 ~l~~~~~~~~~~~~l---~~l~~~l~pgG~~~ 115 (175)
+.......++ +++...++||..++
T Consensus 73 -----p~~~~~~~v~~~~~~l~~~l~~g~ivv 99 (303)
T 3g0o_A 73 -----VNAAQVRQVLFGEDGVAHLMKPGSAVM 99 (303)
T ss_dssp -----SSHHHHHHHHC--CCCGGGSCTTCEEE
T ss_pred -----CCHHHHHHHHhChhhHHhhCCCCCEEE
Confidence 2222334554 55667777765443
No 410
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=86.94 E-value=9.4 Score=29.76 Aligned_cols=96 Identities=17% Similarity=0.185 Sum_probs=52.6
Q ss_pred CcEEEeCCCc-cH-HHHHHHHhCCCcEEEEeCChHHHHHHHHHHHh--------h---CCC--CCCcceeeccCCCCCCC
Q 030558 10 RRCIELGSGT-GA-LAIFLRKAMNLDITTSDYNDQEIEDNIAYNST--------T---NGI--TPALPHIKHSWGDAFPI 74 (175)
Q Consensus 10 ~~vLDlGcG~-G~-~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~--------~---~~~--~~~~~~~~~~~~~~~~~ 74 (175)
++|.=||+|. |. ++..+++. |.+|+++|.+++.++ .+..... . ... ......+. .+..
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~-G~~V~l~D~~~~~~~-~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~----~~~~- 110 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARV-GISVVAVESDPKQLD-AAKKIITFTLEKEASRAHQNGQASAKPKLRFS----SSTK- 110 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCEEEEECSSHHHHH-HHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEE----SCGG-
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CCeEEEEECCHHHHH-HHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhc----CCHH-
Confidence 5688899987 43 34455554 789999999998763 2222111 0 000 00001111 1111
Q ss_pred CCCCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceee
Q 030558 75 PNPDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVG 116 (175)
Q Consensus 75 ~~~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~ 116 (175)
.-...|+|+.+-. .+..-...+++++...++|+..++.
T Consensus 111 ~~~~aDlVIeaVp----e~~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 111 ELSTVDLVVEAVF----EDMNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp GGTTCSEEEECCC----SCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred HHCCCCEEEEcCC----CCHHHHHHHHHHHHhhCCCCeEEEe
Confidence 1235788887532 2232335788888888988865544
No 411
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=86.85 E-value=1.7 Score=32.04 Aligned_cols=101 Identities=11% Similarity=0.060 Sum_probs=52.0
Q ss_pred CcEEEeCCCc-c-HHHHHHHHhCCCcEEEEeCChHHHHHHHHHH-HhhCC-CCCCcceeeccCCCCCCCCCCCccEEEeC
Q 030558 10 RRCIELGSGT-G-ALAIFLRKAMNLDITTSDYNDQEIEDNIAYN-STTNG-ITPALPHIKHSWGDAFPIPNPDWDLILAS 85 (175)
Q Consensus 10 ~~vLDlGcG~-G-~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~fD~i~~~ 85 (175)
.+|+=||+|. | .++..|++. +.+|+.++.++ . +.++++ ...+. ..............+.......+|+|+..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-g~~V~~~~r~~--~-~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVila 78 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT-GHCVSVVSRSD--Y-ETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLLC 78 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT-TCEEEEECSTT--H-HHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CCeEEEEeCCh--H-HHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEEe
Confidence 4678889986 4 344556554 78899999987 2 333332 11111 10111100001111111112368998875
Q ss_pred CcccCcccchHHHHHHHHHHhhcCCCCceeecccc
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTK 120 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~ 120 (175)
--- .... .+++.+...++++..++....+
T Consensus 79 vK~---~~~~---~~l~~l~~~l~~~t~Iv~~~nG 107 (320)
T 3i83_A 79 IKV---VEGA---DRVGLLRDAVAPDTGIVLISNG 107 (320)
T ss_dssp CCC---CTTC---CHHHHHTTSCCTTCEEEEECSS
T ss_pred cCC---CChH---HHHHHHHhhcCCCCEEEEeCCC
Confidence 333 1122 6778888888888765555333
No 412
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=86.76 E-value=1.8 Score=28.88 Aligned_cols=38 Identities=16% Similarity=0.060 Sum_probs=27.4
Q ss_pred cCCCcEEEeCCCc-cHHHHHHHHhC-CCcEEEEeCChHHH
Q 030558 7 IERRRCIELGSGT-GALAIFLRKAM-NLDITTSDYNDQEI 44 (175)
Q Consensus 7 ~~~~~vLDlGcG~-G~~~~~l~~~~-~~~v~~~D~s~~~l 44 (175)
..+.+|+=+|+|. |.......... +.+|+++|.+++.+
T Consensus 37 ~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~ 76 (183)
T 3c85_A 37 PGHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAA 76 (183)
T ss_dssp CTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHH
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHH
Confidence 4467899999874 55544444444 78899999999775
No 413
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=86.68 E-value=2.3 Score=27.02 Aligned_cols=36 Identities=14% Similarity=0.178 Sum_probs=26.0
Q ss_pred CCcEEEeCCCc-cHHHHHHHHhCCCcEEEEeCChHHH
Q 030558 9 RRRCIELGSGT-GALAIFLRKAMNLDITTSDYNDQEI 44 (175)
Q Consensus 9 ~~~vLDlGcG~-G~~~~~l~~~~~~~v~~~D~s~~~l 44 (175)
..+|+=+|||. |..........+.+|+++|.+++.+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~ 43 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRV 43 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHH
Confidence 45788899875 5544433344488999999999876
No 414
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=86.64 E-value=3.1 Score=30.13 Aligned_cols=99 Identities=18% Similarity=0.099 Sum_probs=51.0
Q ss_pred CcEEEeCCCc-cHH-HHHHHHhCCCcEEEEeCChHHHHHHHHHHH-hhCCCCCCcceeeccCCCCCCCCC--CCccEEEe
Q 030558 10 RRCIELGSGT-GAL-AIFLRKAMNLDITTSDYNDQEIEDNIAYNS-TTNGITPALPHIKHSWGDAFPIPN--PDWDLILA 84 (175)
Q Consensus 10 ~~vLDlGcG~-G~~-~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~fD~i~~ 84 (175)
.+|.=||+|. |.. +..+++. +.+|+++|.+++.+ +.+.+.. ..... ...........+...... ...|+|+.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~r~~~~~-~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 80 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG-GNDVTLIDQWPAHI-EAIRKNGLIADFN-GEEVVANLPIFSPEEIDHQNEQVDLIIA 80 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHH-HHHHHHCEEEEET-TEEEEECCCEECGGGCCTTSCCCSEEEE
T ss_pred CeEEEECcCHHHHHHHHHHHhC-CCcEEEEECCHHHH-HHHHhCCEEEEeC-CCeeEecceeecchhhcccCCCCCEEEE
Confidence 3688889875 433 3445444 77899999998776 3333221 00000 000000000001101111 26799887
Q ss_pred CCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 85 SDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 85 ~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
.-- ......+++++...++|+..++..
T Consensus 81 ~v~------~~~~~~v~~~l~~~l~~~~~iv~~ 107 (316)
T 2ew2_A 81 LTK------AQQLDAMFKAIQPMITEKTYVLCL 107 (316)
T ss_dssp CSC------HHHHHHHHHHHGGGCCTTCEEEEC
T ss_pred Eec------cccHHHHHHHHHHhcCCCCEEEEe
Confidence 532 224557888888888887655444
No 415
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=86.64 E-value=0.43 Score=30.81 Aligned_cols=43 Identities=23% Similarity=0.302 Sum_probs=28.5
Q ss_pred CCCCCCCccEEEeCCccc-CcccchHHHHHHHHHHhhcCCCCceee
Q 030558 72 FPIPNPDWDLILASDILL-YVKQYSNLIKSLSVLLKSYKPKDSQVG 116 (175)
Q Consensus 72 ~~~~~~~fD~i~~~~~l~-~~~~~~~~~~~l~~l~~~l~pgG~~~~ 116 (175)
..++.++||.|+...--- .....+ ..+++.+++.|||||.|.-
T Consensus 53 VsLp~stYD~V~~lt~~~~~~~~l~--r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 53 ITLENAKYETVHYLTPEAQTDIKFP--KKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp CCCCSSSCCSEEEECCCSSCSCCCC--HHHHHHHHTTCCTTCCEEC
T ss_pred ccCCcccccEEEEecCCccchhhcC--HHHHHHHHHHhCCCCEEEe
Confidence 356778999887632110 001111 4999999999999997764
No 416
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=86.63 E-value=4.9 Score=28.36 Aligned_cols=108 Identities=10% Similarity=-0.035 Sum_probs=58.4
Q ss_pred cCCCcEEEeCCC--c--cH-HHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCC-------
Q 030558 7 IERRRCIELGSG--T--GA-LAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPI------- 74 (175)
Q Consensus 7 ~~~~~vLDlGcG--~--G~-~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 74 (175)
++++++|=.|++ . |. ++..+++. |.+|+.++.++... +..+......+. .++..+..+..+....
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~-G~~V~~~~r~~~~~-~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~ 81 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEA-GARLIFTYAGERLE-KSVHELAGTLDR-NDSIILPCDVTNDAEIETCFASI 81 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHT-TCEEEEEESSGGGH-HHHHHHHHTSSS-CCCEEEECCCSSSHHHHHHHHHH
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHC-CCEEEEecCchHHH-HHHHHHHHhcCC-CCceEEeCCCCCHHHHHHHHHHH
Confidence 568889988875 2 32 23445454 88999999887553 333333332221 1344455555432211
Q ss_pred --CCCCccEEEeCCcccC---------cccchHHH-----------HHHHHHHhhcCCCCceeec
Q 030558 75 --PNPDWDLILASDILLY---------VKQYSNLI-----------KSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 75 --~~~~fD~i~~~~~l~~---------~~~~~~~~-----------~~l~~l~~~l~pgG~~~~~ 117 (175)
.-+..|+++.+..+.. ..+.+++. .+++.+...++++|+++.+
T Consensus 82 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~i 146 (266)
T 3oig_A 82 KEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTL 146 (266)
T ss_dssp HHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEE
T ss_pred HHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEE
Confidence 0136788887655422 11112222 3455666777777877665
No 417
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=86.57 E-value=1.2 Score=32.39 Aligned_cols=87 Identities=18% Similarity=0.126 Sum_probs=50.4
Q ss_pred CCcEEEeCCCc-cH-HHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCC
Q 030558 9 RRRCIELGSGT-GA-LAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASD 86 (175)
Q Consensus 9 ~~~vLDlGcG~-G~-~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~ 86 (175)
..+|.=||+|. |. ++..+++. +.+|+++|.+++.+ +.+... +. .. .+.....-. .|+|+..-
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~-G~~V~~~dr~~~~~-~~~~~~----g~----~~-----~~~~~~~~~-aDvvi~~v 78 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEW-PGGVTVYDIRIEAM-TPLAEA----GA----TL-----ADSVADVAA-ADLIHITV 78 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTS-TTCEEEECSSTTTS-HHHHHT----TC----EE-----CSSHHHHTT-SSEEEECC
T ss_pred CCeEEEECcCHHHHHHHHHHHHC-CCeEEEEeCCHHHH-HHHHHC----CC----EE-----cCCHHHHHh-CCEEEEEC
Confidence 35788899886 54 33445443 78899999999775 333221 22 00 011111112 68888742
Q ss_pred cccCcccchHHHHHHHHHHhhcCCCCceee
Q 030558 87 ILLYVKQYSNLIKSLSVLLKSYKPKDSQVG 116 (175)
Q Consensus 87 ~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~ 116 (175)
+.......+++++...++||..++-
T Consensus 79 -----p~~~~~~~v~~~l~~~l~~g~ivv~ 103 (296)
T 3qha_A 79 -----LDDAQVREVVGELAGHAKPGTVIAI 103 (296)
T ss_dssp -----SSHHHHHHHHHHHHTTCCTTCEEEE
T ss_pred -----CChHHHHHHHHHHHHhcCCCCEEEE
Confidence 3233455778888888888764443
No 418
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=86.50 E-value=4.6 Score=31.79 Aligned_cols=101 Identities=13% Similarity=0.091 Sum_probs=53.9
Q ss_pred CcEEEeCCCc-c-HHHHHHHHhCCCcEEEEeCChHHHHHHHHH---HHhhCCCCCCccee-------eccCCCCCCCCCC
Q 030558 10 RRCIELGSGT-G-ALAIFLRKAMNLDITTSDYNDQEIEDNIAY---NSTTNGITPALPHI-------KHSWGDAFPIPNP 77 (175)
Q Consensus 10 ~~vLDlGcG~-G-~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~---~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 77 (175)
++|-=||+|+ | .++..+++. |.+|+++|.+++.+++..+. +.........+... .+....+.. .-.
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~a-G~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~~~ 83 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASH-GHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIH-ALA 83 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGG-GGG
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHH-Hhc
Confidence 4677788886 3 445556555 88999999999887432221 11111000001000 000111111 123
Q ss_pred CccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceee
Q 030558 78 DWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVG 116 (175)
Q Consensus 78 ~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~ 116 (175)
.-|+|+.+-. ++......+++++...++|+..++.
T Consensus 84 ~aDlVIeAVp----e~~~vk~~v~~~l~~~~~~~~Ilas 118 (483)
T 3mog_A 84 AADLVIEAAS----ERLEVKKALFAQLAEVCPPQTLLTT 118 (483)
T ss_dssp GCSEEEECCC----CCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CCCEEEEcCC----CcHHHHHHHHHHHHHhhccCcEEEe
Confidence 4688887532 2223345888999999999875544
No 419
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=86.41 E-value=5.9 Score=28.15 Aligned_cols=108 Identities=11% Similarity=0.106 Sum_probs=58.2
Q ss_pred cccCCCcEEEeCCCccHHHHH----HHHhCCCcEEEEeCCh-HHHHHHHHHHHhhCCCCCCcceeeccCCCCCCC-----
Q 030558 5 EWIERRRCIELGSGTGALAIF----LRKAMNLDITTSDYND-QEIEDNIAYNSTTNGITPALPHIKHSWGDAFPI----- 74 (175)
Q Consensus 5 ~~~~~~~vLDlGcG~G~~~~~----l~~~~~~~v~~~D~s~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 74 (175)
..++++++|=-|++.| ++.. |++. |.+|+.++.+. ..+ +.........+. .+..+..+..+....
T Consensus 14 ~~l~~k~~lVTGas~g-IG~aia~~l~~~-G~~V~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~ 88 (270)
T 3is3_A 14 GRLDGKVALVTGSGRG-IGAAVAVHLGRL-GAKVVVNYANSTKDA-EKVVSEIKALGS--DAIAIKADIRQVPEIVKLFD 88 (270)
T ss_dssp TCCTTCEEEESCTTSH-HHHHHHHHHHHT-TCEEEEEESSCHHHH-HHHHHHHHHTTC--CEEEEECCTTSHHHHHHHHH
T ss_pred CCcCCCEEEEECCCch-HHHHHHHHHHHC-CCEEEEEcCCCHHHH-HHHHHHHHhcCC--cEEEEEcCCCCHHHHHHHHH
Confidence 3467888888886544 3443 4444 88999887754 333 333333333222 334444444431110
Q ss_pred ----CCCCccEEEeCCcccCcc-----cchHH-----------HHHHHHHHhhcCCCCceeec
Q 030558 75 ----PNPDWDLILASDILLYVK-----QYSNL-----------IKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 75 ----~~~~fD~i~~~~~l~~~~-----~~~~~-----------~~~l~~l~~~l~pgG~~~~~ 117 (175)
.-+..|+++.+..+.... +.+++ ..+.+.+.+.++++|+++..
T Consensus 89 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~i 151 (270)
T 3is3_A 89 QAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLT 151 (270)
T ss_dssp HHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEE
Confidence 013679888765543221 12222 23456677788888877765
No 420
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=86.39 E-value=4.2 Score=29.24 Aligned_cols=80 Identities=8% Similarity=0.093 Sum_probs=43.8
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhC---CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCC-CC---C----
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAM---NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDA-FP---I---- 74 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~---~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~---- 74 (175)
..+++++|=.|++. .++..+++.+ |.+|++++.++..+++..+ .+...+. ..+..+..+..+. .. +
T Consensus 9 ~~~~k~vlITGas~-GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~-~l~~~~~-~~~~~~~~Dl~~~~~~v~~~~~~~ 85 (311)
T 3o26_A 9 VTKRRCAVVTGGNK-GIGFEICKQLSSNGIMVVLTCRDVTKGHEAVE-KLKNSNH-ENVVFHQLDVTDPIATMSSLADFI 85 (311)
T ss_dssp ---CCEEEESSCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HHHTTTC-CSEEEEECCTTSCHHHHHHHHHHH
T ss_pred cCCCcEEEEecCCc-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHHhcCC-CceEEEEccCCCcHHHHHHHHHHH
Confidence 34577888777654 4454443332 8899999999877633333 3332221 2344455555443 10 0
Q ss_pred --CCCCccEEEeCCcc
Q 030558 75 --PNPDWDLILASDIL 88 (175)
Q Consensus 75 --~~~~fD~i~~~~~l 88 (175)
..+..|+++.+..+
T Consensus 86 ~~~~g~iD~lv~nAg~ 101 (311)
T 3o26_A 86 KTHFGKLDILVNNAGV 101 (311)
T ss_dssp HHHHSSCCEEEECCCC
T ss_pred HHhCCCCCEEEECCcc
Confidence 01468999887765
No 421
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=86.15 E-value=0.94 Score=35.39 Aligned_cols=38 Identities=8% Similarity=0.082 Sum_probs=31.6
Q ss_pred ccCCCcEEEeCCCc-cHHHHHHHHhCCCcEEEEeCChHH
Q 030558 6 WIERRRCIELGSGT-GALAIFLRKAMNLDITTSDYNDQE 43 (175)
Q Consensus 6 ~~~~~~vLDlGcG~-G~~~~~l~~~~~~~v~~~D~s~~~ 43 (175)
.+.|++|+=+|+|. |......++.+|.+|+++|.++..
T Consensus 244 ~L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~ 282 (464)
T 3n58_A 244 MMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPIC 282 (464)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred cccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcch
Confidence 46789999999996 777777777779999999998854
No 422
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=85.91 E-value=6.5 Score=28.22 Aligned_cols=84 Identities=15% Similarity=0.138 Sum_probs=48.8
Q ss_pred CcEEEeCC-Cc-cHH-HHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCC
Q 030558 10 RRCIELGS-GT-GAL-AIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASD 86 (175)
Q Consensus 10 ~~vLDlGc-G~-G~~-~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~ 86 (175)
.+|.=||+ |. |.. +..+++. +.+|+++|.+++.+ +.+.. .+. .. .+ ....-...|+|+..-
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~-g~~V~~~~r~~~~~-~~~~~----~g~----~~-----~~-~~~~~~~aDvVi~av 75 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDS-AHHLAAIEIAPEGR-DRLQG----MGI----PL-----TD-GDGWIDEADVVVLAL 75 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHS-SSEEEEECCSHHHH-HHHHH----TTC----CC-----CC-SSGGGGTCSEEEECS
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-CCEEEEEECCHHHH-HHHHh----cCC----Cc-----CC-HHHHhcCCCEEEEcC
Confidence 47888998 85 443 3445443 77899999998765 33332 122 10 01 111123579988753
Q ss_pred cccCcccchHHHHHHHHHHhhcCCCCcee
Q 030558 87 ILLYVKQYSNLIKSLSVLLKSYKPKDSQV 115 (175)
Q Consensus 87 ~l~~~~~~~~~~~~l~~l~~~l~pgG~~~ 115 (175)
. ......+++++...++|+..++
T Consensus 76 ~------~~~~~~v~~~l~~~l~~~~ivv 98 (286)
T 3c24_A 76 P------DNIIEKVAEDIVPRVRPGTIVL 98 (286)
T ss_dssp C------HHHHHHHHHHHGGGSCTTCEEE
T ss_pred C------chHHHHHHHHHHHhCCCCCEEE
Confidence 2 1235578888888888875443
No 423
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=85.88 E-value=7.6 Score=28.69 Aligned_cols=100 Identities=14% Similarity=0.062 Sum_probs=53.3
Q ss_pred CcEEEeCCCc-c-HHHHHHHHhCCCcEEEEeCChHHHHHHHHHHH----h---hCCCCC-Cccee----eccCCCCCCCC
Q 030558 10 RRCIELGSGT-G-ALAIFLRKAMNLDITTSDYNDQEIEDNIAYNS----T---TNGITP-ALPHI----KHSWGDAFPIP 75 (175)
Q Consensus 10 ~~vLDlGcG~-G-~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~----~---~~~~~~-~~~~~----~~~~~~~~~~~ 75 (175)
++|-=||+|+ | .++..+++. |.+|+++|.+++.++ .+...+ . ..+... ..... .+....++...
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~-G~~V~l~d~~~~~~~-~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~ea 84 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASG-GFRVKLYDIEPRQIT-GALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEA 84 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCEEEECSCHHHHH-HHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHC-CCEEEEEeCCHHHHH-HHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHHH
Confidence 5677888886 3 445556555 889999999998763 332221 1 112100 00000 00111111111
Q ss_pred CCCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCcee
Q 030558 76 NPDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQV 115 (175)
Q Consensus 76 ~~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~ 115 (175)
-..-|+|+.+-. .+......+++++...++|+..++
T Consensus 85 v~~aDlVieavp----e~~~~k~~v~~~l~~~~~~~~Ii~ 120 (319)
T 2dpo_A 85 VEGVVHIQECVP----ENLDLKRKIFAQLDSIVDDRVVLS 120 (319)
T ss_dssp TTTEEEEEECCC----SCHHHHHHHHHHHHTTCCSSSEEE
T ss_pred HhcCCEEEEecc----CCHHHHHHHHHHHHhhCCCCeEEE
Confidence 235688887532 222334578889998998886444
No 424
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=85.77 E-value=5 Score=28.60 Aligned_cols=107 Identities=11% Similarity=0.125 Sum_probs=57.2
Q ss_pred ccCCCcEEEeCCCccHHHHH----HHHhCCCcEEEEeCC------------hHHHHHHHHHHHhhCCCCCCcceeeccCC
Q 030558 6 WIERRRCIELGSGTGALAIF----LRKAMNLDITTSDYN------------DQEIEDNIAYNSTTNGITPALPHIKHSWG 69 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~----l~~~~~~~v~~~D~s------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (175)
.++++++|=-|++.| ++.. |++. |.+|+.+|.+ ...+ +.........+. .+..+..+..
T Consensus 7 ~l~gk~vlVTGas~g-IG~~ia~~l~~~-G~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~D~~ 81 (287)
T 3pxx_A 7 RVQDKVVLVTGGARG-QGRSHAVKLAEE-GADIILFDICHDIETNEYPLATSRDL-EEAGLEVEKTGR--KAYTAEVDVR 81 (287)
T ss_dssp TTTTCEEEEETTTSH-HHHHHHHHHHHT-TCEEEEEECCSCCTTSCSCCCCHHHH-HHHHHHHHHTTS--CEEEEECCTT
T ss_pred ccCCCEEEEeCCCCh-HHHHHHHHHHHC-CCeEEEEcccccccccccchhhhHHH-HHHHHHHHhcCC--ceEEEEccCC
Confidence 356888988887553 3433 4444 8899999987 4444 233333333222 3344444544
Q ss_pred CCCCC---------CCCCccEEEeCCcccCc---ccchHHH-----------HHHHHHHhhcCCCCceeec
Q 030558 70 DAFPI---------PNPDWDLILASDILLYV---KQYSNLI-----------KSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 70 ~~~~~---------~~~~fD~i~~~~~l~~~---~~~~~~~-----------~~l~~l~~~l~pgG~~~~~ 117 (175)
+.... .-+..|+++.+..+... .+.+++. .+++.+.+.++++|.++.+
T Consensus 82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 152 (287)
T 3pxx_A 82 DRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITT 152 (287)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEe
Confidence 32110 01367988876654321 1222222 3445566677777876665
No 425
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=85.53 E-value=0.47 Score=35.23 Aligned_cols=45 Identities=20% Similarity=0.275 Sum_probs=33.0
Q ss_pred CCCCCccEEEeCCcccCccc------------chHHHHHHHHHHhhcCCCCceeeccc
Q 030558 74 IPNPDWDLILASDILLYVKQ------------YSNLIKSLSVLLKSYKPKDSQVGHLT 119 (175)
Q Consensus 74 ~~~~~fD~i~~~~~l~~~~~------------~~~~~~~l~~l~~~l~pgG~~~~~~~ 119 (175)
.++++||+|++.... .... ...+..+++++.++|+|||.+++.+.
T Consensus 29 l~~~svDlI~tDPPY-~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~ 85 (323)
T 1boo_A 29 FPEESISLVMTSPPF-ALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFG 85 (323)
T ss_dssp SCSSCEEEEEECCCC-SSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCCCeeEEEECCCC-CCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEEC
Confidence 346789999997664 2210 12467899999999999999988643
No 426
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=85.34 E-value=1.2 Score=34.70 Aligned_cols=108 Identities=14% Similarity=0.112 Sum_probs=53.7
Q ss_pred ccCCCcEEEeCCCc-cHHH-HHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCC-CCcce--------eeccCCCCCCC
Q 030558 6 WIERRRCIELGSGT-GALA-IFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGIT-PALPH--------IKHSWGDAFPI 74 (175)
Q Consensus 6 ~~~~~~vLDlGcG~-G~~~-~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~-~~~~~--------~~~~~~~~~~~ 74 (175)
....-+|-=||.|. |... ..+++. |.+|+++|++++.+ +.++.. .+... ..... -.+....+...
T Consensus 5 ~~~~~~~~vIGlG~vG~~~A~~La~~-G~~V~~~D~~~~kv-~~l~~g--~~~~~epgl~~~~~~~~~~g~l~~ttd~~e 80 (446)
T 4a7p_A 5 HHGSVRIAMIGTGYVGLVSGACFSDF-GHEVVCVDKDARKI-ELLHQN--VMPIYEPGLDALVASNVKAGRLSFTTDLAE 80 (446)
T ss_dssp --CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCSTTH-HHHTTT--CCSSCCTTHHHHHHHHHHTTCEEEESCHHH
T ss_pred cCCceEEEEEcCCHHHHHHHHHHHHC-CCEEEEEeCCHHHH-HHHhcC--CCCccCCCHHHHHHhhcccCCEEEECCHHH
Confidence 33455677778775 5444 345444 88999999999876 443321 11000 00000 00001111110
Q ss_pred CCCCccEEEeCCcc-----cCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 75 PNPDWDLILASDIL-----LYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 75 ~~~~fD~i~~~~~l-----~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
.-..-|+|+..-.. ...++...+..+++.+.+.+++|..++..
T Consensus 81 a~~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~ 128 (446)
T 4a7p_A 81 GVKDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTK 128 (446)
T ss_dssp HHTTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEEC
T ss_pred HHhcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 11235777765211 11223335778888999999887654443
No 427
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=85.22 E-value=3.6 Score=29.14 Aligned_cols=38 Identities=11% Similarity=0.211 Sum_probs=25.7
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhC---CCcEEEEeCChHHH
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAM---NLDITTSDYNDQEI 44 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~---~~~v~~~D~s~~~l 44 (175)
.++++++|=.|++ |.++..+++.+ |.+|+++|.++..+
T Consensus 4 m~~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~ 44 (267)
T 2gdz_A 4 MVNGKVALVTGAA-QGIGRAFAEALLLKGAKVALVDWNLEAG 44 (267)
T ss_dssp CCTTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred ccCCCEEEEECCC-CcHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 3567888888864 44444433322 88999999988665
No 428
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=84.81 E-value=0.77 Score=35.31 Aligned_cols=46 Identities=13% Similarity=0.015 Sum_probs=34.4
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhC--CCc----EEEEeCChHHHHHHHHHHHh
Q 030558 7 IERRRCIELGSGTGALAIFLRKAM--NLD----ITTSDYNDQEIEDNIAYNST 53 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~--~~~----v~~~D~s~~~l~~~~~~~~~ 53 (175)
++.-+|+|+-||.|..+..+.+.+ ..- |.++|+++.++ +..+.+..
T Consensus 8 ~~~lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~-~ty~~n~~ 59 (403)
T 4dkj_A 8 IKVIKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAI-VSYVAIHS 59 (403)
T ss_dssp CEEEEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHH-HHHHHHHC
T ss_pred cccceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHH-HHHHHHcC
Confidence 344689999999999999886653 123 88899999886 55555544
No 429
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=84.79 E-value=1.2 Score=34.56 Aligned_cols=38 Identities=11% Similarity=0.160 Sum_probs=30.6
Q ss_pred ccCCCcEEEeCCCc-cHHHHHHHHhCCCcEEEEeCChHH
Q 030558 6 WIERRRCIELGSGT-GALAIFLRKAMNLDITTSDYNDQE 43 (175)
Q Consensus 6 ~~~~~~vLDlGcG~-G~~~~~l~~~~~~~v~~~D~s~~~ 43 (175)
.+.|++|.=+|.|. |......++..|.+|+++|+++..
T Consensus 208 ~L~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~ 246 (436)
T 3h9u_A 208 MIAGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPIN 246 (436)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred cccCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhh
Confidence 35689999999886 776666667779999999999854
No 430
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=84.64 E-value=0.74 Score=43.53 Aligned_cols=102 Identities=13% Similarity=0.064 Sum_probs=61.5
Q ss_pred cccCCCcEEEeCC--CccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCC-CCC-CCCCcc
Q 030558 5 EWIERRRCIELGS--GTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDA-FPI-PNPDWD 80 (175)
Q Consensus 5 ~~~~~~~vLDlGc--G~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~fD 80 (175)
...+|.+||=.|+ |.|..++.+|+..|.+|++++.+++.. +.+++....-+....++.-..++.+. .+. ....+|
T Consensus 1664 ~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~-~~l~~~~~~lga~~v~~~~~~~~~~~i~~~t~g~GvD 1742 (2512)
T 2vz8_A 1664 RMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKR-AYLQARFPQLDETCFANSRDTSFEQHVLRHTAGKGVD 1742 (2512)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHCTTCCSTTEEESSSSHHHHHHHHTTTSCCEE
T ss_pred cCCCCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhh-HHHHhhcCCCCceEEecCCCHHHHHHHHHhcCCCCce
Confidence 4557899998864 469999999998899999999988664 44443211111100000000000000 011 123699
Q ss_pred EEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 81 LILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 81 ~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
+|+-+ . . . ..++...++++|+|+++..
T Consensus 1743 vVld~--~---g--~---~~l~~~l~~L~~~Gr~V~i 1769 (2512)
T 2vz8_A 1743 LVLNS--L---A--E---EKLQASVRCLAQHGRFLEI 1769 (2512)
T ss_dssp EEEEC--C---C--H---HHHHHHHTTEEEEEEEEEC
T ss_pred EEEEC--C---C--c---hHHHHHHHhcCCCcEEEEe
Confidence 99863 2 1 2 5688899999999988776
No 431
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=84.34 E-value=1.3 Score=33.18 Aligned_cols=88 Identities=13% Similarity=0.144 Sum_probs=57.1
Q ss_pred CCcEEEeCCCc-cHHHHHHHHhCCCcEEEEeCCh---HHHHHHHHHHHhhCCCCCCcceeeccCCCCCC--C--CCCCcc
Q 030558 9 RRRCIELGSGT-GALAIFLRKAMNLDITTSDYND---QEIEDNIAYNSTTNGITPALPHIKHSWGDAFP--I--PNPDWD 80 (175)
Q Consensus 9 ~~~vLDlGcG~-G~~~~~l~~~~~~~v~~~D~s~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~fD 80 (175)
|++||=+|+|. |..+..+++..|.+|+++|.++ +.+ +.++.. +. ..+ + .+... . ..+.+|
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~-~~~~~~----ga----~~v--~-~~~~~~~~~~~~~~~d 248 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQ-TVIEET----KT----NYY--N-SSNGYDKLKDSVGKFD 248 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHH-HHHHHH----TC----EEE--E-CTTCSHHHHHHHCCEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHH-HHHHHh----CC----cee--c-hHHHHHHHHHhCCCCC
Confidence 89999999964 7777777777788999999987 664 433321 11 111 1 11100 0 014689
Q ss_pred EEEeCCcccCcccchHHHHHH-HHHHhhcCCCCceeec
Q 030558 81 LILASDILLYVKQYSNLIKSL-SVLLKSYKPKDSQVGH 117 (175)
Q Consensus 81 ~i~~~~~l~~~~~~~~~~~~l-~~l~~~l~pgG~~~~~ 117 (175)
+|+.+... . ..+ +...+.++++|+++..
T Consensus 249 ~vid~~g~---~------~~~~~~~~~~l~~~G~iv~~ 277 (366)
T 2cdc_A 249 VIIDATGA---D------VNILGNVIPLLGRNGVLGLF 277 (366)
T ss_dssp EEEECCCC---C------THHHHHHGGGEEEEEEEEEC
T ss_pred EEEECCCC---h------HHHHHHHHHHHhcCCEEEEE
Confidence 99875432 1 245 7888999999988776
No 432
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=84.33 E-value=5.4 Score=28.47 Aligned_cols=79 Identities=11% Similarity=0.162 Sum_probs=47.2
Q ss_pred ccCCCcEEEeCCCccH---HHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCC--------
Q 030558 6 WIERRRCIELGSGTGA---LAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPI-------- 74 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~---~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 74 (175)
.++||++|==|++.|. .+..|++. |.+|+.+|.+++.+ +...+.+...+. +...+..|..+....
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~-Ga~Vv~~~~~~~~~-~~~~~~i~~~g~--~~~~~~~Dvt~~~~v~~~~~~~~ 79 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALN-DSIVVAVELLEDRL-NQIVQELRGMGK--EVLGVKADVSKKKDVEEFVRRTF 79 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHH-HHHHHHHHHTTC--CEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEECCHHHH-HHHHHHHHhcCC--cEEEEEccCCCHHHHHHHHHHHH
Confidence 3578888888876654 22344444 88999999999887 444444444333 334455555432110
Q ss_pred -CCCCccEEEeCCcc
Q 030558 75 -PNPDWDLILASDIL 88 (175)
Q Consensus 75 -~~~~fD~i~~~~~l 88 (175)
.-+..|+++.+.-+
T Consensus 80 ~~~G~iDiLVNNAGi 94 (254)
T 4fn4_A 80 ETYSRIDVLCNNAGI 94 (254)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHcCCCCEEEECCcc
Confidence 12467888876543
No 433
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=84.29 E-value=1.9 Score=28.61 Aligned_cols=32 Identities=25% Similarity=0.297 Sum_probs=27.1
Q ss_pred CCcEEEeCCCccHHHHHHHHhC-CCcEEEEeCC
Q 030558 9 RRRCIELGSGTGALAIFLRKAM-NLDITTSDYN 40 (175)
Q Consensus 9 ~~~vLDlGcG~G~~~~~l~~~~-~~~v~~~D~s 40 (175)
.+-|||+|-|+|+.--.+...+ +..|+++|-.
T Consensus 41 ~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~ 73 (174)
T 3iht_A 41 SGPVYELGLGNGRTYHHLRQHVQGREIYVFERA 73 (174)
T ss_dssp CSCEEEECCTTCHHHHHHHHHCCSSCEEEEESS
T ss_pred CCceEEecCCCChhHHHHHHhCCCCcEEEEEee
Confidence 3569999999999998898766 6789999973
No 434
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=84.21 E-value=1.1 Score=35.33 Aligned_cols=96 Identities=9% Similarity=0.075 Sum_probs=51.3
Q ss_pred ccccCCCcEEEeCCCc-cH-HHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCC-CCC--CC
Q 030558 4 REWIERRRCIELGSGT-GA-LAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFP-IPN--PD 78 (175)
Q Consensus 4 ~~~~~~~~vLDlGcG~-G~-~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~ 78 (175)
...+..++|.=||+|. |. ++..+++. |.+|+++|.+++.+ +.+.......+. .. ..+.. ... +.
T Consensus 10 ~~~~~~~~IgvIGlG~MG~~lA~~La~~-G~~V~v~~r~~~~~-~~l~~~~~~~gi----~~-----~~s~~e~v~~l~~ 78 (480)
T 2zyd_A 10 HHHMSKQQIGVVGMAVMGRNLALNIESR-GYTVSIFNRSREKT-EEVIAENPGKKL----VP-----YYTVKEFVESLET 78 (480)
T ss_dssp -----CBSEEEECCSHHHHHHHHHHHTT-TCCEEEECSSHHHH-HHHHHHSTTSCE----EE-----CSSHHHHHHTBCS
T ss_pred ccccCCCeEEEEccHHHHHHHHHHHHhC-CCeEEEEeCCHHHH-HHHHhhCCCCCe----EE-----eCCHHHHHhCCCC
Confidence 3455667888899886 44 34556554 78999999999776 333322110011 00 01110 000 13
Q ss_pred ccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCcee
Q 030558 79 WDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQV 115 (175)
Q Consensus 79 fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~ 115 (175)
.|+|+..- +.......+++++...++||..++
T Consensus 79 aDvVil~V-----p~~~~v~~vl~~l~~~l~~g~iII 110 (480)
T 2zyd_A 79 PRRILLMV-----KAGAGTDAAIDSLKPYLDKGDIII 110 (480)
T ss_dssp SCEEEECS-----CSSSHHHHHHHHHGGGCCTTCEEE
T ss_pred CCEEEEEC-----CCHHHHHHHHHHHHhhcCCCCEEE
Confidence 68887742 222345588888888888875443
No 435
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=83.95 E-value=2.3 Score=32.23 Aligned_cols=102 Identities=17% Similarity=0.128 Sum_probs=56.9
Q ss_pred cCCCcEEEeCCCc-cHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeC
Q 030558 7 IERRRCIELGSGT-GALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILAS 85 (175)
Q Consensus 7 ~~~~~vLDlGcG~-G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~ 85 (175)
.++++|+=+|+|. |......++..|.+|+++|.++..+ +.++... +. ......... ..+...-...|+|+.+
T Consensus 166 l~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l-~~~~~~~---g~--~~~~~~~~~-~~l~~~l~~aDvVi~~ 238 (377)
T 2vhw_A 166 VEPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKL-RQLDAEF---CG--RIHTRYSSA-YELEGAVKRADLVIGA 238 (377)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHT---TT--SSEEEECCH-HHHHHHHHHCSEEEEC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHH-HHHHHhc---CC--eeEeccCCH-HHHHHHHcCCCEEEEC
Confidence 5789999999975 7777777777788999999999765 3333211 11 000000000 0000001247998874
Q ss_pred CcccCcccchHHHHHHHHHHhhcCCCCceeecc
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHL 118 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~ 118 (175)
-..-.. ..+. -+.++..+.++|||.++-..
T Consensus 239 ~~~p~~-~t~~--li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 239 VLVPGA-KAPK--LVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp CCCTTS-CCCC--CBCHHHHTTSCTTCEEEEGG
T ss_pred CCcCCC-CCcc--eecHHHHhcCCCCcEEEEEe
Confidence 322010 1111 12456778899999776653
No 436
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=83.82 E-value=1.6 Score=32.94 Aligned_cols=42 Identities=7% Similarity=0.102 Sum_probs=31.5
Q ss_pred cCCCcEEEe--CCC-ccHHHHHHHHhCCCcEEEEeCChHHHHHHHH
Q 030558 7 IERRRCIEL--GSG-TGALAIFLRKAMNLDITTSDYNDQEIEDNIA 49 (175)
Q Consensus 7 ~~~~~vLDl--GcG-~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~ 49 (175)
.+|.+||=+ |+| .|..+..+++..|.+|+++|.+++.+ +.++
T Consensus 169 ~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~-~~~~ 213 (379)
T 3iup_A 169 LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQA-DLLK 213 (379)
T ss_dssp HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHH-HHHH
T ss_pred cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHH
Confidence 467889988 444 36777778887789999999998775 4443
No 437
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=83.70 E-value=2.6 Score=30.42 Aligned_cols=87 Identities=10% Similarity=0.055 Sum_probs=49.3
Q ss_pred CCcEEEeCCCc-cH-HHHHHHHhCCC---cEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEE
Q 030558 9 RRRCIELGSGT-GA-LAIFLRKAMNL---DITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLIL 83 (175)
Q Consensus 9 ~~~vLDlGcG~-G~-~~~~l~~~~~~---~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~ 83 (175)
..+|.=||||. |. ++..+++. +. +|+.+|.+++.+ +.+... .+. .. . .+....-...|+|+
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~-g~~~~~V~v~dr~~~~~-~~l~~~---~gi----~~-~----~~~~~~~~~aDvVi 68 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIAN-GYDPNRICVTNRSLDKL-DFFKEK---CGV----HT-T----QDNRQGALNADVVV 68 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHT-TCCGGGEEEECSSSHHH-HHHHHT---TCC----EE-E----SCHHHHHSSCSEEE
T ss_pred CCEEEEEcccHHHHHHHHHHHHC-CCCCCeEEEEeCCHHHH-HHHHHH---cCC----EE-e----CChHHHHhcCCeEE
Confidence 35788899986 43 44555554 55 899999999776 333321 122 11 0 11100012458888
Q ss_pred eCCcccCcccchHHHHHHHHHHhh-cCCCCcee
Q 030558 84 ASDILLYVKQYSNLIKSLSVLLKS-YKPKDSQV 115 (175)
Q Consensus 84 ~~~~l~~~~~~~~~~~~l~~l~~~-l~pgG~~~ 115 (175)
..-- ......+++++... ++++..++
T Consensus 69 lav~------p~~~~~vl~~l~~~~l~~~~iii 95 (280)
T 3tri_A 69 LAVK------PHQIKMVCEELKDILSETKILVI 95 (280)
T ss_dssp ECSC------GGGHHHHHHHHHHHHHTTTCEEE
T ss_pred EEeC------HHHHHHHHHHHHhhccCCCeEEE
Confidence 7532 23455888888887 77664333
No 438
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=83.60 E-value=1.7 Score=37.45 Aligned_cols=42 Identities=19% Similarity=0.283 Sum_probs=33.7
Q ss_pred CCcEEEeCCCccHHHHHHHHhCCC--cEEEEeCChHHHHHHHHHHH
Q 030558 9 RRRCIELGSGTGALAIFLRKAMNL--DITTSDYNDQEIEDNIAYNS 52 (175)
Q Consensus 9 ~~~vLDlGcG~G~~~~~l~~~~~~--~v~~~D~s~~~l~~~~~~~~ 52 (175)
.-+++||-||.|.+++-+.+. |. .+.++|+++... +..+.|.
T Consensus 540 ~l~~iDLFaG~GGlslGl~~A-G~~~vv~avEid~~A~-~ty~~N~ 583 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQA-GISDTLWAIEMWDPAA-QAFRLNN 583 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHH-TSEEEEEEECSSHHHH-HHHHHHC
T ss_pred CCeEEEeccCccHHHHHHHHC-CCCceEEEEECCHHHH-HHHHHhC
Confidence 457999999999999999777 54 588999999886 5555553
No 439
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=83.59 E-value=3.3 Score=31.12 Aligned_cols=101 Identities=15% Similarity=0.141 Sum_probs=53.0
Q ss_pred CCcEEEeCCCc-cH-HHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCccee-eccCCCCCCCCCCCccEEEeC
Q 030558 9 RRRCIELGSGT-GA-LAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHI-KHSWGDAFPIPNPDWDLILAS 85 (175)
Q Consensus 9 ~~~vLDlGcG~-G~-~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~fD~i~~~ 85 (175)
..+|.=||+|. |. ++..+++. +.+|+.+|.+++.+ +.++.........+..... ......+....-...|+|+..
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~-G~~V~l~~r~~~~~-~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVila 106 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARK-GQKVRLWSYESDHV-DEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIV 106 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTT-TCCEEEECSCHHHH-HHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEEC
T ss_pred CCeEEEECccHHHHHHHHHHHHC-CCeEEEEeCCHHHH-HHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEEC
Confidence 35788899986 43 34445444 78899999998776 4443322110000000000 000001111011246888765
Q ss_pred CcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
-. ...+..+++++...++|+..++..
T Consensus 107 Vp------~~~~~~vl~~i~~~l~~~~ivvs~ 132 (356)
T 3k96_A 107 VP------SFAFHEVITRMKPLIDAKTRIAWG 132 (356)
T ss_dssp CC------HHHHHHHHHHHGGGCCTTCEEEEC
T ss_pred CC------HHHHHHHHHHHHHhcCCCCEEEEE
Confidence 22 235668888888888887655444
No 440
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=83.46 E-value=2.1 Score=32.81 Aligned_cols=38 Identities=16% Similarity=0.230 Sum_probs=32.7
Q ss_pred cCCCcEEEeCCCc-cHHHHHHHHhCCCcEEEEeCChHHH
Q 030558 7 IERRRCIELGSGT-GALAIFLRKAMNLDITTSDYNDQEI 44 (175)
Q Consensus 7 ~~~~~vLDlGcG~-G~~~~~l~~~~~~~v~~~D~s~~~l 44 (175)
.++++|+=+|+|. |..+..+++..|.+|+++|.++..+
T Consensus 170 l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~ 208 (401)
T 1x13_A 170 VPPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVK 208 (401)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGH
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHH
Confidence 4689999999986 8888888887888999999999765
No 441
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=82.92 E-value=1.4 Score=36.78 Aligned_cols=42 Identities=21% Similarity=0.262 Sum_probs=32.3
Q ss_pred CCcEEEeCCCccHHHHHHHHhCC------CcEEEEeCChHHHHHHHHHH
Q 030558 9 RRRCIELGSGTGALAIFLRKAMN------LDITTSDYNDQEIEDNIAYN 51 (175)
Q Consensus 9 ~~~vLDlGcG~G~~~~~l~~~~~------~~v~~~D~s~~~l~~~~~~~ 51 (175)
..+|+||=||.|.++.-+.+.++ .-+.++|+++.++ +..+.|
T Consensus 212 ~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~-~Ty~~N 259 (784)
T 4ft4_B 212 TATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFAC-QSLKYN 259 (784)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHH-HHHHHH
T ss_pred CCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHH-HHHHHH
Confidence 35799999999999988866531 2479999999887 555555
No 442
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=82.78 E-value=4.6 Score=28.87 Aligned_cols=83 Identities=8% Similarity=-0.093 Sum_probs=46.5
Q ss_pred cEEEeCCCc-cHHH-HHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCCcc
Q 030558 11 RCIELGSGT-GALA-IFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASDIL 88 (175)
Q Consensus 11 ~vLDlGcG~-G~~~-~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~~l 88 (175)
+|.=||+|. |... ..++ . +.+|+++|.+++.. +.+... +. ... + ....-...|+|+..-.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~-~-g~~V~~~~~~~~~~-~~~~~~----g~----~~~-----~-~~~~~~~~D~vi~~v~- 64 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLA-R-RFPTLVWNRTFEKA-LRHQEE----FG----SEA-----V-PLERVAEARVIFTCLP- 64 (289)
T ss_dssp CEEEECCSTTHHHHHHHHH-T-TSCEEEECSSTHHH-HHHHHH----HC----CEE-----C-CGGGGGGCSEEEECCS-
T ss_pred eEEEEcccHHHHHHHHHHh-C-CCeEEEEeCCHHHH-HHHHHC----CC----ccc-----C-HHHHHhCCCEEEEeCC-
Confidence 577789986 5543 4454 4 78899999998775 333322 11 011 1 1101124688877522
Q ss_pred cCcccchHHHHHHHHHHhhcCCCCcee
Q 030558 89 LYVKQYSNLIKSLSVLLKSYKPKDSQV 115 (175)
Q Consensus 89 ~~~~~~~~~~~~l~~l~~~l~pgG~~~ 115 (175)
.......+++++...+++|..++
T Consensus 65 ----~~~~~~~v~~~l~~~l~~~~~vv 87 (289)
T 2cvz_A 65 ----TTREVYEVAEALYPYLREGTYWV 87 (289)
T ss_dssp ----SHHHHHHHHHHHTTTCCTTEEEE
T ss_pred ----ChHHHHHHHHHHHhhCCCCCEEE
Confidence 12234466777777787775444
No 443
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=82.55 E-value=2 Score=32.41 Aligned_cols=92 Identities=15% Similarity=0.101 Sum_probs=50.0
Q ss_pred ccCCCcEEEeCCCc-cHH-HHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEE
Q 030558 6 WIERRRCIELGSGT-GAL-AIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLIL 83 (175)
Q Consensus 6 ~~~~~~vLDlGcG~-G~~-~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~ 83 (175)
.++..+|.=||+|. |.. +..+++. +.+|+++|.+++.+ +.+.. .+.. . ..+..+... .....|+|+
T Consensus 19 Mm~~mkIgiIGlG~mG~~~A~~L~~~-G~~V~v~dr~~~~~-~~l~~----~g~~----~-~~s~~e~~~-~a~~~DvVi 86 (358)
T 4e21_A 19 YFQSMQIGMIGLGRMGADMVRRLRKG-GHECVVYDLNVNAV-QALER----EGIA----G-ARSIEEFCA-KLVKPRVVW 86 (358)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHH-HHHHT----TTCB----C-CSSHHHHHH-HSCSSCEEE
T ss_pred hhcCCEEEEECchHHHHHHHHHHHhC-CCEEEEEeCCHHHH-HHHHH----CCCE----E-eCCHHHHHh-cCCCCCEEE
Confidence 34567888888875 443 3445444 78999999999776 33321 1220 0 000000000 012358888
Q ss_pred eCCcccCcccchHHHHHHHHHHhhcCCCCcee
Q 030558 84 ASDILLYVKQYSNLIKSLSVLLKSYKPKDSQV 115 (175)
Q Consensus 84 ~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~ 115 (175)
..-.- . ....+++++...+++|..++
T Consensus 87 ~~vp~-----~-~v~~vl~~l~~~l~~g~iiI 112 (358)
T 4e21_A 87 LMVPA-----A-VVDSMLQRMTPLLAANDIVI 112 (358)
T ss_dssp ECSCG-----G-GHHHHHHHHGGGCCTTCEEE
T ss_pred EeCCH-----H-HHHHHHHHHHhhCCCCCEEE
Confidence 75322 2 45578888888888875443
No 444
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=82.48 E-value=9.4 Score=26.23 Aligned_cols=74 Identities=11% Similarity=0.154 Sum_probs=39.9
Q ss_pred cccCCCcEEEeCCCccHHHHHHHHhC---CCcEEEEeCChHHHHHHHHHHHhhCCCCCCc-ceeeccCCCCCCCCCCCcc
Q 030558 5 EWIERRRCIELGSGTGALAIFLRKAM---NLDITTSDYNDQEIEDNIAYNSTTNGITPAL-PHIKHSWGDAFPIPNPDWD 80 (175)
Q Consensus 5 ~~~~~~~vLDlGcG~G~~~~~l~~~~---~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~fD 80 (175)
..+++++||=.|+ +|.++..+++.+ +.+|++++.++..+ +.+... .+ ..+..+..+.+...-+..|
T Consensus 17 ~~l~~~~ilVtGa-tG~iG~~l~~~L~~~G~~V~~~~R~~~~~-~~~~~~--------~~~~~~~~Dl~~~~~~~~~~~D 86 (236)
T 3e8x_A 17 LYFQGMRVLVVGA-NGKVARYLLSELKNKGHEPVAMVRNEEQG-PELRER--------GASDIVVANLEEDFSHAFASID 86 (236)
T ss_dssp ----CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSGGGH-HHHHHT--------TCSEEEECCTTSCCGGGGTTCS
T ss_pred cCcCCCeEEEECC-CChHHHHHHHHHHhCCCeEEEEECChHHH-HHHHhC--------CCceEEEcccHHHHHHHHcCCC
Confidence 3457888997775 455554443332 78999999998765 332211 12 2333343322221223689
Q ss_pred EEEeCCcc
Q 030558 81 LILASDIL 88 (175)
Q Consensus 81 ~i~~~~~l 88 (175)
+|+.+...
T Consensus 87 ~vi~~ag~ 94 (236)
T 3e8x_A 87 AVVFAAGS 94 (236)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 98877665
No 445
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=82.27 E-value=1.8 Score=34.04 Aligned_cols=38 Identities=13% Similarity=0.125 Sum_probs=29.3
Q ss_pred ccCCCcEEEeCCCc-cHHHHHHHHhCCCcEEEEeCChHH
Q 030558 6 WIERRRCIELGSGT-GALAIFLRKAMNLDITTSDYNDQE 43 (175)
Q Consensus 6 ~~~~~~vLDlGcG~-G~~~~~l~~~~~~~v~~~D~s~~~ 43 (175)
.+.|++|.=+|.|. |......++.+|.+|+++|.++..
T Consensus 254 ~l~GktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~ 292 (479)
T 1v8b_A 254 LISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPIC 292 (479)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHH
T ss_pred ccCCCEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhh
Confidence 45789999999885 665555555569999999999854
No 446
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=82.27 E-value=4.9 Score=31.70 Aligned_cols=38 Identities=13% Similarity=0.128 Sum_probs=27.4
Q ss_pred cCCCcEEEeCCCc-cHHHHHHHHhCCCcEEEEeCChHHH
Q 030558 7 IERRRCIELGSGT-GALAIFLRKAMNLDITTSDYNDQEI 44 (175)
Q Consensus 7 ~~~~~vLDlGcG~-G~~~~~l~~~~~~~v~~~D~s~~~l 44 (175)
+.|++++=+|+|. |......++..|.+|+.+|+++...
T Consensus 263 L~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a 301 (488)
T 3ond_A 263 IAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICA 301 (488)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHH
Confidence 5789999999882 4444443344588999999998654
No 447
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=82.01 E-value=0.65 Score=32.86 Aligned_cols=34 Identities=24% Similarity=0.344 Sum_probs=24.2
Q ss_pred CcEEEeCCCc-cH-HHHHHHHhCCC----cEEEEeCChHHH
Q 030558 10 RRCIELGSGT-GA-LAIFLRKAMNL----DITTSDYNDQEI 44 (175)
Q Consensus 10 ~~vLDlGcG~-G~-~~~~l~~~~~~----~v~~~D~s~~~l 44 (175)
.+|.=||||. |. ++..+++. +. +|+++|.+++.+
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~-g~~~~~~V~~~~r~~~~~ 42 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINK-NIVSSNQIICSDLNTANL 42 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TSSCGGGEEEECSCHHHH
T ss_pred CeEEEECccHHHHHHHHHHHhC-CCCCCCeEEEEeCCHHHH
Confidence 4677889885 43 44555554 65 899999999776
No 448
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=81.78 E-value=6.7 Score=28.15 Aligned_cols=89 Identities=19% Similarity=0.207 Sum_probs=48.2
Q ss_pred CCcEEEeCCCc-cH-HHHHHHHhC-CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeC
Q 030558 9 RRRCIELGSGT-GA-LAIFLRKAM-NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILAS 85 (175)
Q Consensus 9 ~~~vLDlGcG~-G~-~~~~l~~~~-~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~ 85 (175)
-.+|.=||+|. |. ++..+++.. +.+|+++|.+++.+ +.+.. .+.. .... .+....-...|+|+..
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~-~~~~~----~g~~---~~~~----~~~~~~~~~aDvVila 73 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSR-DIALE----RGIV---DEAT----ADFKVFAALADVIILA 73 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHH-HHHHH----TTSC---SEEE----SCTTTTGGGCSEEEEC
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHH-HHHHH----cCCc---cccc----CCHHHhhcCCCEEEEc
Confidence 35688889886 33 344555543 56899999998765 33322 1220 0111 1111111346888775
Q ss_pred CcccCcccchHHHHHHHHHHhh-cCCCCcee
Q 030558 86 DILLYVKQYSNLIKSLSVLLKS-YKPKDSQV 115 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~-l~pgG~~~ 115 (175)
-.- .....+++++... ++++..++
T Consensus 74 vp~------~~~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 74 VPI------KKTIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp SCH------HHHHHHHHHHHTSCCCTTCEEE
T ss_pred CCH------HHHHHHHHHHHhcCCCCCCEEE
Confidence 322 2335777777777 77765443
No 449
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=81.56 E-value=2.4 Score=32.98 Aligned_cols=103 Identities=15% Similarity=0.165 Sum_probs=51.1
Q ss_pred CcEEEeCCCc-cHHH-HHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCC-CCCcce--------eeccCCCCCCCCCCC
Q 030558 10 RRCIELGSGT-GALA-IFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGI-TPALPH--------IKHSWGDAFPIPNPD 78 (175)
Q Consensus 10 ~~vLDlGcG~-G~~~-~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~-~~~~~~--------~~~~~~~~~~~~~~~ 78 (175)
.+|.=||+|. |... ..+++. |.+|+++|.+++.+ +.++.. .... ...... -.+....+....-..
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~-G~~V~~~D~~~~~v-~~l~~g--~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~ 78 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL-GANVRCIDTDRNKI-EQLNSG--TIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPE 78 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHH-HHHHHT--CSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGG
T ss_pred CEEEEECcCHHHHHHHHHHHhc-CCEEEEEECCHHHH-HHHHcC--CCcccCCCHHHHHHhhcccCcEEEECCHHHHHhc
Confidence 3677788875 4433 345444 78999999999876 443321 1100 000000 000000111100124
Q ss_pred ccEEEeCCccc----CcccchHHHHHHHHHHhhcCCCCceee
Q 030558 79 WDLILASDILL----YVKQYSNLIKSLSVLLKSYKPKDSQVG 116 (175)
Q Consensus 79 fD~i~~~~~l~----~~~~~~~~~~~l~~l~~~l~pgG~~~~ 116 (175)
.|+|+.+-.-. ..++...+..+++.+.+.+++|..++.
T Consensus 79 aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~ 120 (450)
T 3gg2_A 79 ADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVT 120 (450)
T ss_dssp CSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEE
T ss_pred CCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEE
Confidence 58777643220 112223567888899999988754443
No 450
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=81.52 E-value=6.1 Score=28.25 Aligned_cols=108 Identities=11% Similarity=0.092 Sum_probs=54.9
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhC---CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCC---------
Q 030558 7 IERRRCIELGSGTGALAIFLRKAM---NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPI--------- 74 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~---~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 74 (175)
++++++|=.|++ |.++..+++.+ |.+|++++.++....+.....+...+. ++..+..+..+....
T Consensus 27 ~~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~ 103 (283)
T 1g0o_A 27 LEGKVALVTGAG-RGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGS--DAACVKANVGVVEDIVRMFEEAVK 103 (283)
T ss_dssp CTTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCC--CeEEEEcCCCCHHHHHHHHHHHHH
Confidence 356778777764 44555444433 889999998864321333223332222 233344444321100
Q ss_pred CCCCccEEEeCCcccCcc-----cchHH-----------HHHHHHHHhhcCCCCceeec
Q 030558 75 PNPDWDLILASDILLYVK-----QYSNL-----------IKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 75 ~~~~fD~i~~~~~l~~~~-----~~~~~-----------~~~l~~l~~~l~pgG~~~~~ 117 (175)
.-+..|+++.+..+.... +.+++ ..+++.+.+.++.+|+++..
T Consensus 104 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 162 (283)
T 1g0o_A 104 IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILM 162 (283)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEE
Confidence 013679988776543221 12222 22445666667677777665
No 451
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=81.48 E-value=10 Score=26.52 Aligned_cols=80 Identities=11% Similarity=0.081 Sum_probs=43.8
Q ss_pred cCCCcEEEeCCCccH---HHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCC-CCcceeeccCCCCCCC--------
Q 030558 7 IERRRCIELGSGTGA---LAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGIT-PALPHIKHSWGDAFPI-------- 74 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~---~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-------- 74 (175)
++++++|=.|++.|. ++..|++. |.+|+.+|.++..+++..+ ........ ..+..+..+..+....
T Consensus 5 ~~~k~~lVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 82 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVIAAGLATD-GYRVVLIARSKQNLEKVHD-EIMRSNKHVQEPIVLPLDITDCTKADTEIKDIH 82 (250)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHH-TCEEEEEESCHHHHHHHHH-HHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHH-HHHHhccccCcceEEeccCCCHHHHHHHHHHHH
Confidence 467788888876542 22344444 8899999999987633333 33222111 2233444454431110
Q ss_pred -CCCCccEEEeCCcc
Q 030558 75 -PNPDWDLILASDIL 88 (175)
Q Consensus 75 -~~~~fD~i~~~~~l 88 (175)
.-+..|+++.+..+
T Consensus 83 ~~~g~iD~lvnnAg~ 97 (250)
T 3nyw_A 83 QKYGAVDILVNAAAM 97 (250)
T ss_dssp HHHCCEEEEEECCCC
T ss_pred HhcCCCCEEEECCCc
Confidence 11468998887655
No 452
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=81.13 E-value=1 Score=32.24 Aligned_cols=41 Identities=10% Similarity=0.026 Sum_probs=28.9
Q ss_pred CCCccEEEeCCcccCcc--------c----chHHHHHHHHHHhhcCCCCceeec
Q 030558 76 NPDWDLILASDILLYVK--------Q----YSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 76 ~~~fD~i~~~~~l~~~~--------~----~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
+++||+|+..... ... . ...+...++++.++|+|+|.+++.
T Consensus 21 ~~~vdlI~~DPPY-~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~ 73 (260)
T 1g60_A 21 NKSVQLAVIDPPY-NLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIF 73 (260)
T ss_dssp TTCEEEEEECCCC-SSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccCEEEECCCC-CCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 4578888886654 222 0 124567888999999999988886
No 453
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=81.03 E-value=13 Score=26.49 Aligned_cols=83 Identities=14% Similarity=0.310 Sum_probs=46.8
Q ss_pred CCCccccCCCcEEEeCCCccH---HHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCC----
Q 030558 1 MHHREWIERRRCIELGSGTGA---LAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFP---- 73 (175)
Q Consensus 1 ~~~~~~~~~~~vLDlGcG~G~---~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 73 (175)
|++|-.++|+++|==|++.|. .+..|++. |.+|+.+|.+... +..+ .+...+. +...+..++.+...
T Consensus 1 M~n~f~L~GKvalVTGas~GIG~aiA~~la~~-Ga~Vvi~~r~~~~--~~~~-~~~~~g~--~~~~~~~Dv~d~~~v~~~ 74 (247)
T 4hp8_A 1 MKNPFSLEGRKALVTGANTGLGQAIAVGLAAA-GAEVVCAARRAPD--ETLD-IIAKDGG--NASALLIDFADPLAAKDS 74 (247)
T ss_dssp --CTTCCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCCH--HHHH-HHHHTTC--CEEEEECCTTSTTTTTTS
T ss_pred CcCCcCCCCCEEEEeCcCCHHHHHHHHHHHHc-CCEEEEEeCCcHH--HHHH-HHHHhCC--cEEEEEccCCCHHHHHHH
Confidence 566666789988888876654 22344444 8899999997632 2222 2222222 33445555543221
Q ss_pred CCCCCccEEEeCCccc
Q 030558 74 IPNPDWDLILASDILL 89 (175)
Q Consensus 74 ~~~~~fD~i~~~~~l~ 89 (175)
...+..|+.+.+.-+.
T Consensus 75 ~~~g~iDiLVNNAGi~ 90 (247)
T 4hp8_A 75 FTDAGFDILVNNAGII 90 (247)
T ss_dssp STTTCCCEEEECCCCC
T ss_pred HHhCCCCEEEECCCCC
Confidence 2345789988876543
No 454
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=81.01 E-value=1.2 Score=33.91 Aligned_cols=90 Identities=12% Similarity=0.173 Sum_probs=56.7
Q ss_pred CCcEEEeCCCccHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCCcc
Q 030558 9 RRRCIELGSGTGALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASDIL 88 (175)
Q Consensus 9 ~~~vLDlGcG~G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~~l 88 (175)
+.+||.++-+-|.++..++. ..+++.+.-|-... .. .+.+++.. .. ..........||+|+.-
T Consensus 46 ~~~~l~~n~~~g~~~~~~~~--~~~~~~~~~~~~~~-~~----l~~~~~~~--~~-----~~~~~~~~~~~d~v~~~--- 108 (381)
T 3dmg_A 46 GERALDLNPGVGWGSLPLEG--RMAVERLETSRAAF-RC----LTASGLQA--RL-----ALPWEAAAGAYDLVVLA--- 108 (381)
T ss_dssp SSEEEESSCTTSTTTGGGBT--TBEEEEEECBHHHH-HH----HHHTTCCC--EE-----CCGGGSCTTCEEEEEEE---
T ss_pred CCcEEEecCCCCccccccCC--CCceEEEeCcHHHH-HH----HHHcCCCc--cc-----cCCccCCcCCCCEEEEE---
Confidence 46899999999987766632 35677764444332 23 44555521 11 11122235689998873
Q ss_pred cCcc---cchHHHHHHHHHHhhcCCCCceeec
Q 030558 89 LYVK---QYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 89 ~~~~---~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
++ ........+.++.+.++|||.+++.
T Consensus 109 --~Pk~k~~~~~~~~l~~~~~~l~~g~~i~~~ 138 (381)
T 3dmg_A 109 --LPAGRGTAYVQASLVAAARALRMGGRLYLA 138 (381)
T ss_dssp --CCGGGCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred --CCcchhHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 23 2234668889999999999998877
No 455
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=80.83 E-value=10 Score=29.43 Aligned_cols=104 Identities=18% Similarity=0.198 Sum_probs=52.8
Q ss_pred ccCCCcEEEeCCCc-cHHH-HHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCccee--------eccCCCCCCCC
Q 030558 6 WIERRRCIELGSGT-GALA-IFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHI--------KHSWGDAFPIP 75 (175)
Q Consensus 6 ~~~~~~vLDlGcG~-G~~~-~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 75 (175)
..-|.++-=||.|. |... ..|++. |.+|+++|++++.+ +.++... ..-.......+ .+....+.
T Consensus 8 ~~~~~~~~ViGlGyvGlp~A~~La~~-G~~V~~~D~~~~kv-~~L~~g~-~pi~epgl~~ll~~~~~~g~l~~ttd~--- 81 (431)
T 3ojo_A 8 HHHGSKLTVVGLGYIGLPTSIMFAKH-GVDVLGVDINQQTI-DKLQNGQ-ISIEEPGLQEVYEEVLSSGKLKVSTTP--- 81 (431)
T ss_dssp ----CEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCHHHH-HHHHTTC-CSSCCTTHHHHHHHHHHTTCEEEESSC---
T ss_pred cccCCccEEEeeCHHHHHHHHHHHHC-CCEEEEEECCHHHH-HHHHCCC-CCcCCCCHHHHHHhhcccCceEEeCch---
Confidence 34566777788885 6655 445554 88999999999887 4433210 00000000000 00001111
Q ss_pred CCCccEEEeCCcc-c-----CcccchHHHHHHHHHHhhcCCCCceee
Q 030558 76 NPDWDLILASDIL-L-----YVKQYSNLIKSLSVLLKSYKPKDSQVG 116 (175)
Q Consensus 76 ~~~fD~i~~~~~l-~-----~~~~~~~~~~~l~~l~~~l~pgG~~~~ 116 (175)
..-|+|+.+-.. . ..++...+..+.+.+.+.++||..++.
T Consensus 82 -~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~ 127 (431)
T 3ojo_A 82 -EASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIV 127 (431)
T ss_dssp -CCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEE
T ss_pred -hhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEE
Confidence 235776654221 1 122344566778888889998764443
No 456
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=80.53 E-value=14 Score=26.64 Aligned_cols=107 Identities=15% Similarity=0.045 Sum_probs=57.8
Q ss_pred ccCCCcEEEeCCCcc----H-HHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCC------
Q 030558 6 WIERRRCIELGSGTG----A-LAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPI------ 74 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G----~-~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 74 (175)
.++++++|=.|++.| . ++..+++. |.+|+.++.++... +.++......+ .+..+..+..+....
T Consensus 28 ~l~gk~~lVTGasg~~GIG~aia~~la~~-G~~V~~~~r~~~~~-~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~ 102 (293)
T 3grk_A 28 LLQGKRGLILGVANNRSIAWGIAKAAREA-GAELAFTYQGDALK-KRVEPLAEELG---AFVAGHCDVADAASIDAVFET 102 (293)
T ss_dssp TTTTCEEEEECCCSSSSHHHHHHHHHHHT-TCEEEEEECSHHHH-HHHHHHHHHHT---CEEEEECCTTCHHHHHHHHHH
T ss_pred cCCCCEEEEEcCCCCCcHHHHHHHHHHHC-CCEEEEEcCCHHHH-HHHHHHHHhcC---CceEEECCCCCHHHHHHHHHH
Confidence 357888998887633 2 33445554 88999999987543 33332222211 123444444432110
Q ss_pred ---CCCCccEEEeCCcccC---------cccchHH-----------HHHHHHHHhhcCCCCceeec
Q 030558 75 ---PNPDWDLILASDILLY---------VKQYSNL-----------IKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 75 ---~~~~fD~i~~~~~l~~---------~~~~~~~-----------~~~l~~l~~~l~pgG~~~~~ 117 (175)
.-+..|+++.+..+.. ..+.+++ ..+++.+.+.++++|+++..
T Consensus 103 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~i 168 (293)
T 3grk_A 103 LEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTL 168 (293)
T ss_dssp HHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEE
Confidence 1246899888766532 1112222 23455666777778877665
No 457
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=80.40 E-value=3.4 Score=32.69 Aligned_cols=88 Identities=14% Similarity=0.119 Sum_probs=54.6
Q ss_pred ccCCCcEEEeCCCc-cHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEe
Q 030558 6 WIERRRCIELGSGT-GALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILA 84 (175)
Q Consensus 6 ~~~~~~vLDlGcG~-G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~ 84 (175)
...|++|+=+|+|. |......++..|.+|+++|.++... +.+. ..+. ..+ +..+. -...|+|+.
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~-~~A~----~~Ga----~~~--~l~e~----l~~aDvVi~ 335 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINA-LQAM----MEGF----DVV--TVEEA----IGDADIVVT 335 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHH-HHHH----HTTC----EEC--CHHHH----GGGCSEEEE
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHH----HcCC----EEe--cHHHH----HhCCCEEEE
Confidence 45789999999985 7777777777788999999998664 2222 1122 111 11011 135798887
Q ss_pred CCcccCcccchHHHHHH-HHHHhhcCCCCceeec
Q 030558 85 SDILLYVKQYSNLIKSL-SVLLKSYKPKDSQVGH 117 (175)
Q Consensus 85 ~~~l~~~~~~~~~~~~l-~~l~~~l~pgG~~~~~ 117 (175)
+--- . .++ .+..+.++|||+++.+
T Consensus 336 atgt---~------~~i~~~~l~~mk~ggilvnv 360 (494)
T 3ce6_A 336 ATGN---K------DIIMLEHIKAMKDHAILGNI 360 (494)
T ss_dssp CSSS---S------CSBCHHHHHHSCTTCEEEEC
T ss_pred CCCC---H------HHHHHHHHHhcCCCcEEEEe
Confidence 5322 1 112 3566778999977655
No 458
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=80.14 E-value=3.5 Score=30.53 Aligned_cols=98 Identities=16% Similarity=0.146 Sum_probs=50.5
Q ss_pred CcEEEeCCCc-cHH-HHHHHHhCCCcEEEEeCChHHHHHHHHHHHhh--CCCCCCcc-eeecc-CCCCCCCCCCCccEEE
Q 030558 10 RRCIELGSGT-GAL-AIFLRKAMNLDITTSDYNDQEIEDNIAYNSTT--NGITPALP-HIKHS-WGDAFPIPNPDWDLIL 83 (175)
Q Consensus 10 ~~vLDlGcG~-G~~-~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~--~~~~~~~~-~~~~~-~~~~~~~~~~~fD~i~ 83 (175)
.+|.=||+|. |.. +..+++. +.+|+++|.+++.+ +.++..... .+. ... ..... ..++....-...|+|+
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~-g~~V~~~~r~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~D~vi 80 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK-GQSVLAWDIDAQRI-KEIQDRGAIIAEGP--GLAGTAHPDLLTSDIGLAVKDADVIL 80 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHH-HHHHHHTSEEEESS--SCCEEECCSEEESCHHHHHTTCSEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCHHHH-HHHHhcCCeEEecc--ccccccccceecCCHHHHHhcCCEEE
Confidence 5788899986 433 3445444 77899999998776 443322110 000 000 00000 0011110013579888
Q ss_pred eCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 84 ASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 84 ~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
..--- . ....+++++...++++..++..
T Consensus 81 ~~v~~---~---~~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 81 IVVPA---I---HHASIAANIASYISEGQLIILN 108 (359)
T ss_dssp ECSCG---G---GHHHHHHHHGGGCCTTCEEEES
T ss_pred EeCCc---h---HHHHHHHHHHHhCCCCCEEEEc
Confidence 75332 1 2247788888888887644433
No 459
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=80.14 E-value=3.6 Score=30.14 Aligned_cols=97 Identities=15% Similarity=0.046 Sum_probs=49.8
Q ss_pred CcEEEeCCCc-cH-HHHHHHHhCCCcEEEEeCChHHHHHHHHHHH-hhCCCCCCcceeeccCCCCCCCCCCCccEEEeCC
Q 030558 10 RRCIELGSGT-GA-LAIFLRKAMNLDITTSDYNDQEIEDNIAYNS-TTNGITPALPHIKHSWGDAFPIPNPDWDLILASD 86 (175)
Q Consensus 10 ~~vLDlGcG~-G~-~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~ 86 (175)
.+|+=||+|. |. ++..|++. +.+|+.++.++ . +.+++.. .................+... ....+|+|+..-
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-g~~V~~~~r~~--~-~~i~~~g~~~~~~~g~~~~~~~~~~~~~~-~~~~~D~vilav 77 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS-GEDVHFLLRRD--Y-EAIAGNGLKVFSINGDFTLPHVKGYRAPE-EIGPMDLVLVGL 77 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT-SCCEEEECSTT--H-HHHHHTCEEEEETTCCEEESCCCEESCHH-HHCCCSEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCeEEEEEcCc--H-HHHHhCCCEEEcCCCeEEEeeceeecCHH-HcCCCCEEEEec
Confidence 4688889996 44 44556554 78899999976 2 3333211 000000000000000001111 123689988753
Q ss_pred cccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 87 ILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 87 ~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
-- . ++..+++++...++|+..++..
T Consensus 78 k~---~---~~~~~l~~l~~~l~~~~~iv~l 102 (312)
T 3hn2_A 78 KT---F---ANSRYEELIRPLVEEGTQILTL 102 (312)
T ss_dssp CG---G---GGGGHHHHHGGGCCTTCEEEEC
T ss_pred CC---C---CcHHHHHHHHhhcCCCCEEEEe
Confidence 32 2 2237788888888888765554
No 460
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=79.82 E-value=2.8 Score=31.85 Aligned_cols=39 Identities=21% Similarity=0.266 Sum_probs=32.9
Q ss_pred ccCCCcEEEeCCCc-cHHHHHHHHhCCCcEEEEeCChHHH
Q 030558 6 WIERRRCIELGSGT-GALAIFLRKAMNLDITTSDYNDQEI 44 (175)
Q Consensus 6 ~~~~~~vLDlGcG~-G~~~~~l~~~~~~~v~~~D~s~~~l 44 (175)
..++++|+=+|+|. |..+..+++..|.+|+++|.++...
T Consensus 169 ~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~ 208 (384)
T 1l7d_A 169 TVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATK 208 (384)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 34789999999985 8888888888888999999998664
No 461
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=79.78 E-value=1.1 Score=33.18 Aligned_cols=98 Identities=13% Similarity=0.083 Sum_probs=51.2
Q ss_pred CCcEEEeCCCc-cH-HHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCccee--ecc--CCCCCCCCCCCccEE
Q 030558 9 RRRCIELGSGT-GA-LAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHI--KHS--WGDAFPIPNPDWDLI 82 (175)
Q Consensus 9 ~~~vLDlGcG~-G~-~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~fD~i 82 (175)
..+|.=||+|. |. ++..+++. +.+|+.+|.+ ..+ +.+++ .+.....+.. ... ..++.. ....+|+|
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~-g~~V~~~~r~-~~~-~~~~~----~g~~~~~~~~~~~~~~~~~~~~~-~~~~~D~V 74 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALA-GEAINVLARG-ATL-QALQT----AGLRLTEDGATHTLPVRATHDAA-ALGEQDVV 74 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHT-TCCEEEECCH-HHH-HHHHH----TCEEEEETTEEEEECCEEESCHH-HHCCCSEE
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-CCEEEEEECh-HHH-HHHHH----CCCEEecCCCeEEEeeeEECCHH-HcCCCCEE
Confidence 35788999986 44 34455554 7899999985 333 33322 2221000000 000 001111 11468998
Q ss_pred EeCCcccCcccchHHHHHHHHHHhhcCCCCceeecccc
Q 030558 83 LASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGHLTK 120 (175)
Q Consensus 83 ~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~~~~ 120 (175)
+..-- ..+...+++++...++|+..++.....
T Consensus 75 ilavk------~~~~~~~~~~l~~~l~~~~~iv~~~nG 106 (335)
T 3ghy_A 75 IVAVK------APALESVAAGIAPLIGPGTCVVVAMNG 106 (335)
T ss_dssp EECCC------HHHHHHHHGGGSSSCCTTCEEEECCSS
T ss_pred EEeCC------chhHHHHHHHHHhhCCCCCEEEEECCC
Confidence 87522 124457777777778787655555444
No 462
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=79.68 E-value=14 Score=26.24 Aligned_cols=106 Identities=10% Similarity=0.104 Sum_probs=56.7
Q ss_pred cCCCcEEEeCCCccHHHHH----HHHhCCCcEEEEeCCh-HHHHHHHHHHHhhCCCCCCcceeeccCCCCCCC-------
Q 030558 7 IERRRCIELGSGTGALAIF----LRKAMNLDITTSDYND-QEIEDNIAYNSTTNGITPALPHIKHSWGDAFPI------- 74 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~----l~~~~~~~v~~~D~s~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 74 (175)
++++++|=-|++.| ++.. |++. |.+|+.+|.+. ..+ +.........+. .+..+..+..+....
T Consensus 29 l~gk~~lVTGas~G-IG~aia~~la~~-G~~V~~~~~~~~~~~-~~~~~~l~~~~~--~~~~~~~Dv~d~~~v~~~~~~~ 103 (271)
T 3v2g_A 29 LAGKTAFVTGGSRG-IGAAIAKRLALE-GAAVALTYVNAAERA-QAVVSEIEQAGG--RAVAIRADNRDAEAIEQAIRET 103 (271)
T ss_dssp CTTCEEEEETTTSH-HHHHHHHHHHHT-TCEEEEEESSCHHHH-HHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcH-HHHHHHHHHHHC-CCEEEEEeCCCHHHH-HHHHHHHHhcCC--cEEEEECCCCCHHHHHHHHHHH
Confidence 46788888887654 3433 4444 88899987654 333 333333333222 334444444332110
Q ss_pred --CCCCccEEEeCCcccCcc-----cchHH-----------HHHHHHHHhhcCCCCceeec
Q 030558 75 --PNPDWDLILASDILLYVK-----QYSNL-----------IKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 75 --~~~~fD~i~~~~~l~~~~-----~~~~~-----------~~~l~~l~~~l~pgG~~~~~ 117 (175)
.-+..|+++.+..+.... +.+++ ..+++.+.+.++++|.++..
T Consensus 104 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~i 164 (271)
T 3v2g_A 104 VEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITI 164 (271)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 113679888766542221 11222 23456677778888877765
No 463
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=79.19 E-value=2.5 Score=31.11 Aligned_cols=88 Identities=17% Similarity=0.154 Sum_probs=48.2
Q ss_pred CCcEEEeCCCc-cHH-HHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCC
Q 030558 9 RRRCIELGSGT-GAL-AIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASD 86 (175)
Q Consensus 9 ~~~vLDlGcG~-G~~-~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~ 86 (175)
..+|.=||+|. |.. +..+++. |.+|+++|.+++.+ +.+... +. .. . ......-...|+|+..-
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~-G~~V~~~dr~~~~~-~~l~~~----g~----~~-~----~~~~e~~~~aDvVi~~v 95 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEA-GYALQVWNRTPARA-ASLAAL----GA----TI-H----EQARAAARDADIVVSML 95 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHT-TCEEEEECSCHHHH-HHHHTT----TC----EE-E----SSHHHHHTTCSEEEECC
T ss_pred CCEEEEECccHHHHHHHHHHHhC-CCeEEEEcCCHHHH-HHHHHC----CC----Ee-e----CCHHHHHhcCCEEEEEC
Confidence 35788899986 543 3445444 88999999999775 332211 22 10 0 11110012358877642
Q ss_pred cccCcccchHHHHHHH--HHHhhcCCCCceee
Q 030558 87 ILLYVKQYSNLIKSLS--VLLKSYKPKDSQVG 116 (175)
Q Consensus 87 ~l~~~~~~~~~~~~l~--~l~~~l~pgG~~~~ 116 (175)
+.......++. .+...+++|..++-
T Consensus 96 -----p~~~~~~~v~~~~~~~~~l~~~~~vi~ 122 (320)
T 4dll_A 96 -----ENGAVVQDVLFAQGVAAAMKPGSLFLD 122 (320)
T ss_dssp -----SSHHHHHHHHTTTCHHHHCCTTCEEEE
T ss_pred -----CCHHHHHHHHcchhHHhhCCCCCEEEe
Confidence 22334445665 66667777754443
No 464
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=78.29 E-value=4.8 Score=30.31 Aligned_cols=99 Identities=16% Similarity=0.120 Sum_probs=54.9
Q ss_pred cCCCcEEEeCCCc-cHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCC--CCCCCCCCccEEE
Q 030558 7 IERRRCIELGSGT-GALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGD--AFPIPNPDWDLIL 83 (175)
Q Consensus 7 ~~~~~vLDlGcG~-G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~fD~i~ 83 (175)
.++++|+=+|+|. |......++..|.+|+++|.++..+ +.++... +. . +..+..+ .+...-...|+|+
T Consensus 164 l~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~-~~~~~~~---g~--~---~~~~~~~~~~l~~~~~~~DvVi 234 (369)
T 2eez_A 164 VAPASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRL-QYLDDVF---GG--R---VITLTATEANIKKSVQHADLLI 234 (369)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHT---TT--S---EEEEECCHHHHHHHHHHCSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHH-HHHHHhc---Cc--e---EEEecCCHHHHHHHHhCCCEEE
Confidence 5678999999974 6666666666688999999998765 3333211 11 0 1000000 0000012579988
Q ss_pred eCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 84 ASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 84 ~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
.+-.. .......-+.++..+.++|||.++..
T Consensus 235 ~~~g~---~~~~~~~li~~~~l~~mk~gg~iV~v 265 (369)
T 2eez_A 235 GAVLV---PGAKAPKLVTRDMLSLMKEGAVIVDV 265 (369)
T ss_dssp ECCC----------CCSCHHHHTTSCTTCEEEEC
T ss_pred ECCCC---CccccchhHHHHHHHhhcCCCEEEEE
Confidence 75443 11000012246678889999976665
No 465
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=78.25 E-value=1.3 Score=32.79 Aligned_cols=45 Identities=13% Similarity=0.070 Sum_probs=32.4
Q ss_pred CCCCCccEEEeCCcccCcc---------cchHHHHHHHHHHhhcCCCCceeeccc
Q 030558 74 IPNPDWDLILASDILLYVK---------QYSNLIKSLSVLLKSYKPKDSQVGHLT 119 (175)
Q Consensus 74 ~~~~~fD~i~~~~~l~~~~---------~~~~~~~~l~~l~~~l~pgG~~~~~~~ 119 (175)
.++++||+|+..... ... -...+...+.++.++|+|+|.+++.+.
T Consensus 54 l~~~svDlI~tDPPY-~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~ 107 (319)
T 1eg2_A 54 LPDDSVQLIICDPPY-NIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGG 107 (319)
T ss_dssp SCTTCEEEEEECCCS-BCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CccCCcCEEEECCCC-CCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 345689999997664 221 122466888899999999998888643
No 466
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=78.08 E-value=2.6 Score=30.58 Aligned_cols=34 Identities=26% Similarity=0.330 Sum_probs=24.9
Q ss_pred CcEEEeCCCc-cH-HHHHHHHhCCCcEEEEeCChHHH
Q 030558 10 RRCIELGSGT-GA-LAIFLRKAMNLDITTSDYNDQEI 44 (175)
Q Consensus 10 ~~vLDlGcG~-G~-~~~~l~~~~~~~v~~~D~s~~~l 44 (175)
.+|.=||+|. |. ++..+++. +.+|+++|.+++.+
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~-G~~V~~~d~~~~~~ 39 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKA-GYLLNVFDLVQSAV 39 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-TCEEEEECSSHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHhC-CCeEEEEcCCHHHH
Confidence 4677889986 44 33455554 78999999999776
No 467
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=77.88 E-value=4.6 Score=30.15 Aligned_cols=104 Identities=13% Similarity=0.097 Sum_probs=57.6
Q ss_pred CCcEEEeCCCccHHHHHHHHhC--CCcEEEEeCChHHHHHHHHHHHhhC--------------C--------CCCCccee
Q 030558 9 RRRCIELGSGTGALAIFLRKAM--NLDITTSDYNDQEIEDNIAYNSTTN--------------G--------ITPALPHI 64 (175)
Q Consensus 9 ~~~vLDlGcG~G~~~~~l~~~~--~~~v~~~D~s~~~l~~~~~~~~~~~--------------~--------~~~~~~~~ 64 (175)
.+.|+-||||.=.....+.... +..++=+|..+ .+ +.-++.+... . ...+...+
T Consensus 91 ~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~P~-vi-~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v 168 (334)
T 3iei_A 91 HCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDFPM-IV-TRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVI 168 (334)
T ss_dssp CSEEEEETCTTCCHHHHHHHTTCCCSEEEEEECHH-HH-HHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEE
T ss_pred CCEEEEeCCCcCchHHHhcCCCCCCCeEEECCcHH-HH-HHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEE
Confidence 4679999999877777775531 34566666644 32 2222222110 0 01233344
Q ss_pred eccCCCC---------CCCCCCCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCceee
Q 030558 65 KHSWGDA---------FPIPNPDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVG 116 (175)
Q Consensus 65 ~~~~~~~---------~~~~~~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~ 116 (175)
..+..+. ..+..+..-++++-.+++|.. .+....+++.+.+...+ |.+++
T Consensus 169 ~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~-~~~~~~ll~~ia~~f~~-~~~i~ 227 (334)
T 3iei_A 169 GADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMT-PEQSANLLKWAANSFER-AMFIN 227 (334)
T ss_dssp ECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSC-HHHHHHHHHHHHHHCSS-EEEEE
T ss_pred ccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCC-HHHHHHHHHHHHHhCCC-ceEEE
Confidence 4443221 113334556888888876665 56777888888887655 44444
No 468
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=77.75 E-value=3.3 Score=32.75 Aligned_cols=38 Identities=11% Similarity=0.122 Sum_probs=29.8
Q ss_pred ccCCCcEEEeCCCc-cHHHHHHHHhCCCcEEEEeCChHH
Q 030558 6 WIERRRCIELGSGT-GALAIFLRKAMNLDITTSDYNDQE 43 (175)
Q Consensus 6 ~~~~~~vLDlGcG~-G~~~~~l~~~~~~~v~~~D~s~~~ 43 (175)
.+.|++|.=+|.|. |......++.+|.+|+++|.++..
T Consensus 274 ~L~GktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~ 312 (494)
T 3d64_A 274 MIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPIC 312 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHH
T ss_pred ccCCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHh
Confidence 35789999999885 666666666668999999998854
No 469
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=77.70 E-value=5.4 Score=30.17 Aligned_cols=44 Identities=14% Similarity=0.108 Sum_probs=32.8
Q ss_pred ccCCCcEEEeCCCc-cHHHHHHHHhCCCcEEEEeCChHHHHHHHH
Q 030558 6 WIERRRCIELGSGT-GALAIFLRKAMNLDITTSDYNDQEIEDNIA 49 (175)
Q Consensus 6 ~~~~~~vLDlGcG~-G~~~~~l~~~~~~~v~~~D~s~~~l~~~~~ 49 (175)
.++|++|+=+|+|. |......+...|.+|+.+|+++..+++..+
T Consensus 170 ~L~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~ 214 (364)
T 1leh_A 170 SLEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVA 214 (364)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred CCCcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 46889999999986 666655555568899999999876643433
No 470
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=76.92 E-value=6.9 Score=24.23 Aligned_cols=36 Identities=19% Similarity=0.056 Sum_probs=23.0
Q ss_pred CCcEEEeCCCc-cHHHHHHHHhCCCcEEEEeCChHHH
Q 030558 9 RRRCIELGSGT-GALAIFLRKAMNLDITTSDYNDQEI 44 (175)
Q Consensus 9 ~~~vLDlGcG~-G~~~~~l~~~~~~~v~~~D~s~~~l 44 (175)
+.+|+=+|+|. |..........+.+|+++|.+++.+
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~ 40 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDIC 40 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHH
Confidence 45788888864 4333222223378899999998765
No 471
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=76.50 E-value=17 Score=25.48 Aligned_cols=80 Identities=14% Similarity=0.184 Sum_probs=45.6
Q ss_pred ccCCCcEEEeCC-CccH---HHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCC-------
Q 030558 6 WIERRRCIELGS-GTGA---LAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPI------- 74 (175)
Q Consensus 6 ~~~~~~vLDlGc-G~G~---~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 74 (175)
.++++++|=.|+ |.|. ++..+++. |.+|+.+|.++..++ ........... ..+..+..+..+....
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~~-G~~V~~~~r~~~~~~-~~~~~l~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~ 95 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALLE-GADVVISDYHERRLG-ETRDQLADLGL-GRVEAVVCDVTSTEAVDALITQT 95 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHHT-TCEEEEEESCHHHHH-HHHHHHHTTCS-SCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHC-CCEEEEecCCHHHHH-HHHHHHHhcCC-CceEEEEeCCCCHHHHHHHHHHH
Confidence 357888998887 5543 22445554 889999999987763 33333332221 2344445554432110
Q ss_pred --CCCCccEEEeCCcc
Q 030558 75 --PNPDWDLILASDIL 88 (175)
Q Consensus 75 --~~~~fD~i~~~~~l 88 (175)
.-+..|+++.+..+
T Consensus 96 ~~~~g~id~li~~Ag~ 111 (266)
T 3o38_A 96 VEKAGRLDVLVNNAGL 111 (266)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHhCCCcEEEECCCc
Confidence 01367998887654
No 472
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=76.36 E-value=8.1 Score=27.56 Aligned_cols=79 Identities=13% Similarity=0.170 Sum_probs=46.6
Q ss_pred ccCCCcEEEeCCCccHHHH----HHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCC---------
Q 030558 6 WIERRRCIELGSGTGALAI----FLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAF--------- 72 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~----~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 72 (175)
.++|+++|=-|++.|. +. .|++. |.+|+.+|.+++.+++..+ .+...+. +...+..|..+..
T Consensus 6 ~L~gKvalVTGas~GI-G~aia~~la~~-Ga~Vvi~~~~~~~~~~~~~-~l~~~g~--~~~~~~~Dv~~~~~v~~~~~~~ 80 (255)
T 4g81_D 6 DLTGKTALVTGSARGL-GFAYAEGLAAA-GARVILNDIRATLLAESVD-TLTRKGY--DAHGVAFDVTDELAIEAAFSKL 80 (255)
T ss_dssp CCTTCEEEETTCSSHH-HHHHHHHHHHT-TCEEEECCSCHHHHHHHHH-HHHHTTC--CEEECCCCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHH-HHHHHHHHHHC-CCEEEEEECCHHHHHHHHH-HHHhcCC--cEEEEEeeCCCHHHHHHHHHHH
Confidence 3578888888876543 43 34444 8899999999988744433 3333333 2334444443311
Q ss_pred CCCCCCccEEEeCCccc
Q 030558 73 PIPNPDWDLILASDILL 89 (175)
Q Consensus 73 ~~~~~~fD~i~~~~~l~ 89 (175)
...-+..|+.+.+.-+.
T Consensus 81 ~~~~G~iDiLVNNAG~~ 97 (255)
T 4g81_D 81 DAEGIHVDILINNAGIQ 97 (255)
T ss_dssp HHTTCCCCEEEECCCCC
T ss_pred HHHCCCCcEEEECCCCC
Confidence 01235789888765543
No 473
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=75.20 E-value=14 Score=26.11 Aligned_cols=80 Identities=15% Similarity=0.237 Sum_probs=43.2
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhC---CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCC---------
Q 030558 7 IERRRCIELGSGTGALAIFLRKAM---NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPI--------- 74 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~---~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 74 (175)
++++++|=.|++ |.++..+++.+ |.+|++++.++..+ +.....+...+....+..+..+..+....
T Consensus 30 l~~k~vlVTGas-ggIG~~la~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 107 (279)
T 1xg5_A 30 WRDRLALVTGAS-GGIGAAVARALVQQGLKVVGCARTVGNI-EELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS 107 (279)
T ss_dssp GTTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEECChHHH-HHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence 567888877754 44454444322 88999999998766 33333333322212223334444331110
Q ss_pred CCCCccEEEeCCcc
Q 030558 75 PNPDWDLILASDIL 88 (175)
Q Consensus 75 ~~~~fD~i~~~~~l 88 (175)
.-+.+|+++.+..+
T Consensus 108 ~~g~iD~vi~~Ag~ 121 (279)
T 1xg5_A 108 QHSGVDICINNAGL 121 (279)
T ss_dssp HHCCCSEEEECCCC
T ss_pred hCCCCCEEEECCCC
Confidence 01368988876554
No 474
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=75.18 E-value=2.2 Score=30.75 Aligned_cols=86 Identities=15% Similarity=0.056 Sum_probs=46.1
Q ss_pred CcEEEeCCCc-cHH-HHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeCCc
Q 030558 10 RRCIELGSGT-GAL-AIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILASDI 87 (175)
Q Consensus 10 ~~vLDlGcG~-G~~-~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~~~ 87 (175)
.+|.=||+|. |.. +..+++. +.+|+++|.+++.+ +.+... +. .. .+.....-..-|+|+..-
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~-G~~V~~~dr~~~~~-~~~~~~----g~----~~-----~~~~~~~~~~aDvvi~~v- 65 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA-GCSVTIWNRSPEKA-EELAAL----GA----ER-----AATPCEVVESCPVTFAML- 65 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSGGGG-HHHHHT----TC----EE-----CSSHHHHHHHCSEEEECC-
T ss_pred CEEEEEeecHHHHHHHHHHHHC-CCeEEEEcCCHHHH-HHHHHC----CC----ee-----cCCHHHHHhcCCEEEEEc-
Confidence 4566788875 443 3445444 78999999999776 333221 12 00 011100011347777642
Q ss_pred ccCcccchHHHHHH---HHHHhhcCCCCcee
Q 030558 88 LLYVKQYSNLIKSL---SVLLKSYKPKDSQV 115 (175)
Q Consensus 88 l~~~~~~~~~~~~l---~~l~~~l~pgG~~~ 115 (175)
++......++ +++...+++|..++
T Consensus 66 ----p~~~~~~~v~~~~~~l~~~l~~~~~vi 92 (287)
T 3pef_A 66 ----ADPAAAEEVCFGKHGVLEGIGEGRGYV 92 (287)
T ss_dssp ----SSHHHHHHHHHSTTCHHHHCCTTCEEE
T ss_pred ----CCHHHHHHHHcCcchHhhcCCCCCEEE
Confidence 2233445666 67777788875443
No 475
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=75.04 E-value=22 Score=25.94 Aligned_cols=93 Identities=13% Similarity=0.268 Sum_probs=50.9
Q ss_pred CCCcEEEeCCCc-c-HHHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCCCCCCccEEEeC
Q 030558 8 ERRRCIELGSGT-G-ALAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPIPNPDWDLILAS 85 (175)
Q Consensus 8 ~~~~vLDlGcG~-G-~~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~~ 85 (175)
-.++|-=||+|+ | .++..++ . |.+|+++|.+++.+++..+. . .......+. +.++... -..-|+|+.+
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-a-G~~V~v~d~~~~~~~~~~~~-l----~~~~~~~i~--~~~~~~~-~~~aDlViea 80 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-S-KHEVVLQDVSEKALEAAREQ-I----PEELLSKIE--FTTTLEK-VKDCDIVMEA 80 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-T-TSEEEEECSCHHHHHHHHHH-S----CGGGGGGEE--EESSCTT-GGGCSEEEEC
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-c-CCEEEEEECCHHHHHHHHHH-H----HHHHhCCeE--EeCCHHH-HcCCCEEEEc
Confidence 357788899997 4 4566676 5 88999999999887433332 1 000000111 1122221 2356888875
Q ss_pred CcccCcccchHHHHHHHHHHhhcCCCCceee
Q 030558 86 DILLYVKQYSNLIKSLSVLLKSYKPKDSQVG 116 (175)
Q Consensus 86 ~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~ 116 (175)
-. .+.+-...++.++... |+..+..
T Consensus 81 vp----e~~~vk~~l~~~l~~~--~~~Ilas 105 (293)
T 1zej_A 81 VF----EDLNTKVEVLREVERL--TNAPLCS 105 (293)
T ss_dssp CC----SCHHHHHHHHHHHHTT--CCSCEEE
T ss_pred Cc----CCHHHHHHHHHHHhcC--CCCEEEE
Confidence 32 2222233566776655 7665543
No 476
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=74.86 E-value=4.3 Score=36.14 Aligned_cols=41 Identities=20% Similarity=0.283 Sum_probs=33.2
Q ss_pred CCcEEEeCCCccHHHHHHHHhCCC--cEEEEeCChHHHHHHHHHH
Q 030558 9 RRRCIELGSGTGALAIFLRKAMNL--DITTSDYNDQEIEDNIAYN 51 (175)
Q Consensus 9 ~~~vLDlGcG~G~~~~~l~~~~~~--~v~~~D~s~~~l~~~~~~~ 51 (175)
.-+++||-||.|.+++-+.+. |. .+.++|+++.++ +..+.|
T Consensus 851 ~l~viDLFsG~GGlslGfe~A-G~~~vv~avEid~~A~-~ty~~N 893 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQA-GISETLWAIEMWDPAA-QAFRLN 893 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHT-TSEEEEEEECCSHHHH-HHHHHH
T ss_pred CceEEecccCccHHHHHHHHC-CCCceEEEEECCHHHH-HHHHHh
Confidence 457999999999999999776 54 489999999886 555555
No 477
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=74.85 E-value=5.1 Score=24.98 Aligned_cols=38 Identities=18% Similarity=0.372 Sum_probs=24.2
Q ss_pred cCCCcEEEeCCCc-cHHHHHHHHhCCCcEEEEeCChHHH
Q 030558 7 IERRRCIELGSGT-GALAIFLRKAMNLDITTSDYNDQEI 44 (175)
Q Consensus 7 ~~~~~vLDlGcG~-G~~~~~l~~~~~~~v~~~D~s~~~l 44 (175)
+++++|+=+|+|. |..........+.+|+++|.++..+
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~ 42 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKV 42 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHH
T ss_pred CcCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 3567899999853 4443333333378899999988654
No 478
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=74.66 E-value=14 Score=25.18 Aligned_cols=35 Identities=20% Similarity=0.271 Sum_probs=22.1
Q ss_pred cCCCcEEEeCCCc-cH-HHHHHHHhCCCcEEEEeCChH
Q 030558 7 IERRRCIELGSGT-GA-LAIFLRKAMNLDITTSDYNDQ 42 (175)
Q Consensus 7 ~~~~~vLDlGcG~-G~-~~~~l~~~~~~~v~~~D~s~~ 42 (175)
....+|.=||+|. |. ++..+++. +.+|+.+|.+++
T Consensus 17 ~~~~~I~iiG~G~mG~~la~~l~~~-g~~V~~~~~~~~ 53 (209)
T 2raf_A 17 FQGMEITIFGKGNMGQAIGHNFEIA-GHEVTYYGSKDQ 53 (209)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHT-TCEEEEECTTCC
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHH
Confidence 3467888899875 33 33445443 778999998764
No 479
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=74.00 E-value=6 Score=28.94 Aligned_cols=36 Identities=19% Similarity=0.241 Sum_probs=27.1
Q ss_pred ccCCCcEEEeCCC-ccHHH-HHHHHhCCCcEEEEeCCh
Q 030558 6 WIERRRCIELGSG-TGALA-IFLRKAMNLDITTSDYND 41 (175)
Q Consensus 6 ~~~~~~vLDlGcG-~G~~~-~~l~~~~~~~v~~~D~s~ 41 (175)
.+.+++||=+||| .|... .+|+..+-.+++.+|.+.
T Consensus 33 kL~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 33 KIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GGGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred HHhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 3467899999998 47655 557777556899999876
No 480
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=73.84 E-value=5.5 Score=31.47 Aligned_cols=91 Identities=8% Similarity=0.056 Sum_probs=51.1
Q ss_pred CCcEEEeCCCc-cH-HHHHHHHhCCCcEEEEeCChHHHHHHHHH-HHhhCCCCCCcceeeccCCCCCC-CCC--CCccEE
Q 030558 9 RRRCIELGSGT-GA-LAIFLRKAMNLDITTSDYNDQEIEDNIAY-NSTTNGITPALPHIKHSWGDAFP-IPN--PDWDLI 82 (175)
Q Consensus 9 ~~~vLDlGcG~-G~-~~~~l~~~~~~~v~~~D~s~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~fD~i 82 (175)
..+|-=||+|. |. ++..+++. |.+|+++|.+++.+ +.+.. .....+. . ...... ... ...|+|
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~-G~~V~v~dr~~~~~-~~l~~~~~~~~gi-------~--~~~s~~e~v~~l~~aDvV 78 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADH-GFTVCAYNRTQSKV-DHFLANEAKGKSI-------I--GATSIEDFISKLKRPRKV 78 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSHHH-HHHHHTTTTTSSE-------E--CCSSHHHHHHTSCSSCEE
T ss_pred CCCEEEEeeHHHHHHHHHHHHHC-CCEEEEEeCCHHHH-HHHHcccccCCCe-------E--EeCCHHHHHhcCCCCCEE
Confidence 45788888885 44 44556555 78999999999776 33332 1100011 0 001110 000 135888
Q ss_pred EeCCcccCcccchHHHHHHHHHHhhcCCCCcee
Q 030558 83 LASDILLYVKQYSNLIKSLSVLLKSYKPKDSQV 115 (175)
Q Consensus 83 ~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~ 115 (175)
+..- +.......+++++...++||..++
T Consensus 79 il~V-----p~~~~v~~vl~~l~~~l~~g~iII 106 (497)
T 2p4q_A 79 MLLV-----KAGAPVDALINQIVPLLEKGDIII 106 (497)
T ss_dssp EECC-----CSSHHHHHHHHHHGGGCCTTCEEE
T ss_pred EEEc-----CChHHHHHHHHHHHHhCCCCCEEE
Confidence 7742 323355688888888888875444
No 481
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=73.48 E-value=15 Score=25.87 Aligned_cols=79 Identities=5% Similarity=0.103 Sum_probs=44.4
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhC---CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCC--------
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAM---NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPI-------- 74 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~---~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 74 (175)
.++++++|=.|++ |.++..+++.+ |.+|+++|.++..+ +.........+. .+..+..+..+....
T Consensus 26 ~l~~k~vlITGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~ 101 (262)
T 3rkr_A 26 SLSGQVAVVTGAS-RGIGAAIARKLGSLGARVVLTARDVEKL-RAVEREIVAAGG--EAESHACDLSHSDAIAAFATGVL 101 (262)
T ss_dssp TTTTCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHTTC--EEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHHhCC--ceeEEEecCCCHHHHHHHHHHHH
Confidence 4567888877764 44454444433 88999999999876 344333333222 233444444331110
Q ss_pred -CCCCccEEEeCCcc
Q 030558 75 -PNPDWDLILASDIL 88 (175)
Q Consensus 75 -~~~~fD~i~~~~~l 88 (175)
..+..|+++.+..+
T Consensus 102 ~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 102 AAHGRCDVLVNNAGV 116 (262)
T ss_dssp HHHSCCSEEEECCCC
T ss_pred HhcCCCCEEEECCCc
Confidence 11368988876654
No 482
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=73.20 E-value=1.2 Score=33.64 Aligned_cols=38 Identities=18% Similarity=0.205 Sum_probs=28.3
Q ss_pred ccCCCcEEEeCCCc-cHHHHHHHHhCCCcEEEEeCChHH
Q 030558 6 WIERRRCIELGSGT-GALAIFLRKAMNLDITTSDYNDQE 43 (175)
Q Consensus 6 ~~~~~~vLDlGcG~-G~~~~~l~~~~~~~v~~~D~s~~~ 43 (175)
.+.|++|.=||.|. |......++.+|.+|++.|.++..
T Consensus 161 ~l~gktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~ 199 (351)
T 3jtm_A 161 DLEGKTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMA 199 (351)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCC
T ss_pred cccCCEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccC
Confidence 35788999999885 655555556668999999987633
No 483
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=72.84 E-value=17 Score=25.87 Aligned_cols=79 Identities=6% Similarity=0.051 Sum_probs=41.9
Q ss_pred cccCCCcEEEeCCCccHHHH----HHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCC------
Q 030558 5 EWIERRRCIELGSGTGALAI----FLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPI------ 74 (175)
Q Consensus 5 ~~~~~~~vLDlGcG~G~~~~----~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 74 (175)
...+++++|=-|++.| ++. .|++. |.+|+++|.++..++ .....+...+. .+..+..+..+....
T Consensus 20 ~m~~~k~~lVTGas~G-IG~aia~~la~~-G~~V~~~~r~~~~~~-~~~~~l~~~~~--~~~~~~~Dv~d~~~v~~~~~~ 94 (279)
T 3sju_A 20 HMSRPQTAFVTGVSSG-IGLAVARTLAAR-GIAVYGCARDAKNVS-AAVDGLRAAGH--DVDGSSCDVTSTDEVHAAVAA 94 (279)
T ss_dssp -----CEEEEESTTSH-HHHHHHHHHHHT-TCEEEEEESCHHHHH-HHHHHHHTTTC--CEEEEECCTTCHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCCH-HHHHHHHHHHHC-CCEEEEEeCCHHHHH-HHHHHHHhcCC--cEEEEECCCCCHHHHHHHHHH
Confidence 4556788888886543 344 34444 889999999987763 33333333222 334444444432110
Q ss_pred ---CCCCccEEEeCCcc
Q 030558 75 ---PNPDWDLILASDIL 88 (175)
Q Consensus 75 ---~~~~fD~i~~~~~l 88 (175)
.-+..|+++.+..+
T Consensus 95 ~~~~~g~id~lv~nAg~ 111 (279)
T 3sju_A 95 AVERFGPIGILVNSAGR 111 (279)
T ss_dssp HHHHHCSCCEEEECCCC
T ss_pred HHHHcCCCcEEEECCCC
Confidence 01367988876654
No 484
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=72.61 E-value=18 Score=25.45 Aligned_cols=78 Identities=9% Similarity=0.034 Sum_probs=44.6
Q ss_pred cCCCcEEEeCCC----ccH-HHHHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCC-------
Q 030558 7 IERRRCIELGSG----TGA-LAIFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPI------- 74 (175)
Q Consensus 7 ~~~~~vLDlGcG----~G~-~~~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 74 (175)
++||++|=-|++ -|. .+..|++. |.+|+.+|.++..+ +.+.+.....+- .+...+..|+.+....
T Consensus 4 l~gK~alVTGaa~~~GIG~aiA~~la~~-Ga~Vvi~~r~~~~~-~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~ 80 (256)
T 4fs3_A 4 LENKTYVIMGIANKRSIAFGVAKVLDQL-GAKLVFTYRKERSR-KELEKLLEQLNQ-PEAHLYQIDVQSDEEVINGFEQI 80 (256)
T ss_dssp CTTCEEEEECCCSTTCHHHHHHHHHHHT-TCEEEEEESSGGGH-HHHHHHHGGGTC-SSCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHC-CCEEEEEECCHHHH-HHHHHHHHhcCC-CcEEEEEccCCCHHHHHHHHHHH
Confidence 578999988853 333 23445555 89999999998876 333333333221 1334445555432110
Q ss_pred --CCCCccEEEeCCc
Q 030558 75 --PNPDWDLILASDI 87 (175)
Q Consensus 75 --~~~~fD~i~~~~~ 87 (175)
.-+..|+++.+..
T Consensus 81 ~~~~G~iD~lvnnAg 95 (256)
T 4fs3_A 81 GKDVGNIDGVYHSIA 95 (256)
T ss_dssp HHHHCCCSEEEECCC
T ss_pred HHHhCCCCEEEeccc
Confidence 1246888887644
No 485
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=72.58 E-value=9.8 Score=27.93 Aligned_cols=31 Identities=19% Similarity=0.045 Sum_probs=21.4
Q ss_pred CcEEEeCCCc-cHH-HHHHHHhCC-CcEEEEeCCh
Q 030558 10 RRCIELGSGT-GAL-AIFLRKAMN-LDITTSDYND 41 (175)
Q Consensus 10 ~~vLDlGcG~-G~~-~~~l~~~~~-~~v~~~D~s~ 41 (175)
.+|.=||+|. |.. +..+++. | .+|+++|.++
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~-G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGR-NAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHc-CCCeEEEEeCCC
Confidence 4688888875 433 3445444 7 7899999997
No 486
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=72.53 E-value=6.3 Score=30.92 Aligned_cols=108 Identities=13% Similarity=0.091 Sum_probs=54.7
Q ss_pred cccCCCcEEEeCCCc-cHHH-HHHHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcce-e-------eccCCCCCCC
Q 030558 5 EWIERRRCIELGSGT-GALA-IFLRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPH-I-------KHSWGDAFPI 74 (175)
Q Consensus 5 ~~~~~~~vLDlGcG~-G~~~-~~l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~ 74 (175)
......+|.=||+|. |... ..+++. |.+|+++|.+++.+ +.++... .......... + .+....+...
T Consensus 4 ~~~~~~~I~VIG~G~vG~~lA~~la~~-G~~V~~~d~~~~~v-~~l~~~~-~~i~e~gl~~~l~~~~~~~~l~~ttd~~~ 80 (478)
T 2y0c_A 4 HHHGSMNLTIIGSGSVGLVTGACLADI-GHDVFCLDVDQAKI-DILNNGG-VPIHEPGLKEVIARNRSAGRLRFSTDIEA 80 (478)
T ss_dssp ---CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHH-HHHHTTC-CSSCCTTHHHHHHHHHHTTCEEEECCHHH
T ss_pred ccCCCceEEEECcCHHHHHHHHHHHhC-CCEEEEEECCHHHH-HHHHCCC-CCcCCCCHHHHHHHhcccCCEEEECCHHH
Confidence 344567899999986 5543 456554 78999999999876 4433221 0000000000 0 0000011100
Q ss_pred CCCCccEEEeCCcc----cCcccchHHHHHHHHHHhhcCCCCcee
Q 030558 75 PNPDWDLILASDIL----LYVKQYSNLIKSLSVLLKSYKPKDSQV 115 (175)
Q Consensus 75 ~~~~fD~i~~~~~l----~~~~~~~~~~~~l~~l~~~l~pgG~~~ 115 (175)
.-...|+|+.+-.- ...++......+++.+.+.++|+..++
T Consensus 81 a~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV 125 (478)
T 2y0c_A 81 AVAHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIV 125 (478)
T ss_dssp HHHHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEE
T ss_pred HhhcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEE
Confidence 01235777764221 011233567788888888898875443
No 487
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=72.12 E-value=0.92 Score=32.84 Aligned_cols=50 Identities=16% Similarity=0.036 Sum_probs=31.4
Q ss_pred CCCCCCccEEEeCCcc-------cCcccch-HHHHHHHHHHhhcCCCCceeeccccCC
Q 030558 73 PIPNPDWDLILASDIL-------LYVKQYS-NLIKSLSVLLKSYKPKDSQVGHLTKNE 122 (175)
Q Consensus 73 ~~~~~~fD~i~~~~~l-------~~~~~~~-~~~~~l~~l~~~l~pgG~~~~~~~~~~ 122 (175)
|..-+.||+|+.+--. ..+++.. .+..+-+...+.|+|||.+++..|+..
T Consensus 206 P~~~grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGyA 263 (324)
T 3trk_A 206 PATLGRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGYA 263 (324)
T ss_dssp CGGGCCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCCC
T ss_pred CCcCCceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeeccc
Confidence 3334799999985221 1122222 234555677889999999999866653
No 488
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=72.09 E-value=16 Score=23.22 Aligned_cols=96 Identities=15% Similarity=0.007 Sum_probs=48.4
Q ss_pred CCCcEEEeCCCccHHHHHHHH---hCCCcEEEEeCCh-HHHHHHHHHHHhhCCCCCCcceeeccCCCCC---CCCCCCcc
Q 030558 8 ERRRCIELGSGTGALAIFLRK---AMNLDITTSDYND-QEIEDNIAYNSTTNGITPALPHIKHSWGDAF---PIPNPDWD 80 (175)
Q Consensus 8 ~~~~vLDlGcG~G~~~~~l~~---~~~~~v~~~D~s~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~fD 80 (175)
.+++|+=+|+| ..+..+++ ..+.+|+++|.++ +.+ +.+..... .+. ..+..+..+.. ...-...|
T Consensus 2 ~~~~vlI~G~G--~vG~~la~~L~~~g~~V~vid~~~~~~~-~~~~~~~~-~~~----~~i~gd~~~~~~l~~a~i~~ad 73 (153)
T 1id1_A 2 RKDHFIVCGHS--ILAINTILQLNQRGQNVTVISNLPEDDI-KQLEQRLG-DNA----DVIPGDSNDSSVLKKAGIDRCR 73 (153)
T ss_dssp CCSCEEEECCS--HHHHHHHHHHHHTTCCEEEEECCCHHHH-HHHHHHHC-TTC----EEEESCTTSHHHHHHHTTTTCS
T ss_pred CCCcEEEECCC--HHHHHHHHHHHHCCCCEEEEECCChHHH-HHHHHhhc-CCC----eEEEcCCCCHHHHHHcChhhCC
Confidence 34568877775 44444333 3378999999974 433 23322211 122 23332222111 01124678
Q ss_pred EEEeCCcccCcccchHHHHHHHHHHhhcCCCCceeec
Q 030558 81 LILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 81 ~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
+|++.-- .......+....+.+.|...++..
T Consensus 74 ~vi~~~~------~d~~n~~~~~~a~~~~~~~~ii~~ 104 (153)
T 1id1_A 74 AILALSD------NDADNAFVVLSAKDMSSDVKTVLA 104 (153)
T ss_dssp EEEECSS------CHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred EEEEecC------ChHHHHHHHHHHHHHCCCCEEEEE
Confidence 8887522 122335666677777776665553
No 489
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=71.97 E-value=5.9 Score=29.85 Aligned_cols=39 Identities=13% Similarity=0.145 Sum_probs=30.6
Q ss_pred ccccCCCcEEEeCCCc-cHHHHHHHHhCCCcEEEEeCChH
Q 030558 4 REWIERRRCIELGSGT-GALAIFLRKAMNLDITTSDYNDQ 42 (175)
Q Consensus 4 ~~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~v~~~D~s~~ 42 (175)
....++++|+=+|+|. |......+++.|.+|+++|.++.
T Consensus 7 ~~~~~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 7 NKLKFGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred ccCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 3456789999999984 76666666777999999998764
No 490
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=71.79 E-value=6.7 Score=27.82 Aligned_cols=41 Identities=7% Similarity=0.274 Sum_probs=30.3
Q ss_pred CccccCCCcEEEeCCCccH---HHHHHHHhCCCcEEEEeCChHHH
Q 030558 3 HREWIERRRCIELGSGTGA---LAIFLRKAMNLDITTSDYNDQEI 44 (175)
Q Consensus 3 ~~~~~~~~~vLDlGcG~G~---~~~~l~~~~~~~v~~~D~s~~~l 44 (175)
.+++++|+++|=-|++.|. .+..|++. |.+|+.+|.+++.+
T Consensus 5 ~~dlf~GK~alVTGas~GIG~aia~~la~~-Ga~Vv~~~~~~~~~ 48 (242)
T 4b79_A 5 QHDIYAGQQVLVTGGSSGIGAAIAMQFAEL-GAEVVALGLDADGV 48 (242)
T ss_dssp CTTTTTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSTTST
T ss_pred CCCCCCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHH
Confidence 4577899999999987754 22344444 89999999988654
No 491
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=71.65 E-value=21 Score=25.77 Aligned_cols=78 Identities=9% Similarity=0.159 Sum_probs=44.8
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhC---CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCC---------
Q 030558 7 IERRRCIELGSGTGALAIFLRKAM---NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPI--------- 74 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~---~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 74 (175)
++++++|=.|++.| ++..+++.+ |.+|+++|.++..+ +.....+...+. .+..+..+..+....
T Consensus 29 l~gk~vlVTGas~g-IG~~la~~l~~~G~~V~~~~r~~~~~-~~~~~~l~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~ 104 (301)
T 3tjr_A 29 FDGRAAVVTGGASG-IGLATATEFARRGARLVLSDVDQPAL-EQAVNGLRGQGF--DAHGVVCDVRHLDEMVRLADEAFR 104 (301)
T ss_dssp STTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHhcCC--ceEEEEccCCCHHHHHHHHHHHHH
Confidence 56788998887644 344433322 88999999999876 333333333222 334444554432110
Q ss_pred CCCCccEEEeCCcc
Q 030558 75 PNPDWDLILASDIL 88 (175)
Q Consensus 75 ~~~~fD~i~~~~~l 88 (175)
.-+..|+++.+..+
T Consensus 105 ~~g~id~lvnnAg~ 118 (301)
T 3tjr_A 105 LLGGVDVVFSNAGI 118 (301)
T ss_dssp HHSSCSEEEECCCC
T ss_pred hCCCCCEEEECCCc
Confidence 01368998887654
No 492
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=71.60 E-value=1.7 Score=33.01 Aligned_cols=37 Identities=16% Similarity=0.003 Sum_probs=27.6
Q ss_pred ccCCCcEEEeCCCc-cHHHHHHHHhCCCcEEEEeCChH
Q 030558 6 WIERRRCIELGSGT-GALAIFLRKAMNLDITTSDYNDQ 42 (175)
Q Consensus 6 ~~~~~~vLDlGcG~-G~~~~~l~~~~~~~v~~~D~s~~ 42 (175)
.+.|++|.=||.|. |......++.+|.+|++.|.++.
T Consensus 173 ~l~gktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~~ 210 (365)
T 4hy3_A 173 LIAGSEIGIVGFGDLGKALRRVLSGFRARIRVFDPWLP 210 (365)
T ss_dssp CSSSSEEEEECCSHHHHHHHHHHTTSCCEEEEECSSSC
T ss_pred ccCCCEEEEecCCcccHHHHHhhhhCCCEEEEECCCCC
Confidence 34688898898885 66555555666899999999763
No 493
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=71.32 E-value=20 Score=24.79 Aligned_cols=77 Identities=8% Similarity=0.142 Sum_probs=43.9
Q ss_pred cCCCcEEEeCCCccHHHHH----HHHhCCCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCC---------C
Q 030558 7 IERRRCIELGSGTGALAIF----LRKAMNLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAF---------P 73 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~----l~~~~~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~ 73 (175)
++++++|=.|++. .++.. +++. |.+|++++.++..+ +.........+. .+..+..+..+.. .
T Consensus 3 l~~k~vlITGas~-gIG~~~a~~l~~~-G~~v~~~~r~~~~~-~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~ 77 (247)
T 3lyl_A 3 LNEKVALVTGASR-GIGFEVAHALASK-GATVVGTATSQASA-EKFENSMKEKGF--KARGLVLNISDIESIQNFFAEIK 77 (247)
T ss_dssp TTTCEEEESSCSS-HHHHHHHHHHHHT-TCEEEEEESSHHHH-HHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCC-hHHHHHHHHHHHC-CCEEEEEeCCHHHH-HHHHHHHHhcCC--ceEEEEecCCCHHHHHHHHHHHH
Confidence 3577888777654 44444 4444 88999999999776 444333433322 3344444443311 0
Q ss_pred CCCCCccEEEeCCcc
Q 030558 74 IPNPDWDLILASDIL 88 (175)
Q Consensus 74 ~~~~~fD~i~~~~~l 88 (175)
...+..|+++.+..+
T Consensus 78 ~~~~~id~li~~Ag~ 92 (247)
T 3lyl_A 78 AENLAIDILVNNAGI 92 (247)
T ss_dssp HTTCCCSEEEECCCC
T ss_pred HHcCCCCEEEECCCC
Confidence 112468998877654
No 494
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=71.18 E-value=24 Score=29.29 Aligned_cols=98 Identities=18% Similarity=0.237 Sum_probs=52.1
Q ss_pred CcEEEeCCCc-c-HHHHHHHHhCCCcEEEEeCChHHHHHHH---HHHHhhC---C-CCC-----CcceeeccCCCCCCCC
Q 030558 10 RRCIELGSGT-G-ALAIFLRKAMNLDITTSDYNDQEIEDNI---AYNSTTN---G-ITP-----ALPHIKHSWGDAFPIP 75 (175)
Q Consensus 10 ~~vLDlGcG~-G-~~~~~l~~~~~~~v~~~D~s~~~l~~~~---~~~~~~~---~-~~~-----~~~~~~~~~~~~~~~~ 75 (175)
++|-=||+|+ | .++..+++. |.+|+.+|.+++.++... ..+.... + ... ....+. ...+.. .
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~a-G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~--~~~d~~-~ 388 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILS-NYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLK--GSLDYE-S 388 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT-TCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEE--EESSSG-G
T ss_pred cEEEEEcCCHhhHHHHHHHHhC-CCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceE--EeCCHH-H
Confidence 4688889886 3 344555554 889999999998763221 1121111 1 000 000111 111111 1
Q ss_pred CCCccEEEeCCcccCcccchHHHHHHHHHHhhcCCCCcee
Q 030558 76 NPDWDLILASDILLYVKQYSNLIKSLSVLLKSYKPKDSQV 115 (175)
Q Consensus 76 ~~~fD~i~~~~~l~~~~~~~~~~~~l~~l~~~l~pgG~~~ 115 (175)
-..-|+|+.+-. ++.+-...+++++...++|+..++
T Consensus 389 ~~~aDlVIeaVp----e~~~vk~~v~~~l~~~~~~~~Ila 424 (725)
T 2wtb_A 389 FRDVDMVIEAVI----ENISLKQQIFADLEKYCPQHCILA 424 (725)
T ss_dssp GTTCSEEEECCC----SCHHHHHHHHHHHHHHSCTTCEEE
T ss_pred HCCCCEEEEcCc----CCHHHHHHHHHHHHhhCCCCcEEE
Confidence 235688887532 223234578888989999886443
No 495
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=70.97 E-value=19 Score=24.91 Aligned_cols=78 Identities=15% Similarity=0.199 Sum_probs=43.8
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhC---CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCC---------
Q 030558 7 IERRRCIELGSGTGALAIFLRKAM---NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPI--------- 74 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~---~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 74 (175)
++++++|=.|++. .++..+++.+ |.+|+++|.++..+ +.........+. .+..+..+..+....
T Consensus 7 ~~~k~vlITGas~-giG~~~a~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~ 82 (253)
T 3qiv_A 7 FENKVGIVTGSGG-GIGQAYAEALAREGAAVVVADINAEAA-EAVAKQIVADGG--TAISVAVDVSDPESAKAMADRTLA 82 (253)
T ss_dssp TTTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHTTC--EEEEEECCTTSHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCC-hHHHHHHHHHHHCCCEEEEEcCCHHHH-HHHHHHHHhcCC--cEEEEEccCCCHHHHHHHHHHHHH
Confidence 4678888888654 3444443332 88999999999876 343333333222 233444444331100
Q ss_pred CCCCccEEEeCCcc
Q 030558 75 PNPDWDLILASDIL 88 (175)
Q Consensus 75 ~~~~fD~i~~~~~l 88 (175)
.-+..|+++.+..+
T Consensus 83 ~~g~id~li~~Ag~ 96 (253)
T 3qiv_A 83 EFGGIDYLVNNAAI 96 (253)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCCCEEEECCCc
Confidence 01368998887654
No 496
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=70.80 E-value=24 Score=24.61 Aligned_cols=35 Identities=20% Similarity=0.116 Sum_probs=24.2
Q ss_pred cCCCcEEEeCCCc-cHHHHHHHHhCCCcEEEEeCCh
Q 030558 7 IERRRCIELGSGT-GALAIFLRKAMNLDITTSDYND 41 (175)
Q Consensus 7 ~~~~~vLDlGcG~-G~~~~~l~~~~~~~v~~~D~s~ 41 (175)
+++++||=+|+|. |.--.......|.+|+.++.+.
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~ 64 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTV 64 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSC
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 4789999999985 3333333333388999998764
No 497
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=70.72 E-value=26 Score=25.07 Aligned_cols=80 Identities=9% Similarity=0.081 Sum_probs=44.3
Q ss_pred cCCCcEEEeCCCccHHHHHHHHhC---CC---cEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCC--------
Q 030558 7 IERRRCIELGSGTGALAIFLRKAM---NL---DITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAF-------- 72 (175)
Q Consensus 7 ~~~~~vLDlGcG~G~~~~~l~~~~---~~---~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 72 (175)
++++++|=.|++.| ++..+++.+ +. +|+.++.+++.++ .+...+........+..+..+..+..
T Consensus 31 l~~k~~lVTGas~G-IG~aia~~l~~~G~~~~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 108 (287)
T 3rku_A 31 LAKKTVLITGASAG-IGKATALEYLEASNGDMKLILAARRLEKLE-ELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIEN 108 (287)
T ss_dssp HTTCEEEEESTTSH-HHHHHHHHHHHHHTTCSEEEEEESCHHHHH-HHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHT
T ss_pred cCCCEEEEecCCCh-HHHHHHHHHHHcCCCCceEEEEECCHHHHH-HHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 56788998887543 354443332 44 8999999998763 33333332211123344445554321
Q ss_pred -CCCCCCccEEEeCCcc
Q 030558 73 -PIPNPDWDLILASDIL 88 (175)
Q Consensus 73 -~~~~~~fD~i~~~~~l 88 (175)
...-+..|+++.+..+
T Consensus 109 ~~~~~g~iD~lVnnAG~ 125 (287)
T 3rku_A 109 LPQEFKDIDILVNNAGK 125 (287)
T ss_dssp SCGGGCSCCEEEECCCC
T ss_pred HHHhcCCCCEEEECCCc
Confidence 1112468998887654
No 498
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=70.57 E-value=14 Score=29.06 Aligned_cols=103 Identities=17% Similarity=0.170 Sum_probs=53.6
Q ss_pred CCcEEEeCCCc-cHHH-HHHHHhCCC-cEEEEeCChH----HHHHHHHHHHhhCCC---CCC----------cceeeccC
Q 030558 9 RRRCIELGSGT-GALA-IFLRKAMNL-DITTSDYNDQ----EIEDNIAYNSTTNGI---TPA----------LPHIKHSW 68 (175)
Q Consensus 9 ~~~vLDlGcG~-G~~~-~~l~~~~~~-~v~~~D~s~~----~l~~~~~~~~~~~~~---~~~----------~~~~~~~~ 68 (175)
-.+|.=||+|. |... ..+++..|. +|+++|.+++ .+ +.++... ... ... ...+. .
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv-~~l~~g~--~~i~~~e~gl~~l~~~~~~~g~l~--~ 92 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKI-EMLNRGE--SPLKGEEPGLEELIGKVVKAGKFE--C 92 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHH-HHHTTTC--CCSSCCGGGHHHHHHHHHHTTCEE--E
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHH-HHHHhcC--CCccccCCCHHHHHHhhcccCCeE--E
Confidence 35688889986 5544 344443267 8999999998 65 3332210 000 000 00011 0
Q ss_pred CCCCCCCCCCccEEEeCCcccCc------ccchHHHHHHHHHHhhcCCCCceeec
Q 030558 69 GDAFPIPNPDWDLILASDILLYV------KQYSNLIKSLSVLLKSYKPKDSQVGH 117 (175)
Q Consensus 69 ~~~~~~~~~~fD~i~~~~~l~~~------~~~~~~~~~l~~l~~~l~pgG~~~~~ 117 (175)
..+ ...-..-|+|+.+-.-... .+...+..+.+.+.+.++||..++..
T Consensus 93 ttd-~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~ 146 (478)
T 3g79_A 93 TPD-FSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLE 146 (478)
T ss_dssp ESC-GGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEEC
T ss_pred eCc-HHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEe
Confidence 111 1111245887764322110 34445677888999999998644443
No 499
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=70.43 E-value=25 Score=24.75 Aligned_cols=79 Identities=10% Similarity=0.108 Sum_probs=44.1
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhC---CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCC--------
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAM---NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPI-------- 74 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~---~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 74 (175)
.+.++++|=.|++ |.++..+++.+ |.+|+++|.++..+ +.........+. .+..+..+..+....
T Consensus 28 ~l~~k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~ 103 (272)
T 1yb1_A 28 SVTGEIVLITGAG-HGIGRLTAYEFAKLKSKLVLWDINKHGL-EETAAKCKGLGA--KVHTFVVDCSNREDIYSSAKKVK 103 (272)
T ss_dssp CCTTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEEcCHHHH-HHHHHHHHhcCC--eEEEEEeeCCCHHHHHHHHHHHH
Confidence 3567888877754 45555544433 78999999998766 333333333222 334444444331100
Q ss_pred -CCCCccEEEeCCcc
Q 030558 75 -PNPDWDLILASDIL 88 (175)
Q Consensus 75 -~~~~fD~i~~~~~l 88 (175)
.-+..|+++.+..+
T Consensus 104 ~~~g~iD~li~~Ag~ 118 (272)
T 1yb1_A 104 AEIGDVSILVNNAGV 118 (272)
T ss_dssp HHTCCCSEEEECCCC
T ss_pred HHCCCCcEEEECCCc
Confidence 12368998876654
No 500
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=70.35 E-value=24 Score=24.47 Aligned_cols=79 Identities=8% Similarity=0.143 Sum_probs=43.6
Q ss_pred ccCCCcEEEeCCCccHHHHHHHHhC---CCcEEEEeCChHHHHHHHHHHHhhCCCCCCcceeeccCCCCCCC--------
Q 030558 6 WIERRRCIELGSGTGALAIFLRKAM---NLDITTSDYNDQEIEDNIAYNSTTNGITPALPHIKHSWGDAFPI-------- 74 (175)
Q Consensus 6 ~~~~~~vLDlGcG~G~~~~~l~~~~---~~~v~~~D~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 74 (175)
.++++++|=.|++. .++..+++.+ |.+|++++.+++.+ +.....+...+. .+..+..+..+....
T Consensus 4 ~l~~k~~lVTGas~-gIG~aia~~l~~~G~~V~~~~r~~~~~-~~~~~~l~~~~~--~~~~~~~Dv~~~~~~~~~~~~~~ 79 (247)
T 2jah_A 4 ALQGKVALITGASS-GIGEATARALAAEGAAVAIAARRVEKL-RALGDELTAAGA--KVHVLELDVADRQGVDAAVASTV 79 (247)
T ss_dssp TTTTCEEEEESCSS-HHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCC-HHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHhcCC--cEEEEECCCCCHHHHHHHHHHHH
Confidence 45778888888654 4454443332 88999999998776 333333332222 233444444332110
Q ss_pred -CCCCccEEEeCCcc
Q 030558 75 -PNPDWDLILASDIL 88 (175)
Q Consensus 75 -~~~~fD~i~~~~~l 88 (175)
.-+..|+++.+..+
T Consensus 80 ~~~g~id~lv~nAg~ 94 (247)
T 2jah_A 80 EALGGLDILVNNAGI 94 (247)
T ss_dssp HHHSCCSEEEECCCC
T ss_pred HHcCCCCEEEECCCC
Confidence 01367988876554
Done!